HHsearch alignment for GI: 254780648 and conserved domain: cd04129
>cd04129 Rho2 Rho2 subfamily. Rho2 is a fungal GTPase that plays a role in cell morphogenesis, control of cell wall integrity, control of growth polarity, and maintenance of growth direction. Rho2 activates the protein kinase C homolog Pck2, and Pck2 controls Mok1, the major (1-3) alpha-D-glucan synthase. Together with Rho1 (RhoA), Rho2 regulates the construction of the cell wall. Unlike Rho1, Rho2 is not an essential protein, but its overexpression is lethal. Most Rho proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for proper intracellular localization via membrane attachment. As with other Rho family GTPases, the GDP/GTP cycling is regulated by GEFs (guanine nucleotide exchange factors), GAPs (GTPase-activating proteins) and GDIs (guanine nucleotide dissociation inhibitors).
Probab=99.52 E-value=4.6e-14 Score=105.09 Aligned_cols=162 Identities=17% Similarity=0.191 Sum_probs=107.7
Q ss_pred CEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEECCE--EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 1124421677753035410145401212110000001026632986--89982264212473116775123443333357
Q gi|254780648|r 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 (335)
Q Consensus 161 DVglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~~~~--~~~i~D~PGlIegA~~~~glG~~FLrhIer~~ 238 (335)
T Consensus 3 KivllGd~~VGKTsLi~r~~~~~f-~~~y~pTi~~~~~~~i~v~~~~v~l~iwDTaG~e~----~~~~~~~---~~~~a~ 74 (187)
T cd04129 3 KLVIVGDGACGKTSLLSVFTLGEF-PEEYHPTVFENYVTDCRVDGKPVQLALWDTAGQEE----YERLRPL---SYSKAH 74 (187)
T ss_pred EEEEECCCCCCHHHHHHHHHHCCC-CCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCCC----CCCCCCC---EECCCC
T ss_conf 999999899768999999982989-99878866789899999999999999997888703----4546041---233885
Q ss_pred HHHHHCCCCCCCHHHHHH-HHHHHHHHHHHHHCCCCEEEEEECCCCCCHH-----------HHHHHHHHHHHHCCC-CEE
Q ss_conf 887520222211013466-6789987776675059889999746589988-----------999999999986299-489
Q gi|254780648|r 239 VLLHIVSALEENVQAAYQ-CILDELSAYNSELRKKIEIVGLSQIDTVDSD-----------TLARKKNELATQCGQ-VPF 305 (335)
Q Consensus 239 vLl~VVD~s~~d~~~~~~-~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e-----------~~~~~~~~l~~~~~~-~vi 305 (335)
T Consensus 75 ~~ilvydi~~~~Sf~~~~~~w~~~~~~~~~---~~piilVGnK~DL~~~~~~~~~~~~~r~V~~~~g~~~a~~~~~~~y~ 151 (187)
T cd04129 75 VILIGFAVDTPDSLENVRTKWIEEVRRYCP---NVPVILVGLKKDLRQDAVAKEEYRTQRFVPIQQGKRVAKEIGAKKYM 151 (187)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHHCC---CCCEEEEEECCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCEEE
T ss_conf 899970269866799999999999998587---99889998860011341121112231557899999999984997899
Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 9988878899999999999998545230
Q gi|254780648|r 306 EFSSITGHGIPQILECLHDKIFSIRGEN 333 (335)
Q Consensus 306 ~ISA~tg~GI~eL~~~I~e~L~~~r~e~ 333 (335)
T Consensus 152 EtSAk~~~nV~e~F~~~~r~~l~~~~~~ 179 (187)
T cd04129 152 ECSALTGEGVDDVFEAATRAALLVRKSE 179 (187)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 9688999798999999999997520368