HHsearch alignment for GI: 254780648 and conserved domain: smart00176

>smart00176 RAN Ran (Ras-related nuclear proteins) /TC4 subfamily of small GTPases. Ran is involved in the active transport of proteins through nuclear pores.
Probab=99.55  E-value=9e-15  Score=109.38  Aligned_cols=149  Identities=13%  Similarity=0.112  Sum_probs=106.5

Q ss_pred             EECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEE------EEECC--EEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             421677753035410145401212110000001026------63298--6899822642124731167751234433333
Q gi|254780648|r  165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI------VKEGY--KEFILADIPGIIKNAHQGAGIGDRFLKHTER  236 (335)
Q Consensus       165 VG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGv------v~~~~--~~~~i~D~PGlIegA~~~~glG~~FLrhIer  236 (335)
T Consensus         1 vGD~gVGKTsli~R~~~~~F~------~~y~pTiGvd~~~~~~~~~~~~i~l~iWDTAGqE----~f~sl~~~---yyr~   67 (200)
T smart00176        1 VGDGGTGKTTFVKRHLTGEFE------KKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE----KFGGLRDG---YYIQ   67 (200)
T ss_pred             CCCCCCCHHHHHHHHHCCCCC------CCCCCCEEEEEEEEEEEECCEEEEEEEEECCCCC----CCCCCCHH---HCCC
T ss_conf             989887899999999409999------9978871489899999989989999999898870----00110265---5057


Q ss_pred             HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHH
Q ss_conf             57887520222211013466678998777667505988999974658998899999999998629948999888788999
Q gi|254780648|r  237 THVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIP  316 (335)
Q Consensus       237 ~~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l~~~~~~~vi~ISA~tg~GI~  316 (335)
T Consensus        68 a~~~IlvfDvt~~~SF~~l~~W~~~l~~~~~---~ipiiLvGNK~DL~~r~V~-~e~~~~a~~~~~~y~EtSAKt~~Nv~  143 (200)
T smart00176       68 GQCAIIMFDVTARVTYKNVPNWHRDLVRVCE---NIPIVLCGNKVDVKDRKVK-AKSITFHRKKNLQYYDISAKSNYNFE  143 (200)
T ss_pred             CCEEEEEEECCCHHHHHHHHHHHHHHHHHCC---CCCEEEEEECCCCCCCCCC-HHHHHHHHHCCCCEEEEECCCCCCHH
T ss_conf             8788999635877899989999999998579---9988999988757404365-99999999879978983004696979


Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             99999999998545
Q gi|254780648|r  317 QILECLHDKIFSIR  330 (335)
Q Consensus       317 eL~~~I~e~L~~~r  330 (335)
T Consensus       144 e~F~~Lar~L~~~~  157 (200)
T smart00176      144 KPFLWLARKLIGDP  157 (200)
T ss_pred             HHHHHHHHHHHCCC
T ss_conf             99999999983899