HHsearch alignment for GI: 254780648 and conserved domain: cd04143

>cd04143 Rhes_like Rhes_like subfamily. This subfamily includes Rhes (Ras homolog enriched in striatum) and Dexras1/AGS1 (activator of G-protein signaling 1). These proteins are homologous, but exhibit significant differences in tissue distribution and subcellular localization. Rhes is found primarily in the striatum of the brain, but is also expressed in other areas of the brain, such as the cerebral cortex, hippocampus, inferior colliculus, and cerebellum. Rhes expression is controlled by thyroid hormones. In rat PC12 cells, Rhes is farnesylated and localizes to the plasma membrane. Rhes binds and activates PI3K, and plays a role in coupling serpentine membrane receptors with heterotrimeric G-protein signaling. Rhes has recently been shown to be reduced under conditions of dopamine supersensitivity and may play a role in determining dopamine receptor sensitivity. Dexras1/AGS1 is a dexamethasone-induced Ras protein that is expressed primarily in the brain, with low expression l
Probab=99.48  E-value=6.2e-14  Score=104.29  Aligned_cols=151  Identities=13%  Similarity=0.130  Sum_probs=102.4

Q ss_pred             EEEEECCCCCCCEEEEEECCC------CCHHHHHHHCCCEECCEEEEECC--EEEEEECCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             124421677753035410145------40121211000000102663298--6899822642124731167751234433
Q gi|254780648|r  162 IGIIGLPNAGKSTFLASVTRA------KPKIADYPFTTLYPNLGIVKEGY--KEFILADIPGIIKNAHQGAGIGDRFLKH  233 (335)
Q Consensus       162 VglVG~PNaGKSTLln~ls~a------k~kIa~ypFTT~~P~lGvv~~~~--~~~~i~D~PGlIegA~~~~glG~~FLrh  233 (335)
T Consensus         3 IvvlGdsgVGKTSLi~Rf~~~~F~~~y~pTi~d--~~~-----k~i~i~g~~v~L~IwDTaGqe----~f~sl~~~---y   68 (247)
T cd04143           3 MVVLGASKVGKTAIVSRFLGGRFEEQYTPTIED--FHR-----KLYSIRGEVYQLDILDTSGNH----PFPAMRRL---S   68 (247)
T ss_pred             EEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHH--EEE-----EEEEECCEEEEEEEEECCCCC----CCCCCHHH---H
T ss_conf             999998997899999999649689987888353--188-----999999999999999676653----68744201---3


Q ss_pred             HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH-------HHHCCCCEEEEEECCCCCCHHHHH-HHHHHH-HHHCCCCE
Q ss_conf             333578875202222110134666789987776-------675059889999746589988999-999999-98629948
Q gi|254780648|r  234 TERTHVLLHIVSALEENVQAAYQCILDELSAYN-------SELRKKIEIVGLSQIDTVDSDTLA-RKKNEL-ATQCGQVP  304 (335)
Q Consensus       234 Ier~~vLl~VVD~s~~d~~~~~~~I~~EL~~y~-------~~L~~Kp~IIVlNKiDl~~~e~~~-~~~~~l-~~~~~~~v  304 (335)
T Consensus        69 ~~~a~~~IlVYDITnr~SFe~v~~w~~~I~e~k~~~~~~~~~~~~vpiiLVGNK~DL~~~R~Vs~eEa~~~~A~~~~~~f  148 (247)
T cd04143          69 ILTGDVFILVFSLDNRESFEEVCRLREQILETKSCLKNKTKENVKIPMVICGNKADRDFPREVQRDEVEQLVGGDENCAY  148 (247)
T ss_pred             HHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHCCCCCHHHHHHHHHHHCCCEE
T ss_conf             12177899999799878999899999999986400100135788875899866554320178799999999997689879


Q ss_pred             EEEECCCCCCHHHHHHHHHHHH
Q ss_conf             9998887889999999999999
Q gi|254780648|r  305 FEFSSITGHGIPQILECLHDKI  326 (335)
Q Consensus       305 i~ISA~tg~GI~eL~~~I~e~L  326 (335)
T Consensus       149 ~EtSAKt~~NV~E~F~~L~~~~  170 (247)
T cd04143         149 FEVSAKKNSNLDEMFRALFSLA  170 (247)
T ss_pred             EECCCCCCCCHHHHHHHHHHHC
T ss_conf             9887899949899999999854