HHsearch alignment for GI: 254780648 and conserved domain: pfam01926
>pfam01926 MMR_HSR1 GTPase of unknown function.
Probab=99.76 E-value=2.8e-19 Score=136.67 Aligned_cols=104 Identities=38% Similarity=0.546 Sum_probs=85.9
Q ss_pred CCCEEEEEECCC-CCHHHHHHHCCCEECCEEEEECCEEEEEECCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 753035410145-4012121100000010266329868998226421247311677-51234433333578875202222
Q gi|254780648|r 171 GKSTFLASVTRA-KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAG-IGDRFLKHTERTHVLLHIVSALE 248 (335)
Q Consensus 171 GKSTLln~ls~a-k~kIa~ypFTT~~P~lGvv~~~~~~~~i~D~PGlIegA~~~~g-lG~~FLrhIer~~vLl~VVD~s~ 248 (335)
T Consensus 1 GKSsLiN~L~~~~~~~v~~~~gtT~~~~~~~~~~~~~~i~liDTPGi~~~~~~~~~~~~~~~~~~~~~~d~il~viD~~~ 80 (106)
T pfam01926 1 GKSTLINALTGKKRAIVSDYPGTTRDPNEGRVELDGKQIILVDTPGIIEGASKGEGELGNRTLEAIEEADLILHVVDASE 80 (106)
T ss_pred CHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCC
T ss_conf 91279999978885555288998846355899889988999837873226504678889999972345737999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf 11013466678998777667505988999974
Q gi|254780648|r 249 ENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 (335)
Q Consensus 249 ~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNK 280 (335)
T Consensus 81 ~~~~~d~~~~-~~l~~-----~~~p~iiv~NK 106 (106)
T pfam01926 81 GLTEEDLEIL-DLLLE-----LGKPVILVLNK 106 (106)
T ss_pred CCCHHHHHHH-HHHHH-----CCCCEEEEEEC
T ss_conf 9998999999-99998-----69988999939