HHsearch alignment for GI: 254780648 and conserved domain: smart00053
>smart00053 DYNc Dynamin, GTPase. Large GTPases that mediate vesicle trafficking. Dynamin participates in the endocytic uptake of receptors, associated ligands, and plasma membrane following an exocytic event.
Probab=98.14 E-value=1.6e-06 Score=59.43 Aligned_cols=77 Identities=18% Similarity=0.220 Sum_probs=45.3
Q ss_pred EEEEECCCCCCCCCCCCCCCHHHH------HHHHHHHH-HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 899822642124731167751234------43333357-88752022221101346667899877766750598899997
Q gi|254780648|r 207 EFILADIPGIIKNAHQGAGIGDRF------LKHTERTH-VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 (335)
Q Consensus 207 ~~~i~D~PGlIegA~~~~glG~~F------LrhIer~~-vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlN 279 (335)
T Consensus 126 ~LTlvDLPGl~~~~~~~q~~~~~~~v~~lv~~Yi~~p~tIILaVv~a~~D-~an--q~~l~lAr~~Dp~--g~RTiGVlT 200 (240)
T smart00053 126 NLTLIDLPGITKVAVGDQPPDIEEQIKDMIKQFISKEECLILAVTPANVD-LAN--SDALKLAKEVDPQ--GERTIGVIT 200 (240)
T ss_pred CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC-HHH--HHHHHHHHHHCCC--CCEEEEEEC
T ss_conf 85441475412467899856799999999999847988069998407856-766--1999999971999--982899973
Q ss_pred CCCCCCHHH
Q ss_conf 465899889
Q gi|254780648|r 280 QIDTVDSDT 288 (335)
Q Consensus 280 KiDl~~~e~ 288 (335)
T Consensus 201 KpDl~~~gs 209 (240)
T smart00053 201 KLDLMDEGT 209 (240)
T ss_pred CCCCCCCCC
T ss_conf 533457770