HHsearch alignment for GI: 254780648 and conserved domain: pfam00025
>pfam00025 Arf ADP-ribosylation factor family. Pfam combines a number of different Prosite families together
Probab=99.86 E-value=9.9e-22 Score=151.57 Aligned_cols=154 Identities=21% Similarity=0.183 Sum_probs=105.0
Q ss_pred EEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 12442167775303541014540121211000000102663298689982264212473116775123443333357887
Q gi|254780648|r 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 (335)
Q Consensus 162 VglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~~~~~~~i~D~PGlIegA~~~~glG~~FLrhIer~~vLl 241 (335)
T Consensus 17 i~llG~~~vGKTsll~~~~~~~~--~~-~~pTig~~~~~v~~~~~~~~iwDt~Gqe~----~~~~~~---~y~~~a~~ii 86 (174)
T pfam00025 17 ILILGLDNAGKTTILYKLKLGEI--VT-TIPTIGFNVETVTYKNVKFTVWDVGGQES----LRPLWR---NYFPNTDAVI 86 (174)
T ss_pred EEEECCCCCCHHHHHHHHHCCCC--CC-CCCCCCCEEEEEEECCEEEEEEECCCCCC----CCHHHH---HHHCCCCEEE
T ss_conf 99999999988999999954998--87-44746823899998999999982798702----326799---8841782689
Q ss_pred HHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH----HHCCCCEEEEECCCCCCHHH
Q ss_conf 52022221101346667899877766750598899997465899889999999999----86299489998887889999
Q gi|254780648|r 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA----TQCGQVPFEFSSITGHGIPQ 317 (335)
Q Consensus 242 ~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l~----~~~~~~vi~ISA~tg~GI~e 317 (335)
T Consensus 87 ~V~D~t~~~s~~~~~~~l~~~l~-~~~~~~~piliv~NK~DL~~~~~~~ei~~~~~~~~~~~~~~~~~~~SAktG~gI~e 165 (174)
T pfam00025 87 FVVDSADRDRIEEAKEELHALLN-EEELADAPLLILANKQDLPGAMSEAEIRELLGLHELKSRPWEIQGCSAVTGEGLDE 165 (174)
T ss_pred EEEECCCHHHHHHHHHHHHHHHH-HHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHH
T ss_conf 99867867879999999999875-42358970899872566767899999999997864417996899998867959899
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780648|r 318 ILECLHDKI 326 (335)
Q Consensus 318 L~~~I~e~L 326 (335)
T Consensus 166 ~f~~L~~~I 174 (174)
T pfam00025 166 GLDWLSNYI 174 (174)
T ss_pred HHHHHHHHC
T ss_conf 999999539