HHsearch alignment for GI: 254780648 and conserved domain: cd03261
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.22 E-value=0.062 Score=31.53 Aligned_cols=140 Identities=19% Similarity=0.201 Sum_probs=64.8
Q ss_pred EEEEEEEEECEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEECCEE-----------------EEEECCC
Q ss_conf 99999763011244216777530354101454012121100000010266329868-----------------9982264
Q gi|254780648|r 152 IWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-----------------FILADIP 214 (335)
Q Consensus 152 ~~lelk~iaDVglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~~~~~-----------------~~i~D~P 214 (335)
T Consensus 19 isl~i~~Ge~~~iiG~SGsGKSTll~~i~gL-----------~~p~~G~I~~~g~~i~~~~~~~~~~~r~~ig~vfQ~-~ 86 (235)
T cd03261 19 VDLDVRRGEILAIIGPSGSGKSTLLRLIVGL-----------LRPDSGEVLIDGEDISGLSEAELYRLRRRMGMLFQS-G 86 (235)
T ss_pred EEEEECCCCEEEEECCCCCHHHHHHHHHHCC-----------CCCCCCEEEECCEECCCCCHHHHHHHHCCEEEEECC-C
T ss_conf 0648879989999999997299999999759-----------998985899999999989988999975782997049-8
Q ss_pred CCCCC--CCCCCCCHHHHHHH------HHHHHHHHHHCCCCCCCHHHHHHHHHHHHH-------HHHHHHCCCCEEEEEE
Q ss_conf 21247--31167751234433------333578875202222110134666789987-------7766750598899997
Q gi|254780648|r 215 GIIKN--AHQGAGIGDRFLKH------TERTHVLLHIVSALEENVQAAYQCILDELS-------AYNSELRKKIEIVGLS 279 (335)
Q Consensus 215 GlIeg--A~~~~glG~~FLrh------Ier~~vLl~VVD~s~~d~~~~~~~I~~EL~-------~y~~~L~~Kp~IIVlN 279 (335)
T Consensus 87 ~Lf~~lTv~eNv~~~l~~~~~~~~~~~~~r~~~~L~~vgL~~~--~~---~~p~~LSGGq~QRvaIARALv~~P~illlD 161 (235)
T cd03261 87 ALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGA--ED---LYPAELSGGMKKRVALARALALDPELLLYD 161 (235)
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHH--HH---CCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 6589996999999999995799999999999999986799257--64---784106999999999999985489989980
Q ss_pred ----CCCCCCHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf ----46589988999999999986299489998
Q gi|254780648|r 280 ----QIDTVDSDTLARKKNELATQCGQVPFEFS 308 (335)
Q Consensus 280 ----KiDl~~~e~~~~~~~~l~~~~~~~vi~IS 308 (335)
T Consensus 162 EPts~LDp~~~~~i~~li~~l~~~~g~T~i~vT 194 (235)
T cd03261 162 EPTAGLDPIASGVIDDLIRSLKKELGLTSIMVT 194 (235)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEC
T ss_conf 886647989999999999999997299999989