HHsearch alignment for GI: 254780648 and conserved domain: pfam04548
>pfam04548 AIG1 AIG1 family. Arabidopsis protein AIG1 appears to be involved in plant resistance to bacteria.
Probab=98.84 E-value=1.6e-08 Score=71.56 Aligned_cols=159 Identities=18% Similarity=0.108 Sum_probs=98.5
Q ss_pred EEEEECCCCCCCEEEEEECCCCCHHH--HHHHCCCEECCEEEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH--
Q ss_conf 12442167775303541014540121--21100000010266329868998226421247311677512344333335--
Q gi|254780648|r 162 IGIIGLPNAGKSTFLASVTRAKPKIA--DYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT-- 237 (335)
Q Consensus 162 VglVG~PNaGKSTLln~ls~ak~kIa--~ypFTT~~P~lGvv~~~~~~~~i~D~PGlIegA~~~~glG~~FLrhIer~-- 237 (335)
T Consensus 3 ivLlGktG~GKSstgNtILG~~~F~s~~~~~~vT~~c~~~~~~~~gr~v~ViDTPgl~~~~~~~----~~~~~ei~~~~~ 78 (200)
T pfam04548 3 IVLVGKTGNGKSATGNSILGRKAFESKLRAQGVTKTCQLVSRTWDGRIINVIDTPGLFDLSVSN----DFISKEIIRCLL 78 (200)
T ss_pred EEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEEECCCCCCCCCCH----HHHHHHHHHHHH
T ss_conf 9997999984365576617975335789888874136899999899689999786635767786----999999999998
Q ss_pred ------HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHH-----HHHHHCCCCEEE
Q ss_conf ------788752022221101346667899877766750598899997465899889999999-----999862994899
Q gi|254780648|r 238 ------HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN-----ELATQCGQVPFE 306 (335)
Q Consensus 238 ------~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~-----~l~~~~~~~vi~ 306 (335)
T Consensus 79 l~~pGpHa~LLVi~~~-rfT~ee~~~v~~i~~~FGe~~~-~~tIVLFT~~D~L~~~si~~~i~~~~~~~Lq~li~~---~ 153 (200)
T pfam04548 79 LAEPGPHAVLLVLSLG-RFTEEEEQALRTLQELFGSKIL-DYMIVVFTRKDDLEDDSLDDYLSDGCPEFLKEVLRT---A 153 (200)
T ss_pred HCCCCCCEEEEEEECC-CCCHHHHHHHHHHHHHHHHHHH-HHEEEEEECHHHCCCCCHHHHHHHCCHHHHHHHHHH---C
T ss_conf 5589985799998668-8888999999999999757868-009999978021499979999872273999999987---7
Q ss_pred EECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 98887889999999999999854
Q gi|254780648|r 307 FSSITGHGIPQILECLHDKIFSI 329 (335)
Q Consensus 307 ISA~tg~GI~eL~~~I~e~L~~~ 329 (335)
T Consensus 154 ~~~~~~~QV~eLL~kIe~mv~eN 176 (200)
T pfam04548 154 DGEEKEEQVQQLLALVEAIVKEN 176 (200)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 88545799999999999999974