HHsearch alignment for GI: 254780648 and conserved domain: cd03256
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=96.08 E-value=0.0056 Score=37.85 Aligned_cols=31 Identities=29% Similarity=0.369 Sum_probs=22.7
Q ss_pred EEEEEEEEECEEEEECCCCCCCEEEEEECCC
Q ss_conf 9999976301124421677753035410145
Q gi|254780648|r 152 IWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 (335)
Q Consensus 152 ~~lelk~iaDVglVG~PNaGKSTLln~ls~a 182 (335)
T Consensus 20 isl~i~~Ge~~~iiGpsGsGKSTLl~~i~gl 50 (241)
T cd03256 20 VSLSINPGEFVALIGPSGAGKSTLLRCLNGL 50 (241)
T ss_pred CEEEECCCCEEEEECCCCCHHHHHHHHHHCC
T ss_conf 3889999989999999983399999999749