HHsearch alignment for GI: 254780648 and conserved domain: pfam09439
>pfam09439 SRPRB Signal recognition particle receptor beta subunit. The beta subunit of the signal recognition particle receptor (SRP) is a transmembrane GTPase which anchors the alpha subunit to the endoplasmic reticulum membrane.
Probab=99.31 E-value=1.4e-12 Score=96.17 Aligned_cols=121 Identities=19% Similarity=0.271 Sum_probs=74.3
Q ss_pred CEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEE--EEECCEEEEEECCCCCCCCCCCCCCCHHHHH---HHHH
Q ss_conf 1124421677753035410145401212110000001026--6329868998226421247311677512344---3333
Q gi|254780648|r 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--VKEGYKEFILADIPGIIKNAHQGAGIGDRFL---KHTE 235 (335)
Q Consensus 161 DVglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGv--v~~~~~~~~i~D~PGlIegA~~~~glG~~FL---rhIe 235 (335)
T Consensus 5 tvLllGl~~sGKT~Lf~~L~~~~~~-~--T~tS~~~n~~~~~~~~~~~~~~lvD~PGh-----~k--lR~~~~~~~~~~~ 74 (181)
T pfam09439 5 AVIIAGLCDSGKTSLFTLLTTGSVR-K--TVTSQEPSAAYKYMNNKGNSLTLIDFPGH-----VK--LRYKLLETLKDSS 74 (181)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCC-C--EECCCCCCCEEEEECCCCCEEEEEECCCC-----HH--HHHHHHHHHHHHC
T ss_conf 6999868999899999999759948-7--58886786406875168966899988996-----89--9999998643002
Q ss_pred HHHHHHHHCCCCC-C-CHHHHHHHHHHHHHHHHHHHC--CCCEEEEEECCCCCCHHHHHHHH
Q ss_conf 3578875202222-1-101346667899877766750--59889999746589988999999
Q gi|254780648|r 236 RTHVLLHIVSALE-E-NVQAAYQCILDELSAYNSELR--KKIEIVGLSQIDTVDSDTLARKK 293 (335)
Q Consensus 236 r~~vLl~VVD~s~-~-d~~~~~~~I~~EL~~y~~~L~--~Kp~IIVlNKiDl~~~e~~~~~~ 293 (335)
T Consensus 75 ~~~gIVfVVDS~~~~~~l~~~Ae~Ly~iL~--~~~~~~~~vPvLI~cNKqDl~~A~~~~~Ik 134 (181)
T pfam09439 75 SLRGLVFVVDSTAFPKEVTDTAEFLYDILS--ITELLKNGIDILIACNKQEIFTARPPKKIK 134 (181)
T ss_pred CCEEEEEEEECCCCHHHHHHHHHHHHHHHH--CHHHCCCCCCEEEEEECCCCCCCCCHHHHH
T ss_conf 644999999786656679999999999984--454336899789997374633577999999