BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780648|ref|YP_003065061.1| GTPase ObgE [Candidatus Liberibacter asiaticus str. psy62] (335 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780648|ref|YP_003065061.1| GTPase ObgE [Candidatus Liberibacter asiaticus str. psy62] gi|254040325|gb|ACT57121.1| GTPase ObgE [Candidatus Liberibacter asiaticus str. psy62] Length = 335 Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/335 (100%), Positives = 335/335 (100%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR Sbjct: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG Sbjct: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT Sbjct: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL Sbjct: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC Sbjct: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 GQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF Sbjct: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 >gi|315122166|ref|YP_004062655.1| GTPase ObgE [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495568|gb|ADR52167.1| GTPase ObgE [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 331 Score = 566 bits (1460), Expect = e-159, Method: Compositional matrix adjust. Identities = 288/330 (87%), Positives = 308/330 (93%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGD+WI+A +NLNTL+D+R Sbjct: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDIWIKAINNLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKAQ G KGMKRNR+GAKG DVVLTVPVGTQVFEED SLICDLDQEGQ ++LAPG Sbjct: 61 YQQHFKAQSGTKGMKRNRTGAKGSDVVLTVPVGTQVFEEDRTSLICDLDQEGQCVLLAPG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKSSTNQ+P YAN GI GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT Sbjct: 121 GNGGFGNLHFKSSTNQSPRYANLGIPGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RAKPKIADYPFTTLYPNLGI K GY+EF+LADIPGIIKNAH+GAGIGDRFLKHTERT++L Sbjct: 181 RAKPKIADYPFTTLYPNLGIAKVGYEEFVLADIPGIIKNAHKGAGIGDRFLKHTERTYIL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LHI+SALEEN+Q AYQ IL EL +YNSELR+KIEIVGLSQIDTVDSDTL RKKNELA+ C Sbjct: 241 LHIISALEENIQEAYQSILHELHSYNSELRQKIEIVGLSQIDTVDSDTLIRKKNELASIC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIR 330 GQ+PF FSSITG GIPQILECLHDKI SIR Sbjct: 301 GQMPFAFSSITGSGIPQILECLHDKIVSIR 330 >gi|86359645|ref|YP_471537.1| GTPase ObgE [Rhizobium etli CFN 42] gi|123510427|sp|Q2K2X6|OBG_RHIEC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|86283747|gb|ABC92810.1| probable GTP-binding protein [Rhizobium etli CFN 42] Length = 363 Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust. Identities = 226/332 (68%), Positives = 263/332 (79%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGGAG +SFRREKFIEFGGPDGG GGRGGDVW++A + LNTLIDFR Sbjct: 1 MKFLDEAKVYIRSGDGGAGSVSFRREKFIEFGGPDGGDGGRGGDVWVEAVNGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA G GM RNR+GA G DV L VPVGTQ+FEED ++ICDL +EGQR LA G Sbjct: 61 YQQHFKATIGTHGMGRNRTGANGSDVTLKVPVGTQIFEEDRETMICDLTEEGQRYCLAHG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFK+S NQAP +ANPG+ G+EK IWL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNAHFKTSVNQAPDWANPGLPGEEKTIWLRLKLIADAGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIA+YPFTTL+PNLG+ +EFILADIPG+I+ AH+G GIGDRFL H ERT VL Sbjct: 181 RARPKIANYPFTTLHPNLGVATVDEREFILADIPGLIEGAHEGVGIGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE V AY+ + EL AY +EL K EIV LSQID +D L +K ELA C Sbjct: 241 LHLVSAQEEKVGKAYKTVKHELEAYGNELTDKPEIVALSQIDVLDEAELKKKTKELAKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G+ PF+ S++TG G+ ++L L D I E Sbjct: 301 GRTPFQISAVTGRGMTEVLRALRDIIVQENAE 332 >gi|190893919|ref|YP_001980461.1| GTP-binding protein [Rhizobium etli CIAT 652] gi|261277694|sp|B3PRZ3|OBG_RHIE6 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|190699198|gb|ACE93283.1| probable GTP-binding protein [Rhizobium etli CIAT 652] Length = 362 Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust. Identities = 226/334 (67%), Positives = 263/334 (78%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGGAG +SFRREKFIEFGGPDGG GGRGGDVW++ + LNTLIDFR Sbjct: 1 MKFLDEAKVYIRSGDGGAGSVSFRREKFIEFGGPDGGDGGRGGDVWVETVNGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA G GM RNR+GA G DV L VPVGTQ+FEED +LICDL EGQR LA G Sbjct: 61 YQQHFKATIGTHGMGRNRTGANGSDVTLKVPVGTQIFEEDRETLICDLTVEGQRYCLAHG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFK+STNQAP +ANPG+ G+EK IWL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNAHFKTSTNQAPDWANPGLPGEEKTIWLRLKLIADAGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIA+YPFTTL+PNLG+ +EFILADIPG+I+ AH+G GIGDRFL H ERT VL Sbjct: 181 RARPKIANYPFTTLHPNLGVATIDEREFILADIPGLIEGAHEGVGIGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE V AY+ + EL AY ++L K EIV LSQID +D L +K ELA C Sbjct: 241 LHLVSAQEEKVGKAYKTVKHELEAYGNDLTDKPEIVALSQIDVLDEAELKKKTKELAKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 G+ PF+ S++TG G+ ++L L D I E + Sbjct: 301 GKTPFQISAVTGRGMTEVLRALRDVIVEENAEEK 334 >gi|116254405|ref|YP_770243.1| GTPase ObgE [Rhizobium leguminosarum bv. viciae 3841] gi|261277695|sp|Q1MA76|OBG_RHIL3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|115259053|emb|CAK10164.1| putative GTP-binding protein [Rhizobium leguminosarum bv. viciae 3841] Length = 364 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 225/334 (67%), Positives = 262/334 (78%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYI+SGDGG G +SFRREKFIEFGGPDGG GGRGGDVW++A + LNTLIDFR Sbjct: 1 MKFLDEAKVYIKSGDGGGGSVSFRREKFIEFGGPDGGDGGRGGDVWVEAVNGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA G GM RNR+GA G DV L VPVGTQ+FEED +LICDL EGQR LA G Sbjct: 61 YQQHFKATIGTHGMGRNRTGANGSDVTLKVPVGTQIFEEDQETLICDLTVEGQRYCLAHG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFK+STNQAP +ANPG+ G+EK IWL LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNAHFKTSTNQAPDWANPGLPGEEKTIWLHLKLIADAGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIA+YPFTTL+PNLG+ +EFILADIPG+I+ AH+G GIGDRFL H ERT VL Sbjct: 181 RARPKIANYPFTTLHPNLGVATIDEREFILADIPGLIEGAHEGVGIGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++SA EE V AY+ + EL AY +EL K EIV LSQID +D L +K ELA C Sbjct: 241 LHLISAQEEKVGKAYKTVKHELEAYGNELTDKAEIVALSQIDVLDDAELKKKTKELAKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 G+ PF+ S++TG G+ ++L L D I E + Sbjct: 301 GKTPFQISAVTGKGMTEVLRALRDIIVEANTEEK 334 >gi|209551445|ref|YP_002283362.1| GTPase ObgE [Rhizobium leguminosarum bv. trifolii WSM2304] gi|261277696|sp|B5ZUE3|OBG_RHILW RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|209537201|gb|ACI57136.1| GTP-binding protein Obg/CgtA [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 364 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 223/334 (66%), Positives = 262/334 (78%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGG G +SFRREKFIEFGGPDGG GGRGGDVW++ + LNTLIDFR Sbjct: 1 MKFLDEAKVYIRSGDGGGGSVSFRREKFIEFGGPDGGDGGRGGDVWVETVNGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +QQHFKA G GM RNR+GA G DV L VPVGTQ+FEED +LICDL EGQR LA G Sbjct: 61 FQQHFKATIGTHGMGRNRTGANGSDVTLKVPVGTQIFEEDRETLICDLTVEGQRYCLAHG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFK+STNQAP +ANPG+ G+EK +WL+LKLIAD G++G+PNAGKSTFLASVT Sbjct: 121 GNGGFGNAHFKTSTNQAPDWANPGLPGEEKTLWLRLKLIADAGLVGMPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIA+YPFTTL+PNLG+ +EFILADIPG+I+ AH+G GIGDRFL H ERT VL Sbjct: 181 RARPKIANYPFTTLHPNLGVATIDEREFILADIPGLIEGAHEGVGIGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE V AY+ + EL AY +EL K EIV LSQID +D L +K ELA C Sbjct: 241 LHLVSAQEEKVGKAYKTVKHELEAYGNELTDKPEIVALSQIDVLDEAELKKKTKELAKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 G+ PF+ S++TG G+ ++L L D I E + Sbjct: 301 GKTPFQISAVTGKGMTEVLRALRDIIVEENAEEK 334 >gi|163761373|ref|ZP_02168447.1| putative gtp-binding protein [Hoeflea phototrophica DFL-43] gi|162281368|gb|EDQ31665.1| putative gtp-binding protein [Hoeflea phototrophica DFL-43] Length = 367 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 210/335 (62%), Positives = 256/335 (76%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDE KVYIR+GDGG G ISF REKFIEFGGPDGG GGRGGDVW++A LNTLIDFR Sbjct: 24 MKFLDETKVYIRAGDGGGGAISFHREKFIEFGGPDGGDGGRGGDVWVEAVDGLNTLIDFR 83 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +QQH KA+ G GM RNR+GA G + L VP GTQVFEED +L+CDL G+R +A G Sbjct: 84 FQQHHKAKTGVHGMGRNRTGANGASITLKVPAGTQVFEEDNETLVCDLTTVGERYRIAKG 143 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFK++TNQAP +ANPG+ G+EK +WL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 144 GNGGFGNAHFKTATNQAPRHANPGLAGEEKTVWLRLKLIADAGLVGLPNAGKSTFLASVT 203 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIA+YPFTTL+PNLG+ +EF+LADIPG+I+ AH+G GIGDRFL H ERT VL Sbjct: 204 RARPKIANYPFTTLHPNLGVATIDNREFVLADIPGLIEGAHEGVGIGDRFLGHVERTRVL 263 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSALEE+V AY+ + EL AY + +K E+V LSQ+D +D++T A K L Sbjct: 264 LHLVSALEEDVAEAYRVVRHELEAYGHGIAEKPEVVALSQVDVLDAETRAEKVRALKKAA 323 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 G+ P+E S+ITG G+ L L D I R + + Sbjct: 324 GRAPYELSAITGEGMTGALRALRDVIVKDRADQDI 358 >gi|241206882|ref|YP_002977978.1| GTPase ObgE [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860772|gb|ACS58439.1| GTP-binding protein Obg/CgtA [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 364 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 221/334 (66%), Positives = 262/334 (78%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYI+SGDGG G +SFRREKFIEFGGPDGG GGRGGDVW++ + LNTLIDFR Sbjct: 1 MKFLDEAKVYIKSGDGGGGSVSFRREKFIEFGGPDGGDGGRGGDVWVETVNGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +QQHFKA G GM RNR+GA G DV L VPVGTQ+FEED +LICDL EGQR LA G Sbjct: 61 FQQHFKATIGTHGMGRNRTGANGSDVTLKVPVGTQIFEEDQETLICDLTVEGQRYCLAHG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFK+STNQAP +ANPG+ G+EK IWL+LKLIAD G++G+PNAGKSTFLASVT Sbjct: 121 GNGGFGNAHFKTSTNQAPDWANPGLPGEEKTIWLRLKLIADAGLVGMPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIA+YPFTTL+PNLG+ +EFILADIPG+I+ AH+G GIGDRFL H ERT VL Sbjct: 181 RARPKIANYPFTTLHPNLGVATIDEREFILADIPGLIEGAHEGVGIGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++SA EE V AY+ + EL AY ++L K EIV LSQID +D L +K ELA C Sbjct: 241 LHLISAQEEKVGKAYKTVKHELEAYGNDLTDKAEIVALSQIDVLDDAELKKKTKELAKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 G+ PF+ S++TG G+ ++L L D I E + Sbjct: 301 GKTPFQISAVTGKGMTEVLRALRDIIVEANTEEK 334 >gi|13473421|ref|NP_104988.1| GTPase ObgE [Mesorhizobium loti MAFF303099] gi|81779182|sp|Q98EZ3|OBG_RHILO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|14024170|dbj|BAB50774.1| GTP-binding protein [Mesorhizobium loti MAFF303099] Length = 343 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 213/332 (64%), Positives = 255/332 (76%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVY+RSGDGGAG +SFRREKFIEFGGPDGG GGRGGDVW++A LNTLID+R Sbjct: 1 MKFLDQAKVYVRSGDGGAGSVSFRREKFIEFGGPDGGDGGRGGDVWLEAVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RN +GAKG DV L VP GTQVFEED +LICDL GQR +LA G Sbjct: 61 YQQHFKAKTGVHGMGRNMTGAKGADVTLKVPAGTQVFEEDNETLICDLTVVGQRFLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFK+STNQAP ANPG+ G+E IWL+LKLIAD G++GLPNAGKSTFLA+VT Sbjct: 121 GNGGFGNQHFKTSTNQAPRRANPGLPGEELNIWLRLKLIADAGLVGLPNAGKSTFLAAVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+ + +EF++ADIPG+I+ AH+G GIGDRFL H ERT VL Sbjct: 181 AAKPKIADYPFTTLHPGLGVARIDAREFVIADIPGLIEGAHEGVGIGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EEN AY+ + EL AY + L +K+EI+ LSQ+DT+D+D +K L Sbjct: 241 LHLVSAQEENPGKAYKTVRAELDAYGNGLIEKVEILALSQVDTLDADARRKKVASLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G+ P S++TG G+ +L L I R E Sbjct: 301 GRAPMLLSAVTGEGVEAVLRALMTVIAEARAE 332 >gi|222087876|ref|YP_002546414.1| GTP-binding protein Obg/CgtA [Agrobacterium radiobacter K84] gi|261266637|sp|B9JER1|OBG_AGRRK RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|221725324|gb|ACM28480.1| GTP-binding protein Obg/CgtA [Agrobacterium radiobacter K84] Length = 371 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 226/331 (68%), Positives = 266/331 (80%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVYI+SGDGGAG +SFRREKFIEFGGPDGG GGRGGDVW++A + LNTLIDFR Sbjct: 1 MKFLDQAKVYIKSGDGGAGSVSFRREKFIEFGGPDGGDGGRGGDVWVEAVNGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +QQHFKA G GM RNR+GAKG DV L VPVGTQ+FEED +LICDL +EGQR +A G Sbjct: 61 FQQHFKATIGTHGMGRNRAGAKGADVTLKVPVGTQIFEEDEETLICDLTREGQRYRVAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNA+FKSS NQAP +ANPG+ G+EK IWL+LKLIAD G++GLPNAGKSTFLA+VT Sbjct: 121 GNGGFGNAYFKSSVNQAPDWANPGLPGEEKTIWLRLKLIADAGLVGLPNAGKSTFLAAVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIA+YPFTTL+PNLG+ +EF+LADIPG+I+ AH+G GIGDRFL H ERT VL Sbjct: 181 RARPKIANYPFTTLHPNLGVATIDGQEFVLADIPGLIEGAHEGVGIGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE V AY+ + EL AY +EL K EIV LSQID VD +TL +KK ELA C Sbjct: 241 LHLVSAQEEKVGKAYKTVKHELEAYGNELTDKPEIVALSQIDVVDEETLKKKKRELARAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 G+ PF S+ITG G+ ++L L D I G Sbjct: 301 GKTPFLISAITGSGMTEVLRALRDIIVEANG 331 >gi|319780946|ref|YP_004140422.1| GTP-binding protein Obg/CgtA [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166834|gb|ADV10372.1| GTP-binding protein Obg/CgtA [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 343 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 213/332 (64%), Positives = 252/332 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVYIRSGDGGAG +SFRREKFIEFGGPDGG GGRGGDVW++A LNTLID+R Sbjct: 1 MKFLDQAKVYIRSGDGGAGSVSFRREKFIEFGGPDGGDGGRGGDVWLEAVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RN +GAKG DV L VP GTQVFEED +LICDL GQR +LA G Sbjct: 61 YQQHFKAKTGVHGMGRNMTGAKGADVTLKVPAGTQVFEEDNETLICDLTVVGQRFLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFK+STNQAP ANPG+ GQE IWL+LKLIAD G++GLPNAGKSTFLA+VT Sbjct: 121 GNGGFGNQHFKTSTNQAPRRANPGLPGQELNIWLRLKLIADAGLVGLPNAGKSTFLAAVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+ + +EF++ADIPG+I+ AH+G GIGDRFL H ERT VL Sbjct: 181 AAKPKIADYPFTTLHPGLGVARIDAREFVIADIPGLIEGAHEGVGIGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EEN AY+ + EL AY L K+EI+ LSQ+DT+D+D +K L Sbjct: 241 LHLVSAQEENPGKAYKTVRAELDAYGHGLTDKVEILALSQVDTLDADARKKKVASLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G+ P S++TG G+ + L I R + Sbjct: 301 GRAPMLLSAVTGEGVEAVQRALMAVIAEARAQ 332 >gi|260466725|ref|ZP_05812911.1| GTP-binding protein Obg/CgtA [Mesorhizobium opportunistum WSM2075] gi|259029455|gb|EEW30745.1| GTP-binding protein Obg/CgtA [Mesorhizobium opportunistum WSM2075] Length = 343 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 210/332 (63%), Positives = 252/332 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVY+RSGDGGAG +SFRREKFIEFGGPDGG GGRGGDVW++A LNTLID+R Sbjct: 1 MKFLDQAKVYVRSGDGGAGSVSFRREKFIEFGGPDGGDGGRGGDVWLEAVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RN +GAKG DV L VP GTQVFEED +LICDL GQR +LA G Sbjct: 61 YQQHFKAKTGVHGMGRNMTGAKGADVTLKVPAGTQVFEEDNETLICDLTVVGQRFLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFK+STNQAP ANPG+ G+E IWL+LKLIAD G++GLPNAGKSTFLA+VT Sbjct: 121 GNGGFGNQHFKTSTNQAPRRANPGLPGEELNIWLRLKLIADAGLVGLPNAGKSTFLAAVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+ + +EF++ADIPG+I+ AH+G GIGDRFL H ERT VL Sbjct: 181 AAKPKIADYPFTTLHPGLGVARIDAREFVIADIPGLIEGAHEGVGIGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EEN AY+ + EL AY L +K EI+ LSQ+DT+++D +K L Sbjct: 241 LHLVSAQEENPGKAYKTVRAELDAYGHGLIEKAEILALSQVDTLNADERKKKVASLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G+ P S++TG G+ + L I R + Sbjct: 301 GRAPMLLSAVTGEGVEAVQRALMTVIAEARAQ 332 >gi|304392594|ref|ZP_07374534.1| Obg family GTPase CgtA [Ahrensia sp. R2A130] gi|303295224|gb|EFL89584.1| Obg family GTPase CgtA [Ahrensia sp. R2A130] Length = 386 Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust. Identities = 201/331 (60%), Positives = 251/331 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG GGAG +SF REK +EFGGPDGG+GG GGDVW +A +NLNTLID+R Sbjct: 28 MKFLDQAKIYIRSGAGGAGSVSFHREKHVEFGGPDGGNGGHGGDVWAEAVTNLNTLIDYR 87 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF+A+ G GM RNR GA+G DV L VPVGTQ++EED +LICDL EG+R +LA G Sbjct: 88 YQQHFRAKVGVHGMGRNRHGARGGDVTLKVPVGTQIYEEDNETLICDLTVEGERFLLAKG 147 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFK+STNQAP ANPG E+ +WL+LKLIAD GI+GLPNAGKSTFLA+V+ Sbjct: 148 GNGGFGNAHFKTSTNQAPRNANPGQEADERTLWLRLKLIADAGIVGLPNAGKSTFLATVS 207 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+ + + ++ADIPG+I+ A +G GIGDRFL H ERT VL Sbjct: 208 AAKPKIADYPFTTLHPNLGVARIDARTLVIADIPGLIEGASEGVGIGDRFLGHVERTRVL 267 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA E++V AY+ + EL AY +L K +++ LSQ D+VD++TLA K L + Sbjct: 268 LHLVSAQEDDVALAYRTVRTELEAYAEDLATKPQVLALSQTDSVDAETLAEKSAALKAEA 327 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 Q P SS T G+ ++L + + I R Sbjct: 328 KQKPLHLSSATHSGLDEVLRAMMEHIEEARA 358 >gi|110635786|ref|YP_675994.1| GTPase ObgE [Mesorhizobium sp. BNC1] gi|123057423|sp|Q11CP6|OBG_MESSB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|110286770|gb|ABG64829.1| small GTP-binding protein [Chelativorans sp. BNC1] Length = 349 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 214/322 (66%), Positives = 250/322 (77%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVYIR+GDGGAG +SFRREKFIEFGGPDGG GGRGGDVWI+A LNTLID+R Sbjct: 1 MKFLDQAKVYIRAGDGGAGAVSFRREKFIEFGGPDGGDGGRGGDVWIEAVEGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RNR+GAKG+DVVL VPVGTQV+EED +LICDL + GQR +L G Sbjct: 61 YQQHFKAKPGIHGMGRNRTGAKGDDVVLKVPVGTQVYEEDNETLICDLTEVGQRFLLLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKSSTNQAP ANPG+ G+E IWL+LKLIAD G+IGLPNAGKSTFLA+VT Sbjct: 121 GNGGFGNQHFKSSTNQAPRRANPGLPGEELWIWLRLKLIADAGLIGLPNAGKSTFLATVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+V+ +EF+LADIPG+I+ AH G GIGDRFL H ERT VL Sbjct: 181 AAKPKIADYPFTTLHPNLGVVRIDAREFVLADIPGLIEGAHMGVGIGDRFLGHVERTGVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++SA EE+V A Y+ + EL AY L +K E+V LSQID +D + K L Sbjct: 241 LHLISAREEDVAATYKTVRRELKAYGHGLSEKPEVVALSQIDLLDEEERREKLAALKKAA 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 + SS TG G+ +L L Sbjct: 301 RRAALPLSSATGEGVQDVLRAL 322 >gi|218660363|ref|ZP_03516293.1| GTPase ObgE [Rhizobium etli IE4771] Length = 289 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 209/289 (72%), Positives = 237/289 (82%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGGAG +SFRREKFIEFGGPDGG GGRGGDVW++ + LNTLIDFR Sbjct: 1 MKFLDEAKVYIRSGDGGAGSVSFRREKFIEFGGPDGGDGGRGGDVWVETVNGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA G GM RNR+GA G DV L VPVGTQ+FEED +LICDL EGQR LA G Sbjct: 61 YQQHFKATIGTHGMGRNRTGANGSDVTLKVPVGTQIFEEDRETLICDLTVEGQRYCLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFK+STNQAP +ANPG+ G+EK IWL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNAHFKTSTNQAPDWANPGLPGEEKTIWLRLKLIADAGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIA+YPFTTL+PNLG+ +EFILADIPG+I+ AH+G GIGDRFL H ERT VL Sbjct: 181 RARPKIANYPFTTLHPNLGVATIDEREFILADIPGLIEGAHEGVGIGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 LH+VSA EE V AY+ + EL AY ++L K EIV LSQID +D L Sbjct: 241 LHLVSAQEEKVGKAYKTVKHELEAYGNDLTDKPEIVALSQIDVLDEAEL 289 >gi|254719832|ref|ZP_05181643.1| GTPase ObgE [Brucella sp. 83/13] gi|265984850|ref|ZP_06097585.1| GTPase ObgE [Brucella sp. 83/13] gi|306839530|ref|ZP_07472338.1| GTP-binding protein Obg/CgtA [Brucella sp. NF 2653] gi|264663442|gb|EEZ33703.1| GTPase ObgE [Brucella sp. 83/13] gi|306405475|gb|EFM61746.1| GTP-binding protein Obg/CgtA [Brucella sp. NF 2653] Length = 341 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 211/332 (63%), Positives = 251/332 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG+GGAG +SFRREKF+EFGGPDGG GGRGGDVW++A LNTLID+R Sbjct: 1 MKFLDQAKIYIRSGNGGAGAVSFRREKFLEFGGPDGGDGGRGGDVWVEAVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RN +G KG+DVVL VPVGTQ+FEED +LICD+ + GQR LA G Sbjct: 61 YQQHFKAKTGMHGMGRNMTGGKGDDVVLRVPVGTQIFEEDNETLICDITEVGQRYRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG G E+ IWL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNLHFTTSTNRAPRRANPGQEGIERTIWLRLKLIADAGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+ + +EF++ADIPG+I+ A +G G+GDRFL H ERT VL Sbjct: 181 AAKPKIADYPFTTLHPNLGVARIDGREFVIADIPGLIEGASEGVGLGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AYQ I EL AY L K EIV LSQIDT+D +T K L C Sbjct: 241 LHLVSAQEEDVAKAYQVIRGELEAYEHGLADKPEIVALSQIDTLDPETRKAKVTALKKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G+ P S+++ G+ L L I R E Sbjct: 301 GREPLLLSAVSHEGLNDTLRQLARIIDLSRAE 332 >gi|306844827|ref|ZP_07477412.1| GTP-binding protein Obg/CgtA [Brucella sp. BO1] gi|306274999|gb|EFM56769.1| GTP-binding protein Obg/CgtA [Brucella sp. BO1] Length = 341 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 210/332 (63%), Positives = 251/332 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG+GGAG +SFRREKF+EFGGPDGG GGRGGDVW++A LNTLID+R Sbjct: 1 MKFLDQAKIYIRSGNGGAGAVSFRREKFLEFGGPDGGDGGRGGDVWVEAVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RN +G KG+DVVL VPVGTQ+FEED +LICD+ + GQR LA G Sbjct: 61 YQQHFKAKTGMHGMGRNMTGGKGDDVVLRVPVGTQIFEEDNETLICDITEVGQRYRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG G E+ IWL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNLHFTTSTNRAPRRANPGQEGVERTIWLRLKLIADAGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+ + +EF++ADIPG+I+ A +G G+GDRFL H ERT VL Sbjct: 181 AAKPKIADYPFTTLHPNLGVARIDGREFVIADIPGLIEGASEGVGLGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AYQ I EL AY L K EIV LSQ+DT+D +T K L C Sbjct: 241 LHLVSAQEEDVAKAYQVIRGELEAYEHGLADKPEIVALSQVDTLDPETRKAKVKALKKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G+ P S+++ G+ L L I R E Sbjct: 301 GREPLLLSAVSHEGLNDTLRQLARIIDLSRAE 332 >gi|240849824|ref|YP_002971212.1| GTP-binding protein [Bartonella grahamii as4aup] gi|240266947|gb|ACS50535.1| GTP-binding protein [Bartonella grahamii as4aup] Length = 341 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 201/321 (62%), Positives = 247/321 (76%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVYIRSG+GG+G +SFRREKFIEFGGPDGG+GGRGGDVW LNTLID+R Sbjct: 1 MKFLDQAKVYIRSGNGGSGAVSFRREKFIEFGGPDGGNGGRGGDVWALVVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G G RN +G KG+DV+L VPVGTQ+FEED +LICDL + GQR LA G Sbjct: 61 YQQHFKAKTGGHGKGRNMTGEKGDDVILKVPVGTQIFEEDNTTLICDLTEVGQRYRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG+ G+E+ +WL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNLHFTTSTNRAPRRANPGLAGEERAVWLRLKLIADAGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPK+ADYPFTTL+P+LG+V+ +EF+LADIPG+I+ AH+G GIGDRFL H ER VL Sbjct: 181 AAKPKVADYPFTTLHPHLGVVRIDGREFVLADIPGLIEGAHEGVGIGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++S+ EE+V AYQ + EL AY + L K EIV LSQIDT+ + K+ L Sbjct: 241 LHLISSQEEDVAKAYQIVRHELEAYGNNLSDKTEIVALSQIDTLTIEERKTKQEALQRAA 300 Query: 301 GQVPFEFSSITGHGIPQILEC 321 GQ FS+++ G+ +L Sbjct: 301 GQPVMMFSAVSREGLENVLRA 321 >gi|150398204|ref|YP_001328671.1| GTPase ObgE [Sinorhizobium medicae WSM419] gi|261263092|sp|A6UDV6|OBG_SINMW RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|150029719|gb|ABR61836.1| GTP-binding protein Obg/CgtA [Sinorhizobium medicae WSM419] Length = 336 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 218/334 (65%), Positives = 255/334 (76%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDE KVYIRSGDGGAG +SFRREKFIEFGGPDGG GGRGGDVW++A + LNTLIDFR Sbjct: 1 MKFLDETKVYIRSGDGGAGAVSFRREKFIEFGGPDGGDGGRGGDVWVEAVNGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RNR+GAKG DV L VPVGTQ+FEED +LI D+ EGQR LA G Sbjct: 61 YQQHFKAKTGTHGMGRNRTGAKGADVTLKVPVGTQIFEEDSETLIVDMVAEGQRYRLAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTNQAP +ANPG+ G+EK IWL+LKLIAD G++GLPNAGKSTFLA+ T Sbjct: 121 GNGGFGNAHFKSSTNQAPNWANPGLEGEEKTIWLRLKLIADAGLVGLPNAGKSTFLAACT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIA+YPFTTL+PNLG+ KEFI+ADIPG+I+ AH+G GIGDRFL H ERT VL Sbjct: 181 RARPKIANYPFTTLHPNLGVATVDEKEFIIADIPGLIEGAHEGVGIGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AY+ + EL AY L +K +IV LSQID +D L K L C Sbjct: 241 LHLVSAQEEDVAKAYKTVKHELEAYGGGLEEKPQIVALSQIDVLDEAELKAKSKALGKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 G P S++T G+ + L L I + + E Sbjct: 301 GTPPLLISAVTNKGMTETLRALRSVIDAAKAGEE 334 >gi|306841624|ref|ZP_07474319.1| GTP-binding protein Obg/CgtA [Brucella sp. BO2] gi|306288315|gb|EFM59683.1| GTP-binding protein Obg/CgtA [Brucella sp. BO2] Length = 341 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 210/332 (63%), Positives = 251/332 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG+GGAG +SFRREKF+EFGGPDGG GGRGGDVW++A LNTLID+R Sbjct: 1 MKFLDQAKIYIRSGNGGAGAVSFRREKFLEFGGPDGGDGGRGGDVWVEAVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RN +G KG+DVVL VPVGTQ+FEED +LICD+ + GQR LA G Sbjct: 61 YQQHFKAKTGMHGMGRNMTGGKGDDVVLRVPVGTQIFEEDNETLICDITEVGQRYRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG G E+ IWL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNLHFTTSTNRAPRRANPGQEGIERTIWLRLKLIADAGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+ + +EF++ADIPG+I+ A +G G+GDRFL H ERT VL Sbjct: 181 AAKPKIADYPFTTLHPNLGVARIDGREFVIADIPGLIEGASEGVGLGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AYQ I EL AY L K EIV LSQ+DT+D +T K L C Sbjct: 241 LHLVSAQEEDVAKAYQVIRGELEAYEHGLADKPEIVALSQVDTLDPETRKAKVKALKKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G+ P S+++ G+ L L I R E Sbjct: 301 GREPLLLSAVSHEGLNDTLRQLARIIDLSRAE 332 >gi|222150157|ref|YP_002551114.1| GTPase ObgE [Agrobacterium vitis S4] gi|261266644|sp|B9JUH9|OBG_AGRVS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|221737139|gb|ACM38102.1| GTP-binding protein [Agrobacterium vitis S4] Length = 366 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 221/334 (66%), Positives = 259/334 (77%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGGAG +SFRREKFIEFGGPDGG GGRGGDVW++A + LNTLIDFR Sbjct: 1 MKFLDEAKVYIRSGDGGAGAVSFRREKFIEFGGPDGGDGGRGGDVWVEAVNGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +QQHFKA G GM RNR+GA GE V L VPVGTQ+FEED +LI D+ EGQR LA G Sbjct: 61 FQQHFKATVGTHGMGRNRTGANGEHVTLKVPVGTQIFEEDAETLIVDMVTEGQRFRLAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKS+TNQAP +ANPG+ G+EK IWL+LKLIAD G++GLPNAGKSTFLA+VT Sbjct: 121 GNGGFGNAHFKSATNQAPDWANPGLEGEEKTIWLRLKLIADAGLVGLPNAGKSTFLAAVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIA+YPFTTL+PNLG+ +EFILADIPG+I+ AH+G GIGDRFL H ERT VL Sbjct: 181 RARPKIANYPFTTLHPNLGVATVDEREFILADIPGLIEGAHEGVGIGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AY + EL AY+ L K EIV LSQID +D D L +K L C Sbjct: 241 LHLVSAQEEDVAKAYTTVAHELEAYDGGLEDKPEIVALSQIDVLDEDELKKKLKALQKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + P S+ITG G+ ++L L D I R ++ Sbjct: 301 SKKPMMISAITGKGMLEVLRALRDVIVENRSYDD 334 >gi|254694489|ref|ZP_05156317.1| GTPase ObgE [Brucella abortus bv. 3 str. Tulya] gi|261214805|ref|ZP_05929086.1| GTPase ObgE [Brucella abortus bv. 3 str. Tulya] gi|260916412|gb|EEX83273.1| GTPase ObgE [Brucella abortus bv. 3 str. Tulya] Length = 341 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 211/332 (63%), Positives = 251/332 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG+GGAG +SFRREKF+EFGGPDGG GGRGGDVW++A LNTLID+R Sbjct: 1 MKFLDQAKIYIRSGNGGAGAVSFRREKFLEFGGPDGGDGGRGGDVWVEAVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RN +G KG+DVVL VPVGTQ+FEED +LICD+ + GQR LA G Sbjct: 61 YQQHFKAKTGMHGMGRNMTGGKGDDVVLRVPVGTQIFEEDNETLICDITEVGQRYRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG G E+ IWL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNLHFTTSTNRAPRRANPGQEGIERTIWLRLKLIADAGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+ + +EF++ADIPG+I+ A +GAG+GDRFL H ERT VL Sbjct: 181 AAKPKIADYPFTTLHPNLGVARIDGREFVIADIPGLIEGASEGAGLGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AYQ I EL AY L K EIV LSQ+DT+D +T K L C Sbjct: 241 LHLVSAQEEDVAKAYQVIRGELEAYEHGLADKPEIVALSQVDTLDPETRKAKVKALKKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G P S+++ G+ L L I R E Sbjct: 301 GCEPLLLSAVSHEGLNDTLRQLARIIDLSRAE 332 >gi|158425765|ref|YP_001527057.1| small GTP-binding protein domain-containing protein [Azorhizobium caulinodans ORS 571] gi|261266663|sp|A8HS51|OBG_AZOC5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|158332654|dbj|BAF90139.1| small GTP-binding protein domain [Azorhizobium caulinodans ORS 571] Length = 345 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 203/322 (63%), Positives = 247/322 (76%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVY+RSGDGGAG +SFRREKFIEFGGPDGG+GGRGGDVWI+ LNTLID+R Sbjct: 1 MKFLDQAKVYVRSGDGGAGCVSFRREKFIEFGGPDGGNGGRGGDVWIECVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ GE GM NR+GAKG DVVL VP GTQV +ED +++ DL + GQRI L G Sbjct: 61 YQQHFKAKKGEHGMGANRAGAKGSDVVLRVPAGTQVLDEDEETILADLTEVGQRIRLLSG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNA FK+STNQAP ANPG+ GQEK IWL+LKLIAD G++GLPNAGKSTFLA+ T Sbjct: 121 GNGGFGNAEFKTSTNQAPRRANPGLEGQEKWIWLRLKLIADAGLVGLPNAGKSTFLAATT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V+ +EF+LADIPG+I+ AH+GAG+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPGLGVVRVDGREFVLADIPGLIEGAHEGAGLGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E+ AY+ + EL AY L ++EIV LS+ID++ + L ++K L Sbjct: 241 LHLVDGTCEHAGKAYKTVRQELVAYGGGLEDRVEIVALSKIDSLTPELLKQQKERLQRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 + P SS +G G+P+ L L Sbjct: 301 KKKPLLLSSQSGKGVPEALRAL 322 >gi|237816209|ref|ZP_04595204.1| GTP-binding protein Obg/CgtA [Brucella abortus str. 2308 A] gi|237788671|gb|EEP62884.1| GTP-binding protein Obg/CgtA [Brucella abortus str. 2308 A] Length = 375 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 210/332 (63%), Positives = 250/332 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG+GGAG +SFRREKF+EFGGPDGG GGRGGDVW++A LNTLID+R Sbjct: 35 MKFLDQAKIYIRSGNGGAGAVSFRREKFLEFGGPDGGDGGRGGDVWVEAVDGLNTLIDYR 94 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RN +G KG+DVVL VPVGTQ+FEED +LICD+ + GQR LA G Sbjct: 95 YQQHFKAKTGMHGMGRNMTGGKGDDVVLRVPVGTQIFEEDNETLICDITEVGQRYRLAKG 154 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG G E+ IWL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 155 GNGGFGNLHFTTSTNRAPRRANPGQEGIERTIWLRLKLIADAGLVGLPNAGKSTFLASVT 214 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+ + +EF++ADIPG+I+ A +G G+GDRFL H ERT VL Sbjct: 215 AAKPKIADYPFTTLHPNLGVARIDGREFVIADIPGLIEGASEGVGLGDRFLGHVERTRVL 274 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AYQ I EL AY L K EIV LSQ+DT+D +T K L C Sbjct: 275 LHLVSAQEEDVAKAYQVIRGELEAYEHGLADKPEIVALSQVDTLDPETRKAKVKALKKAC 334 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G P S+++ G+ L L I R E Sbjct: 335 GCEPLLLSAVSHEGLNDTLRQLARIIDLSRAE 366 >gi|225628396|ref|ZP_03786430.1| GTP-binding protein Obg/CgtA [Brucella ceti str. Cudo] gi|225616242|gb|EEH13290.1| GTP-binding protein Obg/CgtA [Brucella ceti str. Cudo] Length = 375 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 209/332 (62%), Positives = 249/332 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG+GGAG +SFRREKF+EFGGPDGG GG GGDVW++A LNTLID+R Sbjct: 35 MKFLDQAKIYIRSGNGGAGAVSFRREKFLEFGGPDGGDGGCGGDVWVEAVDGLNTLIDYR 94 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RN +G KG+DVVL VPVGTQ+FEED +LICD+ + GQR LA G Sbjct: 95 YQQHFKAKTGMHGMGRNMTGGKGDDVVLRVPVGTQIFEEDNETLICDITEVGQRYRLAKG 154 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG G E+ IWL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 155 GNGGFGNLHFTTSTNRAPRRANPGQEGIERTIWLRLKLIADAGLVGLPNAGKSTFLASVT 214 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+ + +EF++ADIPG+I+ A +G G+GDRFL H ERT VL Sbjct: 215 AAKPKIADYPFTTLHPNLGVARIDGREFVIADIPGLIEGASEGVGLGDRFLGHVERTRVL 274 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AYQ I EL AY L K EIV LSQ+DT+D +T K L C Sbjct: 275 LHLVSAQEEDVAKAYQVIRGELEAYEHGLADKPEIVALSQVDTLDPETRKAKVKALKKAC 334 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G P S+++ G+ L L I R E Sbjct: 335 GCEPLLLSAVSHEGLNDTLRQLARIIDLSRAE 366 >gi|297249100|ref|ZP_06932808.1| obg family GTPase CgtA [Brucella abortus bv. 5 str. B3196] gi|17982091|gb|AAL51388.1| gtp-binding protein [Brucella melitensis bv. 1 str. 16M] gi|297174233|gb|EFH33590.1| obg family GTPase CgtA [Brucella abortus bv. 5 str. B3196] Length = 368 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 210/332 (63%), Positives = 250/332 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG+GGAG +SFRREKF+EFGGPDGG GGRGGDVW++A LNTLID+R Sbjct: 28 MKFLDQAKIYIRSGNGGAGAVSFRREKFLEFGGPDGGDGGRGGDVWVEAVDGLNTLIDYR 87 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RN +G KG+DVVL VPVGTQ+FEED +LICD+ + GQR LA G Sbjct: 88 YQQHFKAKTGMHGMGRNMTGGKGDDVVLRVPVGTQIFEEDNETLICDITEVGQRYRLAKG 147 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG G E+ IWL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 148 GNGGFGNLHFTTSTNRAPRRANPGQEGIERTIWLRLKLIADAGLVGLPNAGKSTFLASVT 207 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+ + +EF++ADIPG+I+ A +G G+GDRFL H ERT VL Sbjct: 208 AAKPKIADYPFTTLHPNLGVARIDGREFVIADIPGLIEGASEGVGLGDRFLGHVERTRVL 267 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AYQ I EL AY L K EIV LSQ+DT+D +T K L C Sbjct: 268 LHLVSAQEEDVAKAYQVIRGELEAYEHGLADKPEIVALSQVDTLDPETRKAKVKALKKAC 327 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G P S+++ G+ L L I R E Sbjct: 328 GCEPLLLSAVSHEGLNDTLRQLARIIDLSRAE 359 >gi|260168043|ref|ZP_05754854.1| GTPase ObgE [Brucella sp. F5/99] gi|261757491|ref|ZP_06001200.1| GTP-binding protein [Brucella sp. F5/99] gi|261737475|gb|EEY25471.1| GTP-binding protein [Brucella sp. F5/99] Length = 341 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 209/332 (62%), Positives = 249/332 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG+GGAG +SFRREKF+EFGGPDGG GG GGDVW++A LNTLID+R Sbjct: 1 MKFLDQAKIYIRSGNGGAGAVSFRREKFLEFGGPDGGDGGCGGDVWVEAVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RN +G KG+DVVL VPVGTQ+FEED +LICD+ + GQR LA G Sbjct: 61 YQQHFKAKTGMHGMGRNMTGGKGDDVVLRVPVGTQIFEEDNETLICDITEVGQRYRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG G E+ IWL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNLHFTTSTNRAPRRANPGQEGIERTIWLRLKLIADAGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+ + +EF++ADIPG+I+ A +G G+GDRFL H ERT VL Sbjct: 181 AAKPKIADYPFTTLHPNLGVARIDGREFVIADIPGLIEGASEGVGLGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AYQ I EL AY L K EIV LSQ+DT+D +T K L C Sbjct: 241 LHLVSAQEEDVAKAYQVIRGELEAYEHGLADKPEIVALSQVDTLDPETRKAKVKALKKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G P S+++ G+ L L I R E Sbjct: 301 GCEPLLLSAVSHEGLNDTLRQLARIIDLSRAE 332 >gi|23502698|ref|NP_698825.1| GTPase ObgE [Brucella suis 1330] gi|62290707|ref|YP_222500.1| GTPase ObgE [Brucella abortus bv. 1 str. 9-941] gi|82700623|ref|YP_415197.1| GTPase ObgE [Brucella melitensis biovar Abortus 2308] gi|161511162|ref|NP_539124.2| GTPase ObgE [Brucella melitensis bv. 1 str. 16M] gi|161619764|ref|YP_001593651.1| GTPase ObgE [Brucella canis ATCC 23365] gi|163845422|ref|YP_001623077.1| GTPase ObgE [Brucella suis ATCC 23445] gi|189024921|ref|YP_001935689.1| GTPase ObgE [Brucella abortus S19] gi|225853287|ref|YP_002733520.1| GTPase ObgE [Brucella melitensis ATCC 23457] gi|254689998|ref|ZP_05153252.1| GTPase ObgE [Brucella abortus bv. 6 str. 870] gi|254698149|ref|ZP_05159977.1| GTPase ObgE [Brucella abortus bv. 2 str. 86/8/59] gi|254700487|ref|ZP_05162315.1| GTPase ObgE [Brucella suis bv. 5 str. 513] gi|254703610|ref|ZP_05165438.1| GTPase ObgE [Brucella suis bv. 3 str. 686] gi|254731032|ref|ZP_05189610.1| GTPase ObgE [Brucella abortus bv. 4 str. 292] gi|256061867|ref|ZP_05452001.1| GTPase ObgE [Brucella neotomae 5K33] gi|256114423|ref|ZP_05455143.1| GTPase ObgE [Brucella melitensis bv. 3 str. Ether] gi|256160540|ref|ZP_05458229.1| GTPase ObgE [Brucella ceti M490/95/1] gi|256255746|ref|ZP_05461282.1| GTPase ObgE [Brucella ceti B1/94] gi|256258253|ref|ZP_05463789.1| GTPase ObgE [Brucella abortus bv. 9 str. C68] gi|256263224|ref|ZP_05465756.1| GTP-binding protein [Brucella melitensis bv. 2 str. 63/9] gi|256370249|ref|YP_003107760.1| GTP-binding protein, GTP1/OBG family [Brucella microti CCM 4915] gi|260547053|ref|ZP_05822791.1| GTP-binding protein [Brucella abortus NCTC 8038] gi|260565666|ref|ZP_05836149.1| GTP-binding protein [Brucella melitensis bv. 1 str. 16M] gi|260568916|ref|ZP_05839384.1| GTP-binding protein [Brucella suis bv. 4 str. 40] gi|260755534|ref|ZP_05867882.1| GTPase ObgE [Brucella abortus bv. 6 str. 870] gi|260758757|ref|ZP_05871105.1| GTPase ObgE [Brucella abortus bv. 4 str. 292] gi|260762591|ref|ZP_05874928.1| GTPase ObgE [Brucella abortus bv. 2 str. 86/8/59] gi|260884556|ref|ZP_05896170.1| GTPase ObgE [Brucella abortus bv. 9 str. C68] gi|261222961|ref|ZP_05937242.1| GTPase ObgE [Brucella ceti B1/94] gi|261325873|ref|ZP_05965070.1| GTPase ObgE [Brucella neotomae 5K33] gi|261750991|ref|ZP_05994700.1| GTPase ObgE [Brucella suis bv. 5 str. 513] gi|261754244|ref|ZP_05997953.1| GTPase ObgE [Brucella suis bv. 3 str. 686] gi|265995712|ref|ZP_06108269.1| GTPase ObgE [Brucella melitensis bv. 3 str. Ether] gi|265998920|ref|ZP_06111477.1| GTPase ObgE [Brucella ceti M490/95/1] gi|75496246|sp|Q57B45|OBG_BRUAB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|81752035|sp|Q8FYM2|OBG_BRUSU RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|123546186|sp|Q2YLM2|OBG_BRUA2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266690|sp|B2S806|OBG_BRUA1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266691|sp|A9M882|OBG_BRUC2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266692|sp|A9WWW9|OBG_BRUSI RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266755|sp|Q8YJ80|OBG_BRUME RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266756|sp|A5VSI5|OBG_BRUO2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|23348710|gb|AAN30740.1| GTP-binding protein, GTP1/OBG family [Brucella suis 1330] gi|62196839|gb|AAX75139.1| GTP-binding protein, GTP1/OBG family [Brucella abortus bv. 1 str. 9-941] gi|82616724|emb|CAJ11809.1| Hemolysin-type calcium-binding region:ATP/GTP-binding site motif A (P-loop):GTP1/OBG:GTP1/OBG domain:GTP1/OBG sub-domain [Brucella melitensis biovar Abortus 2308] gi|161336575|gb|ABX62880.1| GTP-binding protein Obg/CgtA [Brucella canis ATCC 23365] gi|163676145|gb|ABY40255.1| GTP-binding protein Obg/CgtA [Brucella suis ATCC 23445] gi|189020493|gb|ACD73215.1| GTP-binding protein, GTP1/OBG family [Brucella abortus S19] gi|225641652|gb|ACO01566.1| GTP-binding protein Obg/CgtA [Brucella melitensis ATCC 23457] gi|256000412|gb|ACU48811.1| GTP-binding protein, GTP1/OBG family [Brucella microti CCM 4915] gi|260095418|gb|EEW79296.1| GTP-binding protein [Brucella abortus NCTC 8038] gi|260151039|gb|EEW86134.1| GTP-binding protein [Brucella melitensis bv. 1 str. 16M] gi|260154300|gb|EEW89382.1| GTP-binding protein [Brucella suis bv. 4 str. 40] gi|260669075|gb|EEX56015.1| GTPase ObgE [Brucella abortus bv. 4 str. 292] gi|260673017|gb|EEX59838.1| GTPase ObgE [Brucella abortus bv. 2 str. 86/8/59] gi|260675642|gb|EEX62463.1| GTPase ObgE [Brucella abortus bv. 6 str. 870] gi|260874084|gb|EEX81153.1| GTPase ObgE [Brucella abortus bv. 9 str. C68] gi|260921545|gb|EEX88198.1| GTPase ObgE [Brucella ceti B1/94] gi|261301853|gb|EEY05350.1| GTPase ObgE [Brucella neotomae 5K33] gi|261740744|gb|EEY28670.1| GTPase ObgE [Brucella suis bv. 5 str. 513] gi|261743997|gb|EEY31923.1| GTPase ObgE [Brucella suis bv. 3 str. 686] gi|262553609|gb|EEZ09378.1| GTPase ObgE [Brucella ceti M490/95/1] gi|262766996|gb|EEZ12614.1| GTPase ObgE [Brucella melitensis bv. 3 str. Ether] gi|263093185|gb|EEZ17282.1| GTP-binding protein [Brucella melitensis bv. 2 str. 63/9] gi|326409851|gb|ADZ66916.1| GTP-binding protein, GTP1/OBG family [Brucella melitensis M28] gi|326539564|gb|ADZ87779.1| GTP-binding protein Obg/CgtA [Brucella melitensis M5-90] Length = 341 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 210/332 (63%), Positives = 250/332 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG+GGAG +SFRREKF+EFGGPDGG GGRGGDVW++A LNTLID+R Sbjct: 1 MKFLDQAKIYIRSGNGGAGAVSFRREKFLEFGGPDGGDGGRGGDVWVEAVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RN +G KG+DVVL VPVGTQ+FEED +LICD+ + GQR LA G Sbjct: 61 YQQHFKAKTGMHGMGRNMTGGKGDDVVLRVPVGTQIFEEDNETLICDITEVGQRYRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG G E+ IWL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNLHFTTSTNRAPRRANPGQEGIERTIWLRLKLIADAGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+ + +EF++ADIPG+I+ A +G G+GDRFL H ERT VL Sbjct: 181 AAKPKIADYPFTTLHPNLGVARIDGREFVIADIPGLIEGASEGVGLGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AYQ I EL AY L K EIV LSQ+DT+D +T K L C Sbjct: 241 LHLVSAQEEDVAKAYQVIRGELEAYEHGLADKPEIVALSQVDTLDPETRKAKVKALKKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G P S+++ G+ L L I R E Sbjct: 301 GCEPLLLSAVSHEGLNDTLRQLARIIDLSRAE 332 >gi|148560362|ref|YP_001259682.1| GTPase ObgE [Brucella ovis ATCC 25840] gi|148371619|gb|ABQ61598.1| GTP-binding protein Obg/CgtA [Brucella ovis ATCC 25840] Length = 371 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 210/332 (63%), Positives = 250/332 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG+GGAG +SFRREKF+EFGGPDGG GGRGGDVW++A LNTLID+R Sbjct: 31 MKFLDQAKIYIRSGNGGAGAVSFRREKFLEFGGPDGGDGGRGGDVWVEAVDGLNTLIDYR 90 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RN +G KG+DVVL VPVGTQ+FEED +LICD+ + GQR LA G Sbjct: 91 YQQHFKAKTGMHGMGRNMTGGKGDDVVLRVPVGTQIFEEDNETLICDITEVGQRYRLAKG 150 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG G E+ IWL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 151 GNGGFGNLHFTTSTNRAPRRANPGQEGIERTIWLRLKLIADAGLVGLPNAGKSTFLASVT 210 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+ + +EF++ADIPG+I+ A +G G+GDRFL H ERT VL Sbjct: 211 AAKPKIADYPFTTLHPNLGVARIDGREFVIADIPGLIEGASEGVGLGDRFLGHVERTRVL 270 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AYQ I EL AY L K EIV LSQ+DT+D +T K L C Sbjct: 271 LHLVSAQEEDVAKAYQVIRGELEAYEHGLADKPEIVALSQVDTLDPETRKAKVKALKKAC 330 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G P S+++ G+ L L I R E Sbjct: 331 GCEPLLLSAVSHEGLNDTLRQLARIIDLSRAE 362 >gi|192288590|ref|YP_001989195.1| GTPase ObgE [Rhodopseudomonas palustris TIE-1] gi|261277737|sp|B3Q731|OBG_RHOPT RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|192282339|gb|ACE98719.1| GTP-binding protein Obg/CgtA [Rhodopseudomonas palustris TIE-1] Length = 353 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 198/322 (61%), Positives = 250/322 (77%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGG G ++FRREKFIEFGGP+GG+GGRGGD+ ++A LNTLID+R Sbjct: 1 MKFLDEAKVYIRSGDGGNGCVAFRREKFIEFGGPNGGNGGRGGDIIVEAADGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKAQ G GM +R GA G+D+V+ VPVGTQ+F+ED +LI D + G+R +LA G Sbjct: 61 YQQHFKAQKGGNGMGSDRHGAGGKDIVMKVPVGTQIFDEDKETLIHDFTKVGERFVLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTN+AP +ANPG+ G+E+ IWL+LKLIAD G++GLPNAGKSTFL+ V+ Sbjct: 121 GNGGFGNAHFKSSTNRAPRHANPGLPGEERWIWLRLKLIADAGLVGLPNAGKSTFLSKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V +EF+LADIPG+I+ AH+GAG+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPQLGVVNSDGREFVLADIPGLIEGAHEGAGLGDRFLGHIERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ A E+ AY+ + EL AY L KIEIV L++ID V+ D L ++K+ L Sbjct: 241 LHLIDATCEHAGKAYKTVRGELEAYAETLVDKIEIVALNKIDAVEPDELKKQKDRLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 + P S +TG G+P++L L Sbjct: 301 KKTPLLLSGVTGQGVPEVLRAL 322 >gi|220924592|ref|YP_002499894.1| GTP-binding protein Obg/CgtA [Methylobacterium nodulans ORS 2060] gi|261266853|sp|B8IEL9|OBG_METNO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|219949199|gb|ACL59591.1| GTP-binding protein Obg/CgtA [Methylobacterium nodulans ORS 2060] Length = 342 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 203/322 (63%), Positives = 244/322 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGGAG +SFRREKFIEFGGPDGG GGRGGDVW + LNTLID+R Sbjct: 1 MKFLDEAKVYIRSGDGGAGCVSFRREKFIEFGGPDGGDGGRGGDVWAECVEGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ GE G RNR+GAKG DVVL VP GT++ ED + I DL Q GQR++LA G Sbjct: 61 YQQHFKAKKGEHGSGRNRAGAKGADVVLKVPAGTEILAEDRETQIADLTQVGQRVLLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNA+F +STN+AP +ANPG G+E +WL+LKLIAD G++GLPNAGKSTFLA+VT Sbjct: 121 GNGGFGNAYFTTSTNRAPRHANPGQEGREHWLWLRLKLIADAGLVGLPNAGKSTFLATVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V+ +EF+LADIPG+I+ AH+G G+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPGLGVVRVDAREFVLADIPGLIEGAHEGVGLGDRFLAHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E+ AAYQ + EL AY L +K EIV LS+ D +D +TLA + L Sbjct: 241 LHLVDGTSEDAGAAYQLVRTELDAYGHGLAEKPEIVALSKADILDPETLAAQVARLEEAA 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 G+ P S+ T G+P+ L L Sbjct: 301 GRPPLVLSAATRQGVPEALRAL 322 >gi|254714684|ref|ZP_05176495.1| GTPase ObgE [Brucella ceti M644/93/1] gi|254717582|ref|ZP_05179393.1| GTPase ObgE [Brucella ceti M13/05/1] gi|261219416|ref|ZP_05933697.1| GTPase ObgE [Brucella ceti M13/05/1] gi|261322478|ref|ZP_05961675.1| GTPase ObgE [Brucella ceti M644/93/1] gi|260924505|gb|EEX91073.1| GTPase ObgE [Brucella ceti M13/05/1] gi|261295168|gb|EEX98664.1| GTPase ObgE [Brucella ceti M644/93/1] Length = 341 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 209/332 (62%), Positives = 249/332 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG+GGAG +SFRREKF+EFGGPDGG GGRGGDVW++ LNTLID+R Sbjct: 1 MKFLDQAKIYIRSGNGGAGAVSFRREKFLEFGGPDGGDGGRGGDVWVETVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RN +G KG+DVVL VPVGTQ+FEED +LICD+ + GQR LA G Sbjct: 61 YQQHFKAKTGMHGMGRNMTGGKGDDVVLRVPVGTQIFEEDNETLICDITEVGQRYRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG G E+ IWL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNLHFTTSTNRAPRRANPGQEGIERTIWLRLKLIADAGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+ + +EF++ADIPG+I+ A +G G+GDRFL H ERT VL Sbjct: 181 AAKPKIADYPFTTLHPNLGVARIDGREFVIADIPGLIEGASEGVGLGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AYQ I EL AY L K EIV LSQ+DT+D +T K L C Sbjct: 241 LHLVSAQEEDVAKAYQVIRGELEAYEHGLADKPEIVALSQVDTLDPETRKAKVKALKKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G P S+++ G+ L L I R E Sbjct: 301 GCEPLLLSAVSHEGLNDTLRQLARIIDLSRAE 332 >gi|121602229|ref|YP_988637.1| GTPase ObgE [Bartonella bacilliformis KC583] gi|261266749|sp|A1URN4|OBG_BARBK RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|120614406|gb|ABM45007.1| GTP-binding protein Obg/CgtA [Bartonella bacilliformis KC583] Length = 339 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 205/332 (61%), Positives = 248/332 (74%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVY+RSG GGAG +SFRREKFIEFGGPDGG+GGRGGDVW LNTLID+R Sbjct: 1 MKFLDQAKVYVRSGSGGAGAVSFRREKFIEFGGPDGGNGGRGGDVWALVVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF+A++G G RN +GAKG+DVVL VPVGTQ+FEED +LICDL + GQR LA G Sbjct: 61 YQQHFRAKNGGHGKGRNMTGAKGDDVVLRVPVGTQIFEEDNKTLICDLTEVGQRYCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG+ G+E+ +WL+LKLIAD GIIGLPNAGKSTFLASVT Sbjct: 121 GNGGFGNLHFVTSTNRAPRRANPGLSGEERALWLRLKLIADGGIIGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIA YPFTTLYP+LG+ + +EF+LADIPG+I+ AH+G GIGDRFL H ER VL Sbjct: 181 TAKPKIAAYPFTTLYPHLGVARIDAREFVLADIPGLIEGAHEGVGIGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++S EE+V AYQ I EL Y + L K EIV LSQ+DT+ + K+ L Sbjct: 241 LHLISIQEEDVVKAYQIIRRELETYGNNLSDKTEIVALSQVDTLPIEECKAKQEALQKSV 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 GQ FS+++ G+ +L + I R + Sbjct: 301 GQPVMMFSAVSHEGLDNVLRSVAHVIEMARAD 332 >gi|316931870|ref|YP_004106852.1| GTP-binding protein Obg/CgtA [Rhodopseudomonas palustris DX-1] gi|315599584|gb|ADU42119.1| GTP-binding protein Obg/CgtA [Rhodopseudomonas palustris DX-1] Length = 353 Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust. Identities = 199/322 (61%), Positives = 248/322 (77%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGG G ++FRREKFIEFGGP+GG+GGRGGD+ ++A LNTLID+R Sbjct: 1 MKFLDEAKVYIRSGDGGNGCVAFRREKFIEFGGPNGGNGGRGGDIIVEAADGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA G GM +R GA G+DVV+ VPVGTQ+F+ED +LI D + G+R +LA G Sbjct: 61 YQQHFKAPKGGNGMGSDRHGAGGKDVVMKVPVGTQIFDEDKETLIYDFTKVGERFVLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTN+AP +ANPG+ G+E+ IWL+LKLIAD G++GLPNAGKSTFL+ V+ Sbjct: 121 GNGGFGNAHFKSSTNRAPRHANPGLPGEERWIWLRLKLIADAGLVGLPNAGKSTFLSKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V +EF+LADIPG+I+ AH+GAG+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPQLGVVNSDGREFVLADIPGLIEGAHEGAGLGDRFLGHIERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ A E+ AY+ + EL AY L KIEIV L++ID VD D L ++K+ L Sbjct: 241 LHLIDATCEHAGKAYKTVRGELEAYADALTDKIEIVALNKIDAVDPDELKKQKDRLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 + P S +TG G+P+ L L Sbjct: 301 KKTPLLLSGVTGRGVPEALRAL 322 >gi|254708305|ref|ZP_05170133.1| GTPase ObgE [Brucella pinnipedialis M163/99/10] gi|254708844|ref|ZP_05170655.1| GTPase ObgE [Brucella pinnipedialis B2/94] gi|256030370|ref|ZP_05443984.1| GTPase ObgE [Brucella pinnipedialis M292/94/1] gi|261315803|ref|ZP_05955000.1| GTPase ObgE [Brucella pinnipedialis M163/99/10] gi|261316337|ref|ZP_05955534.1| GTPase ObgE [Brucella pinnipedialis B2/94] gi|265987407|ref|ZP_06099964.1| GTPase ObgE [Brucella pinnipedialis M292/94/1] gi|261295560|gb|EEX99056.1| GTPase ObgE [Brucella pinnipedialis B2/94] gi|261304829|gb|EEY08326.1| GTPase ObgE [Brucella pinnipedialis M163/99/10] gi|264659604|gb|EEZ29865.1| GTPase ObgE [Brucella pinnipedialis M292/94/1] Length = 341 Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust. Identities = 210/332 (63%), Positives = 249/332 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG+GGAG +SFRREKF+EFGGPDGG GGRGGDVW++A LNTLID+R Sbjct: 1 MKFLDQAKIYIRSGNGGAGAVSFRREKFLEFGGPDGGDGGRGGDVWVEAVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RN +G KG+DVVL VPVGTQ+FEED +LICD+ + GQR LA G Sbjct: 61 YQQHFKAKTGMHGMGRNMTGGKGDDVVLRVPVGTQIFEEDNETLICDITEVGQRYRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG G E+ IWL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNLHFTTSTNRAPRRANPGQEGIERTIWLRLKLIADAGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+ + +EF++ADIPG+I+ A +G G+GDRFL H ERT VL Sbjct: 181 AAKPKIADYPFTTLHPNLGVARIDGREFVIADIPGLIEGASEGVGLGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH VSA EE+V AYQ I EL AY L K EIV LSQ+DT+D +T K L C Sbjct: 241 LHPVSAQEEDVAKAYQVIRGELEAYEHGLADKPEIVALSQVDTLDPETRKAKVKALKKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G P S+++ G+ L L I R E Sbjct: 301 GCEPLLLSAVSHEGLNDTLRQLARIIDLSRAE 332 >gi|319406132|emb|CBI79771.1| GTP-binding protein [Bartonella sp. AR 15-3] Length = 337 Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust. Identities = 205/335 (61%), Positives = 250/335 (74%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVYIRSG+GGAG +SFRREKFIEFGGPDGG+GGRGGDVW LNTLID+R Sbjct: 1 MKFLDQAKVYIRSGNGGAGAVSFRREKFIEFGGPDGGNGGRGGDVWALVVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF+A+ G G RN +G KG+D++L VPVGTQ+FEED +LICDL + GQR LA G Sbjct: 61 YQQHFRAKTGGHGKGRNMTGVKGDDIILKVPVGTQIFEEDNKTLICDLIEVGQRYRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP +ANPG+ G+E+ +WL+LKLIAD G++GLPNAGKSTFLA+VT Sbjct: 121 GNGGFGNLHFTTSTNRAPRHANPGLSGEERTLWLRLKLIADGGLVGLPNAGKSTFLAAVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTLYP+LG+ +EFILADIPG+I+ AH+G GIGDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLYPHLGVASIDAREFILADIPGLIEGAHEGVGIGDRFLGHIERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE++ AY I EL AY +L K EIV LSQIDT+ A K+ L Sbjct: 241 LHLVSAQEEDIAKAYYTIRHELEAYGHDLSDKTEIVALSQIDTLSIRERAVKQEILQRAS 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 G+ FS+++ G+ +L + I R N + Sbjct: 301 GKSVMMFSAVSHEGLDHVLRAIAHIIEKERKNNVY 335 >gi|86747377|ref|YP_483873.1| GTPase ObgE [Rhodopseudomonas palustris HaA2] gi|123004771|sp|Q2J3J8|OBG_RHOP2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|86570405|gb|ABD04962.1| Small GTP-binding protein domain [Rhodopseudomonas palustris HaA2] Length = 353 Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust. Identities = 200/322 (62%), Positives = 247/322 (76%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGG G ++FRREKFIEFGGP+GG+GGRGGDV ++A LNTLID+R Sbjct: 1 MKFLDEAKVYIRSGDGGNGCVAFRREKFIEFGGPNGGNGGRGGDVVVEAADGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKAQ G GM +R GA G+ +VL VPVGTQ+F+ED +LI D G+R +LA G Sbjct: 61 YQQHFKAQKGVNGMGSDRHGANGKAIVLKVPVGTQIFDEDKETLIHDFTTVGERFVLAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTN+AP +ANPG+ G+E+ IWL+LKLIAD G++GLPNAGKSTFL+ V+ Sbjct: 121 GNGGFGNAHFKSSTNRAPRHANPGLPGEERWIWLRLKLIADAGLVGLPNAGKSTFLSKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V +EF+LADIPG+I+ AH+GAG+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPQLGVVNADGREFVLADIPGLIEGAHEGAGLGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ A E+ AY+ + EL AY L KIEIV L++ID V+ D L ++K+ L Sbjct: 241 LHLIDATCEHAGKAYKTVRGELEAYAETLADKIEIVALNKIDAVEPDELKKQKDRLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 + P S ITG G+P+ L L Sbjct: 301 KKTPLLISGITGQGVPEALRAL 322 >gi|294851086|ref|ZP_06791762.1| obg family GTPase CgtA [Brucella sp. NVSL 07-0026] gi|294821729|gb|EFG38725.1| obg family GTPase CgtA [Brucella sp. NVSL 07-0026] Length = 341 Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust. Identities = 210/332 (63%), Positives = 249/332 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG+GGAG +SFRREKF+EFGGPDGG GGRGGDVW++A LNTLID+R Sbjct: 1 MKFLDQAKIYIRSGNGGAGAVSFRREKFLEFGGPDGGDGGRGGDVWVEAVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RN +G KG+DVVL VPVGTQ+FEED +LICD+ + GQR LA G Sbjct: 61 YQQHFKAKTGMHGMGRNMTGGKGDDVVLRVPVGTQIFEEDNETLICDITEVGQRYRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG G E+ IWL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNLHFTTSTNRAPRRANPGQEGIERTIWLRLKLIADAGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+ + EF++ADIPG+I+ A +G G+GDRFL H ERT VL Sbjct: 181 AAKPKIADYPFTTLHPNLGVARIDGCEFVIADIPGLIEGASEGVGLGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AYQ I EL AY L K EIV LSQ+DT+D +T K L C Sbjct: 241 LHLVSAQEEDVAKAYQVIRGELEAYEHGLADKPEIVALSQVDTLDPETRKAKVKALKKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G P S+++ G+ L L I R E Sbjct: 301 GCEPLLLSAVSHEGLNDTLRQLARIIDLSRAE 332 >gi|39933239|ref|NP_945515.1| GTPase ObgE [Rhodopseudomonas palustris CGA009] gi|81829804|sp|Q6NDE6|OBG_RHOPA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|39652864|emb|CAE25606.1| possible GTP-binding proteins [Rhodopseudomonas palustris CGA009] Length = 353 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 198/322 (61%), Positives = 249/322 (77%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGG G ++FRREKFIEFGGP+GG+GGRGGD+ ++A LNTLID+R Sbjct: 1 MKFLDEAKVYIRSGDGGNGCVAFRREKFIEFGGPNGGNGGRGGDIIVEAADGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKAQ G GM +R GA G+D+V+ VPVGTQ+F+ED +LI D + G+R +LA G Sbjct: 61 YQQHFKAQKGGNGMGSDRHGAGGKDIVMKVPVGTQIFDEDKETLIHDFTKVGERFVLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTN+AP +ANPG+ G+E+ IWL+LKLIAD G++GLPNAGKSTFL+ V+ Sbjct: 121 GNGGFGNAHFKSSTNRAPRHANPGLPGEERWIWLRLKLIADAGLVGLPNAGKSTFLSKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V +EF+LADIPG+I+ AH+GAG+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPQLGVVNSDGREFVLADIPGLIEGAHEGAGLGDRFLGHIERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ A E+ AY+ + EL AY L KIEIV L++ID V+ D L ++K+ L Sbjct: 241 LHLIDATCEHAGKAYKTVRGELEAYAETLVDKIEIVALNKIDAVEPDELKKQKDRLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 + P S +TG G+P+ L L Sbjct: 301 KKTPLLLSGVTGQGVPEALRAL 322 >gi|49473816|ref|YP_031858.1| GTPase ObgE [Bartonella quintana str. Toulouse] gi|81647275|sp|Q6G0S8|OBG_BARQU RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|49239319|emb|CAF25649.1| GTP-binding protein [Bartonella quintana str. Toulouse] Length = 341 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 202/332 (60%), Positives = 249/332 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVYIRSG+GGAG +SFRREKFIEFGGPDGG GGRGGDVW LNTLID+R Sbjct: 1 MKFLDQAKVYIRSGNGGAGAVSFRREKFIEFGGPDGGDGGRGGDVWALVVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF+A+ G G RN +G KG D++L VPVGTQ+FEED +LICDL + GQR LA G Sbjct: 61 YQQHFRAKTGGHGKGRNMTGEKGNDIILKVPVGTQIFEEDNTTLICDLTEVGQRYRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STNQAP ANPG++G+E+ +WL+LKLIAD G+IGLPNAGKSTFLASVT Sbjct: 121 GNGGFGNLHFMNSTNQAPRRANPGLVGEERTLWLRLKLIADAGLIGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPK+ADYPFTTLYP+LG+ + +EF+LADIPG+I+ AH+G G+GDRFL H ER VL Sbjct: 181 AAKPKVADYPFTTLYPHLGVARIDAREFVLADIPGLIEGAHEGVGLGDRFLGHIERCCVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 H++SA EE+V AYQ + +EL AY + L K EIV +SQIDT+ + K+ L Sbjct: 241 FHLISAQEEDVAKAYQIVRNELKAYGNNLSDKTEIVAISQIDTLTLEERKVKQEVLQRVT 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G+ FS+++G + +L I +R E Sbjct: 301 GKSVMMFSAVSGESLEAMLRAGAHMIEMVRKE 332 >gi|239832932|ref|ZP_04681261.1| GTP-binding protein Obg/CgtA [Ochrobactrum intermedium LMG 3301] gi|239825199|gb|EEQ96767.1| GTP-binding protein Obg/CgtA [Ochrobactrum intermedium LMG 3301] Length = 341 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 204/322 (63%), Positives = 248/322 (77%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG+GGAG +SFRREKF+EFGGPDGG GGRGGDVW++A LNTLID+R Sbjct: 1 MKFLDQAKIYIRSGNGGAGAVSFRREKFLEFGGPDGGDGGRGGDVWVEAVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF+A+ G GM RN +G KG+DVVL VPVGTQ+FEED +LICD+ + GQR LA G Sbjct: 61 YQQHFRAKTGMHGMGRNMTGGKGDDVVLKVPVGTQIFEEDDETLICDITEIGQRYRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG G E+ IWL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNLHFTTSTNRAPRRANPGQEGIERTIWLRLKLIADAGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+ + +EF++ADIPG+I+ A +G G+GDRFL H ERT VL Sbjct: 181 AAKPKIADYPFTTLHPNLGVARVDGREFVIADIPGLIEGASEGVGLGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AY+ I EL AY L K EIV LSQ+DT+D++ K L C Sbjct: 241 LHLVSAQEEDVAKAYRVIRGELEAYEHGLADKPEIVALSQVDTLDAEARKAKVKALKKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 G+ P S+++ G+ L L Sbjct: 301 GRDPLLLSAVSHEGLNDALRQL 322 >gi|163867452|ref|YP_001608651.1| GTPase ObgE [Bartonella tribocorum CIP 105476] gi|261266750|sp|A9IMA6|OBG_BART1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|161017098|emb|CAK00656.1| GTP-binding protein [Bartonella tribocorum CIP 105476] Length = 341 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 201/321 (62%), Positives = 245/321 (76%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVYIRSG+GG+G +SFRREKFIEFGGPDGG+GGRGGDVW LNTLID+R Sbjct: 1 MKFLDQAKVYIRSGNGGSGAVSFRREKFIEFGGPDGGNGGRGGDVWALVVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G G RN +G KG DV+L VPVGTQ+FEED +LICDL + GQR LA G Sbjct: 61 YQQHFKAKTGGHGKGRNMTGEKGGDVILKVPVGTQIFEEDNTTLICDLTEVGQRYRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG+ G+E+ IWL+LKLIAD G++GLPNAGKSTFL+SVT Sbjct: 121 GNGGFGNLHFTTSTNRAPRRANPGLAGEERAIWLRLKLIADAGLVGLPNAGKSTFLSSVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPK+ADYPFTTL+P+LG+V+ +EF+LADIPG+I+ AH+G GIGDRFL H ER VL Sbjct: 181 AAKPKVADYPFTTLHPHLGVVRIDGREFVLADIPGLIEGAHEGVGIGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++SA EE+V AYQ + EL AY + L K EIV LSQIDT+ + K+ L Sbjct: 241 LHLISAQEEDVAKAYQIVRHELEAYGNNLSDKTEIVALSQIDTLTIEERKMKQKALRRVT 300 Query: 301 GQVPFEFSSITGHGIPQILEC 321 Q FS+++ G+ +L Sbjct: 301 DQPVMMFSAVSREGLENVLRA 321 >gi|49474970|ref|YP_033011.1| GTPase ObgE [Bartonella henselae str. Houston-1] gi|81648295|sp|Q6G4Z2|OBG_BARHE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|49237775|emb|CAF26968.1| GTP-binding protein [Bartonella henselae str. Houston-1] Length = 340 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 201/321 (62%), Positives = 245/321 (76%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVYIRSG+GGAG ISFRREKFIEFGGPDGG GGRGGDVW LNTLID+R Sbjct: 1 MKFLDQAKVYIRSGNGGAGAISFRREKFIEFGGPDGGDGGRGGDVWALVVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF+A+ G G RN +G KG+D++L VPVGTQ+FEED +LICDL + GQR LA G Sbjct: 61 YQQHFRAKTGGHGKGRNMTGQKGDDIILKVPVGTQIFEEDNTTLICDLTEVGQRYRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG+ G+E+ +WL+LKLIAD GIIGLPNAGKSTFLASVT Sbjct: 121 GNGGFGNLHFTTSTNRAPRRANPGLSGEERTLWLRLKLIADAGIIGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPK+ADYPFTTLYP+LG+ + +EF+LADIPG+I+ AH+G GIGDRFL H ER VL Sbjct: 181 AAKPKVADYPFTTLYPHLGVARIDAREFVLADIPGLIEGAHEGVGIGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 H++SA EE+V AYQ + +EL AY + L K EI+ LSQIDT+ + K+ L Sbjct: 241 FHLISAQEEDVVKAYQIVRNELKAYGNNLNDKTEIIALSQIDTLTIEERKAKQEFLQKVT 300 Query: 301 GQVPFEFSSITGHGIPQILEC 321 G+ FS+++ G+ +L Sbjct: 301 GKSVMMFSAVSREGLENLLRA 321 >gi|91975064|ref|YP_567723.1| GTPase ObgE [Rhodopseudomonas palustris BisB5] gi|122969178|sp|Q13DL7|OBG_RHOPS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|91681520|gb|ABE37822.1| Small GTP-binding protein domain [Rhodopseudomonas palustris BisB5] Length = 353 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 198/322 (61%), Positives = 248/322 (77%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGG G ++FRREKFIEFGGP+GG+GGRGGDV ++A LNTLID+R Sbjct: 1 MKFLDEAKVYIRSGDGGNGCVAFRREKFIEFGGPNGGNGGRGGDVVVEAADGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKAQ G GM +R GA G+D+VL VPVGTQ+ +ED +L+ D + G+R +LA G Sbjct: 61 YQQHFKAQKGVNGMGSDRHGANGKDIVLKVPVGTQIIDEDKETLLHDFTKVGERFVLAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTN+AP +ANPG+ G+E+ IWL+LKLIAD G++GLPNAGKSTFL+ V+ Sbjct: 121 GNGGFGNAHFKSSTNRAPRHANPGLPGEERWIWLRLKLIADAGLVGLPNAGKSTFLSKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V +EF+LADIPG+I+ AH+GAG+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPQLGVVNSDGREFVLADIPGLIEGAHEGAGLGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ A E+ AY+ + EL AY L KIEIV L++ID V+ D L ++K+ L Sbjct: 241 LHLIDATCEHAGKAYKTVRGELEAYADTLTDKIEIVALNKIDAVEPDELKKQKDRLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 + P S +TG G+P+ L L Sbjct: 301 KKTPLLISGVTGAGVPEALRAL 322 >gi|153008388|ref|YP_001369603.1| GTPase ObgE [Ochrobactrum anthropi ATCC 49188] gi|261277650|sp|A6WXS0|OBG_OCHA4 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|151560276|gb|ABS13774.1| GTP-binding protein Obg/CgtA [Ochrobactrum anthropi ATCC 49188] Length = 341 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/326 (63%), Positives = 249/326 (76%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG+GGAG +SFRREKF+EFGGPDGG GGRGGDVW++A + LNTLID+R Sbjct: 1 MKFLDQAKIYIRSGNGGAGAVSFRREKFLEFGGPDGGDGGRGGDVWVEAVNGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF+A+ G GM RN +G KG+DV+L VPVGTQ+FEED +LICD+ + GQR LA G Sbjct: 61 YQQHFRAKTGMHGMGRNMTGGKGDDVILKVPVGTQIFEEDDETLICDITEIGQRYRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG G E+ IWL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNLHFTTSTNRAPRRANPGQEGIERTIWLRLKLIADAGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+ + +EF++ADIPG+I+ A +G G+GDRFL H ERT VL Sbjct: 181 AAKPKIADYPFTTLHPNLGVARVDGREFVIADIPGLIEGASEGVGLGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AYQ I EL AY L K EIV LSQIDT+D + K L C Sbjct: 241 LHLVSAQEEDVAKAYQVIRGELEAYEHGLADKPEIVALSQIDTLDPEARKAKVKALKKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G+ P S+++ G+ L L I Sbjct: 301 GRDPLLLSAVSHEGLNDALRQLASVI 326 >gi|170742341|ref|YP_001770996.1| GTP-binding protein Obg/CgtA [Methylobacterium sp. 4-46] gi|261266857|sp|B0UMS4|OBG_METS4 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|168196615|gb|ACA18562.1| GTP-binding protein Obg/CgtA [Methylobacterium sp. 4-46] Length = 343 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 201/322 (62%), Positives = 243/322 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVY+RSGDGGAG +SFRREKFIEFGGPDGG GGRGGDVW + LNTLID+R Sbjct: 1 MKFLDEAKVYVRSGDGGAGCVSFRREKFIEFGGPDGGDGGRGGDVWAECVEGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ GE G RNR+GAKG DVVL VP GTQ+ ED +L+ DL + GQR++LA G Sbjct: 61 YQQHFKAKKGEHGSGRNRAGAKGGDVVLKVPAGTQILAEDRETLVADLTRVGQRVLLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNA+F +STN+AP +ANPG GQE +WL+LKLIAD G++GLPNAGKSTFLA+VT Sbjct: 121 GNGGFGNAYFTTSTNRAPRHANPGQEGQEHWLWLRLKLIADAGLVGLPNAGKSTFLATVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V+ +EF+LADIPG+I+ AH+G G+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPGLGVVRVDTREFVLADIPGLIEGAHEGVGLGDRFLAHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E+ AAY+ + EL AY L K EIV LS+ D +D + L + L C Sbjct: 241 LHLVEGTSEDAGAAYRLVRAELEAYGHGLADKPEIVALSKADILDPERLEAQVASLEAAC 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 G+ P S+ T G+P+ L L Sbjct: 301 GRRPLVISAATRRGVPEALRAL 322 >gi|319408133|emb|CBI81786.1| GTP-binding protein [Bartonella schoenbuchensis R1] Length = 340 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 201/326 (61%), Positives = 247/326 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG+GGAG +SFRREK+IEFGGPDGG+GGRGGDVW+ LNTLID+R Sbjct: 1 MKFLDQAKIYIRSGNGGAGAVSFRREKYIEFGGPDGGNGGRGGDVWVIVVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF+A+ G G RN +G KGEDVVL VPVGTQ+F ED +LICDL + GQR LA G Sbjct: 61 YQQHFRAKTGGHGKGRNMTGEKGEDVVLKVPVGTQIFAEDNETLICDLKEVGQRYCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP++ANPG+ G+E +WL+LKLIAD G+IGLPNAGKSTFL+SVT Sbjct: 121 GNGGFGNLHFATSTNRAPHHANPGLSGEEHTLWLRLKLIADGGLIGLPNAGKSTFLSSVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIA YPFTTLYP+LG+V+ EF+LADIPG+I+ AH+G GIGDRFL H ER VL Sbjct: 181 AAKPKIASYPFTTLYPHLGVVRIDDSEFVLADIPGLIEGAHEGVGIGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++S EE+V AYQ I EL AY + L K EIV LSQIDT+ + K+ L Sbjct: 241 IHLISVQEEDVVKAYQIIRTELEAYGNSLSDKNEIVALSQIDTLSIEECKAKQEMLQKAI 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G+ FS+++ G+ +L + I Sbjct: 301 GKSVMMFSAVSHEGLNNVLRVVTHMI 326 >gi|209883759|ref|YP_002287616.1| GTP-binding protein Obg/CgtA [Oligotropha carboxidovorans OM5] gi|261277651|sp|B6JD21|OBG_OLICO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|209871955|gb|ACI91751.1| GTP-binding protein Obg/CgtA [Oligotropha carboxidovorans OM5] Length = 356 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 198/326 (60%), Positives = 250/326 (76%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGG G ++FRREKFIE+GGP+GG+GGRGGDV I+ LNTLID+R Sbjct: 1 MKFLDEAKVYIRSGDGGNGCVAFRREKFIEYGGPNGGNGGRGGDVIIETVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKAQ G GM +R GA G+D+VL VPVGTQVF+ED +L+ D + G+R ++A G Sbjct: 61 YQQHFKAQKGGHGMGSDRHGAGGDDIVLKVPVGTQVFDEDRETLLHDFTRLGERFVIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTN+AP +ANPG G+E+ IWL++KLIAD G++GLPNAGKSTFL+ V+ Sbjct: 121 GNGGFGNAHFKSSTNRAPRHANPGQPGEERWIWLRMKLIADAGLVGLPNAGKSTFLSVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V+ +EF+LADIPG+I+ AH+G G+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPQLGVVRSDGREFVLADIPGLIEGAHEGTGLGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V A E+ AY+ + +EL+AY +L K+EIV L++ID V + L +K L Sbjct: 241 LHLVDATCEHAGKAYKIVRNELAAYEHDLTDKVEIVALNKIDAVTPEQLKEQKARLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 Q P S +TG G+P++L L D I Sbjct: 301 KQTPMLVSGVTGEGVPEVLRALTDVI 326 >gi|195970127|ref|NP_387265.3| GTPase ObgE [Sinorhizobium meliloti 1021] gi|15076185|emb|CAC47738.1| Putative GTP-binding protein [Sinorhizobium meliloti 1021] Length = 376 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 217/326 (66%), Positives = 253/326 (77%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDE KVYIRSGDGGAG +SFRREKFIEFGGPDGG GGRGGDVW++A + LNTLIDFR Sbjct: 41 MKFLDETKVYIRSGDGGAGAVSFRREKFIEFGGPDGGDGGRGGDVWVEAVNGLNTLIDFR 100 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RNR+GAKG DV L VPVGTQ+FEED +LI D+ EGQR LA G Sbjct: 101 YQQHFKAKTGTHGMGRNRTGAKGGDVTLKVPVGTQIFEEDNETLIVDMVAEGQRYRLAAG 160 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTNQAP +ANPG+ G+EK IWL+LKLIAD G++GLPNAGKSTFLA+ T Sbjct: 161 GNGGFGNAHFKSSTNQAPSWANPGLEGEEKTIWLRLKLIADAGLVGLPNAGKSTFLAACT 220 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIA+YPFTTL+PNLG+ KEFI+ADIPG+I+ AH+G GIGDRFL H ERT VL Sbjct: 221 RARPKIANYPFTTLHPNLGVATIDEKEFIIADIPGLIEGAHEGVGIGDRFLGHVERTRVL 280 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AY+ + EL AY L +K +IV LSQID +D + L K L C Sbjct: 281 LHLVSAQEEDVAKAYKTVKHELEAYGGGLEEKPQIVALSQIDVLDEEELKAKAKALGKAC 340 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G P S++T G+ + L L I Sbjct: 341 GTPPLLISAVTNKGMTEALRALRSVI 366 >gi|170746555|ref|YP_001752815.1| GTP-binding protein Obg/CgtA [Methylobacterium radiotolerans JCM 2831] gi|261266856|sp|B1M697|OBG_METRJ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|170653077|gb|ACB22132.1| GTP-binding protein Obg/CgtA [Methylobacterium radiotolerans JCM 2831] Length = 342 Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust. Identities = 198/326 (60%), Positives = 244/326 (74%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVY+RSGDGG G +SFRREKFIEFGGP+GG GGRGGDVW++ LNTLID+R Sbjct: 1 MKFLDEAKVYVRSGDGGPGCVSFRREKFIEFGGPNGGDGGRGGDVWVECVEGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ GE GM N GA G D VL VP GTQ+F EDG +L+ DL + GQ+I LA G Sbjct: 61 YQQHFKAKKGEHGMGSNCHGANGADTVLKVPAGTQIFSEDGETLLADLTEVGQKIRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNA+F +STN+AP +ANPG GQE IWL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNAYFTTSTNRAPKHANPGQEGQEMWIWLRLKLIADAGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V+ +EF+LADIPG+I+ AH+G G+GD+FL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPGLGVVRSDGREFVLADIPGLIEGAHEGVGLGDKFLAHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E+ Y+ + E+ AY + L +K EIV LS+ D +D+DTL + +L Sbjct: 241 LHLVDGTSEHAGKTYKLVRGEIEAYGNGLAEKPEIVALSKADALDADTLKSQVAKLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G+ P SS + G+P+ L L +I Sbjct: 301 GRAPLILSSASRKGVPEALRALQTEI 326 >gi|146337577|ref|YP_001202625.1| GTPase ObgE [Bradyrhizobium sp. ORS278] gi|261266688|sp|A4YKF3|OBG_BRASO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|146190383|emb|CAL74379.1| GTP-binding protein with nucleoside triP hydrolase domain; DNA-binding GTPase involved in cell partioning; multicopy suppresssor of ftsJ(rrmJ) [Bradyrhizobium sp. ORS278] Length = 356 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 199/326 (61%), Positives = 248/326 (76%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVY+RSGDGG G ++FRREKFIEFGGP+GG+GGRGGDV I+A LNTLID+R Sbjct: 1 MKFLDEAKVYVRSGDGGNGCVAFRREKFIEFGGPNGGNGGRGGDVVIEAVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKAQ GE GM ++R GA G+ +VL VPVGTQ+F+ED +LI D G+R +LA G Sbjct: 61 YQQHFKAQKGENGMGKDRHGAGGKSIVLKVPVGTQIFDEDRETLIHDFTAVGERFVLAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKS TN+AP +ANPG G+E+ IWL++KLIAD G++GLPNAGKSTFL+ V+ Sbjct: 121 GNGGFGNAHFKSPTNRAPRHANPGQPGEERWIWLRMKLIADAGLVGLPNAGKSTFLSKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V +EF+LADIPG+I+ AH+GAG+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPQLGVVNADGREFVLADIPGLIEGAHEGAGLGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V A E+ AY+ + EL AY +L KIEIV L++ID VD D L ++++ L Sbjct: 241 LHLVDATCEHAGKAYKTVRHELEAYGGDLTDKIEIVALNKIDAVDPDELKKQRDRLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 + P S TG G+ + L L D + Sbjct: 301 KKTPILISGATGEGVKEALRKLADVV 326 >gi|307301684|ref|ZP_07581443.1| GTP-binding protein Obg/CgtA [Sinorhizobium meliloti BL225C] gi|307316293|ref|ZP_07595737.1| GTP-binding protein Obg/CgtA [Sinorhizobium meliloti AK83] gi|261277916|sp|Q92LB4|OBG_RHIME RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|306898133|gb|EFN28875.1| GTP-binding protein Obg/CgtA [Sinorhizobium meliloti AK83] gi|306903382|gb|EFN33971.1| GTP-binding protein Obg/CgtA [Sinorhizobium meliloti BL225C] Length = 336 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 217/326 (66%), Positives = 253/326 (77%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDE KVYIRSGDGGAG +SFRREKFIEFGGPDGG GGRGGDVW++A + LNTLIDFR Sbjct: 1 MKFLDETKVYIRSGDGGAGAVSFRREKFIEFGGPDGGDGGRGGDVWVEAVNGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RNR+GAKG DV L VPVGTQ+FEED +LI D+ EGQR LA G Sbjct: 61 YQQHFKAKTGTHGMGRNRTGAKGGDVTLKVPVGTQIFEEDNETLIVDMVAEGQRYRLAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTNQAP +ANPG+ G+EK IWL+LKLIAD G++GLPNAGKSTFLA+ T Sbjct: 121 GNGGFGNAHFKSSTNQAPSWANPGLEGEEKTIWLRLKLIADAGLVGLPNAGKSTFLAACT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIA+YPFTTL+PNLG+ KEFI+ADIPG+I+ AH+G GIGDRFL H ERT VL Sbjct: 181 RARPKIANYPFTTLHPNLGVATIDEKEFIIADIPGLIEGAHEGVGIGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AY+ + EL AY L +K +IV LSQID +D + L K L C Sbjct: 241 LHLVSAQEEDVAKAYKTVKHELEAYGGGLEEKPQIVALSQIDVLDEEELKAKAKALGKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G P S++T G+ + L L I Sbjct: 301 GTPPLLISAVTNKGMTEALRALRSVI 326 >gi|319899271|ref|YP_004159364.1| GTP-binding protein [Bartonella clarridgeiae 73] gi|319403235|emb|CBI76794.1| GTP-binding protein [Bartonella clarridgeiae 73] Length = 337 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 201/322 (62%), Positives = 245/322 (76%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVYIRSG+GGAG +SFRREKFIEFGGPDGG+GGRGGDVW LNTLID+R Sbjct: 1 MKFLDQAKVYIRSGNGGAGAVSFRREKFIEFGGPDGGNGGRGGDVWALVVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF+A+ G G RN +G KG+D++L VPVGTQ+FEED +LICDL + GQR LA G Sbjct: 61 YQQHFRAKTGGHGRGRNMTGVKGDDIILKVPVGTQIFEEDNKTLICDLIKVGQRYRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP +AN G+ G+E+ +WL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNLHFTTSTNRAPRHANSGLRGEERTLWLRLKLIADGGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIA+YPFTTLYP+LG+ +EF+LADIPG+I+ AH+G GIGDRFL H ER VL Sbjct: 181 AAKPKIANYPFTTLYPHLGVASIDAREFVLADIPGLIEGAHEGIGIGDRFLGHVERCPVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AY I EL AY L K EIV LSQIDT+ + A K+ L Sbjct: 241 LHLVSAQEEDVAKAYHTIRHELEAYGHHLSDKTEIVALSQIDTLPIEERAVKQEMLQKAS 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 G+ FS+++ G+ +L + Sbjct: 301 GKSVMMFSAVSHEGLDNVLRAI 322 >gi|227823684|ref|YP_002827657.1| GTPase ObgE [Sinorhizobium fredii NGR234] gi|261277739|sp|C3M9X9|OBG_RHISN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|227342686|gb|ACP26904.1| GTP-binding protein [Sinorhizobium fredii NGR234] Length = 336 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 217/334 (64%), Positives = 254/334 (76%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDE KVYIRSGDGGAG +SF REKFIEFGGPDGG GGRGGDVW++A + LNTLIDFR Sbjct: 1 MKFLDETKVYIRSGDGGAGAVSFHREKFIEFGGPDGGDGGRGGDVWVEAVNGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFK + G GM RNR+GAKG DV L VPVGTQ+FEED +LI D+ EGQR LA G Sbjct: 61 YQQHFKGKTGVHGMGRNRTGAKGADVTLKVPVGTQIFEEDNETLIVDMVAEGQRYRLAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTNQAP +ANPG+ G+EK IWL+LKLIAD G++GLPNAGKSTFLA+ T Sbjct: 121 GNGGFGNAHFKSSTNQAPNWANPGLEGEEKTIWLRLKLIADAGLVGLPNAGKSTFLAACT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIA+YPFTTL+PNLG+ +EFI+ADIPG+I+ AH+G GIGDRFL H ERT VL Sbjct: 181 RARPKIANYPFTTLHPNLGVATVDGREFIIADIPGLIEGAHEGVGIGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AY + EL AY L K +IV LSQ+D +D D L K LA C Sbjct: 241 LHLVSAQEEDVAKAYTTVRHELDAYGGGLEDKPQIVALSQVDVLDDDELKAKSKALAKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 G P S++T G+ + L L D I + + E Sbjct: 301 GSTPLIISAVTNRGMTEALRALRDVISAAKAGEE 334 >gi|319404627|emb|CBI78233.1| GTP-binding protein [Bartonella rochalimae ATCC BAA-1498] Length = 337 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 202/333 (60%), Positives = 246/333 (73%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVYIRSG+GGAG +SFRREKFIEFGGPDGG+GGRGGDVW LNTLID+R Sbjct: 1 MKFLDQAKVYIRSGNGGAGAVSFRREKFIEFGGPDGGNGGRGGDVWALVVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF+A+ G G RN +G KG+DV+L VPVGTQ+FEED +LICDL + GQR LA G Sbjct: 61 YQQHFRAKTGGHGKGRNMTGVKGDDVILKVPVGTQIFEEDNKTLICDLIEVGQRYRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP +ANPG+ G+E+ +WL+LKLIAD G+IGLPNAGKSTFLA+VT Sbjct: 121 GNGGFGNLHFTTSTNRAPRHANPGLSGEERTLWLRLKLIADGGLIGLPNAGKSTFLAAVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIA YPFTTL+P+LG+ +EF+LADIPG+I+ AH+G GIGDRFL H ER VL Sbjct: 181 AAKPKIASYPFTTLHPHLGVASVDAREFVLADIPGLIEGAHEGVGIGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE+V AY I EL+ Y L K EIV LSQIDT+ + K+ L Sbjct: 241 LHLVSAQEEDVAKAYHTIRHELTLYGHHLSDKTEIVALSQIDTLPIEERVVKQEMLQKAS 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 G+ S+++ G+ +L + I R N Sbjct: 301 GKSVMMVSAVSHEGLDHVLRAIAHIIEKERTNN 333 >gi|163853806|ref|YP_001641849.1| GTP-binding protein Obg/CgtA [Methylobacterium extorquens PA1] gi|218532750|ref|YP_002423566.1| GTP-binding protein Obg/CgtA [Methylobacterium chloromethanicum CM4] gi|240141258|ref|YP_002965738.1| small GTP-binding protein, putative GTPase [Methylobacterium extorquens AM1] gi|261266890|sp|B7KSH0|OBG_METC4 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266891|sp|A9VYM4|OBG_METEP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|163665411|gb|ABY32778.1| GTP-binding protein Obg/CgtA [Methylobacterium extorquens PA1] gi|218525053|gb|ACK85638.1| GTP-binding protein Obg/CgtA [Methylobacterium chloromethanicum CM4] gi|240011235|gb|ACS42461.1| small GTP-binding protein, putative GTPase [Methylobacterium extorquens AM1] Length = 344 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 197/326 (60%), Positives = 244/326 (74%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVY+RSGDGG G +SFRREKFIEFGGP+GG GGRGGDVWI+ LNTLID+R Sbjct: 1 MKFLDEAKVYVRSGDGGPGCVSFRREKFIEFGGPNGGDGGRGGDVWIECVQGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHFKA+ GE GM N GAKG+D VL VP GTQVF EDG +LI D+ + GQR+ LA G Sbjct: 61 YRQHFKAKKGEHGMGSNCHGAKGDDAVLQVPAGTQVFAEDGETLIADMTEVGQRVRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNA+F +STN+AP +ANPG+ GQE + L+LKLIAD G++GLPNAGKSTFLA+VT Sbjct: 121 GNGGFGNAYFTTSTNRAPRHANPGLEGQEMWLILRLKLIADAGLVGLPNAGKSTFLATVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V+ +EF+LADIPG+I+ AH+G G+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPGLGVVRSDEREFVLADIPGLIEGAHEGVGLGDRFLAHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E+ AY+ + EL AY L K EIV LS+ D +D+DTL ++ L Sbjct: 241 LHLVEGTSEHAGKAYKLVRRELEAYGEGLSDKPEIVALSKADALDADTLKQQLARLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G P S+ +G G+ + L + ++ Sbjct: 301 GGKPLVLSAASGQGVQEALRAIQAQL 326 >gi|300021739|ref|YP_003754350.1| GTP-binding protein Obg/CgtA [Hyphomicrobium denitrificans ATCC 51888] gi|299523560|gb|ADJ22029.1| GTP-binding protein Obg/CgtA [Hyphomicrobium denitrificans ATCC 51888] Length = 346 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 196/326 (60%), Positives = 243/326 (74%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YI+SG GG G ++FRREKFIEFGGP+GG GG GGDVW++ NLNTLID+R Sbjct: 1 MKFLDQAKIYIKSGAGGNGCVAFRREKFIEFGGPNGGDGGNGGDVWVECVQNLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF AQ G GM +NR+G G D + VP GTQVF EDG +L+ DL + G R+ LA G Sbjct: 61 YQQHFSAQSGTPGMGQNRAGPNGRDCTVKVPPGTQVFAEDGETLLADLTEPGARVRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTNQAP +ANPG G+E IWL+LKLIAD ++GLPNAGKSTFLA+V+ Sbjct: 121 GNGGFGNAHFKSSTNQAPRHANPGQPGEELTIWLRLKLIADAALVGLPNAGKSTFLATVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+V+ G +F+LADIPG+I+ A +GAG+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPNLGVVRAGDVDFVLADIPGLIEGASEGAGLGDRFLGHIERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V A +V Y+ + EL AY L KK EIV LS+ID +D +TLA ++ L Sbjct: 241 LHLVDATSADVAGDYKTVRRELKAYGGALEKKKEIVALSKIDALDEETLAERREALKKAA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 + P S+++G GI + L L +I Sbjct: 301 RKTPLLLSAVSGAGIKEALFALTREI 326 >gi|299135464|ref|ZP_07028654.1| GTP-binding protein Obg/CgtA [Afipia sp. 1NLS2] gi|298589872|gb|EFI50077.1| GTP-binding protein Obg/CgtA [Afipia sp. 1NLS2] Length = 356 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 196/326 (60%), Positives = 249/326 (76%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGG G ++FRREKFIE+GGP+GG+GGRGGDV I+A LNTLID+R Sbjct: 1 MKFLDEAKVYIRSGDGGNGCVAFRREKFIEYGGPNGGNGGRGGDVIIEAVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKAQ G GM +R GA G+D+VL VPVGTQVF+ED +L+ D + G++ ++A G Sbjct: 61 YQQHFKAQKGGHGMGSDRHGAGGKDIVLKVPVGTQVFDEDRETLLHDFTKLGEKFVIAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTN+AP +ANPG G+E+ IWL++KLIAD G++GLPNAGKSTFL+ V+ Sbjct: 121 GNGGFGNAHFKSSTNRAPRHANPGQPGEERWIWLRMKLIADAGLVGLPNAGKSTFLSVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V +EF+LADIPG+I+ AH+G G+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPQLGVVHVDGREFVLADIPGLIEGAHEGTGLGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V A E+ AY+ + +EL+AY +L K+E+V L++ID V + L +K L Sbjct: 241 LHLVDATCEHAGKAYKTVRNELAAYEHDLTSKVEVVALNKIDAVTPEHLKEQKARLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 Q P S +T G+P++L L D I Sbjct: 301 KQTPMLLSGVTREGVPEVLRALADVI 326 >gi|254563767|ref|YP_003070862.1| small GTP-binding protein, GTPase [Methylobacterium extorquens DM4] gi|254271045|emb|CAX27052.1| small GTP-binding protein, putative GTPase [Methylobacterium extorquens DM4] Length = 344 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 197/323 (60%), Positives = 242/323 (74%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVY+RSGDGG G +SFRREKFIEFGGP+GG GGRGGDVWI+ LNTLID+R Sbjct: 1 MKFLDEAKVYVRSGDGGPGCVSFRREKFIEFGGPNGGDGGRGGDVWIECVQGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHFKA+ GE GM N GAKG+D VL VP GTQVF EDG +LI D+ + GQR+ LA G Sbjct: 61 YRQHFKAKKGEHGMGSNCHGAKGDDAVLQVPAGTQVFAEDGETLIADMTEVGQRVRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNA+F +STN+AP +ANPG+ GQE + L+LKLIAD G++GLPNAGKSTFLA+VT Sbjct: 121 GNGGFGNAYFTTSTNRAPRHANPGLEGQEMWLILRLKLIADAGLVGLPNAGKSTFLATVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V+ +EF+LADIPG+I+ AH+G G+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPGLGVVRSDEREFVLADIPGLIEGAHEGVGLGDRFLAHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E+ AY+ + EL AY L K EIV LS+ D +D+DTL ++ L Sbjct: 241 LHLVEGTSEHAGKAYKLVRRELEAYGEGLSDKPEIVALSKADALDADTLKQQLARLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECLH 323 G P S+ +G G+ + L + Sbjct: 301 GGKPLVLSAASGQGVQEALRAIQ 323 >gi|319407618|emb|CBI81270.1| GTP-binding protein [Bartonella sp. 1-1C] Length = 337 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 201/333 (60%), Positives = 246/333 (73%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVYIRSG+GGAG +SFRREKFIEFGGPDGG+GGRGGDVW LNTLID+R Sbjct: 1 MKFLDQAKVYIRSGNGGAGAVSFRREKFIEFGGPDGGNGGRGGDVWALVVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF+A+ G G RN +G KG+DV+L VPVGTQ+FEED +LICDL + GQR LA G Sbjct: 61 YQQHFRAKTGGHGKGRNMTGVKGDDVILKVPVGTQIFEEDNKTLICDLVEVGQRYRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP +ANPG+ G+E+ +WL+LKLIAD G+IGLPNAGKSTFLA+VT Sbjct: 121 GNGGFGNLHFTTSTNRAPRHANPGLSGEERTLWLRLKLIADGGLIGLPNAGKSTFLAAVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIA YPFTTL+P+LG+ +EF+LADIPG+I+ AH+G GIGDRFL H ER VL Sbjct: 181 AAKPKIASYPFTTLHPHLGVASVDAREFVLADIPGLIEGAHEGVGIGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA E++V AY I EL+ Y L K EIV LSQIDT+ + K+ L Sbjct: 241 LHLVSAQEKDVAKAYHTIRHELTLYGHHLNDKTEIVALSQIDTLPIEERVVKQEMLQKAS 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 G+ S+++ G+ +L + I R N Sbjct: 301 GKSVMMVSAVSHEGLDHVLRAIAHIIEKERTNN 333 >gi|115522578|ref|YP_779489.1| GTPase ObgE [Rhodopseudomonas palustris BisA53] gi|122297777|sp|Q07U75|OBG_RHOP5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|115516525|gb|ABJ04509.1| small GTP-binding protein [Rhodopseudomonas palustris BisA53] Length = 349 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 194/322 (60%), Positives = 245/322 (76%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGG G ++FRREK+IEFGGP GG+GGRGGDV I+ LNTLID+R Sbjct: 1 MKFLDEAKVYIRSGDGGNGCVAFRREKYIEFGGPSGGNGGRGGDVVIEVADGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKAQ G GM ++R GA G+D+VL VP GTQ+F+ED +L+ D + G+R +LA G Sbjct: 61 YQQHFKAQKGTNGMGKDRHGANGKDIVLKVPRGTQIFDEDRETLLHDFTELGERFVLAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTN+AP ANPG G+E+ IWL+LKLIAD G++GLPNAGKSTFL+ V+ Sbjct: 121 GNGGFGNAHFKSSTNRAPRNANPGQEGEERWIWLRLKLIADAGLVGLPNAGKSTFLSKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V +EF+LADIPG+I+ AH+GAG+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPQLGVVNVDGREFVLADIPGLIEGAHEGAGLGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ A E+ AY+ + EL AY L K+EIV L++ID V+ + L ++++ L Sbjct: 241 LHLIDATCEHAGKAYKTVRGELDAYAETLSDKVEIVALNKIDAVEPEELKKQRDRLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 + P S +TG G+P+ L L Sbjct: 301 KKTPLLMSGVTGQGVPEALRAL 322 >gi|90421681|ref|YP_530051.1| GTPase ObgE [Rhodopseudomonas palustris BisB18] gi|122477705|sp|Q21D04|OBG_RHOPB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|90103695|gb|ABD85732.1| Small GTP-binding protein domain [Rhodopseudomonas palustris BisB18] Length = 349 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 197/326 (60%), Positives = 247/326 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGG G ++FRREK+IEFGGP GG+GGRGGDV I+ LNTLID+R Sbjct: 1 MKFLDEAKVYIRSGDGGNGCVAFRREKYIEFGGPSGGNGGRGGDVIIEVADGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKAQ G GM ++R GA G+D+VL VPVGTQ+ +ED +LI D + G+R +LA G Sbjct: 61 YQQHFKAQKGTNGMGKDRHGANGKDIVLKVPVGTQILDEDRETLIHDFTKLGERFVLAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTN+AP ANPG G+E+ IWL+LKLIAD G++GLPNAGKST L+ V+ Sbjct: 121 GNGGFGNAHFKSSTNRAPRNANPGQEGEERWIWLRLKLIADAGLVGLPNAGKSTLLSVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V +EF+LADIPG+I+ AH+GAG+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPQLGVVDVDGREFVLADIPGLIEGAHEGAGLGDRFLGHVERCQVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V A E+ AY+ + +EL AY EL K+EIV L++ID V++D L ++K+ L Sbjct: 241 LHLVDATCEHAGKAYKTVRNELMAYAGELTDKVEIVALNKIDAVEADELKKQKDRLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 + P S + G G+ + L L + I Sbjct: 301 KKTPLLISGVAGTGVKEALRALVEVI 326 >gi|159185379|ref|NP_355711.2| GTPase ObgE [Agrobacterium tumefaciens str. C58] gi|261266652|sp|Q7CW97|OBG_AGRT5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|159140630|gb|AAK88496.2| GTP-binding protein [Agrobacterium tumefaciens str. C58] Length = 355 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 217/328 (66%), Positives = 255/328 (77%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYI+SGDGGAG +SFRREKFIEFGGPDGG GGRGGDVW++ + LNTLIDFR Sbjct: 1 MKFLDEAKVYIKSGDGGAGAVSFRREKFIEFGGPDGGDGGRGGDVWVEVVNGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +QQHFKA G+ GM + R+GAKG DVVL VPVGTQ+FEED +LI DL +EGQR LA G Sbjct: 61 FQQHFKASIGQHGMGKTRTGAKGSDVVLKVPVGTQIFEEDNETLIMDLTKEGQRFRLAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNA+FKSSTNQAP +ANPG+ G+EK IWL+LKLIAD G++GLPNAGKSTFLA+VT Sbjct: 121 GNGGFGNAYFKSSTNQAPTHANPGLAGEEKTIWLRLKLIADAGLVGLPNAGKSTFLATVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIA+YPFTTL+PNLG+ +EF+LADIPG+I+ AH+G GIGDRFL H ERT VL Sbjct: 181 RARPKIANYPFTTLHPNLGVATIDGREFVLADIPGLIEGAHEGVGIGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE V AY+ + EL AY L K EIV LSQID +D L +K EL C Sbjct: 241 LHLVSAQEEKVGKAYKTVKAELDAYGGGLTDKPEIVALSQIDVLDEKELKKKAKELEKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFS 328 G+ P S+ G+ + L L D I S Sbjct: 301 GRPPLLLSAAAHIGMTEALRALRDIIVS 328 >gi|325294152|ref|YP_004280016.1| Uncharacterized GTP-binding protein yhbZ;GTPase ObgE [Agrobacterium sp. H13-3] gi|325062005|gb|ADY65696.1| Uncharacterized GTP-binding protein yhbZ;GTPase ObgE [Agrobacterium sp. H13-3] Length = 355 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 216/328 (65%), Positives = 255/328 (77%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAK+YI+SGDGGAG +SFRREKFIEFGGPDGG GGRGGDVWI+ + LNTLIDFR Sbjct: 1 MKFLDEAKIYIKSGDGGAGAVSFRREKFIEFGGPDGGDGGRGGDVWIEVVNGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +QQHFKA G+ GM + R+GAKG DVVL VPVGTQ+FEED +LI DL +EGQR LA G Sbjct: 61 FQQHFKASIGQHGMGKTRTGAKGSDVVLKVPVGTQIFEEDNETLIVDLTKEGQRFRLAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNA+FKSSTNQAP +ANPG+ G+EK +WL+LKLIAD G++GLPNAGKSTFLA+VT Sbjct: 121 GNGGFGNAYFKSSTNQAPTHANPGLAGEEKTLWLRLKLIADAGLVGLPNAGKSTFLATVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIA+YPFTTL+PNLG+ +EF+LADIPG+I+ AH+G GIGDRFL H ERT VL Sbjct: 181 RARPKIANYPFTTLHPNLGVATIDGREFVLADIPGLIEGAHEGVGIGDRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VSA EE V AY+ + EL AY L K EIV LSQID +D L +K EL C Sbjct: 241 LHLVSAQEEKVGQAYKTVKAELDAYGGGLTDKPEIVALSQIDVLDEKELKKKAKELEKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFS 328 G+ P S+ G+ + L L D I S Sbjct: 301 GRPPLLLSAAAHIGMTEALRALRDIIVS 328 >gi|188584104|ref|YP_001927549.1| GTP-binding protein Obg/CgtA [Methylobacterium populi BJ001] gi|261266854|sp|B1ZL15|OBG_METPB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|179347602|gb|ACB83014.1| GTP-binding protein Obg/CgtA [Methylobacterium populi BJ001] Length = 344 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 197/326 (60%), Positives = 241/326 (73%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVY+RSGDGG G +SFRREKFIEFGGP+GG GGRGGDVWI+ LNTLID+R Sbjct: 1 MKFLDEAKVYVRSGDGGPGCVSFRREKFIEFGGPNGGDGGRGGDVWIECVQGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHFKA+ GE GM N GAKG+D VL VP GTQVF EDG +LI D+ + GQR+ LA G Sbjct: 61 YRQHFKARKGEHGMGSNCHGAKGDDAVLQVPAGTQVFAEDGETLIADMTEVGQRVRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNA+F +STN+AP +ANPG GQE + L+LKLIAD G++GLPNAGKSTFLA+VT Sbjct: 121 GNGGFGNAYFTTSTNRAPRHANPGQEGQEMWLILRLKLIADAGLVGLPNAGKSTFLATVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V+ +EF+LADIPG+I+ AH+G G+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPGLGVVRSDAREFVLADIPGLIEGAHEGVGLGDRFLAHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E+ AY+ + EL AY L K EIV LS+ D +D DTL + L Sbjct: 241 LHLVEGTSEHAGKAYKLVRRELEAYGGGLADKPEIVALSKADALDPDTLKNQVARLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G P S+ +G G+ + L + ++ Sbjct: 301 GGKPLVLSAASGQGVQEALRAIQAQL 326 >gi|92116138|ref|YP_575867.1| GTPase ObgE [Nitrobacter hamburgensis X14] gi|122418700|sp|Q1QQU0|OBG_NITHX RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|91799032|gb|ABE61407.1| GTP1/OBG subdomain [Nitrobacter hamburgensis X14] Length = 358 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 194/322 (60%), Positives = 244/322 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGG G ++FRREKFIEFGGP GG+GGRGGDV ++ LNTLID+R Sbjct: 1 MKFLDEAKVYIRSGDGGNGCVAFRREKFIEFGGPSGGNGGRGGDVIVEVADGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA G GM +R GA G+ +VL VP+GTQ+ +ED +LI D G+R +LA G Sbjct: 61 YQQHFKAPKGTNGMGSDRHGANGKAIVLKVPLGTQIIDEDRETLIHDFTTVGERFVLAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTN+AP ANPG G+E+ IWL+LKLIAD G++GLPNAGKSTFL+ V+ Sbjct: 121 GNGGFGNAHFKSSTNRAPRNANPGQPGEERWIWLRLKLIADAGLVGLPNAGKSTFLSKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V G +EF+LADIPG+I+ AH+G G+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPQLGVVNAGDREFVLADIPGLIEGAHEGTGLGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V A E+ AY+ + EL AY L +K+EIV L++ID V + L ++++ L Sbjct: 241 LHLVDATCEHAGKAYKTVRGELEAYAGTLAEKVEIVALNKIDAVSVEDLKKQRDRLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 ++P S ITG G+P++L+ L Sbjct: 301 NKMPLLLSGITGKGVPEVLQTL 322 >gi|148252030|ref|YP_001236615.1| GTPase ObgE [Bradyrhizobium sp. BTAi1] gi|261266687|sp|A5E965|OBG_BRASB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|146404203|gb|ABQ32709.1| GTP-binding protein with nucleoside triP hydrolase domain [Bradyrhizobium sp. BTAi1] Length = 356 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 198/326 (60%), Positives = 245/326 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVY+RSGDGG G ++FRREKFIEFGGP+GG+GGRGGDV I+A LNTLID+R Sbjct: 1 MKFLDEAKVYVRSGDGGNGCVAFRREKFIEFGGPNGGNGGRGGDVVIEAVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKAQ G G ++ GA G+ VVL VPVGTQ+F+ED +LI D G+R +LA G Sbjct: 61 YQQHFKAQRGGNGSGKDCHGAGGKSVVLKVPVGTQIFDEDRETLIHDFTTVGERFVLAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKS TN+AP +ANPG G+E+ IWL++KLIAD G++GLPNAGKSTFL+ V+ Sbjct: 121 GNGGFGNAHFKSPTNRAPRHANPGQPGEERWIWLRMKLIADAGLVGLPNAGKSTFLSKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V +EF+LADIPG+I+ AH+GAG+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPQLGVVNADGREFVLADIPGLIEGAHEGAGLGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V A E+ AY+ + EL AY +L K+EIV L++ID VD D L ++K+ L Sbjct: 241 LHLVDATCEHAGKAYKTVRHELEAYGGDLTDKVEIVALNKIDAVDPDELKKQKDRLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 + P S TG G+ + L L D I Sbjct: 301 KKTPLLISGATGEGVKEALRKLADVI 326 >gi|27375536|ref|NP_767065.1| GTPase ObgE [Bradyrhizobium japonicum USDA 110] gi|81842026|sp|Q89X89|OBG_BRAJA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|27348673|dbj|BAC45690.1| GTP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 346 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 196/322 (60%), Positives = 243/322 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGG G ++FRREKFIEFGGP GG+GGRGG+V I+ LNTLID+R Sbjct: 1 MKFLDEAKVYIRSGDGGNGCVAFRREKFIEFGGPSGGNGGRGGNVIIEVADGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKAQ GE G +R GA G+++VL VP+GTQ+F+ED +LI D G++ +LA G Sbjct: 61 YQQHFKAQKGENGAGSDRHGANGKNIVLKVPMGTQIFDEDRETLIHDFTNVGEKFVLAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTN+AP ANPG G+E+ IWL+LKLIAD G++GLPNAGKSTFL+ V+ Sbjct: 121 GNGGFGNAHFKSSTNRAPRNANPGQPGEERWIWLRLKLIADAGLVGLPNAGKSTFLSKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V +EF+LADIPG+I+ AH+GAG+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPQLGVVNADGREFVLADIPGLIEGAHEGAGLGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V A E+ AY+ + EL AY L KIEIV L++ID V+ D L ++K+ L Sbjct: 241 LHLVDATCEHAGKAYKTVRTELDAYGGLLTDKIEIVALNKIDAVEPDELKKQKDRLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 + P S+ TG G+ + L L Sbjct: 301 KKTPLLLSAATGEGVKEALRAL 322 >gi|46203606|ref|ZP_00051283.2| COG0536: Predicted GTPase [Magnetospirillum magnetotacticum MS-1] Length = 322 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 196/297 (65%), Positives = 234/297 (78%), Gaps = 3/297 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVY+RSGDGG G +SFRREKFIEFGGP+GG GGRGGDVWI+ LNTLID+R Sbjct: 1 MKFLDEAKVYVRSGDGGPGCVSFRREKFIEFGGPNGGDGGRGGDVWIECVQGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHFKA+ GE GM N GAKG+DVVLTVP GTQVF EDG +LI D+ + GQR+ LA G Sbjct: 61 YRQHFKARKGEHGMGSNCHGAKGDDVVLTVPAGTQVFSEDGETLIADMTEIGQRVRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNA+F +STN+AP +ANPG GQE +WL+LKLIAD G++GLPNAGKSTFLA+VT Sbjct: 121 GNGGFGNAYFTTSTNRAPRHANPGQEGQEMWLWLRLKLIADAGLVGLPNAGKSTFLATVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V+ +EF+LADIPG+I+ AH+G G+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPGLGVVRSDAREFVLADIPGLIEGAHEGVGLGDRFLAHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH+V E+ AY+ + EL AY L K EIV LS+ D +D DTL K++LA Sbjct: 241 LHLVEGTSEHAGKAYKLVRRELEAYGEGLADKPEIVALSKADALDPDTL---KDQLA 294 >gi|154245998|ref|YP_001416956.1| GTP-binding protein Obg/CgtA [Xanthobacter autotrophicus Py2] gi|261277751|sp|A7IH06|OBG_XANP2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|154160083|gb|ABS67299.1| GTP-binding protein Obg/CgtA [Xanthobacter autotrophicus Py2] Length = 344 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 196/331 (59%), Positives = 245/331 (74%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVY+RSGDGGAG +SFRREKFIEFGGPDGG GGRGGDVWI+ LNTLID+R Sbjct: 1 MKFLDQAKVYVRSGDGGAGCVSFRREKFIEFGGPDGGDGGRGGDVWIECVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G+ G NR+GA+G DVVL VP GTQ+ +E +++ DL + GQRI L G Sbjct: 61 YQQHFKAKKGDHGKGANRTGARGSDVVLRVPAGTQILDETEETVLADLTEVGQRIKLLEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNA FK+STNQAP ANPG+ GQE+ IWL+LKLIAD G++GLPNAGKSTFLA+ T Sbjct: 121 GNGGFGNAQFKTSTNQAPRRANPGLEGQERWIWLRLKLIADAGLVGLPNAGKSTFLAATT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V+ +EF+LADIPG+I+ AH+G GIGDRFL H ER L Sbjct: 181 AAKPKIADYPFTTLHPGLGVVRVDGREFVLADIPGLIEGAHEGVGIGDRFLGHVERCRAL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E+ AY+ + EL+AY + L +K EIV LS++D + + L ++K L Sbjct: 241 LHLVDGTSEHAGKAYKTVRAELAAYGNGLDEKPEIVALSKVDALSPELLKQQKERLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 + P S+ +G G+ + L L + RG Sbjct: 301 KKTPLLLSAQSGQGVQEALRLLLSVVEEERG 331 >gi|83592576|ref|YP_426328.1| GTPase ObgE [Rhodospirillum rubrum ATCC 11170] gi|123526909|sp|Q2RV04|OBG_RHORT RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|83575490|gb|ABC22041.1| GTP-binding protein [Rhodospirillum rubrum ATCC 11170] Length = 391 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 192/330 (58%), Positives = 247/330 (74%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK++++SGDGG G ++FRREK IEFGGPDGG GGRG DV ++A NLNTLIDFR Sbjct: 1 MKFLDQAKIFVKSGDGGNGCVAFRREKNIEFGGPDGGHGGRGADVIVEAVPNLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA G G NR+G GE ++ VPVGTQ+FE+D +LI DL + GQR+ LA G Sbjct: 61 YQQHFKAARGRDGSGDNRTGKSGEATIIKVPVGTQIFEDDRKTLIADLSRPGQRVRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGNAH+KSSTNQAP A+PG GQE +WL+LKLIAD G+IGLPNAGKST LA+VT Sbjct: 121 GDGGFGNAHYKSSTNQAPRRADPGWPGQEIWVWLRLKLIADAGLIGLPNAGKSTLLAAVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIADYPFTTL+PNLG+V + +EFI+ADIPG+I+ AH+GAG+G RFL H ER VL Sbjct: 181 RARPKIADYPFTTLHPNLGVVHQDAREFIIADIPGLIEGAHEGAGLGTRFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ A +++V A++ + EL + L +K EIVGLS+ID + + +A K EL+ C Sbjct: 241 LHMIDATQDDVAGAWRTVRAELKGHGQGLDEKSEIVGLSKIDALPPEDIAAKIAELSEAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G FS+I+G G+ +L + + R Sbjct: 301 GAPVMAFSAISGKGLADVLRVMATHVDEAR 330 >gi|182677411|ref|YP_001831557.1| GTP-binding protein Obg/CgtA [Beijerinckia indica subsp. indica ATCC 9039] gi|261266675|sp|B2IE44|OBG_BEII9 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|182633294|gb|ACB94068.1| GTP-binding protein Obg/CgtA [Beijerinckia indica subsp. indica ATCC 9039] Length = 348 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 196/322 (60%), Positives = 245/322 (76%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+A++YIRSGDGGAG +SFR EKFIEFGGPDGG GGRGGDV LNTLID+R Sbjct: 1 MKFLDQARIYIRSGDGGAGCLSFRHEKFIEFGGPDGGDGGRGGDVVALCVEGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM +NR+GA+G D +L VP GTQ+F+EDG +LI DL + GQ + LA G Sbjct: 61 YQQHFKAKTGTHGMGKNRAGARGADCILKVPAGTQIFDEDGETLIADLTEIGQSVCLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFK+STNQAP ANPG G+E +WL+LKLIAD G++GLPNAGKSTFL++V+ Sbjct: 121 GNGGFGNAHFKTSTNQAPRRANPGQEGEEMTLWLRLKLIADAGLVGLPNAGKSTFLSTVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+P LG+V G +EF+LADIPG+I+ AH+G G+GDRFL H ER VL Sbjct: 181 AARPKIADYPFTTLHPQLGVVAYGDREFVLADIPGLIEGAHEGVGLGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V A E+ AY+ I EL+AY + L +K EIV LS+IDTVD++TL + L Sbjct: 241 LHLVDAGCEHAGKAYKTIRKELAAYGNGLDEKPEIVALSKIDTVDAETLKNQMARLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 + P + S+ T + + L+ L Sbjct: 301 KRTPLKLSAATHTNLTETLQSL 322 >gi|118589430|ref|ZP_01546836.1| Hemolysin-type calcium-binding region protein [Stappia aggregata IAM 12614] gi|118438130|gb|EAV44765.1| Hemolysin-type calcium-binding region protein [Stappia aggregata IAM 12614] Length = 348 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 199/323 (61%), Positives = 247/323 (76%), Gaps = 1/323 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVY+RSG+GGAG +SFRREK+IE+GGPDGG GG+GGDV I+ LNTLID+R Sbjct: 1 MKFLDQAKVYVRSGNGGAGCVSFRREKYIEYGGPDGGDGGKGGDVIIECVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHFKA+ G GM RNR+GA G DVVL VPVGTQVFEED +LI DL + GQ+++L G Sbjct: 61 YKQHFKAETGIHGMGRNRTGAHGGDVVLKVPVGTQVFEEDNETLIADLTEIGQKVLLLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSS NQAP ANPG+ G+EK IWL+LKLIAD G++GLPNAGKSTFLA+V+ Sbjct: 121 GNGGFGNAHFKSSVNQAPRRANPGLEGEEKWIWLRLKLIADAGLVGLPNAGKSTFLATVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTT++PNLGIV+ + F +ADIPG+I+ AH+G G+GDRFL H ERT VL Sbjct: 181 AAKPKIADYPFTTIHPNLGIVQIDGRSFAMADIPGLIEGAHEGTGLGDRFLGHVERTRVL 240 Query: 241 LHIVSAL-EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LH+V +E+ AY+ + EL AY + L +K EIV LS+ D ++ D +A K L Sbjct: 241 LHLVDGSGQEDPGEAYRIVRGELEAYGAGLTEKPEIVALSKCDALNEDLIAEKAASLEEA 300 Query: 300 CGQVPFEFSSITGHGIPQILECL 322 CGQ P SS +G + + L + Sbjct: 301 CGQKPLILSSASGLNVDRALRMI 323 >gi|328545762|ref|YP_004305871.1| GTPase obg [polymorphum gilvum SL003B-26A1] gi|326415502|gb|ADZ72565.1| GTPase obg [Polymorphum gilvum SL003B-26A1] Length = 348 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 201/323 (62%), Positives = 244/323 (75%), Gaps = 1/323 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG GGAG +SFRREKFIEFGGPDGG GGRGGDVW++ LNTLID+R Sbjct: 1 MKFLDQAKIYIRSGTGGAGAVSFRREKFIEFGGPDGGDGGRGGDVWVECVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA G GM RNR+GA GEDVVL VPVGTQV EED +LI D+ + GQR++L G Sbjct: 61 YQQHFKAGTGIHGMGRNRTGAGGEDVVLRVPVGTQVLEEDNETLIADMTEVGQRVLLLRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTNQAP +ANPG+ G+EK IWL+LKLIAD G++GLPNAGKSTFLA+V+ Sbjct: 121 GNGGFGNAHFKSSTNQAPRHANPGLPGEEKWIWLRLKLIADAGLVGLPNAGKSTFLAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+V+ + F+LADIPG+I+ AH+G G+GDRFL H ERT VL Sbjct: 181 AAKPKIADYPFTTLHPNLGVVEIDGRGFVLADIPGLIEGAHEGTGLGDRFLGHIERTRVL 240 Query: 241 LHIVS-ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LH+V + E++ AY+ + EL AY L K EIV LS+ D + + A K L Sbjct: 241 LHLVDGSSEQDPGEAYRIVRHELEAYGGGLTDKPEIVALSKADALSPELRAEKAAALEAA 300 Query: 300 CGQVPFEFSSITGHGIPQILECL 322 CG+ P S+ + + L + Sbjct: 301 CGRKPLVLSAASRENVDTALRMI 323 >gi|75674640|ref|YP_317061.1| GTPase ObgE [Nitrobacter winogradskyi Nb-255] gi|123614167|sp|Q3SVI2|OBG_NITWN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|74419510|gb|ABA03709.1| GTP-binding protein, HSR1-related protein [Nitrobacter winogradskyi Nb-255] Length = 358 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 191/326 (58%), Positives = 246/326 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGG G ++FRREKFIEFGGP GG+GGRGGDV ++ LNTLID+R Sbjct: 1 MKFLDEAKVYIRSGDGGNGCVAFRREKFIEFGGPSGGNGGRGGDVIVEVADGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA G GM +R GA G+ +VL VP+GTQ+ +ED +LI D + G+R++LA G Sbjct: 61 YQQHFKAPKGANGMGSDRHGANGKAIVLKVPLGTQIIDEDRETLIHDFTRVGERLVLAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTN+AP ANPG G+E+ IWL+LKLIAD G++GLPNAGKSTFL+ V+ Sbjct: 121 GNGGFGNAHFKSSTNRAPRRANPGQPGEERWIWLRLKLIADAGLVGLPNAGKSTFLSKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V+ +EF+LADIPG+I+ AH+GAG+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPQLGVVRVQDREFVLADIPGLIEGAHEGAGLGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V A ++ AY+ + E+ AY L +K+EIV L++ID V ++ L ++++ L Sbjct: 241 LHLVDAGCDHAGRAYKIVRGEMEAYAGALAEKVEIVALNKIDAVTAEDLKKQRDRLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 + P S +TG G+ +L L + I Sbjct: 301 KKTPLLVSGVTGEGVQDVLRALVEVI 326 >gi|298293633|ref|YP_003695572.1| GTP-binding protein Obg/CgtA [Starkeya novella DSM 506] gi|296930144|gb|ADH90953.1| GTP-binding protein Obg/CgtA [Starkeya novella DSM 506] Length = 346 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 195/334 (58%), Positives = 247/334 (73%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+Y+R+GDGGAG +SFRREKFIEFGGPDGG GGRGGDVWI+ + LNTLID+R Sbjct: 1 MKFLDQAKIYVRAGDGGAGCLSFRREKFIEFGGPDGGDGGRGGDVWIECVNGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM +NR+GAKG+DVVL VP GT+V +EDG +++ D+ + GQR+ L G Sbjct: 61 YQQHFKAKKGGFGMGKNRAGAKGDDVVLKVPAGTEVLDEDGETVLADMTEIGQRVRLLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHF++STNQAP ANPG +E+ I L+LKLIAD G++GLPNAGKSTFLA+ T Sbjct: 121 GNGGFGNAHFQTSTNQAPRRANPGQEAEERWIILRLKLIADAGLVGLPNAGKSTFLAATT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPK+ADYPFTTL+P LG+VK +EF+LADIPG+I+ AH+G G+GDRFL H ER VL Sbjct: 181 AAKPKVADYPFTTLHPGLGVVKVDGREFVLADIPGLIEGAHEGIGLGDRFLAHIERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E+ Y+ + EL AY L K EIV LS+ID++D +TL + L Sbjct: 241 LHLVDGTSEHAGQTYKTVRAELDAYGQGLEDKPEIVALSKIDSLDPETLKTQLARLQRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + P S+ +G G+ + L L I R + E Sbjct: 301 KKKPLALSAQSGEGVREALRALAAVIDEGRADEE 334 >gi|197103720|ref|YP_002129097.1| GTP-binding protein [Phenylobacterium zucineum HLK1] gi|261277664|sp|B4RD64|OBG_PHEZH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|196477140|gb|ACG76668.1| GTP-binding protein [Phenylobacterium zucineum HLK1] Length = 346 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 194/320 (60%), Positives = 245/320 (76%), Gaps = 2/320 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+ K+Y+RSG+GGAG +SFRREK+IE+GGPDGG GGRGGDVWI+A LNTLID+R Sbjct: 1 MKFLDQVKIYVRSGNGGAGAVSFRREKYIEYGGPDGGDGGRGGDVWIEAVEGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA G GM RNR GA GEDVVL VPVGT+V +ED +LI D+D+ G+R +LA G Sbjct: 61 YQQHFKAGTGVHGMGRNRHGAAGEDVVLKVPVGTEVLDEDK-NLIVDMDEAGKRYLLAKG 119 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFK NQAP +ANPG+ G+E+ IWL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 120 GNGGFGNTHFKGPVNQAPRHANPGLPGEERAIWLRLKLIADVGLVGLPNAGKSTFLAAAS 179 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V E F+LADIPG+I+ AH+GAGIG RFL H ERT V Sbjct: 180 AAKPKIADYPFTTLAPNLGVVDLSVGERFVLADIPGLIEGAHEGAGIGTRFLGHIERTAV 239 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V +E++ A++ + EL AY ++L K EI+ L++ID +D +T A K+ +LA Sbjct: 240 LIHLVDGTQEDIVGAWRTVRHELEAYGADLADKPEILALNKIDALDEETRAEKQAQLAEA 299 Query: 300 CGQVPFEFSSITGHGIPQIL 319 G S TG + ++L Sbjct: 300 AGMDVRLVSGFTGENVTELL 319 >gi|85713731|ref|ZP_01044721.1| GTP-binding protein [Nitrobacter sp. Nb-311A] gi|85699635|gb|EAQ37502.1| GTP-binding protein [Nitrobacter sp. Nb-311A] Length = 358 Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust. Identities = 193/326 (59%), Positives = 247/326 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGG G ++FRREKFIEFGGP GG+GGRGGDV ++ LNTLID+R Sbjct: 1 MKFLDEAKVYIRSGDGGNGCVAFRREKFIEFGGPSGGNGGRGGDVVVEVADGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA G GM +R GA G+D+VL VP+GTQ+ +ED +LI D + G+R++LA G Sbjct: 61 YQQHFKASKGANGMGSDRHGANGKDIVLKVPLGTQIIDEDRETLIHDFTRVGERLVLAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTN+AP +ANPG G+E+ IWL+LKLIAD G++GLPNAGKSTFL+ V+ Sbjct: 121 GNGGFGNAHFKSSTNRAPRHANPGQPGEERWIWLRLKLIADAGLVGLPNAGKSTFLSKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V +EF+LADIPG+I+ AH+G G+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPQLGVVNVQDREFVLADIPGLIEGAHEGVGLGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V A ++ AY+ + E+ AY L KIEIV L++ID V ++ L ++++ L Sbjct: 241 LHLVDAGCDHAGRAYKVVRGEMEAYADALAGKIEIVALNKIDAVTAEDLRKQRDRLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 + P S +TG G+P++L L + I Sbjct: 301 KKTPLLVSGVTGEGVPEVLRALVEVI 326 >gi|209963783|ref|YP_002296698.1| GTP-binding protein GTP1 [Rhodospirillum centenum SW] gi|261277735|sp|B6IQZ9|OBG_RHOCS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|209957249|gb|ACI97885.1| GTP-binding protein GTP1 [Rhodospirillum centenum SW] Length = 351 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 191/319 (59%), Positives = 244/319 (76%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+ K+Y++SGDGG G ++FRREKFIEFGGPDGG+GGRGGDV I+A LNTLID+R Sbjct: 1 MKFLDQCKIYLKSGDGGPGAVAFRREKFIEFGGPDGGNGGRGGDVIIEAVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM R+RSGAKGED VL VPVGTQV ++D +++ D+ + GQRI+L G Sbjct: 61 YQQHFKAKRGGHGMGRSRSGAKGEDAVLRVPVGTQVLDDDQETVLADMTEVGQRIVLLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN H+KSSTN+AP PG G+E+ +WL+LKLIAD G++GLPNAGKSTFLA+V+ Sbjct: 121 GDGGFGNEHYKSSTNRAPRQFTPGWPGEERWVWLRLKLIADAGLVGLPNAGKSTFLAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIADYPFTTL PNLG+V+ G +EF+LADIPG+I+ AH+G GIG RFL H ERT VL Sbjct: 181 RARPKIADYPFTTLTPNLGVVQAGEEEFVLADIPGLIEGAHEGRGIGTRFLGHVERTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V +E+VQ AY+ I EL Y L +K EIV L++ID + + L K+ +L Sbjct: 241 LHLVDGTQEDVQLAYRTIRRELRLYGGGLAEKPEIVALNKIDALTPEELEFKRTKLRRSA 300 Query: 301 GQVPFEFSSITGHGIPQIL 319 + S TG G+ ++L Sbjct: 301 KKPVMLLSGATGQGVQEML 319 >gi|23016096|ref|ZP_00055856.1| COG0536: Predicted GTPase [Magnetospirillum magnetotacticum MS-1] Length = 411 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 194/333 (58%), Positives = 250/333 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK++++SGDGGAG SFRREK IEFGGPDGG GGRGGDV ++ +NLNTLID+R Sbjct: 1 MKFLDQAKIFVKSGDGGAGCCSFRREKHIEFGGPDGGDGGRGGDVILECVANLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G G RN++G KG+DVVL VPVGTQV +ED +++ DL GQ ++L G Sbjct: 61 YQQHFKAKIGNHGQGRNKTGGKGDDVVLKVPVGTQVLDEDKETVLADLTAAGQTMVLMRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN H+KSSTNQAP A+ G G+E+ IWL+LK+IAD G++GLPNAGKSTFLA+VT Sbjct: 121 GDGGFGNMHYKSSTNQAPRRADEGWPGEERWIWLRLKMIADAGLVGLPNAGKSTFLAAVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIADYPFTTL+PNLG+V G +EF++ADIPG+I+ AH+GAGIGDRFL H ER VL Sbjct: 181 RARPKIADYPFTTLHPNLGVVTLGEEEFVIADIPGLIEGAHEGAGIGDRFLGHIERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ E++V AY+ + EL+AY L +K E+V L++ D++ +D + K EL C Sbjct: 241 LHLIDGTEDDVAEAYRVVRHELAAYGGGLDEKPEVVALNKCDSLTADDIELKLMELTEAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 GQ S ++G G+ IL L I R E Sbjct: 301 GQEVLPLSGVSGVGLKPILARLFVHIKEAREEE 333 >gi|254501576|ref|ZP_05113727.1| GTP-binding protein Obg/CgtA [Labrenzia alexandrii DFL-11] gi|222437647|gb|EEE44326.1| GTP-binding protein Obg/CgtA [Labrenzia alexandrii DFL-11] Length = 348 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 195/323 (60%), Positives = 242/323 (74%), Gaps = 1/323 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+Y+RSG+GGAG +SFRREK+IE+GGPDGG GG+GGDV ++ LNTLID+R Sbjct: 1 MKFLDQAKIYVRSGNGGAGCVSFRREKYIEYGGPDGGDGGKGGDVIVECVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM +NR+GA G DV L VPVGTQ+ EED ++I DL + GQ++ L G Sbjct: 61 YQQHFKAETGIHGMGKNRTGAHGGDVTLRVPVGTQILEEDNETIIADLTEVGQKVHLLRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTNQAP ANPG+ G+EK IWL+LKLIAD G++GLPNAGKSTFLA+V+ Sbjct: 121 GNGGFGNAHFKSSTNQAPRRANPGLEGEEKWIWLRLKLIADAGLVGLPNAGKSTFLATVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLGIV+ F +ADIPG+I+ AH+G G+GDRFL H ERT VL Sbjct: 181 AAKPKIADYPFTTLHPNLGIVQIDGNSFAMADIPGLIEGAHEGTGLGDRFLGHVERTRVL 240 Query: 241 LHIVSAL-EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LH+V EE+ +Y+ + EL AY + L K EIV LS+ D + D +A K L Sbjct: 241 LHLVDGSGEEDPGESYKVVRGELEAYGAGLTDKPEIVALSKCDALTEDMIAEKAANLEAA 300 Query: 300 CGQVPFEFSSITGHGIPQILECL 322 CGQ P SS +G + + L + Sbjct: 301 CGQRPLILSSASGLNVDRALRMI 323 >gi|154251933|ref|YP_001412757.1| GTP-binding protein Obg/CgtA [Parvibaculum lavamentivorans DS-1] gi|261277657|sp|A7HT67|OBG_PARL1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|154155883|gb|ABS63100.1| GTP-binding protein Obg/CgtA [Parvibaculum lavamentivorans DS-1] Length = 348 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 194/330 (58%), Positives = 246/330 (74%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+Y+RSG+GGAG +SFRREKFIEFGGPDGG GGRGGDV ++ LNTLID+R Sbjct: 1 MKFLDQAKIYVRSGNGGAGCVSFRREKFIEFGGPDGGDGGRGGDVIVECVEGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +QQHF+A+ G GM +NR+GA G DVVL VPVGTQ+FEED +LI D+ + GQRI+L G Sbjct: 61 FQQHFRAKTGTHGMGKNRAGANGADVVLKVPVGTQIFEEDEETLIADMTEVGQRIVLLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNA+FKSSTNQAP ANPG+ GQEK I L+LKLIAD G++GLPNAGKSTFLA+V+ Sbjct: 121 GNGGFGNAYFKSSTNQAPRRANPGLEGQEKTIILRLKLIADAGLVGLPNAGKSTFLAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL P LG+V + F+LADIPG+I+ AH+GAG+GDRFL H ER +L Sbjct: 181 AAKPKIADYPFTTLTPGLGVVTIDTRSFVLADIPGLIEGAHEGAGLGDRFLGHLERCSIL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H+V E+V AY I E+ AY + L K EI+ L+++D + + K LA + Sbjct: 241 IHLVDGTAEDVAEAYHIIRGEIEAYGAGLEDKPEILCLNKMDALSEEEREEKLALLAEES 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G S ++G G+ ++L D+I+ R Sbjct: 301 GSEVRLLSGVSGEGVKEVLRLAADEIWKTR 330 >gi|304320639|ref|YP_003854282.1| GTP-binding protein CgtA [Parvularcula bermudensis HTCC2503] gi|303299541|gb|ADM09140.1| GTP-binding protein CgtA [Parvularcula bermudensis HTCC2503] Length = 352 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 191/323 (59%), Positives = 241/323 (74%), Gaps = 1/323 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD K+YI SG GG G +SFRREKFIEFGGPDGG GGRGG V +A NLNTLIDFR Sbjct: 1 MKFLDRTKIYIMSGGGGNGCVSFRREKFIEFGGPDGGDGGRGGHVIAEAVDNLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQH+KA GE G RNR+GA +D+++ VP GT+++EED +LI DL G R++LA G Sbjct: 61 YQQHYKANRGENGAGRNRTGAGADDLIIKVPTGTEIYEEDEETLIADLKNTGDRVLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFK+STNQAP +AN G L +E+ +WL+LKLIADIG++GLPNAGKSTFLA+V+ Sbjct: 121 GNGGFGNTHFKTSTNQAPRHANKGQLPEERTLWLRLKLIADIGLVGLPNAGKSTFLAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL+P LG+V+ G + F LADIPG+I+ AH+GAGIG RFL H ER Sbjct: 181 AAKPKIADYPFTTLHPQLGVVRLGPNRSFTLADIPGLIEGAHEGAGIGHRFLGHVERCAG 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ E ++ AY+ I +ELSAY+++L + EI+ L++ID +D D K+ LA Sbjct: 241 LLHLIDGTEGDIVGAYRTIREELSAYSADLAARPEILALNKIDALDEDVREEKRAALAQV 300 Query: 300 CGQVPFEFSSITGHGIPQILECL 322 G PF S TG G+ +LE + Sbjct: 301 TGTTPFLVSGATGEGLSPLLEAM 323 >gi|323137990|ref|ZP_08073064.1| GTP-binding protein Obg/CgtA [Methylocystis sp. ATCC 49242] gi|322396709|gb|EFX99236.1| GTP-binding protein Obg/CgtA [Methylocystis sp. ATCC 49242] Length = 353 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 199/342 (58%), Positives = 248/342 (72%), Gaps = 9/342 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVY+RSGDGGAG +SFRREKFIEFGGPDGG GGRGGDV + LNTLID+R Sbjct: 1 MKFLDQAKVYVRSGDGGAGCVSFRREKFIEFGGPDGGDGGRGGDVVAECVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM +NR+G +G D VL VPVGTQ+FEED +LI DL + GQR+++ G Sbjct: 61 YQQHFKAKTGMHGMGKNRAGGRGADAVLKVPVGTQIFEEDEETLIADLTEVGQRVVICKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHF +STN+AP ANPG G+E+ I L+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNAHFTTSTNRAPRRANPGQSGEERTIILRLKLIADAGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V+ +EF+LADIPG+I+ AH+G G+GDRFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPGLGVVRRDEREFVLADIPGLIEGAHEGHGLGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA--- 297 LH+V A E+ Y+ + EL+AY + L +K EIV LS+ID VD + L +++ L Sbjct: 241 LHLVDASGEHAGKDYKTVRGELAAYGAGLDEKPEIVALSKIDIVDPEHLKKQRERLKRAI 300 Query: 298 TQCGQVP------FEFSSITGHGIPQILECLHDKIFSIRGEN 333 + G P S+ TG G+ + L + I R + Sbjct: 301 ARAGPPPEARGGVLTVSAATGAGVTEALRAVGAAIDESRAQE 342 >gi|167648667|ref|YP_001686330.1| GTPase ObgE [Caulobacter sp. K31] gi|261266718|sp|B0T310|OBG_CAUSK RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|167351097|gb|ABZ73832.1| GTP-binding protein Obg/CgtA [Caulobacter sp. K31] Length = 354 Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 192/334 (57%), Positives = 241/334 (72%), Gaps = 1/334 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+ K+Y+RSG+GG G +SFRREK+IE+GGPDGG GGRGGDVWI+A LNTLID+R Sbjct: 1 MKFLDQCKIYVRSGNGGGGAVSFRREKYIEYGGPDGGDGGRGGDVWIEAVEGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA G GM R R GA G+DV+L VPVGTQV EED +LI DLD G + LA G Sbjct: 61 YQQHFKAGTGVHGMGRGRHGAAGDDVLLKVPVGTQVLEEDKETLIADLDTAGMTLRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN HFK NQAP YANPG G+E +WL+LKLIAD+G++GLPNAGKSTFLA+ T Sbjct: 121 GNGGWGNLHFKGPVNQAPKYANPGQDGEELWVWLRLKLIADVGLVGLPNAGKSTFLAAAT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V E F+LADIPG+I+ A +GAG+G RFL H ER+ V Sbjct: 181 AARPKIADYPFTTLTPNLGVVDLSTSERFVLADIPGLIEGASEGAGLGTRFLGHVERSAV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V A ++++ A+ I EL AY EL K EI+ L+++D +D +T K EL Sbjct: 241 LIHLVDATQDDIAGAWTTIRGELEAYGDELADKSEILALNKVDALDPETRKAKAAELQAV 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 G P S ++G G+ ++L ++ RGE Sbjct: 301 SGIKPMLVSGVSGEGVTELLRAAFTQVRIRRGET 334 >gi|144900025|emb|CAM76889.1| Small GTP-binding protein domain [Magnetospirillum gryphiswaldense MSR-1] Length = 423 Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 188/333 (56%), Positives = 251/333 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK++I+SGDGGAG +SFRREK +EFGGPDGG GGRGGDV ++ +NLNTLID+R Sbjct: 1 MKFLDQAKIFIKSGDGGAGAVSFRREKHMEFGGPDGGDGGRGGDVIVECVANLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA G+ GM + R+G KG+D+VL VPVGTQ+ +E+ ++ DL + GQR++L G Sbjct: 61 YQQHFKAAKGDHGMGQQRTGGKGDDIVLKVPVGTQILDEERDMVVADLTEVGQRLVLLRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN H+K+STNQAP +PG G+E +WLKLKLIAD G++GLPNAGKSTFLA+V+ Sbjct: 121 GDGGFGNLHYKTSTNQAPRRGDPGWPGKEMWVWLKLKLIADAGLVGLPNAGKSTFLAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIADYPFTTL+PNLG+V G +EFI+ADIPG+I+ AH+GAGIGDRFL H ER VL Sbjct: 181 RARPKIADYPFTTLHPNLGVVYYGQEEFIVADIPGLIEGAHEGAGIGDRFLGHIERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V +++V AY+ + EL AY L K E+V L++ D++ ++ + K L +C Sbjct: 241 LHLVDGTQDDVAEAYRVVRGELEAYGGGLESKPEVVALNKCDSLLAEDIKDKLEALEAEC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 G + S ++G G+ +IL L I + E+ Sbjct: 301 GHKVYPLSGVSGIGLKEILGTLLQHIKDSKAED 333 >gi|83313178|ref|YP_423442.1| GTPase ObgE [Magnetospirillum magneticum AMB-1] gi|123540589|sp|Q2VZU2|OBG_MAGSA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|82948019|dbj|BAE52883.1| Predicted GTPase [Magnetospirillum magneticum AMB-1] Length = 412 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 190/330 (57%), Positives = 250/330 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK++++SGDGGAG SFRREK IEFGGPDGG GGRGGDV ++ +NLNTLID+R Sbjct: 1 MKFLDQAKIFVKSGDGGAGCCSFRREKHIEFGGPDGGDGGRGGDVILECVANLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G G RN++G KG+DV+L VPVGTQV +E+ +++ DL GQ ++L G Sbjct: 61 YQQHFKAKIGNHGQGRNKTGGKGDDVILKVPVGTQVLDEEKETVLADLTSAGQTMVLLRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN H+KSSTNQAP A+ G G+E+ IWL+LK+IAD G++GLPNAGKSTFLA+VT Sbjct: 121 GDGGFGNMHYKSSTNQAPRRADEGWPGEERWIWLRLKMIADAGLVGLPNAGKSTFLAAVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIADYPFTTL+PNLG+V G +EF++ADIPG+I+ AH+GAGIGDRFL H ER VL Sbjct: 181 RARPKIADYPFTTLHPNLGVVTLGEEEFVIADIPGLIEGAHEGAGIGDRFLGHIERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ +++V AY+ + EL+AY L +K E+V L++ D++ +D + K EL+ C Sbjct: 241 LHLIDGTQDDVAEAYRVVRHELAAYGGGLDEKPEVVALNKCDSLTADDIELKLMELSEAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIR 330 GQ S ++G G+ IL L I R Sbjct: 301 GQEVLPLSGVSGVGLKPILARLFTHIREAR 330 >gi|217979402|ref|YP_002363549.1| GTP-binding protein Obg/CgtA [Methylocella silvestris BL2] gi|261266858|sp|B8EQH4|OBG_METSB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|217504778|gb|ACK52187.1| GTP-binding protein Obg/CgtA [Methylocella silvestris BL2] Length = 346 Score = 365 bits (938), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 193/326 (59%), Positives = 242/326 (74%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AK+YIRSGDGGAG +SFRREKFIEFGGPDGG GGRGGDV ++ LNTLID+R Sbjct: 1 MKFLDSAKIYIRSGDGGAGCLSFRREKFIEFGGPDGGDGGRGGDVVVECVGGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM +NR+G +G D VL VPVGTQ+ +EDG ++I D+ + GQR++LA G Sbjct: 61 YQQHFKAKTGVHGMGKNRAGGRGADAVLKVPVGTQILDEDGETMIADMTEAGQRLVLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKS+TNQAP NPG G E+ + L+LKLIAD G++GLPNAGKSTFLA+V+ Sbjct: 121 GNGGFGNAHFKSATNQAPRRVNPGQEGVERTVLLRLKLIADAGLVGLPNAGKSTFLATVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL P LG+V +EF+LADIPG+I+ AH+G G+GDRFL H ER VL Sbjct: 181 AARPKIADYPFTTLNPQLGVVGCDGREFVLADIPGLIEGAHEGIGLGDRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V A E+ AY+ + EL AY L K EIV LS++D+VD DTL ++ L Sbjct: 241 LHLVGADTEHAGKAYKTVRRELEAYGGGLADKPEIVALSKVDSVDPDTLKQQAMRLKRAA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 + P + S+ T + + L + +I Sbjct: 301 KRAPLQLSAATNLNVQKALRAVLAEI 326 >gi|119386763|ref|YP_917818.1| GTPase ObgE [Paracoccus denitrificans PD1222] gi|261277656|sp|A1B9C8|OBG_PARDP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|119377358|gb|ABL72122.1| small GTP-binding protein [Paracoccus denitrificans PD1222] Length = 343 Score = 365 bits (936), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 190/334 (56%), Positives = 245/334 (73%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVY+RSG GGAG +SFRREKFIE+GGPDGG GGRGGDVW +A LNTLIDFR Sbjct: 1 MKFLDLAKVYVRSGGGGAGCVSFRREKFIEYGGPDGGDGGRGGDVWAEAAPGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +QQHF A+ G GM R+GA G+D+VL VPVGT++ EED ++I DL + GQR++LA G Sbjct: 61 FQQHFFAKSGGHGMGAQRTGASGDDIVLRVPVGTEILEEDQETVIADLTEPGQRVLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKSSTN+AP +ANPG G E+ +WL+LKLIAD G++GLPNAGKSTFLA+V+ Sbjct: 121 GNGGFGNLHFKSSTNRAPRHANPGQPGVERTLWLRLKLIADAGLVGLPNAGKSTFLAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I+ A +G G+GD+FL H ER+ VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDGHEFVMADIPGLIEGASEGRGLGDQFLGHVERSRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E+V + IL EL AY+ L +K + L++ID +D +TLA ++ L + Sbjct: 241 LHLVDGTAEDVALDARTILTELEAYSPALAEKPRVTALNKIDALDPETLAERRAALEAEI 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 G S ++ G+ ++L L +I R E Sbjct: 301 GGPVLLMSGVSREGVTEVLRALWSRIAPSRKPAE 334 >gi|254470934|ref|ZP_05084337.1| GTP-binding protein Obg/CgtA [Pseudovibrio sp. JE062] gi|211960076|gb|EEA95273.1| GTP-binding protein Obg/CgtA [Pseudovibrio sp. JE062] Length = 348 Score = 364 bits (935), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 190/316 (60%), Positives = 241/316 (76%), Gaps = 1/316 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK++++SGDGGAG +SFRREK++ GGPDGG GGRGGDVW++ LNTLID+R Sbjct: 1 MKFLDQAKIFVKSGDGGAGSVSFRREKYVAEGGPDGGDGGRGGDVWVECVEGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QH+KA+ G GM RNR+GAKG+DVVL VPVGTQ+ EED +++ DL ++GQR++L G Sbjct: 61 YAQHYKAKIGMHGMGRNRTGAKGDDVVLRVPVGTQILEEDNETVVADLTEKGQRLLLMRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFK+STNQAP +ANPG G+EK IWL+LKLIAD G++GLPNAGKSTFL++V+ Sbjct: 121 GNGGFGNAHFKTSTNQAPRHANPGQEGEEKWIWLRLKLIADAGLVGLPNAGKSTFLSAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+ + + F+LADIPG+I+ AH+G G+GDRFL H ERT VL Sbjct: 181 AARPKIADYPFTTLHPNLGVCELDGRGFVLADIPGLIRGAHEGHGLGDRFLGHVERTRVL 240 Query: 241 LHIVSAL-EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LH+V EE+ AY+ I EL AY L +K EIV LS+ D + + + L Sbjct: 241 LHLVDGSGEEDPGDAYRTIRGELEAYGHGLDEKPEIVCLSKADALTDELREERFKSLEEA 300 Query: 300 CGQVPFEFSSITGHGI 315 CGQ P SS +G I Sbjct: 301 CGQKPLIISSASGENI 316 >gi|90418428|ref|ZP_01226340.1| GTP-binding protein [Aurantimonas manganoxydans SI85-9A1] gi|90338100|gb|EAS51751.1| GTP-binding protein [Aurantimonas manganoxydans SI85-9A1] Length = 359 Score = 362 bits (930), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 199/326 (61%), Positives = 246/326 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVY+RSGDGGAG +SFRREK+IEFGGPDGG GGRGGDVW++A + LNTLID+R Sbjct: 1 MKFLDQAKVYVRSGDGGAGSVSFRREKYIEFGGPDGGDGGRGGDVWVEAVAGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RNR+G KG D+ L VP GTQ+F ED +L+ DL G+R +A G Sbjct: 61 YQQHFKAKTGGHGMGRNRNGGKGSDITLKVPAGTQIFAEDNETLLFDLTDIGERHCIAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNA+FK+S NQAP ANPG G+E IWL+LKLIAD+G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNAYFKTSVNQAPRRANPGQEGEELTIWLRLKLIADVGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIADYPFTTL+P LG+ K EF++ADIPG+I+ AH+G GIGDRFL H ERT VL Sbjct: 181 RARPKIADYPFTTLHPGLGVAKVDEAEFVIADIPGLIEGAHEGVGIGDRFLGHVERTSVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VS+ E++V AY+ + EL AY L K EIV LS++DT+ + K EL Sbjct: 241 LHLVSSSEDDVAGAYRTVRRELEAYEHGLADKTEIVALSKVDTLTPEAREEKLAELQEAV 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G P S+++ G+ + L L +I Sbjct: 301 GYAPLALSAVSREGMTEALRELKSRI 326 >gi|288959169|ref|YP_003449510.1| GTP-binding protein [Azospirillum sp. B510] gi|288911477|dbj|BAI72966.1| GTP-binding protein [Azospirillum sp. B510] Length = 434 Score = 362 bits (929), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 186/322 (57%), Positives = 242/322 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKV+++SGDGG G ++FRREKFIEFGGPDGG GGRGGDV I+A LNTLID+R Sbjct: 1 MKFLDQAKVFLKSGDGGPGAVAFRREKFIEFGGPDGGDGGRGGDVIIEAADGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHFKAQ G GM NR+GA+GEDVVL VPVGTQ+ +E +++CDL + GQR + G Sbjct: 61 YKQHFKAQRGHHGMGSNRNGARGEDVVLRVPVGTQILDETQETVLCDLTEAGQRRVFLRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNAHFK+ TN+AP +PG GQE+ +WL+LKLIAD G++GLPNAGKSTFLA+ T Sbjct: 121 GDGGHGNAHFKTPTNRAPRKFHPGWPGQEQWVWLRLKLIADAGLLGLPNAGKSTFLAATT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+V+ G +EF++ADIPG+I+ AH+G G+GDRFL H ER+ +L Sbjct: 181 AAKPKIADYPFTTLAPNLGVVRAGDEEFVIADIPGLIEGAHEGHGLGDRFLGHVERSRIL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ ++V A+Y+ I +EL AY L K+E++GL++ D + + + KK L Sbjct: 241 LHLIDGTADDVVASYRTIRNELEAYGGNLADKLEVIGLNKADALLDEEIEEKKAALEEAS 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 G S TG G+ Q+L L Sbjct: 301 GAEVMVLSGATGQGVKQVLYRL 322 >gi|254464609|ref|ZP_05078020.1| GTP-binding protein Obg/CgtA [Rhodobacterales bacterium Y4I] gi|206685517|gb|EDZ45999.1| GTP-binding protein Obg/CgtA [Rhodobacterales bacterium Y4I] Length = 344 Score = 362 bits (929), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 187/326 (57%), Positives = 236/326 (72%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG G +SFRREK+IEFGGPDGG GG+GG VW + T LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGAGGNGCVSFRREKYIEFGGPDGGDGGKGGSVWAEVTEGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G+ GM R R+G G+D+VL VPVGT++ +ED +++ DL + GQR++LA G Sbjct: 61 YQQHFFAKNGQSGMGRQRTGKDGDDIVLRVPVGTEILDEDQETVLADLTEPGQRVLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKSSTNQAP ANPG G ++ IWL+LKLIAD G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGFGNLHFKSSTNQAPRRANPGQEGVDRTIWLRLKLIADAGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I+ AH+G GIGDRFL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGIDNTEFVVADIPGLIEGAHEGRGIGDRFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E V YQ I+ EL AY EL K I L+++D +D + K+ L Sbjct: 241 LHLVDGTSETVVEDYQTIIGELEAYGGELATKPRITALNKVDALDPEEREEKRAALEAAV 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G S ++ G+ ++L + +I Sbjct: 301 GGPVMMMSGVSREGLNEVLRAVRAEI 326 >gi|16124570|ref|NP_419134.1| GTPase ObgE [Caulobacter crescentus CB15] gi|221233256|ref|YP_002515692.1| GTPase ObgE [Caulobacter crescentus NA1000] gi|261266716|sp|B8GYI7|OBG_CAUCN RecName: Full=GTPase Obg/CgtA; AltName: Full=CgtAC; AltName: Full=GTP-binding protein Obg gi|261266717|sp|P0CB41|OBG_CAUCR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|2555098|gb|AAB81507.1| GTP-binding protein [Caulobacter crescentus CB15] gi|13421460|gb|AAK22302.1| GTP-binding protein CgtA [Caulobacter crescentus CB15] gi|220962428|gb|ACL93784.1| GTP-binding protein CgtA [Caulobacter crescentus NA1000] Length = 354 Score = 361 bits (927), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 198/332 (59%), Positives = 246/332 (74%), Gaps = 1/332 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+ K+YIRSG+GG G +SFRREK+IE+GGPDGG GGRGGDVWI+A LNTLID+R Sbjct: 1 MKFLDQCKIYIRSGNGGGGSVSFRREKYIEYGGPDGGDGGRGGDVWIEAVEGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA G GM R R GA GEDVVL VPVGT+V EED +LI DLD G R++LA G Sbjct: 61 YQQHFKAGTGVHGMGRARHGAAGEDVVLKVPVGTEVLEEDKETLIADLDHAGMRLLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN HFK NQAP YANPG G+E+ IWL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNLHFKGPVNQAPKYANPGQEGEERWIWLRLKLIADVGLVGLPNAGKSTFLAAAS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V E F+LADIPG+I+ A +GAG+G RFL H ER+ Sbjct: 181 AAKPKIADYPFTTLTPNLGVVDLSSSERFVLADIPGLIEGASEGAGLGTRFLGHVERSAT 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H++ A +++V AY+ I EL AY EL K EI+ L++ID +D +TLA K EL Sbjct: 241 LIHLIDATQDDVAGAYETIRGELEAYGDELADKAEILALNKIDALDEETLAEKVAELEAV 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 G P S ++G G+ ++L + ++ RG Sbjct: 301 SGIKPRLVSGVSGQGVTELLRAAYKQVRIRRG 332 >gi|295691186|ref|YP_003594879.1| GTP-binding protein Obg/CgtA [Caulobacter segnis ATCC 21756] gi|295433089|gb|ADG12261.1| GTP-binding protein Obg/CgtA [Caulobacter segnis ATCC 21756] Length = 354 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 198/335 (59%), Positives = 248/335 (74%), Gaps = 1/335 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+ K+YIRSG+GG G +SFRREK+IE+GGPDGG GGRGGDVWI+A LNTLID+R Sbjct: 1 MKFLDQCKIYIRSGNGGGGSVSFRREKYIEYGGPDGGDGGRGGDVWIEAVEGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA G GM R R GA G+DVVL VPVGT+V EED +LI DLD G RI+LA G Sbjct: 61 YQQHFKAGTGVHGMGRARHGAAGDDVVLKVPVGTEVLEEDKETLIADLDHAGMRILLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN HFK NQAP YANPG G+E+ IWL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNLHFKGPVNQAPKYANPGQEGEERWIWLRLKLIADVGLVGLPNAGKSTFLAAAS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V E F+LADIPG+I+ A +GAG+G RFL H ER+ Sbjct: 181 AAKPKIADYPFTTLTPNLGVVDLSSSERFVLADIPGLIEGASEGAGLGTRFLGHVERSAT 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H++ A +++V AY+ I EL AY EL K EI+ L++ID +D +TLA K E+ Sbjct: 241 LIHLIDATQDDVAGAYETIRGELEAYGDELADKAEILALNKIDALDEETLAEKIAEVEAV 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 G P S ++G G+ ++L + ++ RG+ E Sbjct: 301 AGVKPRLVSGVSGQGVKELLRAAYRQVRIRRGDLE 335 >gi|84501041|ref|ZP_00999276.1| GTP-binding protein, GTP1/OBG family protein [Oceanicola batsensis HTCC2597] gi|84391108|gb|EAQ03526.1| GTP-binding protein, GTP1/OBG family protein [Oceanicola batsensis HTCC2597] Length = 346 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 189/330 (57%), Positives = 241/330 (73%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG G +SFRREK+IEFGGPDGG+GGRGGDV ++A LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGSGGNGCVSFRREKYIEFGGPDGGNGGRGGDVIVEAVEGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF AQ+G+ G R ++GA G+D+VL VPVGT++ EEDG +LI D+ + GQR++LA G Sbjct: 61 YQQHFFAQNGKGGTGRLKTGADGDDIVLRVPVGTEILEEDGETLIADMTELGQRVVLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFK+STNQAP ANPG+ G E+ IWL+LKLIAD G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGFGNAHFKTSTNQAPRRANPGLEGVERTIWLRLKLIADAGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I+ A +G G+GD FL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDGAEFVVADIPGLIEGASEGRGLGDLFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ +V Y+ I+DEL AY L K + L+++D++D D +K L Sbjct: 241 LHLIDGTSNDVAEDYRTIIDELEAYGGALADKPRVTVLNKVDSLDEDLREMQKEFLEEAV 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G S +G G+ ++L L +I R Sbjct: 301 GGPVMMMSGSSGEGVTEVLRALRAEISEDR 330 >gi|315497442|ref|YP_004086246.1| gtp-binding protein obg/cgta [Asticcacaulis excentricus CB 48] gi|315415454|gb|ADU12095.1| GTP-binding protein Obg/CgtA [Asticcacaulis excentricus CB 48] Length = 350 Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 186/328 (56%), Positives = 240/328 (73%), Gaps = 1/328 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+ K++IRSG+GGAG +SFRREKFI GGPDGG GG+GG VW++A LNTLID+R Sbjct: 1 MKFLDQCKIFIRSGNGGAGSVSFRREKFIPNGGPDGGDGGKGGSVWVEAVEGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA G GM R GA ED+VL VPVGTQVFEED +LI DLD GQ+++L G Sbjct: 61 YQQHFKASTGTHGMGRQMHGANAEDLVLRVPVGTQVFEEDHETLIVDLDTPGQKVMLLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN FK NQAP +A PG G+EK IWL+LKLIAD G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNTRFKGPVNQAPDFALPGQDGEEKWIWLRLKLIADAGLLGLPNAGKSTFLAASS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG++ G ++ F++ADIPG+I+ A +GAG+G RFL H ERT V Sbjct: 181 AARPKIADYPFTTLTPNLGVIDLGAEQRFVIADIPGLIEGASEGAGLGTRFLGHVERTKV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V +E+ AY+ I +EL+AY +L K+ EIV ++++D++D + +L Sbjct: 241 LIHLVDGTQEDPVKAYKVIRNELAAYAEDLAKRPEIVAINKVDSLDPEARKDLSKKLKKA 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIF 327 GQ P+ S +TG G+ +L H KI Sbjct: 301 SGQTPYLISGVTGEGVRDLLFAAHAKII 328 >gi|114706786|ref|ZP_01439686.1| GTP-binding protein [Fulvimarina pelagi HTCC2506] gi|114537734|gb|EAU40858.1| GTP-binding protein [Fulvimarina pelagi HTCC2506] Length = 351 Score = 359 bits (921), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 199/330 (60%), Positives = 246/330 (74%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVY+RSGDGGAG +SFRRE +EFGGPDGG GGRGGDVW++A LNTLID+R Sbjct: 1 MKFLDQAKVYVRSGDGGAGSVSFRREAHVEFGGPDGGDGGRGGDVWVEAVEGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RNR G GED+ L VP GTQVF ED +LICDL + G++ +A G Sbjct: 61 YQQHFKAETGVHGMGRNRHGRNGEDITLKVPAGTQVFAEDNETLICDLQKVGEKKKIAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN FKSS NQAP +ANPG GQ+ IWL+LKLIAD G++GLPNAGKSTFL++VT Sbjct: 121 GNGGFGNDRFKSSVNQAPRHANPGQPGQDLTIWLRLKLIADAGLVGLPNAGKSTFLSTVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIADYPFTTL+P LG+ K EF++ADIPG+I+ AH+G GIGDRFL H ERT VL Sbjct: 181 RARPKIADYPFTTLHPGLGVAKINASEFVIADIPGLIEGAHRGVGIGDRFLGHVERTSVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+VS EE+V AY+ + EL AY L K EI+ LSQ+DT+D++ A K L Sbjct: 241 LHLVSGNEEDVAHAYRTVRGELEAYGHGLTDKPEILCLSQVDTLDAEARAEKLAALKEAS 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G+ + S+++ G+ + L L +I + R Sbjct: 301 GKTALQLSAVSREGLTEALRRLASEIAAGR 330 >gi|126737747|ref|ZP_01753477.1| GTP-binding protein, GTP1/OBG family [Roseobacter sp. SK209-2-6] gi|126721140|gb|EBA17844.1| GTP-binding protein, GTP1/OBG family [Roseobacter sp. SK209-2-6] Length = 344 Score = 358 bits (918), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 178/326 (54%), Positives = 237/326 (72%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVY+RSG GG G +SFRREK+IE+GGPDGG GG+GG VW + LNTLIDFR Sbjct: 1 MKFLDLAKVYVRSGGGGNGCVSFRREKYIEYGGPDGGDGGKGGSVWAETVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G+ GM R R+G G+D++L VPVGT++ +ED +++ D+ + GQR++LA G Sbjct: 61 YQQHFFAKNGQSGMGRQRTGKDGDDIILRVPVGTEILDEDEETVLADMTELGQRVLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKSSTNQAP ANPG G ++ IWL+LKLIAD G++GLPNAGKSTFL++ + Sbjct: 121 GNGGFGNLHFKSSTNQAPRRANPGQEGVDRTIWLRLKLIADAGLLGLPNAGKSTFLSATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I AH+G GIGDRFL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDNAEFVMADIPGLIAGAHEGKGIGDRFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V ++V Y+ I+DEL AY EL K + L+++D +D + + L + Sbjct: 241 LHLVDGTSDDVARDYRTIIDELEAYGGELATKPRVTALNKVDALDDEEREEARKALEEEA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G F S ++ G+ ++L + ++ Sbjct: 301 GGPVFMMSGVSREGLNEVLRAVRAQV 326 >gi|114571329|ref|YP_758009.1| small GTP-binding protein [Maricaulis maris MCS10] gi|122315079|sp|Q0AKX2|OBG_MARMM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|114341791|gb|ABI67071.1| small GTP-binding protein [Maricaulis maris MCS10] Length = 351 Score = 358 bits (918), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 184/331 (55%), Positives = 243/331 (73%), Gaps = 1/331 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVY+RSG+GG G +SFRRE ++E+GGPDGG GG+GGDVW++A LNTLID+R Sbjct: 1 MKFLDQAKVYVRSGNGGGGCVSFRREAYVEYGGPDGGDGGKGGDVWVEAVEGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHFKA G GM RNR+G+ GEDVVL VP GTQ+ +ED ++ DL + GQR++LA G Sbjct: 61 YKQHFKADTGMHGMGRNRTGSGGEDVVLQVPAGTQLLDEDKEEILADLTEIGQRVLLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN+HFK+STNQAP PG G+E+ IWL+LKLIAD+G++GLPNAGKSTFL+ V+ Sbjct: 121 GDGGKGNSHFKTSTNQAPRKTIPGWPGEERWIWLRLKLIADVGLVGLPNAGKSTFLSVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +A PKIA YPFTTLYPNLG+V G FI+ADIPG+I+ AH+GAGIGDRFL H ER Sbjct: 181 KANPKIAAYPFTTLYPNLGVVDLGPGSRFIVADIPGLIEGAHEGAGIGDRFLGHIERCAS 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H++ +++V AAY+ + EL AY L +K EI+ L++ID +D +A K+ EL Sbjct: 241 LIHLIDGTQDDVVAAYKTVRGELEAYGDGLPEKQEILALNKIDAMDEAMVAEKRAELEAA 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G+ S ++G G+ + D + R Sbjct: 301 SGKTVMTLSGVSGDGVKALCGSAWDIVLQNR 331 >gi|159044015|ref|YP_001532809.1| GTPase ObgE [Dinoroseobacter shibae DFL 12] gi|261266767|sp|A8LK09|OBG_DINSH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|157911775|gb|ABV93208.1| GTP-binding protein Obg/CgtA [Dinoroseobacter shibae DFL 12] Length = 345 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 192/334 (57%), Positives = 237/334 (70%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG G ISFRREK+IE+GGPDGG GGRGGDVW++A LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGGGGTGAISFRREKYIEYGGPDGGDGGRGGDVWVEAVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A+ G+ GM + R+G G V L VPVGT++ EED ++I D+ + GQR++LA G Sbjct: 61 YQQHFFAKSGQHGMGKQRTGKDGAGVTLRVPVGTEILEEDEETVIADMTEIGQRVLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKS+TNQAP ANPG G E+ IWL+LKLIAD G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGFGNLHFKSATNQAPRRANPGQPGVERTIWLRLKLIADAGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I+ AH+G GIGDRFL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDGTEFVMADIPGLIEGAHEGRGIGDRFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E+V A Y+ IL EL AY L K + L++ID +D A K L Sbjct: 241 LHLVDGTAEDVVADYRTILTELQAYGGALATKPRVTALNKIDALDEQERAEKAAALQAAS 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 G + S ++G G+ +L + +I R E Sbjct: 301 GFPVLQLSGVSGEGVQDVLRAVRRRIDGARQAEE 334 >gi|86138879|ref|ZP_01057451.1| GTP-binding protein, GTP1/OBG family protein [Roseobacter sp. MED193] gi|85824526|gb|EAQ44729.1| GTP-binding protein, GTP1/OBG family protein [Roseobacter sp. MED193] Length = 344 Score = 355 bits (912), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 187/326 (57%), Positives = 237/326 (72%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVY+RSG GG G +SFRREK+IE+GGPDGG GG+GG VW +A LNTLIDFR Sbjct: 1 MKFLDLAKVYVRSGGGGNGCVSFRREKYIEYGGPDGGDGGKGGSVWAEAVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF AQ+G+ GM R R+G GE+++L VPVGT++ +ED +++ D+ + GQR+ LA G Sbjct: 61 YQQHFFAQNGQSGMGRQRTGKDGEEIILRVPVGTEILDEDQETVLADMTEIGQRVQLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKSSTNQAP ANPG G E+ IWL+LKLIAD G++GLPNAGKSTFLAS + Sbjct: 121 GNGGFGNLHFKSSTNQAPRRANPGQEGVERTIWLRLKLIADSGLLGLPNAGKSTFLASSS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I AH+G GIGDRFL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGIDNTEFVMADIPGLIAGAHEGKGIGDRFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E+V YQ I+DEL AY EL K I L+++D +D + A + L Sbjct: 241 LHLVDGTSEDVAGDYQTIIDELEAYGGELANKPRITALNKVDALDDEERAEARAALEAAA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G+ S ++ G+ ++L + +I Sbjct: 301 GETVLMLSGVSREGLNEVLRAVRAEI 326 >gi|254292542|ref|YP_003058565.1| GTP-binding protein Obg/CgtA [Hirschia baltica ATCC 49814] gi|254041073|gb|ACT57868.1| GTP-binding protein Obg/CgtA [Hirschia baltica ATCC 49814] Length = 355 Score = 355 bits (910), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 182/320 (56%), Positives = 236/320 (73%), Gaps = 1/320 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+ K+YI +G GG G +SFRREK+I GGPDGG GG GG VW +A LNTLID+R Sbjct: 1 MKFLDQCKLYIAAGYGGDGCVSFRREKYIAHGGPDGGDGGLGGSVWAEAVEGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHF+A+ G GM RNR+GA EDV++ VPVGTQ+FEED +LI DL + G +++LA G Sbjct: 61 YKQHFQAERGGHGMGRNRTGAGAEDVIIKVPVGTQIFEEDQETLIADLAKLGDKVLLAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN FK+STNQAP NPG+ G E+ IW++LKLIAD G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNIRFKTSTNQAPRRFNPGLPGDERWIWMRLKLIADAGLVGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V G F+LADIPG+I+ A GAGIG RFL H ER V Sbjct: 181 EAKPKIADYPFTTLTPNLGVVSLGVGSSFVLADIPGLIEGAADGAGIGTRFLGHIERCSV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ A +++ AYQ + +EL Y ++L KIEIV L++ DT+D++ L + +L Sbjct: 241 LLHLIDASQDDPDKAYQTVRNELVEYGADLETKIEIVALNKSDTLDAEILEEQSQKLEKA 300 Query: 300 CGQVPFEFSSITGHGIPQIL 319 CG+ P+ S TG + ++L Sbjct: 301 CGKKPYIISGATGENVKEVL 320 >gi|329888726|ref|ZP_08267324.1| obg family GTPase CgtA [Brevundimonas diminuta ATCC 11568] gi|328847282|gb|EGF96844.1| obg family GTPase CgtA [Brevundimonas diminuta ATCC 11568] Length = 351 Score = 354 bits (909), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 185/333 (55%), Positives = 240/333 (72%), Gaps = 1/333 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG+GGAG +SFRREKFI GGPDGG GG+GGDVW+++ LNTLIDFR Sbjct: 1 MKFLDQAKIYIRSGNGGAGSVSFRREKFIPNGGPDGGDGGKGGDVWVESADGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA G G R GAKGEDVVL VPVGTQV +ED +++ DLD+ G ++ L G Sbjct: 61 YQQHFKAATGNHGQGRQMHGAKGEDVVLRVPVGTQVLDEDKETVLVDLDEPGMKVKLLSG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN FK NQAP +ANPG GQE+ IWL+LKLIADIG+ GLPNAGKSTFL++V+ Sbjct: 121 GNGGWGNTRFKGPVNQAPRHANPGQEGQERWIWLRLKLIADIGLAGLPNAGKSTFLSAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V E F++ADIPG+I+ A +GAG+G RFL H ER+ Sbjct: 181 AARPKVADYPFTTLTPNLGMVDLSPSERFVIADIPGLIEGASEGAGLGTRFLGHVERSAS 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H++ +++V AY+ I EL AY L K+EI+ L++ID + + K EL Sbjct: 241 LIHLIDGTQDDVVEAYRIIRGELEAYGEGLADKVEILALNKIDALTPEAREEKAAELEAV 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G+ P+ S ++G G+ ++L ++ RGE Sbjct: 301 AGRRPYLVSGVSGEGVTELLRAAWAEVKKTRGE 333 >gi|56696859|ref|YP_167221.1| GTPase ObgE [Ruegeria pomeroyi DSS-3] gi|81820031|sp|Q5LRY4|OBG_SILPO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|56678596|gb|AAV95262.1| GTP-binding protein, GTP1/OBG family [Ruegeria pomeroyi DSS-3] Length = 344 Score = 354 bits (909), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 188/330 (56%), Positives = 236/330 (71%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG G +SFRREKFIE+GGPDGG GG+GG VW +A LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGSGGNGCVSFRREKFIEYGGPDGGDGGKGGSVWAEAVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF AQ+G G + RSG GED+VL VPVGT++ +ED +++ DL + GQR++LA G Sbjct: 61 YQQHFFAQNGVPGKGQQRSGKDGEDIVLRVPVGTEILDEDEETVLADLTEVGQRVLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKS+TNQAP ANPG G ++ IWL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGFGNLHFKSATNQAPRRANPGQAGVDRTIWLRLKLIADVGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I AH+G GIGDRFL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDNVEFVIADIPGLIAGAHEGRGIGDRFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V ++ Y I+ EL AY +L K + L++IDT+D + A EL T Sbjct: 241 LHLVDGTSGDLVEDYHTIIGELEAYGGDLAGKPRVTVLNKIDTLDDEERAFLVEELETAS 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G S + G+ ++L L +I + R Sbjct: 301 GGPVMMMSGASREGVTEVLRALRARIDANR 330 >gi|260433678|ref|ZP_05787649.1| Obg family GTPase CgtA [Silicibacter lacuscaerulensis ITI-1157] gi|260417506|gb|EEX10765.1| Obg family GTPase CgtA [Silicibacter lacuscaerulensis ITI-1157] Length = 344 Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 183/326 (56%), Positives = 234/326 (71%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG+G +SFRREK+IE+GGPDGG GG+GG VW + LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGAGGSGCVSFRREKYIEYGGPDGGDGGKGGSVWAEVVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G+ G + R+G G+D++L VPVGT++ +ED ++I DL + GQR++LA G Sbjct: 61 YQQHFFAKNGQPGRGQQRTGKDGDDIILRVPVGTEILDEDQETVIADLTEVGQRVLLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKS+TNQAP ANPG G ++ IWL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGFGNLHFKSATNQAPRRANPGQPGVDRTIWLRLKLIADVGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I+ AH+G GIGDRFL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDNVEFVVADIPGLIEGAHEGRGIGDRFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E + Y I+ EL AY L K I L++ID +D + L K EL Sbjct: 241 LHLVDGTSETIAQDYHTIIHELEAYGGALADKPRITVLNKIDALDEEQLELAKAELEEAV 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G S + G+ ++L L +I Sbjct: 301 GGPVMTMSGVARQGVTEVLRALRAQI 326 >gi|114798904|ref|YP_761254.1| GTPase ObgE [Hyphomonas neptunium ATCC 15444] gi|123128560|sp|Q0BZ39|OBG_HYPNA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|114739078|gb|ABI77203.1| GTP-binding protein, GTP1/OBG family [Hyphomonas neptunium ATCC 15444] Length = 356 Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 187/323 (57%), Positives = 237/323 (73%), Gaps = 1/323 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVYIRSG GGAG +SFRREKF+E+GGPDGG GGRGGDVWI+A LNTLIDFR Sbjct: 1 MKFLDQAKVYIRSGGGGAGCVSFRREKFVEYGGPDGGDGGRGGDVWIEAVEGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA G GM + R+GA+GED VL VPVGTQ++EED ++I DL + GQR++LAPG Sbjct: 61 YQQHFKAARGGHGMGKQRTGARGEDAVLKVPVGTQIYEEDQETMIADLTEVGQRVLLAPG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN FKSS NQAP +NPG G+E+ IWL+LKLIAD G++GLPNAGKSTFL+ T Sbjct: 121 GNGGWGNLRFKSSINQAPRRSNPGEEGEERWIWLRLKLIADAGLVGLPNAGKSTFLSVAT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PKIADYPFTTL+P LG+V G F+LADIPG+I+ A +GAG+G RFL H ER V Sbjct: 181 AANPKIADYPFTTLHPGLGVVDLGTSTRFVLADIPGLIEGAAEGAGLGHRFLGHVERCKV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ +++ AY+ I EL AY+++ + EIV L++ID + + + + +L Sbjct: 241 LLHLIDCTQDDPAGAYRTIRSELEAYDADFADRPEIVALNKIDALTPELVKEQLKQLKKV 300 Query: 300 CGQVPFEFSSITGHGIPQILECL 322 P S +TG G+ L + Sbjct: 301 YKGKPLLISGVTGAGVKDALYAI 323 >gi|307942940|ref|ZP_07658285.1| Obg family GTPase CgtA [Roseibium sp. TrichSKD4] gi|307773736|gb|EFO32952.1| Obg family GTPase CgtA [Roseibium sp. TrichSKD4] Length = 348 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 193/323 (59%), Positives = 238/323 (73%), Gaps = 1/323 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+Y+RSG+GGAG +SFRREK+IE+GGPDGG GGRGGDV ++ LNTLID+R Sbjct: 1 MKFLDQAKIYVRSGNGGAGCVSFRREKYIEYGGPDGGDGGRGGDVIVECVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHFKA+ G GM +NR+GA G VVL VPVGTQ+ EED ++I DL + GQ++ L G Sbjct: 61 YKQHFKAETGVHGMGKNRTGADGGHVVLKVPVGTQILEEDNETVIADLTELGQKVHLLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSS NQAP ANPG+ G+EK IWL+LKLIAD G++GLPNAGKSTFLA+V+ Sbjct: 121 GNGGFGNAHFKSSVNQAPRRANPGLEGEEKWIWLRLKLIADAGLVGLPNAGKSTFLATVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLGIV+ F +ADIPG+I+ AH+G G+GDRFL H ERT VL Sbjct: 181 AAKPKIADYPFTTLHPNLGIVQIDGNSFAMADIPGLIEGAHEGTGLGDRFLGHVERTRVL 240 Query: 241 LHIVS-ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LH+V + EE AY+ + EL AY L K EIV LS+ D + + +A K L Sbjct: 241 LHLVDGSSEEYPGEAYRVVRGELDAYGHGLTDKPEIVALSKCDALTEEVIAEKAAALEAA 300 Query: 300 CGQVPFEFSSITGHGIPQILECL 322 CGQ P SS + + L + Sbjct: 301 CGQKPLILSSASKRNVDTALRMI 323 >gi|254476990|ref|ZP_05090376.1| GTP-binding protein Obg/CgtA [Ruegeria sp. R11] gi|214031233|gb|EEB72068.1| GTP-binding protein Obg/CgtA [Ruegeria sp. R11] Length = 344 Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 185/326 (56%), Positives = 240/326 (73%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG G +SFRREKF+E+GGPDGG GGRGG VW++ T LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGSGGNGCVSFRREKFMEYGGPDGGDGGRGGSVWVEVTEGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G+ GM R R+G G+D+VL VPVGT++ +ED +++ DL + G+R +LA G Sbjct: 61 YQQHFFAKNGQSGMGRQRTGKDGDDIVLRVPVGTEIMDEDQETVLADLTEVGERFLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKS+TNQAP ANPG G ++ IWL+LKLIAD+G++GLPNAGKSTFL++ + Sbjct: 121 GNGGFGNLHFKSATNQAPRRANPGQEGIDRTIWLRLKLIADVGLLGLPNAGKSTFLSATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I AH+G GIGDRFL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGIDGVEFVVADIPGLIAGAHEGRGIGDRFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V + V Y+ I++EL AY EL K I L+++D++D + A K EL Sbjct: 241 LHLVDGTSDTVAEDYETIINELEAYGGELADKPRITALNKVDSLDDEERAAAKAELEAAV 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G F S ++ G+ ++L + +I Sbjct: 301 GGPVFMMSGVSREGLNEVLRAMRTEI 326 >gi|296445013|ref|ZP_06886974.1| GTP-binding protein Obg/CgtA [Methylosinus trichosporium OB3b] gi|296257434|gb|EFH04500.1| GTP-binding protein Obg/CgtA [Methylosinus trichosporium OB3b] Length = 353 Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 190/296 (64%), Positives = 229/296 (77%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+Y+RSGDGGAG +SFRREKFIEFGGPDGG GGRGGDV LNTLID+R Sbjct: 1 MKFLDQAKIYVRSGDGGAGCVSFRREKFIEFGGPDGGDGGRGGDVVAICVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM +NR+GAKG D VL VPVGTQ+FEED +LI DL + GQ ++A G Sbjct: 61 YQQHFKARTGTHGMGKNRAGAKGADAVLKVPVGTQIFEEDEETLIADLTEVGQTAVIARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG G E+ I L+LKLIAD G+IGLPNAGKSTFLASV+ Sbjct: 121 GNGGFGNLHFTTSTNRAPRRANPGQEGIERNIVLRLKLIADAGLIGLPNAGKSTFLASVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTLYP LG+V+ +EF+LADIPG+I+ AH+G G+GDRFL H ER L Sbjct: 181 AARPKIADYPFTTLYPGLGVVRIDDREFVLADIPGLIEGAHEGHGLGDRFLGHVERCRAL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LH+V A E+ Y+ + EL+AY + L +K EIV LS+ID VD + L ++K L Sbjct: 241 LHLVDATGEHAGRDYKTVRLELAAYGAGLDEKTEIVALSKIDAVDPEHLKKQKERL 296 >gi|99081044|ref|YP_613198.1| GTPase ObgE [Ruegeria sp. TM1040] gi|123077669|sp|Q1GHD0|OBG_SILST RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|99037324|gb|ABF63936.1| Small GTP-binding protein domain [Ruegeria sp. TM1040] Length = 348 Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 186/326 (57%), Positives = 236/326 (72%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG G +SFRREKFIE+GGPDGG GG+GG VW +A LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGAGGNGCVSFRREKFIEYGGPDGGDGGKGGSVWAEAVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G+ GM R RSG G+++VL VPVGT++ +ED +++ DL G+R++LA G Sbjct: 61 YQQHFFAKNGQSGMGRQRSGKDGDEIVLRVPVGTEILDEDEETVLADLTHVGERVLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKSSTNQAP AN G G E+ IWL+LKLIAD G++GLPNAGKSTFL+S + Sbjct: 121 GNGGFGNLHFKSSTNQAPRRANSGQEGVERTIWLRLKLIADAGLLGLPNAGKSTFLSSTS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I+ AH+G GIGDRFL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGIDNTEFVMADIPGLIEGAHEGRGIGDRFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E V Y+ I++EL AY EL K + L++ID +D + A + L + Sbjct: 241 LHLVDGTSETVAEDYRTIINELEAYGGELASKPRVTALNKIDALDDEERAEARAALEAEV 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G SS++ G+ +L + +I Sbjct: 301 GAPVLMMSSVSREGLDLVLRAVRAEI 326 >gi|254509844|ref|ZP_05121911.1| GTP-binding protein Obg/CgtA [Rhodobacteraceae bacterium KLH11] gi|221533555|gb|EEE36543.1| GTP-binding protein Obg/CgtA [Rhodobacteraceae bacterium KLH11] Length = 344 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 181/326 (55%), Positives = 235/326 (72%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG G +SFRREK+IE+GGPDGG GG+GG VW + LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGAGGGGCVSFRREKYIEYGGPDGGDGGKGGSVWAEVVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G+ G + R+G G+D++L VPVGT++ +ED ++ICDL + G+R++LA G Sbjct: 61 YQQHFFAKNGQPGRGQQRTGKDGDDIILRVPVGTEILDEDEETVICDLTEVGERVLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKS+TNQAP ANPG G ++ IWL+LKLIAD+G++G+PNAGKSTFLA+ + Sbjct: 121 GNGGFGNLHFKSATNQAPRRANPGQAGIDRTIWLRLKLIADVGLLGMPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I+ AH+G GIGDRFL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDNVEFVVADIPGLIEGAHEGRGIGDRFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E V Y+ I+ EL AY EL K I L+++D +D + + EL Sbjct: 241 LHLVDGASETVAEDYRTIIHELEAYGGELAAKPRITVLNKVDALDDEERELAQAELEEAV 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G S + G+ ++L L +I Sbjct: 301 GGPVMTMSGVARLGVTEVLRALRAQI 326 >gi|83952105|ref|ZP_00960837.1| GTP-binding protein, GTP1/OBG family protein [Roseovarius nubinhibens ISM] gi|83837111|gb|EAP76408.1| GTP-binding protein, GTP1/OBG family protein [Roseovarius nubinhibens ISM] Length = 349 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 185/326 (56%), Positives = 233/326 (71%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG G ISFRREKFIE+GGPDGG GG GG VW +A LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGSGGNGCISFRREKFIEYGGPDGGDGGGGGSVWAEAVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G++GM R+G G+D+VL VP GT++ +ED ++I DL + G R++LA G Sbjct: 61 YQQHFFAKNGQQGMGNQRTGKDGDDIVLRVPAGTELLDEDQETVIADLAEVGDRVLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFK+STNQAP ANPG G E+ IWL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGFGNLHFKTSTNQAPRRANPGQEGVERTIWLRLKLIADVGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I A +G G+GD FL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDGVEFVVADIPGLIDGASEGRGLGDLFLGHVERCSVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V A ENV YQ I+ E+SAY L +K + L++ D + + + EL Sbjct: 241 LHLVDATAENVVEDYQTIVREISAYGHVLAEKPRVTVLNKSDALGPELTQMVREELEEAI 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 GQ S + G G+ ++L L +I Sbjct: 301 GQKVMTMSGVAGEGVTEVLRALRAEI 326 >gi|83944744|ref|ZP_00957110.1| GTP-binding protein [Oceanicaulis alexandrii HTCC2633] gi|83851526|gb|EAP89381.1| GTP-binding protein [Oceanicaulis alexandrii HTCC2633] Length = 355 Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 185/335 (55%), Positives = 240/335 (71%), Gaps = 1/335 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVY++SG GG G +SFRRE ++EFGGPDGG GG GGDVW++A LNTLID+R Sbjct: 1 MKFLDQAKVYVKSGWGGPGCVSFRREAYVEFGGPDGGDGGDGGDVWVEAVEGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G G RNR+G GEDVVL VPVGTQVF+ED +L+ DL + GQ+ +LA G Sbjct: 61 YQQHFKAERGHNGAGRNRTGRGGEDVVLRVPVGTQVFDEDKETLLADLTEVGQKALLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAHFKSS NQAP + PG G+E+ IWL+LKLIAD G++GLPNAGKST L+ + Sbjct: 121 GIGGKGNAHFKSSRNQAPRISQPGEAGEERAIWLRLKLIADAGLVGLPNAGKSTLLSVAS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +A PKIA YPFTTL+PNLG+V+ G F+LADIPG+I+ AH+GAGIGDRFL H ER + Sbjct: 181 KAHPKIAAYPFTTLHPNLGVVEMGTGNRFVLADIPGLIEGAHEGAGIGDRFLGHIERCAL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H++ A E+ AY + EL AY + K EIV L+++D D + + E + Sbjct: 241 LVHLIDATGEDPMGAYDTVRTELEAYGGGITDKREIVVLNKLDAADPEIVEMLDAEFKDR 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 G VP+ S T G+ ++L+ + D + + R E + Sbjct: 301 LGAVPYHLSGATREGLKELLKVIWDAVHARRTEEK 335 >gi|163731843|ref|ZP_02139290.1| GTP-binding domain protein [Roseobacter litoralis Och 149] gi|161395297|gb|EDQ19619.1| GTP-binding domain protein [Roseobacter litoralis Och 149] Length = 344 Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 186/330 (56%), Positives = 232/330 (70%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD KVYIRSG GG G +SFRREK+IE+GGPDGG GG GG VW +A LNTLIDFR Sbjct: 1 MKFLDLCKVYIRSGAGGGGCVSFRREKYIEYGGPDGGDGGGGGSVWAEAVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G+ GM R R+G G+D+VL VPVGT++ +ED +++CDL + GQR+ LA G Sbjct: 61 YQQHFFAKNGQPGMGRQRTGKDGDDIVLRVPVGTEILDEDQETVLCDLTEVGQRVQLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKSSTNQAP +NPG G E+ +WL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGFGNLHFKSSTNQAPRRSNPGQDGVERTLWLRLKLIADVGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I+ A QG G+GD FL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDNAEFVVADIPGLIEGASQGRGLGDLFLGHIERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E + Y I+ EL AY L K I L++ID +D D A EL Sbjct: 241 LHLVDGTSETLVEDYHTIIGELEAYGVGLADKPRITVLNKIDALDEDQRASTMKELEKAS 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G S + G G+ ++L L +I R Sbjct: 301 GGDVMAMSGVAGDGVTEVLRKLRGEISDER 330 >gi|163736424|ref|ZP_02143843.1| Small GTP-binding protein domain [Phaeobacter gallaeciensis BS107] gi|163741041|ref|ZP_02148433.1| GTPase involved in cell partioning and DNA repair [Phaeobacter gallaeciensis 2.10] gi|161385394|gb|EDQ09771.1| GTPase involved in cell partioning and DNA repair [Phaeobacter gallaeciensis 2.10] gi|161390294|gb|EDQ14644.1| Small GTP-binding protein domain [Phaeobacter gallaeciensis BS107] Length = 344 Score = 352 bits (903), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 185/326 (56%), Positives = 238/326 (73%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG G +SFRREKF+E+GGPDGG GGRGG VW++ T LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGAGGNGCVSFRREKFMEYGGPDGGDGGRGGSVWVEVTEGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G+ GM R R+G G+D++L VPVGT++ +ED +++ DL + G+R +LA G Sbjct: 61 YQQHFFAKNGQSGMGRQRTGKDGDDIILRVPVGTEIMDEDQETVLADLTEVGERFLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKS+TNQAP AN G E+ IWL+LKLIAD+G++GLPNAGKSTFL++ + Sbjct: 121 GNGGFGNLHFKSATNQAPRRANSGQDAIERTIWLRLKLIADVGLLGLPNAGKSTFLSATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I AH+G GIGDRFL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGIDGVEFVVADIPGLIAGAHEGRGIGDRFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E V YQ I++EL AY EL +K I L++ID++D + A K L Sbjct: 241 LHLVDGTSETVAEDYQTIINELEAYGGELAEKPRITALNKIDSLDDEERAEAKAALEAAV 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G F S ++ G+ ++L + +I Sbjct: 301 GGPVFMMSGVSREGLNEVLRSMRTQI 326 >gi|259419216|ref|ZP_05743133.1| Obg family GTPase CgtA [Silicibacter sp. TrichCH4B] gi|259345438|gb|EEW57292.1| Obg family GTPase CgtA [Silicibacter sp. TrichCH4B] Length = 348 Score = 351 bits (901), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 185/326 (56%), Positives = 237/326 (72%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG G +SFRREKFIE+GGPDGG GG+GG VW +A LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGAGGNGCVSFRREKFIEYGGPDGGDGGKGGSVWAEAVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G+ GM R RSG G+D++L VPVGT++ +ED +++ DL + G+R++LA G Sbjct: 61 YQQHFFAKNGQSGMGRQRSGKDGDDIILRVPVGTEILDEDEETVLADLTEVGERVLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKSSTNQAP AN G E+ IWL+LKLIAD G++GLPNAGKSTFL+S + Sbjct: 121 GNGGFGNLHFKSSTNQAPRRANSGQECVERTIWLRLKLIADAGLLGLPNAGKSTFLSSTS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I+ AH+G GIGDRFL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGIDNTEFVMADIPGLIEGAHEGRGIGDRFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E V Y+ I++EL AY EL K + L++ID +D + A + L + Sbjct: 241 LHLVDGTSETVAEDYRTIINELEAYGGELANKPRVTALNKIDALDDEERAEARAALEAEV 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G SS++ G+ ++L + +I Sbjct: 301 GAPVRIMSSVSREGLDEVLRAVRAEI 326 >gi|83942422|ref|ZP_00954883.1| GTP-binding protein, GTP1/OBG family protein [Sulfitobacter sp. EE-36] gi|83846515|gb|EAP84391.1| GTP-binding protein, GTP1/OBG family protein [Sulfitobacter sp. EE-36] Length = 345 Score = 350 bits (899), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 180/338 (53%), Positives = 236/338 (69%), Gaps = 4/338 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD KVYIRSG GG G +SFRREK+IE+GGPDGG GG GG VW +A LNTLIDFR Sbjct: 1 MKFLDLCKVYIRSGAGGGGCVSFRREKYIEYGGPDGGDGGSGGSVWAEAVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G+ GM + R+G G+D++L VPVGT++ +ED +++ D+ + GQR+ LA G Sbjct: 61 YQQHFFAKNGQPGMGKQRTGKDGDDIILRVPVGTEILDEDQETVLADMTELGQRVELARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN HFKS+TNQAP ANPG G ++ +WL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNLHFKSATNQAPRRANPGQEGVDRTLWLRLKLIADVGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I+ A +G G+GD FL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDNTEFVVADIPGLIEGASEGRGLGDLFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ + YQ I++EL AY EL K I L++ID +D D + EL C Sbjct: 241 LHLIDGTSNTIAEDYQTIINELEAYGGELADKPRITVLNKIDALDEDDRVTAREELEKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI----FSIRGENE 334 G S + G+ ++L L +I R E+E Sbjct: 301 GAEVMMMSGVAREGVTEVLRALRGQIDDDRLRFRSEDE 338 >gi|254419257|ref|ZP_05032981.1| GTP-binding protein Obg/CgtA [Brevundimonas sp. BAL3] gi|196185434|gb|EDX80410.1| GTP-binding protein Obg/CgtA [Brevundimonas sp. BAL3] Length = 348 Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 186/332 (56%), Positives = 236/332 (71%), Gaps = 1/332 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG+GGAG +SFRREKFI GGPDGG GG+GGD+WI+A LNTLID+R Sbjct: 1 MKFLDQAKIYIRSGNGGAGSVSFRREKFIPNGGPDGGDGGKGGDIWIEAVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKAQ G G R G KG+DV L VPVGTQV +ED +++ D+D G+ +L G Sbjct: 61 YQQHFKAQTGHHGQGRQMHGGKGDDVHLKVPVGTQVLDEDKETVLLDMDTPGKIELLLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN FK TNQAP YANPG GQE+ IWL+LKLIADIG+ GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNVRFKGPTNQAPTYANPGQDGQERWIWLRLKLIADIGLAGLPNAGKSTFLAAAS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V E F++ADIPG+I+ A +GAG+G RFL H ER+ Sbjct: 181 AAKPKIADYPFTTLAPNLGMVDLSPSERFVIADIPGLIEGASEGAGLGTRFLGHVERSAS 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H++ +++V AAY+ I EL AY L +K EI+ L++ID + + K EL Sbjct: 241 LIHLIDGTQDDVAAAYRIIRGELEAYGEGLAEKAEILALNKIDALTPEAREEKAAELEAV 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 G+ P S ++G G+ +L ++ RG Sbjct: 301 AGRRPMLVSGVSGEGVAALLRAAWAEVKKTRG 332 >gi|260574023|ref|ZP_05842028.1| GTP-binding protein Obg/CgtA [Rhodobacter sp. SW2] gi|259023489|gb|EEW26780.1| GTP-binding protein Obg/CgtA [Rhodobacter sp. SW2] Length = 341 Score = 349 bits (895), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 182/330 (55%), Positives = 232/330 (70%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD KVYIRSG GGAG +SFRREKFIEFGGPDGG GG GG VW +A LNTLIDFR Sbjct: 1 MKFLDLTKVYIRSGGGGAGCVSFRREKFIEFGGPDGGDGGNGGSVWAEAVEGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A+ G+ GM R+G GED+ L VP+GT++ +ED ++I D+ GQR++LA G Sbjct: 61 YQQHFFAKSGQGGMGAQRTGKTGEDITLKVPLGTEILDEDEETVIADMTTVGQRVLLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN FKSSTN++P AN G G E+ IWL+LKLIAD G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNLQFKSSTNRSPTRANSGQEGVERTIWLRLKLIADAGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL PNLG+V EF++ADIPG+I+ A +G G+GD+FL H ER VL Sbjct: 181 NARPKIADYPFTTLVPNLGVVGIDGHEFVMADIPGLIEGASEGRGLGDQFLAHVERCSVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V + Y+ I+ EL AY EL K I L++ID +D+ TL+ +K L Sbjct: 241 LHLVDGTSSTIAKDYRTIIHELEAYAEELADKPRITALNKIDALDAKTLSTRKRALEKAT 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G F S ++G G+ +L ++ +I R Sbjct: 301 GGPVFLISGVSGAGLQDVLRAIYAQILQGR 330 >gi|114771045|ref|ZP_01448485.1| GTP-binding protein, GTP1/OBG family [alpha proteobacterium HTCC2255] gi|114548327|gb|EAU51213.1| GTP-binding protein, GTP1/OBG family [alpha proteobacterium HTCC2255] Length = 350 Score = 349 bits (895), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 184/326 (56%), Positives = 234/326 (71%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYI+SG GG G ISFRRE E+GGPDGG+GGRGGDV ++A NLNTLIDFR Sbjct: 1 MKFLDLAKVYIKSGAGGNGCISFRREAHTEYGGPDGGNGGRGGDVVVEAIDNLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF AQ+G GM + RSGA G+D+VL VPVGT++ EED ++I DL + GQR +L+ G Sbjct: 61 YQQHFFAQNGRSGMGKQRSGADGQDIVLKVPVGTEILEEDQETVIVDLTEPGQRFVLSQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKSSTNQAP ANPG E+ IWL+LKLIAD G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGFGNLHFKSSTNQAPRRANPGQPFVERTIWLRLKLIADAGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V KEF++ADIPG+I+ A +G G+G RFL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDNKEFVIADIPGLIEGASEGVGLGVRFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ E V Y+ I+ EL Y +L + + L++ID +D LA K +EL Sbjct: 241 LHLIDGTSETVVDDYKTIIQELEKYGGDLANRPRVTALNKIDAIDETELAIKAHELELHI 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G + S ++ G+ +L + ++ Sbjct: 301 GSPILQLSGVSRAGLTDVLRAVAAEV 326 >gi|126726411|ref|ZP_01742252.1| GTP-binding protein, GTP1/OBG family [Rhodobacterales bacterium HTCC2150] gi|126704274|gb|EBA03366.1| GTP-binding protein, GTP1/OBG family [Rhodobacterales bacterium HTCC2150] Length = 348 Score = 348 bits (892), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 189/326 (57%), Positives = 239/326 (73%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG G +SFRREK+IE+GGPDGG GGRGGDV ++ +LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGGGGGGAVSFRREKYIEYGGPDGGDGGRGGDVIVEGVESLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A+ G GM + R+GA G D+VL VPVGT+V +ED +LICD+ + GQR+I+A G Sbjct: 61 YQQHFFAKSGIPGMGKQRTGADGADIVLKVPVGTEVLDEDEETLICDITEVGQRVIIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKSSTN+AP ANPG G E+ IWL+LKLIAD G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGFGNLHFKSSTNRAPRRANPGQEGIERTIWLRLKLIADAGLLGLPNAGKSTFLAASS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I+ AH+G GIGDRFL H ER +VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGIDNTEFVMADIPGLIEGAHEGRGIGDRFLGHVERCNVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E++ A Y I++EL AY L + I L++ID +D + A + EL Sbjct: 241 LHLVDGTAEDITANYNTIINELEAYGGVLADRPRITALNKIDALDDEERAAAQAELEKAS 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G S+ + GI ++L + +I Sbjct: 301 GGKVLMLSAASQEGIKEVLRAVRLEI 326 >gi|110679886|ref|YP_682893.1| GTPase ObgE [Roseobacter denitrificans OCh 114] gi|123172402|sp|Q165Y6|OBG_ROSDO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|109456002|gb|ABG32207.1| GTP-binding domain protein [Roseobacter denitrificans OCh 114] Length = 344 Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 183/326 (56%), Positives = 230/326 (70%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD KVYIRSG GG G +SFRREK+IE+GGPDGG GG GG VW +A LNTLIDFR Sbjct: 1 MKFLDLCKVYIRSGAGGGGCVSFRREKYIEYGGPDGGDGGTGGSVWAEAVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G+ GM R R+G G+D+VL VPVGT++ +ED ++ICDL + GQR+ LA G Sbjct: 61 YQQHFFAKNGQPGMGRQRTGKDGDDIVLRVPVGTEILDEDQETVICDLTEVGQRVQLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKSSTNQAP +NPG G E+ +WL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGFGNLHFKSSTNQAPRRSNPGQDGVERTLWLRLKLIADVGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I+ A +G G+GD FL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDNTEFVVADIPGLIEGASEGRGLGDLFLGHIERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+ E + Y I+ EL AY L K I L++ID +D + A +L C Sbjct: 241 LHLFDGTSETLIEDYHTIIGELEAYGVGLADKPRITVLNKIDALDEERRAMALKQLNNVC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G S + G G+ +L L +I Sbjct: 301 GGGVMAMSGVAGDGVTDVLRKLRGEI 326 >gi|329847645|ref|ZP_08262673.1| obg family GTPase CgtA [Asticcacaulis biprosthecum C19] gi|328842708|gb|EGF92277.1| obg family GTPase CgtA [Asticcacaulis biprosthecum C19] Length = 354 Score = 347 bits (890), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 179/320 (55%), Positives = 238/320 (74%), Gaps = 1/320 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+ K++IRSG+GGAG +SFRREKFI GGPDGG GG+GGDVWI+A LNTLID+R Sbjct: 1 MKFLDQCKIFIRSGNGGAGSVSFRREKFIPNGGPDGGDGGKGGDVWIEAAEGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ GE G R GA E++VL VPVGT+V +E+G +L+ D+D G+R +LA G Sbjct: 61 YQQHFKAKTGEHGKGRQMHGANAEEIVLRVPVGTEVLDEEGETLVVDMDTAGKRYLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN FK NQAP +A PG G+E+ +WL+LKLIAD G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNTRFKGPVNQAPTFALPGQDGEERWLWLRLKLIADAGLLGLPNAGKSTFLAASS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG++ G ++ F+LADIPG+I+ A +GAG+G RFL H ERT V Sbjct: 181 AAKPKIADYPFTTLTPNLGVIDLGPEQRFVLADIPGLIEGASEGAGLGTRFLGHVERTKV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V +++ AY+ I EL+AY +L + EIV ++++D +D+D + +L Sbjct: 241 LIHLVDGTQDDPVKAYKVIRRELAAYAEDLALRPEIVAINKVDAMDADARKKLAQKLKRA 300 Query: 300 CGQVPFEFSSITGHGIPQIL 319 GQ P S +TG G+ ++L Sbjct: 301 SGQAPHLISGVTGEGVRELL 320 >gi|83953642|ref|ZP_00962363.1| GTP-binding protein, GTP1/OBG family protein [Sulfitobacter sp. NAS-14.1] gi|83841587|gb|EAP80756.1| GTP-binding protein, GTP1/OBG family protein [Sulfitobacter sp. NAS-14.1] Length = 345 Score = 347 bits (890), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 176/326 (53%), Positives = 232/326 (71%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD KVYIRSG GG G +SFRREK+IE+GGPDGG GG GG VW +A LNTLIDFR Sbjct: 1 MKFLDLCKVYIRSGAGGGGCVSFRREKYIEYGGPDGGDGGSGGSVWAEAVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G+ GM + R+G G+D++L VPVGT++ +ED +++ D+ + GQR+ LA G Sbjct: 61 YQQHFFAKNGQPGMGKQRTGKDGDDIILRVPVGTEILDEDQETVLADMTELGQRVELARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN HFKS+TNQAP ANPG G ++ +WL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNLHFKSATNQAPRRANPGQEGVDRTLWLRLKLIADVGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I+ A +G G+GD FL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDNTEFVVADIPGLIEGASEGRGLGDLFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ + YQ I++EL AY EL K I L++ID +D + + EL C Sbjct: 241 LHLIDGTSNTIAEDYQTIINELEAYGGELADKPRITVLNKIDALDEEDRITAREELEKAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G S + G+ ++L L +I Sbjct: 301 GAEVMLMSGVAREGVTEVLRALRGQI 326 >gi|209545303|ref|YP_002277532.1| GTPase ObgE [Gluconacetobacter diazotrophicus PAl 5] gi|261266902|sp|A9H0F1|OBG_GLUDA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|209532980|gb|ACI52917.1| GTP-binding protein Obg/CgtA [Gluconacetobacter diazotrophicus PAl 5] Length = 350 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 177/331 (53%), Positives = 242/331 (73%), Gaps = 1/331 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+Y++SGDGG G ++FRREK+IEFGGPDGG+GGRGGD+ +A NLNTLIDFR Sbjct: 1 MKFLDQAKIYVKSGDGGDGVVAFRREKYIEFGGPDGGNGGRGGDIVFEAAGNLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHF+A+ G G +R+GA V++ VPVGTQ+F+ED +++ DLDQ G+RI+L G Sbjct: 61 YTQHFRARKGGNGAGSDRTGAAAAPVLIQVPVGTQIFDEDRETMLADLDQPGKRIVLCHG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNAHFK+STN+AP A+ G G+E+ IWL+LKLIAD+G++GLPNAGKSTFL+ V+ Sbjct: 121 GDGGRGNAHFKTSTNRAPRRADKGWPGEERWIWLRLKLIADVGLVGLPNAGKSTFLSVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+P LG+V+ +EF++ADIPG+I+ AH+GAG+GDRFL H ER V Sbjct: 181 AARPKIADYPFTTLHPQLGVVRLSVAEEFVIADIPGLIEGAHEGAGLGDRFLGHVERCAV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH+V +V A++ I EL AY+ L K EI+ L++ID + ++ ++ L Sbjct: 241 LLHLVDGAAGDVVKAWRTIRHELEAYDGGLAAKPEIIALNKIDAMTPQQISSRRRALEKA 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G S +T + +L L D++ + R Sbjct: 301 SGMPVVTLSGVTRQNLDDVLRLLQDRVTATR 331 >gi|302381260|ref|YP_003817083.1| GTP-binding protein Obg/CgtA [Brevundimonas subvibrioides ATCC 15264] gi|302191888|gb|ADK99459.1| GTP-binding protein Obg/CgtA [Brevundimonas subvibrioides ATCC 15264] Length = 350 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 183/331 (55%), Positives = 234/331 (70%), Gaps = 1/331 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG+GGAG +SFRREKFI GGPDGG GG GG+VW++A LNTLID+R Sbjct: 1 MKFLDQAKIYIRSGNGGAGSVSFRREKFIPNGGPDGGDGGNGGNVWVEAVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA G G R GAKGED+VL VPVGTQV ED +++ D+ + GQ+ +L G Sbjct: 61 YQQHFKAPTGGHGQGRQMHGAKGEDIVLKVPVGTQVLGEDKETVVLDMVEAGQKELLLSG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN FK NQAP +ANPG GQE IWL+LKLIADIG+ GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNVRFKGPINQAPRHANPGQEGQEMWIWLRLKLIADIGLAGLPNAGKSTFLAAAS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V E F++ADIPG+I+ A +GAG+G RFL H ER+ Sbjct: 181 AARPKIADYPFTTLAPNLGMVDLSPGERFVIADIPGLIEGASEGAGLGTRFLGHVERSAS 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H++ +++V AY+ I EL AY L K EI+ L++ID + + K ELA Sbjct: 241 LIHLIDGTQDDVAEAYRIIRGELDAYGEGLADKQEILALNKIDALTPEAREEKAAELAAV 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G+ P S ++G G+P++L ++ R Sbjct: 301 AGRRPMLVSGVSGEGVPELLRAAWAEVRKTR 331 >gi|162148943|ref|YP_001603404.1| GTPase ObgE [Gluconacetobacter diazotrophicus PAl 5] gi|161787520|emb|CAP57116.1| Guanosine triphosphate binding protein, GTP-binding protein [Gluconacetobacter diazotrophicus PAl 5] Length = 386 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 177/331 (53%), Positives = 242/331 (73%), Gaps = 1/331 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+Y++SGDGG G ++FRREK+IEFGGPDGG+GGRGGD+ +A NLNTLIDFR Sbjct: 37 MKFLDQAKIYVKSGDGGDGVVAFRREKYIEFGGPDGGNGGRGGDIVFEAAGNLNTLIDFR 96 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHF+A+ G G +R+GA V++ VPVGTQ+F+ED +++ DLDQ G+RI+L G Sbjct: 97 YTQHFRARKGGNGAGSDRTGAAAAPVLIQVPVGTQIFDEDRETMLADLDQPGKRIVLCHG 156 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNAHFK+STN+AP A+ G G+E+ IWL+LKLIAD+G++GLPNAGKSTFL+ V+ Sbjct: 157 GDGGRGNAHFKTSTNRAPRRADKGWPGEERWIWLRLKLIADVGLVGLPNAGKSTFLSVVS 216 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+P LG+V+ +EF++ADIPG+I+ AH+GAG+GDRFL H ER V Sbjct: 217 AARPKIADYPFTTLHPQLGVVRLSVAEEFVIADIPGLIEGAHEGAGLGDRFLGHVERCAV 276 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH+V +V A++ I EL AY+ L K EI+ L++ID + ++ ++ L Sbjct: 277 LLHLVDGAAGDVVKAWRTIRHELEAYDGGLAAKPEIIALNKIDAMTPQQISSRRRALEKA 336 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G S +T + +L L D++ + R Sbjct: 337 SGMPVVTLSGVTRQNLDDVLRLLQDRVTATR 367 >gi|149202797|ref|ZP_01879769.1| GTP-binding protein, GTP1/OBG family [Roseovarius sp. TM1035] gi|149144079|gb|EDM32113.1| GTP-binding protein, GTP1/OBG family [Roseovarius sp. TM1035] Length = 347 Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 188/330 (56%), Positives = 241/330 (73%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GGAG +SFRREKFIEFGGPDGG GG GG VW +A LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGGGGAGSVSFRREKFIEFGGPDGGDGGNGGSVWAEAVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A+ G GM R R+GA G+D+VL VPVGT++ +ED +++ D+ + GQR++LA G Sbjct: 61 YQQHFFARSGTPGMGRQRTGASGDDIVLRVPVGTEILDEDMETVLADMTEIGQRVLLAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN HFK+STNQAP ANPG G E+ IWL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNLHFKTSTNQAPRRANPGQEGIERTIWLRLKLIADVGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I+ A +G G+GD FL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDNVEFVVADIPGLIEGASEGRGLGDLFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V ++ YQ I+ EL AY L K + L++IDT+D + A ++EL C Sbjct: 241 LHLVDGSSGDLVGDYQTIITELEAYGGGLADKPRVAVLNKIDTLDDEERAFLRDELEAAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G S ++G G+ ++L L ++I + R Sbjct: 301 GTPVMLMSGVSGEGVTEVLRALRERIDADR 330 >gi|254459654|ref|ZP_05073070.1| GTP-binding protein Obg/CgtA [Rhodobacterales bacterium HTCC2083] gi|206676243|gb|EDZ40730.1| GTP-binding protein Obg/CgtA [Rhodobacteraceae bacterium HTCC2083] Length = 345 Score = 345 bits (886), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 181/326 (55%), Positives = 234/326 (71%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG G +SFRREKFIE+GGP+GG GG GG VW++ LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGGGGGGSVSFRREKFIEYGGPNGGDGGCGGSVWVETVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A+ G+ GM + R+G G+D++L VPVGT+V +ED ++I D+ + GQR+++A G Sbjct: 61 YQQHFFAKSGQPGMGQGRTGKDGDDIILRVPVGTEVMDEDQETVIADMTELGQRVLIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKS+TNQAP ANPG G E+ IWL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGFGNLHFKSATNQAPRRANPGQEGVERTIWLRLKLIADVGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I+ AH+G G+G RFL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDNVEFVVADIPGLIEGAHEGVGLGVRFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ EN+ Y I+ EL AY EL +K + L+++D +D++ A K L Sbjct: 241 LHLIDGTSENIADDYNTIIGELEAYGGELAEKPRVTVLNKVDALDAEMRAEAKAVLEEAS 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G E S G ++L L +I Sbjct: 301 GGPVMEMSGAAKLGTTEVLRALRAEI 326 >gi|149915191|ref|ZP_01903719.1| 50S ribosomal protein L27 [Roseobacter sp. AzwK-3b] gi|149810912|gb|EDM70751.1| 50S ribosomal protein L27 [Roseobacter sp. AzwK-3b] Length = 345 Score = 345 bits (886), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 183/326 (56%), Positives = 236/326 (72%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKV+IRSG GG G ISFRREKFIE+GGPDGG GG GG VW +A LNTLIDFR Sbjct: 1 MKFLDLAKVHIRSGAGGGGCISFRREKFIEYGGPDGGDGGNGGSVWAEAVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF +++G+ GM + R+G G+D+VL VPVGT++ +ED ++I DL + GQR++LA G Sbjct: 61 YQQHFFSKNGQPGMGQQRTGKTGDDIVLRVPVGTEILDEDQETVIADLTEIGQRVLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN HFKS+TNQAP ANPG G E+ +WL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNLHFKSATNQAPRRANPGQPGVERTLWLRLKLIADVGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I AH+G G+GD FL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGIDEVEFVVADIPGLIGGAHEGRGLGDLFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V +++ YQ I+ EL AY L K + L++ID +D + A + EL C Sbjct: 241 LHLVDGTSQSIAEDYQTIIHELEAYGGHLADKPRVTVLNKIDALDDEERAAARAELEEAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G E S + G+ ++L L +I Sbjct: 301 GCEVLEMSGVARQGVTEVLRRLRLEI 326 >gi|114766181|ref|ZP_01445181.1| GTP-binding protein, GTP1/OBG family [Pelagibaca bermudensis HTCC2601] gi|114541552|gb|EAU44595.1| GTP-binding protein, GTP1/OBG family [Roseovarius sp. HTCC2601] Length = 343 Score = 345 bits (885), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 180/323 (55%), Positives = 231/323 (71%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVY+RSG GG G ISFRREK+IEFGGPDGG GG GGDVW + LNTLIDFR Sbjct: 1 MKFLDLAKVYLRSGSGGNGCISFRREKYIEFGGPDGGDGGGGGDVWAETVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A +G GM R R+G G+D+VL VPVGT++ +ED ++I D+ + GQR++L G Sbjct: 61 YQQHFFADNGRPGMGRQRTGKDGDDIVLRVPVGTEILDEDEETVIADMTELGQRVLLCKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN HFK+STNQAP ANPG G E+ +WL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNLHFKTSTNQAPRRANPGQPGVERTVWLRLKLIADVGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V KEF++ADIPG+I+ AH+G G+GD FL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDGKEFVVADIPGLIEGAHEGRGLGDLFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V + Y I++E+ Y + L K + L++IDT+D + A + EL + Sbjct: 241 LHLVDGSSGTLLEDYDTIINEIEQYGAGLDDKPRVTVLNKIDTMDDEERAFLREELEARS 300 Query: 301 GQVPFEFSSITGHGIPQILECLH 323 G S +G G ++L L Sbjct: 301 GGKVLLMSGASGEGTTEVLRALR 323 >gi|260427260|ref|ZP_05781239.1| Obg family GTPase CgtA [Citreicella sp. SE45] gi|260421752|gb|EEX15003.1| Obg family GTPase CgtA [Citreicella sp. SE45] Length = 343 Score = 345 bits (885), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 182/326 (55%), Positives = 234/326 (71%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD KVYIRSG GG G ISFRREK+IEFGGPDGG GG GGDVW +A LNTLIDFR Sbjct: 1 MKFLDLCKVYIRSGSGGNGCISFRREKYIEFGGPDGGDGGGGGDVWAEAVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G G R R+G G+D+VL VPVGT++ +ED ++I DL G+R++LA G Sbjct: 61 YQQHFFAENGRPGAGRQRTGKDGDDIVLRVPVGTEILDEDEETVIADLTTLGERVLLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN HFKS+TNQAP ANPG G E+ IWL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNLHFKSATNQAPRRANPGQPGVERTIWLRLKLIADVGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V +EF++ADIPG+I+ AH+G G+GD FL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDGREFVVADIPGLIEGAHEGRGLGDLFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V ++ Y I++E+ Y + L +K + L++IDT+D + A + EL + Sbjct: 241 LHLVDGSSGSLLEDYDTIINEIEQYGAGLAEKPRVTVLNKIDTMDDEERAFLREELEARS 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G S +G G ++L L I Sbjct: 301 GGKVLLMSGASGEGTTEVLRALRSYI 326 >gi|254487306|ref|ZP_05100511.1| GTP-binding protein Obg/CgtA [Roseobacter sp. GAI101] gi|214044175|gb|EEB84813.1| GTP-binding protein Obg/CgtA [Roseobacter sp. GAI101] Length = 344 Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 177/326 (54%), Positives = 230/326 (70%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD KVYIRSG GG G +SFRREK+IE+GGPDGG GG GG VW +A LNTLIDFR Sbjct: 1 MKFLDLCKVYIRSGAGGGGCVSFRREKYIEYGGPDGGDGGSGGSVWAEAVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G+ GM + R+G G+D+VL VPVGT++ +ED ++I D+ + GQR+ LA G Sbjct: 61 YQQHFFARNGQPGMGKQRTGKDGDDIVLRVPVGTELLDEDQETVIADMTELGQRVELARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN HFKS+TNQAP ANPG G E+ +WL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNLHFKSATNQAPRRANPGQEGVERTLWLRLKLIADVGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I+ A +G G+GD FL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDNTEFVVADIPGLIEGASEGRGLGDLFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V + + YQ I+ EL Y +L K + L++ID +D + + EL C Sbjct: 241 LHLVDGTSQTIAEDYQTIITELEKYGGDLADKPRVTVLNKIDALDEEEREIARTELEEAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G S + G+ +L L +I Sbjct: 301 GGEVMMMSGVAREGVTDVLRALRGQI 326 >gi|84687196|ref|ZP_01015077.1| GTP-binding protein, GTP1/OBG family protein [Maritimibacter alkaliphilus HTCC2654] gi|84664784|gb|EAQ11267.1| GTP-binding protein, GTP1/OBG family protein [Rhodobacterales bacterium HTCC2654] Length = 348 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 183/330 (55%), Positives = 236/330 (71%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG G +SFRREK+IEFGGPDGG GGRGGDV I+ LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGSGGNGCVSFRREKYIEFGGPDGGDGGRGGDVVIEVVEGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G+ GM R+G G+D+VL VPVGT+V +ED ++I D+ + G+R+++A G Sbjct: 61 YQQHFFAKNGQPGMGNQRTGKSGDDIVLRVPVGTEVLDEDEETVIADMTEVGERLVIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFK++TNQAP AN G G E++IWL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGFGNLHFKTATNQAPRRANSGQPGIERVIWLRLKLIADVGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL PNLG+V EF++ADIPG+I+ AH+G G+GD FL H ER VL Sbjct: 181 NARPKIADYPFTTLVPNLGVVGVDNVEFVVADIPGLIEGAHEGRGLGDTFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ E+V Y+ I+ EL AY L K I L++ID + + K+ L Sbjct: 241 LHLIDGTAEDVATDYETIVGELEAYGGILAHKPRITVLNKIDALLDEEREEKRAALEEAS 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G +E S + G+ Q+L L +I + R Sbjct: 301 GGTVYEMSGVAKDGVTQVLRALKAEIGADR 330 >gi|161898752|ref|YP_190590.2| GTPase ObgE [Gluconobacter oxydans 621H] gi|261266903|sp|Q5FUL2|OBG_GLUOX RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 336 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 239/335 (71%), Gaps = 1/335 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+Y+RSGDGG G I+FRREK+IEFGGPDGG GGRGGD+ +A LNTLIDFR Sbjct: 1 MKFLDQAKIYVRSGDGGDGVIAFRREKYIEFGGPDGGDGGRGGDIIFRAVPGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHFKA+ G G NR+GA +V + VPVGTQ+F+ED +L+ DLD EG+ ++L G Sbjct: 61 YTQHFKARKGGNGAGSNRTGAAAANVTINVPVGTQIFDEDRETLLADLDAEGKEVLLCRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSSTN+AP A+ G G+E+ +WL+LKLIADIG++GLPNAGKST L+ + Sbjct: 121 GDGGLGNTHFKSSTNRAPRRADKGWPGEERWVWLRLKLIADIGLVGLPNAGKSTLLSVAS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 RA+PKIADYPFTTL+P LG+V+ +EF++ADIPG+I+ A +GAG+GDRFL H ER Sbjct: 181 RARPKIADYPFTTLHPQLGVVRLNNTEEFVIADIPGLIEGASEGAGLGDRFLGHVERCAT 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ E + ++ I EL AY+ EL K EI+ L++ D++ + KK LA Sbjct: 241 LLHLIDGTESQIVKHWRLIRKELEAYDPELAAKPEIIVLNKCDSLTPTQRSAKKRALAKA 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 G S T G+P++L L D++ + + + + Sbjct: 301 SGAEVMMLSGATQEGLPELLRLLQDRVTAAKRDRQ 335 >gi|58001040|gb|AAW59934.1| GTP-binding protein [Gluconobacter oxydans 621H] Length = 350 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 239/335 (71%), Gaps = 1/335 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+Y+RSGDGG G I+FRREK+IEFGGPDGG GGRGGD+ +A LNTLIDFR Sbjct: 15 MKFLDQAKIYVRSGDGGDGVIAFRREKYIEFGGPDGGDGGRGGDIIFRAVPGLNTLIDFR 74 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHFKA+ G G NR+GA +V + VPVGTQ+F+ED +L+ DLD EG+ ++L G Sbjct: 75 YTQHFKARKGGNGAGSNRTGAAAANVTINVPVGTQIFDEDRETLLADLDAEGKEVLLCRG 134 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSSTN+AP A+ G G+E+ +WL+LKLIADIG++GLPNAGKST L+ + Sbjct: 135 GDGGLGNTHFKSSTNRAPRRADKGWPGEERWVWLRLKLIADIGLVGLPNAGKSTLLSVAS 194 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 RA+PKIADYPFTTL+P LG+V+ +EF++ADIPG+I+ A +GAG+GDRFL H ER Sbjct: 195 RARPKIADYPFTTLHPQLGVVRLNNTEEFVIADIPGLIEGASEGAGLGDRFLGHVERCAT 254 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ E + ++ I EL AY+ EL K EI+ L++ D++ + KK LA Sbjct: 255 LLHLIDGTESQIVKHWRLIRKELEAYDPELAAKPEIIVLNKCDSLTPTQRSAKKRALAKA 314 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 G S T G+P++L L D++ + + + + Sbjct: 315 SGAEVMMLSGATQEGLPELLRLLQDRVTAAKRDRQ 349 >gi|312114305|ref|YP_004011901.1| GTP-binding protein Obg/CgtA [Rhodomicrobium vannielii ATCC 17100] gi|311219434|gb|ADP70802.1| GTP-binding protein Obg/CgtA [Rhodomicrobium vannielii ATCC 17100] Length = 344 Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 200/319 (62%), Positives = 237/319 (74%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+FLD+AKVYIRSGDGG+G +SFRREKFIEFGGPDGG GGRGG ++++ +NLNTLIDFR Sbjct: 1 MRFLDQAKVYIRSGDGGSGCLSFRREKFIEFGGPDGGDGGRGGSIYVECVTNLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA +G G NR GA G D VL VP GTQVF ED +LI DL GQR ++A G Sbjct: 61 YQQHFKAGNGRPGEGANRHGASGSDTVLRVPPGTQVFGEDNETLIADLTTPGQRALIAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGNAHFKSSTN+AP NPG G E IWL+LKLIAD GI+GLPNAGKSTFLA+V+ Sbjct: 121 GNGGFGNAHFKSSTNRAPRRINPGQQGAELTIWLRLKLIADAGIVGLPNAGKSTFLAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+VK G +F+LADIPG+I+ AH+GAGIGDRFL H ER V+ Sbjct: 181 AAKPKIADYPFTTLHPNLGVVKVGDTDFVLADIPGLIEGAHEGAGIGDRFLGHVERCRVI 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E +V AAY+ I EL AY + L +K EIV LS+ D V + A K L Sbjct: 241 LHLVDVTEPDVAAAYRTIRGELKAYGAGLGRKREIVALSKCDAVTPEVAAEKAAALKAVA 300 Query: 301 GQVPFEFSSITGHGIPQIL 319 + P S ++G G+ L Sbjct: 301 RKNPLLISGVSGAGVRDAL 319 >gi|258542954|ref|YP_003188387.1| GTPase ObgE [Acetobacter pasteurianus IFO 3283-01] gi|256634032|dbj|BAI00008.1| GTP-binding protein ObgE/CgtA [Acetobacter pasteurianus IFO 3283-01] gi|256637092|dbj|BAI03061.1| GTP-binding protein ObgE/CgtA [Acetobacter pasteurianus IFO 3283-03] gi|256640144|dbj|BAI06106.1| GTP-binding protein ObgE/CgtA [Acetobacter pasteurianus IFO 3283-07] gi|256643201|dbj|BAI09156.1| GTP-binding protein ObgE/CgtA [Acetobacter pasteurianus IFO 3283-22] gi|256646256|dbj|BAI12204.1| GTP-binding protein ObgE/CgtA [Acetobacter pasteurianus IFO 3283-26] gi|256649309|dbj|BAI15250.1| GTP-binding protein ObgE/CgtA [Acetobacter pasteurianus IFO 3283-32] gi|256652295|dbj|BAI18229.1| GTP-binding protein ObgE/CgtA [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655353|dbj|BAI21280.1| GTP-binding protein ObgE/CgtA [Acetobacter pasteurianus IFO 3283-12] Length = 339 Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 173/331 (52%), Positives = 243/331 (73%), Gaps = 1/331 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+Y+RSGDGG G +FRREK+IEFGGPDGG+GGRGGD+ +A NLNTLIDFR Sbjct: 1 MKFLDQAKIYVRSGDGGDGVTAFRREKYIEFGGPDGGNGGRGGDIIFEAVPNLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHF+A+ G G +R+GA V++ VP+GTQ+ ++D ++L+ DLD+ G+RI L G Sbjct: 61 YTQHFRARKGGNGAGSDRTGAAASPVIIKVPIGTQIMDDDRVTLLADLDEAGKRITLCRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG+GNAHFKSSTN+AP ++ G G+E+ +WL+LKLIAD+G++GLPNAGKSTFL+ V+ Sbjct: 121 GDGGYGNAHFKSSTNRAPRRSDKGWPGEERWVWLRLKLIADVGLVGLPNAGKSTFLSVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL+P LG+V+ +EF++ADIPG+I+ AH+G G+GDRFL H ER V Sbjct: 181 AAKPKIADYPFTTLHPQLGVVRLSMTEEFVVADIPGLIEGAHEGTGLGDRFLGHVERCAV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ +V A++ I EL+AY+ L +K EI+ L+++D + + ++ L Sbjct: 241 LLHLIDGAAGSVVDAWRTIRHELAAYDGGLAEKPEIIALNKMDAMTPREASSRRAALEKA 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G S+ T G+P++L L +++ R Sbjct: 301 SGAPVVLISAATHQGVPELLRMLQNQVTENR 331 >gi|329115561|ref|ZP_08244283.1| GTPase Obg [Acetobacter pomorum DM001] gi|326694989|gb|EGE46708.1| GTPase Obg [Acetobacter pomorum DM001] Length = 339 Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 173/331 (52%), Positives = 243/331 (73%), Gaps = 1/331 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+Y+RSGDGG G +FRREK+IEFGGPDGG+GGRGGDV +A NLNTLIDFR Sbjct: 1 MKFLDQAKIYVRSGDGGDGVTAFRREKYIEFGGPDGGNGGRGGDVIFEAVPNLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHF+A+ G G +R+GA V++ VP+GTQ+ ++D ++L+ DL++ G+RI L G Sbjct: 61 YTQHFRARKGGNGAGSDRTGAAASPVIIKVPIGTQIMDDDRVTLLADLNEAGKRITLCRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG+GNAHFKSSTN+AP ++ G G+E+ +WL+LKLIAD+G++GLPNAGKSTFL+ V+ Sbjct: 121 GDGGYGNAHFKSSTNRAPRRSDKGWPGEERWVWLRLKLIADVGLVGLPNAGKSTFLSVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL+P LG+V+ +EF++ADIPG+I+ AH+G G+GDRFL H ER V Sbjct: 181 AAKPKIADYPFTTLHPQLGVVRLSMTEEFVVADIPGLIEGAHEGTGLGDRFLGHVERCAV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ +V A++ I EL+AY+ L +K EI+ L+++D + + ++ L Sbjct: 241 LLHLIDGAAGSVVDAWRTIRHELAAYDGGLAEKPEIIALNKMDAMTPREASSRRAALEKA 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G S+ T G+P++L L +++ R Sbjct: 301 SGAPVVLISAATHQGVPELLRMLQNQVTETR 331 >gi|88864323|gb|ABD55200.1| Small GTP-binding protein domain [Jannaschia sp. CCS1] Length = 358 Score = 342 bits (876), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 187/330 (56%), Positives = 238/330 (72%), Gaps = 1/330 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG G +SFRREK+IE+GGPDGG GG GG+V+I+ LNTLIDFR Sbjct: 15 MKFLDLAKVYIRSGAGGGGSVSFRREKYIEYGGPDGGDGGGGGNVYIEVVEGLNTLIDFR 74 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G+ GM + R+G G D+VL VP GT+V EED +LI DL++ GQRI +A G Sbjct: 75 YQQHFFAKNGQPGMGKQRTGKDGADIVLRVPAGTEVLEEDQETLIADLEEVGQRICIAKG 134 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKS+TNQAP ANPG G E+ IWL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 135 GNGGFGNLHFKSATNQAPRRANPGQEGVERTIWLRLKLIADVGLLGLPNAGKSTFLAATS 194 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL PNLG+V EF++ADIPG+I+ A +G G+GD FL H ER L Sbjct: 195 NARPKIADYPFTTLVPNLGVVGVDGAEFVIADIPGLIEGASEGRGLGDTFLGHVERCAAL 254 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E+V YQ I+ EL AY EL K I L++ID ++ + LA+K+ L Sbjct: 255 LHLVDGTSEDVVGDYQTIIAELEAYGGELALKPRITALNKIDAIEPEELAKKRAALGKVA 314 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G + E S + G+ ++L L ++ + R Sbjct: 315 GNL-MEMSGVARTGVTEVLRVLRARVDADR 343 >gi|161898395|ref|YP_510225.2| GTPase ObgE [Jannaschia sp. CCS1] gi|261266900|sp|Q28Q12|OBG_JANSC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 344 Score = 342 bits (876), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 187/330 (56%), Positives = 238/330 (72%), Gaps = 1/330 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG G +SFRREK+IE+GGPDGG GG GG+V+I+ LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGAGGGGSVSFRREKYIEYGGPDGGDGGGGGNVYIEVVEGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G+ GM + R+G G D+VL VP GT+V EED +LI DL++ GQRI +A G Sbjct: 61 YQQHFFAKNGQPGMGKQRTGKDGADIVLRVPAGTEVLEEDQETLIADLEEVGQRICIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKS+TNQAP ANPG G E+ IWL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGFGNLHFKSATNQAPRRANPGQEGVERTIWLRLKLIADVGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL PNLG+V EF++ADIPG+I+ A +G G+GD FL H ER L Sbjct: 181 NARPKIADYPFTTLVPNLGVVGVDGAEFVIADIPGLIEGASEGRGLGDTFLGHVERCAAL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E+V YQ I+ EL AY EL K I L++ID ++ + LA+K+ L Sbjct: 241 LHLVDGTSEDVVGDYQTIIAELEAYGGELALKPRITALNKIDAIEPEELAKKRAALGKVA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G + E S + G+ ++L L ++ + R Sbjct: 301 GNL-MEMSGVARTGVTEVLRVLRARVDADR 329 >gi|163746343|ref|ZP_02153701.1| GTPase ObgE [Oceanibulbus indolifex HEL-45] gi|161380228|gb|EDQ04639.1| GTPase ObgE [Oceanibulbus indolifex HEL-45] Length = 344 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 179/326 (54%), Positives = 233/326 (71%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD KVYIRSG GG G +SFRREK+IE+GGPDGG GG GG VW +A LNTLIDFR Sbjct: 1 MKFLDLCKVYIRSGGGGGGCVSFRREKYIEYGGPDGGDGGTGGSVWAEAVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G+ GM + R+G G+D++L VPVGT++ +ED ++ICDL + GQR+ LA G Sbjct: 61 YQQHFFAKNGQPGMGKQRTGKDGDDIILRVPVGTEILDEDQETVICDLTELGQRVQLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN HFKSSTNQAP +NPG G E+ +WL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNLHFKSSTNQAPRRSNPGQEGVERTLWLRLKLIADVGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I+ A +G G+GD FL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDNTEFVVADIPGLIEGASEGRGLGDLFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ E V + I+ EL AY EL +K + L+++D +D + A + EL Sbjct: 241 LHLIDGTSETVAEDCRTIIGELEAYGGELAEKPRVTVLNKVDALDEEERAERLKELEKAS 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G S + G G+ ++L L I Sbjct: 301 GGDVMMMSGVAGEGVTEVLRTLRQNI 326 >gi|85702932|ref|ZP_01034036.1| GTP-binding protein, GTP1/OBG family protein [Roseovarius sp. 217] gi|85671860|gb|EAQ26717.1| GTP-binding protein, GTP1/OBG family protein [Roseovarius sp. 217] Length = 347 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 185/330 (56%), Positives = 236/330 (71%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG+G +SFRREKFIE+GGPDGG GG GG VW + LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGGGGSGCVSFRREKFIEYGGPDGGDGGNGGSVWAETVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A G GM R R+GA G+D+VL VPVGT++ +ED ++I D+ Q GQR++LA G Sbjct: 61 YQQHFFAHSGTPGMGRQRTGASGDDIVLRVPVGTEILDEDMETVIADMTQLGQRVLLAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN HFK+STNQAP ANPG G E+ IWL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNLHFKTSTNQAPRRANPGQEGVERTIWLRLKLIADVGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I+ A +G G+GD FL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDNVEFVVADIPGLIEGASEGRGLGDLFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V ++ YQ I+ EL AY L K + L+++DT+D + + EL C Sbjct: 241 LHLVDGSSGDIVGDYQTIITELEAYGGGLADKPRVTVLNKVDTLDEEEREFLREELEAAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G S ++G G+ ++L L +I + R Sbjct: 301 GTPVMLMSGVSGEGVTEVLRALRARIDADR 330 >gi|294085421|ref|YP_003552181.1| GTP-binding protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664996|gb|ADE40097.1| GTP-binding protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 344 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 177/322 (54%), Positives = 231/322 (71%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+Y RSG GG G +SFRRE + FGGPDGG+GGRGGD+ +A + LNTLID+R Sbjct: 1 MKFLDQAKIYARSGHGGPGSVSFRREAHVPFGGPDGGNGGRGGDIIARAVNGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G G R+RSGA G+ V++ +PVGTQ+ +D +++ DL +EGQ I+LA G Sbjct: 61 YQQHFKAESGRPGAGRDRSGASGDSVIMRLPVGTQILSDDQQTVLADLTEEGQEIVLATG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNA FKSSTN+AP + PG GQE +WL+LKLIAD G++GLPNAGKSTFLA+V+ Sbjct: 121 GSGGKGNAFFKSSTNRAPRKSQPGEPGQEMWVWLRLKLIADAGLLGLPNAGKSTFLAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+PNLG+V KEF++ADIPG+I+ AH+GAG+G RFL H ER VL Sbjct: 181 AAKPKIADYPFTTLHPNLGVVAVDAKEFVMADIPGLIEGAHEGAGLGHRFLGHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V A ++ A++ + EL Y L K EIVGL+++D D + L + Sbjct: 241 LHLVDATADDPIEAWKILRRELKEYGGGLNDKPEIVGLTKLDATPPDYAEDLADALRAEG 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 SS++G G+ +L L Sbjct: 301 AGTVLPLSSVSGEGVTSVLRAL 322 >gi|146279806|ref|YP_001169964.1| GTPase ObgE [Rhodobacter sphaeroides ATCC 17025] gi|145558047|gb|ABP72659.1| glutamate 5-kinase [Rhodobacter sphaeroides ATCC 17025] Length = 359 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 183/332 (55%), Positives = 234/332 (70%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD KVYIRSG GG G +SFRREKFIEFGGPDGG GG GG VW +A LNTLIDFR Sbjct: 18 MKFLDLCKVYIRSGGGGGGCVSFRREKFIEFGGPDGGDGGNGGSVWAEAVEGLNTLIDFR 77 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A+ G+ GM R+G GED+VL VPVGT++ +ED ++I DL + GQRI+LA G Sbjct: 78 YQQHFFAKSGQPGMGSQRTGKSGEDIVLKVPVGTEIIDEDEETVIADLTEVGQRILLAQG 137 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN FKSSTN+AP ANPG G ++ IWL+LKLIAD G++GLPNAGKSTFL++ + Sbjct: 138 GNGGWGNLRFKSSTNRAPARANPGQPGIDRTIWLRLKLIADAGLLGLPNAGKSTFLSATS 197 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL PNLG+V KEF++ADIPG+I+ A +G G+GD+FL H ER VL Sbjct: 198 NARPKIADYPFTTLVPNLGVVGVDGKEFVIADIPGLIEGASEGRGLGDQFLAHVERCSVL 257 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V + Y+ I+ EL AY +L K I +++ID +D ++ ++ L Sbjct: 258 LHLVDGTSSTIVKDYRTIIGELEAYGGDLAGKPRITAMNKIDAMDPRQISDRRRALEKAT 317 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G F S + G G+ ++L L +I RG+ Sbjct: 318 GGKVFTISGVAGTGLMEVLRALWAEIDGARGD 349 >gi|296116420|ref|ZP_06835034.1| GTPase ObgE [Gluconacetobacter hansenii ATCC 23769] gi|295977013|gb|EFG83777.1| GTPase ObgE [Gluconacetobacter hansenii ATCC 23769] Length = 339 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 175/333 (52%), Positives = 246/333 (73%), Gaps = 1/333 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK++++SGDGG G I+FRREK+IEFGGPDGG+GGRGGD+ A +NLNTLIDFR Sbjct: 1 MKFLDQAKIFVKSGDGGDGVIAFRREKYIEFGGPDGGNGGRGGDIIFVAVANLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHF+A+ G G +R+GA VV+ VPVGTQ+F++D +L+ DLD+ G+R++L G Sbjct: 61 YTQHFRARKGGNGAGSDRTGAAAPAVVIQVPVGTQIFDDDRETLLGDLDEAGKRLLLCRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNAH+K+STN+AP A+PG G+E+ +WL+LKLIAD G++GLPNAGKSTFL+ V+ Sbjct: 121 GDGGRGNAHYKTSTNRAPRRADPGWPGEERWVWLRLKLIADAGLVGLPNAGKSTFLSVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+P LG+V+ +EF++ADIPG+I+ AH+G G+GDRFL H ER V Sbjct: 181 AARPKIADYPFTTLHPQLGVVRLSVTEEFVIADIPGLIEGAHEGTGLGDRFLGHVERCAV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H++ +E+V AA++ I EL Y L +K EI+ L++ID + + +A + L Sbjct: 241 LVHLIDGTQEDVVAAWRTIRHELHEYGGGLAEKPEIIVLNKIDAMLDEDIAERCALLEQA 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G S ++ G+ ++L + D+I IR + Sbjct: 301 SGAPVMTMSGVSRQGVDKVLRLVQDQITRIRAD 333 >gi|163793763|ref|ZP_02187737.1| GTP-binding protein [alpha proteobacterium BAL199] gi|159180874|gb|EDP65391.1| GTP-binding protein [alpha proteobacterium BAL199] Length = 351 Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 182/330 (55%), Positives = 236/330 (71%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD++KV+I+SGDGG G +SFRRE FIEFGGPDGG GGRGGDV ++ + LNTLIDFR Sbjct: 1 MKFLDQSKVFIKSGDGGNGCLSFRREAFIEFGGPDGGDGGRGGDVIVECVAALNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKAQ G GM RN SGA G+D+V+ VP+GTQ+++E+ +L+ D+ GQR+ LA G Sbjct: 61 YQQHFKAQSGRPGMGRNMSGAGGKDIVVRVPIGTQIWDEEYQNLLLDMTVPGQRVALAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG+GNA FKSSTNQAP PG G E IWL+LKLIAD G++GLPNAGKSTFLA+VT Sbjct: 121 GDGGYGNARFKSSTNQAPRKTLPGWPGTEFWIWLRLKLIADSGLVGLPNAGKSTFLAAVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL+P LG+V+ E +LADIPG+I+ AH+GAG+GDRFL H ER + Sbjct: 181 AAKPKIADYPFTTLHPGLGVVRIDNDELVLADIPGLIEGAHEGAGLGDRFLGHVERCAAI 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E+ A++ + EL AY L +K EI+ +S+ID + + + K+ + Sbjct: 241 LHLVDGTGEDPIGAWRTVRAELEAYEGGLAEKTEILAISKIDAMRDEDVQALKDLFVEEI 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G P S +G G +L + + + R Sbjct: 301 GIEPMAVSGASGAGTRAVLRRIMTHVQAAR 330 >gi|261277912|sp|A4WZ45|OBG_RHOS5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 342 Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 183/332 (55%), Positives = 234/332 (70%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD KVYIRSG GG G +SFRREKFIEFGGPDGG GG GG VW +A LNTLIDFR Sbjct: 1 MKFLDLCKVYIRSGGGGGGCVSFRREKFIEFGGPDGGDGGNGGSVWAEAVEGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A+ G+ GM R+G GED+VL VPVGT++ +ED ++I DL + GQRI+LA G Sbjct: 61 YQQHFFAKSGQPGMGSQRTGKSGEDIVLKVPVGTEIIDEDEETVIADLTEVGQRILLAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN FKSSTN+AP ANPG G ++ IWL+LKLIAD G++GLPNAGKSTFL++ + Sbjct: 121 GNGGWGNLRFKSSTNRAPARANPGQPGIDRTIWLRLKLIADAGLLGLPNAGKSTFLSATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL PNLG+V KEF++ADIPG+I+ A +G G+GD+FL H ER VL Sbjct: 181 NARPKIADYPFTTLVPNLGVVGVDGKEFVIADIPGLIEGASEGRGLGDQFLAHVERCSVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V + Y+ I+ EL AY +L K I +++ID +D ++ ++ L Sbjct: 241 LHLVDGTSSTIVKDYRTIIGELEAYGGDLAGKPRITAMNKIDAMDPRQISDRRRALEKAT 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G F S + G G+ ++L L +I RG+ Sbjct: 301 GGKVFTISGVAGTGLMEVLRALWAEIDGARGD 332 >gi|221368985|ref|YP_002520081.1| GTPase ObgE [Rhodobacter sphaeroides KD131] gi|261277740|sp|B9KW04|OBG_RHOSK RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|221162037|gb|ACM03008.1| Glutamate 5-kinase [Rhodobacter sphaeroides KD131] Length = 342 Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 182/332 (54%), Positives = 234/332 (70%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD KVYIRSG GG G +SFRREKFIEFGGPDGG GG GG VW +A LNTLIDFR Sbjct: 1 MKFLDLCKVYIRSGGGGGGCVSFRREKFIEFGGPDGGDGGNGGSVWAEAVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A+ G+ GM R+G G+D+VL VPVGT++ +ED ++I DL + GQR++LA G Sbjct: 61 YQQHFFAKSGQPGMGSQRTGRSGDDIVLKVPVGTEIIDEDEETVIADLTEVGQRVLLAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN FKSSTN+AP ANPG G ++ IWL+LKLIAD G++GLPNAGKSTFL++ + Sbjct: 121 GNGGWGNLRFKSSTNRAPARANPGQPGIDRTIWLRLKLIADAGLLGLPNAGKSTFLSATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL PNLG+V KEF++ADIPG+I+ A +G G+GD+FL H ER VL Sbjct: 181 NARPKIADYPFTTLVPNLGVVGVDGKEFVIADIPGLIEGASEGRGLGDQFLAHVERCSVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V + Y+ I+ EL AY +L K I +++ID +DS ++ ++ L Sbjct: 241 LHLVDGTSSTIVKDYRTIIGELEAYGGDLALKPRITAMNKIDAMDSKQISDRRRALEKAT 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G F S + G G+ +L L +I RG+ Sbjct: 301 GGKVFTISGVAGTGLMDVLRALWAEIDGARGD 332 >gi|89069456|ref|ZP_01156806.1| GTP-binding protein, GTP1/OBG family protein [Oceanicola granulosus HTCC2516] gi|89044937|gb|EAR51024.1| GTP-binding protein, GTP1/OBG family protein [Oceanicola granulosus HTCC2516] Length = 365 Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 175/326 (53%), Positives = 233/326 (71%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD A+V+IRSG GG G +SFRREKF+E+GGP+GG GG GGDVW +A LNTLIDFR Sbjct: 1 MKFLDLARVHIRSGSGGNGCVSFRREKFVEYGGPNGGDGGTGGDVWAEAVEGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G+ GM R +G G+D+VL VPVGT++ +ED +LI DL + GQR++LA G Sbjct: 61 YQQHFFARNGQAGMGRGMTGKDGDDIVLRVPVGTEILDEDEETLIADLTEVGQRVLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN HFKS+TNQAP AN G G E+ +WL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNLHFKSATNQAPRRANAGQPGVERTLWLRLKLIADVGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PK+ADYPFTTL PNLG+V EF++ADIPG+I A +G G+GD FL H ER+ VL Sbjct: 181 NARPKVADYPFTTLVPNLGVVGVDGVEFVVADIPGLIAGASEGKGLGDVFLGHVERSAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V + ++ I++E+ AY L K + L++IDT+D + A +EL Sbjct: 241 LHLVDGTSGDPGGDWRTIVEEIEAYGEGLADKPRLTVLNKIDTLDEEERAFLLDELKEAG 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 S ++G G+ ++L L +I Sbjct: 301 AGEVLAMSGVSGEGVTEVLRALRAEI 326 >gi|77465003|ref|YP_354506.1| GTPase ObgE [Rhodobacter sphaeroides 2.4.1] gi|126464265|ref|YP_001045378.1| GTPase ObgE [Rhodobacter sphaeroides ATCC 17029] gi|332560605|ref|ZP_08414923.1| GTPase CgtA [Rhodobacter sphaeroides WS8N] gi|123590595|sp|Q3IXX9|OBG_RHOS4 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277738|sp|A3PQJ0|OBG_RHOS1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|77389421|gb|ABA80605.1| GTP1/OBG family protein [Rhodobacter sphaeroides 2.4.1] gi|126106076|gb|ABN78606.1| small GTP-binding protein [Rhodobacter sphaeroides ATCC 17029] gi|332274403|gb|EGJ19719.1| GTPase CgtA [Rhodobacter sphaeroides WS8N] Length = 342 Score = 338 bits (868), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 182/332 (54%), Positives = 234/332 (70%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD KVYIRSG GG G +SFRREKFIEFGGPDGG GG GG VW +A LNTLIDFR Sbjct: 1 MKFLDLCKVYIRSGGGGGGCVSFRREKFIEFGGPDGGDGGNGGSVWAEAVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A+ G+ GM R+G G+D+VL VPVGT++ +ED ++I DL + GQR++LA G Sbjct: 61 YQQHFFAKSGQPGMGSQRTGRSGDDIVLKVPVGTEIIDEDEETVIADLTEVGQRVLLAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN FKSSTN+AP ANPG G ++ IWL+LKLIAD G++GLPNAGKSTFL++ + Sbjct: 121 GNGGWGNLRFKSSTNRAPARANPGQPGIDRTIWLRLKLIADAGLLGLPNAGKSTFLSATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL PNLG+V KEF++ADIPG+I+ A +G G+GD+FL H ER VL Sbjct: 181 NARPKIADYPFTTLVPNLGVVGVDGKEFVIADIPGLIEGASEGRGLGDQFLAHVERCSVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V + Y+ I+ EL AY +L K I +++ID +DS ++ ++ L Sbjct: 241 LHLVDGTSSTIVKDYRTIIGELEAYGGDLALKPRITAMNKIDAMDSRQISDRRRALEKAT 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 G F S + G G+ +L L +I RG+ Sbjct: 301 GGKVFTISGVAGTGLMDVLRALWAEIDGARGD 332 >gi|162139872|ref|YP_745526.2| GTPase ObgE [Granulibacter bethesdensis CGDNIH1] gi|261266904|sp|Q0BRE9|OBG_GRABC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 343 Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 177/335 (52%), Positives = 241/335 (71%), Gaps = 1/335 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+Y++SGDGG G I+FRREK+IEFGGPDGG+GGRGGD+ ++A +NLNTLIDFR Sbjct: 1 MKFLDQAKIYVKSGDGGDGVIAFRREKYIEFGGPDGGNGGRGGDIIVEAVANLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHF+A G G +R+GA DV++ VPVGTQ+ E+D +LI DLD G+RI L G Sbjct: 61 YTQHFRAPKGGNGAGSDRTGAAAPDVLIKVPVGTQILEDDRETLIADLDVPGKRITLCRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNAHFKSSTN+AP A+ G G+E+ +WL+LKLIAD G++GLPNAGKSTFL+ V+ Sbjct: 121 GDGGHGNAHFKSSTNRAPRRADKGWPGEERWVWLRLKLIADAGLVGLPNAGKSTFLSVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+P LG+V+ + EF+LADIPG+I+ AH+GAG+GDRFL H ER V Sbjct: 181 AARPKIADYPFTTLHPQLGVVRLSLQEEFVLADIPGLIEGAHEGAGLGDRFLGHVERCAV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H++ +V A++ + +E+ Y L +K EI+ L++ D + + +++ LA Sbjct: 241 LIHLIDGAAGDVVKAWRTVREEMEGYGGGLTEKPEIIVLNKCDGMTPREASARRSALAKA 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 GQ S +TG G+ +L + + R E Sbjct: 301 SGQTVTVISGVTGEGVQPLLRQVMTYVAQSREERR 335 >gi|114316543|gb|ABI62603.1| GTP-binding protein CgtA [Granulibacter bethesdensis CGDNIH1] Length = 373 Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 177/335 (52%), Positives = 241/335 (71%), Gaps = 1/335 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+Y++SGDGG G I+FRREK+IEFGGPDGG+GGRGGD+ ++A +NLNTLIDFR Sbjct: 31 MKFLDQAKIYVKSGDGGDGVIAFRREKYIEFGGPDGGNGGRGGDIIVEAVANLNTLIDFR 90 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHF+A G G +R+GA DV++ VPVGTQ+ E+D +LI DLD G+RI L G Sbjct: 91 YTQHFRAPKGGNGAGSDRTGAAAPDVLIKVPVGTQILEDDRETLIADLDVPGKRITLCRG 150 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNAHFKSSTN+AP A+ G G+E+ +WL+LKLIAD G++GLPNAGKSTFL+ V+ Sbjct: 151 GDGGHGNAHFKSSTNRAPRRADKGWPGEERWVWLRLKLIADAGLVGLPNAGKSTFLSVVS 210 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+P LG+V+ + EF+LADIPG+I+ AH+GAG+GDRFL H ER V Sbjct: 211 AARPKIADYPFTTLHPQLGVVRLSLQEEFVLADIPGLIEGAHEGAGLGDRFLGHVERCAV 270 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H++ +V A++ + +E+ Y L +K EI+ L++ D + + +++ LA Sbjct: 271 LIHLIDGAAGDVVKAWRTVREEMEGYGGGLTEKPEIIVLNKCDGMTPREASARRSALAKA 330 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 GQ S +TG G+ +L + + R E Sbjct: 331 SGQTVTVISGVTGEGVQPLLRQVMTYVAQSREERR 365 >gi|296532625|ref|ZP_06895325.1| obg family GTPase CgtA [Roseomonas cervicalis ATCC 49957] gi|296267038|gb|EFH12963.1| obg family GTPase CgtA [Roseomonas cervicalis ATCC 49957] Length = 336 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 179/331 (54%), Positives = 234/331 (70%), Gaps = 1/331 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAK+++++GDGG G I+FRREK+IEFGGPDGG+GG+GGD+ + A LNTLID+R Sbjct: 1 MKFLDEAKIWVKAGDGGDGVIAFRREKYIEFGGPDGGNGGKGGDIIVTAVPGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHFKA+ G G +R+GA EDVVL VPVGT + +ED +++ DL + GQR+IL G Sbjct: 61 YAQHFKARKGGNGAGSDRTGAGSEDVVLQVPVGTVILDEDKETVLADLTEAGQRVILCRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNAHFKSSTN+AP A+ G G+E+ IWL+LKLIAD G++GLPNAGKSTFL+ V+ Sbjct: 121 GDGGHGNAHFKSSTNRAPRRADKGYPGEERWIWLRLKLIADAGLVGLPNAGKSTFLSVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL P LG+V+ +EF+LADIPG+I+ AH+GAG+G RFL H ER V Sbjct: 181 AAKPKIADYPFTTLTPQLGVVRLNATEEFVLADIPGLIEGAHEGAGLGTRFLGHVERCAV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ + + AY+ + EL Y L +K EIV L+++D + A + L Sbjct: 241 LLHLIDGSQPDPVGAYETVRAELEGYGGGLSEKPEIVALNKLDAMTPQAKASRVKALERA 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G+ S T G+P +L L D I R Sbjct: 301 LGRPVHLISGATQEGVPTVLRALADTIHRHR 331 >gi|294677818|ref|YP_003578433.1| GTP-binding protein Obg/CgtA [Rhodobacter capsulatus SB 1003] gi|294476638|gb|ADE86026.1| GTP-binding protein Obg/CgtA [Rhodobacter capsulatus SB 1003] Length = 341 Score = 335 bits (858), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 185/335 (55%), Positives = 238/335 (71%), Gaps = 1/335 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG G +SFRREKF+EFGGPDGG GG+GG V+ +A LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGGGGGGCVSFRREKFVEFGGPDGGDGGKGGSVYAEAVEGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF AQ G+ GM +G GED+VL VPVGT++ +ED ++I DL GQR++LA G Sbjct: 61 YQQHFFAQSGQHGMGSQCTGKDGEDIVLKVPVGTEIIDEDEETVIADLTVPGQRVLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN FK++TN+AP +ANPG G E+ +WL+LKLIAD G++GLPNAGKSTFLA+V+ Sbjct: 121 GNGGWGNQRFKTATNRAPAHANPGQEGVERTLWLRLKLIADAGLLGLPNAGKSTFLAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL PNLG+V KEF++ADIPG+I+ A +G G+GD+FL H ER VL Sbjct: 181 NARPKIADYPFTTLVPNLGVVGIDGKEFVMADIPGLIEGASEGRGLGDQFLGHVERCSVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V + Y+ I+ EL AY+ EL +K I L++ D +DS TL+ +K L Sbjct: 241 LHLVDGTSSTITKDYRTIIAELEAYSEELFEKPRITVLNKADALDSKTLSSRKRALEKAS 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIR-GENE 334 S ++ G+ ++L L +I R GE E Sbjct: 301 EGPVLVMSGVSKKGVTEVLRALWAEIEEDRKGEEE 335 >gi|262277916|ref|ZP_06055709.1| Obg family GTPase CgtA [alpha proteobacterium HIMB114] gi|262225019|gb|EEY75478.1| Obg family GTPase CgtA [alpha proteobacterium HIMB114] Length = 323 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 173/322 (53%), Positives = 233/322 (72%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+ +++GDGG G SFR+EKFIEFGGP+GG GG GG V ++A + LNTLID+R Sbjct: 1 MKFLDQAKITVKAGDGGNGCCSFRKEKFIEFGGPNGGDGGNGGSVILEAVNGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHFKAQ GE G N++GA G+D++L VPVGTQV+ ED +L+ DL EG++I +A G Sbjct: 61 YIQHFKAQRGENGKGSNKTGASGDDLILKVPVGTQVYAEDKKTLLYDLVTEGEKIKIATG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN FKSSTNQAP G LG+E IWL+LK+IADIG++G PN+GKS+FL+ T Sbjct: 121 GKGGLGNTRFKSSTNQAPRKTTNGSLGEEFEIWLELKIIADIGLVGFPNSGKSSFLSLTT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RAKPKIADYPFTTL PNLG++ KE ++ADIPG+I+ AHQG G+GD+FLKH ER + Sbjct: 181 RAKPKIADYPFTTLNPNLGVLSIDEKEIVVADIPGLIEGAHQGVGLGDKFLKHIERCKSI 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ A E+N+ Y+ I +EL Y+ EL K EIV L+++D ++ + + +K E Sbjct: 241 LHLIDANEDNLFDRYKIIRNELEKYSPELINKREIVALNKLDLLEDEEIKKKVEEFKKSF 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 + F+ S + + I ++L L Sbjct: 301 TKDFFQISILRKNNIKELLRAL 322 >gi|218513465|ref|ZP_03510305.1| GTPase ObgE [Rhizobium etli 8C-3] Length = 229 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 174/228 (76%), Positives = 196/228 (85%) Query: 4 LDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQ 63 LDEAKVYIRSGDGGAG +SFRREKFIEFGGPDGG GGRGGDVW++ + LNTLIDFRYQQ Sbjct: 1 LDEAKVYIRSGDGGAGSVSFRREKFIEFGGPDGGDGGRGGDVWVETVNGLNTLIDFRYQQ 60 Query: 64 HFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNG 123 HFKA G GM RNR+GA G DV L VPVGTQ+FEED +LICDL EGQR LA GGNG Sbjct: 61 HFKATIGTHGMGRNRTGANGSDVTLKVPVGTQIFEEDRETLICDLTVEGQRYCLAHGGNG 120 Query: 124 GFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAK 183 GFGNAHFK+STNQAP +ANPG+ G+EK IWL+LKLIAD G++GLPNAGKSTFLASVTRA+ Sbjct: 121 GFGNAHFKTSTNQAPDWANPGLPGEEKTIWLRLKLIADAGLVGLPNAGKSTFLASVTRAR 180 Query: 184 PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFL 231 PKIA+YPFTTL+PNLG+ +EFILADIPG+I+ AH+G GIGDRFL Sbjct: 181 PKIANYPFTTLHPNLGVATIDEREFILADIPGLIEGAHEGVGIGDRFL 228 >gi|330994440|ref|ZP_08318365.1| GTPase obg [Gluconacetobacter sp. SXCC-1] gi|329758440|gb|EGG74959.1| GTPase obg [Gluconacetobacter sp. SXCC-1] Length = 347 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 174/327 (53%), Positives = 241/327 (73%), Gaps = 3/327 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+Y++SGDGG G ++FRREK+IEFGGPDGG+GGRGGD+ +A NLNTLIDFR Sbjct: 1 MKFLDQAKIYVKSGDGGDGVVAFRREKYIEFGGPDGGNGGRGGDIVFEAVDNLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHF+A+ G G +R+GA + VV+ VP+GTQ+F+ED +++ DLD G+R++L G Sbjct: 61 YTQHFRARKGGNGAGSDRTGAAAQTVVIKVPIGTQIFDEDRETMLGDLDVAGKRLLLCRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNAHFK+STN+AP A+ G G+E+ +WL+LKLIAD+G++GLPNAGKSTFL++V+ Sbjct: 121 GDGGRGNAHFKTSTNRAPRRADKGWPGEERWVWLRLKLIADVGLVGLPNAGKSTFLSTVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+P LG+V+ +EF++ADIPG+I+ AH+G+G+GDRFL H ER V Sbjct: 181 AARPKIADYPFTTLHPQLGVVRLSVTEEFVIADIPGLIEGAHEGSGLGDRFLGHVERCAV 240 Query: 240 LLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LLH++ +A E V A++ I ELS Y L K EI+ L++ID + + + ++ L Sbjct: 241 LLHLIDGTAEVEEVVGAWRTIRHELSEYGGGLADKPEIIVLNKIDALLPEEIDERRTALE 300 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHD 324 GQ SS+ + +L L D Sbjct: 301 QASGQDVMTMSSVAHMNVDAVLRRLQD 327 >gi|84516138|ref|ZP_01003498.1| GTP-binding protein, GTP1/OBG family [Loktanella vestfoldensis SKA53] gi|84509834|gb|EAQ06291.1| GTP-binding protein, GTP1/OBG family [Loktanella vestfoldensis SKA53] Length = 347 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 179/326 (54%), Positives = 228/326 (69%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GGAG ISFRREKFIE+GGPDGG GG GGDV ++A LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGAGGAGCISFRREKFIEYGGPDGGDGGDGGDVIVEAVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A G+ GM R+G GED +L VPVGT++ +ED ++I DL + GQR+I+A G Sbjct: 61 YQQHFFAGSGQHGMGSQRTGKDGEDKILRVPVGTEIIDEDEETVIADLTEIGQRVIIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN HFK++TNQAP ANPG E+ IWL+LKLIAD+G++G+PNAGKSTFLA+ + Sbjct: 121 GNGGWGNLHFKTATNQAPRRANPGQEAIERTIWLRLKLIADVGLLGMPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PK+ADYPFTTL PNLG+V EF++ADIPG+I A +G G+GD FL H ER VL Sbjct: 181 NARPKVADYPFTTLVPNLGVVGVDDVEFVVADIPGLIAGASEGRGLGDMFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ + I+ EL Y EL K I L++ID +D++ A ++ELA Sbjct: 241 LHLIDGTSGDPAGDLVTIIHELEQYGGELADKPRITVLNKIDALDAEERAFLRDELAEVA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 S ++ GI ++L L +I Sbjct: 301 TGPVMLMSGVSREGITEVLRALRGEI 326 >gi|126729823|ref|ZP_01745636.1| GTP-binding protein, GTP1/OBG family [Sagittula stellata E-37] gi|126709942|gb|EBA08995.1| GTP-binding protein, GTP1/OBG family [Sagittula stellata E-37] Length = 348 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 180/333 (54%), Positives = 234/333 (70%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD KVY+RSG GG G +SFRREKFIEFGGPDGG GG GG VW +A LNTLIDFR Sbjct: 1 MKFLDLCKVYVRSGSGGNGSVSFRREKFIEFGGPDGGDGGTGGSVWAEAVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQH+ AQ+G+ GM R R+G G+D+VL VPVGT++ +ED ++I DL G R++LA G Sbjct: 61 YQQHWFAQNGQGGMGRGRTGKNGDDIVLRVPVGTEIIDEDEETVIADLSTLGDRVLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN FK+STNQAP AN G G E+ +WL+LKLIAD+G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNLRFKTSTNQAPRRANSGQEGIERTLWLRLKLIADVGLVGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+VK EF++ADIPG+I+ AH+G G+GD FL H ER+ VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVKVDNTEFVVADIPGLIEGAHEGRGLGDIFLGHIERSAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ + +Q I DEL AY L K + L++ID +D++ A K+EL Sbjct: 241 LHLIDGTSGTLIEDWQTICDELDAYGEGLSDKPRVTVLNKIDAMDAEERAFLKDELEAAG 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 + S T G+ ++L L + + R + Sbjct: 301 AEDVMLMSGATKEGVTEVLRALRPHVDARRAAD 333 >gi|254437444|ref|ZP_05050938.1| GTP-binding protein Obg/CgtA [Octadecabacter antarcticus 307] gi|198252890|gb|EDY77204.1| GTP-binding protein Obg/CgtA [Octadecabacter antarcticus 307] Length = 344 Score = 326 bits (835), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 173/326 (53%), Positives = 226/326 (69%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD KVYIRSG GG G I+FRREK+IEFGGP+GG GGRGGDV ++A NLNTLIDFR Sbjct: 1 MKFLDLCKVYIRSGTGGGGCIAFRREKYIEFGGPNGGDGGRGGDVIVEAVDNLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++GE G + R+GA G D++L VP GT++ +ED +++ DL + GQ ++LA G Sbjct: 61 YQQHFFAKNGEAGKGQQRTGADGNDILLKVPTGTEIMDEDQETVLIDLAETGQTVVLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN HFK++TNQAP +NPG G E+ +WL+LKLIAD G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNLHFKTATNQAPRRSNPGQDGIERTVWLRLKLIADAGLLGLPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL PNLG+V EF++ADIPG+I+ A G G+GD FL H ER VL Sbjct: 181 NARPKIADYPFTTLIPNLGVVGVDGSEFVVADIPGLIEGASDGKGLGDLFLGHVERCSVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ + Y+ I+ EL Y L K + L++IDT+D++ +E+ Sbjct: 241 LHLIDGTSGDPVGDYKTIIGELEKYGGHLVDKPRVTVLNKIDTLDAEERKFIADEIKAGT 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G + TG G +L L I Sbjct: 301 GVDVMLMAGATGEGTVDVLRALKATI 326 >gi|254454568|ref|ZP_05068005.1| GTP-binding protein Obg/CgtA [Octadecabacter antarcticus 238] gi|198268974|gb|EDY93244.1| GTP-binding protein Obg/CgtA [Octadecabacter antarcticus 238] Length = 344 Score = 325 bits (832), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 172/326 (52%), Positives = 226/326 (69%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD KVYIRSG GG G I+FRREK+IE+GGP+GG GGRGGDV ++A NLNTLIDFR Sbjct: 1 MKFLDLCKVYIRSGTGGGGCIAFRREKYIEYGGPNGGDGGRGGDVIVEAVDNLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++GE G + R+GA G D++L VP GT++ +ED +++ DL + GQ ++LA G Sbjct: 61 YQQHFFAKNGEAGKGQQRTGADGNDILLKVPTGTEIMDEDQETVLIDLAETGQTVVLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN HFKS+TNQAP +NPG G E+ +WL+LKLIAD G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGWGNLHFKSATNQAPRRSNPGQDGIERTVWLRLKLIADAGLLGLPNAGKSTFLAASS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL PNLG+V EF++ADIPG+I+ A G G+GD FL H ER VL Sbjct: 181 NARPKIADYPFTTLIPNLGVVGVDGSEFVVADIPGLIEGASDGKGLGDLFLGHVERCSVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ + Y+ I+ EL Y L K + L+++DT+D++ +E+ Sbjct: 241 LHLIDGTSGDPVGDYKTIIGELEKYGGHLVDKPRVTVLNKVDTLDAEERKFIADEIKAGT 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G + TG G +L L I Sbjct: 301 GVDVMLMAGATGEGTVDVLRALKATI 326 >gi|148259253|ref|YP_001233380.1| GTPase ObgE [Acidiphilium cryptum JF-5] gi|326402407|ref|YP_004282488.1| GTP-binding protein CgtA [Acidiphilium multivorum AIU301] gi|261266641|sp|A5FV29|OBG_ACICJ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|146400934|gb|ABQ29461.1| GTP1/OBG sub domain protein [Acidiphilium cryptum JF-5] gi|325049268|dbj|BAJ79606.1| GTP-binding protein CgtA [Acidiphilium multivorum AIU301] Length = 332 Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 169/321 (52%), Positives = 230/321 (71%), Gaps = 1/321 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+Y+RSGDGG G ++FRREK+IEFGGPDGG+GGRGGD+ +A NLNTLIDFR Sbjct: 1 MKFLDQAKIYVRSGDGGNGVVAFRREKYIEFGGPDGGNGGRGGDIVFEAVENLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHF+A+ G G +R+GA VV+ VPVGTQ+ ++D +L+ DLD G+RI+L G Sbjct: 61 YTQHFRARKGGNGAGSDRTGAAAPPVVIKVPVGTQILDDDRETLLADLDAPGKRIVLLRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNA FK+STN+AP A+PG G+E+ +WL+LKLIAD G++GLPNAGKSTFL+ + Sbjct: 121 GDGGHGNAMFKTSTNRAPRRADPGWPGEERWVWLRLKLIADAGLVGLPNAGKSTFLSVAS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+P LG+V+ +EF+LADIPG+I+ AH GAG+GDRFL H ER Sbjct: 181 AARPKIADYPFTTLHPQLGVVRLSMTEEFVLADIPGLIEGAHDGAGLGDRFLGHVERCAA 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H++ +V A++ I EL AY L K E++ L+++D + +A +++ L Sbjct: 241 LIHLIDGAAGDVVDAWRTIRGELEAYGGGLADKPELIVLNKMDAMTPHQIAGRRSALERA 300 Query: 300 CGQVPFEFSSITGHGIPQILE 320 G S+ G+ +L Sbjct: 301 SGCKVMVISAAAHQGVDAVLR 321 >gi|255263046|ref|ZP_05342388.1| Obg family GTPase CgtA [Thalassiobium sp. R2A62] gi|255105381|gb|EET48055.1| Obg family GTPase CgtA [Thalassiobium sp. R2A62] Length = 346 Score = 322 bits (824), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 187/326 (57%), Positives = 235/326 (72%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG G +SFRREK+IE+GGPDGG GGRGGDV +A LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGGGGGGCVSFRREKYIEYGGPDGGDGGRGGDVVAEAVDGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G GM + R+GA G+D+VL VPVGT++ +ED ++I DL + GQR+ILA G Sbjct: 61 YQQHFFAKNGVPGMGKQRTGADGDDIVLRVPVGTEILDEDEETVIADLTEVGQRVILAGG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HFKS+TNQAP +NPG+ G E+ IWL+LKLIAD G++GLPNAGKSTFLA+ + Sbjct: 121 GNGGFGNLHFKSATNQAPRRSNPGLPGIERTIWLRLKLIADAGLLGLPNAGKSTFLAASS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V EF++ADIPG+I A +G GIGDRFL H ER VL Sbjct: 181 NARPKIADYPFTTLHPNLGVVGVDDTEFVMADIPGLIAGASEGRGIGDRFLGHVERCSVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V E V Y+ I+ EL AY EL K + L++ID + + A K +L C Sbjct: 241 LHLVDGTSETVAEDYRTIIGELEAYGGELAHKPRVTALNKIDALADEERAEAKADLEEAC 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G S ++ G+ +L + +I Sbjct: 301 GAPVLMMSGVSREGLIDVLRAVRGQI 326 >gi|126736802|ref|ZP_01752539.1| GTP-binding protein, GTP1/OBG family [Roseobacter sp. CCS2] gi|126713703|gb|EBA10577.1| GTP-binding protein, GTP1/OBG family [Roseobacter sp. CCS2] Length = 349 Score = 322 bits (824), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 175/326 (53%), Positives = 228/326 (69%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG G ISFRREKF+E+GGPDGG GG+GGDV ++A LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGAGGGGCISFRREKFMEYGGPDGGDGGKGGDVVVEAVEGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A +G+ GM R+G GE VL VPVGT++ +ED ++I DL + GQ+I++A G Sbjct: 61 YQQHFFAGNGQHGMGSQRTGKDGEAKVLRVPVGTEIIDEDEETIIADLTEVGQKIVIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG+GN FK++TNQAP +NPG E+ IWL+LKLIAD+G++G+PNAGKSTFLA+ + Sbjct: 121 GNGGWGNLRFKTATNQAPRRSNPGQEAIERTIWLRLKLIADVGLLGMPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PK+ADYPFTTL PNLG+V EF++ADIPG+I+ A +G G+GD FL H ER VL Sbjct: 181 NARPKVADYPFTTLIPNLGVVGIDDVEFVVADIPGLIEGASEGRGLGDMFLGHVERCAVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ + I+ EL AY EL K I L++IDT+D + ++E+A Sbjct: 241 LHLIDGTSGDPAGDLTTIIAELEAYGGELADKPRITVLNKIDTLDDEEREFLRDEIAAVA 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 S ++ GIP +L L +I Sbjct: 301 NGPVMMMSGVSREGIPDVLRALRSEI 326 >gi|56551103|ref|YP_161942.1| GTPase ObgE [Zymomonas mobilis subsp. mobilis ZM4] gi|81820937|sp|Q5NR23|OBG_ZYMMO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|56542677|gb|AAV88831.1| GTP-binding protein Obg/CgtA [Zymomonas mobilis subsp. mobilis ZM4] Length = 347 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 168/322 (52%), Positives = 227/322 (70%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+FLD+AK+Y+RSG GG G +SFR EK+IE+GGPDGG+GG+GGD+ +A LNTLIDFR Sbjct: 1 MQFLDQAKIYLRSGAGGPGAVSFRHEKYIEYGGPDGGNGGKGGDIVFEAVPGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHF+A G G N++GA +D+V+ VPVGTQV ED ++ D + G+RII G Sbjct: 61 YTQHFRAARGASGAGSNKTGAGAKDLVIHVPVGTQVLSEDKEEILHDFTKVGERIIFLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNA +KSSTN+AP PG QE +WL+LKL+AD+G++GLPNAGKSTFL + T Sbjct: 121 GDGGRGNASYKSSTNRAPRQHGPGWPAQEAWVWLRLKLLADVGLVGLPNAGKSTFLKATT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PKI +YPFTTL+P LG+V+ +EF+LADIPG+I+ A +G GIGDRFL H ER +L Sbjct: 181 NAHPKIGNYPFTTLHPQLGVVRRHGQEFVLADIPGLIEGASEGIGIGDRFLGHIERCRIL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ A E+ AA+ + +EL+ Y + L +K +++ L++ID+VD +T A L Sbjct: 241 LHLIDASGEDPIAAWHEVQNELALYGAGLAEKPQLLALNKIDSVDEETCAELSQALEEAS 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 GQ S TG G+ IL+ L Sbjct: 301 GQKVLLLSGATGQGLDPILDQL 322 >gi|241761325|ref|ZP_04759413.1| GTP-binding protein Obg/CgtA [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374232|gb|EER63729.1| GTP-binding protein Obg/CgtA [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 347 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 168/322 (52%), Positives = 227/322 (70%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+FLD+AK+Y+RSG GG G +SFR EK+IE+GGPDGG+GG+GGD+ +A LNTLIDFR Sbjct: 1 MQFLDQAKIYLRSGAGGPGAVSFRHEKYIEYGGPDGGNGGKGGDIVFEAVPGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHF+A G G N++GA +D+V+ VPVGTQV ED ++ D + G+RII G Sbjct: 61 YTQHFRAARGASGAGSNKTGAGAKDLVIHVPVGTQVLSEDKEEILHDFTKVGERIIFLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNA +KSSTN+AP PG QE +WL+LKL+AD+G++GLPNAGKSTFL + T Sbjct: 121 GDGGRGNASYKSSTNRAPRQHGPGWPAQEAWVWLRLKLLADVGLVGLPNAGKSTFLKATT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PKI +YPFTTL+P LG+V+ +EF+LADIPG+I+ A +G GIGDRFL H ER +L Sbjct: 181 NAHPKIGNYPFTTLHPQLGVVRRHGQEFVLADIPGLIEGASEGIGIGDRFLGHIERCRIL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ A E+ AA+ + +EL+ Y + L +K +++ L++ID+VD +T A L Sbjct: 241 LHLIDASGEDPIAAWNEVQNELALYGAGLAEKPQLLALNKIDSVDEETCAELSQALEEAS 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 GQ S TG G+ IL+ L Sbjct: 301 GQKVLLLSGATGQGLDPILDQL 322 >gi|260753240|ref|YP_003226133.1| GTPase ObgE [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552603|gb|ACV75549.1| GTP-binding protein Obg/CgtA [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 347 Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 168/322 (52%), Positives = 226/322 (70%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+FLD+AK+Y+RSG GG G +SFR EK+IE+GGPDGG+GG+GGD+ +A LNTLIDFR Sbjct: 1 MQFLDQAKIYLRSGAGGPGAVSFRHEKYIEYGGPDGGNGGKGGDIVFEAVPGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHF+A G G N++GA +D+V+ VPVGTQV ED ++ D + G+RII G Sbjct: 61 YTQHFRAARGASGAGSNKTGAGAKDLVIHVPVGTQVLSEDKEEILHDFTKVGERIIFLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNA +KSSTN+AP PG QE +WL+LKL+AD+G++GLPNAGKSTFL + T Sbjct: 121 GDGGRGNASYKSSTNRAPRQHGPGWPAQEAWVWLRLKLLADVGLVGLPNAGKSTFLKATT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PKI YPFTTL+P LG+V+ +EF+LADIPG+I+ A +G GIGDRFL H ER +L Sbjct: 181 NAHPKIGSYPFTTLHPQLGVVRRHGQEFVLADIPGLIEGASEGIGIGDRFLGHIERCRIL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ A E+ AA+ + +EL+ Y + L +K +++ L++ID+VD +T A L Sbjct: 241 LHLIDASGEDPIAAWNEVQNELALYGAGLAEKPQLLALNKIDSVDEETCAELSQALEEAS 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 GQ S TG G+ IL+ L Sbjct: 301 GQKVLLLSGATGQGLDPILDQL 322 >gi|103487190|ref|YP_616751.1| GTPase ObgE [Sphingopyxis alaskensis RB2256] gi|123253193|sp|Q1GSF4|OBG_SPHAL RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|98977267|gb|ABF53418.1| Small GTP-binding protein domain [Sphingopyxis alaskensis RB2256] Length = 348 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 169/327 (51%), Positives = 232/327 (70%), Gaps = 1/327 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M FLD+AK++I+SGDGG G +SFRREK+IE+GGPDGG+GG+GGD+ +A + LNTLIDFR Sbjct: 1 MHFLDQAKIFIKSGDGGPGAVSFRREKYIEYGGPDGGNGGKGGDIVFEAVAGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDG-ISLICDLDQEGQRIILAP 119 Y QHFKA+ G G R+R+GA G D+V+ VPVGTQ+ +D +L+ DL + G+R+ Sbjct: 61 YTQHFKAKRGTPGAGRDRTGAGGPDLVIQVPVGTQILADDEERTLLADLTKAGERVHFLR 120 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG+GG GNA +K+STN+AP PG G+E +WL+LKL+AD G++GLPNAGKSTF+ +V Sbjct: 121 GGDGGRGNASYKTSTNRAPRQHGPGWPGEEMWVWLRLKLLADAGLVGLPNAGKSTFINAV 180 Query: 180 TRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 T A+ K+ Y FTTL P LG+V EF++ADIPG+I+ A +GAG+GDRFL H ER V Sbjct: 181 TNAQAKVGAYAFTTLRPQLGVVSHKGHEFVIADIPGLIEGAAEGAGVGDRFLGHIERCRV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH+V A + +V +Y+ + DEL AY ++L K IV L++IDT+D + +A EL + Sbjct: 241 LLHLVDANDADVATSYRVVRDELEAYGADLIDKPVIVALNKIDTLDDELIAALSAELEAE 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKI 326 G S +G GI +L+ L + I Sbjct: 301 SGHPVMALSGASGAGIEPVLDKLLEAI 327 >gi|148556796|ref|YP_001264378.1| GTPase ObgE [Sphingomonas wittichii RW1] gi|261263094|sp|A5VD74|OBG_SPHWW RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|148501986|gb|ABQ70240.1| GTP-binding protein Obg/CgtA [Sphingomonas wittichii RW1] Length = 345 Score = 315 bits (806), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 170/331 (51%), Positives = 225/331 (67%), Gaps = 4/331 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M FLD+AK++IRSG GG G +SFRREKFIE+GGPDGG GG+GGD+ +A LNTLIDFR Sbjct: 1 MHFLDQAKIFIRSGAGGPGAVSFRREKFIEYGGPDGGHGGKGGDIIFEAVPGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHFKAQ G G NR+GA GED+++ VPVGTQ+ ED ++ D GQR + G Sbjct: 61 YTQHFKAQRGHGGAGSNRTGAGGEDLLIKVPVGTQILSEDREQVLADFTVPGQRQVFLRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNA +K+STN+AP G +E +WL+LKL+AD G++GLPNAGKSTF+ +V+ Sbjct: 121 GDGGRGNASYKTSTNRAPRQHGTGWPAEEMWVWLRLKLLADCGLVGLPNAGKSTFINAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AK K+ YPFTT+ P LG+ +EF++ADIPG+I+ A +GAGIGDRFL H ER VL Sbjct: 181 NAKAKVGAYPFTTIRPQLGVATHKGREFVVADIPGLIEGAAEGAGIGDRFLGHIERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V A ++ AY+ + EL AY + L K +++ L++ID VD+ TL + +LA Sbjct: 241 LHLVDASGDDPVGAYEIVRGELDAYGAGLADKPQVLALNKIDAVDAKTLDKLAKKLAKLG 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 G S +G G+P +L DKI I G Sbjct: 301 GGEVMRLSGASGEGLPAVL----DKIIEILG 327 >gi|254456327|ref|ZP_05069756.1| GTP-binding protein Obg/CgtA [Candidatus Pelagibacter sp. HTCC7211] gi|207083329|gb|EDZ60755.1| GTP-binding protein Obg/CgtA [Candidatus Pelagibacter sp. HTCC7211] Length = 327 Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 158/289 (54%), Positives = 214/289 (74%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+ K+Y+++GDGG G SFRREK++E+GGPDGG GG+GG + ++A NLNTLID+R Sbjct: 1 MKFLDQVKIYVKAGDGGDGSPSFRREKYVEYGGPDGGDGGKGGSIILKAEENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQH KAQ GE G +NR+G G D++L VP+GTQVFEED +LI D +++G+ + A G Sbjct: 61 YQQHHKAQRGENGAGQNRTGKGGNDLILKVPLGTQVFEEDNKTLIYDFNKKGEEFVAAIG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN FKSSTN+AP G +G+E IWL+LK IADIGIIGLPNAGKS+ L+ +T Sbjct: 121 GKGGLGNTRFKSSTNRAPRKFTKGTIGEEFTIWLQLKTIADIGIIGLPNAGKSSLLSVIT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PKIA+Y FTTL PNLG+ KE +ADIPG+++ AH+G G+G +FLKH ER L Sbjct: 181 NANPKIANYRFTTLNPNLGVASYDDKEITIADIPGLVEGAHEGVGLGIQFLKHIERCKSL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 LH++ ++ +Y+ + +EL Y+S+L +K E+V L++ID +D DT+ Sbjct: 241 LHLIDITNLDLNESYKQVKNELKNYSSKLMEKKELVVLNKIDLIDEDTV 289 >gi|310814927|ref|YP_003962891.1| GTP-binding protein, GTP1/OBG family [Ketogulonicigenium vulgare Y25] gi|308753662|gb|ADO41591.1| GTP-binding protein, GTP1/OBG family [Ketogulonicigenium vulgare Y25] Length = 350 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 179/330 (54%), Positives = 234/330 (70%), Gaps = 4/330 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD AKVYIRSG GG G +SFRR+KF+E+GGPDGG GG+GGDV I+A LNTLIDFR Sbjct: 1 MKFLDLAKVYIRSGAGGNGCVSFRRDKFVEYGGPDGGDGGKGGDVIIEAVEGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G+ GM R+GA G D++L VPVGT++ +ED +LI DL + GQRI +A G Sbjct: 61 YQQHFFAKNGQPGMGSQRTGAHGADIILRVPVGTEIIDEDEETLIADLSEVGQRITVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN FK+STNQAP ANPG E+ +WL+LKLIAD G++G+PNAGKSTFLA+ + Sbjct: 121 GNGGFGNLFFKTSTNQAPRRANPGQPAIERTLWLRLKLIADAGLLGMPNAGKSTFLAATS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL PNLG+V EF++ADIPG+I+ A +G G+GD+FL H ER VL Sbjct: 181 NARPKIADYPFTTLVPNLGVVGVDDVEFVMADIPGLIEGASEGRGLGDQFLAHVERCSVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAY----NSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LH+V E+ + Y I++EL+ Y +S+L + I L++ID +D + A + E+ Sbjct: 241 LHLVDGTSEDPVSDYHTIIEELTNYSEDLDSDLINRPRITALNKIDALDEEERAALQAEM 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 G S +T G+ +L L +I Sbjct: 301 EEAVGGPVMLMSGVTREGVVDVLRALRAEI 330 >gi|85373198|ref|YP_457260.1| GTPase ObgE [Erythrobacter litoralis HTCC2594] gi|122545193|sp|Q2NCX8|OBG_ERYLH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|84786281|gb|ABC62463.1| predicted GTPase [Erythrobacter litoralis HTCC2594] Length = 352 Score = 308 bits (789), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 164/322 (50%), Positives = 219/322 (68%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M FLD+AK+Y++SG GG G +SFRREK+IE+GGPDGG+GG+GGD+ +A LNTLIDFR Sbjct: 1 MHFLDQAKIYLKSGAGGPGAVSFRREKYIEYGGPDGGNGGKGGDIVFEAVQGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHFKA+ G G ++R+GA D+V+ VPVGTQV ED ++ D + GQR+ G Sbjct: 61 YAQHFKAKRGAHGQGKDRTGAGAPDLVIKVPVGTQVLSEDKEEVLADFTEVGQRVTFLAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA +KSSTN+AP PG G+E +WL+LKL+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GMGGRGNASYKSSTNRAPRQHQPGQAGEEMWVWLRLKLLADVGLLGLPNAGKSTFINAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AK K+ Y FTTL P LG+V +EF+LADIPG+I+ A +GAGIGDRFL H ER VL Sbjct: 181 NAKAKVGHYAFTTLVPKLGVVNHKGREFVLADIPGLIEGAAEGAGIGDRFLGHIERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H+V E+ A+Q + EL AY L K ++V L+++D D + +A EL Sbjct: 241 IHLVDISGEDPAEAFQTVNAELEAYGEGLEDKPQLVALNKLDLADEELVAGFAEELLEAG 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 F S TG GI +L+ + Sbjct: 301 ADEVFAVSGATGAGIEPLLDAV 322 >gi|149185863|ref|ZP_01864178.1| predicted GTPase [Erythrobacter sp. SD-21] gi|148830424|gb|EDL48860.1| predicted GTPase [Erythrobacter sp. SD-21] Length = 351 Score = 308 bits (788), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 164/322 (50%), Positives = 220/322 (68%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M FLD+AK+Y++SG GG G +SFRREK+IE+GGPDGG+GGRGGD+ +A LNTLIDFR Sbjct: 1 MHFLDQAKIYLKSGAGGPGAVSFRREKYIEYGGPDGGNGGRGGDIVFRAVQGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHFKA+ G G ++++GA D+V+ VPVGTQV ED ++ D + GQ I+ G Sbjct: 61 YAQHFKAKRGMHGQGKDKTGAGAPDLVIDVPVGTQVLSEDKEEVLADFTEVGQEIVFLEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA +KSSTN+AP PGI G+E +WL+LKL+AD+G++GLPNAGKSTF+ VT Sbjct: 121 GMGGRGNASYKSSTNRAPRQHQPGIPGEEMWVWLRLKLLADVGLLGLPNAGKSTFINQVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AK K+ DY FTTL P LG+V+ +EF+LADIPG+I+ A GAGIGDRFL H ER VL Sbjct: 181 NAKAKVGDYAFTTLVPKLGVVRHKGREFVLADIPGLIEGAADGAGIGDRFLGHIERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ ++ AYQ + EL AY + L K ++V L+++D D + EL Sbjct: 241 IHLIDIAGQDPADAYQTVNAELEAYGAGLSDKPQLVALNKLDLADKELGEAFGEELLAAG 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 F S TG GI ++++ + Sbjct: 301 ADKVFAISGATGAGIEELIDAV 322 >gi|330813473|ref|YP_004357712.1| GTP-binding protein Obg [Candidatus Pelagibacter sp. IMCC9063] gi|327486568|gb|AEA80973.1| GTP-binding protein Obg [Candidatus Pelagibacter sp. IMCC9063] Length = 322 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 168/322 (52%), Positives = 227/322 (70%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+Y+++G+GG+G SFRREKF+EFGGP+GG GG GG + +++ + LNTLIDFR Sbjct: 1 MKFLDQAKIYVKAGNGGSGLSSFRREKFVEFGGPNGGDGGSGGSIILKSVNGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHFKA +GEKG N++G G++++L VP+GTQV+ ED +LI D +E + ILA G Sbjct: 61 YAQHFKAGNGEKGGSSNKTGHGGKNLILRVPLGTQVYAEDKKTLIYDFTKEDEEFILAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN FKSSTN+AP G LG+E IWL+LK+IAD+G+IG PNAGKS+FL T Sbjct: 121 GFGGVGNTKFKSSTNRAPRKFTKGKLGEEISIWLELKIIADVGLIGFPNAGKSSFLNIST 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIA+YPFTT+ PNLG+V+ KE +LADIPG+I+ AH+G G+GD+FLKH ER L Sbjct: 181 RARPKIANYPFTTINPNLGVVQIDDKEIVLADIPGLIEGAHKGIGLGDKFLKHIERCKSL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LHI+ E+++ Y+ I +EL Y+ +L KK EIV ++ID ++ K E Sbjct: 241 LHIIDINEDDLIRQYKVIREELKQYSEKLIKKKEIVVFNKIDLLEEKEKNEKLKEFKKFF 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 + +E S + I IL L Sbjct: 301 KKKFYEISILKKENINTILRIL 322 >gi|157964992|ref|YP_001499816.1| GTPase ObgE [Rickettsia massiliae MTU5] gi|157844768|gb|ABV85269.1| GTP-binding protein [Rickettsia massiliae MTU5] Length = 366 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 161/320 (50%), Positives = 223/320 (69%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+YI+ G+GG G +SF REKFI+ GGPDGG GGRGG V ++ +LNTL+++R Sbjct: 37 MHFIDEVKIYIKGGNGGNGCVSFHREKFIDRGGPDGGDGGRGGSVIFRSNHHLNTLVNYR 96 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHF A++GE G NRSG G+ +VL VP+GTQ+F EDG L+ D + Q + G Sbjct: 97 YKQHFTAENGENGKDSNRSGKSGKSLVLDVPIGTQIFSEDGNILLHDFTVDDQSFEIIKG 156 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN+HFKSS NQAP G + +E I L LKL++D+G++G PNAGKSTFL+ VT Sbjct: 157 GSGGLGNSHFKSSVNQAPRKRTEGEIAEEMWIHLSLKLLSDVGLVGFPNAGKSTFLSFVT 216 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+V +EF++ADIPG+I+ AHQG G+GD+FLKH ER +VL Sbjct: 217 AAKPKIADYPFTTLVPNLGVVYVDDEEFVIADIPGLIEGAHQGHGLGDKFLKHIERCNVL 276 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ +V A Y + EL +Y+ L+ KIEI+ L++ D + + + K N+L Sbjct: 277 IHLIDGSSNDVVADYNTVRLELESYSDYLKNKIEIICLNKCDVLTDEEIQEKINKLQKVT 336 Query: 301 GQVPFEFSSITGHGIPQILE 320 + F S+ T G+ +I++ Sbjct: 337 NKEVFPISTYTNAGVNKIVK 356 >gi|71082927|ref|YP_265646.1| GTPase ObgE [Candidatus Pelagibacter ubique HTCC1062] gi|91762649|ref|ZP_01264614.1| GTP-binding protein [Candidatus Pelagibacter ubique HTCC1002] gi|123647334|sp|Q4FP46|OBG_PELUB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|71062040|gb|AAZ21043.1| GTP-binding protein [Candidatus Pelagibacter ubique HTCC1062] gi|91718451|gb|EAS85101.1| GTP-binding protein [Candidatus Pelagibacter ubique HTCC1002] Length = 327 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 154/287 (53%), Positives = 214/287 (74%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+ K+Y+++G+GG G SFRREKFIE+GGPDGG GG+GG +++++ NLNTLID+R Sbjct: 1 MKFLDQVKIYVKAGNGGHGSPSFRREKFIEYGGPDGGDGGKGGTIYLRSERNLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +QQH KA G G +NR+G GED++L VP+GTQVFEED +LI D +EG+ I+A G Sbjct: 61 FQQHHKAGRGVNGSGQNRTGHSGEDLILKVPIGTQVFEEDNKTLIYDFKKEGEEFIVANG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN FKSSTN+AP G G+E +IWL+LK IAD+GI+GLPNAGKS+ LAS+T Sbjct: 121 GKGGLGNTRFKSSTNRAPKKFTKGAPGEEYVIWLQLKTIADVGIVGLPNAGKSSLLASIT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PKIA+Y FTTL PNLG+ KE LADIPG+++ AH+G G+G +FLKH ER L Sbjct: 181 NAMPKIANYKFTTLNPNLGVASYDDKEITLADIPGLVEGAHEGVGLGIQFLKHIERCKTL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 +H++ +E+++ Y+ + +EL +Y+ +L +K EI+ L++ D ++ + Sbjct: 241 MHLIDITDEDLENTYKQVRNELGSYSKDLLEKKEIIVLNKTDLLEEE 287 >gi|34581102|ref|ZP_00142582.1| GTP-binding protein [Rickettsia sibirica 246] gi|28262487|gb|EAA25991.1| GTP-binding protein [Rickettsia sibirica 246] Length = 348 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 162/320 (50%), Positives = 222/320 (69%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+YI+ G+GG G +SF REKFI+ GGPDGG GGRGG V ++ +LNTL+++R Sbjct: 19 MHFIDEVKIYIKGGNGGNGCVSFHREKFIDRGGPDGGDGGRGGSVIFRSNHHLNTLVNYR 78 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHF A++GE G NRSG G+ +VL VP+GTQ+F EDG L D + Q + G Sbjct: 79 YKQHFTAENGENGKDSNRSGKSGKSLVLDVPIGTQIFSEDGNILFYDFTVDDQSFEIIKG 138 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN+HFKSS NQAP G + +E I L LKL++D+G++GLPNAGKSTFL+ VT Sbjct: 139 GSGGLGNSHFKSSVNQAPRKRTEGEIAEEMWIHLSLKLLSDVGLVGLPNAGKSTFLSVVT 198 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+V +EF++ADIPG+I+ AHQG G+GD+FLKH ER +VL Sbjct: 199 AAKPKIADYPFTTLVPNLGVVYVDDEEFVIADIPGLIEGAHQGHGLGDKFLKHIERCNVL 258 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ +V A Y + EL Y+ L+ KIEI+ L++ D + + + K N+L Sbjct: 259 IHLIDGSSNDVVADYNTVRLELELYSDYLKNKIEIICLNKCDVLTDEEIQEKINKLQKVT 318 Query: 301 GQVPFEFSSITGHGIPQILE 320 + F S+ T G+ +I++ Sbjct: 319 NKEIFPISTCTNAGVNKIVK 338 >gi|165933868|ref|YP_001650657.1| GTPase CgtA [Rickettsia rickettsii str. Iowa] gi|165908955|gb|ABY73251.1| GTP-binding protein (probably involved in DNA repair) [Rickettsia rickettsii str. Iowa] Length = 362 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 161/320 (50%), Positives = 222/320 (69%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+YI+ G+GG G +SF REKFI+ GGPDGG GGRGG V ++ +LNTL+++R Sbjct: 33 MHFIDEVKIYIKGGNGGNGCVSFHREKFIDRGGPDGGDGGRGGSVIFRSNHHLNTLVNYR 92 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHF A++GE G NRSG G+ +VL VP+GTQ+F EDG L D + Q + G Sbjct: 93 YKQHFTAENGENGKDSNRSGKSGKSLVLDVPIGTQIFSEDGNILFYDFTVDDQSFEIIKG 152 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN+HFKSS NQAP G + +E I L LKL++D+G++GLPNAGKSTFL+ VT Sbjct: 153 GSGGLGNSHFKSSVNQAPRKRTEGEIAEEMWIHLSLKLLSDVGLVGLPNAGKSTFLSVVT 212 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+V +EF++ADIPG+I+ AHQG G+GD+FLKH ER +VL Sbjct: 213 AAKPKIADYPFTTLVPNLGVVYVDDEEFVIADIPGLIEGAHQGHGLGDKFLKHIERCNVL 272 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ +V A Y + EL +Y+ L+ KIE + L++ D + + + K N+L Sbjct: 273 IHLIDGSSNDVVADYNTVRLELESYSDYLKNKIETICLNKCDVLTDEEIQEKINKLQKVT 332 Query: 301 GQVPFEFSSITGHGIPQILE 320 + F S+ T G+ +I++ Sbjct: 333 NKEVFPISTCTNAGVNKIVK 352 >gi|261277906|sp|A8F2Y3|OBG_RICM5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 330 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 161/320 (50%), Positives = 223/320 (69%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+YI+ G+GG G +SF REKFI+ GGPDGG GGRGG V ++ +LNTL+++R Sbjct: 1 MHFIDEVKIYIKGGNGGNGCVSFHREKFIDRGGPDGGDGGRGGSVIFRSNHHLNTLVNYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHF A++GE G NRSG G+ +VL VP+GTQ+F EDG L+ D + Q + G Sbjct: 61 YKQHFTAENGENGKDSNRSGKSGKSLVLDVPIGTQIFSEDGNILLHDFTVDDQSFEIIKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN+HFKSS NQAP G + +E I L LKL++D+G++G PNAGKSTFL+ VT Sbjct: 121 GSGGLGNSHFKSSVNQAPRKRTEGEIAEEMWIHLSLKLLSDVGLVGFPNAGKSTFLSFVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+V +EF++ADIPG+I+ AHQG G+GD+FLKH ER +VL Sbjct: 181 AAKPKIADYPFTTLVPNLGVVYVDDEEFVIADIPGLIEGAHQGHGLGDKFLKHIERCNVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ +V A Y + EL +Y+ L+ KIEI+ L++ D + + + K N+L Sbjct: 241 IHLIDGSSNDVVADYNTVRLELESYSDYLKNKIEIICLNKCDVLTDEEIQEKINKLQKVT 300 Query: 301 GQVPFEFSSITGHGIPQILE 320 + F S+ T G+ +I++ Sbjct: 301 NKEVFPISTYTNAGVNKIVK 320 >gi|238651088|ref|YP_002916946.1| GTPase ObgE [Rickettsia peacockii str. Rustic] gi|261277904|sp|B0BVJ1|OBG_RICRO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277905|sp|A8GTZ9|OBG_RICRS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|238625186|gb|ACR47892.1| GTPase ObgE [Rickettsia peacockii str. Rustic] Length = 330 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 161/320 (50%), Positives = 222/320 (69%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+YI+ G+GG G +SF REKFI+ GGPDGG GGRGG V ++ +LNTL+++R Sbjct: 1 MHFIDEVKIYIKGGNGGNGCVSFHREKFIDRGGPDGGDGGRGGSVIFRSNHHLNTLVNYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHF A++GE G NRSG G+ +VL VP+GTQ+F EDG L D + Q + G Sbjct: 61 YKQHFTAENGENGKDSNRSGKSGKSLVLDVPIGTQIFSEDGNILFYDFTVDDQSFEIIKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN+HFKSS NQAP G + +E I L LKL++D+G++GLPNAGKSTFL+ VT Sbjct: 121 GSGGLGNSHFKSSVNQAPRKRTEGEIAEEMWIHLSLKLLSDVGLVGLPNAGKSTFLSVVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+V +EF++ADIPG+I+ AHQG G+GD+FLKH ER +VL Sbjct: 181 AAKPKIADYPFTTLVPNLGVVYVDDEEFVIADIPGLIEGAHQGHGLGDKFLKHIERCNVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ +V A Y + EL +Y+ L+ KIE + L++ D + + + K N+L Sbjct: 241 IHLIDGSSNDVVADYNTVRLELESYSDYLKNKIETICLNKCDVLTDEEIQEKINKLQKVT 300 Query: 301 GQVPFEFSSITGHGIPQILE 320 + F S+ T G+ +I++ Sbjct: 301 NKEVFPISTCTNAGVNKIVK 320 >gi|157829140|ref|YP_001495382.1| GTPase ObgE [Rickettsia rickettsii str. 'Sheila Smith'] gi|157801621|gb|ABV76874.1| GTPase ObgE [Rickettsia rickettsii str. 'Sheila Smith'] Length = 348 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 161/320 (50%), Positives = 222/320 (69%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+YI+ G+GG G +SF REKFI+ GGPDGG GGRGG V ++ +LNTL+++R Sbjct: 19 MHFIDEVKIYIKGGNGGNGCVSFHREKFIDRGGPDGGDGGRGGSVIFRSNHHLNTLVNYR 78 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHF A++GE G NRSG G+ +VL VP+GTQ+F EDG L D + Q + G Sbjct: 79 YKQHFTAENGENGKDSNRSGKSGKSLVLDVPIGTQIFSEDGNILFYDFTVDDQSFEIIKG 138 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN+HFKSS NQAP G + +E I L LKL++D+G++GLPNAGKSTFL+ VT Sbjct: 139 GSGGLGNSHFKSSVNQAPRKRTEGEIAEEMWIHLSLKLLSDVGLVGLPNAGKSTFLSVVT 198 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+V +EF++ADIPG+I+ AHQG G+GD+FLKH ER +VL Sbjct: 199 AAKPKIADYPFTTLVPNLGVVYVDDEEFVIADIPGLIEGAHQGHGLGDKFLKHIERCNVL 258 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ +V A Y + EL +Y+ L+ KIE + L++ D + + + K N+L Sbjct: 259 IHLIDGSSNDVVADYNTVRLELESYSDYLKNKIETICLNKCDVLTDEEIQEKINKLQKVT 318 Query: 301 GQVPFEFSSITGHGIPQILE 320 + F S+ T G+ +I++ Sbjct: 319 NKEVFPISTCTNAGVNKIVK 338 >gi|67459729|ref|YP_247353.1| GTPase ObgE [Rickettsia felis URRWXCal2] gi|75535880|sp|Q4UJV1|OBG_RICFE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|67005262|gb|AAY62188.1| GTP-binding protein [Rickettsia felis URRWXCal2] Length = 330 Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 160/320 (50%), Positives = 223/320 (69%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+ I+ G+GG G +SF REKFI+ GGPDGG GGRGG V ++ +LNTL+++R Sbjct: 1 MNFIDEVKICIKGGNGGNGCVSFHREKFIDRGGPDGGDGGRGGSVIFRSNHHLNTLVNYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHF A++GE G NRSG G+ + L VP+GTQ+F EDG L+ D ++ Q + G Sbjct: 61 YKQHFTAENGENGKGSNRSGKSGKSLALDVPIGTQIFSEDGNILLHDFTEDDQSFEIIKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN+HFK+S NQAP G + +E I L LKL++D+G++GLPNAGKSTFL+ VT Sbjct: 121 GSGGLGNSHFKTSVNQAPRKRTEGEIAEEMWIHLSLKLLSDVGLVGLPNAGKSTFLSVVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+V +EF++ADIPG+I+ AHQG G+GD+FLKH ER +VL Sbjct: 181 AAKPKIADYPFTTLVPNLGVVYVDDEEFVIADIPGLIEGAHQGHGLGDKFLKHIERCNVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ +V A Y + EL +Y+ L+ KIEI+ L++ D + + + K NEL Sbjct: 241 IHLIDGSSNDVMADYNTVRLELESYSDYLKNKIEIICLNKCDVLTDEEIQEKINELQKAT 300 Query: 301 GQVPFEFSSITGHGIPQILE 320 + F S+ T G+ +I++ Sbjct: 301 NKEVFPISTYTNLGVNKIVK 320 >gi|296284486|ref|ZP_06862484.1| GTPase ObgE [Citromicrobium bathyomarinum JL354] Length = 364 Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 162/322 (50%), Positives = 219/322 (68%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M FLD+AKVY++SG GG G +SFRREK+I++GGPDGG+GG+GGDV A + LNTLIDFR Sbjct: 1 MHFLDQAKVYLKSGAGGPGAVSFRREKYIQYGGPDGGNGGKGGDVVFVAVAGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHFKA G GM R+R+GA +D+V+ VPVGTQV ED ++ D + GQRI L G Sbjct: 61 YAQHFKASRGGHGMGRDRTGAGADDLVVEVPVGTQVLSEDKEEILADFTEVGQRITLLHG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA +K+STN+AP PG G+E +WL+LKL+AD+G++GLPNAGKSTF+ VT Sbjct: 121 GMGGRGNASYKTSTNRAPRQHQPGEPGEEMWVWLRLKLLADVGLVGLPNAGKSTFINQVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 + K+ DY FTTL P LG+V+ ++F+LADIPG+I+ A +GAGIGDRFL H ER VL Sbjct: 181 NTRAKVGDYAFTTLVPKLGVVRHKGRDFVLADIPGLIEGAAEGAGIGDRFLGHIERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ ++ A + + EL AY + L K IV L+++D D + +EL Sbjct: 241 IHLIDIAGDDPAEAMRTVEAELEAYGAGLEDKPRIVALNKLDLADGELAEAFGDELKAAG 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 + S TG G+ +L+ + Sbjct: 301 ADAVYPVSGATGAGVEALLDAV 322 >gi|332187064|ref|ZP_08388804.1| obg family GTPase CgtA [Sphingomonas sp. S17] gi|332012764|gb|EGI54829.1| obg family GTPase CgtA [Sphingomonas sp. S17] Length = 348 Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 162/326 (49%), Positives = 222/326 (68%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M FLD+AK+++RSG GG G +SFRREK+IE+GGPDGG+GG+GGD+ +A + LNTLIDFR Sbjct: 1 MHFLDQAKIFVRSGAGGPGAVSFRREKYIEYGGPDGGNGGKGGDIIFEAVAGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHF+A G G NR+G G+D+V+ VPVGTQ+ ED ++ D + GQR + G Sbjct: 61 YTQHFRAPRGHGGSGSNRTGGGGDDLVIKVPVGTQILSEDKEEVLLDFTKVGQREVFLRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNA +K+STN+AP G +E +WL+LKL+AD G++GLPNAGKSTF+ +VT Sbjct: 121 GDGGRGNASYKTSTNRAPRQHGTGWPSEEAWVWLRLKLLADAGLVGLPNAGKSTFINAVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+ K+ Y FTT P LG+V+ +EF++ADIPG+I+ A GAGIGDRFL H ER VL Sbjct: 181 NAQAKVGAYAFTTTRPQLGVVRHHNREFVVADIPGLIEGAADGAGIGDRFLGHIERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH+V A + +V +Y+ + DEL AY + L K I+ L++IDT+D + + ELA Sbjct: 241 LHLVDANDSDVAESYRIVRDELEAYGAGLIDKPHIIALNKIDTLDDELIEALSAELAEAS 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G S G G+ +L+ L + I Sbjct: 301 GADVIPLSGAAGTGVDWVLDKLLEAI 326 >gi|161723839|ref|NP_360944.2| GTPase ObgE [Rickettsia conorii str. Malish 7] gi|261277910|sp|Q92G19|OBG_RICCN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 330 Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 161/320 (50%), Positives = 221/320 (69%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+YI+ G+GG G +SF REKFI+ GGPDGG GGRGG V ++ +LNTL+++R Sbjct: 1 MHFIDEVKIYIKGGNGGNGCVSFHREKFIDRGGPDGGDGGRGGSVIFRSNHHLNTLVNYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHF A++GE G NRSG G+ +VL VP+GTQ+F EDG L D + Q + G Sbjct: 61 YKQHFTAENGENGKDSNRSGKSGKSLVLDVPIGTQIFSEDGNILFYDFTVDDQSFEIIKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN+HFKSS NQAP G + +E I L LKL++D+G++GLPNAGKSTFL+ VT Sbjct: 121 GSGGLGNSHFKSSVNQAPRKRTEGEIAEEMWIHLSLKLLSDVGLVGLPNAGKSTFLSVVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+V +EF++ADIPG+I+ AHQG G+GD+FLKH ER +VL Sbjct: 181 AAKPKIADYPFTTLVPNLGVVYVDDEEFVIADIPGLIEGAHQGHGLGDKFLKHIERCNVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ +V A Y + EL Y+ L+ KIE + L++ D + + + K N+L Sbjct: 241 IHLIDGSSNDVVADYNTVRLELELYSDYLKNKIETICLNKCDVLTDEEIQEKINKLQKAT 300 Query: 301 GQVPFEFSSITGHGIPQILE 320 + F S+ T G+ +I++ Sbjct: 301 NKEIFPISTCTNAGVNKIVK 320 >gi|15620447|gb|AAL03845.1| GTP-binding protein [Rickettsia conorii str. Malish 7] Length = 362 Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 161/320 (50%), Positives = 221/320 (69%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+YI+ G+GG G +SF REKFI+ GGPDGG GGRGG V ++ +LNTL+++R Sbjct: 33 MHFIDEVKIYIKGGNGGNGCVSFHREKFIDRGGPDGGDGGRGGSVIFRSNHHLNTLVNYR 92 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHF A++GE G NRSG G+ +VL VP+GTQ+F EDG L D + Q + G Sbjct: 93 YKQHFTAENGENGKDSNRSGKSGKSLVLDVPIGTQIFSEDGNILFYDFTVDDQSFEIIKG 152 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN+HFKSS NQAP G + +E I L LKL++D+G++GLPNAGKSTFL+ VT Sbjct: 153 GSGGLGNSHFKSSVNQAPRKRTEGEIAEEMWIHLSLKLLSDVGLVGLPNAGKSTFLSVVT 212 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+V +EF++ADIPG+I+ AHQG G+GD+FLKH ER +VL Sbjct: 213 AAKPKIADYPFTTLVPNLGVVYVDDEEFVIADIPGLIEGAHQGHGLGDKFLKHIERCNVL 272 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ +V A Y + EL Y+ L+ KIE + L++ D + + + K N+L Sbjct: 273 IHLIDGSSNDVVADYNTVRLELELYSDYLKNKIETICLNKCDVLTDEEIQEKINKLQKAT 332 Query: 301 GQVPFEFSSITGHGIPQILE 320 + F S+ T G+ +I++ Sbjct: 333 NKEIFPISTCTNAGVNKIVK 352 >gi|157826318|ref|YP_001494038.1| GTPase ObgE [Rickettsia akari str. Hartford] gi|261277741|sp|A8GQ55|OBG_RICAH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|157800276|gb|ABV75530.1| GTPase ObgE [Rickettsia akari str. Hartford] Length = 330 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 159/320 (49%), Positives = 223/320 (69%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+YI+ G+GG G +SF REKFI+ GGPDGG GGRGG V ++ +LNTL+++R Sbjct: 1 MNFIDEVKIYIKGGNGGNGCVSFHREKFIDRGGPDGGDGGRGGSVIFRSNHHLNTLVNYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHF A++GE G NRSG G+ +VL VP+GTQ+F EDG L+ D ++ Q + G Sbjct: 61 YKQHFTAENGENGKGSNRSGKSGKSLVLDVPIGTQIFSEDGNILLHDFTEDDQSFEIIKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN+HFK+S NQAP G + +E I L LKL++D+G++GLPNAGKSTFL+ VT Sbjct: 121 GSGGLGNSHFKTSVNQAPRKRTEGEIAEEMWIHLSLKLLSDVGLVGLPNAGKSTFLSVVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL P+LG+V +EF++ADIPG+I+ AHQG G+GD+FLKH ER +VL Sbjct: 181 AAKPKIADYPFTTLVPHLGVVYVDDEEFVIADIPGLIEGAHQGHGLGDKFLKHIERCNVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ +V Y + EL +Y+ L KIEI+ L++ D + + + K N+L Sbjct: 241 IHLIDGSSNDVVVDYNTVRLELGSYSDHLEHKIEIICLNKCDVLTDEEIQEKINKLQQAT 300 Query: 301 GQVPFEFSSITGHGIPQILE 320 + F S+ T G+ +I++ Sbjct: 301 NKEVFSISTYTNLGVNKIVK 320 >gi|57239213|ref|YP_180349.1| GTPase ObgE [Ehrlichia ruminantium str. Welgevonden] gi|58579171|ref|YP_197383.1| GTPase ObgE [Ehrlichia ruminantium str. Welgevonden] gi|81352893|sp|Q5HB45|OBG_EHRRW RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|57161292|emb|CAH58213.1| conserved hypothetical GTP-binding protein [Ehrlichia ruminantium str. Welgevonden] gi|58417797|emb|CAI27001.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden] Length = 340 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 163/308 (52%), Positives = 219/308 (71%), Gaps = 1/308 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DEAKVY+++G GG G SFRREKFIEFGGPDGG+GG GG + A+ ++NTLI F+ Sbjct: 1 MSFIDEAKVYLKAGKGGDGCSSFRREKFIEFGGPDGGNGGNGGSIIFIASHHVNTLIYFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QH KA++G G+ +N+ G G D+ + VP+GTQ+++E+G +LI DL+ E Q+ I A G Sbjct: 61 YKQHIKAENGHPGLSKNKFGLSGRDITIEVPIGTQIYDEEG-TLITDLNSENQKFIAAQG 119 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN+ +K+STN+AP Y G G+EK I LKLK+I+D+GIIGLPNAGKS+FLAS T Sbjct: 120 GKGGIGNSRYKTSTNRAPRYFTLGEQGEEKWIILKLKIISDVGIIGLPNAGKSSFLASCT 179 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +K KIA+YPFTTL P LG+ E +LADIPG+I AH G GIGD+FLKH ER +L Sbjct: 180 NSKTKIANYPFTTLEPELGVAFINNTELVLADIPGLISGAHLGYGIGDKFLKHIERCSIL 239 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LHI+ E++ +Y+CI ELS Y+ L +K E + L++ D +D + +A KK LA Sbjct: 240 LHIIDCTLEDIIDSYKCIRKELSLYSKALTEKTEFILLNKCDLLDKEEIAIKKRLLAEHT 299 Query: 301 GQVPFEFS 308 + F S Sbjct: 300 KKEIFTSS 307 >gi|58617224|ref|YP_196423.1| GTPase ObgE [Ehrlichia ruminantium str. Gardel] gi|75432771|sp|Q5FH94|OBG_EHRRG RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|58416836|emb|CAI27949.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel] Length = 340 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 162/308 (52%), Positives = 220/308 (71%), Gaps = 1/308 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DEAKVY+++G GG G SFRREKFIEFGGPDGG+GG GG + A+ ++NTLI F+ Sbjct: 1 MSFIDEAKVYLKAGKGGDGCSSFRREKFIEFGGPDGGNGGNGGSIIFIASHHVNTLIYFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QH KA++G G+ +N+ G G D+ + VP+GTQ+++E+G +LI DL+ E Q+ I+A G Sbjct: 61 YKQHIKAENGHPGLSKNKFGLSGRDITIEVPIGTQIYDEEG-TLITDLNSENQKFIVAQG 119 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN+ +K+STN+AP Y G G+EK I LKLK+I+D+GIIGLPNAGKS+FLAS T Sbjct: 120 GKGGIGNSRYKTSTNRAPRYFTLGEQGEEKWIILKLKIISDVGIIGLPNAGKSSFLASCT 179 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +K KIA+YPFTTL P LG+ E +LADIPG+I AH G GIGD+FLKH ER +L Sbjct: 180 NSKTKIANYPFTTLEPELGVAFINNTELVLADIPGLISGAHLGYGIGDKFLKHIERCSIL 239 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LHI+ E++ +Y+CI ELS Y+ L +K E + L++ D +D + ++ KK LA Sbjct: 240 LHIIDCTLEDIIDSYKCIRKELSLYSKALTEKTEFILLNKCDLLDKEEISIKKRLLAEHT 299 Query: 301 GQVPFEFS 308 + F S Sbjct: 300 KKEIFTSS 307 >gi|229587210|ref|YP_002845711.1| GTPase ObgE [Rickettsia africae ESF-5] gi|228022260|gb|ACP53968.1| GTP-binding protein [Rickettsia africae ESF-5] Length = 348 Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 160/320 (50%), Positives = 220/320 (68%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+YI+ G+GG G +SF REKFI+ GGPDGG GGRGG V ++ +LNTL+++R Sbjct: 19 MHFIDEVKIYIKGGNGGNGCVSFHREKFIDRGGPDGGDGGRGGSVIFRSNHHLNTLVNYR 78 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHF A++GE G NRSG G+ +VL VP+GTQ+ EDG L D + Q + G Sbjct: 79 YKQHFTAENGENGKDSNRSGKSGKSLVLDVPIGTQILSEDGNILFYDFTVDDQSFEIIKG 138 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN+HFKSS NQAP G + +E I L LKL++D+G++GLPNAGKSTFL+ VT Sbjct: 139 GSGGLGNSHFKSSVNQAPRKRTEGEIAEEMWIHLSLKLLSDVGLVGLPNAGKSTFLSVVT 198 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+V +EF++ADIPG+I+ AHQG G+GD+FLKH ER +VL Sbjct: 199 AAKPKIADYPFTTLVPNLGVVYVDDEEFVIADIPGLIEGAHQGHGLGDKFLKHIERCNVL 258 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ +V A Y + EL Y+ L+ KIE + L++ D + + + K N+L Sbjct: 259 IHLIDGSSNDVVADYNTVRLELELYSDYLKNKIETICLNKCDVLTDEEIQEKINKLQKVT 318 Query: 301 GQVPFEFSSITGHGIPQILE 320 + F S+ T G+ +I++ Sbjct: 319 NKEIFPISTCTNAGVNKIVK 338 >gi|241563361|ref|XP_002401672.1| GTP-binding protein, putative [Ixodes scapularis] gi|215501864|gb|EEC11358.1| GTP-binding protein, putative [Ixodes scapularis] Length = 319 Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 158/319 (49%), Positives = 224/319 (70%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+YI+ G+GG G +SF REKFI+ GGPDGG+GGRGG V ++ +LNTL+++R Sbjct: 1 MNFIDEVKIYIKGGNGGNGCVSFHREKFIDRGGPDGGNGGRGGSVIFRSNHHLNTLVNYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHF A++G+ G NR G G+ +VL VP+GTQ+F EDG L+ D ++ Q + G Sbjct: 61 YKQHFTAENGKNGKGSNRIGKSGKSLVLDVPIGTQIFSEDGNILLHDFTEDDQSFEIIKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN+HFK+S NQAP G + +E I L LKL++++G++GLPNAGKSTFL+ VT Sbjct: 121 GSGGLGNSHFKTSVNQAPRKRTEGEIAEEMWIHLSLKLLSNVGLVGLPNAGKSTFLSVVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+V +EF++ADIPG+I+ AHQG G+GD+FLKH ER +VL Sbjct: 181 AAKPKIADYPFTTLVPNLGVVYVDDEEFVIADIPGLIEGAHQGHGLGDKFLKHIERCNVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ +V A Y + EL +Y+ L+ KIEI+ L++ D + + + K N+L Sbjct: 241 IHLIDGSSNDVVADYNTVRLELESYSDYLKNKIEIICLNKCDVLTDEEIQEKINKLQKAT 300 Query: 301 GQVPFEFSSITGHGIPQIL 319 + F S+ T G+ +I+ Sbjct: 301 NKEVFPISTYTNTGVNKII 319 >gi|157804232|ref|YP_001492781.1| GTPase ObgE [Rickettsia canadensis str. McKiel] gi|261277743|sp|A8F063|OBG_RICCK RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|157785495|gb|ABV73996.1| GTPase ObgE [Rickettsia canadensis str. McKiel] Length = 330 Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 159/320 (49%), Positives = 222/320 (69%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+YI+ G+GG G +SF REKFI+ GGPDGG GG GG V ++ +LNTL+++R Sbjct: 1 MNFIDEVKIYIKGGNGGNGCVSFHREKFIDRGGPDGGDGGHGGSVIFRSNHHLNTLVNYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHF A++G+ G NRSG G+ +VL VP+GTQ+F EDG L+ D ++ Q + G Sbjct: 61 YKQHFTAENGKNGQGSNRSGKSGKPLVLDVPIGTQIFSEDGNILLYDFIEDDQSFEIIKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN+HFK+S NQAP G + +E I L LKL++D+G +GLPNAGKSTFL+ VT Sbjct: 121 GSGGLGNSHFKTSVNQAPRKRTEGEVAKEMWIHLSLKLLSDVGFVGLPNAGKSTFLSVVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+V +EF++ADIPG+I+ AHQG G+GD+FLKH ER VL Sbjct: 181 AAKPKIADYPFTTLVPNLGVVYVDDEEFVIADIPGLIEGAHQGHGLGDKFLKHIERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ +V A Y + EL +Y+ L+ KIEI+ L++ D + + + K N+L Sbjct: 241 IHLIDGSSNDVVADYNTVRFELESYSDYLKNKIEIICLNKCDVLTDEEIQDKINKLRKVT 300 Query: 301 GQVPFEFSSITGHGIPQILE 320 + F S+ T G+ +I++ Sbjct: 301 NKEVFPISTYTNIGVNKIVK 320 >gi|85707779|ref|ZP_01038845.1| predicted GTPase [Erythrobacter sp. NAP1] gi|85689313|gb|EAQ29316.1| predicted GTPase [Erythrobacter sp. NAP1] Length = 356 Score = 302 bits (773), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 157/322 (48%), Positives = 220/322 (68%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M FLD+AK+Y++SG GG G +SFRREK++E+GGPDGG+GG+GGD+ +A LNTLIDFR Sbjct: 1 MHFLDQAKIYLKSGAGGPGAVSFRREKYVEYGGPDGGNGGKGGDIIFEAVPGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHFKA+ G G R+R+GA +D+V+ VPVGTQV ED ++ D + GQR+ G Sbjct: 61 YSQHFKAKRGNHGQGRDRTGAGADDLVIKVPVGTQVLSEDREEVLADFTEVGQRVTFLEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA +KS+TN+AP PG G+E +WL+LKL+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GLGGRGNASYKSATNRAPRQHQPGEPGEEMWVWLRLKLLADVGLVGLPNAGKSTFINAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AK K+ Y FTTL P LG+V+ +EF+LADIPG+I+ A GAGIGDRFL H ER VL Sbjct: 181 NAKAKVGHYAFTTLVPKLGVVRHKGREFVLADIPGLIEGAADGAGIGDRFLGHIERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ ++ A + + +EL AY + L K ++V L+++D D + EL Sbjct: 241 VHLIDIAGDDPVEAMRIVKEELEAYGAGLEDKPQLVALNKLDLADEELGVAFAEELIAAG 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 F S +G GI ++++ + Sbjct: 301 ADKVFAVSGASGEGIEELMDAV 322 >gi|91206139|ref|YP_538494.1| GTPase ObgE [Rickettsia bellii RML369-C] gi|157826429|ref|YP_001495493.1| GTPase ObgE [Rickettsia bellii OSU 85-389] gi|122425183|sp|Q1RGV9|OBG_RICBR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277742|sp|A8GUG0|OBG_RICB8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|91069683|gb|ABE05405.1| GTP-binding protein [Rickettsia bellii RML369-C] gi|157801733|gb|ABV78456.1| GTPase ObgE [Rickettsia bellii OSU 85-389] Length = 328 Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 157/320 (49%), Positives = 222/320 (69%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+YI+ G+GG G +SF REKFI+ GGPDGG GGRGG + ++ +LNTL+++R Sbjct: 1 MNFIDEVKIYIKGGNGGNGCVSFHREKFIDRGGPDGGDGGRGGSIIFRSNHHLNTLVNYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHF A GE G N+SG G+ + L VP+GTQ+F ED L+ D ++ Q + G Sbjct: 61 YKQHFIADSGENGKGSNKSGKSGKSLTLDVPIGTQIFAEDSDILLHDFTEDDQTFEIIKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG GN+HFK+S NQAP G + +E + L LKL++D+G++GLPNAGKSTFL+ V+ Sbjct: 121 GNGGLGNSHFKTSVNQAPRRRTEGEIAEEMWVQLSLKLLSDVGLVGLPNAGKSTFLSVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+V +EF++ADIPG+I+ A QG G+GD+FLKH ER +VL Sbjct: 181 AAKPKIADYPFTTLVPNLGVVYIDDEEFVIADIPGLIEGASQGHGLGDKFLKHIERCNVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ E+V A Y + EL +Y+ L+ K +I+ L++ID + + +A K +L Sbjct: 241 IHLIDGSSEDVVADYNIVRTELESYSDYLKDKTQIICLNKIDVLTDEEIAEKTTQLQKIT 300 Query: 301 GQVPFEFSSITGHGIPQILE 320 G+ F S+ T GI +I++ Sbjct: 301 GKEIFPISTYTNTGITKIIK 320 >gi|189183173|ref|YP_001936958.1| GTPase ObgE [Orientia tsutsugamushi str. Ikeda] gi|261277654|sp|B3CQ33|OBG_ORITI RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|189179944|dbj|BAG39724.1| GTP-binding protein Obg [Orientia tsutsugamushi str. Ikeda] Length = 329 Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 158/319 (49%), Positives = 221/319 (69%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEAK++I+ G+GG G +SFRREKF+ GGPDGG+GGRGGD+ +LNTLI+F+ Sbjct: 1 MQFIDEAKIFIKGGNGGDGCVSFRREKFVPNGGPDGGNGGRGGDIIFIGDRHLNTLINFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++QHF AQ+G G NR+G G+++VL VPVGTQ+ + +I DL ++GQ I+ G Sbjct: 61 FKQHFLAQNGRAGAGNNRTGKSGQNLVLKVPVGTQILSNNKEHVIFDLTKDGQEFIIIRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN +FKSS NQ P G +G +WL LKL++D+G++GLPNAGKSTFL+++T Sbjct: 121 GKGGLGNTYFKSSINQKPRKNTVGEIGDSMWVWLHLKLLSDVGLVGLPNAGKSTFLSAIT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+V F++ADIPG+I AH G G+GD+FLKH ER ++ Sbjct: 181 SAKPKIADYPFTTLTPNLGVVYINNNSFVVADIPGLIAGAHLGQGLGDKFLKHIERCRII 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ EN+ Y I DELS+Y+ L+ K EI+ ++ DT ++ + K EL Sbjct: 241 VHLLDITAENLLQNYYTIRDELSSYSLSLKDKTEILCFTKTDTQSNEVIMSKLLELQPVI 300 Query: 301 GQVPFEFSSITGHGIPQIL 319 +V + SS T +GI ++L Sbjct: 301 NRVIYPISSYTKYGIKKLL 319 >gi|148284519|ref|YP_001248609.1| GTPase ObgE [Orientia tsutsugamushi str. Boryong] gi|261277653|sp|A5CDM6|OBG_ORITB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|146739958|emb|CAM79990.1| GTP-binding protein [Orientia tsutsugamushi str. Boryong] Length = 329 Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 157/319 (49%), Positives = 220/319 (68%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEAK++I+ G+GG G +SFRREKF+ GGPDGG+GG GGD+ +LNTLI+F+ Sbjct: 1 MQFIDEAKIFIKGGNGGDGCVSFRREKFVPNGGPDGGNGGCGGDIIFIGDRHLNTLINFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++QHF AQ+G G NR+G G+++VL VPVGTQ+ + +I DL ++GQ I+ G Sbjct: 61 FKQHFLAQNGRAGAGNNRTGKSGQNLVLKVPVGTQILSNNKEHVIFDLTKDGQEFIIIRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN +FKSS NQ P G +G +WL LKL++D+G++GLPNAGKSTFL+++T Sbjct: 121 GKGGLGNTYFKSSINQKPRKNTVGEIGDSMWVWLHLKLLSDVGLVGLPNAGKSTFLSAIT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+V F++ADIPG+I AH G G+GD+FLKH ER ++ Sbjct: 181 SAKPKIADYPFTTLTPNLGVVYINNNSFVVADIPGLIAGAHLGQGLGDKFLKHIERCRII 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ EN+ Y I DELS+Y+ L+ K EI+ ++ DT ++ + K EL Sbjct: 241 VHLLDITAENLLQNYYTIRDELSSYSLSLKDKTEILCFTKTDTQSNEVIMSKLLELQPVI 300 Query: 301 GQVPFEFSSITGHGIPQIL 319 +V + SS T +GI ++L Sbjct: 301 NRVIYPISSYTKYGIKKLL 319 >gi|51474010|ref|YP_067767.1| GTPase ObgE [Rickettsia typhi str. Wilmington] gi|81389919|sp|Q68VS1|OBG_RICTY RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|51460322|gb|AAU04285.1| GTP-binding protein [Rickettsia typhi str. Wilmington] Length = 330 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 157/320 (49%), Positives = 222/320 (69%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+YI+ G+GG G ISF REKF++ GGPDGG GG GG V ++ ++NTL+++R Sbjct: 1 MHFIDEVKIYIKGGNGGNGCISFHREKFVDRGGPDGGDGGFGGSVIFRSNHHINTLVNYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++G G NRSG G+ ++L VP+GTQ+F EDG L+ D ++ + + G Sbjct: 61 YQQHFIAENGGNGKGSNRSGKSGKSLILDVPIGTQIFSEDGNILLHDFTEDEKSFEIIKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN+HFK+S NQAP G + QE I L+LKL++D+G++GLPNAGKSTFL+ VT Sbjct: 121 GCGGLGNSHFKTSVNQAPRKRTEGEIAQEMWIHLRLKLLSDVGLVGLPNAGKSTFLSVVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+V +EF++ADIPG+I AHQG G+GD+FLKH ER +VL Sbjct: 181 AAKPKIADYPFTTLVPNLGVVYINDEEFVIADIPGLIAGAHQGHGLGDKFLKHIERCNVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ NV A Y + EL +Y+ L+ KIEI+ +++ D + + + +K +L Sbjct: 241 IHLIDGSSHNVIADYDTVRFELESYSDYLKNKIEIICINKCDVLTDEEIQKKIKKLQRVT 300 Query: 301 GQVPFEFSSITGHGIPQILE 320 +V S+ T G+ +I++ Sbjct: 301 NKVVHPISTYTNLGVNKIVK 320 >gi|58584380|ref|YP_197953.1| GTPase ObgE [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|75498086|sp|Q5GTG3|OBG_WOLTR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|58418696|gb|AAW70711.1| Predicted GTPase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 340 Score = 298 bits (763), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 154/326 (47%), Positives = 223/326 (68%), Gaps = 2/326 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+Y+++GDGG G +SFRREKF+EFGGP+GG+GG+GG++ + +NLNTL++FR Sbjct: 1 MDFIDEVKLYLKAGDGGDGCVSFRREKFVEFGGPNGGNGGKGGNIVFVSDANLNTLLNFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++H KA G+ G R+RSG G+++VL VPVGTQ+ +E+ +I D ++ ++A G Sbjct: 61 YRRHVKAGSGKSGASRDRSGTAGKNIVLKVPVGTQIIDEESEKIILDFNKPDMEFLIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN +FKSS N+AP + G G+EK + LKLK+++D+GIIG+PNAGKS FL + Sbjct: 121 GKGGLGNTNFKSSINRAPRHFTCGQFGEEKYVVLKLKVLSDVGIIGMPNAGKSKFLTRCS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A K+ DYPFTT+ P+LG+ K E ++ DIPGII +AH G G+G +FLKH ER +L Sbjct: 181 NADTKVGDYPFTTIKPHLGVAKVDNSEVVIVDIPGIITDAHLGIGLGHKFLKHVERCKIL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ +NV +AY C+ +EL YNS+L KK EI+ L++ D + + KKN LA Sbjct: 241 LHLIDVTHDNVVSAYNCMRNELELYNSDLVKKEEIIVLNKCDLLRKVEIFEKKNHLANYL 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 + S G + IL L++K+ Sbjct: 301 NKEVLCLS--IGEDLQPILRLLNEKL 324 >gi|15604673|ref|NP_221191.1| GTPase ObgE [Rickettsia prowazekii str. Madrid E] gi|81554757|sp|Q9ZCB6|OBG_RICPR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|3861368|emb|CAA15267.1| unknown [Rickettsia prowazekii] gi|292572504|gb|ADE30419.1| GTP-binding protein [Rickettsia prowazekii Rp22] Length = 331 Score = 298 bits (763), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 159/320 (49%), Positives = 223/320 (69%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+YI+ G+GG G ISF REKFI+ GGPDGG GG GG V ++ ++NTL+++R Sbjct: 1 MHFIDEVKIYIKGGNGGNGCISFHREKFIDRGGPDGGDGGFGGSVIFRSNHHINTLVNYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF A++GE G NRSG G+ ++L VPVGTQ+F +DG L+ D ++ + + G Sbjct: 61 YQQHFTAENGENGKGSNRSGKSGKSLILDVPVGTQIFSQDGDILLYDFTEDEKSFEIIKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN+HFK+S NQAP + G + +E I L+LKL++D+G+IGLPNAGKSTFL+ VT Sbjct: 121 GCGGLGNSHFKTSVNQAPRKSTEGEIAEEMWIHLRLKLLSDVGLIGLPNAGKSTFLSVVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+V +EF++ADIPG+I AHQG G+GD+FLKH ER +VL Sbjct: 181 AAKPKIADYPFTTLVPNLGVVYIDDEEFVIADIPGLIAGAHQGYGLGDKFLKHIERCNVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ NV A Y + EL +Y+ L+ KIEI+ L++ D + + + +K +L Sbjct: 241 IHLIDGASNNVIADYNTVRFELESYSDYLKNKIEIICLNKCDVLVDEEIQKKIKKLQKVT 300 Query: 301 GQVPFEFSSITGHGIPQILE 320 +V S+ G+ +I++ Sbjct: 301 NKVVHPISTYNNQGVNKIVK 320 >gi|161347549|ref|YP_460755.2| GTPase ObgE [Syntrophus aciditrophicus SB] gi|261277914|sp|Q2LR77|OBG_SYNAS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 342 Score = 298 bits (763), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 164/335 (48%), Positives = 231/335 (68%), Gaps = 5/335 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+Y+++GDGG G +SFRREK++ FGGP+GG GG+GGDV I ATS+ NTL+D + Sbjct: 1 MKFIDEAKIYVKAGDGGRGCVSFRREKYVPFGGPNGGDGGKGGDVVIVATSSHNTLLDLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QH A+HG G NR+G D+ + VPVGT V + + ++ DL EGQ I+A G Sbjct: 61 YKQHHVAKHGGHGEGSNRTGRSAPDLTIPVPVGTLVMDSESGEILADLVTEGQEYIVAHG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F ++TNQAP YA GI G+E+ I L+LKL+AD+GIIGLPN GKSTF++ V+ Sbjct: 121 GIGGRGNARFATATNQAPRYAQSGIPGEERWIRLELKLLADVGIIGLPNVGKSTFISRVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 A+PKIADYPFTTL P+LG+V+ G F+LADIPG+I+ AH+G G+G +FL+H ERT Sbjct: 181 AARPKIADYPFTTLTPHLGVVRYGDDLNTFVLADIPGLIEGAHEGVGMGIQFLRHIERTA 240 Query: 239 VLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 +LLHI+ + ++ I EL++Y+ EL K +IV +++ D + + Sbjct: 241 LLLHIIDISRDETSTGWHDFEVINSELASYSPELILKPQIVAVNKTDLPITREKLKDTLR 300 Query: 296 LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 + + G V + FS+ TG GIP +L + + + +IR Sbjct: 301 IFAEKGIVLYPFSAATGEGIPALLYKIGEALKNIR 335 >gi|85721644|gb|ABC76587.1| GTP-binding protein CgtA [Syntrophus aciditrophicus SB] Length = 346 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 164/335 (48%), Positives = 231/335 (68%), Gaps = 5/335 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+Y+++GDGG G +SFRREK++ FGGP+GG GG+GGDV I ATS+ NTL+D + Sbjct: 5 MKFIDEAKIYVKAGDGGRGCVSFRREKYVPFGGPNGGDGGKGGDVVIVATSSHNTLLDLK 64 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QH A+HG G NR+G D+ + VPVGT V + + ++ DL EGQ I+A G Sbjct: 65 YKQHHVAKHGGHGEGSNRTGRSAPDLTIPVPVGTLVMDSESGEILADLVTEGQEYIVAHG 124 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F ++TNQAP YA GI G+E+ I L+LKL+AD+GIIGLPN GKSTF++ V+ Sbjct: 125 GIGGRGNARFATATNQAPRYAQSGIPGEERWIRLELKLLADVGIIGLPNVGKSTFISRVS 184 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 A+PKIADYPFTTL P+LG+V+ G F+LADIPG+I+ AH+G G+G +FL+H ERT Sbjct: 185 AARPKIADYPFTTLTPHLGVVRYGDDLNTFVLADIPGLIEGAHEGVGMGIQFLRHIERTA 244 Query: 239 VLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 +LLHI+ + ++ I EL++Y+ EL K +IV +++ D + + Sbjct: 245 LLLHIIDISRDETSTGWHDFEVINSELASYSPELILKPQIVAVNKTDLPITREKLKDTLR 304 Query: 296 LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 + + G V + FS+ TG GIP +L + + + +IR Sbjct: 305 IFAEKGIVLYPFSAATGEGIPALLYKIGEALKNIR 339 >gi|73667109|ref|YP_303125.1| GTPase ObgE [Ehrlichia canis str. Jake] gi|123614893|sp|Q3YRX8|OBG_EHRCJ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|72394250|gb|AAZ68527.1| GTP1/OBG sub- domain [Ehrlichia canis str. Jake] Length = 340 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 170/322 (52%), Positives = 231/322 (71%), Gaps = 3/322 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DEAK+Y+++G+GG G SFRREKFIEFGGPDGG+GG GG++ + ++NTL+ FR Sbjct: 1 MSFIDEAKIYLKAGNGGDGCSSFRREKFIEFGGPDGGNGGNGGNIIFYTSHHINTLLYFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QH KA++G G + +SG+ G+DV++ VP+GTQ+++EDG+ LI DL++E Q+ I A G Sbjct: 61 YKQHIKAENGNPGSSKKKSGSSGKDVIIKVPIGTQLYDEDGM-LITDLNEENQKFIAAHG 119 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA++K+STN+AP + G G+EK I LKLK+I+D+GIIGLPNAGKS+FLAS T Sbjct: 120 GKGGIGNANYKTSTNRAPRHFTFGKRGEEKHIILKLKIISDVGIIGLPNAGKSSFLASCT 179 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +K KIADYPFTTL P+LG+ E +LADIPG+I AH G GIGD+FLKH ER +L Sbjct: 180 NSKTKIADYPFTTLEPHLGVAFIDNTELVLADIPGLIPGAHLGHGIGDKFLKHIERCSIL 239 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LHI+ +N+ +Y+CI ELS YN EL K E + L++ D +D + +KK L+ Sbjct: 240 LHIIDCTLDNIIESYECIRKELSFYNKELSNKTEFIVLNKSDLLDKKEINQKKQILSNHT 299 Query: 301 GQVPFEFSSITGHGIPQILECL 322 + F SSI + P IL L Sbjct: 300 KKEIF-ISSIKNNRYP-ILSTL 319 >gi|326388931|ref|ZP_08210513.1| Small GTP-binding protein domain [Novosphingobium nitrogenifigens DSM 19370] gi|326206531|gb|EGD57366.1| Small GTP-binding protein domain [Novosphingobium nitrogenifigens DSM 19370] Length = 351 Score = 295 bits (754), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 166/322 (51%), Positives = 223/322 (69%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M FLD+AK+YIRSG GG G +SFRREK++E+GGPDGG GG+GGD+ +A S LNTLIDFR Sbjct: 1 MHFLDQAKIYIRSGAGGPGAVSFRREKYVEYGGPDGGDGGKGGDIVFEAVSGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHFKAQ G G +NR+G G D+V+ VPVGTQV ++D +++ DL + GQR++ G Sbjct: 61 YTQHFKAQRGLGGAGKNRTGGGGRDLVIKVPVGTQVLDDDRETVLIDLVEVGQRVVFLRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNA FKSSTN+AP PG GQE +WL+LKL+AD G++GLPNAGKSTF+ ++ Sbjct: 121 GDGGRGNASFKSSTNRAPRQCGPGWPGQEMWVWLRLKLLADAGLVGLPNAGKSTFINQIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+ K+ DY FTT P LG+V+ +EF+LADIPG+I A GAGIGDRFL H ER VL Sbjct: 181 NARAKVGDYAFTTTRPQLGVVRHHNREFVLADIPGLIAGAADGAGIGDRFLGHIERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ + A + DEL AY + L +K +V L++ID VD++ + +EL Sbjct: 241 IHLIDIHGTDPAEAMAIVADELEAYGAGLDEKPRLVALNKIDLVDAELVRAFTDELMAAG 300 Query: 301 GQVPFEFSSITGHGIPQILECL 322 + F S TG G+ +L+ + Sbjct: 301 AERVFPISGATGKGMDALLDAV 322 >gi|68171489|ref|ZP_00544873.1| GTP-binding protein, HSR1-related:GTP1/OBG subdomain [Ehrlichia chaffeensis str. Sapulpa] gi|88658589|ref|YP_507356.1| GTPase ObgE [Ehrlichia chaffeensis str. Arkansas] gi|123493390|sp|Q2GGS7|OBG_EHRCR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|67999095|gb|EAM85762.1| GTP-binding protein, HSR1-related:GTP1/OBG subdomain [Ehrlichia chaffeensis str. Sapulpa] gi|88600046|gb|ABD45515.1| GTP-binding protein, GTP1/Obg family [Ehrlichia chaffeensis str. Arkansas] Length = 340 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 166/310 (53%), Positives = 227/310 (73%), Gaps = 2/310 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DEAKVY+++G+GG G SFRREKFIEFGGPDGG+GG GG++ ++++NTL+ FR Sbjct: 1 MSFIDEAKVYLKAGNGGNGCSSFRREKFIEFGGPDGGNGGNGGNIVFATSNHINTLLYFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QH KA++G G + +SG+ G+D+++ VP+GTQ+++EDGI LI DL E Q++I+A G Sbjct: 61 YKQHIKAENGNPGSGKKKSGSSGKDIIIKVPIGTQLYDEDGI-LIADLSSENQKVIVAQG 119 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA++K+STN+AP Y G G+EK I LKLK+I+DIGIIGLPNAGKS+FLAS T Sbjct: 120 GKGGTGNANYKTSTNRAPRYFTLGEAGEEKYITLKLKIISDIGIIGLPNAGKSSFLASCT 179 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +K KIADYPFTTL P+LG+ +E +LADIPG+I AH G GIGD+FLKH ER L Sbjct: 180 DSKTKIADYPFTTLEPHLGVAFIDNRELVLADIPGLIAGAHLGYGIGDKFLKHIERCSTL 239 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LHI+ +++ +Y+CI EL YN EL K E + L++ D ++ + +KK +L +Q Sbjct: 240 LHIIDCTLDDIIDSYECIRKELLLYNKELINKPEFIVLNKSDLLEKKEITKKK-QLLSQY 298 Query: 301 GQVPFEFSSI 310 + SSI Sbjct: 299 TKKEIFVSSI 308 >gi|189424076|ref|YP_001951253.1| GTPase ObgE [Geobacter lovleyi SZ] gi|261266800|sp|B3E609|OBG_GEOLS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|189420335|gb|ACD94733.1| GTP-binding protein Obg/CgtA [Geobacter lovleyi SZ] Length = 338 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 159/332 (47%), Positives = 238/332 (71%), Gaps = 4/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE ++ SG GGAG +SFRREKFI FGGP+GG GGRGGD+ +AT L+TL++ R Sbjct: 1 MKFIDEVTLHCASGHGGAGCVSFRREKFIPFGGPNGGDGGRGGDLIFEATKALSTLLELR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++QH KA+ G GM ++R GA GED+++ VPVGT + + + ++ DL ++GQRIIL G Sbjct: 61 HKQHQKAERGRHGMGKDRHGAAGEDLIVKVPVGTLIKDFETGEVLADLTEDGQRIILLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F ++TN+AP +A PG G+E+ + L+LKL+AD+G++GLPNAGKS+ + V+ Sbjct: 121 GRGGQGNARFATATNKAPKFAQPGEEGEERKLRLELKLMADVGLLGLPNAGKSSLITKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL P+LG+V + Y+ F++ADIPGII+ AH+GAG+G RFLKH ER+ + Sbjct: 181 AARPKIADYPFTTLAPSLGVVGYKNYRSFVMADIPGIIEGAHEGAGLGHRFLKHLERSGI 240 Query: 240 LLHIV--SAL-EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V S L E + AA++ I EL+ ++ EL +K +IVGL+++D + + Sbjct: 241 LVHLVDISGLPESDPYAAFEAINRELAMFSEELGQKAQIVGLTKMDLPTAQEHLTEAQAW 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 + + SS+TG G+ +L+ + +++++ Sbjct: 301 FQERKIPVYPISSMTGEGVEALLDAIAERLWA 332 >gi|117926625|ref|YP_867242.1| GTP1/OBG domain-containing protein [Magnetococcus sp. MC-1] gi|261266887|sp|A0LCZ3|OBG_MAGSM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|117610381|gb|ABK45836.1| GTP1/OBG sub domain protein [Magnetococcus sp. MC-1] Length = 387 Score = 291 bits (746), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 169/327 (51%), Positives = 229/327 (70%), Gaps = 9/327 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAK+Y++SGDGG G ISFRREK+I FGGPDGG GGRGGDV QA +LNTLIDFR Sbjct: 1 MKFLDEAKIYLKSGDGGGGCISFRREKYIPFGGPDGGDGGRGGDVIFQADGHLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHFKA+ G GM +GA E +++ VPVGT + ++ +++ D+ ++GQ+ + G Sbjct: 61 YKQHFKAKRGTHGMGSQCTGASAEALIIKVPVGTIIRDDADGTILVDMVEDGQQFLACKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSSTNQAP A+PG G+E + L++KL+AD+G++G+PNAGKST ++ V+ Sbjct: 121 GDGGRGNMHFKSSTNQAPRRADPGFPGEEMWVRLEMKLLADVGLVGMPNAGKSTLISKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ E F++ADIPG+IK AH+G G+G FLKH ER V Sbjct: 181 AAKPKIADYPFTTLQPNLGVVRVEMDHSFVMADIPGLIKGAHEGHGLGMFFLKHIERCAV 240 Query: 240 LLHIV---SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD----TLARK 292 LLH+V S +++ + +Q I EL+ Y+ +L +K I+ LS+ D + + L+ Sbjct: 241 LLHLVEIDSLEDDDPVSRFQTIEAELAGYSEQLAQKPRILVLSKADLLGEEDRQVVLSWF 300 Query: 293 KNELATQCGQVPFEFSSITGHGIPQIL 319 K L V F SS TG GI ++ Sbjct: 301 KERLGEAMPPV-FILSSATGEGIEALV 326 >gi|190570656|ref|YP_001975014.1| GTP-binding protein, GTP1/OBG family [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019094|ref|ZP_03334901.1| GTP-binding protein, GTP1/OBG family [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|261277747|sp|B3CNP2|OBG_WOLPP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|190356928|emb|CAQ54312.1| GTP-binding protein, GTP1/OBG family [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995203|gb|EEB55844.1| GTP-binding protein, GTP1/OBG family [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 337 Score = 291 bits (746), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 147/298 (49%), Positives = 209/298 (70%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+Y+++GDGG G SFRREKF+EFGGP+GG+GG+GGD+ + +NLNTL++FR Sbjct: 1 MDFIDEVKLYLKAGDGGDGCASFRREKFVEFGGPNGGNGGKGGDIIFISDANLNTLLNFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++H KA G+ G R+RSG G+D++L VPVGTQ+ +E+ +I DLD+ + G Sbjct: 61 CRRHIKASSGKSGTSRDRSGTAGKDIILKVPVGTQIIDEESEEVIVDLDKPDMEFQVVQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN +FKSSTN+AP + G G+E+ I LKLK+++D+GIIG+PN GKS FL + Sbjct: 121 GKGGLGNTNFKSSTNRAPRHFTHGQPGEERNIVLKLKVLSDVGIIGMPNVGKSKFLTRCS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 + K+ DY FTT+ P+LG+ K Y E ++ADIPGII +AH G G+G +FLKH ER +L Sbjct: 181 NSDTKVGDYEFTTIRPHLGVAKVDYSEIVIADIPGIIADAHLGVGLGHKFLKHIERCKIL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 LH++ + + +AY C +EL YNS+L +K EIV L++ D ++ + KKN LA Sbjct: 241 LHLIDVTHDEIISAYNCTHNELKLYNSDLVEKEEIVVLNKCDLLEETEILEKKNHLAN 298 >gi|87134848|gb|ABD25590.1| Small GTP-binding protein domain [Novosphingobium aromaticivorans DSM 12444] Length = 378 Score = 290 bits (743), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 165/323 (51%), Positives = 224/323 (69%), Gaps = 1/323 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M FLD+AK++IRSG GG G +SFRREK++E+GGPDGG GG+GGD+ +A + LNTLIDFR Sbjct: 27 MHFLDQAKIFIRSGQGGPGAVSFRREKYVEYGGPDGGDGGKGGDIIFEAVTGLNTLIDFR 86 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHFKAQ G G +NR+GA G D+V+ VPVGTQV ++D +++ DL + GQR IL G Sbjct: 87 YAQHFKAQRGHGGAGKNRTGAGGNDLVIKVPVGTQVLDDDRETVLLDLTEAGQREILLRG 146 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNA +K+STN+AP PG G+E +WL+LKL+AD G++GLPNAGKSTF+ +T Sbjct: 147 GDGGRGNASYKTSTNRAPRQHGPGWPGEEMYVWLRLKLLADAGLVGLPNAGKSTFINQIT 206 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 K K+ DY FTTL P LG+V+ +EF+LADIPG+I+ A GAGIGDRFL H ER VL Sbjct: 207 NTKAKVGDYAFTTLRPQLGVVRHRNREFVLADIPGLIEGAADGAGIGDRFLGHIERCRVL 266 Query: 241 LHIVSALEE-NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 +H++ + + A + EL AY + L +K +V L++ID VD + + ++EL Sbjct: 267 IHLIDIHSDVDPVEAMHIVEGELEAYGAGLDEKPRLVALNKIDLVDKELVKAFQDELLEG 326 Query: 300 CGQVPFEFSSITGHGIPQILECL 322 F S TG G+ +L+ + Sbjct: 327 GADRVFPISGATGKGMDALLDAV 349 >gi|196018451|ref|XP_002118808.1| hypothetical protein TRIADDRAFT_34780 [Trichoplax adhaerens] gi|190578153|gb|EDV18707.1| hypothetical protein TRIADDRAFT_34780 [Trichoplax adhaerens] Length = 325 Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 162/315 (51%), Positives = 218/315 (69%), Gaps = 1/315 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DEAK+++++GDGG G SFRREK+IEFGGPDGG+GG GG V + NLNTLIDFR Sbjct: 1 MHFIDEAKIFLKAGDGGNGASSFRREKYIEFGGPDGGNGGNGGSVIFRVVENLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+QHFKA G+ G +N++G GED+++ +P GTQ+ ED ++ D DQ Q I+ G Sbjct: 61 YKQHFKAPKGQTGQGKNKTGKSGEDLIIDIPQGTQILSEDKKYILYDFDQPEQEEIIIKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN++FKSS NQAP G +G E +WL LKL++++G++G+PNAGKSTFL+ VT Sbjct: 121 GSGGLGNSNFKSSRNQAPRKFTEGKIGNEMWVWLNLKLLSNVGLLGMPNAGKSTFLSKVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL LG+V + EF +ADIPG+I+NA G G+G +FLKH ER +L Sbjct: 181 SAKPKIADYPFTTLKTQLGVVYYEHNEFTIADIPGLIENASLGQGLGIKFLKHLERCEIL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LHI+ +N+ Y+ I EL Y + L K E++ LS+ D VD + + +KK EL Sbjct: 241 LHIIDITSDNIIDNYKIIRKELENYKN-LASKKELILLSKTDMVDQNEVDKKKKELEKIT 299 Query: 301 GQVPFEFSSITGHGI 315 + +SSIT GI Sbjct: 300 NKEVMTYSSITNTGI 314 >gi|161760696|ref|YP_496424.2| GTPase ObgE [Novosphingobium aromaticivorans DSM 12444] gi|261277915|sp|Q2G983|OBG_NOVAD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 352 Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 165/323 (51%), Positives = 224/323 (69%), Gaps = 1/323 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M FLD+AK++IRSG GG G +SFRREK++E+GGPDGG GG+GGD+ +A + LNTLIDFR Sbjct: 1 MHFLDQAKIFIRSGQGGPGAVSFRREKYVEYGGPDGGDGGKGGDIIFEAVTGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHFKAQ G G +NR+GA G D+V+ VPVGTQV ++D +++ DL + GQR IL G Sbjct: 61 YAQHFKAQRGHGGAGKNRTGAGGNDLVIKVPVGTQVLDDDRETVLLDLTEAGQREILLRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNA +K+STN+AP PG G+E +WL+LKL+AD G++GLPNAGKSTF+ +T Sbjct: 121 GDGGRGNASYKTSTNRAPRQHGPGWPGEEMYVWLRLKLLADAGLVGLPNAGKSTFINQIT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 K K+ DY FTTL P LG+V+ +EF+LADIPG+I+ A GAGIGDRFL H ER VL Sbjct: 181 NTKAKVGDYAFTTLRPQLGVVRHRNREFVLADIPGLIEGAADGAGIGDRFLGHIERCRVL 240 Query: 241 LHIVSALEE-NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 +H++ + + A + EL AY + L +K +V L++ID VD + + ++EL Sbjct: 241 IHLIDIHSDVDPVEAMHIVEGELEAYGAGLDEKPRLVALNKIDLVDKELVKAFQDELLEG 300 Query: 300 CGQVPFEFSSITGHGIPQILECL 322 F S TG G+ +L+ + Sbjct: 301 GADRVFPISGATGKGMDALLDAV 323 >gi|206889900|ref|YP_002248280.1| GTP-binding protein Obg/CgtA [Thermodesulfovibrio yellowstonii DSM 11347] gi|261277727|sp|B5YJ65|OBG_THEYD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|206741838|gb|ACI20895.1| GTP-binding protein Obg/CgtA [Thermodesulfovibrio yellowstonii DSM 11347] Length = 337 Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 164/330 (49%), Positives = 227/330 (68%), Gaps = 4/330 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D K+Y+++GDGG G ISFRREK++ GGPDGG GG+GGDV IQA+S L+TL+D R Sbjct: 1 MQFIDYVKIYVKAGDGGRGCISFRREKYVPKGGPDGGDGGKGGDVIIQASSELHTLLDHR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ+ +KAQ G+ G N G GE++++ VPVGT V + + ++ DLD+E + I+A G Sbjct: 61 YQKVYKAQRGQHGKGSNMKGKDGENLIIKVPVGTVVKDAETEEVLADLDEEEKYFIVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GGFGNAHF + TNQAP YA PG GQE+ + L+LKL+AD+G+IGLPNAGKST ++ ++ Sbjct: 121 GRGGFGNAHFATPTNQAPRYAQPGEKGQERWVILELKLLADVGLIGLPNAGKSTLISVIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL P LG+VK E Y+ F++ADIPG+I+ AH+GAG+G +FL+H ERT + Sbjct: 181 SAKPKIADYPFTTLIPVLGVVKYENYQSFVVADIPGLIEGAHKGAGLGHQFLRHVERTSL 240 Query: 240 LLHIVSA---LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V E + + ++ I EL YN L KK V ++ID K + Sbjct: 241 LLHLVDVSDFSESDPREDFEKIQKELELYNPALTKKPFAVVGTKIDIAYKGDRLGKLKKY 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + G F S++ GI ++L L +K+ Sbjct: 301 CEEKGIDFFPISAVKKEGIDKLLHYLSEKV 330 >gi|326559433|gb|EGE09858.1| GTPase ObgE [Moraxella catarrhalis 46P47B1] gi|326559712|gb|EGE10122.1| GTPase ObgE [Moraxella catarrhalis 7169] gi|326572468|gb|EGE22460.1| GTPase ObgE [Moraxella catarrhalis BC8] Length = 404 Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 162/332 (48%), Positives = 228/332 (68%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + +++GDGG G +SFRREKF+ GGPDGG GG+GGDV+ A N NTL+D+R Sbjct: 1 MRFIDEAVISVKAGDGGNGIVSFRREKFVPKGGPDGGDGGKGGDVYAIADDNTNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+A GE G +NRSG +D+ L VP+GT + + D +I DL ++GQ+I++A G Sbjct: 61 YTRKFEAHRGENGGSKNRSGKGADDIYLAVPIGTTIIDTDLDVVIGDLTEKGQKILIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKSSTNQAP A PG G+ + I L+LK++AD+G+IGLPNAGKSTF+ V+ Sbjct: 121 GDGGFGNTRFKSSTNQAPRKATPGFAGETRNIKLELKVVADVGLIGLPNAGKSTFIRQVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V G ++ F++ADIPG+I+ A GAG+G RFLKH RT Sbjct: 181 AARPKVADYPFTTLVPNLGVVDVGSHQSFVMADIPGLIEGASDGAGLGIRFLKHVARTRR 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHIV E + A Q IL+EL+ ++ EL + +I+ L++ID + ++ ++ Sbjct: 241 LLHIVDVQPIDESDPVANAQIILNELNKFSQELSQLPQILVLNKIDQIPNEQRDAVCQDI 300 Query: 297 ATQCGQV--PFEFSSITGHGIPQILECLHDKI 326 T+ G F S++TG G+ + L I Sbjct: 301 ITRLGWAGEVFYTSTLTGEGVESVKHHLMQVI 332 >gi|326568150|gb|EGE18234.1| GTPase ObgE [Moraxella catarrhalis BC7] Length = 404 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 162/332 (48%), Positives = 228/332 (68%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + +++GDGG G +SFRREKF+ GGPDGG GG+GGDV+ A N NTL+D+R Sbjct: 1 MRFIDEAVISVKAGDGGNGIVSFRREKFVPKGGPDGGDGGKGGDVYAIADDNTNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+A GE G +NRSG +D+ L VP+GT + + D +I DL ++GQ+I++A G Sbjct: 61 YTRKFEAHRGENGGSKNRSGKGADDIYLAVPIGTTIIDTDLDVVIGDLTEKGQKILIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKSSTNQAP A PG G+ + I L+LK++AD+G+IGLPNAGKSTF+ V+ Sbjct: 121 GDGGFGNTRFKSSTNQAPRKATPGFAGETRNIKLELKVVADVGLIGLPNAGKSTFIRQVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V G ++ F++ADIPG+I+ A GAG+G RFLKH RT Sbjct: 181 AARPKVADYPFTTLVPNLGVVDVGSHQSFVMADIPGLIEGASDGAGLGIRFLKHVARTRR 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHIV E + A Q IL+EL+ ++ EL + +I+ L++ID + ++ ++ Sbjct: 241 LLHIVDVQPIDESDPVANAQIILNELNKFSQELSQLPQILVLNKIDQIPNEQRDAVCQDI 300 Query: 297 ATQCGQV--PFEFSSITGHGIPQILECLHDKI 326 T+ G F S++TG G+ + L I Sbjct: 301 ITRLGWTGEVFYTSTLTGEGVEAVKHHLMQVI 332 >gi|326562994|gb|EGE13270.1| GTPase ObgE [Moraxella catarrhalis 12P80B1] gi|326564978|gb|EGE15178.1| GTPase ObgE [Moraxella catarrhalis 103P14B1] gi|326572485|gb|EGE22474.1| GTPase ObgE [Moraxella catarrhalis CO72] Length = 404 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 162/332 (48%), Positives = 228/332 (68%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + +++GDGG G +SFRREKF+ GGPDGG GG+GGDV+ A N NTL+D+R Sbjct: 1 MRFIDEAVISVKAGDGGNGIVSFRREKFVPKGGPDGGDGGKGGDVYAIADDNTNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+A GE G +NRSG +D+ L VP+GT + + D +I DL ++GQ+I++A G Sbjct: 61 YTRKFEAHRGENGGSKNRSGKGADDIYLAVPIGTTIIDTDLDVVIGDLTEKGQKILIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKSSTNQAP A PG G+ + I L+LK++AD+G+IGLPNAGKSTF+ V+ Sbjct: 121 GDGGFGNTRFKSSTNQAPRKATPGFAGETRNIKLELKVVADVGLIGLPNAGKSTFIRQVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V G ++ F++ADIPG+I+ A GAG+G RFLKH RT Sbjct: 181 AARPKVADYPFTTLVPNLGVVDVGSHQSFVMADIPGLIEGASDGAGLGIRFLKHVARTRR 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHIV E + A Q IL+EL+ ++ EL + +I+ L++ID + ++ ++ Sbjct: 241 LLHIVDVQPIDESDPVANAQIILNELNKFSQELSQLPQILVLNKIDQIPNEQRDAVCQDI 300 Query: 297 ATQCGQV--PFEFSSITGHGIPQILECLHDKI 326 T+ G F S++TG G+ + L I Sbjct: 301 ITRLGWTGEVFYTSTLTGEGVEAVKHHLMQVI 332 >gi|326568568|gb|EGE18640.1| GTPase ObgE [Moraxella catarrhalis BC1] gi|326574080|gb|EGE24028.1| GTPase ObgE [Moraxella catarrhalis 101P30B1] gi|326576044|gb|EGE25963.1| GTPase ObgE [Moraxella catarrhalis O35E] Length = 404 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 162/332 (48%), Positives = 228/332 (68%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + +++GDGG G +SFRREKF+ GGPDGG GG+GGDV+ A N NTL+D+R Sbjct: 1 MRFIDEAVISVKAGDGGNGIVSFRREKFVPKGGPDGGDGGKGGDVYAIADDNTNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+A GE G +NRSG +D+ L VP+GT + + D +I DL ++GQ+I++A G Sbjct: 61 YTRKFEAHRGENGGSKNRSGKGADDIYLAVPIGTTIIDTDLDVVIGDLTEKGQKILIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKSSTNQAP A PG G+ + I L+LK++AD+G+IGLPNAGKSTF+ V+ Sbjct: 121 GDGGFGNTRFKSSTNQAPRKATPGFAGETRNIKLELKVVADVGLIGLPNAGKSTFIRQVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V G ++ F++ADIPG+I+ A GAG+G RFLKH RT Sbjct: 181 AARPKVADYPFTTLVPNLGVVDVGSHQSFVMADIPGLIEGASDGAGLGIRFLKHVARTRR 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHIV E + A Q IL+EL+ ++ EL + +I+ L++ID + ++ ++ Sbjct: 241 LLHIVDVQPIDESDPVANAQIILNELNKFSQELSQLPQILVLNKIDQIPNEQRDAVCQDI 300 Query: 297 ATQCGQV--PFEFSSITGHGIPQILECLHDKI 326 T+ G F S++TG G+ + L I Sbjct: 301 ITRLGWAGEVFYTSTLTGEGVEAVKHHLMQVI 332 >gi|332982081|ref|YP_004463522.1| GTP-binding protein Obg/CgtA [Mahella australiensis 50-1 BON] gi|332699759|gb|AEE96700.1| GTP-binding protein Obg/CgtA [Mahella australiensis 50-1 BON] Length = 424 Score = 288 bits (737), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 161/323 (49%), Positives = 221/323 (68%), Gaps = 8/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+Y++SGDGG G ISFRREK++ GGPDGG GG GG+V +QA N+NTL+DF+Y+ Sbjct: 2 FVDRAKIYVKSGDGGNGAISFRREKYVPRGGPDGGDGGDGGNVILQADQNMNTLMDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H+KAQ G+ G N G GED+++ VPVGT V + + +I DL +GQ+II+A GG Sbjct: 62 VHYKAQRGQHGQGSNMRGRNGEDLIIKVPVGTVVIDAESSMIIGDLINDGQQIIVAYGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHF +S Q P +A G GQE+ + L+LK+IAD+G+IG PNAGKST L+ +T A Sbjct: 122 GGKGNAHFTTSVRQTPRFAQEGEPGQERWVILELKMIADVGLIGFPNAGKSTILSIMTAA 181 Query: 183 KPKIADYPFTTLYPNLGI--VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PKIADYPFTTL PNLG+ +G + F+LADIPG+I+ AH+G G+G FL+H ERT +L Sbjct: 182 RPKIADYPFTTLSPNLGVAYAPDG-RSFVLADIPGLIEGAHEGTGLGYEFLRHVERTRLL 240 Query: 241 LHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LH+V A + V Y+ I +EL YN EL K+ +I+ +++D ++ + E Sbjct: 241 LHVVDASGMAGRDPVDDFYK-INEELRLYNEELAKRPQIILANKMDLPEAQQNFERIKEA 299 Query: 297 ATQCGQVPFEFSSITGHGIPQIL 319 A +CG F S+ G G Q+L Sbjct: 300 ADKCGYKIFAVSAAKGQGFEQVL 322 >gi|296113438|ref|YP_003627376.1| GTP-binding protein Obg/CgtA [Moraxella catarrhalis RH4] gi|295921132|gb|ADG61483.1| GTP-binding protein Obg/CgtA [Moraxella catarrhalis RH4] Length = 404 Score = 288 bits (737), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 161/332 (48%), Positives = 227/332 (68%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + +++GDGG G +SFRREKF+ GGPDGG GG+GGDV+ A N NTL+D+R Sbjct: 1 MRFIDEAVISVKAGDGGNGIVSFRREKFVPKGGPDGGDGGKGGDVYAIADDNTNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+ GE G +NRSG +D+ L VP+GT + + D +I DL ++GQ+I++A G Sbjct: 61 YTRKFEVHRGENGGSKNRSGKGADDIYLAVPIGTTIIDTDLDVVIGDLTEKGQKILIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKSSTNQAP A PG G+ + I L+LK++AD+G+IGLPNAGKSTF+ V+ Sbjct: 121 GDGGFGNTRFKSSTNQAPRKATPGFAGETRNIKLELKVVADVGLIGLPNAGKSTFIRQVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V G ++ F++ADIPG+I+ A GAG+G RFLKH RT Sbjct: 181 AARPKVADYPFTTLVPNLGVVDVGSHQSFVMADIPGLIEGASDGAGLGIRFLKHVARTRR 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHIV E + A Q IL+EL+ ++ EL + +I+ L++ID + ++ ++ Sbjct: 241 LLHIVDVQPIDESDPVANAQIILNELNKFSQELSQLPQILVLNKIDQIPNEQRDAVCQDI 300 Query: 297 ATQCGQV--PFEFSSITGHGIPQILECLHDKI 326 T+ G F S++TG G+ + L I Sbjct: 301 ITRLGWAGEVFYTSTLTGEGVESVKHHLMQVI 332 >gi|289209168|ref|YP_003461234.1| GTP-binding protein Obg/CgtA [Thioalkalivibrio sp. K90mix] gi|288944799|gb|ADC72498.1| GTP-binding protein Obg/CgtA [Thioalkalivibrio sp. K90mix] Length = 356 Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 161/330 (48%), Positives = 222/330 (67%), Gaps = 9/330 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +++GDGG G +SFRREKFI FGGPDGG GG GG VW+ LNTL DFR Sbjct: 1 MKFIDEATITVKAGDGGNGCVSFRREKFIPFGGPDGGDGGDGGSVWLIGDEGLNTLADFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ+ F AQ GE GM R R+GA GED+V+ VPVGTQV + D ++ D+ + G+R+++A G Sbjct: 61 YQRRFDAQRGENGMGRQRTGASGEDLVIPVPVGTQVRDADTDEVLGDITRHGERLLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN +KSSTNQAP + PG G+ + + L+L ++AD+G++GLPNAGKST LA + Sbjct: 121 GFHGLGNTRYKSSTNQAPRQSKPGTPGELRRLGLELMVLADVGLLGLPNAGKSTLLARAS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL P LG+V+ G + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIADYPFTTLVPQLGVVRIGPNQSFVMADIPGLIEGAAEGAGLGTRFLKHLARTRL 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQ---IDTVDSDTLARK 292 LLH+V E + A Q L EL ++ +L + + L++ +DT D L + Sbjct: 241 LLHVVDVAPPDPEADPVADMQTALGELERHSDDLASRPRWIVLNKKELLDTESLDGLIAR 300 Query: 293 KNELATQCGQVPFEFSSITGHGIPQILECL 322 E+A V F S++TG G+ +L+ + Sbjct: 301 VREVAGPERPV-FTISAVTGDGVDTLLQAV 329 >gi|330504896|ref|YP_004381765.1| GTPase ObgE [Pseudomonas mendocina NK-01] gi|328919182|gb|AEB60013.1| GTPase ObgE [Pseudomonas mendocina NK-01] Length = 406 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 164/324 (50%), Positives = 231/324 (71%), Gaps = 6/324 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE +++++GDGG G +SFRREKFIE GGP+GG GG GG V+++A NLNTLID+R Sbjct: 1 MKFVDEVSIFVKAGDGGNGMMSFRREKFIEKGGPNGGDGGDGGSVFLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F AQ+GEKG + +GAKGED++L VPVGT V + +I DL + GQR+++A G Sbjct: 61 YTRKFNAQNGEKGGSTDCTGAKGEDLILPVPVGTTVIDVATQEVIGDLVKAGQRLMVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G+ + + L+LK++AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGESRDLKLELKVLADVGLLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVDRFKSFVVADIPGLIEGASEGAGLGIRFLKHLARTRL 240 Query: 240 LLHIV--SALEENVQA-AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL-ARKKNE 295 LLH+V + L+E+ A A Q I+DEL ++ L ++ + L+++D V D ARK + Sbjct: 241 LLHLVDMAPLDESDPAEAAQVIIDELGRFSPALAERDRWLVLNKMDQVPEDEREARKADI 300 Query: 296 LATQCGQVP-FEFSSITGHGIPQI 318 +A Q P + S+I+ G +I Sbjct: 301 VARLNWQGPVYVVSAISRDGTERI 324 >gi|146308695|ref|YP_001189160.1| GTPase ObgE [Pseudomonas mendocina ymp] gi|261277684|sp|A4XYL2|OBG_PSEMY RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|145576896|gb|ABP86428.1| GTP1/OBG sub domain protein [Pseudomonas mendocina ymp] Length = 406 Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 161/324 (49%), Positives = 231/324 (71%), Gaps = 6/324 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE +++++GDGG G +SFRREKFIE GGP+GG GG GG V+++A NLNTLID+R Sbjct: 1 MKFVDEVSIFVKAGDGGNGMMSFRREKFIEKGGPNGGDGGDGGSVFLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F AQ+GEKG + +GAKGED++L VPVGT V + +I DL + GQR+++A G Sbjct: 61 YTRKFHAQNGEKGGSTDCTGAKGEDLILPVPVGTTVIDVATQEVIGDLVKPGQRLMVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G+ + + L+LK++AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGESRDLKLELKVLADVGLLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVDRFKSFVVADIPGLIEGASEGAGLGIRFLKHLARTRL 240 Query: 240 LLHIV--SALEENVQA-AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V + L+E+ A A Q I+DEL ++ L ++ + L+++D + D +K ++ Sbjct: 241 LLHLVDMAPLDESDPAEAAQVIIDELGRFSPALAERDRWLVLNKMDQIPEDEREARKADI 300 Query: 297 ATQCG-QVP-FEFSSITGHGIPQI 318 + G Q P + S+I+ G +I Sbjct: 301 VARLGWQGPVYVVSAISRDGTERI 324 >gi|158334969|ref|YP_001516141.1| GTPase ObgE [Acaryochloris marina MBIC11017] gi|261266623|sp|B0CDA2|OBG_ACAM1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|158305210|gb|ABW26827.1| GTP-binding protein, GTP1/OBG family [Acaryochloris marina MBIC11017] Length = 350 Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 146/327 (44%), Positives = 230/327 (70%), Gaps = 1/327 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+ ++++++GDGG G ++FRREK++ GGP GG+GGRGG V +QA++ L TL+DF+ Sbjct: 1 MRFIDQTEIFVKAGDGGDGMVAFRREKYVPAGGPAGGNGGRGGSVILQASTQLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+ F A+ G++G +N +GA G+D ++ VP GT +++ D ++L+ DL GQ + +A G Sbjct: 61 YKHQFVAEDGKRGGPKNLTGASGQDRLIEVPCGTVIYDADSMTLLGDLTTNGQTLTVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP +A PG+ G+E + L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GKGGLGNKHFLSNRNRAPEHALPGLPGEEFRLHLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V + + ADIPG+I+ AH+G G+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLIPNLGVVPRATGDGTVFADIPGLIEGAHEGVGLGHDFLRHVERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V A E+ + YQ I ELSAY L+ + +++ L++ID +DS+ L K+ L Sbjct: 241 LVHLVDATAEDPEQDYQTIQKELSAYGQGLQNRPQLLVLNKIDAMDSEQLLEKQACLEQM 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKI 326 G + S++ G+ +L+ + +++ Sbjct: 301 SGSPVYLISAVAQQGLDTLLQQVWEEL 327 >gi|256045445|ref|ZP_05448336.1| GTPase ObgE [Brucella melitensis bv. 1 str. Rev.1] gi|265991874|ref|ZP_06104431.1| GTPase ObgE [Brucella melitensis bv. 1 str. Rev.1] gi|263002830|gb|EEZ15233.1| GTPase ObgE [Brucella melitensis bv. 1 str. Rev.1] Length = 207 Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 148/202 (73%), Positives = 172/202 (85%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AK+YIRSG+GGAG +SFRREKF+EFGGPDGG GGRGGDVW++A LNTLID+R Sbjct: 1 MKFLDQAKIYIRSGNGGAGAVSFRREKFLEFGGPDGGDGGRGGDVWVEAVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA+ G GM RN +G KG+DVVL VPVGTQ+FEED +LICD+ + GQR LA G Sbjct: 61 YQQHFKAKTGMHGMGRNMTGGKGDDVVLRVPVGTQIFEEDNETLICDITEVGQRYRLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG G E+ IWL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNLHFTTSTNRAPRRANPGQEGIERTIWLRLKLIADAGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK 202 AKPKIADYPFTTL+PNLG+ + Sbjct: 181 AAKPKIADYPFTTLHPNLGVAR 202 >gi|260061876|ref|YP_003194956.1| GTPase ObgE [Robiginitalea biformata HTCC2501] gi|88786009|gb|EAR17178.1| GTP-binding protein [Robiginitalea biformata HTCC2501] Length = 333 Score = 285 bits (728), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 160/332 (48%), Positives = 226/332 (68%), Gaps = 6/332 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+++RSG GG G RREK++ GGPDGG GGRGG V ++ +L TL+ F+++ Sbjct: 6 FVDYVKIHLRSGKGGQGSAHLRREKYVAKGGPDGGDGGRGGHVIVRGNKDLWTLLGFKFK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HF+A HGE G ++ +GA GEDVVL VP+GT V + D + ++ ++GQ I+A GG Sbjct: 66 RHFQAGHGEHGGRQRSTGADGEDVVLEVPLGTVVKDTDSGEQLFEITEDGQEEIVAEGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSSTNQ P YA PG+ G+EK + L+LK++AD+G++G PNAGKST LA++T A Sbjct: 126 GGRGNWHFKSSTNQTPRYAQPGLPGEEKNLLLELKVLADVGLVGFPNAGKSTLLAALTSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLGIVK +K F++ADIPGII+ A +G G+G FL+H ER +LL Sbjct: 186 KPKIADYEFTTLKPNLGIVKYRDFKSFVIADIPGIIEGASEGKGLGHYFLRHIERNALLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V A +++ + YQ +L EL YN EL K ++ +S+ D +D++ EL Sbjct: 246 FLVPADSQDIASDYQVLLGELRKYNPELLDKRRLLAVSKSDLLDAELTRELDAELQNSLP 305 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFSIRGE 332 VP+ F SS++G G+ Q L D+++ + E Sbjct: 306 GVPYLFISSVSGQGLTQ----LKDQLWKLLNE 333 >gi|197124692|ref|YP_002136643.1| GTPase ObgE [Anaeromyxobacter sp. K] gi|261266656|sp|B4UIU2|OBG_ANASK RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|196174541|gb|ACG75514.1| GTP-binding protein Obg/CgtA [Anaeromyxobacter sp. K] Length = 354 Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 156/333 (46%), Positives = 223/333 (66%), Gaps = 6/333 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE K+++++GDGG G +++RREKFI GGP GG GG GGDV ++ L+TL+D+R Sbjct: 1 MKFVDEVKIHVKAGDGGDGAVAWRREKFIPRGGPAGGDGGNGGDVVLEVDPQLSTLLDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + KA++GEKG + +G G D+VL VP GT V + +CDL G+R+++A G Sbjct: 61 YIREHKARNGEKGSGSDMNGKDGADLVLRVPPGTVVKDAATGEQLCDLGAAGERVVIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN +F SSTNQAP YA G G E+ + L+LKL+AD+GI+G PNAGKST ++ ++ Sbjct: 121 GRGGLGNMNFASSTNQAPRYAEDGTPGAERDLVLELKLLADVGIVGYPNAGKSTLISRIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIADYPFTTL PNLG+V + F++ADIPG+I+ AH GAG+G +FL+H ER VL Sbjct: 181 RARPKIADYPFTTLTPNLGVVGWRERSFVVADIPGLIEGAHAGAGLGHQFLRHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILD----ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE- 295 +H+V A + LD EL+AY+ EL KK +IV +++ID ++ K + Sbjct: 241 IHLVEGANPEPGRAPRADLDAINAELAAYSDELAKKPQIVAVTKIDVPEARAAGVKLQKL 300 Query: 296 LATQCGQVPFEF-SSITGHGIPQILECLHDKIF 327 L + VP S++TG G+ +L+ + +F Sbjct: 301 LGRRKKPVPVHLVSAVTGEGLDALLDAVGRALF 333 >gi|86160596|ref|YP_467381.1| GTPase ObgE [Anaeromyxobacter dehalogenans 2CP-C] gi|123497271|sp|Q2IH84|OBG_ANADE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|85777107|gb|ABC83944.1| GTP-binding protein, HSR1-related protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 354 Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 156/333 (46%), Positives = 223/333 (66%), Gaps = 6/333 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE K+++++GDGG G +++RREKFI GGP GG GG GGDV ++ L+TL+D+R Sbjct: 1 MKFVDEVKIHVKAGDGGDGAVAWRREKFIPRGGPAGGDGGNGGDVVLEVDPQLSTLLDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + KA++GEKG + +G G D+VL VP GT V + +CDL G+R+++A G Sbjct: 61 YIREHKARNGEKGSGSDMNGKDGADLVLRVPPGTVVKDAATGEQLCDLGTAGERVVIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN +F SSTNQAP YA G G E+ + L+LKL+AD+GI+G PNAGKST ++ ++ Sbjct: 121 GRGGLGNMNFASSTNQAPRYAEDGTPGAERDLVLELKLLADVGIVGYPNAGKSTLISRIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIADYPFTTL PNLG+V + F++ADIPG+I+ AH GAG+G +FL+H ER VL Sbjct: 181 RARPKIADYPFTTLTPNLGVVGWRERSFVVADIPGLIEGAHAGAGLGHQFLRHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILD----ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE- 295 +H+V A + LD EL+AY+ EL KK +IV +++ID ++ K + Sbjct: 241 IHLVEGANPEPGRAPKADLDAINAELAAYSDELAKKPQIVAVTKIDVPEARAAGVKLQKL 300 Query: 296 LATQCGQVPFEF-SSITGHGIPQILECLHDKIF 327 L + VP S++TG G+ +L+ + +F Sbjct: 301 LGRRKKPVPVHLVSAVTGEGLDALLDAVGRALF 333 >gi|332526528|ref|ZP_08402640.1| GTPase CgtA [Rubrivivax benzoatilyticus JA2] gi|332110796|gb|EGJ10973.1| GTPase CgtA [Rubrivivax benzoatilyticus JA2] Length = 353 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 158/339 (46%), Positives = 237/339 (69%), Gaps = 7/339 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + I +G+GGAG +SFRREKFI FGGP+GG GGRGG VW A N+NTLID+R Sbjct: 1 MKFVDEATIDIAAGNGGAGCVSFRREKFIPFGGPNGGDGGRGGSVWAHADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A++GE G ++ GA GED+VL +PVGT V + D ++C+L + QR++LA G Sbjct: 61 YARRHEARNGESGRGADQFGAAGEDIVLRMPVGTIVTDLDSGEVLCELLEHDQRVLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN HFK+STN+AP PG G+ + + L+L+++AD+G++G+PNAGKST +++++ Sbjct: 121 GDGGFGNLHFKTSTNRAPRQKTPGWPGEARKVKLELRVLADVGLLGMPNAGKSTLISAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G + F++ADIPG+I+ A +GAG+G RFL+H +RT + Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVGPERSFVVADIPGLIEGASEGAGLGHRFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTL-ARKKN 294 LLHIV + +E V Q I+ EL Y+ EL K + L+++D + ++ AR K+ Sbjct: 241 LLHIVDIAPFDEGVDPVQQAKAIVAELKKYDPELHAKPRWLVLNKVDMLPAEEREARVKD 300 Query: 295 ELATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIRGE 332 + + P + S++ G+ ++E + + S + E Sbjct: 301 FVKRLRYKGPVYVISALAREGLEPLVEGIWKHVASYQQE 339 >gi|222475149|ref|YP_002563565.1| putative GTP binding protein (hflX) [Anaplasma marginale str. Florida] gi|261266621|sp|B9KIJ7|OBG1_ANAMF RecName: Full=GTPase obg 1; AltName: Full=GTP-binding protein obg 1 gi|222419286|gb|ACM49309.1| putative GTP binding protein (hflX) [Anaplasma marginale str. Florida] Length = 348 Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 151/296 (51%), Positives = 213/296 (71%), Gaps = 1/296 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DEAK++++ G GG G +SFRREKFIEFGGPDGG+GG GG V A+S +NTL+ FR Sbjct: 1 MSFVDEAKIHVKGGKGGDGCVSFRREKFIEFGGPDGGNGGNGGSVIFVASSAVNTLLYFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QH +A++G+ G + + GA G + V+ VPVGTQ+++EDG +LI DL+ GQ+ +A G Sbjct: 61 YNQHIRAENGKAGSGKGKFGAAGRNRVVEVPVGTQLYDEDGNTLIADLNNIGQQYTVAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA +KSSTN+AP Y G LG+E + LKLK+++D+GIIG+PNAGKS+ L+ T Sbjct: 121 GRGGIGNAQYKSSTNRAPTYFTYGTLGEEHCVLLKLKIVSDVGIIGMPNAGKSSLLSRCT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +K K++DYPFTTL P+LG+ E +LADIPG+I+NA GAG+G +FLKH ER +L Sbjct: 181 ASKTKVSDYPFTTLEPHLGVAYANGCELVLADIPGLIENASSGAGLGHKFLKHIERCVIL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LH+V ++ +AY+ + EL ++ EL K E+V L++ D + S+ R+K +L Sbjct: 241 LHLVDCSLPDIVSAYELVRQELKLHSQELTGKQEVVILNKCDLL-SEGEVREKQKL 295 >gi|90020657|ref|YP_526484.1| GTPase ObgE [Saccharophagus degradans 2-40] gi|123396467|sp|Q21M07|OBG_SACD2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|89950257|gb|ABD80272.1| GTP1/OBG subdomain [Saccharophagus degradans 2-40] Length = 402 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 159/330 (48%), Positives = 236/330 (71%), Gaps = 10/330 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA +++ +G GG G +SFRREKFIE GGPDGG GG GG V+++A NLNTL+D+R Sbjct: 1 MKFVDEAPIFVHAGKGGNGCMSFRREKFIEKGGPDGGDGGDGGSVYLEADENLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ+ F+AQ GE G RN +GAKGED++L VPVGT V + + +I DL + G R+++A G Sbjct: 61 YQRSFRAQSGEGGRGRNCTGAKGEDLILPVPVGTSVIDMETEEVIGDLTKAGDRLLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSS N+AP PG G+++ I L+LK++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GFHGLGNARFKSSVNRAPRQTKPGSEGEDRQIKLELKVLADVGMLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL P+LG+VK + ++ F++ADIPG+I+ A GAG+G RFLKH R + Sbjct: 181 SAEPKVADYPFTTLVPSLGVVKVQTHRSFVVADIPGLIEGASDGAGLGIRFLKHLTRCRI 240 Query: 240 LLHI--VSALEEN--VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLA---RK 292 L+H+ V+ ++E+ V++A + I+DE++ ++ L ++ + L++ DT+ D +A R+ Sbjct: 241 LIHLVDVNPIDESSPVESA-RAIVDEINKFSPTLAQRERWLVLNKCDTLSEDEVAEVERQ 299 Query: 293 KNELATQCGQVPFEFSSITGHGIPQILECL 322 E G + ++ ++I+ G Q+ E L Sbjct: 300 IREALNWVGPI-YKIAAISNTGTAQLCEKL 328 >gi|58698889|ref|ZP_00373756.1| GTP-binding protein, GTP1/OBG family [Wolbachia endosymbiont of Drosophila ananassae] gi|225630077|ref|YP_002726868.1| GTP-binding protein [Wolbachia sp. wRi] gi|225677412|ref|ZP_03788379.1| GTP-binding protein [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|261277748|sp|C0R5N5|OBG_WOLWR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|58534598|gb|EAL58730.1| GTP-binding protein, GTP1/OBG family [Wolbachia endosymbiont of Drosophila ananassae] gi|225590556|gb|EEH11816.1| GTP-binding protein [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225592058|gb|ACN95077.1| GTP-binding protein [Wolbachia sp. wRi] Length = 340 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 160/326 (49%), Positives = 223/326 (68%), Gaps = 2/326 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+ +++GDGG G SFRREKF+EFGGP+GG+GG+GG++ + +NLNTL+ FR Sbjct: 1 MGFIDEVKLCLKAGDGGDGCASFRREKFVEFGGPNGGNGGKGGNIVFISDANLNTLLHFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++H KA G+ G R+RSG G+DV+L VPVG Q+ +E+ +I DLD+ G +A G Sbjct: 61 YRRHIKADSGKNGAGRDRSGTAGKDVILKVPVGAQIIDEESEEIIVDLDKPGMEFQVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN +FKSSTN+AP + G G+EK + LKLK+++D+GIIG+PNAGKS FL + Sbjct: 121 GKGGLGNTNFKSSTNKAPRHFTYGQPGEEKHVLLKLKVLSDVGIIGMPNAGKSKFLTRCS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 + K+ DYPFTT+ P+LG+VK E ++ADIPGII +AH G G+G +FLKH ER +L Sbjct: 181 NSDTKVGDYPFTTVRPHLGMVKVDDSEVVIADIPGIITDAHLGVGLGHKFLKHIERCQIL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ ++V +AY CI +EL YNS+L +K EIV L++ D + + KKN LA Sbjct: 241 LHLIDVTHDDVVSAYSCIHNELELYNSDLVEKEEIVVLNKCDLLREAEILEKKNHLANYL 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 + SI G P IL L +K+ Sbjct: 301 NKEVLCL-SINGDLQP-ILRLLSEKL 324 >gi|67925538|ref|ZP_00518871.1| GTP-binding protein, HSR1-related:GTP1/OBG subdomain [Crocosphaera watsonii WH 8501] gi|67852615|gb|EAM48041.1| GTP-binding protein, HSR1-related:GTP1/OBG subdomain [Crocosphaera watsonii WH 8501] Length = 350 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 149/335 (44%), Positives = 228/335 (68%), Gaps = 1/335 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D A++ + G GG G I+FRREK++ GGP GG+GG+GG V +QA NL TL+DFR Sbjct: 1 MQFIDRAEIEVEGGKGGDGIIAFRREKYVPAGGPAGGNGGKGGSVILQAEGNLQTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + FKA +G++G N +GA G+D+++ VP GT +++ + ++ DL ++GQ + +A G Sbjct: 61 YARRFKADNGKRGGPNNCTGAMGKDIIIEVPCGTVIYDLETQEMLGDLVEQGQTLCVAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP YA PG+ G+ + + L+LKL+A++GIIGLPNAGKST +AS++ Sbjct: 121 GKGGLGNKHFLSNKNRAPEYALPGLEGELRNLRLELKLLAEVGIIGLPNAGKSTLIASLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V++ + + ADIPG+I AH+G G+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRKPTGDGTVFADIPGLIAGAHEGVGLGHEFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH+V ++ Y+ I EL+AY L + +I+ L+++D D +TL K EL Sbjct: 241 LLHLVDVTSDDPLQDYEVIQQELNAYGRGLCDRPQIIALNKVDACDQETLKLIKEELQPL 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 F S++T G+ ++L+ + +++ + +E Sbjct: 301 SDSPVFTISAVTKTGVAELLQAIWNRLEQVNLNDE 335 >gi|193214401|ref|YP_001995600.1| GTPase ObgE [Chloroherpeton thalassium ATCC 35110] gi|261266728|sp|B3QVU6|OBG_CHLT3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|193087878|gb|ACF13153.1| GTP-binding protein Obg/CgtA [Chloroherpeton thalassium ATCC 35110] Length = 333 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 153/321 (47%), Positives = 224/321 (69%), Gaps = 5/321 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+Y+++GDGG G +SFR EKF+ GGPDGG GG GG ++++A +NL TL+DFRYQ Sbjct: 2 FIDSAKIYVKAGDGGKGCVSFRHEKFVPKGGPDGGDGGTGGSIFVKADANLATLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KA+ GE G ++G +DV++ VPVGT V + + + DL GQ +++A GG+ Sbjct: 62 RHYKAERGEHGQGSRKTGRSAKDVIIKVPVGTIVKDSETGEPLADLVYAGQEVLIAKGGH 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + TN+AP Y+ P +G+E+ I L+LKL+ADIG++G PNAGKST +++++ A Sbjct: 122 GGKGNQHFATPTNRAPRYSEPAGVGEERNIDLELKLLADIGLVGFPNAGKSTLISTISAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+YPFTTL PNLGIV+ Y+ F++ADIPGII+ A +G G+G +FLKH ERT VL Sbjct: 182 RPKIANYPFTTLEPNLGIVRYAEYQSFVVADIPGIIEGASEGKGLGLKFLKHIERTKVLA 241 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A E+VQA Y +++EL ++ L K IV LS++D V D E+ G Sbjct: 242 ILIPADTEDVQAEYDTLIEELRKFDESLCLKPRIVVLSKMDLVLEDA----SFEVPAFEG 297 Query: 302 QVPFEFSSITGHGIPQILECL 322 + + SS+TG G+ ++ + L Sbjct: 298 EKVVQISSVTGTGLQELKDVL 318 >gi|56416786|ref|YP_153860.1| GTPase ObgE [Anaplasma marginale str. St. Maries] gi|81599154|sp|Q5PAS5|OBG1_ANAMM RecName: Full=GTPase obg 1; AltName: Full=GTP-binding protein obg 1 gi|56388018|gb|AAV86605.1| GTP-binding protein [Anaplasma marginale str. St. Maries] Length = 348 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 151/296 (51%), Positives = 213/296 (71%), Gaps = 1/296 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DEAK++++ G GG G +SFRREKFIEFGGPDGG+GG GG V A+S +NTL+ FR Sbjct: 1 MSFVDEAKIHVKGGKGGDGCVSFRREKFIEFGGPDGGNGGNGGSVIFIASSAVNTLLYFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QH +A++G+ G + + GA G + V+ VPVGTQ+++EDG +LI DL+ GQ+ +A G Sbjct: 61 YNQHIRAENGKAGSGKGKFGAAGRNRVVEVPVGTQLYDEDGNTLIADLNNIGQQYTVAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA +KSSTN+AP Y G LG+E + LKLK+++D+GIIG+PNAGKS+ L+ T Sbjct: 121 GRGGIGNAQYKSSTNRAPTYFTYGTLGEEHCVLLKLKIVSDVGIIGMPNAGKSSLLSRCT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +K K++DYPFTTL P+LG+ E +LADIPG+I+NA GAG+G +FLKH ER +L Sbjct: 181 ASKTKVSDYPFTTLEPHLGVAYANGCELVLADIPGLIENASSGAGLGHKFLKHIERCVIL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LH+V ++ +AY+ + EL ++ EL K E+V L++ D + S+ R+K +L Sbjct: 241 LHLVDCSLPDIVSAYELVRQELKLHSQELAGKQEVVILNKCDLL-SEGEVREKQKL 295 >gi|58697550|ref|ZP_00372789.1| GTP-binding protein [Wolbachia endosymbiont of Drosophila simulans] gi|58535967|gb|EAL59693.1| GTP-binding protein [Wolbachia endosymbiont of Drosophila simulans] Length = 298 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 152/298 (51%), Positives = 212/298 (71%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+ +++GDGG G SFRREKF+EFGGP+GG+GG+GG++ + +NLNTL+ FR Sbjct: 1 MGFIDEVKLCLKAGDGGDGCASFRREKFVEFGGPNGGNGGKGGNIVFISDANLNTLLHFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++H KA G+ G R+RSG G+DV+L VPVG Q+ +E+ +I DLD+ G +A G Sbjct: 61 YRRHIKADSGKNGAGRDRSGTAGKDVILKVPVGAQIIDEESEEIIVDLDKPGMEFQVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN +FKSSTN+AP + G G+EK + LKLK+++D+GIIG+PNAGKS FL + Sbjct: 121 GKGGLGNTNFKSSTNKAPRHFTYGQPGEEKHVLLKLKVLSDVGIIGMPNAGKSKFLTRCS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 + K+ DYPFTT+ P+LG+VK E ++ADIPGII +AH G G+G +FLKH ER +L Sbjct: 181 NSDTKVGDYPFTTVRPHLGMVKVDDSEVVIADIPGIITDAHLGVGLGHKFLKHIERCQIL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 LH++ ++V +AY CI +EL YNS+L +K EIV L++ D + + KKN LA Sbjct: 241 LHLIDVTHDDVVSAYSCIHNELELYNSDLVEKEEIVVLNKCDLLREAEILEKKNHLAN 298 >gi|88606806|ref|YP_505276.1| GTPase ObgE [Anaplasma phagocytophilum HZ] gi|123495027|sp|Q2GK25|OBG_ANAPZ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|88597869|gb|ABD43339.1| GTP-binding protein, GTP1/Obg family [Anaplasma phagocytophilum HZ] Length = 352 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 152/296 (51%), Positives = 221/296 (74%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DEAKV+++ G+GG G +SFRREK+IEFGGPDGG+GG GG V ++A+S +NTL+ FR Sbjct: 1 MSFIDEAKVFVKGGNGGNGCVSFRREKYIEFGGPDGGNGGDGGSVILEASSAVNTLLFFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QH +A++G+ G + +SGA G D+V+ VP+GTQVF+ G SLI DL GQR ++A G Sbjct: 61 YHQHLRAENGKSGSGKKKSGASGRDLVIKVPIGTQVFDSPGGSLIADLSTVGQRYVVASG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA +KSSTN+AP Y G + +E I+++LK+++DIGIIG+PNAGKS+ L+ T Sbjct: 121 GKGGVGNAQYKSSTNRAPVYYTLGAVEEEFPIFMQLKVLSDIGIIGMPNAGKSSLLSRCT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +K K+ADYPFTTL P+LG+ + + ILADIPG+I+NA++GAG+G +FLKH ER +L Sbjct: 181 MSKTKVADYPFTTLEPHLGVARINEYDLILADIPGLIENANEGAGLGHKFLKHIERCSLL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LH++ E++ AY+ + EL+ Y+ EL +K E++ L++ D + + + +KK+ L Sbjct: 241 LHLIDGSTEDIVGAYKLVSRELAMYSKELSEKREVIVLNKCDMITEEEIVQKKHLL 296 >gi|220919412|ref|YP_002494716.1| GTP-binding protein Obg/CgtA [Anaeromyxobacter dehalogenans 2CP-1] gi|261266654|sp|B8JBP2|OBG_ANAD2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|219957266|gb|ACL67650.1| GTP-binding protein Obg/CgtA [Anaeromyxobacter dehalogenans 2CP-1] Length = 354 Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 155/333 (46%), Positives = 223/333 (66%), Gaps = 6/333 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE K+++++GDGG G +++RREKFI GGP GG GG GGDV ++ L+TL+D+R Sbjct: 1 MKFVDEVKIHVKAGDGGDGAVAWRREKFIPRGGPAGGDGGNGGDVVLEVDPQLSTLLDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + KA++GEKG + +G G D+VL VP GT V + +CDL G+R+++A G Sbjct: 61 YIREHKARNGEKGSGSDMNGKDGADLVLRVPPGTVVKDAATGEQLCDLGAAGERVVIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN +F SSTNQAP YA G G E+ + L+LKL+AD+GI+G PNAGKST ++ ++ Sbjct: 121 GRGGLGNMNFASSTNQAPRYAEDGTPGAERDLVLELKLLADVGIVGYPNAGKSTLISRIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIADYPFTTL PNLG+V + F++ADIPG+I+ AH GAG+G +FL+H ER VL Sbjct: 181 RARPKIADYPFTTLTPNLGVVGWRERSFVVADIPGLIEGAHAGAGLGHQFLRHVERCRVL 240 Query: 241 LHIVSALEENVQAAYQCILD----ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE- 295 +H+V A + LD EL+AY+ EL +K +IV +++ID ++ K + Sbjct: 241 IHLVEGANPEPGRAPKPDLDAINAELAAYSDELARKPQIVAVTKIDVPEARAAGVKLQKL 300 Query: 296 LATQCGQVPFEF-SSITGHGIPQILECLHDKIF 327 L + VP S++TG G+ +L+ + +F Sbjct: 301 LGRRKKPVPVHLVSAVTGEGLDALLDAVGRALF 333 >gi|42520361|ref|NP_966276.1| GTPase ObgE [Wolbachia endosymbiont of Drosophila melanogaster] gi|81652628|sp|Q73HQ3|OBG_WOLPM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|42410099|gb|AAS14210.1| GTP-binding protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 340 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 160/326 (49%), Positives = 222/326 (68%), Gaps = 2/326 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+ +++GDGG G SFRREKF+EFGGP+GG+GG+GG++ + +NLNTL+ FR Sbjct: 1 MGFIDEVKLCLKAGDGGDGCASFRREKFVEFGGPNGGNGGKGGNIVFISDANLNTLLHFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++H KA G+ G R+RSG G+DV+L VPVG Q+ +E+ +I DLD+ G +A G Sbjct: 61 YRRHIKADSGKNGAGRDRSGTAGKDVILKVPVGAQIIDEESEEIIVDLDKPGMEFQVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN +FKSSTN+AP + G G+EK + LKLK+++D+GIIG+PNAGKS FL + Sbjct: 121 GKGGLGNTNFKSSTNKAPRHFTYGQPGEEKHVLLKLKVLSDVGIIGMPNAGKSKFLTRCS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 + K+ DYPFTT+ P+LG+VK E ++ADIPGII +AH G G+G +FLKH ER +L Sbjct: 181 NSDTKVGDYPFTTVRPHLGMVKVDDSEVVIADIPGIITDAHLGVGLGHKFLKHIERCQIL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 LH++ ++V AY CI +EL YNS+L +K EIV L++ D + + KKN LA Sbjct: 241 LHLIDVTHDDVVLAYSCIHNELELYNSDLVEKEEIVVLNKCDLLREAEILEKKNHLANYL 300 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 + SI G P IL L +K+ Sbjct: 301 NKEVLCL-SINGDLQP-ILRLLSEKL 324 >gi|292490242|ref|YP_003525681.1| GTP-binding protein Obg/CgtA [Nitrosococcus halophilus Nc4] gi|291578837|gb|ADE13294.1| GTP-binding protein Obg/CgtA [Nitrosococcus halophilus Nc4] Length = 341 Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 156/333 (46%), Positives = 229/333 (68%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +++G GG G +SFRREKFI FGGPDGG+GG GG +++ A NLNTL+DFR Sbjct: 1 MKFIDEAIIKVQAGAGGNGCLSFRREKFIPFGGPDGGNGGNGGSIYLIADKNLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+H++AQ GE G R ++G GED+ + VPVGT+ +E D L+ DL + Q +++A G Sbjct: 61 HQRHYRAQRGENGRGRLQTGKSGEDLYIRVPVGTEAWEADTEELLGDLTRPQQTLLIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNAHFKSSTN+AP G G+E+ + L+LKL+AD+G++GLPNAGKSTF+ + Sbjct: 121 GTRGLGNAHFKSSTNRAPRKTTEGKPGEERTLRLELKLLADVGLLGLPNAGKSTFIRQTS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTLYP+LG+V + + F++ADIPG+I+ A QGAG+G RFLKH RT + Sbjct: 181 AATPKVADYPFTTLYPHLGVVSIDSNRSFVMADIPGVIEGAAQGAGLGIRFLKHLSRTRL 240 Query: 240 LLHI--VSALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+ V+ +E + A + I EL ++ EL K+ + + L++ID + A + E Sbjct: 241 LLHLVDVAPMEPAMDPVANVRTIQGELQQFSPELAKRPQWLVLNKIDLIPPSEQAERCQE 300 Query: 296 LATQCG-QVP-FEFSSITGHGIPQILECLHDKI 326 + + Q P ++ S++TG G ++ + + + Sbjct: 301 ILNRLAWQGPVYQISALTGEGCQPLIRAVMEYL 333 >gi|294012710|ref|YP_003546170.1| putative GTP-binding protein [Sphingobium japonicum UT26S] gi|292676040|dbj|BAI97558.1| putative GTP-binding protein [Sphingobium japonicum UT26S] Length = 363 Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 166/338 (49%), Positives = 226/338 (66%), Gaps = 16/338 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M FLD+AK+YI+SG GG G +SFRREK++E+GGPDGG+GG+GGD+ +A + LNTLIDFR Sbjct: 1 MHFLDQAKIYIKSGWGGPGAVSFRREKYVEYGGPDGGNGGKGGDIIFEAVAGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVF----------EEDGI-----SLI 105 Y QHFKAQ G G +NR GA GED+V+ VPVGTQ+ +EDG L+ Sbjct: 61 YTQHFKAQRGMPGAGKNRYGAGGEDLVIKVPVGTQILSDPTPIEGTEDEDGTMEYEQELL 120 Query: 106 CDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGII 165 D Q GQRI+L GG+GG GN +K+STN+AP G GQE +WL+LKL+AD+G++ Sbjct: 121 ADFTQVGQRIVLLRGGDGGRGNLSYKTSTNRAPRQHGTGWPGQEMWVWLRLKLLADVGLV 180 Query: 166 GLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAG 225 G+PNAGKSTF+ VT K K+ Y FTT P LG+V +EF+LADIPG+I+ A +GAG Sbjct: 181 GMPNAGKSTFINQVTNTKAKVGAYAFTTTKPQLGVVLHRDREFVLADIPGLIEGAAEGAG 240 Query: 226 IGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 IGDRFL H ER VLLH++ A ++ ++ + DEL+AY L +K +IV L++ D + Sbjct: 241 IGDRFLGHVERCRVLLHLIDATGDDPVEQFRIVQDELAAYGGGLDEKPQIVALNKGDLLG 300 Query: 286 SDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECL 322 + + +L + G + F S TG G+P +L+ + Sbjct: 301 PELMEDIAGQLRDEAGVEDVFIISGATGEGVPALLDAV 338 >gi|115372327|ref|ZP_01459636.1| GTP-binding protein, GTP1/OBG family [Stigmatella aurantiaca DW4/3-1] gi|310819546|ref|YP_003951904.1| GTP-binding protein Obg/CgtA [Stigmatella aurantiaca DW4/3-1] gi|115370540|gb|EAU69466.1| GTP-binding protein, GTP1/OBG family [Stigmatella aurantiaca DW4/3-1] gi|309392618|gb|ADO70077.1| GTP-binding protein Obg/CgtA [Stigmatella aurantiaca DW4/3-1] Length = 446 Score = 282 bits (721), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 156/339 (46%), Positives = 223/339 (65%), Gaps = 17/339 (5%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE ++++++GDGG G +SFRREKFIE GGP+GG GG GG V A L TL+DFR Sbjct: 1 MKFVDEVRIFVKAGDGGNGAVSFRREKFIERGGPNGGDGGNGGSVVFVADPQLTTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQH +A+ GE GM + +G ED++L VPVGT + D L+ DL + GQR + A G Sbjct: 61 YQQHHRAKSGENGMGSDCNGRGAEDMILRVPVGTLIRSTDSGDLLVDLSEPGQRFVAAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN +F +ST Q P +A G G+E + L+LKL+AD+G++G PNAGKSTF++ V+ Sbjct: 121 GRGGLGNMNFATSTRQTPRFAQDGTKGEEVTLTLELKLLADVGLLGFPNAGKSTFISRVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE---FILADIPGIIKNAHQGAGIGDRFLKHTERT 237 RA+PK+ADYPFTTL PNLG+V+ YK+ F++ADIPGII+ A +G G+G +FL+H ER Sbjct: 181 RARPKVADYPFTTLVPNLGMVQ--YKDNLSFVMADIPGIIEGASEGVGLGHQFLRHVERC 238 Query: 238 HVLLHIVSALEE----NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 VL+H++ E + + EL Y++EL +K ++V +++D T AR++ Sbjct: 239 KVLIHLIDMGAEGEGREPLHDFDILNRELEKYSAELARKPQVVAANKVDL----THARER 294 Query: 294 NELATQC----GQVPFEFSSITGHGIPQILECLHDKIFS 328 E TQ G F S+ TG G+ +L+ + +F+ Sbjct: 295 LEALTQALRERGIAVFPVSTATGEGMQALLDATAEVLFT 333 >gi|225873753|ref|YP_002755212.1| GTP-binding protein Obg/CgtA [Acidobacterium capsulatum ATCC 51196] gi|261266640|sp|C1F9K2|OBG_ACIC5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|225793943|gb|ACO34033.1| GTP-binding protein Obg/CgtA [Acidobacterium capsulatum ATCC 51196] Length = 343 Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 159/342 (46%), Positives = 230/342 (67%), Gaps = 11/342 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DEAK+ +++GDGG G ++FRREKF+ GGP GG GGRGGD+ +++T NTL+ FRY Sbjct: 2 FIDEAKIRVKAGDGGNGCMAFRREKFVPRGGPSGGDGGRGGDIVMESTQRHNTLLYFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 KA+ GE GM N +G G+D++L VPVGT V+ + L+ D Q +R+I+A GG Sbjct: 62 PEHKAERGEHGMGSNCTGRDGKDIILKVPVGTVVYNAESGELLHDFQQPDERLIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST+QAP G G+E + L+LK++ADIGI+G PN GKST ++ ++ A Sbjct: 122 GGRGNQHFATSTHQAPREHEMGYPGEEFTLRLELKVLADIGIVGYPNVGKSTLISRISAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG----YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 KPKIADYPFTTL PNLG+V G + F++ADIPG+I+ AH+GAG+GDRFL+H ERTH Sbjct: 182 KPKIADYPFTTLEPNLGVVTVGEMPHEETFVVADIPGLIEGAHEGAGLGDRFLRHVERTH 241 Query: 239 VLLHIVSALEENVQ----AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 +L+H+V + + + A Y+ I EL+ + EL K IV S+ID+V+ D L KK Sbjct: 242 LLVHLVDVSDASGRPDPVADYKTIAAELANFGGELEDKPVIVVASKIDSVNPDKL--KKL 299 Query: 295 ELATQCGQVPF-EFSSITGHGIPQILECLHDKIFSIRGENEF 335 + ++PF E S++TG G+ Q+ + +++ +R + + Sbjct: 300 AAMAKRRKLPFYEISAVTGQGVQQLKYAMAERVRELRKQTQI 341 >gi|307151387|ref|YP_003886771.1| GTP-binding protein Obg/CgtA [Cyanothece sp. PCC 7822] gi|306981615|gb|ADN13496.1| GTP-binding protein Obg/CgtA [Cyanothece sp. PCC 7822] Length = 335 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 150/327 (45%), Positives = 225/327 (68%), Gaps = 1/327 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ + G GG G ++FRREK++ GGP GG+GGRGG V + A +L TL+DF+ Sbjct: 1 MQFIDQAEIEVEGGKGGDGIVAFRREKYVPAGGPSGGNGGRGGSVILVAVEHLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HFKA G++G NR+GA G+D ++ VP+GT V++ + ++ DL + Q++ +A G Sbjct: 61 YSRHFKADDGKRGGPSNRTGANGQDRLIQVPLGTMVYDAETEEILGDLVDKEQKLCIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP YA PG+ G+ + I L+LKL+A +GIIGLPNAGKST +++V+ Sbjct: 121 GKGGLGNQHFLSNQNRAPEYALPGLEGEHRHIRLELKLLAQVGIIGLPNAGKSTLISAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V++ + + ADIPG+I+ AH+G G+G FL+H ERT + Sbjct: 181 SARPKIADYPFTTLVPNLGVVRKPTGDGTVFADIPGLIEGAHEGVGLGYDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH+V ++ YQ I EL+AY L + +I+GL+++D +D R K++LA Sbjct: 241 LLHLVDLTADDPINDYQIIQQELAAYGRGLIDRPQIIGLNKLDAIDESVALRVKDDLAQL 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKI 326 F S + G+ Q+L+ + DK+ Sbjct: 301 TQDPVFMISGVARIGLEQLLQAVWDKL 327 >gi|298492392|ref|YP_003722569.1| GTP-binding protein Obg/CgtA ['Nostoc azollae' 0708] gi|298234310|gb|ADI65446.1| GTP-binding protein Obg/CgtA ['Nostoc azollae' 0708] Length = 350 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 157/325 (48%), Positives = 226/325 (69%), Gaps = 7/325 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A + + SG GG G ++FRREK+I GGP GG+GGRGG V +A NL TL+DFR Sbjct: 1 MQFIDQALIEVESGKGGDGIVAFRREKYIPTGGPSGGNGGRGGSVIFKAVENLQTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+ FKA +G +G N +GA G+D+++ VP GT +++E+ +++ DL Q Q ++A G Sbjct: 61 YKHMFKADNGGRGGPNNCTGASGKDLIIEVPCGTVIYDEETNAILGDLIQPEQTCLIAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP YA PG+ G+ K++ L+LKL+A++GIIGLPNAGKST ++S++ Sbjct: 121 GKGGLGNQHFLSNRNRAPEYALPGLEGERKMLRLELKLLAEVGIIGLPNAGKSTLISSLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PKIADYPFTTL PNLG+V++ + + ADIPG+I+ A GAG+G FL+H ERT V Sbjct: 181 AATPKIADYPFTTLIPNLGVVRKPTGDGTVFADIPGLIEGASHGAGLGHDFLRHIERTRV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ A E+V Y I EL AY L K+ +I+ L++ID VD++T+ + ELA Q Sbjct: 241 LLHLIDATSEDVIGDYHTIQKELKAYRRGLEKRPQILALNKIDAVDTETVDLE--ELARQ 298 Query: 300 CGQVP----FEFSSITGHGIPQILE 320 Q+ F S++T G+ +L+ Sbjct: 299 FNQLSYAPVFIISAVTRTGLEPMLQ 323 >gi|218442147|ref|YP_002380476.1| GTPase ObgE [Cyanothece sp. PCC 7424] gi|261266813|sp|B7KIC1|OBG_CYAP7 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|218174875|gb|ACK73608.1| GTP-binding protein Obg/CgtA [Cyanothece sp. PCC 7424] Length = 338 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 150/329 (45%), Positives = 227/329 (68%), Gaps = 1/329 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ +++G GG G ++FRREK++ GGP GG+GGRGG V + A +L TL+DFR Sbjct: 1 MQFIDQAEIEVQAGKGGDGIVAFRREKYVPAGGPSGGNGGRGGSVILVAVEHLQTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HFKA+ G++G N +GA G D ++ VP GT +++ D +I DL QR+ +A G Sbjct: 61 YSRHFKAEDGKRGGPNNCTGANGSDRIIEVPRGTMIYDADTEEIIGDLVDNEQRLCIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP YA PG+ G+ + I L+LKL+A++GIIGLPNAGKST +++++ Sbjct: 121 GKGGLGNQHFLSNKNRAPEYALPGLEGEHRRIRLELKLLAEVGIIGLPNAGKSTLISALS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V++ + + ADIPG+I+ AH+G G+G FL+H ERT + Sbjct: 181 SARPKIADYPFTTLIPNLGVVRKPTGDGTVFADIPGLIEGAHEGVGLGYDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH+V E+ YQ I EL AY L + +I+GL+++D VD + + +N+L+ Sbjct: 241 LLHLVDLTAEDPIKDYQIIQQELEAYGRGLIDRPQIIGLNKLDAVDETVVTQIENDLSQI 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFS 328 F+ S++ G+ Q+L+ +++ S Sbjct: 301 TSDPIFKISAVARIGLDQMLQATWEQLDS 329 >gi|220936365|ref|YP_002515264.1| GTP-binding protein Obg/CgtA [Thioalkalivibrio sp. HL-EbGR7] gi|261277728|sp|B8GQQ3|OBG_THISH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|219997675|gb|ACL74277.1| GTP-binding protein Obg/CgtA [Thioalkalivibrio sp. HL-EbGR7] Length = 347 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 154/329 (46%), Positives = 223/329 (67%), Gaps = 7/329 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +++GDGG G +SFRREKF+ FGGPDGG GG GG V++ AT +LNTL DFR Sbjct: 1 MKFVDEATIKVKAGDGGNGCVSFRREKFVPFGGPDGGDGGDGGSVYLVATHDLNTLADFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+H++AQ GE G RN +GA G D+ + VPVGT ++ + LI DL + GQR+++A G Sbjct: 61 FQRHYEAQRGENGSGRNMTGASGADLEVPVPVGTLAYDAETEELIGDLVEHGQRLLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN +K+STN+AP + PG G+ +++ L+LKL+AD+G++GLPNAGKST + V+ Sbjct: 121 GFHGLGNTRYKTSTNRAPRQSKPGTPGELRVLRLELKLLADVGLLGLPNAGKSTLITQVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTLYP LG+V+ G + F++ADIPG+I+ A +GAG+G +FLKH RT + Sbjct: 181 GARPKIADYPFTTLYPGLGVVRVGPLQSFVMADIPGLIEGAAEGAGLGIQFLKHLSRTRL 240 Query: 240 LLHIVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V E+ AA I EL ++ +L + + L++ID + D E Sbjct: 241 LLHLVDVAPADPAEDPVAAVHTIEAELQQFSEDLASRPRWLVLNKIDLIAPDERESFTKE 300 Query: 296 LATQCG-QVP-FEFSSITGHGIPQILECL 322 L + G + P + S+ TG +++ + Sbjct: 301 LVARLGWEGPVYAISAATGEACESLMQAI 329 >gi|300702986|ref|YP_003744588.1| GTPase [Ralstonia solanacearum CFBP2957] gi|299070649|emb|CBJ41944.1| GTPase involved in cell partioning and DNA repair [Ralstonia solanacearum CFBP2957] Length = 366 Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 157/337 (46%), Positives = 231/337 (68%), Gaps = 7/337 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG VW A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGNGSASMRREKFVPFGGPDGGDGGRGGSVWAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + A++GE G + GA G+D+ L +PVGT +++ D LI DL +GQR+ LA G Sbjct: 61 FAKKHLARNGENGRGADCYGAAGDDITLRMPVGTAIYDADTDELIADLTLDGQRLCLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HFKSSTN+AP G G+ + + L+LK++AD+G++G+PNAGKST + +++ Sbjct: 121 GEGGWGNIHFKSSTNRAPRQKTDGKPGERRNLRLELKVLADVGLLGMPNAGKSTLITAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT V Sbjct: 181 NARPKIADYPFTTLHPNLGVVRAGPSKSFVVADIPGLIEGAAEGAGLGHQFLRHLQRTRV 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL-ARKKN 294 LLH+V + +E++ A + I+ EL Y++EL K + L+++D V D AR K+ Sbjct: 241 LLHVVDLAPFDESIDPVAEAKAIVGELKKYDAELYDKPRWLVLNKLDMVPEDEREARVKD 300 Query: 295 ELATQCGQVPF-EFSSITGHGIPQILECLHDKIFSIR 330 + + P S++T G P ++ + D + ++R Sbjct: 301 FIKRFKWKGPVHRISALTHDGCPGLVHAIQDYLDTLR 337 >gi|22299896|ref|NP_683143.1| GTPase ObgE [Thermosynechococcus elongatus BP-1] gi|81844815|sp|Q8DGG4|OBG_THEEB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|22296081|dbj|BAC09905.1| GTP-binding protein [Thermosynechococcus elongatus BP-1] Length = 333 Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 157/327 (48%), Positives = 228/327 (69%), Gaps = 1/327 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D A++++++G GG G I+FRREK++ GGP GG+GG GG V ++A SNL TL+DFR Sbjct: 1 MQFIDLAEIHVKAGKGGDGIIAFRREKYVPAGGPSGGNGGNGGSVILKAVSNLQTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y FKA++G++G NR+GA G D+V+ VP GT V++ + L+ DL GQ +++A G Sbjct: 61 YAHVFKAENGQRGGPNNRTGACGADLVIEVPCGTMVWDAETGELLGDLTTPGQTLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ +AP YA PG+ G+E+ + L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GKGGLGNKHFLSNHQRAPDYALPGLEGEERHLRLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V++ + + ADIPG+I AH G G+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRQPNGDGTVFADIPGLIAGAHTGLGLGHEFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ A E+V AAYQ I DEL AY L + +IV L++ID +D+ + + LA Sbjct: 241 LLHLIDATAEDVVAAYQTIRDELVAYGHGLGDRPQIVALNKIDALDASQITTLQETLAAY 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKI 326 GQ F S++ G+ +LE + ++ Sbjct: 301 VGQRVFAISAVARQGLEPLLEAVWQEL 327 >gi|206900232|ref|YP_002251009.1| spo0B-associated GTP-binding protein [Dictyoglomus thermophilum H-6-12] gi|261266765|sp|B5YEQ1|OBG_DICT6 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|206739335|gb|ACI18393.1| spo0B-associated GTP-binding protein [Dictyoglomus thermophilum H-6-12] Length = 435 Score = 278 bits (712), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 150/324 (46%), Positives = 221/324 (68%), Gaps = 4/324 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+Y+++GDGG G ++FRREKF+ GGP GG GG+GGDV I+A NL+TL+DF Y+ Sbjct: 2 FIDRAKIYVKAGDGGNGCVAFRREKFVPRGGPAGGDGGKGGDVIIEADENLDTLLDFHYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+ A+ GE G +N+ G GED+++ VP GT +F+ + LI DL GQR+++A GG Sbjct: 62 RHYYAERGEHGKGKNQKGKDGEDLIIKVPTGTLIFDAETGELIADLVSHGQRVVVARGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST QAPY+A G G+E+ ++L+LKL+AD+G++GLPNAGKST L+ ++ A Sbjct: 122 GGRGNTHFATSTRQAPYFAEKGEKGEERWLYLELKLLADVGLVGLPNAGKSTLLSKISNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 P+IA YPFTT PNLG+V+ F +ADIPG+I+ AH+ G+GD FL+H ERT VL+ Sbjct: 182 NPEIAPYPFTTKTPNLGVVEREDITFTVADIPGLIEGAHENKGMGDEFLRHIERTLVLVF 241 Query: 243 IVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 ++ A L Q AY+ + EL Y+ +L +K I+ +++ID ++ + + Sbjct: 242 VIDAADLVTPPQKAYEILKKELYLYSPKLLEKPRIIAINKIDLPEAQERLPEIEKWLKNE 301 Query: 301 GQVPFEF-SSITGHGIPQILECLH 323 G VP+ F S+ G I ++LE + Sbjct: 302 G-VPYVFISAKEGINIDKLLELME 324 >gi|159026479|emb|CAO86451.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 342 Score = 278 bits (712), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 151/320 (47%), Positives = 219/320 (68%), Gaps = 1/320 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D A++ + G GG G ++FRREK++ GGP GG+GG+GG V AT NL TL+DF+ Sbjct: 1 MQFIDRAEIEVEGGKGGDGIVAFRREKYVPAGGPAGGNGGKGGSVIFVATQNLQTLLDFQ 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y ++FKA G++G N +GA G D ++ VP GT V++ D +I DL Q +I+A G Sbjct: 61 YSRYFKADDGKRGGPNNCTGANGSDRIIKVPCGTVVYDLDSEEIIGDLVTPEQTLIVAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP YA PG+ G+++ + L+LKL+A++GIIGLPNAGKST +++V+ Sbjct: 121 GKGGLGNRHFLSNNNRAPEYALPGLDGEKRHLRLELKLLAEVGIIGLPNAGKSTLISAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V++ + + ADIPG+I+ AH G G+G FL+H ERT + Sbjct: 181 SARPKIADYPFTTLIPNLGVVRKPTGDGTVFADIPGLIEGAHLGIGLGHEFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+VS E+ A YQ I EL+AY EL K+ +I+ ++ID VD +T+ + + A Sbjct: 241 LIHLVSLTAEDPIADYQIIQGELAAYGRELEKRSQILVFNKIDAVDEETIDNYQKQFAKI 300 Query: 300 CGQVPFEFSSITGHGIPQIL 319 S++TG G+ +L Sbjct: 301 TNAEILTISAVTGAGLTTLL 320 >gi|126659820|ref|ZP_01730946.1| GTP-binding protein [Cyanothece sp. CCY0110] gi|126618877|gb|EAZ89620.1| GTP-binding protein [Cyanothece sp. CCY0110] Length = 327 Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 147/323 (45%), Positives = 219/323 (67%), Gaps = 1/323 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D A++ + G GG G ++FRREK++ GGP GG+GG+GG V ++A NL TL+DFR Sbjct: 1 MQFIDRAEIEVEGGKGGDGIVAFRREKYVPAGGPAGGNGGKGGSVILKAEENLQTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + FKA G++G N +GA G+D+++ VP GT +++ + ++ DL + GQ + +A G Sbjct: 61 YARRFKADDGKRGGPNNCTGAMGKDIIIEVPCGTVIYDLETEEILGDLVENGQTLCVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP YA PG+ G+ + + L+LKL+A++GIIGLPNAGKST +AS++ Sbjct: 121 GKGGLGNKHFLSNQNRAPEYALPGLEGEHRNLRLELKLLAEVGIIGLPNAGKSTLIASLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V++ + + ADIPG+I AH+G G+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRKPTGDGTVFADIPGLIAGAHEGIGLGHEFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH+V + A Y+ I EL+AY L + +I+ L+++D D DTL EL Sbjct: 241 LLHLVDVTSADPIADYEVIQQELNAYGRGLSDRPQIIALNKVDACDQDTLDLISKELQQL 300 Query: 300 CGQVPFEFSSITGHGIPQILECL 322 F S++T G+ ++L+ + Sbjct: 301 SESPTFAISAVTKTGVEELLQVI 323 >gi|152985205|ref|YP_001350538.1| GTPase ObgE [Pseudomonas aeruginosa PA7] gi|261277681|sp|A6VBV3|OBG_PSEA7 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|150960363|gb|ABR82388.1| GTP-binding protein Obg/CgtA [Pseudomonas aeruginosa PA7] Length = 406 Score = 278 bits (711), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 149/288 (51%), Positives = 213/288 (73%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE +++++GDGG G +SFRREKFIE GGP+GG GG GG ++++A NLNTL+D+R Sbjct: 1 MKFVDEVSIHVKAGDGGNGLMSFRREKFIEKGGPNGGDGGDGGSIYLEADVNLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F AQ GE G ++ +GAKG+D+VL VPVGT V + + +I DL + GQR+++A G Sbjct: 61 YTRRFDAQRGENGGSKDCTGAKGDDLVLPVPVGTTVIDANTQEIIGDLTEPGQRLMVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G+ + + L+LK++AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGEARDLKLELKVLADVGLLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V G YK F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVGRYKSFVVADIPGLIEGAAEGAGLGIRFLKHLARTRI 240 Query: 240 LLHIV--SALEENVQA-AYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH+V + L+E+ A A + I+ EL ++ L ++ + L+++D + Sbjct: 241 LLHLVDMAPLDESDPADAAEVIVRELGRFSPALTERERWLVLNKMDQI 288 >gi|15599762|ref|NP_253256.1| GTPase ObgE [Pseudomonas aeruginosa PAO1] gi|116054395|ref|YP_793025.1| GTPase ObgE [Pseudomonas aeruginosa UCBPP-PA14] gi|218893661|ref|YP_002442530.1| GTPase ObgE [Pseudomonas aeruginosa LESB58] gi|254238686|ref|ZP_04932009.1| GTP-binding protein Obg [Pseudomonas aeruginosa C3719] gi|254244537|ref|ZP_04937859.1| GTP-binding protein Obg [Pseudomonas aeruginosa 2192] gi|313107211|ref|ZP_07793410.1| GTP-binding protein Obg [Pseudomonas aeruginosa 39016] gi|81622082|sp|Q9HVL8|OBG_PSEAE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|122257281|sp|Q02GB1|OBG_PSEAB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277682|sp|B7V0A9|OBG_PSEA8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|9950812|gb|AAG07954.1|AE004870_5 GTP-binding protein Obg [Pseudomonas aeruginosa PAO1] gi|115589616|gb|ABJ15631.1| GTP-binding protein Obg [Pseudomonas aeruginosa UCBPP-PA14] gi|126170617|gb|EAZ56128.1| GTP-binding protein Obg [Pseudomonas aeruginosa C3719] gi|126197915|gb|EAZ61978.1| GTP-binding protein Obg [Pseudomonas aeruginosa 2192] gi|218773889|emb|CAW29703.1| GTP-binding protein Obg [Pseudomonas aeruginosa LESB58] gi|310879912|gb|EFQ38506.1| GTP-binding protein Obg [Pseudomonas aeruginosa 39016] Length = 406 Score = 278 bits (711), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 148/288 (51%), Positives = 213/288 (73%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE +++++GDGG G +SFRREKFIE GGP+GG GG GG ++++A NLNTL+D+R Sbjct: 1 MKFVDEVSIHVKAGDGGNGLMSFRREKFIEKGGPNGGDGGDGGSIYLEADVNLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F AQ GE G ++ +GAKG+D++L VPVGT V + + +I DL + GQR+++A G Sbjct: 61 YTRRFDAQRGENGGSKDCTGAKGDDLILPVPVGTTVIDANTQEIIGDLTEPGQRLMVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G+ + + L+LK++AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGEARDLKLELKVLADVGLLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V G YK F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVGRYKSFVVADIPGLIEGAAEGAGLGIRFLKHLARTRI 240 Query: 240 LLHIV--SALEENVQA-AYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH+V + L+E+ A A + I+ EL ++ L ++ + L+++D + Sbjct: 241 LLHLVDMAPLDESDPADAAEVIVRELGRFSPALTERERWLVLNKMDQI 288 >gi|296391380|ref|ZP_06880855.1| GTPase ObgE [Pseudomonas aeruginosa PAb1] Length = 406 Score = 278 bits (711), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 148/288 (51%), Positives = 213/288 (73%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE +++++GDGG G +SFRREKFIE GGP+GG GG GG ++++A NLNTL+D+R Sbjct: 1 MKFVDEVSIHVKAGDGGNGLMSFRREKFIEKGGPNGGDGGDGGSIYLEADVNLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F AQ GE G ++ +GAKG+D++L VPVGT V + + +I DL + GQR+++A G Sbjct: 61 YTRRFDAQRGENGGSKDCTGAKGDDLILPVPVGTTVIDANTQEIIGDLTEPGQRLMVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G+ + + L+LK++AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGEARDLKLELKVLADVGLLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V G YK F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVGRYKSFVVADIPGLIEGAAEGAGLGIRFLKHLARTRI 240 Query: 240 LLHIV--SALEENVQA-AYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH+V + L+E+ A A + I+ EL ++ L ++ + L+++D + Sbjct: 241 LLHLVDMAPLDESDPADAAEVIVRELGRFSPALTERERWLVLNKMDQI 288 >gi|83746825|ref|ZP_00943873.1| GTP-binding protein CgtA (probably involved in DNA repair) [Ralstonia solanacearum UW551] gi|207721481|ref|YP_002251921.1| gtp-binding protein [Ralstonia solanacearum MolK2] gi|207744378|ref|YP_002260770.1| gtp-binding protein [Ralstonia solanacearum IPO1609] gi|83726594|gb|EAP73724.1| GTP-binding protein CgtA (probably involved in DNA repair) [Ralstonia solanacearum UW551] gi|206586641|emb|CAQ17227.1| gtp-binding protein [Ralstonia solanacearum MolK2] gi|206595783|emb|CAQ62710.1| gtp-binding protein [Ralstonia solanacearum IPO1609] Length = 366 Score = 278 bits (711), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 156/337 (46%), Positives = 232/337 (68%), Gaps = 7/337 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG VW A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGNGSASMRREKFVPFGGPDGGDGGRGGSVWAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + A++GE G + GA G+D+ L +PVGT +++ D LI DL +GQR+ LA G Sbjct: 61 FAKKHLARNGENGRGADCYGAAGDDITLRMPVGTAIYDADTDELIADLTLDGQRLCLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HFKSSTN+AP G G+ + + L+LK++AD+G++G+PNAGKST + +++ Sbjct: 121 GEGGWGNIHFKSSTNRAPRQKTDGKPGERRNLRLELKVLADVGLLGMPNAGKSTLITAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT V Sbjct: 181 NARPKIADYPFTTLHPNLGVVRTGPSKSFVVADIPGLIEGAAEGAGLGHQFLRHLQRTRV 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKN 294 LLH+V + +E++ A + I+ EL Y++EL K + L+++D V + + AR K+ Sbjct: 241 LLHVVDLAPFDESIDPVAEAKAIVGELKKYDAELYDKPRWLVLNKLDMVPEEEREARVKD 300 Query: 295 ELATQCGQVPF-EFSSITGHGIPQILECLHDKIFSIR 330 + + P S++T G P ++ + D + ++R Sbjct: 301 FIKRFKWKGPVHRISALTHDGCPGLVHAIQDYLDTLR 337 >gi|319952238|ref|YP_004163505.1| gtpase obg [Cellulophaga algicola DSM 14237] gi|319420898|gb|ADV48007.1| GTPase obg [Cellulophaga algicola DSM 14237] Length = 333 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 157/329 (47%), Positives = 221/329 (67%), Gaps = 6/329 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D KV + SG GG G + REKFI GGPDGG GGRGG V ++ + +L TL++F+++ Sbjct: 6 FVDYVKVNLESGKGGKGSVHLHREKFITKGGPDGGDGGRGGHVILRGSKDLWTLLNFKFK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F+A HGE G K +GA G DV L VP+GT + + D ++ ++ +EG+ IL PGG Sbjct: 66 RSFRAGHGEHGAKSRSTGADGVDVYLDVPLGTVIKDADTEEVLLEITEEGEEKILVPGGL 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF++STNQ P YA PGI GQE + L+LKL+AD+G++G PNAGKST L+ +T A Sbjct: 126 GGRGNWHFRTSTNQTPRYAQPGIPGQELSVILELKLLADVGLVGFPNAGKSTLLSVLTTA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLGIVK ++ F++ADIPGII+ A +G G+G FL+H ER LL Sbjct: 186 KPKIADYEFTTLKPNLGIVKYREFQSFVMADIPGIIEGAAEGKGLGYYFLRHIERNSTLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A ++V+ Y+ +LDEL YN E+ K +V +S+ D +D + + ++EL Q Sbjct: 246 FLIPADSKDVKNEYEILLDELRRYNPEMLDKERLVVISKSDMLDEELQSEMRSELEKQIK 305 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFSI 329 VPF F SS+ G+ + L DK++ + Sbjct: 306 DVPFMFISSVAQLGLVE----LKDKLWKM 330 >gi|172036876|ref|YP_001803377.1| GTPase ObgE [Cyanothece sp. ATCC 51142] gi|261266811|sp|B1X0M2|OBG_CYAA5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|171698330|gb|ACB51311.1| GTP-binding protein [Cyanothece sp. ATCC 51142] Length = 342 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 148/327 (45%), Positives = 220/327 (67%), Gaps = 1/327 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D A++ + G GG G ++FRREK++ GGP GG+GG+GG V ++A NL TL+DFR Sbjct: 1 MQFIDRAEIEVEGGKGGDGIVAFRREKYVPAGGPAGGNGGKGGSVVLKAEENLQTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + FKA G++G N +GA G+D ++ VP GT V++ + ++ DL + GQ + +A G Sbjct: 61 YARRFKADDGKRGGPNNCTGAMGKDTIVEVPCGTVVYDLETEEILGDLVKNGQTLCVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP YA PG+ G+ + + L+LKL+A++GIIGLPNAGKST +AS++ Sbjct: 121 GKGGLGNKHFLSNQNRAPEYALPGLEGEHRNLRLELKLLAEVGIIGLPNAGKSTLIASLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V++ + + ADIPG+I AH+G G+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRKPTGDGTVFADIPGLIAGAHEGIGLGHEFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH+V + A Y+ I EL+AY L + +I+ L+++D D DTL EL Sbjct: 241 LLHLVDVTSADPIADYEVIQQELTAYGRGLSDRPQIIALNKVDACDQDTLDLIAEELQQL 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKI 326 F S++T G+ ++L+ + ++ Sbjct: 301 SQSEIFTISAVTKTGVEELLQAIWHRL 327 >gi|163782572|ref|ZP_02177569.1| GTP-binding protein [Hydrogenivirga sp. 128-5-R1-1] gi|159882145|gb|EDP75652.1| GTP-binding protein [Hydrogenivirga sp. 128-5-R1-1] Length = 354 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 157/331 (47%), Positives = 228/331 (68%), Gaps = 4/331 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+Y++ G GG G ++F REK+ GGP GG GG+GGDV + ATS+ +TL+DF+Y+ Sbjct: 16 FIDRAKIYVKGGRGGDGIVAFLREKYRPKGGPAGGDGGKGGDVVLVATSSKHTLLDFKYK 75 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE G +N+ G G D+++ VPVGT V + + ++CDL +EGQR ++A GG Sbjct: 76 RHFKAERGEHGKGKNQKGRDGSDLLIYVPVGTIVRDAESNEILCDLTEEGQRCVVARGGR 135 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHF + TNQAP YA PG G+E+ + L+LKLIAD+GI+GLPNAGKST L+ +T+A Sbjct: 136 GGRGNAHFATPTNQAPRYAEPGEEGEERWVILELKLIADVGIVGLPNAGKSTLLSRLTKA 195 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PK+ DYPFTTL PNLG+++ + + +LADIPG+I+NAHQGAG+G FL+H ERT +LL Sbjct: 196 RPKVGDYPFTTLTPNLGVMELDETRRLVLADIPGLIENAHQGAGLGHEFLRHIERTKLLL 255 Query: 242 HIV---SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ + E A++ + EL Y+ EL +K +IV ++ID + +L ++ + Sbjct: 256 HLIDVSDSREVEPLEAFELVNRELELYSRELIRKPQIVVANKIDALSDRSLLKELRKEFE 315 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 G S+ TG GI ++ E L K + Sbjct: 316 ARGYTFHAVSAATGEGIEELKELLWKKYMEV 346 >gi|17547539|ref|NP_520941.1| GTPase ObgE [Ralstonia solanacearum GMI1000] gi|81592150|sp|Q8XVL0|OBG_RALSO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|17429843|emb|CAD16527.1| putative gtp-binding protein [Ralstonia solanacearum GMI1000] Length = 366 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 157/337 (46%), Positives = 229/337 (67%), Gaps = 7/337 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG VW A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGNGSASMRREKFVPFGGPDGGDGGRGGSVWAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + A++GE G + GA GED+ L +PVGT +++ D I DL +GQR+ LA G Sbjct: 61 FAKKHLARNGENGRGSDCYGAAGEDITLRLPVGTAIYDADTDEQIADLTLDGQRLCLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HFKSSTN+AP G G+ + + L+LK++AD+G++G+PNAGKST + +++ Sbjct: 121 GEGGWGNIHFKSSTNRAPRQKTDGKPGERRNLRLELKVLADVGLLGMPNAGKSTLITAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT V Sbjct: 181 NARPKIADYPFTTLHPNLGVVRTGPSKSFVVADIPGLIEGAAEGAGLGHQFLRHLQRTRV 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL-ARKKN 294 LLH+V + +E + A + I+ EL Y++EL K + L+++D V D AR K+ Sbjct: 241 LLHVVDLAPFDEGIDPVAEAKAIVGELKKYDAELYDKPRWLVLNKLDMVPEDEREARVKD 300 Query: 295 ELATQCGQVPF-EFSSITGHGIPQILECLHDKIFSIR 330 + + P S++T G P ++ + D + ++R Sbjct: 301 FIKRFKWKGPVHRISALTHDGCPGLIHAIQDYLDTLR 337 >gi|268317537|ref|YP_003291256.1| GTP-binding protein Obg/CgtA [Rhodothermus marinus DSM 4252] gi|262335071|gb|ACY48868.1| GTP-binding protein Obg/CgtA [Rhodothermus marinus DSM 4252] Length = 340 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 153/340 (45%), Positives = 222/340 (65%), Gaps = 9/340 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D + +RSG GGAG ++FRREK++ GGP GG GG GG V+++ NL TL+D R Sbjct: 1 MKFVDYVTITVRSGKGGAGAVAFRREKYVPKGGPAGGDGGDGGSVYLEGDPNLYTLLDLR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +H A+ G+ G +N+ G G DV++ VP+GT + +I ++ + GQR++LA G Sbjct: 61 YNRHHFAEDGQPGSGKNKKGRDGRDVIIRVPLGTVAKITETGEVIGEVLRPGQRLLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FKS TNQAP YA PG G+EK I L+LKL+AD+G++G PNAGKST +AS++ Sbjct: 121 GRGGRGNAFFKSPTNQAPRYAQPGEPGEEKNITLELKLLADVGLVGFPNAGKSTLIASIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL P LG+V G ++ F++AD+PGII+ AH+G G+G RFLKH ER + Sbjct: 181 AARPKIADYPFTTLEPALGMVYVGEFRSFVMADLPGIIEGAHEGRGLGIRFLKHIERNAI 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LL ++ +E Y+ +L EL A+N L +K V LS++D V D +++ +A Sbjct: 241 LLFVIPIVEAEPGRVYRTLLGELEAFNPALLEKPRAVALSKLDLVPED---EREDRVAAV 297 Query: 300 CGQVP-----FEFSSITGHGIPQILECLHDKIFSIRGENE 334 ++P + S++ G+ + E L ++ +R E Sbjct: 298 KAELPDDLPIYPISAVARIGLETLKEGLWRQLQELRAAAE 337 >gi|94497206|ref|ZP_01303778.1| Small GTP-binding protein domain [Sphingomonas sp. SKA58] gi|94423311|gb|EAT08340.1| Small GTP-binding protein domain [Sphingomonas sp. SKA58] Length = 363 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 162/338 (47%), Positives = 228/338 (67%), Gaps = 16/338 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M FLD+AK++I+SG GG G +SFRREK++E+GGPDGG+GG+GGD+ +A + LNTLIDFR Sbjct: 1 MHFLDQAKIFIKSGWGGPGAVSFRREKYVEYGGPDGGNGGKGGDIIFEAVAGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVF----------EEDGI-----SLI 105 Y QHFKAQ G+ GM +NR GA G+D+V+ VPVGTQ+ +EDG L+ Sbjct: 61 YTQHFKAQRGQPGMGKNRYGAGGDDLVVKVPVGTQILSDPTPIEGTEDEDGSMEYEQELL 120 Query: 106 CDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGII 165 D + GQRI+L GG+GG GN +K+STN+AP G GQE +WL+LKL+AD+G++ Sbjct: 121 ADFTEVGQRIVLLRGGDGGRGNLSYKTSTNRAPRQHGTGWPGQEMWVWLRLKLLADVGLV 180 Query: 166 GLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAG 225 G+PNAGKST + VT K K+ Y FTT P LG+V +EF+LADIPG+I+ A +GAG Sbjct: 181 GMPNAGKSTLINQVTNTKAKVGAYAFTTTKPQLGVVLHRDREFVLADIPGLIEGAAEGAG 240 Query: 226 IGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 IGDRFL H ER VLLH++ A ++ A++ + DEL+AY L +K ++V L++ D + Sbjct: 241 IGDRFLGHIERCRVLLHLIDATGDDPVEAFRIVTDELAAYGGGLDEKPQLVALNKGDLLG 300 Query: 286 SDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECL 322 + + ++L + G + F S TG G+ +L+ + Sbjct: 301 QELMEDIADQLREEAGVEDVFIISGATGEGVGALLDAV 338 >gi|327479523|gb|AEA82833.1| GTPase ObgE [Pseudomonas stutzeri DSM 4166] Length = 405 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 150/288 (52%), Positives = 211/288 (73%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE +++++GDGG G +SFRREKFIE GGP+GG GG GG V+++A NLNTL+D+R Sbjct: 1 MKFVDEVSIFVKAGDGGNGMMSFRREKFIEKGGPNGGDGGDGGSVYLEADENLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+AQ+G+KG + +GAKGED++L VPVGT V + ++ DL + GQR+++A G Sbjct: 61 YTRRFQAQNGQKGGSTDCTGAKGEDLILPVPVGTTVIDAATQEIMGDLTKAGQRLLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G + + L+LK++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGDARDLKLELKVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V G YK F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVGRYKSFVIADIPGLIEGASEGAGLGIRFLKHLARTRL 240 Query: 240 LLHIV--SALEENVQA-AYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH+V + L+ + A A + IL EL ++ L ++ + L++ D + Sbjct: 241 LLHLVDMAPLDGSDPADAAEVILHELEKFSPALTQRDRWLVLNKADQL 288 >gi|146281344|ref|YP_001171497.1| GTPase ObgE [Pseudomonas stutzeri A1501] gi|261277688|sp|A4VI54|OBG_PSEU5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|145569549|gb|ABP78655.1| GTP-binding protein Obg [Pseudomonas stutzeri A1501] Length = 405 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 150/288 (52%), Positives = 211/288 (73%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE +++++GDGG G +SFRREKFIE GGP+GG GG GG V+++A NLNTL+D+R Sbjct: 1 MKFVDEVSIFVKAGDGGNGMMSFRREKFIEKGGPNGGDGGDGGSVYLEADENLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+AQ+G+KG + +GAKGED++L VPVGT V + ++ DL + GQR+++A G Sbjct: 61 YTRRFQAQNGQKGGSTDCTGAKGEDLILPVPVGTTVIDAATQEIMGDLTKAGQRLLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G + + L+LK++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGDARDLKLELKVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V G YK F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVGRYKSFVIADIPGLIEGASEGAGLGIRFLKHLARTRL 240 Query: 240 LLHIV--SALEENVQA-AYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH+V + L+ + A A + IL EL ++ L ++ + L++ D + Sbjct: 241 LLHLVDMAPLDGSDPADAAEVILHELEKFSPALTQRDRWLVLNKADQL 288 >gi|15607036|ref|NP_214418.1| GTPase ObgE [Aquifex aeolicus VF5] gi|81816591|sp|O67849|OBG_AQUAE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|2984292|gb|AAC07816.1| GTP-binding protein [Aquifex aeolicus VF5] Length = 343 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 157/334 (47%), Positives = 227/334 (67%), Gaps = 6/334 (1%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 KF+D K++++ G GG G ++F REK+ GGP GG GG+GGDV + ATS+ +TL+DF+Y Sbjct: 3 KFVDRVKIFVKGGKGGDGAVAFLREKYRPKGGPAGGDGGKGGDVILVATSSKHTLLDFKY 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 ++H+ AQ+GE G + G GED+++ VPVGT V + +ICDL +EGQ+ I+A GG Sbjct: 63 KKHYIAQNGEPGKGKKMHGKDGEDLIIYVPVGTVVKDAQTGEVICDLVKEGQKCIVAKGG 122 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA F + TNQAP YA G G+E+ I L+LKLIAD+G++G PNAGKST L+ +TR Sbjct: 123 KGGRGNARFATPTNQAPTYAEKGQKGEERWIILELKLIADVGLVGFPNAGKSTLLSRLTR 182 Query: 182 AKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+++ + + ++ADIPG+I++AH+GAG+G FL+H ERT L Sbjct: 183 AKPKIADYPFTTLSPNLGVMELDWERRLVIADIPGLIEDAHKGAGLGHEFLRHIERTKFL 242 Query: 241 LHIVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 H++ + E VQ A++ I EL Y+ +L +K +IV ++ID + +L + + Sbjct: 243 AHVIDVSDFREREPVQ-AFEAINRELELYSPKLAQKPQIVVANKIDALSDRSLLSELEKY 301 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 + G + S++TG GI ++ E L K IR Sbjct: 302 FKEKGYEFYAVSALTGEGIEELKEGLWKKYEEIR 335 >gi|298244176|ref|ZP_06967982.1| GTP-binding protein Obg/CgtA [Ktedonobacter racemifer DSM 44963] gi|297551657|gb|EFH85522.1| GTP-binding protein Obg/CgtA [Ktedonobacter racemifer DSM 44963] Length = 435 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 158/341 (46%), Positives = 224/341 (65%), Gaps = 9/341 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D K+++++GDGG G + FRREKF GGPDGG GGRGG V+ +AT+ LNTLID+RY+ Sbjct: 2 FFDHTKIFVKAGDGGNGSMHFRREKFAPNGGPDGGDGGRGGSVYFEATNQLNTLIDYRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 Q+F A+ GE GM++ GAKG DV+L VP GT + + LI DL + GQ++++A GG Sbjct: 62 QNFSAESGESGMRQKMHGAKGNDVILKVPCGTIIRNAETAELIADLVEPGQQVMVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST+QAP A G G+E I L+L+LIAD+G++G PNAGKST L+ VT A Sbjct: 122 GGLGNVHFATSTHQAPREAQKGEPGEEHWITLELRLIADVGLVGYPNAGKSTLLSVVTAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK------EFILADIPGIIKNAHQGAGIGDRFLKHTER 236 +PKIADYPFTTL PNLG+V+ G+ +F+LADIPG+I+ A QG G+G FL+H +R Sbjct: 182 RPKIADYPFTTLVPNLGVVEVGHARQGDGFDFVLADIPGLIEGAAQGIGLGHEFLRHVKR 241 Query: 237 THVLLHIV--SALEE-NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 T +L+H++ S +EE + + I EL Y+ +L + +IV L++ID ++ Sbjct: 242 TRLLIHMLDGSLVEERDPWEDFAKINQELRDYDEQLAARPQIVVLNKIDLPEAQERWPAL 301 Query: 294 NELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 A G F S+ T G ++++ D++ I+ E E Sbjct: 302 KAQAEAAGYPVFAISAATHQGTQELMQFAGDRLREIKREEE 342 >gi|217967665|ref|YP_002353171.1| GTP-binding protein Obg/CgtA [Dictyoglomus turgidum DSM 6724] gi|261266766|sp|B8E0B2|OBG_DICTD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|217336764|gb|ACK42557.1| GTP-binding protein Obg/CgtA [Dictyoglomus turgidum DSM 6724] Length = 434 Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 151/324 (46%), Positives = 222/324 (68%), Gaps = 4/324 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+Y+++GDGG G I+FRREKF+ GGP GG GG+GGDV I+A NL+TL+DF Y+ Sbjct: 2 FIDRAKIYVKAGDGGNGCIAFRREKFVPKGGPAGGDGGKGGDVIIEADENLDTLLDFHYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+ A+ GE G +N+ G G+D+V+ VPVGT +F+ + L+ DL GQR+++A GG Sbjct: 62 RHYYAERGEHGKGKNQKGKDGKDLVIKVPVGTLIFDVETGELLADLVSHGQRVVVAKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHF +ST Q PY+A G G+E+ ++L+LKL+AD+G++GLPNAGKST L+ ++ A Sbjct: 122 GGRGNAHFATSTRQTPYFAEKGEKGEERWLYLELKLLADVGLLGLPNAGKSTLLSRISNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 P+IA YPFTT PNLG+V+ F +ADIPG+I+ AH+ G+GD FL+H ERT VL+ Sbjct: 182 TPEIAPYPFTTKTPNLGVVEREDITFTVADIPGLIEGAHENKGMGDEFLRHIERTSVLVF 241 Query: 243 IVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 ++ A + Q AY+ + EL Y+ +L +K I+ +++ID ++ + E Sbjct: 242 VLDAADMVNPPQRAYEILKKELYLYSPKLLEKPRIIAINKIDLPEAQERIPEIEEWLKNE 301 Query: 301 GQVPFEF-SSITGHGIPQILECLH 323 G VP+ F S+ G I ++LE + Sbjct: 302 G-VPYVFISAKEGINIDKLLELME 324 >gi|241664238|ref|YP_002982598.1| GTPase ObgE [Ralstonia pickettii 12D] gi|309783045|ref|ZP_07677764.1| Obg family GTPase CgtA [Ralstonia sp. 5_7_47FAA] gi|240866265|gb|ACS63926.1| GTP-binding protein Obg/CgtA [Ralstonia pickettii 12D] gi|308918153|gb|EFP63831.1| Obg family GTPase CgtA [Ralstonia sp. 5_7_47FAA] Length = 364 Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 157/337 (46%), Positives = 229/337 (67%), Gaps = 7/337 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG VW A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGNGSASMRREKFVPFGGPDGGDGGRGGSVWAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + A++GE G + GA GED+ L +PVGT +++ D LI DL +GQR+ LA G Sbjct: 61 FAKKHLARNGENGRGADCYGAAGEDITLRMPVGTAIYDADTEELIADLTVDGQRLCLAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HFKSSTN+AP G G+ + + L+LK++AD+G++G+PNAGKST + +++ Sbjct: 121 GEGGWGNIHFKSSTNRAPRQKTDGKAGERRNLRLELKVLADVGLLGMPNAGKSTLITAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT V Sbjct: 181 NARPKIADYPFTTLHPNLGVVRTGPSKSFVVADIPGLIEGAAEGAGLGHQFLRHLQRTRV 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL-ARKKN 294 LLH+V + +E+V A + I+ EL Y++EL K + L+++D V D AR K+ Sbjct: 241 LLHVVDLAPFDESVDPVAEAKAIVGELKKYDAELFDKPRWLVLNKLDMVPEDEREARVKD 300 Query: 295 ELATQCGQVPF-EFSSITGHGIPQILECLHDKIFSIR 330 + + P S++T G ++ + + + +R Sbjct: 301 FVKRFKWKGPVHRISALTHDGTQALVHAIQEYLDELR 337 >gi|325294469|ref|YP_004280983.1| GTPase obg [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064917|gb|ADY72924.1| GTPase obg [Desulfurobacterium thermolithotrophum DSM 11699] Length = 338 Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 148/334 (44%), Positives = 228/334 (68%), Gaps = 2/334 (0%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D AK++++ G GG G ++FRREKF+ GGP GG+GG+GGDV ++A N++TL+DF+Y Sbjct: 3 QFIDRAKIFVQGGHGGNGCVAFRREKFVPKGGPSGGNGGKGGDVILEADRNVHTLLDFKY 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 ++H+KA+ G G R+G GED+++ VPVGT V + + ++ DL++ GQR+I+A GG Sbjct: 63 KRHYKAERGRHGEGNKRTGRSGEDLIIKVPVGTVVKDAETGKVLGDLNKHGQRLIVAKGG 122 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA F + T + P +A PG G+E+ + L+LKL+AD+G+IG PNAGKSTFL+ VT Sbjct: 123 RGGRGNAEFATPTRRTPDFAEPGEPGEERWVELELKLLADVGLIGFPNAGKSTFLSRVTA 182 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKP+IADYPFTTL P LG+ K G F++ADIPG+I+ AH G G+G FL+H ERT +LL Sbjct: 183 AKPEIADYPFTTLRPILGVAKVGDFSFVVADIPGLIEGAHAGKGLGHEFLRHVERTKLLL 242 Query: 242 HIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 H++ + + + + A++ I EL Y+ EL +K +IV ++ID + + + + Sbjct: 243 HLIDLTDMTRDPKEAFEKINKELELYSLELTQKPQIVVGTKIDALTDRSKIEELKNYFEK 302 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 G F S++TG G+ +++ + K+ + E+ Sbjct: 303 KGYPFFAVSAVTGEGMNELMWFVSKKLKELEVED 336 >gi|166368502|ref|YP_001660775.1| GTPase ObgE [Microcystis aeruginosa NIES-843] gi|261266866|sp|B0JI21|OBG_MICAN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|166090875|dbj|BAG05583.1| GTP-binding protein [Microcystis aeruginosa NIES-843] Length = 342 Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 150/320 (46%), Positives = 218/320 (68%), Gaps = 1/320 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D A++ + G GG G ++FRREK++ GGP GG+GG+GG V AT NL TL+DF+ Sbjct: 1 MQFIDRAEIEVEGGKGGDGIVAFRREKYVPAGGPAGGNGGKGGSVIFVATQNLQTLLDFQ 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y ++FKA G++G N +GA G D ++ VP GT V++ D +I DL Q +I+A G Sbjct: 61 YSRYFKADDGKRGGPNNCTGANGSDRIIKVPCGTVVYDLDSEEIIGDLVTPEQTLIVAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP YA PG+ G+++ + L+LKL+A++GIIGLPNAGKST +++V+ Sbjct: 121 GKGGLGNRHFLSNNNRAPEYALPGLEGEKRHLRLELKLLAEVGIIGLPNAGKSTLISAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V++ + + ADIPG+I+ AH G G+G FL+H ERT + Sbjct: 181 SARPKIADYPFTTLIPNLGVVRKPTGDGTVFADIPGLIEGAHLGIGLGHEFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+VS E+ A YQ I EL+AY L K+ +I+ ++ID VD +T+ + + A Sbjct: 241 LIHLVSLTSEDPIADYQIIQGELAAYGRGLEKRSQILVFNKIDAVDEETIDNYQKQFAKI 300 Query: 300 CGQVPFEFSSITGHGIPQIL 319 S++TG G+ +L Sbjct: 301 TNAEILTISAVTGAGLTTLL 320 >gi|189501224|ref|YP_001960694.1| GTPase ObgE [Chlorobium phaeobacteroides BS1] gi|261266724|sp|B3EP74|OBG_CHLPB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|189496665|gb|ACE05213.1| GTP-binding protein Obg/CgtA [Chlorobium phaeobacteroides BS1] Length = 326 Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 156/329 (47%), Positives = 222/329 (67%), Gaps = 10/329 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D AK+Y++ G+GG G +SFRREK++ GGPDGG GGRGG V+++A ++TL+DFR Sbjct: 1 MKFVDSAKIYVKGGNGGNGCMSFRREKYVPKGGPDGGDGGRGGHVYLRADGQMSTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++H++AQ G G ++G G+D V+ VP GT V SLI DL +EG+ +++A G Sbjct: 61 YKKHYEAQRGVHGQGSKKNGKMGKDTVIPVPCGTVVRNAADGSLIADLTEEGEELLVAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF SST QAP YA PG +G I L+LKL+AD+G++G PNAGKST ++SV+ Sbjct: 121 GKGGKGNPHFASSTRQAPRYAEPGGVGMALEIELELKLMADVGLVGFPNAGKSTLISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLGIV+ Y F++ADIPGII+ A +G G+G +FLKH ERT V Sbjct: 181 AARPKIADYPFTTLVPNLGIVQYREYSSFVMADIPGIIEGAAEGKGLGLQFLKHIERTKV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L +++A E+++A Y + E+ + S L +K +V ++++D D ++ A Sbjct: 241 LAVLIAADSEDIEAEYASLKREMERFGSGLLEKPRVVLITKMDIAPEDFSVPSFSDDAPV 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFS 328 SS+TG GI + L D+++S Sbjct: 301 -----LMISSVTGEGI----DVLKDELWS 320 >gi|256819334|ref|YP_003140613.1| GTPase ObgE [Capnocytophaga ochracea DSM 7271] gi|256580917|gb|ACU92052.1| GTP-binding protein Obg/CgtA [Capnocytophaga ochracea DSM 7271] Length = 332 Score = 275 bits (704), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 155/326 (47%), Positives = 220/326 (67%), Gaps = 2/326 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D K+Y+ SG GGAG + REKF+ GGPDGG GGRGG + ++ +L TLI F++Q Sbjct: 6 FTDYVKIYVASGKGGAGSMHLHREKFVPKGGPDGGDGGRGGHIILRGNKHLWTLIHFKFQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 QHF+A+HGE G GA G+D+ L VP+GT V + + ++ ++ ++GQ II GG Sbjct: 66 QHFRAEHGEAGGANRSFGADGKDITLEVPLGTIVKDAETEEVLFEITEDGQEIIALRGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+++TNQ P YA PG+ G+E+ + L+LK++AD+G +G PNAGKST L+ +T A Sbjct: 126 GGLGNWHFRTATNQTPRYAQPGLPGEERELLLELKVLADVGFVGFPNAGKSTLLSVITSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI DYPFTTL PNLGIV+ Y+ F++ADIPGII+ A +G G+G FL+H ER VLL Sbjct: 186 KPKIGDYPFTTLKPNLGIVQNRDYQSFVVADIPGIIEGAAEGKGLGHYFLRHIERNSVLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A +++ A Y +L+EL YN EL K ++ +S+ D +D + + E+AT G Sbjct: 246 FLIPADSKDIIAEYHILLNELKEYNPELLDKDRLIAISKSDMLDDELTEAIRQEVATGLG 305 Query: 302 QVPFEF-SSITGHGIPQILECLHDKI 326 PF F SS++G GI Q+ + L + I Sbjct: 306 DTPFLFISSVSGKGIQQLKDKLWEMI 331 >gi|148262389|ref|YP_001229095.1| GTPase ObgE [Geobacter uraniireducens Rf4] gi|261266803|sp|A5GD29|OBG_GEOUR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|146395889|gb|ABQ24522.1| GTP1/OBG sub domain protein [Geobacter uraniireducens Rf4] Length = 338 Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 155/330 (46%), Positives = 225/330 (68%), Gaps = 16/330 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K++++SGDGGAG +SFRREKFI GGPDGG GG+GG+V ++A+ NL+TL+D R Sbjct: 1 MSFIDEVKIHVKSGDGGAGCVSFRREKFIPLGGPDGGDGGKGGNVIVEASPNLSTLLDLR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 H KA G GM ++R GA G D+ + +PVGT + + + ++ DL++ G ++L G Sbjct: 61 QHPHQKAGRGRNGMGKDRHGAYGADLKMLLPVGTVIKDAETDEVLVDLNEPGMSVVLLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F SSTN+AP +A PG G+E+ + L+LKL+AD+G++G+P+ GKS+ ++ ++ Sbjct: 121 GRGGQGNARFASSTNKAPKFAQPGEPGEERWLRLELKLMADVGLLGMPSVGKSSLISKIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADY FTTL PNLG+V + YK F++ADIPG+I+ AH+GAG+G RFLKH ERT Sbjct: 181 AARPKIADYHFTTLKPNLGVVAYKNYKSFVMADIPGLIEGAHEGAGLGHRFLKHLERTGQ 240 Query: 240 LLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+HI+ + + Y+ I EL+ +N EL +K +I+ +++ID L K L Sbjct: 241 LIHILDISWMPDRDPLREYEAINRELALFNPELAEKKQIIVINKID------LPVVKENL 294 Query: 297 AT------QCGQVPFEFSSITGHGIPQILE 320 AT + G F S+ TG GIP +L+ Sbjct: 295 ATVLPYFEERGLKVFPISAATGEGIPALLD 324 >gi|194290788|ref|YP_002006695.1| gtpase obge [Cupriavidus taiwanensis LMG 19424] gi|261266810|sp|B3R898|OBG_CUPTR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|193224623|emb|CAQ70634.1| GTPase involved in cell partioning and DNA repair [Cupriavidus taiwanensis LMG 19424] Length = 365 Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 158/337 (46%), Positives = 235/337 (69%), Gaps = 7/337 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ +G+GG G SFRREKF+ FGGPDGG GGRGG V+ A N+NTLIDFR Sbjct: 1 MKFIDEARIEAIAGNGGNGSASFRREKFVPFGGPDGGDGGRGGSVFAVADRNINTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + GA GED+ L +PVGT + + D +I DL + GQR+ LA G Sbjct: 61 YAKKHVARNGENGRGSDCYGAAGEDITLRMPVGTLITDMDTGEVIADLTEHGQRVCLAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++ ++ Sbjct: 121 GMGGWGNLHFKSSTNRAPRQQVDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISHIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL+PNLG+V+ +++ F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKVADYPFTTLHPNLGVVRVDHEQSFVVADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK-KN 294 LLHIV + +E V A + I++EL Y+ L +K + L+++D V D A K K+ Sbjct: 241 LLHIVDLAPFDEAVDPVAEARAIVNELKKYDETLYEKPRWLVLNKLDMVPEDERAAKVKD 300 Query: 295 ELATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 L + P F+ S++TG G +++ + D + +I+ Sbjct: 301 FLKRYKWKGPVFQISALTGEGCRELIYAIKDHLQAIK 337 >gi|282898656|ref|ZP_06306644.1| Small GTP-binding protein domain protein [Cylindrospermopsis raciborskii CS-505] gi|281196524|gb|EFA71433.1| Small GTP-binding protein domain protein [Cylindrospermopsis raciborskii CS-505] Length = 352 Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 150/325 (46%), Positives = 225/325 (69%), Gaps = 7/325 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A + + +G GG G ++FRREK++ GGP GG+GG+GG V A NL TL+DFR Sbjct: 14 MQFIDQAIIEVEAGKGGDGIVAFRREKYVPAGGPSGGNGGKGGSVIFVADPNLQTLLDFR 73 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+ FKA++G++G N +GA G+D+++ VP GT +++ L+CDL + QR A G Sbjct: 74 YKHLFKAENGDRGGPNNCTGAGGKDLIVEVPCGTAIYDGTTDGLLCDLVEPQQRFRAAEG 133 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP Y+ PG+ G++K++ L+LKL+A++GIIGLPNAGKST ++S++ Sbjct: 134 GKGGLGNQHFLSNRNRAPEYSLPGLEGEKKVLRLELKLLAEVGIIGLPNAGKSTLISSLS 193 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+VK+ + + ADIPG+I+ A GAG+G FL+H ERT + Sbjct: 194 AARPKIADYPFTTLIPNLGVVKKPTGDGTVFADIPGLIEGASNGAGLGHDFLRHIERTRI 253 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ + E+V A Y I EL AY+ L K+ +I+ L+++D VD + + N LAT+ Sbjct: 254 LLHLIDSTSEDVIADYHTIQAELKAYDRGLAKRPQILALNKVDAVDQEVV--DLNGLATR 311 Query: 300 CGQVP----FEFSSITGHGIPQILE 320 + F S++T G+ +++ Sbjct: 312 LNHLSLAPVFIISAVTRTGLDAMMQ 336 >gi|153007163|ref|YP_001381488.1| GTPase ObgE [Anaeromyxobacter sp. Fw109-5] gi|261266655|sp|A7HIF8|OBG_ANADF RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|152030736|gb|ABS28504.1| GTP-binding protein Obg/CgtA [Anaeromyxobacter sp. Fw109-5] Length = 353 Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 147/335 (43%), Positives = 224/335 (66%), Gaps = 8/335 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE ++++++GDGG G +++RREKFI GGP GG GG G DV + L+TL+D+R Sbjct: 1 MKFVDEVRIHVKAGDGGNGAVAWRREKFIPRGGPAGGDGGNGADVVLVVDPQLSTLLDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A+ GE G + +G GE +VL VP GT V + LI DL +R+++A G Sbjct: 61 YVREHRAKSGEHGQGSDMNGRDGEPLVLRVPPGTVVKDAATGELIADLGAADERLVVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN +F +STNQAP YA G LG+E+ + L+LKL+AD+GI+G PNAGKST ++ ++ Sbjct: 121 GRGGLGNMNFATSTNQAPRYAEDGTLGEERDLVLELKLLADVGIVGYPNAGKSTLISRIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIADYPFTTL PNLG+V + F++ADIPG+I+ AH+GAG+G +FL+H ER VL Sbjct: 181 RARPKIADYPFTTLVPNLGVVSWRERSFVVADIPGLIEGAHEGAGLGHQFLRHVERCRVL 240 Query: 241 LHIVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 +H+V + +A Y+ I EL+ Y+ L +K +I+ +++ID ++ K + Sbjct: 241 VHLVEGANPEEGRSPKADYEAINRELALYSPTLAEKPQILAVTKIDVPEARAAGEKLRKA 300 Query: 297 ATQCGQVPFE---FSSITGHGIPQILECLHDKIFS 328 + Q P E S++TG G+P++++ + +++ Sbjct: 301 FARRKQ-PVEVHLVSAVTGEGMPELMDAVGRALYA 334 >gi|299065632|emb|CBJ36804.1| GTPase involved in cell partioning and DNA repair [Ralstonia solanacearum CMR15] Length = 366 Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 156/333 (46%), Positives = 226/333 (67%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG VW A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGNGSASMRREKFVPFGGPDGGDGGRGGSVWAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + A++GE G + GA GED+ L +PVGT +++ D I DL +GQR+ LA G Sbjct: 61 FAKKHLARNGENGRGADCYGAAGEDITLRLPVGTAIYDSDTDEQIADLTLDGQRLCLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HFKSSTN+AP G G+ + + L+LK++AD+G++G+PNAGKST + +++ Sbjct: 121 GEGGWGNIHFKSSTNRAPRQKTDGKPGERRNLRLELKVLADVGLLGMPNAGKSTLITAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT V Sbjct: 181 NARPKIADYPFTTLHPNLGVVRTGPSKSFVVADIPGLIEGAAEGAGLGHQFLRHLQRTRV 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL-ARKKN 294 LLH+V + +E + A + I+ EL Y++EL K + L+++D V D AR K+ Sbjct: 241 LLHVVDLAPFDEGIDPVAEAKAIVGELKKYDAELYDKPRWLVLNKLDMVPEDEREARVKD 300 Query: 295 ELATQCGQVPF-EFSSITGHGIPQILECLHDKI 326 + + P S++T G P ++ + D + Sbjct: 301 FIKRFKWKGPVHRISALTHDGCPGLIHAIQDYL 333 >gi|300690365|ref|YP_003751360.1| GTPase involved in cell partioning and DNA repair [Ralstonia solanacearum PSI07] gi|299077425|emb|CBJ50051.1| GTPase involved in cell partioning and DNA repair [Ralstonia solanacearum PSI07] Length = 366 Score = 275 bits (703), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 155/337 (45%), Positives = 231/337 (68%), Gaps = 7/337 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG VW A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGNGSASMRREKFVPFGGPDGGDGGRGGSVWAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + A++GE G + GA GED+ L +PVGT +++ D I DL +G+R+ LA G Sbjct: 61 FAKKHLARNGENGRGADCYGAAGEDITLRMPVGTVIYDADTDEQIADLTVDGERLCLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HFKSSTN+AP G G+ + + L+LK++AD+G++G+PNAGKST + +++ Sbjct: 121 GEGGWGNIHFKSSTNRAPRQKTDGKPGERRNLRLELKVLADVGLLGMPNAGKSTLITAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT V Sbjct: 181 NARPKIADYPFTTLHPNLGVVRTGPSKSFVVADIPGLIEGAAEGAGLGHQFLRHLQRTRV 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKN 294 LLH+V + +E++ A + I+ EL Y++EL K + L+++D V + + AR K+ Sbjct: 241 LLHVVDLAPFDESIDPVAEAKAIVGELKKYDAELYDKPRWLVLNKLDMVPEEEREARVKD 300 Query: 295 ELATQCGQVPF-EFSSITGHGIPQILECLHDKIFSIR 330 + + P S++T G P ++ + D + ++R Sbjct: 301 FIKRFKWKGPVHRISALTHDGCPGLVHAIQDYLDTLR 337 >gi|226946114|ref|YP_002801187.1| GTPase ObgE [Azotobacter vinelandii DJ] gi|261266666|sp|C1DEA4|OBG_AZOVD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|226721041|gb|ACO80212.1| GTPase [Azotobacter vinelandii DJ] Length = 405 Score = 275 bits (703), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 148/288 (51%), Positives = 207/288 (71%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE +++++GDGG G +SFRREKFIE GGP+GG GG GG V+++A NLNTL+D+R Sbjct: 1 MKFVDEVSIFVKAGDGGNGMMSFRREKFIEKGGPNGGDGGDGGSVYLEADENLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+AQ GEKG + +GAKG+D++L VPVGT V + +I DL + GQR+++A G Sbjct: 61 YTRRFEAQRGEKGGSNDCTGAKGDDLILPVPVGTTVIDSGTQEIIGDLVRPGQRLLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G+ + + L+LK++AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGEARDLKLELKVLADVGLLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V G YK F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVGRYKSFVVADIPGLIEGAAEGAGLGIRFLKHLARTRL 240 Query: 240 LLHIVSALEE---NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH+V + A + IL EL ++ L ++ + L++ D + Sbjct: 241 LLHLVDMAPLDGGDPAGAAETILRELEKFSPALTERERWLVLNKADQL 288 >gi|257453448|ref|ZP_05618743.1| Obg family GTPase CgtA [Enhydrobacter aerosaccus SK60] gi|257449200|gb|EEV24148.1| Obg family GTPase CgtA [Enhydrobacter aerosaccus SK60] Length = 406 Score = 275 bits (702), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 151/325 (46%), Positives = 223/325 (68%), Gaps = 6/325 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA V +++GDGG G +SFRREK++ GGPDGG GG+GGDV++ N NTL+D+R Sbjct: 1 MRFIDEAIVTVKAGDGGNGIVSFRREKYVPKGGPDGGDGGKGGDVYVVCDDNTNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + + A+ GE G +N SG +D+ L+VP+GT V + + ++ DL ++GQ +A G Sbjct: 61 FTRRYDAKRGENGGAKNCSGRGADDIYLSVPIGTTVVDTETGEVLADLTKKGQTARIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFK+STNQAP A PG G+ K++ +LK++AD+G+IGLPNAGKSTF+ V+ Sbjct: 121 GDGGQGNTHFKTSTNQAPRRATPGFPGELKVLKFELKVVADVGLIGLPNAGKSTFIRQVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+A+YPFTTL PNLG+V G ++ F++ADIPG+I+ A +GAG+G RFLKH RT Sbjct: 181 AAKPKVANYPFTTLVPNLGVVDVGKHRSFVMADIPGLIEGASEGAGLGIRFLKHVARTRR 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V + A Q I +EL ++ EL K +I+ L++ID V ++ L + + Sbjct: 241 LLHLVDVQPIDGSDPVANAQVIFNELEKFSPELSKLPQILILNKIDQVPAEELNQLCTHI 300 Query: 297 ATQCGQ--VPFEFSSITGHGIPQIL 319 + G + F S++TG G+ ++ Sbjct: 301 VAELGWTGMVFRTSTLTGEGVDAVV 325 >gi|16329540|ref|NP_440268.1| GTPase ObgE [Synechocystis sp. PCC 6803] gi|81817760|sp|P72931|OBG_SYNY3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|1652022|dbj|BAA16948.1| GTP-binding protein [Synechocystis sp. PCC 6803] Length = 368 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 149/323 (46%), Positives = 221/323 (68%), Gaps = 1/323 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ ++ G GG G +SFRREK++ GGP GG+GGRGG V +A +NL TL+DFR Sbjct: 1 MQFIDQAEIEVQGGKGGDGMVSFRREKYVPAGGPSGGNGGRGGSVIFEADANLQTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + FKA+ G+KG N +GA G+DVV+ VP GT V++ DG L+ DL GQR+ +A G Sbjct: 61 YARIFKAEDGKKGGSSNCTGANGKDVVVQVPCGTMVYDLDGECLLGDLVSPGQRLCVAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP YA PG+ G+++ + L+LKL+A++GIIGLPNAGKST +A+++ Sbjct: 121 GKGGLGNQHFLSNRNRAPEYALPGLEGEQRQLRLELKLLAEVGIIGLPNAGKSTLIAALS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V++ + + ADIPG+I+ A G G+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRKPTGDGTVFADIPGLIEGAAAGIGLGHEFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ + A ++ I EL AY + +K +I+ L++ID +D + + + EL Sbjct: 241 LLHVLDVTAGDPIANFRVIQQELDAYGRGITEKPQIIALNKIDALDGEMIGEIETELKRF 300 Query: 300 CGQVPFEFSSITGHGIPQILECL 322 S+ T G+ +++ + Sbjct: 301 STAPCLHISAATRRGLDDLMQLV 323 >gi|126438462|ref|YP_001060498.1| GTPase ObgE [Burkholderia pseudomallei 668] gi|261266704|sp|A3NDS7|OBG_BURP6 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|126217955|gb|ABN81461.1| Obg family GTPase CgtA [Burkholderia pseudomallei 668] Length = 372 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 155/333 (46%), Positives = 226/333 (67%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V++ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVYVIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+D+ L +PVGT + + D LI DL + Q++++A G Sbjct: 61 YAKKHMARNGENGRGSDCYGKGGDDITLRMPVGTVINDMDTGELIADLTEHDQKVLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPGKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E V A + I+ EL Y+ L +K + L+++D V D + + Sbjct: 241 LLHLVDLAPFDERVDPVAEARAIVGELRKYDESLYEKPRWLVLNKLDMVPEDERRARVAD 300 Query: 296 LATQCGQV--PFEFSSITGHGIPQILECLHDKI 326 + G FE S++TG G ++ +HD + Sbjct: 301 FIERFGWTGPVFEISALTGQGCESLVYAIHDYL 333 >gi|187930133|ref|YP_001900620.1| GTPase ObgE [Ralstonia pickettii 12J] gi|261277692|sp|B2UCV3|OBG_RALPJ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|187727023|gb|ACD28188.1| GTP-binding protein Obg/CgtA [Ralstonia pickettii 12J] Length = 364 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 156/337 (46%), Positives = 229/337 (67%), Gaps = 7/337 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG VW A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGNGSASMRREKFVPFGGPDGGDGGRGGSVWAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + A++GE G + GA G+D+ L +PVGT +++ D LI DL +GQR+ LA G Sbjct: 61 FAKKHLARNGENGRGADCYGAAGDDITLRMPVGTAIYDADTEELIADLTIDGQRLCLAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HFKSSTN+AP G G+ + + L+LK++AD+G++G+PNAGKST + +++ Sbjct: 121 GEGGWGNIHFKSSTNRAPRQKTDGKAGERRNLRLELKVLADVGLLGMPNAGKSTLITAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT V Sbjct: 181 NARPKIADYPFTTLHPNLGVVRTGPSKSFVVADIPGLIEGAAEGAGLGHQFLRHLQRTRV 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL-ARKKN 294 LLH+V + +E+V A + I+ EL Y++EL K + L+++D V D AR K+ Sbjct: 241 LLHVVDLAPFDESVDPVAEAKAIVGELKKYDAELFDKPRWLVLNKLDMVPEDEREARVKD 300 Query: 295 ELATQCGQVPF-EFSSITGHGIPQILECLHDKIFSIR 330 + + P S++T G ++ + + + +R Sbjct: 301 FVKRFKWKGPVHRISALTHDGTQALVHAIQEYLDELR 337 >gi|118581359|ref|YP_902609.1| GTPase ObgE [Pelobacter propionicus DSM 2379] gi|261277660|sp|A1AT81|OBG_PELPD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|118504069|gb|ABL00552.1| GTP1/OBG sub domain protein [Pelobacter propionicus DSM 2379] Length = 338 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 151/339 (44%), Positives = 228/339 (67%), Gaps = 5/339 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE ++ SG GGAG ++FRREKFIEFGGP+GG GG+GGDV A + L++L++ R Sbjct: 1 MKFIDEVTLFASSGHGGAGCVAFRREKFIEFGGPNGGDGGKGGDVVFVAKAGLSSLLELR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ H KA+ G G +NR GA G D+V+ VPVGT + + + + DL + GQR++L G Sbjct: 61 HRPHQKAEKGHNGQGKNRHGASGADLVIKVPVGTVISDAESGEQLADLAENGQRVVLLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F S+T++ P +A PG GQE + L+LKL+AD+G++GLPNAGKS+ + ++ Sbjct: 121 GRGGQGNARFASATHKTPRFAQPGEEGQEAKLRLELKLMADVGLLGLPNAGKSSLITKIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTT+ P+LG+V + + F++ADIPGII+ AH+GAG+G RFLKH ER+ + Sbjct: 181 AARPKIADYPFTTIKPSLGVVPYKNARSFVMADIPGIIEGAHEGAGLGHRFLKHLERSGI 240 Query: 240 LLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V E + A Y+ + EL+ ++ EL K ++V ++++D + + Sbjct: 241 LLHLVDISWMPERDPLAEYEAVTRELTMFSPELAAKEQVVVITKLDLPQTREKLAEIRSW 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 + G F SS TG G+ ++L+ + +++ R E E+ Sbjct: 301 FEERGIRVFPISSATGEGVGELLDEIARRLWG-RIEEEW 338 >gi|77166481|ref|YP_345006.1| GTPase ObgE [Nitrosococcus oceani ATCC 19707] gi|254435390|ref|ZP_05048897.1| GTP-binding protein Obg/CgtA [Nitrosococcus oceani AFC27] gi|123593220|sp|Q3J6S0|OBG_NITOC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|76884795|gb|ABA59476.1| GTP-binding protein, GTP1/OBG family [Nitrosococcus oceani ATCC 19707] gi|207088501|gb|EDZ65773.1| GTP-binding protein Obg/CgtA [Nitrosococcus oceani AFC27] Length = 345 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 152/329 (46%), Positives = 224/329 (68%), Gaps = 7/329 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +++G GG G +SFRREKFI FGGPDGG GG GG +++ A N+NTL+DFR Sbjct: 1 MKFIDEAIIKVQAGAGGHGCLSFRREKFIPFGGPDGGDGGNGGSIYLIADKNINTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q HF+A+ GE G R ++G ED+ + VP+GT+ +E + L+ DL + GQ +++A G Sbjct: 61 HQHHFRARRGENGRGRLQTGKSSEDIYIPVPLGTEAWEAETGELLGDLTRPGQTLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSSTN+AP G G+E+ + L+LKL+AD+G++GLPNAGKSTF+ V+ Sbjct: 121 GAHGLGNARFKSSTNRAPRKTTQGKPGEERTLRLELKLLADVGLLGLPNAGKSTFIRQVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTL+P+LG+V+ + + F+ ADIPG+I+ A QGAG+G RFLKH RT + Sbjct: 181 AATPKVADYPFTTLHPHLGVVRIDSNRSFVAADIPGLIEGAAQGAGLGVRFLKHLSRTRL 240 Query: 240 LLHI--VSALEENVQA--AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH V+ LE + + + I EL ++ EL + + + ++ D + S A + E Sbjct: 241 LLHFVDVAPLEPTLSPVDSVRAIHRELQQFSPELAAQEQWLVFNKTDLISSSERASRCQE 300 Query: 296 LATQ-CGQVP-FEFSSITGHGIPQILECL 322 + + C Q P +E S++TG G +++ + Sbjct: 301 IIREICWQKPVYEISALTGEGCQRLIHAV 329 >gi|167740281|ref|ZP_02413055.1| GTPase ObgE [Burkholderia pseudomallei 14] gi|237813894|ref|YP_002898345.1| Obg family GTPase CgtA [Burkholderia pseudomallei MSHR346] gi|254180572|ref|ZP_04887170.1| GTP-binding protein, GTP1/OBG family [Burkholderia pseudomallei 1655] gi|184211111|gb|EDU08154.1| GTP-binding protein, GTP1/OBG family [Burkholderia pseudomallei 1655] gi|237503912|gb|ACQ96230.1| Obg family GTPase CgtA [Burkholderia pseudomallei MSHR346] Length = 372 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 155/333 (46%), Positives = 227/333 (68%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V++ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVYVIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+D+ L +PVGT + + D LI DL + Q++++A G Sbjct: 61 YAKKHMARNGENGRGSDCYGKGGDDITLRMPVGTVINDMDTGELIADLTEHDQKVLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPGKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E+V A + I+ EL Y+ L +K + L+++D V D + + Sbjct: 241 LLHLVDLAPFDESVDPVAEARAIVGELRKYDESLYEKPRWLVLNKLDMVPEDERRARVAD 300 Query: 296 LATQCGQV--PFEFSSITGHGIPQILECLHDKI 326 + G FE S++TG G ++ +HD + Sbjct: 301 FIERFGWTGPVFEISALTGQGCEGLVYAIHDYL 333 >gi|225848239|ref|YP_002728402.1| GTPase ObgE [Sulfurihydrogenibium azorense Az-Fu1] gi|225644671|gb|ACN99721.1| Obg family GTPase CgtA [Sulfurihydrogenibium azorense Az-Fu1] Length = 348 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 153/327 (46%), Positives = 221/327 (67%), Gaps = 4/327 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK+++++GDGG G ++F REKF+ GGP GG GG+GGDV + A S+L TL+DF+Y+ Sbjct: 2 FIDKAKIFVKAGDGGNGCVAFHREKFVPMGGPSGGDGGKGGDVILVADSHLQTLMDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KA+ G+ G N+ G GED+++ VPVGT V + ++ DL +EGQ +I+A GG Sbjct: 62 RHYKAEKGQHGQGGNKKGKDGEDLIIKVPVGTVVKDAQTGEILADLVEEGQSVIVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA FKS TNQAP A PG G+EK I L+LKL+AD+GIIG PNAGKST ++ +++A Sbjct: 122 GGKGNAAFKSPTNQAPLTAEPGEKGEEKWIELELKLLADVGIIGFPNAGKSTLISVLSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEF-ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADYPFTTL P LG+++ +F +LADIPG+I+ A +G G+G FL+H ERT L+ Sbjct: 182 KPKIADYPFTTLTPVLGVLQLDVDDFLVLADIPGLIEGASEGHGLGHEFLRHIERTKFLI 241 Query: 242 HIVSA---LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ E + A+ I EL Y+ +L KK +IV ++ID + +L K + Sbjct: 242 HLIDVSDFRERDPIDAFNIINKELENYSPDLLKKPQIVVANKIDALSDKSLIDKLEKYFA 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDK 325 + G S IT G+ +++ L +K Sbjct: 302 EKGYPFVAVSLITKEGVDKLINILREK 328 >gi|330878955|gb|EGH13104.1| GTPase CgtA [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330966390|gb|EGH66650.1| GTPase CgtA [Pseudomonas syringae pv. actinidiae str. M302091] Length = 407 Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 153/325 (47%), Positives = 220/325 (67%), Gaps = 8/325 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +++GDGG G +SFRREKFIE GGP+GG GG GG V++ A NLNTL+D+R Sbjct: 1 MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSVFMIADVNLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HF A+ G G + +G KGE++VL VPVGT + + +I DL ++GQR+++A G Sbjct: 61 YTRHFDAERGANGGSADCTGRKGEELVLRVPVGTTIIDATTQEIIGDLTKDGQRLMVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP +PG LG ++ + L+LK++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTSPGKLGDQRDLKLELKVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVDRWKSFVVADIPGLIEGASDGAGLGIRFLKHLARTRL 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V E + A + I+ EL ++ L ++ + L++ D + + +K E+ Sbjct: 241 LLHLVDMAPLDETSAPDAAEVIVSELEKFSPSLAERDRWLVLNKCDQILEEEQEARKQEI 300 Query: 297 ATQ---CGQVPFEFSSITGHGIPQI 318 + G V + S+I G Q+ Sbjct: 301 VDRLEWTGPV-YVISAIAKEGTEQL 324 >gi|94312035|ref|YP_585245.1| GTPase ObgE [Cupriavidus metallidurans CH34] gi|261277691|sp|Q1LIQ0|OBG_RALME RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|93355887|gb|ABF09976.1| GTPase involved in cell partioning and DNA repair [Cupriavidus metallidurans CH34] Length = 365 Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 158/331 (47%), Positives = 231/331 (69%), Gaps = 7/331 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ +G+GG G SFRREKF+ FGGPDGG GGRGG V+ QA N+NTLIDFR Sbjct: 1 MKFIDEARIEAIAGNGGNGSASFRREKFVPFGGPDGGDGGRGGSVFAQADRNINTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + GA GEDV L +PVGT + + D +I DL + GQ + LA G Sbjct: 61 YAKKHVARNGENGRGSDCYGAAGEDVTLRMPVGTLISDMDTGEVIADLTEHGQLVCLAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++ V+ Sbjct: 121 GMGGWGNLHFKSSTNRAPRQQVDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISHVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL+PNLG+V+ +++ F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKVADYPFTTLHPNLGVVRVDHEQSFVVADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKN 294 LLHIV + +ENV A + I++EL Y+ L K + L+++D V + + AR K+ Sbjct: 241 LLHIVDIAPFDENVDPVAEAKAIVNELKKYDETLYDKPRWLVLNKLDVVPEEERAARVKD 300 Query: 295 ELATQCGQVP-FEFSSITGHGIPQILECLHD 324 + + P F S++TG G +++ + D Sbjct: 301 FVKRYKWKGPVFHISALTGEGCRELVYAIKD 331 >gi|167564174|ref|ZP_02357090.1| GTPase ObgE [Burkholderia oklahomensis EO147] gi|167571295|ref|ZP_02364169.1| GTPase ObgE [Burkholderia oklahomensis C6786] Length = 372 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 155/333 (46%), Positives = 227/333 (68%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V++ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVYVIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+D+ L +PVGT + + D LI DL + Q++++A G Sbjct: 61 YAKKHLARNGENGRGSDCYGKGGDDITLRMPVGTIINDMDTGELIADLTEHDQKVLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPGKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +ENV A + I+ EL Y+ L +K + L+++D V D + + Sbjct: 241 LLHLVDLAPFDENVDPVAEAKAIVGELRKYDESLHEKPRWLVLNKLDMVPEDERGARVAD 300 Query: 296 LATQCGQV--PFEFSSITGHGIPQILECLHDKI 326 + G FE S++TG G ++ ++D + Sbjct: 301 FIERFGWTGPVFEISALTGQGCEGLVYAIYDYL 333 >gi|113869204|ref|YP_727693.1| GTPase ObgE [Ralstonia eutropha H16] gi|123328883|sp|Q0K6P6|OBG_RALEH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|113527980|emb|CAJ94325.1| Predicted GTPase [Ralstonia eutropha H16] Length = 365 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 157/337 (46%), Positives = 234/337 (69%), Gaps = 7/337 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ +G+GG G SFRREKF+ FGGPDGG GGRGG V+ A N+NTLIDFR Sbjct: 1 MKFIDEARIEAIAGNGGNGSASFRREKFVPFGGPDGGDGGRGGSVFAVADRNINTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + GA GED+ L +PVGT + + D +I DL + GQR+ LA G Sbjct: 61 YARKHVARNGENGRGSDCYGAAGEDITLRMPVGTLITDMDTGEVIADLTEHGQRVCLAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++ ++ Sbjct: 121 GMGGWGNLHFKSSTNRAPRQQVDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISHIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL+PNLG+V+ +++ F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKVADYPFTTLHPNLGVVRVDHEQSFVVADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKKN 294 LLHIV + +E V A + I++EL Y+ L K + L+++D V D AR K+ Sbjct: 241 LLHIVDLAPFDEAVDPVAEAKAIVNELKKYDETLYDKPRWLVLNKLDVVPEDERAARVKD 300 Query: 295 ELATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 + + P F+ S++TG G +++ + D + +I+ Sbjct: 301 FIKRYKWKGPVFQISALTGEGCRELIYAIKDHLQAIK 337 >gi|282896899|ref|ZP_06304905.1| Small GTP-binding protein domain protein [Raphidiopsis brookii D9] gi|281198308|gb|EFA73198.1| Small GTP-binding protein domain protein [Raphidiopsis brookii D9] Length = 340 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 151/325 (46%), Positives = 222/325 (68%), Gaps = 7/325 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A + + +G GG G ++FRREK++ GGP GG+GG+GG V A NL TL+DF+ Sbjct: 1 MQFIDQAIIEVEAGKGGDGIVAFRREKYVPAGGPSGGNGGKGGSVIFVADPNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+ FKA++G +G N +GA GED+++ VP GT +++ L+CDL + QR A G Sbjct: 61 YKHLFKAENGSRGGPSNCTGAGGEDLIVEVPCGTTIYDGTTDGLLCDLVEPQQRFRAAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP Y+ PG+ G++K++ L+LKL+A++GIIGLPNAGKST ++S++ Sbjct: 121 GKGGLGNQHFLSNRNRAPEYSLPGLEGEKKVLRLELKLLAEVGIIGLPNAGKSTLISSLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+VK+ + + ADIPG+I+ A GAG+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLIPNLGVVKKPTGDGTVFADIPGLIEGASNGAGLGHDFLRHIERTRI 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ + E+V Y I EL AY L K+ +I+ L++ID VD +T N LAT+ Sbjct: 241 LLHLIDSTSEDVITDYHTIQSELKAYGRGLAKRPQILALNKIDAVDQET--ADLNGLATR 298 Query: 300 CGQVP----FEFSSITGHGIPQILE 320 + F S++T G+ +++ Sbjct: 299 LNHLSLAPVFIISAVTRTGLDAMMQ 323 >gi|171059949|ref|YP_001792298.1| GTP-binding protein Obg/CgtA [Leptothrix cholodnii SP-6] gi|261266851|sp|B1Y280|OBG_LEPCP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|170777394|gb|ACB35533.1| GTP-binding protein Obg/CgtA [Leptothrix cholodnii SP-6] Length = 369 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 154/342 (45%), Positives = 234/342 (68%), Gaps = 9/342 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + + +G+GGAG SFRREKFI FGGPDGG+GG GG++++ NLNTLIDFR Sbjct: 1 MKFVDEVTIDVTAGNGGAGCASFRREKFIPFGGPDGGNGGHGGNIFVVGDRNLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + + A++GE G ++ GA GED+VL VPVGT + + + I +L ++I+LA G Sbjct: 61 YIRRYTARNGEAGRGSDQFGAAGEDIVLRVPVGTIITDTETGEKIAELLVHDEKILLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN H+K+STN+AP PG G+ K + L+L+++AD+G++G+PNAGKST +A+++ Sbjct: 121 GDGGFGNLHYKTSTNRAPRQKTPGWPGEVKNLKLELRVLADVGLLGMPNAGKSTLIAAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G + F++ADIPG+I+ A +GAG+G RFL+H +RT V Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVGPSQSFVVADIPGLIEGASEGAGLGHRFLRHLQRTRV 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + ++NV Q I+ EL Y+ L +K + L+++D V + A + Sbjct: 241 LLHMIDMAPFDDNVDPVAQAKAIVKELKKYDPALYEKPRWLVLNKLDMVPVEQRAALVKD 300 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + G V FE S++T G ++ ++ + S++ + E Sbjct: 301 FVKRMRWKGPV-FEISALTREGCQGLIHAIYSHVASLQEQPE 341 >gi|53720612|ref|YP_109598.1| GTPase ObgE [Burkholderia pseudomallei K96243] gi|53726077|ref|YP_104067.1| GTPase ObgE [Burkholderia mallei ATCC 23344] gi|67643605|ref|ZP_00442350.1| Obg family GTPase CgtA [Burkholderia mallei GB8 horse 4] gi|76812026|ref|YP_334893.1| GTPase ObgE [Burkholderia pseudomallei 1710b] gi|121598650|ref|YP_991794.1| GTPase ObgE [Burkholderia mallei SAVP1] gi|124384106|ref|YP_001027287.1| GTPase ObgE [Burkholderia mallei NCTC 10229] gi|126448355|ref|YP_001082776.1| GTPase ObgE [Burkholderia mallei NCTC 10247] gi|126451715|ref|YP_001067761.1| GTPase ObgE [Burkholderia pseudomallei 1106a] gi|166998607|ref|ZP_02264465.1| Obg family GTPase CgtA [Burkholderia mallei PRL-20] gi|167721312|ref|ZP_02404548.1| GTPase ObgE [Burkholderia pseudomallei DM98] gi|167817500|ref|ZP_02449180.1| GTPase ObgE [Burkholderia pseudomallei 91] gi|167825902|ref|ZP_02457373.1| GTPase ObgE [Burkholderia pseudomallei 9] gi|167847388|ref|ZP_02472896.1| GTPase ObgE [Burkholderia pseudomallei B7210] gi|167895976|ref|ZP_02483378.1| GTPase ObgE [Burkholderia pseudomallei 7894] gi|167904361|ref|ZP_02491566.1| GTPase ObgE [Burkholderia pseudomallei NCTC 13177] gi|167912621|ref|ZP_02499712.1| GTPase ObgE [Burkholderia pseudomallei 112] gi|167920568|ref|ZP_02507659.1| GTPase ObgE [Burkholderia pseudomallei BCC215] gi|217420562|ref|ZP_03452067.1| GTP-binding protein, GTP1/OBG family [Burkholderia pseudomallei 576] gi|226196844|ref|ZP_03792423.1| GTP-binding protein, GTP1/OBG family [Burkholderia pseudomallei Pakistan 9] gi|242318073|ref|ZP_04817089.1| Obg family GTPase CgtA [Burkholderia pseudomallei 1106b] gi|254178945|ref|ZP_04885599.1| GTP-binding protein, GTP1/OBG family [Burkholderia mallei ATCC 10399] gi|254190989|ref|ZP_04897495.1| GTP-binding protein, GTP1/OBG family [Burkholderia pseudomallei Pasteur 52237] gi|254199131|ref|ZP_04905546.1| GTP-binding protein, GTP1/OBG family [Burkholderia pseudomallei S13] gi|254202788|ref|ZP_04909151.1| GTP-binding protein, GTP1/OBG family [Burkholderia mallei FMH] gi|254208130|ref|ZP_04914480.1| GTP-binding protein, GTP1/OBG family [Burkholderia mallei JHU] gi|254261976|ref|ZP_04953030.1| Obg family GTPase CgtA [Burkholderia pseudomallei 1710a] gi|254299340|ref|ZP_04966790.1| GTP-binding protein, GTP1/OBG family [Burkholderia pseudomallei 406e] gi|254357666|ref|ZP_04973940.1| GTP-binding protein, GTP1/OBG family [Burkholderia mallei 2002721280] gi|81823922|sp|Q62GV4|OBG_BURMA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|81824654|sp|Q63QM0|OBG_BURPS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|123597925|sp|Q3JNG0|OBG_BURP1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266700|sp|A3MR90|OBG_BURM7 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266701|sp|A2S5R8|OBG_BURM9 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266702|sp|A1V0P1|OBG_BURMS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266703|sp|A3NZJ0|OBG_BURP0 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|52211026|emb|CAH37014.1| putative conserved GTP-binding protein [Burkholderia pseudomallei K96243] gi|52429500|gb|AAU50093.1| GTP-binding protein, GTP1/OBG family [Burkholderia mallei ATCC 23344] gi|76581479|gb|ABA50954.1| GTP-binding protein, GTP1/OBG family [Burkholderia pseudomallei 1710b] gi|121227460|gb|ABM49978.1| GTP-binding protein, GTP1/OBG family [Burkholderia mallei SAVP1] gi|124292126|gb|ABN01395.1| Obg family GTPase CgtA [Burkholderia mallei NCTC 10229] gi|126225357|gb|ABN88897.1| GTP-binding protein, GTP1/OBG family [Burkholderia pseudomallei 1106a] gi|126241225|gb|ABO04318.1| Obg family GTPase CgtA [Burkholderia mallei NCTC 10247] gi|147747035|gb|EDK54112.1| GTP-binding protein, GTP1/OBG family [Burkholderia mallei FMH] gi|147752024|gb|EDK59091.1| GTP-binding protein, GTP1/OBG family [Burkholderia mallei JHU] gi|148026730|gb|EDK84815.1| GTP-binding protein, GTP1/OBG family [Burkholderia mallei 2002721280] gi|157808886|gb|EDO86056.1| GTP-binding protein, GTP1/OBG family [Burkholderia pseudomallei 406e] gi|157938663|gb|EDO94333.1| GTP-binding protein, GTP1/OBG family [Burkholderia pseudomallei Pasteur 52237] gi|160694859|gb|EDP84867.1| GTP-binding protein, GTP1/OBG family [Burkholderia mallei ATCC 10399] gi|169656961|gb|EDS88358.1| GTP-binding protein, GTP1/OBG family [Burkholderia pseudomallei S13] gi|217395974|gb|EEC35991.1| GTP-binding protein, GTP1/OBG family [Burkholderia pseudomallei 576] gi|225931104|gb|EEH27112.1| GTP-binding protein, GTP1/OBG family [Burkholderia pseudomallei Pakistan 9] gi|238524979|gb|EEP88409.1| Obg family GTPase CgtA [Burkholderia mallei GB8 horse 4] gi|242141312|gb|EES27714.1| Obg family GTPase CgtA [Burkholderia pseudomallei 1106b] gi|243065289|gb|EES47475.1| Obg family GTPase CgtA [Burkholderia mallei PRL-20] gi|254220665|gb|EET10049.1| Obg family GTPase CgtA [Burkholderia pseudomallei 1710a] Length = 372 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 155/333 (46%), Positives = 226/333 (67%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V++ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVYVIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+D+ L +PVGT + + D LI DL + Q++++A G Sbjct: 61 YAKKHMARNGENGRGSDCYGKGGDDITLRMPVGTVINDMDTGELIADLTEHDQKVLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPGKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E V A + I+ EL Y+ L +K + L+++D V D + + Sbjct: 241 LLHLVDLAPFDERVDPVAEARAIVGELRKYDESLYEKPRWLVLNKLDMVPEDERRARVAD 300 Query: 296 LATQCGQV--PFEFSSITGHGIPQILECLHDKI 326 + G FE S++TG G ++ +HD + Sbjct: 301 FIERFGWTGPVFEISALTGQGCEGLVYAIHDYL 333 >gi|39998303|ref|NP_954254.1| GTPase ObgE [Geobacter sulfurreducens PCA] gi|81701033|sp|Q747Q2|OBG_GEOSL RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|39985249|gb|AAR36604.1| GTP-binding protein, GTP1/OBG family [Geobacter sulfurreducens PCA] gi|298507239|gb|ADI85962.1| ribosome biogenesis GTPase ObgE [Geobacter sulfurreducens KN400] Length = 338 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 156/336 (46%), Positives = 227/336 (67%), Gaps = 14/336 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE K++++SG GGAG +SFRREKFI FGGP+GG GGRGGDV + SNL+TL+D R Sbjct: 1 MQFIDEVKIHVQSGHGGAGCVSFRREKFIPFGGPNGGDGGRGGDVIFRVDSNLSTLLDLR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+ H KA G+ GM ++R GA GED+V+ VP GT + + + ++ DL G+ I+L G Sbjct: 61 YRPHLKAGSGKNGMGKDRHGAGGEDLVIPVPPGTIIKDAETGEILADLVTAGEEIVLLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F +STN+AP +A PG +++ + L+LKL+AD+G++G PN GKS+F+ V+ Sbjct: 121 GRGGQGNARFATSTNRAPKFAQPGEPEEQRWLRLELKLLADVGLLGFPNVGKSSFITRVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V + Y+ F++ADIPGII+ A +GAG+G RFLKH ERT V Sbjct: 181 AARPKIADYPFTTLKPNLGVVPYKNYRSFVIADIPGIIEGASEGAGLGHRFLKHVERTTV 240 Query: 240 LLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ + + Y+ + EL+ ++ EL K +IV ++++D A ++N Sbjct: 241 LLHVLDLSWMPDRDPIREYEALNRELALFSPELADKRQIVVVNKMDLP-----AVRENLP 295 Query: 297 AT-----QCGQVPFEFSSITGHGIPQILECLHDKIF 327 A + G F S+ TG GI +L+ + ++ Sbjct: 296 AVLPWFRERGLAVFPLSAATGEGISPLLDEIARSLW 331 >gi|238026155|ref|YP_002910386.1| GTPase ObgE [Burkholderia glumae BGR1] gi|237875349|gb|ACR27682.1| GTP1/OBG subdomain protein [Burkholderia glumae BGR1] Length = 373 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 156/333 (46%), Positives = 226/333 (67%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V+ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVYAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+D+ L +PVGT + + D LI DL + Q++++A G Sbjct: 61 YAKKHLARNGENGRGSDCYGKGGDDITLRMPVGTVITDLDTGELIADLTEHEQKVLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTEGKPGERRMLRLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT V Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPSKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGV 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E V A I+ EL Y+ L +K + L+++D V D A + + Sbjct: 241 LLHLVDLAPFDEGVDPVAEATAIVGELRKYDEALYQKPRWLVLNKLDMVPEDERAARVAD 300 Query: 296 LATQCGQ--VPFEFSSITGHGIPQILECLHDKI 326 ++ G FE S++TG G ++ ++D + Sbjct: 301 FVSRFGWDGPVFEISALTGQGCENLVYAVYDYL 333 >gi|330811827|ref|YP_004356289.1| GTPase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379935|gb|AEA71285.1| GTPase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 407 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 145/288 (50%), Positives = 209/288 (72%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +++GDGG G +SFRREKFIE GGP+GG GG GG +++ A NLNTL+D+R Sbjct: 1 MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSIYMLADENLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HF A+ G G + +G KGED++L VPVGT V + +I DL + GQR+++A G Sbjct: 61 YTRHFDAERGSNGGSTDCTGKKGEDLILRVPVGTTVIDSATQEVIGDLTKAGQRLLVAHG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G+++ + L++K++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGEQRDLKLEMKVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVDRWKSFVIADIPGLIEGASEGAGLGIRFLKHLSRTRL 240 Query: 240 LLHIV--SALEENVQA-AYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH+V + L+E A A + I++EL+ ++ L ++ + L++ D + Sbjct: 241 LLHLVDMAPLDETSAADAAEVIVNELTKFSPALAERDRWLVLNKCDQI 288 >gi|28868027|ref|NP_790646.1| GTP-binding protein, GTP1/Obg family [Pseudomonas syringae pv. tomato str. DC3000] gi|213971069|ref|ZP_03399189.1| GTP-binding protein, GTP1/Obg family [Pseudomonas syringae pv. tomato T1] gi|301384208|ref|ZP_07232626.1| GTPase ObgE [Pseudomonas syringae pv. tomato Max13] gi|302060868|ref|ZP_07252409.1| GTPase ObgE [Pseudomonas syringae pv. tomato K40] gi|302132867|ref|ZP_07258857.1| GTPase ObgE [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851263|gb|AAO54341.1| GTP-binding protein, GTP1/Obg family [Pseudomonas syringae pv. tomato str. DC3000] gi|213924177|gb|EEB57752.1| GTP-binding protein, GTP1/Obg family [Pseudomonas syringae pv. tomato T1] gi|331018362|gb|EGH98418.1| GTPase CgtA [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 407 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 151/324 (46%), Positives = 218/324 (67%), Gaps = 6/324 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +++GDGG G +SFRREKFIE GGP+GG GG GG V++ A NLNTL+D+R Sbjct: 1 MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSVFMIADVNLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HF A+ G G + +G KGE++VL VPVGT + + +I DL ++GQR+++A G Sbjct: 61 YTRHFDAERGANGGSADCTGRKGEELVLRVPVGTTIIDATTQEIIGDLTKDGQRLMVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP +PG G ++ + L+LK++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTSPGKPGDQRDLKLELKVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVDRWKSFVVADIPGLIEGASDGAGLGIRFLKHLARTRL 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V E + A + I+ EL ++ L ++ + L++ D + + +K E+ Sbjct: 241 LLHLVDMAPLDETSAPDAAEVIVSELEKFSPSLAERDRWLVLNKCDQILEEEQEARKQEI 300 Query: 297 ATQCGQV--PFEFSSITGHGIPQI 318 + G + S+I G Q+ Sbjct: 301 VDRLGWTGPVYVISAIAKEGTEQL 324 >gi|320353208|ref|YP_004194547.1| GTP-binding protein Obg/CgtA [Desulfobulbus propionicus DSM 2032] gi|320121710|gb|ADW17256.1| GTP-binding protein Obg/CgtA [Desulfobulbus propionicus DSM 2032] Length = 342 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 156/336 (46%), Positives = 224/336 (66%), Gaps = 6/336 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DEAK ++++GDGG G +SFRREK++ GGP+GG GG+GGDV++ A NL +LIDFR Sbjct: 1 MGFVDEAKFFVKAGDGGNGCVSFRREKYVPKGGPNGGDGGKGGDVFLVADRNLRSLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+ HFKA+ G G ++ G G+D ++ VPVG+ + + + +++ DL + GQ + A G Sbjct: 61 YRSHFKAESGLGGQGSDKHGRGGKDSIIRVPVGSVIKDAETGTVLADLIEPGQVFLAAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F +STN+AP A PG G+E+ + ++LKL+AD+G+IGLPNAGKST L+ ++ Sbjct: 121 GRGGLGNARFATSTNRAPRKATPGQPGEERWLVIELKLLADVGLIGLPNAGKSTLLSKLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PKIA YPFTTL P LG++ Y E I+ADIPG+I+ AHQG G+G +FL+H ERT + Sbjct: 181 AANPKIAAYPFTTLEPQLGVLHLKYSEPCIIADIPGLIEGAHQGVGLGHQFLRHIERTSI 240 Query: 240 LLHIVSALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LLH++ A E Q YQ + EL+AY EL + ++ L++ID +D + LA K A Sbjct: 241 LLHLIDASTEAEQPLQDYQVLARELAAYKQELLDRTHLIVLNKIDLIDGERLAEVKELFA 300 Query: 298 TQCGQVPFE-FSSITGHGIPQILECLHDKIFSIRGE 332 +P + S+ TG G+ + L D + R E Sbjct: 301 AV--HLPVQVISAETGEGLESLKALLGDLLEEQRAE 334 >gi|258545263|ref|ZP_05705497.1| GTP-binding protein Obg/CgtA [Cardiobacterium hominis ATCC 15826] gi|258519476|gb|EEV88335.1| GTP-binding protein Obg/CgtA [Cardiobacterium hominis ATCC 15826] Length = 372 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 155/339 (45%), Positives = 228/339 (67%), Gaps = 14/339 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++Y+R+G GG G +SFRREK++ FGGPDGG GG GG V++ A +NTL DFR Sbjct: 21 MKFVDEAQIYVRAGKGGNGIVSFRREKYVPFGGPDGGDGGDGGSVYLVAQDGINTLADFR 80 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F+A +G G RN+ G+ GED+++ VPVGTQVF +D LI DL +GQR+++A G Sbjct: 81 FNRSFQAANGRPGEGRNKRGSSGEDLLVPVPVGTQVFVDDTDELIGDLTVDGQRLLVAQG 140 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN +KSSTN+AP PG G+E+ + L+LKL+AD+G++G+PNAGKST ++ V+ Sbjct: 141 GFHGLGNTRYKSSTNRAPRQCKPGTEGEERYLRLELKLLADVGLLGMPNAGKSTLISRVS 200 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G + F++ADIPG+I+ A +GAG+G +FL+H RT + Sbjct: 201 AARPKIADYPFTTLHPNLGVVRVGMLQSFVMADIPGLIEGAAEGAGLGHQFLRHLARTRL 260 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT-LARKKN 294 LLH++ +N ++ + EL Y++ K + L+++DT+ + AR + Sbjct: 261 LLHVLDCSPLSDSQNPVRDFEQVSVELEKYDAVFADKPRWLVLNKMDTLTPEEGEARAQE 320 Query: 295 ELATQCGQVP-FEFSSITG-------HGIPQILECLHDK 325 +A Q P + S+ TG I Q LE + D+ Sbjct: 321 IVAALAWQGPVYRISAETGLNTETLCRDIMQALERMDDE 359 >gi|289625170|ref|ZP_06458124.1| GTPase ObgE [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651354|ref|ZP_06482697.1| GTPase ObgE [Pseudomonas syringae pv. aesculi str. 2250] gi|330869166|gb|EGH03875.1| GTPase CgtA [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 407 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 151/325 (46%), Positives = 220/325 (67%), Gaps = 8/325 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +++GDGG G +SFRREKFIE GGP+GG GG GG +++ A NLNTL+D+R Sbjct: 1 MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSIFMVADVNLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HF A+ G G + +G KGE++VL VPVGT + + +I DL ++GQR+++A G Sbjct: 61 YTRHFDAERGSNGGSADCTGRKGEELVLRVPVGTTIIDATTQEIIGDLTKDGQRLMVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G ++ + L+LK++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGDQRDLKLELKVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVDRWKSFVVADIPGLIEGASDGAGVGIRFLKHLARTRL 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V + E + A + I++EL ++ L ++ + L++ D + + +K E+ Sbjct: 241 LLHLVDMVPLDESSAPDAAEVIVNELEKFSPSLAERDRWLVLNKCDQILEEEQEARKQEI 300 Query: 297 ATQ---CGQVPFEFSSITGHGIPQI 318 + G V + S+I G Q+ Sbjct: 301 VDRLEWTGPV-YVISAIAKEGTEQL 324 >gi|315224780|ref|ZP_07866601.1| obg family GTPase CgtA [Capnocytophaga ochracea F0287] gi|314945183|gb|EFS97211.1| obg family GTPase CgtA [Capnocytophaga ochracea F0287] Length = 332 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 155/326 (47%), Positives = 219/326 (67%), Gaps = 2/326 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D K+Y SG GGAG + REKF+ GGPDGG GGRGG + ++ +L TLI F++Q Sbjct: 6 FTDYVKIYAASGKGGAGSMHLHREKFVPKGGPDGGDGGRGGHIILRGNKHLWTLIHFKFQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 QHF+A+HGE G GA G+D+ L VP+GT V + + ++ ++ ++GQ II GG Sbjct: 66 QHFRAEHGEAGGANRSFGADGKDITLEVPLGTIVKDAETGEVLFEITEDGQEIIALRGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+++TNQ P YA PG+ G+E+ + L+LK++AD+G +G PNAGKST L+ +T A Sbjct: 126 GGLGNWHFRTATNQTPRYAQPGLPGEERELLLELKVLADVGFVGFPNAGKSTLLSVITSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI DYPFTTL PNLGIV+ Y+ F++ADIPGII+ A +G G+G FL+H ER VLL Sbjct: 186 KPKIGDYPFTTLKPNLGIVQNRDYQSFVVADIPGIIEGAAEGKGLGHYFLRHIERNSVLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A +++ A Y +L+EL YN EL K ++ +S+ D +D + + E+AT G Sbjct: 246 FLIPADSKDIIAEYHILLNELKEYNPELLDKDRLIAISKSDMLDDELTEAIRQEVATGLG 305 Query: 302 QVPFEF-SSITGHGIPQILECLHDKI 326 PF F SS++G GI Q+ + L + I Sbjct: 306 DTPFLFISSVSGKGIQQLKDKLWEMI 331 >gi|167580499|ref|ZP_02373373.1| GTPase ObgE [Burkholderia thailandensis TXDOH] Length = 372 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 155/333 (46%), Positives = 227/333 (68%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V++ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVYVIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+DV L +PVGT + + D LI DL + Q++++A G Sbjct: 61 YAKKHMARNGENGRGSDCYGKGGDDVTLRMPVGTVINDMDTGELIADLTEHDQKVLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPGKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E+V A + I+ EL Y+ L +K + L+++D V D + + Sbjct: 241 LLHLVDLAPFDESVDPVAEAKAIVGELRKYDESLYQKPRWLVLNKLDMVPEDERCTRVAD 300 Query: 296 LATQCGQV--PFEFSSITGHGIPQILECLHDKI 326 + G FE S++TG G ++ ++D + Sbjct: 301 FIERFGWTGPVFEISALTGQGCEGLVYAIYDYL 333 >gi|307296515|ref|ZP_07576338.1| GTP-binding protein Obg/CgtA [Sphingobium chlorophenolicum L-1] gi|306878029|gb|EFN09253.1| GTP-binding protein Obg/CgtA [Sphingobium chlorophenolicum L-1] Length = 363 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 160/338 (47%), Positives = 225/338 (66%), Gaps = 16/338 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M FLD+AK++I+SG GG G +SFRREK++E+GGPDGG+GG+GGD+ +A + LNTLIDFR Sbjct: 1 MHFLDQAKIFIKSGWGGPGAVSFRREKYVEYGGPDGGNGGKGGDIIFEAVAGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVF----------EEDGI-----SLI 105 Y QHFKAQ G G +NR GA GED+++ VPVGTQ+ +EDG L+ Sbjct: 61 YTQHFKAQRGGGGAGKNRYGAGGEDLIIKVPVGTQILSDPTPIEGSEDEDGTMEYEQELL 120 Query: 106 CDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGII 165 D + GQR++L GG+GG GN +K+STN+AP G G+E +WL+LKL+AD+G++ Sbjct: 121 ADFTEVGQRVVLLRGGDGGRGNLSYKTSTNRAPRQHGTGWPGKEMYVWLRLKLLADVGLV 180 Query: 166 GLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAG 225 G+PNAGKSTF+ VT K K+ Y FTT P LG+V +EF+LADIPG+I+ A +GAG Sbjct: 181 GMPNAGKSTFINQVTNTKAKVGAYAFTTTKPQLGVVLHRDREFVLADIPGLIEGAAEGAG 240 Query: 226 IGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 IGDRFL H ER VLLH++ A ++ ++ + DEL+AY L +K +IV L++ D + Sbjct: 241 IGDRFLGHIERCRVLLHLIDATGDDPVEQFRIVQDELTAYGGGLDEKPQIVALNKGDLLG 300 Query: 286 SDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECL 322 + + +L + + F S TG G+P +L+ + Sbjct: 301 QELMEDIAEQLRDEAEVEDVFIISGATGEGVPALLDAV 338 >gi|134294671|ref|YP_001118406.1| GTPase ObgE [Burkholderia vietnamiensis G4] gi|261266707|sp|A4JBB8|OBG_BURVG RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|134137828|gb|ABO53571.1| GTP1/OBG sub domain protein [Burkholderia vietnamiensis G4] Length = 370 Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 156/333 (46%), Positives = 227/333 (68%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG+V+ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGNVYAIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+D+ L +PVGT V + D LI DL + Q+++LA G Sbjct: 61 YAKKHMARNGENGRGSDCYGKGGDDITLRMPVGTVVTDMDTGELIADLTEHDQQVMLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GSGGLGNLHFKSSTNRAPRQKTDGKPGERRMLRLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT V Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPSKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGV 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E+V A + I+ EL Y+ L +K + L+++D V D + + Sbjct: 241 LLHLVDLAPFDESVDPVAEAKAIVGELRKYDEALYEKPRWLVLNKLDMVPEDERDARVAD 300 Query: 296 LATQCGQ--VPFEFSSITGHGIPQILECLHDKI 326 + G F+ S++TG G + ++D + Sbjct: 301 FLERFGWDGPVFQISALTGQGCEALCYAIYDYL 333 >gi|297537724|ref|YP_003673493.1| GTP-binding protein Obg/CgtA [Methylotenera sp. 301] gi|297257071|gb|ADI28916.1| GTP-binding protein Obg/CgtA [Methylotenera sp. 301] Length = 362 Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 157/340 (46%), Positives = 229/340 (67%), Gaps = 7/340 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + I +GDGG G +FRREK+ GGP GG GGRGG + I+A N+NTL+D+R Sbjct: 1 MKFIDEATIKIYAGDGGNGVATFRREKYEPMGGPSGGDGGRGGSIIIEADRNINTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+AQ GE G GAKGED+VL VPVGT + ++ ++ DL + GQR +A G Sbjct: 61 YTRTFRAQRGENGRSAECYGAKGEDMVLRVPVGTVISDKASEQMLVDLSEHGQRAQMASG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP G +G+E ++L+LK++AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GKGGLGNVHFKSSLNRAPRQCTKGDVGEEFELYLELKVLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL+PNLG+V+ + + F++ADIPGII+ A +GAG+G +FL+H +RT + Sbjct: 181 AAKPKVADYPFTTLHPNLGVVRVDTERSFVIADIPGIIEGAAEGAGLGHQFLRHLQRTSL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKN 294 LLH+V + +E V Y+ I++EL Y+ L K + L++ID + +S + ++ Sbjct: 241 LLHLVDIAPFDEAVDPVYEAKAIVEELRKYDEALYDKPRWLVLNKIDMLQESQEVVKQFV 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + G+V F S+I+G G ++ + I + E E Sbjct: 301 KDYGWKGRV-FAISAISGVGCKELTYAIMQHIEENKREAE 339 >gi|315127753|ref|YP_004069756.1| GTPase ObgE [Pseudoalteromonas sp. SM9913] gi|315016267|gb|ADT69605.1| GTPase ObgE [Pseudoalteromonas sp. SM9913] Length = 383 Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 150/307 (48%), Positives = 215/307 (70%), Gaps = 6/307 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE ++ +GDGG+G +SFRREK++ GGPDGG GG GG V++QA NLNTLID++ Sbjct: 1 MKFVDEVEIRAEAGDGGSGIVSFRREKYVPDGGPDGGDGGDGGSVYLQADENLNTLIDYQ 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ +A+ G G RN +G KGED+++ VPVGT++ + D + DL Q+GQRI++A G Sbjct: 61 FERFHRAERGTNGQSRNCTGKKGEDLIVKVPVGTRIIDVDTQESLGDLTQDGQRIVVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSSTN+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GFHGLGNARFKSSTNRAPRQKTLGTPGEVRNLKLELMLLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V+ E K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPNLGVVRPEANKSFVIADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALEEN----VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHI+ + + V A+ I++EL Y+ +L +K + ++ID + D + Sbjct: 241 LLHIIDVMPVDGSNPVDNAF-AIINELHQYSPKLAEKPRWLVFNKIDLLPEDEAKALCEQ 299 Query: 296 LATQCGQ 302 +A + G+ Sbjct: 300 IAEELGE 306 >gi|167618608|ref|ZP_02387239.1| GTPase ObgE [Burkholderia thailandensis Bt4] Length = 372 Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 155/333 (46%), Positives = 227/333 (68%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V++ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVYVIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+DV L +PVGT + + D LI DL + Q++++A G Sbjct: 61 YAKKHMARNGENGRGSDCYGKGGDDVTLRMPVGTVINDMDTGELIADLTEHDQKVLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPGKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E+V A + I+ EL Y+ L +K + L+++D V D + + Sbjct: 241 LLHLVDLAPFDESVDPVAEAKAIVGELRKYDESLYQKPRWLVLNKLDMVPEDERCTRVVD 300 Query: 296 LATQCGQV--PFEFSSITGHGIPQILECLHDKI 326 + G FE S++TG G ++ ++D + Sbjct: 301 FIERFGWTGPVFEISALTGQGCEGLVYAIYDYL 333 >gi|124265706|ref|YP_001019710.1| hypothetical protein Mpe_A0513 [Methylibium petroleiphilum PM1] gi|261266855|sp|A2SD36|OBG_METPP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|124258481|gb|ABM93475.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 370 Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 147/335 (43%), Positives = 234/335 (69%), Gaps = 8/335 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G+GG G +SFRREKFI FGGP+GG GGRGG V+ A NLNTLIDFR Sbjct: 1 MKFVDEAYIDVIAGNGGNGCVSFRREKFIPFGGPNGGDGGRGGSVYAVADRNLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + +A+HGE G ++ GA ED+V+ +PVGT + + + + + +L + G+RI++A G Sbjct: 61 FARRHEARHGEHGRGSDQFGAAAEDIVMRMPVGTIISDAETGAPVAELLEPGERILIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN H+K+STN+AP PG G++K + L+L+++AD+G++G+PNAGKST +++++ Sbjct: 121 GDGGFGNLHYKTSTNRAPRQKTPGWPGEQKKLKLELRVLADVGLLGMPNAGKSTLISAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G ++ F++AD+PG+I+ A +GAG+G RFL+H +RT + Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVGPEQSFVVADVPGLIEGAAEGAGLGHRFLRHLQRTRL 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ + + A + I+ EL Y+ L K + L+++D V ++ A + + Sbjct: 241 LLHMIDMAPFDDTDPVAQAKAIVAELKKYDPALYDKPRWLVLNKLDVVPAEERAARVKDF 300 Query: 297 ATQC---GQVPFEFSSITGHGIPQILECLHDKIFS 328 + G V FE S++T G +++ ++ + S Sbjct: 301 VKRFKWKGPV-FEISALTREGCETLVQAIYQHVAS 334 >gi|83720969|ref|YP_441689.1| GTPase ObgE [Burkholderia thailandensis E264] gi|123537588|sp|Q2SZG0|OBG_BURTA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|83654794|gb|ABC38857.1| GTP-binding protein, GTP1/OBG family [Burkholderia thailandensis E264] Length = 372 Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 155/333 (46%), Positives = 227/333 (68%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V++ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVYVIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+DV L +PVGT + + D LI DL + Q++++A G Sbjct: 61 YAKKHMARNGENGRGSDCYGKGGDDVTLRMPVGTVINDMDTGELIADLTEHDQKVLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPGKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E+V A + I+ EL Y+ L +K + L+++D V D + + Sbjct: 241 LLHLVDLAPFDESVDPVAEAKAIVGELRKYDESLYQKPRWLVLNKLDMVPEDERRTRVVD 300 Query: 296 LATQCGQV--PFEFSSITGHGIPQILECLHDKI 326 + G FE S++TG G ++ ++D + Sbjct: 301 FIERFGWTGPVFEISALTGQGCEGLVYAIYDYL 333 >gi|95931027|ref|ZP_01313755.1| Small GTP-binding protein domain [Desulfuromonas acetoxidans DSM 684] gi|95132923|gb|EAT14594.1| Small GTP-binding protein domain [Desulfuromonas acetoxidans DSM 684] Length = 361 Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 154/334 (46%), Positives = 224/334 (67%), Gaps = 4/334 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+ K++I+SGDGG G +SFRREKFI GGPDGG GG GGDV++ S+L TL+DFR Sbjct: 18 MRFVDQVKIHIKSGDGGRGCMSFRREKFIPRGGPDGGDGGDGGDVYLHTDSSLTTLLDFR 77 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y H+KA +G GM +N G G+D+ + VP GT V++ D L+ D+ + GQ L G Sbjct: 78 YNAHYKATNGAPGMGKNMHGKTGDDLTIHVPPGTLVYDADSDELLADMVEPGQTTKLLSG 137 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F +STN+AP + PG G+ + L+LKL+AD+G++G+PNAGKST + +V+ Sbjct: 138 GQGGRGNARFATSTNRAPRHCQPGTPGETLTLRLELKLLADVGLVGMPNAGKSTLIRAVS 197 Query: 181 RAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V+ G+K F++ADIPG+I+ A G G+G RFL+H ERT Sbjct: 198 AARPKVADYPFTTLVPNLGVVRYGGFKTFVMADIPGLIEGASDGQGLGTRFLRHVERTDF 257 Query: 240 LLHIV---SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LH+V SA E+N+ + I EL +++ L K ++V L++ D D A L Sbjct: 258 FLHLVDLTSAPEDNLLEQFDIINGELKRHDATLANKPQLVVLTKNDVTDVRERAEIARPL 317 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 Q G F S+I+G G+ +++E + ++ +++ Sbjct: 318 FEQRGYQVFTISAISGDGLKELVEEVGTRLDALK 351 >gi|134280394|ref|ZP_01767105.1| GTP-binding protein, GTP1/OBG family [Burkholderia pseudomallei 305] gi|134248401|gb|EBA48484.1| GTP-binding protein, GTP1/OBG family [Burkholderia pseudomallei 305] Length = 372 Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 155/333 (46%), Positives = 225/333 (67%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V++ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVYVIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+D+ L +PVGT + + D LI DL + Q+ ++A G Sbjct: 61 YAKKHMARNGENGRGSDCYGKGGDDITLRMPVGTVINDMDTGELIADLTEHDQKALVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPGKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E V A + I+ EL Y+ L +K + L+++D V D + + Sbjct: 241 LLHLVDLAPFDERVDPVAEARAIVGELRKYDESLYEKPRWLVLNKLDMVPEDERRARVAD 300 Query: 296 LATQCGQV--PFEFSSITGHGIPQILECLHDKI 326 + G FE S++TG G ++ +HD + Sbjct: 301 FIERFGWTGPVFEISALTGQGCEGLVYAIHDYL 333 >gi|225024079|ref|ZP_03713271.1| hypothetical protein EIKCOROL_00947 [Eikenella corrodens ATCC 23834] gi|224943104|gb|EEG24313.1| hypothetical protein EIKCOROL_00947 [Eikenella corrodens ATCC 23834] Length = 379 Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 154/340 (45%), Positives = 228/340 (67%), Gaps = 22/340 (6%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G +SFRREK++ GGPDGG GGRGG V+ A+ N+NTL+++R Sbjct: 1 MKFIDEAKIEVAAGRGGNGAVSFRREKYVPRGGPDGGDGGRGGSVFAVASENVNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++AQ+GEKG +R GA +D+ L +PVGT + + D ++ DL + GQR+ LA G Sbjct: 61 FVKRYQAQNGEKGHGSDRYGAGADDIELQMPVGTLIRDADTGEIVADLTRHGQRVCLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP A PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQATPGEPGEARRLLLELKVLADVGLLGMPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 A+PK+ADYPFTTL+PNLG+V+ EG + F++ADIPG+I+ A +GAG+G RFLKH RT Sbjct: 181 AARPKVADYPFTTLHPNLGVVRVDEG-QSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTG 239 Query: 239 VLLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 +LLH+V + +E V A + I++EL Y+ EL K + L+++D + + A +K Sbjct: 240 LLLHVVDLAPFDEAVSPAAEALAIINELKKYDDELFGKPRWLVLNKLDMLTPEEAAERKA 299 Query: 295 ELATQCG-------------QVP--FEFSSITGHGIPQIL 319 E G Q P FE S++ G +++ Sbjct: 300 EFLEAVGWDYPAPGEPGFNWQTPRLFEISALAHQGTQELV 339 >gi|254785132|ref|YP_003072560.1| GTPase ObgE [Teredinibacter turnerae T7901] gi|237686134|gb|ACR13398.1| GTP-binding protein Obg/CgtA [Teredinibacter turnerae T7901] Length = 395 Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 159/332 (47%), Positives = 225/332 (67%), Gaps = 14/332 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA +++++G GG G +SFRREKFI GGPDGG GG GG V+++A NLNTLID+R Sbjct: 1 MKFVDEAPIFVQAGKGGNGCLSFRREKFIAKGGPDGGDGGDGGSVYLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ+ + A++GE G RN +GAKG+D+VL VPVGT V + D I DL G R+++A G Sbjct: 61 YQRRYAAENGESGRGRNCTGAKGDDLVLKVPVGTSVLDADSGEQIGDLTAAGDRLLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP +PG G+ K + L++K++AD+G++GLPNAGKSTF+++V+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQTSPGSEGEAKNLKLEMKVLADVGMLGLPNAGKSTFISAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL P+LG+VK + ++ F++ADIPG+I+ A GAG+G RFLKH R V Sbjct: 181 AAKPKIADYPFTTLVPSLGVVKVQKHRSFVVADIPGLIEGAADGAGLGIRFLKHLTRCRV 240 Query: 240 LLHIV-------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 LLH+V S+ EN ++ I+ EL ++ L ++ + L++ D + + LA+ Sbjct: 241 LLHLVDCCPIDGSSPVENARS----IVRELENFSPTLAQRERWLVLNKTDLLTDEELAQV 296 Query: 293 KNELATQCG-QVP-FEFSSITGHGIPQILECL 322 K L + Q P + S+I G + E L Sbjct: 297 KQALVDELDWQGPVYGISAIGQQGTDVLCESL 328 >gi|167842008|ref|ZP_02468692.1| GTPase ObgE [Burkholderia thailandensis MSMB43] Length = 372 Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 154/335 (45%), Positives = 228/335 (68%), Gaps = 7/335 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V++ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVYVIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+D+ L +PVGT + + D LI DL + Q++++A G Sbjct: 61 YAKKHMARNGENGRGSDCYGKGGDDITLRMPVGTVINDMDTGELIADLTEHDQKVLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPGKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E+V A + I+ EL Y+ L +K + L+++D V D + + Sbjct: 241 LLHLVDLAPFDESVDPVAEAKAIVGELRKYDESLYEKPRWLVLNKLDMVPEDGRGARVAD 300 Query: 296 LATQCGQV--PFEFSSITGHGIPQILECLHDKIFS 328 + G FE S++TG G ++ ++D + + Sbjct: 301 FIERFGWTGPVFEISALTGQGCEGLVYAIYDYLVA 335 >gi|254423449|ref|ZP_05037167.1| GTP-binding protein Obg/CgtA [Synechococcus sp. PCC 7335] gi|196190938|gb|EDX85902.1| GTP-binding protein Obg/CgtA [Synechococcus sp. PCC 7335] Length = 355 Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 144/323 (44%), Positives = 219/323 (67%), Gaps = 1/323 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ + G GG G +FRREK++ GGP GG+GG+GG V + +NL TL+DFR Sbjct: 1 MQFIDQAEIEVEGGTGGDGLTAFRREKYVPAGGPSGGTGGKGGSVILATNTNLQTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y FKA+ GEKG +NR+GA GED+++ VP GT F+ D LI DL + Q +++APG Sbjct: 61 YAHRFKAKDGEKGGPKNRTGANGEDLIVEVPCGTLAFDLDTGELIGDLTEPNQSLVIAPG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP + GI G + + L+LKL+A++GIIGLPNAGKST +++++ Sbjct: 121 GKGGLGNKHFLSNRNRAPEMSQRGIGGMIRRVRLELKLLAEVGIIGLPNAGKSTLISTLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V++ + + ADIPG+I+ AH+G G+G FL+H ERT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVRKPTGDGTVFADIPGLIEGAHEGQGLGHDFLRHIERTKL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH+V + + YQ I EL+AY L + +I+ ++++D + + + + L+ Sbjct: 241 LLHLVDGTALDPVSDYQTIQQELNAYGRGLVGRPQILAINKVDALLDEEIDEIASRLSLL 300 Query: 300 CGQVPFEFSSITGHGIPQILECL 322 G+ F S+++ G ++L+ + Sbjct: 301 TGEKVFRISAVSRQGTDELLQAI 323 >gi|213962033|ref|ZP_03390298.1| Obg family GTPase CgtA [Capnocytophaga sputigena Capno] gi|213955386|gb|EEB66703.1| Obg family GTPase CgtA [Capnocytophaga sputigena Capno] Length = 332 Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 154/326 (47%), Positives = 219/326 (67%), Gaps = 2/326 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D K+Y SG GGAG + REKF+ GGPDGG GGRGG + ++ +L TLI F++Q Sbjct: 6 FTDYVKIYAASGKGGAGSMHLHREKFVPKGGPDGGDGGRGGHIILRGNKHLWTLIHFKFQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HF+A+HGE G GA G+D+ L VP+GT V + + ++ ++ ++GQ II GG Sbjct: 66 KHFQAEHGEAGGANRSFGADGKDITLEVPLGTIVKDAETEEVLFEITEDGQEIIALRGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+++TNQ P YA PG+ G+E+ + L+LK++AD+G +G PNAGKST L+ +T A Sbjct: 126 GGLGNWHFRTATNQTPRYAQPGLPGEERELLLELKVLADVGFVGFPNAGKSTLLSVITSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI DYPFTTL PNLGIV+ Y+ F++ADIPGII+ A +G G+G FL+H ER VLL Sbjct: 186 KPKIGDYPFTTLKPNLGIVQNRDYQSFVVADIPGIIEGAAEGKGLGHYFLRHIERNSVLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A +++ A Y +L+EL YN EL K ++ +S+ D +D + + + E+AT G Sbjct: 246 FLIPADSKDIIAEYHILLNELKEYNPELLDKDRLIAISKADMLDDELIEAIRQEVATGLG 305 Query: 302 QVPFEF-SSITGHGIPQILECLHDKI 326 PF F SS+ G GI Q+ + L + I Sbjct: 306 DTPFLFISSVAGKGIQQLKDKLWEMI 331 >gi|66043968|ref|YP_233809.1| GTPase ObgE [Pseudomonas syringae pv. syringae B728a] gi|71737979|ref|YP_273007.1| GTPase ObgE [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487509|ref|ZP_05641550.1| GTPase ObgE [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289674840|ref|ZP_06495730.1| GTPase ObgE [Pseudomonas syringae pv. syringae FF5] gi|298485386|ref|ZP_07003476.1| GTP-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|302188814|ref|ZP_07265487.1| GTPase ObgE [Pseudomonas syringae pv. syringae 642] gi|75503522|sp|Q4ZYK1|OBG_PSEU2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|123638254|sp|Q48NL2|OBG_PSE14 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|63254675|gb|AAY35771.1| GTP-binding protein, HSR1-related:GTP1/OBG subdomain [Pseudomonas syringae pv. syringae B728a] gi|71558532|gb|AAZ37743.1| GTP-binding protein, GTP1/Obg family [Pseudomonas syringae pv. phaseolicola 1448A] gi|298160084|gb|EFI01115.1| GTP-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320326223|gb|EFW82277.1| GTPase ObgE [Pseudomonas syringae pv. glycinea str. B076] gi|320330648|gb|EFW86625.1| GTPase ObgE [Pseudomonas syringae pv. glycinea str. race 4] gi|330891599|gb|EGH24260.1| GTPase CgtA [Pseudomonas syringae pv. mori str. 301020] gi|330901419|gb|EGH32838.1| GTPase CgtA [Pseudomonas syringae pv. japonica str. M301072PT] gi|330971966|gb|EGH72032.1| GTPase CgtA [Pseudomonas syringae pv. aceris str. M302273PT] gi|330977520|gb|EGH77466.1| GTPase CgtA [Pseudomonas syringae pv. aptata str. DSM 50252] gi|330988780|gb|EGH86883.1| GTPase CgtA [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008745|gb|EGH88801.1| GTPase CgtA [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 407 Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 151/325 (46%), Positives = 219/325 (67%), Gaps = 8/325 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +++GDGG G +SFRREKFIE GGP+GG GG GG +++ A NLNTL+D+R Sbjct: 1 MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSIFMVADVNLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HF A+ G G + +G KGE++VL VPVGT + + +I DL ++GQR+++A G Sbjct: 61 YTRHFDAERGSNGGSADCTGRKGEELVLRVPVGTTIIDATTQEIIGDLTKDGQRLMVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G ++ + L+LK++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGDQRDLKLELKVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVDRWKSFVVADIPGLIEGASDGAGLGIRFLKHLARTRL 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V E + A + I++EL ++ L ++ + L++ D + + +K E+ Sbjct: 241 LLHLVDMAPLDESSAPDAAEVIVNELEKFSPSLAERDRWLVLNKCDQILEEEQEARKQEI 300 Query: 297 ATQ---CGQVPFEFSSITGHGIPQI 318 + G V + S+I G Q+ Sbjct: 301 VDRLEWTGPV-YVISAIAKEGTEQL 324 >gi|237801843|ref|ZP_04590304.1| GTPase CgtA [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024701|gb|EGI04757.1| GTPase CgtA [Pseudomonas syringae pv. oryzae str. 1_6] Length = 407 Score = 271 bits (694), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 152/325 (46%), Positives = 218/325 (67%), Gaps = 8/325 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +++GDGG G +SFRREKFIE GGP+GG GG GG V++ A NLNTL+D+R Sbjct: 1 MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSVYMIADVNLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HF A+ G G + +G KGE++VL VPVGT + + +I DL ++GQR+++A G Sbjct: 61 YTRHFDAERGSNGGSADCTGRKGEELVLRVPVGTTIIDATTQEIIGDLTKDGQRLMVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G ++ + L+LK++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGDQRDLKLELKVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVDRWKSFVVADIPGLIEGASDGAGLGIRFLKHLARTRL 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V E + A + I+ EL ++ L ++ + L++ D + + +K E+ Sbjct: 241 LLHLVDMAPLDETSAPDAAEVIVSELEKFSPSLAERDRWLVLNKCDQILEEEQEARKQEI 300 Query: 297 ATQ---CGQVPFEFSSITGHGIPQI 318 + G V + S+I G Q+ Sbjct: 301 VDRLEWTGPV-YVISAIAKEGTEQL 324 >gi|186683451|ref|YP_001866647.1| GTPase ObgE [Nostoc punctiforme PCC 73102] gi|261277707|sp|B2IYX1|OBG_NOSP7 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|186465903|gb|ACC81704.1| small GTP-binding protein [Nostoc punctiforme PCC 73102] Length = 342 Score = 271 bits (694), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 151/325 (46%), Positives = 223/325 (68%), Gaps = 7/325 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+AK+ + +G GG G ++FRREK++ GGP GG+GGRGG V+ A NL TL+DFR Sbjct: 1 MQFIDQAKIEVEAGKGGDGIVAFRREKYVPTGGPSGGNGGRGGSVFFVADENLQTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y F+A+ G +G N +GA G+D+++ VP GT +++ + L+ DL + Q +++A G Sbjct: 61 YNHRFQAEKGTRGGPNNCTGAGGKDLIIEVPCGTTIYDAETGELLGDLTEPQQTLLIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP YA PG+ G+ K + L+LKL+A++GIIGLPNAGKST ++S++ Sbjct: 121 GKGGLGNQHFLSNRNRAPEYALPGLPGEIKQLRLELKLLAEVGIIGLPNAGKSTLISSLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V++ + + ADIPG+I A GAG+G FL+H ERT V Sbjct: 181 AARPKIADYPFTTLIPNLGVVRKPTGDGTVFADIPGLIAGASHGAGLGHDFLRHIERTRV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ A ++V Y I +EL AY L ++ +I+ L++ID VD +T+ + LATQ Sbjct: 241 LLHLIDATSDDVIRDYNTIKEELQAYGQGLAERPQILALNKIDAVDRETVDLEA--LATQ 298 Query: 300 CGQVP----FEFSSITGHGIPQILE 320 + F S++T G+ +L+ Sbjct: 299 LNHLSYAPVFIISAVTRTGLEPMLQ 323 >gi|330941234|gb|EGH44099.1| GTPase CgtA [Pseudomonas syringae pv. pisi str. 1704B] Length = 407 Score = 271 bits (694), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 151/325 (46%), Positives = 219/325 (67%), Gaps = 8/325 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +++GDGG G +SFRREKFIE GGP+GG GG GG +++ A NLNTL+D+R Sbjct: 1 MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSIFMVADVNLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HF A+ G G + +G KGE++VL VPVGT + + +I DL ++GQR+++A G Sbjct: 61 YTRHFDAERGSNGGSADCTGRKGEELVLRVPVGTTIIDATTQEIIGDLTKDGQRLMVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G ++ + L+LK++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGDQRDLKLELKVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVDRWKSFVVADIPGLIEGASDGAGLGIRFLKHLARTRL 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V E + A + I++EL ++ L ++ + L++ D + + +K E+ Sbjct: 241 LLHLVDMAPLDESSAPDAAEVIVNELERFSPSLAERDRWLVLNKCDQILEEEQEARKQEI 300 Query: 297 ATQ---CGQVPFEFSSITGHGIPQI 318 + G V + S+I G Q+ Sbjct: 301 VDRLEWTGPV-YVISAIAKEGTEQL 324 >gi|323698877|ref|ZP_08110789.1| GTP-binding protein Obg/CgtA [Desulfovibrio sp. ND132] gi|323458809|gb|EGB14674.1| GTP-binding protein Obg/CgtA [Desulfovibrio desulfuricans ND132] Length = 343 Score = 271 bits (694), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 152/343 (44%), Positives = 233/343 (67%), Gaps = 12/343 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + SG GG G S RRE + GGPDGG GG+GGD+ ++ + L +L DFR Sbjct: 1 MKFVDEATIKVASGKGGNGCASLRREANMPKGGPDGGDGGKGGDLILRGSERLMSLYDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE----EDGIS---LICDLDQEGQ 113 ++H+ A++G+ GM R+R G +D+++ +PVGT V+E EDG + L+ DL ++G Sbjct: 61 LKRHYTAKNGQSGMGRDRYGKAADDLIVDLPVGTLVYEIIEEEDGTTREELVADLVEDGT 120 Query: 114 RIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKS 173 +I++ GG+GG GN HFKSS N+ P YA PG GQEK++ L+LK++AD+G++GLP+AGKS Sbjct: 121 QIVICKGGDGGRGNLHFKSSINRTPRYAEPGFPGQEKLLRLELKILADVGLLGLPSAGKS 180 Query: 174 TFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLK 232 TF++ V+ A+PKIA YPFTTL PNLG+++ + +K ++ADIPG+I+ A +G G+G FLK Sbjct: 181 TFISKVSAARPKIAAYPFTTLVPNLGVIENDDFKRMVIADIPGLIEGASEGRGLGITFLK 240 Query: 233 HTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 H ERT L+HI++A + N Y + EL YN+E+ K +I +++IDT+ D L Sbjct: 241 HVERTRFLVHILAAEDVNRDDPVDGYAMLNQELREYNAEMALKPQIKVINKIDTLSEDEL 300 Query: 290 ARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 A K ++A G+ + S++TG G+ ++L + ++ + E Sbjct: 301 ADMKAKVAA-SGETIYFISALTGEGVDELLAAMWRQLAQLDDE 342 >gi|225850046|ref|YP_002730280.1| GTPase ObgE [Persephonella marina EX-H1] gi|261277662|sp|C0QUB5|OBG_PERMH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|225645999|gb|ACO04185.1| Obg family GTPase CgtA [Persephonella marina EX-H1] Length = 340 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 155/326 (47%), Positives = 229/326 (70%), Gaps = 4/326 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+AK+++++GDGG G ++FRREK++ GGP GG+GG+GGDV I A +L TL+DFR Sbjct: 1 MRFIDKAKIHVKAGDGGNGCVAFRREKYVRMGGPSGGNGGKGGDVIIMADKSLKTLMDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++HFKA++G+ G NR G G+D+++ VPVGT V + + ++ DL +GQ++++A G Sbjct: 61 YKKHFKAENGQHGSGNNRHGRNGKDLIIKVPVGTVVKDAETGEILADLIYDGQKVVVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FK+STNQAP YA G G+E+ I L+LKLIADIGIIG PNAGKST ++ ++ Sbjct: 121 GRGGRGNAAFKTSTNQAPDYAEEGQPGEERWIELELKLIADIGIIGFPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +AKPKIADYPFTTL P LG+++ Y K ++ADIPG+I+ A +GAG+G FL+H ERT Sbjct: 181 KAKPKIADYPFTTLTPVLGVLQLDYGKSVVIADIPGLIEGASKGAGLGHEFLRHIERTKA 240 Query: 240 LLHIV---SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H++ E + A++ I EL Y+ EL KK +IV ++ID + +L K + Sbjct: 241 LIHMIDISDQRERDPIEAFEIINKELEKYSPELVKKPQIVVGNKIDMLSDRSLIEKLKKE 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECL 322 ++ G S +T G+ Q+++ + Sbjct: 301 FSKRGYPFVAVSLVTKEGLDQLIKLI 326 >gi|26987426|ref|NP_742851.1| GTPase ObgE [Pseudomonas putida KT2440] gi|148545968|ref|YP_001266070.1| GTPase ObgE [Pseudomonas putida F1] gi|81586451|sp|Q88Q08|OBG_PSEPK RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277685|sp|A5VYC6|OBG_PSEP1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|24982086|gb|AAN66315.1|AE016260_1 GTP-binding protein, GTP1/Obg family [Pseudomonas putida KT2440] gi|148510026|gb|ABQ76886.1| GTP-binding protein Obg/CgtA [Pseudomonas putida F1] gi|313497052|gb|ADR58418.1| ObgE [Pseudomonas putida BIRD-1] Length = 408 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 148/300 (49%), Positives = 212/300 (70%), Gaps = 4/300 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +++GDGG G +SFRREKFIE GGP+GG GG GG V++ A NLNTL+D+R Sbjct: 1 MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSVYMIADENLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +H +AQ G G + +G KGED+ L VPVGT V + +I DL GQ++++A G Sbjct: 61 YTRHHEAQRGSNGGSTDCTGKKGEDLFLRVPVGTTVIDASTQEVIGDLVTPGQKLMVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G+++ + +++K++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGEQRDLKMEMKVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A +GAG+G RFLKH RT V Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVDRWKSFVIADIPGLIEGASEGAGLGIRFLKHLARTRV 240 Query: 240 LLHIV--SALEENVQA-AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V + L+E+ A A + I++EL+ ++ L ++ + L++ D V D + E+ Sbjct: 241 LLHLVDIAPLDESSPADAAEVIVNELTRFSPSLAERERWLVLNKADMVMDDERDERVQEV 300 >gi|330815466|ref|YP_004359171.1| GTP1/OBG subdomain protein [Burkholderia gladioli BSR3] gi|327367859|gb|AEA59215.1| GTP1/OBG subdomain protein [Burkholderia gladioli BSR3] Length = 369 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 154/333 (46%), Positives = 226/333 (67%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +G+GG G S RREKF+ FGGPDGG GGRGG V+ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGNGGDGSASMRREKFVPFGGPDGGDGGRGGSVYAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + A++GE G + G G+D+ L +PVGT + + D LI DL + Q++++A G Sbjct: 61 FAKKHLARNGENGRGSDCYGKGGDDITLRMPVGTVITDMDTGELIADLTEHEQKVLVAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMVKLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT V Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPSKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGV 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E+V A I+ EL Y+ L +K + L+++D V D A + + Sbjct: 241 LLHLVDLAPFDESVDPVAEATAIVGELRKYDESLYEKPRWLVLNKLDMVPDDERAERVAD 300 Query: 296 LATQCGQ--VPFEFSSITGHGIPQILECLHDKI 326 + G FE S++TG G ++ ++D + Sbjct: 301 FIRRFGWDGPVFEISALTGQGCDNLVYAVYDYL 333 >gi|222054345|ref|YP_002536707.1| GTP-binding protein Obg/CgtA [Geobacter sp. FRC-32] gi|261266801|sp|B9M3W3|OBG_GEOSF RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|221563634|gb|ACM19606.1| GTP-binding protein Obg/CgtA [Geobacter sp. FRC-32] Length = 338 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 152/332 (45%), Positives = 230/332 (69%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K++++SGDGG G +SFR EKFIEFGGPDGG GG+GG+V ++A+ NL+TL+D R Sbjct: 1 MSFIDEVKIHVKSGDGGPGCVSFRHEKFIEFGGPDGGDGGKGGNVIVEASRNLSTLLDLR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 H KA G+ GM ++R GA G+D+ L +PVGT + + + ++ DL + GQ ++L G Sbjct: 61 QHPHQKAGSGKNGMGKDRHGAYGKDLRLLLPVGTVIKDAETDEVLADLTEPGQPLVLLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F ++T++AP +A PG G+E+ + L+LKL+AD+G++G+P+ GKS+ + V+ Sbjct: 121 GRGGQGNARFATATHKAPRFAQPGEPGEERWLRLELKLMADVGLLGMPSVGKSSLITKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+Y FTTL PNLG+V + YK F++ADIPG+I+ AH+GAG+G RFLKH ERT Sbjct: 181 AARPKIAEYHFTTLKPNLGVVAYKNYKSFVMADIPGLIEGAHEGAGLGHRFLKHLERTGH 240 Query: 240 LLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID-TVDSDTLARKKNE 295 LLHI+ + + Y+ I ELS +N EL +K + + ++++D V + LA+ Sbjct: 241 LLHILDISWMPDRDPIREYEAINKELSLFNPELAEKKQTIVINKMDLPVVKENLAKVLPY 300 Query: 296 LATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 + +V F S+ TG GIP +L+ + +++ Sbjct: 301 FQERGLKV-FPISAATGEGIPALLDEIARQLW 331 >gi|312962995|ref|ZP_07777481.1| GTP-binding protein, HSR1-like protein [Pseudomonas fluorescens WH6] gi|311282764|gb|EFQ61359.1| GTP-binding protein, HSR1-like protein [Pseudomonas fluorescens WH6] Length = 407 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 143/288 (49%), Positives = 206/288 (71%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +++GDGG G +SFRREKFIE GGP+GG GG GG +++ A NLNTL+D+R Sbjct: 1 MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSIYMMADENLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HF A+ G G + +G KGED+VL VPVGT + + +I DL + GQ++++ G Sbjct: 61 YTRHFDAERGSNGGSTDCTGKKGEDLVLRVPVGTTIIDSATQEVIGDLTKAGQKLMVVQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G+++ + L++K++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGEQRDLKLEMKVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVDRWKSFVIADIPGLIEGASDGAGLGIRFLKHLSRTRL 240 Query: 240 LLHIV--SALEENVQA-AYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH+V + L+E A A + I+ EL+ ++ L ++ + L++ D + Sbjct: 241 LLHLVDMAPLDETSAADAAEVIVSELTKFSPALAERDRWLVLNKCDQI 288 >gi|253995896|ref|YP_003047960.1| GTPase ObgE [Methylotenera mobilis JLW8] gi|253982575|gb|ACT47433.1| GTP-binding protein Obg/CgtA [Methylotenera mobilis JLW8] Length = 363 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 157/340 (46%), Positives = 226/340 (66%), Gaps = 7/340 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + I +GDGG G +FRREK+ GGP GG GGRGG + I+A N+NTL+D+R Sbjct: 1 MKFIDEATIKIFAGDGGNGVATFRREKYEPMGGPSGGDGGRGGSIIIEADRNINTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+AQ GE G GAKGED+VL VPVGT + ++ ++ DL + GQR +A G Sbjct: 61 YTRSFRAQRGENGRSAECYGAKGEDMVLRVPVGTVISDKSSEQMLVDLSEHGQRAQMAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG GN HFKSS N+AP G G+E ++L+LK++AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GNGGLGNVHFKSSMNRAPRQCTKGEPGEEFELYLELKVLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL+PNLG+V+ + + F++ADIPGII+ A +GAG+G +FL+H RT + Sbjct: 181 AAKPKVADYPFTTLHPNLGVVRVDAERSFVIADIPGIIEGAAEGAGLGHQFLRHLARTSL 240 Query: 240 LLHI--VSALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKN 294 LLH+ V+ +E V ++ I++EL Y+ L K + L++ID + +S + Sbjct: 241 LLHLVDVAPFDEAVDPVHEAKAIVEELKKYDEALYNKPRWLVLNKIDMLPESKQVIEDFV 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + G+V F S+I+G G ++ + I R + E Sbjct: 301 KAYGWEGRV-FAISAISGIGCKELTYAIMQHIEDNRQQEE 339 >gi|262368538|ref|ZP_06061867.1| obg family GTPase CgtA [Acinetobacter johnsonii SH046] gi|262316216|gb|EEY97254.1| obg family GTPase CgtA [Acinetobacter johnsonii SH046] Length = 404 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 154/332 (46%), Positives = 220/332 (66%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + + +GDGG G SFRREKF+ FGGPDGG GGRGG V+I+A N +TL+DFR Sbjct: 1 MRFVDEAVITVEAGDGGNGVASFRREKFVPFGGPDGGDGGRGGSVFIEADDNTSTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+A+ + G N +G GED VL VPVGT + + D +I DL + GQR+++A G Sbjct: 61 YTRRFRAERAKNGRGANCAGRGGEDTVLKVPVGTTIVDTDSGDIIGDLVESGQRVLVAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSSTN++P G G+ + I L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GDGGLGNTHFKSSTNRSPRKCTHGFKGEFREIRLELKVLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTT+ PNLG+V + ++ F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTMVPNLGVVDADSHRSFVMADIPGLIEGASEGAGLGIRFLKHLARTRI 240 Query: 240 LLHIVSALE-ENVQAAY--QCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHIV + AY + IL EL ++ L K ++ L+++D + DT + Sbjct: 241 LLHIVDVQPIDGSDPAYNAKAILGELEKFSPTLSKLPIVLVLNKVDQLADDTRDEWCQHI 300 Query: 297 --ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 Q F+ S + G ++ L D+I Sbjct: 301 LDEMQWDGPVFKTSGLMSEGTKPVVYYLMDQI 332 >gi|171463013|ref|YP_001797126.1| GTP-binding protein Obg/CgtA [Polynucleobacter necessarius subsp. necessarius STIR1] gi|261277668|sp|B1XT35|OBG_POLNS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|171192551|gb|ACB43512.1| GTP-binding protein Obg/CgtA [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 370 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 157/342 (45%), Positives = 229/342 (66%), Gaps = 9/342 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +G GGAG S RREKFIEFGGPDGG GG+GG VW A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGQGGAGSASMRREKFIEFGGPDGGDGGKGGSVWATADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+D+ L +PVGT + + + I DL G+R+ LA G Sbjct: 61 YAKTHTAKNGEPGRGADCYGRAGDDIELRMPVGTIISDYETGEPIADLTTHGERLCLAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HFKSSTN+AP G G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GVGGWGNIHFKSSTNRAPRQKTNGKSGERRKLKLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G + F++ADIPG+I+ A +GAG+G RFL+H +RT V Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVGSERSFVIADIPGLIEGAAEGAGLGHRFLRHLQRTGV 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + + NV A I++EL Y+ L +K + L+++D + + + ++ Sbjct: 241 LLHLVDIAPFDANVDPVADAAAIVNELRKYDEALVEKPRWLVLNKVDIIPEEGRKKVVSD 300 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + G V FE S++TG G ++ L D + SIR + + Sbjct: 301 FVKKFKWKGPV-FEISALTGMGCDKLCYSLQDYLDSIRRDRD 341 >gi|304316601|ref|YP_003851746.1| GTP-binding protein Obg/CgtA [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778103|gb|ADL68662.1| GTP-binding protein Obg/CgtA [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 423 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 153/322 (47%), Positives = 218/322 (67%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+YI+SG+GG G ISFRREK++ +GGPDGG GG+GGDV N++TL+DF+Y+ Sbjct: 2 FIDSAKIYIKSGNGGNGVISFRREKYVAYGGPDGGDGGKGGDVVFITDPNMSTLMDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A GE G N+ G +D+ + VPVGTQ+ +D LI DL + GQ+ I+ GG Sbjct: 62 RKYVAPSGENGSGNNKYGKDADDLYIKVPVGTQIIRDDTNELIADLTKPGQKAIVLRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F S+T + P +A G G+E I L+LKL+AD+G++G PNAGKST LA+ T A Sbjct: 122 GGRGNAKFASATLKTPRFAESGEEGKELYIRLELKLLADVGLVGFPNAGKSTLLAACTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIA+YPFTTLYPNLG+V K F++ADIPG+I+ AH+G G+G FLKH ERT ++LH Sbjct: 182 RPKIANYPFTTLYPNLGVVYHKGKSFVMADIPGLIEGAHRGEGLGYDFLKHIERTKLILH 241 Query: 243 IVSA---LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 I+ L + + ++ I +E+ YN +L++ +IV L++ID +D+ + Q Sbjct: 242 IIDVSNPLSDPID-DFKKINEEMYLYNDKLKEIPQIVALNKIDALDASLIDLDDISAKIQ 300 Query: 300 C-GQVPFEFSSITGHGIPQILE 320 G F+ S+ITG GI +L+ Sbjct: 301 SFGYDVFKISAITGIGIENLLD 322 >gi|78224388|ref|YP_386135.1| GTPase ObgE [Geobacter metallireducens GS-15] gi|123570874|sp|Q39QR4|OBG_GEOMG RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|78195643|gb|ABB33410.1| GTP-binding protein, GTP1/OBG family [Geobacter metallireducens GS-15] Length = 338 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 151/324 (46%), Positives = 219/324 (67%), Gaps = 4/324 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE K++++SG GGAG +SFRREKFI FGGPDGG GG+GGDV NL+TL+D R Sbjct: 1 MQFIDEVKIHVQSGHGGAGCVSFRREKFIPFGGPDGGDGGKGGDVIFTVDPNLSTLMDLR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+ H KA G+ GM ++R GA G+D+ + VP GT V + + ++ DL + GQ ++L G Sbjct: 61 YRPHLKAGRGKNGMGKDRHGANGDDLTIPVPPGTIVKDAETGEILADLTEPGQTVVLLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F +STN+AP +A PG +E+ + L+LKL+AD+G++G PN GKS+F+ V+ Sbjct: 121 GRGGQGNARFTTSTNRAPKFAQPGEDEEERWLRLELKLMADVGLLGFPNVGKSSFITKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTT+ PNLG+V + Y+ F++ADIPGII+ A +GAG+G RFLKH ERT++ Sbjct: 181 AARPKIADYPFTTIKPNLGVVSYKNYRSFVVADIPGIIEGASEGAGLGHRFLKHVERTNI 240 Query: 240 LLHIVSA---LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ + + Y+ + EL+ ++ EL K +I +++ID + Sbjct: 241 LLHLIDLSWIPDRDPIREYETLNRELALFSPELAGKEQIAVINKIDLPVVRENLPSVIDW 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILE 320 + G F S+ TG GIP +L+ Sbjct: 301 FKERGIAVFPISAATGEGIPTLLD 324 >gi|313673986|ref|YP_004052097.1| gtp-binding protein obg/cgta [Calditerrivibrio nitroreducens DSM 19672] gi|312940742|gb|ADR19934.1| GTP-binding protein Obg/CgtA [Calditerrivibrio nitroreducens DSM 19672] Length = 355 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 153/335 (45%), Positives = 232/335 (69%), Gaps = 5/335 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D K+ +++GDGG G +SFRREK++ GGPDGG GGRGG+V + + +TL+D Sbjct: 1 MKFIDTVKIIVKAGDGGNGCVSFRREKYVPKGGPDGGHGGRGGNVILVGDKSKHTLLDLN 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+ +KA+ G+ G +++G G+D+++ VP+GT V E + +I ++ ++GQR+I+A G Sbjct: 61 YKHIYKAERGQHGRGNDQNGKSGDDLLINVPLGTVVKEVETGDIIGEILEDGQRLIVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F S T +AP A PG G+EK + L+LKLIAD+GI+G PNAGKSTF++ V+ Sbjct: 121 GRGGRGNLAFVSPTQRAPRIAEPGEPGEEKTLMLELKLIADVGIVGFPNAGKSTFISVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+VK + + F+LAD+PG+I+ AH G G+G +FL+H ERT Sbjct: 181 AAKPKIADYPFTTLTPNLGVVKREFGRSFVLADMPGLIEGAHMGLGLGIQFLRHIERTKF 240 Query: 240 LLHIV-SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 +LH + S+ EE++ Y I +EL +Y+ EL K E+V ++ID+V+ D L +N + Sbjct: 241 ILHFIDSSSEESMVENYLKIRNELKSYSEELANKYEVVVATKIDSVNLDNLRDFENFIKD 300 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 + F+ S+IT G+ +++ + +K+ +I +N Sbjct: 301 KDF---FKISAITMEGVDDLIKFISEKLSAIDPQN 332 >gi|56475879|ref|YP_157468.1| GTPase ObgE [Aromatoleum aromaticum EbN1] gi|81599007|sp|Q5P7Z4|OBG_AZOSE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|56311922|emb|CAI06567.1| putative GTP-binding protein [Aromatoleum aromaticum EbN1] Length = 404 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 152/341 (44%), Positives = 226/341 (66%), Gaps = 7/341 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G SFRREKFI GGPDGG GGRGG ++ A NLNTL+D+R Sbjct: 1 MKFIDEARIEVMAGDGGNGSASFRREKFIPRGGPDGGDGGRGGSIYALADRNLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + +AQ GE G ++ G GED+VL +PVGT + + + L+ DLD++G++ I+A G Sbjct: 61 FTRMHRAQRGENGGNKDCYGKGGEDIVLRMPVGTVITDLETGELVADLDEDGKQAIVARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP G G+ + + L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GKGGLGNLHFKSSVNRAPRKRTMGEEGERRALRLELKVLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V+ + + F++ADIPG+I+ A +G G+G +FL+H +RT V Sbjct: 181 AAKPKVADYPFTTLAPNLGVVRTDQNRSFVIADIPGLIEGAAEGHGLGHQFLRHLQRTRV 240 Query: 240 LLHIVSALEENVQA----AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + A + I++EL Y+ L K + L+++D + D A + Sbjct: 241 LLHLVDLAPFDPDADPVRDAKAIVEELRKYDESLYNKPRWLALNKLDLIPEDERAARVAA 300 Query: 296 LATQCGQVP--FEFSSITGHGIPQILECLHDKIFSIRGENE 334 G V FE S++TG G +++ + D + + R + E Sbjct: 301 FLEAYGPVERHFEISALTGDGCRKLVFAIQDFLDAGRAQAE 341 >gi|305665163|ref|YP_003861450.1| putative Spo0B-related GTP-binding protein [Maribacter sp. HTCC2170] gi|88709915|gb|EAR02147.1| putative Spo0B-related GTP-binding protein [Maribacter sp. HTCC2170] Length = 333 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 151/328 (46%), Positives = 217/328 (66%), Gaps = 6/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K++ SG+GG G + REK+I GGPDGG GGRGG V ++ NL TL+ ++++ Sbjct: 6 FVDYVKIHASSGNGGKGSVHLHREKYITKGGPDGGDGGRGGHVIVRGNKNLWTLVSYKFK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA HG G K SGA GEDV + VP+GT + + ++ ++ + G+ IIL GG Sbjct: 66 RHFKAGHGGHGSKNRSSGADGEDVYMDVPLGTVFKDSETNEVLFEITEVGEEIILVEGGM 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+STNQ P YA PG+ G+E + L+LK++AD+G++G PNAGKST L+ +T A Sbjct: 126 GGRGNWHFKTSTNQTPRYAQPGVEGKEIDVVLELKVLADVGLVGFPNAGKSTLLSVITSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLGIV+ ++ F++ADIPGII+ A +G G+G FL+H ER LL Sbjct: 186 KPKIADYEFTTLKPNLGIVQHRDFQSFVMADIPGIIEGAAEGKGLGHYFLRHIERNASLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A ++ Y+ +LDEL YN EL K +V +S+ D +D + + + EL Sbjct: 246 FLIPADSNDISKEYEILLDELRRYNPELLDKERLVAISKSDMLDEELMDEMRIELDKDLK 305 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFS 328 VP+ F SS++ +GI + L DK+++ Sbjct: 306 DVPYMFISSVSQYGIQE----LKDKLWA 329 >gi|325277091|ref|ZP_08142745.1| GTPase CgtA [Pseudomonas sp. TJI-51] gi|324097773|gb|EGB95965.1| GTPase CgtA [Pseudomonas sp. TJI-51] Length = 408 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 147/291 (50%), Positives = 208/291 (71%), Gaps = 4/291 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +++GDGG G +SFRREKFIE GGP+GG GG GG V++ A NLNTL+D+R Sbjct: 1 MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSVYMVADENLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +H +AQ G G + +G KGED+ L VPVGT V + +I DL GQ++++A G Sbjct: 61 YTRHHEAQRGANGGSTDCTGKKGEDLFLRVPVGTTVIDASTQEVIGDLVTPGQKLMVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G+++ + +++K++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGEQRDLKMEMKVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A GAG+G RFLKH RT V Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVDRWKSFVIADIPGLIEGASDGAGLGIRFLKHLARTRV 240 Query: 240 LLHIV--SALEENVQA-AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + L+E+ A A + I++EL+ ++ L ++ + L++ D V D Sbjct: 241 LLHLVDIAPLDESSPADAAEVIVNELTRFSPSLAERERWLVLNKADMVMED 291 >gi|167031737|ref|YP_001666968.1| GTPase ObgE [Pseudomonas putida GB-1] gi|261277686|sp|B0KMF6|OBG_PSEPG RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|166858225|gb|ABY96632.1| GTP-binding protein Obg/CgtA [Pseudomonas putida GB-1] Length = 408 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 148/300 (49%), Positives = 211/300 (70%), Gaps = 4/300 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +++GDGG G +SFRREKFIE GGP+GG GG GG V++ A NLNTL+D+R Sbjct: 1 MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSVYMVADENLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +H +AQ G G + +G KGED+ L VPVGT V + +I DL GQ++++A G Sbjct: 61 YTRHHEAQRGSNGGSTDCTGKKGEDLFLRVPVGTTVIDASTQEVIGDLVTPGQKLMVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G ++ + +++K++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGDQRDLKMEMKVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A +GAG+G RFLKH RT V Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVDRWKSFVIADIPGLIEGASEGAGLGIRFLKHLARTRV 240 Query: 240 LLHIV--SALEENVQA-AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V + L+E+ A A + I++EL+ ++ L ++ + L++ D V D + E+ Sbjct: 241 LLHLVDIAPLDESSPADAAEVIVNELTRFSPSLAERERWLVLNKSDMVMDDERDERVQEV 300 >gi|312793300|ref|YP_004026223.1| gtp-binding protein obg/cgta [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180440|gb|ADQ40610.1| GTP-binding protein Obg/CgtA [Caldicellulosiruptor kristjanssonii 177R1B] Length = 427 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 157/328 (47%), Positives = 222/328 (67%), Gaps = 8/328 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+Y+++GDGG G ++FRREK++ GGP GG GG+GGDV A LNTL+DF+Y+ Sbjct: 2 FVDIAKIYVKAGDGGDGIVAFRREKYVPAGGPAGGDGGKGGDVIFVADRELNTLLDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KAQ+GE+G N G GED+++ VPVGT + + + +I DL +EG R I+A GG Sbjct: 62 RHYKAQNGERGGPNNMHGKDGEDLIIKVPVGTVIKDAETGEIIADLSREGDRAIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHF +ST Q P +A G G E + L+LK++AD+G+IG PN GKSTFL+ T A Sbjct: 122 GGRGNAHFATSTRQVPRFAEVGEKGDELWVILELKVLADVGLIGYPNVGKSTFLSVATNA 181 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KP+IA+YPFTT YPNLGIV EG + F+LADIPG+I+ A +GAG+G +FL+H ERT VL Sbjct: 182 KPEIANYPFTTKYPNLGIVYISEG-ESFVLADIPGLIEGASEGAGLGHQFLRHVERTKVL 240 Query: 241 LHIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 +HIV S E V+ + I +EL Y+ EL +K +IV +++D D+ E Sbjct: 241 IHIVDVSGSEGREPVE-DFIKINEELKKYSPELAQKPQIVAANKMDLPDAQAYFELFKEE 299 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHD 324 + G + S+ TG G+ ++L+ ++ Sbjct: 300 IEKMGYEVYPVSAATGMGVREVLKRAYE 327 >gi|78065144|ref|YP_367913.1| GTPase ObgE [Burkholderia sp. 383] gi|123569379|sp|Q39JU7|OBG_BURS3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|77965889|gb|ABB07269.1| GTP-binding protein [Burkholderia sp. 383] Length = 370 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 159/333 (47%), Positives = 226/333 (67%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V+ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVYAIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+DV L +PVGT + + D LI DL + Q+++LA G Sbjct: 61 YAKKHLARNGENGRGSDCYGKGGDDVTLRMPVGTIISDMDTGELIADLTEHDQQVMLAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GSGGLGNLHFKSSTNRAPRQKTDGKPGERRMLRLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT V Sbjct: 181 NARPKIADYPFTTLAPNLGVVRVGPSKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGV 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL-ARKKN 294 LLH+V + +E+V A I+ EL Y+ L +K + L+++D V D AR + Sbjct: 241 LLHLVDLAPFDESVDPVAEATAIVGELRKYDEALYEKPRWLVLNKLDMVPEDERKARVAD 300 Query: 295 ELATQCGQVP-FEFSSITGHGIPQILECLHDKI 326 L P FE S++TG G + ++D + Sbjct: 301 FLERFEWDGPVFEISALTGQGCEALCYAIYDYL 333 >gi|186477398|ref|YP_001858868.1| GTPase ObgE [Burkholderia phymatum STM815] gi|261266705|sp|B2JHD7|OBG_BURP8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|184193857|gb|ACC71822.1| GTP-binding protein Obg/CgtA [Burkholderia phymatum STM815] Length = 370 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 158/333 (47%), Positives = 224/333 (67%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V+ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVYAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A++GE G + G G+D+ L +PVGT + + D LI DL + Q + +A G Sbjct: 61 YSKKHQARNGENGRGSDCYGKGGDDITLRMPVGTIITDMDTGELIADLTEHNQTVRIAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMVRLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G + F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPSRSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL-ARKKN 294 LLHIV + +E V A + I++EL Y+ EL K + L+++D V D AR Sbjct: 241 LLHIVDLAPFDETVDPVAEAKAIVNELRKYDEELFSKPRWLVLNKLDMVPEDEREARVAA 300 Query: 295 ELATQCGQVP-FEFSSITGHGIPQILECLHDKI 326 L P FE S++TG G + ++D + Sbjct: 301 FLKDFEWDGPVFEISALTGQGCENLCYAVYDYL 333 >gi|224823692|ref|ZP_03696801.1| GTP-binding protein Obg/CgtA [Lutiella nitroferrum 2002] gi|224604147|gb|EEG10321.1| GTP-binding protein Obg/CgtA [Lutiella nitroferrum 2002] Length = 388 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 154/351 (43%), Positives = 227/351 (64%), Gaps = 21/351 (5%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +G GG G SFRREKF+ FGGPDGG GG+GG V+ A N+NTL+++R Sbjct: 1 MKFIDEARIEVIAGKGGNGAASFRREKFVPFGGPDGGDGGKGGSVYAVADENVNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + + AQHGEKG + G G+D+ L +PVGT + + D ++ DL + G+R++LA G Sbjct: 61 FVKKYLAQHGEKGHGADCYGKGGDDIELKMPVGTVIIDSDTDEVVADLARHGERVMLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP PG G+ + + L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GKGGLGNIHFKSSTNRAPRQCTPGEEGERRSLRLELKVLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL+PNLG+V+ + + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLHPNLGVVRMKDTRSFVIADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + + V + I++EL Y+ EL K + L+++D + D + Sbjct: 241 LLHVVDIAPFDPEVDPVREAHAIVEELKKYDEELYNKPRWLVLNKVDMLPEDEREERIAA 300 Query: 296 LATQCG---QVP---FEF----------SSITGHGIPQILECLHDKIFSIR 330 G Q P FEF S++TG G + + + I +R Sbjct: 301 FLEAFGWPKQQPNDEFEFDMGAPRVFTVSALTGEGTQAVTYAMMEYIERVR 351 >gi|21675022|ref|NP_663087.1| GTPase ObgE [Chlorobium tepidum TLS] gi|81790478|sp|Q8KAF0|OBG_CHLTE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|21648257|gb|AAM73429.1| GTP-binding protein Obg [Chlorobium tepidum TLS] Length = 335 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 149/328 (45%), Positives = 220/328 (67%), Gaps = 10/328 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D AK+ +++GDGG G +SFRREKF+ GGPDGG GGRGG V+++A L TL+DF+ Sbjct: 1 MKFVDSAKISVKAGDGGRGCVSFRREKFVPKGGPDGGDGGRGGHVYLRANKQLTTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ + A G G+ +SG G+DV++ VP GT V + +ICD+ ++GQ I++A G Sbjct: 61 YRKSYIAGRGGHGLGARKSGKDGKDVIIGVPCGTVVRNVETGEVICDMVEDGQEIMIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HF ++T QAP +A PG G+E + ++LKL+AD+G++G PNAGKST ++ ++ Sbjct: 121 GRGGWGNQHFATATRQAPRFAQPGEPGEEYELEMELKLMADVGLVGFPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLGIV+ E YK F++ADIPGII+ A +G G+G +FL+H ERT Sbjct: 181 AARPKIADYPFTTLVPNLGIVRYEDYKSFVMADIPGIIEGAAEGRGLGIQFLRHIERTKT 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LL +V + E++ A Y +L EL ++ L K +V ++++D D + + Sbjct: 241 LLIMVPSNTEDIAAEYATLLKELEKFDPSLLSKPRLVVITKMDIAPEDFTMPE-----LE 295 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIF 327 G SS+ G G L+ L D+++ Sbjct: 296 KGVKVLAISSVAGQG----LKALKDELW 319 >gi|218249097|ref|YP_002374468.1| GTPase ObgE [Cyanothece sp. PCC 8801] gi|257062183|ref|YP_003140071.1| GTPase ObgE [Cyanothece sp. PCC 8802] gi|261266814|sp|B7JVH9|OBG_CYAP8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|218169575|gb|ACK68312.1| GTP-binding protein Obg/CgtA [Cyanothece sp. PCC 8801] gi|256592349|gb|ACV03236.1| GTP-binding protein Obg/CgtA [Cyanothece sp. PCC 8802] Length = 329 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 147/323 (45%), Positives = 212/323 (65%), Gaps = 1/323 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D A++ + G GG G ++FRREK++ GGP GG+GG GG V A SNL TL+DFR Sbjct: 1 MQFIDYAEIEVEGGKGGDGIVAFRREKYVPAGGPAGGNGGWGGSVIFVANSNLQTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + FKA G++G N +GA G+D ++ VP GT V+ + ++ DL + GQ + +A G Sbjct: 61 YARRFKADDGKRGGPNNCTGANGKDCLVEVPCGTMVYNLETEEILGDLVENGQTLCVAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP YA PG+ G+ + + L+LKL+A++GIIGLPNAGKST +AS++ Sbjct: 121 GKGGLGNKHFLSNQNRAPDYALPGLEGEHRWLRLELKLLAEVGIIGLPNAGKSTLMASLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V++ + + ADIPG+I+ AH+G G+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRKPTGDGTVFADIPGLIEGAHEGIGLGHEFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH+V + YQ I EL AY L + +I+ L+++D D +T KNEL Sbjct: 241 LLHLVDITSPDPVKDYQIIQQELEAYGRGLSDRPQIIALNKMDAADEETFLLIKNELTHL 300 Query: 300 CGQVPFEFSSITGHGIPQILECL 322 S ++ G+ +L+ + Sbjct: 301 SSSPIIGISGVSRTGLEDLLQIV 323 >gi|312877185|ref|ZP_07737154.1| GTP-binding protein Obg/CgtA [Caldicellulosiruptor lactoaceticus 6A] gi|311795994|gb|EFR12354.1| GTP-binding protein Obg/CgtA [Caldicellulosiruptor lactoaceticus 6A] Length = 427 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 156/328 (47%), Positives = 222/328 (67%), Gaps = 8/328 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+Y+++GDGG G ++FRREK++ GGP GG GG+GGDV A LNTL+DF+Y+ Sbjct: 2 FVDIAKIYVKAGDGGDGIVAFRREKYVPAGGPAGGDGGKGGDVIFVADRELNTLLDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KAQ+GE+G N G GED+++ VPVGT + + + +I DL +EG R I+A GG Sbjct: 62 RHYKAQNGERGGPNNMHGKDGEDLIIKVPVGTVIKDAETGEIIADLSREGDRAIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHF +ST Q P +A G G E + L+LK++AD+G+IG PN GKSTFL+ T A Sbjct: 122 GGRGNAHFATSTRQVPRFAEVGEKGDELWVILELKVLADVGLIGYPNVGKSTFLSVATNA 181 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +P+IA+YPFTT YPNLGIV EG + F+LADIPG+I+ A +GAG+G +FL+H ERT VL Sbjct: 182 RPEIANYPFTTKYPNLGIVYISEG-ESFVLADIPGLIEGASEGAGLGHQFLRHVERTKVL 240 Query: 241 LHIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 +HIV S E V+ + I +EL Y+ EL +K +IV +++D D+ E Sbjct: 241 IHIVDVSGSEGREPVE-DFIKINEELKKYSPELAQKPQIVAANKMDLPDAQAYFELFKEE 299 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHD 324 + G + S+ TG G+ ++L+ ++ Sbjct: 300 IEKMGYKVYPVSAATGMGVREVLKRAYE 327 >gi|302872052|ref|YP_003840688.1| GTP-binding protein Obg/CgtA [Caldicellulosiruptor obsidiansis OB47] gi|302574911|gb|ADL42702.1| GTP-binding protein Obg/CgtA [Caldicellulosiruptor obsidiansis OB47] Length = 427 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 156/328 (47%), Positives = 222/328 (67%), Gaps = 8/328 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+Y+++GDGG G ++FRREK++ GGP GG GG+GGDV A LNTL+DF+Y+ Sbjct: 2 FVDIAKIYVKAGDGGDGIVAFRREKYVPAGGPAGGDGGKGGDVIFVADRELNTLLDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KAQ+GE+G N G GED+++ VPVGT + + + +I DL +EG R I+A GG Sbjct: 62 RHYKAQNGERGGPNNMHGKDGEDLIIKVPVGTVIKDAETGEIIADLSREGDRAIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHF +ST Q P +A G G E + L+LK++AD+G+IG PN GKSTFL+ T A Sbjct: 122 GGRGNAHFATSTRQVPRFAEVGEKGDELWVILELKVLADVGLIGYPNVGKSTFLSVATNA 181 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +P+IA+YPFTT YPNLGIV EG + F+LADIPG+I+ A +GAG+G +FL+H ERT VL Sbjct: 182 RPEIANYPFTTKYPNLGIVYISEG-ESFVLADIPGLIEGASEGAGLGHQFLRHVERTKVL 240 Query: 241 LHIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 +HIV S E V+ + I +EL Y+ EL +K +IV +++D D+ E Sbjct: 241 IHIVDVSGSEGREPVE-DFITINEELKKYSPELAQKPQIVAANKMDLPDAQAYFELFKEE 299 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHD 324 + G + S+ TG G+ ++L+ ++ Sbjct: 300 IEKMGYEVYPVSAATGIGVREVLKRAYE 327 >gi|169795116|ref|YP_001712909.1| GTPase ObgE [Acinetobacter baumannii AYE] gi|184159096|ref|YP_001847435.1| GTPase ObgE [Acinetobacter baumannii ACICU] gi|213158222|ref|YP_002320273.1| GTP-binding protein Obg/CgtA [Acinetobacter baumannii AB0057] gi|215482664|ref|YP_002324860.1| GTP-binding protein Obg/CgtA [Acinetobacter baumannii AB307-0294] gi|239501086|ref|ZP_04660396.1| GTPase ObgE [Acinetobacter baumannii AB900] gi|260556604|ref|ZP_05828822.1| obg family GTPase CgtA [Acinetobacter baumannii ATCC 19606] gi|301345206|ref|ZP_07225947.1| GTPase ObgE [Acinetobacter baumannii AB056] gi|301510956|ref|ZP_07236193.1| GTPase ObgE [Acinetobacter baumannii AB058] gi|332854004|ref|ZP_08435120.1| Obg family GTPase CgtA [Acinetobacter baumannii 6013150] gi|332869716|ref|ZP_08438904.1| Obg family GTPase CgtA [Acinetobacter baumannii 6013113] gi|332875925|ref|ZP_08443711.1| Obg family GTPase CgtA [Acinetobacter baumannii 6014059] gi|261266626|sp|B7GYV1|OBG_ACIB3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266627|sp|B7I557|OBG_ACIB5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266628|sp|B2HWM9|OBG_ACIBC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266638|sp|B0VCR5|OBG_ACIBY RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266653|sp|A3M7M2|OBG_ACIBT RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|169148043|emb|CAM85906.1| putative GTP-binding protein (Obg) [Acinetobacter baumannii AYE] gi|183210690|gb|ACC58088.1| predicted GTPase [Acinetobacter baumannii ACICU] gi|193077996|gb|ABO12916.2| putative GTP-binding protein (Obg) [Acinetobacter baumannii ATCC 17978] gi|213057382|gb|ACJ42284.1| GTP-binding protein Obg/CgtA [Acinetobacter baumannii AB0057] gi|213987680|gb|ACJ57979.1| GTP-binding protein Obg/CgtA [Acinetobacter baumannii AB307-0294] gi|260409863|gb|EEX03163.1| obg family GTPase CgtA [Acinetobacter baumannii ATCC 19606] gi|322509008|gb|ADX04462.1| Putative GTP-binding protein [Acinetobacter baumannii 1656-2] gi|323518992|gb|ADX93373.1| GTPase ObgE [Acinetobacter baumannii TCDC-AB0715] gi|332728286|gb|EGJ59668.1| Obg family GTPase CgtA [Acinetobacter baumannii 6013150] gi|332732618|gb|EGJ63851.1| Obg family GTPase CgtA [Acinetobacter baumannii 6013113] gi|332735791|gb|EGJ66832.1| Obg family GTPase CgtA [Acinetobacter baumannii 6014059] Length = 406 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 150/333 (45%), Positives = 225/333 (67%), Gaps = 8/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + + +GDGG G SFRREKF+ FGGPDGG GGRGG ++IQA + +TL+D+R Sbjct: 1 MRFVDEAVITVEAGDGGNGVASFRREKFVPFGGPDGGDGGRGGSIYIQADDDTSTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+A+ G+ G N +G GEDVVL VPVGT + + D +I DL ++GQR+++A G Sbjct: 61 YTRKFRAERGKNGAGANCTGRGGEDVVLKVPVGTTIVDTDSGDIIGDLVEDGQRVMVASG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ + I L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GEGGLGNTHFKSSTNRAPRKCTTGTKGEFREIRLELKVLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTT+ PNLG+V + ++ F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTMVPNLGVVDADRHRSFVMADIPGLIEGAAEGAGLGIRFLKHLARTRI 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHI+ + + I++EL+ ++ L K ++ L+++D + ++ + Sbjct: 241 LLHIIDVQPIDGSDPAHNAKAIMNELAKFSPTLAKLPIVLVLNKLDQIAEESREEWCQHI 300 Query: 297 ATQ---CGQVPFEFSSITGHGIPQILECLHDKI 326 + G V F+ S + G +++ L D+I Sbjct: 301 LDELQWTGPV-FKTSGLLEEGTKEVVYYLMDQI 332 >gi|217970048|ref|YP_002355282.1| GTPase ObgE [Thauera sp. MZ1T] gi|217507375|gb|ACK54386.1| GTP-binding protein Obg/CgtA [Thauera sp. MZ1T] Length = 397 Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 150/338 (44%), Positives = 221/338 (65%), Gaps = 7/338 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF DEA++ + +GDGG G +FRREK+I GGP GG GGRGG V+ A NLNTLID+R Sbjct: 1 MKFFDEARIEVYAGDGGNGAATFRREKYIPKGGPSGGDGGRGGSVYAVADRNLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+A+ GE G R+ G G+D+ L PVGT + + + L+ DLD++G+ +++A G Sbjct: 61 YTRSFRAERGENGGSRDCYGKGGDDITLRFPVGTVIKDLESGELVADLDEDGKTVLIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ + + L+LK++AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GRGGLGNIHFKSSTNRAPRKKTMGQEGEYRNLHLELKVLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V+ + F++ADIPG+I+ A +GAG+G +FL+H +RTH+ Sbjct: 181 AAKPKVADYPFTTLAPNLGVVRTSEARSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTHL 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V E + A + I +EL Y+ L K + L+++D + + A + Sbjct: 241 LLHLVDLAPFDPEADPVADAKAIAEELRKYDEALYNKPRWLVLNKLDLIPEEERAERVAA 300 Query: 296 LATQCGQVP--FEFSSITGHGIPQILECLHDKIFSIRG 331 G V F+ S++ G G ++ + D + + R Sbjct: 301 FLEAYGPVERHFQISAMKGEGTQALIFAIQDLLDAERA 338 >gi|34496305|ref|NP_900520.1| GTPase ObgE [Chromobacterium violaceum ATCC 12472] gi|81656705|sp|Q7NZS1|OBG_CHRVO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|34102158|gb|AAQ58525.1| probable GTP-binding protein [Chromobacterium violaceum ATCC 12472] Length = 386 Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 141/292 (48%), Positives = 210/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +G GG G SFRREKF+ FGGPDGG GG+GG V+ A N+NTL+++R Sbjct: 1 MKFIDEARIEVMAGRGGNGVASFRREKFVPFGGPDGGDGGKGGSVYAVADENVNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + + AQHGE+G + G G+D+ L +PVGT + + D L+ DL GQR+++A G Sbjct: 61 FVKKYLAQHGERGRGADCYGKGGDDIELKMPVGTVIHDADTGELVADLTHHGQRVMIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP PG G+++ + L+LK++AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GKGGLGNIHFKSSTNRAPRQCTPGEQGEQRTLKLELKVLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL+PNLG+V+ + + F++ADIPG+I+ A +GAG+G RFLKH +RT + Sbjct: 181 AARPKVADYPFTTLHPNLGVVRMDDTRSFVIADIPGLIEGAAEGAGLGHRFLKHLQRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + + +V + I++EL ++ EL K + L+++D + D Sbjct: 241 LLHVVDIAPFDPDVDPVREARAIVEELKKFDEELHGKPRWLVLNKVDMLPED 292 >gi|261266754|sp|A4XJS8|OBG_CALS8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 427 Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 156/328 (47%), Positives = 222/328 (67%), Gaps = 8/328 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+Y+++GDGG G ++FRREK++ GGP GG GG+GGDV A LNTL+DF+Y+ Sbjct: 2 FVDIAKIYVKAGDGGDGIVAFRREKYVPAGGPAGGDGGKGGDVIFVADRELNTLLDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KAQ+GE+G N G GED+++ VPVGT + + + +I DL +EG R I+A GG Sbjct: 62 RHYKAQNGERGGPNNMHGKDGEDLIIKVPVGTVIKDAETGEIIADLSREGDRAIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHF ++T Q P +A G G E + L+LK++AD+G+IG PN GKSTFL+ T A Sbjct: 122 GGRGNAHFATATRQVPRFAEVGEKGDELWVILELKVLADVGLIGYPNVGKSTFLSVATNA 181 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +P+IA+YPFTT YPNLGIV EG + F+LADIPG+I+ A +GAG+G +FL+H ERT VL Sbjct: 182 RPEIANYPFTTKYPNLGIVYISEG-ESFVLADIPGLIEGASEGAGLGHQFLRHVERTKVL 240 Query: 241 LHIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 +HIV S E V+ + I +EL Y+ EL +K +IV +++D D+ E Sbjct: 241 IHIVDVSGSEGREPVE-DFIKINEELKKYSPELAQKPQIVAANKMDLPDAQAYFELFKEE 299 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHD 324 + G + S+ TG GI ++L+ ++ Sbjct: 300 IEKMGYEVYPISAATGMGIREVLKRAYE 327 >gi|332703119|ref|ZP_08423207.1| GTPase obg [Desulfovibrio africanus str. Walvis Bay] gi|332553268|gb|EGJ50312.1| GTPase obg [Desulfovibrio africanus str. Walvis Bay] Length = 414 Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 152/329 (46%), Positives = 227/329 (68%), Gaps = 10/329 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA++ +++GDGG G +SFRREK++ GGPDGG GG GGDV +A L TL DFR Sbjct: 1 MRFIDEARISVKAGDGGRGCVSFRREKYVPRGGPDGGDGGSGGDVIFRAEPRLLTLYDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE--EDGIS-LICDLDQEGQRIIL 117 ++ ++A+ G+ GM R G +D+ + VPVGT +FE +DG L+ DL + GQ ++ Sbjct: 61 LKRMYEAKRGQHGMGSQRYGKAADDLYVDVPVGTLLFELQKDGSERLLADLSEPGQEHVV 120 Query: 118 APGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 A GG GG GN HFKSST +AP +A PG G+E+ + ++LK++AD+G++GLPNAGKSTF+A Sbjct: 121 AKGGRGGKGNLHFKSSTMRAPRFAQPGEEGEERTLRMELKILADVGLLGLPNAGKSTFIA 180 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTER 236 +V+ A+PKIA YPFTTL PNLG++++ ++ ++ADIPG+I+ A +G G+G RFLKH ER Sbjct: 181 AVSAARPKIAPYPFTTLSPNLGVIEDDKGRQLVIADIPGLIEGASEGQGLGHRFLKHVER 240 Query: 237 THVLLHIVSALE-----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 T L+HI+S E EN ++ + +EL+AY+ EL +K ++ L++ID + L Sbjct: 241 TRFLVHILSVEEVHLEDENPLVGFELLDEELAAYDPELGRKPQVRVLNKIDLWSEEQLLA 300 Query: 292 KKNELATQCGQVPFEFSSITGHGIPQILE 320 K + QV F S++ G G+ ++L+ Sbjct: 301 LKQATKARGEQV-FLVSALRGDGLEELLD 328 >gi|258406300|ref|YP_003199042.1| GTPase ObgE [Desulfohalobium retbaense DSM 5692] gi|257798527|gb|ACV69464.1| GTP-binding protein Obg/CgtA [Desulfohalobium retbaense DSM 5692] Length = 350 Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 153/331 (46%), Positives = 226/331 (68%), Gaps = 8/331 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A+V +RSG+GG G +SFRREK++ GGPDGG GGRGG V ++A+ TL D R Sbjct: 1 MRFIDQAEVTVRSGNGGNGCVSFRREKYVPKGGPDGGDGGRGGSVRVRASGKRLTLYDVR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVF--EEDG-ISLICDLDQEGQRIIL 117 Q+ + A++G+ GM + + G GED V+ VPVGT VF DG L+ DL Q Q +++ Sbjct: 61 LQRRYLAENGKPGMGKGKHGRAGEDAVIDVPVGTLVFALNADGERQLVADLRQPDQEVVV 120 Query: 118 APGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 A GG GG GN HFKSSTN+ P +A PG G+E L+LK++AD+G+IGLPNAGKST ++ Sbjct: 121 AQGGRGGKGNTHFKSSTNRTPRFAQPGEEGEETKFVLELKILADVGLIGLPNAGKSTLIS 180 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTER 236 +V+ A+PK+A YPFTTL P LG+V++ Y ++ + ADIPG+I+ AH G G+G RFL+H ER Sbjct: 181 AVSAAQPKVASYPFTTLTPQLGVVEDDYGQQLVWADIPGLIEGAHAGQGLGHRFLRHVER 240 Query: 237 THVLLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 TH+L+H+ SA E E+ ++ + +EL+ ++ L K + +++ID +D LA + Sbjct: 241 THLLIHVCSAEEISLEHPWEGFELVNEELAQFDPALLDKPQFWVVNKIDLWSADQLATFQ 300 Query: 294 NELATQCGQVPFEFSSITGHGIPQILECLHD 324 N LA Q G+ + S++ I ++LE + + Sbjct: 301 N-LAAQAGRQVYCLSALHQDHIEELLEAVWE 330 >gi|94501362|ref|ZP_01307882.1| GTP-binding protein, GTP1/Obg family protein [Oceanobacter sp. RED65] gi|94426475|gb|EAT11463.1| GTP-binding protein, GTP1/Obg family protein [Oceanobacter sp. RED65] Length = 399 Score = 268 bits (686), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 152/329 (46%), Positives = 220/329 (66%), Gaps = 14/329 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G +SFRREK++ GGPDGG GG GG V + A +NTL+D+R Sbjct: 1 MKFVDEASIVVEAGKGGNGCMSFRREKYVPKGGPDGGDGGHGGSVILVADDAVNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +KA+ G+ GM R SG KGED L VPVGT V +ED + + DL ++GQ + +A G Sbjct: 61 YVRRYKAETGQDGMGREMSGKKGEDTYLRVPVGTTVIDEDTMETLGDLTEQGQELKVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN HFKSS N+AP G +G+ + + L++K+IAD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GTRGLGNIHFKSSVNRAPRQTTKGTMGESRNLKLEMKVIADVGLLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V +K F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVAKHKSFVVADIPGLIEGASEGAGLGIRFLKHLVRTRI 240 Query: 240 LLHIV-------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 LLHIV S +N +A I++EL ++ EL ++ + L+++D V + + Sbjct: 241 LLHIVDMNPYDGSTPADNAKA----IINELDKFSPELAERERWLVLNKLDLVPEEEREER 296 Query: 293 KNELATQCG-QVP-FEFSSITGHGIPQIL 319 + + G Q P ++ ++I+ G QI+ Sbjct: 297 CQAVIDELGWQGPVYKIAAISKQGTQQIV 325 >gi|145588384|ref|YP_001154981.1| GTPase ObgE [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|261277669|sp|A4SVA3|OBG_POLSQ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|145046790|gb|ABP33417.1| small GTP-binding protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 362 Score = 268 bits (686), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 155/342 (45%), Positives = 229/342 (66%), Gaps = 9/342 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +G GG+G S RREKFIEFGGPDGG GG+GG VW A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGQGGSGSASMRREKFIEFGGPDGGDGGKGGSVWATADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+D+ L +PVGT + + + I DL G+R+ LA G Sbjct: 61 YAKTHTAKNGEPGRGADCYGRAGDDIELRMPVGTIISDYETGEPIADLTTHGERLCLAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HFKSSTN+AP G G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GVGGWGNIHFKSSTNRAPRQKTNGKEGERRKLKLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G + F++ADIPG+I+ A +GAG+G RFL+H +RT V Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVGNERSFVIADIPGLIEGAAEGAGLGHRFLRHLQRTGV 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +EN+ A I++EL Y+ L +K + L+++D + + + + Sbjct: 241 LLHLVDIAPFDENIDPVADAVAIVNELRKYDEALVEKPRWLVLNKVDMIPEEDRKKVVAD 300 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + G V FE S++TG G ++ L D + S+R + + Sbjct: 301 FIKRFKWKGPV-FEISALTGLGCDKLCYALQDYLDSVRRDRD 341 >gi|254495958|ref|ZP_05108866.1| GTPase ObgE [Legionella drancourtii LLAP12] gi|254354836|gb|EET13463.1| GTPase ObgE [Legionella drancourtii LLAP12] Length = 341 Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 152/334 (45%), Positives = 225/334 (67%), Gaps = 9/334 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + I +G+GG G +SFRREKFI GGPDGG GG GG ++ +A++NLNTLIDFR Sbjct: 1 MRFVDEAIIKIDAGNGGNGCVSFRREKFIPRGGPDGGDGGDGGSIYFEASNNLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +H+KA +G++GM N SG KG+D+++ VPVGT +++ D L+ D+ Q G +++A G Sbjct: 61 YMRHYKAGNGQQGMGSNCSGKKGDDLIIKVPVGTLIYDVDSGELLGDISQVGVPVLIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN +KSS N++P ++PG G+ + + L+L+++AD+G++GLPNAGKST + +V+ Sbjct: 121 GFHGLGNTRYKSSVNRSPRQSSPGSAGESRHLRLELRVLADVGLLGLPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +K K+ADYPFTTL+P LG+V +K F++ADIPG+I+ A GAG+G RFLKH RT V Sbjct: 181 SSKAKVADYPFTTLHPGLGVVSVSSHKSFVMADIPGLIEGASAGAGLGHRFLKHLSRTCV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ + + + IL+EL+ YN EL +K + L++ID + D R+ Sbjct: 241 LLHVIDVAPLDGSDPVVSAKAILNELNEYNPELLQKPRWLVLNKIDML-PDEAEREARIQ 299 Query: 297 ATQCG----QVPFEFSSITGHGIPQILECLHDKI 326 A G + F S+I+G G Q+ L I Sbjct: 300 AIVDGLEWKEKVFPISAISGQGTQQLCYSLMQLI 333 >gi|194334875|ref|YP_002016735.1| GTPase ObgE [Prosthecochloris aestuarii DSM 271] gi|261277671|sp|B4S5P1|OBG_PROA2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|194312693|gb|ACF47088.1| GTP-binding protein Obg/CgtA [Prosthecochloris aestuarii DSM 271] Length = 327 Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 152/327 (46%), Positives = 221/327 (67%), Gaps = 6/327 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D A++ +++GDGG G +SFRREK++ GGPDGG GGRGG V+++A S L TL+DFR Sbjct: 1 MKFVDSARIVVKAGDGGNGCVSFRREKYVPKGGPDGGDGGRGGHVYLRANSQLATLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+++++A G G ++G G+D+V+ VP GT V +ICDL ++G+ +LA G Sbjct: 61 YKKNYEALRGVHGQGSKKAGKTGKDIVINVPCGTLVKNSVSGEVICDLVEDGEEFLLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HF +ST QAP YA PG G+E + L+LKL+AD+G++G PNAGKST ++ ++ Sbjct: 121 GDGGRGNPHFTTSTRQAPRYAEPGGKGEELKVDLELKLMADVGLVGFPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLGIV+ G YK F++ADIPGII+ A +G G+G +FL+H ERT V Sbjct: 181 AARPKIADYPFTTLVPNLGIVQYGEYKSFVMADIPGIIEGAAEGKGLGIQFLRHIERTKV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L +VS E+ Y+ +L E+ ++ L +K I+ ++++D VD A + Sbjct: 241 LAVLVSGDGEDPVGEYRLLLGEMERFDPALLQKPRIIVVTKMDVVDE---AFSLPDFEDD 297 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKI 326 +P SSIT G+ ++ L + I Sbjct: 298 VPLIP--VSSITRSGLEELRNALWNTI 322 >gi|146296583|ref|YP_001180354.1| GTPase ObgE [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410159|gb|ABP67163.1| small GTP-binding protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 440 Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 156/328 (47%), Positives = 222/328 (67%), Gaps = 8/328 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+Y+++GDGG G ++FRREK++ GGP GG GG+GGDV A LNTL+DF+Y+ Sbjct: 15 FVDIAKIYVKAGDGGDGIVAFRREKYVPAGGPAGGDGGKGGDVIFVADRELNTLLDFKYK 74 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KAQ+GE+G N G GED+++ VPVGT + + + +I DL +EG R I+A GG Sbjct: 75 RHYKAQNGERGGPNNMHGKDGEDLIIKVPVGTVIKDAETGEIIADLSREGDRAIVAHGGR 134 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHF ++T Q P +A G G E + L+LK++AD+G+IG PN GKSTFL+ T A Sbjct: 135 GGRGNAHFATATRQVPRFAEVGEKGDELWVILELKVLADVGLIGYPNVGKSTFLSVATNA 194 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +P+IA+YPFTT YPNLGIV EG + F+LADIPG+I+ A +GAG+G +FL+H ERT VL Sbjct: 195 RPEIANYPFTTKYPNLGIVYISEG-ESFVLADIPGLIEGASEGAGLGHQFLRHVERTKVL 253 Query: 241 LHIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 +HIV S E V+ + I +EL Y+ EL +K +IV +++D D+ E Sbjct: 254 IHIVDVSGSEGREPVE-DFIKINEELKKYSPELAQKPQIVAANKMDLPDAQAYFELFKEE 312 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHD 324 + G + S+ TG GI ++L+ ++ Sbjct: 313 IEKMGYEVYPISAATGMGIREVLKRAYE 340 >gi|73542640|ref|YP_297160.1| GTPase ObgE [Ralstonia eutropha JMP134] gi|123624039|sp|Q46X17|OBG_RALEJ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|72120053|gb|AAZ62316.1| Small GTP-binding protein domain [Ralstonia eutropha JMP134] Length = 365 Score = 268 bits (685), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 155/331 (46%), Positives = 230/331 (69%), Gaps = 7/331 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ +G+GG G SFRREKF+ FGGPDGG GGRGG V+ A N+NTLIDFR Sbjct: 1 MKFIDEARIEAIAGNGGNGSASFRREKFVPFGGPDGGDGGRGGSVFAVADRNINTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + GA G+DV L +PVGT + + D LI DL + GQ++ LA G Sbjct: 61 YAKKHVARNGENGRGSDCYGAAGDDVTLRMPVGTLITDMDTGELIADLTEHGQKVCLAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++ ++ Sbjct: 121 GMGGWGNLHFKSSTNRAPRQQVDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISHIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL+PNLG+V+ +++ F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKVADYPFTTLHPNLGVVRVDHEQSFVVADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLA-RKKN 294 LLHIV + +E V A + I++EL Y+ L K + L+++D V + A R K+ Sbjct: 241 LLHIVDLAPFDEAVDPVAEAKAIVNELKKYDETLYDKPRWLVLNKLDVVPEEERATRVKD 300 Query: 295 ELATQCGQVP-FEFSSITGHGIPQILECLHD 324 + + P F+ S++TG G +++ + D Sbjct: 301 FIKRYKWKGPVFQISALTGDGCRELIYAIKD 331 >gi|120553789|ref|YP_958140.1| GTPase ObgE [Marinobacter aquaeolei VT8] gi|261266888|sp|A1TYY4|OBG_MARAV RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|120323638|gb|ABM17953.1| GTP1/OBG sub domain protein [Marinobacter aquaeolei VT8] Length = 397 Score = 268 bits (685), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 151/328 (46%), Positives = 222/328 (67%), Gaps = 6/328 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G +SFRREK++ GGPDGG GG GG V+++A S LNTLID+R Sbjct: 1 MKFVDEATIIVEAGKGGHGCLSFRREKYVPKGGPDGGDGGDGGSVYLEADSALNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ +KAQ+GE G RN +G KGED+VL VPVGT V + D ++ DL +EGQR+ +A G Sbjct: 61 FQRKYKAQNGEPGAGRNCTGTKGEDLVLPVPVGTTVVDMDTHEVLGDLTKEGQRLKVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP + G G+ + + L+LK++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQTSKGSEGEARNLRLELKVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V + ++ F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKVADYPFTTLVPNLGVVSVQAHQSFVIADIPGLIEGAAEGAGLGIRFLKHLVRTRL 240 Query: 240 LLHIVSALEENVQA---AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V + + A + I EL ++ L + + L+++D V + + Sbjct: 241 LLHLVDVAPYDGSSPADAVRAIAHELEKFSETLASRPRWLVLNKVDMVAEEDREAHCQAI 300 Query: 297 ATQCG-QVP-FEFSSITGHGIPQILECL 322 + G + P F S+++G G +++ + Sbjct: 301 VDELGWEGPVFRISALSGEGTKPLVQAV 328 >gi|86143946|ref|ZP_01062314.1| putative Spo0B-related GTP-binding protein [Leeuwenhoekiella blandensis MED217] gi|85829653|gb|EAQ48116.1| putative Spo0B-related GTP-binding protein [Leeuwenhoekiella blandensis MED217] Length = 337 Score = 268 bits (685), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 151/331 (45%), Positives = 220/331 (66%), Gaps = 11/331 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+++ SG GGAG RREKF+ GGPDGG GGRGG + +A NL TL+ +++ Sbjct: 6 FVDYVKMHVTSGKGGAGSAHLRREKFVAKGGPDGGDGGRGGHIIARANPNLWTLLHLKFK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA HG G K+ +GA GEDV + VP+GT + + + ++ ++ +EGQ I+A GG Sbjct: 66 RHLKAGHGANGGKQTSTGADGEDVYIEVPLGTVIRDTETQEVLKEITEEGQEYIIAEGGM 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+HFK++TNQ P YA PGI GQE + L+LK++AD+G++G PNAGKST L+ +T A Sbjct: 126 GGLGNSHFKTATNQTPRYAQPGIDGQEVDVTLELKVLADVGLVGFPNAGKSTLLSVITAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLGIV+ ++ F++ADIPGII+ A +G G+G RFL+H ER LL Sbjct: 186 KPKIANYEFTTLKPNLGIVQYRDFQTFVIADIPGIIEGAAEGKGLGYRFLRHIERNSTLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A ++ YQ +L EL YN EL K ++ +++ D +D++ A K EL Sbjct: 246 FMIPADAPDIAEQYQILLHELEKYNPELLDKDRLIAITKSDMLDAELKAELKAELDK--- 302 Query: 302 QVPFEF---SSITGHGIPQILECLHDKIFSI 329 +P E+ SS+ G+ Q L D+++++ Sbjct: 303 NLPIEYMFISSVAQQGLTQ----LKDRLWAM 329 >gi|206603249|gb|EDZ39729.1| Putative GTP binding protein [Leptospirillum sp. Group II '5-way CG'] Length = 360 Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 155/334 (46%), Positives = 221/334 (66%), Gaps = 8/334 (2%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+DEA++ I SG GG G +SFRREK++ GGPDGG GGRGGDV T +TL+DF++ Sbjct: 3 QFVDEARIAIESGKGGHGCVSFRREKYVPRGGPDGGDGGRGGDVVFVGTHRKSTLLDFKH 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + KAQ GE G + + G+ G +VL VP+GTQ+ +E+ L+ DL Q RI++A GG Sbjct: 63 RTILKAQPGEAGRGKKQHGSNGRSLVLEVPLGTQILDEETGELLYDLTQPDARIVVAKGG 122 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN HF ++T Q P +A PG Q I L+LK++A +G++G PNAGKSTFL+ VT+ Sbjct: 123 RGGRGNVHFATATRQTPDFAEPGGESQSFRIRLELKVMARVGLVGFPNAGKSTFLSRVTK 182 Query: 182 AKPKIADYPFTTLYPNLGIVKEG----YKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 A P+IA YPFTTL+P+LG++ G +E ++AD+PG+I+ AH+G G+G +FLKH ERT Sbjct: 183 AHPRIASYPFTTLHPHLGVLLLGNPPDEREIVIADLPGLIEGAHEGKGLGIQFLKHVERT 242 Query: 238 HVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 +LLH V EN + AYQ + +E+ A+N +L +K EI+ ++ D+ D D LA Sbjct: 243 EILLHFVDLSAENTHSPTEAYQIVRNEMLAFNKDLARKPEILVGTKKDSADPDRLAELGA 302 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 LA + G+ SS TG G+P +L L + + S Sbjct: 303 FLARE-GRPKLFLSSHTGEGLPDLLSVLSETLPS 335 >gi|77461079|ref|YP_350586.1| GTPase ObgE [Pseudomonas fluorescens Pf0-1] gi|123603228|sp|Q3K6K9|OBG_PSEPF RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|77385082|gb|ABA76595.1| putative GTP-binding protein [Pseudomonas fluorescens Pf0-1] Length = 407 Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 141/288 (48%), Positives = 203/288 (70%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +++GDGG G +SFRREKFIE GGP+GG GG GG +++ A NLNTL+D+R Sbjct: 1 MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSIFMMADENLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HF A+ G G + +G KGED++L VPVGT V + +I DL + GQ++++ G Sbjct: 61 YTRHFDAERGSNGGSTDCTGKKGEDLILRVPVGTTVIDSATQEVIGDLTKAGQKLMVVQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G+++ + L++K++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGEQRDLKLEMKVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVDRWKSFVIADIPGLIEGASDGAGLGIRFLKHLARTRL 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH+V E + A + I++EL ++ L ++ + L++ D + Sbjct: 241 LLHLVDMAPLDESSAPDAAEVIVNELIKFSPSLAERDRWLVLNKCDQI 288 >gi|121603660|ref|YP_980989.1| GTPase ObgE [Polaromonas naphthalenivorans CJ2] gi|261277667|sp|A1VK90|OBG_POLNA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|120592629|gb|ABM36068.1| GTP1/OBG sub domain protein [Polaromonas naphthalenivorans CJ2] Length = 364 Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 152/338 (44%), Positives = 234/338 (69%), Gaps = 9/338 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + I +GDGG+G +SF EK+ EFGGP+GG GGRGG V+ A NLNTL+DFR Sbjct: 1 MKFVDEAYIDIAAGDGGSGCVSFSHEKYKEFGGPNGGDGGRGGHVYAVADINLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + +A++G GM + GAKG+D++L +PVGT + + + ++ +L G++I++A G Sbjct: 61 FSRRHEARNGGHGMGSDMFGAKGDDIILKMPVGTILTDAETGEVLFELLVPGEQILIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKSSTN+AP PG G K + L+LK++AD+G++G+PNAGKSTF+++V+ Sbjct: 121 GDGGFGNLRFKSSTNRAPRSKTPGWPGDRKSLKLELKVLADVGLLGMPNAGKSTFISAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P+IADYPFTTL+PNLG+V+ G ++ F++AD+PG+I+ A +GAG+G FL+H +RT + Sbjct: 181 NARPRIADYPFTTLHPNLGVVRVGPEQSFVVADLPGLIEGASEGAGLGHLFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV + +E V Q I+ EL Y+ L KK + L+++D +D+D A + Sbjct: 241 LLHIVDLAPFDEGVDPVAQAKAIVGELKKYDEALYKKPRWLVLNKLDMIDADERAAVVKD 300 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKIFSIR 330 + G V FE S++T G Q+++ ++ + ++ Sbjct: 301 FVKRFKFKGPV-FEISALTREGCEQLVKTIYQHVKKVQ 337 >gi|319790284|ref|YP_004151917.1| GTP-binding protein Obg/CgtA [Thermovibrio ammonificans HB-1] gi|317114786|gb|ADU97276.1| GTP-binding protein Obg/CgtA [Thermovibrio ammonificans HB-1] Length = 345 Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 147/327 (44%), Positives = 226/327 (69%), Gaps = 2/327 (0%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D AK++++ G GG G ++FRREKF+ GGP GGSGG+GGDV + A N++TL+DF+Y Sbjct: 3 QFIDRAKIFVQGGHGGNGCVAFRREKFVPKGGPSGGSGGKGGDVVLVADRNVHTLLDFKY 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 ++H++A+ G G RSG GED+++ VPVGT V + + ++ DL + GQR+++A GG Sbjct: 63 KRHYRAERGRHGEGNKRSGKSGEDLIIKVPVGTVVRDAETGEVLGDLTEHGQRLVVARGG 122 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA F + T +AP +A PG G+E+ I L+LKL+AD+G++G PNAGKSTFL+ V+ Sbjct: 123 RGGRGNAEFATPTRRAPDFAEPGEPGEERWIELELKLLADVGLVGFPNAGKSTFLSRVSA 182 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A+P+IADYPFTTL P LG+ K G F++ADIPG+I+ AHQG G+G FL+H ERT +LL Sbjct: 183 ARPEIADYPFTTLRPILGVAKVGDHSFVVADIPGLIEGAHQGKGLGHEFLRHVERTKLLL 242 Query: 242 HIVSALE--ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 H++ + + A++ I ELS Y+ EL +K +IV +++D + ++ + + Sbjct: 243 HLIDLTDPTRTPEEAFEAINRELSLYSPELARKPQIVVGTKLDALHDRSVLDRLRRFFAE 302 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKI 326 G F S++TG G+ +++ + +K+ Sbjct: 303 KGYPFFAVSAVTGEGMDRLMGFVSEKL 329 >gi|222529113|ref|YP_002572995.1| GTPase ObgE [Caldicellulosiruptor bescii DSM 6725] gi|261266657|sp|B9MRB8|OBG_ANATD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|222455960|gb|ACM60222.1| GTP-binding protein Obg/CgtA [Caldicellulosiruptor bescii DSM 6725] Length = 427 Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 155/328 (47%), Positives = 222/328 (67%), Gaps = 8/328 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+Y+++GDGG G ++FRREK++ GGP GG GG+GGDV A LNTL+DF+Y+ Sbjct: 2 FVDIAKIYVKAGDGGDGIVAFRREKYVPAGGPAGGDGGKGGDVIFVADRELNTLLDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KAQ+GE+G N G GED+++ VPVGT + + + +I DL +EG R I+A GG Sbjct: 62 RHYKAQNGERGGPNNMHGKDGEDLIIKVPVGTVIKDAETGEIIADLSREGDRAIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+HF +ST Q P +A G G E + L+LK++AD+G+IG PN GKSTFL+ T A Sbjct: 122 GGRGNSHFATSTRQVPRFAEVGEKGDELWVILELKVLADVGLIGYPNVGKSTFLSVATNA 181 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +P+IA+YPFTT YPNLGIV EG + F+LADIPG+I+ A +GAG+G +FL+H ERT VL Sbjct: 182 RPEIANYPFTTKYPNLGIVYISEG-ESFVLADIPGLIEGASEGAGLGHQFLRHVERTKVL 240 Query: 241 LHIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 +HIV S E V+ + I +EL Y+ EL +K +IV +++D D+ E Sbjct: 241 IHIVDVSGSEGREPVE-DFIKINEELKKYSPELAQKPQIVAANKMDLPDAQAYFELFKEE 299 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHD 324 + G + S+ TG G+ ++L+ ++ Sbjct: 300 IEKMGYEVYPVSAATGMGVREVLKRAYE 327 >gi|70732632|ref|YP_262395.1| GTPase ObgE [Pseudomonas fluorescens Pf-5] gi|123652811|sp|Q4K5T8|OBG_PSEF5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|68346931|gb|AAY94537.1| GTP-binding protein, GTP1/Obg family [Pseudomonas fluorescens Pf-5] Length = 407 Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 144/288 (50%), Positives = 206/288 (71%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +++GDGG G +SFRREKFIE GGP+GG GG GG +++ A NLNTL+D+R Sbjct: 1 MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSIYMVADENLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HF A+ G G + +G KGED+ L VPVGT + + +I DL + GQR+++ G Sbjct: 61 YTRHFDAERGSNGGSTDCTGKKGEDLELRVPVGTTIIDAGTQEVIGDLTKAGQRLMVVQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G+++ + L+LK++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGEQRDLKLELKVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVDRWKSFVIADIPGLIEGASDGAGLGIRFLKHLARTRI 240 Query: 240 LLHIV--SALEENVQA-AYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH+V + L+E+ A A + I++EL ++ L ++ + L++ D + Sbjct: 241 LLHLVDMAPLDESSPADAAEVIVNELMKFSPSLAERERWLVLNKSDQI 288 >gi|312127823|ref|YP_003992697.1| gtp-binding protein obg/cgta [Caldicellulosiruptor hydrothermalis 108] gi|311777842|gb|ADQ07328.1| GTP-binding protein Obg/CgtA [Caldicellulosiruptor hydrothermalis 108] Length = 440 Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 155/328 (47%), Positives = 222/328 (67%), Gaps = 8/328 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+Y+++GDGG G ++FRREK++ GGP GG GG+GGDV A LNTL+DF+Y+ Sbjct: 15 FVDIAKIYVKAGDGGDGIVAFRREKYVPAGGPAGGDGGKGGDVIFVADRELNTLLDFKYK 74 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KAQ+GE+G N G GED+++ VPVGT + + + +I DL +EG R I+A GG Sbjct: 75 RHYKAQNGERGGPNNMHGKDGEDLIIKVPVGTVIKDAETGEIIADLSREGDRAIVAHGGR 134 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHF ++T Q P +A G G E + L+LK++AD+G+IG PN GKSTFL+ T A Sbjct: 135 GGRGNAHFATATRQVPRFAEVGEKGDELWVILELKVLADVGLIGYPNVGKSTFLSVATNA 194 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +P+IA+YPFTT YPNLGIV EG + F+LADIPG+I+ A +GAG+G +FL+H ERT VL Sbjct: 195 RPEIANYPFTTKYPNLGIVYISEG-ESFVLADIPGLIEGASEGAGLGHQFLRHVERTKVL 253 Query: 241 LHIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 +HIV S E V+ + I +EL Y+ EL +K +IV +++D D+ E Sbjct: 254 IHIVDVSGSEGREPVE-DFIKINEELKKYSPELAQKPQIVAANKMDLPDAQAYFELFKEE 312 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHD 324 + G + S+ TG G+ ++L+ ++ Sbjct: 313 IEKMGYEVYPISAATGMGVREVLKKAYE 340 >gi|323527407|ref|YP_004229560.1| GTP-binding protein Obg/CgtA [Burkholderia sp. CCGE1001] gi|323384409|gb|ADX56500.1| GTP-binding protein Obg/CgtA [Burkholderia sp. CCGE1001] Length = 373 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 153/333 (45%), Positives = 224/333 (67%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVIAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A++GE G + G G+D+ L +PVGT + + + LI DL + Q + +A G Sbjct: 61 YAKKHQARNGENGRGSDCYGKGGDDITLRMPVGTTITDMETGELIADLTEHNQSVQIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMVRLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ G + F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLAPNLGVVRVGPSRSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV + +E+V A + I++EL Y+ +L +K + L+++D V D + + Sbjct: 241 LLHIVDLAPFDESVDPVAEAKAIVNELRKYDEQLYQKPRWLVLNKLDMVPEDEREARVSA 300 Query: 296 LATQCGQ--VPFEFSSITGHGIPQILECLHDKI 326 G FE S++TG G + ++D I Sbjct: 301 FLEGFGWDGPVFEISALTGQGCESLCYAVYDHI 333 >gi|145219046|ref|YP_001129755.1| GTPase ObgE [Prosthecochloris vibrioformis DSM 265] gi|261277680|sp|A4SCP4|OBG_PROVI RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|145205210|gb|ABP36253.1| GTP1/OBG sub domain protein [Chlorobium phaeovibrioides DSM 265] Length = 336 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 145/327 (44%), Positives = 222/327 (67%), Gaps = 6/327 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D A V++++GDGG G +SFRREK++ GGPDGG GG GG+VW++ S+L TL+DF+ Sbjct: 1 MKFVDSATVFVQAGDGGRGCVSFRREKYVPKGGPDGGDGGDGGNVWLRTNSHLTTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ + A G GM ++G KG+D+V+ VP+GT V + + +I DL + + I++A G Sbjct: 61 YRKKYLAPRGAHGMGSRKAGRKGKDIVIDVPIGTLVRNAESMEVIADLTRPDEEIMIARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HF +STNQAP + PG G+E + ++LKL+AD+G++G PNAGKST ++ ++ Sbjct: 121 GHGGRGNQHFATSTNQAPRRSEPGWKGEELELAMELKLMADVGLVGFPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLGIV+ E YK F++ADIPGII+ A +G G+G +FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGIVRYEEYKSFVMADIPGIIEGAAEGRGLGLQFLRHIERTKI 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L +VSA ++ A Y ++ EL + L +K ++ ++++D D + + E Sbjct: 241 LALLVSADSPDILAEYGTLVAELEKFGHGLIQKPRLLVVTKMDIAPGDFVVPEAPE---- 296 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKI 326 G SS+ G G+ ++ + L ++ Sbjct: 297 -GVGLIAVSSVAGKGMKELKDELWRQV 322 >gi|119477520|ref|ZP_01617711.1| GTP-binding protein, GTP1/Obg family [marine gamma proteobacterium HTCC2143] gi|119449446|gb|EAW30685.1| GTP-binding protein, GTP1/Obg family [marine gamma proteobacterium HTCC2143] Length = 406 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 145/307 (47%), Positives = 215/307 (70%), Gaps = 11/307 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +++G GG G +SFRREK+I GGPDGG GG GG VW+QA +NT++D+R Sbjct: 1 MKFVDEASIKVQAGRGGNGSLSFRREKYIAKGGPDGGDGGDGGSVWLQADYAVNTMVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+H++A+ G++G R+ +G G+D+ L VPVGT + +ED ++ DL + GQRI +A G Sbjct: 61 FQRHYEAESGKQGRGRDCTGRGGDDLTLNVPVGTTIIDEDTQEVLGDLAKHGQRIKVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSSTN+AP +PG G+ + + L+LK++AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GFHGLGNARFKSSTNRAPRQTSPGSDGEFRSLQLELKVLADVGLLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+A YPFTTL PNLG+VK + ++ F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 SAKPKVAGYPFTTLVPNLGVVKVQAHRSFVIADIPGLIEGASEGAGLGVRFLKHLTRTRL 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHIV + A + I++EL ++ L ++ + L+++D + + E Sbjct: 241 LLHIVDMAPFDGTDPATAVKSIVNELERFSPTLHQRDRWLVLNKMDLLPEE-------ER 293 Query: 297 ATQCGQV 303 +C QV Sbjct: 294 KERCKQV 300 >gi|78186055|ref|YP_374098.1| GTPase ObgE [Chlorobium luteolum DSM 273] gi|123583581|sp|Q3B6H6|OBG_PELLD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|78165957|gb|ABB23055.1| GTP-binding protein Obg [Chlorobium luteolum DSM 273] Length = 343 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 150/336 (44%), Positives = 225/336 (66%), Gaps = 9/336 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D A +++++G+GG G +SFRREKF+ GGPDGG GG GG+VW++ S+L TL+DF+ Sbjct: 1 MKFVDSASIFVQAGEGGRGCVSFRREKFVPKGGPDGGDGGNGGNVWLRTNSHLTTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ + A G G +SG KG D+ + VP GT V L+ D+ +G+ +++A G Sbjct: 61 YRKKYLAPRGSHGQGSRKSGRKGADIYIDVPCGTLVRNAATQELLADMTGDGEEVMIARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HF +STNQAP + PG G+E + ++LKL+AD+G++G PNAGKST ++ ++ Sbjct: 121 GHGGRGNQHFATSTNQAPRRSEPGWKGEELQLDMELKLMADVGLVGFPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLGIV+ E YK F++ADIPGII+ A +G G+G +FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGIVRYEEYKSFVMADIPGIIEGAAEGRGLGLQFLRHIERTKI 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKKNELAT 298 L +VSA E+V+A YQ ++ EL + L +K I+ ++++D D TL +E+ Sbjct: 241 LAVLVSADAEDVEAEYQTLVGELEKFGRGLDEKPRILVVTKMDIAPEDFTLPAPGDEVHV 300 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 SS+ G G+ ++ + L ++ S+R E Sbjct: 301 ------LAISSVAGMGLKELKDELWREV-SMRDRPE 329 >gi|288941869|ref|YP_003444109.1| GTP-binding protein Obg/CgtA [Allochromatium vinosum DSM 180] gi|288897241|gb|ADC63077.1| GTP-binding protein Obg/CgtA [Allochromatium vinosum DSM 180] Length = 370 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 152/342 (44%), Positives = 234/342 (68%), Gaps = 9/342 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GG V++ A +N+NTL+DFR Sbjct: 1 MKFVDEAVIRVEAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGSVYLIADNNINTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A+ GE G ++ +G G+D+ + VPVGT+VF+++ LI +L + GQR+++A G Sbjct: 61 YLRKHRAERGENGKGKHMTGRSGQDLTVPVPVGTRVFDQETEELIGELLEPGQRLLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA +KSSTN+AP + PG G+ + ++L+L L+AD+G++G PNAGKS+ + V+ Sbjct: 121 GFHGIGNARYKSSTNRAPRQSKPGTPGERRDLFLELILLADVGLLGFPNAGKSSLIRKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTLYPNLG+V+ G + F++ADIPG+I+ A +GAG+G FLKH RT + Sbjct: 181 SARPKVADYPFTTLYPNLGVVRVGERRSFVIADIPGVIEGAAEGAGLGIHFLKHLARTRL 240 Query: 240 LLHIV--SALEENVQAAYQC--ILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + L+EN+ A Q I EL A+ + L K + L++ID ++ + ++ + Sbjct: 241 LLHLVDIAPLDENLDPADQVRKIEAELDAFGAGLLDKERWLVLNKIDQLEPEDHEARRAQ 300 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + Q G V S++TG G ++ L ++ +++ + E Sbjct: 301 IVEQLDWRGPV-HTISALTGAGTEALVNDLMHRLEALKADPE 341 >gi|229592553|ref|YP_002874672.1| GTPase ObgE [Pseudomonas fluorescens SBW25] gi|229364419|emb|CAY52219.1| putative putative GTP-binding protein [Pseudomonas fluorescens SBW25] Length = 407 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 140/288 (48%), Positives = 203/288 (70%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +++GDGG G +SFRREKFIE GGP+GG GG GG +++ A NLNTL+D+R Sbjct: 1 MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSIYMMADENLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HF A+ G G + +G KGED+VL VPVGT + + +I DL + GQ++++ G Sbjct: 61 YTRHFDAERGSNGGSTDCTGKKGEDLVLRVPVGTTIIDSATQEVIGDLTKAGQKLMVVQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G+++ + L++K++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGEQRDLKLEMKVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVDRWKSFVIADIPGLIEGASDGAGLGIRFLKHLSRTRL 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH+V + + A + I+ EL+ ++ L ++ + L++ D + Sbjct: 241 LLHLVDMAPLDDTSAPDAAEVIVSELTKFSPALAERDRWLVLNKCDQI 288 >gi|307543901|ref|YP_003896380.1| GTPase ObgE [Halomonas elongata DSM 2581] gi|307215925|emb|CBV41195.1| GTPase ObgE [Halomonas elongata DSM 2581] Length = 395 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 151/341 (44%), Positives = 224/341 (65%), Gaps = 7/341 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + + +G GG G +SFRREK++ GGPDGG GG GG V + LNTLIDF+ Sbjct: 1 MQFVDEASIIVEAGKGGNGCLSFRREKYVPKGGPDGGDGGHGGSVHLIGDDALNTLIDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ+ +KAQ+G+ G R SG GED+ + VPVGT V +ED + +I D+ + GQ +++A G Sbjct: 61 YQRFYKAQNGQPGQGRQMSGRAGEDLHIKVPVGTTVIDEDTLEVIADVTEAGQVVLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN HFKSSTN+AP PG G+ + + ++K++AD+G++G+PNAGKST + SV+ Sbjct: 121 GRRGLGNIHFKSSTNRAPRRTTPGTEGERRNLRFEMKVMADVGLLGMPNAGKSTLIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+A+YPFTTL PNLG+VK G E F++AD+PG+I+ A GAG+G RFLKH RT + Sbjct: 181 AAKPKVANYPFTTLVPNLGVVKLGQHEHFVMADVPGLIEGASDGAGLGLRFLKHLTRTRL 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V E + A + I EL ++ L ++ + L+++D + ++ +++ Sbjct: 241 LLHVVDVAPFDESDPVEAARSIAHELGQFSPALAERPRWLVLNKLDLLPAEEREAVADDI 300 Query: 297 ATQCG-QVP-FEFSSITGHGIPQILECLHDKIFSIRG-ENE 334 + Q P F S+I+G G +++ +H + R ENE Sbjct: 301 VARLAWQGPVFRLSAISGEGTDALVQAVHRWLTEQRRLENE 341 >gi|312134964|ref|YP_004002302.1| gtp-binding protein obg/cgta [Caldicellulosiruptor owensensis OL] gi|311775015|gb|ADQ04502.1| GTP-binding protein Obg/CgtA [Caldicellulosiruptor owensensis OL] Length = 427 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 154/328 (46%), Positives = 223/328 (67%), Gaps = 8/328 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+++++GDGG G ++FRREK++ GGP GG GG+GGDV A LNTL+DF+Y+ Sbjct: 2 FVDIAKIFVKAGDGGDGIVAFRREKYVPAGGPAGGDGGKGGDVIFVADRELNTLLDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KAQ+GE+G N G GED+++ VPVGT + + + +I DL +EG R I+A GG Sbjct: 62 RHYKAQNGERGGPNNMHGKDGEDLIIKVPVGTVIKDAETGEIIADLSREGDRAIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHF ++T Q P +A G G E + L+LK++AD+G+IG PN GKSTFL+ T A Sbjct: 122 GGRGNAHFATATRQVPRFAEVGEKGDELWVILELKVLADVGLIGYPNVGKSTFLSVATNA 181 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +P+IA+YPFTT YPNLGIV EG + F+LADIPG+I+ A +GAG+G +FL+H ERT VL Sbjct: 182 RPEIANYPFTTKYPNLGIVYISEG-ESFVLADIPGLIEGASEGAGLGHQFLRHVERTKVL 240 Query: 241 LHIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 +HIV S E V+ + I +EL Y+ EL +K +IV +++D D+ E Sbjct: 241 IHIVDVSGSEGREPVE-DFIKINEELKKYSPELAQKPQIVAANKMDLPDAQAYFELFKEE 299 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHD 324 + G + S++TG G+ ++L+ ++ Sbjct: 300 IEKMGYEVYPVSAVTGMGVREVLKRAYE 327 >gi|120612317|ref|YP_971995.1| GTPase ObgE [Acidovorax citrulli AAC00-1] gi|261266625|sp|A1TTD3|OBG_ACIAC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|120590781|gb|ABM34221.1| GTP1/OBG sub domain protein [Acidovorax citrulli AAC00-1] Length = 357 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 150/334 (44%), Positives = 231/334 (69%), Gaps = 9/334 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFR EK+ EFGGP+GG GGRGG V+ A +LNTL+D+R Sbjct: 1 MKFVDEAFIDVAAGDGGNGCVSFRHEKYKEFGGPNGGDGGRGGHVFAVADPSLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A+ GE GM + GA G+D+ L +PVGT + + D ++ +L + G+ I +A G Sbjct: 61 YSRRHEAKRGEHGMGSDMFGAAGDDITLKMPVGTIISDADTGEVLFELLKPGETITIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKS+ N+AP PG G+ + + L+LK++AD+G++G+PNAGKSTF+A+V+ Sbjct: 121 GDGGFGNMRFKSAINRAPRQKTPGWPGERRNLKLELKVLADVGLLGMPNAGKSTFIAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G ++ F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVGPEQSFVVADIPGLIEGASEGAGLGHQFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E+V Q I+ EL Y++EL +K + L+++D V D A + + Sbjct: 241 LLHVVDLAPFDESVDPVAQATAIVGELRKYDAELYEKPRWLVLNKLDMVPGDERAARVKD 300 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKI 326 + G V FE S++T G +++ ++ + Sbjct: 301 FVKRFRWKGPV-FEISALTREGCEPLIQAIYQHV 333 >gi|34540573|ref|NP_905052.1| GTPase ObgE [Porphyromonas gingivalis W83] gi|188994677|ref|YP_001928929.1| GTPase ObgE [Porphyromonas gingivalis ATCC 33277] gi|81833797|sp|Q7MW55|OBG_PORGI RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277670|sp|B2RIY7|OBG_PORG3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|34396886|gb|AAQ65951.1| GTP-binding protein Obg [Porphyromonas gingivalis W83] gi|188594357|dbj|BAG33332.1| GTP-binding protein [Porphyromonas gingivalis ATCC 33277] Length = 394 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 146/326 (44%), Positives = 214/326 (65%), Gaps = 5/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G FRREK+I GGPDGG GGRGG V+++ N TL+ RY Sbjct: 7 FVDYVKIYCRSGKGGRGSTHFRREKYIPKGGPDGGDGGRGGHVFLRGNRNYWTLLHLRYD 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A +G+ G + +GA GED ++ VP GT V++ D I D+ + GQ+++L GG Sbjct: 67 RHIMATNGQSGGAKRSTGANGEDRIIEVPCGTAVYDADTGEFITDITEHGQQVMLLQGGR 126 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK++TNQAP YA PG QE+++ ++LK++AD+G++G PNAGKST L+ +T A Sbjct: 127 GGHGNTFFKTATNQAPRYAQPGEPAQERMVIMQLKMLADVGLVGFPNAGKSTLLSVLTAA 186 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTTL PNLGIV + F++ADIPGII+ A G G+G RFL+H ER +LL Sbjct: 187 KPKIANYPFTTLEPNLGIVAYRDKRSFVMADIPGIIEGASSGKGLGLRFLRHIERNALLL 246 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A +N+ Y+ + EL AYN EL +K +++ +++ D +D + + EL T Sbjct: 247 FMIPADTDNIAKEYEILSRELVAYNEELAQKRKVLAITKCDLIDEELCEMLREELPT--- 303 Query: 302 QVPFEF-SSITGHGIPQILECLHDKI 326 +P F S++ G+ ++ + L ++ Sbjct: 304 GLPVVFISAVAQQGLEELKDTLWKEL 329 >gi|121593265|ref|YP_985161.1| GTPase ObgE [Acidovorax sp. JS42] gi|120605345|gb|ABM41085.1| GTP1/OBG sub domain protein [Acidovorax sp. JS42] Length = 379 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 151/336 (44%), Positives = 230/336 (68%), Gaps = 9/336 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFR EK+ EFGGP+GG GGRGG V+ A NLNTL+DFR Sbjct: 23 MKFVDEAFIDVAAGDGGNGCVSFRHEKYKEFGGPNGGDGGRGGHVFAVADPNLNTLVDFR 82 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A+ GE GM + GA G D+ L +PVGT + + D L+ +L G+ + +A G Sbjct: 83 YSRRHEAKRGEHGMGSDMFGAAGADITLKMPVGTIISDADTGELLYELLTPGEVVTIAKG 142 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKS+ N+AP PG G+ K + L+LK++AD+G++G+PNAGKSTF+A+V+ Sbjct: 143 GDGGFGNLRFKSAINRAPRQKTPGWPGERKSLKLELKVLADVGLLGMPNAGKSTFIAAVS 202 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G ++ F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 203 NARPKIADYPFTTLHPNLGVVRVGPEQSFVVADIPGLIEGASEGAGLGHQFLRHLQRTRL 262 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E+V Q I+ EL Y+++L +K + L+++D V ++ A + + Sbjct: 263 LLHVVDMAPFDESVDPVAQAKAIVAELKKYDTQLYEKPRWLVLNKLDMVPAEERAARVKD 322 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKIFS 328 + G V FE S++T G +++ + + + Sbjct: 323 FVKRFKWKGPV-FEISALTREGCEPLVQSIFQHVHA 357 >gi|93006507|ref|YP_580944.1| GTPase ObgE [Psychrobacter cryohalolentis K5] gi|122415127|sp|Q1QA43|OBG_PSYCK RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|92394185|gb|ABE75460.1| GTP1/OBG subdomain [Psychrobacter cryohalolentis K5] Length = 405 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 153/325 (47%), Positives = 218/325 (67%), Gaps = 8/325 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA V +++GDGG G SFRREK++ GGPDGG GG+GGDV++ A N NTL+D+R Sbjct: 1 MRFIDEAVVTVKAGDGGNGIASFRREKYVPRGGPDGGDGGKGGDVYVIAEDNTNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A E G RN SG +D+ L VP+GT V + + ++ DL + GQ +++A G Sbjct: 61 YTRRHDAMRAENGHSRNCSGKGSDDLFLPVPIGTTVVDTETDEVLGDLIEIGQTLLIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSSTNQAP A G G+ K++ +LK++AD+G+IGLPNAGKSTF+ V+ Sbjct: 121 GDGGLGNTHFKSSTNQAPRKATSGFEGELKVLKFELKVVADVGLIGLPNAGKSTFIRQVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V G ++ F++ADIPG+I+ A +GAG+G RFLKH RT Sbjct: 181 AARPKVADYPFTTLVPNLGVVDIGRHRSFVMADIPGLIEGASEGAGLGIRFLKHVARTRR 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + V+ A + IL+EL ++ EL +I+ L++ID V + L Sbjct: 241 LLHLVDIKPIDGSDPVENA-RVILNELERFSPELANLPQILVLNKIDQVPEEELNELCTH 299 Query: 296 LATQCGQ--VPFEFSSITGHGIPQI 318 + + G + F +++TG G+ I Sbjct: 300 IVAELGWTGIVFRTATLTGEGVDAI 324 >gi|261266651|sp|A1W4B0|OBG_ACISJ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 357 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 151/336 (44%), Positives = 230/336 (68%), Gaps = 9/336 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFR EK+ EFGGP+GG GGRGG V+ A NLNTL+DFR Sbjct: 1 MKFVDEAFIDVAAGDGGNGCVSFRHEKYKEFGGPNGGDGGRGGHVFAVADPNLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A+ GE GM + GA G D+ L +PVGT + + D L+ +L G+ + +A G Sbjct: 61 YSRRHEAKRGEHGMGSDMFGAAGADITLKMPVGTIISDADTGELLYELLTPGEVVTIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKS+ N+AP PG G+ K + L+LK++AD+G++G+PNAGKSTF+A+V+ Sbjct: 121 GDGGFGNLRFKSAINRAPRQKTPGWPGERKSLKLELKVLADVGLLGMPNAGKSTFIAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G ++ F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVGPEQSFVVADIPGLIEGASEGAGLGHQFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E+V Q I+ EL Y+++L +K + L+++D V ++ A + + Sbjct: 241 LLHVVDMAPFDESVDPVAQAKAIVAELKKYDTQLYEKPRWLVLNKLDMVPAEERAARVKD 300 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKIFS 328 + G V FE S++T G +++ + + + Sbjct: 301 FVKRFKWKGPV-FEISALTREGCEPLVQSIFQHVHA 335 >gi|269836761|ref|YP_003318989.1| GTP-binding protein Obg/CgtA [Sphaerobacter thermophilus DSM 20745] gi|269786024|gb|ACZ38167.1| GTP-binding protein Obg/CgtA [Sphaerobacter thermophilus DSM 20745] Length = 466 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 147/331 (44%), Positives = 223/331 (67%), Gaps = 7/331 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+Y+++GDGG G ISFRREK++ FGGPDGG GG GGDV+++ +LNTLI F+Y+ Sbjct: 2 FYDRAKIYVKAGDGGNGAISFRREKYVPFGGPDGGDGGDGGDVYLRVDPHLNTLIAFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 QHF+A+ GE G ++G +G + + VP GT V +++ ++ DL G+ + +A GG Sbjct: 62 QHFRAERGESGQGAKKTGKRGAHLYIDVPPGTVVMDDETGRVLADLVHPGEVVRVARGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F ++T QAP A G G+E+ I L++KLIAD+G++GLPNAGKST LA+ + A Sbjct: 122 GGLGNARFATATRQAPRMAEKGEPGEERWIRLEMKLIADVGLVGLPNAGKSTLLAASSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK---EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +PKIADYPFTT+ P LG+V+ G + F++ADIPG+I+ A +G G+G FL+H ERT + Sbjct: 182 RPKIADYPFTTITPMLGVVEIGGPGGETFVMADIPGLIEGAAEGVGLGHEFLRHIERTRL 241 Query: 240 LLHIVS---ALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 L+H++ LE + ++ I +EL+AY EL ++ +IV +++ID ++ + E Sbjct: 242 LIHVLDGSGGLEGRDPLEDFRTINEELAAYAPELAERPQIVAINKIDLPETQANLPRLTE 301 Query: 296 LATQCGQVPFEFSSITGHGIPQILECLHDKI 326 T+ G F S+ T G+P +L + +++ Sbjct: 302 ALTREGYEVFPISAATTEGVPALLARVLERL 332 >gi|323142718|ref|ZP_08077435.1| Obg family GTPase CgtA [Succinatimonas hippei YIT 12066] gi|322417513|gb|EFY08130.1| Obg family GTPase CgtA [Succinatimonas hippei YIT 12066] Length = 382 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 148/340 (43%), Positives = 224/340 (65%), Gaps = 9/340 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK++ GGPDGG GG GG+V++ SNLNTL+D+R Sbjct: 1 MKFVDEATIRVEAGDGGNGCVSFRREKYVPRGGPDGGDGGDGGNVYVVTDSNLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + +KA+ G+ GM + +GA+G+D+ L VPVGT++ + + ++ DL +E + + +A G Sbjct: 61 FTKFYKAERGQNGMSSDCTGARGQDIYLKVPVGTRITDAETAEVLGDLRKENEVLCVARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G+GN HFKS TN+AP G G+ +I+ L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GRHGYGNTHFKSPTNRAPRQKTNGTPGERRILDLELLLVADVGLLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+VK G E F++AD+PG+I+ A +GAG+G RFL+H ER V Sbjct: 181 AARPKVADYPFTTLVPNLGVVKTGNGESFVIADVPGLIEGASEGAGLGHRFLRHLERCRV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS----DTLARK 292 LLH+V A+ + Q I EL Y +L K + L++ D V + L+R Sbjct: 241 LLHLVDAMPVDGSDPARNAQIIEQELKQYAHDLFDKPRYLVLNKADLVSEEEAQEILSRV 300 Query: 293 KNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + L + + F S++ + +L + D + ++ E Sbjct: 301 VDALEVKPEET-FIISALKNENLNSLLHKVQDLVDKVKEE 339 >gi|297569130|ref|YP_003690474.1| GTP-binding protein Obg/CgtA [Desulfurivibrio alkaliphilus AHT2] gi|296925045|gb|ADH85855.1| GTP-binding protein Obg/CgtA [Desulfurivibrio alkaliphilus AHT2] Length = 378 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 156/358 (43%), Positives = 232/358 (64%), Gaps = 25/358 (6%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DEAK +R+G+GG G +SFRREKF+ GGPDGG GGRGGDV ++A+ L++L+DF+ Sbjct: 1 MSFIDEAKFLVRAGNGGNGCVSFRREKFVPKGGPDGGDGGRGGDVVLEASGRLDSLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+ HF AQ+G G + G G D ++ VPVG+ + + + ++ DL EGQ++++A G Sbjct: 61 YRSHFIAQNGAHGRGKKMHGRSGADCLVKVPVGSVIRDAESGEVLADLVAEGQQLLVASG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+TN+AP A G GQE+ + ++LKL+AD+G+IGLPNAGKST LAS+T Sbjct: 121 GQGGRGNVHFASATNRAPRTATKGTTGQERWLKIELKLLADVGLIGLPNAGKSTLLASLT 180 Query: 181 RAKPKIADYPFTTLYPNLGI-VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PKIADYPFTTL P LG+ + G + LADIPG+I++AHQGAG+G FL+H ERT + Sbjct: 181 AATPKIADYPFTTLSPQLGVLLLPGQRPCTLADIPGLIEDAHQGAGLGHTFLRHIERTRL 240 Query: 240 LLHIVSAL----EENVQAA------YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT- 288 LL +++ + + V AA Y + EL Y+ +L ++ +V L++ID + S Sbjct: 241 LLQVIAVVPPGGDPEVDAAADPLAQYHLLARELGLYSHDLAQRPRLVVLNKIDLLASPAA 300 Query: 289 ------------LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 LAR K A + Q+ S++TG G+ ++++ + ++ ++ E + Sbjct: 301 AEEGERATAAAELARLKERFAAENVQL-LPVSALTGEGLDELIKAIDGQLPAVADEQD 357 >gi|88798156|ref|ZP_01113742.1| GTP-binding protein, GTP1/Obg family [Reinekea sp. MED297] gi|88778932|gb|EAR10121.1| GTP-binding protein, GTP1/Obg family [Reinekea sp. MED297] Length = 397 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 143/288 (49%), Positives = 202/288 (70%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G +SFRREKFI GGPDGG GG GG +W++A N+NTLID+R Sbjct: 1 MKFVDEATIAVEAGKGGNGCVSFRREKFIAKGGPDGGDGGHGGSIWVKADENVNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +KA++G++GM + +G KG+D LTVPVGT V + D ++ DL + GQ +A G Sbjct: 61 YTRRYKAENGQQGMGSDMTGRKGKDTTLTVPVGTTVIDVDTDEILVDLREHGQTFKVAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP + PG G+ + + +LK++AD+G++GLPNAGKST + SV+ Sbjct: 121 GVRGLGNTRFKSSTNRAPRQSTPGKEGESRNLKFELKVLADVGLLGLPNAGKSTLIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTT+ PNLG+V+ + + F++ADIPG+I+ A GAG+G RFLKH RT V Sbjct: 181 AAKPKVADYPFTTMVPNLGVVRVDELRSFVMADIPGLIEGASDGAGLGIRFLKHLVRTRV 240 Query: 240 LLHIVSA--LEENVQAAYQ-CILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH+V +E+ A I EL A++ L ++ + L+++D V Sbjct: 241 LLHLVDMFPFDESTPAENALAIAKELEAFSPTLAQRERWLVLNKMDMV 288 >gi|91786739|ref|YP_547691.1| GTPase ObgE [Polaromonas sp. JS666] gi|123356059|sp|Q12F99|OBG_POLSJ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|91695964|gb|ABE42793.1| GTP1/OBG subdomain [Polaromonas sp. JS666] Length = 361 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 150/338 (44%), Positives = 235/338 (69%), Gaps = 9/338 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + I +GDGG+G +SF EK+ EFGGP+GG GGRGG V+ A NLNTL+DFR Sbjct: 1 MKFVDEAFIDIAAGDGGSGCVSFSHEKYKEFGGPNGGDGGRGGHVYAVADVNLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + +A++G+ GM + GAKG+D++L +PVGT + + + ++ +L G+++++A G Sbjct: 61 FSRRHEARNGQHGMGSDMFGAKGDDIILKMPVGTILTDAETGEVLFELLVPGEQVLIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKSSTN+AP PG G+ K + L+LK++AD+G++G+PNAGKSTF+++V+ Sbjct: 121 GDGGFGNLRFKSSTNRAPRSKTPGWPGERKNLKLELKVLADVGLLGMPNAGKSTFISAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P+IADYPFTTL+PNLG+V+ G ++ F++AD+PG+I+ A +GAG+G FL+H +RT + Sbjct: 181 NARPRIADYPFTTLHPNLGVVRVGPEQSFVVADLPGLIEGASEGAGLGHLFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV + +E V Q I+ EL Y+ L +K + L+++D VD+D A + Sbjct: 241 LLHIVDLAPFDEGVDPVAQAKAIVRELKKYDEALYEKPRWLVLNKLDMVDADKRAAIVKD 300 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKIFSIR 330 + G V FE S++T G +++ ++ + ++ Sbjct: 301 FVKRFKFKGPV-FEISALTREGCEHLIKTIYQHVKQVQ 337 >gi|254796803|ref|YP_003081640.1| GTP-binding protein Obg/CgtA [Neorickettsia risticii str. Illinois] gi|254590031|gb|ACT69393.1| GTP-binding protein Obg/CgtA [Neorickettsia risticii str. Illinois] Length = 341 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 144/305 (47%), Positives = 206/305 (67%), Gaps = 1/305 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE K+++++G+GG G SFRREKF+EFGGPDGG GG GG+V NLNTL+D+R Sbjct: 1 MKFIDEVKIFLKAGNGGDGCSSFRREKFVEFGGPDGGCGGDGGNVIFITDENLNTLLDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ H KA++G+ G K N+ G G D+V VP+GTQ+ +DG+ L+ DL+Q Q I A G Sbjct: 61 HRVHLKAENGKPGRKSNKRGESGSDLVCKVPIGTQILTQDGV-LLSDLEQPKQSFISAFG 119 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FK+S N+A G G+EK + L LK++ADIG++GLPNAGKSTFL+ + Sbjct: 120 GKGGRGNATFKNSLNRAATEFTYGEPGEEKTVILNLKILADIGLVGLPNAGKSTFLSRCS 179 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPF+TL P +GI K E ++ADIPGII+ AH+ G+G +FLKH ER L Sbjct: 180 NAKPKIADYPFSTLEPIVGIAKINNHEIVVADIPGIIQGAHKNLGLGFKFLKHIERCKAL 239 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 ++++ E+++ + Y + +ELS Y+ L K V +++ D + D + K + + Sbjct: 240 IYLIDGTEKDIYSVYTLLSNELSLYSKNLETKEHFVLITKSDLLGKDEVQEKCQYIQERT 299 Query: 301 GQVPF 305 G++ Sbjct: 300 GKLTL 304 >gi|188996794|ref|YP_001931045.1| GTP-binding protein Obg/CgtA [Sulfurihydrogenibium sp. YO3AOP1] gi|261277717|sp|B2V968|OBG_SULSY RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|188931861|gb|ACD66491.1| GTP-binding protein Obg/CgtA [Sulfurihydrogenibium sp. YO3AOP1] Length = 346 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 147/326 (45%), Positives = 221/326 (67%), Gaps = 4/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK+Y+++GDGG G ++F REK++ FGGP GG GG+GGD+ + A S+L TL+DF+Y+ Sbjct: 2 FIDKAKIYVKAGDGGNGCVAFLREKYVPFGGPAGGDGGKGGDIILIADSSLQTLMDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KA+ G+ G N+ G GED++L VP+GT V + + +I DL ++GQ +++A GG Sbjct: 62 RHYKAERGQHGQGGNKKGKDGEDLILKVPIGTVVKDAETGEIIADLVKKGQSVVVAKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA FKS TNQAP A G LG+E+ I L+LKL+AD+GIIG PNAGKST ++ +++A Sbjct: 122 GGRGNAAFKSPTNQAPMVAEKGELGEERWIELELKLLADVGIIGFPNAGKSTLISILSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADYPFTTL P LG+++ ++I LADIPG+I+ A +G G+G FL+H ERT L+ Sbjct: 182 RPKIADYPFTTLTPVLGVLQLDVNDYIVLADIPGLIEGASEGLGLGHEFLRHIERTKFLI 241 Query: 242 HIVSA---LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ E + A+ I EL Y+ +L KK +IV ++ID + +L + + Sbjct: 242 HLIDVSDFRERDPIDAFNIINKELEKYSPDLIKKPQIVVANKIDALSDKSLLDNLEKYFS 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHD 324 + G S IT I +++ + + Sbjct: 302 ERGYPFVAVSLITRENIDKLINLIRE 327 >gi|53803713|ref|YP_114666.1| GTPase ObgE [Methylococcus capsulatus str. Bath] gi|81681454|sp|Q605N2|OBG_METCA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|53757474|gb|AAU91765.1| GTP-binding protein, GTP1/Obg family [Methylococcus capsulatus str. Bath] Length = 345 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 151/325 (46%), Positives = 215/325 (66%), Gaps = 7/325 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G ISFRREK+I FGGPDGG GG GG V++ A+ NLNTL DFR Sbjct: 1 MKFVDEAEIRVDAGDGGNGCISFRREKYIPFGGPDGGDGGDGGSVYLVASDNLNTLADFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + HF+AQ GE G N +G GED + VP GT V + D + DL + G R+++A G Sbjct: 61 FHSHFRAQRGENGSGNNCTGKSGEDCFIHVPTGTIVTDADTGEHMGDLTRSGDRLLVARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSSTN+AP A PG G+ + + L+LKLIAD+G++G+PNAGKS+ + +V+ Sbjct: 121 GFHGIGNARFKSSTNRAPRRATPGTPGERRTLHLELKLIADVGLLGMPNAGKSSLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL+PNLG+V+ G + F++ADIPG+I+ A +GAG+G +FLKH RT + Sbjct: 181 AARPKVADYPFTTLHPNLGVVRVGDQRSFVMADIPGLIEGAAEGAGLGVQFLKHLTRTRL 240 Query: 240 LLHIVSALEE----NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V N A + ++ EL + L +K + L++ID + + L + E Sbjct: 241 LLHVVDIDPYETGINPVTAARKVIAELCKWGHGLEEKPRWLVLNKIDRLAPELLESRCRE 300 Query: 296 L--ATQCGQVPFEFSSITGHGIPQI 318 + + S+I G G+ ++ Sbjct: 301 IIDGLHWTDPVYRISAIQGEGLDRL 325 >gi|242278328|ref|YP_002990457.1| GTPase ObgE [Desulfovibrio salexigens DSM 2638] gi|242121222|gb|ACS78918.1| GTP-binding protein Obg/CgtA [Desulfovibrio salexigens DSM 2638] Length = 352 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 152/342 (44%), Positives = 234/342 (68%), Gaps = 9/342 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +RSG GG G ++FRRE+FI GGP GG GG+GGD+ + +S L TL DFR Sbjct: 1 MKFIDEATITVRSGKGGNGCVAFRRERFIPKGGPSGGDGGKGGDLIFRGSSKLLTLYDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE---EDGIS-LICDLDQEGQRII 116 ++ ++A++GE+G R++ G +D+++ +P+GT V+E EDG LI DL EG+ ++ Sbjct: 61 LKRVYEARNGEQGQGRDKYGKGADDLIIDLPLGTLVYEVNTEDGSEKLIADLTVEGREMV 120 Query: 117 LAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFL 176 + GG+GG GN HFKSSTNQAP A G G+EK I L+LK+IAD+G++GLPNAGKSTF+ Sbjct: 121 ICKGGDGGRGNIHFKSSTNQAPRQAEEGFPGEEKRIRLQLKIIADVGLLGLPNAGKSTFI 180 Query: 177 ASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTE 235 + ++ AKPKIA YPFTTL PNLG+V + + ++ADIPG+I+ A +G G+G RFLKH E Sbjct: 181 SKISAAKPKIAAYPFTTLVPNLGVVDDDMGNKLVIADIPGLIEGASEGHGLGHRFLKHVE 240 Query: 236 RTHVLLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 RT L+HI+SA + +++A ++ + +EL ++ E+ K ++ +++ID + + L Sbjct: 241 RTRFLVHILSAEDLSLEAPFEGFNMLDEELRIFDEEMANKTQLRVINKIDLLSEEDLEAI 300 Query: 293 KNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 K + A + G + S++ G+ ++L + D+ ++ E E Sbjct: 301 KGK-AEEAGIKIYFISALHSDGVQELLSDMWDRFKAMNQEEE 341 >gi|319761644|ref|YP_004125581.1| gtp-binding protein obg/cgta [Alicycliphilus denitrificans BC] gi|317116205|gb|ADU98693.1| GTP-binding protein Obg/CgtA [Alicycliphilus denitrificans BC] Length = 357 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 150/334 (44%), Positives = 230/334 (68%), Gaps = 9/334 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFR EK+ EFGGP+GG GGRGG V+ A NLNTL+DFR Sbjct: 1 MKFVDEAFIDVAAGDGGNGCVSFRHEKYKEFGGPNGGDGGRGGHVFAVADPNLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A+ GE GM + GA G D+ L +PVGT + + + L+ +L G+ + +A G Sbjct: 61 YSRRHEAKRGEHGMGSDMFGAAGSDITLKMPVGTIISDANTGELLYELLTPGEVVTIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKS+ N+AP PG G+ K + L+LK++AD+G++G+PNAGKSTF+A+V+ Sbjct: 121 GDGGFGNLRFKSAINRAPRQKTPGWPGERKSLKLELKVLADVGLLGMPNAGKSTFIAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G ++ F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVGPEQSFVVADIPGLIEGASEGAGLGHQFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E+V Q I+ EL Y+++L +K + L+++D V ++ A + + Sbjct: 241 LLHVVDMAPFDESVDPVAQAKAIVAELKKYDTQLYEKPRWLVLNKLDMVPAEERAARVKD 300 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKI 326 + G V FE S++T G +++ ++ + Sbjct: 301 FVKRFKWKGPV-FEISALTREGCEPLVKAIYQHV 333 >gi|170723656|ref|YP_001751344.1| GTPase ObgE [Pseudomonas putida W619] gi|261277687|sp|B1JF57|OBG_PSEPW RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|169761659|gb|ACA74975.1| GTP-binding protein Obg/CgtA [Pseudomonas putida W619] Length = 408 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 154/329 (46%), Positives = 219/329 (66%), Gaps = 8/329 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +++GDGG G +SFRREKFIE GGP+GG GG GG V++ A NLNTL+D+R Sbjct: 1 MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSVYMVADENLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +H +AQ G G + +G KGED+ L VPVGT V + +I DL GQ++++A G Sbjct: 61 YTRHHEAQRGANGGSTDCTGKKGEDLFLRVPVGTTVIDASTQEVIGDLVTPGQKLMVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G ++ + ++LK++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGDQRDLKMELKVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A GAG+G RFLKH RT V Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVDRWKSFVIADIPGLIEGASDGAGLGIRFLKHLARTRV 240 Query: 240 LLHIV--SALEENVQA-AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V + L+ + A A + I++EL+ ++ L + + L++ D + D + E+ Sbjct: 241 LLHLVDLAPLDGSSPADAAEVIINELTRFSPSLTDRERWLVLNKADMLMDDERDERVKEV 300 Query: 297 ATQC---GQVPFEFSSITGHGIPQILECL 322 + G V + S+I G Q+ L Sbjct: 301 VERLQWEGPV-YVISAIAKQGTEQLTHDL 328 >gi|307731049|ref|YP_003908273.1| GTP-binding protein Obg/CgtA [Burkholderia sp. CCGE1003] gi|307585584|gb|ADN58982.1| GTP-binding protein Obg/CgtA [Burkholderia sp. CCGE1003] Length = 373 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 154/333 (46%), Positives = 223/333 (66%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVIAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A++GE G + G G+D+ L +PVGT + + + LI DL + Q + +A G Sbjct: 61 YAKKHQARNGENGRGSDCYGKGGDDITLRMPVGTTITDMETGELIADLTEHNQSVQIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMVRLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G + F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPSRSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV + +E+V A + I++EL Y+ L +K + L+++D V D + + Sbjct: 241 LLHIVDLAPFDESVDPVAEAKAIVNELRKYDELLYQKPRWLVLNKLDMVPEDEREARVSA 300 Query: 296 LATQCGQ--VPFEFSSITGHGIPQILECLHDKI 326 G FE S++TG G + ++D I Sbjct: 301 FLEGFGWDGPVFEISALTGQGCESLCYAVYDYI 333 >gi|220932246|ref|YP_002509154.1| GTP-binding protein Obg/CgtA [Halothermothrix orenii H 168] gi|261266828|sp|B8CXZ0|OBG_HALOH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|219993556|gb|ACL70159.1| GTP-binding protein Obg/CgtA [Halothermothrix orenii H 168] Length = 426 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 148/321 (46%), Positives = 213/321 (66%), Gaps = 4/321 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE ++ ++ G GG G +SFRREKF GGPDGG GG GG+V ++ LNTL DFRYQ Sbjct: 2 FVDEVEIKVKGGQGGNGVVSFRREKFEPMGGPDGGDGGDGGNVILRVDEGLNTLADFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H++A+ G G +N+ G GED+VL VP GT V++ D L+ DL ++G+ I+A GG Sbjct: 62 RHYEAERGYHGSGKNKHGRSGEDLVLKVPPGTVVYDADTDELLADLTEDGEEYIVAHGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA FK ST +AP +A G G+E+ I L+LKL+AD+G+IG PN GKST ++ V+ A Sbjct: 122 GGRGNARFKKSTRKAPRFAEKGEPGEERSIRLELKLVADVGLIGFPNVGKSTLISVVSEA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V YK F++ADIPG+I+ AHQG G+GD FL+H ERT +L+ Sbjct: 182 RPKIANYHFTTLKPNLGVVALSEYKSFVMADIPGLIEGAHQGVGLGDEFLRHIERTRLLI 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 HI +S +E + ++ I EL +N +L + +IV L++ID + + + Sbjct: 242 HIIDISGIEGRDPLEDFKTINRELEKFNEKLSSRPQIVALNKIDLPGARENVERVQPVLE 301 Query: 299 QCGQVPFEFSSITGHGIPQIL 319 + G F S+ T G+ +++ Sbjct: 302 EKGYKVFPISAATKEGVKELI 322 >gi|312622639|ref|YP_004024252.1| GTP-binding protein obg/cgta [Caldicellulosiruptor kronotskyensis 2002] gi|312203106|gb|ADQ46433.1| GTP-binding protein Obg/CgtA [Caldicellulosiruptor kronotskyensis 2002] Length = 440 Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 154/328 (46%), Positives = 222/328 (67%), Gaps = 8/328 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+Y+++GDGG G ++FRREK++ GGP GG GG+GGDV A LNTL+DF+Y+ Sbjct: 15 FVDIAKIYVKAGDGGDGIVAFRREKYVPAGGPAGGDGGKGGDVIFVADRELNTLLDFKYK 74 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KAQ+GE+G N G GED+++ VPVGT + + + +I DL +EG R I+A GG Sbjct: 75 RHYKAQNGERGGPNNMHGKDGEDLIIKVPVGTVIKDAETGEIIADLSREGDRAIVAHGGR 134 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHF ++T Q P +A G G E + L+LK++AD+G+IG PN GKSTFL+ T A Sbjct: 135 GGRGNAHFATATRQTPRFAEVGEKGDELWVILELKVLADVGLIGYPNVGKSTFLSVATNA 194 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +P+IA+YPFTT YPNLGIV EG + F+LADIPG+I+ A +GAG+G +FL+H ERT VL Sbjct: 195 RPEIANYPFTTKYPNLGIVYISEG-ESFVLADIPGLIEGASEGAGLGHQFLRHVERTKVL 253 Query: 241 LHIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 +HIV S E V+ + I +EL Y+ +L +K +IV +++D D+ E Sbjct: 254 IHIVDVSGSEGREPVE-DFIKINEELKKYSPDLAQKPQIVAANKMDLPDAQAYFELFKEE 312 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHD 324 + G + S+ TG G+ ++L+ ++ Sbjct: 313 IEKMGYEVYPISAATGMGVREVLKRAYE 340 >gi|52425649|ref|YP_088786.1| GTPase ObgE [Mannheimia succiniciproducens MBEL55E] gi|81609458|sp|Q65S59|OBG_MANSM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|52307701|gb|AAU38201.1| Obg protein [Mannheimia succiniciproducens MBEL55E] Length = 390 Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 151/332 (45%), Positives = 226/332 (68%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + I +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRIEAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F A+ GE G N +G +G+D+ L VPVGT+ + D +I DL + G ++++A G Sbjct: 61 FEKRFAAERGENGRSSNCTGHRGKDITLRVPVGTRAIDNDTKEIIGDLTKNGAKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLQLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+ + + + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVARVDANRSFVVADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIV--SALEENVQAAYQCILD-ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V + ++E+ A I++ EL Y+ +L K + ++IDT+ + A++ ++ Sbjct: 241 LIHLVDIAPIDESDPADNIGIIESELFQYSEKLADKPRWLVFNKIDTISDEEAAKRAKDI 300 Query: 297 ATQCG--QVPFEFSSITGHGIPQILECLHDKI 326 + G + + S+ TG IPQ++ + D I Sbjct: 301 TERLGWEEDYYLISAATGKNIPQLIRDIMDFI 332 >gi|284039939|ref|YP_003389869.1| GTP-binding protein Obg/CgtA [Spirosoma linguale DSM 74] gi|283819232|gb|ADB41070.1| GTP-binding protein Obg/CgtA [Spirosoma linguale DSM 74] Length = 334 Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 147/322 (45%), Positives = 217/322 (67%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ RSG GGAG + FRREK GGPDGG GGRGG + ++ + L TL+ +Y+ Sbjct: 6 FIDYVKINCRSGAGGAGSVHFRREKHTPKGGPDGGDGGRGGHIILRGNAQLWTLLHLKYR 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA +G G RSGA+GEDV+L VP+GT + + + ++ ++GQ IIL GG Sbjct: 66 KHVKAGNGVAGEGGRRSGAQGEDVILDVPLGTIARDPETGQQVAEITEDGQEIILFAGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKS+T QAP YA PG G+E+ + L+LKL+AD+G++G PNAGKST L+ ++ A Sbjct: 126 GGMGNDHFKSATQQAPEYAQPGEPGREEWVVLELKLLADVGLVGFPNAGKSTLLSVLSAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IADYPFTTL PNLG+V YK F++ADIPGII+ A QG G+G RFL+H ER +LL Sbjct: 186 RPEIADYPFTTLVPNLGVVAYRDYKSFVMADIPGIIEGASQGKGLGLRFLRHIERNSILL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A EN++ Y +L+EL +N EL K ++ ++++D VD +T + +L Sbjct: 246 FLIPATSENIRQEYNTLLNELREFNPELMDKTRMLAITKMDLVDDETRQILQADLPK--- 302 Query: 302 QVPFEF-SSITGHGIPQILECL 322 ++P + S+++ G+ ++ + + Sbjct: 303 KIPVAYISAVSQQGLDELKDII 324 >gi|221068966|ref|ZP_03545071.1| GTP-binding protein Obg/CgtA [Comamonas testosteroni KF-1] gi|220713989|gb|EED69357.1| GTP-binding protein Obg/CgtA [Comamonas testosteroni KF-1] Length = 371 Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 157/346 (45%), Positives = 233/346 (67%), Gaps = 13/346 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + I +GDGG G +SFR EK+ EFGGPDGG GGRGG V+ A NLNTL+D+R Sbjct: 1 MKFVDEAFIDIAAGDGGNGCVSFRHEKYKEFGGPDGGDGGRGGHVYAVADVNLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A+ G+ GM + GA G+D+ L +PVGT + + D ++ +L + GQ I +A G Sbjct: 61 YSRRHEAKRGQHGMGSDMFGAAGDDITLNMPVGTIISDADTGEVLFELLEPGQVITIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKS+ N+AP PG G+ + + L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GDGGFGNLRFKSAINRAPRQKTPGYPGERRNLKLELKVLADVGLLGMPNAGKSTFITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ ++ F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVAAEQSFVVADIPGLIEGASEGAGLGHQFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV + +E V Q I+ EL Y++EL K + L+++D V ++ A K + Sbjct: 241 LLHIVDIAPFDEGVDPVEQARAIVAELKKYDAELYDKPRWLVLNKLDMVPAEERAAKVKD 300 Query: 296 LATQC---GQVPFEFSSITGHG----IPQILECLHDKIFSIRGENE 334 + G V FE S++T G I +I E +H++ + + E Sbjct: 301 FVKRFKWKGPV-FEISALTREGCEPLIRKIFEHVHNQQLAEQAPKE 345 >gi|148358616|ref|YP_001249823.1| GTP1/Obg family transporter GTP-binding protein [Legionella pneumophila str. Corby] gi|296108294|ref|YP_003619995.1| Predicted GTPase [Legionella pneumophila 2300/99 Alcoy] gi|261266848|sp|A5IAS7|OBG_LEGPC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|148280389|gb|ABQ54477.1| GTP-binding protein, GTP1/Obg family [Legionella pneumophila str. Corby] gi|295650196|gb|ADG26043.1| Predicted GTPase [Legionella pneumophila 2300/99 Alcoy] Length = 341 Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 142/288 (49%), Positives = 204/288 (70%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G +SFRREKFI GGPDGG GG GG ++ +A+S+LNTLIDFR Sbjct: 1 MKFVDEALIKVEAGKGGNGCLSFRREKFIPRGGPDGGDGGDGGSIYFEASSDLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +KA++G+ GM N +G KGED+ + VPVGT V++ D L+ D+ Q G +++A G Sbjct: 61 YTRQYKAENGQSGMGGNCTGKKGEDLTIKVPVGTMVYDADTGELLADISQPGVPVLIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN +KSS N++P PG G+ + + L+L+++AD+G++GLPNAGKST + +V+ Sbjct: 121 GFHGLGNTRYKSSVNRSPRQTTPGSSGESRNLRLELRVLADVGLLGLPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +K K+ADYPFTTL+P LG+V+ YK F++ADIPG+I+ A QGAG+G RFLKH RT V Sbjct: 181 SSKAKVADYPFTTLHPGLGVVRVSPYKSFVMADIPGLIEGAAQGAGLGHRFLKHLSRTCV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH++ + A + IL+EL+ YN +L K + L++ID + Sbjct: 241 LLHVIDIAPLDGSDPVADAKAILNELTQYNPDLLNKPRWLVLNKIDML 288 >gi|307611524|emb|CBX01201.1| hypothetical protein LPW_29001 [Legionella pneumophila 130b] Length = 341 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 142/288 (49%), Positives = 204/288 (70%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G +SFRREKFI GGPDGG GG GG ++ +A+S+LNTLIDFR Sbjct: 1 MKFVDEALIKVEAGKGGNGCLSFRREKFIPRGGPDGGDGGDGGSIYFEASSDLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +KA++G+ GM N +G KGED+ + VPVGT V++ D L+ D+ Q G +++A G Sbjct: 61 YTRQYKAENGQSGMGGNCTGKKGEDLTIKVPVGTMVYDADTGELLADISQPGVPVLIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN +KSS N++P PG G+ + + L+L+++AD+G++GLPNAGKST + +V+ Sbjct: 121 GFHGLGNTRYKSSVNRSPRQTTPGSPGESRNLRLELRVLADVGLLGLPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +K K+ADYPFTTL+P LG+V+ YK F++ADIPG+I+ A QGAG+G RFLKH RT V Sbjct: 181 SSKAKVADYPFTTLHPGLGVVRVSPYKSFVMADIPGLIEGAAQGAGLGHRFLKHLSRTCV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH++ + A + IL+EL+ YN +L K + L++ID + Sbjct: 241 LLHVIDIAPLDGSDPVADAKAILNELTQYNPDLLNKPRWLVLNKIDML 288 >gi|50085638|ref|YP_047148.1| GTPase ObgE [Acinetobacter sp. ADP1] gi|81613112|sp|Q6F9D8|OBG_ACIAD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|49531614|emb|CAG69326.1| putative GTP-binding protein (Obg) [Acinetobacter sp. ADP1] Length = 400 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 153/334 (45%), Positives = 225/334 (67%), Gaps = 10/334 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + + +GDGG G SFRREKF+ FGGPDGG GGRGG V+IQA + TL+D+R Sbjct: 1 MRFVDEAVITVEAGDGGNGVASFRREKFVPFGGPDGGDGGRGGSVYIQADDDTGTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+A+ G+ G N +G GEDVVL VPVGT + + + +I DL ++GQR+++A G Sbjct: 61 YTRKFRAERGKNGAGANCTGRGGEDVVLKVPVGTTIVDVESGDIIGDLVEDGQRVMVATG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSSTN++P G+ G+ + I L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GDGGLGNTHFKSSTNRSPRKFTTGVKGEFREIRLELKVLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTT+ PNLG+V + ++ F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTMVPNLGVVDADRHRSFVMADIPGLIEGAAEGAGLGIRFLKHLARTRI 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV + V A + I+ EL ++ L + ++ L+++D +D Sbjct: 241 LLHIVDVQPIDGSDPVHNA-KAIVGELKKFSPTLAELPVVLVLNKLDQIDEANREEWCQH 299 Query: 296 LATQ---CGQVPFEFSSITGHGIPQILECLHDKI 326 + T+ G V F S + G +++ L D+I Sbjct: 300 ILTELEWTGPV-FRTSGLLLEGTKEVVYYLMDQI 332 >gi|330823515|ref|YP_004386818.1| GTPase obg [Alicycliphilus denitrificans K601] gi|329308887|gb|AEB83302.1| GTPase obg [Alicycliphilus denitrificans K601] Length = 357 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 150/334 (44%), Positives = 230/334 (68%), Gaps = 9/334 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFR EK+ EFGGP+GG GGRGG V+ A NLNTL+DFR Sbjct: 1 MKFVDEAFIDVAAGDGGNGCVSFRHEKYKEFGGPNGGDGGRGGHVFAVADPNLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A+ GE GM + GA G D+ L +PVGT + + + L+ +L G+ + +A G Sbjct: 61 YSRRHEAKRGEHGMGSDMFGAAGSDITLKMPVGTIISDANTGELLYELLTPGEVVTIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKS+ N+AP PG G+ K + L+LK++AD+G++G+PNAGKSTF+A+V+ Sbjct: 121 GDGGFGNLRFKSAINRAPRQKTPGWPGERKSLKLELKVLADVGLLGMPNAGKSTFIAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G ++ F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVGPEQSFVVADIPGLIEGASEGAGLGHQFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E+V Q I+ EL Y+++L +K + L+++D V ++ A + + Sbjct: 241 LLHVVDMAPFDESVDPVAQAKAIVVELKKYDTQLYEKPRWLVLNKLDMVPAEERAARVKD 300 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKI 326 + G V FE S++T G +++ ++ + Sbjct: 301 FVKRFKWKGPV-FEISALTREGCEPLVKAIYQHV 333 >gi|326793610|ref|YP_004311430.1| GTPase obg [Marinomonas mediterranea MMB-1] gi|326544374|gb|ADZ89594.1| GTPase obg [Marinomonas mediterranea MMB-1] Length = 397 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 157/329 (47%), Positives = 221/329 (67%), Gaps = 9/329 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA +Y+R+G GG G +SF REKF+ GGPDGG GG GG V ++A +LNTLID+R Sbjct: 1 MKFVDEATIYVRAGKGGNGCLSFWREKFVAKGGPDGGDGGDGGSVLLEADESLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + + +++GE G R+ +G KGED+VL VPVGT + +ED + DL Q GQR+ +A G Sbjct: 61 YTKKYLSENGEGGQGRDMTGKKGEDLVLKVPVGTTIIDEDTGETLGDLTQVGQRLKVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP G G+E+ + L++K++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GRHGLGNTRFKSSTNRAPRQTTKGTPGEERNLKLEMKVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+VK + ++ F++ADIPGII+ A GAG+G RFLKH R + Sbjct: 181 SAKPKVADYPFTTLVPNLGVVKVKKHQSFVVADIPGIIEGAADGAGLGIRFLKHLVRNRI 240 Query: 240 LLHIVS-ALEENVQAAYQCIL--DELSAYNSEL-RKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV A + V A ++ +EL ++ L K+ + L++ID V D + + Sbjct: 241 LLHIVDMAPWDEVTPAEAAVIAVNELENFSPTLAEKRDRWLILNKIDMVPEDEVEERCQS 300 Query: 296 L--ATQCGQVPFEFSSITGHGIPQILECL 322 + A + + S+I+G G + CL Sbjct: 301 VIDALEWEGKVYRISAISGAGTEPL--CL 327 >gi|71066059|ref|YP_264786.1| GTPase ObgE [Psychrobacter arcticus 273-4] gi|123648301|sp|Q4FRK6|OBG_PSYA2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|71039044|gb|AAZ19352.1| putative GTP-binding protein, GTP1/Obg family [Psychrobacter arcticus 273-4] Length = 405 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 152/325 (46%), Positives = 218/325 (67%), Gaps = 8/325 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA V +++GDGG G SFRREK++ GGPDGG GG+GGDV++ A N NTL+D+R Sbjct: 1 MRFIDEAVVTVKAGDGGNGIASFRREKYVPRGGPDGGDGGKGGDVYVIAEDNTNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A E G RN SG +D+ L VP+GT + + + ++ DL + GQ +++A G Sbjct: 61 YTRRHDAMRAENGHSRNCSGKGSDDLFLPVPIGTTIVDTETDEVLGDLIEIGQTLLIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSSTNQAP A G G+ K++ +LK++AD+G+IGLPNAGKSTF+ V+ Sbjct: 121 GDGGLGNTHFKSSTNQAPRKATSGFEGELKVLKFELKVVADVGLIGLPNAGKSTFIRQVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V G ++ F++ADIPG+I+ A +GAG+G RFLKH RT Sbjct: 181 AARPKVADYPFTTLVPNLGVVDIGRHRSFVMADIPGLIEGASEGAGLGIRFLKHVARTRR 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + V+ A + IL+EL ++ EL +I+ L++ID V + L Sbjct: 241 LLHLVDIKPIDGSDPVENA-RIILNELDRFSPELANLPQILVLNKIDQVPEEELNELCTH 299 Query: 296 LATQCGQ--VPFEFSSITGHGIPQI 318 + + G + F +++TG G+ I Sbjct: 300 IVAELGWTGIVFRTATLTGEGVDAI 324 >gi|54298638|ref|YP_125007.1| GTPase ObgE [Legionella pneumophila str. Paris] gi|81822505|sp|Q5X1P1|OBG_LEGPA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|53752423|emb|CAH13855.1| hypothetical protein lpp2702 [Legionella pneumophila str. Paris] Length = 341 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 142/288 (49%), Positives = 204/288 (70%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G +SFRREKFI GGPDGG GG GG ++ +A+S+LNTLIDFR Sbjct: 1 MKFVDEALIKVEAGKGGNGCLSFRREKFIPRGGPDGGDGGDGGSIYFEASSDLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +KA++G+ GM N +G KGED+ + VPVGT V++ D L+ D+ Q G +++A G Sbjct: 61 YTRQYKAENGQSGMGGNCTGKKGEDLTIKVPVGTMVYDADTGELLADISQPGVPVLIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN +KSS N++P PG G+ + + L+L+++AD+G++GLPNAGKST + +V+ Sbjct: 121 GFHGLGNTRYKSSVNRSPRQTTPGSPGESRNLRLELRVLADVGLLGLPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +K K+ADYPFTTL+P LG+V+ YK F++ADIPG+I+ A QGAG+G RFLKH RT V Sbjct: 181 SSKAKVADYPFTTLHPGLGVVRVSPYKSFVMADIPGLIEGAAQGAGLGHRFLKHLSRTCV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH++ + A + IL+EL+ YN +L K + L++ID + Sbjct: 241 LLHVIDIAPLDGSDPVADAKAILNELTQYNPDLLNKPRWLVLNKIDML 288 >gi|170695312|ref|ZP_02886458.1| GTP-binding protein Obg/CgtA [Burkholderia graminis C4D1M] gi|170139712|gb|EDT07894.1| GTP-binding protein Obg/CgtA [Burkholderia graminis C4D1M] Length = 373 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 154/333 (46%), Positives = 222/333 (66%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVIAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+D+ L +PVGT + + + LI DL + Q + +A G Sbjct: 61 YAKKHMARNGENGRGADCYGKGGDDITLRMPVGTTITDMETGELIADLTEHNQSVKIAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMVRLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G + F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPSRSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV + +E+V A + I++EL Y+ +L +K + L+++D V D + + Sbjct: 241 LLHIVDIAPFDESVDPVAEARAIVNELRKYDEQLYQKPRWLVLNKLDMVPEDEREARVSA 300 Query: 296 LATQCGQ--VPFEFSSITGHGIPQILECLHDKI 326 G FE S++TG G + + D I Sbjct: 301 FLEGFGWDGPVFEISALTGQGCESLCYAVFDYI 333 >gi|284929497|ref|YP_003422019.1| Obg family GTPase CgtA [cyanobacterium UCYN-A] gi|284809941|gb|ADB95638.1| Obg family GTPase CgtA [cyanobacterium UCYN-A] Length = 341 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 144/327 (44%), Positives = 219/327 (66%), Gaps = 9/327 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D A++ + G GG G ++FRREK++ GGP GG+GG+GG V++QA NL TL+DFR Sbjct: 1 MQFIDRAEIEVEGGKGGDGIVAFRREKYVPAGGPSGGNGGKGGSVYLQAAQNLQTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +FKA G +G N +GA G+D ++ VP G+ +++ + ++ DL + Q I +A G Sbjct: 61 YSHYFKADGGRRGGTNNCTGAAGKDNIIQVPCGSVIYDLETEEILGDLTIDKQIICIARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GGFGN HF S+ N++P +A PG+ G+ + + L+LKL+A++GIIGLPNAGKST ++S++ Sbjct: 121 GKGGFGNKHFLSNQNRSPEHALPGLEGEHRFLRLELKLLAEVGIIGLPNAGKSTLISSLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V++ + + ADIPG+I+ AH+G G+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLTPNLGVVRKTTGDGTVFADIPGLIEGAHEGIGLGYEFLRHIERTSL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS---DTLARKKNEL 296 LLH++ ++ YQ I DEL AY + + +I+ L++ D D D + +K N+L Sbjct: 241 LLHLIDITADDPLKNYQIIQDELKAYGKGISDRFQIIALNKADACDQNNIDAITKKMNKL 300 Query: 297 ATQCGQVP-FEFSSITGHGIPQILECL 322 P F S++T G ++L + Sbjct: 301 T----NAPIFNISAVTKAGTKELLHTI 323 >gi|209522094|ref|ZP_03270745.1| GTP-binding protein Obg/CgtA [Burkholderia sp. H160] gi|209497466|gb|EDZ97670.1| GTP-binding protein Obg/CgtA [Burkholderia sp. H160] Length = 373 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 156/333 (46%), Positives = 223/333 (66%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVIAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+D+ L +PVGT + + D LI DL + Q + +A G Sbjct: 61 YAKKHLARNGENGRGSDCYGKGGDDITLRMPVGTTITDMDTGELIADLTEHNQSVQIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMVRLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G + F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPSRSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKN 294 LLHIV + +E++ + I++EL Y+ EL +K + L+++D V + D AR Sbjct: 241 LLHIVDIAPFDESIDPVVEAKAIVNELRKYDEELYQKPRWLVLNKLDMVPEDDREARVAA 300 Query: 295 ELATQCGQVP-FEFSSITGHGIPQILECLHDKI 326 L P FE S++TG G + + D + Sbjct: 301 FLEGFGWDGPVFEISALTGQGCENLCYAVFDYL 333 >gi|262373059|ref|ZP_06066338.1| obg family GTPase CgtA [Acinetobacter junii SH205] gi|262313084|gb|EEY94169.1| obg family GTPase CgtA [Acinetobacter junii SH205] Length = 405 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 151/333 (45%), Positives = 225/333 (67%), Gaps = 8/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + + +GDGG G SFRREKF+ FGGPDGG GGRGG ++IQA + +TL+D+R Sbjct: 1 MRFVDEAVITVEAGDGGNGVASFRREKFVPFGGPDGGDGGRGGSIYIQADDDTSTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+A+ G+ G N SG GED++L VPVGT + + + +I DL +GQR+ +A G Sbjct: 61 YTRRFRAERGKNGSGANCSGRGGEDIILKVPVGTTIVDTESGDIIGDLVADGQRVKVANG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSSTN++P GI G+ + + L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GDGGLGNTHFKSSTNRSPRKCTHGIKGEYREVRLELKVLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTT+ PNLG+V + ++ F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTMVPNLGVVDADRHRSFVMADIPGLIEGAAEGAGLGIRFLKHLARTRI 240 Query: 240 LLHIVSALE-ENVQAAY--QCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHIV + AY + IL EL ++ L K ++ L+++D + ++ + Sbjct: 241 LLHIVDVQPIDGSDPAYNARAILAELEKFSPTLAKLPIVLVLNKLDQLPEESRDEWCQHI 300 Query: 297 ATQ---CGQVPFEFSSITGHGIPQILECLHDKI 326 + G V F+ S + G +++ L D+I Sbjct: 301 LDELQWTGPV-FKTSGLMAEGTKEVVYYLMDQI 332 >gi|51246442|ref|YP_066326.1| GTPase ObgE [Desulfotalea psychrophila LSv54] gi|81641375|sp|Q6AK07|OBG_DESPS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|50877479|emb|CAG37319.1| probable GTP-binding protein [Desulfotalea psychrophila LSv54] Length = 372 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 146/329 (44%), Positives = 221/329 (67%), Gaps = 4/329 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DEAK ++++GDGG G +SFRREKF+ GGP+GG GG+GGDV + A+S + +LIDFR Sbjct: 1 MAFVDEAKFFVKAGDGGNGCVSFRREKFVPKGGPNGGDGGKGGDVIMVASSKVQSLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+ HFKA+ G G R+ G G+D + +PVG+ V + + ++ DL +EG+ ++A G Sbjct: 61 YRSHFKAERGVHGQGRDMHGRGGKDCYMDIPVGSVVKDSETGRVLADLSEEGEEFVVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HF S +N+ P A G LG+EK + ++LKL+AD+G++GLPNAGKST L+ ++ Sbjct: 121 GSGGMGNPHFSSGSNRTPRVATKGKLGEEKWLLIELKLMADVGLVGLPNAGKSTLLSKLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTL P LG++ + I+ADIPG+++ AHQG G+G +FL+H ERT + Sbjct: 181 AANPKVADYPFTTLEPQLGMLHFPMRNSCIIADIPGLVEGAHQGVGLGHKFLRHVERTKI 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT--VDSDTLARKKNELA 297 L+H++ A ++ + Y I +EL +Y EL + +I+ L++ D D D L Sbjct: 241 LVHVIDASADDPFSDYDIIGNELRSYKEELADRAKILVLNKCDEFDFDKDLLPDFIEARG 300 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI 326 + V F S+ITG G+ ++++ + D I Sbjct: 301 LEPKNVLF-ISAITGEGVDKLVKLIGDII 328 >gi|119899459|ref|YP_934672.1| GTPase ObgE [Azoarcus sp. BH72] gi|261266665|sp|A1KAD0|OBG_AZOSB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|119671872|emb|CAL95786.1| probable GTP-binding protein [Azoarcus sp. BH72] Length = 408 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 151/338 (44%), Positives = 223/338 (65%), Gaps = 7/338 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF DEA++ + +GDGG G +FRREKFI GGPDGG GGRGG V+ A NLNTL+++R Sbjct: 1 MKFFDEARIEVVAGDGGNGAATFRREKFIPRGGPDGGDGGRGGSVYAVADRNLNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ GE G ++ G GED+ L PVGT + + D I DLD +G+R++LA G Sbjct: 61 FKRSFRAERGENGGSKDCYGKGGEDITLHFPVGTVISDLDSGEPIADLDVDGKRVLLAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP G G+ + + L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GRGGLGNLHFKSSVNRAPRKRTMGQEGERRNLHLELKVLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ DYPFTTL PNLG+V+ + + F++ADIPG+I+ A +GAG+G +FL+H +RTHV Sbjct: 181 AARPKVGDYPFTTLQPNLGVVRTDENRSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTHV 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + + V I++EL Y+ L K + L+++D ++ + A + Sbjct: 241 LLHLVDLAPFDPEVDPVRDALAIVEELRKYDESLYNKPRWLVLNKLDLLEPEDRAPRVAA 300 Query: 296 LATQCGQVP--FEFSSITGHGIPQILECLHDKIFSIRG 331 G+V FE S++ G G ++ L D + S R Sbjct: 301 FLEAYGEVERHFEISALQGEGCRGLIFALQDFLDSERA 338 >gi|88813010|ref|ZP_01128253.1| GTP1/OBG family protein [Nitrococcus mobilis Nb-231] gi|88789788|gb|EAR20912.1| GTP1/OBG family protein [Nitrococcus mobilis Nb-231] Length = 347 Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 149/321 (46%), Positives = 217/321 (67%), Gaps = 7/321 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +R+GDGG G +SFRREKFI GGPDGG GGRGG V+++AT LNTL DFR Sbjct: 1 MKFIDEATIQVRAGDGGDGCVSFRREKFIPRGGPDGGDGGRGGSVYLEATEGLNTLADFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A GE G R SG G D+++ VPVGT V E+ + DL + QR+++A G Sbjct: 61 HTRRFVAAAGEAGKGRQMSGRGGADLMVRVPVGTLVTAEETGECLGDLIRAEQRLLVARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFK +TN+AP A G G+ + L+LK++AD+G++G+PNAGKST L +++ Sbjct: 121 GRGGLGNCHFKRATNRAPRRATAGTPGEHLALRLELKVLADVGLLGMPNAGKSTLLRAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P++ADYPFTTLYPNLG+V+ E + F++ADIPG+I+ A QGAG+G RFLKH RT + Sbjct: 181 AARPRVADYPFTTLYPNLGVVRVEPTRSFVVADIPGLIRGAAQGAGLGTRFLKHLARTRL 240 Query: 240 LLHIV--SALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + + ++V +A + + EL ++ EL ++ + L+++D + + + Sbjct: 241 LLHVVDMARIRQDVDSAEDVRVLEQELDRFSGELARRERWLVLNKLDQIPAAEHQSLQQR 300 Query: 296 LATQCG--QVPFEFSSITGHG 314 + + G + F S+ TG G Sbjct: 301 MLQRLGWDRPVFGISAKTGEG 321 >gi|110833315|ref|YP_692174.1| GTPase ObgE [Alcanivorax borkumensis SK2] gi|123149708|sp|Q0VSE6|OBG_ALCBS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|110646426|emb|CAL15902.1| GTP-binding protein, GTP1/Obg family [Alcanivorax borkumensis SK2] Length = 391 Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 148/332 (44%), Positives = 223/332 (67%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + + +G GG G +SFRREK++EFGGPDGG GG GG V++QA +N+NTL+D+R Sbjct: 1 MQFVDEATIDVHAGKGGDGCLSFRREKYVEFGGPDGGDGGAGGHVFVQADTNINTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + FKA++GE G R +G ED++L VPVGT V + D ++ DL + +++A Sbjct: 61 YDRIFKARNGEPGKGRQMTGKSAEDIILYVPVGTTVVDLDTDEVLADLTDTDKPVMVAQA 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS NQAP G G+ + + L+LK++AD+G++G+PNAGKST + +++ Sbjct: 121 GRGGLGNIHFKSSVNQAPRKTTKGKPGESRRLRLELKVLADVGLLGMPNAGKSTLIRAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+VK + Y+ F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLIPNLGVVKADRYRSFVVADIPGLIEGAAEGAGLGIRFLKHLARTRL 240 Query: 240 LLHIV--SALEENVQAAY-QCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V + ++ + A + I DEL ++ L ++ + ++ID + D + + + Sbjct: 241 LLHVVDLAPMDGSSPANHIDAIADELDRFSPALAEQERWLVFNKIDLLADDEAQAQVDAI 300 Query: 297 ATQCG-QVP-FEFSSITGHGIPQILECLHDKI 326 + G Q P F+ S+ G G ++ L + I Sbjct: 301 VDELGWQGPVFKVSAAAGVGCEDLVYALMNAI 332 >gi|54295487|ref|YP_127902.1| GTPase ObgE [Legionella pneumophila str. Lens] gi|81822314|sp|Q5WTF1|OBG_LEGPL RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|53755319|emb|CAH16815.1| hypothetical protein lpl2574 [Legionella pneumophila str. Lens] Length = 341 Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 142/288 (49%), Positives = 204/288 (70%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G +SFRREKFI GGPDGG GG GG ++ +A+S+LNTLIDFR Sbjct: 1 MKFVDEALIKVEAGKGGNGCLSFRREKFIPRGGPDGGDGGDGGSIYFEASSDLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +KA++G+ GM N +G KGED+ + VPVGT V++ D L+ D+ Q G +++A G Sbjct: 61 YTRQYKAENGQSGMGGNCTGKKGEDLTIKVPVGTMVYDADTGELLADISQPGVPMLIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN +KSS N++P PG G+ + + L+L+++AD+G++GLPNAGKST + +V+ Sbjct: 121 GFHGLGNTRYKSSVNRSPRQTTPGSPGESRNLRLELRVLADVGLLGLPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +K K+ADYPFTTL+P LG+V+ YK F++ADIPG+I+ A QGAG+G RFLKH RT V Sbjct: 181 SSKAKVADYPFTTLHPGLGVVRVSPYKSFVMADIPGLIEGAAQGAGLGHRFLKHLSRTCV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH++ + A + IL+EL+ YN +L K + L++ID + Sbjct: 241 LLHVIDIAPLDGSDPVADAKAILNELTQYNPDLLNKPRWLVLNKIDML 288 >gi|254426878|ref|ZP_05040585.1| GTP-binding protein Obg/CgtA [Alcanivorax sp. DG881] gi|196193047|gb|EDX88006.1| GTP-binding protein Obg/CgtA [Alcanivorax sp. DG881] Length = 395 Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 148/332 (44%), Positives = 222/332 (66%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + + +G GG G +SFRREK++EFGGPDGG GG GG V++QA +N+NTL+D+R Sbjct: 1 MQFVDEATIDVHAGKGGDGCLSFRREKYVEFGGPDGGDGGAGGHVYVQADTNINTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + FKA++GE G R +G +DV+L VPVGT V + D ++ DL + +++A Sbjct: 61 YDRIFKARNGEPGKGRQMTGKSADDVILYVPVGTTVVDLDTEEVLADLTATDKPVMVAQA 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS NQAP G G+ + + L+LK++AD+G++G+PNAGKST + +++ Sbjct: 121 GRGGLGNIHFKSSVNQAPRKTTKGKPGESRRLRLELKVLADVGLLGMPNAGKSTLIRAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+VK + Y+ F++ADIPG+I+ A GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLIPNLGVVKADRYRSFVVADIPGLIEGAADGAGLGIRFLKHLARTRL 240 Query: 240 LLHIV--SALEENVQAAY-QCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V + ++ + A + I DEL ++ L ++ + ++ID + D + + + Sbjct: 241 LLHVVDLAPMDGSSPANHIDAIADELDRFSPALAEQERWLVFNKIDLMADDEAQEQADAI 300 Query: 297 ATQCG-QVP-FEFSSITGHGIPQILECLHDKI 326 + G Q P F+ S+ G G ++ L + I Sbjct: 301 VDELGWQGPVFKVSAAAGVGCDDLVYALMNAI 332 >gi|163858999|ref|YP_001633297.1| GTPase ObgE [Bordetella petrii DSM 12804] gi|261266683|sp|A9IFF9|OBG_BORPD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|163262727|emb|CAP45030.1| probable GTP-binding protein [Bordetella petrii] Length = 378 Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 154/336 (45%), Positives = 220/336 (65%), Gaps = 11/336 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G SFRREKFI GGPDGG GGRGG ++ A N+NTLIDFR Sbjct: 1 MKFVDEATIEVIAGKGGNGVASFRREKFIPKGGPDGGDGGRGGSIYAVADRNINTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A++GE G ++ GA D+ L VPVGT V + D L+ DL++ G+++ LA G Sbjct: 61 YARLHRAKNGENGRGSDQYGAAAPDITLRVPVGTVVHDADTGELLFDLNRHGEKVTLAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP PG G+++ + L+LK++AD+G++GLPNAGKST ++ ++ Sbjct: 121 GQGGMGNLHFKSSTNRAPRQWTPGKEGEQRRLRLELKVLADVGLLGLPNAGKSTLISRIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G FL+H RT V Sbjct: 181 NARPKVADYPFTTLHPNLGVVRTSASRSFVVADIPGLIEGASEGAGLGHLFLRHLARTRV 240 Query: 240 LLHIVSALE--------ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLA 290 LLH+V E A + I++EL Y+ EL K + L+++D V D D Sbjct: 241 LLHLVDISSPDPDTDPIEQAVADARAIVEELRRYDPELADKPRWLVLNKLDMVADPDAAR 300 Query: 291 RKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ E + G V F S + G G +++ L D + Sbjct: 301 QRFVEQFSWQGPV-FVISGLNGDGTQELIWALQDYL 335 >gi|239817185|ref|YP_002946095.1| GTPase ObgE [Variovorax paradoxus S110] gi|239803762|gb|ACS20829.1| GTP-binding protein Obg/CgtA [Variovorax paradoxus S110] Length = 362 Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 146/334 (43%), Positives = 233/334 (69%), Gaps = 9/334 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + I +GDGG G +SFR EK+ EFGGP+GG GGRGG V+ A SNLNTL+DFR Sbjct: 1 MKFVDEAFIDIAAGDGGNGCVSFRHEKYKEFGGPNGGDGGRGGHVYAVADSNLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A+ GE GM + GA G+D++L +PVGT + + + ++ +L +EG+ + +A G Sbjct: 61 YSRRHEARRGEHGMGSDMFGAAGDDILLKMPVGTIISDAETGEVLYELLKEGEVVTIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKS+ N+AP PG G++K + L+LK++AD+G++G+PNAGKST +++++ Sbjct: 121 GDGGFGNMRFKSAINRAPRQKTPGWPGEKKSLKLELKVLADVGLLGMPNAGKSTLISAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P+IADYPFTTL+PNLG+V+ G ++ F++AD+PG+I+ A +GAG+G FL+H +RT + Sbjct: 181 NARPRIADYPFTTLHPNLGVVRVGPEQSFVVADLPGLIEGASEGAGLGHLFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + ++ V Q I+ EL Y++ L +K + L+++D V +D A + + Sbjct: 241 LLHVIDMAPFDDAVDPVAQAKAIVGELKKYDAALYEKPRWLVLNKLDMVPADERAARVKD 300 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKI 326 + G V FE S++T G +++ ++ ++ Sbjct: 301 FVKRLRFKGPV-FEISALTREGCEHLVQAVYQQV 333 >gi|134095947|ref|YP_001101022.1| GTPase ObgE [Herminiimonas arsenicoxydans] gi|261266834|sp|A4G8R4|OBG_HERAR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|133739850|emb|CAL62901.1| Conserved hypothetical protein, putative GTPase [Herminiimonas arsenicoxydans] Length = 369 Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 152/332 (45%), Positives = 223/332 (67%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +GDGG G SF REKF FGGPDGG GG+GG +W A N+NTL+DFR Sbjct: 1 MKFIDEAKIEVIAGDGGNGVASFCREKFRPFGGPDGGDGGKGGSIWAVADRNINTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + KA+ GE G + G +D+ L +PVGT + + + LI DL + GQ +++A G Sbjct: 61 YSKMHKARDGENGRGADCYGKGADDIKLRMPVGTLIIDNNDGELIADLTEHGQEVLIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HFKSSTN+AP + G G+ + + L+LK++ADIG++G+PNAGKSTF+++V+ Sbjct: 121 GEGGWGNIHFKSSTNRAPRQKSEGKEGERRELRLELKVLADIGLLGMPNAGKSTFISAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ + K F++ADIPG+I+ A GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVSHEKSFVIADIPGLIEGASDGAGLGIQFLRHLQRTRL 240 Query: 240 LLHIVS-ALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHIV A +NV + I+ EL Y+ L K + L+++D V + ++ + Sbjct: 241 LLHIVDLAPFDNVDPVKEAKAIVKELKKYDESLFDKPRWLVLNKLDMVPEEERKKRVKDF 300 Query: 297 ATQCGQ--VPFEFSSITGHGIPQILECLHDKI 326 + G FE S++T G +++ ++D I Sbjct: 301 IKRFGWKGPVFEISALTHEGCSELVTEIYDYI 332 >gi|300779362|ref|ZP_07089220.1| obg family GTPase CgtA [Chryseobacterium gleum ATCC 35910] gi|300504872|gb|EFK36012.1| obg family GTPase CgtA [Chryseobacterium gleum ATCC 35910] Length = 327 Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 156/327 (47%), Positives = 215/327 (65%), Gaps = 8/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K++ +SG GGAG RREK+I GGPDGG GGRGG + ++ +N TL+ RY Sbjct: 4 FVDYVKIHCKSGHGGAGSAHLRREKYIPKGGPDGGDGGRGGHIIMKGNANEWTLLPLRYT 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA+ GE G K +GA G DV + VPVGT E+G +I ++ ++GQ IIL GG Sbjct: 64 RHVKAERGENGGKNQLTGAFGADVYIEVPVGTIAKNEEG-EIIGEILEDGQEIILMHGGK 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSSTNQ P YA PG+ G+E I +LK++AD+G++G PNAGKST LASV+ A Sbjct: 123 GGLGNEHFKSSTNQTPRYAQPGLPGEEGYIVFELKILADVGLVGFPNAGKSTLLASVSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLGIV YK F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 183 KPKIANYAFTTLTPNLGIVDYRNYKSFVMADIPGIIEGAAEGKGLGHRFLRHIERNSILL 242 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC- 300 ++ A EN ++ + +EL YN EL K I+ +S+ D +D + K E+A + Sbjct: 243 FLIPADSENHFQEFKILENELKEYNPELLDKDFIISVSKSDLLDDEL----KKEIAAEFP 298 Query: 301 -GQVPFEFSSITGHGIPQILECLHDKI 326 + P FS +TG G+ ++ + + ++ Sbjct: 299 ENRQPLFFSGVTGEGLMELKDAIWKQL 325 >gi|89093569|ref|ZP_01166517.1| GTP-binding protein [Oceanospirillum sp. MED92] gi|89082259|gb|EAR61483.1| GTP-binding protein [Oceanospirillum sp. MED92] Length = 399 Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 144/288 (50%), Positives = 203/288 (70%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G +SFRREK+I GGPDGG GG GG V++QA NLNTLID+R Sbjct: 1 MKFVDEAVITVEAGKGGNGCMSFRREKYIPKGGPDGGDGGDGGSVFLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + +H+KA++G+ GM RN +GAKGEDV+L VPVGT V + D ++ DL + GQ +A G Sbjct: 61 FTRHYKAENGQSGMGRNCTGAKGEDVILRVPVGTTVIDTDTDEILVDLTEIGQTEKIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G +G+ + + L+LK++AD+G++GLPNAGKST + +V+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQTTKGSMGETRNVKLELKVLADVGLLGLPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+A+YPFTTL PNLG+V+ E ++ F++ADIPGII+ A +GAG+G RFLKH R + Sbjct: 181 AAKPKVANYPFTTLVPNLGVVRIEKHRSFVIADIPGIIEGAAEGAGLGIRFLKHLARNRI 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH+V E + A ++EL ++ L + + L+++D V Sbjct: 241 LLHLVDMAPWDEVTPEEAAAVAVNELEKFSPTLADQPRWLVLNKLDMV 288 >gi|124516409|gb|EAY57917.1| GTP binding protein [Leptospirillum rubarum] Length = 360 Score = 265 bits (678), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 156/334 (46%), Positives = 220/334 (65%), Gaps = 8/334 (2%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+DEA++ I SG GG G +SFRREK++ GGPDGG GGRGGDV T +TL+DF++ Sbjct: 3 QFVDEARIAIESGKGGHGCVSFRREKYVPRGGPDGGDGGRGGDVVFVGTPRKSTLLDFKH 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + KAQ GE G + + G+ G +VL VP+GTQ+ +++ L+ DL Q RII+A GG Sbjct: 63 RTILKAQPGEAGRGKKQHGSNGRSLVLEVPLGTQILDDETGELLFDLTQPDVRIIVAKGG 122 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN HF ++T Q P +A PG Q I L+LK++A IG++G PNAGKSTFL+ VT+ Sbjct: 123 RGGRGNVHFATATRQTPDFAEPGGDSQSFRIRLELKVMARIGLVGFPNAGKSTFLSRVTK 182 Query: 182 AKPKIADYPFTTLYPNLGIVKEG----YKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 A P+IA YPFTTL+P+LG++ G +E ++AD+PG+I+ AH+G G+G +FLKH ERT Sbjct: 183 AHPRIASYPFTTLHPHLGVLLLGNPPDEREIVIADLPGLIEGAHEGKGLGIQFLKHVERT 242 Query: 238 HVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 +LLH V EN + AYQ + +E+ A+N +L K EI+ ++ D+ D D LA Sbjct: 243 EILLHFVDLSAENTHSPTEAYQIVRNEMLAFNKDLAMKPEILVGTKKDSADPDRLAELGA 302 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 LA + G+ SS TG G+P +L L + + S Sbjct: 303 FLARE-GRPKLFLSSHTGEGLPDLLSVLSETLPS 335 >gi|301168157|emb|CBW27746.1| putative GTP-binding protein [Bacteriovorax marinus SJ] Length = 336 Score = 265 bits (678), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 158/332 (47%), Positives = 218/332 (65%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE + I SG+GG G SFRREKF GGPDGG GG GG V+IQA +NTL++FR Sbjct: 1 MRFIDEVVITIISGNGGNGCASFRREKFYPLGGPDGGDGGDGGSVFIQADRGINTLVNFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ FKA+HG+ GM G GED+ L VPVGT + + +I DL + G++I++A G Sbjct: 61 SKRIFKAEHGQDGMNSQCHGRYGEDLTLNVPVGTIIRSAETGEIIGDLTEHGEKILMAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS NQAP +A G G+ I L+LKLIADI +IGLPNAGKST +++++ Sbjct: 121 GRGGMGNIHFKSSINQAPKHATFGKEGRTLEIELELKLIADIALIGLPNAGKSTLISTIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V G ++ F++ADIPG+I++A +G G+G +FLKH ERT Sbjct: 181 AAKPKIADYPFTTLEPNLGVVTMGPEQSFVVADIPGLIEDASEGKGLGIKFLKHIERTKA 240 Query: 240 LLHIVS---ALEE-NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 +H+V L+E Y I +EL YN +L K E+V L++ID + + + + + Sbjct: 241 FVHLVDVSWCLDEFEAFEQYVTIREELRKYNEDLLTKKELVCLTKIDAMTEEEIQKFIDF 300 Query: 296 LATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 Q + S+++G I +L+ L K F Sbjct: 301 FEEQIDRKVLPLSAVSGRNI-GLLKSLMLKTF 331 >gi|237746894|ref|ZP_04577374.1| GTPase ObgE [Oxalobacter formigenes HOxBLS] gi|229378245|gb|EEO28336.1| GTPase ObgE [Oxalobacter formigenes HOxBLS] Length = 369 Score = 265 bits (678), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 149/330 (45%), Positives = 227/330 (68%), Gaps = 7/330 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G+GG G SF REKF FGGPDGG GG+GG +W A +N+NTLIDF Sbjct: 1 MKFIDEAKIEVIAGNGGNGVASFNREKFKPFGGPDGGDGGKGGSIWAIADNNVNTLIDFH 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + ++A++GE G + G ED+VL +PVGT + + + ++I DL + GQR +LA G Sbjct: 61 YTKMYRAKNGENGRGSDCYGKGAEDIVLRMPVGTIITDRNTGAVIADLVENGQRQLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HFKSSTN+AP G G+ + L+LK++AD+G++G+PNAGKST +++V+ Sbjct: 121 GEGGWGNIHFKSSTNRAPRQKTDGKPGERLELQLELKVLADVGLLGMPNAGKSTLISAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ G+ K F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLQPNLGVVRIGHEKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + +E + + ++ EL Y+ EL KK + ++++D + + K + Sbjct: 241 LLHLIDLAPFDETADPVSGARALIAELEKYDPELAKKPRWLVVNKLDLISGEERNEKVRD 300 Query: 296 LATQCG-QVP-FEFSSITGHGIPQILECLH 323 L + G + P FE S+ T G +++E ++ Sbjct: 301 LVLRLGWKGPVFEISAYTKAGCAELMEAIY 330 >gi|119358213|ref|YP_912857.1| GTPase ObgE [Chlorobium phaeobacteroides DSM 266] gi|261266725|sp|A1BJ56|OBG_CHLPD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|119355562|gb|ABL66433.1| GTP1/OBG sub domain protein [Chlorobium phaeobacteroides DSM 266] Length = 337 Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 148/336 (44%), Positives = 220/336 (65%), Gaps = 8/336 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D A + I++GDGG G +SFRREKF+ GGPDGG GGRGG ++++A L TL+DFR Sbjct: 1 MKFVDSATISIQAGDGGRGCVSFRREKFVPKGGPDGGDGGRGGHIYLRANKQLATLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ + A G G ++G G D+V+ +P GT V LI DL ++GQ +++A G Sbjct: 61 YRKQYLATRGAHGQGSRKTGKDGSDIVIEIPCGTLVKNAQTHELIADLTEDGQEMLVARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF + T QAP YA PG+ G+ + ++LKL+AD+G++G PNAGKST ++ ++ Sbjct: 121 GKGGRGNQHFATPTRQAPRYAEPGLKGEAFELEMELKLMADVGLVGFPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLGIV+ E YK F++ADIPGII+ A +G G+G +FL+H ERT + Sbjct: 181 AAKPKIADYPFTTLVPNLGIVRYEEYKSFVMADIPGIIEGAAEGKGLGLQFLRHIERTKI 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+ +V+A ++ YQ ++ EL ++S L K I ++++D D + + Sbjct: 241 LVVLVAADAADIALEYQTLVQELEKFDSGLLLKPRIAVITKMDIASEDMVVPELE----- 295 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSI-RGENE 334 G SS+TG G+ ++ + L ++ + R E++ Sbjct: 296 -GVKLLMISSVTGKGLKELKDELWRQVSTCSRSEDQ 330 >gi|110636496|ref|YP_676703.1| GTPase ObgE [Cytophaga hutchinsonii ATCC 33406] gi|123163933|sp|Q11Z03|OBG_CYTH3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|110279177|gb|ABG57363.1| GTP-binding protein [Cytophaga hutchinsonii ATCC 33406] Length = 337 Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 150/321 (46%), Positives = 212/321 (66%), Gaps = 3/321 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D KV RSG GGAG + FR+EK GGPDGG+GGRGG + ++ L TL+ +Y Sbjct: 6 FIDYVKVCCRSGKGGAGAVHFRKEKHTPLGGPDGGNGGRGGHIILRGNVQLWTLLHLKYT 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+ GE+G SGA+G+D ++ VP+GT + + I ++ ++GQ IIL P G Sbjct: 66 KHIMAEDGERGGTNRASGAQGKDQIVEVPLGTIARDPETGEKIAEITEDGQEIILIPAGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK+STNQAP+YA PG G E + L+LK++AD+G++G PNAGKST L+ V+ A Sbjct: 126 GGLGNEQFKTSTNQAPHYAQPGEPGIEAWVILELKVLADVGLVGFPNAGKSTLLSKVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IADY FTTL PNLG+VK Y+ FI+ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 KPEIADYAFTTLAPNLGVVKYRDYRSFIMADIPGIIEGAAEGKGLGIRFLRHIERNSILL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +++A ++++A Y+ +L+EL YN EL K I+ +S+ D +D + A K EL Sbjct: 246 FLIAADSKDIRAEYEILLNELQKYNPELLHKDRILAISKSDMLDDELKAELKKELPKGVE 305 Query: 302 QVPFEFSSITGHGIPQILECL 322 V FSS G+ ++ + L Sbjct: 306 TV--FFSSYLNQGLTELKDLL 324 >gi|237756239|ref|ZP_04584800.1| Obg family GTPase CgtA [Sulfurihydrogenibium yellowstonense SS-5] gi|237691597|gb|EEP60644.1| Obg family GTPase CgtA [Sulfurihydrogenibium yellowstonense SS-5] Length = 346 Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 148/326 (45%), Positives = 220/326 (67%), Gaps = 4/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK+Y+++GDGG G ++F REK++ FGGP GG GG+GGD+ + A S+L TL+DFRY+ Sbjct: 2 FIDKAKIYVKAGDGGNGCVAFLREKYVPFGGPAGGDGGKGGDIILIADSSLQTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KA+ G+ G N+ G GED++L VPVGT V + + +I DL +EGQ +++A GG Sbjct: 62 RHYKAERGQHGQGGNKKGKDGEDLILKVPVGTVVKDAETGEIIADLVKEGQSVVVAKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA FKS TNQ P A G G+EK I L+LKL+AD+GIIG PNAGKST ++ +++A Sbjct: 122 GGRGNAAFKSPTNQTPMVAEKGEPGEEKWIELELKLLADVGIIGFPNAGKSTLISILSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEF-ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADYPFTTL P LG+++ ++ +LADIPG+I+ A +G G+G FL+H ERT L+ Sbjct: 182 RPKIADYPFTTLTPVLGVLQLDVNDYLVLADIPGLIEGASEGLGLGHEFLRHIERTKFLI 241 Query: 242 HIVSA---LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ E + A+ I EL Y+ +L KK +IV ++ID + +L + + Sbjct: 242 HLIDVSDFRERDPIDAFIIINKELEKYSQDLIKKPQIVVANKIDALSDKSLLDNLEKYFS 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHD 324 + G S IT I ++++ + + Sbjct: 302 ERGCPFVAVSLITRENIDKLVKLIRE 327 >gi|212704022|ref|ZP_03312150.1| hypothetical protein DESPIG_02075 [Desulfovibrio piger ATCC 29098] gi|212672527|gb|EEB33010.1| hypothetical protein DESPIG_02075 [Desulfovibrio piger ATCC 29098] Length = 367 Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 150/331 (45%), Positives = 225/331 (67%), Gaps = 10/331 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + +R+G GG G +SFRREKF+ GGPDGG GG+GG V ++A S L +L DFR Sbjct: 1 MRFVDEATIQVRAGKGGHGCVSFRREKFVPRGGPDGGDGGKGGSVILKADSRLLSLYDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGIS---LICDLDQEGQRIIL 117 ++ ++A++G+ GM +G KGED++L +PVGT V+ D + L+ DL + ++ Sbjct: 61 LKRQYEARNGQPGMGSQCNGRKGEDLILGLPVGTLVYARDEMGEEYLLADLREPDMEVVA 120 Query: 118 APGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 A GG GG GN HFK+ST +AP +A PG G+E+ + L+LK++AD G++GLPNAGKSTF++ Sbjct: 121 AQGGRGGMGNEHFKTSTMRAPRFAQPGEPGEERELRLELKILADAGLLGLPNAGKSTFIS 180 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVKEGY---KEFILADIPGIIKNAHQGAGIGDRFLKHT 234 V+ A+PKIA YPFTTL PNLG++ + Y + ++ADIPG+I+ AH+G G+G RFLKH Sbjct: 181 QVSAARPKIAAYPFTTLTPNLGVMIDEYDPDRRMVIADIPGLIEGAHEGQGLGHRFLKHV 240 Query: 235 ERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 ERT L+HI+S ++N A ++ I +EL ++ EL ++ +I +++ID VD + L Sbjct: 241 ERTRFLVHILSIEDVSDDNPWAGFELINEELRRFDPELAERRQIEVVNKIDLVDEERLEE 300 Query: 292 KKNELATQCGQVPFEFSSITGHGIPQILECL 322 ++ A G+ F S+ G GI ++ L Sbjct: 301 LRDR-ARADGREVFFISARDGIGIEDLVAAL 330 >gi|226951480|ref|ZP_03821944.1| GTPase ObgE family protein [Acinetobacter sp. ATCC 27244] gi|226837773|gb|EEH70156.1| GTPase ObgE family protein [Acinetobacter sp. ATCC 27244] Length = 406 Score = 265 bits (677), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 151/333 (45%), Positives = 225/333 (67%), Gaps = 8/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + + +GDGG G SFRREKF+ FGGPDGG GGRGG ++IQA + +TL+D+R Sbjct: 1 MRFVDEAVITVEAGDGGNGVASFRREKFVPFGGPDGGDGGRGGSIYIQADDDTSTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + ++A+ G+ G N SG GEDV+L VPVGT + + + +I DL +GQR+ +A G Sbjct: 61 YTRRYRAERGKNGSGANCSGRGGEDVILKVPVGTTIVDTESGDIIGDLVADGQRVKVANG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSSTN+AP GI G+ + + L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GDGGLGNTHFKSSTNRAPRKCTHGIKGEYREVRLELKVLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTT+ PNLG+V + ++ F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTMVPNLGVVDADRHRSFVMADIPGLIEGAAEGAGLGIRFLKHLARTRI 240 Query: 240 LLHIVSALE-ENVQAAY--QCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHIV + A+ + IL EL ++ L K ++ L+++D + ++ + Sbjct: 241 LLHIVDVQPIDGSDPAHNARAILAELEKFSPTLAKLPVVLVLNKLDQLPEESREEWCQHI 300 Query: 297 ATQC---GQVPFEFSSITGHGIPQILECLHDKI 326 + G V F+ S + G +++ L D+I Sbjct: 301 LDELQWKGPV-FKTSGLMSEGTKEVVYYLMDQI 332 >gi|300115550|ref|YP_003762125.1| GTP-binding protein Obg/CgtA [Nitrosococcus watsonii C-113] gi|299541487|gb|ADJ29804.1| GTP-binding protein Obg/CgtA [Nitrosococcus watsonii C-113] Length = 345 Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 153/329 (46%), Positives = 225/329 (68%), Gaps = 7/329 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +++G GG G +SFRREKFI FGGPDGG GG GG +++ A N+NTL+DFR Sbjct: 1 MKFIDEAIIKVQAGAGGHGCLSFRREKFIPFGGPDGGDGGNGGSIYLIADKNINTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q HF+AQ GE G R ++G ED+ + VP+GT+ +E + L+ DL + GQ +++A G Sbjct: 61 HQHHFRAQRGENGRGRLQTGKSSEDIYIPVPLGTEAWEAETEELLGDLTRPGQTLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP G G+E+ + L+LKL+AD+G++GLPNAGKSTF+ V+ Sbjct: 121 GAHGLGNTRFKSSTNRAPRKTTQGKPGEERTLRLELKLLADVGLLGLPNAGKSTFIRQVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTL+P+LG+V+ + + F+ ADIPG+I+ A QGAG+G RFLKH RT + Sbjct: 181 AATPKVADYPFTTLHPHLGVVRIDPNRSFVAADIPGLIEGAAQGAGLGVRFLKHLSRTRL 240 Query: 240 LLHIVSA--LEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH V A LE ++ A+ + I EL ++ +L + + + L++ D + S A + E Sbjct: 241 LLHFVDAAPLETSLDPVASVRTIHRELQQFSPKLAAQEQWLVLNKTDLISSPKRAGRCQE 300 Query: 296 LATQ-CGQVP-FEFSSITGHGIPQILECL 322 + + C Q +E S++TG G +++ + Sbjct: 301 IIREICWQKSVYEISALTGEGCQRLIHAV 329 >gi|332878760|ref|ZP_08446476.1| Obg family GTPase CgtA [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683288|gb|EGJ56169.1| Obg family GTPase CgtA [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 332 Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 150/326 (46%), Positives = 222/326 (68%), Gaps = 3/326 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D K+Y SG+GGAG + REKF+ GGPDGG GGRGG + ++ +L TLI F++Q Sbjct: 6 FTDYVKIYAASGNGGAGSMHLHREKFVPKGGPDGGDGGRGGHIILKGNKHLWTLIHFKFQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HF+A+HGE G GA G+D+ L VP+GT V + + ++ ++ ++GQ +I GG Sbjct: 66 KHFRAEHGEAGGANRSFGADGKDIYLEVPLGTIVKDAETEEVLFEITEDGQEVIALRGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+++TNQ P YA PG+ G+E+ + L+LK++AD+G++G PNAGKST L+ +T A Sbjct: 126 GGLGNWHFRTATNQTPRYAQPGLPGEERELLLELKVLADVGLVGFPNAGKSTLLSVITSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI DYPFTTL PNLGIV+ ++ F++ADIPGII+ A +G G+G FL+H ER +LL Sbjct: 186 KPKIGDYPFTTLKPNLGIVENRDFQSFVMADIPGIIEGAAEGKGLGHFFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A ++ A Y+ +L+EL YN EL K +V +S+ D +D + A ELA + Sbjct: 246 FLIPADANDIVAEYEILLNELKKYNPELLDKQRLVAISKSDMLDEELTAAIDKELAAKL- 304 Query: 302 QVPFEF-SSITGHGIPQILECLHDKI 326 +VP+ F SS++G GI ++ + L ++ Sbjct: 305 KVPYLFISSVSGKGIQKLKDELMSRL 330 >gi|288817910|ref|YP_003432257.1| GTP-binding protein [Hydrogenobacter thermophilus TK-6] gi|288787309|dbj|BAI69056.1| GTP-binding protein [Hydrogenobacter thermophilus TK-6] gi|308751509|gb|ADO44992.1| GTP-binding protein Obg/CgtA [Hydrogenobacter thermophilus TK-6] Length = 343 Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 157/324 (48%), Positives = 224/324 (69%), Gaps = 4/324 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+++++GDGG G ++F REK+ FGGP GG GG+GGDV + ATS +TL DF+++ Sbjct: 2 FVDKVKIHVKAGDGGDGAVAFLREKYKPFGGPAGGDGGKGGDVILLATSRKHTLYDFKHK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HF+A+ GEKG +N+ G GED+VL VP+GT V + ++CDL +EGQR ++A GG Sbjct: 62 RHFRAKSGEKGRGKNQHGKDGEDLVLEVPLGTVVIDASSGKVLCDLTEEGQRCVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F + TNQAP YA G G+EK I L+LKLIADIGIIGLPNAGKST ++ +T+A Sbjct: 122 GGRGNARFATPTNQAPRYAEKGEKGEEKWIVLELKLIADIGIIGLPNAGKSTLISKLTKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADYPFTTL P LG+++ E + +LADIPG+I++A G G+G FL+H ERT +LL Sbjct: 182 KPKIADYPFTTLSPVLGVMQLEDGRRIVLADIPGLIEDASAGKGLGLEFLRHIERTKLLL 241 Query: 242 HI--VSALEENVQA-AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+ VS L + A++ + E+ Y+ +L +K +IV ++ID + +K E + Sbjct: 242 HLIDVSDLRQTDPVDAFKKVNAEMEKYHPKLLEKRQIVVGTKIDMLSDKNTLQKLEEEFS 301 Query: 299 QCGQVPFEFSSITGHGIPQILECL 322 + G SS TG G+ ++ E + Sbjct: 302 KMGYPFVAISSHTGEGLEELKEII 325 >gi|295677738|ref|YP_003606262.1| GTP-binding protein Obg/CgtA [Burkholderia sp. CCGE1002] gi|295437581|gb|ADG16751.1| GTP-binding protein Obg/CgtA [Burkholderia sp. CCGE1002] Length = 373 Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 156/333 (46%), Positives = 224/333 (67%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVIAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+D+ L +PVGT + + + LI DL + Q + +A G Sbjct: 61 YAKKHLARNGENGRGSDCYGKGGDDITLRMPVGTTITDMETGELIADLTEHNQSVQIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMVRLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G + F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPSRSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKN 294 LLHIV + +E++ A + I++EL Y+ EL +K + L+++D V + D AR Sbjct: 241 LLHIVDIAPFDESIDPIAEAKAIVNELRKYDEELYQKPRWLVLNKLDMVPEDDREARVAA 300 Query: 295 ELATQCGQVP-FEFSSITGHGIPQILECLHDKI 326 L P FE S++TG G + + D + Sbjct: 301 FLEGFGWDGPVFEISALTGQGCENLCYAVFDYL 333 >gi|326318385|ref|YP_004236057.1| GTP-binding protein Obg/CgtA [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375221|gb|ADX47490.1| GTP-binding protein Obg/CgtA [Acidovorax avenae subsp. avenae ATCC 19860] Length = 357 Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 149/334 (44%), Positives = 230/334 (68%), Gaps = 9/334 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFR EK+ EFGGP+GG GGRGG V+ A +LNTL+D+R Sbjct: 1 MKFVDEAFIDVAAGDGGNGCVSFRHEKYKEFGGPNGGDGGRGGHVFAVADPSLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A+ GE GM + GA G+D+ L +PVGT + + + ++ +L + G+ I +A G Sbjct: 61 YSRRHEAKRGEHGMGSDMFGAAGDDITLKMPVGTIISDAETGEVLFELLKPGETITIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKS+ N+AP PG G+ + + L+LK++AD+G++G+PNAGKSTF+A+V+ Sbjct: 121 GDGGFGNMRFKSAINRAPRQKTPGWPGERRNLKLELKVLADVGLLGMPNAGKSTFIAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G ++ F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVGPEQSFVVADIPGLIEGASEGAGLGHQFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E V Q I+ EL Y++EL +K + L+++D V D A + + Sbjct: 241 LLHVVDLAPFDEGVDPVAQAAAIVGELRKYDAELYEKPRWLVLNKLDMVPGDERAARVKD 300 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKI 326 + G V FE S++T G +++ ++ + Sbjct: 301 FVKRFRWKGPV-FEISALTREGCEPLIQAIYQHV 333 >gi|332519855|ref|ZP_08396319.1| GTP-binding protein Obg/CgtA [Lacinutrix algicola 5H-3-7-4] gi|332044414|gb|EGI80608.1| GTP-binding protein Obg/CgtA [Lacinutrix algicola 5H-3-7-4] Length = 331 Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 149/322 (46%), Positives = 214/322 (66%), Gaps = 3/322 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+++ SG GG G REK+I GGPDGG GGRGG + ++ SNL TL+ +++ Sbjct: 6 FVDYVKMHVTSGKGGKGSTHLHREKYIAKGGPDGGDGGRGGHIILKGNSNLWTLLHLKFK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H +A HGE G +GA GED+ + VP+GT V + + ++ ++ ++G+ I+A GG Sbjct: 66 RHIRAGHGEHGSSGRSTGADGEDMYVEVPLGTVVRDTETNEILFEITKDGEERIVAEGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSSTNQ P YA PGI +EK I L+LK++AD+G++G PNAGKST L+ VT A Sbjct: 126 GGRGNWHFKSSTNQTPRYAQPGIPQEEKDITLELKVLADVGLVGFPNAGKSTLLSVVTSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLGIVK Y+ F++ADIPGII+ A +G G+G FL+H ER +LL Sbjct: 186 KPKIADYEFTTLKPNLGIVKYRDYQTFVMADIPGIIEGAAEGKGLGYYFLRHIERNSILL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A +++ Y +LDEL YN E+ K ++ +S+ D +D + A K EL + Sbjct: 246 FLIPADAPDIKKQYDVLLDELRRYNPEMLDKERLIAISKSDMLDDELKAEMKVELDNEL- 304 Query: 302 QVPFEF-SSITGHGIPQILECL 322 +P+ F SS+ G+ ++ + L Sbjct: 305 PIPYLFISSVAQQGLTELKDML 326 >gi|169632773|ref|YP_001706509.1| GTPase ObgE [Acinetobacter baumannii SDF] gi|261266630|sp|B0VTQ1|OBG_ACIBS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|169151565|emb|CAP00338.1| putative GTP-binding protein (Obg) [Acinetobacter baumannii] Length = 406 Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 148/333 (44%), Positives = 223/333 (66%), Gaps = 8/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + + +GDGG G SFRREKF+ FGGPDGG GGRGG ++IQA + +TL+D+R Sbjct: 1 MRFVDEAVITVEAGDGGNGVASFRREKFVPFGGPDGGDGGRGGSIYIQADDDTSTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A+ G+ G N +G GEDVVL VPVGT + + D +I DL ++GQR+++A G Sbjct: 61 YTRKLRAERGKNGAGANCTGRGGEDVVLKVPVGTTIVDTDSGDIIGDLVEDGQRVMVASG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ + I L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GEGGLGNTHFKSSTNRAPRKCTTGTKGEFREIRLELKVLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTT+ PNLG+V + ++ F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTMVPNLGVVDADRHRSFVMADIPGLIEGAAEGAGLGIRFLKHLARTRI 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHI+ + + I++EL+ ++ L ++ L+++D + ++ + Sbjct: 241 LLHIIDVQPIDGSDPAHNAKAIMNELAKFSPTLANLPIVLVLNKLDQIAEESREEWCQHI 300 Query: 297 ATQ---CGQVPFEFSSITGHGIPQILECLHDKI 326 + G V F+ S + G +++ L D+I Sbjct: 301 LDELQWTGPV-FKTSGLLEEGTKEVVYYLMDQI 332 >gi|294651003|ref|ZP_06728343.1| GTP1/Obg family GTP-binding protein [Acinetobacter haemolyticus ATCC 19194] gi|292823104|gb|EFF81967.1| GTP1/Obg family GTP-binding protein [Acinetobacter haemolyticus ATCC 19194] Length = 406 Score = 265 bits (676), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 150/333 (45%), Positives = 223/333 (66%), Gaps = 8/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + + +GDGG G SFRREKF+ FGGPDGG GGRGG ++IQA + +TL+D+R Sbjct: 1 MRFVDEAVITVEAGDGGNGVASFRREKFVPFGGPDGGDGGRGGSIYIQADDDTSTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + ++A+ G+ G N SG GEDV+L VPVGT + + + +I DL +GQR+ +A G Sbjct: 61 YTRRYRAERGKNGSGANCSGRGGEDVILKVPVGTTIVDTESGDIIGDLVADGQRVKVANG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSSTN+AP GI G+ + + L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GDGGLGNTHFKSSTNRAPRKCTHGIKGEYREVRLELKVLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTT+ PNLG+V + ++ F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTMVPNLGVVDADRHRSFVMADIPGLIEGAAEGAGLGIRFLKHLARTRI 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHIV + + IL EL ++ L K ++ L+++D + ++ + Sbjct: 241 LLHIVDVQPIDGSDPAHNARAILAELEKFSPTLAKLPVVLVLNKLDQLPEESREEWCQHI 300 Query: 297 ATQC---GQVPFEFSSITGHGIPQILECLHDKI 326 + G V F+ S + G +++ L D+I Sbjct: 301 LDELQWKGPV-FKTSGLMSEGTKEVVYYLMDQI 332 >gi|114320008|ref|YP_741691.1| GTP1/OBG domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|122312144|sp|Q0AAD6|OBG_ALHEH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|114226402|gb|ABI56201.1| GTP1/OBG sub domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 358 Score = 265 bits (676), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 148/334 (44%), Positives = 220/334 (65%), Gaps = 9/334 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + + GDGG G SFRREK+I GGPDGG GG GG VW++A LNTL DFR Sbjct: 1 MKFVDEVTIRVEGGDGGDGCASFRREKYIPRGGPDGGDGGHGGSVWLRADEGLNTLADFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F AQ GE GM + R G G+D + VPVGT V + D LI +L + GQR+++A G Sbjct: 61 HERKFTAQRGENGMGKQRYGKSGQDREIAVPVGTLVSDADTGELIGELLEHGQRLLVARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP PG + + L+L+L+AD+G++G+PNAGKST + +++ Sbjct: 121 GKGGLGNVHFKSSTNRAPRQYTPGTKADRRNLHLELRLLADVGLLGMPNAGKSTLVRAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P++ADYPFTTLYPNLG+V G + F++ADIPG+I+ A +GAG+G +FLKH RT + Sbjct: 181 SARPRVADYPFTTLYPNLGVVSVGAARSFVVADIPGLIEGAAEGAGLGIQFLKHLGRTRL 240 Query: 240 LLHIVSAL-----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 +LH++ A+ ++ V A + I+ EL Y+ L + + L+++D + + N Sbjct: 241 VLHVIDAVPLDPAQDPVDDARK-IVAELGRYSESLAARERWLVLNKLDLLPEEDRDAHVN 299 Query: 295 ELAT--QCGQVPFEFSSITGHGIPQILECLHDKI 326 +L Q G + S+++G G Q+ + + +++ Sbjct: 300 DLLQRLQWGGPVYRISALSGDGTRQLAQDVMNRL 333 >gi|71276197|ref|ZP_00652476.1| GTP-binding protein, HSR1-related:GTP1/OBG subdomain [Xylella fastidiosa Dixon] gi|71900456|ref|ZP_00682587.1| GTP1/OBG subdomain [Xylella fastidiosa Ann-1] gi|170730689|ref|YP_001776122.1| GTPase ObgE [Xylella fastidiosa M12] gi|261277753|sp|B0U3R3|OBG_XYLFM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|71162958|gb|EAO12681.1| GTP-binding protein, HSR1-related:GTP1/OBG subdomain [Xylella fastidiosa Dixon] gi|71729762|gb|EAO31862.1| GTP1/OBG subdomain [Xylella fastidiosa Ann-1] gi|167965482|gb|ACA12492.1| GTP-binding protein [Xylella fastidiosa M12] Length = 357 Score = 265 bits (676), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 135/245 (55%), Positives = 183/245 (74%), Gaps = 1/245 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +G+GG G +SFRREKFI GGPDGG GG GG VW+ A NLNTL+DFR Sbjct: 1 MKFVDEAEIQVIAGNGGDGCVSFRREKFIPLGGPDGGDGGDGGSVWLVADENLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ FKAQ G GM + G G+D +++VP+GT V +I D+ + G R+++A G Sbjct: 61 HERIFKAQRGVNGMGQQMYGKAGQDKIISVPIGTVVINVQTDEVIGDMVRHGDRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP A PG LG+E+ + L+LKL+ADIG++G PN GKSTF+ +V+ Sbjct: 121 GTGGLGNMHFKSSINRAPRQARPGELGEERTLKLELKLLADIGMLGFPNVGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTLYPNLG+VK E Y F++AD+PG+I+ A G G+G +FL+H +RT + Sbjct: 181 AATPKVADYPFTTLYPNLGVVKIEAYSSFVIADVPGLIEGAADGVGLGTQFLRHLQRTKL 240 Query: 240 LLHIV 244 LLH+V Sbjct: 241 LLHMV 245 >gi|307243113|ref|ZP_07525287.1| Obg family GTPase CgtA [Peptostreptococcus stomatis DSM 17678] gi|306493473|gb|EFM65452.1| Obg family GTPase CgtA [Peptostreptococcus stomatis DSM 17678] Length = 426 Score = 265 bits (676), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 145/322 (45%), Positives = 221/322 (68%), Gaps = 4/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+A++++++G+GG G +SFRREK++ GGPDGG GGRG ++ + A + L TL+DF+Y+ Sbjct: 2 FIDKARIFVKAGNGGNGAVSFRREKYVPAGGPDGGDGGRGANIIMVADTGLRTLMDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + AQHGE G K+ R+G GED++L+VP GT + +E +I DL + G + ++A GG Sbjct: 62 KKYSAQHGEDGSKKKRAGKNGEDLILSVPEGTVIRDEKTGLIIADLKKAGDKAVVARGGY 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF ++ QAP +A G GQE+ I L+LK+IAD+G++G PN GKSTFL+ VT A Sbjct: 122 GGKGNQHFANAVRQAPAFAKSGTDGQERWITLELKMIADVGLLGFPNVGKSTFLSVVTSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V+ + E F++ADIPGII+ A G G+G FL+H ERT VL+ Sbjct: 182 KPKIANYHFTTLTPNLGVVQTRHGESFVIADIPGIIEGAADGVGLGHDFLRHVERTKVLV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 HIV S +E + ++ I +EL YN +L + ++V ++ D + +T+ + Sbjct: 242 HIVDISGIEGRDPIDDFEKINEELRLYNEKLASRPQLVVANKSDLLFDETIYENFKKTME 301 Query: 299 QCGQVPFEFSSITGHGIPQILE 320 + G F+ S++T G+ Q+++ Sbjct: 302 EKGYEVFKMSAVTRDGVDQVID 323 >gi|304309971|ref|YP_003809569.1| GTP-binding protein Obg [gamma proteobacterium HdN1] gi|301795704|emb|CBL43903.1| GTP-binding protein Obg [gamma proteobacterium HdN1] Length = 395 Score = 265 bits (676), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 144/290 (49%), Positives = 207/290 (71%), Gaps = 12/290 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +GDGG G +SFRREKFI GGPDGG+GG GG V+I+ NLNTL+D+R Sbjct: 1 MKFVDEAKISVEAGDGGNGCLSFRREKFIPLGGPDGGNGGAGGSVYIETDVNLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++AQ G+ G N +GA G+D+VL VPVGT + +ED ++ DL + GQ++++A G Sbjct: 61 FTRMYRAQRGDGGAGANCTGASGDDIVLRVPVGTTIIDEDTEEVLGDLAEAGQQLLVARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN+ FKSS N+AP PG G+++ + L+LK++AD+G++G+PNAGKS+ + +V+ Sbjct: 121 GRGGLGNSCFKSSRNRAPRKTTPGTPGEKRNLRLELKVLADVGLLGMPNAGKSSLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+VK + + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVKVDKMRSFVMADIPGLIEGAAEGAGLGVRFLKHLARTRL 240 Query: 240 LLHIV-------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 LLH+V S ENV I EL ++ L ++ + L++ID Sbjct: 241 LLHVVDIAPWDGSDPAENVAR----IAVELERFSLALSERERWLVLNKID 286 >gi|114776734|ref|ZP_01451777.1| GTP-binding protein, GTP1/OBG family [Mariprofundus ferrooxydans PV-1] gi|114552820|gb|EAU55251.1| GTP-binding protein, GTP1/OBG family [Mariprofundus ferrooxydans PV-1] Length = 343 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 157/338 (46%), Positives = 220/338 (65%), Gaps = 6/338 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE K+ +R+G+GG G SFRREK++ GGPDGG GGRGG V A+ + NTL + Sbjct: 1 MRFIDEVKIEVRAGNGGKGCSSFRREKYVAKGGPDGGDGGRGGHVIFVASISKNTLQELY 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ A++G+ GM + G GED+++ VPVGT V +E G L+CDL G R LA G Sbjct: 61 LRKRLIAKNGQPGMGSDCHGKNGEDIIVEVPVGTMVHDETG-HLLCDLSTPGMRFTLARG 119 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F +STN+AP Y+ PG+ G++ I L+LKL+AD+G++GLPNAGKST LA ++ Sbjct: 120 GAGGMGNARFSTSTNRAPRYSQPGLEGEQGIRHLELKLMADVGLLGLPNAGKSTLLARIS 179 Query: 181 RAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL P LG + + F++ADIPG+I+ AH+G G+G RFL+H ERT V Sbjct: 180 NARPKIADYPFTTLKPKLGQVFMDDGDGFVVADIPGLIEGAHEGRGLGIRFLRHIERTAV 239 Query: 240 LLHIV-SALEENVQAAYQC--ILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V SA EE A Q I EL Y L K ++ L++ D + + L E Sbjct: 240 LLHLVDSACEEGRSVAEQIAEIEAELKGYGETLWNKPRLLVLNKADALLDEEL-ESALEQ 298 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 A Q G S++TG G+ +L +++++ S R + + Sbjct: 299 AKQTGLSVMVISAVTGEGVKMLLHTVYERVLSDREQRQ 336 >gi|161723242|ref|YP_096654.2| GTPase ObgE [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|261266899|sp|Q5ZS70|OBG_LEGPH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 341 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 141/288 (48%), Positives = 204/288 (70%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G +SFRREKFI GGPDGG GG GG ++ +A+S+LNTLIDFR Sbjct: 1 MKFVDEALIKVEAGKGGNGCLSFRREKFIPRGGPDGGDGGDGGSIYFEASSDLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +KA++G+ GM N +G KG+D+ + VPVGT V++ D L+ D+ Q G +++A G Sbjct: 61 YTRQYKAENGQSGMGGNCTGKKGDDLTIKVPVGTMVYDADTGELLADISQPGIPVLIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN +KSS N++P PG G+ + + L+L+++AD+G++GLPNAGKST + +V+ Sbjct: 121 GFHGLGNTRYKSSVNRSPRQTTPGSPGESRNLRLELRVLADVGLLGLPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +K K+ADYPFTTL+P LG+V+ YK F++ADIPG+I+ A QGAG+G RFLKH RT V Sbjct: 181 SSKAKVADYPFTTLHPGLGVVRVSPYKSFVMADIPGLIEGAAQGAGLGHRFLKHLSRTCV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH++ + A + IL+EL+ YN +L K + L++ID + Sbjct: 241 LLHVIDIAPLDGSDPVADAKAILNELTQYNPDLLNKPRWLVLNKIDML 288 >gi|269958803|ref|YP_003328591.1| GTPase ObgE [Anaplasma centrale str. Israel] gi|269848633|gb|ACZ49277.1| GTPase ObgE [Anaplasma centrale str. Israel] Length = 349 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 153/299 (51%), Positives = 210/299 (70%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DEAK+YIR G GG G +SFRREKF+EFGGPDGG+GG GG V A++ +NTL+ FR Sbjct: 1 MSFVDEAKIYIRGGKGGDGCVSFRREKFVEFGGPDGGNGGNGGSVIFIASNAVNTLLYFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QH +A++G+ G + + GA G D V+ VPVGTQ+++E G LI DL+ GQR I A G Sbjct: 61 YNQHIRAENGKPGSGKGKFGAAGRDRVVEVPVGTQLYDEHGDDLIADLNSVGQRHIAAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA +KSSTN+AP Y G G+E + LKLK+++D+GIIG+PNAGKS+ L+ T Sbjct: 121 GRGGVGNAQYKSSTNRAPTYFTYGTPGEEHCVLLKLKIVSDVGIIGMPNAGKSSLLSRCT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +K K++DYPFTTL P+LG+ E +LADIPG+I+NA+ GAG+G +FLKH ER +L Sbjct: 181 ASKTKVSDYPFTTLEPHLGVAYANGCELVLADIPGLIENANLGAGLGHKFLKHIERCVIL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LH+V +V AY+ + EL ++ EL K E+V L++ D + + + K+ LA+ Sbjct: 241 LHLVDCSLPDVVGAYELVRRELQLHSEELACKQEVVILNKCDLLSGEEVKEKQKLLASS 299 >gi|264676902|ref|YP_003276808.1| iron(II) transporter [Comamonas testosteroni CNB-2] gi|299529720|ref|ZP_07043157.1| iron(II) transport protein [Comamonas testosteroni S44] gi|262207414|gb|ACY31512.1| iron(II) transport protein [Comamonas testosteroni CNB-2] gi|298722583|gb|EFI63503.1| iron(II) transport protein [Comamonas testosteroni S44] Length = 371 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 156/346 (45%), Positives = 233/346 (67%), Gaps = 13/346 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + I +GDGG G +SFR EK+ EFGGPDGG GGRGG V+ A NLNTL+D+R Sbjct: 1 MKFVDEAFIDIAAGDGGNGCVSFRHEKYKEFGGPDGGDGGRGGHVYAVADVNLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A+ G+ GM + GA G+D+ L +PVGT + + D ++ +L + GQ I +A G Sbjct: 61 YSRRHEAKRGQHGMGSDMFGAAGDDITLNMPVGTIISDADTGEVLFELLEPGQVITIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKS+ N+AP PG G+ + + L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GDGGFGNLRFKSAINRAPRQKTPGYPGERRNLKLELKVLADVGLLGMPNAGKSTFITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ ++ F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVAAEQSFVVADIPGLIEGASEGAGLGHQFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV + +E V Q I+ EL Y++EL +K + L+++D V + A K + Sbjct: 241 LLHIVDIAPFDEGVDPVEQARAIVAELKKYDAELYEKPRWLVLNKLDMVPEEERAAKVKD 300 Query: 296 LATQC---GQVPFEFSSITGHG----IPQILECLHDKIFSIRGENE 334 + G V +E S++T G I +I E +H++ + + E Sbjct: 301 FVKRFKWKGPV-YEISALTREGCEPLIRKIYEHVHNQQLAEQAPKE 345 >gi|146328972|ref|YP_001209400.1| GTP binding domain-containing protein [Dichelobacter nodosus VCS1703A] gi|261266764|sp|A5EVP4|OBG_DICNV RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|146232442|gb|ABQ13420.1| GTP binding domain protein [Dichelobacter nodosus VCS1703A] Length = 353 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 146/339 (43%), Positives = 224/339 (66%), Gaps = 9/339 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE + +++G GG G +SFRREK+IEFGGPDGG GG GG V+++A+ LNTL DFR Sbjct: 1 MRFVDEVVINVKAGKGGNGIVSFRREKYIEFGGPDGGDGGDGGSVYLRASDGLNTLSDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HF+A++G G RN+ G GED+ + VP+GTQVF + L+ DL GQ +++A G Sbjct: 61 YTRHFEAENGAAGEGRNKRGRSGEDLYIDVPLGTQVFVAETDELMGDLTAVGQTLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN +KSS N+AP G LG+E++I L+LKL+AD+G++G+PNAGKST +A V+ Sbjct: 121 GFHGIGNTRYKSSVNRAPRQCKAGGLGEERVIRLELKLLADVGLLGMPNAGKSTLIAQVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL+PNLG+V+ G + F++ADIPG+I A G G+G +FL+H R + Sbjct: 181 SAKPKIADYPFTTLHPNLGVVRVGALQSFVMADIPGLIAGAADGMGLGHQFLRHLARNRI 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ +N ++ + EL Y+++ + + L+++DT+ + +K+ E Sbjct: 241 LLHLLDCSPMSDSQNPITDFEQVSAELIKYDADFAQIPRWLVLNKMDTLPPELWQQKQEE 300 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 + G+V F S+ G G ++ + ++ +++ Sbjct: 301 IVRALNWQGKV-FSISAAAGIGTAELCTAIMQELTAMKA 338 >gi|160902490|ref|YP_001568071.1| GTPase ObgE [Petrotoga mobilis SJ95] gi|261277663|sp|A9BK05|OBG_PETMO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|160360134|gb|ABX31748.1| GTP-binding protein Obg/CgtA [Petrotoga mobilis SJ95] Length = 440 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 147/328 (44%), Positives = 219/328 (66%), Gaps = 4/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + + +G GG G +SFRREKF+E GGPDGG GG GG + I++T N NTL+DF+Y+ Sbjct: 5 FVDEVNIKVIAGKGGDGAVSFRREKFVEKGGPDGGDGGDGGSIIIKSTLNKNTLVDFKYK 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F+A++GE G +N++G GEDV++ VPVGT +++ + L+ DL Q +++A GG Sbjct: 65 KIFRAENGENGKNKNKAGKAGEDVLIEVPVGTCIYDLETNELLSDLKAPQQYLVVARGGK 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F +ST Q P A G+ G+ K + L LK++AD+G+IG PN GKST ++ ++ A Sbjct: 125 GGRGNARFATSTLQVPRIAEKGVEGEVKNLKLILKIVADVGLIGYPNVGKSTLISRISNA 184 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K +IADYPFTT+ PNLG+VK + F++ADIPG+I+ AH G G+GD+FL+H ER VL+ Sbjct: 185 KVEIADYPFTTIVPNLGVVKVDTDYSFVVADIPGLIEGAHLGKGLGDQFLRHIERCSVLV 244 Query: 242 HI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+ +S E + Y I EL +++ L KK EI+ ++ID VD DTL ++ + Sbjct: 245 HLIDISCFERDDPVEDYINIRKELESFSHILLKKKEIIVANKIDAVDKDTLEKRLTDFKN 304 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKI 326 + G+ F S+ TG I +++ + I Sbjct: 305 RTGKDIFPISAYTGENIQELITMVWSHI 332 >gi|152998231|ref|YP_001343066.1| GTP-binding protein Obg/CgtA [Marinomonas sp. MWYL1] gi|261266889|sp|A6W352|OBG_MARMS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|150839155|gb|ABR73131.1| GTP-binding protein Obg/CgtA [Marinomonas sp. MWYL1] Length = 396 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 152/328 (46%), Positives = 219/328 (66%), Gaps = 8/328 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA +Y+R+G GG G +SF REKF+ GGPDGG GG GG V + A LNTLIDFR Sbjct: 1 MKFVDEASIYVRAGKGGNGALSFWREKFVAKGGPDGGDGGNGGSVVLVADEALNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + + A+ GE G R+ +G+KG D+ + VPVGT V +ED + DL ++GQ++ +A G Sbjct: 61 FTKKYIAESGEGGQGRDMTGSKGADLEIKVPVGTTVIDEDTGETLGDLVRDGQKLKVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+ G GN FKSSTN+AP G +G+E+ + L++K++AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GHHGLGNTRFKSSTNRAPRQTTKGTVGEERTLKLEMKVLADVGLLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+VK + ++ F++ADIPGII+ A +GAG+G RFLKH R + Sbjct: 181 SAKPKVADYPFTTLVPNLGVVKVKKHQSFVIADIPGIIEGASEGAGLGIRFLKHLVRNRI 240 Query: 240 LLHIV--SALEENVQAAYQCI-LDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHIV + +E A I ++EL ++ L ++ + L++ D V D L + + Sbjct: 241 LLHIVDLAPWDEITPAEAAVIAVNELHQFSPALAERERWLVLNKTDMVPEDELEERCQSV 300 Query: 297 ATQCGQ--VPFEFSSITGHGIPQILECL 322 G + S+I+G G + CL Sbjct: 301 IDALGWEGKAYRISAISGEGTEVL--CL 326 >gi|254483449|ref|ZP_05096678.1| GTP-binding protein Obg/CgtA [marine gamma proteobacterium HTCC2148] gi|214036323|gb|EEB77001.1| GTP-binding protein Obg/CgtA [marine gamma proteobacterium HTCC2148] Length = 399 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 151/337 (44%), Positives = 223/337 (66%), Gaps = 8/337 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G +SFRREK++ GGPDGG GG GG V+++ NLNT++D+R Sbjct: 1 MKFVDEASITVYAGKGGNGALSFRREKYVARGGPDGGDGGDGGSVFLEGDVNLNTMVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A GE G +N +G GED++L VP+GT V +ED ++ D+ GQ++ +A G Sbjct: 61 FVRSYRADIGEGGSGKNCTGRSGEDLILKVPIGTTVLDEDTGEILGDIQASGQQLKVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G+ + + L+LK++AD+G++GLPNAGKST + +V+ Sbjct: 121 GFHGLGNTRFKSSTNRAPRQITPGSEGEVRSLKLELKVLADVGLLGLPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+VK E ++ F++ADIPG+I+ A +GAG+G RFLKH R + Sbjct: 181 SAKPKVADYPFTTLVPNLGVVKVEAHRSFVIADIPGLIEGASEGAGLGIRFLKHLTRNRI 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV E +A I EL +++ L ++ + L++ D +D++T A +K Sbjct: 241 LLHIVDMAPFDGTEPADSAV-AIAGELGRFSATLAERERWLVLNKTDLIDAETFAERKTA 299 Query: 296 -LATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 LA Q P +E S+I G G + L + + +R Sbjct: 300 VLAALDWQGPVYEVSAIKGEGTDALCGDLMNYLEELR 336 >gi|88608525|ref|YP_506329.1| GTPase ObgE [Neorickettsia sennetsu str. Miyayama] gi|123491962|sp|Q2GDW7|OBG_NEOSM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|88600694|gb|ABD46162.1| GTP-binding protein Obg/CgtA [Neorickettsia sennetsu str. Miyayama] Length = 341 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 144/305 (47%), Positives = 206/305 (67%), Gaps = 1/305 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE KV++++G+GG G SFRREKF+EFGGPDGG GG GG+V NLNTL+D+R Sbjct: 1 MKFIDEVKVFLKAGNGGDGCSSFRREKFVEFGGPDGGCGGDGGNVIFITDENLNTLLDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ H KA++G+ G K N+ G G D+V VP+GTQ+ +D + L+ DL+Q Q I A G Sbjct: 61 HRVHLKAENGKPGRKSNKRGESGSDLVCKVPIGTQILTQDRV-LLSDLEQPKQSFISAFG 119 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FK+S N+A G G+EK + L LK++ADIG+IGLPNAGKSTFL+ + Sbjct: 120 GKGGRGNATFKNSLNRAATEFTCGEPGEEKTVILNLKILADIGLIGLPNAGKSTFLSRCS 179 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPF+TL P +GI K E ++ADIPGII+ AH+ G+G +FLKH ER L Sbjct: 180 NAKPKIADYPFSTLEPIVGIAKINNHEIVIADIPGIIEGAHKNLGLGVKFLKHIERCKAL 239 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 ++++ E+++ + Y + +ELS Y+ +L K + +++ D + D + K + + Sbjct: 240 IYLIDGTEKDIYSVYTLLSNELSLYSKKLEIKEHFILITKSDLLGKDEVQEKCQYIREKT 299 Query: 301 GQVPF 305 G++ Sbjct: 300 GKLTL 304 >gi|86132144|ref|ZP_01050740.1| GTP-binding protein [Dokdonia donghaensis MED134] gi|85817478|gb|EAQ38658.1| GTP-binding protein [Dokdonia donghaensis MED134] Length = 332 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 146/322 (45%), Positives = 212/322 (65%), Gaps = 3/322 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K++ SG+GG+G REKFIE GGPDGG GGRGG + ++ SNL TLI +++ Sbjct: 6 FVDYVKIHTTSGNGGSGSAHLHREKFIEKGGPDGGDGGRGGHIIVRGNSNLWTLIHLKFK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H +A HG G K +G GED + VP+GT + + + ++ ++ ++GQ I A GG Sbjct: 66 RHLRAGHGGNGAKSRSTGLDGEDTYIDVPLGTTIKDTETDKVLFEITEDGQEFIAAEGGM 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSSTNQ P YA PGI G E + L+LK++AD+G++G PN GKST LAS+T A Sbjct: 126 GGRGNWHFKSSTNQTPRYAQPGIDGYEVSLTLELKVLADVGLVGFPNVGKSTLLASITAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLGIV+ Y+ F++ADIPGII+ A +G GIG RFL+H ER LL Sbjct: 186 KPKIANYEFTTLKPNLGIVEYRDYRSFVMADIPGIIEGASEGRGIGHRFLRHIERNSTLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A +++ Y+ +L+EL YN E+ K ++ +++ D +D + A EL + Sbjct: 246 FMIPADADSISEQYEILLNELKKYNPEMLDKSRMIAITKSDMLDDELKAELSEELDREL- 304 Query: 302 QVPFEF-SSITGHGIPQILECL 322 +P+ F S++ G+ ++ + L Sbjct: 305 PIPYLFISAVAQQGLIELKDAL 326 >gi|193211829|ref|YP_001997782.1| GTPase ObgE [Chlorobaculum parvum NCIB 8327] gi|261266723|sp|B3QRD8|OBG_CHLP8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|193085306|gb|ACF10582.1| GTP-binding protein Obg/CgtA [Chlorobaculum parvum NCIB 8327] Length = 335 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 148/328 (45%), Positives = 218/328 (66%), Gaps = 10/328 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D AK+ +++GDGG G +SFRREKF+ GGPDGG GGRGG V+++A L+TL+DF+ Sbjct: 1 MKFVDSAKISVKAGDGGRGCVSFRREKFVPKGGPDGGDGGRGGHVYLRANRQLSTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ + A GE GM +SG G DVV+ VP GT V + ++CD+ ++GQ I++A G Sbjct: 61 YRKSYIAGRGEHGMGARKSGKNGNDVVIGVPCGTVVRNAETGEVLCDMVEDGQEIMIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF ++T QAP +A PG G E + ++LKL+AD+G++G PNAGKST ++ + Sbjct: 121 GRGGQGNQHFATATRQAPRFAQPGEKGDEIELEMELKLMADVGLVGFPNAGKSTLISVFS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLGIV+ + YK F++ADIPGII+ A +G G+G +FL+H +RT Sbjct: 181 AARPKIADYPFTTLVPNLGIVRYDDYKSFVMADIPGIIEGAAEGRGLGIQFLRHIQRTKT 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LL +V + ++ A Y +L EL +++ L K + ++++D D A + E + Sbjct: 241 LLVMVPSDSADIAAEYATLLRELEKFDASLLSKPRLAVITKMDIAPED-FAIPELEPGIK 299 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIF 327 SS+ G G L+ L D+++ Sbjct: 300 V----IAISSVAGQG----LKALKDELW 319 >gi|298528416|ref|ZP_07015820.1| GTP-binding protein Obg/CgtA [Desulfonatronospira thiodismutans ASO3-1] gi|298512068|gb|EFI35970.1| GTP-binding protein Obg/CgtA [Desulfonatronospira thiodismutans ASO3-1] Length = 339 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 151/335 (45%), Positives = 228/335 (68%), Gaps = 7/335 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA++ RSG GG G +SFRRE+FI GGPDGG GG GG ++++A L TL DF+ Sbjct: 1 MRFVDEAEITARSGKGGDGCVSFRRERFIPRGGPDGGDGGEGGSLYVEADPGLLTLYDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVF--EEDGISLICDLDQEGQRIILA 118 ++ F AQ+G GM R R G G+D+V+ +PVGTQV+ +EDG SL+ DL GQR++LA Sbjct: 61 RKRLFAAQNGRPGMGRQRFGRSGDDLVIYLPVGTQVYSMQEDGESLLADLVHPGQRVLLA 120 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GN HFKSST +AP +A PG G E + L+LK++AD G++GLPNAGKST L+ Sbjct: 121 QGGRGGKGNTHFKSSTMRAPRFAQPGEEGVELRLKLRLKVLADAGLLGLPNAGKSTLLSR 180 Query: 179 VTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 ++ A+PKI YPFTT+ PNLG++++ + ++ADIPG+I AHQG G+GDRFLKH ERT Sbjct: 181 ISAARPKIGSYPFTTINPNLGVLRDQRDTQMVVADIPGLISGAHQGRGLGDRFLKHVERT 240 Query: 238 HVLLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 L+HI+S + ++ + +Q + EL Y+ EL + +++ L++ D + D L + Sbjct: 241 RFLVHILSVEDIDLDSPWQGFEILNQELEKYSPELASREQVLVLNKTDLLSRDELDKLGR 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 + +V + S++ G G+ ++++ + ++ + + Sbjct: 301 AVEAYEYRV-YLISALEGTGVEKLVQDMWERFYRL 334 >gi|313886209|ref|ZP_07819939.1| Obg family GTPase CgtA [Porphyromonas asaccharolytica PR426713P-I] gi|332299691|ref|YP_004441612.1| GTPase obg [Porphyromonas asaccharolytica DSM 20707] gi|312924388|gb|EFR35167.1| Obg family GTPase CgtA [Porphyromonas asaccharolytica PR426713P-I] gi|332176754|gb|AEE12444.1| GTPase obg [Porphyromonas asaccharolytica DSM 20707] Length = 379 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 151/326 (46%), Positives = 212/326 (65%), Gaps = 5/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y+RSG GG G FRREK+I GGPDGG GGRGG ++I+A N TL+ RY Sbjct: 7 FVDYVKIYLRSGKGGRGSAHFRREKYIPKGGPDGGDGGRGGSIYIEANQNYWTLLHLRYN 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A++GE G + ++GA D+V+ VP GT V + I D+ Q G+R +L PGG Sbjct: 67 RHIIAENGEAGSAKLQTGADAPDIVIEVPCGTSVHDATTGEFILDVSQHGERHLLLPGGR 126 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK+STNQAP YA PG QE+++ L+LK +AD+G++GLPNAGKST LA+++ A Sbjct: 127 GGKGNNFFKTSTNQAPRYAQPGEPSQERLVVLQLKTLADVGLVGLPNAGKSTLLAALSAA 186 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADYPFTTL PNLG+V + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 187 KPKIADYPFTTLQPNLGMVSYRDNRSFVMADIPGIIEGAAEGRGLGLRFLRHIERNSILL 246 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V ++ A Y+ + EL YN L K I+ +++ID DS+ + L Sbjct: 247 FMVPIDSPDIIAEYRMLCRELEEYNPGLIDKRHILAITKIDLADSELIDLVSETLPE--- 303 Query: 302 QVPFEF-SSITGHGIPQILECLHDKI 326 +VP F S++ G+ ++ + + +I Sbjct: 304 EVPTIFISAVAQRGLTELKDLIWREI 329 >gi|187250513|ref|YP_001874995.1| GTP-binding protein Obg/CgtA [Elusimicrobium minutum Pei191] gi|261266783|sp|B2KAW2|OBG_ELUMP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|186970673|gb|ACC97658.1| GTP-binding protein Obg/CgtA [Elusimicrobium minutum Pei191] Length = 458 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 148/322 (45%), Positives = 215/322 (66%), Gaps = 7/322 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M FLD K+Y+++G GG G +SFRREKFIEFGGP+GG+GG+GGDV+I+ NL TL++ Sbjct: 1 MSFLDRVKIYVKAGKGGDGCLSFRREKFIEFGGPNGGNGGKGGDVYIKTERNLTTLLELA 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y H +A++GEKG N++G +D+ + VP GT + ++DG +I DL +EGQ +++A G Sbjct: 61 YNPHIEAKNGEKGGTYNKTGVGADDLTIYVPCGT-IVKKDG-EIIADLTEEGQSVLVAKG 118 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN FK+ +N AP + G G+E ++L+LK++AD+G++G PNAGKSTFL+ V+ Sbjct: 119 GRGGRGNQSFKTHSNTAPRISEIGQPGEEITLYLELKVLADLGLVGFPNAGKSTFLSRVS 178 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL PNLGI F++ADIPGII+ A +G G+G +FLKH ERT VL Sbjct: 179 AARPKIADYPFTTLNPNLGIAMHKKVSFVIADIPGIIEGASEGKGLGHQFLKHIERTRVL 238 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH+V + + + + + I EL ++ EL KK I+ L++ D ++ + K Sbjct: 239 LHLVDPMGFKDIDAVESVKVIEKELKTFDRELAKKPRIIALNKADLPEAKEVYNKIV--K 296 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 F S+ TG G+ ++L Sbjct: 297 KYKKHKVFLISAATGEGVDKVL 318 >gi|310827276|ref|YP_003959633.1| GTP-binding protein Obg/CgtA [Eubacterium limosum KIST612] gi|308739010|gb|ADO36670.1| GTP-binding protein Obg/CgtA [Eubacterium limosum KIST612] Length = 426 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 147/322 (45%), Positives = 223/322 (69%), Gaps = 6/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+A++Y+ +G+GG GG+SFRREK++ GGPDGG+GGRGG+V +QA + L TL+ F+Y+ Sbjct: 2 FVDQAQIYVTAGNGGHGGMSFRREKYVPNGGPDGGNGGRGGNVIVQANNGLRTLLAFKYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA+ G G +G GED+++ VPVGT V ++ ++CDL ++G+ I+A GG Sbjct: 62 KKYKAESGGNGTGGRSTGKSGEDLLIKVPVGTVVKDKTTGRILCDLSEDGESCIVAQGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +F +ST QAP +A G+ GQE+ + L+LKL+AD+G++G PN GKSTFL+ VT A Sbjct: 122 GGLGNMNFSTSTRQAPRFAQGGVKGQERTLVLELKLLADVGLLGFPNVGKSTFLSMVTAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTT+ PNLG+ + Y F++ADIPGII+ AH+G G+G +FL+H ERT +L+ Sbjct: 182 KPKIANYHFTTIVPNLGVAAWKDYDPFVIADIPGIIEGAHEGTGLGIQFLRHVERTKLLI 241 Query: 242 HIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H++ A + A ++ I +EL YN L +++++V L++ D + D + L +E Sbjct: 242 HMLDASGSEGRDPLADFKAINEELKEYNERLAQRMQVVALNKTDLIADPEELELLVSEFE 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 +V F S+ TG GI +L Sbjct: 302 AMGYEV-FPISAATGKGIDALL 322 >gi|296135001|ref|YP_003642243.1| GTP-binding protein Obg/CgtA [Thiomonas intermedia K12] gi|295795123|gb|ADG29913.1| GTP-binding protein Obg/CgtA [Thiomonas intermedia K12] Length = 358 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 154/333 (46%), Positives = 225/333 (67%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +G+GG G +SFRREKFI FGGP+GG GGRGG V +A NLNTL+DFR Sbjct: 1 MKFVDEVVIEAHAGNGGNGCVSFRREKFIPFGGPNGGDGGRGGHVIARADVNLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + + ++GE G ++ GA G+D VL +PVGT +F+ + LI DL Q+GQ II+A G Sbjct: 61 FSKLHRGRNGEHGRGADQYGAGGDDKVLRMPVGTLIFDAETDELIADLVQDGQEIIIARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + G G+ + + L+LK++AD+G++G+PNAGKST +++V+ Sbjct: 121 GQGGLGNLHFKSSVNRAPRESTKGQEGEHRKLRLELKVLADVGLLGMPNAGKSTLISAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTLYPNLG+V+ G + F++ADIPG+I+ A +G G+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLYPNLGVVRLGPGRSFVIADIPGLIEGAAEGQGLGHQFLRHLQRTKL 240 Query: 240 LLHIV--SALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL-ARKKN 294 LLHIV + +EE + I+ EL Y+++L K + L+++D + D A KN Sbjct: 241 LLHIVDMAPIEEGADPVKDVRAIVAELKKYDADLAAKPRWLVLNKLDLLPEDERDAAVKN 300 Query: 295 ELATQCGQVP-FEFSSITGHGIPQILECLHDKI 326 L + P F S++ G+ +L + + I Sbjct: 301 LLRRLRYKGPVFPISALAREGLDPLLHAIAEHI 333 >gi|148653399|ref|YP_001280492.1| GTPase ObgE [Psychrobacter sp. PRwf-1] gi|261277690|sp|A5WFV1|OBG_PSYWF RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|148572483|gb|ABQ94542.1| GTP-binding protein Obg/CgtA [Psychrobacter sp. PRwf-1] Length = 402 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 154/326 (47%), Positives = 219/326 (67%), Gaps = 9/326 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA V +++GDGG G +SFRREK++ GGPDGG GG+GGDV++ A N NTL+D+R Sbjct: 1 MRFIDEAIVTVKAGDGGNGIVSFRREKYVPRGGPDGGDGGKGGDVFVVADDNTNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + + A GE G +N SG +++ L VP+GT + + +I DL + GQ +++A G Sbjct: 61 YTRRYDAGRGENGHSKNCSGKGADNIYLRVPIGTTIVNNETGEVIGDLTEIGQELLIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSSTNQAP A G G+ K + +LK++AD+G+IGLPNAGKSTF+ V+ Sbjct: 121 GDGGLGNTHFKSSTNQAPRKATSGFEGELKELKFELKVVADVGLIGLPNAGKSTFIRQVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V G ++ F++ADIPG+I+ A +GAG+G RFLKH RT Sbjct: 181 SAKPKVADYPFTTLVPNLGVVDVGVHRSFVMADIPGLIEGASEGAGLGIRFLKHVARTRR 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKN 294 LLHI+ + V+ + IL+EL ++ EL +I+ L++ID V D+D L Sbjct: 241 LLHILDIKPIDGSDPVENG-RVILNELERFSPELANLPQILILNKIDQVPDADELNELCL 299 Query: 295 ELATQCGQV--PFEFSSITGHGIPQI 318 + + G F S++TG G+ + Sbjct: 300 HIVAELGWTGAVFRTSTLTGAGVDDV 325 >gi|52629966|gb|AAU28707.1| GTP-binding protein, GTP1/Obg family [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 399 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 141/288 (48%), Positives = 204/288 (70%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G +SFRREKFI GGPDGG GG GG ++ +A+S+LNTLIDFR Sbjct: 59 MKFVDEALIKVEAGKGGNGCLSFRREKFIPRGGPDGGDGGDGGSIYFEASSDLNTLIDFR 118 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +KA++G+ GM N +G KG+D+ + VPVGT V++ D L+ D+ Q G +++A G Sbjct: 119 YTRQYKAENGQSGMGGNCTGKKGDDLTIKVPVGTMVYDADTGELLADISQPGIPVLIAQG 178 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN +KSS N++P PG G+ + + L+L+++AD+G++GLPNAGKST + +V+ Sbjct: 179 GFHGLGNTRYKSSVNRSPRQTTPGSPGESRNLRLELRVLADVGLLGLPNAGKSTLIRAVS 238 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +K K+ADYPFTTL+P LG+V+ YK F++ADIPG+I+ A QGAG+G RFLKH RT V Sbjct: 239 SSKAKVADYPFTTLHPGLGVVRVSPYKSFVMADIPGLIEGAAQGAGLGHRFLKHLSRTCV 298 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH++ + A + IL+EL+ YN +L K + L++ID + Sbjct: 299 LLHVIDIAPLDGSDPVADAKAILNELTQYNPDLLNKPRWLVLNKIDML 346 >gi|195952847|ref|YP_002121137.1| GTP-binding protein Obg/CgtA [Hydrogenobaculum sp. Y04AAS1] gi|261266835|sp|B4U7P8|OBG_HYDS0 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|195932459|gb|ACG57159.1| GTP-binding protein Obg/CgtA [Hydrogenobaculum sp. Y04AAS1] Length = 327 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 148/327 (45%), Positives = 212/327 (64%), Gaps = 11/327 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D A++ +++GDGG GG+ F REK+ +GGP GG GG+GG V +QA S+ T +DF+ Sbjct: 1 MNFIDIAQIKVKAGDGGNGGVYFLREKYRPYGGPAGGDGGKGGSVILQADSSKTTFLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++HF AQ+GE G +N+ G G+D+V+ VPVGT V ++ ++CDL + GQ ++A G Sbjct: 61 YKRHFVAQNGEHGKPKNQHGKNGKDIVIKVPVGTIVIDKKTNDVLCDLVKHGQSCVVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNAHF + TNQ P G G+EK + L LK IADI I+GLPN GKST L +T Sbjct: 121 GDGGLGNAHFATPTNQTPRKFTHGKKGEEKELILILKTIADIAIVGLPNVGKSTLLLVLT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PKIADYPFTTLYP LG++K K F +ADIPGII+NAH+GAG+G FLKH ER+ L Sbjct: 181 NAHPKIADYPFTTLYPELGVIKTDDKSFTIADIPGIIENAHKGAGLGLDFLKHIERSKYL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN-----E 295 + + EN ++ ++ E+ Y+ L +K++ + +++D +A+K+N + Sbjct: 241 VLAIDLSSENPVKDFEILITEIYLYDKSLIQKVKTIVGTKLD------IAKKENLELLEK 294 Query: 296 LATQCGQVPFEFSSITGHGIPQILECL 322 LA + SS TG I + E + Sbjct: 295 LAKEKSLDFIPVSSTTGQNIEYLKEYI 321 >gi|296160518|ref|ZP_06843334.1| GTP-binding protein Obg/CgtA [Burkholderia sp. Ch1-1] gi|295889267|gb|EFG69069.1| GTP-binding protein Obg/CgtA [Burkholderia sp. Ch1-1] Length = 373 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 154/333 (46%), Positives = 221/333 (66%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVIAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+D+ L +PVGT + + + LI DL + Q + +A G Sbjct: 61 YAKKHLARNGENGRGADCYGKGGDDITLRMPVGTTITDMETGELIADLTEHNQSVQIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF+ASV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMVRLELKVLADVGLLGMPNAGKSTFIASVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ G + F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLAPNLGVVRVGPSRSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV + +E+V A + I++EL Y+ L +K + L+++D V D + + Sbjct: 241 LLHIVDLAPFDESVDPVAEAKAIVNELRKYDELLYEKPRWLVLNKLDMVPEDEREARVSA 300 Query: 296 LATQCGQ--VPFEFSSITGHGIPQILECLHDKI 326 G FE S++TG G + + D I Sbjct: 301 FIEGFGWDGPVFEISALTGQGCENLCYAVFDHI 333 >gi|192360477|ref|YP_001980983.1| GTPase ObgE [Cellvibrio japonicus Ueda107] gi|261266719|sp|B3PIU9|OBG_CELJU RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|190686642|gb|ACE84320.1| GTP1/OBG family [Cellvibrio japonicus Ueda107] Length = 398 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 209/311 (67%), Gaps = 11/311 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G +SFR+EKF+ GGPDGG GG GG V++ A NLNTLID+R Sbjct: 1 MKFVDEAPISVEAGKGGNGALSFRKEKFVAKGGPDGGDGGDGGSVFLVADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q ++A+ GEKG +N +GAKG+D++L VPVGT V + D + DL + GQR+ +A G Sbjct: 61 FQPKYRAEDGEKGASKNCTGAKGDDLLLPVPVGTTVIDMDTEEVFGDLTEHGQRLKVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+ P PG G+++ + L+LK++AD+G++GLPNAGKS+F+ +V+ Sbjct: 121 GFHGLGNTRFKSSTNRVPRKTTPGTEGEKRNLKLELKVLADVGMLGLPNAGKSSFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+VK + ++ F++ADIPG+I+ A +GAG+G RFLKH R + Sbjct: 181 SAKPKVADYPFTTLVPNLGVVKVQQHRSFVIADIPGLIEGASEGAGLGVRFLKHLTRCRL 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V N + I +EL ++ L + + L++ID + D E+ Sbjct: 241 LLHMVDMAPVDGSNPVDNVRVIANELQKFSPTLSNRDRWLLLNKIDLLPID-------EV 293 Query: 297 ATQCGQVPFEF 307 +C V E Sbjct: 294 EARCAAVVKEL 304 >gi|294339018|emb|CAZ87365.1| GTPase involved in cell partioning and DNA repair [Thiomonas sp. 3As] Length = 354 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 154/333 (46%), Positives = 225/333 (67%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +G+GG G +SFRREKFI FGGP+GG GGRGG V +A NLNTL+DFR Sbjct: 1 MKFVDEVVIEAHAGNGGNGCVSFRREKFIPFGGPNGGDGGRGGHVIARADVNLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + + ++GE G ++ GA G+D VL +PVGT +F+ + LI DL Q+GQ II+A G Sbjct: 61 FSKLHRGRNGEHGRGADQYGAGGDDKVLRMPVGTLIFDAETDELIADLVQDGQEIIIARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + G G+ + + L+LK++AD+G++G+PNAGKST +++V+ Sbjct: 121 GQGGLGNLHFKSSVNRAPRESTKGQEGEHRKLRLELKVLADVGLLGMPNAGKSTLISAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTLYPNLG+V+ G + F++ADIPG+I+ A +G G+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLYPNLGVVRLGPGRSFVIADIPGLIEGAAEGQGLGHQFLRHLQRTKL 240 Query: 240 LLHIV--SALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL-ARKKN 294 LLHIV + +EE + I+ EL Y+++L K + L+++D + D A KN Sbjct: 241 LLHIVDMAPIEEGADPVKDVRAIVAELKKYDADLAAKPRWLVLNKLDLLPEDERDAAVKN 300 Query: 295 ELATQCGQVP-FEFSSITGHGIPQILECLHDKI 326 L + P F S++ G+ +L + + I Sbjct: 301 LLRRLRYKGPVFPISALAREGLDPLLHAIAEHI 333 >gi|320160728|ref|YP_004173952.1| GTP-binding protein [Anaerolinea thermophila UNI-1] gi|319994581|dbj|BAJ63352.1| GTP-binding protein [Anaerolinea thermophila UNI-1] Length = 419 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 146/318 (45%), Positives = 210/318 (66%), Gaps = 1/318 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DEA + +R G GG G + F REK++ GGPDGG GGRGG+V ++ LNTL+ FRY+ Sbjct: 2 FVDEAIIKVRGGRGGDGMVHFHREKYVPHGGPDGGDGGRGGNVVLEVKPTLNTLVAFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + AQ G +G N SG D+++ VP GT V + + L+ DL Q GQR+I+A GG Sbjct: 62 DRYHAQDGARGGPNNMSGKSAPDLIIPVPPGTVVMDAETGELLGDLTQPGQRLIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + +NQ P A G G+E+I+ L+LKLIAD+GI+G+PNAGKS+ LA+VT A Sbjct: 122 GGRGNQHFATPSNQVPKMAEKGEPGEERILRLELKLIADVGIVGVPNAGKSSLLAAVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADYPFTTL PNLG+ + + +LADIPG+I+ AHQG G+GD FL+H +RT VL+ Sbjct: 182 RPKIADYPFTTLEPNLGVAELDINTTLVLADIPGLIEGAHQGVGLGDAFLRHIQRTRVLI 241 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 H++ L E+ A Y I EL+ ++ +L +K ++V L++ID + + + G Sbjct: 242 HLLDGLSEDPLADYSQINTELALFDEKLAEKPQLVALNKIDLPEVQERWPEIQKQLRNHG 301 Query: 302 QVPFEFSSITGHGIPQIL 319 P+ S++ G+ ++L Sbjct: 302 VEPYAISALARTGVKELL 319 >gi|293602317|ref|ZP_06684763.1| Spo0B-associated GTP-binding protein [Achromobacter piechaudii ATCC 43553] gi|292819079|gb|EFF78114.1| Spo0B-associated GTP-binding protein [Achromobacter piechaudii ATCC 43553] Length = 379 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 155/340 (45%), Positives = 218/340 (64%), Gaps = 11/340 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G SFRREKFI GGPDGG GGRGG ++ A N+NTLIDFR Sbjct: 1 MKFVDEATIEVVAGKGGNGVASFRREKFIPKGGPDGGDGGRGGTIYAVADRNINTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A+ GE G ++ GA D+ L VPVGT + + + ++ D+D Q+++LA G Sbjct: 61 YARLHRAKGGENGRGSDQYGAAAPDITLRVPVGTVIHDAETGEVLFDMDTHDQKVVLAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP PG G+ + + ++LK++AD+G++GLPNAGKST + ++ Sbjct: 121 GQGGMGNIHFKSSLNRAPRQWTPGKEGEHRYLRMELKVLADVGLLGLPNAGKSTLITRIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G FL+H RT V Sbjct: 181 NAKPKIADYPFTTLHPNLGVVRTSPSRSFVVADIPGLIEGASEGAGLGHLFLRHLARTRV 240 Query: 240 LLHI--VSALEENVQAAYQCILD------ELSAYNSELRKKIEIVGLSQIDTV-DSDTLA 290 LLH+ VS + + Q ++D EL Y+ EL K + L+++D V D + Sbjct: 241 LLHLVDVSTPDPDADPVEQAVVDARAIVEELRRYDPELAAKPRWLVLNKLDMVPDPEDTK 300 Query: 291 RKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 R+ EL G V F S +TG G +L L D + + R Sbjct: 301 RRFLELYDWKGPV-FAISGLTGEGTQDLLYALQDYLDAER 339 >gi|104780058|ref|YP_606556.1| GTPase ObgE [Pseudomonas entomophila L48] gi|261277683|sp|Q1IF13|OBG_PSEE4 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|95109045|emb|CAK13741.1| ribosomal biogenesis protein ObgE [Pseudomonas entomophila L48] Length = 407 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 144/291 (49%), Positives = 206/291 (70%), Gaps = 4/291 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +++GDGG G +SFRREKFIE GGP+GG GG GG V++ A NLNTL+D+R Sbjct: 1 MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSVYMVADENLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +H +AQ G G + +G KG+D+ L VPVGT V + +I DL GQ++++A G Sbjct: 61 YTRHHEAQRGSNGGSTDCTGKKGDDLFLRVPVGTTVIDASTQEVIGDLITPGQKLMVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G ++ + +++K++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTTPGKPGDQRDLKMEMKVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A +GAG+G RFLKH RT V Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSVDRWKSFVIADIPGLIEGASEGAGLGIRFLKHLARTRV 240 Query: 240 LLHIV--SALEENVQA-AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + L+ + A A + I++EL+ ++ L + + L++ D + D Sbjct: 241 LLHLVDLAPLDGSSPADAAEIIINELAQFSPALVDRERWLVLNKADMIMDD 291 >gi|113460394|ref|YP_718456.1| GTPase ObgE [Haemophilus somnus 129PT] gi|123131945|sp|Q0I1P5|OBG_HAES1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|112822437|gb|ABI24526.1| GTP-binding protein [Haemophilus somnus 129PT] Length = 392 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 153/332 (46%), Positives = 225/332 (67%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + I +GDGG G +SFRREKFI GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRIEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F A+ GE G + +G +G+D+ L VPVGT+ + D ++ DL + G ++++A G Sbjct: 61 FEKRFAAERGENGRSSDCTGRRGKDITLRVPVGTRAIDNDTKEVLGDLTKHGTKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNARFKSSVNRAPRQKTNGTPGEKRDLQLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+ + + + F++ADIPG+I+ A +GAG+G RFLKH ER HV Sbjct: 181 AAKPKVADYPFTTLVPSLGVTRVDTSRSFVIADIPGLIEGASEGAGLGVRFLKHLERCHV 240 Query: 240 LLHIV--SALEENVQAAYQCILD-ELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNE 295 L+H+V + ++E+ A I++ EL Y+ +L K + ++IDT+ D + AR KN Sbjct: 241 LIHLVDIAPIDESDPADNIAIIEGELFQYSEKLANKPRWLVFNKIDTLSDEEATARAKNI 300 Query: 296 LATQCGQVPFEF-SSITGHGIPQILECLHDKI 326 + G+ + S+ TG + + + D I Sbjct: 301 MQRLGGEDDYYLISAATGKNVDVLCRDIMDFI 332 >gi|158320779|ref|YP_001513286.1| GTP-binding protein Obg/CgtA [Alkaliphilus oremlandii OhILAs] gi|261266647|sp|A8MHK8|OBG_ALKOO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|158140978|gb|ABW19290.1| GTP-binding protein Obg/CgtA [Alkaliphilus oremlandii OhILAs] Length = 430 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 146/328 (44%), Positives = 216/328 (65%), Gaps = 4/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK+Y+++G GG G ++FRRE ++ GGP GG GG+GG++ Q + TL+DFRYQ Sbjct: 2 FIDKAKIYLKAGKGGDGAVAFRREIYVPAGGPAGGDGGKGGNIIFQVDEGMRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+ A++GE G RN G G D+VL VP GT V EE+ +I DL ++++A GG Sbjct: 62 KHYSAENGEDGKNRNMYGKDGTDLVLKVPPGTIVREENTGEIIADLTGSEDQVVVARGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+HFKSS QAP +A G GQE + L+LKLIAD+G++G PN GKST L+ VT A Sbjct: 122 GGKGNSHFKSSVRQAPRFAIAGERGQELTVVLELKLIADVGLVGFPNVGKSTLLSVVTSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V+ + + F+LADIPG+I+ AH+G G+G FL+H ERT +L+ Sbjct: 182 KPKIANYHFTTLTPNLGVVRTKFGDSFVLADIPGLIEGAHEGTGLGHEFLRHVERTKLLI 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+ V+ LE + ++ I EL YN +L +K ++V ++ D ++ K + + Sbjct: 242 HVLDVAGLEGRDPLEDFEKINQELHLYNEKLAEKPQVVAANKTDIPGAEDNLEKLKAVLS 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKI 326 + G F S+ T G+ ++L + ++ Sbjct: 302 ERGIEVFPISAATSQGLDELLSYVSKRL 329 >gi|329117982|ref|ZP_08246695.1| GTP-binding protein Obg/CgtA [Neisseria bacilliformis ATCC BAA-1200] gi|327465870|gb|EGF12142.1| GTP-binding protein Obg/CgtA [Neisseria bacilliformis ATCC BAA-1200] Length = 382 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 141/289 (48%), Positives = 205/289 (70%), Gaps = 5/289 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GGRGG V+ +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGRGGNGATSFRREKFVPRGGPDGGDGGRGGSVYAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+ L +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAENGEKGHGSDRYGAGADDITLKMPVGTLIRDIDTGEIVADLTHHGQRVCLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGEARSLMLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIADYPFTTLHPNLGVVRLDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH+V + +E A + I++EL Y+ EL K + L+++D + Sbjct: 241 LLHVVDLAPFDEETDPAAEALAIINELRKYDEELFDKPRWLVLNKLDML 289 >gi|323703599|ref|ZP_08115243.1| GTP-binding protein Obg/CgtA [Desulfotomaculum nigrificans DSM 574] gi|323531432|gb|EGB21327.1| GTP-binding protein Obg/CgtA [Desulfotomaculum nigrificans DSM 574] Length = 424 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 160/323 (49%), Positives = 220/323 (68%), Gaps = 8/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+Y++ GDGG G I+ RREK++ FGGP GG GGRGGDV +A LNTLIDFRY+ Sbjct: 2 FYDRAKIYVKGGDGGNGCIAMRREKYVPFGGPWGGDGGRGGDVIFKADQGLNTLIDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM +N +GA G+D+V+ VP GT V E + +I DL ++GQ++++A GG Sbjct: 62 KHFKADKGQNGMGKNMNGAAGKDLVVRVPAGTVVREAETGRVIADLVEDGQQVVVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S TN+AP A G G+E+ + L+LKLIAD+G+IG PNAGKSTF++ V+ A Sbjct: 122 GGRGNVHFASGTNKAPRIAEKGEPGEERWLELELKLIADVGLIGFPNAGKSTFISMVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADYPFTTL PNLG+V G + F+LADIPG+I+ A QG G+G FL+HTERT +L+ Sbjct: 182 KPKIADYPFTTLVPNLGVVSVGLDRSFVLADIPGLIEGAAQGIGLGHEFLRHTERTRLLI 241 Query: 242 HIV-SALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQIDTVD--SDTLARKKNEL 296 H+V +A E + I EL Y+ +L ++ +I+ +++D + LAR K E Sbjct: 242 HMVDTAGTEGRDPVEDIKIINRELELYDPKLAQRPQIIAANKMDIQPQAEENLARIKAEF 301 Query: 297 ATQCGQVPFEFSSITGHGIPQIL 319 + P S+ T G+ +I+ Sbjct: 302 GDKYEIYP--ISAATNRGLDKII 322 >gi|262376045|ref|ZP_06069276.1| obg family GTPase CgtA [Acinetobacter lwoffii SH145] gi|262309139|gb|EEY90271.1| obg family GTPase CgtA [Acinetobacter lwoffii SH145] Length = 405 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 151/337 (44%), Positives = 222/337 (65%), Gaps = 16/337 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + + +GDGG G SFRREKF+ FGGPDGG GGRGG ++IQA + +TL+D+R Sbjct: 1 MRFVDEAVITVEAGDGGNGVASFRREKFVPFGGPDGGDGGRGGSIYIQADDDTSTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + ++A+ + G N +G GED VL VPVGT + + + +I DL ++GQR+ +A G Sbjct: 61 YTRKYRAERAKNGRGANCAGRGGEDTVLKVPVGTTIVDVESGDIIGDLIEDGQRVKVAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSSTN++P G G+ + I L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GDGGLGNTHFKSSTNRSPRKCTHGQKGEFREIRLELKVLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTT+ PNLG+V + ++ F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTMVPNLGVVDADSHRSFVMADIPGLIEGASEGAGLGIRFLKHLARTRI 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHIV + + I+ EL ++ L K ++ L+++D + +T + E Sbjct: 241 LLHIVDVQPIDGSDPAHNAKAIMKELENFSPTLSKLPIVLVLNKVDQLAEET----REEW 296 Query: 297 ATQC-------GQVPFEFSSITGHGIPQILECLHDKI 326 T G V FE S +T G ++ L D+I Sbjct: 297 CTHILEELQWEGPV-FETSGLTAEGTKDVVYYLMDQI 332 >gi|9864207|gb|AAG01349.1|AF292383_3 GTP-binding protein [Burkholderia pseudomallei] Length = 372 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 150/333 (45%), Positives = 222/333 (66%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +G G G S RREKF+ FGGPDGG GG GG V++ A N+NTLID+ Sbjct: 1 MKFIDEARIEVIAGRRGDGSASMRREKFVPFGGPDGGDGGPGGSVYVIADRNINTLIDYP 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ A++GE G + G G+D+ L +PVGT + + D LI DL + Q++++A G Sbjct: 61 VREKHMARNGENGRGSDCYGKGGDDITLRMPVGTVINDMDTGELIADLTEHDQKVLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPGKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E V A + I+ EL Y+ L +K + L+++D V D + + Sbjct: 241 LLHLVDLAPFDERVDPVAEARAIVGELRKYDESLYEKPRWLVLNKLDMVPEDERRARVAD 300 Query: 296 LATQCGQV--PFEFSSITGHGIPQILECLHDKI 326 + G FE S++TG G ++ +HD + Sbjct: 301 FIERFGWTGPVFEISALTGQGCEGLVYAIHDYL 333 >gi|241763803|ref|ZP_04761849.1| GTP-binding protein Obg/CgtA [Acidovorax delafieldii 2AN] gi|241366935|gb|EER61340.1| GTP-binding protein Obg/CgtA [Acidovorax delafieldii 2AN] Length = 363 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 150/330 (45%), Positives = 225/330 (68%), Gaps = 9/330 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + I +GDGG G +SFR EK+ EFGGP+GG GGRGG V+ A NLNTL+DFR Sbjct: 1 MKFVDEAYIDISAGDGGNGCVSFRHEKYKEFGGPNGGDGGRGGHVFAVADPNLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + ++A+ GE GM + GA G D+ L +PVGT + + + ++ +L G+ I +A G Sbjct: 61 YSRRYEAKRGEHGMGSDMFGAAGSDITLKMPVGTIISDAETGEVLYELLTPGEVITIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKS+ N+AP PG G++K + L+LK++AD+G++G+PNAGKSTF+A+V+ Sbjct: 121 GDGGFGNLRFKSAINRAPRQKTPGWPGEKKNLKLELKVLADVGLLGMPNAGKSTFIAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G ++ F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVGPEQSFVVADIPGLIEGASEGAGLGHQFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E V Q I+ EL Y+ +L K + L+++D V ++ + + Sbjct: 241 LLHVVDLAPFDEGVDPVAQAKAIVGELKKYDQQLYDKPRWLVLNKLDMVPAEERPARVQD 300 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECL 322 + G V FE S++T G ++ + Sbjct: 301 FVKRFKWKGPV-FEISALTREGCEPLIHAI 329 >gi|91776569|ref|YP_546325.1| GTPase ObgE [Methylobacillus flagellatus KT] gi|123254027|sp|Q1GZ53|OBG_METFK RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|91710556|gb|ABE50484.1| Small GTP-binding protein domain [Methylobacillus flagellatus KT] Length = 353 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 146/333 (43%), Positives = 224/333 (67%), Gaps = 9/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +FRREK+ GGP+GG GGRGG +++ A N+NTL+D+R Sbjct: 1 MKFIDEATIKVYAGDGGNGVATFRREKYEAMGGPNGGDGGRGGSIYMIADRNINTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+AQ GE G ++ GA GED+VL VPVGT V ++ ++ DL + GQ++++A G Sbjct: 61 YTRVFRAQRGENGRGSDQYGASGEDMVLRVPVGTVVSDKATGQVLTDLAEHGQKVMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP G G+E ++L+LK++AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GKGGLGNIHFKSSVNRAPRQCTKGDPGEEFELYLELKVLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL+PNLG+V+ + + F++AD+PG+I+ A +GAG+G +FL+H RT + Sbjct: 181 AAKPKVADYPFTTLHPNLGVVRVDANRSFVIADVPGLIEGAAEGAGLGHQFLRHLSRTRL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E+V + I +EL Y+ L K + L+++D ++ +K E Sbjct: 241 LLHLVDLAPFDESVDPVREALAITEELRKYDEALYNKPRWLVLNKVDMLEDSE--QKVAE 298 Query: 296 LATQCGQ--VPFEFSSITGHGIPQILECLHDKI 326 + G F S++ G G ++ + + + Sbjct: 299 FVQRLGWQGRYFAISALAGIGCRELTYAIMEHV 331 >gi|78189826|ref|YP_380164.1| GTPase ObgE [Chlorobium chlorochromatii CaD3] gi|123579241|sp|Q3APF4|OBG_CHLCH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|78172025|gb|ABB29121.1| Small GTP-binding protein domain [Chlorobium chlorochromatii CaD3] Length = 338 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 155/335 (46%), Positives = 224/335 (66%), Gaps = 12/335 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D A V++++GDGG G +SFRREKF+ GGPDGG GGRGG VW++ S+L TL+DF+ Sbjct: 1 MKFVDSASVFVQAGDGGRGCVSFRREKFVPKGGPDGGDGGRGGHVWLETNSHLTTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+ + A+ G G ++G G +VV+ VP GT V +I DL ++ Q+I++A G Sbjct: 61 YKNKYIAERGVHGQGARKTGKDGVEVVIQVPCGTIVRNAATGEVIADLTEDAQKILIARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF +ST+QAP +A PG G+E + L+LKL+AD+G++G PNAGKST ++ V+ Sbjct: 121 GRGGRGNQHFATSTHQAPRHAEPGQKGEEFTLDLELKLMADVGLVGFPNAGKSTLISVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLGIV+ + YK F++ADIPGII+ A +G G+G +FL+H ERT V Sbjct: 181 AARPKIADYPFTTLVPNLGIVRYDDYKSFVMADIPGIIEGAAEGRGLGLQFLRHIERTKV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L +++ +++A YQ IL EL +++ L +K IV ++++D D LA Q Sbjct: 241 LAILIAVDSPDIEAEYQTILGELEKFSATLLQKPRIVVITKMDVTD--------EPLALQ 292 Query: 300 CG--QVP-FEFSSITGHGIPQILECLHDKIFSIRG 331 Q P F S++ G G+ ++ + L I + R Sbjct: 293 LAGEQTPIFAISAVAGQGLKELKDALWRIIVAERA 327 >gi|319795460|ref|YP_004157100.1| GTP-binding protein obg/cgta [Variovorax paradoxus EPS] gi|315597923|gb|ADU38989.1| GTP-binding protein Obg/CgtA [Variovorax paradoxus EPS] Length = 358 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 150/336 (44%), Positives = 229/336 (68%), Gaps = 13/336 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + I +GDGG G +SFR EK+ EFGGP+GG GGRGG V+ A SNLNTL+DFR Sbjct: 1 MKFVDEAFIDIAAGDGGNGCVSFRHEKYKEFGGPNGGDGGRGGHVFAVADSNLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A+ GE GM + GA G+D+ L VPVGT + + + ++ +L EG+ I +A G Sbjct: 61 YSRRHEAKRGEHGMGSDMFGAAGDDITLKVPVGTIISDAETGEVLYELLTEGEVITIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKS+ N+AP PG G++K + L+LK++AD+G++G+PNAGKST +++++ Sbjct: 121 GDGGFGNMRFKSAINRAPRQKTPGWPGEKKSLKLELKVLADVGLLGMPNAGKSTLISAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P+IADYPFTTL+PNLG+V+ G ++ F++AD+PG+I+ A +GAG+G FL+H +RT + Sbjct: 181 NARPRIADYPFTTLHPNLGVVRVGPEQSFVVADLPGLIEGASEGAGLGHLFLRHLQRTRL 240 Query: 240 LLHIV------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 LLH+V A++ QA + I+ EL Y++ L K + L+++D V D A Sbjct: 241 LLHVVDMAPFDDAIDPVAQA--KAIVGELKKYDAALYDKPRWLVLNKLDMVPGDERAALV 298 Query: 294 NELATQC---GQVPFEFSSITGHGIPQILECLHDKI 326 + + G V FE S++T G +++ ++ ++ Sbjct: 299 KDFVKRLRFKGPV-FEISALTREGCEHLVQAVYQQV 333 >gi|108759348|ref|YP_629728.1| GTPase ObgE [Myxococcus xanthus DK 1622] gi|123074567|sp|Q1DC95|OBG_MYXXD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|108463228|gb|ABF88413.1| GTP-binding protein Obg/CgtA [Myxococcus xanthus DK 1622] Length = 485 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 152/340 (44%), Positives = 222/340 (65%), Gaps = 9/340 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE ++++++GDGG G +SFRREK+IE GGP+GG GG GG V A L TL+D+R Sbjct: 1 MKFVDEVRIFVKAGDGGNGAVSFRREKYIERGGPNGGDGGNGGSVVFVADPQLTTLLDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQH +A++GE GM + +G ED+VL VPVGT V + + L+ DL + GQR + A G Sbjct: 61 YQQHHRARNGEHGMGSDCNGRAAEDMVLKVPVGTLVKDANTGELLVDLSEAGQRWVAAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN +F +ST Q P +A G G+E + L+LKL+AD+G++G PNAGKSTF++ V+ Sbjct: 121 GRGGLGNMNFATSTRQTPRFAQDGTKGEELTLRLELKLLADVGLLGFPNAGKSTFISRVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE---FILADIPGIIKNAHQGAGIGDRFLKHTERT 237 RA+PK+ADYPFTTL PNLG+V+ YK+ F++ADIPGII+ A +G G+G +FL+H ER Sbjct: 181 RARPKVADYPFTTLVPNLGMVQ--YKDGLSFVMADIPGIIEGASEGVGLGHQFLRHVERC 238 Query: 238 HVLLHIVSALEENVQAA----YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 VL+H++ E A + + EL Y+ EL K ++V +++D D+ Sbjct: 239 KVLIHLIDMGAEGEGRAPLHDFDVLNAELGKYSPELASKPQVVAANKLDLPDAQARLEGF 298 Query: 294 NELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 E + G + S TG G+ +++ + + +F+ R E Sbjct: 299 TEALRERGIRVYPVSCATGEGMQPLMDSVAEVLFTGRTEK 338 >gi|332289490|ref|YP_004420342.1| GTPase ObgE [Gallibacterium anatis UMN179] gi|330432386|gb|AEC17445.1| GTPase ObgE [Gallibacterium anatis UMN179] Length = 388 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 149/332 (44%), Positives = 217/332 (65%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTL+D+R Sbjct: 1 MKFIDEALIRVEAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLIADENLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F A GE G N +G +G D+ L VPVGT+ + D +I DL + ++++A G Sbjct: 61 FEKRFAAGRGENGRSSNCTGHRGNDITLRVPVGTRAVDNDTKEIIGDLTEHNMKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTNGTPGEKRDLQLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDANRSFVIADIPGLIEGASEGAGLGTRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V L E + I EL Y+ +L K + ++IDT+ + ++ E+ Sbjct: 241 LIHLVDILPIDESDPADNIAIIETELFQYSEKLADKPRWLVFNKIDTLSDEEAQQRAAEI 300 Query: 297 ATQCG--QVPFEFSSITGHGIPQILECLHDKI 326 A + G + S+ TG +P ++ + D I Sbjct: 301 AERIGWNNDYYLISAATGRNVPDLVREVMDFI 332 >gi|83816128|ref|YP_445311.1| GTPase ObgE [Salinibacter ruber DSM 13855] gi|123529022|sp|Q2S3C0|OBG_SALRD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|83757522|gb|ABC45635.1| GTPase of unknown function subfamily, putative [Salinibacter ruber DSM 13855] Length = 339 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 148/336 (44%), Positives = 221/336 (65%), Gaps = 4/336 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+ + + SGDGG G +++RREK++ GGP GG GG GG V+++A NL TL+D Sbjct: 1 MKFLDQVDLRVSSGDGGKGVVAWRREKYVPKGGPSGGDGGDGGSVYVEADENLYTLMDLS 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + A+ GE G +R ++GA GED V+ VP GT V + G ++ ++ + GQRI +A G Sbjct: 61 HNTQVFAEDGEPGGRREQTGASGEDKVIRVPPGTVVKTQTG-EVLGEVVEPGQRICVAEG 119 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FKSSTNQAP + PG G+E+ + +LKL+AD+G++G PNAGKST ++SV+ Sbjct: 120 GQGGRGNAFFKSSTNQAPRESQPGEPGEERDLTFELKLMADVGLVGFPNAGKSTLVSSVS 179 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P++ADYPFTTL P LG+V Y+ F++ADIPGII++AH+G G+G +FL+H ERT V Sbjct: 180 AAEPEVADYPFTTLTPQLGMVYVSEYETFVMADIPGIIEDAHEGKGLGLQFLRHIERTSV 239 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LL ++ +++ Y+ +L EL ++ + L K +V LS+ID + D A + +A + Sbjct: 240 LLFVIPITSQDLGEEYEALLHELESHEASLLDKPRVVALSKIDILAPDERALLPDVVADE 299 Query: 300 -CGQVP-FEFSSITGHGIPQILECLHDKIFSIRGEN 333 VP S++ G+ Q+ L D + S + + Sbjct: 300 FPDDVPLLPISAVADVGLDQLKYTLFDTVHSTQSAD 335 >gi|113477535|ref|YP_723596.1| GTPase ObgE [Trichodesmium erythraeum IMS101] gi|123351867|sp|Q10XA1|OBG_TRIEI RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|110168583|gb|ABG53123.1| GTP1/OBG subdomain [Trichodesmium erythraeum IMS101] Length = 352 Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 141/323 (43%), Positives = 220/323 (68%), Gaps = 3/323 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ + +G GG G ++FRREKF+ GGP GG+GGRGG V + A +NL TL+DF+ Sbjct: 1 MQFIDQAEIQVEAGKGGDGMVAFRREKFVPAGGPAGGNGGRGGSVVLVAVANLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ FKA++G++G +N +GA G D ++ VP GT +++ + L+ DL + GQ +A G Sbjct: 61 FQRVFKAENGKRGGPKNMTGAGGSDRLIEVPPGTMIYDRETEELLGDLVKPGQTCCVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S++N+AP YA PG+ G+ +++ L+LKL+A++GIIGLPNAGKST +A+++ Sbjct: 121 GKGGLGNKHFLSNSNRAPEYALPGLDGEVRMLRLELKLLAEVGIIGLPNAGKSTLIAALS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V++ + + ADIPG+I+ A G G+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRKPTGDGTVFADIPGLIEGASAGLGLGHEFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD--TLARKKNELA 297 LLH+V + + ++ I +EL Y L K +++ L+++D VD + N Sbjct: 241 LLHLVDITDVDPVENFETIQNELEVYGRSLEDKRQVLALNKVDAVDVKGAEIQELVNRFR 300 Query: 298 TQCGQVPFEFSSITGHGIPQILE 320 G F S++ G G+ ++++ Sbjct: 301 EISGGKVFLISAVAGIGLEELMQ 323 >gi|119502967|ref|ZP_01625052.1| predicted GTPase [marine gamma proteobacterium HTCC2080] gi|119461313|gb|EAW42403.1| predicted GTPase [marine gamma proteobacterium HTCC2080] Length = 399 Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 143/325 (44%), Positives = 218/325 (67%), Gaps = 8/325 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G+GG G +SFRREK+I FGGPDGG GG GG V + ++LNT+ID+R Sbjct: 1 MKFVDEATIEVFAGNGGGGCVSFRREKYIPFGGPDGGDGGDGGSVILLGDASLNTMIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+A+ G G RN +G GED+ L VP+GT + +ED ++ D+ + GQ +++A G Sbjct: 61 YTRKFRAEAGSSGKGRNCTGKAGEDLTLPVPIGTTILDEDTGEVLGDIREAGQELLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N++P ++PG G+ + + L+LK++AD+G++GLPNAGKST + +V+ Sbjct: 121 GFHGLGNTRFKSSVNRSPRQSSPGSAGENRRLKLELKVLADVGLLGLPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTL P+LG+VK + Y+ F++ADIPG+I+ A +GAG+G RFLKH R + Sbjct: 181 AATPKVADYPFTTLIPSLGVVKVDSYRSFVVADIPGLIEGASEGAGLGIRFLKHLTRNRI 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V E + A I+ EL ++ L + + L+++D +D LA +K + Sbjct: 241 LLHLVDIAPLDESDPSEAAVSIVRELERFSPTLASRPRWLILNKVDLIDETLLAERKAAV 300 Query: 297 ATQ---CGQVPFEFSSITGHGIPQI 318 + G V +E S+++ G ++ Sbjct: 301 LSALNWTGPV-YEISALSREGTRRL 324 >gi|149927155|ref|ZP_01915412.1| GTP1/OBG subdomain [Limnobacter sp. MED105] gi|149824094|gb|EDM83315.1| GTP1/OBG subdomain [Limnobacter sp. MED105] Length = 371 Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 150/338 (44%), Positives = 224/338 (66%), Gaps = 13/338 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G SFRREKFI GGPDGG GG+GG V+ +A NLNTLID+R Sbjct: 1 MKFIDEATIEVFAGKGGNGSGSFRREKFIPKGGPDGGDGGKGGSVFAEADRNLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + +A+ GE G + GA G D+VL +PVGT + + ++ DL + GQ++++A G Sbjct: 61 FSKQHRAKGGENGRGSDCYGAAGPDIVLKMPVGTTIVNAETGLVVADLTEHGQQVLIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSS N+AP G G L+LK++AD+G++G+PNAGKST +A+V+ Sbjct: 121 GDGGLGNIHFKSSVNRAPRQFTKGKDGDSARYKLELKVLADVGLLGMPNAGKSTLIAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G+ + F++AD+PG+I+ A +GAG+G +FLKH RT V Sbjct: 181 NARPKIADYPFTTLHPNLGVVRIGHAQSFVIADVPGLIEGAAEGAGLGHQFLKHLSRTRV 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + ++NV Y+ I++EL Y+ +L K + L++ID + + K ++ Sbjct: 241 LLHLVDLAPFDDNVDPVYEAAAIVEELRKYDEDLWAKPRWLVLNKIDMIAEEDRKAKIDD 300 Query: 296 LATQC-------GQVPFEFSSITGHGIPQILECLHDKI 326 T+ GQV SS+TG ++ +++ + Sbjct: 301 FVTRYREKTGWQGQV-HPISSLTGENTANLMRSVYENL 337 >gi|29653734|ref|NP_819426.1| GTPase ObgE [Coxiella burnetii RSA 493] gi|154706610|ref|YP_001425017.1| GTPase ObgE [Coxiella burnetii Dugway 5J108-111] gi|212213115|ref|YP_002304051.1| GTPase ObgE [Coxiella burnetii CbuG_Q212] gi|81629467|sp|Q83ED8|OBG_COXBU RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266807|sp|B6J1S8|OBG_COXB2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266808|sp|A9KEJ7|OBG_COXBN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|29540997|gb|AAO89940.1| GTP-binding protein (probably involved in DNA repair) [Coxiella burnetii RSA 493] gi|154355896|gb|ABS77358.1| GTP-binding protein (probably involved in DNA repair) [Coxiella burnetii Dugway 5J108-111] gi|212011525|gb|ACJ18906.1| GTP-binding protein CgtA [Coxiella burnetii CbuG_Q212] Length = 339 Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 151/301 (50%), Positives = 214/301 (71%), Gaps = 6/301 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA V + +G+GG G +SFRREKFI GGPDGG GG GG V+ A ++NTL++FR Sbjct: 1 MKFVDEAFVRVEAGNGGHGCLSFRREKFIPRGGPDGGDGGDGGSVYFVADKSVNTLVEFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ+ +AQ+G+ GM R RSG KGED+++ VP+GT V++++ LI DL + G ++ +A G Sbjct: 61 YQRLLRAQNGQPGMGRLRSGKKGEDLIVPVPLGTTVYDKETSELIGDLIEAGDKLCVARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN HFKSSTN+AP G G+ + + L+LKL+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GRHGLGNTHFKSSTNRAPRRTTSGEEGEARELKLELKLLADVGLLGLPNAGKSTFIHAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +A PKIADYPFTTLYP+LG+V+ E Y+ F++ADIPG+I+ A +GAG+G +FLKH ERT + Sbjct: 181 KATPKIADYPFTTLYPHLGVVRVEEYRSFVIADIPGLIEGASEGAGLGVQFLKHLERTQL 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV + VQ + Q I+ EL ++ L +K + ++ID + D + E Sbjct: 241 LLHIVDIAPLDGSDPVQ-SIQAIISELEQFSQNLSQKPRWLVFNKIDLLPPDVAQARCQE 299 Query: 296 L 296 + Sbjct: 300 I 300 >gi|187925419|ref|YP_001897061.1| GTPase ObgE [Burkholderia phytofirmans PsJN] gi|261266706|sp|B2SYV2|OBG_BURPP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|187716613|gb|ACD17837.1| GTP-binding protein Obg/CgtA [Burkholderia phytofirmans PsJN] Length = 373 Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 154/333 (46%), Positives = 220/333 (66%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVIAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+D+ L +PVGT + + + LI DL + Q + +A G Sbjct: 61 YAKKHLARNGENGRGADCYGKGGDDITLRMPVGTTITDMETGELIADLTEHNQSVQIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF+ASV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMVRLELKVLADVGLLGMPNAGKSTFIASVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G + F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPSRSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV + ++ V A + I++EL Y+ L +K + L+++D V D + + Sbjct: 241 LLHIVDLAPFDDAVDPVAEAKAIVNELRKYDELLYEKPRWLVLNKLDMVPEDEREARVSA 300 Query: 296 LATQCGQ--VPFEFSSITGHGIPQILECLHDKI 326 G FE S++TG G + + D I Sbjct: 301 FLEGFGWDGPVFEISALTGQGCENLCYAVFDHI 333 >gi|150025425|ref|YP_001296251.1| GTPase ObgE [Flavobacterium psychrophilum JIP02/86] gi|261266792|sp|A6GZB7|OBG_FLAPJ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|149771966|emb|CAL43440.1| GTP-binding protein Obg [Flavobacterium psychrophilum JIP02/86] Length = 335 Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 148/329 (44%), Positives = 212/329 (64%), Gaps = 6/329 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y+ SG GG G REKFIE GGPDGG GGRGG V++ +L TL ++ Sbjct: 6 FVDYTKIYVSSGKGGKGSTHLHREKFIEKGGPDGGDGGRGGHVYLVGEKSLWTLFHLKFA 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA HG G +G+ GED + VP+GT V +++ ++ ++ + G++ I+A GG Sbjct: 66 RHVKAGHGGDGGSSRSTGSDGEDKYIEVPLGTVVRDKETNEILFEITEHGEKRIIAEGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+SSTNQ P Y+ PG+ QE I L+LK++AD+G++G PNAGKST L+ +T A Sbjct: 126 GGLGNWHFRSSTNQTPRYSQPGLPAQEADIVLELKVLADVGLVGFPNAGKSTLLSVLTSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADYPFTTL PNLGIV Y+ F++ADIPGII+ A +G G+G FL+H ER LL Sbjct: 186 KPKIADYPFTTLKPNLGIVAYRDYQSFVIADIPGIIEGAAEGKGLGHYFLRHIERNSTLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V A ++++ Y +LDEL YN E+ K ++ +S+ D +D + K +L Sbjct: 246 FLVPADADDIKKEYDILLDELRRYNPEMLDKDRLIVVSKCDMLDEELQVEMKKQLDKDFA 305 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFSI 329 +P+ F SSI G+ + L DK++++ Sbjct: 306 GIPYLFISSIAQQGLVE----LKDKLWAM 330 >gi|298207699|ref|YP_003715878.1| GTP-binding protein [Croceibacter atlanticus HTCC2559] gi|83850336|gb|EAP88204.1| GTP-binding protein [Croceibacter atlanticus HTCC2559] Length = 333 Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 149/329 (45%), Positives = 216/329 (65%), Gaps = 6/329 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K++++SG GG G RREK+IE GGPDGG GGRGG V I+ NL TL +++ Sbjct: 6 FVDYVKLHLKSGKGGQGSAHMRREKYIEKGGPDGGDGGRGGHVIIKGNKNLWTLYHLKFK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K+ SGA GED + VP+GT + +++ ++ ++ +GQ II+A GG Sbjct: 66 RHISAGHGEHGRKQEMSGADGEDQYIDVPLGTVIRDKETEEILHEVINDGQEIIIAKGGL 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+S NQ P YA PG+ G+E + ++LK++AD+G++G PNAGKST L+ +T A Sbjct: 126 GGRGNTHFKNSVNQTPRYAQPGLEGEEIDVTVELKILADVGLVGFPNAGKSTLLSVITAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL P+LGIV+ Y+ F++ADIPGII+ A +G G+G RFL+H ER LL Sbjct: 186 KPKIANYEFTTLKPSLGIVEYRDYQTFVMADIPGIIEGAAEGKGLGHRFLRHIERNSTLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A ++ YQ +LDEL YN EL K +++ +S+ D +D + + + Sbjct: 246 FLIPADAPDIVEQYQVLLDELRRYNPELLDKDKLIAISKSDMLDEELKGELDASIKGKFN 305 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFSI 329 VP+ F SS+ G+ Q L DK++ + Sbjct: 306 NVPYLFISSVAQQGLQQ----LKDKLWQM 330 >gi|153207861|ref|ZP_01946438.1| GTP-binding protein Obg/CgtA [Coxiella burnetii 'MSU Goat Q177'] gi|165918852|ref|ZP_02218938.1| GTP-binding protein Obg/CgtA [Coxiella burnetii RSA 334] gi|212219174|ref|YP_002305961.1| GTPase ObgE [Coxiella burnetii CbuK_Q154] gi|261266806|sp|B6J9K2|OBG_COXB1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|120576287|gb|EAX32911.1| GTP-binding protein Obg/CgtA [Coxiella burnetii 'MSU Goat Q177'] gi|165917484|gb|EDR36088.1| GTP-binding protein Obg/CgtA [Coxiella burnetii RSA 334] gi|212013436|gb|ACJ20816.1| GTP-binding protein [Coxiella burnetii CbuK_Q154] Length = 339 Score = 262 bits (670), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 151/301 (50%), Positives = 214/301 (71%), Gaps = 6/301 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA V + +G+GG G +SFRREKFI GGPDGG GG GG V+ A ++NTL++FR Sbjct: 1 MKFVDEAFVRVEAGNGGHGCLSFRREKFIPRGGPDGGDGGDGGSVYFVADKSVNTLVEFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ+ +AQ+G+ GM R RSG KGED+++ VP+GT V++++ LI DL + G ++ +A G Sbjct: 61 YQRLLRAQNGQPGMGRLRSGKKGEDLIVPVPLGTTVYDKETSELIGDLIEAGDKLCVARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN HFKSSTN+AP G G+ + + L+LKL+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GRHGLGNTHFKSSTNRAPRRTTSGEEGEARELKLELKLLADVGLLGLPNAGKSTFIHAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +A PKIADYPFTTLYP+LG+V+ E Y+ F++ADIPG+I+ A +GAG+G +FLKH ERT + Sbjct: 181 KATPKIADYPFTTLYPHLGVVRVEEYRSFVIADIPGLIEGASEGAGLGVQFLKHLERTQL 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV + VQ + Q I+ EL ++ L +K + ++ID + D + E Sbjct: 241 LLHIVDIAPLDGSDPVQ-SIQAIISELEQFSQNLSQKPRWLVFNKIDLLAPDVAQARCQE 299 Query: 296 L 296 + Sbjct: 300 I 300 >gi|77747603|ref|NP_299701.2| GTPase ObgE [Xylella fastidiosa 9a5c] gi|261277909|sp|Q9PAS3|OBG_XYLFA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 357 Score = 262 bits (670), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 134/245 (54%), Positives = 182/245 (74%), Gaps = 1/245 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +G+GG G +SFRREKFI GGPDGG GG GG VW+ A NLNTL+DFR Sbjct: 1 MKFVDEAEIQVIAGNGGDGCVSFRREKFIPLGGPDGGDGGDGGSVWLVADENLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ FKAQ G GM + G G+D +++VP+GT V +I D+ + G R+++A G Sbjct: 61 HERIFKAQRGVNGMGQQMYGKAGQDKIISVPIGTVVINVQTDEVIGDMVRHGDRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP A PG G+E+ + L+LKL+ADIG++G PN GKSTF+ +V+ Sbjct: 121 GTGGLGNMHFKSSINRAPRQARPGEQGEERTLKLELKLLADIGMLGFPNVGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTLYPNLG+VK E Y F++AD+PG+I+ A G G+G +FL+H +RT + Sbjct: 181 AATPKVADYPFTTLYPNLGVVKIEAYSSFVIADVPGLIEGAADGVGLGTQFLRHLQRTKL 240 Query: 240 LLHIV 244 LLH+V Sbjct: 241 LLHMV 245 >gi|237749048|ref|ZP_04579528.1| GTPase ObgE [Oxalobacter formigenes OXCC13] gi|229380410|gb|EEO30501.1| GTPase ObgE [Oxalobacter formigenes OXCC13] Length = 368 Score = 262 bits (670), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 151/340 (44%), Positives = 232/340 (68%), Gaps = 10/340 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +G+GG G SF REKF FGGPDGG GG+GG +W+ A +N+NTLID+ Sbjct: 1 MKFIDEARIEVIAGNGGNGVASFNREKFKPFGGPDGGDGGKGGSIWVVADNNVNTLIDYH 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + ++A++GE G + G +D+VL +PVGT + + + ++I DL + GQ+ +LA G Sbjct: 61 YTKMYRAKNGENGRGSDCYGKGADDIVLHMPVGTIITDRNTGAVIADLVENGQKQLLAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HFKSSTN+AP G G+ + L+LK++AD+G++G+PNAGKSTF+++V+ Sbjct: 121 GEGGWGNIHFKSSTNRAPRQRTEGKTGERFELQLELKVLADVGLLGMPNAGKSTFISAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLQPNLGVVRVGAEKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTRL 240 Query: 240 LLHI--VSALEEN--VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+ +S +E V A + ++ EL Y+ EL +K + L+++D V + A++ + Sbjct: 241 LLHMIDISPFDEADPVHNA-KALIAELEKYDPELAQKPRWLVLNKLDLVPENERAKRVKD 299 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 L + G V FE S+ T G ++ + ++ +R E Sbjct: 300 LVKKLKYKGPV-FEISAYTKTGCSELTDAIYRYFEELRQE 338 >gi|91785270|ref|YP_560476.1| GTPase ObgE [Burkholderia xenovorans LB400] gi|123358446|sp|Q13U15|OBG_BURXL RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|91689224|gb|ABE32424.1| Putative GTP-binding protein, GTP1/Obg family [Burkholderia xenovorans LB400] Length = 373 Score = 262 bits (670), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 153/333 (45%), Positives = 221/333 (66%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVIAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+D+ L +PVGT + + + LI DL + Q + +A G Sbjct: 61 YAKKHLARNGENGRGADCYGKGGDDITLRMPVGTTITDMETGELIADLTEHNQSVQIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMVRLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ G + F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLAPNLGVVRVGPSRSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV + +E+V A + I++EL Y+ L +K + L+++D V D + + Sbjct: 241 LLHIVDLAPFDESVDPVAEAKAIVNELRKYDELLYEKPRWLVLNKLDMVPEDEREARVSA 300 Query: 296 LATQCGQ--VPFEFSSITGHGIPQILECLHDKI 326 G FE S++TG G + + D I Sbjct: 301 FIEGFGWDGPVFEISALTGQGCENLCYAVFDYI 333 >gi|332967822|gb|EGK06921.1| GTP-binding protein Obg/CgtA [Kingella kingae ATCC 23330] Length = 383 Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 141/306 (46%), Positives = 210/306 (68%), Gaps = 5/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + G GG G SFRREKF+ GGPDGG GGRGG VW A N+NTL+++R Sbjct: 1 MKFIDEAKIEVVGGKGGNGAASFRREKFVPRGGPDGGDGGRGGSVWAVADENVNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+ L +PVGT + + D ++ DL GQR+ +A G Sbjct: 61 FVKRYQAKNGEKGHGADRYGAGADDIELHMPVGTLIRDVDTDEIVADLTFHGQRVCVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+++ + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEDGEQRTLQLELKVLADVGLLGMPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKVADYPFTTLHPNLGVVRMDENNSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E A + I+ EL Y+ +L K + L+++D +D + ++ + Sbjct: 241 LLHVVDLAPFDEETDTAGEALAIIHELRKYDEDLYDKQRWLVLNKLDMLDDEEAEQRTAD 300 Query: 296 LATQCG 301 G Sbjct: 301 FLNAIG 306 >gi|301594630|ref|ZP_07239638.1| GTPase ObgE [Acinetobacter baumannii AB059] Length = 402 Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 148/329 (44%), Positives = 221/329 (67%), Gaps = 8/329 (2%) Query: 5 DEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQH 64 DEA + + +GDGG G SFRREKF+ FGGPDGG GGRGG ++IQA + +TL+D+RY + Sbjct: 1 DEAVITVEAGDGGNGVASFRREKFVPFGGPDGGDGGRGGSIYIQADDDTSTLVDYRYTRK 60 Query: 65 FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGG 124 F+A+ G+ G N +G GEDVVL VPVGT + + D +I DL ++GQR+++A GG GG Sbjct: 61 FRAERGKNGAGANCTGRGGEDVVLKVPVGTTIVDTDSGDIIGDLVEDGQRVMVASGGEGG 120 Query: 125 FGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKP 184 GN HFKSSTN+AP G G+ + I L+LK++AD+G++G+PNAGKSTF+ +V+ AKP Sbjct: 121 LGNTHFKSSTNRAPRKCTTGTKGEFREIRLELKVLADVGLLGMPNAGKSTFIRAVSAAKP 180 Query: 185 KIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHI 243 K+ADYPFTT+ PNLG+V + ++ F++ADIPG+I+ A +GAG+G RFLKH RT +LLHI Sbjct: 181 KVADYPFTTMVPNLGVVDADRHRSFVMADIPGLIEGAAEGAGLGIRFLKHLARTRILLHI 240 Query: 244 VSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ- 299 + + + I++EL+ ++ L K ++ L+++D + ++ + + Sbjct: 241 IDVQPIDGSDPAHNAKAIMNELAKFSPTLAKLPIVLVLNKLDQIAEESREEWCQHILDEL 300 Query: 300 --CGQVPFEFSSITGHGIPQILECLHDKI 326 G V F+ S + G +++ L D+I Sbjct: 301 QWTGPV-FKTSGLLEEGTKEVVYYLMDQI 328 >gi|110598605|ref|ZP_01386872.1| GTP-binding protein, HSR1-related:GTP1/OBG subdomain [Chlorobium ferrooxidans DSM 13031] gi|110339774|gb|EAT58282.1| GTP-binding protein, HSR1-related:GTP1/OBG subdomain [Chlorobium ferrooxidans DSM 13031] Length = 342 Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 148/327 (45%), Positives = 210/327 (64%), Gaps = 6/327 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D A + I +GDGG G +SFRREKF+ GGPDGG GGRGG VW++ L TL+DF+ Sbjct: 1 MKFVDSASIVIAAGDGGNGCVSFRREKFVPKGGPDGGDGGRGGHVWLKTNRQLTTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ + A G G ++G G D+V+ VP GT V + +I DL E Q ++A G Sbjct: 61 YKKKYIADRGVHGQGARKTGRDGADIVIQVPCGTLVRNAETQEVIADLTGEEQEFLIARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF + T QAP +A PG G+ ++ L+LKL+AD+G++G PNAGKST ++ ++ Sbjct: 121 GKGGKGNQHFATPTRQAPRFAEPGQKGEALVLDLELKLMADVGLVGFPNAGKSTLISVIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLGIV+ E YK F++ADIPGII+ A +G G+G +FL+H ERT + Sbjct: 181 AAKPKIADYPFTTLVPNLGIVRYEEYKSFVMADIPGIIEGASEGRGLGLQFLRHIERTKI 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L +VSA ++ A Y+ +L EL ++ L K I ++++D D E Sbjct: 241 LAVLVSADSPDITAEYKTLLGELEKFDEGLLNKPRIAVITKMDIASEDLEIPLLEE---- 296 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKI 326 G SS++GHG+ ++ + L ++ Sbjct: 297 -GVKVLPISSVSGHGLKELKDELWKEV 322 >gi|119492289|ref|ZP_01623636.1| Small GTP-binding protein domain protein [Lyngbya sp. PCC 8106] gi|119453174|gb|EAW34341.1| Small GTP-binding protein domain protein [Lyngbya sp. PCC 8106] Length = 342 Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 143/325 (44%), Positives = 214/325 (65%), Gaps = 7/325 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+ +V + +G GG G ++FRREK++ GGP GG+GG+GG V + A +L TL+D + Sbjct: 1 MQFIDQVEVLVEAGKGGDGIVAFRREKYVPAGGPSGGNGGKGGSVILVAVEHLQTLLDLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y F+A+ G +G +N +GA G D ++ VP GT V++ + ++ DL Q +A G Sbjct: 61 YNHRFRAEDGRRGGPKNMTGAMGNDRIIEVPCGTTVYDVETEEIVVDLIHPHQEFCVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAHF S+ N+AP YA PG++G+++ + L+LKL+A++GI+GLPNAGKST ++S++ Sbjct: 121 GKGGLGNAHFLSNQNRAPDYALPGLMGEQRQLRLELKLLAEVGIMGLPNAGKSTLISSLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V++ + + ADIPG+I+ AH G G+G FL+H ERT V Sbjct: 181 AAKPKIADYPFTTLIPNLGVVRKPTGDGTVFADIPGLIEGAHLGLGLGHEFLRHIERTRV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ + Y I EL AY L +IV L++ D VD+D+ + E+ TQ Sbjct: 241 LLHLIDITDPTPVENYHTIQQELQAYGRGLTDHPQIVALNKADAVDTDS--EEVQEIITQ 298 Query: 300 CGQVP----FEFSSITGHGIPQILE 320 QV F S++ G+ +++ Sbjct: 299 IQQVSQSKVFLISAVAKIGLNDLMQ 323 >gi|134300371|ref|YP_001113867.1| GTP1/OBG domain-containing protein [Desulfotomaculum reducens MI-1] gi|261266760|sp|A4J7I9|OBG_DESRM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|134053071|gb|ABO51042.1| GTP1/OBG sub domain protein [Desulfotomaculum reducens MI-1] Length = 422 Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 153/323 (47%), Positives = 212/323 (65%), Gaps = 8/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+Y++ GDGG G I+ RREK++ FGGP GG GG GGDV A LNTL DFRY+ Sbjct: 2 FYDRAKIYVKGGDGGNGCIAMRREKYVPFGGPWGGDGGHGGDVTFIADEGLNTLQDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ G GM +N +G GED+++ VP GT V E + LI DL + GQ++++A GG Sbjct: 62 KHFKAERGGHGMGKNMNGPAGEDLLVKVPTGTVVREAETGRLIADLLENGQQVVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF SS+N+AP A G G+E + L+LK+IAD+G+IG PNAGKSTF++ V+ A Sbjct: 122 GGRGNVHFASSSNKAPRIAEKGEPGEELWLELELKVIADVGLIGFPNAGKSTFISMVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADYPFTTL PNLG+V G + F+LADIPG+++ A QG G+G FL+HTERT +L+ Sbjct: 182 KPKIADYPFTTLVPNLGVVSAGEEGSFVLADIPGLVEGASQGVGLGHEFLRHTERTRLLI 241 Query: 242 HIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVD--SDTLARKKNEL 296 H+V + + I EL Y+ L + +I+ +++D + + LAR + E Sbjct: 242 HVVDTAGTEGRDPVEDIKIINRELELYDPRLSTRPQIIAANKMDIIPLAEENLARLREEF 301 Query: 297 ATQCGQVPFEFSSITGHGIPQIL 319 Q P S+ T G+ +++ Sbjct: 302 GEQFEIYP--ISAATNQGLDKVI 322 >gi|190573298|ref|YP_001971143.1| GTPase ObgE [Stenotrophomonas maltophilia K279a] gi|261263106|sp|B2FTD3|OBG_STRMK RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|190011220|emb|CAQ44830.1| putative conserved GTP-binding protein [Stenotrophomonas maltophilia K279a] Length = 350 Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 154/309 (49%), Positives = 210/309 (67%), Gaps = 8/309 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MK +DEA++ + +G+GG G I FRREKFI GGPDGG GG GG V+I+A NLNTL+DFR Sbjct: 1 MKLVDEAEIEVFAGNGGNGCIGFRREKFIPLGGPDGGDGGAGGSVYIRADENLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + FKAQ GE GM R G GED+ +TVPVGT V +I DL Q G R+++A G Sbjct: 61 HDRIFKAQRGENGMGRQAYGKGGEDLTITVPVGTVVINVATDEVIGDLTQHGDRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN++P A PG G+E+ + L+LKL+AD+G++G PNAGKST + +V+ Sbjct: 121 GRGGLGNMHFKSSTNRSPRQALPGEPGEERTLKLELKLLADVGLLGFPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTLYPNLG+VK E Y+ F++ADIPG+I+ A GAG+G +FL+H +RT + Sbjct: 181 AATPKVADYPFTTLYPNLGVVKVENYRSFVIADIPGLIEGAADGAGLGAQFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQA-----AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 LLH+V S +E V+ + I EL ++ EL +K + L++ D + D Sbjct: 241 LLHLVDISPMEGGVEGISPVEQVRAIERELEKHDPELLRKPRWLVLNKADLMFEDEAKAA 300 Query: 293 KNELATQCG 301 ++ + G Sbjct: 301 AEQIVAELG 309 >gi|152978594|ref|YP_001344223.1| GTPase ObgE [Actinobacillus succinogenes 130Z] gi|261266634|sp|A6VMU1|OBG_ACTSZ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|150840317|gb|ABR74288.1| GTP-binding protein Obg/CgtA [Actinobacillus succinogenes 130Z] Length = 391 Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 149/330 (45%), Positives = 221/330 (66%), Gaps = 6/330 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + I +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRIEAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F A+ GE G + +G +G+D+ L VPVGT+ + D ++ DL + G ++++A G Sbjct: 61 FEKRFAAERGENGRSSDCTGKRGKDITLRVPVGTRAIDHDTKEILGDLTKHGSKLLIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLQLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+ + G + F++ADIPG+I+NA +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVARVGSDRSFVVADIPGLIENASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIV--SALEENVQAAYQCILD-ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V + L+E+ A I++ EL Y+ +L K + ++IDT+ + + E+ Sbjct: 241 LIHLVDIAPLDESDPADNIAIIENELFQYSEKLADKPRWLVFNKIDTMSDEEATARVEEI 300 Query: 297 ATQCGQVP--FEFSSITGHGIPQILECLHD 324 + G F S+ TG + ++ + D Sbjct: 301 VERLGYEDNYFLISAATGKNVSELTHDIMD 330 >gi|120437202|ref|YP_862888.1| GTPase ObgE [Gramella forsetii KT0803] gi|261266822|sp|A0M5C6|OBG_GRAFK RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|117579352|emb|CAL67821.1| GTP-binding protein [Gramella forsetii KT0803] Length = 335 Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 149/329 (45%), Positives = 217/329 (65%), Gaps = 7/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+++ SG GG G REK+I GGPDGG GGRGG V ++ + NL TL +++ Sbjct: 6 FVDYVKIHVFSGKGGKGSAHLHREKYITKGGPDGGDGGRGGHVILKGSKNLWTLFHLKFK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA+HG G K+ SG++G D + VP+GT + + + +I ++ ++GQ I+A GG Sbjct: 66 RHVKAEHGGNGSKQRSSGSQGSDEYIDVPLGTVIRDTETNEIIKEITEDGQEFIVAEGGM 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSSTNQ P YA PG+ GQ+ + L+LK++AD+G++G PNAGKST L+ +T A Sbjct: 126 GGRGNWHFKSSTNQTPRYAQPGVDGQQIDVTLELKVLADVGLVGFPNAGKSTLLSVITAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLGIV+ +K F++ADIPGII+ A +G G+G RFL+H ER LL Sbjct: 186 KPKIANYEFTTLKPNLGIVEYRDFKTFVVADIPGIIEGAAEGKGLGHRFLRHIERNSTLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ + +++ Y +LDEL YN EL K +V +S+ D +D + A EL + Sbjct: 246 FLIPSDARDIKKQYDILLDELKRYNPELMDKDRLVAISKSDLLDEELKAEMAKELDKEL- 304 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFSI 329 Q+P+ F SS+ G+ + L DK++ + Sbjct: 305 QLPYIFISSVAQSGLTE----LKDKLWQM 329 >gi|172059572|ref|YP_001807224.1| GTPase ObgE [Burkholderia ambifaria MC40-6] gi|261266695|sp|B1YSU7|OBG_BURA4 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|171992089|gb|ACB63008.1| GTP-binding protein Obg/CgtA [Burkholderia ambifaria MC40-6] Length = 370 Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 164/333 (49%), Positives = 229/333 (68%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG+V+ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGNVYAIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+DV L +PVGT V + D LI DL + GQ+++LA G Sbjct: 61 YAKKHLARNGENGRGSDCYGKGGDDVTLRMPVGTVVTDMDTGELIADLTEHGQQVMLAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMLRLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT V Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPSKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGV 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL-ARKKN 294 LLH+V + +ENV A + I+ EL Y+ L +K + L+++D V D AR + Sbjct: 241 LLHLVDLAPFDENVDPVAEAKAIVGELRKYDEALYEKPRWLVLNKLDMVPEDEREARVAD 300 Query: 295 ELATQCGQVP-FEFSSITGHGIPQILECLHDKI 326 LA P FE S++TG G + ++D + Sbjct: 301 FLARFEWDGPVFEISALTGQGCEALCYAIYDYL 333 >gi|294507186|ref|YP_003571244.1| GTP-binding protein, GTP1/Obg family [Salinibacter ruber M8] gi|294343514|emb|CBH24292.1| GTP-binding protein, GTP1/Obg family [Salinibacter ruber M8] Length = 339 Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 147/336 (43%), Positives = 222/336 (66%), Gaps = 4/336 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+ + + SGDGG G +++RREK++ GGP GG GG GG V+++A NL TL+D Sbjct: 1 MKFLDQVDLRVSSGDGGKGVVAWRREKYVPKGGPSGGDGGDGGSVYVEADENLYTLMDLS 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + A+ GE G +R ++GA GED V+ VP GT V ++ G ++ ++ + GQRI +A G Sbjct: 61 HNTQVFAEDGEPGGRREQTGASGEDKVIRVPPGTVVKKQTG-EILGEVVEPGQRICVAEG 119 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FKSSTNQAP + PG G+E+ + +LKL+AD+G++G PNAGKST ++SV+ Sbjct: 120 GQGGRGNAFFKSSTNQAPRESQPGEPGEERDLTFELKLMADVGLVGFPNAGKSTLVSSVS 179 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P++ADYPFTTL P LG+V Y+ F++ADIPGII++AH+G G+G +FL+H ERT V Sbjct: 180 AAEPEVADYPFTTLTPQLGMVYVSEYETFVMADIPGIIEDAHEGKGLGLQFLRHIERTSV 239 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LL ++ +++ Y+ +L EL ++ + L K +V LS+ID + D + + +A + Sbjct: 240 LLFVIPITSQDLGEEYEALLHELESHEASLLDKPRVVALSKIDILAPDERSLLPDVVADE 299 Query: 300 -CGQVP-FEFSSITGHGIPQILECLHDKIFSIRGEN 333 VP S++ G+ Q+ L D + S + + Sbjct: 300 FPDDVPLLPISAVADLGLDQLKYTLFDTVHSTQSAD 335 >gi|218262911|ref|ZP_03477218.1| hypothetical protein PRABACTJOHN_02898 [Parabacteroides johnsonii DSM 18315] gi|218223053|gb|EEC95703.1| hypothetical protein PRABACTJOHN_02898 [Parabacteroides johnsonii DSM 18315] Length = 386 Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 153/322 (47%), Positives = 217/322 (67%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G FRREK+I GGPDGG GGRGG V+++ N TL+ +Y+ Sbjct: 6 FVDYVKIYCRSGKGGRGSSHFRREKYIPKGGPDGGDGGRGGHVYLRGNRNYWTLLHLKYE 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A +GE G + G GED V+ VP GT V++ D ICD+ ++GQ+++L GG Sbjct: 66 RHIMATNGEGGGAKRSFGKDGEDRVIEVPCGTVVYDADTGEFICDVTEDGQQVMLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+STNQAP YA PG QE+++ L+LKL+AD+G++G PNAGKST L+ V+ A Sbjct: 126 GGLGNCHFKTSTNQAPRYAQPGEPAQERMVILQLKLLADVGLVGFPNAGKSTLLSVVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTTL PNLGIV + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 KPKIANYPFTTLEPNLGIVSYRDNRSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V A ++++ Y+ +L EL YN +L+ K ++ +++ D +D + + +L Sbjct: 246 FMVPADADDIKKEYEILLGELVKYNPDLQGKSRVLAITKSDMLDEELIEALSEDLPE--- 302 Query: 302 QVPFEF-SSITGHGIPQILECL 322 VP+ F SS+TG GI ++ + L Sbjct: 303 GVPYVFISSVTGMGITELKDLL 324 >gi|28199322|ref|NP_779636.1| GTPase ObgE [Xylella fastidiosa Temecula1] gi|182682047|ref|YP_001830207.1| GTPase ObgE [Xylella fastidiosa M23] gi|81585691|sp|Q87BL2|OBG_XYLFT RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277752|sp|B2I6V6|OBG_XYLF2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|28057428|gb|AAO29285.1| GTP-binding protein [Xylella fastidiosa Temecula1] gi|182632157|gb|ACB92933.1| GTP-binding protein Obg/CgtA [Xylella fastidiosa M23] gi|307578315|gb|ADN62284.1| GTPase ObgE [Xylella fastidiosa subsp. fastidiosa GB514] Length = 357 Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 134/245 (54%), Positives = 182/245 (74%), Gaps = 1/245 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +G+GG G +SFRREKFI GGPDGG GG GG VW+ A NLNTL+DFR Sbjct: 1 MKFVDEAEIQVIAGNGGDGCVSFRREKFIPLGGPDGGDGGDGGSVWLVADENLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ FKAQ G GM + G G+D +++VP+GT V +I D+ + G R+++A G Sbjct: 61 HERIFKAQRGVNGMGQQMYGKAGQDKIISVPIGTVVINVQTDEVIGDMVRHGDRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP A PG G+E+ + L+LKL+ADIG++G PN GKSTF+ +V+ Sbjct: 121 GTGGLGNMHFKSSINRAPRQARPGEQGEERTLKLELKLLADIGMLGFPNVGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTLYPNLG+VK E Y F++AD+PG+I+ A G G+G +FL+H +RT + Sbjct: 181 AATPKVADYPFTTLYPNLGVVKIEAYSSFVIADVPGLIEGAADGVGLGMQFLRHLQRTKL 240 Query: 240 LLHIV 244 LLH+V Sbjct: 241 LLHMV 245 >gi|119512374|ref|ZP_01631458.1| Small GTP-binding protein domain protein [Nodularia spumigena CCY9414] gi|119462963|gb|EAW43916.1| Small GTP-binding protein domain protein [Nodularia spumigena CCY9414] Length = 344 Score = 261 bits (668), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 154/327 (47%), Positives = 225/327 (68%), Gaps = 7/327 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A + + +G GG G ++FRREK++ GGP GG+GGRGG V +NL TL+DFR Sbjct: 1 MQFIDQALIEVEAGKGGDGIVAFRREKYVPAGGPSGGNGGRGGSVIFVVDTNLQTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+ FKA +G +G N +GA G+D+++ +P GT V++ +L+CDL + GQR +A G Sbjct: 61 YKHLFKADNGGRGGPNNCTGANGKDLIVEIPCGTSVYDGSTGALLCDLVEPGQRFRVAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP YA PG+ G+ ++ L+LKL+A++GIIGLPNAGKST ++S++ Sbjct: 121 GKGGLGNQHFLSNRNRAPEYALPGLPGEMLVLRLELKLLAEVGIIGLPNAGKSTLISSLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V++ + + ADIPG+I+ A GAG+G FL+H ERT V Sbjct: 181 AARPKIADYPFTTLIPNLGVVRKPTGDGTVFADIPGLIEGASHGAGLGYDFLRHIERTKV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ A E+V Y+ I EL AY L K+ +I+ L++ID VD +T+ + LAT+ Sbjct: 241 LLHLIDATSEDVIGEYKTIKQELQAYGRGLAKRPQILVLNKIDAVDRETVDLEA--LATE 298 Query: 300 CGQVP----FEFSSITGHGIPQILECL 322 + F S++T G+ +L+ L Sbjct: 299 LNHLSLSPVFLISAVTRTGLEPMLQEL 325 >gi|115350540|ref|YP_772379.1| GTPase ObgE [Burkholderia ambifaria AMMD] gi|122324084|sp|Q0BIH8|OBG_BURCM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|115280528|gb|ABI86045.1| GTP1/OBG sub domain protein [Burkholderia ambifaria AMMD] Length = 370 Score = 261 bits (668), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 164/333 (49%), Positives = 229/333 (68%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG+V+ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGNVYAIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+DV L +PVGT V + D LI DL + GQ+++LA G Sbjct: 61 YAKKHLARNGENGRGSDCYGKGGDDVTLRMPVGTVVTDMDTGELIADLTEHGQQVMLAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMLRLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT V Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPSKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGV 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL-ARKKN 294 LLH+V + +ENV A + I+ EL Y+ L +K + L+++D V D AR + Sbjct: 241 LLHLVDLAPFDENVDPVAEARAIVGELRKYDEALYEKPRWLVLNKLDMVPEDEREARVAD 300 Query: 295 ELATQCGQVP-FEFSSITGHGIPQILECLHDKI 326 LA P FE S++TG G + ++D + Sbjct: 301 FLARFEWDGPVFEISALTGQGCEALCYAIYDYL 333 >gi|253998226|ref|YP_003050289.1| GTPase ObgE [Methylovorus sp. SIP3-4] gi|313200298|ref|YP_004038956.1| GTP-binding protein obg/cgta [Methylovorus sp. MP688] gi|253984905|gb|ACT49762.1| GTP-binding protein Obg/CgtA [Methylovorus sp. SIP3-4] gi|312439614|gb|ADQ83720.1| GTP-binding protein Obg/CgtA [Methylovorus sp. MP688] Length = 350 Score = 261 bits (668), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 149/337 (44%), Positives = 226/337 (67%), Gaps = 7/337 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +FRREK+ GGP+GG GGRGG ++ A N+NTL+D+R Sbjct: 1 MKFIDEATIKVYAGDGGNGVATFRREKYEPMGGPNGGDGGRGGSIYAVADRNINTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+AQ GE G ++ GA GED++L VPVGT + + ++ DL + GQ+ +LA G Sbjct: 61 YTRTFRAQRGENGRGSDQYGAGGEDLILRVPVGTVISNKATEQVLIDLAEHGQQALLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG GN HFKSS N++P G G+E ++ +LK++AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GNGGLGNIHFKSSVNRSPRQCTKGEPGEEFELYFELKVLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL+PNLG+V+ + + F++ADIPG+I+ A +GAG+G +FL+H RT + Sbjct: 181 AAKPKVADYPFTTLHPNLGVVRVDTNRSFVIADIPGLIEGAAEGAGLGHQFLRHLARTRL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKN 294 LLH+V + +E+V + I++EL Y+ L +K + L+++D + DS + Sbjct: 241 LLHLVDIAPFDESVDPVKEARAIVEELRKYDESLYQKPRWLVLNKVDMLSDSAEVVAAFV 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 G+V F S++ G G ++ + + I S+R Sbjct: 301 RDYGWEGRV-FAISALAGIGCKELTYAIMEHIESVRA 336 >gi|302879649|ref|YP_003848213.1| GTP-binding protein Obg/CgtA [Gallionella capsiferriformans ES-2] gi|302582438|gb|ADL56449.1| GTP-binding protein Obg/CgtA [Gallionella capsiferriformans ES-2] Length = 354 Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 151/336 (44%), Positives = 229/336 (68%), Gaps = 7/336 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE+K+ + +G+GG G SFRREK+I+ GGPDGG GGRGG V+ QA N+NTL+DFR Sbjct: 1 MKFIDESKIEVFAGNGGNGIASFRREKYIDKGGPDGGDGGRGGSVFAQADRNINTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + KA++GE G + G +DV+L +PVGT + + + +I DL +G+R +LA G Sbjct: 61 FARTHKARNGESGRGSDCYGKGADDVILHMPVGTVITDINSGEVIADLMHDGERALLAEG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP PG G+ + + L+LK++AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GKGGLGNIHFKSSTNRAPRQCTPGTEGETRELQLELKVLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL+PNLG+V+ + K F++ADIPG+I+ A +GAG+G +FL+H RT + Sbjct: 181 AARPKVADYPFTTLHPNLGVVRVSHEKSFVIADIPGLIEGAAEGAGLGHQFLRHLARTSL 240 Query: 240 LLHIV--SALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKN 294 LLH+V + L E + IL+EL Y+ L +K + L++ D + D D+ A + Sbjct: 241 LLHLVDIAPLYEGTSPVGEAEAILNELKKYDQALYEKPRWLLLNKSDLLEDKDSTAAQFL 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 + + +V F S+I+G G ++ + + + ++ Sbjct: 301 KEFSDYDRV-FVISAISGEGCKELTFAIMEHLLEVK 335 >gi|291327118|ref|ZP_06127057.2| Obg family GTPase CgtA [Providencia rettgeri DSM 1131] gi|291311622|gb|EFE52075.1| Obg family GTPase CgtA [Providencia rettgeri DSM 1131] Length = 400 Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 143/305 (46%), Positives = 210/305 (68%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +GDGG G +SFRREK+I GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 10 MKFVDEAKILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 69 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R +G +G+D+ + VPVGT+V + ++CD+ + QR ++A G Sbjct: 70 FEKSFRAERGQNGQSRECTGKRGQDITVKVPVGTRVRDLGTNEVLCDMTRHDQRHMVAKG 129 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + I L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 130 GFHGLGNTRFKSSVNRAPRQRTMGTKGETREILLELMLLADVGMLGMPNAGKSTFIRSVS 189 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A +GAG+G +FLKH ER V Sbjct: 190 AAKPKVADYPFTTLVPSLGVVRMDNEQSFVVADIPGLIEGAAEGAGLGIQFLKHLERCRV 249 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ E + + I+ EL Y+ +L K + ++ID + + A++ E+ Sbjct: 250 LLHLIDICPIDESDPVENAKIIISELEKYSEKLAAKPRWLVFNKIDILGEEESAQRAAEI 309 Query: 297 ATQCG 301 A G Sbjct: 310 AKAMG 314 >gi|254447366|ref|ZP_05060832.1| GTP-binding protein Obg/CgtA [gamma proteobacterium HTCC5015] gi|198262709|gb|EDY86988.1| GTP-binding protein Obg/CgtA [gamma proteobacterium HTCC5015] Length = 356 Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 148/338 (43%), Positives = 220/338 (65%), Gaps = 5/338 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG+G +SFRREKFI GGPDGG GG GG VW+ AT LNTL DFR Sbjct: 1 MKFVDEAKIKVIAGRGGSGCVSFRREKFIPLGGPDGGDGGDGGSVWLCATEGLNTLADFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ ++A+ G G +G G D+ + VPVGT V++ + I DL Q G+R+++A G Sbjct: 61 HKRTYEAESGRPGQGSQCTGHSGADIEVAVPVGTMVYDANTSEFIGDLTQPGERLLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP G G+ + + L++K++AD+G++G+PNAGKST + S++ Sbjct: 121 GFHGLGNTRFKSSTNRAPRQHTSGSEGERRQLRLEMKVLADVGLLGMPNAGKSTLIRSIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTLYPNLG+V+ + ++ F++ADIPG+I+ A GAG+G RFLKH +RT + Sbjct: 181 AAKPKVADYPFTTLYPNLGVVRADTHRSFVVADIPGLIEGAADGAGLGIRFLKHLQRTEL 240 Query: 240 LLHIVSALE--ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LLH++ E+ + IL EL Y+ +L +K + L++ D + D K + Sbjct: 241 LLHLIDVATPGEDPVVQAKAILTELGRYSEDLLEKPRWLVLNKFDLLAEDERDTMKQLIV 300 Query: 298 TQCG-QVP-FEFSSITGHGIPQILECLHDKIFSIRGEN 333 G + P F S++ G+ ++ + D + + R E Sbjct: 301 DGLGWEGPVFTISALAQDGLDTLVYDIMDHVEAQRAER 338 >gi|52355216|gb|AAU44783.1| GTP-binding protein [Bartonella vinsonii subsp. arupensis] Length = 186 Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 136/186 (73%), Positives = 159/186 (85%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+AKVYIRSGDGGAG +SFRREKFIEFGGPDGG+GGRGGDVW LNTLID+R Sbjct: 1 MKFLDQAKVYIRSGDGGAGAVSFRREKFIEFGGPDGGNGGRGGDVWAVVVDGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHF+A+ GE G RN SGAKG+D++L VPVGTQ+FEED +LICDL + GQR +LA G Sbjct: 61 YQQHFRAKTGEHGKGRNMSGAKGDDIILKVPVGTQIFEEDNETLICDLTEVGQRYLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGGFGN HF +STN+AP ANPG+ G+E+ +WL+LKLIAD G++GLPNAGKSTFLASVT Sbjct: 121 GNGGFGNLHFTTSTNRAPRRANPGLSGEERSLWLRLKLIADGGLVGLPNAGKSTFLASVT 180 Query: 181 RAKPKI 186 AKPK+ Sbjct: 181 AAKPKV 186 >gi|262196830|ref|YP_003268039.1| GTP-binding protein Obg/CgtA [Haliangium ochraceum DSM 14365] gi|262080177|gb|ACY16146.1| GTP-binding protein Obg/CgtA [Haliangium ochraceum DSM 14365] Length = 336 Score = 261 bits (667), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 147/328 (44%), Positives = 211/328 (64%), Gaps = 6/328 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA++ +++GDGG G S RRE + GGP GG GG GGDV + L+TL+D++ Sbjct: 1 MQFIDEARIQVKAGDGGNGSASMRREAHVPRGGPWGGDGGDGGDVVVAVDPQLSTLLDYK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++H+KA GE G + + G GED +L VPVGT V++++ ++ DLD R ++A G Sbjct: 61 YRRHYKAPRGEDGRTKEQYGKGGEDAILRVPVGTVVYDDETGEVLADLDAVDARCVVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFK+ NQAP A G G+ +++ L+LKL+AD+G++G P+ GKSTF+A V+ Sbjct: 121 GRGGRGNVHFKTPWNQAPRTAETGTPGETRMLRLELKLLADVGLLGFPSVGKSTFIAKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 RA+PKI DYPFTTL PNLG+V+ + ++ADIPG+I+ A +GAG+G RFL+H ERT V Sbjct: 181 RARPKIGDYPFTTLIPNLGMVRLSDERSMVIADIPGLIEGASEGAGLGHRFLRHVERTRV 240 Query: 240 LLHIVSA-----LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 LLH++ A E A + I EL+ Y EL K +IV LS+ D + L + Sbjct: 241 LLHLLEASELLGPEREPLADFDIINRELARYAPELADKPQIVALSKSDAGPAPELVAELR 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECL 322 + G S+ TG G+ ++LE L Sbjct: 301 QRFAARGIALHTVSAATGEGVRELLELL 328 >gi|228470828|ref|ZP_04055676.1| Obg family GTPase CgtA [Porphyromonas uenonis 60-3] gi|228307501|gb|EEK16506.1| Obg family GTPase CgtA [Porphyromonas uenonis 60-3] Length = 379 Score = 261 bits (667), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 149/326 (45%), Positives = 209/326 (64%), Gaps = 5/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y+RSG GG G FRREK+I GGPDGG GG GG ++I+A N TL+ RY Sbjct: 7 FVDYVKIYLRSGKGGRGSAHFRREKYIPKGGPDGGDGGHGGSIYIEANQNYWTLLHLRYN 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+ G G + ++GA D+V+ VP GT V + I D+ Q G+R +L PGG Sbjct: 67 RHIIAESGGAGGAKLQTGADAPDIVIEVPCGTSVHDATTGEFILDVSQHGERHLLLPGGR 126 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK+STNQAP YA PG QE+++ L+LK +AD+G++GLPNAGKST LA+++ A Sbjct: 127 GGKGNNFFKTSTNQAPRYAQPGEPSQERLVVLQLKTLADVGLVGLPNAGKSTLLAALSAA 186 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADYPFTTL PNLG+V + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 187 KPKIADYPFTTLQPNLGMVSYRDNRSFVMADIPGIIEGAAEGKGLGLRFLRHIERNSILL 246 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V ++ A Y+ + EL YN L K I+ +++ID DS+ + L Sbjct: 247 FMVPIDSPDITAEYRMLCRELEEYNPGLINKRHILAITKIDMADSELIDLVSETLPE--- 303 Query: 302 QVPFEF-SSITGHGIPQILECLHDKI 326 +VP F S++ G+ ++ + + +I Sbjct: 304 EVPTIFISAVAQRGLTELKDLIWREI 329 >gi|161831328|ref|YP_001596329.1| GTPase ObgE [Coxiella burnetii RSA 331] gi|261266809|sp|A9NBL5|OBG_COXBR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|161763195|gb|ABX78837.1| GTP-binding protein Obg/CgtA [Coxiella burnetii RSA 331] Length = 339 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 151/301 (50%), Positives = 214/301 (71%), Gaps = 6/301 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA V + +G+GG G +SFRREKFI GGPDGG GG GG V+ A ++NTL++FR Sbjct: 1 MKFVDEAFVRVEAGNGGHGCLSFRREKFIPRGGPDGGDGGDGGSVYFVADKSVNTLVEFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ+ +AQ+G+ GM R RSG KGED+++ VP+GT V++++ LI DL + G ++ +A G Sbjct: 61 YQRLLRAQNGQPGMGRLRSGKKGEDLIVPVPLGTTVYDKETSELIGDLIEAGDKLCVARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN HFKSSTN+AP G G+ + + L+LKL+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GRHGLGNTHFKSSTNRAPRRTISGEEGEARELKLELKLLADVGLLGLPNAGKSTFIHAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +A PKIADYPFTTLYP+LG+V+ E Y+ F++ADIPG+I+ A +GAG+G +FLKH ERT + Sbjct: 181 KATPKIADYPFTTLYPHLGVVRVEEYRSFVIADIPGLIEGASEGAGLGVQFLKHLERTQL 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV + VQ + Q I+ EL ++ L +K + ++ID + D + E Sbjct: 241 LLHIVDIAPLDGSDPVQ-SIQAIISELEQFSQNLSQKPRWLVFNKIDLLPPDVAQARCQE 299 Query: 296 L 296 + Sbjct: 300 I 300 >gi|154495020|ref|ZP_02034025.1| hypothetical protein PARMER_04066 [Parabacteroides merdae ATCC 43184] gi|154085570|gb|EDN84615.1| hypothetical protein PARMER_04066 [Parabacteroides merdae ATCC 43184] Length = 387 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 152/322 (47%), Positives = 217/322 (67%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G FRREK+I GGPDGG GGRGG V+++ N TL+ +Y+ Sbjct: 6 FVDYVKIYCRSGKGGRGSSHFRREKYIPKGGPDGGDGGRGGHVYLRGNRNYWTLLHLKYE 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A +GE G + G GED V+ VP GT V++ + ICD+ ++GQ+++L GG Sbjct: 66 RHIMATNGEGGGAKRSFGKDGEDRVIEVPCGTVVYDAETGEFICDVTEDGQKVMLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+STNQAP YA PG QE+++ L+LKL+AD+G++G PNAGKST L+ V+ A Sbjct: 126 GGLGNCHFKTSTNQAPRYAQPGEPAQERMVILQLKLLADVGLVGFPNAGKSTLLSVVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTTL PNLGIV + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 KPKIANYPFTTLEPNLGIVSYRDNRSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V A ++++ Y+ +L EL YN +L+ K ++ +++ D +D + + +L Sbjct: 246 FMVPADADDIKKEYEILLGELVKYNPDLQDKSRVLAITKSDMLDEELIEALSEDLPE--- 302 Query: 302 QVPFEF-SSITGHGIPQILECL 322 VP+ F SS+TG GI ++ + L Sbjct: 303 GVPYVFISSVTGMGITELKDLL 324 >gi|323704247|ref|ZP_08115826.1| GTP-binding protein Obg/CgtA [Thermoanaerobacterium xylanolyticum LX-11] gi|323536313|gb|EGB26085.1| GTP-binding protein Obg/CgtA [Thermoanaerobacterium xylanolyticum LX-11] Length = 427 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 155/326 (47%), Positives = 219/326 (67%), Gaps = 13/326 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+YI+SG+GG G ISFRREK++ +GGPDGG GG+GGDV N++TL+DF+Y+ Sbjct: 6 FIDSAKIYIKSGNGGNGVISFRREKYVAYGGPDGGDGGKGGDVIFITDPNISTLMDFKYK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ GE G N+ G G+D+++ VP GTQ+ +D LI DL + GQ+ I+ GG Sbjct: 66 RKYVAESGENGSGNNKYGKDGDDLIIKVPAGTQIIRDDTNELIADLAKPGQKAIVLRGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F S+T + P +A G G+E + L+LKL+AD+G++G PNAGKST LAS T A Sbjct: 126 GGRGNAKFASATLKTPRFAESGEEGKELYVRLELKLLADVGLVGFPNAGKSTLLASCTNA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIA+YPFTTLYPNLG+V K F++ADIPG+I+ AH+G G+G FLKH ERT ++LH Sbjct: 186 RPKIANYPFTTLYPNLGVVYHKGKSFVMADIPGLIEGAHKGEGLGYDFLKHIERTKLILH 245 Query: 243 IVSALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQIDTVD------SDTLARKKN 294 IV + ++ I DE+ Y+ L++ +I L++ID VD D +A+ KN Sbjct: 246 IVDVSDPMSDPIDDFKKINDEMYLYSDRLKEIPQIAVLNKIDAVDPSSINLDDLIAKMKN 305 Query: 295 ELATQCGQVPFEFSSITGHGIPQILE 320 G F+ S++TG GI +L+ Sbjct: 306 -----LGYDVFKISAMTGDGIDGLLD 326 >gi|94987064|ref|YP_594997.1| GTPase ObgE [Lawsonia intracellularis PHE/MN1-00] gi|261266847|sp|Q1MQQ1|OBG_LAWIP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|94731313|emb|CAJ54676.1| predicted GTPase [Lawsonia intracellularis PHE/MN1-00] Length = 364 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 151/338 (44%), Positives = 226/338 (66%), Gaps = 13/338 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE + + +G GG G +SFRREKFI GGP+GG GG GG++ +A S L TL DFR Sbjct: 1 MRFVDEVTISVSAGKGGNGCVSFRREKFIPKGGPNGGDGGDGGNIIFKADSRLLTLYDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEE--DGISLICDLDQEGQRIILA 118 Q+H++AQ+GE G R G KGED++L +PVGT +FE+ D + DLD+ G ++A Sbjct: 61 VQRHYRAQNGEGGKGSQRHGKKGEDLILHLPVGTIIFEQLLDKEYFLVDLDRPGVEFLIA 120 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GN HFKSST + P +A G +G+EK + L+LK++AD GIIGLPNAGKST ++ Sbjct: 121 RGGRGGKGNEHFKSSTMRTPRFAQKGEMGEEKYLRLELKILADAGIIGLPNAGKSTLISK 180 Query: 179 VTRAKPKIADYPFTTLYPNLGIVKEGY---KEFILADIPGIIKNAHQGAGIGDRFLKHTE 235 ++ A+PKIA YPFTTL PNLG++ + K +LADIPG+I+ A +G G+G +FLKH E Sbjct: 181 LSAAQPKIAAYPFTTLNPNLGVMIDNLDPDKRLVLADIPGLIEGACKGQGLGHQFLKHIE 240 Query: 236 RTHVLLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 RT L+H++S+ E+N + + +EL ++ L ++ +++ +++ID + + L+ Sbjct: 241 RTRFLIHVLSSEDIDEDNPWLGFDIVNEELKEFDHTLMQRTQLLVVNKIDVLQPEKLSHI 300 Query: 293 KNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 K ++A G++ + S+ TG GI E L D I+ ++ Sbjct: 301 K-QVAESSGKIIYFISAETGEGI----ELLVDAIWKLQ 333 >gi|332973017|gb|EGK10956.1| Spo0B-associated GTP-binding protein [Psychrobacter sp. 1501(2011)] Length = 402 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 152/326 (46%), Positives = 217/326 (66%), Gaps = 9/326 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA V +++GDGG G +SFRREK++ GGPDGG GG+GGDV + A N NTL+D+R Sbjct: 1 MRFIDEAIVTVKAGDGGNGIVSFRREKYVPRGGPDGGDGGKGGDVIVVADDNTNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + + A G+ G +N SG +++ L VP+GT + + ++ DL + GQ +++A G Sbjct: 61 YTRRYDAGRGQNGQSKNCSGKGADNIYLRVPIGTTIINNETGEVVGDLIEIGQEVLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSSTNQAP A G G+ K + +LK++AD+G+IGLPNAGKSTF+ V+ Sbjct: 121 GDGGLGNTHFKSSTNQAPRKATSGFEGELKELKFELKVVADVGLIGLPNAGKSTFIRQVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V G ++ F++ADIPG+I+ A +GAG+G RFLKH RT Sbjct: 181 SAKPKVADYPFTTLVPNLGVVDVGIHRSFVMADIPGLIEGASEGAGLGIRFLKHVARTRR 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKN 294 LLHI+ + V+ + IL+EL ++ EL +I+ L++ID V D D L Sbjct: 241 LLHILDIKPIDGSDPVENGH-VILNELERFSPELANLPQILILNKIDQVPDEDELNELCL 299 Query: 295 ELATQCGQV--PFEFSSITGHGIPQI 318 + + G F S++TG G+ + Sbjct: 300 HIVAELGWTGAVFRTSTLTGQGVDDV 325 >gi|261345172|ref|ZP_05972816.1| Obg family GTPase CgtA [Providencia rustigianii DSM 4541] gi|282566864|gb|EFB72399.1| Obg family GTPase CgtA [Providencia rustigianii DSM 4541] Length = 391 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 142/305 (46%), Positives = 212/305 (69%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +GDGG G +SFRREK+I GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFVDEAKILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R +G +G+D+ + VPVGT+V + ++CD+ + QR ++A G Sbjct: 61 FEKSFRAERGQNGQSRECTGKRGQDITVKVPVGTRVRDLGTNEVLCDMTRHEQRHMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + I L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQRTMGTKGETREILLELMLLADVGMLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A +GAG+G +FLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEQSFVVADIPGLIEGAAEGAGLGIQFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ E + + I+ EL Y+ +L +K + +++D + ++ A++ E+ Sbjct: 241 LLHLIDICPVDESDPVENAKIIVGELEKYSEKLAQKPRWLVFNKVDILGAEESAKRAAEI 300 Query: 297 ATQCG 301 A G Sbjct: 301 AKGMG 305 >gi|311109209|ref|YP_003982062.1| GTP-binding protein Obg/CgtA [Achromobacter xylosoxidans A8] gi|310763898|gb|ADP19347.1| GTP-binding protein Obg/CgtA [Achromobacter xylosoxidans A8] Length = 378 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 155/345 (44%), Positives = 223/345 (64%), Gaps = 12/345 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G SFRREKFI GGPDGG GGRGG ++ A N+NTLID+R Sbjct: 1 MKFVDEATIEVVAGKGGNGVASFRREKFIPRGGPDGGDGGRGGTIFAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A++GE G ++ GA D+ L VPVGT + + + ++ DL+Q Q+++LA G Sbjct: 61 YARLHRAKNGENGRGSDQYGAAAPDITLRVPVGTIIHDAETGEVLFDLNQHEQKVVLAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP PG G+ + + ++LK++AD+G++GLPNAGKST + ++ Sbjct: 121 GQGGMGNIHFKSSVNRAPRQWTPGKEGEHRYLRMELKVLADVGLLGLPNAGKSTLITRIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G FL+H RT V Sbjct: 181 NAKPKIADYPFTTLHPNLGVVRTSPSRSFVVADIPGLIEGASEGAGLGHLFLRHLARTRV 240 Query: 240 LLHI--VSALEENVQAAYQCILD------ELSAYNSELRKKIEIVGLSQIDTV-DSDTLA 290 LLH+ VS + + Q ++D EL Y+ EL K + L+++D V D + Sbjct: 241 LLHLVDVSTPDPDADPVEQAVVDARAIVEELRRYDPELAAKPRWLVLNKLDMVPDPEDTK 300 Query: 291 RKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 R+ EL G V F S ++G G ++ L D + + R E E+ Sbjct: 301 RRFLELYDWKGPV-FGISGLSGEGTQDLIYALQDYLDAER-EKEY 343 >gi|222109987|ref|YP_002552251.1| gtpase obge [Acidovorax ebreus TPSY] gi|261266763|sp|B9MDZ7|OBG_DIAST RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|221729431|gb|ACM32251.1| GTP-binding protein Obg/CgtA [Acidovorax ebreus TPSY] Length = 357 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 151/336 (44%), Positives = 227/336 (67%), Gaps = 9/336 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFR EK+ EFGGPDGG GGRGG V+ A NLNTL+DFR Sbjct: 1 MKFVDEAFIDVAAGDGGNGCVSFRHEKYKEFGGPDGGDGGRGGHVFAVADPNLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A+ GE G + GA G D+ L +PVGT + + D ++ +L G+ I +A G Sbjct: 61 YSRRHEAKRGEHGKGSDMFGAAGSDITLKMPVGTIISDADTGEVLFELLTPGEVITIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKS+ N+AP PG G+ + + L+LK++AD+G++G+PNAGKSTF+A+V+ Sbjct: 121 GDGGFGNMRFKSAINRAPRQKTPGWPGERRNLKLELKVLADVGLLGMPNAGKSTFIAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G ++ F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVGPEQSFVVADIPGLIEGASEGAGLGHQFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E V Q I+ EL Y++ L +K + L+++D V S+ A + + Sbjct: 241 LLHVVDLAPFDEAVDPVAQAKAIVGELKKYDAGLYEKPRWLVLNKLDMVPSEERAARVKD 300 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKIFS 328 + G V FE S++T G +++ + + + Sbjct: 301 FVKRFKWKGPV-FEISALTREGCEPLVQSIFQHVHA 335 >gi|149912270|ref|ZP_01900844.1| GTPase Obg [Moritella sp. PE36] gi|149804655|gb|EDM64711.1| GTPase Obg [Moritella sp. PE36] Length = 389 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 146/336 (43%), Positives = 223/336 (66%), Gaps = 8/336 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE ++ + +GDGG+G +SFRREK++ GGPDGG GG GG V++ A NLNTL+DFR Sbjct: 1 MKFVDETRIKVEAGDGGSGCVSFRREKYVARGGPDGGDGGDGGHVYMIADENLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + KA+ GE G ++++GA+GED+ L VPVGT+V ++D +I DL GQR ++A Sbjct: 61 FVRFHKAERGENGRAKDQTGARGEDITLRVPVGTRVADDDTGEVIADLVMHGQRQMVAKA 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +++ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKTLGTPGEVRSLRLELMLLADVGLLGLPNAGKSTFIRAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+A+YPFTTL PNLG+V G + F++ADIPG+I+ A GAG+G RFL+H ER + Sbjct: 181 AAKPKVANYPFTTLVPNLGVVSAGPERSFVVADIPGLIEGASDGAGLGIRFLRHLERCRL 240 Query: 240 LLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKK 293 ++HIV L E++ + I+ EL Y+ +L K + ++ D V +++ ++ Sbjct: 241 MVHIVDLLPEDISDPAENAKVIVSELKKYSEKLAAKTCWLVFNKTDLVLEDEANETIKRV 300 Query: 294 NELATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 E G+V + S+ +G G ++ + ++I S+ Sbjct: 301 VEAINWEGEV-YTMSASSGVGTKDLVRAMMEQIESL 335 >gi|255534890|ref|YP_003095261.1| GTP-binding protein [Flavobacteriaceae bacterium 3519-10] gi|255341086|gb|ACU07199.1| GTP-binding protein [Flavobacteriaceae bacterium 3519-10] Length = 327 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 150/327 (45%), Positives = 215/327 (65%), Gaps = 8/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K++ +SG GGAG RREK+I GGPDGG GGRGG V ++ ++ TL+ R+ Sbjct: 4 FVDYVKIHCKSGHGGAGSAHLRREKYIPKGGPDGGDGGRGGHVIMKGNAHEWTLLPLRFT 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA+ G G K +GA G+DV + VP+GT E+G +I ++ ++GQ II+ GG Sbjct: 64 RHIKAERGHNGQKNQLTGAYGDDVYINVPIGTIAKNEEG-EVIAEILEDGQEIIIMHGGK 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSSTNQ P YA PG+ G+E + +LKL+AD+G++G PNAGKST LA+V+ A Sbjct: 123 GGLGNEHFKSSTNQTPRYAQPGLPGEEGFVTFELKLLADVGLVGFPNAGKSTLLAAVSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLGIV YK F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 183 KPKIADYAFTTLTPNLGIVDYRNYKSFVMADIPGIIEGAAEGKGLGHRFLRHIERNSILL 242 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC- 300 ++ A E+ ++ + +EL +N EL K I+ +S+ D +D + K E++ + Sbjct: 243 FLIPADAEDYFQEFKILENELKEFNPELLDKDFILSISKADMLDEEL----KKEISKKFP 298 Query: 301 -GQVPFEFSSITGHGIPQILECLHDKI 326 + P FSS+T G+ ++ + + K+ Sbjct: 299 ENRQPIFFSSVTQEGLMELKDAIWKKL 325 >gi|317401222|gb|EFV81866.1| GTP-binding protein [Achromobacter xylosoxidans C54] Length = 378 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 153/345 (44%), Positives = 222/345 (64%), Gaps = 11/345 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G SFRREKFI GGPDGG GGRGG ++ A N+NTLIDFR Sbjct: 1 MKFVDEATIEVVAGKGGNGVASFRREKFIPKGGPDGGDGGRGGSIFAVADRNINTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A++GE G ++ GA D+ L VPVGT + + + ++ DL++ Q+++LA G Sbjct: 61 YARLHRAKNGENGRGSDQYGAAAPDITLRVPVGTIIHDAETGEVLFDLNRHDQKVVLAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP PG G+ + + ++LK++AD+G++GLPNAGKST + ++ Sbjct: 121 GQGGMGNMHFKSSVNRAPRQWTPGKEGEHRYLRMELKVLADVGLLGLPNAGKSTLITRIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G FL+H RT V Sbjct: 181 NAKPKIADYPFTTLHPNLGVVRTSPSRSFVVADIPGLIEGASEGAGLGHLFLRHLARTRV 240 Query: 240 LLHI--VSALEENVQAAYQCILD------ELSAYNSELRKKIEIVGLSQIDTV-DSDTLA 290 LLH+ VS + + Q ++D EL Y+ EL K + L+++D V D + Sbjct: 241 LLHLVDVSTPDPDADPVEQAVVDARAIVEELRRYDPELAAKPRWLVLNKLDMVADPEDTK 300 Query: 291 RKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 R+ EL G V F S ++G G ++ L D + + R + + Sbjct: 301 RRFIELYDWKGPV-FGISGLSGDGTQDLIYALQDYLDAEREKEQL 344 >gi|218886473|ref|YP_002435794.1| GTPase ObgE [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|261266761|sp|B8DRN9|OBG_DESVM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|218757427|gb|ACL08326.1| GTP-binding protein Obg/CgtA [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 368 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 144/330 (43%), Positives = 225/330 (68%), Gaps = 12/330 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + +R+G+GG G +SFRREKF+ GGPDGG GG GG V ++A++ L +L DFR Sbjct: 1 MRFVDEATITVRAGNGGNGCVSFRREKFVPRGGPDGGDGGDGGSVILRASNRLLSLYDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE--EDGISLICDLDQEGQRIILA 118 Q++++A +G+ GM G KG+D+ + +PVGTQ++E EDG +L+CDL ++A Sbjct: 61 LQRNYEAPNGQGGMGSQCHGRKGDDLTVELPVGTQIYEVTEDGETLLCDLSDPETVFVVA 120 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GN HFKSSTN+AP +A G G+ + + L+LK++AD G++GLPNAGKSTF++ Sbjct: 121 QGGRGGKGNEHFKSSTNRAPRFAQKGETGEVRSLRLELKILADAGLLGLPNAGKSTFISK 180 Query: 179 VTRAKPKIADYPFTTLYPNLGIV---KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTE 235 V+ A+PKIA YPFTTL PNLG++ + + ++ADIPG+I+ AH G G+G RFLKH E Sbjct: 181 VSAARPKIAAYPFTTLIPNLGVMIDDADPEQRLVIADIPGLIEGAHTGQGLGHRFLKHVE 240 Query: 236 RTHVLLHIVSALEENVQ------AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 RT L+HI+S + ++ + + I +EL ++++L +++++ +++ID D + + Sbjct: 241 RTRFLVHILSVEDVSLDSPDGPWSGFDLINEELVRFDADLGQRVQLQVVNKIDLRDPEDV 300 Query: 290 ARKKNELATQCGQVPFEFSSITGHGIPQIL 319 ++ A V F S++TG G+ ++ Sbjct: 301 QALRDRAAADGRTVHF-MSALTGEGVEDVV 329 >gi|222475320|ref|YP_002563737.1| putative GTP binding protein (hflX) [Anaplasma marginale str. Florida] gi|261266622|sp|B9KJ19|OBG2_ANAMF RecName: Full=GTPase obg 2; AltName: Full=GTP-binding protein obg 2 gi|222419458|gb|ACM49481.1| putative GTP binding protein (hflX) [Anaplasma marginale str. Florida] Length = 328 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 141/276 (51%), Positives = 198/276 (71%), Gaps = 1/276 (0%) Query: 21 ISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSG 80 +SFRREKFIEFGGPDGG+GG GG V A+S +NTL+ FRY QH +A++G+ G + + G Sbjct: 1 MSFRREKFIEFGGPDGGNGGNGGSVIFVASSAVNTLLYFRYNQHIRAENGKAGSGKGKFG 60 Query: 81 AKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYY 140 A G + V+ VPVGTQ+++EDG +LI DL+ GQ+ +A GG GG GNA +KSSTN+AP Y Sbjct: 61 AAGRNRVVEVPVGTQLYDEDGNTLIADLNNIGQQYTVAAGGRGGIGNAQYKSSTNRAPTY 120 Query: 141 ANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI 200 G LG+E + LKLK+++D+GIIG+PNAGKS+ L+ T +K K++DYPFTTL P+LG+ Sbjct: 121 FTYGTLGEEHCVLLKLKIVSDVGIIGMPNAGKSSLLSRCTASKTKVSDYPFTTLEPHLGV 180 Query: 201 VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD 260 E +LADIPG+I+NA GAG+G +FLKH ER +LLH+V ++ +AY+ + Sbjct: 181 AYANGCELVLADIPGLIENASSGAGLGHKFLKHIERCVILLHLVDCSLPDIVSAYELVRQ 240 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 EL ++ EL K E+V L++ D + S+ R+K +L Sbjct: 241 ELKLHSQELTGKQEVVILNKCDLL-SEGEVREKQKL 275 >gi|170717434|ref|YP_001783474.1| GTPase ObgE [Haemophilus somnus 2336] gi|261266826|sp|B0UVI2|OBG_HAES2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|168825563|gb|ACA30934.1| GTP-binding protein Obg/CgtA [Haemophilus somnus 2336] Length = 392 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 152/332 (45%), Positives = 224/332 (67%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + I +GDGG G +SFRREKFI GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRIEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F A+ GE G + +G +G+D+ L VPVGT+ + D ++ DL + G ++++A G Sbjct: 61 FEKSFAAERGENGRSSDCTGRRGKDITLRVPVGTRAIDNDTKEVLGDLTKHGTKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNARFKSSVNRAPRQKTNGTPGEKRDLQLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+ + + + F++ADIPG+I+ A +GAG+G RFLKH ER HV Sbjct: 181 AAKPKVADYPFTTLVPSLGVTRVDTSRSFVIADIPGLIEGASEGAGLGVRFLKHLERCHV 240 Query: 240 LLHIV--SALEENVQAAYQCILD-ELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNE 295 L+H+V + ++E+ A I++ EL Y+ +L K + ++ID + D + AR KN Sbjct: 241 LIHLVDIAPIDESDPADNIAIIEGELFQYSEKLANKPRWLVFNKIDILSDEEATARAKNI 300 Query: 296 LATQCGQVPFEF-SSITGHGIPQILECLHDKI 326 + G+ + S+ TG + + + D I Sbjct: 301 MQRLGGEDDYYLISAATGKNVDVLCRDIMDFI 332 >gi|194364899|ref|YP_002027509.1| GTPase ObgE [Stenotrophomonas maltophilia R551-3] gi|261263105|sp|B4SP14|OBG_STRM5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|194347703|gb|ACF50826.1| GTP-binding protein Obg/CgtA [Stenotrophomonas maltophilia R551-3] Length = 350 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 153/309 (49%), Positives = 210/309 (67%), Gaps = 8/309 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MK +DEA++ + +G+GG G I FRREKFI GGPDGG GG GG V+I+A NLNTL+DFR Sbjct: 1 MKLVDEAEIEVFAGNGGNGCIGFRREKFIPLGGPDGGDGGAGGSVYIRADENLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + FKAQ GE GM R G GED+ +TVPVGT + +I DL Q G R+++A G Sbjct: 61 HDRIFKAQRGENGMGRQAYGKGGEDLTITVPVGTVIINVATDEIIGDLTQHGDRLLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN++P A PG G+E+ + L+LKL+AD+G++G PNAGKST + +V+ Sbjct: 121 GRGGLGNMHFKSSTNRSPRQALPGEPGEERTLKLELKLLADVGLLGFPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTLYPNLG+VK E Y+ F++ADIPG+I+ A GAG+G +FL+H +RT + Sbjct: 181 AATPKVADYPFTTLYPNLGVVKVENYRSFVIADIPGLIEGAADGAGLGAQFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQA-----AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 LLH+V S +E V+ + I EL ++ EL +K + L++ D + D Sbjct: 241 LLHLVDISPMEGGVEGISPVEQVRAIERELEKHDPELLQKPRWLVLNKADLMFEDEAKAA 300 Query: 293 KNELATQCG 301 ++ + G Sbjct: 301 AEQIVAELG 309 >gi|56416954|ref|YP_154028.1| hypothetical protein AM858 [Anaplasma marginale str. St. Maries] gi|81599131|sp|Q5PAA7|OBG2_ANAMM RecName: Full=GTPase obg 2; AltName: Full=GTP-binding protein obg 2 gi|56388186|gb|AAV86773.1| hypothetical protein AM858 [Anaplasma marginale str. St. Maries] Length = 328 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 141/276 (51%), Positives = 198/276 (71%), Gaps = 1/276 (0%) Query: 21 ISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSG 80 +SFRREKFIEFGGPDGG+GG GG V A+S +NTL+ FRY QH +A++G+ G + + G Sbjct: 1 MSFRREKFIEFGGPDGGNGGNGGSVIFVASSAVNTLLYFRYNQHIRAENGKAGSGKGKFG 60 Query: 81 AKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYY 140 A G + V+ VPVGTQ+++EDG +LI DL+ GQ+ +A GG GG GNA +KSSTN+AP Y Sbjct: 61 AAGRNRVVEVPVGTQLYDEDGNTLIADLNNIGQQYTVAAGGRGGIGNAQYKSSTNRAPTY 120 Query: 141 ANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI 200 G LG+E + LKLK+++D+GIIG+PNAGKS+ L+ T +K K++DYPFTTL P+LG+ Sbjct: 121 FTYGTLGEEHCVLLKLKIVSDVGIIGMPNAGKSSLLSRCTASKTKVSDYPFTTLEPHLGV 180 Query: 201 VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD 260 E +LADIPG+I+NA GAG+G +FLKH ER +LLH+V ++ +AY+ + Sbjct: 181 AYANGCELVLADIPGLIENASSGAGLGHKFLKHIERCVILLHLVDCSLPDIVSAYELVRQ 240 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 EL ++ EL K E+V L++ D + S+ R+K +L Sbjct: 241 ELKLHSQELAGKQEVVILNKCDLL-SEGEVREKQKL 275 >gi|148927752|ref|ZP_01811186.1| GTP1/OBG sub domain protein [candidate division TM7 genomosp. GTL1] gi|147886895|gb|EDK72431.1| GTP1/OBG sub domain protein [candidate division TM7 genomosp. GTL1] Length = 404 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 159/330 (48%), Positives = 216/330 (65%), Gaps = 3/330 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AKV + +G+GG G +SFR E +++ GGPDGG GG GGDV A N+NTL+DFRY+ Sbjct: 2 FVDIAKVKVEAGNGGNGMVSFRHEIYVDKGGPDGGDGGGGGDVIFVADDNINTLVDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 KA++G+ G KRNR G GED+ + VPVGT + +G +LI D ++GQ+ ++A GGN Sbjct: 62 PELKAKNGQPGGKRNRHGKSGEDLEVRVPVGTTIRRVNG-ALIADFIKKGQKAVVAHGGN 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GGFGNAHFKSS QAP A G G+ L+LKL+AD+G++G PNAGKSTFL+ V+ A Sbjct: 121 GGFGNAHFKSSIRQAPRVAENGEKGEAFEALLELKLLADVGLVGFPNAGKSTFLSVVSNA 180 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +P+IADY FTTL PNLG+ ++ADIPG+I+ A QG G+G FL+H ERT VLLH Sbjct: 181 RPEIADYEFTTLTPNLGVADIDNTSLLIADIPGLIEGASQGKGLGGDFLRHVERTAVLLH 240 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC-G 301 +V A ++V AY I EL AY+ EL ++ E+V L++ + +D + + EL Sbjct: 241 LVDAYRDDVAKAYTTIRQELRAYSEELFRRPEVVALTKTEGLDGEMITFLMAELQKVVPA 300 Query: 302 QVP-FEFSSITGHGIPQILECLHDKIFSIR 330 + P F SS GI + L L K+ R Sbjct: 301 ETPLFTISSQAHQGIEEALRELRQKVDEAR 330 >gi|212709997|ref|ZP_03318125.1| hypothetical protein PROVALCAL_01048 [Providencia alcalifaciens DSM 30120] gi|212687406|gb|EEB46934.1| hypothetical protein PROVALCAL_01048 [Providencia alcalifaciens DSM 30120] Length = 391 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 142/305 (46%), Positives = 211/305 (69%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +GDGG G +SFRREK+I GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFVDEAKILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R +G +G+D+ + VPVGT+V + ++CD+ + QR ++A G Sbjct: 61 FEKSFRAERGQNGQSRECTGKRGQDITVKVPVGTRVRDLGTNEVLCDMTRHDQRHMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + I L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQRTMGTKGETREILLELMLLADVGMLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A +GAG+G +FLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEQSFVVADIPGLIEGAAEGAGLGIQFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ E + + I+ EL Y+ +L +K + +++D + + A++ E+ Sbjct: 241 LLHLIDICPIDESDPVENAKIIVGELEKYSEKLAQKPRWLVFNKVDILGEEESAKRAAEI 300 Query: 297 ATQCG 301 A G Sbjct: 301 AKGMG 305 >gi|332528437|ref|ZP_08404429.1| GTPase CgtA [Hylemonella gracilis ATCC 19624] gi|332042116|gb|EGI78450.1| GTPase CgtA [Hylemonella gracilis ATCC 19624] Length = 358 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 145/333 (43%), Positives = 226/333 (67%), Gaps = 8/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFR EK+ EFGGP+GG GGRGG V+ A NLNTL+DFR Sbjct: 1 MKFVDEALIDVAAGDGGNGCVSFRHEKYKEFGGPNGGDGGRGGHVYAVADPNLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+AQ GE GM + GA G D+ L +PVGT + + + ++ +L G+ I +A G Sbjct: 61 YTRRFEAQRGEHGMGSDMFGAAGSDITLKMPVGTLICDAETGEVLYELLTPGEVITIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKS+ N+AP PG G++K + L+LK++AD+G++GLPNAGKST + +++ Sbjct: 121 GDGGFGNLRFKSAINRAPRQKTPGWPGEKKSLKLELKVLADVGLLGLPNAGKSTLITAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ G ++ F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVGPEQSFVVADIPGLIEGASEGAGLGHQFLRHLQRTRL 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V + + A + I+ EL Y++ L +K + L+++D + + + + Sbjct: 241 LLHVVDLAPFDDSDPVAQAKAIVAELKKYDAALHEKPRWLVLNKLDMIPVEEREARVQDF 300 Query: 297 ATQC---GQVPFEFSSITGHGIPQILECLHDKI 326 + G V F+ S++T G +++ ++ ++ Sbjct: 301 VKRYKYKGPV-FQISALTHEGCDVLVKTVYKQV 332 >gi|30249270|ref|NP_841340.1| GTPase ObgE [Nitrosomonas europaea ATCC 19718] gi|81584654|sp|Q82V20|OBG_NITEU RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|30180589|emb|CAD85202.1| GTP1/OBG family [Nitrosomonas europaea ATCC 19718] Length = 343 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 149/341 (43%), Positives = 221/341 (64%), Gaps = 7/341 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE K+ I +GDGG G SFRREKFI GGPDGG GG GG ++ A NLNTLID+R Sbjct: 1 MKFIDEVKIQISAGDGGNGVASFRREKFIPRGGPDGGDGGHGGSIYALADHNLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + F+A+ GE G + G ED+VL +PVGT + + L+ DL+ + Q+++LA G Sbjct: 61 FTPVFRAKRGENGRGSDCYGKGAEDIVLRMPVGTIITNDLTGELVADLEHDQQKVLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G++ + L+L+++AD+G++GLPNAGKST + +V+ Sbjct: 121 GRGGLGNLHFKSSTNRAPRQFTHGEAGEQFELRLELRVLADVGLLGLPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTLYPNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKVADYPFTTLYPNLGVVRVDAGHSFVMADIPGLIEGAAEGAGLGHRFLKHLGRTRL 240 Query: 240 LLHI--VSALEENVQAAY--QCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+ V+ +ENV + + ++DEL ++ L +K + +++D + D Sbjct: 241 LLHVIDVAPFDENVDIVHSARALVDELRKFDETLYRKPRWLVFNKVDMLPEDEQQAVCTR 300 Query: 296 L--ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 L A + F S++TG G ++ + + ++ ++E Sbjct: 301 LLQAMNWQERWFAISALTGRGCQALIYAIMGHLQQLQSDSE 341 >gi|319786579|ref|YP_004146054.1| GTP-binding protein Obg/CgtA [Pseudoxanthomonas suwonensis 11-1] gi|317465091|gb|ADV26823.1| GTP-binding protein Obg/CgtA [Pseudoxanthomonas suwonensis 11-1] Length = 354 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 156/332 (46%), Positives = 222/332 (66%), Gaps = 12/332 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MK +DEA++ + +G+GG G + FRREKFI GGPDGG GG GG VW+ A NLNTL+DFR Sbjct: 1 MKLVDEAEIEVIAGNGGNGCVGFRREKFIPLGGPDGGDGGNGGSVWLVADENLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+AQ GE GM R G G+D+V+TVPVGT V + +I DL + G R+++A G Sbjct: 61 HERRFRAQRGENGMGRQMYGKGGDDLVITVPVGTVVTNVETDEVIGDLTRHGDRLLVARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP A PG G+++ + L+LKL+AD+G++G PNAGKSTF+ +V+ Sbjct: 121 GKGGLGNMHFKSSVNRAPRQATPGEPGEQRNLKLELKLLADVGLLGFPNAGKSTFVRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTLYPNLG+V E ++ F++ADIPG+I+ A GAG+G +FL+H +RT + Sbjct: 181 AATPKVADYPFTTLYPNLGVVSVEAHRSFVIADIPGLIEGAADGAGLGAQFLRHLQRTRL 240 Query: 240 LLHIV--SALE----ENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLA 290 LLH+V + LE E V + + I EL ++ EL K + L++ D + D Sbjct: 241 LLHLVDIAPLEGYEGEEVMSPVEQVRAIERELERHDPELLAKPRWLVLNKADLMFEDEAR 300 Query: 291 RKKNELATQCG--QVPFEFSSITGHGIPQILE 320 ++ + + G Q F S++ GI I++ Sbjct: 301 QRAEAIIAELGWTQPWFLVSALGREGIWPIMQ 332 >gi|322417684|ref|YP_004196907.1| GTP-binding protein Obg/CgtA [Geobacter sp. M18] gi|320124071|gb|ADW11631.1| GTP-binding protein Obg/CgtA [Geobacter sp. M18] Length = 338 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 154/338 (45%), Positives = 224/338 (66%), Gaps = 7/338 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+Y++SGDGGAG +SFRREKFI GGPDGG GG+GGDV ++ + +L+TL+D R Sbjct: 1 MSFIDEVKIYVKSGDGGAGCVSFRREKFIPLGGPDGGDGGKGGDVVVKVSPHLSTLLDLR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 H KA G GM +R GA G + + VP GT + + + ++ DL + I+L G Sbjct: 61 QHPHQKAGRGRNGMGSDRHGANGNTLEILVPRGTVIKDTETDEILADLTEPDSSIVLLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FK++T++AP +A PG G+E+ I L+LKL+AD+G++G+P+ GKS+ ++ ++ Sbjct: 121 GRGGQGNARFKTATHKAPKFAQPGEPGEERWIRLELKLMADVGLLGMPSVGKSSLISKIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+Y FTTL PNLG+VK + Y+ F++ADIPG+I+ A +GAG+G RFLKH ERT Sbjct: 181 AARPKIAEYHFTTLKPNLGVVKYKNYRSFVMADIPGLIEGASEGAGLGHRFLKHLERTGQ 240 Query: 240 LLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ E + A Y+ I EL+ +N EL +K + V +++ID K Sbjct: 241 LLHLLDLSWMPERDPIAEYEAINRELALFNPELAEKRQTVVINKIDLPHVRENLEKVLPY 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + G F S+ TG GIP++L+ D F++ GE E Sbjct: 301 FEERGIKVFPISAATGEGIPELLD---DIAFNLWGEPE 335 >gi|260912980|ref|ZP_05919465.1| Spo0B-associated GTP-binding protein [Pasteurella dagmatis ATCC 43325] gi|260632970|gb|EEX51136.1| Spo0B-associated GTP-binding protein [Pasteurella dagmatis ATCC 43325] Length = 390 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 148/332 (44%), Positives = 222/332 (66%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G ISFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRVEAGDGGNGCISFRREKYIPKGGPDGGDGGDGGDVYLVADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F A+ GE G N +G +G+D+ L VPVGT+ + D +I DL + G ++++A G Sbjct: 61 FEKRFAAERGENGRSANCTGHRGKDITLRVPVGTRAIDNDTKEVIGDLTKHGTKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G LG+++ + L+L L+AD+G++GLPNAGKSTF+ +++ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTNGTLGEKRDLQLELMLLADVGMLGLPNAGKSTFIRAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+ + + + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVARVDANRSFVVADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIV--SALEENVQAAYQCILD-ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V + ++E+ A I++ EL Y+ L K + ++IDT+ + ++ E+ Sbjct: 241 LVHLVDIAPIDESDPADNIGIIEAELFQYSEALADKPRWLVFNKIDTMSDEEAEQRAKEI 300 Query: 297 ATQCG--QVPFEFSSITGHGIPQILECLHDKI 326 + G + S++TG + + + D I Sbjct: 301 TERLGWEDSYYLISAVTGKNVSPLCRDIMDFI 332 >gi|187476771|ref|YP_784795.1| GTPase ObgE [Bordetella avium 197N] gi|123514846|sp|Q2L062|OBG_BORA1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|115421357|emb|CAJ47862.1| GTP-binding protein [Bordetella avium 197N] Length = 372 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 153/337 (45%), Positives = 222/337 (65%), Gaps = 13/337 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G SFRREKFI GGPDGG GGRGG ++ A N+NTLIDFR Sbjct: 1 MKFVDEATIEVIAGKGGNGVASFRREKFIPRGGPDGGDGGRGGSIFAVADRNINTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A++GE G ++ GA D+ L VPVGT V + D ++ DL++ G+ + LA G Sbjct: 61 YARLHRAKNGENGRGSDQYGAAAPDITLRVPVGTVVHDADTGEVLFDLNRHGETVTLAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP PG G+++ + L+LK++AD+G++GLPNAGKST ++ ++ Sbjct: 121 GQGGMGNIHFKSSVNRAPRQWTPGKEGEQRRLRLELKVLADVGLLGLPNAGKSTLISRIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G FL+H RT V Sbjct: 181 NARPKIADYPFTTLHPNLGVVRTSPSRSFVVADIPGLIEGASEGAGLGHLFLRHLARTRV 240 Query: 240 LLHIVSA---------LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTL 289 LLH+V +E V+ A + I++EL Y+ EL +K + L+++D V D ++ Sbjct: 241 LLHLVDVSSPDPDADPIESAVENA-RAIVEELRRYDPELAEKPRWLVLNKLDMVPDPASV 299 Query: 290 ARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ E G V F S + G G +++ L D + Sbjct: 300 QQRFCEAFGWTGPV-FCISGLNGEGTQELIWALQDYL 335 >gi|92112609|ref|YP_572537.1| GTPase ObgE [Chromohalobacter salexigens DSM 3043] gi|122420761|sp|Q1R0C0|OBG_CHRSD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|91795699|gb|ABE57838.1| GTP1/OBG subdomain [Chromohalobacter salexigens DSM 3043] Length = 395 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 142/330 (43%), Positives = 219/330 (66%), Gaps = 8/330 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + + +G GG G +SFRREK++ GGPDGG GG GG V++ +LNTLIDF+ Sbjct: 1 MQFVDEASIIVEAGKGGNGCLSFRREKYVPKGGPDGGDGGHGGSVYLIGDESLNTLIDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ+ +KA +G+ G R SG GED+ + VPVGT V +ED + +I D+ + GQ +++A Sbjct: 61 YQRFYKAPNGQPGQGRQMSGRNGEDLHVKVPVGTTVIDEDTLEVIADVTEAGQVVLVAQA 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN HFKSSTN+AP PG G+ + + ++K++AD+G++G+PNAGKST + +V+ Sbjct: 121 GRRGLGNIHFKSSTNRAPRKTTPGTEGERRNLRFEMKVMADVGLLGVPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+A+YPFTTL PNLG+VK G E F++AD+PG+I+ A GAG+G RFLKH RT + Sbjct: 181 AAKPKVANYPFTTLVPNLGVVKLGTHEHFVMADVPGLIEGASDGAGLGLRFLKHLTRTRL 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V E + + + I EL +++ L ++ + L+++D + + +++ Sbjct: 241 LLHVVDVAPFDESDPVDSARAIAHELEQFSATLAERPRWLVLNKLDLLPEEERPSTVDDI 300 Query: 297 ATQ---CGQVPFEFSSITGHGIPQILECLH 323 + G V ++ S+I+G G +++ H Sbjct: 301 VERLAWSGPV-YKISAISGDGTQALVQAAH 329 >gi|294787667|ref|ZP_06752911.1| Obg family GTPase CgtA [Simonsiella muelleri ATCC 29453] gi|294483960|gb|EFG31643.1| Obg family GTPase CgtA [Simonsiella muelleri ATCC 29453] Length = 383 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 141/306 (46%), Positives = 209/306 (68%), Gaps = 5/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + G GG G SFRREKF+ GGPDGG GGRGG V+ A N+NTL+++R Sbjct: 1 MKFIDEAKIEVVGGKGGNGAASFRREKFVPRGGPDGGDGGRGGSVFAVADENVNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+ L +PVGT + + D ++ DL GQR+ +A G Sbjct: 61 FVKKYQAKNGEKGHGADRYGAGADDIELHMPVGTLIRDVDTDEIVADLTYHGQRVCVARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEDGEARTLQLELKVLADVGLLGMPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKVADYPFTTLHPNLGVVRTDENNSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E A + I+ EL Y+ L K + L+++D +D + ++ N+ Sbjct: 241 LLHVVDLAPFDETTDTAGEALAIIHELRKYDENLYDKPRWLVLNKLDMLDDEEAEQRAND 300 Query: 296 LATQCG 301 G Sbjct: 301 FLNAIG 306 >gi|56750592|ref|YP_171293.1| GTPase ObgE [Synechococcus elongatus PCC 6301] gi|81299768|ref|YP_399976.1| GTPase ObgE [Synechococcus elongatus PCC 7942] gi|81596538|sp|Q5N4J6|OBG_SYNP6 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|123557094|sp|Q31PN0|OBG_SYNE7 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|56685551|dbj|BAD78773.1| GTP-binding protein [Synechococcus elongatus PCC 6301] gi|81168649|gb|ABB56989.1| GTP-binding protein [Synechococcus elongatus PCC 7942] Length = 343 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 145/323 (44%), Positives = 214/323 (66%), Gaps = 1/323 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D A + +++GDGG G ++FRREK++ GGP GG+GGRGG V + AT L TL+DFR Sbjct: 1 MQFIDHATICVKAGDGGDGIVAFRREKYVPAGGPSGGNGGRGGSVILVATEQLQTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + FKAQ GE+G + +GA +D+++ VP GT V++ + + DL GQ + +A G Sbjct: 61 YLRLFKAQDGERGGPKGMTGASADDLIIQVPCGTAVYDAETDECLGDLTSAGQTLQVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S++N+AP +A PG+ G+E+ + L+LKL+A++G+IGLPNAGKS ++ ++ Sbjct: 121 GKGGLGNQHFLSNSNRAPEHALPGLPGEERQLRLELKLLAEVGLIGLPNAGKSMLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V +E + ADIPG+I+ AH+GAG+G FL+H ERT + Sbjct: 181 AAKPKIADYPFTTLVPNLGVVRRETGDGTVFADIPGLIEGAHRGAGLGHDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V E+ A ++ I EL AY L + +I+ L++ID V + L+ + E Sbjct: 241 LIHLVDLTAEDPIADWRTIQAELKAYGRGLSDRPQILALNKIDAVLDEDLSFWQAEFQAL 300 Query: 300 CGQVPFEFSSITGHGIPQILECL 322 SS G+ +L + Sbjct: 301 TPVPLLCISSADRRGLDALLRLV 323 >gi|289422617|ref|ZP_06424459.1| Obg family GTPase CgtA [Peptostreptococcus anaerobius 653-L] gi|289156968|gb|EFD05591.1| Obg family GTPase CgtA [Peptostreptococcus anaerobius 653-L] Length = 426 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 150/336 (44%), Positives = 221/336 (65%), Gaps = 8/336 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+A++++++G+GG G +SFRREK++ GGPDGG GG+G + I+A + L TL+DF+Y+ Sbjct: 2 FIDKARIFVKAGNGGNGSVSFRREKYVPAGGPDGGDGGKGASIIIEADNGLRTLMDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + AQHGE G KR+RSG GED+VL VP GT V +E +I DL + G ++A GG Sbjct: 62 KKYTAQHGEDGAKRHRSGKNGEDLVLKVPEGTIVKDEATGLVIADLKKHGDTAVVAKGGF 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +F ++ QAP +A G G+E+ I L+LK+IAD+G++G PN GKSTFL+ VT A Sbjct: 122 GGRGNQNFANAVRQAPAFAKSGTDGEERWIILELKMIADVGLVGFPNVGKSTFLSVVTSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+VK + E F++ADIPGII+ A G G+G FL+H ERT VL+ Sbjct: 182 KPKIANYHFTTLTPNLGVVKTRFGESFVMADIPGIIEGAADGVGLGHDFLRHVERTKVLI 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 HIV S +E + + I +EL YN +L + +++ ++ D + D++ + Sbjct: 242 HIVDISGIEGRDPIDDFNKINEELKLYNEKLSTRPQVILANKSDLLYDDSVYENFKKTME 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + G F+ S T G+ ++ DK+ + E E Sbjct: 302 EKGYPVFKTSVATRDGVDSVI----DKVTQLLSEVE 333 >gi|194335411|ref|YP_002017205.1| GTP-binding protein Obg/CgtA [Pelodictyon phaeoclathratiforme BU-1] gi|261277659|sp|B4SBR3|OBG_PELPB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|194307888|gb|ACF42588.1| GTP-binding protein Obg/CgtA [Pelodictyon phaeoclathratiforme BU-1] Length = 337 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 146/328 (44%), Positives = 213/328 (64%), Gaps = 8/328 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D A +++ +GDGG G +SFRREKF+ GGPDGG GGRGG VW++ L TL+DF+ Sbjct: 1 MKFVDSASIFVHAGDGGKGCVSFRREKFVPKGGPDGGDGGRGGHVWLRTNRQLTTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ + A G G ++G G DVV+ VP GT V + +I DL E Q I++A G Sbjct: 61 YKKKYIAVRGVHGQGARKTGRDGADVVIDVPCGTIVRNGETNEIIADLTGEDQEILIARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF + T QAP YA PG G+ ++ ++LKL+AD+G++G PNAGKST ++ ++ Sbjct: 121 GKGGRGNQHFATPTRQAPRYAEPGQKGELLMLNMELKLMADVGLVGFPNAGKSTLISVIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLGIV+ E YK F++ADIPGII+ A +G G+G +FL+H ERT + Sbjct: 181 AAKPKIADYPFTTLVPNLGIVRYEEYKSFVMADIPGIIEGAAEGKGLGLQFLRHIERTKI 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT- 298 L +++A ++ Y +L EL + EL K +V ++++D D E+ T Sbjct: 241 LAILIAADSPDIADEYHTLLGELEKFEKELLDKPRLVVVTKMDIAAEDL------EIPTL 294 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKI 326 + G S+++G G+ ++ + L ++ Sbjct: 295 EEGVRVLSISAVSGQGLKELKDELWREV 322 >gi|261342628|ref|ZP_05970486.1| Obg family GTPase CgtA [Enterobacter cancerogenus ATCC 35316] gi|288315276|gb|EFC54214.1| Obg family GTPase CgtA [Enterobacter cancerogenus ATCC 35316] Length = 391 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 142/289 (49%), Positives = 205/289 (70%), Gaps = 4/289 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPRGGPDGGDGGDGGDVWLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DVV+ VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDVVIKVPVGTRVIDQGTGETMGDMTKHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN+ FKSS N+AP G G + + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNSRFKSSVNRAPRQKTMGTPGDTRDLQLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDHEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLHI+ E + + I+ EL Y+ +L K + ++ID +D Sbjct: 241 LLHIIDINPIDESDPVDNARIIIGELEKYSEKLAGKPRWLVFNKIDLMD 289 >gi|238023045|ref|ZP_04603471.1| hypothetical protein GCWU000324_02968 [Kingella oralis ATCC 51147] gi|237865428|gb|EEP66568.1| hypothetical protein GCWU000324_02968 [Kingella oralis ATCC 51147] Length = 382 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 146/322 (45%), Positives = 214/322 (66%), Gaps = 11/322 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + G GG G SFRREKF+ GGPDGG GGRGG V+ A N+NTL+++R Sbjct: 1 MKFIDEAKIEVFGGRGGNGAASFRREKFVPRGGPDGGDGGRGGSVFAVADENVNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+ L +PVGT + + D ++ DL GQR+ +A G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIELHMPVGTLIRDADTDEIVADLTHHGQRVCVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP G G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQFTTGEEGEARTLLLELKVLADVGLLGMPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKVADYPFTTLHPNLGVVRIDENNSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + +E A + I++EL Y+ EL K + L+++D +D +T ++ Sbjct: 241 LLHVIDLAPFDETTDTAAEALAIVNELRKYDEELYDKPRWLVLNKLDMLDEETAQQRIAH 300 Query: 296 LATQCG---QVP---FEFSSIT 311 L G P FEF T Sbjct: 301 LLAAIGWDYPTPDDRFEFDMTT 322 >gi|171316232|ref|ZP_02905455.1| GTP-binding protein Obg/CgtA [Burkholderia ambifaria MEX-5] gi|171098646|gb|EDT43443.1| GTP-binding protein Obg/CgtA [Burkholderia ambifaria MEX-5] Length = 370 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 164/333 (49%), Positives = 229/333 (68%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG+V+ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGNVYAIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+DV L +PVGT V + D LI DL + GQ+++LA G Sbjct: 61 YAKKHLARNGENGRGSDCYGKGGDDVTLRMPVGTVVTDMDTGELIADLTEHGQQVMLANG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMLRLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT V Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPSKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGV 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL-ARKKN 294 LLH+V + +ENV A + I+ EL Y+ L +K + L+++D V D AR + Sbjct: 241 LLHLVDLAPFDENVDPVAEAKAIVGELRKYDEALYEKPRWLVLNKLDMVPEDEREARVAD 300 Query: 295 ELATQCGQVP-FEFSSITGHGIPQILECLHDKI 326 LA P FE S++TG G + ++D + Sbjct: 301 FLARFDWDGPVFEISALTGQGCEALCYAIYDYL 333 >gi|291166521|gb|EFE28567.1| Obg family GTPase CgtA [Filifactor alocis ATCC 35896] Length = 427 Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 151/336 (44%), Positives = 223/336 (66%), Gaps = 8/336 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+A+++I++G+GG G ++FRRE ++ GGP GG GG GG++ +A +NL TL+DF+Y+ Sbjct: 2 FIDKAEIFIKAGNGGNGAVAFRREIYVPAGGPAGGDGGNGGNIIFRADANLRTLMDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + ++A GE G N G GE++VL VP+GT + +++ ++ DL + G+ I+A GG Sbjct: 62 KSYQAPSGEDGKGSNMHGKSGENLVLKVPIGTIIRDKESGLVLADLKENGEEAIVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+ST QAP +A G GQE+ + L+LKLIAD+G+IG PN GKSTFL+ VT+A Sbjct: 122 GGRGNTHFKTSTRQAPNFAKAGTEGQERTVTLELKLIADVGLIGFPNVGKSTFLSIVTKA 181 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 PKIA+Y FTTL PNLG+V K G F++ADIPGII+ AH G G+G FL+H ERT +L Sbjct: 182 NPKIANYHFTTLTPNLGVVNLKNG-TGFVIADIPGIIEGAHSGVGLGHDFLRHIERTRIL 240 Query: 241 LHIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNEL 296 LH+V S +E + + I +EL YN +L K+ +IV +++D + + D KN++ Sbjct: 241 LHVVDISGIEGRDPHDDFLKINEELHLYNEKLSKREQIVIANKMDLLFEKDRYHEFKNKI 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + G F S T G+ IL+ + ++ I E Sbjct: 301 E-KYGYKVFPLSGATKEGLDDILDYVSQRLLEIETE 335 >gi|270159186|ref|ZP_06187842.1| GTP-binding protein Obg/CgtA [Legionella longbeachae D-4968] gi|289165986|ref|YP_003456124.1| essential GTPase [Legionella longbeachae NSW150] gi|269987525|gb|EEZ93780.1| GTP-binding protein Obg/CgtA [Legionella longbeachae D-4968] gi|288859159|emb|CBJ13088.1| putative essential GTPase [Legionella longbeachae NSW150] Length = 341 Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 153/334 (45%), Positives = 226/334 (67%), Gaps = 9/334 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + I +G GG G +SFRREKFI GGPDGG GG GG V+ +A+++LNTLIDFR Sbjct: 1 MKFVDEAVIKIEAGHGGNGCLSFRREKFIPRGGPDGGDGGDGGSVYFEASTDLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +H+KA +G++GM N +G KG+D+++ VPVGT +++ D L+ D+ + +++A G Sbjct: 61 YMRHYKAGNGQQGMGGNCTGKKGDDLIIKVPVGTLIYDMDTDELLGDIKEPNVPVLIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N++P G LG+ + + L+L+++AD+G++GLPNAGKST + +V+ Sbjct: 121 GFHGLGNTRFKSSVNRSPRQTTQGSLGESRNLRLELRVLADVGLLGLPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +K K+ADYPFTTL+P+LG+V +K F++ADIPG+I+ A GAG+G RFLKH RT V Sbjct: 181 SSKAKVADYPFTTLHPSLGVVSVSSHKSFVMADIPGLIEGASTGAGLGHRFLKHLSRTCV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ + A+ Q I++EL+ YN EL KK + L+++DT+ DT +R++ Sbjct: 241 LLHVIDVAPIDGSDPVASAQTIINELAQYNPELLKKNRWLVLNKMDTL-PDTKSREEKIQ 299 Query: 297 ATQCG----QVPFEFSSITGHGIPQILECLHDKI 326 + G F S+I+G G Q+ L I Sbjct: 300 SIVTGLNWKDKVFAISAISGEGTQQLCYSLMQLI 333 >gi|327439527|dbj|BAK15892.1| predicted GTPase [Solibacillus silvestris StLB046] Length = 429 Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 132/321 (41%), Positives = 207/321 (64%), Gaps = 5/321 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y++ GDGG G ++FRREK++ GGP GG G RGG+V + L TL+DFRY+ Sbjct: 2 FVDHVKIYVKGGDGGDGMVAFRREKYVPNGGPAGGDGARGGNVIFEVEEGLRTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE GM + G + ED+++ VP GT V + ++I DL + GQ+ ++A G Sbjct: 62 RHFKAERGEHGMSKGMHGRRAEDLIVKVPPGTVVMNAETKTVIADLVEHGQQAVIAKAGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + +N AP A G GQE + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNCRFATPSNPAPELAEKGEPGQELEVILELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ AHQG G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIVPNLGMVETDDGRSFAMADLPGLIEGAHQGVGLGMQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ S +E Y I +EL YN L ++ +IV +++D +++ ++ + Sbjct: 242 HVIDMSGMEGREPYDDYVTINNELEQYNLRLLERPQIVVANKMDMPNAEENLKEFKKKVG 301 Query: 299 QCGQVPFEFSSITGHGIPQIL 319 + +V F S+++ G+ +L Sbjct: 302 EDVKV-FPVSAVSRQGLKPLL 321 >gi|329905266|ref|ZP_08274080.1| GTP-binding protein Obg [Oxalobacteraceae bacterium IMCC9480] gi|327547658|gb|EGF32449.1| GTP-binding protein Obg [Oxalobacteraceae bacterium IMCC9480] Length = 368 Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 146/338 (43%), Positives = 225/338 (66%), Gaps = 8/338 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +GDGG G SF REKF FGGPDGG GG+GG +W A N+NTL+D+R Sbjct: 1 MKFIDEAKIEVIAGDGGNGVASFCREKFRPFGGPDGGDGGKGGTIWAVADRNINTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + KA++GE G + G +D++L +PVGT + + +I D+ + GQ+ +LA G Sbjct: 61 FSKMHKARNGENGRGADCYGKGADDILLRMPVGTLIIDHINGEVIADMTEHGQQAMLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HFK+STN+AP G G+ + + L+LK++AD+G++G+PNAGKSTF+++V+ Sbjct: 121 GEGGWGNIHFKTSTNRAPRQKGDGKEGERRELRLELKVLADVGLLGMPNAGKSTFISAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ + K F++ADIPG+I+ A +GAG+G +FL+H +RT V Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVSHEKSFVIADIPGLIEGAAEGAGLGIQFLRHLQRTRV 240 Query: 240 LLHIVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV + V+ A + I+ EL Y+ L K + L+++D V + ++ + Sbjct: 241 LLHIVDLAPFDTVDPVKEA-KAIVKELKKYDESLFDKPRWLVLNKLDVVPEEERTKRVKD 299 Query: 296 LATQCGQ--VPFEFSSITGHGIPQILECLHDKIFSIRG 331 + G FE S++ G P+++ +++ + R Sbjct: 300 FVKRFGWKGPTFEISALNHDGCPELVIAIYNYLAEQRA 337 >gi|157148755|ref|YP_001456073.1| GTPase ObgE [Citrobacter koseri ATCC BAA-895] gi|261266730|sp|A8AQ74|OBG_CITK8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|157085960|gb|ABV15638.1| hypothetical protein CKO_04587 [Citrobacter koseri ATCC BAA-895] Length = 390 Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 143/306 (46%), Positives = 209/306 (68%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTMGTPGDKRDLMLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D K Sbjct: 241 LLHLIDIDPIDGSDPVENA-RIIIGELEKYSQDLAAKPRWLVFNKIDLLDQAEAEEKAKA 299 Query: 296 LATQCG 301 +A G Sbjct: 300 IAQALG 305 >gi|308801815|ref|XP_003078221.1| putative GTP-binding protein (ISS) [Ostreococcus tauri] gi|116056672|emb|CAL52961.1| putative GTP-binding protein (ISS) [Ostreococcus tauri] Length = 601 Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 140/319 (43%), Positives = 209/319 (65%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+ D AK+++++GDGG G ++FRREKF+ GGP GG+GG GG ++ N+N+L FR Sbjct: 145 MRCFDTAKIFVKAGDGGDGQVAFRREKFVPQGGPSGGNGGLGGGIYFVGDKNINSLDIFR 204 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + H +A+ G++G+ +G G D+ + VP GT + + +I ++ + GQR++ G Sbjct: 205 KKVHHRAEGGKRGLGDKMAGRNGRDLEILVPPGTIIRDSRTQKIIGEITKGGQRVLALVG 264 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FK++ N+AP A G G+E L+LKL+AD+GIIG+PNAGKST LASV+ Sbjct: 265 GRGGRGNASFKTAKNKAPMIAELGEKGKEFWAELELKLVADVGIIGVPNAGKSTLLASVS 324 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTT+ PNLG+V Y+ + ADIPGI++ A +G G+G FL+HT+RT VL Sbjct: 325 AAKPKIADYPFTTIVPNLGVVDRDYERMVFADIPGILEGASEGVGLGFEFLRHTKRTRVL 384 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ E AY+ I EL +++ L K EIV L+++D V++ A + E+ Sbjct: 385 VHVIDCTSETCLEAYEAIRTELELFDAVLLDKPEIVALNKVDDVEATERALQMKEMFDAQ 444 Query: 301 GQVPFEFSSITGHGIPQIL 319 G S++TG G+ ++L Sbjct: 445 GVTSHCISAVTGEGVEELL 463 >gi|237721475|ref|ZP_04551956.1| GTPase ObgE [Bacteroides sp. 2_2_4] gi|260171498|ref|ZP_05757910.1| GTPase ObgE [Bacteroides sp. D2] gi|299148776|ref|ZP_07041838.1| Obg family GTPase CgtA [Bacteroides sp. 3_1_23] gi|315919812|ref|ZP_07916052.1| GTPase ObgE [Bacteroides sp. D2] gi|229449271|gb|EEO55062.1| GTPase ObgE [Bacteroides sp. 2_2_4] gi|298513537|gb|EFI37424.1| Obg family GTPase CgtA [Bacteroides sp. 3_1_23] gi|313693687|gb|EFS30522.1| GTPase ObgE [Bacteroides sp. D2] Length = 388 Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 147/326 (45%), Positives = 210/326 (64%), Gaps = 5/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+ GGPDGG GGRGG + ++ N TL+ +Y Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYCPNGGPDGGDGGRGGHIILRGNRNYWTLLHLKYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G G D V+ VP GT V+ + +CD+ ++GQ +IL GG Sbjct: 66 RHAMAGHGESGSKGRSFGKDGADKVIEVPCGTVVYNAETGEYLCDVTEDGQEVILLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + ++LKL+AD+G++G PNAGKST L+S++ A Sbjct: 126 GGQGNWHFKTATRQAPRFAQPGEPMQEMTVIMELKLLADVGLVGFPNAGKSTLLSSISAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADYPFTTL PNLGIV G K F++ADIPGII+ A QG G+G RFL+H ER +LL Sbjct: 186 KPKIADYPFTTLEPNLGIVSYHGGKSFVMADIPGIIEGASQGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 246 FMVPADSDDIRKEYEVLLNELRTFNPEMLDKQRVLAVTKSDMLDQELMDEIEPTLPE--- 302 Query: 302 QVPFEF-SSITGHGIPQILECLHDKI 326 +P F SS++G GI + + L +++ Sbjct: 303 GIPHVFISSVSGLGISVLKDILWEEL 328 >gi|254524066|ref|ZP_05136121.1| GTP-binding protein Obg/CgtA [Stenotrophomonas sp. SKA14] gi|219721657|gb|EED40182.1| GTP-binding protein Obg/CgtA [Stenotrophomonas sp. SKA14] Length = 371 Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 153/309 (49%), Positives = 208/309 (67%), Gaps = 8/309 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MK +DEA++ + +G+GG G I FRREKFI GGPDGG GG GG V+I+A NLNTL+DFR Sbjct: 22 MKLVDEAEIEVFAGNGGNGCIGFRREKFIPLGGPDGGDGGAGGSVYIRADENLNTLVDFR 81 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + FKAQ GE GM R G GED+ +TVPVGT V +I DL Q R+++A G Sbjct: 82 HDRIFKAQRGENGMGRQAYGKGGEDLTITVPVGTVVINVATDEVIGDLTQHNDRLLVAKG 141 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN++P A PG G+E+ + L+LKL+AD+G++G PNAGKST + +V+ Sbjct: 142 GRGGLGNMHFKSSTNRSPRQALPGEPGEERTLKLELKLLADVGLLGFPNAGKSTLIRAVS 201 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTLYPNLG+VK E Y+ F++ADIPG+I+ A GAG+G +FL+H +RT + Sbjct: 202 AATPKVADYPFTTLYPNLGVVKVENYRSFVIADIPGLIEGAADGAGLGAQFLRHLQRTRL 261 Query: 240 LLHIV--SALEENVQA-----AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 LLH+V S +E V+ + I EL ++ EL K + L++ D + D Sbjct: 262 LLHLVDISPMEGGVEGISPVEQVRAIERELEKHDPELLNKPRWLVLNKADLMFEDEAKAA 321 Query: 293 KNELATQCG 301 ++ + G Sbjct: 322 AEQIVAELG 330 >gi|293369216|ref|ZP_06615810.1| Obg family GTPase CgtA [Bacteroides ovatus SD CMC 3f] gi|292635799|gb|EFF54297.1| Obg family GTPase CgtA [Bacteroides ovatus SD CMC 3f] Length = 386 Score = 258 bits (660), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 146/326 (44%), Positives = 210/326 (64%), Gaps = 5/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+ GGPDGG GGRGG + ++ N TL+ +Y Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYCPNGGPDGGDGGRGGHIILRGNRNYWTLLHLKYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G G D ++ VP GT V+ + +CD+ ++GQ +IL GG Sbjct: 66 RHAMAGHGESGSKGRSFGKDGADKIIEVPCGTVVYNAETGEYLCDVTEDGQEVILLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + ++LKL+AD+G++G PNAGKST L+S++ A Sbjct: 126 GGQGNWHFKTATRQAPRFAQPGEPMQEMTVIMELKLLADVGLVGFPNAGKSTLLSSISAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADYPFTTL PNLGIV G K F++ADIPGII+ A QG G+G RFL+H ER +LL Sbjct: 186 KPKIADYPFTTLEPNLGIVSYHGGKSFVMADIPGIIEGASQGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 246 FMVPADSDDIRKEYEVLLNELRTFNPEMLDKQRVLAVTKSDMLDQELMDEIEPTLPE--- 302 Query: 302 QVPFEF-SSITGHGIPQILECLHDKI 326 +P F SS++G GI + + L +++ Sbjct: 303 GIPHVFISSVSGLGISVLKDILWEEL 328 >gi|237715694|ref|ZP_04546175.1| GTPase ObgE [Bacteroides sp. D1] gi|262408703|ref|ZP_06085249.1| obg family GTPase CgtA [Bacteroides sp. 2_1_22] gi|294646081|ref|ZP_06723745.1| Obg family GTPase CgtA [Bacteroides ovatus SD CC 2a] gi|294807276|ref|ZP_06766090.1| Obg family GTPase CgtA [Bacteroides xylanisolvens SD CC 1b] gi|229444403|gb|EEO50194.1| GTPase ObgE [Bacteroides sp. D1] gi|262353568|gb|EEZ02662.1| obg family GTPase CgtA [Bacteroides sp. 2_1_22] gi|292638573|gb|EFF56927.1| Obg family GTPase CgtA [Bacteroides ovatus SD CC 2a] gi|294445574|gb|EFG14227.1| Obg family GTPase CgtA [Bacteroides xylanisolvens SD CC 1b] Length = 387 Score = 258 bits (660), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 146/326 (44%), Positives = 210/326 (64%), Gaps = 5/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+ GGPDGG GGRGG + ++ N TL+ +Y Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYCPNGGPDGGDGGRGGHIILRGNRNYWTLLHLKYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G G D ++ VP GT V+ + +CD+ ++GQ +IL GG Sbjct: 66 RHAMAGHGESGSKGRSFGKDGADKIIEVPCGTVVYNAETGEYLCDVTEDGQEVILLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + ++LKL+AD+G++G PNAGKST L+S++ A Sbjct: 126 GGQGNWHFKTATRQAPRFAQPGEPMQEMTVIMELKLLADVGLVGFPNAGKSTLLSSISAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADYPFTTL PNLGIV G K F++ADIPGII+ A QG G+G RFL+H ER +LL Sbjct: 186 KPKIADYPFTTLEPNLGIVSYHGGKSFVMADIPGIIEGASQGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 246 FMVPADSDDIRKEYEVLLNELRTFNPEMLDKQRVLAVTKSDMLDQELMDEIEPTLPE--- 302 Query: 302 QVPFEF-SSITGHGIPQILECLHDKI 326 +P F SS++G GI + + L +++ Sbjct: 303 GIPHVFISSVSGLGISVLKDILWEEL 328 >gi|255655165|ref|ZP_05400574.1| Spo0B-associated GTP-binding protein [Clostridium difficile QCD-23m63] Length = 425 Score = 258 bits (660), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 148/322 (45%), Positives = 220/322 (68%), Gaps = 6/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+A++++++G+GG G ++FRREK++ GGPDGG GGRG + + L TL+DF+YQ Sbjct: 2 FIDKARIFVKAGNGGNGSVAFRREKYVPAGGPDGGDGGRGASIIFEVDLGLRTLMDFKYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + ++AQ+G G K R+G GE++VL VP GT + +E ++ DL +EG I+A GG Sbjct: 62 KKYQAQNGGDGSKGKRAGKNGENLVLKVPAGTVIRDEATGLVLADLKKEGDTAIVAKGGI 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF ++ QAP +A G G+E+ I L+LK+IAD+G++G PN GKSTFL+ VT+A Sbjct: 122 GGKGNQHFANAVRQAPAFAKSGTDGEERWITLELKMIADVGLLGFPNVGKSTFLSVVTKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V+ + + F+LADIPGII+ A +G G+G FL+H ERT VL+ Sbjct: 182 KPKIANYHFTTLTPNLGVVQTKFGDSFVLADIPGIIEGASEGIGLGHEFLRHVERTKVLI 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK-KNELA 297 HIV S LE + + I DEL YN +L K+ ++V ++ D ++ ++ K K+EL Sbjct: 242 HIVDISGLEGRDPIEDFDKINDELKLYNEKLSKRPQVVVANKFDILEDESKFEKFKSELE 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 ++ G F+ S+ T G+ I+ Sbjct: 302 SR-GYTVFKMSAATRQGVDDII 322 >gi|160887207|ref|ZP_02068210.1| hypothetical protein BACOVA_05223 [Bacteroides ovatus ATCC 8483] gi|156107618|gb|EDO09363.1| hypothetical protein BACOVA_05223 [Bacteroides ovatus ATCC 8483] Length = 388 Score = 258 bits (660), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 146/326 (44%), Positives = 210/326 (64%), Gaps = 5/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+ GGPDGG GGRGG + ++ N TL+ +Y Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYCPNGGPDGGDGGRGGHIILRGNRNYWTLLHLKYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G G D ++ VP GT V+ + +CD+ ++GQ +IL GG Sbjct: 66 RHAMAGHGESGSKGRSFGKDGADKIIEVPCGTVVYNAETGEYLCDVTEDGQEVILLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + ++LKL+AD+G++G PNAGKST L+S++ A Sbjct: 126 GGQGNWHFKTATRQAPRFAQPGEPMQEMTVIMELKLLADVGLVGFPNAGKSTLLSSISAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADYPFTTL PNLGIV G K F++ADIPGII+ A QG G+G RFL+H ER +LL Sbjct: 186 KPKIADYPFTTLEPNLGIVSYHGGKSFVMADIPGIIEGASQGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 246 FMVPADSDDIRKEYEVLLNELRTFNPEMLDKQRVLAVTKSDMLDQELMDEIEPTLPE--- 302 Query: 302 QVPFEF-SSITGHGIPQILECLHDKI 326 +P F SS++G GI + + L +++ Sbjct: 303 GIPHVFISSVSGLGISVLKDILWEEL 328 >gi|170699964|ref|ZP_02890991.1| GTP-binding protein Obg/CgtA [Burkholderia ambifaria IOP40-10] gi|170135112|gb|EDT03413.1| GTP-binding protein Obg/CgtA [Burkholderia ambifaria IOP40-10] Length = 370 Score = 258 bits (660), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 164/333 (49%), Positives = 228/333 (68%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG+V+ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGNVYAIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+DV L +PVGT V + D LI DL + GQ+++LA G Sbjct: 61 YAKKHLARNGENGRGSDCYGKGGDDVTLRMPVGTVVTDMDTGELIADLTEHGQQVMLANG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMLRLVLKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT V Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPSKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGV 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL-ARKKN 294 LLH+V + +ENV A + I+ EL Y+ L +K + L+++D V D AR + Sbjct: 241 LLHLVDLAPFDENVDPVAEAKAIVGELRKYDEALYEKPRWLVLNKLDMVPEDEREARVAD 300 Query: 295 ELATQCGQVP-FEFSSITGHGIPQILECLHDKI 326 LA P FE S++TG G + ++D + Sbjct: 301 FLARFDWDGPVFEISALTGQGCEALCYAIYDYL 333 >gi|152981094|ref|YP_001354682.1| GTPase ObgE [Janthinobacterium sp. Marseille] gi|261266836|sp|A6T2D5|OBG_JANMA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|151281171|gb|ABR89581.1| GTP-binding protein [Janthinobacterium sp. Marseille] Length = 369 Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 150/332 (45%), Positives = 225/332 (67%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +GDGG G SF REKF FGGPDGG GG+GG ++ A N+NTL+DFR Sbjct: 1 MKFIDEAKIEVIAGDGGNGVASFCREKFRPFGGPDGGDGGKGGSIYAVADRNINTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + KA++GE G + G +D+ L +PVGT + + + LI DL + GQ +++A G Sbjct: 61 FAKMHKAKNGENGRGADCYGKGADDIKLRMPVGTLIIDNNDGELIADLTEHGQEVLIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HFKSSTN+AP + G G+ + + L+LK++ADIG++G+PNAGKSTF+++V+ Sbjct: 121 GEGGWGNIHFKSSTNRAPRQKSEGKEGERRELRLELKVLADIGLLGMPNAGKSTFISAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ + K F++ADIPG+I+ A GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVSHEKSFVIADIPGLIEGASDGAGLGIQFLRHLQRTRL 240 Query: 240 LLHIVS-ALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHIV A +NV + I+ EL Y+ L K + L+++D V + ++ + Sbjct: 241 LLHIVDLAPFDNVDPVKEAKAIVKELKKYDEALFDKPRWLVLNKLDMVPEEERKKRVKDF 300 Query: 297 ATQCG-QVP-FEFSSITGHGIPQILECLHDKI 326 + G + P FE S++T G ++ +++ I Sbjct: 301 IKRFGWKGPVFEISALTREGCSDLVTEIYEYI 332 >gi|296451153|ref|ZP_06892894.1| obg family GTPase CgtA [Clostridium difficile NAP08] gi|296880495|ref|ZP_06904457.1| obg family GTPase CgtA [Clostridium difficile NAP07] gi|296259974|gb|EFH06828.1| obg family GTPase CgtA [Clostridium difficile NAP08] gi|296428449|gb|EFH14334.1| obg family GTPase CgtA [Clostridium difficile NAP07] Length = 428 Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 148/322 (45%), Positives = 220/322 (68%), Gaps = 6/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+A++++++G+GG G ++FRREK++ GGPDGG GGRG + + L TL+DF+YQ Sbjct: 5 FIDKARIFVKAGNGGNGSVAFRREKYVPAGGPDGGDGGRGASIIFEVDLGLRTLMDFKYQ 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + ++AQ+G G K R+G GE++VL VP GT + +E ++ DL +EG I+A GG Sbjct: 65 KKYQAQNGGDGSKGKRAGKNGENLVLKVPAGTVIRDEATGLVLADLKKEGDTAIVAKGGI 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF ++ QAP +A G G+E+ I L+LK+IAD+G++G PN GKSTFL+ VT+A Sbjct: 125 GGKGNQHFANAVRQAPAFAKSGTDGEERWITLELKMIADVGLLGFPNVGKSTFLSVVTKA 184 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V+ + + F+LADIPGII+ A +G G+G FL+H ERT VL+ Sbjct: 185 KPKIANYHFTTLTPNLGVVQTKFGDSFVLADIPGIIEGASEGIGLGHEFLRHVERTKVLI 244 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK-KNELA 297 HIV S LE + + I DEL YN +L K+ ++V ++ D ++ ++ K K+EL Sbjct: 245 HIVDISGLEGRDPIEDFDKINDELKLYNEKLSKRPQVVVANKFDILEDESKFEKFKSELE 304 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 ++ G F+ S+ T G+ I+ Sbjct: 305 SR-GYTVFKMSAATRQGVDDII 325 >gi|149370844|ref|ZP_01890439.1| putative Spo0B-related GTP-binding protein [unidentified eubacterium SCB49] gi|149355630|gb|EDM44188.1| putative Spo0B-related GTP-binding protein [unidentified eubacterium SCB49] Length = 338 Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 146/322 (45%), Positives = 210/322 (65%), Gaps = 2/322 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D K++++SG GG G RREK+I GGPDGG GGRGG V + A SN+ TL +++ Sbjct: 6 FTDYVKIHVQSGKGGQGSAHLRREKYIPKGGPDGGDGGRGGHVILVANSNMWTLHHLKFK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H +A HG G K +GA G DV + VP+GT V + + +L + G+ +I+A GG Sbjct: 66 RHLRAGHGGAGSKSTSTGADGADVYVDVPLGTTVINTETGERLKELLEHGEELIIAQGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSSTNQ P YA PG+ G+E L++K++AD+G++G PNAGKST L+ +T A Sbjct: 126 GGRGNNHFKSSTNQTPRYAQPGMDGEEGHFTLEMKVLADVGLVGFPNAGKSTLLSVITAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLGIV+ ++ F++ADIPGII+ A +G G+G FL+H ER LL Sbjct: 186 KPKIANYEFTTLKPNLGIVEYRDHRTFVMADIPGIIEGAAEGKGLGHYFLRHIERNSTLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A ++++ Y +LDEL YN EL K ++V +S+ D +D + A K +L Sbjct: 246 FLIPADADDIKEQYNILLDELKRYNPELIDKDKLVAISKSDMLDEELKAELKEQLDKDFK 305 Query: 302 QVPFE-FSSITGHGIPQILECL 322 +P+ FSS+ G+ ++ + L Sbjct: 306 GIPYLFFSSVAQQGLMELKDTL 327 >gi|163754197|ref|ZP_02161320.1| putative Spo0B-related GTP-binding protein [Kordia algicida OT-1] gi|161326411|gb|EDP97737.1| putative Spo0B-related GTP-binding protein [Kordia algicida OT-1] Length = 332 Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 149/329 (45%), Positives = 212/329 (64%), Gaps = 7/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+++ SG+GG G + REK+ GGPDGG GGRGG + ++ NL TL F+ + Sbjct: 6 FVDYVKMHLTSGNGGKGSMHLLREKYNAKGGPDGGDGGRGGHIIVRGNQNLWTLFHFKLK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KA+HG G +GA G DV L VP+GT V +++ ++I ++ + G+ I+A GG Sbjct: 66 RHYKAEHGGHGSSNRSTGADGADVYLDVPLGTVVRDKETNNVIFEITEHGEEKIVAKGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSSTNQ P YA PGI G+E + L+LK++AD+G++G PNAGKST L+ +T A Sbjct: 126 GGRGNWHFKSSTNQTPRYAQPGIPGEEVDVILELKVLADVGLVGFPNAGKSTLLSVITSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI DY FTTL PNLGIV+ YK F++ADIPGII+ A +G G+G FL+H ER LL Sbjct: 186 KPKIGDYEFTTLKPNLGIVEYRDYKSFVMADIPGIIEGASEGKGLGHYFLRHIERNSTLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A ++ Y +L+EL YN E+ K + +S+ D +D + A + EL Sbjct: 246 FLIPADSADISKEYDILLNELKKYNPEMLDKERFIAISKSDMLDDELKAEMRVELDKDL- 304 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFSI 329 VP+ F SS+ GI + L DK++ + Sbjct: 305 NVPYMFISSVAQEGIME----LKDKLWEM 329 >gi|71898766|ref|ZP_00680935.1| GTP1/OBG subdomain [Xylella fastidiosa Ann-1] gi|71731531|gb|EAO33593.1| GTP1/OBG subdomain [Xylella fastidiosa Ann-1] Length = 357 Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 133/245 (54%), Positives = 181/245 (73%), Gaps = 1/245 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +G+GG G +SFRREKFI GGPDGG GG GG VW+ A NLNTL+DFR Sbjct: 1 MKFVDEAEIQVIAGNGGDGCVSFRREKFIPLGGPDGGDGGDGGSVWLVADENLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ FKAQ G GM + G G+D +++VP+GT V +I D+ + G R+++A G Sbjct: 61 HERIFKAQRGVNGMGQQMYGKAGQDKIISVPIGTVVINVQTDEVIGDMVRHGDRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP A G G+E+ + L+LKL+ADIG++G PN GKSTF+ +V+ Sbjct: 121 GTGGLGNMHFKSSINRAPRQARSGEQGEERTLKLELKLLADIGMLGFPNVGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTLYPNLG+VK E Y F++AD+PG+I+ A G G+G +FL+H +RT + Sbjct: 181 AATPKVADYPFTTLYPNLGVVKIEAYSSFVIADVPGLIEGAADGVGLGMQFLRHLQRTKL 240 Query: 240 LLHIV 244 LLH+V Sbjct: 241 LLHMV 245 >gi|253569840|ref|ZP_04847249.1| GTPase ObgE [Bacteroides sp. 1_1_6] gi|251840221|gb|EES68303.1| GTPase ObgE [Bacteroides sp. 1_1_6] Length = 388 Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 147/327 (44%), Positives = 212/327 (64%), Gaps = 7/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+ GGPDGG GGRGG + ++ N TL+ +Y Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYCPNGGPDGGDGGRGGHIILRGNRNYWTLLHLKYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G G D V+ VP GT V+ + +CD+ +GQ +IL GG Sbjct: 66 RHAMAGHGESGSKNRSFGKDGADKVIEVPCGTVVYNAETGEYLCDVTDDGQEVILLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+HFK++T QAP +A PG QE + ++LKL+AD+G++G PNAGKST L++++ A Sbjct: 126 GGQGNSHFKTATRQAPRFAQPGEPMQEMTVIMELKLLADVGLVGFPNAGKSTLLSAISAA 185 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIADYPFTTL PNLGIV ++G K F++ADIPGII+ A QG G+G RFL+H ER +L Sbjct: 186 KPKIADYPFTTLEPNLGIVSYRDG-KSFVMADIPGIIEGASQGKGLGLRFLRHIERNSLL 244 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L +V A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 245 LFMVPADSDDIRKEYEVLLNELRTFNPEMLDKQRVLAITKSDMLDQELMDEIEPTLPE-- 302 Query: 301 GQVPFEF-SSITGHGIPQILECLHDKI 326 VP F SS++G GI + + L +++ Sbjct: 303 -GVPHIFISSVSGLGISVLKDILWEEL 328 >gi|29349796|ref|NP_813299.1| GTPase ObgE [Bacteroides thetaiotaomicron VPI-5482] gi|81586601|sp|Q89ZI9|OBG_BACTN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|29341707|gb|AAO79493.1| GTP-binding protein [Bacteroides thetaiotaomicron VPI-5482] Length = 388 Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 147/327 (44%), Positives = 212/327 (64%), Gaps = 7/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+ GGPDGG GGRGG + ++ N TL+ +Y Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYCPNGGPDGGDGGRGGHIILRGNRNYWTLLHLKYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G G D V+ VP GT V+ + +CD+ +GQ +IL GG Sbjct: 66 RHAMAGHGESGSKNRSFGKDGADKVIEVPCGTVVYNAETGEYLCDVTDDGQEVILLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+HFK++T QAP +A PG QE + ++LKL+AD+G++G PNAGKST L++++ A Sbjct: 126 GGQGNSHFKTATRQAPRFAQPGEPMQEMTVIMELKLLADVGLVGFPNAGKSTLLSAISAA 185 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIADYPFTTL PNLGIV ++G K F++ADIPGII+ A QG G+G RFL+H ER +L Sbjct: 186 KPKIADYPFTTLEPNLGIVSYRDG-KSFVMADIPGIIEGASQGKGLGLRFLRHIERNSLL 244 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L +V A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 245 LFMVPADSDDIRKEYEVLLNELRTFNPEMLDKQRVLAITKSDMLDQELMDEIEPTLPE-- 302 Query: 301 GQVPFEF-SSITGHGIPQILECLHDKI 326 VP F SS++G GI + + L +++ Sbjct: 303 -GVPHIFISSVSGLGISVLKDILWEEL 328 >gi|75907808|ref|YP_322104.1| GTPase ObgE [Anabaena variabilis ATCC 29413] gi|123609987|sp|Q3MCS7|OBG_ANAVT RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|75701533|gb|ABA21209.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC 29413] Length = 342 Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 151/325 (46%), Positives = 225/325 (69%), Gaps = 7/325 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ + +G GG G ++FRREK++ GGP GG+GGRGG V A NL TL+DFR Sbjct: 1 MQFIDQAQIEVEAGKGGDGIVAFRREKYVPAGGPSGGNGGRGGSVVFVAVENLQTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+ FKA G +G N +GA G+D+++ VP GT +++ + L+ DL Q Q++++A G Sbjct: 61 YKHIFKADDGGRGGPNNCTGASGKDLIVQVPCGTTIYDAETGDLLGDLTQPNQQLLIAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN +F S+ N+AP Y+ PG+ G+ K++ L+LKL+A++GIIGLPNAGKST ++S++ Sbjct: 121 GKGGLGNQYFLSNRNRAPEYSLPGLPGERKLLRLELKLLAEVGIIGLPNAGKSTLISSLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V++ + + ADIPG+I+ A GAG+G FL+H ERT V Sbjct: 181 AARPKIADYPFTTLIPNLGVVRKPTGDGTVFADIPGLIEGAADGAGLGHDFLRHIERTRV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ A ++V Y I EL AY L ++++IV L++ID VD +T+ + LATQ Sbjct: 241 LLHLIDATSDDVIRDYNTIEQELQAYGRGLSERMQIVALNKIDAVDRETV--DLDALATQ 298 Query: 300 CGQVP----FEFSSITGHGIPQILE 320 + F S++T G+ +L+ Sbjct: 299 LNHLSHAPVFLISAVTRTGLEPMLQ 323 >gi|90408285|ref|ZP_01216450.1| GTPase Obg [Psychromonas sp. CNPT3] gi|90310586|gb|EAS38706.1| GTPase Obg [Psychromonas sp. CNPT3] Length = 388 Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 153/327 (46%), Positives = 225/327 (68%), Gaps = 8/327 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +GDGG G I FRREK+I GGPDGG GG GGDV+++A NLNTL+DFR Sbjct: 1 MKFVDEAKIKVDAGDGGNGCIGFRREKYIPRGGPDGGDGGDGGDVYLEADENLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + + A+ GE G R+ +G++G+D+V+ VPVGT+ +ED ++ DL EGQ++++A G Sbjct: 61 FIRFYAAERGENGSVRDCTGSRGKDLVIKVPVGTRARDEDTGEILGDLTSEGQKLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FK+STN+AP G LG+ + + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GYHGLGNARFKTSTNRAPRQKTDGTLGEVRNLQLELLLLADVGMLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V G+ + F++ADIPG+I+ A +GAG+G RFL+H ER V Sbjct: 181 AAKPKVADYPFTTLIPNLGVVSMGHGRSFVIADIPGLIEGASEGAGLGTRFLRHLERCRV 240 Query: 240 LLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKK 293 LLH+V L + IL+EL+ ++ +L K + ++ID + D+D + + Sbjct: 241 LLHMVDLLPADGSDPADNAVVILEELAKHSPKLAAKERWLIFNKIDLMPAEDADVIMKTV 300 Query: 294 NELATQCGQVPFEFSSITGHGIPQILE 320 E G V ++ ++I+ G + + Sbjct: 301 IERLEWEGPV-YKVAAISKTGTQAVCQ 326 >gi|298384065|ref|ZP_06993626.1| Obg family GTPase CgtA [Bacteroides sp. 1_1_14] gi|298263669|gb|EFI06532.1| Obg family GTPase CgtA [Bacteroides sp. 1_1_14] Length = 388 Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 147/327 (44%), Positives = 212/327 (64%), Gaps = 7/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+ GGPDGG GGRGG + ++ N TL+ +Y Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYCPNGGPDGGDGGRGGHIILRGNRNYWTLLHLKYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G G D V+ VP GT V+ + +CD+ +GQ +IL GG Sbjct: 66 RHAMAGHGESGSKNRSFGKDGADKVIEVPCGTVVYNAETGEYLCDVTDDGQEVILLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+HFK++T QAP +A PG QE + ++LKL+AD+G++G PNAGKST L++++ A Sbjct: 126 GGQGNSHFKTATRQAPRFAQPGEPMQEMTVIMELKLLADVGLVGFPNAGKSTLLSAISAA 185 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIADYPFTTL PNLGIV ++G K F++ADIPGII+ A QG G+G RFL+H ER +L Sbjct: 186 KPKIADYPFTTLEPNLGIVSYRDG-KSFVMADIPGIIEGASQGKGLGLRFLRHIERNSLL 244 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L +V A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 245 LFMVPADSDDIRKEYEVLLNELRTFNPEMLDKQRVLAITKSDMLDQELMDEIEPTLPE-- 302 Query: 301 GQVPFEF-SSITGHGIPQILECLHDKI 326 VP F SS++G GI + + L +++ Sbjct: 303 -GVPHIFISSVSGLGISVLKDILWEEL 328 >gi|85712487|ref|ZP_01043535.1| GTPase Obg [Idiomarina baltica OS145] gi|85693621|gb|EAQ31571.1| GTPase Obg [Idiomarina baltica OS145] Length = 392 Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 144/305 (47%), Positives = 210/305 (68%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE ++ + +GDGG G ISFRREK+I GGPDGG GG GGDV+++A NLNTLID+R Sbjct: 1 MKFVDEVEIRVEAGDGGNGCISFRREKYIPKGGPDGGDGGDGGDVYLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ +A+ G+ GM +N +G +GED+ L VP GT+ + D +I DL + GQRII+A G Sbjct: 61 FERFHRAERGQNGMSKNCTGKRGEDITLKVPPGTRAKDIDTGEVIGDLTRHGQRIIVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKTNGTPGEVRQLQLELMLLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V+ + F++ADIPG+I+ A +GAG+G +FLKH ER + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVRPAAHHSFVIADIPGLIEGAAEGAGLGIQFLKHLERCRL 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V E + + I++EL Y+ +L +K + ++++D V + ++L Sbjct: 241 LLHLVDLAPFDESDPVEQARVIIEELEKYSPKLAEKPRWLVINKVDLVLEEERQELVDDL 300 Query: 297 ATQCG 301 + G Sbjct: 301 VERLG 305 >gi|86609792|ref|YP_478554.1| GTPase ObgE [Synechococcus sp. JA-2-3B'a(2-13)] gi|123501272|sp|Q2JJ90|OBG_SYNJB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|86558334|gb|ABD03291.1| GTP-binding protein, GTP1/OBG family [Synechococcus sp. JA-2-3B'a(2-13)] Length = 347 Score = 258 bits (659), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 149/327 (45%), Positives = 209/327 (63%), Gaps = 5/327 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D+A++ ++ G+GG G ++FRREK++ GGP GG+GGRGG V + A L TL+DFR Sbjct: 1 MHFIDQAEIEVQGGNGGDGIVAFRREKYVPAGGPSGGNGGRGGSVILVADPGLQTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q KA+HG KG +RSGA G D ++ VP GT VF + L+ DL +G ++++A G Sbjct: 61 FQPVIKAEHGAKGGPNHRSGASGADRLVRVPCGTVVFNAETGELLGDLVGKGDQLLVARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAHF S+ N+AP G G+ + L+LKLIA++GI+GLPNAGKST ++ V+ Sbjct: 121 GKGGLGNAHFLSNHNRAPRQFTKGEAGERVRLRLELKLIAEVGIVGLPNAGKSTLISVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V + + ADIPG+I+ AH G G+G FL+H ERT V Sbjct: 181 SARPKIADYPFTTLQPNLGVVPHPSGDGVVFADIPGLIEGAHLGVGLGHEFLRHVERTRV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V + YQ I EL AY L K +I+ L++ID +D +A + L+ Sbjct: 241 LIHLVDGTAADPVKDYQVIQQELRAYGHGLIDKPQILVLNKIDVLDPQQVAERAQRLSAA 300 Query: 300 CGQVPFEFSSITGHGIPQIL----ECL 322 G S+I G+ +L +CL Sbjct: 301 AGTSVVTISAIAKQGLDPLLQRVWQCL 327 >gi|225175155|ref|ZP_03729151.1| GTP-binding protein Obg/CgtA [Dethiobacter alkaliphilus AHT 1] gi|225169331|gb|EEG78129.1| GTP-binding protein Obg/CgtA [Dethiobacter alkaliphilus AHT 1] Length = 427 Score = 258 bits (659), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 152/322 (47%), Positives = 212/322 (65%), Gaps = 8/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y++ GDGG G ++FRREK++ GGPDGG GGRGGDV ++ L TL+DFRYQ Sbjct: 2 FVDRTKIYVKGGDGGNGIVAFRREKYVPLGGPDGGDGGRGGDVILKVDQGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 QH +A G+ G ++ G D V+ VP GTQV + + +L+ DL +EG+ ++A GG Sbjct: 62 QHIRADRGDHGKGSSKHGKGASDTVVKVPPGTQVRDAETEALLADLTEEGETFVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F SS ++AP YA G G+E+ +WL+LK+IAD+G++G PNAGKSTFL+ V+ A Sbjct: 122 GGRGNSRFASSADKAPKYAEKGEPGEERWVWLELKVIADVGLVGFPNAGKSTFLSRVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PK+ADYPFTTL PNLG+V EG F++ADIPG+I AHQG G+G FL+H ERT +L+ Sbjct: 182 RPKVADYPFTTLAPNLGVVDVEGADPFVIADIPGLITGAHQGVGLGHDFLRHVERTRLLV 241 Query: 242 HIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HIV A + Y I DEL Y+ L + ++V ++ D + D L R + EL Sbjct: 242 HIVDAAGVDGRDPVDDYHQINDELRLYDERLSRLTQVVAANKTDLPQAEDGLNRLRRELG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 F S+ TG G+ ++L Sbjct: 302 EDN---VFPISAATGAGVRELL 320 >gi|319944643|ref|ZP_08018910.1| Spo0B-associated GTP-binding protein [Lautropia mirabilis ATCC 51599] gi|319742082|gb|EFV94502.1| Spo0B-associated GTP-binding protein [Lautropia mirabilis ATCC 51599] Length = 377 Score = 258 bits (659), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 155/337 (45%), Positives = 233/337 (69%), Gaps = 7/337 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +G GG G SFRREKFI +GGPDGG GGRGG + +A N+NTLIDFR Sbjct: 1 MKFIDEARIEVIAGAGGNGAASFRREKFIPYGGPDGGDGGRGGSILAEADRNINTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + ++A+ GE G ++ G G+D+VL +PVGTQ+ +ED L+ DL G+R++LA G Sbjct: 61 YTRKYQARRGENGRGSDQYGKGGDDIVLRMPVGTQIHDEDTGELLFDLTTHGERVVLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSSTN+AP + PG G+E+ + L+LK++AD+G++G+PNAGKSTF++ V+ Sbjct: 121 GDGGLGNLHFKSSTNRAPRKSTPGWPGEERRLKLELKVLADVGLLGMPNAGKSTFISQVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL+PNLG+V+ E + F++AD+PG+I A +GAG+G RFL+H +RT + Sbjct: 181 NARPKVADYPFTTLHPNLGVVRVEDSRSFVVADVPGLIGGAAEGAGLGHRFLRHLQRTRL 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +V + I++EL Y+ L +K + L+++D + + + + Sbjct: 241 LLHLVDIFPFDPDRDVVDEAKTIVEELRKYDPALYEKPRWLVLNKVDMMSPEAVDEVRER 300 Query: 296 LATQCG-QVP-FEFSSITGHGIPQILECLHDKIFSIR 330 L + Q P F S+I G G ++ + D + S+R Sbjct: 301 LVKELDWQGPVFCISAIAGQGCRELCYAIWDYLESLR 337 >gi|251772043|gb|EES52615.1| GTP binding protein [Leptospirillum ferrodiazotrophum] Length = 349 Score = 258 bits (659), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 148/330 (44%), Positives = 214/330 (64%), Gaps = 8/330 (2%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+DE + + SG GG G SFRREKF+ GGPDGG GG GG + + T + +TL+DF++ Sbjct: 3 QFVDEVTLRVASGKGGDGSASFRREKFVPRGGPDGGDGGNGGSIILCGTPDRSTLLDFKH 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + A GE G + + G GED+VL VP+GTQVF+ + +L+ D+ EGQ + APGG Sbjct: 63 RPRVVATAGENGRGKKQHGKNGEDLVLLVPLGTQVFDSETGNLLADIVTEGQLFVAAPGG 122 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN HF + T QAP +A PG E + L+LK++A +G++G PNAGKSTFL +TR Sbjct: 123 RGGRGNVHFATPTRQAPDFAEPGKPAVEITLRLELKVMAKVGLLGFPNAGKSTFLGRITR 182 Query: 182 AKPKIADYPFTTLYPNLGIVKEG----YKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 A P+I YPFTTL+P+LG+V G +E+++AD+PG+I+ AH+G G+GDRFL+H ERT Sbjct: 183 AHPRIGSYPFTTLHPHLGVVTRGSFPEIREYVVADLPGLIEGAHEGKGLGDRFLRHVERT 242 Query: 238 HVLLHIVSALEE---NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 VLLH + E + + +Y+ I +EL+ Y+ L K E V ++ D+ D + + Sbjct: 243 QVLLHFIDVSYEGPADPEESYRIIRNELALYDPRLLDKPEQVAATKADSADPERV-EAFL 301 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHD 324 + + G+ P+ SS TG GIP+IL L + Sbjct: 302 DFCRRTGRTPYLLSSQTGEGIPEILNALDN 331 >gi|260682769|ref|YP_003214054.1| Spo0B-associated GTP-binding protein [Clostridium difficile CD196] gi|260686367|ref|YP_003217500.1| Spo0B-associated GTP-binding protein [Clostridium difficile R20291] gi|260208932|emb|CBA61941.1| Spo0B-associated GTP-binding protein [Clostridium difficile CD196] gi|260212383|emb|CBE03216.1| Spo0B-associated GTP-binding protein [Clostridium difficile R20291] Length = 428 Score = 258 bits (659), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 148/322 (45%), Positives = 220/322 (68%), Gaps = 6/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+A++++++G+GG G ++FRREK++ GGPDGG GGRG + + L TL+DF+YQ Sbjct: 5 FIDKARIFVKAGNGGNGSVAFRREKYVPAGGPDGGDGGRGASIIFEVDLGLRTLMDFKYQ 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + ++AQ+G G K R+G GE++VL VP GT + +E ++ DL +EG I+A GG Sbjct: 65 KKYQAQNGGDGSKGKRAGKNGENLVLKVPAGTVIRDEATGLVLADLKKEGDTAIVAKGGI 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF ++ QAP +A G G+E+ I L+LK+IAD+G++G PN GKSTFL+ VT+A Sbjct: 125 GGKGNQHFANAVRQAPAFAKSGTDGEERWITLELKMIADVGLLGFPNVGKSTFLSVVTKA 184 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V+ + + F+LADIPGII+ A +G G+G FL+H ERT VL+ Sbjct: 185 KPKIANYHFTTLTPNLGVVQTKFGDSFVLADIPGIIEGASEGIGLGHEFLRHVERTKVLI 244 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK-KNELA 297 HIV S LE + + I DEL YN +L K+ ++V ++ D ++ ++ K K+EL Sbjct: 245 HIVDISGLEGRDPIEDFDKINDELKLYNEKLSKRPQVVVANKFDILEDESKFEKFKSELE 304 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + G F+ S+ T GI +++ Sbjct: 305 GR-GYTVFKMSAATRQGIDEVI 325 >gi|56459588|ref|YP_154869.1| GTPase ObgE [Idiomarina loihiensis L2TR] gi|81821763|sp|Q5R039|OBG_IDILO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|56178598|gb|AAV81320.1| GTPase Obg [Idiomarina loihiensis L2TR] Length = 384 Score = 258 bits (659), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 146/321 (45%), Positives = 220/321 (68%), Gaps = 8/321 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE ++ + +GDGG G ISFRREK+I GGPDGG GG GGDV+++A NLNTLID+R Sbjct: 1 MKFVDEVEIRVDAGDGGNGCISFRREKYIPKGGPDGGDGGDGGDVYLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ KA+ G+ GM +N +G +G D+VL VP GT+ + D ++ DL + GQR+++A G Sbjct: 61 FERFHKAERGKNGMGKNCTGRRGNDIVLPVPPGTRATDIDTGEVLGDLTKHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSINRAPRQKTDGTPGEVRPLKLELMLLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V+ ++ F++ADIPG+I+ A +GAG+G +FLKH ER + Sbjct: 181 AARPKVADYPFTTLIPNLGVVRPAPHQSFVIADIPGLIEGAAEGAGLGIQFLKHLERCRL 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V E + + I++EL Y+ +L +K + ++++D + + + K +EL Sbjct: 241 LLHLVDLAPFDETDPAEQARIIINELEKYSPKLAEKPRWLVINKVDLLLDEEVQEKVDEL 300 Query: 297 ATQC---GQVPFEFSSITGHG 314 G V F+ +++ G G Sbjct: 301 VKSLNWDGPV-FQIAALEGRG 320 >gi|295135726|ref|YP_003586402.1| GTPase ObgE [Zunongwangia profunda SM-A87] gi|294983741|gb|ADF54206.1| GTPase ObgE [Zunongwangia profunda SM-A87] Length = 325 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 150/309 (48%), Positives = 207/309 (66%), Gaps = 7/309 (2%) Query: 23 FRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAK 82 REK++ GGPDGG GGRGG V ++ NL TL +F +++H +A+HG G K+ SGA Sbjct: 13 LHREKYVAKGGPDGGDGGRGGHVILRGNKNLWTLFEFSFRRHIRAEHGGNGGKQRSSGAD 72 Query: 83 GEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYAN 142 G+D ++ VP+GT + + + +I ++ ++GQ II+A GG GG GN HFK+STNQ P Y+ Sbjct: 73 GQDEIVDVPLGTVIRDTETEEIIDEVTEDGQEIIIAEGGMGGRGNWHFKTSTNQTPRYSQ 132 Query: 143 PGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK 202 PGI GQE I L+LK++AD+G++G PNAGKST L+ +T AKPKIADY FTTL PNLGIVK Sbjct: 133 PGIDGQELDITLELKVLADVGLVGFPNAGKSTLLSVITSAKPKIADYEFTTLKPNLGIVK 192 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDE 261 +K F++ADIPGII+ A +G G+G RFL+H ER LL +V A ENV Y+ +LDE Sbjct: 193 YRDFKSFVVADIPGIIEGAAEGKGLGYRFLRHIERNSTLLFLVPADAENVAKEYEILLDE 252 Query: 262 LSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILE 320 L YN E+ K +V +S+ D +D + A K EL VP+ F SS+ G+ + Sbjct: 253 LRRYNPEMLDKDRLVAVSKTDMLDDELKAELKAELDENL-PVPYLFISSVAQQGLTE--- 308 Query: 321 CLHDKIFSI 329 L DK++ + Sbjct: 309 -LKDKLWEM 316 >gi|315924338|ref|ZP_07920561.1| Spo0B-associated GTP-binding protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315622409|gb|EFV02367.1| Spo0B-associated GTP-binding protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 434 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 146/324 (45%), Positives = 219/324 (67%), Gaps = 8/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 +D+ ++Y+++G GG GG++F R K+I GGPDGG+GG+GGDV +QAT L TL F+Y+ Sbjct: 1 MIDQVQIYVKAGHGGHGGMTFHRAKYIPKGGPDGGNGGKGGDVILQATRGLRTLAPFKYK 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA +G+ G SG GE++++ VPVGT V + ++CDL+++ Q+ +A GG Sbjct: 61 KKYKAGNGDDGSASKSSGKMGENIIVHVPVGTIVKDRSTGRVLCDLNKDEQQCTVAKGGR 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +F +ST Q+P +A G G+EK + L+LKL+AD+G++GLPN GKSTFL+ VT+A Sbjct: 121 GGLGNYNFTTSTRQSPRFAQGGSKGEEKTLILELKLLADVGLLGLPNVGKSTFLSIVTKA 180 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 PKI +YPFTTL PNLG+V+ + + F++ADIPG+I+ A +GAGIG FL+H ERT +L+ Sbjct: 181 NPKIGNYPFTTLEPNLGVVEWKNFDTFVVADIPGVIEGASEGAGIGLSFLRHVERTKMLI 240 Query: 242 HIVSALEENVQAA------YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 H + E+ A + I EL+AY+ +L++K +IV L++ D D + R K Sbjct: 241 HFLDVSEDCFAAGRDPLEDFNTINRELAAYSDQLKQKPQIVALTKCDVSDERKIQRVKET 300 Query: 296 LATQCGQVPFEFSSITGHGIPQIL 319 L + +V F SS+T GI +L Sbjct: 301 LELKGYEV-FCISSVTRDGIDALL 323 >gi|298481529|ref|ZP_06999721.1| Obg family GTPase CgtA [Bacteroides sp. D22] gi|298272393|gb|EFI13962.1| Obg family GTPase CgtA [Bacteroides sp. D22] Length = 387 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 145/326 (44%), Positives = 210/326 (64%), Gaps = 5/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+ GGPDGG GGRGG + ++ N TL+ +Y Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYCPNGGPDGGDGGRGGHIILRGNRNYWTLLHLKYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G G D ++ VP GT V+ + +CD+ ++GQ ++L GG Sbjct: 66 RHAMAGHGESGSKGRSFGKDGADKIIEVPCGTVVYNAETGEYLCDVTEDGQEVVLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + ++LKL+AD+G++G PNAGKST L+S++ A Sbjct: 126 GGQGNWHFKTATRQAPRFAQPGEPMQEMTVIMELKLLADVGLVGFPNAGKSTLLSSISAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADYPFTTL PNLGIV G K F++ADIPGII+ A QG G+G RFL+H ER +LL Sbjct: 186 KPKIADYPFTTLEPNLGIVSYHGGKSFVMADIPGIIEGASQGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 246 FMVPADSDDIRKEYEVLLNELRTFNPEMLDKQRVLAVTKSDMLDQELMDEIEPTLPE--- 302 Query: 302 QVPFEF-SSITGHGIPQILECLHDKI 326 +P F SS++G GI + + L +++ Sbjct: 303 GIPHVFISSVSGLGISVLKDILWEEL 328 >gi|295695353|ref|YP_003588591.1| GTP-binding protein Obg/CgtA [Bacillus tusciae DSM 2912] gi|295410955|gb|ADG05447.1| GTP-binding protein Obg/CgtA [Bacillus tusciae DSM 2912] Length = 439 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 149/329 (45%), Positives = 219/329 (66%), Gaps = 8/329 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + ++D A++Y++ GDGG G +SFRREK++ GGP GG GGRGGDV +Q L TLIDFR Sbjct: 6 IMWIDTAEIYVKGGDGGNGIVSFRREKYVPMGGPAGGDGGRGGDVILQVDEGLRTLIDFR 65 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ+HFKA+ GE G +N+ G +D+V+ VP GT V + ++ DL + GQR+++A G Sbjct: 66 YQRHFKAERGENGKPKNQHGKSADDLVIKVPPGTVVRDRGSGRILGDLTRHGQRLVVARG 125 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ + N+AP A G G+E+ I L+LK++AD+G++GLP+ GKST LASVT Sbjct: 126 GRGGRGNAHYATPQNKAPRMAENGEPGEERWIVLELKVLADVGLVGLPSVGKSTLLASVT 185 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V G + F++AD+PG+I+ AH G G+G +FL+H ERT V Sbjct: 186 AAKPKIADYPFTTLSPNLGVVDVGDGRSFVMADLPGLIEGAHAGQGLGHQFLRHVERTRV 245 Query: 240 LLHIVSALEENVQAAY---QCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 ++H+V + Y + I +EL Y+ L ++++IV +++D + + Sbjct: 246 IVHVVDMASPEGRDPYGDWKQINEELRLYDPRLLERVQIVAANKMDLPGA---GERLQAF 302 Query: 297 ATQCGQVP-FEFSSITGHGIPQILECLHD 324 + G VP F S+ TG G+ +++ + D Sbjct: 303 RERVGDVPVFPISAATGEGVRELIYFVAD 331 >gi|317154571|ref|YP_004122619.1| GTP-binding protein Obg/CgtA [Desulfovibrio aespoeensis Aspo-2] gi|316944822|gb|ADU63873.1| GTP-binding protein Obg/CgtA [Desulfovibrio aespoeensis Aspo-2] Length = 342 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 153/343 (44%), Positives = 227/343 (66%), Gaps = 12/343 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + +RSG GG G S RE + GGPDGG GGRGGDV + T L +L DFR Sbjct: 1 MRFVDEATILVRSGKGGNGCASLHREANVPKGGPDGGDGGRGGDVIFRGTVRLMSLYDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE----EDGI---SLICDLDQEGQ 113 +H+ A++G+ GM R+R G +++ +PVGT V+E EDG LI DL ++G Sbjct: 61 LHRHYYAKNGQSGMGRDRYGKAAPTLMVDLPVGTLVYEMVELEDGSIQEKLIADLVEDGT 120 Query: 114 RIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKS 173 +++ GG+GG GN HFKSS N+ P +A PG G+EK I L+LK++AD+G++GLPNAGKS Sbjct: 121 EVVICKGGDGGRGNLHFKSSVNRTPRFAEPGWPGEEKQIRLELKILADVGLLGLPNAGKS 180 Query: 174 TFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLK 232 TF++ V+ AKPKIA YPFTTL+PNLG+++ + ++ ++ADIPG+I+ A G G+G FLK Sbjct: 181 TFISQVSAAKPKIAAYPFTTLHPNLGVIENDEFERMVIADIPGLIEGASAGLGLGITFLK 240 Query: 233 HTERTHVLLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 H ERT L+HI++A + +N Y + EL Y+ EL +K +I +++IDT+ D L Sbjct: 241 HVERTRFLVHILAAEDLNRDNPADGYDMLNQELHEYSPELAQKTQIRVINKIDTLGDDEL 300 Query: 290 ARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 A ++++ GQ F S++TG G+ +++ + + I G+ Sbjct: 301 AEIRSKVEG-TGQKVFFISALTGQGVDKLVAEMWRTLAFIDGK 342 >gi|126698759|ref|YP_001087656.1| Spo0B-associated GTP-binding protein [Clostridium difficile 630] gi|254974698|ref|ZP_05271170.1| Spo0B-associated GTP-binding protein [Clostridium difficile QCD-66c26] gi|255092087|ref|ZP_05321565.1| Spo0B-associated GTP-binding protein [Clostridium difficile CIP 107932] gi|255100178|ref|ZP_05329155.1| Spo0B-associated GTP-binding protein [Clostridium difficile QCD-63q42] gi|255313824|ref|ZP_05355407.1| Spo0B-associated GTP-binding protein [Clostridium difficile QCD-76w55] gi|255516505|ref|ZP_05384181.1| Spo0B-associated GTP-binding protein [Clostridium difficile QCD-97b34] gi|255649605|ref|ZP_05396507.1| Spo0B-associated GTP-binding protein [Clostridium difficile QCD-37x79] gi|306519728|ref|ZP_07406075.1| Spo0B-associated GTP-binding protein [Clostridium difficile QCD-32g58] gi|123174515|sp|Q18B27|OBG_CLOD6 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|115250196|emb|CAJ68017.1| Spo0B-associated GTP-binding protein [Clostridium difficile] Length = 425 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 148/322 (45%), Positives = 220/322 (68%), Gaps = 6/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+A++++++G+GG G ++FRREK++ GGPDGG GGRG + + L TL+DF+YQ Sbjct: 2 FIDKARIFVKAGNGGNGSVAFRREKYVPAGGPDGGDGGRGASIIFEVDLGLRTLMDFKYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + ++AQ+G G K R+G GE++VL VP GT + +E ++ DL +EG I+A GG Sbjct: 62 KKYQAQNGGDGSKGKRAGKNGENLVLKVPAGTVIRDEATGLVLADLKKEGDTAIVAKGGI 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF ++ QAP +A G G+E+ I L+LK+IAD+G++G PN GKSTFL+ VT+A Sbjct: 122 GGKGNQHFANAVRQAPAFAKSGTDGEERWITLELKMIADVGLLGFPNVGKSTFLSVVTKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V+ + + F+LADIPGII+ A +G G+G FL+H ERT VL+ Sbjct: 182 KPKIANYHFTTLTPNLGVVQTKFGDSFVLADIPGIIEGASEGIGLGHEFLRHVERTKVLI 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK-KNELA 297 HIV S LE + + I DEL YN +L K+ ++V ++ D ++ ++ K K+EL Sbjct: 242 HIVDISGLEGRDPIEDFDKINDELKLYNEKLSKRPQVVVANKFDILEDESKFEKFKSELE 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + G F+ S+ T GI +++ Sbjct: 302 GR-GYTVFKMSAATRQGIDEVI 322 >gi|45644731|gb|AAS73119.1| probable GTP-binding protein [uncultured marine gamma proteobacterium EBAC20E09] Length = 338 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 146/334 (43%), Positives = 218/334 (65%), Gaps = 8/334 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DEA + I++GDGG+G SFRREK+I FGGPDGG GG+GGD++ + + N+NTL+DF+ Sbjct: 1 MNFIDEAYLEIKAGDGGSGASSFRREKYIPFGGPDGGDGGKGGDIYFKVSLNINTLVDFQ 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ F AQ+G++G +N+ GA G+D+++ +P GT +++ + + D E ++A G Sbjct: 61 NKKVFNAQNGQRGAGKNKFGAAGDDLIIEIPKGTVIYDNNTNEELIDCTDESSNYLIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNA FKSSTNQAP PG G+ + + L+LK +AD+G++G PNAGKSTFL +V+ Sbjct: 121 GDGGLGNAKFKSSTNQAPRKCTPGFEGERRSLRLELKSLADVGLVGFPNAGKSTFLNTVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKI DYPFTTL P+LG +K +++ADIPG+I+ A GAG+G +FLKH RT +L Sbjct: 181 SAKPKIGDYPFTTLRPHLGAIKGKESSYVIADIPGLIEGASDGAGLGIKFLKHISRTGIL 240 Query: 241 LHIVSALE-ENVQAAYQCIL--DELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 L V EN++ Q IL EL ++ L +K+ + ++ID + + E+ Sbjct: 241 LIFVDLFSLENIEPIDQVILLKKELDSFGDNLTQKVSWIVCNKIDLLQETKINEISKEIE 300 Query: 298 TQCGQVP----FEFSSITGHGIPQILECLHDKIF 327 + QV F S+ TG G +L+ L +I+ Sbjct: 301 EKL-QVTKEEIFFISAATGEGTEFLLKSLESEIY 333 >gi|237809120|ref|YP_002893560.1| GTPase ObgE [Tolumonas auensis DSM 9187] gi|237501381|gb|ACQ93974.1| GTP-binding protein Obg/CgtA [Tolumonas auensis DSM 9187] Length = 393 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 148/325 (45%), Positives = 219/325 (67%), Gaps = 8/325 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE V + +GDGG G +SFRREK++ GGPDGG GG GGDV++ A +NLNTLID+R Sbjct: 1 MKFVDEVLVRVEAGDGGNGCVSFRREKYVPNGGPDGGDGGDGGDVYLLADNNLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ GE G N +GA+G+D+VLTVPVGT+ +ED ++ DL + G R+++A G Sbjct: 61 FERFHMAERGENGRGANCTGARGKDLVLTVPVGTRATDEDTGEVLGDLTKHGDRLLIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + ++L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKTMGTKGEQRNLKMELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V+ G + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AARPKVADYPFTTLVPNLGVVRVGTQRSFVIADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKK 293 LLH+V E + + I+ EL Y+ +L K + +++D + +++ + ++ Sbjct: 241 LLHLVDICPVDESDPAENAKVIIHELEKYSPKLASKPRWLVFNKMDLMLEDEAEEVIQRV 300 Query: 294 NELATQCGQVPFEFSSITGHGIPQI 318 E G+V F S++ G I Sbjct: 301 MEALEWEGEV-FRISAVNKEGTAPI 324 >gi|325267514|ref|ZP_08134167.1| GTP-binding protein Obg/CgtA [Kingella denitrificans ATCC 33394] gi|324981039|gb|EGC16698.1| GTP-binding protein Obg/CgtA [Kingella denitrificans ATCC 33394] Length = 379 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 141/306 (46%), Positives = 207/306 (67%), Gaps = 5/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + G GG G SFRREKF+ GGPDGG GGRGG V+ A N+NTL+++R Sbjct: 1 MKFIDEAKIEVSGGRGGNGAASFRREKFVPRGGPDGGDGGRGGSVFAVADENVNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+ L +PVGT + + D ++ DL GQR+ +A G Sbjct: 61 FVKKYQAKNGEKGHGSDRYGAGADDIELHMPVGTLIRDADTDEIVADLTYHGQRVCVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP G G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQFTNGEEGEARTLLLELKVLADVGLLGMPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKVADYPFTTLHPNLGVVRMDENNSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E A + I++EL Y+ EL K + L+++D +D R+ + Sbjct: 241 LLHVVDLAPFDETTDTAAEALAIINELRKYDEELYGKPRWLVLNKLDMLDEAEAQRRTAD 300 Query: 296 LATQCG 301 G Sbjct: 301 FLAAIG 306 >gi|311693398|gb|ADP96271.1| GTPase ObgE [marine bacterium HP15] Length = 397 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 148/328 (45%), Positives = 217/328 (66%), Gaps = 6/328 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G +SFRREK++ GGPDGG GG GG V+++A +LNTLID+R Sbjct: 1 MKFVDEATIIVEAGKGGHGCLSFRREKYVPKGGPDGGDGGDGGSVYLEAEESLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ KAQ+GE G RN +G KGED+VL VPVGT V + D ++ DL GQR+ +A G Sbjct: 61 FQRKHKAQNGEPGSGRNCTGNKGEDLVLPVPVGTTVVDMDTHEVLGDLTHAGQRLKVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+LK++AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQTTKGSEGELRNLRLELKVLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V + ++ F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKVADYPFTTLVPNLGVVSVQAHQSFVIADIPGLIEGAAEGAGLGIRFLKHLVRTRL 240 Query: 240 LLHIVSALEENVQA---AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V + + A + I EL ++ L + + L+++D V + + Sbjct: 241 LLHLVDVAPYDGSSPADAVRAIEHELEKFSETLANRPRWLVLNKVDMVAEEDRDAHCQAI 300 Query: 297 ATQCG-QVP-FEFSSITGHGIPQILECL 322 + G + P F S+++G G + + + Sbjct: 301 VDELGWEGPVFWISALSGEGTKSLAQAV 328 >gi|329893640|ref|ZP_08269774.1| GTP-binding protein Obg [gamma proteobacterium IMCC3088] gi|328923567|gb|EGG30879.1| GTP-binding protein Obg [gamma proteobacterium IMCC3088] Length = 395 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 143/336 (42%), Positives = 225/336 (66%), Gaps = 6/336 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G+GG G +SFRREK+I GGPDGG GG GG V+++A NLNT++D+R Sbjct: 1 MKFVDEAIIEVAAGNGGNGCLSFRREKYIPKGGPDGGDGGDGGSVFLEADENLNTMVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ F+A +G G RN G GED++L VPVGT V + D ++ DL + GQ++ +A G Sbjct: 61 FQRKFRAVNGAPGQGRNCRGRSGEDLILKVPVGTTVIDIDTDEVLGDLSEAGQQLKVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP +PG G+++ + L+LK++AD+G++G+PNAGKST + +++ Sbjct: 121 GFHGLGNTRFKSSINRAPRQTSPGSEGEKRRLKLELKVLADVGLLGMPNAGKSTLIRAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTT+ PNLG+V+ + + F++ADIPG+I+ A +GAG+G RFLKH R + Sbjct: 181 AAKPKVADYPFTTMVPNLGVVRVDPLRSFVVADIPGLIEGAAEGAGLGIRFLKHLTRNRL 240 Query: 240 LLHIV--SALEENVQAAYQC-ILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V + ++ A + C I+ E+ +++ L + + L++ D +D +T ++ E+ Sbjct: 241 LLHLVDLAPWDDEAPAEHACAIVREIESFSPLLAARPRWLVLNKADALDDETRDQRAQEV 300 Query: 297 ATQCG-QVP-FEFSSITGHGIPQILECLHDKIFSIR 330 Q P F S++ G G + + + ++ R Sbjct: 301 IDALDWQGPVFVISALAGEGTEALCQAIMTQLEEWR 336 >gi|254368934|ref|ZP_04984947.1| GTP1/Obg family GTP-binding protein [Francisella tularensis subsp. holarctica FSC022] gi|157121855|gb|EDO66025.1| GTP1/Obg family GTP-binding protein [Francisella tularensis subsp. holarctica FSC022] Length = 334 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 143/304 (47%), Positives = 200/304 (65%), Gaps = 4/304 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE + +++G GG G +SFRREK++ GGPDGG GG GG ++++A N+NTLID+R Sbjct: 1 MRFVDEVVIKLQAGKGGNGCVSFRREKYVPCGGPDGGDGGNGGSIYLKADENVNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ + A++G G RN G GED+ L VPVGT VF+ D I ++ Q GQ L G Sbjct: 61 YKREYYAENGRPGEGRNYYGKAGEDLYLVVPVGTSVFDIDTNKKIGEVLQHGQTFKLVSG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN HFKSSTNQAP G G+ K + L+L L+AD+ ++GLPNAGKST + SV+ Sbjct: 121 GKRGIGNTHFKSSTNQAPRKFTLGEEGEYKEVRLELNLLADVALLGLPNAGKSTLIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PK+ADYPFTT+YP+LG+VK G F++ADIPG+I+ A +GAG+G RFLKH R + Sbjct: 181 EATPKVADYPFTTMYPHLGVVKVGVDSFVMADIPGVIEGAAEGAGLGLRFLKHLTRARCV 240 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH+V E + Y + EL Y+ EL K+ + +++ID + +D + +K E Sbjct: 241 LHVVDICPFNESDPVENYFAVEKELEKYSQELFDKLRFLVINKIDLL-ADKVEQKCQEFV 299 Query: 298 TQCG 301 Q G Sbjct: 300 EQIG 303 >gi|218960464|ref|YP_001740239.1| DNA-binding GTPase involved in cell partioning [Candidatus Cloacamonas acidaminovorans] gi|167729121|emb|CAO80032.1| DNA-binding GTPase involved in cell partioning [Candidatus Cloacamonas acidaminovorans] Length = 336 Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 149/334 (44%), Positives = 223/334 (66%), Gaps = 11/334 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A++ I+SG+GG G ISFRREK++ GGPDGG GGRGGDV SNLNTL+D+RY Sbjct: 2 FIDYARIKIKSGNGGDGTISFRREKYVPKGGPDGGDGGRGGDVIAIGDSNLNTLLDYRYH 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVF--EEDGISLICDLDQEGQRIILAPG 120 + FKA +G+ G ++G+ G + +L +P+GT+++ EE+ + D+ Q G+++IL+ G Sbjct: 62 KIFKAGNGKPGAGAKKTGSSGANCILHLPLGTEIYVLEENKKYKLADITQAGEKVILSAG 121 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN +F + TNQAP A PG+ +E + L LKL+AD+G++G PNAGKST L+ ++ Sbjct: 122 GSGGKGNYNFATPTNQAPRIATPGVKTEEMELELVLKLMADVGLVGFPNAGKSTLLSVLS 181 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADY FTTL P LG+V Y+ F++ADIPGIIK AH G G+GD+FL+H +RTH+ Sbjct: 182 SARPKIADYEFTTLEPMLGVVYISDYQNFVMADIPGIIKGAHLGKGLGDQFLRHIQRTHL 241 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK----KNE 295 LL ++ + AY+ + EL Y+S + KK ++ +S+ DT+ + L +K +N Sbjct: 242 LLFLIDIATPDPLEAYRTLRSELYLYDSFMDKKPHLIVISKTDTLSPEDLKQKLTEIRNA 301 Query: 296 LATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 + F S+++ G L+ L KI++I Sbjct: 302 FKKEYNDEIFAISAVSKDG----LDELKYKIYNI 331 >gi|89257126|ref|YP_514488.1| GTPase ObgE [Francisella tularensis subsp. holarctica LVS] gi|115315474|ref|YP_764197.1| GTPase ObgE [Francisella tularensis subsp. holarctica OSU18] gi|156503347|ref|YP_001429412.1| GTPase ObgE [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009523|ref|ZP_02274454.1| GTP-binding protein Obg/CgtA [Francisella tularensis subsp. holarctica FSC200] gi|254368353|ref|ZP_04984371.1| GTP-binding protein [Francisella tularensis subsp. holarctica 257] gi|290954567|ref|ZP_06559188.1| GTPase ObgE [Francisella tularensis subsp. holarctica URFT1] gi|295311991|ref|ZP_06802812.1| GTPase ObgE [Francisella tularensis subsp. holarctica URFT1] gi|122324541|sp|Q0BK24|OBG_FRATO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|122500180|sp|Q2A1B4|OBG_FRATH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266795|sp|A7NEQ3|OBG_FRATF RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|89144957|emb|CAJ80313.1| GTP-binding protein [Francisella tularensis subsp. holarctica LVS] gi|115130373|gb|ABI83560.1| GTP1/Obg family GTP-binding protein [Francisella tularensis subsp. holarctica OSU18] gi|134254161|gb|EBA53255.1| GTP-binding protein [Francisella tularensis subsp. holarctica 257] gi|156253950|gb|ABU62456.1| GTP-binding protein Obg/CgtA [Francisella tularensis subsp. holarctica FTNF002-00] Length = 334 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 143/304 (47%), Positives = 200/304 (65%), Gaps = 4/304 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE + +++G GG G +SFRREK++ GGPDGG GG GG ++++A N+NTLID+R Sbjct: 1 MRFVDEVVIKLQAGKGGNGCVSFRREKYVPCGGPDGGDGGNGGSIYLKADENVNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ + A++G G RN G GED+ L VPVGT VF+ D I ++ Q GQ L G Sbjct: 61 YKREYYAENGRPGEGRNCYGKAGEDLYLVVPVGTSVFDIDTNKKIGEVLQHGQTFKLVSG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN HFKSSTNQAP G G+ K + L+L L+AD+ ++GLPNAGKST + SV+ Sbjct: 121 GKRGIGNTHFKSSTNQAPRKFTLGEEGEYKEVRLELNLLADVALLGLPNAGKSTLIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PK+ADYPFTT+YP+LG+VK G F++ADIPG+I+ A +GAG+G RFLKH R + Sbjct: 181 EATPKVADYPFTTMYPHLGVVKVGVDSFVMADIPGVIEGAAEGAGLGLRFLKHLTRARCV 240 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH+V E + Y + EL Y+ EL K+ + +++ID + +D + +K E Sbjct: 241 LHVVDICPFNESDPVENYFAVEKELEKYSQELFDKLRFLVINKIDLL-ADKVEQKCQEFV 299 Query: 298 TQCG 301 Q G Sbjct: 300 EQIG 303 >gi|295097671|emb|CBK86761.1| Obg family GTPase CgtA [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 391 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 207/290 (71%), Gaps = 6/290 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPRGGPDGGDGGDGGDVWLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN+ FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNSRFKSSVNRTPRQKTMGTPGDKRDLQLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ + V+ A + I+ EL Y+ +L +K + ++ID +D Sbjct: 241 LLHLIDIDPIDGSDPVENA-RIIIGELEKYSEKLAQKPRWLVFNKIDLMD 289 >gi|126666694|ref|ZP_01737671.1| predicted GTPase [Marinobacter sp. ELB17] gi|126628739|gb|EAZ99359.1| predicted GTPase [Marinobacter sp. ELB17] Length = 397 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 148/329 (44%), Positives = 218/329 (66%), Gaps = 8/329 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G +SFRREK++ GGPDGG GG GG V+++A LNTLID+R Sbjct: 1 MKFVDEATIIVEAGTGGHGCLSFRREKYVPRGGPDGGDGGDGGSVYLEANDALNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ +A +GE+G RN +G KGED+VL VPVGT + + D ++ DL + GQR +A G Sbjct: 61 FQRQHRAHNGEQGSGRNCTGTKGEDLVLPVPVGTTIVDMDTHEVLGDLTRIGQRQKVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP + G G+ + + L+LK++AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSINRAPRQTSKGSEGETRNLRLELKVLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTL PNLG+V+ + ++ F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AATPKVADYPFTTLVPNLGVVRVQNHQSFVIADIPGLIEGAAEGAGLGIRFLKHLVRTRL 240 Query: 240 LLHIVS-ALEENVQAAY--QCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V A + AY + I EL ++ L + + L+++D V D + + Sbjct: 241 LLHLVDVAPYDGSSPAYAVKAIAHELEKFSETLANRDRWLVLNKVDMVPEDEREDRCQAI 300 Query: 297 ATQC---GQVPFEFSSITGHGIPQILECL 322 + G V F S+++G G + + + Sbjct: 301 VDELEWKGPV-FSISALSGEGTKPLTQAV 328 >gi|283836271|ref|ZP_06356012.1| Obg family GTPase CgtA [Citrobacter youngae ATCC 29220] gi|291067633|gb|EFE05742.1| Obg family GTPase CgtA [Citrobacter youngae ATCC 29220] Length = 390 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 205/290 (70%), Gaps = 6/290 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTMGTPGDKRDLMLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D Sbjct: 241 LLHLIDIDPIDGSDPVENA-RIIIGELEKYSQDLASKPRWLVFNKIDLLD 289 >gi|299769177|ref|YP_003731203.1| GTPase ObgE [Acinetobacter sp. DR1] gi|298699265|gb|ADI89830.1| GTPase ObgE [Acinetobacter sp. DR1] Length = 406 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 152/333 (45%), Positives = 226/333 (67%), Gaps = 8/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + + +GDGG G SFRREKF+ FGGPDGG GGRGG ++IQA + +TL+D+R Sbjct: 1 MRFVDEAVITVEAGDGGNGVASFRREKFVPFGGPDGGDGGRGGSIYIQADDDTSTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+A+ G+ G N +G GEDVVL VPVGT + + D +I DL ++GQRI++A G Sbjct: 61 YTRKFRAERGKNGAGANCTGRGGEDVVLKVPVGTTIVDTDSGDIIGDLVEDGQRILVAGG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSSTN+AP GI G+ + I L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GDGGLGNTHFKSSTNRAPRKCTTGIKGEFREIRLELKVLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTT+ PNLG+V + ++ F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTMVPNLGVVDADRHRSFVMADIPGLIEGAAEGAGLGIRFLKHLARTRI 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHI+ + + I++EL+ ++ L K ++ L+++D + ++ + Sbjct: 241 LLHIIDVQPIDGSDPAHNAKAIMNELAKFSPTLAKLPIVLVLNKLDQIAEESREEWCQHI 300 Query: 297 ATQ---CGQVPFEFSSITGHGIPQILECLHDKI 326 + G V F+ S + G ++ L D+I Sbjct: 301 LDELEWTGPV-FKTSGLLSEGTKDVVYYLMDQI 332 >gi|237730103|ref|ZP_04560584.1| GTPase ObgE [Citrobacter sp. 30_2] gi|226908709|gb|EEH94627.1| GTPase ObgE [Citrobacter sp. 30_2] Length = 390 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 205/290 (70%), Gaps = 6/290 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTMGTPGDKRDLMLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D Sbjct: 241 LLHLIDIDPIDGSDPVENA-RIIIGELEKYSQDLASKPRWLVFNKIDLMD 289 >gi|327404015|ref|YP_004344853.1| GTPase obg [Fluviicola taffensis DSM 16823] gi|327319523|gb|AEA44015.1| GTPase obg [Fluviicola taffensis DSM 16823] Length = 330 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 141/322 (43%), Positives = 213/322 (66%), Gaps = 6/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K++ SG+GG G FRREK+I GGPDGG GGRGG ++++ L TL+ ++Q Sbjct: 6 FVDYVKIHCTSGNGGGGSAHFRREKYIPQGGPDGGDGGRGGHIYLRGNKQLWTLLHLKFQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA HGE G + + G++GED + VP+GT + + + ++ ++G+ IL PGG Sbjct: 66 KHMKAGHGEHGSGQLQKGSQGEDKYIEVPLGTIARDAETGEALFEITEDGEEKILVPGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSST Q P +A PG G+E + L++K++ADIG++G PNAGKST L+ ++ A Sbjct: 126 GGLGNDHFKSSTYQTPRFAQPGEPGRENWMVLEMKILADIGLVGKPNAGKSTLLSVLSSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+I DYPFTTL PNLGIVK Y+ F++ADIPGII+ AH+G G+G RFL+H ER LL Sbjct: 186 KPEIGDYPFTTLRPNLGIVKYRDYRSFVMADIPGIIEGAHEGKGLGLRFLRHIERNSCLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A +++ Y+ +L+EL YN EL K ++ +++ D +D + A +L Sbjct: 246 FMIPADADDIHEEYKLLLNELKQYNPELLHKERLLAITKSDMLDDELQAAISKDLP---- 301 Query: 302 QVPFEF-SSITGHGIPQILECL 322 ++P+ F SS+ G+ ++ + + Sbjct: 302 KIPYVFISSVAQQGLTELKDMI 323 >gi|317487387|ref|ZP_07946176.1| obg family GTPase CgtA [Bilophila wadsworthia 3_1_6] gi|316921364|gb|EFV42661.1| obg family GTPase CgtA [Bilophila wadsworthia 3_1_6] Length = 368 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 157/345 (45%), Positives = 231/345 (66%), Gaps = 18/345 (5%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + +++G GG G +SFRREKF+ GGPDGG GG GG + ++A S L +L DFR Sbjct: 1 MRFVDEAVISVKAGKGGNGCVSFRREKFVPRGGPDGGDGGDGGSIILRADSRLLSLYDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEE--DGISLICDLDQEGQRIILA 118 +H++AQ+G+ GM R G KGED+VL +PVGT VFE+ +G ++ DL + G ++ Sbjct: 61 IMRHYEAQNGQGGMGSQRYGRKGEDLVLNLPVGTLVFEQTPEGEHMLTDLAEAGDEYLVV 120 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GN HFKSST +AP +A PG G+E+ + L+LK++AD GIIGLPNAGKSTF++ Sbjct: 121 RGGRGGKGNEHFKSSTMRAPRFAQPGEPGEERNLRLELKILADAGIIGLPNAGKSTFISR 180 Query: 179 VTRAKPKIADYPFTTLYPNLGIVKEGY---KEFILADIPGIIKNAHQGAGIGDRFLKHTE 235 ++ A+PKIA YPFTTL PNLG+V + Y + ++ADIPG+I+ A +G G+G RFLKH E Sbjct: 181 ISAARPKIAAYPFTTLTPNLGVVIDEYDPDQRMVVADIPGLIEGASEGQGLGHRFLKHVE 240 Query: 236 RTHVLLHIVSA----LEENVQAAYQCILDELSAYNSE--LRKKIEIVGLSQIDTVDSDTL 289 RT L+HI+S EEN A + + DEL+A++ + LR++++++ + T + Sbjct: 241 RTRFLVHILSIEDVNPEENPWAGFDLVNDELNAFDEDLGLRRQLQVINKIDLRTPEEVDA 300 Query: 290 ARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 R +A + G+ F S+ G G+ ++L + +S+R E E Sbjct: 301 LRA---IAARDGREIFFMSADQGEGVEELLAAM----WSLRAEME 338 >gi|308051076|ref|YP_003914642.1| GTP-binding protein Obg/CgtA [Ferrimonas balearica DSM 9799] gi|307633266|gb|ADN77568.1| GTP-binding protein Obg/CgtA [Ferrimonas balearica DSM 9799] Length = 388 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 145/291 (49%), Positives = 200/291 (68%), Gaps = 4/291 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + + +GDGG+G +SFRREK+I GGPDGG GG GGDV++ A NLNTL+D+R Sbjct: 1 MKFVDEVTIRVEAGDGGSGVVSFRREKYIPKGGPDGGDGGDGGDVFLVADENLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ +A GE G N +G +G+D +L VPVGT+ + D +I DL Q Q++++A G Sbjct: 61 FERCHRAVRGENGRGGNCTGKRGDDRILKVPVGTRAVDADTGEVIGDLTQHNQKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKTLGTKGEHREVRLELMLLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V+ E K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPNLGVVRPEPSKSFVIADIPGLIEGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLHI+ E + + IL EL AY+ +L K + L+++D V + Sbjct: 241 LLHIIDMAPFDESDPAEGAKAILGELKAYSPKLFDKPRWLVLNKLDLVPEE 291 >gi|239904814|ref|YP_002951552.1| putative GTP-binding protein [Desulfovibrio magneticus RS-1] gi|239794677|dbj|BAH73666.1| putative GTP-binding protein [Desulfovibrio magneticus RS-1] Length = 398 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 157/373 (42%), Positives = 225/373 (60%), Gaps = 52/373 (13%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + +RSG GG G +SFRREKFI GGPDGG GG GGDV +A +L TL D R Sbjct: 1 MRFVDEAWIVVRSGKGGRGAVSFRREKFIPRGGPDGGDGGEGGDVVFRANPDLLTLYDLR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE---------------------- 98 ++ ++A++G+ GM R + G +D+ + VPVGTQ+FE Sbjct: 61 LRRIYEAKNGQGGMGRQKCGKAADDLYIDVPVGTQLFELPPLPAPDSFDDEPEEPVQTWV 120 Query: 99 ------------------------EDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSST 134 +D + + D+ + GQ I GG GG GN HF SST Sbjct: 121 PEQAMDIAVDDEADEAPAIESEAPDDEPTFLVDMTEPGQTFIACRGGRGGKGNLHFASST 180 Query: 135 NQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL 194 + P +A PG G+E+ I L LK++AD+GIIGLPNAGKSTF+A+V+RA+PKIA YPFTTL Sbjct: 181 MRTPRFAQPGEPGEERRIKLVLKVLADVGIIGLPNAGKSTFIAAVSRARPKIAPYPFTTL 240 Query: 195 YPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE---E 249 PNLG+++ + + +LADIPG+I+ AH G G+G RFL+H ERT VLLH+VSA + E Sbjct: 241 TPNLGVIEHDDACRRLVLADIPGLIEGAHLGQGLGHRFLRHVERTRVLLHVVSAEDASAE 300 Query: 250 NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSS 309 V A+ + +EL ++ L ++ +I +++ID + + LA ++ A G+ F S+ Sbjct: 301 GVFEAFGVVDEELRKFDPALAERPQIRVVNKIDLLTPEELA-ERKAAAKAAGEKLFFMSA 359 Query: 310 ITGHGIPQILECL 322 +TG G+ ++E L Sbjct: 360 LTGEGVEAVVEAL 372 >gi|309389480|gb|ADO77360.1| GTP-binding protein Obg/CgtA [Halanaerobium praevalens DSM 2228] Length = 423 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 147/329 (44%), Positives = 214/329 (65%), Gaps = 6/329 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + +++GDGG G +SFRREK+I+ GGPDGG GG GG + ++ +NTL D+RY Sbjct: 2 FIDEVEFKVKAGDGGNGVVSFRREKYIDQGGPDGGDGGDGGSIILKVNEGMNTLADYRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +KA GE G + G GED+ L VP GT +++ D + DL + G + ++A GG Sbjct: 62 NIYKADRGENGKGKKMHGKTGEDLYLDVPPGTMIYDADTDQFLADLTEAGDQYVIAAGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA FK ST +AP ++ G G+ + I L+LK++ADIG++G PN GKST ++ V+ A Sbjct: 122 GGRGNAKFKKSTRKAPRFSETGGTGELRKIRLELKVLADIGLVGYPNVGKSTLISQVSHA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTTL+PNLG+VK G YK F++ADIPGII+ AHQG G+GD FLKH ERT +L+ Sbjct: 182 KPKIDSYHFTTLHPNLGVVKYGDYKSFVMADIPGIIEGAHQGTGLGDEFLKHLERTRLLV 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQID-TVDSDTLARKKNELA 297 H+ VS +E + ++ I +EL+ YN L +++ L++ID V + K+EL Sbjct: 242 HVIDVSGIEGRDPLKDFETINNELNKYNDYLASLEQVIALNKIDLEVGRQNIETVKSEL- 300 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI 326 + G F S++TG G ++ L +++ Sbjct: 301 NEKGYSVFPISAVTGEGCKPLIYHLGERL 329 >gi|312131893|ref|YP_003999233.1| gtp-binding protein obg/cgta [Leadbetterella byssophila DSM 17132] gi|311908439|gb|ADQ18880.1| GTP-binding protein Obg/CgtA [Leadbetterella byssophila DSM 17132] Length = 332 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 149/322 (46%), Positives = 209/322 (64%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ ++SG+GG G FRREKF++ GGPDGG GGRGG + ++ TLI +YQ Sbjct: 5 FIDYVKINLKSGNGGRGFTHFRREKFVDKGGPDGGDGGRGGHIILRGNKQYWTLIHLKYQ 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA HGE G K +G +G+DV+L VP+GT + + ++ +GQ +I+ PGG Sbjct: 65 KHIKADHGESGGKSRSTGKQGKDVILEVPLGTVARNAETGEKLAEIIDDGQEVIVLPGGM 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+STNQAP Y+ PGI GQE L+LKL+AD+G++G PNAGKST L+ ++ A Sbjct: 125 GGLGNYHFKTSTNQAPDYSQPGIPGQEIWAILELKLLADVGLVGFPNAGKSTLLSVISAA 184 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+I DYPFTTL PNLG+V ++ F++ADIPGII+ A +G G+G RFL+H ER LL Sbjct: 185 KPEIGDYPFTTLVPNLGVVPYRDFQSFVMADIPGIIEGAAEGKGLGLRFLRHIERNSNLL 244 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V + + Y+ +L EL YN EL K ++ +++ D +D D KK AT Sbjct: 245 FMVDGSKLSPAEEYETLLGELEKYNPELLDKNRLLAVTKSDLLDEDL---KKEIAATLPK 301 Query: 302 QVPFEF-SSITGHGIPQILECL 322 +P F SS T GI ++ + + Sbjct: 302 GIPHVFISSKTMEGINELKDLI 323 >gi|255320761|ref|ZP_05361936.1| Obg family GTPase CgtA [Acinetobacter radioresistens SK82] gi|262379463|ref|ZP_06072619.1| obg family GTPase CgtA [Acinetobacter radioresistens SH164] gi|255302138|gb|EET81380.1| Obg family GTPase CgtA [Acinetobacter radioresistens SK82] gi|262298920|gb|EEY86833.1| obg family GTPase CgtA [Acinetobacter radioresistens SH164] Length = 402 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 155/334 (46%), Positives = 224/334 (67%), Gaps = 10/334 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + + +GDGG G SFRREKF+ FGGPDGG GGRGG ++IQA N +TL+D+R Sbjct: 1 MRFVDEAVITVEAGDGGNGVASFRREKFVPFGGPDGGDGGRGGSIYIQADDNTSTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+A+ G+ G N +G GEDVVL VPVGT V + + +I DL + GQR+++A G Sbjct: 61 YTRKFRAERGKNGAGANCTGRGGEDVVLYVPVGTTVVDTESGDIIGDLIESGQRVLVAGG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G+ G+ + I L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GEGGLGNTHFKSSTNRAPRKCTTGVKGEYREIRLELKVLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTT+ PNLG+V + ++ F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTMVPNLGVVDADRHRSFVMADIPGLIEGAAEGAGLGIRFLKHLARTRI 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV + V A + IL EL ++ L + ++ L+++D + D+ Sbjct: 241 LLHIVDVQPIDGSDPVHNA-KAILRELEKFSPTLAQLPVVLVLNKLDQLPEDSREEWCEH 299 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKI 326 + + G V F+ S + G ++ L D+I Sbjct: 300 ILNELNWDGPV-FKTSGLLSEGTKDVVYYLMDQI 332 >gi|293609806|ref|ZP_06692108.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828258|gb|EFF86621.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325123031|gb|ADY82554.1| GTP-binding protein [Acinetobacter calcoaceticus PHEA-2] Length = 406 Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 151/333 (45%), Positives = 225/333 (67%), Gaps = 8/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + + +GDGG G SFRREKF+ FGGPDGG GGRGG ++IQA + +TL+D+R Sbjct: 1 MRFVDEAVITVEAGDGGNGVASFRREKFVPFGGPDGGDGGRGGSIYIQADDDTSTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+A+ G+ G N +G GEDVVL VPVGT + + D +I DL ++GQRI++A G Sbjct: 61 YTRKFRAERGKNGAGANCTGRGGEDVVLKVPVGTTIVDTDSGDIIGDLVEDGQRILVAGG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ + I L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GEGGLGNTHFKSSTNRAPRKCTTGTKGEFREIRLELKVLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTT+ PNLG+V + ++ F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTMVPNLGVVDADRHRSFVMADIPGLIEGAAEGAGLGIRFLKHLARTRI 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHI+ + + I++EL+ ++ L K ++ L+++D + ++ + Sbjct: 241 LLHIIDVQPIDGSDPAHNAKAIMNELAKFSPTLAKLPVVLVLNKLDQIAEESREEWCQHI 300 Query: 297 ATQ---CGQVPFEFSSITGHGIPQILECLHDKI 326 + G V F+ S + G +++ L D+I Sbjct: 301 LDELEWTGPV-FKTSGLLSEGTKEVVYYLMDQI 332 >gi|88704335|ref|ZP_01102049.1| GTP-binding protein [Congregibacter litoralis KT71] gi|88701386|gb|EAQ98491.1| GTP-binding protein [Congregibacter litoralis KT71] Length = 394 Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 139/294 (47%), Positives = 201/294 (68%), Gaps = 4/294 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G +SFRREK++E GGPDGG GG GG V++ A +LNT++D+R Sbjct: 1 MKFVDEASIRVFAGKGGNGCLSFRREKYVERGGPDGGDGGDGGSVYLVADHSLNTMVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A++GEKG RN +GA G D+ L VPVGT V +ED + DL G R+++A G Sbjct: 61 FQRVYRAENGEKGRGRNCTGAGGADLELPVPVGTTVLDEDSGETLGDLVAPGDRLLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP +PG G+E+ + L+L ++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSVNRAPQQTSPGSEGEERSLKLELNVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P++ADYPFTTL P LG+VK + + F++ADIPG+I+ A GAG+G RFLKH R + Sbjct: 181 AARPRVADYPFTTLVPQLGVVKVDALRSFVVADIPGLIEGASDGAGLGIRFLKHLTRNRI 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLA 290 LLH+V + + I+ EL ++ L + + L++ D +D LA Sbjct: 241 LLHLVDVAPMDGSDPADSAASIVRELERFSPTLAARERWLVLNKTDLIDEQELA 294 >gi|262278216|ref|ZP_06056001.1| GTPase [Acinetobacter calcoaceticus RUH2202] gi|262258567|gb|EEY77300.1| GTPase [Acinetobacter calcoaceticus RUH2202] Length = 406 Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 151/333 (45%), Positives = 226/333 (67%), Gaps = 8/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + + +GDGG G SFRREKF+ FGGPDGG GGRGG ++IQA + +TL+D+R Sbjct: 1 MRFVDEAVITVEAGDGGNGVASFRREKFVPFGGPDGGDGGRGGSIYIQADDDTSTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+A+ G+ G N +G GEDVVL VPVGT + + D +I DL ++GQRI++A G Sbjct: 61 YTRKFRAERGKNGAGANCTGRGGEDVVLKVPVGTTIVDTDSGDIIGDLVEDGQRILVAGG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSSTN+AP GI G+ + I L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GDGGLGNTHFKSSTNRAPRKCTTGIKGEFREIRLELKVLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTT+ PNLG+V + ++ F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTMVPNLGVVDADRHRSFVMADIPGLIEGAAEGAGLGIRFLKHLARTRI 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHI+ + + I++EL ++ L K ++ L+++D + ++ + Sbjct: 241 LLHIIDVQPIDGSDPAHNAKAIMNELVKFSPTLAKLPVVLVLNKLDQIAEESREEWCQHI 300 Query: 297 ATQ---CGQVPFEFSSITGHGIPQILECLHDKI 326 + G V F+ S + G +++ L D++ Sbjct: 301 LDELEWTGPV-FKTSGLLSEGTKEVVYYLMDQL 332 >gi|296104896|ref|YP_003615042.1| putative GTPase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059355|gb|ADF64093.1| putative GTPase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 390 Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 206/290 (71%), Gaps = 6/290 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPRGGPDGGDGGDGGDVWLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN+ FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNSRFKSSVNRTPRQKTMGTPGDKRDLQLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D Sbjct: 241 LLHLIDIDPIDGSDPVENA-RIIVGELEKYSEKLANKPRWLVFNKIDLMD 289 >gi|157363259|ref|YP_001470026.1| GTPase ObgE [Thermotoga lettingae TMO] gi|261277719|sp|A8F478|OBG_THELT RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|157313863|gb|ABV32962.1| GTP-binding protein Obg/CgtA [Thermotoga lettingae TMO] Length = 433 Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 146/337 (43%), Positives = 220/337 (65%), Gaps = 8/337 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++++GDGG G +SFRREK++ GGPDGG GG GG V ++A L+TL++F+YQ Sbjct: 6 FVDRVTIFVKAGDGGNGAVSFRREKYVPKGGPDGGDGGDGGFVILRANPGLSTLLNFKYQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F AQ+G+ G + +SG GED+V+ VPVGT V + + ++ DLD+ + +A GG Sbjct: 66 RRFIAQNGQHGKGKKQSGKSGEDLVIDVPVGTIVKDANTGEVLADLDRSWMMVCVARGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +S +AP A G G+E+ + L+LKL+AD G+IG PN GKS+ +++++ A Sbjct: 126 GGRGNIHFATSVFRAPRIAEKGDKGEERWLELELKLLADAGLIGFPNVGKSSLISAMSNA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADYPFTTL PNLG+VK + EF+LADIPG+I+ A +GAG+G+ FL+H ER VL+ Sbjct: 186 RPKIADYPFTTLVPNLGVVKIDENSEFVLADIPGLIERASEGAGLGNLFLRHIERCSVLV 245 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+ +S E + Y I+ EL YN +L +K +I+ ++ID ++ D L ++ L Sbjct: 246 HVIDISGSEGRDFIKDYDVIVQELCKYNEQLSRKPQIIVANKIDLLEKDELEKRLETLEK 305 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 Q + S++ I + L KIF I G++ Sbjct: 306 HANQKIYPVSALLRINI----DILKQKIFEIVGKSRL 338 >gi|146313253|ref|YP_001178327.1| GTPase ObgE [Enterobacter sp. 638] gi|261266784|sp|A4WEZ6|OBG_ENT38 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|145320129|gb|ABP62276.1| small GTP-binding protein [Enterobacter sp. 638] Length = 392 Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 206/290 (71%), Gaps = 6/290 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPRGGPDGGDGGDGGDVWLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++ G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDVTVKVPVGTRVIDQGTGETLGDMTKHGQRLMVGKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN+ FKSS N++P G G ++ + L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GWHGLGNSRFKSSVNRSPRQKTMGTPGDKRDLQLELMLLADVGMLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D Sbjct: 241 LLHLIDIDPIDGSDPVENA-RIIVGELEKYSDKLAAKPRWLVFNKIDLMD 289 >gi|254516952|ref|ZP_05129010.1| GTP-binding protein Obg/CgtA [gamma proteobacterium NOR5-3] gi|219674457|gb|EED30825.1| GTP-binding protein Obg/CgtA [gamma proteobacterium NOR5-3] Length = 395 Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 141/326 (43%), Positives = 213/326 (65%), Gaps = 6/326 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G +SFRREKF+E GGPDGG GG GG V+++A +NT++D+R Sbjct: 1 MKFVDEASIRVFAGKGGNGCLSFRREKFVERGGPDGGDGGDGGSVYLRADQGMNTMVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ G+ G RN +GA G D+VL VPVGT V +ED ++ DL G R+++A G Sbjct: 61 FQRVYRAESGQSGRGRNCTGAGGSDLVLPVPVGTTVLDEDSGEVLGDLVAAGDRLLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP +PG G+++ + L+L ++AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSVNRAPQQTSPGSEGEQRALKLELNVLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P++ADYPFTTL P LG+VK + + F++ADIPG+I+ A GAG+G RFLKH R + Sbjct: 181 AARPRVADYPFTTLVPQLGVVKVDALRSFVVADIPGLIEGASDGAGLGIRFLKHLTRNRI 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLA--RKKN 294 LLH+V + + I EL ++ L + + L++ D +D ++L R + Sbjct: 241 LLHLVDVAPMDGSDPADSAVSIARELERFSPTLAARERWLVLNKTDLIDQESLTEIRARV 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQILE 320 A Q + S++ G ++ + Sbjct: 301 VEALQWSAPIYTISALAHDGTERLCQ 326 >gi|325280736|ref|YP_004253278.1| GTPase obg [Odoribacter splanchnicus DSM 20712] gi|324312545|gb|ADY33098.1| GTPase obg [Odoribacter splanchnicus DSM 20712] Length = 329 Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 147/323 (45%), Positives = 208/323 (64%), Gaps = 8/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K + RSG GG G R+K GGPDGG GGRGG+V ++ N TLI +YQ Sbjct: 6 FVDYVKTFCRSGAGGRGSAHLHRDKRTMKGGPDGGDGGRGGNVIVRGNRNYWTLIHLKYQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A G G + +GA GEDV + VP+GT + + IC++ Q+G+ IL GG Sbjct: 66 RHVFAGDGGNGSEDRSTGADGEDVTIEVPLGTVARDAETGETICEITQDGESFILVKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +F+S+TNQ P +A PG E+ + L+LK++AD+G++G PNAGKST L+ V+ A Sbjct: 126 GGLGNWNFRSATNQTPRFAQPGEPRVERTVILELKVLADVGLVGFPNAGKSTLLSVVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KP+IA+YPFTTL PNLGIV ++G + F++ADIPGII+ AHQG G+G RFL+H ER VL Sbjct: 186 KPEIANYPFTTLVPNLGIVNYRDG-RSFVMADIPGIIEGAHQGKGLGIRFLRHIERNSVL 244 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L +V A +N+ Y +L+EL YN EL K ++ +S+ D D + +A E+ Sbjct: 245 LFLVPADSQNIHQEYNILLNELKQYNPELLDKKRVLAISKSDCADKELMA----EMECDL 300 Query: 301 GQVPFEF-SSITGHGIPQILECL 322 +P+ F SS+TG G+ ++ + L Sbjct: 301 PDIPYVFISSVTGTGLTELKDIL 323 >gi|255306067|ref|ZP_05350239.1| Spo0B-associated GTP-binding protein [Clostridium difficile ATCC 43255] Length = 425 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 148/322 (45%), Positives = 219/322 (68%), Gaps = 6/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+A++++++G+GG G ++FRREK++ GGPDGG GGRG + + L TL+DF+YQ Sbjct: 2 FIDKARIFVKAGNGGNGSVAFRREKYVPAGGPDGGDGGRGASIIFEVDLGLRTLMDFKYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + ++AQ+G G K R+G GE++VL VP GT + +E ++ DL +EG I+A GG Sbjct: 62 KKYQAQNGGDGSKGKRAGKNGENLVLKVPAGTVIRDEATGLVLADLKKEGDTAIVAKGGI 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF ++ QAP +A G G+E+ I L+LK+IAD+G++G PN GKSTFL+ VT+A Sbjct: 122 GGKGNQHFANAVRQAPAFAKSGTDGEERWITLELKMIADVGLLGFPNVGKSTFLSVVTKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V+ + + F+LADIPGII+ A +G G+G FL+H ERT VL+ Sbjct: 182 KPKIANYHFTTLTPNLGVVQTKFGDSFVLADIPGIIEGASEGIGLGHEFLRHVERTKVLI 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK-KNELA 297 HIV S LE + + I DEL YN +L K+ ++V ++ D ++ ++ K K EL Sbjct: 242 HIVDISGLEGRDPIEDFDKINDELKLYNEKLSKRPQVVVANKFDILEDESKFEKFKIELE 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + G F+ S+ T GI +++ Sbjct: 302 GR-GYTVFKMSAATRQGIDEVI 322 >gi|291285977|ref|YP_003502793.1| GTP-binding protein Obg/CgtA [Denitrovibrio acetiphilus DSM 12809] gi|290883137|gb|ADD66837.1| GTP-binding protein Obg/CgtA [Denitrovibrio acetiphilus DSM 12809] Length = 341 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 149/337 (44%), Positives = 222/337 (65%), Gaps = 3/337 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D ++ +G GG G +SFRREKF+ GGPDGG+GG GG+V ++A S +TL+D R Sbjct: 1 MKFIDTCEIMAIAGKGGDGCMSFRREKFVPRGGPDGGNGGPGGNVILRADSTKHTLMDVR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y H KA+ G G ++ G G D V+ VP+GT V D ++ DL ++ II+A G Sbjct: 61 YIYHRKAERGIHGKGKDMHGRSGADAVVIVPIGTVVKNADTGEILADLTRQDAEIIVARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA+F S T++AP PG G+ + L+LKLIAD+GIIG PNAGKSTF++SV+ Sbjct: 121 GKGGRGNANFTSPTHRAPTRHEPGFEGETVKLALELKLIADVGIIGFPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG++K Y F+LAD+PG+I+ AH+G G+G +FL+H ERT + Sbjct: 181 AAKPKVADYPFTTLTPNLGVIKGVYGNAFVLADMPGLIEGAHEGVGLGIQFLRHIERTKL 240 Query: 240 LLHIVSAL-EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 LLH++ A EE++ Y+ + EL ++ ++ +K E++ +++D+V + L + L Sbjct: 241 LLHLIDASDEESMVERYKKLRYELDKFSHDVAEKPEVIAATKMDSVYQENLDEFEAYLKE 300 Query: 299 QCGQVP-FEFSSITGHGIPQILECLHDKIFSIRGENE 334 ++ F+ SSI G ++++ L D + + GE + Sbjct: 301 NHPEIAFFKISSIAKQGTDELIKHLDDSLSELFGEED 337 >gi|226311436|ref|YP_002771330.1| Spo0B-associated GTP-binding protein [Brevibacillus brevis NBRC 100599] gi|261266689|sp|C0ZAL7|OBG_BREBN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|226094384|dbj|BAH42826.1| Spo0B-associated GTP-binding protein [Brevibacillus brevis NBRC 100599] Length = 425 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 146/330 (44%), Positives = 219/330 (66%), Gaps = 5/330 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KVY++ GDGG G +SFRREK++ GGP GG GG+GGDV L TL+DFRYQ Sbjct: 2 FVDQVKVYVKGGDGGNGAVSFRREKYVPLGGPAGGDGGQGGDVVFVVDEGLRTLVDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE G +++ GA ED+V+ VP GT V ++D +I DL ++GQR ++A GG Sbjct: 62 RHFKAPRGEHGRNKSQHGAGAEDMVVRVPPGTTVIDDDTKEVIADLVEQGQRAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F +S+N AP+ + G GQE+ I ++LKLIAD+G++G P+ GKST L+SVT A Sbjct: 122 GGRGNNRFANSSNPAPHISENGEPGQERYIVMELKLIADVGLVGYPSVGKSTLLSSVTAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIA Y FTTL PNLG+V G + F++AD+PG+I+ AH+G G+G +FL+H ERT +++H Sbjct: 182 KPKIAAYHFTTLTPNLGVVDLGERSFVMADLPGLIEGAHEGVGLGHQFLRHVERTRLIVH 241 Query: 243 IVSALEENVQAAYQCILD---ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 ++ + + Y+ L EL+ YN +L + +IV ++++ +++ R E A Sbjct: 242 VIDMAAVDGRDPYEDYLQINRELTLYNLKLEDRPQIVVANKMELPEAEENLRIFKEKAPD 301 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSI 329 +E S+ T G+ +++ + D + +I Sbjct: 302 VKV--YEISAATSKGVQELMYAIGDTLATI 329 >gi|332828334|gb|EGK01043.1| hypothetical protein HMPREF9455_02565 [Dysgonomonas gadei ATCC BAA-286] Length = 406 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 149/322 (46%), Positives = 212/322 (65%), Gaps = 6/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G FRREK+I GGPDGG GG GG V ++ NL TL+ ++Q Sbjct: 27 FIDYVKIYCRSGKGGRGSTHFRREKYIPKGGPDGGDGGDGGHVILRGNRNLWTLLHLKFQ 86 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G R SG KGE ++ VP GT ++ + +CD+ ++GQ +I+ GG Sbjct: 87 RHILAGHGESGSGRLSSGKKGETKIIDVPCGTVAYDAETGEYLCDVTEDGQEVIMLRGGK 146 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+ TNQAP YA PG QE+ + L+LK++AD+G++G PNAGKST L+ +T A Sbjct: 147 GGRGNNHFKTPTNQAPRYAQPGEPYQERRVILELKVLADVGLVGFPNAGKSTLLSVMTAA 206 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTTL P +GIV YK F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 207 KPKIANYPFTTLEPKIGIVSYRDYKSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 266 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 I++A +++ Y+ +L+EL+ +N EL K ++ +S+ D +D + + L Sbjct: 267 FIIAADADDIHQEYRVLLNELAQFNPELLDKRRVLAISKSDMLDEELM----EALEADLP 322 Query: 302 QVPFEF-SSITGHGIPQILECL 322 ++P F SSITG+ + + + L Sbjct: 323 EIPHIFISSITGYNLVALKDLL 344 >gi|313205582|ref|YP_004044759.1| GTP-binding protein obg/cgta [Riemerella anatipestifer DSM 15868] gi|312444898|gb|ADQ81253.1| GTP-binding protein Obg/CgtA [Riemerella anatipestifer DSM 15868] gi|315022688|gb|EFT35713.1| GTP-binding protein [Riemerella anatipestifer RA-YM] gi|325334988|gb|ADZ11262.1| Predicted GTPase [Riemerella anatipestifer RA-GD] Length = 327 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 149/327 (45%), Positives = 214/327 (65%), Gaps = 8/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K++ +SG GGAG RREK+I GGPDGG GGRGG + ++ ++ TL+ RY Sbjct: 4 FVDYVKIHCKSGHGGAGSAHLRREKYIPKGGPDGGDGGRGGHIIMKGNAHEWTLLPLRYT 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G+ G K +G GEDV + VP+GT E+G +I ++ ++ Q IIL GG Sbjct: 64 RHVKAENGQPGGKNQLTGRYGEDVYIEVPIGTIAKNEEG-EIIGEILEDRQEIILMQGGK 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKS+TNQ P YA PG+ G+E I +LK++AD+G++G PNAGKST L++V+ A Sbjct: 123 GGLGNEHFKSATNQTPRYAQPGLPGEEGYIVFELKVLADVGLVGFPNAGKSTLLSAVSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLGIV YK F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 183 KPKIADYAFTTLTPNLGIVDYRNYKSFVMADIPGIIEGAAEGKGLGHRFLRHIERNSILL 242 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC- 300 ++ A E+ ++ + +EL YN EL K I+ +S+ D +D + K E+A + Sbjct: 243 FLIPADAEDYFQEFKILENELKEYNPELLDKDFIISISKSDLLDEEL----KKEVAAKFP 298 Query: 301 -GQVPFEFSSITGHGIPQILECLHDKI 326 + P S +TG G+ ++ + + K+ Sbjct: 299 ENRQPLFISGVTGEGLTELKDAIWKKL 325 >gi|288933389|ref|YP_003437448.1| GTP-binding protein Obg/CgtA [Klebsiella variicola At-22] gi|290511560|ref|ZP_06550929.1| obg family GTPase CgtA [Klebsiella sp. 1_1_55] gi|288888118|gb|ADC56436.1| GTP-binding protein Obg/CgtA [Klebsiella variicola At-22] gi|289776553|gb|EFD84552.1| obg family GTPase CgtA [Klebsiella sp. 1_1_55] Length = 392 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 205/290 (70%), Gaps = 6/290 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDVTVKVPVGTRVIDQGTGETMGDMTKHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTMGTPGDKRDLQLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D Sbjct: 241 LLHLIDIEPIDGSDPVENA-RIIIGELEKYSEKLASKPRWLVFNKIDLMD 289 >gi|197116564|ref|YP_002136991.1| GTPase ObgE [Geobacter bemidjiensis Bem] gi|261266799|sp|B5E958|OBG_GEOBB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|197085924|gb|ACH37195.1| ribosome biogenesis GTPase ObgE [Geobacter bemidjiensis Bem] Length = 338 Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 149/338 (44%), Positives = 225/338 (66%), Gaps = 7/338 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+ ++SGDGGAG +SFRREKFI GGPDGG GG+GGDV ++ +S+L+TL+D R Sbjct: 1 MSFIDEVKINVKSGDGGAGCVSFRREKFIPLGGPDGGDGGKGGDVIVKVSSHLSTLLDLR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 H KA G+ GM +R GA G + + VP GT + + + ++ DL + ++L G Sbjct: 61 QHPHQKAGRGKNGMGSDRHGANGHTLEILVPQGTVIKDAETGEILADLAEPDSSMVLLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FK++T++AP +A PG G+E+ I ++LKL+AD+G++G+P+ GKS+ +A ++ Sbjct: 121 GRGGQGNARFKTATHKAPKFAQPGEPGEERWIRMELKLMADVGLLGMPSVGKSSLIAKIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+Y FTTL P+LG+V+ + Y+ F++ADIPG+I+ A +GAG+G RFLKH ERT Sbjct: 181 AARPKIAEYHFTTLKPSLGVVQYKNYRSFVMADIPGLIEGASEGAGLGHRFLKHLERTGQ 240 Query: 240 LLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ + + A Y+ I EL+ +N EL K + V +++ID ++ Sbjct: 241 LLHLLDLSWMPDRDPIAEYEAINRELALFNPELADKRQTVVVNKIDLPHVRENLKEILPY 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + G F S+ TG GIP++L+ D F++ GE E Sbjct: 301 FEERGIKVFPISAATGEGIPELLD---DIAFNLWGEPE 335 >gi|85058344|ref|YP_454046.1| GTPase ObgE [Sodalis glossinidius str. 'morsitans'] gi|123520137|sp|Q2NW34|OBG_SODGM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|84778864|dbj|BAE73641.1| putative GTP-binding protein [Sodalis glossinidius str. 'morsitans'] Length = 385 Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 141/305 (46%), Positives = 206/305 (67%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +GDGG G +SFRREK+I GGPDGG GG GGDVW+ A NLNTLID+R Sbjct: 1 MKFVDEATILAAAGDGGNGCVSFRREKYIPRGGPDGGDGGDGGDVWLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++++F+A+ G+ G + +G +G+D+++ VPVGT+V + ++ D+ + QR+++A G Sbjct: 61 FEKNFRAERGQNGQSCDCTGKRGKDIIIKVPVGTRVLDSGTNEVMGDMTRHAQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + I L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKTGGTKGEIREIQLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEQSFVVADIPGLIEGAADGAGLGIRFLKHLERCQV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ E + + I+ EL Y+ L K + ++ D +D + A + N + Sbjct: 241 LLHLIDLAPVDESDPVENARIIVTELERYSENLASKPRWLVFNKADLLDPEEAASRANAI 300 Query: 297 ATQCG 301 A G Sbjct: 301 AKVLG 305 >gi|253698801|ref|YP_003019990.1| GTPase ObgE [Geobacter sp. M21] gi|251773651|gb|ACT16232.1| GTP-binding protein Obg/CgtA [Geobacter sp. M21] Length = 338 Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 149/338 (44%), Positives = 225/338 (66%), Gaps = 7/338 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K+ ++SGDGG+G +SFRREKFI GGPDGG GG+GGDV ++ +S+L+TL+D R Sbjct: 1 MSFIDEVKINVKSGDGGSGCVSFRREKFIPLGGPDGGDGGKGGDVIVKVSSHLSTLLDLR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 H KA G+ GM +R GA G + + VP GT + + + ++ DL I+L G Sbjct: 61 QHPHQKAGRGKNGMGSDRHGANGNTLEILVPQGTVIKDAETGEILADLTDPDSSIVLLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FK++T++AP +A PG G+E+ I ++LKL+AD+G++G+P+ GKS+ +A ++ Sbjct: 121 GRGGQGNARFKTATHKAPKFAQPGEPGEERWIRMELKLMADVGLLGMPSVGKSSLIAKIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+Y FTTL P+LG+V+ + Y+ F++ADIPG+I+ A +GAG+G RFLKH ERT Sbjct: 181 AARPKIAEYHFTTLKPSLGVVQYKNYRSFVMADIPGLIEGASEGAGLGHRFLKHLERTGQ 240 Query: 240 LLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ + + A Y+ I EL+ +N EL +K + V +++ID ++ Sbjct: 241 LLHLLDLSFMPDRDPIAEYEAINRELALFNPELAEKRQTVVINKIDLPHVRENLKEVLPY 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + G F S+ TG GIP++L+ D F++ GE E Sbjct: 301 FEERGIKVFPISAATGEGIPELLD---DIAFNLWGEPE 335 >gi|311277843|ref|YP_003940074.1| GTP-binding protein Obg/CgtA [Enterobacter cloacae SCF1] gi|308747038|gb|ADO46790.1| GTP-binding protein Obg/CgtA [Enterobacter cloacae SCF1] Length = 390 Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 205/290 (70%), Gaps = 6/290 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDVTVKVPVGTRVIDQGTGETMGDMTKHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTMGTPGDKRDLQLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D Sbjct: 241 LLHLIDIDPIDGSDPVENA-RIIIGELEKYSDKLAAKPRWLVFNKIDLMD 289 >gi|206576294|ref|YP_002236405.1| GTP-binding protein Obg/CgtA [Klebsiella pneumoniae 342] gi|261266838|sp|B5XSV8|OBG_KLEP3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|206565352|gb|ACI07128.1| GTP-binding protein Obg/CgtA [Klebsiella pneumoniae 342] Length = 392 Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 205/290 (70%), Gaps = 6/290 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDVTVKVPVGTRVIDQGTGETMGDMTKHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTMGTPGDKRDLQLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D Sbjct: 241 LLHLIDIEPIDGSDPVENA-RIIVGELEKYSEKLASKPRWLVFNKIDLMD 289 >gi|322831201|ref|YP_004211228.1| GTP-binding protein Obg/CgtA [Rahnella sp. Y9602] gi|321166402|gb|ADW72101.1| GTP-binding protein Obg/CgtA [Rahnella sp. Y9602] Length = 390 Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 139/305 (45%), Positives = 209/305 (68%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLIDFR Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPRGGPDGGDGGDGGDVYLVADENLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A+ G G + +G +G+D+ + VPVGT+V ++ ++ D+ + GQ ++A G Sbjct: 61 FVKSYRAERGTNGQSSDCTGKRGKDITIKVPVGTRVLDQSTGEVLADMTKNGQVNMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N++P G G+E+ I L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSVNRSPRQKTMGTKGEERDIALELMLLADVGMLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ +++ F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDHEQSFVVADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ E + + I++EL YN++L +K + +++D ++ + + + Sbjct: 241 LLHLIDIAPIDESDPIENAKVIINELKQYNAKLAEKPRWLVFNKVDLIEKEEAETRAKAI 300 Query: 297 ATQCG 301 A G Sbjct: 301 ADALG 305 >gi|238896690|ref|YP_002921435.1| GTPase ObgE [Klebsiella pneumoniae NTUH-K2044] gi|238549017|dbj|BAH65368.1| putative GTP-binding factor [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 392 Score = 255 bits (652), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 205/290 (70%), Gaps = 6/290 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDVTVKVPVGTRVIDQGTGETMGDMTKHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTMGTPGDKRDLQLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D Sbjct: 241 LLHLIDIDPIDGSDPVENA-RIIIGELEKYSEKLASKPRWLVFNKIDLMD 289 >gi|210623765|ref|ZP_03294025.1| hypothetical protein CLOHIR_01976 [Clostridium hiranonis DSM 13275] gi|210153347|gb|EEA84353.1| hypothetical protein CLOHIR_01976 [Clostridium hiranonis DSM 13275] Length = 427 Score = 255 bits (652), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 145/325 (44%), Positives = 221/325 (68%), Gaps = 6/325 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+A++++++G+GG G +SFRREK++ GGPDGG GGRG + + + L TL+DF+Y+ Sbjct: 2 FIDKARIFVKAGNGGNGAVSFRREKYVPAGGPDGGDGGRGASIIFEVDTGLRTLMDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + ++G G K+ R+G GED+VL VP GT V +E +I DL EG R ++A GG Sbjct: 62 KKYNGENGGDGSKKRRAGKNGEDLVLKVPQGTIVRDEATGLVIADLKHEGDRAVIAKGGY 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +F ++ QAP +A G G+E+ + L+LK+IAD+G++G PN GKSTFL+ VT+A Sbjct: 122 GGKGNMNFANAVRQAPAFAKSGTDGEERWVILELKMIADVGLLGFPNVGKSTFLSVVTKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V+ G+ E F+LADIPGII+ A +G G+G FL+H ERT VL+ Sbjct: 182 KPKIANYHFTTLTPNLGVVQTGFGESFVLADIPGIIEGASEGIGLGHEFLRHVERTKVLI 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK-KNELA 297 HIV S LE + ++ I +EL YN L + ++V ++ D + D++ K E+ Sbjct: 242 HIVDISGLEGRDPIDDFEKINEELKLYNERLATRPQVVVANKADILFDDSIYENFKAEIE 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECL 322 ++ +V F+ S+ T G+ +++ + Sbjct: 302 SRGYKV-FKMSAATRDGVDDVIKYV 325 >gi|152972107|ref|YP_001337253.1| GTPase ObgE [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|262042742|ref|ZP_06015896.1| Spo0B-associated GTP-binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|329997679|ref|ZP_08302898.1| Obg family GTPase CgtA [Klebsiella sp. MS 92-3] gi|261266839|sp|A6TEK2|OBG_KLEP7 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|150956956|gb|ABR78986.1| putative GTP-binding factor [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|259039967|gb|EEW41084.1| Spo0B-associated GTP-binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328538931|gb|EGF64987.1| Obg family GTPase CgtA [Klebsiella sp. MS 92-3] Length = 392 Score = 255 bits (652), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 205/290 (70%), Gaps = 6/290 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDVTVKVPVGTRVIDQGTGETMGDMTKHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTMGTPGDKRDLQLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D Sbjct: 241 LLHLIDIDPIDGSDPVENA-RIIIGELEKYSEKLASKPRWLVFNKIDLMD 289 >gi|325954284|ref|YP_004237944.1| GTPase obg [Weeksella virosa DSM 16922] gi|323436902|gb|ADX67366.1| GTPase obg [Weeksella virosa DSM 16922] Length = 329 Score = 255 bits (652), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 147/326 (45%), Positives = 212/326 (65%), Gaps = 6/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K++ SG GGAG REK+I+ GGPDGG GGRGG + +Q NL TL+++++Q Sbjct: 5 FVDYVKIHCTSGHGGAGSAHLHREKYIDKGGPDGGDGGRGGHIILQGNRNLWTLLEYKFQ 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HF+A+ G G +G G+D+ L VP+GT +E G ++I ++ ++ Q+IIL GG Sbjct: 65 KHFRAERGGNGGASRSTGKDGKDIYLEVPIGTIAKDEQG-NVIGEITEDQQQIILMRGGK 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+S+T Q P YA PG+ GQE I L+LK++AD+G++G PNAGKST L+ +T A Sbjct: 124 GGLGNWHFRSATRQTPRYAQPGLEGQEGWITLELKVLADVGLVGFPNAGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI DY FTTL PNLGIV ++ FI+ADIPGII+ A +G G+G RFL+H ER LL Sbjct: 184 KPKIGDYAFTTLTPNLGIVNYRDHQSFIMADIPGIIEGAAEGKGLGHRFLRHIERNSTLL 243 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A ++ Q Y +++EL YN EL K ++ +S+ D +D + A+ K +L Sbjct: 244 FLIPADADDYQKEYDILVNELKKYNPELLDKSRVLAISKSDMLDDELKAQIKKQLPIDIE 303 Query: 302 QVPFEFSSITGH-GIPQILECLHDKI 326 V F S H G+ ++ + L K+ Sbjct: 304 TV---FISAVAHLGLTELKDLLWKKL 326 >gi|254373613|ref|ZP_04989099.1| GTP-binding protein [Francisella tularensis subsp. novicida GA99-3549] gi|151571337|gb|EDN36991.1| GTP-binding protein [Francisella novicida GA99-3549] Length = 334 Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 143/304 (47%), Positives = 199/304 (65%), Gaps = 4/304 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE + +++G GG G +SFRREK++ GGPDGG GG GG ++++A N+NTLID+R Sbjct: 1 MRFVDEVVIKLQAGKGGNGCVSFRREKYVPRGGPDGGDGGNGGSIYLKADENVNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ + A++G G RN G GED+ L VPVGT VF+ D I ++ Q GQ L G Sbjct: 61 YKREYYAENGRPGEGRNCYGKAGEDLYLVVPVGTSVFDIDSNKKIGEVLQHGQTFKLVSG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN HFKSSTNQAP G G+ K + L+L L+AD+ ++GLPNAGKST + SV+ Sbjct: 121 GKRGIGNTHFKSSTNQAPRKFTLGEEGEYKEVRLELNLLADVALLGLPNAGKSTLIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PK+ADYPFTT+YP+LG+VK G F++ADIPG+I+ A +GAG+G RFLKH R + Sbjct: 181 EATPKVADYPFTTMYPHLGVVKVGVDSFVMADIPGVIEGAAEGAGLGLRFLKHLTRARCV 240 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH+V E + Y + EL Y+ EL K + +++ID + +D + +K E Sbjct: 241 LHVVDICPFNESDPVENYFAVEKELEKYSQELFDKPRFLVINKIDLL-ADKVEQKCQEFV 299 Query: 298 TQCG 301 Q G Sbjct: 300 EQIG 303 >gi|121998625|ref|YP_001003412.1| GTP1/OBG domain-containing protein [Halorhodospira halophila SL1] gi|261266827|sp|A1WY48|OBG_HALHL RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|121590030|gb|ABM62610.1| GTP1/OBG sub domain protein [Halorhodospira halophila SL1] Length = 346 Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 147/342 (42%), Positives = 226/342 (66%), Gaps = 8/342 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE +R+GDGG G + FRREK++ GGPDGG GGRGG V+++ LNTL+D+R Sbjct: 1 MRFVDEVTFVVRAGDGGDGCVHFRREKYVPRGGPDGGDGGRGGSVYLEGDEGLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A+ GE G R +G G D +L VPVGT V +E +I D+ ++G+R+++A G Sbjct: 61 HDRFFSAESGEAGGGRQCTGRSGVDRILPVPVGTLVMDEGTGEVIGDVTRDGERLLVAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP + G G+ + + L+L+L+AD+G++G+PN GKST + +++ Sbjct: 121 GRGGLGNLHFKSSTNRAPRQSTEGTAGESRELRLELQLLADVGLLGMPNVGKSTLIRTIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTLYP LG+V+ E + F++ADIPGII+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKVADYPFTTLYPQLGVVRYEAQRSFVVADIPGIIEGAAEGAGLGVRFLKHLSRTGL 240 Query: 240 LLHIVSALEENVQ-----AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 LLH+V + E + A Q +L EL A++ EL +K + ++++D + + A + Sbjct: 241 LLHLVDGVAEEERGGDPVADAQTLLAELEAFSPELAQKPRWLVVNRLDALPEEMRAERVA 300 Query: 295 ELATQCGQ--VPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 E+A G + S +TG G+ ++ + + + + R E + Sbjct: 301 EIARGLGWDGPVYGISGLTGEGVDRLCGDIMNDLEARRREED 342 >gi|332994561|gb|AEF04616.1| GTPase CgtA [Alteromonas sp. SN2] Length = 398 Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 141/305 (46%), Positives = 208/305 (68%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G I FRREK++ GGPDGG GG GG V++ A NLNTLID+R Sbjct: 1 MKFVDEAEIRVEAGDGGNGVIGFRREKYVPKGGPDGGDGGDGGSVFLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ +A+ G+ G N G G+D+ ++VPVGT+ + D ++ DL + GQ++ +A G Sbjct: 61 FERFHRAERGQNGQGANCIGRGGKDLTVSVPVGTRATDSDTGEVLGDLTRHGQQLKVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSSTN+AP + G G+ + + L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNARFKSSTNRAPRHKTNGTPGEIRNLKLELMLLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V++ + F++ADIPG+I+ A GAG+G RFLKH ER + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVRQDAQRSFVVADIPGLIEGAADGAGLGIRFLKHLERCRI 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V + E + + I++EL YN +L K + +++D + + + E+ Sbjct: 241 LLHVVDIMPVDESDPAENAKAIVEELEKYNPKLASKPRWLVFNKVDLMLEEEANERCKEI 300 Query: 297 ATQCG 301 A Q G Sbjct: 301 AAQIG 305 >gi|77920174|ref|YP_357989.1| GTPase ObgE [Pelobacter carbinolicus DSM 2380] gi|123573472|sp|Q3A1D8|OBG_PELCD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|77546257|gb|ABA89819.1| GTP-binding protein, GTP1/OBG family [Pelobacter carbinolicus DSM 2380] Length = 356 Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 151/336 (44%), Positives = 228/336 (67%), Gaps = 6/336 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D K+++++GDGG G +SFRREKFI GGPDGG GGRGG++ ++ L TL+D R Sbjct: 1 MKFIDRVKIHVKAGDGGRGCLSFRREKFIPKGGPDGGDGGRGGNIVLRVDEGLGTLLDLR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ H+KAQ G GM +N G GED+ + VP G V++ + L+ DL + +++ G Sbjct: 61 YQIHYKAQRGAHGMGKNCHGKNGEDLEIRVPPGVLVYDAETDELLADLTEGCHELVVVRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F +STN+AP + PG+ G+E+ + L+LKL+AD+G++G+PNAGKST +++V+ Sbjct: 121 GMGGRGNARFATSTNRAPRHVQPGVEGEERWLRLELKLLADVGLLGMPNAGKSTLISAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ G+K F++ADIPG+I+ A +G G+G RFL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRCGGFKTFVMADIPGLIEGASEGHGLGTRFLRHVERTDL 240 Query: 240 LLHIV--SALEE-NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNE 295 LH+V S L+E + + I EL+ +N EL +K ++V LS+ID + + L + Sbjct: 241 FLHLVDLSDLQEGDPMERFALINRELARHNPELMEKPQLVVLSKIDVSEVRERLDAVRAA 300 Query: 296 LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 A + G S++TG G+ +++ + ++ +R Sbjct: 301 FAAE-GIRTLAISAVTGEGLKELVAEVARELEKLRA 335 >gi|83648581|ref|YP_437016.1| GTPase ObgE [Hahella chejuensis KCTC 2396] gi|123530796|sp|Q2S9T3|OBG_HAHCH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|83636624|gb|ABC32591.1| predicted GTPase [Hahella chejuensis KCTC 2396] Length = 396 Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 150/334 (44%), Positives = 219/334 (65%), Gaps = 22/334 (6%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA +Y+ +G GG G +SFRREK++ GGPDGG GG GG V ++A ++NTLID+R Sbjct: 1 MKFVDEATIYVEAGKGGNGCLSFRREKYVPKGGPDGGDGGDGGSVILEADESINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + FKA +GE G N +GA G D+VL VPVGT + + D ++ DL + GQ+I +A G Sbjct: 61 YTRKFKAANGESGRGGNCTGASGADLVLKVPVGTTIIDTDIDEVLGDLVEVGQQIKVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN +KSS NQAP PG G+ + I L+LK++AD+G++GLPNAGKST + ++ Sbjct: 121 GFHGLGNTRYKSSVNQAPRQTKPGQPGESRNIRLELKVLADVGLLGLPNAGKSTLIRGIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V+ + ++ F++ADIPG+I+ A GAG+G RFLKH RT + Sbjct: 181 SAKPKVADYPFTTLVPNLGVVRVQAHRSFVVADIPGLIEGAADGAGLGIRFLKHLVRTRL 240 Query: 240 LLHI--VSALEEN--VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+ VS L+E+ V++A + I+ EL ++ L + + L++ D + D E Sbjct: 241 LLHVVDVSPLDESDPVESAVK-IVAELEKFSPALAARDRWLVLNKTDLLAED-------E 292 Query: 296 LATQCGQV---------PFEFSSITGHGIPQILE 320 C + +E S++ G G+ ++ + Sbjct: 293 KEAICADILKRLNWSGPSYEISALAGEGLQRLCQ 326 >gi|289548447|ref|YP_003473435.1| GTP-binding protein Obg/CgtA [Thermocrinis albus DSM 14484] gi|289182064|gb|ADC89308.1| GTP-binding protein Obg/CgtA [Thermocrinis albus DSM 14484] Length = 337 Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 155/330 (46%), Positives = 223/330 (67%), Gaps = 16/330 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K++++ G GG G ++F REK+ FGGP GG GG GG V + TS +TL+DF+Y+ Sbjct: 2 FVDRVKIWVKGGRGGDGAVAFLREKYRPFGGPAGGDGGNGGSVILVGTSRKHTLLDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE G +N+ G GED+VL VP+GT V + +ICD+ +EGQR ++A GG Sbjct: 62 KHFKAKDGEHGKGKNQHGKDGEDLVLEVPLGTVVKDALTGEVICDIVEEGQRCVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F + T+QAP YA G G+E+ I L+LKLIAD+G++GLPNAGKST ++ +TRA Sbjct: 122 GGRGNARFATPTHQAPRYAEKGQEGEERWIILELKLIADVGLVGLPNAGKSTLISKLTRA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADYPFTTL P LG+++ + + +LADIPG+I+ A QG G+G FL+H ERT +LL Sbjct: 182 RPKIADYPFTTLSPVLGVLEIDEERRLVLADIPGLIEGASQGRGLGHEFLRHIERTRILL 241 Query: 242 HIVS----ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS----DTLARKK 293 H+V A + V+ A++ + EL Y+ EL KK +IV +++D + DTL R Sbjct: 242 HLVDISDGASMDPVE-AFRIVNKELGEYSEELLKKPQIVVGTKLDALSDRTKLDTLKRTF 300 Query: 294 NELATQCGQVPF-EFSSITGHGIPQILECL 322 ++ PF S++TG G+ Q+++ L Sbjct: 301 EDMG-----YPFLAVSAVTGEGLDQLVDTL 325 >gi|291278696|ref|YP_003495531.1| GTP-binding protein Obg [Deferribacter desulfuricans SSM1] gi|290753398|dbj|BAI79775.1| GTP-binding protein Obg [Deferribacter desulfuricans SSM1] Length = 338 Score = 255 bits (651), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 155/334 (46%), Positives = 232/334 (69%), Gaps = 6/334 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D AK+++++GDGG G +SFRREKF+ GGPDGG+GG GGDV++ +TL+D Sbjct: 1 MKFIDVAKIHVKAGDGGRGCVSFRREKFVPRGGPDGGNGGDGGDVYLVGDEGKSTLLDVT 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ +KA+ GE G +++ G KG+DV + VPVGT V + + +I D+ + GQ++++A G Sbjct: 61 FKAIYKAKRGEHGRGKDQHGKKGDDVFIKVPVGTVVKDYENGEIIADITEHGQKVLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F S T +AP YA G G+EKI+ L+LKLIAD+GI+G PNAGKSTF++ V+ Sbjct: 121 GKGGRGNMMFVSPTQRAPRYAEDGEPGEEKILLLELKLIADVGIVGYPNAGKSTFISVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTT+ PNLG+VK Y E F++AD+PG+I+ AH+G G+G +FL+H ERT + Sbjct: 181 AARPKIADYPFTTITPNLGVVKGEYGESFVIADMPGLIEGAHKGVGLGTQFLRHIERTRL 240 Query: 240 LLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LLH V S E + Y+ I +EL Y+ EL KK EI+ +++D + + L + + Sbjct: 241 LLHFVDSSDFETPMDIRYEKIREELEKYSDELSKKKEIIVATKVDAANEEFLDNFRKYI- 299 Query: 298 TQCGQVP--FEFSSITGHGIPQILECLHDKIFSI 329 Q G+ +E S++T +G+ ++L+ + +I S+ Sbjct: 300 EQIGKKNDYYEVSALTKNGVKELLKRVEKEIISL 333 >gi|167037839|ref|YP_001665417.1| GTPase ObgE [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167040736|ref|YP_001663721.1| GTPase ObgE [Thermoanaerobacter sp. X514] gi|300914774|ref|ZP_07132090.1| GTP-binding protein Obg/CgtA [Thermoanaerobacter sp. X561] gi|307723992|ref|YP_003903743.1| GTP-binding protein Obg/CgtA [Thermoanaerobacter sp. X513] gi|320116256|ref|YP_004186415.1| GTP-binding protein Obg/CgtA [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|261277723|sp|B0KAB8|OBG_THEP3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277724|sp|B0K414|OBG_THEPX RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|166854976|gb|ABY93385.1| small GTP-binding protein [Thermoanaerobacter sp. X514] gi|166856673|gb|ABY95081.1| small GTP-binding protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|300889709|gb|EFK84855.1| GTP-binding protein Obg/CgtA [Thermoanaerobacter sp. X561] gi|307581053|gb|ADN54452.1| GTP-binding protein Obg/CgtA [Thermoanaerobacter sp. X513] gi|319929347|gb|ADV80032.1| GTP-binding protein Obg/CgtA [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 423 Score = 255 bits (651), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 152/331 (45%), Positives = 222/331 (67%), Gaps = 5/331 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A++YI++GDGG G ISFRREK++ +GGPDGG GG+GGDV A NL+TL+DF+Y+ Sbjct: 2 FIDTARIYIKAGDGGNGIISFRREKYVAYGGPDGGDGGKGGDVIFIADPNLSTLLDFKYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + AQ+GE G +N+ G GED+ + VPVGT + ++ +I DL + Q+ I+ GG Sbjct: 62 KKYIAQNGENGRGKNQYGKNGEDLYIKVPVGTLIINDETGEIIADLVKPNQKAIVLRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F + T + P +A G G+E + L+LKL+AD+G+IG PNAGKST LAS TRA Sbjct: 122 GGRGNAKFATPTLKTPRFAESGEKGKEMWVRLELKLLADVGLIGFPNAGKSTLLASCTRA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIA+YPFTTL PNLG+V+ K F++ADIPG+I+ AH+G G+G FL+H ERT +L+H Sbjct: 182 KPKIANYPFTTLTPNLGVVEHKGKSFVMADIPGLIEGAHRGEGLGHDFLRHIERTKMLIH 241 Query: 243 I--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELAT 298 + VSA E + ++ I +EL Y+ L +IV ++ID + + E+ Sbjct: 242 VVDVSASEGRDPIEDFEKINEELKLYSERLLTLSQIVAANKIDIQSGKENFPAFEKEIKK 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 + +V + S++T GI ++L+ + + SI Sbjct: 302 RGYEV-YPISALTKVGIDKLLDKTIEILSSI 331 >gi|319897635|ref|YP_004135832.1| gtpase involved in cell partioning and DNA repair [Haemophilus influenzae F3031] gi|317433141|emb|CBY81515.1| GTPase involved in cell partioning and DNA repair [Haemophilus influenzae F3031] Length = 382 Score = 255 bits (651), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 153/340 (45%), Positives = 219/340 (64%), Gaps = 6/340 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE+ + I +GDGG G +SFRREKFI GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFIDESLIRIEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A+ GE G + +G +G+D++L VPVGT+ + D + DL + GQ++++A G Sbjct: 61 FNKRFAAERGENGRSSDCTGRRGKDIILPVPVGTRAIDNDTKETLGDLTEHGQKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLLLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDDSHSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V N I EL Y+ +L +K + ++IDT+ + + E+ Sbjct: 241 LIHLVDIAPIDGSNPADNVAIIESELFQYSEKLSEKPRWLVFNKIDTMSDEEAEERVREI 300 Query: 297 ATQCG--QVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 Q G + + S+ TG +P + + D I + E E Sbjct: 301 TEQLGWEEDYYLISAATGKNVPPLCRDIMDFIIANPREAE 340 >gi|302389335|ref|YP_003825156.1| GTP-binding protein Obg/CgtA [Thermosediminibacter oceani DSM 16646] gi|302199963|gb|ADL07533.1| GTP-binding protein Obg/CgtA [Thermosediminibacter oceani DSM 16646] Length = 422 Score = 255 bits (651), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 160/353 (45%), Positives = 231/353 (65%), Gaps = 21/353 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+Y+++GDGG G ++FRREK++ GGP GG GG+GGDV + SNL+TL DF+Y+ Sbjct: 2 FVDRAKIYVKAGDGGNGVVAFRREKYVPRGGPSGGDGGKGGDVVLMVDSNLSTLQDFKYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H+KAQ G+ G N+ G GED+V+ VP GT V + + ++ DL + GQ I A GG Sbjct: 62 AHYKAQRGQNGQGSNKIGKSGEDLVIKVPPGTVVKDAETGEILADLVKPGQTFIAARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F S NQAP +A G G+E+ I L+LKL+AD+G+IG PNAGKST L+ +T A Sbjct: 122 GGRGNARFVSPVNQAPDFAEKGEPGEERWILLELKLLADVGLIGFPNAGKSTLLSRMTAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY--KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PKIADYPFTTL PNLG+V G + F++ADIPG+I+ AH+G G+G FL+H ERT VL Sbjct: 182 RPKIADYPFTTLTPNLGVVDMGPTGRSFVVADIPGLIEGAHEGLGLGHEFLRHVERTRVL 241 Query: 241 LHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 +HI+ A LE + + I EL+A++ +L +K +IV +++D + + L R K++L Sbjct: 242 VHIIDAAGLENDPVEGFYIINRELAAFSEKLAQKPQIVAANKMDLPQARENLDRIKSQLE 301 Query: 298 TQCGQVPFEFSSITGHGIPQI---------------LECLHDKIFSIRGENEF 335 + +V S+ TG G+ ++ LE + K ++I+ E+E Sbjct: 302 PRGYEV-VPISAATGEGVKELIYKIIQYLDKVGDAALETVEVKKYTIKEEDEI 353 >gi|107021661|ref|YP_619988.1| GTPase ObgE [Burkholderia cenocepacia AU 1054] gi|206561777|ref|YP_002232542.1| GTPase ObgE [Burkholderia cenocepacia J2315] gi|123245305|sp|Q1BZE0|OBG_BURCA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266698|sp|B4E5X0|OBG_BURCJ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|105891850|gb|ABF75015.1| GTP1/OBG subdomain protein [Burkholderia cenocepacia AU 1054] gi|198037819|emb|CAR53763.1| putative conserved GTP-binding protein [Burkholderia cenocepacia J2315] Length = 370 Score = 255 bits (651), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 158/333 (47%), Positives = 224/333 (67%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V+ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVYAIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+DV L +PVGT + + D LI DL + QR++LA G Sbjct: 61 YAKKHLARNGENGRGSDCYGKGGDDVTLRMPVGTIISDMDTGELIADLTEHDQRVMLAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT V Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPSKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGV 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E+V A I+ EL Y+ L +K + L+++D V D + + Sbjct: 241 LLHLVDLAPFDESVDPVAEATAIVGELRKYDEALYEKPRWLVLNKLDMVPEDEREARVAD 300 Query: 296 LATQCGQ--VPFEFSSITGHGIPQILECLHDKI 326 + G FE S++TG G + ++D + Sbjct: 301 FLDRFGWDGPVFEISALTGQGCEALCYAIYDYL 333 >gi|107099771|ref|ZP_01363689.1| hypothetical protein PaerPA_01000789 [Pseudomonas aeruginosa PACS2] Length = 386 Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 138/268 (51%), Positives = 197/268 (73%), Gaps = 4/268 (1%) Query: 21 ISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSG 80 +SFRREKFIE GGP+GG GG GG ++++A NLNTL+D+RY + F AQ GE G ++ +G Sbjct: 1 MSFRREKFIEKGGPNGGDGGDGGSIYLEADVNLNTLVDYRYTRRFDAQRGENGGSKDCTG 60 Query: 81 AKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYY 140 AKG+D++L VPVGT V + + +I DL + GQR+++A GG G GN FKSSTN+AP Sbjct: 61 AKGDDLILPVPVGTTVIDANTQEIIGDLTEPGQRLMVAQGGWHGLGNTRFKSSTNRAPRQ 120 Query: 141 ANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI 200 PG G+ + + L+LK++AD+G++GLPNAGKSTF+ +V+ AKPK+ADYPFTTL PNLG+ Sbjct: 121 TTPGKPGEARDLKLELKVLADVGLLGLPNAGKSTFIRAVSAAKPKVADYPFTTLVPNLGV 180 Query: 201 VKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQA-AYQ 256 V G YK F++ADIPG+I+ A +GAG+G RFLKH RT +LLH+V + L+E+ A A + Sbjct: 181 VSVGRYKSFVVADIPGLIEGAAEGAGLGIRFLKHLARTRILLHLVDMAPLDESDPADAAE 240 Query: 257 CILDELSAYNSELRKKIEIVGLSQIDTV 284 I+ EL ++ L ++ + L+++D + Sbjct: 241 VIVRELGRFSPALTERERWLVLNKMDQI 268 >gi|17231231|ref|NP_487779.1| GTPase ObgE [Nostoc sp. PCC 7120] gi|81852836|sp|Q8YQT0|OBG_ANASP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|17132873|dbj|BAB75438.1| GTP-binding protein [Nostoc sp. PCC 7120] Length = 342 Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 150/325 (46%), Positives = 223/325 (68%), Gaps = 7/325 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ + +G GG G ++FRREK++ GGP GG+GGRGG V A NL TL+DFR Sbjct: 1 MQFIDQAQIEVEAGKGGDGIVAFRREKYVPAGGPSGGNGGRGGSVIFVAVENLQTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+ FKA G +G N +GA G+D+++ VP GT +++ + L+ DL Q Q +I+A G Sbjct: 61 YKHIFKADDGGRGGPNNCTGASGKDLIVQVPCGTTIYDAETGDLLGDLTQPNQELIIAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN +F S+ N+AP Y+ PG+ G+ K++ L+LKL+A++GIIGLPNAGKST ++S++ Sbjct: 121 GKGGLGNQYFLSNRNRAPEYSLPGLPGERKLLRLELKLLAEVGIIGLPNAGKSTLISSLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V++ + + ADIPG+I+ A GAG+G FL+H ERT V Sbjct: 181 AARPKIADYPFTTLIPNLGVVRKPTGDGTVFADIPGLIEGAADGAGLGHDFLRHIERTRV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ A ++V Y I EL AY L ++++I+ L++ID VD +T+ + LA Q Sbjct: 241 LLHLIDATSDDVIRDYNTIEQELQAYGRGLNERMQILALNKIDAVDRETVDLEA--LAIQ 298 Query: 300 CGQVP----FEFSSITGHGIPQILE 320 + F S++T G+ +L+ Sbjct: 299 LNHLSHAPVFLISAVTRTGLEPMLQ 323 >gi|187932266|ref|YP_001892251.1| GTPase ObgE [Francisella tularensis subsp. mediasiatica FSC147] gi|261266796|sp|B2SEA8|OBG_FRATM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|187713175|gb|ACD31472.1| GTP-binding protein Obg/CgtA family [Francisella tularensis subsp. mediasiatica FSC147] Length = 334 Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 143/304 (47%), Positives = 199/304 (65%), Gaps = 4/304 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE + +++G GG G +SFRREK++ GGPDGG GG GG ++++A N+NTLID+R Sbjct: 1 MRFVDEVVIKLQAGKGGNGCVSFRREKYVPRGGPDGGDGGNGGSIYLKADENVNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ + A++G G RN G GED+ L VPVGT VF+ D I ++ Q GQ L G Sbjct: 61 YKREYYAENGRPGEGRNCYGKAGEDLYLVVPVGTSVFDIDTNKKIGEVLQHGQTFKLVSG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN HFKSSTNQAP G G+ K + L+L L+AD+ ++GLPNAGKST + SV+ Sbjct: 121 GKRGIGNTHFKSSTNQAPRKFTLGEEGEYKEVRLELNLLADVALLGLPNAGKSTLIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PK+ADYPFTT+YP+LG+VK G F++ADIPG+I+ A +GAG+G RFLKH R + Sbjct: 181 EATPKVADYPFTTMYPHLGVVKVGVDSFVMADIPGVIEGAAEGAGLGLRFLKHLTRARCV 240 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH+V E + Y + EL Y+ EL K + +++ID + +D + +K E Sbjct: 241 LHVVDICPFSESDPVENYFAVEKELEKYSQELFDKPRFLVINKIDLL-ADKVEQKCQEFV 299 Query: 298 TQCG 301 Q G Sbjct: 300 EQIG 303 >gi|293390547|ref|ZP_06634881.1| GTPase ObgE [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951081|gb|EFE01200.1| GTPase ObgE [Aggregatibacter actinomycetemcomitans D7S-1] Length = 391 Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 150/330 (45%), Positives = 222/330 (67%), Gaps = 6/330 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA +++ +GDGG G SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIHVEAGDGGNGCASFRREKYIPKGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F A+ GE G N +G +G+D+ L VPVGT+ + D +I DL Q G ++++A G Sbjct: 61 FEKRFAAERGENGRSANCTGHRGKDITLHVPVGTRAIDNDTQEVIGDLTQNGMKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTAGEKRDLLLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDDNRSFVIADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIV--SALEENVQAAYQCILD-ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V + ++++ A I++ EL Y+ L +K + ++IDT+ + + E+ Sbjct: 241 LIHLVDINPIDDSNPADNVAIIESELFQYSESLAEKPRWLVFNKIDTLSDEEAHARAKEI 300 Query: 297 ATQCGQVP--FEFSSITGHGIPQILECLHD 324 + G+ + S+ TG PQ+ + D Sbjct: 301 TERLGREEGYYLISAATGKNAPQLCRDIMD 330 >gi|285017713|ref|YP_003375424.1| GTP binding protein [Xanthomonas albilineans GPE PC73] gi|283472931|emb|CBA15436.1| putative gtp binding protein [Xanthomonas albilineans] Length = 356 Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 137/245 (55%), Positives = 182/245 (74%), Gaps = 1/245 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MK +DEA++ + +G+GG G I FRREKFI GGPDGG GG GG +W+ A NLNTL+DFR Sbjct: 1 MKLVDEAEIQVTAGNGGNGCIGFRREKFIPLGGPDGGDGGNGGSIWLVADENLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ F+AQ GE GM R G GED+ +TVPVGT V + +I DL G R+++A G Sbjct: 61 HQRAFRAQRGENGMGRQMYGKAGEDLTITVPVGTVVINVETDEVIGDLIAHGDRLLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS +AP A PG G+++ + L+LKL+AD+G++G PNAGKSTF+ +V+ Sbjct: 121 GKGGLGNMHFKSSVTRAPRKATPGEQGEQRTLKLELKLLADVGLLGFPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTLYPNLG+V E Y+ F++ADIPG+I+ A GAG+G +FL+H +RT + Sbjct: 181 AATPKVADYPFTTLYPNLGVVSVEAYRSFVIADIPGLIEGAADGAGLGAQFLRHLQRTRL 240 Query: 240 LLHIV 244 LLH+V Sbjct: 241 LLHLV 245 >gi|260892110|ref|YP_003238207.1| GTP-binding protein Obg/CgtA [Ammonifex degensii KC4] gi|260864251|gb|ACX51357.1| GTP-binding protein Obg/CgtA [Ammonifex degensii KC4] Length = 417 Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 153/322 (47%), Positives = 218/322 (67%), Gaps = 8/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D K+Y+++GDGG G ++FRREK++ FGGP GG GGRGG V ++A + L TLIDF ++ Sbjct: 2 FYDHLKIYVKAGDGGNGCVAFRREKYVPFGGPAGGDGGRGGHVILKADARLRTLIDFHFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ G G R+G GED++L VPVGT V + +I DL ++GQ +I+A GG Sbjct: 62 KHFKAERGGHGQGNCRTGRDGEDLILRVPVGTVVRDAATGEIIADLVKDGQEVIVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F + TNQAP +A G G+E+ I L+LKL+AD G++GLPNAGKST L+ V+ A Sbjct: 122 GGRGNARFATPTNQAPRFAEKGEPGEERWIELELKLLADAGLVGLPNAGKSTLLSRVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADYPFTTL P LG+V+ E + F+LAD+PG+I+ AH GAG+G RFL+H ERT +L+ Sbjct: 182 RPKIADYPFTTLEPCLGVVRVEEGESFVLADLPGLIEGAHVGAGLGHRFLRHVERTRLLV 241 Query: 242 HIVSALEENVQ---AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ E A++ + EL Y+ EL ++ +I+ +++D S + L R K L Sbjct: 242 HVLDMSEMAAMDPLKAFEVVNRELMLYDPELAERPQIIAANKMDLPGSEENLKRLKESLK 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 ++ F S+ TG GI ++ Sbjct: 302 DY--EI-FPISAATGQGIEALI 320 >gi|148828059|ref|YP_001292812.1| GTPase ObgE [Haemophilus influenzae PittGG] gi|261266824|sp|A5UI23|OBG_HAEIG RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|148719301|gb|ABR00429.1| conserved hypothetical GTP-binding protein [Haemophilus influenzae PittGG] Length = 403 Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 153/340 (45%), Positives = 218/340 (64%), Gaps = 6/340 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE+ + I +GDGG G +SFRREKFI GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFIDESLIRIEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A+ GE G + +G +G+D++L VPVGT+ + D + DL Q GQ++++A G Sbjct: 61 FNKRFAAERGENGRSSDCTGRRGKDIILPVPVGTRAIDNDTKETLGDLTQHGQKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++G PNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLLLELMLLADVGMLGFPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDDSHSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V N I EL Y+ +L +K + ++IDT+ + + E+ Sbjct: 241 LIHLVDIAPIDGSNPADNVAIIESELFQYSEKLSEKPRWLVFNKIDTMSDEEAEERVREI 300 Query: 297 ATQCG--QVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 Q G + + S+ TG +P + + D I + E E Sbjct: 301 TEQLGWEEDYYLISAATGKNVPPLCRDIMDFIIANPREAE 340 >gi|118498271|ref|YP_899321.1| GTPase ObgE [Francisella tularensis subsp. novicida U112] gi|194324455|ref|ZP_03058228.1| GTP-binding protein Obg/CgtA [Francisella tularensis subsp. novicida FTE] gi|208780299|ref|ZP_03247641.1| GTP-binding protein Obg/CgtA [Francisella novicida FTG] gi|261266797|sp|A0Q8K2|OBG_FRATN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|118424177|gb|ABK90567.1| GTP-binding protein, GTP1/Obg family [Francisella novicida U112] gi|194321520|gb|EDX19005.1| GTP-binding protein Obg/CgtA [Francisella tularensis subsp. novicida FTE] gi|208743948|gb|EDZ90250.1| GTP-binding protein Obg/CgtA [Francisella novicida FTG] Length = 334 Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 143/304 (47%), Positives = 199/304 (65%), Gaps = 4/304 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE + +++G GG G +SFRREK++ GGPDGG GG GG ++++A N+NTLID+R Sbjct: 1 MRFVDEVVIKLQAGKGGNGCVSFRREKYVPRGGPDGGDGGNGGSIYLKADENVNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ + A++G G RN G GED+ L VPVGT VF+ D I ++ Q GQ L G Sbjct: 61 YKREYYAENGRPGEGRNCYGKAGEDLYLVVPVGTSVFDIDTNKKIGEVLQHGQTFKLVSG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN HFKSSTNQAP G G+ K + L+L L+AD+ ++GLPNAGKST + SV+ Sbjct: 121 GKRGIGNTHFKSSTNQAPRKFTLGEEGEYKEVRLELNLLADVALLGLPNAGKSTLIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PK+ADYPFTT+YP+LG+VK G F++ADIPG+I+ A +GAG+G RFLKH R + Sbjct: 181 EATPKVADYPFTTMYPHLGVVKVGVDSFVMADIPGVIEGAAEGAGLGLRFLKHLTRARCV 240 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH+V E + Y + EL Y+ EL K + +++ID + +D + +K E Sbjct: 241 LHVVDICPFNESDPVENYFAVEKELEKYSQELFDKPRFLVINKIDLL-ADKVEQKCQEFV 299 Query: 298 TQCG 301 Q G Sbjct: 300 EQIG 303 >gi|156935707|ref|YP_001439623.1| GTPase ObgE [Cronobacter sakazakii ATCC BAA-894] gi|261266785|sp|A7MJF1|OBG_ENTS8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|156533961|gb|ABU78787.1| hypothetical protein ESA_03576 [Cronobacter sakazakii ATCC BAA-894] Length = 390 Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 140/292 (47%), Positives = 204/292 (69%), Gaps = 12/292 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G+++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTMGTPGEKRDLQLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIV-------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH++ S EN + I+ EL Y+ +L K + ++ID + Sbjct: 241 LLHLIDLDPIDGSDPAENA----RIIVGELEKYSEKLASKPRWLVFNKIDLL 288 >gi|56708736|ref|YP_170632.1| GTPase ObgE [Francisella tularensis subsp. tularensis SCHU S4] gi|110671208|ref|YP_667765.1| GTPase ObgE [Francisella tularensis subsp. tularensis FSC198] gi|224457936|ref|ZP_03666409.1| GTPase ObgE [Francisella tularensis subsp. tularensis MA00-2987] gi|254371347|ref|ZP_04987348.1| GTP-binding protein [Francisella tularensis subsp. tularensis FSC033] gi|254375079|ref|ZP_04990559.1| GTP-binding protein [Francisella novicida GA99-3548] gi|254875594|ref|ZP_05248304.1| GTP-binding protein [Francisella tularensis subsp. tularensis MA00-2987] gi|81597014|sp|Q5NEB0|OBG_FRATT RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|122970825|sp|Q14FR3|OBG_FRAT1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|56605228|emb|CAG46364.1| GTP-binding protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110321541|emb|CAL09747.1| GTP-binding protein [Francisella tularensis subsp. tularensis FSC198] gi|151569586|gb|EDN35240.1| GTP-binding protein [Francisella tularensis subsp. tularensis FSC033] gi|151572797|gb|EDN38451.1| GTP-binding protein [Francisella novicida GA99-3548] gi|254841593|gb|EET20029.1| GTP-binding protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282160050|gb|ADA79441.1| GTPase ObgE [Francisella tularensis subsp. tularensis NE061598] gi|332679007|gb|AEE88136.1| GTP-binding protein Obg [Francisella cf. novicida Fx1] Length = 334 Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 143/304 (47%), Positives = 199/304 (65%), Gaps = 4/304 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE + +++G GG G +SFRREK++ GGPDGG GG GG ++++A N+NTLID+R Sbjct: 1 MRFVDEVVIKLQAGKGGNGCVSFRREKYVPRGGPDGGDGGNGGSIYLKADENVNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ + A++G G RN G GED+ L VPVGT VF+ D I ++ Q GQ L G Sbjct: 61 YKREYYAENGRPGEGRNCYGKAGEDLYLVVPVGTSVFDIDTNKKIGEVLQHGQTFKLVSG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN HFKSSTNQAP G G+ K + L+L L+AD+ ++GLPNAGKST + SV+ Sbjct: 121 GKRGIGNTHFKSSTNQAPRKFTLGEEGEYKEVRLELNLLADVALLGLPNAGKSTLIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PK+ADYPFTT+YP+LG+VK G F++ADIPG+I+ A +GAG+G RFLKH R + Sbjct: 181 EATPKVADYPFTTMYPHLGVVKVGVDSFVMADIPGVIEGAAEGAGLGLRFLKHLTRARCV 240 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH+V E + Y + EL Y+ EL K + +++ID + +D + +K E Sbjct: 241 LHVVDICPFNESDPVENYFAVEKELEKYSQELFDKPRFLVINKIDLL-ADKVEQKCQEFV 299 Query: 298 TQCG 301 Q G Sbjct: 300 EQIG 303 >gi|148826478|ref|YP_001291231.1| GTPase ObgE [Haemophilus influenzae PittEE] gi|261266823|sp|A5UDJ7|OBG_HAEIE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|148716638|gb|ABQ98848.1| GTPase ObgE [Haemophilus influenzae PittEE] Length = 403 Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 153/340 (45%), Positives = 218/340 (64%), Gaps = 6/340 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE+ + I +GDGG G +SFRREKFI GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFIDESLIRIEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A+ GE G + +G +G+D++L VPVGT+ + D + DL Q GQ++++A G Sbjct: 61 FNKRFAAERGENGRSSDCTGRRGKDIILPVPVGTRAIDNDTKETLGDLTQHGQKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++G PNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLLLELMLLADVGMLGFPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDDSHSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V N I EL Y+ +L +K + ++IDT+ + + E+ Sbjct: 241 LIHLVDIAPIDGSNPADNVAIIESELFQYSEKLSEKPRWLVFNKIDTMSDEEAEERVREI 300 Query: 297 ATQCG--QVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 Q G + + S+ TG +P + + D I + E E Sbjct: 301 TEQLGWEEDYYLISAATGKNVPPLCRDIMDFIIANPREAE 340 >gi|309973626|gb|ADO96827.1| Ribosome-associated GTPase CgtA [Haemophilus influenzae R2846] Length = 390 Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 153/340 (45%), Positives = 218/340 (64%), Gaps = 6/340 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE+ + I +GDGG G +SFRREKFI GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFIDESLIRIEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A+ GE G + +G +G+D++L VPVGT+ + D + DL Q GQ++++A G Sbjct: 61 FNKRFAAERGENGRSSDCTGRRGKDIILPVPVGTRAIDNDTKETLGDLTQHGQKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++G PNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLLLELMLLADVGMLGFPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDDSHSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V N I EL Y+ +L +K + ++IDT+ + + E+ Sbjct: 241 LIHLVDIAPIDGSNPADNVAIIESELFQYSEKLSEKPRWLVFNKIDTMSDEEAEERVREI 300 Query: 297 ATQCG--QVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 Q G + + S+ TG +P + + D I + E E Sbjct: 301 TEQLGWEEDYYLISAATGKNVPPLCRDIMDFIIANPREAE 340 >gi|319775190|ref|YP_004137678.1| GTPase involved in cell partioning and DNA repair [Haemophilus influenzae F3047] gi|329122888|ref|ZP_08251459.1| Spo0B-associated GTP-binding protein [Haemophilus aegyptius ATCC 11116] gi|317449781|emb|CBY85988.1| GTPase involved in cell partioning and DNA repair [Haemophilus influenzae F3047] gi|327471819|gb|EGF17259.1| Spo0B-associated GTP-binding protein [Haemophilus aegyptius ATCC 11116] Length = 390 Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 153/340 (45%), Positives = 218/340 (64%), Gaps = 6/340 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE+ + I +GDGG G +SFRREKFI GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFIDESLIRIEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A+ GE G + +G +G+D++L VPVGT+ + D + DL Q GQ++++A G Sbjct: 61 FNKRFAAERGENGRSSDCTGRRGKDIILPVPVGTRAIDNDTKETLGDLTQHGQKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++G PNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLLLELMLLADVGMLGFPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDDSHSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V N I EL Y+ +L +K + ++IDT+ + + E+ Sbjct: 241 LIHLVDIAPIDGSNPADNVAIIESELFQYSEKLSEKPRWLVFNKIDTMSDEEAEERVREI 300 Query: 297 ATQCG--QVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 Q G + + S+ TG +P + + D I + E E Sbjct: 301 TEQLGWEEDYYLISAATGKNVPPLCRDIMDFIIANPREAE 340 >gi|256752172|ref|ZP_05493038.1| GTP-binding protein Obg/CgtA [Thermoanaerobacter ethanolicus CCSD1] gi|256748986|gb|EEU62024.1| GTP-binding protein Obg/CgtA [Thermoanaerobacter ethanolicus CCSD1] Length = 423 Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 152/331 (45%), Positives = 222/331 (67%), Gaps = 5/331 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A++YI++GDGG G ISFRREK++ +GGPDGG GG+GGDV A NL+TL+DF+Y+ Sbjct: 2 FIDTARIYIKAGDGGNGIISFRREKYVAYGGPDGGDGGKGGDVIFIADPNLSTLLDFKYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + AQ+GE G +N+ G GED+ + VPVGT + ++ +I DL + Q+ I+ GG Sbjct: 62 KKYIAQNGENGRGKNQYGKNGEDLYIKVPVGTLIINDETGEIIADLVKPNQKAIVLRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F + T + P +A G G+E + L+LKL+AD+G+IG PNAGKST LAS TRA Sbjct: 122 GGRGNAKFATPTLKTPRFAESGEKGKEMWVRLELKLLADVGLIGFPNAGKSTLLASCTRA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIA+YPFTTL PNLG+V+ K F++ADIPG+I+ AH+G G+G FL+H ERT +L+H Sbjct: 182 KPKIANYPFTTLTPNLGVVEHKGKSFVMADIPGLIEGAHRGEGLGHDFLRHIERTKMLIH 241 Query: 243 I--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELAT 298 + VSA E + ++ I +EL Y+ L +IV ++ID + + E+ Sbjct: 242 VVDVSASEGRDPIEDFEKINEELKLYSERLLTLPQIVAANKIDIQSGKENFPAFEKEIKK 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 + +V + S++T GI ++L+ + + SI Sbjct: 302 RGYEV-YPISALTKVGIDKLLDKTIEILSSI 331 >gi|62260518|gb|AAX77912.1| unknown protein [synthetic construct] Length = 369 Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 143/304 (47%), Positives = 199/304 (65%), Gaps = 4/304 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE + +++G GG G +SFRREK++ GGPDGG GG GG ++++A N+NTLID+R Sbjct: 27 MRFVDEVVIKLQAGKGGNGCVSFRREKYVPRGGPDGGDGGNGGSIYLKADENVNTLIDYR 86 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ + A++G G RN G GED+ L VPVGT VF+ D I ++ Q GQ L G Sbjct: 87 YKREYYAENGRPGEGRNCYGKAGEDLYLVVPVGTSVFDIDTNKKIGEVLQHGQTFKLVSG 146 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN HFKSSTNQAP G G+ K + L+L L+AD+ ++GLPNAGKST + SV+ Sbjct: 147 GKRGIGNTHFKSSTNQAPRKFTLGEEGEYKEVRLELNLLADVALLGLPNAGKSTLIRSVS 206 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PK+ADYPFTT+YP+LG+VK G F++ADIPG+I+ A +GAG+G RFLKH R + Sbjct: 207 EATPKVADYPFTTMYPHLGVVKVGVDSFVMADIPGVIEGAAEGAGLGLRFLKHLTRARCV 266 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH+V E + Y + EL Y+ EL K + +++ID + +D + +K E Sbjct: 267 LHVVDICPFNESDPVENYFAVEKELEKYSQELFDKPRFLVINKIDLL-ADKVEQKCQEFV 325 Query: 298 TQCG 301 Q G Sbjct: 326 EQIG 329 >gi|332708823|ref|ZP_08428794.1| Obg family GTPase CgtA [Lyngbya majuscula 3L] gi|332352365|gb|EGJ31934.1| Obg family GTPase CgtA [Lyngbya majuscula 3L] Length = 349 Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 146/321 (45%), Positives = 217/321 (67%), Gaps = 3/321 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ + +G+GG G ++FRREK++ GGP GG+GGRGG V + A +L TL+DF+ Sbjct: 1 MQFIDQAEIEVVAGNGGDGIVAFRREKYVPAGGPAGGNGGRGGSVILNAIEHLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y F+A++G +G NR+G G D ++ VP GT V+ D ++ DL Q Q + +A G Sbjct: 61 YAHCFRAENGGRGGPNNRTGKNGSDRIIEVPCGTVVYNADTGEMLGDLVQPRQMLCVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP +A PG+ G++ + L+LKL+A++GIIGLPNAGKST +++++ Sbjct: 121 GKGGLGNRHFLSNHNRAPEHALPGLPGEQLRLRLELKLLAEVGIIGLPNAGKSTLISALS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL PNLG+V++ + + ADIPG+I AHQG G+G FL+H ERT + Sbjct: 181 AARPKIANYPFTTLIPNLGVVRKPTGDGTVFADIPGLIAGAHQGIGLGHDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ + A YQ I EL AY EL ++ +I+ L+++D VD D + L Q Sbjct: 241 LLHLIDITAADPIADYQTIQQELQAYGRELPERPQILALNKVDAVDQDMIEEVSTYL-NQ 299 Query: 300 CGQVP-FEFSSITGHGIPQIL 319 QVP F S++ G+ +L Sbjct: 300 LTQVPVFSISAVAKIGLDALL 320 >gi|54113469|gb|AAV29368.1| NT02FT1617 [synthetic construct] Length = 334 Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 143/304 (47%), Positives = 199/304 (65%), Gaps = 4/304 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE + +++G GG G +SFRREK++ GGPDGG GG GG ++++A N+NTLID+R Sbjct: 1 MRFVDEVVIKLQAGKGGNGCVSFRREKYVPRGGPDGGDGGNGGSIYLKADENVNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ + A++G G RN G GED+ L VPVGT VF+ D I ++ Q GQ L G Sbjct: 61 YKREYYAENGRPGEGRNCYGKAGEDLYLVVPVGTSVFDIDTNKKIGEVLQHGQTFKLVSG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN HFKSSTNQAP G G+ K + L+L L+AD+ ++GLPNAGKST + SV+ Sbjct: 121 GKRGIGNTHFKSSTNQAPRKFTLGEEGEYKEVRLELNLLADVALLGLPNAGKSTLIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PK+ADYPFTT+YP+LG+VK G F++ADIPG+I+ A +GAG+G RFLKH R + Sbjct: 181 EATPKVADYPFTTMYPHLGVVKVGVDSFVMADIPGVIEGAAEGAGLGLRFLKHLTRARCV 240 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH+V E + Y + EL Y+ EL K + +++ID + +D + +K E Sbjct: 241 LHVVDICPFNESDPVENYFAVEKELEKYSQELFDKPRFLVINKIDLL-ADKVEQKCQEFV 299 Query: 298 TQCG 301 Q G Sbjct: 300 EQIG 303 >gi|301169596|emb|CBW29197.1| GTPase involved in cell partioning and DNA repair [Haemophilus influenzae 10810] Length = 390 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 153/340 (45%), Positives = 218/340 (64%), Gaps = 6/340 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE+ + I +GDGG G +SFRREKFI GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFIDESLIRIEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A+ GE G + +G +G+D++L VPVGT+ + D + DL Q GQ++++A G Sbjct: 61 FNKRFAAERGENGRSSDCTGRRGKDIILPVPVGTRAIDNDTKETLGDLTQHGQKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++G PNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLLLELMLLADVGMLGFPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDDSHSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V N I EL Y+ +L +K + ++IDT+ + + E+ Sbjct: 241 LIHLVDIAPIDGSNPADNVAIIESELFQYSEKLSEKPRWLVFNKIDTMSDEEAEERVREI 300 Query: 297 ATQCG--QVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 Q G + + S+ TG +P + + D I + E E Sbjct: 301 TEQLGWKEDYYLISAATGKNVPPLCRDIMDFIIANPREAE 340 >gi|304440695|ref|ZP_07400579.1| obg family GTPase CgtA [Peptoniphilus duerdenii ATCC BAA-1640] gi|304370882|gb|EFM24504.1| obg family GTPase CgtA [Peptoniphilus duerdenii ATCC BAA-1640] Length = 421 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 142/298 (47%), Positives = 209/298 (70%), Gaps = 6/298 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+A + +++G GG G +++RREKF GGP GG GGRGG V I+ + ++TL+DFRY+ Sbjct: 2 FIDKAHINVQAGKGGDGAVAWRREKFEPAGGPHGGDGGRGGSVIIKTDTGIHTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA +GE GM + + GAKGED++L VPVGT V +E+ +I DL++ I+A GG Sbjct: 62 RKYKAPNGENGMSKLKYGAKGEDIILKVPVGTLVKDEESGGVIVDLNKPNMEYIIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA FK+ST QAP +A G LG+ + I L+LK++AD+G++G PN GKST L+ V+ A Sbjct: 122 GGRGNAKFKNSTRQAPSFAEAGNLGENRDIVLELKMLADVGLVGFPNVGKSTLLSVVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V G +E F+LADIPG+I+ A +G G+GD FL+H ERT VL+ Sbjct: 182 RPKIANYHFTTLEPNLGVVSLGPEESFVLADIPGLIEGASEGIGLGDEFLRHIERTKVLI 241 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 H++ A + + Y+ I+DEL YN +L +K ++ ++++D S+ +K E Sbjct: 242 HVIDASGSEGRDPISDFYK-IMDELKGYNEKLMEKPMVIFMNKMDIPGSEEGLKKVTE 298 >gi|312795087|ref|YP_004028009.1| GTP-binding protein CgtA (probably involved in DNA repair) [Burkholderia rhizoxinica HKI 454] gi|312166862|emb|CBW73865.1| GTP-binding protein CgtA (probably involved in DNA repair) [Burkholderia rhizoxinica HKI 454] Length = 378 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 155/333 (46%), Positives = 227/333 (68%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V+ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVYAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A++GE G + G GED+ L +PVGT + ++D LI DL + QR++LA G Sbjct: 61 YAKKHQARNGENGRGSDCYGKAGEDITLRMPVGTMITDKDTGELIADLTEHDQRVLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF+ASV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTEGKPGERRMLRLELKVLADVGLLGMPNAGKSTFIASVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPAKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGI 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + ++ V + I++EL Y+ L +K + L+++D + + + Sbjct: 241 LLHLVDLAPFDDGVDPVAEAGAIVNELRKYDEALYRKPRWLVLNKVDMIAEHEREARVAD 300 Query: 296 LATQCG-QVP-FEFSSITGHGIPQILECLHDKI 326 + G Q P F+ S++TG G + ++D + Sbjct: 301 FVKRFGWQGPVFQISALTGLGCENMCYAVYDYL 333 >gi|160900916|ref|YP_001566498.1| GTP-binding protein Obg/CgtA [Delftia acidovorans SPH-1] gi|261266817|sp|A9BP68|OBG_DELAS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|160366500|gb|ABX38113.1| GTP-binding protein Obg/CgtA [Delftia acidovorans SPH-1] Length = 371 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 146/334 (43%), Positives = 224/334 (67%), Gaps = 9/334 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + I +GDGG G +SFR EK+ EFGGPDGG GGRGG V+ A NLNTL+D+R Sbjct: 1 MKFVDEAYIDISAGDGGNGCVSFRHEKYKEFGGPDGGDGGRGGHVYAVADVNLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + A GE G + GA G D+ L +PVGT + + + ++ +L G+ + +A G Sbjct: 61 FSRRHDATRGEHGKGSDMFGAAGNDITLRMPVGTIISDAETGEVLYELLTAGEVVTIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG+GN FKS+ N+AP PG G+ K + L+LK++AD+G++G+PNAGKSTF+A+V+ Sbjct: 121 GDGGYGNLRFKSAINRAPRQKTPGWPGERKNLKLELKVLADVGLLGMPNAGKSTFIAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ ++ F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVAAEQSFVVADIPGLIEGASEGAGLGHQFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +++V Q I+ EL Y++EL K + L+++D V ++ A + + Sbjct: 241 LLHVVDLAPFDDSVDPVAQAKAIVGELQKYDAELYNKPRWLVLNKLDMVPAEERAARVKD 300 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKI 326 + G V FE S++T G ++ ++ + Sbjct: 301 FVKRFKWKGPV-FEISALTREGCEVLIRTIYKHV 333 >gi|145634039|ref|ZP_01789750.1| GTP-binding protein [Haemophilus influenzae PittAA] gi|145268483|gb|EDK08476.1| GTP-binding protein [Haemophilus influenzae PittAA] Length = 390 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 153/340 (45%), Positives = 218/340 (64%), Gaps = 6/340 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE+ + I +GDGG G +SFRREKFI GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFIDESLIRIEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A+ GE G + +G +G+D++L VPVGT+ + D + DL Q GQ++++A G Sbjct: 61 FNKRFAAERGENGRSSDCTGRRGKDIILPVPVGTRAIDNDTKETLGDLTQHGQKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++G PNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLLLELMLLADVGMLGFPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDDSHSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V N I EL Y+ +L +K + ++IDT+ + + E+ Sbjct: 241 LIHLVDIAPIDGSNPADNVAIIESELFQYSEKLSEKPRWLVFNKIDTMSDEEAEERVREI 300 Query: 297 ATQCG--QVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 Q G + + S+ TG +P + + D I + E E Sbjct: 301 TEQLGWEEDYYLISAATGKNVPPLCRDIMDFIIANPREAE 340 >gi|260596188|ref|YP_003208759.1| GTPase CgtA [Cronobacter turicensis z3032] gi|260215365|emb|CBA27375.1| Uncharacterized GTP-binding protein yhbZ [Cronobacter turicensis z3032] Length = 390 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 140/292 (47%), Positives = 204/292 (69%), Gaps = 12/292 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEAAILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDVTVKVPVGTRVIDQGTGETMGDMTKHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G+++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTMGTPGEKRDLQLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIV-------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH++ S EN + I+ EL Y+ +L K + ++ID + Sbjct: 241 LLHLIDLDPIDGSDPAENA----RIIVGELEKYSEKLASKPRWLVFNKIDLL 288 >gi|114567127|ref|YP_754281.1| spo0B-associated GTP-binding protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317886|sp|Q0AWJ4|OBG_SYNWW RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|114338062|gb|ABI68910.1| spo0B-associated GTP-binding protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 419 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 142/321 (44%), Positives = 221/321 (68%), Gaps = 7/321 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+A+++++ GDGG G ++FRREK++ GGP GG GGRG +V + A L TL+DF+Y+ Sbjct: 2 FVDQARIFVKGGDGGNGIVAFRREKYVPMGGPSGGDGGRGANVILVADEGLKTLMDFKYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ G G +N GA G+D+ + VPVGT + +++ ++ DL +GQ ++A GG Sbjct: 62 RHFKAERGAHGQGKNMHGAWGQDLRVKVPVGTVIKDDESGEVLADLLLQGQEAVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F S+ N+AP ++ G G+EK I L+LKL+AD+G++G PNAGKST ++ V+ A Sbjct: 122 GGRGNARFSSAINKAPSFSENGEPGEEKWIRLELKLLADVGLVGFPNAGKSTLISRVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADYPFTTL PNLG+V ++ F+LADIPG+I+ AHQG G+G FL+H ERT V+L Sbjct: 182 RPKIADYPFTTLVPNLGVVMTKERDTFVLADIPGLIEGAHQGLGLGHEFLRHIERTRVIL 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 I+ A + +V Y+ + EL +N +L K+ +++ +++D D+ AR+ L + Sbjct: 242 FILDAAQTEGRDVVEDYRILYRELELHNPDLLKRPQLIVANKMDIPDARDNARR---LES 298 Query: 299 QCGQVPFEFSSITGHGIPQIL 319 + G+ S++TG G+ +++ Sbjct: 299 ELGKTVHCISAVTGQGVEELM 319 >gi|261868533|ref|YP_003256455.1| GTPase ObgE [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413865|gb|ACX83236.1| GTPase ObgE [Aggregatibacter actinomycetemcomitans D11S-1] Length = 391 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 149/330 (45%), Positives = 223/330 (67%), Gaps = 6/330 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA +++ +GDGG G SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIHVEAGDGGNGCASFRREKYIPKGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F A+ GE G+ N +G +G+D+ L VPVGT+ + D +I DL + G ++++A G Sbjct: 61 FEKRFAAERGENGLSANCTGHRGKDITLHVPVGTRAIDNDTQEVIGDLTKNGMKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTAGEKRDLLLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDDNRSFVIADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIV--SALEENVQAAYQCILD-ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V + ++++ A I++ EL Y+ L +K + ++IDT+ + + E+ Sbjct: 241 LIHLVDINPIDDSNPADNVAIIESELFQYSESLAEKPRWLVFNKIDTLSDEEAHARAKEI 300 Query: 297 ATQCGQVP--FEFSSITGHGIPQILECLHD 324 + G+ + S+ TG PQ+ + D Sbjct: 301 TERLGREEGYYLISAATGKNAPQLCRDIMD 330 >gi|224538339|ref|ZP_03678878.1| hypothetical protein BACCELL_03230 [Bacteroides cellulosilyticus DSM 14838] gi|224520038|gb|EEF89143.1| hypothetical protein BACCELL_03230 [Bacteroides cellulosilyticus DSM 14838] Length = 390 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 152/326 (46%), Positives = 210/326 (64%), Gaps = 5/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+I GGPDGG GGRGG + ++ N TL+ RY Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYIPNGGPDGGDGGRGGHIILRGNRNYWTLLHLRYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G GED ++ VP GT V+ + ICD+ + GQ ++L GG Sbjct: 66 RHALAGHGESGSKNRSFGKDGEDKIIEVPCGTVVYNAETGEYICDVTEHGQEVVLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + ++LKL+AD+G++G PNAGKST LASV+ A Sbjct: 126 GGLGNWHFKTATRQAPRFAQPGEPMQEMTVIMELKLLADVGLVGFPNAGKSTLLASVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTTL PNLGIV K F++ADIPGII+ A G G+G RFL+H ER +LL Sbjct: 186 KPKIANYPFTTLEPNLGIVSYRDSKSFVMADIPGIIEGASAGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V A +N++ Y+ +L+ELS +N E+ K ++ +++ D +D + + + T Sbjct: 246 FMVPADSDNIRKEYEILLNELSTFNPEMLDKQRVLAITKSDMLDQELMDEIE---PTLPA 302 Query: 302 QVPFEF-SSITGHGIPQILECLHDKI 326 VP F SSITG G+ + + L +++ Sbjct: 303 NVPHVFISSITGMGLSVLKDILWEEL 328 >gi|189501719|ref|YP_001957436.1| hypothetical protein Aasi_0267 [Candidatus Amoebophilus asiaticus 5a2] gi|261266649|sp|B3ER55|OBG_AMOA5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|189497160|gb|ACE05707.1| hypothetical protein Aasi_0267 [Candidatus Amoebophilus asiaticus 5a2] Length = 334 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 151/330 (45%), Positives = 219/330 (66%), Gaps = 10/330 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE K Y+++G GG G + FRREKF+ GGPDGG GG+GGD+ ++ L+TL+ +Y+ Sbjct: 6 FIDEVKKYVQAGHGGPGVVHFRREKFVPKGGPDGGDGGKGGDIILKGNKQLSTLLHLKYR 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+ G+ G R+GA G ++L VP+GT + D +++ D+ ++GQ+ IL GG Sbjct: 66 KHIVAEDGKSGEGGCRTGADGTSIILEVPLGTVAKDIDSGNILVDITEDGQQTILLHGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+ T QAP +A PG G+E I L+LKL+A++G++G PNAGKST LAS++ A Sbjct: 126 GGQGNVHFKTPTQQAPRHAQPGESGEEGWIKLELKLLAEVGLVGFPNAGKSTLLASISAA 185 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA+YPFTTL P LG+V +EG+ F+LAD+PGII+ A G G+G RFLKH ER VL Sbjct: 186 KPKIANYPFTTLVPQLGVVAYREGH-SFVLADMPGIIEGASMGKGLGTRFLKHIERNRVL 244 Query: 241 LHIVSALEE-NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 + ++SA + N+ Y +L EL +Y+ +L KK I+ +S++D + ++ K L Q Sbjct: 245 VLMISADDTANIVQTYTSLLKELKSYSEDLFKKPRILVISKLDLIGAEEKVTIKKLLPKQ 304 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSI 329 V SS+TG G L+ DKI+ + Sbjct: 305 IDCV--FISSVTGEG----LQKFKDKIWKL 328 >gi|229844756|ref|ZP_04464895.1| GTPase ObgE [Haemophilus influenzae 6P18H1] gi|229812470|gb|EEP48160.1| GTPase ObgE [Haemophilus influenzae 6P18H1] Length = 416 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 153/340 (45%), Positives = 217/340 (63%), Gaps = 6/340 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE+ + I +GDGG G +SFRREKFI GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFIDESLIRIEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A+ GE G + +G +G+D++L VPVGT+ + D + DL Q GQ++++A G Sbjct: 61 FNKRFAAERGENGRSSDCTGRRGKDIILPVPVGTRAIDNDTKETLGDLTQHGQKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++G PNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLLLELMLLADVGMLGFPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDDSHSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V N I EL Y+ +L +K + ++IDT+ + + E+ Sbjct: 241 LIHLVDIAPIDGSNPADNVAIIESELFQYSEKLSEKPRWLVFNKIDTMSDEEAEERVREI 300 Query: 297 ATQCGQVP--FEFSSITGHGIPQILECLHDKIFSIRGENE 334 Q G + S+ TG +P + + D I + E E Sbjct: 301 TEQLGWEEGYYLISAATGKNVPPLCRDIMDFIIANPREAE 340 >gi|145636993|ref|ZP_01792657.1| GTPase ObgE [Haemophilus influenzae PittHH] gi|145269851|gb|EDK09790.1| GTPase ObgE [Haemophilus influenzae PittHH] Length = 403 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 153/340 (45%), Positives = 217/340 (63%), Gaps = 6/340 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE+ + I +GDGG G +SFRREKFI GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFIDESLIRIEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A+ GE G + +G +G+D++L VPVGT+ + D + DL Q GQ++++A G Sbjct: 61 FNKRFAAERGENGRSSDCTGRRGKDIILPVPVGTRAIDNDTKETLGDLTQHGQKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++G PNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLLLELMLLADVGMLGFPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDDSHSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V N I EL Y+ +L +K + ++IDT+ + + E+ Sbjct: 241 LIHLVDIAPIDGSNPADNVAIIESELFQYSEKLSEKPRWLVFNKIDTMSDEEAEERVREI 300 Query: 297 ATQCGQVP--FEFSSITGHGIPQILECLHDKIFSIRGENE 334 Q G + S+ TG +P + + D I + E E Sbjct: 301 TEQLGWEEGYYLISAATGKNVPPLCRDIMDFIIANPREAE 340 >gi|46579342|ref|YP_010150.1| GTPase ObgE [Desulfovibrio vulgaris str. Hildenborough] gi|120603099|ref|YP_967499.1| GTPase ObgE [Desulfovibrio vulgaris DP4] gi|81567050|sp|Q72DK0|OBG_DESVH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266762|sp|A1VF56|OBG_DESVV RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|46448756|gb|AAS95409.1| GTP-binding protein, GTP1/OBG family [Desulfovibrio vulgaris str. Hildenborough] gi|120563328|gb|ABM29072.1| GTP1/OBG sub domain protein [Desulfovibrio vulgaris DP4] gi|311233168|gb|ADP86022.1| GTP-binding protein Obg/CgtA [Desulfovibrio vulgaris RCH1] Length = 366 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 148/331 (44%), Positives = 222/331 (67%), Gaps = 10/331 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + +R+G GG G +SFRREKFI GGPDGG+GG GG V ++ T+ L +L DFR Sbjct: 1 MRFVDEATINVRAGKGGNGCLSFRREKFIPRGGPDGGNGGDGGSVILRPTNRLLSLYDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDG---ISLICDLDQEGQRIIL 117 Q++++A++G+ GM G KGED+VL +P+GT VFE D +I DL ++ Sbjct: 61 LQRNYEARNGQSGMGSQCDGRKGEDLVLELPLGTLVFEVDDEGHEQMIADLSDPDGVFVV 120 Query: 118 APGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 A GG GG GN HFKSST +AP +A G G+E+ + L+LK++AD G++GLPNAGKSTF++ Sbjct: 121 ARGGRGGKGNEHFKSSTMRAPRFAQKGEPGEERRLRLELKILADAGLLGLPNAGKSTFIS 180 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVKEGY---KEFILADIPGIIKNAHQGAGIGDRFLKHT 234 ++ A+PKIA YPFTTL PNLG++ + + ++ADIPG+I+ AH G G+G RFLKH Sbjct: 181 RISAARPKIAAYPFTTLTPNLGVMIDEVDPDRRMVIADIPGLIEGAHTGQGLGHRFLKHV 240 Query: 235 ERTHVLLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 ERT L+HI+S + EN + I +EL+ ++ LR++ +I +++ID + + Sbjct: 241 ERTRFLVHILSIEDIDPENPWTGFDLINEELARFDEVLREREQIEVVNKIDLRTPEEVDA 300 Query: 292 KKNELATQCGQVPFEFSSITGHGIPQILECL 322 + + A Q G+ F S++ G GI ++++ + Sbjct: 301 LRQQ-AAQQGRRIFFISAMHGEGIEEVVDAM 330 >gi|145641940|ref|ZP_01797514.1| GTPase ObgE [Haemophilus influenzae R3021] gi|145273419|gb|EDK13291.1| GTPase ObgE [Haemophilus influenzae 22.4-21] Length = 403 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 153/340 (45%), Positives = 217/340 (63%), Gaps = 6/340 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE+ + I +GDGG G +SFRREKFI GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFIDESLIRIEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A+ GE G + +G +G+D++L VPVGT+ + D + DL Q GQ++++A G Sbjct: 61 FNKRFAAERGENGRSSDCTGRRGKDIILPVPVGTRAIDNDTKETLGDLTQHGQKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++G PNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLLLELMLLADVGMLGFPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDDSHSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V N I EL Y+ +L +K + ++IDT+ + + E+ Sbjct: 241 LIHLVDIAPIDGSNPADNVAIIESELFQYSEKLSEKPRWLVFNKIDTMSDEEAEERVREI 300 Query: 297 ATQCGQVP--FEFSSITGHGIPQILECLHDKIFSIRGENE 334 Q G + S+ TG +P + + D I + E E Sbjct: 301 TEQLGWEEGYYLISAATGKNVPPLCRDIMDFIIANPREAE 340 >gi|332884636|gb|EGK04893.1| GTPase obg [Dysgonomonas mossii DSM 22836] Length = 392 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 150/322 (46%), Positives = 213/322 (66%), Gaps = 6/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G FRREK+I GGPDGG GG GGD+ ++A N+ TL+ +YQ Sbjct: 6 FIDYVKIYCRSGKGGRGSTHFRREKYIPKGGPDGGDGGDGGDIILRANRNMWTLLHLKYQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G R +G G+ ++ VP GT ++ + +CD+ ++G+ ++L GG Sbjct: 66 RHVLAGHGESGSGRLSTGKSGDSKIIDVPCGTVAYDAETGEYLCDVTEDGKEVVLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+STNQAP YA PG QE+ + L+LK++AD+G++G PNAGKST L+ V+ A Sbjct: 126 GGKGNNHFKTSTNQAPRYAQPGEPFQERRVILELKVLADVGLVGFPNAGKSTLLSVVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTTL P +GIV YK F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 KPKIANYPFTTLEPKIGIVSYRDYKSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V A +++ Y+ +L+EL+ YN EL K I+ +S+ D +D + + L Sbjct: 246 FMVPADADDIHQEYRVLLNELAQYNPELLDKRRILAISKADMLDDELM----EALEADLP 301 Query: 302 QVPFEF-SSITGHGIPQILECL 322 ++P F SSITG+ I + + L Sbjct: 302 EIPHIFISSITGYNITGLKDML 323 >gi|94676950|ref|YP_589065.1| GTPase ObgE [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|261266751|sp|Q1LSJ9|OBG_BAUCH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|94220100|gb|ABF14259.1| GTP1/Obg family protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 336 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 139/309 (44%), Positives = 203/309 (65%), Gaps = 15/309 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G ISFRREK+I FG +GG GG GG+VW+QA NLNTLID+ Sbjct: 1 MKFIDEATIIVAAGDGGNGCISFRREKYIPFGPAEGGDGGNGGNVWLQADENLNTLIDYH 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q +F A++G+ G +N +G G+D+ + VP+GT+V +++ ++ DL Q +++A G Sbjct: 61 FQHNFHAENGKHGQGKNFTGKCGKDLTIKVPIGTRVVDQNTNEILGDLIVHQQYLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN HFKSS N P G G+ + + L+L L+AD+G++GLPN GKST + +V+ Sbjct: 121 GLRGLGNNHFKSSANCTPRKKTNGTKGEIRRLQLELILLADVGLLGLPNVGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+A+YPFTTL PNLG+V+ K+ FI+ADIPG+IK A GAG+G RFLKH ER + Sbjct: 181 AAKPKVANYPFTTLVPNLGVVQVHKKQSFIIADIPGLIKGAADGAGLGIRFLKHLERCRI 240 Query: 240 LLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVD----------- 285 LLH++ + + + I++EL Y+ +L K + +++D +D Sbjct: 241 LLHLIDLAPADQSSPVENASIIINELKRYSEKLATKPSWLVFNKLDLIDKREALNIAQTI 300 Query: 286 SDTLARKKN 294 SD L +K N Sbjct: 301 SDALNQKHN 309 >gi|167586047|ref|ZP_02378435.1| GTPase ObgE [Burkholderia ubonensis Bu] Length = 370 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 156/333 (46%), Positives = 224/333 (67%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V+ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVYAIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+D+ L +PVGT + + D LI DL + Q+++LA G Sbjct: 61 YAKKHLARNGENGRGSDCYGKGGDDITLRMPVGTVITDMDTGELIADLTEHDQKVMLAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMLRLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT V Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPSKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGV 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E+V A I+ EL Y+ L +K + L+++D V D + + Sbjct: 241 LLHLVDLAPFDESVDPVAEATAIVGELRKYDEALYEKPRWLVLNKLDMVPEDEREARVAD 300 Query: 296 LATQCGQ--VPFEFSSITGHGIPQILECLHDKI 326 + G FE S++TG G + ++D + Sbjct: 301 FLERFGWDGPVFEISALTGQGCEALCYAIYDYL 333 >gi|241758988|ref|ZP_04757100.1| Obg family GTPase CgtA [Neisseria flavescens SK114] gi|241320809|gb|EER57042.1| Obg family GTPase CgtA [Neisseria flavescens SK114] Length = 382 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 209/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTHHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|20807398|ref|NP_622569.1| GTPase ObgE [Thermoanaerobacter tengcongensis MB4] gi|81848147|sp|Q8RBA5|OBG_THETN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|20515918|gb|AAM24173.1| predicted GTPase [Thermoanaerobacter tengcongensis MB4] Length = 424 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 147/336 (43%), Positives = 221/336 (65%), Gaps = 5/336 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D A++YI++GDGG G ISFRREK++ +GGPDGG GG+GGDV A NL+TL+DF+ Sbjct: 1 MVFIDTARIYIKAGDGGNGFISFRREKYVPYGGPDGGDGGKGGDVIFIADPNLSTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ + A++GE G +N+ G GED+ + VPVGT + ++ +I DL + Q+ I+ G Sbjct: 61 YKRKYIAENGENGKSKNQYGKDGEDLYIKVPVGTTIINDETGEVIADLIKPYQKAIVLKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F + T + P +A G G+E + L+LKL+AD+G++G PNAGKST LAS + Sbjct: 121 GKGGRGNAKFATPTLKTPRFAESGEKGREMWVRLELKLLADVGLVGFPNAGKSTLLASCS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 RA+PKIA+YPFTTL PNLG+V+ K F++ADIPG+I+ AH+G G+G FL+H ERT +L Sbjct: 181 RARPKIANYPFTTLTPNLGVVEHKGKSFVMADIPGLIEGAHRGEGLGHDFLRHIERTKML 240 Query: 241 LHIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 +H+V S + V+ ++ I +EL Y+ L +IV +++D + + E Sbjct: 241 IHVVDVSGSEGRDPVE-DFEKINEELRLYDERLVTLPQIVAANKMDLPEGKEKYPRFEEE 299 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + G + S++T G+ +L+ + + SI E Sbjct: 300 IKKRGYEVYPISALTKEGLDALLDKTIEILSSIPAE 335 >gi|37523944|ref|NP_927321.1| GTPase ObgE [Gloeobacter violaceus PCC 7421] gi|81708174|sp|Q7ND61|OBG_GLOVI RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|35214950|dbj|BAC92316.1| glr4375 [Gloeobacter violaceus PCC 7421] Length = 335 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 142/310 (45%), Positives = 210/310 (67%), Gaps = 1/310 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D +++ + G GG G +++RREK++ GGP GG GG GG V ++AT+NL TL+DF+ Sbjct: 1 MQFIDRSEIEVEGGRGGDGMVAYRREKYVPAGGPAGGDGGHGGAVVLEATANLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+ F+A G KG +N +GAKG+D+V+ VP GT V + I DL + GQR+++A G Sbjct: 61 YRHRFEADDGTKGGPKNLTGAKGKDLVIAVPCGTVVQDAVTGETIGDLTEPGQRLVVAVG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP YA G LGQ++ + L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GRGGHGNTHFASNQNRAPDYATEGRLGQQRKLLLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P+IADYPFTTL PNLG+V++ + + ADIPG+I+ AHQG G+G FL+H ERT V Sbjct: 181 AARPRIADYPFTTLVPNLGVVRKVTGDGVVFADIPGLIEGAHQGVGLGHEFLRHIERTRV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+ +++ + A Y+ ++DEL Y EL K IV L++ D + + L+T+ Sbjct: 241 LVQLIALDSADPLADYRTVIDELGRYGRELLHKSRIVALNKADVCLPEEAEHWRRILSTE 300 Query: 300 CGQVPFEFSS 309 G+ S+ Sbjct: 301 TGEPVLVISA 310 >gi|134301217|ref|YP_001121185.1| GTPase ObgE [Francisella tularensis subsp. tularensis WY96-3418] gi|261266798|sp|A4IVW3|OBG_FRATW RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|134048994|gb|ABO46065.1| GTP-binding protein, Obg/CgtA family [Francisella tularensis subsp. tularensis WY96-3418] Length = 334 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 143/304 (47%), Positives = 198/304 (65%), Gaps = 4/304 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE + +++G GG G +SFRREK++ GGPDGG GG GG ++++A N+NTLID+R Sbjct: 1 MRFVDEVVIKLQAGKGGNGCVSFRREKYVPRGGPDGGDGGNGGSIYLKADENVNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ + A++G G RN G GED+ L VPVGT VF D I ++ Q GQ L G Sbjct: 61 YKREYYAENGRPGEGRNCYGKAGEDLYLVVPVGTSVFNIDTNKKIGEVLQHGQTFKLVSG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN HFKSSTNQAP G G+ K + L+L L+AD+ ++GLPNAGKST + SV+ Sbjct: 121 GKRGIGNTHFKSSTNQAPRKFTLGEEGEYKEVRLELNLLADVALLGLPNAGKSTLIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PK+ADYPFTT+YP+LG+VK G F++ADIPG+I+ A +GAG+G RFLKH R + Sbjct: 181 EATPKVADYPFTTMYPHLGVVKVGVDSFVMADIPGVIEGAAEGAGLGLRFLKHLTRARCV 240 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH+V E + Y + EL Y+ EL K + +++ID + +D + +K E Sbjct: 241 LHVVDICPFNESDPVENYFAVEKELEKYSQELFDKPRFLVINKIDLL-ADKVEQKCQEFV 299 Query: 298 TQCG 301 Q G Sbjct: 300 EQIG 303 >gi|294670998|ref|ZP_06735854.1| hypothetical protein NEIELOOT_02705 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307485|gb|EFE48728.1| hypothetical protein NEIELOOT_02705 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 396 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 209/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYDKPRWLVLNKLDMLDEE 292 >gi|251793092|ref|YP_003007818.1| GTPase ObgE [Aggregatibacter aphrophilus NJ8700] gi|247534485|gb|ACS97731.1| hypothetical protein NT05HA_1379 [Aggregatibacter aphrophilus NJ8700] Length = 390 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 150/330 (45%), Positives = 220/330 (66%), Gaps = 6/330 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRVEAGDGGNGCASFRREKYIPKGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ + A+ GE G N +G +G+D+ L VPVGT+ + D +I DL Q G ++++A G Sbjct: 61 FEKRYAAERGENGRSANCTGHRGKDITLRVPVGTRAIDNDTQEVIGDLTQNGMKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTEGEKRDLLLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDDNRSFVVADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVS--ALEENVQAAYQCILD-ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V ++E+ A I++ EL Y+ L +K + ++IDT+ + + + Sbjct: 241 LIHLVDIHPIDESDPADNVAIIESELFQYSESLAEKPRWLVFNKIDTMSDEEAHERAEAI 300 Query: 297 ATQCGQVP--FEFSSITGHGIPQILECLHD 324 A + G + S+ TG +PQ+ + D Sbjct: 301 AERLGWTENYYLISAATGKNVPQLCRDIMD 330 >gi|300867945|ref|ZP_07112585.1| GTPase obg [Oscillatoria sp. PCC 6506] gi|300334082|emb|CBN57763.1| GTPase obg [Oscillatoria sp. PCC 6506] Length = 350 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 133/289 (46%), Positives = 206/289 (71%), Gaps = 1/289 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ + +G GG G ++FRREK++ GGP GG+GG+GG V + A L TL+DFR Sbjct: 1 MQFIDQAEIQVVAGKGGDGMVAFRREKYVPAGGPSGGNGGKGGSVNMVAVERLQTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + FK + G++G +N +GA+G + + VP GT V++ + L+ DL + GQ + +A G Sbjct: 61 YARIFKGEDGKRGGPKNMTGAQGSERTIEVPCGTVVYDAETNELLGDLIKPGQTLCVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F +++N+AP YA PG G+ +++ L+LKL+A++GIIGLPNAGKST +++++ Sbjct: 121 GKGGLGNKCFLTNSNRAPDYAMPGKDGEVRMLRLELKLLAEVGIIGLPNAGKSTLISALS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V++ + + ADIPG+I+ AH GAG+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRKPTGDGTVFADIPGLIEGAHAGAGLGHDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT 288 LLH++ +EN A Y I +EL AY L + I+ ++++D +D+++ Sbjct: 241 LLHLIDITDENPVANYLTIQEELKAYGRGLADRQLILAVNKVDAIDTES 289 >gi|312143479|ref|YP_003994925.1| GTP-binding protein Obg/CgtA [Halanaerobium sp. 'sapolanicus'] gi|311904130|gb|ADQ14571.1| GTP-binding protein Obg/CgtA [Halanaerobium sp. 'sapolanicus'] Length = 423 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 147/329 (44%), Positives = 217/329 (65%), Gaps = 6/329 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + +++GDGG G +SFRREKF + GGPDGG GG GGD+ ++ +NTL D RY Sbjct: 2 FIDEVEFKVKAGDGGNGVVSFRREKFEDMGGPDGGDGGDGGDIILEVDEGMNTLADLRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +KA+ G+ G +N+ G G+D++L VP GT V++ D S + DL + G++ I+A GG Sbjct: 62 NIYKAEKGKNGKGKNQHGKNGDDLILRVPPGTMVYDADTDSFLADLKEAGEKHIVAKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA FK ST +AP ++ G G+ + + L+LK++AD+G++G PN GKST ++ V+ A Sbjct: 122 GGRGNARFKKSTRKAPRFSENGAQGEFRKLRLELKVLADVGLVGYPNVGKSTLISQVSHA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+VK G Y+ F++ADIPGII+ AHQG G+GD FLKH ERT +L+ Sbjct: 182 KPKIASYHFTTLTPNLGVVKYGEYQSFVMADIPGIIEGAHQGTGLGDEFLKHLERTRLLV 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQID-TVDSDTLARKKNELA 297 H+ VS +E + ++ I +EL YN L +++ L++ID + R K+EL Sbjct: 242 HVIDVSGIEGRDPLEDFEKINNELQKYNEYLASLEQVIALNKIDLPAAKQNIERVKSELN 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI 326 + G F S++T G +++ L ++ Sbjct: 302 DR-GYSVFPISAVTSEGCQKLVYHLGQRL 329 >gi|298376219|ref|ZP_06986175.1| Obg family GTPase CgtA [Bacteroides sp. 3_1_19] gi|298267256|gb|EFI08913.1| Obg family GTPase CgtA [Bacteroides sp. 3_1_19] Length = 386 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 149/322 (46%), Positives = 215/322 (66%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G FRREK+I GGPDGG GGRGG V+++ N TL+ +Y+ Sbjct: 6 FVDYVKIYCRSGKGGRGSSHFRREKYIPKGGPDGGDGGRGGHVYLRGNRNYWTLLHLKYE 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A +GE G + SG GED V+ VP GT V++ + ICD+ ++GQ+++L GG Sbjct: 66 RHIMATNGESGSAKRSSGKDGEDRVIEVPCGTVVYDAETGEFICDVTEDGQQVMLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FK++TNQAP Y+ PG E+ + L+LKL+AD+G++G PNAGKST L+ V+ A Sbjct: 126 GGLGNFNFKTATNQAPRYSQPGEPALERTVILQLKLLADVGLVGFPNAGKSTLLSVVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTTL PNLGIV + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 KPKIANYPFTTLEPNLGIVSYRDNRSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V A ++++ Y+ + +EL YN EL K ++ +++ D +D + + +L Sbjct: 246 FMVPAEADDIKKEYEILHNELVKYNPELLDKRRVLAITKSDMLDEELIESLSQDLPE--- 302 Query: 302 QVPFEF-SSITGHGIPQILECL 322 +P+ F SSITG GI ++ + L Sbjct: 303 GIPYVFISSITGLGIVELKDLL 324 >gi|260551519|ref|ZP_05825703.1| GTPase [Acinetobacter sp. RUH2624] gi|260405513|gb|EEW99006.1| GTPase [Acinetobacter sp. RUH2624] Length = 406 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 150/333 (45%), Positives = 224/333 (67%), Gaps = 8/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + + +GDGG G SFRREKF+ FGGPDGG GGRGG ++IQA + +TL+D+R Sbjct: 1 MRFVDEAVITVEAGDGGNGVASFRREKFVPFGGPDGGDGGRGGSIYIQADDDTSTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+A+ G+ G N +G GEDVVL VPVGT + + D +I DL ++GQ+I++A G Sbjct: 61 YTRKFRAERGKNGAGANCTGRGGEDVVLKVPVGTTIVDTDSGDIIGDLVEDGQKILVAGG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ + I L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GEGGLGNTHFKSSTNRAPRKCTTGTKGEFREIRLELKVLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTT+ PNLG+V + ++ F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AAKPKVADYPFTTMVPNLGVVDADRHRSFVMADIPGLIEGAAEGAGLGIRFLKHLARTRI 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHI+ + + I++EL ++ L K ++ L+++D + ++ + Sbjct: 241 LLHIIDVQPIDGSDPAHNAKAIMNELVKFSPTLAKLPVVLVLNKLDQIAEESREEWCQHI 300 Query: 297 ATQ---CGQVPFEFSSITGHGIPQILECLHDKI 326 + G V F+ S + G +++ L D+I Sbjct: 301 LEELEWTGPV-FKTSGLLSEGTKEVVYYLMDQI 332 >gi|301309412|ref|ZP_07215354.1| Obg family GTPase CgtA [Bacteroides sp. 20_3] gi|300832501|gb|EFK63129.1| Obg family GTPase CgtA [Bacteroides sp. 20_3] Length = 386 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 149/322 (46%), Positives = 215/322 (66%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G FRREK+I GGPDGG GGRGG V+++ N TL+ +Y+ Sbjct: 6 FVDYVKIYCRSGKGGRGSSHFRREKYIPKGGPDGGDGGRGGHVYLRGNRNYWTLLHLKYE 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A +GE G + SG GED V+ VP GT V++ + ICD+ ++GQ+++L GG Sbjct: 66 RHIMATNGESGSAKRSSGKDGEDRVIEVPCGTVVYDAETGEFICDVTEDGQQVMLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FK++TNQAP Y+ PG E+ + L+LKL+AD+G++G PNAGKST L+ V+ A Sbjct: 126 GGLGNFNFKTATNQAPRYSQPGEPALERTVILQLKLLADVGLVGFPNAGKSTLLSVVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTTL PNLGIV + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 KPKIANYPFTTLEPNLGIVSYRDNRSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V A ++++ Y+ + +EL YN EL K ++ +++ D +D + + +L Sbjct: 246 FMVPAEADDIKKEYEILHNELVKYNPELLDKRRVLAITKSDMLDEELIEALSQDLPE--- 302 Query: 302 QVPFEF-SSITGHGIPQILECL 322 +P+ F SSITG GI ++ + L Sbjct: 303 GIPYVFISSITGLGIVELKDLL 324 >gi|238756416|ref|ZP_04617725.1| Uncharacterized GTP-binding protein yhbZ [Yersinia ruckeri ATCC 29473] gi|238705346|gb|EEP97754.1| Uncharacterized GTP-binding protein yhbZ [Yersinia ruckeri ATCC 29473] Length = 390 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 140/289 (48%), Positives = 207/289 (71%), Gaps = 4/289 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGD+++ A NLNTLID+R Sbjct: 1 MKFVDEAAILVVAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDIYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F+A+ G+ G R+ +G +G+D+ + VPVGT+V ++D +I D+ + QR+++A G Sbjct: 61 FVKSFRAERGQNGQSRDCTGKRGKDITIKVPVGTRVLDQDTGEVIGDMTRHQQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GFHGLGNARFKSSVNRAPRQKTMGTEGETRELMLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ Y++ F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVRMDYEQSFVVADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ E N + I++EL Y++ L +K + +++D +D Sbjct: 241 LLHLIDIAPVDESNPIENAKVIINELQQYSANLAEKPRWLVFNKVDLID 289 >gi|256841470|ref|ZP_05546977.1| obg family GTPase CgtA [Parabacteroides sp. D13] gi|256737313|gb|EEU50640.1| obg family GTPase CgtA [Parabacteroides sp. D13] Length = 384 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 149/322 (46%), Positives = 215/322 (66%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G FRREK+I GGPDGG GGRGG V+++ N TL+ +Y+ Sbjct: 6 FVDYVKIYCRSGKGGRGSSHFRREKYIPKGGPDGGDGGRGGHVYLRGNRNYWTLLHLKYE 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A +GE G + SG GED V+ VP GT V++ + ICD+ ++GQ+++L GG Sbjct: 66 RHIMATNGESGSAKRSSGKDGEDRVIEVPCGTVVYDAETGEFICDVTEDGQQVMLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FK++TNQAP Y+ PG E+ + L+LKL+AD+G++G PNAGKST L+ V+ A Sbjct: 126 GGLGNFNFKTATNQAPRYSQPGEPALERTVILQLKLLADVGLVGFPNAGKSTLLSVVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTTL PNLGIV + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 KPKIANYPFTTLEPNLGIVSYRDNRSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V A ++++ Y+ + +EL YN EL K ++ +++ D +D + + +L Sbjct: 246 FMVPAEADDIKKEYEILHNELVKYNPELLDKRRVLAITKSDMLDEELIEALSQDLPE--- 302 Query: 302 QVPFEF-SSITGHGIPQILECL 322 +P+ F SSITG GI ++ + L Sbjct: 303 GIPYVFISSITGLGIVELKDLL 324 >gi|150008511|ref|YP_001303254.1| GTPase ObgE [Parabacteroides distasonis ATCC 8503] gi|255014312|ref|ZP_05286438.1| GTPase ObgE [Bacteroides sp. 2_1_7] gi|262383361|ref|ZP_06076497.1| obg family GTPase CgtA [Bacteroides sp. 2_1_33B] gi|261277655|sp|A6LD68|OBG_PARD8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|149936935|gb|ABR43632.1| GTP-binding protein Obg [Parabacteroides distasonis ATCC 8503] gi|262294259|gb|EEY82191.1| obg family GTPase CgtA [Bacteroides sp. 2_1_33B] Length = 386 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 149/322 (46%), Positives = 215/322 (66%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G FRREK+I GGPDGG GGRGG V+++ N TL+ +Y+ Sbjct: 6 FVDYVKIYCRSGKGGRGSSHFRREKYIPKGGPDGGDGGRGGHVYLRGNRNYWTLLHLKYE 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A +GE G + SG GED V+ VP GT V++ + ICD+ ++GQ+++L GG Sbjct: 66 RHIMATNGESGSAKRSSGKDGEDRVIEVPCGTVVYDAETGEFICDVTEDGQQVMLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FK++TNQAP Y+ PG E+ + L+LKL+AD+G++G PNAGKST L+ V+ A Sbjct: 126 GGLGNFNFKTATNQAPRYSQPGEPALERTVILQLKLLADVGLVGFPNAGKSTLLSVVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTTL PNLGIV + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 KPKIANYPFTTLEPNLGIVSYRDNRSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V A ++++ Y+ + +EL YN EL K ++ +++ D +D + + +L Sbjct: 246 FMVPAEADDIKKEYEILHNELVKYNPELLDKRRVLAITKSDMLDEELIEALSQDLPE--- 302 Query: 302 QVPFEF-SSITGHGIPQILECL 322 +P+ F SSITG GI ++ + L Sbjct: 303 GIPYVFISSITGLGIVELKDLL 324 >gi|225011589|ref|ZP_03702027.1| GTP-binding protein Obg/CgtA [Flavobacteria bacterium MS024-2A] gi|225004092|gb|EEG42064.1| GTP-binding protein Obg/CgtA [Flavobacteria bacterium MS024-2A] Length = 333 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 146/322 (45%), Positives = 208/322 (64%), Gaps = 2/322 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y+ SG+GG G I REK+I GGPDGG GGRGG V ++ S L TL F+++ Sbjct: 6 FVDYVKLYVSSGNGGKGSIHLHREKYITKGGPDGGDGGRGGHVILRGNSQLWTLYTFKFK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HF A HG G K SGA+GED+ + +P+GT V + ++ ++ ++ Q +I+ GG Sbjct: 66 KHFSAGHGGDGSKNRSSGAQGEDIYIDIPMGTVVRSTETNEILFEITEDNQEVIIQEGGL 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSST Q P YA PGI G+ I L+LK++AD+G++G PNAGKST LA++T A Sbjct: 126 GGRGNWHFKSSTRQTPRYAQPGIEGKTFQITLELKVLADVGLVGFPNAGKSTLLAALTSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLGIV+ ++ F++ADIPGII+ A +G G+G FL+H ER +LL Sbjct: 186 KPKIADYEFTTLKPNLGIVEYRDFQSFVMADIPGIIEGAAEGKGLGHYFLRHIERNSILL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A +N++ + + EL YN EL K +V LS+ D +D + E+ T Sbjct: 246 FVIPADTKNLKKEFDILQKELIKYNPELLDKQFMVVLSKADLLDDELKEEYAKEMKTLFK 305 Query: 302 QVP-FEFSSITGHGIPQILECL 322 +P SS T + + ++ + L Sbjct: 306 DIPHLIISSATQYHLMELKDAL 327 >gi|68249464|ref|YP_248576.1| GTPase ObgE [Haemophilus influenzae 86-028NP] gi|145638304|ref|ZP_01793914.1| GTPase ObgE [Haemophilus influenzae PittII] gi|81336109|sp|Q4QM31|OBG_HAEI8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|68057663|gb|AAX87916.1| conserved hypothetical GTP-binding protein [Haemophilus influenzae 86-028NP] gi|145272633|gb|EDK12540.1| GTPase ObgE [Haemophilus influenzae PittII] gi|309751455|gb|ADO81439.1| Ribosome-associated GTPase CgtA [Haemophilus influenzae R2866] Length = 390 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 153/340 (45%), Positives = 218/340 (64%), Gaps = 6/340 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE+ + I +GDGG G +SFRREKFI GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFIDESLIRIEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A+ GE G + +G +G+D++L VPVGT+ + D + DL Q GQ++++A G Sbjct: 61 FNKRFAAERGENGRSSDCTGRRGKDIILPVPVGTRAIDNDTKETLGDLTQHGQKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLLLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDDSHSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V N I EL Y+ +L +K + ++IDT+ + + E+ Sbjct: 241 LIHLVDIAPIDGSNPADNVAIIESELFQYSEKLSEKPRWLVFNKIDTMSDEEAEERVREI 300 Query: 297 ATQCG--QVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 Q G + + S+ T +P + + D I + E E Sbjct: 301 TEQLGWEEDYYLISAATRKNVPPLCRDIMDFIIANPREAE 340 >gi|332799467|ref|YP_004460966.1| GTPase obg [Tepidanaerobacter sp. Re1] gi|332697202|gb|AEE91659.1| GTPase obg [Tepidanaerobacter sp. Re1] Length = 422 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 150/332 (45%), Positives = 217/332 (65%), Gaps = 5/332 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+Y+++GDGG G ++FRREK++ GGP GG GGRGGDV + L+TL+DF+Y+ Sbjct: 2 FVDHAKIYVKAGDGGNGVVAFRREKYVPRGGPSGGDGGRGGDVILMVDPGLSTLMDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H+KA+ GE G N+ G ED+V+ VP GT V + + ++ DL + G+ ++A GG Sbjct: 62 IHYKAKRGEHGQGSNKFGRSAEDLVINVPPGTLVKDAETGEILADLVENGESFVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F SS ++AP +A G G+E+ I L+LKLIAD+G+IG PNAGKST L+ +T A Sbjct: 122 GGRGNARFTSSVHRAPDFAEKGEPGEERWIVLELKLIADVGLIGFPNAGKSTLLSRMTSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY---KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 KPKIADYPFTTL PNLG+V G F+LADIPG+I+ AH+G G+G FL+H ERT + Sbjct: 182 KPKIADYPFTTLSPNLGVVDPGLGKGSSFVLADIPGLIEGAHEGQGLGYEFLRHVERTRL 241 Query: 240 LLHI--VSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 L+H+ +S +E + + I EL Y+ EL +K ++V +++D + + + Sbjct: 242 LVHVLDMSGIERDPLKGFYAINQELVKYSKELSEKPQVVVANKMDLPKAQENYKIIKPII 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 + G S TGHGI Q+L+ + + + I Sbjct: 302 EKSGYTIMPVSGATGHGIKQLLQYIGEMLSKI 333 >gi|227357087|ref|ZP_03841457.1| GTP-binding protein [Proteus mirabilis ATCC 29906] gi|227162779|gb|EEI47742.1| GTP-binding protein [Proteus mirabilis ATCC 29906] Length = 397 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 141/306 (46%), Positives = 209/306 (68%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ I +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 9 MKFVDEAKILIVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYMVADENLNTLIDYR 68 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A+ GE G R+ +G +G+D+ + VPVGT+ + +I DL GQ+ ++A G Sbjct: 69 FTKSYRAERGENGQSRDCTGKRGQDITINVPVGTRARDLATGEIIADLTVHGQKQMVAKG 128 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 129 GFHGLGNTRFKSSVNRAPRQRTMGTPGESREVLLELMLLADVGMLGMPNAGKSTFIRAVS 188 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + ++ F++ADIPG+I+ A GAG+G +FLKH ER V Sbjct: 189 AAKPKVADYPFTTLVPSLGVVRMDSHQSFVVADIPGLIEGAADGAGLGIQFLKHLERCRV 248 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + V+ A + I+ EL Y+ +L +K + +++D +D+D +K Sbjct: 249 LLHLIDIDPIDGSDPVENA-KIIISELEKYSDKLAQKPRWLVFNKVDLLDADEAKQKAQA 307 Query: 296 LATQCG 301 + G Sbjct: 308 IVEALG 313 >gi|315634746|ref|ZP_07890030.1| Spo0B-associated GTP-binding protein [Aggregatibacter segnis ATCC 33393] gi|315476694|gb|EFU67442.1| Spo0B-associated GTP-binding protein [Aggregatibacter segnis ATCC 33393] Length = 391 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 150/330 (45%), Positives = 221/330 (66%), Gaps = 6/330 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRVEAGDGGNGCASFRREKYIPKGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F A+ GE G N +G +G+D+ L VPVGT+ + D +I DL + G R+++A G Sbjct: 61 FEKRFAAERGENGRSANCTGHRGKDITLRVPVGTRAIDNDTQEIIGDLTKNGMRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSINRAPRQKTMGTPGEKRDLLLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDDNRSFVIADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIV--SALEENVQAAYQCILD-ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V + ++++ A I++ EL Y+ L K + ++IDT+ + + E+ Sbjct: 241 LIHLVDINPIDDSDPADNVAIIESELFQYSESLADKPRWLVFNKIDTMSDEEAHERAEEI 300 Query: 297 ATQCG--QVPFEFSSITGHGIPQILECLHD 324 A + G + + S+ G +PQ+ + D Sbjct: 301 AKRLGWEEDYYLISAAAGKNVPQLCRDIMD 330 >gi|91215631|ref|ZP_01252601.1| GTP-binding protein Obg [Psychroflexus torquis ATCC 700755] gi|91186097|gb|EAS72470.1| GTP-binding protein Obg [Psychroflexus torquis ATCC 700755] Length = 339 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 145/322 (45%), Positives = 207/322 (64%), Gaps = 2/322 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K++++SG+GG G RREK+I GGPDGG GGRGG + + +L TL +++ Sbjct: 6 FVDYIKIHLKSGNGGKGSAHMRREKYIPKGGPDGGDGGRGGHIIFKTNKDLWTLFHLKFK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H +A HG G K +GA GED + +P+GT + + +I ++ + + I+A GG Sbjct: 66 RHIRATHGGHGGKETSTGAGGEDQYIEIPLGTVIRDTVTNEVIKEMTEHEEEYIVAQGGM 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN++FKSSTNQ P Y PGILGQE I L+LKL+AD+G++G PNAGKST L+ +T A Sbjct: 126 GGKGNSYFKSSTNQTPRYVQPGILGQELDITLELKLLADVGLVGFPNAGKSTLLSVITAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLGIV+ YK F++ADIPGII+ A +G G+G RFL+H ER LL Sbjct: 186 KPKIANYEFTTLKPNLGIVQYRDYKTFVVADIPGIIEGAAEGKGLGYRFLRHIERNSTLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A +V+ Y+ +LDEL YN EL K ++ +++ D +D + E+ Sbjct: 246 FLIPADAGSVKKQYEILLDELRRYNPELLDKSRVIAITKSDLLDDELKTELAEEIEHAFD 305 Query: 302 QVPFEF-SSITGHGIPQILECL 322 +P F SSI G+ + + L Sbjct: 306 TIPHVFISSIAQQGLQPLKDLL 327 >gi|319638893|ref|ZP_07993651.1| GTP-binding protein [Neisseria mucosa C102] gi|317399797|gb|EFV80460.1| GTP-binding protein [Neisseria mucosa C102] Length = 384 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 209/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYDKPRWLVLNKLDMLDEE 292 >gi|255067748|ref|ZP_05319603.1| Obg family GTPase CgtA [Neisseria sicca ATCC 29256] gi|255047959|gb|EET43423.1| Obg family GTPase CgtA [Neisseria sicca ATCC 29256] Length = 386 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 209/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTHHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSINRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|197287219|ref|YP_002153091.1| GTPase ObgE [Proteus mirabilis HI4320] gi|261277678|sp|B4F2A8|OBG_PROMH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|194684706|emb|CAR46676.1| putative GTP-binding protein [Proteus mirabilis HI4320] Length = 389 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 141/306 (46%), Positives = 209/306 (68%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ I +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEAKILIVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYMVADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A+ GE G R+ +G +G+D+ + VPVGT+ + +I DL GQ+ ++A G Sbjct: 61 FTKSYRAERGENGQSRDCTGKRGQDITINVPVGTRARDLATGEIIADLTVHGQKQMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQRTMGTPGESREVLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + ++ F++ADIPG+I+ A GAG+G +FLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSHQSFVVADIPGLIEGAADGAGLGIQFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + V+ A + I+ EL Y+ +L +K + +++D +D+D +K Sbjct: 241 LLHLIDIDPIDGSDPVENA-KIIISELEKYSDKLAQKPRWLVFNKVDLLDADEAKQKAQA 299 Query: 296 LATQCG 301 + G Sbjct: 300 IVEALG 305 >gi|188532491|ref|YP_001906288.1| GTPase ObgE [Erwinia tasmaniensis Et1/99] gi|261266786|sp|B2VGT5|OBG_ERWT9 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|188027533|emb|CAO95380.1| Putative GTP-binding protein [Erwinia tasmaniensis Et1/99] Length = 392 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 137/305 (44%), Positives = 207/305 (67%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPRGGPDGGDGGDGGDVYMQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G D+++ VPVGT++ ++ + D+ Q++++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGNDILIKVPVGTRIIDQGTGETLGDMTHHQQKMMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTMGTPGEKRDLQLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEQSFVVADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH + E + + IL EL Y+ +L +K + +++D +D + + + Sbjct: 241 LLHTIDLAPIDESDPVENARIILGELEKYSEKLFQKPRWLVFNKVDLLDEEEAESRAKAI 300 Query: 297 ATQCG 301 A G Sbjct: 301 AEALG 305 >gi|220928748|ref|YP_002505657.1| GTP-binding protein Obg/CgtA [Clostridium cellulolyticum H10] gi|261266741|sp|B8I179|OBG_CLOCE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|219999076|gb|ACL75677.1| GTP-binding protein Obg/CgtA [Clostridium cellulolyticum H10] Length = 425 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 147/331 (44%), Positives = 217/331 (65%), Gaps = 4/331 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+Y+++G+GG G +SF REK+I GGPDGG GG+GGDV LNTLIDFRY+ Sbjct: 2 FRDSAKIYVKAGNGGNGMVSFHREKYIAAGGPDGGDGGKGGDVIFVVDEGLNTLIDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++FKA+ G+ G NRSG GED+++ VP+GT V +E ++ DL + GQ ++A GG Sbjct: 62 KNFKAEPGQDGGTSNRSGKNGEDLIIKVPLGTVVKDELTDMVLVDLIKPGQTCVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + T Q P +A G LG+E + L++K+IAD+G++G PN GKST L+ V+ A Sbjct: 122 GGKGNQHFATPTRQVPNFAKSGDLGEEYSLILEMKMIADVGLVGYPNVGKSTILSMVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V+ E K F++ADIPG+I+ AH+G G+G +FL+H ERT +L+ Sbjct: 182 KPKIANYHFTTLVPNLGVVQIEHGKSFVIADIPGLIEGAHEGVGLGHQFLRHVERTKLLV 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+ VS +E + + I EL YN L + +IV +++D ++ + E Sbjct: 242 HVVDVSGVEGRDAVEDFDTINSELQKYNQVLSTRPQIVAANKMDIPGAEENYKAFKEELE 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 + G F S+ T G+ ++L + + + ++ Sbjct: 302 KRGYKVFGISAATNKGLKELLYAVSETLKTL 332 >gi|254253315|ref|ZP_04946633.1| GTP-binding protein [Burkholderia dolosa AUO158] gi|124895924|gb|EAY69804.1| GTP-binding protein [Burkholderia dolosa AUO158] Length = 370 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 156/333 (46%), Positives = 223/333 (66%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V+ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVYAIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+D+ L +PVGT + + D LI DL + GQ+++LA G Sbjct: 61 YAKKHLARNGENGRGSDCYGRGGDDITLRMPVGTVITDMDTGELIADLTEHGQQVMLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPSKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E V A I+ EL Y+ L K + L+++D V D + + Sbjct: 241 LLHLVDLAPFDEGVDPVAEATAIVGELRKYDEALYDKPRWLVLNKLDMVPDDEREARVAD 300 Query: 296 LATQCGQ--VPFEFSSITGHGIPQILECLHDKI 326 + G FE S++TG G + ++D + Sbjct: 301 FLERFGWDGPVFEISALTGQGCEALCYAIYDYL 333 >gi|116688607|ref|YP_834230.1| GTPase ObgE [Burkholderia cenocepacia HI2424] gi|170731906|ref|YP_001763853.1| GTPase ObgE [Burkholderia cenocepacia MC0-3] gi|254246400|ref|ZP_04939721.1| GTP-binding protein, HSR1-related [Burkholderia cenocepacia PC184] gi|261266696|sp|B1JVA1|OBG_BURCC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266697|sp|A0K4B0|OBG_BURCH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|116646696|gb|ABK07337.1| GTP1/OBG sub domain protein [Burkholderia cenocepacia HI2424] gi|124871176|gb|EAY62892.1| GTP-binding protein, HSR1-related [Burkholderia cenocepacia PC184] gi|169815148|gb|ACA89731.1| GTP-binding protein Obg/CgtA [Burkholderia cenocepacia MC0-3] Length = 370 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 157/333 (47%), Positives = 224/333 (67%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V+ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVYAIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+DV L +PVGT + + D LI DL + Q+++LA G Sbjct: 61 YAKKHLARNGENGRGSDCYGKGGDDVTLRMPVGTIISDMDTGELIADLTEHDQQVMLAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT V Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPSKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGV 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E+V A I+ EL Y+ L +K + L+++D V D + + Sbjct: 241 LLHLVDLAPFDESVDPVAEATAIVGELRKYDEALYEKPRWLVLNKLDMVPEDEREARVAD 300 Query: 296 LATQCGQ--VPFEFSSITGHGIPQILECLHDKI 326 + G FE S++TG G + ++D + Sbjct: 301 FLDRFGWDGPVFEISALTGQGCEALCYAIYDYL 333 >gi|221633685|ref|YP_002522911.1| putative GTPase [Thermomicrobium roseum DSM 5159] gi|261277725|sp|B9L101|OBG_THERP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|221155903|gb|ACM05030.1| putative GTPase of unknown function subfamily [Thermomicrobium roseum DSM 5159] Length = 467 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 144/335 (42%), Positives = 225/335 (67%), Gaps = 15/335 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F DEAK+++++G+GG G +SF REK+I GGPDGG GGRGG+V+++ +LNTL+ F YQ Sbjct: 2 FYDEAKIFVKAGNGGNGAVSFHREKYIPRGGPDGGDGGRGGNVYLRVDPSLNTLLPFSYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F+A+ G+ G N++G G D+ + VP GT V++E +++ DL + G+ +++A GG Sbjct: 62 RQFRAEDGQPGQGNNKNGRDGADLYIDVPPGTVVYDEATGAVLGDLLEPGEVLLVARGGF 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + + QAP +A G G+E+ + L+LKL+AD+G++GLPNAGKST LA+V+ A Sbjct: 122 GGRGNQHFATPSRQAPRFAEKGEPGEERWLRLELKLLADVGLVGLPNAGKSTLLAAVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE---FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +PKIADYPFTTL P LG+V +E F+LAD+PG+I A +GAG+G FL+H ERT + Sbjct: 182 RPKIADYPFTTLEPMLGVVSVPGREGGTFVLADLPGLIAGASRGAGLGHEFLRHVERTRL 241 Query: 240 LLHIVS---ALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT----LAR 291 L+H++ LE + + I EL+AY++ L K +IV ++++D ++ +AR Sbjct: 242 LIHVLDGSGGLEGRDPLEDFHTINAELAAYSASLAGKPQIVAVNKMDLPEAQANWPRIAR 301 Query: 292 KKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +EL G + S+ TG G+ +++ +++ Sbjct: 302 ALDEL----GYTAYPISAATGQGVGELIRATWERL 332 >gi|261378622|ref|ZP_05983195.1| Obg family GTPase CgtA [Neisseria cinerea ATCC 14685] gi|269144955|gb|EEZ71373.1| Obg family GTPase CgtA [Neisseria cinerea ATCC 14685] Length = 384 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 209/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|303271683|ref|XP_003055203.1| predicted protein [Micromonas pusilla CCMP1545] gi|226463177|gb|EEH60455.1| predicted protein [Micromonas pusilla CCMP1545] Length = 460 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 140/327 (42%), Positives = 211/327 (64%), Gaps = 5/327 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+ D AK+Y+++GDGG G ++FRRE F+ GGP GG+GG GG ++ +A S++N+L+ FR Sbjct: 1 MRCFDTAKIYVKAGDGGRGMVAFRREAFVAQGGPFGGNGGNGGAIYFEADSSINSLVGFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + H +A G G + G+ G D + VP GT V + +C++ G R ++ PG Sbjct: 61 KKVHHRADPGGNGGGKKMQGSIGADRTVLVPPGTIVRDAKTDRTLCEMFAHGHREMVLPG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FK++ N+AP A G G EK + L+LKL+AD+GIIG+PNAGKST LA+V+ Sbjct: 121 GRGGRGNASFKTAKNKAPQIAENGEEGMEKWVELELKLVADVGIIGVPNAGKSTLLANVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTT+ PNLG+V+ ++ + ADIPG+++ A G G+G FL+H +RT VL Sbjct: 181 NAKPKIADYPFTTIVPNLGVVERDFERMVFADIPGLLEGASDGVGLGFEFLRHVKRTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT-- 298 +H++ E+V Y I +EL ++ E+ K E++ L+++D SD A + EL T Sbjct: 241 VHVLDCTSEDVLEEYDAIRNELFLFDEEVGDKPELIALNKVDA--SDEAAERALELQTVF 298 Query: 299 -QCGQVPFEFSSITGHGIPQILECLHD 324 + G S++TG G+ +++ + D Sbjct: 299 EERGLNVHVTSALTGAGVGELITAVKD 325 >gi|283788178|ref|YP_003368043.1| GTP-binding protein [Citrobacter rodentium ICC168] gi|282951632|emb|CBG91332.1| probable GTP-binding protein [Citrobacter rodentium ICC168] Length = 390 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 144/306 (47%), Positives = 210/306 (68%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTMGTPGDKRDLLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEKSFVVADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D D K Sbjct: 241 LLHLIDIDPVDGSDPVENA-RIIIGELEKYSQDLASKPRWLVFNKIDLLDQDEAEEKAKA 299 Query: 296 LATQCG 301 +A G Sbjct: 300 IAQALG 305 >gi|300814052|ref|ZP_07094335.1| Obg family GTPase CgtA [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511709|gb|EFK38926.1| Obg family GTPase CgtA [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 421 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 146/324 (45%), Positives = 221/324 (68%), Gaps = 9/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+ +++G GG G +++RREK+ GGP GG GGRGGDV I+A L+TL+DFRY+ Sbjct: 2 FIDSAKIRLKAGRGGDGAVAWRREKYEPAGGPHGGDGGRGGDVIIKADEGLHTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KAQ+GE GM + + G GED++L VPVGT V +E+ +I D + ++ GG Sbjct: 62 REYKAQNGENGMNKLKYGKAGEDIILKVPVGTLVKDEETGGVIYDFKNKDDEFVICHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA +K+ST ++P +A G G+E+ + L+LKL+AD+G++G PN GKST L+ V++A Sbjct: 122 GGHGNAKYKTSTRRSPNFAQAGTKGEERSVILELKLLADVGLVGFPNVGKSTLLSQVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI++Y FTTL PNLG+V G +E F+LADIPG+I+ A QG G+GD FLKH ERT VL+ Sbjct: 182 RPKISNYHFTTLTPNLGLVSLGPEESFVLADIPGLIEGASQGIGLGDEFLKHIERTGVLI 241 Query: 242 HIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 H++ S + ++ Y+ I +EL YN +LR K +I+ ++ID S + L + K L Sbjct: 242 HVLDISGSENRDPLEDFYK-INEELYNYNEKLRDKTQIIFANKIDIPSSKENLEKLKKAL 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILE 320 +++ + E S+ TG + +++ Sbjct: 301 SSKYQII--EGSAATGENVKLLMQ 322 >gi|298369706|ref|ZP_06981023.1| Obg family GTPase CgtA [Neisseria sp. oral taxon 014 str. F0314] gi|298282263|gb|EFI23751.1| Obg family GTPase CgtA [Neisseria sp. oral taxon 014 str. F0314] Length = 383 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 209/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTHHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEETLAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|289662721|ref|ZP_06484302.1| GTPase ObgE [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289670402|ref|ZP_06491477.1| GTPase ObgE [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 350 Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 153/322 (47%), Positives = 208/322 (64%), Gaps = 9/322 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MK +DEA++ + +G+GG G + FRREKFI GGPDGG GG GG VWI A N+NTL+DFR Sbjct: 1 MKLVDEAEILVTAGNGGNGCVGFRREKFIPLGGPDGGDGGSGGSVWIVADENVNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ FKAQ GE GM R G GED ++ VPVGT V +I DL Q G R+++A G Sbjct: 61 HERTFKAQRGENGMGRQAYGKGGEDRIIVVPVGTVVMNVQTDEVIGDLTQHGDRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + G G+E+++ L+LKL+AD+G++G PNAGKST + +V+ Sbjct: 121 GKGGLGNMHFKSSVNRAPRQSTTGEEGEERLLKLELKLLADVGLLGFPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTLYPNLG+V E Y+ F++AD+PG+I+ A GAG+G +FL+H +RT + Sbjct: 181 SATPKVADYPFTTLYPNLGVVSVEAYRSFVIADVPGLIEGAADGAGLGTQFLRHLQRTRL 240 Query: 240 LLHIVSALE-----ENVQAAYQC--ILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 LLH+V E V A Q I EL ++ EL KK + L++ D + D Sbjct: 241 LLHLVDIAPMDGGVEGVSPAEQVRTIERELERHDPELLKKPRWLVLNKADLMFEDEARAA 300 Query: 293 KNELATQCG-QVPFEFSSITGH 313 + + G P+ S G Sbjct: 301 AETIVAELGWTAPWYLVSALGR 322 >gi|170725368|ref|YP_001759394.1| GTPase ObgE [Shewanella woodyi ATCC 51908] gi|261263090|sp|B1KGH1|OBG_SHEWM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|169810715|gb|ACA85299.1| GTP-binding protein Obg/CgtA [Shewanella woodyi ATCC 51908] Length = 389 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 141/297 (47%), Positives = 208/297 (70%), Gaps = 6/297 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG+G +SFRREK++ GGPDGG GG GG V++QA + NTLIDF+ Sbjct: 1 MKFVDEAVIRVEAGDGGSGCVSFRREKYVPDGGPDGGDGGDGGSVYLQADESYNTLIDFQ 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ +A+ G+ G R+ +G GED++LTVPVGT+ +E+ + DL + GQR+++A G Sbjct: 61 FERFHRAERGKNGRGRDCTGHGGEDLILTVPVGTRAIDEETQESLGDLTKHGQRMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSTNRAPRQKTLGTPGEVRSLKLELMLLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 RAKPK+ADYPFTTL PNLG+V + + F++ADIPG+I+ A GAG+G +FLKH ER V Sbjct: 181 RAKPKVADYPFTTLVPNLGVVNPRHGQSFVIADIPGLIEGAADGAGLGVQFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 LLHI+ + V++A + I+ EL ++ +L K + +++ D + D L + Sbjct: 241 LLHILDIDPIDGSDPVESA-RAIVAELEKHSPKLASKPRWLVINKTDLMLEDELKER 296 >gi|325127360|gb|EGC50295.1| GTP-binding protein Obg/CgtA [Neisseria meningitidis N1568] Length = 384 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 209/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGEARSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYDKPRWLVLNKLDMLDEE 292 >gi|261364074|ref|ZP_05976957.1| Obg family GTPase CgtA [Neisseria mucosa ATCC 25996] gi|288568118|gb|EFC89678.1| Obg family GTPase CgtA [Neisseria mucosa ATCC 25996] Length = 384 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 209/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYGKPRWLVLNKLDMIDEE 292 >gi|21672650|ref|NP_660717.1| GTPase ObgE [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25009591|sp|Q8K9G1|OBG_BUCAP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|21623286|gb|AAM67928.1| hypothetical 43.3 kd GTP-binding protein [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 333 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 143/289 (49%), Positives = 196/289 (67%), Gaps = 3/289 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D+ + + +G+GG G ++FRREK+I GGPDGG GG GG+VW+Q+ +NLNTLID R Sbjct: 1 MKFIDQTIIQVIAGNGGNGCVNFRREKYIPKGGPDGGDGGDGGNVWLQSDNNLNTLIDLR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A HGE G +N SG KG D+ + VPVGT++ +I DL + Q+I++A G Sbjct: 61 FKKTFQAPHGENGSGKNCSGKKGSDIKIYVPVGTKIINYQTREIIGDLIKHKQKILIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G +G+++ I L+L LIAD+G +G+PNAGKST + S++ Sbjct: 121 GWHGLGNTRFKSSINRTPRQRTLGSVGEKRDIQLELILIADVGTLGMPNAGKSTLVKSIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AK KIA+YPFTTL P LG V K+FI+ADIPGI++NA QG G+G RFLKH ER +L Sbjct: 181 GAKTKIANYPFTTLNPVLGSVNTEGKKFIIADIPGIMQNASQGFGLGVRFLKHLERCKIL 240 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 LHIV N + IL+EL YN+ L K + L++ID + S Sbjct: 241 LHIVDLCPTDHSNPVENIRIILNELKKYNTSLYNKPRWLILNKIDLIKS 289 >gi|326392110|ref|ZP_08213592.1| GTP-binding protein Obg/CgtA [Thermoanaerobacter ethanolicus JW 200] gi|325991848|gb|EGD50358.1| GTP-binding protein Obg/CgtA [Thermoanaerobacter ethanolicus JW 200] Length = 423 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 148/330 (44%), Positives = 215/330 (65%), Gaps = 3/330 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A++YI++GDGG G ISFRREK++ +GGPDGG GG+GGDV A NL+TL+DF+Y+ Sbjct: 2 FIDTARIYIKAGDGGNGIISFRREKYVAYGGPDGGDGGKGGDVIFVADPNLSTLLDFKYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + AQ+GE G +N+ G GED+ + VPVGT + ++ +I DL + Q+ I+ GG Sbjct: 62 KKYIAQNGENGRGKNQYGKNGEDLYIKVPVGTLIINDETGEIIADLVKPNQKAIVLRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F +ST + P +A G G+E + L+LKL+AD+G+IG PNAGKST LAS TRA Sbjct: 122 GGRGNTKFATSTLKTPRFAESGEKGKEMWVRLELKLLADVGLIGFPNAGKSTLLASCTRA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIA+YPFTTL PNLG+V+ K F++ADIPG+I+ AH+G G+G FL+H ERT +L+H Sbjct: 182 KPKIANYPFTTLTPNLGVVEYKGKSFVMADIPGLIEGAHRGEGLGHDFLRHIERTKMLIH 241 Query: 243 IVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 +V + ++ I +EL Y+ L +IV ++ID + + Sbjct: 242 VVDVSGNEGRDPIEDFEKINEELKLYSERLLTLPQIVAANKIDLQSGRENYPDFEKEIKK 301 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSI 329 G + S++T GI ++L+ + + SI Sbjct: 302 RGYDVYPISALTKEGIDKLLDKTIEILSSI 331 >gi|27904840|ref|NP_777966.1| GTPase ObgE [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|41018466|sp|Q89AE7|OBG_BUCBP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|27904238|gb|AAO27071.1| GTP-binding protein [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 338 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 147/330 (44%), Positives = 217/330 (65%), Gaps = 6/330 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+A +++ +G+GG G SFRREK+I GGPDGG GG GG+VW+Q +NLNTLIDF+ Sbjct: 1 MKFLDKAIIHVIAGNGGHGRTSFRREKYIPKGGPDGGDGGNGGNVWLQTVTNLNTLIDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + FKAQ G++G + ++G KG D+V+ +P+GT++ + + +I D+ Q+ Q +++A G Sbjct: 61 FTKIFKAQDGQQGFNKKKTGKKGSDIVIQIPIGTKIIDHNTNEIIEDMIQDKQLVLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+ P G G+ +I+ L+L LIA +G +GLPN+GKST + +++ Sbjct: 121 GWHGLGNTRFKSSTNRIPIKHTKGTQGEFRILRLELILIAHVGTLGLPNSGKSTLVRNIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AK KIA+YPFTTL P LG VK +KE F++ADIPG+I+ A G G+G +FLKH ER H+ Sbjct: 181 NAKTKIANYPFTTLKPVLGTVKINHKEFFVIADIPGLIQGASHGIGLGYQFLKHLERCHL 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHI+ + +N ILDEL YN L K ++ID +D + K + Sbjct: 241 LLHIIDISQINFKNTITNIHVILDELKTYNKILHNKPIWFVFNKIDLIDDIDINTKLKSI 300 Query: 297 ATQCGQVP--FEFSSITGHGIPQILECLHD 324 + G + F S+I G+ +I++ ++D Sbjct: 301 LEKLGSIQQYFLISAIKKTGLKKIVKKIYD 330 >gi|83589425|ref|YP_429434.1| GTPase ObgE [Moorella thermoacetica ATCC 39073] gi|123524958|sp|Q2RKZ8|OBG_MOOTA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|83572339|gb|ABC18891.1| Small GTP-binding protein domain [Moorella thermoacetica ATCC 39073] Length = 423 Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 149/320 (46%), Positives = 223/320 (69%), Gaps = 4/320 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F DEAK+Y++ GDGG G ++FRREK++ GGP+GG GGRGG V ++A + L TL+DFRY+ Sbjct: 2 FYDEAKIYVKGGDGGNGIVAFRREKYVPRGGPNGGDGGRGGSVILEADAGLRTLVDFRYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H++A+ G+ G +N+ G D++L VPVG V + ++ DL ++GQR+++A GG Sbjct: 62 AHYRAERGQHGQGKNKHGRSAPDLILRVPVGVVVRDATSGQVLADLVEDGQRVVVAAGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F +ST++AP +A G G+E+ + L+LKL+AD+G+IGLPNAGKST LA ++ A Sbjct: 122 GGRGNARFVTSTDRAPTFAEKGEPGEERWLVLELKLLADVGLIGLPNAGKSTLLARISAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADYPFTTL PNLG+V+ E F++ADIPG+I AHQGAG+G +FL+H ERT VL+ Sbjct: 182 RPKIADYPFTTLTPNLGVVRLEDGDSFVVADIPGLIAGAHQGAGLGLKFLRHIERTRVLV 241 Query: 242 HIVSALE--ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 H++ + E+V A ++ + DEL+ YN EL ++ ++V +++D + E Sbjct: 242 HVLDTSQPGEDVLAGWRTVNDELAHYNPELARRPQVVAANKMDIPGGEEKVAFLRERLGD 301 Query: 300 CGQVPFEFSSITGHGIPQIL 319 ++ F S+ TG G+ ++L Sbjct: 302 SYRI-FPISAATGEGVQELL 320 >gi|189467972|ref|ZP_03016757.1| hypothetical protein BACINT_04366 [Bacteroides intestinalis DSM 17393] gi|189436236|gb|EDV05221.1| hypothetical protein BACINT_04366 [Bacteroides intestinalis DSM 17393] Length = 390 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 151/326 (46%), Positives = 210/326 (64%), Gaps = 5/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+I GGPDGG GGRGG + ++ N TL+ RY Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYIPNGGPDGGDGGRGGHIILRGNRNYWTLLHLRYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G GED ++ VP GT V+ + ICD+ + GQ ++L GG Sbjct: 66 RHALAGHGESGSKNRSFGKDGEDKIIEVPCGTVVYNAETGEYICDVTEHGQEVVLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + ++LKL+AD+G++G PNAGKST LASV+ A Sbjct: 126 GGLGNWHFKTATRQAPRFAQPGEPMQEMTVIMELKLLADVGLVGFPNAGKSTLLASVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTTL PNLGIV K F++ADIPGII+ A G G+G RFL+H ER +LL Sbjct: 186 KPKIANYPFTTLEPNLGIVSYRDSKSFVMADIPGIIEGASAGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V A ++++ Y+ +L+ELS +N E+ K ++ +++ D +D + + + T Sbjct: 246 FMVPADSDDIRKEYEILLNELSTFNPEMLDKQRVLAITKSDMLDQELMDEIE---PTLPA 302 Query: 302 QVPFEF-SSITGHGIPQILECLHDKI 326 VP F SSITG G+ + + L +++ Sbjct: 303 NVPHVFISSITGMGLSVLKDILWEEL 328 >gi|229845928|ref|ZP_04466040.1| GTPase ObgE [Haemophilus influenzae 7P49H1] gi|229810932|gb|EEP46649.1| GTPase ObgE [Haemophilus influenzae 7P49H1] Length = 403 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 153/340 (45%), Positives = 216/340 (63%), Gaps = 6/340 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE+ + I +GDGG G +SFRREKFI GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFIDESLIRIEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A+ GE G + +G +G+D++L VPVGT+ + D + DL Q GQ++++A G Sbjct: 61 FNKRFAAERGENGRSSDCTGRRGKDIILPVPVGTRAIDNDTKETLGDLTQHGQKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++G PNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLLLELMLLADVGMLGFPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDDSHSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V N I EL Y+ +L +K + ++IDT+ + E+ Sbjct: 241 LIHLVDIAPIDGSNPADNVAIIESELFQYSEKLSEKPRWLVFNKIDTMSDEEAEELVREI 300 Query: 297 ATQCGQVP--FEFSSITGHGIPQILECLHDKIFSIRGENE 334 Q G + S+ TG +P + + D I + E E Sbjct: 301 TEQLGWEEGYYLISAATGKNVPPLCRDIMDFIIANPREAE 340 >gi|304388717|ref|ZP_07370775.1| obg family GTPase CgtA [Neisseria meningitidis ATCC 13091] gi|304337281|gb|EFM03457.1| obg family GTPase CgtA [Neisseria meningitidis ATCC 13091] Length = 384 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 142/292 (48%), Positives = 209/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +P+GT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPIGTLIRDLDTDEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYDKPRWLVLNKLDMLDEE 292 >gi|261393410|emb|CAX51046.1| putative GTP-binding protein [Neisseria meningitidis 8013] Length = 384 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 209/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGEARSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|328955458|ref|YP_004372791.1| GTP-binding protein Obg/CgtA [Coriobacterium glomerans PW2] gi|328455782|gb|AEB06976.1| GTP-binding protein Obg/CgtA [Coriobacterium glomerans PW2] Length = 490 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 142/340 (41%), Positives = 218/340 (64%), Gaps = 9/340 (2%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F D +++ +R GDGGAG +SFRRE F+ GGPDGG GG GG V IQA + L++LID+R+ Sbjct: 3 QFTDLSRINVRGGDGGAGCMSFRREAFVPKGGPDGGDGGNGGSVIIQADAQLSSLIDYRF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISL-----ICDLDQEGQRII 116 + HF+A+ G G + G GED+VL VPVGT V E D ++ + DL ++G+R++ Sbjct: 63 KHHFRAERGTHGQGARKHGRNGEDLVLRVPVGTIVRELDPQTMEPALDLADLTRDGERVV 122 Query: 117 LAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFL 176 +APGG GG GN HF +S +AP +A G + I L++KL+AD ++G+P+ GKS+ + Sbjct: 123 VAPGGTGGLGNTHFVTSVRRAPAFAQLGEPVDDHWIELEMKLMADAALVGMPSVGKSSLI 182 Query: 177 ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTER 236 A ++ A+PKIADYPFTTL PNLG+V+ G +++AD+PG+I+ A +G G+GD+FL+H ER Sbjct: 183 AHMSAARPKIADYPFTTLVPNLGMVRAGEYSYVVADVPGLIEGASEGRGLGDQFLRHIER 242 Query: 237 THVLLHIVS---ALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 T +++H+V LE + Y+ I +EL+ Y SEL ++ +IV ++ D + Sbjct: 243 TALIMHVVDISGGLEGRDPVEDYRIINEELARYASELARRPQIVVANKCDASGMSERIER 302 Query: 293 KNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 A G+ F S+ TG + ++ ++I +R E Sbjct: 303 LKMAALADGRRFFAVSAATGANLSTLMLACGEEIQKLRRE 342 >gi|312170890|emb|CBX79149.1| Uncharacterized GTP-binding protein BU389 [Erwinia amylovora ATCC BAA-2158] Length = 392 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 137/305 (44%), Positives = 206/305 (67%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPRGGPDGGDGGDGGDVYMQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G D+++ VPVGT++ ++ + D+ Q++++A G Sbjct: 61 FEKSFRAERGQNGQNRDCTGKRGNDILIKVPVGTRIIDQGTGETLGDMTHHQQKMMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTMGTPGEKRDLQLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEQSFVVADIPGLIEGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH + E + + IL EL Y+ +L +K + +++D +D + + + Sbjct: 241 LLHTIDLAPIDESDPVENARIILGELEKYSDKLFQKPRWLVFNKVDLLDEEEAESRAKAI 300 Query: 297 ATQCG 301 A G Sbjct: 301 AEALG 305 >gi|325205034|gb|ADZ00488.1| GTP-binding protein Obg/CgtA [Neisseria meningitidis M01-240355] Length = 384 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 209/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGEARSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|292486822|ref|YP_003529692.1| GTP-binding protein [Erwinia amylovora CFBP1430] gi|292900779|ref|YP_003540148.1| GTP-binding protein [Erwinia amylovora ATCC 49946] gi|291200627|emb|CBJ47759.1| probable GTP-binding protein [Erwinia amylovora ATCC 49946] gi|291552239|emb|CBA19276.1| Uncharacterized GTP-binding protein BU389 [Erwinia amylovora CFBP1430] Length = 392 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 137/305 (44%), Positives = 206/305 (67%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPRGGPDGGDGGDGGDVYMQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G D+++ VPVGT++ ++ + D+ Q++++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGNDILIKVPVGTRIIDQGTGETLGDMTHHQQKMMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTMGTPGEKRDLQLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEQSFVVADIPGLIEGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH + E + + IL EL Y+ +L +K + +++D +D + + + Sbjct: 241 LLHTIDLAPIDESDPVENARIILGELEKYSDKLFQKPRWLVFNKVDLLDEEEAESRAKAI 300 Query: 297 ATQCG 301 A G Sbjct: 301 AEALG 305 >gi|239618481|ref|YP_002941803.1| GTP-binding protein Obg/CgtA [Kosmotoga olearia TBF 19.5.1] gi|239507312|gb|ACR80799.1| GTP-binding protein Obg/CgtA [Kosmotoga olearia TBF 19.5.1] Length = 437 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 146/328 (44%), Positives = 218/328 (66%), Gaps = 4/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 +D K+++++G GG G +SFRREK+I FGGPDGG GG GG+V+I+AT++ NTL++F+ + Sbjct: 8 LVDTGKIFVKAGKGGDGAVSFRREKYIPFGGPDGGDGGNGGNVFIRATTSKNTLLEFQSK 67 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F+A+ GE G + G KG+DV++ VPVGT V++ + L+ DL G + +A GG Sbjct: 68 KKFEAEDGENGSGGKKYGKKGKDVIIEVPVGTLVYDAETGELLADLSSPGDIVCVARGGK 127 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +S NQAP A G G+E+ I+L+LKL+AD+G+IG PN GKST ++ ++ + Sbjct: 128 GGRGNVHFATSVNQAPRVAEAGEPGEERKIYLELKLLADVGLIGFPNTGKSTIISKISNS 187 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+VK + FI+AD+PG++K AH+GAG+G FLKH ER ++L+ Sbjct: 188 KPKIANYHFTTLVPNLGVVKLSPEHGFIVADVPGLVKGAHKGAGLGHNFLKHVERCYLLV 247 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ E + Y I EL +N EL KK EIV ++ID + + + ++ Sbjct: 248 HVLDIAETEDRDFIQDYYDIRKELELHNEELAKKPEIVVGNKIDVLSDEEIEKRVKRFYD 307 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKI 326 Q G+ S+I G I ++ + +KI Sbjct: 308 QTGKKILPISAIQGRNIDKLKWEMWEKI 335 >gi|118595228|ref|ZP_01552575.1| GTPase involved in cell partioning and DNA repair [Methylophilales bacterium HTCC2181] gi|118441006|gb|EAV47633.1| GTPase involved in cell partioning and DNA repair [Methylophilales bacterium HTCC2181] Length = 338 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 143/324 (44%), Positives = 219/324 (67%), Gaps = 7/324 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G SFRREK+ GGP+GG GGRGG + +++ N+NTL+DFR Sbjct: 1 MKFIDEATIRVFAGDGGNGIASFRREKYEPMGGPNGGDGGRGGSIHVESDENINTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + ++++A+ GE G GAKG D++L VPVGT + E+ ++ D + G+R I+A G Sbjct: 61 FVKNYRAKRGENGRSAECYGAKGADLILRVPVGTVITEKQSGEVLADFEIHGERRIIANG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+E ++L+LK++AD+G++G+PNAGKS+ + S++ Sbjct: 121 GKGGLGNVHFKSSTNRAPRQCTQGEPGEEFELYLELKVLADVGLLGMPNAGKSSLIRSIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V+ + + F++ADIPG+I+ A G G+G +FL+H +RT + Sbjct: 181 AAKPKVADYPFTTLQPNLGVVRVDNERSFVVADIPGLIEGAADGHGLGHQFLRHLDRTKL 240 Query: 240 LLHI--VSALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQID-TVDSDTLARKKN 294 LLH+ ++ +E+V A + I++EL Y+ +L K + L++ID T D + + Sbjct: 241 LLHLIDIAPFDESVDPAKEADAIVNELKKYSMDLFNKPRWLVLNKIDLTSKVDQIQNEIK 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQI 318 G++ F S+I G G ++ Sbjct: 301 NKMQWSGKI-FCISAINGKGCREL 323 >gi|89900064|ref|YP_522535.1| GTPase ObgE [Rhodoferax ferrireducens T118] gi|122479649|sp|Q21YZ9|OBG_RHOFD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|89344801|gb|ABD69004.1| Small GTP-binding protein domain [Rhodoferax ferrireducens T118] Length = 355 Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 143/334 (42%), Positives = 225/334 (67%), Gaps = 9/334 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGGAG +SFR EK+ EFGGP+GG GGRGG V+ A NLNTL+DFR Sbjct: 1 MKFVDEAYIDVSAGDGGAGCVSFRHEKYKEFGGPNGGDGGRGGHVFAVADPNLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + A+ GE GM + GA G+D+ L +PVGT + + + ++ +L G+ I +A G Sbjct: 61 FSRRHDAKRGEHGMGSDMFGAAGDDITLKMPVGTIISDAETGEVLFELLTPGEVITIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKS+ N+AP PG G+++ + L+LK++AD+G++G+PNAGKST +++++ Sbjct: 121 GDGGFGNLRFKSAINRAPRQKTPGWPGEKRNLKLELKVLADVGLLGMPNAGKSTLISAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P+IADYPFTTL+PNLG+V+ G ++ F++AD+PG+I+ A +GAG+G FL+H +RT + Sbjct: 181 NARPRIADYPFTTLHPNLGVVRVGPEQSFVVADLPGLIEGASEGAGLGHLFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVD---SDTLARK 292 LLH+V + +E V Q I++EL Y+ L K + L+++D V + L + Sbjct: 241 LLHVVDMAPFDEGVDTVAQAKAIVNELKKYDPALYNKPRWLVLNKLDMVPLEHREALVKD 300 Query: 293 KNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + G V F+ S++T G +++ ++ + Sbjct: 301 FVKRFKFKGPV-FQISALTREGCESLIKIIYQHV 333 >gi|261379504|ref|ZP_05984077.1| Obg family GTPase CgtA [Neisseria subflava NJ9703] gi|284797967|gb|EFC53314.1| Obg family GTPase CgtA [Neisseria subflava NJ9703] Length = 384 Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 209/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|240114657|ref|ZP_04728719.1| GTPase ObgE [Neisseria gonorrhoeae PID18] gi|260441537|ref|ZP_05795353.1| GTPase ObgE [Neisseria gonorrhoeae DGI2] gi|268600303|ref|ZP_06134470.1| GTPase ObgE [Neisseria gonorrhoeae PID18] gi|291044898|ref|ZP_06570607.1| GTPase ObgE [Neisseria gonorrhoeae DGI2] gi|268584434|gb|EEZ49110.1| GTPase ObgE [Neisseria gonorrhoeae PID18] gi|291011792|gb|EFE03788.1| GTPase ObgE [Neisseria gonorrhoeae DGI2] Length = 384 Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 209/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|59802298|ref|YP_209010.1| GTPase ObgE [Neisseria gonorrhoeae FA 1090] gi|194099740|ref|YP_002002875.1| GTPase ObgE [Neisseria gonorrhoeae NCCP11945] gi|239999929|ref|ZP_04719853.1| GTPase ObgE [Neisseria gonorrhoeae 35/02] gi|240013124|ref|ZP_04720037.1| GTPase ObgE [Neisseria gonorrhoeae DGI18] gi|240015567|ref|ZP_04722107.1| GTPase ObgE [Neisseria gonorrhoeae FA6140] gi|240081826|ref|ZP_04726369.1| GTPase ObgE [Neisseria gonorrhoeae FA19] gi|240114104|ref|ZP_04728594.1| GTPase ObgE [Neisseria gonorrhoeae MS11] gi|240116858|ref|ZP_04730920.1| GTPase ObgE [Neisseria gonorrhoeae PID1] gi|240120195|ref|ZP_04733157.1| GTPase ObgE [Neisseria gonorrhoeae PID24-1] gi|240122492|ref|ZP_04735448.1| GTPase ObgE [Neisseria gonorrhoeae PID332] gi|240126659|ref|ZP_04739545.1| GTPase ObgE [Neisseria gonorrhoeae SK-92-679] gi|240127203|ref|ZP_04739864.1| GTPase ObgE [Neisseria gonorrhoeae SK-93-1035] gi|254492717|ref|ZP_05105888.1| GTPase ObgE [Neisseria gonorrhoeae 1291] gi|268595735|ref|ZP_06129902.1| GTPase ObgE [Neisseria gonorrhoeae 35/02] gi|268597922|ref|ZP_06132089.1| GTPase ObgE [Neisseria gonorrhoeae FA19] gi|268600172|ref|ZP_06134339.1| GTPase ObgE [Neisseria gonorrhoeae MS11] gi|268602535|ref|ZP_06136702.1| GTPase ObgE [Neisseria gonorrhoeae PID1] gi|268681084|ref|ZP_06147946.1| GTPase ObgE [Neisseria gonorrhoeae PID332] gi|268685238|ref|ZP_06152100.1| GTPase ObgE [Neisseria gonorrhoeae SK-92-679] gi|268685564|ref|ZP_06152426.1| GTPase ObgE [Neisseria gonorrhoeae SK-93-1035] gi|293397973|ref|ZP_06642179.1| obg family GTPase CgtA [Neisseria gonorrhoeae F62] gi|75432337|sp|Q5F5D9|OBG_NEIG1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277701|sp|B4RQP4|OBG_NEIG2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|59719193|gb|AAW90598.1| putative GTP-binding protein [Neisseria gonorrhoeae FA 1090] gi|193935030|gb|ACF30854.1| putative GTP-binding protein [Neisseria gonorrhoeae NCCP11945] gi|226511757|gb|EEH61102.1| GTPase ObgE [Neisseria gonorrhoeae 1291] gi|268549124|gb|EEZ44542.1| GTPase ObgE [Neisseria gonorrhoeae 35/02] gi|268551710|gb|EEZ46729.1| GTPase ObgE [Neisseria gonorrhoeae FA19] gi|268584303|gb|EEZ48979.1| GTPase ObgE [Neisseria gonorrhoeae MS11] gi|268586666|gb|EEZ51342.1| GTPase ObgE [Neisseria gonorrhoeae PID1] gi|268621368|gb|EEZ53768.1| GTPase ObgE [Neisseria gonorrhoeae PID332] gi|268625522|gb|EEZ57922.1| GTPase ObgE [Neisseria gonorrhoeae SK-92-679] gi|268625848|gb|EEZ58248.1| GTPase ObgE [Neisseria gonorrhoeae SK-93-1035] gi|291611919|gb|EFF40988.1| obg family GTPase CgtA [Neisseria gonorrhoeae F62] gi|317165227|gb|ADV08768.1| GTPase ObgE [Neisseria gonorrhoeae TCDC-NG08107] Length = 384 Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 209/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|259907029|ref|YP_002647385.1| GTPase ObgE [Erwinia pyrifoliae Ep1/96] gi|224962651|emb|CAX54106.1| GTP-binding protein [Erwinia pyrifoliae Ep1/96] gi|283476825|emb|CAY72663.1| Uncharacterized GTP-binding protein BU389 [Erwinia pyrifoliae DSM 12163] gi|310766242|gb|ADP11192.1| GTPase ObgE [Erwinia sp. Ejp617] Length = 392 Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 137/305 (44%), Positives = 206/305 (67%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPRGGPDGGDGGDGGDVYMQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G D+++ VPVGT++ ++ + D+ Q++++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGNDILIKVPVGTRIIDQGTGETLGDMTHHQQKMMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTMGTPGEKRDLQLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEQSFVVADIPGLIEGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH + E + + IL EL Y+ +L +K + +++D +D + + + Sbjct: 241 LLHTIDLAPIDESDPVENARIILGELEKYSDKLFQKPRWLVFNKVDLLDEEEAESRAKTI 300 Query: 297 ATQCG 301 A G Sbjct: 301 AQALG 305 >gi|121635741|ref|YP_975986.1| GTPase ObgE [Neisseria meningitidis FAM18] gi|261277704|sp|A1KWG2|OBG_NEIMF RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|120867447|emb|CAM11219.1| putative GTP-binding protein [Neisseria meningitidis FAM18] gi|325131326|gb|EGC54037.1| GTP-binding protein Obg/CgtA [Neisseria meningitidis M6190] gi|325137355|gb|EGC59943.1| GTP-binding protein Obg/CgtA [Neisseria meningitidis ES14902] gi|325199174|gb|ADY94630.1| GTP-binding protein Obg/CgtA [Neisseria meningitidis G2136] gi|325208935|gb|ADZ04387.1| GTP-binding protein Obg/CgtA [Neisseria meningitidis NZ-05/33] Length = 384 Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 209/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGEARSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|319409606|emb|CBY89905.1| putative GTP-binding protein [Neisseria meningitidis WUE 2594] Length = 384 Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 209/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGEARSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|313676036|ref|YP_004054032.1| GTP-binding protein obg/cgta [Marivirga tractuosa DSM 4126] gi|312942734|gb|ADR21924.1| GTP-binding protein Obg/CgtA [Marivirga tractuosa DSM 4126] Length = 330 Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 141/321 (43%), Positives = 212/321 (66%), Gaps = 3/321 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K RSG GGAG +S RREK + GGPDGG+GGRGG++ ++ ++ L TL+ +Y+ Sbjct: 6 FIDYVKFCSRSGKGGAGAVSMRREKHVPKGGPDGGNGGRGGNIILKGSTQLWTLLHLKYK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A GE G SGA G+D++L VP+GT + + + ++ +EG+ IL GG Sbjct: 66 KHVIADGGENGSGARSSGADGKDIILEVPLGTVAKDAETGEIRFEITEEGEEKILTEGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA+FK++TNQ P YA PG G+E+ I L+LKL+AD+G++G PNAGKST L+ V+ A Sbjct: 126 GGLGNANFKTATNQTPRYAQPGEDGKEEWIILELKLLADVGLVGFPNAGKSTLLSVVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IADY FTTL PNLG++ ++ F++ADIPGII+ A G G+G RFL+H ER +LL Sbjct: 186 KPEIADYAFTTLTPNLGVIPYRDHRSFVMADIPGIIEGAAAGKGLGTRFLRHIERNSILL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A ++V+ YQ +++EL YN EL K ++ +++ D +D + + K EL Sbjct: 246 FMIPADSKDVKKEYQILINELKEYNPELLDKNRLLAITKSDLLDEELMQELKKELPNDLQ 305 Query: 302 QVPFEFSSITGHGIPQILECL 322 + SS+T + I ++ + + Sbjct: 306 HI--FISSLTQYNINELKDMI 324 >gi|209527847|ref|ZP_03276337.1| GTP-binding protein Obg/CgtA [Arthrospira maxima CS-328] gi|209491704|gb|EDZ92069.1| GTP-binding protein Obg/CgtA [Arthrospira maxima CS-328] Length = 336 Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 143/324 (44%), Positives = 219/324 (67%), Gaps = 5/324 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D ++ + +G GG G ++FRREK++ GGP GG+GGRGG V ++A +L TL+DF+ Sbjct: 1 MQFIDRTEIEVEAGKGGDGIVAFRREKYVPAGGPAGGNGGRGGSVILKAVEDLQTLLDFQ 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + FKA G++G +N++GA G D ++ VP GT V++ + + L+ DL Q +A G Sbjct: 61 YNRRFKADDGKRGGPKNKTGASGSDRIIEVPCGTVVYDANTLELMVDLVTPNQEFCVAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN+HF S+ N+AP YA PG+ G+ + + L+LKL+A++GIIGLPNAGKST +++V+ Sbjct: 121 GKGGLGNSHFLSNQNRAPDYALPGLPGESRRLRLELKLLAEVGIIGLPNAGKSTLISAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V++ + + ADIPG+I+ AH+G G+G FL+H ERT + Sbjct: 181 SARPKVADYPFTTLIPNLGVVRKPTGDGTVFADIPGLIEGAHRGTGLGHEFLRHIERTRI 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK---NEL 296 LLH++ + + A YQ I EL AY L ++ +I+ L++ID D+ R K ++L Sbjct: 241 LLHMIDITDTDPIANYQIIQQELIAYGRGLERRRQILALNKIDAA-GDSEERSKAIASQL 299 Query: 297 ATQCGQVPFEFSSITGHGIPQILE 320 G F S++ G+ +L+ Sbjct: 300 EAIAGVRVFLISAVARIGLEALLQ 323 >gi|327398457|ref|YP_004339326.1| GTPase obg [Hippea maritima DSM 10411] gi|327181086|gb|AEA33267.1| GTPase obg [Hippea maritima DSM 10411] Length = 322 Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 145/284 (51%), Positives = 210/284 (73%), Gaps = 2/284 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A++++++GDGG G +SFRREK++ GGPDGG GGRGGDV ++A+ + NTL FR++ Sbjct: 2 FIDYARIHVKAGDGGRGIVSFRREKYVPKGGPDGGDGGRGGDVILKASKDENTLRSFRFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A++G+ G N++G G+D+++TVPVGT V +E+ ++I DL+Q+GQ +++A GG Sbjct: 62 KRFTAENGQPGGSNNKTGRSGKDLIITVPVGTIVKDEED-NIIADLNQDGQTVVIAKGGK 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F S TN+AP A PG G+EK I L+LKL+AD+G++G PNAGKS+ + +V+ A Sbjct: 121 GGKGNAAFASPTNRAPRVAKPGKPGEEKDIVLELKLLADVGLVGFPNAGKSSLIRAVSDA 180 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KP+IA+YPFTTL P+LG V K+FI+ADIPGII+ AH+G G+G RFLKH ERT +LL Sbjct: 181 KPEIANYPFTTLQPHLGYVFFDDKDFIIADIPGIIEGAHKGKGLGLRFLKHIERTAILLF 240 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 ++ +E + Y+ +L EL YN EL K+ + L++ID D Sbjct: 241 VLDITDEP-KEKYEKLLKELKEYNPELLKRKRAIALNKIDLFDK 283 >gi|332184831|gb|AEE27085.1| GTP-binding protein Obg [Francisella cf. novicida 3523] Length = 334 Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 141/304 (46%), Positives = 200/304 (65%), Gaps = 4/304 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE + +++G GG G +SFRREK++ GGPDGG GG GG ++++A N+NTLID+R Sbjct: 1 MRFVDEVVIKLQAGKGGNGCVSFRREKYVPRGGPDGGDGGNGGSIYLKADENVNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ + A++G G RN G GED+ L VPVGT VF+ + I ++ G+ + L G Sbjct: 61 YKREYYAENGRPGEGRNCYGKAGEDMYLIVPVGTSVFDIETNKKIGEVLTSGETLKLVSG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN HFKSSTNQAP G G+ K + L+L L+ADI ++GLPNAGKST + SV+ Sbjct: 121 GKRGIGNTHFKSSTNQAPRKFTLGEEGEYKEVRLELNLLADIALLGLPNAGKSTLIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PK+ADYPFTT+YP+LG+VK G F++ADIPG+I+ A +GAG+G RFLKH R + Sbjct: 181 EATPKVADYPFTTMYPHLGVVKVGVDSFVMADIPGVIEGAAEGAGLGLRFLKHLTRARCV 240 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH+V E + Y + EL Y+ EL +K + +++ID + +D + +K E Sbjct: 241 LHVVDICPFNESDPVENYFAVEKELKKYSKELYEKPRFLVINKIDLL-ADKVEQKCQEFV 299 Query: 298 TQCG 301 Q G Sbjct: 300 EQIG 303 >gi|300309707|ref|YP_003773799.1| GTPase [Herbaspirillum seropedicae SmR1] gi|300072492|gb|ADJ61891.1| GTPase protein [Herbaspirillum seropedicae SmR1] Length = 369 Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 148/339 (43%), Positives = 218/339 (64%), Gaps = 7/339 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G SF REKF FGGPDGG GG+GG +W A N+NTLID+R Sbjct: 1 MKFIDEARIEVVAGDGGNGVASFCREKFRPFGGPDGGDGGKGGTIWAVADRNVNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A GE G + G +DV L +PVGT + + + I DL GQ ++LA G Sbjct: 61 YAKLHRAGRGENGRGSDCYGKGADDVYLRMPVGTLIVDINTGEHIADLTFHGQTVMLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HFK+STN+AP G G+ + + L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GEGGWGNIHFKTSTNRAPRQKTEGKEGERRELRLELKVLADVGLLGMPNAGKSTFITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ + K F++ADIPG+I+ A GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVSHEKSFVIADIPGLIEGAADGAGLGVQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV + E V + I+ EL Y+ L K + L+++D V A++ + Sbjct: 241 LLHIVDLAPFNEEVDPVKEAKAIVQELKKYDQSLFDKPRWLVLNKLDVVPEAERAKRVKD 300 Query: 296 LATQCGQ--VPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + G FE S++ G +++ ++ + + R E Sbjct: 301 FVKRFGWKGPVFEISALNRDGCEELINEIYKYLETKRAE 339 >gi|323936123|gb|EGB32417.1| obg family protein GTPase CgtA [Escherichia coli E1520] Length = 390 Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 144/306 (47%), Positives = 209/306 (68%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ E V+ A + I+ EL Y+ +L K + ++ID +D K Sbjct: 241 LLHLIDIDPIDGTEPVENA-RIIISELEKYSQDLAAKPRWLVFNKIDLLDKVEAEEKAKA 299 Query: 296 LATQCG 301 +A G Sbjct: 300 IAEALG 305 >gi|19881018|gb|AAM00642.1| essential conserved GTPase [Legionella pneumophila] Length = 254 Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 129/245 (52%), Positives = 183/245 (74%), Gaps = 1/245 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G +SFRREKFI GGPDGG GG GG ++ +A+S+LNTLIDFR Sbjct: 1 MKFVDEALIKVEAGKGGNGCLSFRREKFIPRGGPDGGDGGDGGSIYFEASSDLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +KA++G+ GM N +G KG+D+ + VPVGT V++ D L+ D+ Q G +++A G Sbjct: 61 YTRQYKAENGQSGMGGNCTGKKGDDLTIKVPVGTMVYDADTGELLADISQPGIPVLIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN +KSS N++P PG G+ + + L+L+++AD+G++GLPNAGKST + +V+ Sbjct: 121 GFHGLGNTRYKSSVNRSPRQTTPGSPGESRNLRLELRVLADVGLLGLPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +K K+ADYPFTTL+P LG+V+ YK F++ADIPG+I+ A QGAG+G RFLKH RT V Sbjct: 181 SSKAKVADYPFTTLHPGLGVVRVSPYKSFVMADIPGLIEGAAQGAGLGHRFLKHLSRTCV 240 Query: 240 LLHIV 244 LLH++ Sbjct: 241 LLHVI 245 >gi|227879075|ref|ZP_03996964.1| GTP-binding protein [Lactobacillus crispatus JV-V01] gi|227861316|gb|EEJ68946.1| GTP-binding protein [Lactobacillus crispatus JV-V01] Length = 434 Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 146/324 (45%), Positives = 214/324 (66%), Gaps = 8/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EK++ GGP GG GGRGG + A S L TL+DFRY+ Sbjct: 4 FVDQTKIEVQAGKGGDGMVAFRHEKYVSNGGPAGGDGGRGGSIIFVADSGLRTLMDFRYR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA GE G +++ G +D+ L VPVGT V++ D LI DL ++GQ +++A GG Sbjct: 64 RKFKADSGENGRIKSQYGRAAKDLYLKVPVGTTVYDYDTNELIGDLTEKGQELVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +S N AP A G G+++++ L+LKL+AD+G++G P+ GKST L+ T+A Sbjct: 124 GGRGNIHFATSVNTAPEIAENGEPGEDRVLRLELKLLADVGLVGFPSVGKSTLLSVTTKA 183 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+I+ A QG G+G +FL+H ERT V+ Sbjct: 184 KPKIAAYQFTTLTPNLGMVILPDG-RDFSMADLPGLIEGASQGVGLGIQFLRHVERTKVI 242 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 LH+VS N + A Y I EL Y ++L KK E++ SQ+D + + LA K L Sbjct: 243 LHLVSMDPNNGREAIDDYHTIKKELKNYETDLSKKRELIVASQMDIPGAEEKLAEFKKAL 302 Query: 297 ATQCGQVP-FEFSSITGHGIPQIL 319 + P +E SS+T G+ +++ Sbjct: 303 KAEGNNEPIYEISSVTHKGVDKLM 326 >gi|256822889|ref|YP_003146852.1| GTP-binding protein Obg/CgtA [Kangiella koreensis DSM 16069] gi|256796428|gb|ACV27084.1| GTP-binding protein Obg/CgtA [Kangiella koreensis DSM 16069] Length = 424 Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 145/335 (43%), Positives = 222/335 (66%), Gaps = 12/335 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +++GDGG G +SFRREK++ GGPDGG GG GG+V+I A + LNTL+D+R Sbjct: 1 MKFVDEVSIKVKAGDGGNGIVSFRREKYVARGGPDGGDGGNGGNVYIVADAELNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A GE G RN++G+KGE++ L PVGTQ+ +++ ++ DL ++GQ +++A G Sbjct: 61 FVRFYQATRGENGQGRNKTGSKGEELYLKAPVGTQITDKETGEVVGDLVRDGQAVLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP A G G+ + + L+LK++AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSINRAPRKATHGTPGEFRELRLELKVLADVGLLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V+ + F++ADIPG+I+ A +GAG+G RFL+H RT + Sbjct: 181 SAKPKVADYPFTTLVPNLGVVRVDTESSFVVADIPGVIEGAAEGAGLGIRFLRHLARTRI 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNS----ELRKKIEIVGLSQIDTVDSDTLARK 292 LLHIV L E + + I++EL Y+ L+ K + ++ D + + + K Sbjct: 241 LLHIVDLLPFDESDPVKNFNGIMNELYKYSESKDISLKDKPVWLVFNKTDLLSEEEVEEK 300 Query: 293 KNELATQC---GQVPFEFSSITGHGIPQILECLHD 324 ++ + G V + S+I G +I + D Sbjct: 301 IADMLERLEWDGPV-YRMSAIQKEGTRKICNDIMD 334 >gi|308390185|gb|ADO32505.1| GTPase ObgE [Neisseria meningitidis alpha710] Length = 384 Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 209/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDEAVDPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|303325850|ref|ZP_07356293.1| Obg family GTPase CgtA [Desulfovibrio sp. 3_1_syn3] gi|302863766|gb|EFL86697.1| Obg family GTPase CgtA [Desulfovibrio sp. 3_1_syn3] Length = 366 Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 157/342 (45%), Positives = 229/342 (66%), Gaps = 17/342 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEAK+ +R+G GG G +SFRREKF+ GGPDGG+GG GG V+++A + L +L DFR Sbjct: 1 MRFVDEAKIQVRAGKGGHGCVSFRREKFVPRGGPDGGNGGEGGSVYLRADNRLLSLYDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEE--DGISLICDLDQEGQRIILA 118 ++ ++AQ+G+ G G KG D+VL +PVGT VF E +G L+ DL + ++A Sbjct: 61 LKRLYEAQNGQPGQGSQCDGKKGTDLVLGLPVGTLVFAEGPEGERLLADLSEPDSLALVA 120 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GN HFKS+T +AP +A PG G+E + L+LK++AD G+IGLPNAGKSTF++ Sbjct: 121 RGGRGGKGNEHFKSATMRAPRFAQPGEPGEELNLRLELKILADAGLIGLPNAGKSTFISR 180 Query: 179 VTRAKPKIADYPFTTLYPNLGIVKEGY---KEFILADIPGIIKNAHQGAGIGDRFLKHTE 235 V+ A+PKIA YPFTTL PNLG++ + K ++ADIPG+I+ AH G G+G RFLKH E Sbjct: 181 VSAARPKIAAYPFTTLTPNLGVMIDEVDPDKRMVIADIPGLIEGAHAGQGLGHRFLKHVE 240 Query: 236 RTHVLLHIVSALE-ENVQ--AAYQCILDELSAYNSEL--RKKIEIVGLSQIDTVDSDTLA 290 RT L+H++S + ++V+ A ++ + +EL ++ EL R++IE+V ++ID VD + L Sbjct: 241 RTRFLVHMLSIEDVDDVEPWAGFELVNEELRRFDPELAERRQIEVV--NKIDLVDEERLE 298 Query: 291 RKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 K A G+ F S+ Q LE L +++ +R E Sbjct: 299 TLKAR-AEADGRKIFFISARE----EQALEPLVAELWRLRDE 335 >gi|332308084|ref|YP_004435935.1| GTP-binding protein Obg/CgtA [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175413|gb|AEE24667.1| GTP-binding protein Obg/CgtA [Glaciecola agarilytica 4H-3-7+YE-5] Length = 389 Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 138/292 (47%), Positives = 203/292 (69%), Gaps = 6/292 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGGAG +SFRREK++ GGPDGG GG GG V++ A NLNTLID+R Sbjct: 1 MKFVDEAEIRVEAGDGGAGTVSFRREKYVPDGGPDGGDGGDGGSVYLVADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ +A+ G+ G + +G KG D+ + VPVGT+ + + L+ DL + GQR+ A G Sbjct: 61 FEKFHRAERGKNGQSSDCTGRKGADLEVKVPVGTRATDTETGELLGDLTKHGQRLKAAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FK+STN+AP G G +++ L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GYHGLGNARFKTSTNRAPRQKTLGTPGDVRMLKLELMLLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V+ + F++ADIPG+I+ A +GAG+G +FLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPNLGVVRLDAMSSFVIADIPGLIEGASEGAGLGIQFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH++ + + V+ A + I+ EL Y+ +L K + +++D + D Sbjct: 241 LLHLIDLMPADGSDPVENA-KAIVSELEKYSPKLAAKPRWLVFNKVDLMFED 291 >gi|282882922|ref|ZP_06291527.1| Obg family GTPase CgtA [Peptoniphilus lacrimalis 315-B] gi|281297333|gb|EFA89824.1| Obg family GTPase CgtA [Peptoniphilus lacrimalis 315-B] Length = 421 Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 144/323 (44%), Positives = 217/323 (67%), Gaps = 7/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+ +++G GG G +++RREK+ GGP GG GGRGGDV I+A L+TL+DFRY+ Sbjct: 2 FIDSAKIRLKAGRGGDGAVAWRREKYEPAGGPHGGDGGRGGDVIIKADEGLHTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KAQ+GE GM + + G GED++L VPVGT V +E+ +I D + ++ GG Sbjct: 62 REYKAQNGENGMNKLKYGKAGEDIILKVPVGTLVKDEETGGVIYDFKNKDDEFVICHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA +K+ST ++P +A G G+E+ + L+LKL+AD+G++G PN GKST L+ V++A Sbjct: 122 GGHGNAKYKTSTRRSPNFAQAGTKGEERSVILELKLLADVGLVGFPNVGKSTLLSQVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI++Y FTTL PNLG+V G +E F+LADIPG+I+ A QG G+GD FLKH ERT VL+ Sbjct: 182 RPKISNYHFTTLTPNLGLVSLGPEESFVLADIPGLIEGASQGIGLGDEFLKHIERTGVLI 241 Query: 242 HIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 H++ S + ++ Y+ I +EL YN +LR K +I+ +++D S K + Sbjct: 242 HVLDISGSENRDPLEDFYK-INEELYNYNEKLRDKTQIIFANKMDIPSSKKNLEKLKKAL 300 Query: 298 TQCGQVPFEFSSITGHGIPQILE 320 + Q+ E S+ TG + +++ Sbjct: 301 SSKYQI-IEGSAATGENVKLLMQ 322 >gi|239995271|ref|ZP_04715795.1| GTPase ObgE [Alteromonas macleodii ATCC 27126] Length = 388 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 138/286 (48%), Positives = 200/286 (69%), Gaps = 4/286 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G I FRREK++ GGPDGG GG GG V++QA NLNTLID+R Sbjct: 1 MKFVDEAEIRVEAGDGGNGTIGFRREKYVPKGGPDGGDGGDGGSVFLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ +A+ G+ G N G KG+D+ + VPVGT+ + D ++ DL + GQ++ +A G Sbjct: 61 FERFHRAERGQNGQGGNCIGKKGKDLTVMVPVGTRATDSDTGEVLGDLTRHGQKLKVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSSTN+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNARFKSSTNRAPRQKTNGTPGEIRNLKLELMLLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V++ + F++ADIPG+I+ A GAG+G RFLKH ER + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVRQDSQRSFVVADIPGLIEGAADGAGLGIRFLKHLERCRI 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 LLH+V E + + I++EL Y+ +L +K + +++D Sbjct: 241 LLHVVDIFPVDETDPAEHAKAIIEELEKYSPKLAEKPRWLVFNKVD 286 >gi|224370253|ref|YP_002604417.1| putative GTP-binding protein [Desulfobacterium autotrophicum HRM2] gi|261266819|sp|C0QLE9|OBG_DESAH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|223692970|gb|ACN16253.1| putative GTP-binding protein [Desulfobacterium autotrophicum HRM2] Length = 345 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 148/330 (44%), Positives = 221/330 (66%), Gaps = 6/330 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + + SG GG G +SFRRE+FIE GGP+GG GG+GG V + TL D R Sbjct: 1 MRFIDEASITVISGKGGPGCVSFRRERFIERGGPNGGDGGKGGSVIFETDPAKRTLFDLR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ +A++G G+ N+ G G D+++ VP GT V +++ +++ DL + G RI +A G Sbjct: 61 RQKIIRAKNGMPGLGSNKHGKNGVDLIIPVPPGTLVTDQETGAVLFDLTEPGTRITIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F +ST++AP +A PG+ G+E + L+LKL+AD+GI+GLPNAGKST ++ ++ Sbjct: 121 GRGGQGNKRFATSTHKAPRFAQPGMPGEEFHLKLELKLLADVGIVGLPNAGKSTLISKIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P+IADYPFTTL P+LG+V + E F +ADIPGII+ AH+G G+G +FLKH ERT + Sbjct: 181 SARPRIADYPFTTLTPSLGMVIPDFGEPFAVADIPGIIEGAHEGTGLGIQFLKHVERTGI 240 Query: 240 LLHI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+ VS +E +N A+ I ELS Y++ L KK ++V L++ID S + + Sbjct: 241 LIHLIDVSQIEPDNPLDAFNLINTELSLYSATLAKKPQLVVLNKIDLTGSMEKVEQFKK- 299 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 A G++ S+ TG G ++++ L +I Sbjct: 300 AYGTGEL-LTLSAATGEGTAKLIQILARQI 328 >gi|297616895|ref|YP_003702054.1| GTP-binding protein Obg/CgtA [Syntrophothermus lipocalidus DSM 12680] gi|297144732|gb|ADI01489.1| GTP-binding protein Obg/CgtA [Syntrophothermus lipocalidus DSM 12680] Length = 426 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 148/326 (45%), Positives = 217/326 (66%), Gaps = 8/326 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK+Y+++GDGG G ++FRREK++ GGP GG GGRGG+V + A L+TL+DF+Y+ Sbjct: 8 FVDQAKIYVKAGDGGNGAVAFRREKYVPMGGPAGGDGGRGGNVVLVADEGLSTLMDFKYK 67 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KA GE G +N G GED+++ VP GT V + D +I DL + GQ I+A GG Sbjct: 68 RHYKAARGEHGQGKNMHGRGGEDLLIRVPCGTVVKDADSGEVIADLTEPGQSAIVARGGR 127 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F S T +AP +A G G+EK + L+LKL+AD+G++G PNAGKST ++ ++ A Sbjct: 128 GGRGNARFASPTRRAPSFAEKGEPGEEKWLVLELKLLADVGLVGFPNAGKSTLISRLSAA 187 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADYPFTTL PNLG+V+ + F++ADIPG+I+ AHQGAG+G FL+H ERT VL+ Sbjct: 188 RPKIADYPFTTLVPNLGVVRMPDGDGFVIADIPGLIEGAHQGAGLGHEFLRHIERTRVLV 247 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT-VDSDTLARKKNELA 297 ++ E +V ++ +L EL YN L + I+ +++D D L + + Sbjct: 248 FVLDVAETEGRDVCDDFRVLLHELQQYNLGLASRPRILAANKMDIEAAPDKLEKLRQSFP 307 Query: 298 TQCGQVPFEFSSITGHGIPQILECLH 323 + F S++TG GI +L+ L+ Sbjct: 308 EEE---IFPISAVTGEGIEPLLQRLY 330 >gi|238797565|ref|ZP_04641062.1| Uncharacterized GTP-binding protein yhbZ [Yersinia mollaretii ATCC 43969] gi|238718562|gb|EEQ10381.1| Uncharacterized GTP-binding protein yhbZ [Yersinia mollaretii ATCC 43969] Length = 391 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 141/305 (46%), Positives = 209/305 (68%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGD+++ A NLNTLID+ Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDIYLLADENLNTLIDYH 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F+A+ G+ G R+ +G +G+D+ + VPVGT++ ++ ++ D+ + GQR+++A G Sbjct: 61 FVKSFRAERGQNGQSRDCTGKRGKDITIKVPVGTRILDQGTGEIVGDMTRHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GFHGLGNARFKSSVNRAPRQKTMGTEGETRDLTLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ Y++ F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVRMDYEQSFVVADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V E + Q I++EL Y+ L KK + ++ID +D + + + Sbjct: 241 LLHLVDLAPIDESDPVKNAQVIINELQQYSENLAKKPRWLVFNKIDLIDPEEAETRAKAI 300 Query: 297 ATQCG 301 G Sbjct: 301 VEALG 305 >gi|295692859|ref|YP_003601469.1| GTP-binding protein [Lactobacillus crispatus ST1] gi|295030965|emb|CBL50444.1| GTP-binding protein [Lactobacillus crispatus ST1] Length = 434 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 146/324 (45%), Positives = 214/324 (66%), Gaps = 8/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EK++ GGP GG GGRGG + A S L TL+DFRY+ Sbjct: 4 FVDQTKIEVQAGKGGDGMVAFRHEKYVPNGGPAGGDGGRGGSIIFVADSGLRTLMDFRYR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA GE G +++ G +D+ L VPVGT V++ D LI DL ++GQ +++A GG Sbjct: 64 RKFKADSGENGRIKSQYGRAAKDLYLKVPVGTTVYDYDTNELIGDLTEKGQELVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +S N AP A G G+++++ L+LKL+AD+G++G P+ GKST L+ T+A Sbjct: 124 GGRGNIHFATSVNTAPEIAENGEPGEDRVLRLELKLLADVGLVGFPSVGKSTLLSVTTKA 183 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+I+ A QG G+G +FL+H ERT V+ Sbjct: 184 KPKIAAYQFTTLTPNLGMVILPDG-RDFSMADLPGLIEGASQGVGLGIQFLRHVERTKVI 242 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 LH+VS N + A Y I EL Y ++L KK E++ SQ+D + + LA K L Sbjct: 243 LHLVSMDPNNGREAIDDYHTIKKELKNYETDLSKKRELIVASQMDIPGAEEKLAEFKKAL 302 Query: 297 ATQCGQVP-FEFSSITGHGIPQIL 319 + P +E SS+T G+ +++ Sbjct: 303 KAEGNNEPIYEISSVTHKGVDKLM 326 >gi|325287016|ref|YP_004262806.1| GTPase obg [Cellulophaga lytica DSM 7489] gi|324322470|gb|ADY29935.1| GTPase obg [Cellulophaga lytica DSM 7489] Length = 333 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 152/327 (46%), Positives = 213/327 (65%), Gaps = 6/327 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ + SG+GG G + REK+I GGPDGG GGRGG + ++ NL TL++++ Q Sbjct: 6 FVDYVKMTVSSGNGGKGSVHLHREKYITKGGPDGGDGGRGGHIILRGNKNLWTLLNYKVQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA HGE G K +GA GEDV + VP+GT V + ++ ++ + G+ +IL GG Sbjct: 66 RHFKAGHGEHGSKGRSTGADGEDVFMDVPLGTVVRNTETNEIVLEVTEHGEEVILLKGGL 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSSTNQ P YA PG+ G+E I L+LK++AD+G++G PNAGKST L+ +T A Sbjct: 126 GGRGNWHFKSSTNQTPRYAQPGLPGEEMQITLELKVLADVGLVGFPNAGKSTLLSVLTSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLGIVK ++ F++ADIPGII+ A +G G+G FL+H ER LL Sbjct: 186 KPKIADYEFTTLKPNLGIVKYRDFQSFVMADIPGIIEGAAEGKGLGHYFLRHIERNATLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A +++ Y+ +L+EL YN EL K V +S+ D +D + +A EL Sbjct: 246 FLIPADSKDIGKEYRILLNELKRYNPELIDKERFVVISKSDMLDDELIAEMSAELDKDLD 305 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIF 327 + F SS+ G L+ L DK++ Sbjct: 306 GATYMFISSVAQQG----LQELKDKLW 328 >gi|224588352|gb|ACN58976.1| GTP-binding protein Obg [uncultured bacterium BLR10] Length = 369 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 139/289 (48%), Positives = 200/289 (69%), Gaps = 5/289 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + GDGG G SF REKF FGGPDGG GG+GG +W A N+NTL+DFR Sbjct: 1 MKFIDEAKIEVIGGDGGNGCASFCREKFRPFGGPDGGDGGKGGSIWAVADRNINTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + K + GE G + G +D+ L +PVGT + +E ++ DL + GQ +LA G Sbjct: 61 FSKMHKGRDGEPGRGADCYGKGADDIHLRMPVGTLIIDEASGEIMADLTEHGQMELLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HFK+STN+AP G G+ + + L+LK++AD+G++G+PNAGKSTF+++V+ Sbjct: 121 GEGGWGNIHFKTSTNRAPRQKTEGKEGERRELRLELKVLADVGLLGMPNAGKSTFISAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ + K F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLHPNLGVVRVSHEKSFVIADIPGLIEGASEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTV 284 LLHIV + E NV + ++ EL Y+ L K + L+++D V Sbjct: 241 LLHIVDLAPFETNVDPVKEAKALVKELKKYDESLVDKPRWLVLNKLDMV 289 >gi|150390074|ref|YP_001320123.1| GTP-binding protein Obg/CgtA [Alkaliphilus metalliredigens QYMF] gi|261266646|sp|A6TQJ6|OBG_ALKMQ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|149949936|gb|ABR48464.1| GTP-binding protein Obg/CgtA [Alkaliphilus metalliredigens QYMF] Length = 427 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 145/328 (44%), Positives = 216/328 (65%), Gaps = 4/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK++++SG GG G ++FR+EK++ GGP GG GG+GG++ + TL+DFRY+ Sbjct: 2 FIDKAKIHLKSGKGGDGAVAFRKEKYVPAGGPAGGDGGKGGNIIFVVDEGMRTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H+ A++GE G R + G GED++L VP GT + EE L+ DL Q +R I+A GG Sbjct: 62 MHYSAENGENGKGRMQYGKDGEDLILRVPPGTIIREEKTGHLVADLTQPKERRIIAKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKS+T QAP +A G+ G+E + L+LKLIAD+G++G PN GKST L+ VT A Sbjct: 122 GGKGNVHFKSATRQAPQFAIAGVKGEELTVTLELKLIADVGLVGFPNVGKSTLLSVVTSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+V+ F+LADIPG+I+ AH+G G+G FL+H ERT +L+ Sbjct: 182 KPKIADYHFTTLTPNLGVVRTKRGDSFVLADIPGLIEGAHEGTGLGHEFLRHVERTKLLI 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+ V+ +E + ++ I +EL YN +L + ++V ++ D + + +K E Sbjct: 242 HVLDVAGIEGRDPLEDFEKINEELKLYNEKLSTRPQVVAANKTDVMGENENLKKLTEALA 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKI 326 + G F S+ T G+ ++L+ + K+ Sbjct: 302 EKGIEVFPVSAATKQGLDELLDYVSIKL 329 >gi|256843064|ref|ZP_05548552.1| GTPase ObgE [Lactobacillus crispatus 125-2-CHN] gi|256850284|ref|ZP_05555713.1| GTPase ObgE [Lactobacillus crispatus MV-1A-US] gi|262046037|ref|ZP_06019001.1| GTPase ObgE [Lactobacillus crispatus MV-3A-US] gi|293381295|ref|ZP_06627298.1| Obg family GTPase CgtA [Lactobacillus crispatus 214-1] gi|312977249|ref|ZP_07788997.1| Obg family GTPase CgtA [Lactobacillus crispatus CTV-05] gi|256614484|gb|EEU19685.1| GTPase ObgE [Lactobacillus crispatus 125-2-CHN] gi|256712921|gb|EEU27913.1| GTPase ObgE [Lactobacillus crispatus MV-1A-US] gi|260573996|gb|EEX30552.1| GTPase ObgE [Lactobacillus crispatus MV-3A-US] gi|290922111|gb|EFD99110.1| Obg family GTPase CgtA [Lactobacillus crispatus 214-1] gi|310895680|gb|EFQ44746.1| Obg family GTPase CgtA [Lactobacillus crispatus CTV-05] Length = 434 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 146/324 (45%), Positives = 214/324 (66%), Gaps = 8/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EK++ GGP GG GGRGG + A S L TL+DFRY+ Sbjct: 4 FVDQTKIEVQAGKGGDGMVAFRHEKYVPNGGPAGGDGGRGGSIIFVADSGLRTLMDFRYR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA GE G +++ G +D+ L VPVGT V++ D LI DL ++GQ +++A GG Sbjct: 64 RKFKADSGENGRIKSQYGRAAKDLYLKVPVGTTVYDYDTNELIGDLTEKGQELVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +S N AP A G G+++++ L+LKL+AD+G++G P+ GKST L+ T+A Sbjct: 124 GGRGNIHFATSVNTAPEIAENGEPGEDRVLRLELKLLADVGLVGFPSVGKSTLLSVTTKA 183 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+I+ A QG G+G +FL+H ERT V+ Sbjct: 184 KPKIAAYQFTTLTPNLGMVILPDG-RDFSMADLPGLIEGASQGVGLGIQFLRHVERTKVI 242 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 LH+VS N + A Y I EL Y ++L KK E++ SQ+D + + LA K L Sbjct: 243 LHLVSMDPNNGREAIDDYHTIKKELKNYETDLSKKRELIVASQMDIPGAEEKLAEFKKAL 302 Query: 297 ATQCGQVP-FEFSSITGHGIPQIL 319 + P +E SS+T G+ +++ Sbjct: 303 KAEGNNEPIYEISSVTHKGVDKLM 326 >gi|254671012|emb|CBA07793.1| probable GTP-binding protein [Neisseria meningitidis alpha153] Length = 384 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 209/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDEAVDPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|325141359|gb|EGC63842.1| GTP-binding protein Obg/CgtA [Neisseria meningitidis 961-5945] Length = 384 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 208/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D + DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDETVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGEARSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|241667678|ref|ZP_04755256.1| GTPase ObgE [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876223|ref|ZP_05248933.1| GTPase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842244|gb|EET20658.1| GTPase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 334 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 141/304 (46%), Positives = 198/304 (65%), Gaps = 4/304 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE + +++G GG G +SFRREK++ GGPDGG GG GG ++++A N+NTLID+R Sbjct: 1 MRFVDEVVIKLQAGKGGNGCVSFRREKYVPRGGPDGGDGGHGGSIYLKADENVNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ + A++G G RN G GED+ L VPVGT VF+ + I ++ G+ + L G Sbjct: 61 YKREYYAENGRPGEGRNCYGKAGEDMYLIVPVGTSVFDLETNKKIGEVLNNGETLKLVSG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN HFKSSTNQAP G G+ K + L+L L+ADI ++GLPNAGKST + SV+ Sbjct: 121 GKRGIGNTHFKSSTNQAPRKFTLGEEGEYKEVRLELNLLADIALLGLPNAGKSTLIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PK+ADYPFTT+YP+LG+VK G F++ADIPG+I+ A +GAG+G RFLKH R + Sbjct: 181 EATPKVADYPFTTMYPHLGVVKVGVDSFVMADIPGVIEGAAEGAGLGLRFLKHLTRARCV 240 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH+V E + Y + EL Y+ EL K + +++ID + +D + K E Sbjct: 241 LHVVDICPFNESDPVENYFAVEKELKKYSEELYDKPRFLVINKIDLL-ADEVEEKCQEFV 299 Query: 298 TQCG 301 Q G Sbjct: 300 KQIG 303 >gi|86607004|ref|YP_475767.1| GTPase ObgE [Synechococcus sp. JA-3-3Ab] gi|123505320|sp|Q2JS78|OBG_SYNJA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|86555546|gb|ABD00504.1| GTP-binding protein, GTP1/OBG family [Synechococcus sp. JA-3-3Ab] Length = 385 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 148/327 (45%), Positives = 213/327 (65%), Gaps = 5/327 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D+A++ +++G+GG G ++FRREK++ GGP GG+GGRGG V + A L TL+DFR Sbjct: 1 MHFIDQAEIEVQAGNGGDGIVAFRREKYVPAGGPSGGNGGRGGSVILVADPGLQTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q KA+HG KG +RSGA G D ++ VP GT VF+ + L+ DL Q G R+++A G Sbjct: 61 FQPVIKAEHGAKGGPNHRSGASGADRLVRVPCGTMVFDTETGELLGDLVQPGDRLLVARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAHF S+ N+AP G G+ + + L+LKLIA++GI+G+PNAGKST ++ V+ Sbjct: 121 GKGGLGNAHFLSNHNRAPRQFTRGQPGERRRLRLELKLIAEVGIVGMPNAGKSTLISVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V + + ADIPG+I+ AH+G G+G FL+H ERT V Sbjct: 181 SARPKIADYPFTTLQPNLGVVPHPAGDGVVFADIPGLIEGAHRGVGLGHDFLRHVERTRV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V + YQ I EL AY L K +IV L++ID ++ ++ + L+ Sbjct: 241 LIHLVDGTAADPVRDYQIIQQELRAYGHGLSDKPQIVVLNKIDALEPQEVSERTQRLSMA 300 Query: 300 CGQVPFEFSSITGHGIPQIL----ECL 322 G S++ G+ +L +CL Sbjct: 301 AGAPVSAISAVARQGLEPLLQRVWQCL 327 >gi|15616993|ref|NP_240206.1| GTPase ObgE [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681745|ref|YP_002468131.1| hypothetical 43.3 kDa GTP-binding protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682300|ref|YP_002468684.1| hypothetical 43.3 kDa GTP-binding protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471446|ref|ZP_05635445.1| hypothetical 43.3 kDa GTP-binding protein [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|13878843|sp|P57469|OBG_BUCAI RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266693|sp|B8D9H2|OBG_BUCA5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266694|sp|B8D7S4|OBG_BUCAT RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|25295779|pir||D84975 hypothetical protein yhbZ [imported] - Buchnera sp. (strain APS) gi|10039058|dbj|BAB13092.1| hypothetical 43.3 kD GTP-binding protein in dacB-rpmA intergenic region (F390) [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219622033|gb|ACL30189.1| hypothetical 43.3 kDa GTP-binding protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624588|gb|ACL30743.1| hypothetical 43.3 kDa GTP-binding protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086126|gb|ADP66208.1| GTPase ObgE [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086699|gb|ADP66780.1| GTPase ObgE [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087284|gb|ADP67364.1| GTPase ObgE [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 334 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 141/303 (46%), Positives = 208/303 (68%), Gaps = 4/303 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D+A +++ +G+GG G +SFRREK+I GGPDGG+GG GG++W++A +NLNTLID R Sbjct: 1 MKFIDQAIIHVIAGNGGNGCVSFRREKYIPKGGPDGGNGGDGGNIWLEANNNLNTLIDLR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+AQ+G+ G R SG KG+D+ + VP+GT+V +I DL Q Q++++A G Sbjct: 61 FKKKFQAQNGQNGSSRKSSGKKGDDIKIHVPIGTKVINYQTREIIGDLIQHKQKMLIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSSTN+ P + G +G+++ I L+L L+AD+G +G+PN GKST + +++ Sbjct: 121 GWHGLGNARFKSSTNRTPRQSTLGSIGEKRDIQLELMLLADVGTLGMPNVGKSTLVTNIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AK KI+DYPFTTL+P LG V + K+FI+ADIPGIIK A GAG+G RFLKH ER + Sbjct: 181 GAKTKISDYPFTTLHPVLGSVNIQKNKKFIIADIPGIIKGASYGAGLGIRFLKHLERCKL 240 Query: 240 LLHIVSALEEN---VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHI+ + +N + +L+EL Y+ +L K ++ID + + L + E+ Sbjct: 241 LLHIIDLVPQNNCHPSDNIKTVLNELKKYSLKLYNKPRWFIFNKIDLLSVEELNQIIKEI 300 Query: 297 ATQ 299 Q Sbjct: 301 IFQ 303 >gi|22124589|ref|NP_668012.1| GTPase ObgE [Yersinia pestis KIM 10] gi|45440428|ref|NP_991967.1| GTPase ObgE [Yersinia pestis biovar Microtus str. 91001] gi|51594819|ref|YP_069010.1| GTPase ObgE [Yersinia pseudotuberculosis IP 32953] gi|108806057|ref|YP_649973.1| GTPase ObgE [Yersinia pestis Antiqua] gi|108813413|ref|YP_649180.1| GTPase ObgE [Yersinia pestis Nepal516] gi|145600805|ref|YP_001164881.1| GTPase ObgE [Yersinia pestis Pestoides F] gi|153947786|ref|YP_001402563.1| GTPase ObgE [Yersinia pseudotuberculosis IP 31758] gi|153997286|ref|ZP_02022386.1| putative GTP-binding protein [Yersinia pestis CA88-4125] gi|162419823|ref|YP_001608274.1| GTPase ObgE [Yersinia pestis Angola] gi|165928177|ref|ZP_02224009.1| GTP-binding protein Obg/CgtA [Yersinia pestis biovar Orientalis str. F1991016] gi|165937432|ref|ZP_02225995.1| GTP-binding protein Obg/CgtA [Yersinia pestis biovar Orientalis str. IP275] gi|166011334|ref|ZP_02232232.1| GTP-binding protein Obg/CgtA [Yersinia pestis biovar Antiqua str. E1979001] gi|166214038|ref|ZP_02240073.1| GTP-binding protein Obg/CgtA [Yersinia pestis biovar Antiqua str. B42003004] gi|167401242|ref|ZP_02306742.1| GTP-binding protein Obg/CgtA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420644|ref|ZP_02312397.1| GTP-binding protein Obg/CgtA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423370|ref|ZP_02315123.1| GTP-binding protein Obg/CgtA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470189|ref|ZP_02334893.1| GTP-binding protein Obg/CgtA [Yersinia pestis FV-1] gi|170025958|ref|YP_001722463.1| GTPase ObgE [Yersinia pseudotuberculosis YPIII] gi|186893828|ref|YP_001870940.1| GTPase ObgE [Yersinia pseudotuberculosis PB1/+] gi|218930523|ref|YP_002348398.1| GTPase ObgE [Yersinia pestis CO92] gi|229839162|ref|ZP_04459321.1| GTPase involved in cell partioning and DNA repair [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896651|ref|ZP_04511818.1| GTPase involved in cell partioning and DNA repair [Yersinia pestis Pestoides A] gi|229899726|ref|ZP_04514867.1| GTPase involved in cell partioning and DNA repair [Yersinia pestis biovar Orientalis str. India 195] gi|229903888|ref|ZP_04519001.1| GTPase involved in cell partioning and DNA repair [Yersinia pestis Nepal516] gi|270489123|ref|ZP_06206197.1| Obg family GTPase CgtA [Yersinia pestis KIM D27] gi|294505360|ref|YP_003569422.1| putative GTP-binding protein [Yersinia pestis Z176003] gi|81640544|sp|Q66F73|OBG_YERPS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|123073164|sp|Q1CEK0|OBG_YERPN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|123246062|sp|Q1CBZ4|OBG_YERPA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|123777683|sp|Q7CKJ6|OBG_YERPE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277755|sp|A7FMT5|OBG_YERP3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277756|sp|B2K2P2|OBG_YERPB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277757|sp|A9R591|OBG_YERPG RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277758|sp|A4TRJ6|OBG_YERPP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277759|sp|B1JMI3|OBG_YERPY RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|21957391|gb|AAM84263.1|AE013669_13 putative GTP-binding factor [Yersinia pestis KIM 10] gi|45435285|gb|AAS60844.1| putative GTP-binding protein [Yersinia pestis biovar Microtus str. 91001] gi|51588101|emb|CAH19707.1| putative GTP-binding protein [Yersinia pseudotuberculosis IP 32953] gi|108777061|gb|ABG19580.1| GTP-binding protein [Yersinia pestis Nepal516] gi|108777970|gb|ABG12028.1| putative GTP-binding protein [Yersinia pestis Antiqua] gi|115349134|emb|CAL22097.1| putative GTP-binding protein [Yersinia pestis CO92] gi|145212501|gb|ABP41908.1| GTP-binding protein [Yersinia pestis Pestoides F] gi|149288923|gb|EDM39003.1| putative GTP-binding protein [Yersinia pestis CA88-4125] gi|152959281|gb|ABS46742.1| GTP-binding protein Obg/CgtA [Yersinia pseudotuberculosis IP 31758] gi|162352638|gb|ABX86586.1| GTP-binding protein Obg/CgtA [Yersinia pestis Angola] gi|165914537|gb|EDR33151.1| GTP-binding protein Obg/CgtA [Yersinia pestis biovar Orientalis str. IP275] gi|165919864|gb|EDR37165.1| GTP-binding protein Obg/CgtA [Yersinia pestis biovar Orientalis str. F1991016] gi|165989718|gb|EDR42019.1| GTP-binding protein Obg/CgtA [Yersinia pestis biovar Antiqua str. E1979001] gi|166204833|gb|EDR49313.1| GTP-binding protein Obg/CgtA [Yersinia pestis biovar Antiqua str. B42003004] gi|166961450|gb|EDR57471.1| GTP-binding protein Obg/CgtA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049267|gb|EDR60675.1| GTP-binding protein Obg/CgtA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057540|gb|EDR67286.1| GTP-binding protein Obg/CgtA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752492|gb|ACA70010.1| GTP-binding protein Obg/CgtA [Yersinia pseudotuberculosis YPIII] gi|186696854|gb|ACC87483.1| GTP-binding protein Obg/CgtA [Yersinia pseudotuberculosis PB1/+] gi|229679658|gb|EEO75761.1| GTPase involved in cell partioning and DNA repair [Yersinia pestis Nepal516] gi|229687218|gb|EEO79293.1| GTPase involved in cell partioning and DNA repair [Yersinia pestis biovar Orientalis str. India 195] gi|229695528|gb|EEO85575.1| GTPase involved in cell partioning and DNA repair [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700429|gb|EEO88461.1| GTPase involved in cell partioning and DNA repair [Yersinia pestis Pestoides A] gi|262363425|gb|ACY60146.1| putative GTP-binding protein [Yersinia pestis D106004] gi|262367200|gb|ACY63757.1| putative GTP-binding protein [Yersinia pestis D182038] gi|270337627|gb|EFA48404.1| Obg family GTPase CgtA [Yersinia pestis KIM D27] gi|294355819|gb|ADE66160.1| putative GTP-binding protein [Yersinia pestis Z176003] gi|320013713|gb|ADV97284.1| GTPase involved in cell partioning and DNA repair [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 390 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 140/305 (45%), Positives = 210/305 (68%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGD+++ A NLNTLID+R Sbjct: 1 MKFVDEAAILVVAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDIYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F+A+ G+ G R+ +G +G+D+ + VPVGT+V ++ ++ D+ + GQR+++A G Sbjct: 61 FVKSFRAERGQNGQSRDCTGKRGKDITIKVPVGTRVLDQGTGEIVGDMVRHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN+ FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GFHGLGNSRFKSSVNRAPRQKTMGTEGETRELMLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ Y++ F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVRMDYEQSFVIADIPGLIEGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V E + + I++EL Y+ L +K + ++ID +D + ++ + Sbjct: 241 LLHLVDLAPIDESDPAENAKVIVNELQQYSENLAEKPRWLVFNKIDLIDPEEAEKRAKAI 300 Query: 297 ATQCG 301 G Sbjct: 301 VETLG 305 >gi|162450070|ref|YP_001612437.1| GTP binding protein [Sorangium cellulosum 'So ce 56'] gi|261263093|sp|A9FJF8|OBG_SORC5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|161160652|emb|CAN91957.1| GTP binding protein [Sorangium cellulosum 'So ce 56'] Length = 346 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 144/332 (43%), Positives = 211/332 (63%), Gaps = 11/332 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D ++ + +GDGG G I+FRREK+I FGGP GG GGRGGDV L+TL+DF Sbjct: 1 MRFVDRCRLKVIAGDGGNGAIAFRREKYIPFGGPAGGDGGRGGDVVFVGDGGLSTLLDFT 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A GE GM + G G D V +PVGTQ+F+ + L+ D+ + GQR+I+A G Sbjct: 61 YARTLEADRGEHGMGSDCHGRAGADRVEKLPVGTQIFDAESGELLADVTEHGQRVIVARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKS ++AP A PG G+ + + L+LK++AD+G++G PNAGKSTF+A+V+ Sbjct: 121 GKGGRGNLHFKSPHDRAPRRAEPGEPGEARELRLELKVLADVGLLGFPNAGKSTFVAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGI------VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 A+PKI DYPFTTL P LG+ V+ G F++ADIPG++ A +G G+G +FL+H Sbjct: 181 AARPKIGDYPFTTLTPILGMVEIGGGVRAGGSSFVIADIPGLVPGASEGVGLGIQFLRHV 240 Query: 235 ERTHVLLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLA 290 ERT LLH+V+ A Y+ + EL ++ E+ ++ EIV L++ D + D Sbjct: 241 ERTRALLHLVTLDPGEGREPLADYRALRKELKKFSPEIAERPEIVVLTKADLTEVRDAYP 300 Query: 291 RKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + K A ++ S+ TG G+P+++ L Sbjct: 301 KLKARFAKAKVKLHL-ISAATGEGVPELVREL 331 >gi|302343828|ref|YP_003808357.1| GTP-binding protein Obg/CgtA [Desulfarculus baarsii DSM 2075] gi|301640441|gb|ADK85763.1| GTP-binding protein Obg/CgtA [Desulfarculus baarsii DSM 2075] Length = 340 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 143/323 (44%), Positives = 215/323 (66%), Gaps = 7/323 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + + +G+GG G SF REKF GGPDGG+GGRGGDV I ++ + TL D Sbjct: 1 MRFIDEATIEVTAGNGGDGCASFLREKFRPRGGPDGGNGGRGGDVIIVGSNRVATLADHS 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HFKA G G + G GED +TVPVGT +++++ L+ D+ +GQ +I+A G Sbjct: 61 YLRHFKAGRGVHGQGSQKHGRAGEDKRVTVPVGTLIYDQETGELLADIVADGQEVIVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+GN HF SSTN+AP A+PG G+++ + L+LKL+A +G+IG PNAGKS+ + + + Sbjct: 121 GRGGYGNLHFLSSTNRAPRRADPGNEGEKRTLRLELKLLAHVGLIGQPNAGKSSLVRAFS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+ + G F +ADIPG+++ AHQG+G+G RFLKH ERT + Sbjct: 181 AARPKVADYPFTTLTPNLGVAQVPGGDPFTIADIPGLVEGAHQGSGLGLRFLKHVERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 +++V ++ I+ EL+AY+ EL ++ +V +++D + A +E A + Sbjct: 241 FVYVVDMSADDPYNDLSTIIGELTAYDPELGRRAGVVAANKMDLAQA---AENFDEFAQR 297 Query: 300 C---GQVPFEFSSITGHGIPQIL 319 G + F S++TG G+ ++L Sbjct: 298 AQAEGMLVFPCSTLTGQGLKELL 320 >gi|210633021|ref|ZP_03297621.1| hypothetical protein COLSTE_01529 [Collinsella stercoris DSM 13279] gi|210159308|gb|EEA90279.1| hypothetical protein COLSTE_01529 [Collinsella stercoris DSM 13279] Length = 501 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 146/340 (42%), Positives = 216/340 (63%), Gaps = 13/340 (3%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F D ++ ++ GDGGAG +SFRRE F+ GGPDGG GG GGDV IQA + L++LID+R+ Sbjct: 18 QFTDICRINVKGGDGGAGCMSFRREAFVPKGGPDGGDGGHGGDVVIQADAQLSSLIDYRF 77 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISL-----ICDLDQEGQRII 116 + HF+A+ G G + GA G D+VL VP+GT + E D ++ I DL +G+R++ Sbjct: 78 KHHFRAEAGTHGKGAKKDGADGRDLVLKVPMGTVIRELDSSTMEPRYEIADLTHDGERVV 137 Query: 117 LAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFL 176 +APGG GG GN HF +ST +AP +A G E I L++KL+AD ++G P+ GKS+ + Sbjct: 138 VAPGGTGGLGNPHFVTSTRRAPAFAQKGEPAIEHWIELEMKLMADAALVGFPSVGKSSLI 197 Query: 177 ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTER 236 A ++ A+PKIADYPFTTL PNLG+V+ G +++AD+PG+I+ A +G G+G +FL+H ER Sbjct: 198 ARMSAARPKIADYPFTTLVPNLGMVRAGEYSYVVADVPGLIEGAAEGKGLGHQFLRHVER 257 Query: 237 THVLLHIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT--VDSDTLA 290 T ++LH+V S + Y+ I DEL Y SEL + +IV ++ D V A Sbjct: 258 TALILHVVDITGSYEGRDPLEDYRIINDELRRYASELADRPQIVVANKCDASGVSDRVQA 317 Query: 291 RKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 K LA G F S++TG G+ ++ +++ +R Sbjct: 318 LKMAALAD--GHEFFAVSALTGAGLQTLMLACGERVSELR 355 >gi|254468849|ref|ZP_05082255.1| GTP-binding protein Obg/CgtA [beta proteobacterium KB13] gi|207087659|gb|EDZ64942.1| GTP-binding protein Obg/CgtA [beta proteobacterium KB13] Length = 336 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 159/327 (48%), Positives = 217/327 (66%), Gaps = 9/327 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + + +GDGG G SFRREKF GGP GG GGRGG V+ QA NLNTLIDFR Sbjct: 1 MKFIDEVLIKVFAGDGGNGIASFRREKFEPMGGPSGGDGGRGGSVFFQADENLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ +AQ GE G ++ GA GED+VL VPVGT + + ++ DL Q GQ+I++A G Sbjct: 61 FKKEHRAQRGENGRSSDQYGAAGEDLVLKVPVGTVIKDSFSENIFGDLTQHGQKILVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP G G+E ++L+LKLIADIG++GLPNAGKS+F+ V+ Sbjct: 121 GKGGLGNIHFKSSINRAPRQFTHGEPGEEFELFLELKLIADIGLVGLPNAGKSSFIRKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTL PNLG+VK + K F++AD+PG+I+ A G G+GD+FLKH RT + Sbjct: 181 AATPKVADYPFTTLQPNLGVVKFDFDKSFVIADVPGLIEGASDGVGLGDKFLKHLTRTRL 240 Query: 240 LLHIVSALEENVQAA-----YQCILDELSAYNSELRKKIEIVGLSQID-TVDSDTLARKK 293 LLH++ L N+ + Q I+ EL Y L K + L++ID D+D L +K+ Sbjct: 241 LLHLIDGL-SNISGSDPIDDAQTIIGELKKYEETLFNKPRWIVLNKIDLNYDADAL-KKQ 298 Query: 294 NELATQCGQVPFEFSSITGHGIPQILE 320 ++ F SS+TG G ++++ Sbjct: 299 IKVKIGWNDKIFVISSLTGQGCKELIK 325 >gi|332140077|ref|YP_004425815.1| GTPase CgtA [Alteromonas macleodii str. 'Deep ecotype'] gi|332143125|ref|YP_004428863.1| GTPase CgtA [Alteromonas macleodii str. 'Deep ecotype'] gi|261266648|sp|B4RZH3|OBG_ALTMD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|327550099|gb|AEA96817.1| GTPase CgtA [Alteromonas macleodii str. 'Deep ecotype'] gi|327553147|gb|AEA99865.1| GTPase CgtA [Alteromonas macleodii str. 'Deep ecotype'] Length = 392 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 137/286 (47%), Positives = 199/286 (69%), Gaps = 4/286 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G I FRREK++ GGPDGG GG GG V++QA NLNTLID+R Sbjct: 1 MKFVDEAEIRVEAGDGGNGVIGFRREKYVPKGGPDGGDGGDGGSVFLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ +A+ G+ G N G KG+D+ + VPVGT+ + D ++ DL + GQ++ +A G Sbjct: 61 FERFHRAERGQNGQGSNCIGKKGQDLTVMVPVGTRATDSDTGEVLGDLTRHGQKLKVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSTNRAPRQKTNGTPGEIRNLKLELMLLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V++ + F++ADIPG+I+ A GAG+G RFLKH ER + Sbjct: 181 AAKPKVADYPFTTLVPNLGVVRQDAQRSFVVADIPGLIEGAADGAGLGIRFLKHLERCRI 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 LLH+V E + + I++EL Y+ +L +K + +++D Sbjct: 241 LLHVVDIFPVDETDPADNAKAIIEELEKYSPKLAQKPRWLVFNKVD 286 >gi|295109988|emb|CBL23941.1| Obg family GTPase CgtA [Ruminococcus obeum A2-162] Length = 430 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 149/338 (44%), Positives = 214/338 (63%), Gaps = 10/338 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+ IRSG GG G +SFRRE ++ GGPDGG GGRGGDV + NTL ++R++ Sbjct: 2 FADRAKIIIRSGKGGDGHVSFRRELYVPNGGPDGGDGGRGGDVIFEVDEGQNTLGEYRHK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 FKAQ G++G K+ GA G+D++L VP GT + E +I D+ E +R I+ GG Sbjct: 62 HKFKAQDGQEGGKKRCHGADGDDIILKVPEGTVIMEAQSHKVIADMSGENRRQIVLKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+ + T Q P YA PG QE + L+LK+IAD+G++G PN GKSTFL+ VT A Sbjct: 122 GGKGNQHYATPTMQVPKYAQPGQPAQELEVLLELKVIADVGLVGFPNVGKSTFLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIA+Y FTTL PNLG+V F++ADIPG+I+ A +G G+G FL+H ERT VL+H Sbjct: 182 QPKIANYHFTTLSPNLGVVDTANGGFVIADIPGLIEGASEGVGLGHEFLRHIERTRVLVH 241 Query: 243 IVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV----DSDTLARKKN 294 IV A + + Y+ I EL AYN E+ + +++ +++D + D + + + K Sbjct: 242 IVDAASTEGRDPIDDIYK-INHELEAYNPEIAARPQLIAANKVDCIFDGDDENPIDKLKA 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 E + +V + S++TG GI ++L + D + S+ E Sbjct: 301 EFEPKGIKV-YPISAVTGQGIKELLFAIKDLLLSVPAE 337 >gi|325129294|gb|EGC52132.1| GTP-binding protein Obg/CgtA [Neisseria meningitidis OX99.30304] gi|325135314|gb|EGC57935.1| GTP-binding protein Obg/CgtA [Neisseria meningitidis M0579] gi|325201279|gb|ADY96733.1| GTP-binding protein Obg/CgtA [Neisseria meningitidis M01-240149] Length = 384 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 141/292 (48%), Positives = 208/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +P+GT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPIGTLIRDLDTDEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETANPAEEALAIINELRKYDEELYDKPRWLVLNKLDMLDEE 292 >gi|15677906|ref|NP_275074.1| GTPase ObgE [Neisseria meningitidis MC58] gi|81784102|sp|Q9JXE5|OBG_NEIMB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|7227348|gb|AAF42403.1| GTP-binding protein [Neisseria meningitidis MC58] gi|316983976|gb|EFV62955.1| GTP-binding protein Obg/CgtA [Neisseria meningitidis H44/76] gi|325133261|gb|EGC55927.1| GTP-binding protein Obg/CgtA [Neisseria meningitidis M13399] gi|325139406|gb|EGC61946.1| GTP-binding protein Obg/CgtA [Neisseria meningitidis CU385] gi|325201131|gb|ADY96586.1| GTP-binding protein Obg/CgtA [Neisseria meningitidis H44/76] gi|325206987|gb|ADZ02440.1| GTP-binding protein Obg/CgtA [Neisseria meningitidis M04-240196] Length = 384 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 208/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D + DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTGETVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGEARSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|307110037|gb|EFN58274.1| hypothetical protein CHLNCDRAFT_8434 [Chlorella variabilis] Length = 436 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 133/289 (46%), Positives = 190/289 (65%), Gaps = 3/289 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 ++ D A++Y++ GDGG G ++FRREK++ GGP GG+GG GG V+++A LN+L+ FR Sbjct: 1 VRCFDTARIYVKGGDGGRGCVAFRREKYVPRGGPSGGNGGNGGSVYLEADPALNSLMAFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEE---DGISLICDLDQEGQRIIL 117 Q HF+A HG G + GA D+V+ VP GT V E +G ++ +L + G R ++ Sbjct: 61 RQVHFRADHGVPGQGSDMHGANARDLVVRVPPGTTVRERGAGEGAPVLHELLRPGDRALV 120 Query: 118 APGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 APGG GG GN FK++ N AP A G GQE I L+LKL+AD+GIIG PNAGKST L+ Sbjct: 121 APGGRGGRGNLAFKTARNTAPALAEFGEKGQEVWIDLELKLVADVGIIGCPNAGKSTLLS 180 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 V+ AKPKIADYPFTTL PNLG+ Y+ + AD+PG+++ AH G G+G +FL+H +R Sbjct: 181 VVSAAKPKIADYPFTTLVPNLGVCNLDYRTTVFADVPGLLEGAHAGVGLGHQFLRHCQRC 240 Query: 238 HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 +L+H+V + Y+ I EL +N +L K ++V +++D DS Sbjct: 241 RLLVHVVDGTSPDPMGDYRAIRQELELFNPQLAAKPQVVAYNKMDVPDS 289 >gi|109900037|ref|YP_663292.1| GTPase ObgE [Pseudoalteromonas atlantica T6c] gi|122971562|sp|Q15PF0|OBG_PSEA6 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|109702318|gb|ABG42238.1| GTP1/OBG subdomain [Pseudoalteromonas atlantica T6c] Length = 397 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 145/337 (43%), Positives = 221/337 (65%), Gaps = 10/337 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGGAG +SFRREK++ GGPDGG GG GG V++ A NLNTLID+R Sbjct: 1 MKFVDEAEIRVEAGDGGAGTVSFRREKYVPDGGPDGGDGGDGGSVYLVADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ +A+ G+ G + +G KG D+ + VPVGT+ + + L+ DL + GQR+ A G Sbjct: 61 FERFHRAERGKNGQSADCTGRKGADLEVKVPVGTRATDTETGELLGDLTKHGQRLKAAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FK+STN+AP G G +++ L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GYHGLGNARFKTSTNRAPRQKTLGTPGDVRMLKLELMLLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V+ + F++ADIPG+I+ A +GAG+G +FLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPNLGVVRLDAMSSFVIADIPGLIEGASEGAGLGIQFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARK 292 LLH++ + + V A + I+ EL Y+ +L K + +++D + ++ L +K Sbjct: 241 LLHLIDLMPADGSDPVDNA-KAIVTELEKYSPKLAAKPRWLVFNKVDLMFEDEAQDLCKK 299 Query: 293 KNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 + G+ + S++ G ++ + D I S+ Sbjct: 300 IADAMNWEGEY-YSISAVQGKNTKELCIKVMDFIESL 335 >gi|296313542|ref|ZP_06863483.1| Obg family GTPase CgtA [Neisseria polysaccharea ATCC 43768] gi|296839926|gb|EFH23864.1| Obg family GTPase CgtA [Neisseria polysaccharea ATCC 43768] Length = 336 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 142/292 (48%), Positives = 208/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETANPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|71909084|ref|YP_286671.1| GTPase ObgE [Dechloromonas aromatica RCB] gi|123626582|sp|Q47AD0|OBG_DECAR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|71848705|gb|AAZ48201.1| Small GTP-binding protein domain [Dechloromonas aromatica RCB] Length = 363 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 146/338 (43%), Positives = 226/338 (66%), Gaps = 13/338 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+YI++GDGG G +FRREK+I GGP+GG GGRGG ++ A N+NTL+D+R Sbjct: 1 MKFIDEAKIYIKAGDGGNGAATFRREKYIPMGGPNGGDGGRGGSIYAVADRNINTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F + GE G ++ GA G+D++L +PVGT ++ + +I DL + Q++++A G Sbjct: 61 YTRKFIGKRGENGGGADQYGAGGDDIILRMPVGTVIYNLNTEEIIADLSEHDQKVMIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+E + L+L+++AD+G++GLPNAGKST + +++ Sbjct: 121 GKGGLGNIHFKSSTNRAPRQKTNGEQGEELELRLELRVLADVGLLGLPNAGKSTLIRAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL+PNLG+V+ + K F++AD+PG+I+ A GAG+G RFLKH +RT + Sbjct: 181 SARPKVADYPFTTLHPNLGVVRVDDEKSFVMADVPGLIEGAADGAGLGIRFLKHLQRTRI 240 Query: 240 LLHIVSAL-----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKK 293 LLH+V + V+ A + I+ EL ++ +L K + L+++D + + D A K Sbjct: 241 LLHLVDIAPIDPDSDPVRDA-KAIVGELIKHDPDLANKPRWLVLNKLDLIPEEDREAAVK 299 Query: 294 N-----ELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 N + AT+ F ++I G G ++ + + + Sbjct: 300 NFIKAYKKATKYDGPVFPIAAINGEGTKPLIYAISEAL 337 >gi|255037838|ref|YP_003088459.1| GTPase ObgE [Dyadobacter fermentans DSM 18053] gi|254950594|gb|ACT95294.1| GTP-binding protein Obg/CgtA [Dyadobacter fermentans DSM 18053] Length = 335 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 155/329 (47%), Positives = 216/329 (65%), Gaps = 9/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ RSG+GGAG + FRREK +E GGPDGG GGRGG V ++ + L TL+ +Y Sbjct: 6 FIDYVKINARSGNGGAGSMHFRREKHVEKGGPDGGDGGRGGHVILKGNAQLWTLLHLKYT 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA G+ G R+GA G+D++L VP+GT + + ++ ++GQ +IL GG Sbjct: 66 KHVKAFDGKGGEGGRRTGAIGKDIILEVPLGTIAKNAETGEQLFEITEDGQEMILLRGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKS+TNQ P YA PG G+E+ L+LK++AD+G++G PNAGKST L+ V+ A Sbjct: 126 GGMGNDHFKSATNQTPQYAQPGEPGKEEWFILELKVLADVGLVGFPNAGKSTLLSVVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IADYPFTTL PNLG+V YK F++ADIPGII+ A QG G+G RFL+H ER +LL Sbjct: 186 KPEIADYPFTTLVPNLGVVPYRDYKSFVMADIPGIIEGASQGKGLGLRFLRHIERNSILL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELATQC 300 +V A E+++A YQ ++ EL YN +L K I+ +S++D + D + L + N Sbjct: 246 FLVPATSEDIEAEYQTLVQELRLYNPQLLDKSRILAISKMDVLSDEERLTLQDN---LPN 302 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSI 329 G S+IT G+ Q L DKI+ + Sbjct: 303 GIPALLISAITQEGVEQ----LKDKIWEL 327 >gi|254804104|ref|YP_003082325.1| probable GTP-binding protein [Neisseria meningitidis alpha14] gi|254667646|emb|CBA03456.1| probable GTP-binding protein [Neisseria meningitidis alpha14] Length = 384 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 142/292 (48%), Positives = 208/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PN GKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNVGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|220905509|ref|YP_002480821.1| GTPase ObgE [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|261266821|sp|B8J4L3|OBG_DESDA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|219869808|gb|ACL50143.1| GTP-binding protein Obg/CgtA [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 366 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 146/315 (46%), Positives = 215/315 (68%), Gaps = 12/315 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA++ +R+G GG G +SFRREKF+ GGPDGG+GG GG V+++A + L +L DFR Sbjct: 1 MRFVDEARIQVRAGKGGHGCLSFRREKFVPRGGPDGGNGGDGGSVYLRADNRLLSLYDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEE--DGISLICDLDQEGQRIILA 118 ++ ++AQ+G G G KGE++VL +PVGT V+ E +G L+ DL + +++A Sbjct: 61 LKRLYEAQNGRPGEGSQCDGRKGENLVLNLPVGTLVYAEGPEGEVLVADLSEPDAEVLVA 120 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GN HFKSST +AP ++ PG G+E + L+LK++AD G+IGLPNAGKSTF++ Sbjct: 121 SGGRGGKGNEHFKSSTMRAPRFSQPGEPGEEFNLRLELKILADAGLIGLPNAGKSTFISQ 180 Query: 179 VTRAKPKIADYPFTTLYPNLGIVKEGY---KEFILADIPGIIKNAHQGAGIGDRFLKHTE 235 V+ A+PKIA YPFTTL PNLG++ + + ++ADIPG+I+ AH+G G+G RFLKH E Sbjct: 181 VSAARPKIAAYPFTTLTPNLGVMIDEVDPDRRMVIADIPGLIEGAHEGQGLGLRFLKHVE 240 Query: 236 RTHVLLHIVSAL---EENVQAAYQCILDELSAYNSEL--RKKIEIVGLSQIDTVDSDTLA 290 RT L+HI+S +E+ A + + +EL +++EL R++IE+V ++ID V + L Sbjct: 241 RTRFLVHILSIEDVGDEDPWAGFSLVNEELRRFDAELGERRQIEVV--NKIDLVSPERLE 298 Query: 291 RKKNELATQCGQVPF 305 K +V F Sbjct: 299 ALKERARADGREVYF 313 >gi|325920796|ref|ZP_08182697.1| GTP-binding protein Obg/CgtA [Xanthomonas gardneri ATCC 19865] gi|325548693|gb|EGD19646.1| GTP-binding protein Obg/CgtA [Xanthomonas gardneri ATCC 19865] Length = 350 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 150/322 (46%), Positives = 208/322 (64%), Gaps = 9/322 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MK +DEA++ + +G+GG G + FRREKFI GGPDGG GG GG VWI A N+NTL+DFR Sbjct: 1 MKLVDEAEILVSAGNGGNGCVGFRREKFIPLGGPDGGDGGSGGSVWIVADENVNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ FKAQ GE GM R G GED ++ VPVGT V +I DL Q G R+++A G Sbjct: 61 HERTFKAQRGENGMGRQAYGKGGEDRIIVVPVGTVVMNVQTDEIIGDLTQNGDRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + G G+E+++ L+LKL+AD+G++G PNAGKST + +V+ Sbjct: 121 GKGGLGNMHFKSSINRAPRQSTTGEEGEERLLKLELKLLADVGLLGFPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTLYPNLG+V E Y+ F++AD+PG+I+ A GAG+G +FL+H +RT + Sbjct: 181 SATPKVADYPFTTLYPNLGVVSVEAYRSFVIADVPGLIEGAADGAGLGTQFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQAA-----YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 LLH+V S +E V + + EL ++ EL K + L++ D + D Sbjct: 241 LLHLVDISPMEGGVDGVSPADQVRTLERELERHDPELLAKPRWLVLNKADLMFEDEARTA 300 Query: 293 KNELATQCGQV-PFEFSSITGH 313 + + G P+ S G Sbjct: 301 AEAIVAELGWTSPWYLVSALGR 322 >gi|124006929|ref|ZP_01691758.1| GTP-binding protein Obg/CgtA [Microscilla marina ATCC 23134] gi|123987382|gb|EAY27102.1| GTP-binding protein Obg/CgtA [Microscilla marina ATCC 23134] Length = 340 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 154/330 (46%), Positives = 215/330 (65%), Gaps = 7/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D KV RSG GGAG FRREK + GGPDGG GGRGG + ++ + L TL+ +YQ Sbjct: 6 FIDYVKVQCRSGHGGAGSSHFRREKHVPLGGPDGGDGGRGGHIILRGNAQLWTLLHLKYQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A G G RSGA+G+D++L VP+GT + + ++ ++GQ +IL PGG Sbjct: 66 KHITAGQGNPGEGAGRSGAQGKDIILEVPIGTVAKNAETGEVKLEVTEDGQEVILTPGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FKSSTNQ+P+YA PG G E+ + L+LK++AD+G++G PNAGKST L+ V+ A Sbjct: 126 GGLGNRNFKSSTNQSPHYAQPGETGVEEWVVLELKILADVGLVGFPNAGKSTLLSVVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL PNLG+V YK F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 KPEIANYAFTTLVPNLGVVAYRDYKSFVMADIPGIIEGAAEGKGLGLRFLRHIERNSILL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +VSA N++ Y+ +LDEL YN EL K I+ +S+ D +D + + L + Sbjct: 246 FLVSAENINIKEEYETLLDELRKYNPELLDKKRILAVSKADMLDEELEQEVQKILDNEIP 305 Query: 302 Q-VP-FEFSSITGHGIPQILECLHDKIFSI 329 + +P FSS+T G L+ L D I + Sbjct: 306 EDIPTLIFSSVTQKG----LDPLKDTIMRM 331 >gi|218781951|ref|YP_002433269.1| GTP-binding protein Obg/CgtA [Desulfatibacillum alkenivorans AK-01] gi|261266818|sp|B8FM68|OBG_DESAA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|218763335|gb|ACL05801.1| GTP-binding protein Obg/CgtA [Desulfatibacillum alkenivorans AK-01] Length = 336 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 154/331 (46%), Positives = 226/331 (68%), Gaps = 8/331 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + ++SGDGG G +SFRRE+FI GGPDGG+GG+GGDV + AT +TL FR Sbjct: 1 MKFVDEATLIVQSGDGGRGCVSFRRERFIPRGGPDGGNGGKGGDVVLVATRAKHTLYHFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+ F+AQ G G NR G GED+++ VPVGT V + + +I DL E +R I+ G Sbjct: 61 YKHRFQAQRGGYGSGANRHGKNGEDLLIEVPVGTIVRDAETSEIIADLSVEEERCIVCHG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF SST +AP +A G G+EK + L+LKL+AD+G++GLPNAGKS+ + ++T Sbjct: 121 GRGGKGNKHFTSSTYRAPRFAQDGEEGEEKTLKLELKLLADVGLVGLPNAGKSSLITALT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKI YPFTTL P+LG++++ Y E ++ADIPG+I+ A QGAG+G RFL+H ER + Sbjct: 181 AARPKIGAYPFTTLAPSLGVLQDPYGEPVVIADIPGLIEGAAQGAGLGHRFLRHIERNRL 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H++ A + E+ A+YQ I ELS+Y+ L +K +IV L+++D +++ A Sbjct: 241 LIHLIDASQVTAEDPLASYQAINKELSSYDQALGEKPQIVVLNKMDLPEAEEGA---CLF 297 Query: 297 ATQCGQVP-FEFSSITGHGIPQILECLHDKI 326 CG + + S+I G G+ +++E + ++ Sbjct: 298 KQSCGNLQVLQISAILGEGLDELIEAIFAQL 328 >gi|15803723|ref|NP_289757.1| GTPase ObgE [Escherichia coli O157:H7 EDL933] gi|15833316|ref|NP_312089.1| GTPase ObgE [Escherichia coli O157:H7 str. Sakai] gi|26249766|ref|NP_755806.1| GTPase ObgE [Escherichia coli CFT073] gi|110643423|ref|YP_671153.1| GTPase ObgE [Escherichia coli 536] gi|117625477|ref|YP_858800.1| GTPase ObgE [Escherichia coli APEC O1] gi|168754165|ref|ZP_02779172.1| GTP-binding protein Obg/CgtA [Escherichia coli O157:H7 str. EC4401] gi|168769039|ref|ZP_02794046.1| GTP-binding protein Obg/CgtA [Escherichia coli O157:H7 str. EC4486] gi|168781327|ref|ZP_02806334.1| GTP-binding protein Obg/CgtA [Escherichia coli O157:H7 str. EC4076] gi|168786069|ref|ZP_02811076.1| GTP-binding protein Obg/CgtA [Escherichia coli O157:H7 str. EC869] gi|188491854|ref|ZP_02999124.1| GTP-binding protein Obg/CgtA [Escherichia coli 53638] gi|191174476|ref|ZP_03035976.1| GTP-binding protein Obg/CgtA [Escherichia coli F11] gi|195938402|ref|ZP_03083784.1| GTPase ObgE [Escherichia coli O157:H7 str. EC4024] gi|208807561|ref|ZP_03249898.1| GTP-binding protein Obg/CgtA [Escherichia coli O157:H7 str. EC4206] gi|208813854|ref|ZP_03255183.1| GTP-binding protein Obg/CgtA [Escherichia coli O157:H7 str. EC4045] gi|208821993|ref|ZP_03262313.1| GTP-binding protein Obg/CgtA [Escherichia coli O157:H7 str. EC4042] gi|209399332|ref|YP_002272653.1| GTP-binding protein Obg/CgtA [Escherichia coli O157:H7 str. EC4115] gi|217327757|ref|ZP_03443840.1| GTP-binding protein Obg/CgtA [Escherichia coli O157:H7 str. TW14588] gi|218560253|ref|YP_002393166.1| GTPase ObgE [Escherichia coli S88] gi|227887904|ref|ZP_04005709.1| GTP-binding protein [Escherichia coli 83972] gi|237706065|ref|ZP_04536546.1| GTPase ObgE [Escherichia sp. 3_2_53FAA] gi|254038348|ref|ZP_04872406.1| GTPase ObgE [Escherichia sp. 1_1_43] gi|254795132|ref|YP_003079969.1| GTPase ObgE [Escherichia coli O157:H7 str. TW14359] gi|261228194|ref|ZP_05942475.1| GTPase involved in cell partioning and DNA repair [Escherichia coli O157:H7 str. FRIK2000] gi|261255050|ref|ZP_05947583.1| GTPase involved in cell partioning and DNA repair [Escherichia coli O157:H7 str. FRIK966] gi|291284557|ref|YP_003501375.1| GTP-binding protein Obg/CgtA [Escherichia coli O55:H7 str. CB9615] gi|293412555|ref|ZP_06655278.1| obg family GTPase CgtA [Escherichia coli B354] gi|293416613|ref|ZP_06659252.1| obg family GTPase CgtA [Escherichia coli B185] gi|300980037|ref|ZP_07174832.1| Obg family GTPase CgtA [Escherichia coli MS 200-1] gi|300990830|ref|ZP_07179357.1| Obg family GTPase CgtA [Escherichia coli MS 45-1] gi|301047973|ref|ZP_07195016.1| Obg family GTPase CgtA [Escherichia coli MS 185-1] gi|306816475|ref|ZP_07450607.1| GTPase ObgE [Escherichia coli NC101] gi|331659470|ref|ZP_08360412.1| Obg family GTPase CgtA [Escherichia coli TA206] gi|331674715|ref|ZP_08375474.1| Obg family GTPase CgtA [Escherichia coli TA280] gi|81846567|sp|Q8FD82|OBG_ECOL6 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|81848981|sp|Q8X9K7|OBG_ECO57 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|122957974|sp|Q0TCS7|OBG_ECOL5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266770|sp|B7MBV2|OBG_ECO45 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266772|sp|B5YS72|OBG_ECO5E RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266778|sp|A1AG86|OBG_ECOK1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|12517798|gb|AAG58317.1|AE005547_3 putative GTP-binding factor [Escherichia coli O157:H7 str. EDL933] gi|26110194|gb|AAN82380.1|AE016767_140 Hypothetical GTP-binding protein yhbZ [Escherichia coli CFT073] gi|13363535|dbj|BAB37485.1| putative GTP-binding factor [Escherichia coli O157:H7 str. Sakai] gi|110345015|gb|ABG71252.1| hypothetical GTP-binding protein YhbZ [Escherichia coli 536] gi|115514601|gb|ABJ02676.1| GTPase involved in cell partioning and DNA repair [Escherichia coli APEC O1] gi|188487053|gb|EDU62156.1| GTP-binding protein Obg/CgtA [Escherichia coli 53638] gi|189001085|gb|EDU70071.1| GTP-binding protein Obg/CgtA [Escherichia coli O157:H7 str. EC4076] gi|189358740|gb|EDU77159.1| GTP-binding protein Obg/CgtA [Escherichia coli O157:H7 str. EC4401] gi|189361859|gb|EDU80278.1| GTP-binding protein Obg/CgtA [Escherichia coli O157:H7 str. EC4486] gi|189374127|gb|EDU92543.1| GTP-binding protein Obg/CgtA [Escherichia coli O157:H7 str. EC869] gi|190905231|gb|EDV64870.1| GTP-binding protein Obg/CgtA [Escherichia coli F11] gi|208727362|gb|EDZ76963.1| GTP-binding protein Obg/CgtA [Escherichia coli O157:H7 str. EC4206] gi|208735131|gb|EDZ83818.1| GTP-binding protein Obg/CgtA [Escherichia coli O157:H7 str. EC4045] gi|208742116|gb|EDZ89798.1| GTP-binding protein Obg/CgtA [Escherichia coli O157:H7 str. EC4042] gi|209160732|gb|ACI38165.1| GTP-binding protein Obg/CgtA [Escherichia coli O157:H7 str. EC4115] gi|209758208|gb|ACI77416.1| putative GTP-binding factor [Escherichia coli] gi|209758210|gb|ACI77417.1| putative GTP-binding factor [Escherichia coli] gi|209758212|gb|ACI77418.1| putative GTP-binding factor [Escherichia coli] gi|209758214|gb|ACI77419.1| putative GTP-binding factor [Escherichia coli] gi|209758216|gb|ACI77420.1| putative GTP-binding factor [Escherichia coli] gi|217320124|gb|EEC28549.1| GTP-binding protein Obg/CgtA [Escherichia coli O157:H7 str. TW14588] gi|218367022|emb|CAR04793.1| GTPase involved in cell partioning and DNA repair [Escherichia coli S88] gi|222034900|emb|CAP77643.1| Uncharacterized GTP-binding protein yhbZ [Escherichia coli LF82] gi|226839972|gb|EEH71993.1| GTPase ObgE [Escherichia sp. 1_1_43] gi|226899105|gb|EEH85364.1| GTPase ObgE [Escherichia sp. 3_2_53FAA] gi|227835300|gb|EEJ45766.1| GTP-binding protein [Escherichia coli 83972] gi|254594532|gb|ACT73893.1| GTPase involved in cell partioning and DNA repair [Escherichia coli O157:H7 str. TW14359] gi|290764430|gb|ADD58391.1| GTP-binding protein Obg/CgtA [Escherichia coli O55:H7 str. CB9615] gi|291431969|gb|EFF04952.1| obg family GTPase CgtA [Escherichia coli B185] gi|291469326|gb|EFF11817.1| obg family GTPase CgtA [Escherichia coli B354] gi|294490485|gb|ADE89241.1| GTP-binding protein Obg/CgtA [Escherichia coli IHE3034] gi|300300158|gb|EFJ56543.1| Obg family GTPase CgtA [Escherichia coli MS 185-1] gi|300307866|gb|EFJ62386.1| Obg family GTPase CgtA [Escherichia coli MS 200-1] gi|300407050|gb|EFJ90588.1| Obg family GTPase CgtA [Escherichia coli MS 45-1] gi|305850040|gb|EFM50499.1| GTPase ObgE [Escherichia coli NC101] gi|307555277|gb|ADN48052.1| putative GTP-binding factor [Escherichia coli ABU 83972] gi|309703609|emb|CBJ02949.1| probable GTP-binding protein [Escherichia coli ETEC H10407] gi|312947740|gb|ADR28567.1| GTPase ObgE [Escherichia coli O83:H1 str. NRG 857C] gi|315288965|gb|EFU48363.1| Obg family GTPase CgtA [Escherichia coli MS 110-3] gi|315294882|gb|EFU54221.1| Obg family GTPase CgtA [Escherichia coli MS 153-1] gi|315297895|gb|EFU57165.1| Obg family GTPase CgtA [Escherichia coli MS 16-3] gi|320189536|gb|EFW64195.1| GTPase ObgE [Escherichia coli O157:H7 str. EC1212] gi|320194668|gb|EFW69298.1| GTPase ObgE [Escherichia coli WV_060327] gi|320640254|gb|EFX09826.1| GTPase CgtA [Escherichia coli O157:H7 str. G5101] gi|320645551|gb|EFX14560.1| GTPase CgtA [Escherichia coli O157:H- str. 493-89] gi|320650861|gb|EFX19318.1| GTPase CgtA [Escherichia coli O157:H- str. H 2687] gi|320656242|gb|EFX24154.1| GTPase CgtA [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661932|gb|EFX29340.1| GTPase CgtA [Escherichia coli O55:H7 str. USDA 5905] gi|320666767|gb|EFX33746.1| GTPase CgtA [Escherichia coli O157:H7 str. LSU-61] gi|323951298|gb|EGB47173.1| obg family protein GTPase CgtA [Escherichia coli H252] gi|323957670|gb|EGB53384.1| obg family protein GTPase CgtA [Escherichia coli H263] gi|324012136|gb|EGB81355.1| Obg family GTPase CgtA [Escherichia coli MS 60-1] gi|326337883|gb|EGD61717.1| GTPase ObgE [Escherichia coli O157:H7 str. 1125] gi|326347453|gb|EGD71178.1| GTPase ObgE [Escherichia coli O157:H7 str. 1044] gi|331054052|gb|EGI26081.1| Obg family GTPase CgtA [Escherichia coli TA206] gi|331068154|gb|EGI39550.1| Obg family GTPase CgtA [Escherichia coli TA280] Length = 390 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 143/306 (46%), Positives = 209/306 (68%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D K Sbjct: 241 LLHLIDIDPIDGTDPVENA-RIIISELEKYSQDLAAKPRWLVFNKIDLLDKVEAEEKAKA 299 Query: 296 LATQCG 301 +A G Sbjct: 300 IAEALG 305 >gi|303232163|ref|ZP_07318866.1| Obg family GTPase CgtA [Veillonella atypica ACS-049-V-Sch6] gi|302513269|gb|EFL55308.1| Obg family GTPase CgtA [Veillonella atypica ACS-049-V-Sch6] Length = 423 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 144/323 (44%), Positives = 221/323 (68%), Gaps = 6/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A+V++++GDGG G SFRREK++ GGP GG GG+G DV ++A N+NTL+DFRY+ Sbjct: 2 FIDRARVFVKAGDGGDGMSSFRREKYVPNGGPSGGDGGQGADVILKADKNINTLVDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA G G N+ G ED+++ VP+GT V +E+ + CDL +G I+A GG Sbjct: 62 RQFKAPKGGNGESANKHGRGAEDLIIPVPLGTVVKDEESGKVFCDLVHDGDTFIIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F SS+N+AP +A G G+E+ + L+LK++AD+G++G P+ GKS+ L V++A Sbjct: 122 GGRGNARFLSSSNRAPTFAEKGEPGEERWLQLELKVLADVGLLGYPSVGKSSILRKVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P++A Y FTTL P LG+V G + F+LADIPG+I+ A +G G+G FL+H ERT++L+ Sbjct: 182 QPEVAAYHFTTLTPVLGVVTLPGDRSFVLADIPGLIEGASEGVGLGHNFLRHVERTNILI 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H+ VS +E + + + I DEL Y+ +L K +IV L++ID V D DT+ K+ Sbjct: 242 HVLDVSGMEGRDPKVDFDAINDELRKYSEKLANKKQIVALNKIDLVFDDDTIPNTKSYFE 301 Query: 298 TQCGQVPFEFSSITGHGIPQILE 320 + +V F ++++G G+P+++E Sbjct: 302 DKGYEV-FLINALSGEGLPELME 323 >gi|254673453|emb|CBA08822.1| probable GTP-binding protein [Neisseria meningitidis alpha275] Length = 384 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 208/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AACPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|332752342|gb|EGJ82732.1| GTP-binding protein Obg/CgtA [Shigella flexneri 4343-70] gi|333000020|gb|EGK19603.1| GTP-binding protein Obg/CgtA [Shigella flexneri K-218] Length = 390 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 143/306 (46%), Positives = 209/306 (68%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D K Sbjct: 241 LLHLIDIDPIDGTDPVENA-RIIISELEKYSQDLAAKPRWLVFNKIDLLDKAEAEEKAKV 299 Query: 296 LATQCG 301 +A G Sbjct: 300 IAEALG 305 >gi|167627116|ref|YP_001677616.1| GTPase ObgE [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|261266793|sp|B0TWK7|OBG_FRAP2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|167597117|gb|ABZ87115.1| GTP-binding protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 334 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 141/304 (46%), Positives = 198/304 (65%), Gaps = 4/304 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE + +++G GG G +SFRREK++ GGPDGG GG GG ++++A N+NTLID+R Sbjct: 1 MRFVDEVVIKLQAGKGGNGCVSFRREKYVPRGGPDGGDGGHGGSIYLKADENVNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ + A++G G RN G GED+ L VPVGT VF+ + I ++ G+ + L G Sbjct: 61 YKREYYAENGRPGEGRNCYGKAGEDMYLIVPVGTSVFDLETNKKIGEVLNNGEILKLVSG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN HFKSSTNQAP G G+ K + L+L L+ADI ++GLPNAGKST + SV+ Sbjct: 121 GKRGIGNTHFKSSTNQAPRKFTLGEEGEYKEVRLELNLLADIALLGLPNAGKSTLIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PK+ADYPFTT+YP+LG+VK G F++ADIPG+I+ A +GAG+G RFLKH R + Sbjct: 181 EATPKVADYPFTTMYPHLGVVKVGVDSFVMADIPGVIEGAAEGAGLGLRFLKHLTRARCV 240 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH+V E + Y + EL Y+ EL K + +++ID + +D + K E Sbjct: 241 LHVVDICPFNESDPVENYFAVEKELKKYSEELYDKPRFLVINKIDLL-ADEVEEKCQEFV 299 Query: 298 TQCG 301 Q G Sbjct: 300 KQIG 303 >gi|266625377|ref|ZP_06118312.1| Obg family GTPase CgtA [Clostridium hathewayi DSM 13479] gi|288862717|gb|EFC95015.1| Obg family GTPase CgtA [Clostridium hathewayi DSM 13479] Length = 427 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 146/334 (43%), Positives = 216/334 (64%), Gaps = 8/334 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK++I+SG GG G +SFRRE ++ GGPDGG GG GGD+ + LNTL DFR Sbjct: 2 FADRAKIFIKSGKGGDGHVSFRRELYVPCGGPDGGDGGEGGDIIFEVDDGLNTLSDFRQV 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + AQ GE+G K+ G G D+++ VP GT + E + +I D+ E +R ++ GG Sbjct: 62 RKYAAQDGEQGGKKRCHGKNGSDLIVKVPEGTVIKEFESGKVIADMSGENRREVILKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+ + T QAP YA PG GQE + L+LK+IAD+G++G PN GKST L+ V+ A Sbjct: 122 GGQGNMHYATPTMQAPKYAQPGQSGQELWVQLELKVIADVGLVGFPNVGKSTLLSRVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL P+LG+V +G K F++ADIPG+I+ A +G G+G FL+H ERT VL+ Sbjct: 182 RPKIANYHFTTLNPHLGVVDIDGGKGFVMADIPGLIEGASEGVGLGHDFLRHIERTRVLV 241 Query: 242 HIVSALEENVQAAYQCIL---DELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKNE 295 H+V A + + IL EL AYN EL K+ +I+ ++ D + D D +A+ K E Sbjct: 242 HVVDAASTEGRDPIEDILAINKELEAYNPELMKRPQIIAANKTDVIYAGDEDPVAKLKAE 301 Query: 296 LATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 + +V + S+++G G+ ++L ++D + ++ Sbjct: 302 FEPKGIKV-YPISAVSGQGVKELLYAVYDLLQTV 334 >gi|82702940|ref|YP_412506.1| GTPase ObgE [Nitrosospira multiformis ATCC 25196] gi|123544286|sp|Q2Y807|OBG_NITMU RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|82411005|gb|ABB75114.1| Small GTP-binding protein domain [Nitrosospira multiformis ATCC 25196] Length = 354 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 140/325 (43%), Positives = 215/325 (66%), Gaps = 7/325 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MK++DEA +++ +G GG G +FRREK+I GGP GG GGRGG ++ A N+NTL+D+R Sbjct: 1 MKYIDEAIIHVIAGKGGDGVAAFRREKYIPKGGPSGGDGGRGGSIYAMADRNINTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + +A++GE G +R G D+VL +PVGT + E + DL Q Q+I+LA G Sbjct: 61 FARIHRAKNGENGQGSDRYGKSAHDIVLRMPVGTVITNEATGERVADLVQHDQKILLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+ P G G+E + L+LK++AD+G++G+PNAGKST + +++ Sbjct: 121 GTGGLGNLHFKSSTNRTPRQFTLGEPGEEADLKLELKVLADVGLLGMPNAGKSTLIRAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTT++P LG+V+ + + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKVADYPFTTMHPALGVVRVDQNRSFVMADIPGLIEGAAEGAGLGHRFLKHLARTRL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR--KK 293 LLH+V + L+E + Y+ IL+EL Y+ L +K + L+++D + + + KK Sbjct: 241 LLHVVDIAPLDEAIDPVYEAKAILEELRKYDEALYRKPRWLVLNKVDLLPENEREKICKK 300 Query: 294 NELATQCGQVPFEFSSITGHGIPQI 318 + + F S++TG G ++ Sbjct: 301 FIRSLRWKDKNFAISAMTGDGCKEL 325 >gi|16131073|ref|NP_417650.1| GTPase involved in cell partioning and DNA repair [Escherichia coli str. K-12 substr. MG1655] gi|89109946|ref|AP_003726.1| GTPase involved in cell partioning and DNA repair [Escherichia coli str. K-12 substr. W3110] gi|170082718|ref|YP_001732038.1| GTPase involved in cell partioning and DNA repair [Escherichia coli str. K-12 substr. DH10B] gi|238902285|ref|YP_002928081.1| GTPase involved in cell partioning and DNA repair [Escherichia coli BW2952] gi|256024242|ref|ZP_05438107.1| GTPase ObgE [Escherichia sp. 4_1_40B] gi|300948835|ref|ZP_07162902.1| Obg family GTPase CgtA [Escherichia coli MS 116-1] gi|300955769|ref|ZP_07168113.1| Obg family GTPase CgtA [Escherichia coli MS 175-1] gi|301025971|ref|ZP_07189454.1| Obg family GTPase CgtA [Escherichia coli MS 196-1] gi|301644895|ref|ZP_07244866.1| Obg family GTPase CgtA [Escherichia coli MS 146-1] gi|307139869|ref|ZP_07499225.1| GTPase ObgE [Escherichia coli H736] gi|331643881|ref|ZP_08345012.1| Obg family GTPase CgtA [Escherichia coli H736] gi|1176186|sp|P42641|OBG_ECOLI RecName: Full=GTPase ObgE/CgtA; AltName: Full=GTP-binding protein Obg gi|261266776|sp|B1XHF9|OBG_ECODH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|606121|gb|AAA57984.1| ORF_f390 [Escherichia coli str. K-12 substr. MG1655] gi|1789574|gb|AAC76215.1| GTPase involved in cell partioning and DNA repair [Escherichia coli str. K-12 substr. MG1655] gi|85675977|dbj|BAE77227.1| GTPase involved in cell partioning and DNA repair [Escherichia coli str. K12 substr. W3110] gi|169890553|gb|ACB04260.1| GTPase involved in cell partioning and DNA repair [Escherichia coli str. K-12 substr. DH10B] gi|238861390|gb|ACR63388.1| GTPase involved in cell partioning and DNA repair [Escherichia coli BW2952] gi|260447790|gb|ACX38212.1| GTP-binding protein Obg/CgtA [Escherichia coli DH1] gi|299879897|gb|EFI88108.1| Obg family GTPase CgtA [Escherichia coli MS 196-1] gi|300317364|gb|EFJ67148.1| Obg family GTPase CgtA [Escherichia coli MS 175-1] gi|300451691|gb|EFK15311.1| Obg family GTPase CgtA [Escherichia coli MS 116-1] gi|301076801|gb|EFK91607.1| Obg family GTPase CgtA [Escherichia coli MS 146-1] gi|315137769|dbj|BAJ44928.1| GTPase ObgE [Escherichia coli DH1] gi|315617266|gb|EFU97875.1| GTP-binding protein Obg/CgtA [Escherichia coli 3431] gi|331037352|gb|EGI09576.1| Obg family GTPase CgtA [Escherichia coli H736] Length = 390 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 143/306 (46%), Positives = 209/306 (68%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D K Sbjct: 241 LLHLIDIDPIDGTDPVENA-RIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKA 299 Query: 296 LATQCG 301 +A G Sbjct: 300 IAEALG 305 >gi|205354202|ref|YP_002228003.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|261263068|sp|B5REP9|OBG_SALG2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|205273983|emb|CAR38989.1| probable GTP-binding protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326629324|gb|EGE35667.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 390 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 143/306 (46%), Positives = 209/306 (68%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRDLLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D K Sbjct: 241 LLHLIDIDPIDGSDPVENA-RIIIGELEKYSQDLAAKPRWLVFNKIDLMDKTEAEEKAKA 299 Query: 296 LATQCG 301 +A G Sbjct: 300 IAEALG 305 >gi|16762063|ref|NP_457680.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143552|ref|NP_806894.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213029443|ref|ZP_03343890.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213425421|ref|ZP_03358171.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213582304|ref|ZP_03364130.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609407|ref|ZP_03369233.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646991|ref|ZP_03377044.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289825812|ref|ZP_06544980.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|81853209|sp|Q8Z3H1|OBG_SALTI RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|25295789|pir||AD0903 probable GTP-binding protein [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504366|emb|CAD07818.1| probable GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139187|gb|AAO70754.1| probable GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 390 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 143/306 (46%), Positives = 209/306 (68%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRDLLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D K Sbjct: 241 LLHLIDIDPIDGSDPVENA-RIIIGELEKYSQDLAAKPRWLVFNKIDLMDKSEAEEKAKA 299 Query: 296 LATQCG 301 +A G Sbjct: 300 IAEALG 305 >gi|329297301|ref|ZP_08254637.1| GTPase CgtA [Plautia stali symbiont] Length = 387 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 137/305 (44%), Positives = 207/305 (67%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+D+++ VPVGT+V ++ + D+ + Q++++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDIIVKVPVGTRVIDQGTGETLGDMTRHEQKLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTMGTPGEKRDLQLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ E + + IL EL Y+ +L +K + ++ D + + + + Sbjct: 241 LLHLIDIAPIDESDPVENARIILGELEKYSDKLYQKPRWLVFNKTDLLSREEAESRAKAI 300 Query: 297 ATQCG 301 A G Sbjct: 301 AEALG 305 >gi|313667583|ref|YP_004047867.1| GTP-binding protein [Neisseria lactamica ST-640] gi|313005045|emb|CBN86477.1| putative GTP-binding protein [Neisseria lactamica 020-06] Length = 384 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 142/292 (48%), Positives = 208/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTGEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETANPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|242310668|ref|ZP_04809823.1| GTPase ObgE [Helicobacter pullorum MIT 98-5489] gi|239523066|gb|EEQ62932.1| GTPase ObgE [Helicobacter pullorum MIT 98-5489] Length = 362 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 139/283 (49%), Positives = 195/283 (68%), Gaps = 2/283 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ SG GG G +SF REKF+ GGPDGG GG+GG+V+ N +TL FR Sbjct: 2 FVDRVEIFVSSGKGGEGAVSFHREKFVINGGPDGGDGGKGGNVYFVVDRNTDTLSHFRGH 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ+G+ G+ RN+ G KGED++++VP GTQVF+ + L+ DL +E Q+I+ GG Sbjct: 62 KHFKAQNGKPGLGRNKYGKKGEDLIISVPPGTQVFDVESGKLLLDLLEESQKILFLEGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+TNQ P YA G+ G EK I L+LKLIAD+G++G PN GKST ++ ++ A Sbjct: 122 GGLGNAHFKSATNQRPTYAQKGMPGVEKNIRLELKLIADVGLVGFPNVGKSTLVSVLSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P+LGIV G Y+ F++ADIPGII A +G G+G FL+H ERT LL Sbjct: 182 KPEIANYEFTTLIPSLGIVNVGDYQSFVIADIPGIIGGASEGKGLGLEFLRHIERTRFLL 241 Query: 242 HIVS-ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT 283 ++ A ++ + + EL ++ EL + + LS+ DT Sbjct: 242 FVLDIANYRDINTQFDILQKELKNFSQELAMRPFGIMLSKSDT 284 >gi|161506135|ref|YP_001573247.1| GTPase ObgE [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|261263065|sp|A9MP23|OBG_SALAR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|160867482|gb|ABX24105.1| hypothetical protein SARI_04323 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 391 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 143/306 (46%), Positives = 209/306 (68%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRDLLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D K Sbjct: 241 LLHLIDIDPIDGSDPVENA-RIIIGELEKYSQDLAAKPRWLVFNKIDLMDKTEAEEKAKS 299 Query: 296 LATQCG 301 +A G Sbjct: 300 IAEALG 305 >gi|91212605|ref|YP_542591.1| GTPase ObgE [Escherichia coli UTI89] gi|122422290|sp|Q1R6F4|OBG_ECOUT RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|91074179|gb|ABE09060.1| putative GTP-binding factor [Escherichia coli UTI89] gi|307625218|gb|ADN69522.1| GTPase ObgE [Escherichia coli UM146] Length = 386 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 143/306 (46%), Positives = 209/306 (68%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D K Sbjct: 241 LLHLIDIDPIDGTDPVENA-RIIISELEKYSQDLAAKPRWLVFNKIDLLDKVEAEEKAKA 299 Query: 296 LATQCG 301 +A G Sbjct: 300 IAEALG 305 >gi|261400773|ref|ZP_05986898.1| Obg family GTPase CgtA [Neisseria lactamica ATCC 23970] gi|269209373|gb|EEZ75828.1| Obg family GTPase CgtA [Neisseria lactamica ATCC 23970] Length = 384 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 142/292 (48%), Positives = 208/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTGEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETANPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|219872096|ref|YP_002476471.1| GTPase ObgE [Haemophilus parasuis SH0165] gi|261266825|sp|B8F871|OBG_HAEPS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|219692300|gb|ACL33523.1| GTPase ObgE [Haemophilus parasuis SH0165] Length = 391 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 140/288 (48%), Positives = 197/288 (68%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREKFI GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRVEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F A GE G +G +G D+ L VPVGT+ + D +I DL + G ++++A G Sbjct: 61 FEKRFAAGRGENGRSAGCTGHRGSDITLRVPVGTRAIDNDTQEVIGDLTKHGMKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTNGTPGEKRDLQLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+ + G + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVARVGADRSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 L+H+V + E + I EL Y+ +L K + + ++IDT+ Sbjct: 241 LIHLVDIMPIDESDPAQNISIIESELYQYSEKLADKPQWLVFNKIDTI 288 >gi|167855043|ref|ZP_02477816.1| hypothetical GTP-binding protein [Haemophilus parasuis 29755] gi|167853781|gb|EDS25022.1| hypothetical GTP-binding protein [Haemophilus parasuis 29755] Length = 391 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 140/288 (48%), Positives = 197/288 (68%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREKFI GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRVEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F A GE G +G +G D+ L VPVGT+ + D +I DL + G ++++A G Sbjct: 61 FEKRFAAGRGENGRSAGCTGHRGNDITLRVPVGTRAIDNDTQEVIGDLTKHGMKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTNGTPGEKRDLQLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+ + G + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVARVGADRSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 L+H+V + E + I EL Y+ +L K + + ++IDT+ Sbjct: 241 LIHLVDIMPIDESDPAQNISIIESELYQYSEKLADKPQWLVFNKIDTI 288 >gi|319941773|ref|ZP_08016095.1| GTPase obg [Sutterella wadsworthensis 3_1_45B] gi|319804706|gb|EFW01573.1| GTPase obg [Sutterella wadsworthensis 3_1_45B] Length = 365 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 157/334 (47%), Positives = 221/334 (66%), Gaps = 8/334 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + ++ G GG G SFRREKFI GGPDGG GGRGG VW +A N+NTL+D++ Sbjct: 1 MKFVDEANIEVQGGKGGNGAASFRREKFIPKGGPDGGDGGRGGSVWAEADRNINTLVDYQ 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F A +GE G + GA G+DVVL +PVGT + + D ++ DL+ G R +LA G Sbjct: 61 YTRKFFAPNGENGRGADCYGAGGKDVVLRMPVGTIIRDTDTGEIVADLNVHGARQLLAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP PG GQ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNLHFKSSVNRAPRQFTPGEPGQYRSLELELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+P+LG+V+ G ++ F+LAD+PG+I+ A +GAG+G FL+H RT V Sbjct: 181 NARPKIADYPFTTLHPHLGVVRVGPEQSFVLADVPGLIEGAAEGAGLGHLFLRHLSRTKV 240 Query: 240 LLHIVSA--LEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARK 292 LLH++ A L++ V Q ++ EL Y+ EL K V L+++D V + D L K Sbjct: 241 LLHVIDAAPLDDTVDPFEQAHALVAELEKYDPELAAKPRWVVLNKMDLVPEEERDALVEK 300 Query: 293 KNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + G+ F S+ T G+ +L L K+ Sbjct: 301 FRSAFAREGEPVFAVSAATREGLTTLLNALAQKV 334 >gi|21242004|ref|NP_641586.1| GTPase ObgE [Xanthomonas axonopodis pv. citri str. 306] gi|294627041|ref|ZP_06705631.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666942|ref|ZP_06732172.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|81804106|sp|Q8PN23|OBG_XANAC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|21107401|gb|AAM36122.1| GTP-binding protein [Xanthomonas axonopodis pv. citri str. 306] gi|292598703|gb|EFF42850.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603314|gb|EFF46735.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 355 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 155/327 (47%), Positives = 210/327 (64%), Gaps = 14/327 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MK +DEA++ + +G+GG G + FRREKFI GGPDGG GG GG VWI A N+NTL+DFR Sbjct: 1 MKLVDEAEILVTAGNGGNGCVGFRREKFIPLGGPDGGDGGAGGSVWIVADENVNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ FKAQ GE GM R G GED ++ VPVGT V +I DL Q G R+++A G Sbjct: 61 HERTFKAQRGENGMGRQAYGKGGEDRIIVVPVGTVVINVQTDEVIGDLTQHGDRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP A G G+E+++ L+LKL+AD+G++G PNAGKST + +V+ Sbjct: 121 GKGGLGNMHFKSSVNRAPRQATTGEEGEERLLKLELKLLADVGLLGFPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTLYPNLG+V E Y+ F++AD+PG+I+ A GAG+G +FL+H +RT + Sbjct: 181 AATPKVADYPFTTLYPNLGVVSVEAYRSFVIADVPGLIEGAADGAGLGTQFLRHLQRTRL 240 Query: 240 LLHIVS---AL-------EENVQAAYQC--ILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V AL + V A Q I EL ++ EL KK + L++ D + D Sbjct: 241 LLHLVDISPALGVYGEGGVDGVSPADQVRTIERELERHDPELLKKPRWLVLNKADLMFED 300 Query: 288 TLARKKNELATQCG-QVPFEFSSITGH 313 + + G P+ S G Sbjct: 301 EARAAAETIVAELGWTAPWYLVSALGR 327 >gi|303258210|ref|ZP_07344217.1| Obg family GTPase CgtA [Burkholderiales bacterium 1_1_47] gi|302858963|gb|EFL82047.1| Obg family GTPase CgtA [Burkholderiales bacterium 1_1_47] Length = 370 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 155/337 (45%), Positives = 226/337 (67%), Gaps = 7/337 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKFI GGPDGG GGRGG ++ A NLNTLID+R Sbjct: 1 MKFVDEAKIEVFAGKGGNGVASFRREKFIPKGGPDGGDGGRGGSIYAVADRNLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+A++GE G + G D+ L VPVGT + + D I DLD+ G++ +LA G Sbjct: 61 YTRKFQAKNGENGRGSDCYGRGAPDIELRVPVGTVITDLDTGETIADLDKNGEKALLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFK+STN+AP PG GQE+ + L+L+++AD+G++GLPNAGKST +++V+ Sbjct: 121 GKGGLGNLHFKTSTNRAPRQCTPGEPGQERTLKLELRVLADVGLLGLPNAGKSTLISAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKP+IADYPFTTL+P+LG+V+ G + F++ADIPG+I+ A +GAG+G +FL+H RT + Sbjct: 181 NAKPRIADYPFTTLHPHLGVVRAGPESSFVIADIPGLIEGASEGAGLGHQFLRHLSRTSL 240 Query: 240 LLHIVSA----LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ EE+ +A + I++EL ++ L +K V L+++D V + A N+ Sbjct: 241 LLHVIDVAPLDTEEDPISAARAIVEELRKFDPALAEKPRWVVLNKMDLVPEEDRAAVVNK 300 Query: 296 LATQCG-QVP-FEFSSITGHGIPQILECLHDKIFSIR 330 G VP F S++T G +++ + + I R Sbjct: 301 YRDAFGTDVPMFAISAVTREGTEALVKAIAEDIHEQR 337 >gi|183600355|ref|ZP_02961848.1| hypothetical protein PROSTU_03918 [Providencia stuartii ATCC 25827] gi|188020146|gb|EDU58186.1| hypothetical protein PROSTU_03918 [Providencia stuartii ATCC 25827] Length = 390 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 141/305 (46%), Positives = 211/305 (69%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +GDGG G +SFRREK+I GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFVDEAKILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+D+ + VPVGT++ + ++ D+ + QR ++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGQDITIKVPVGTRIRDLGTGEILGDMTRHEQRQMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQRTMGTPGETRELMLELMLLADVGMLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ E + + I+ EL Y+ +L +K + +++D + + A++ E+ Sbjct: 241 LLHLIDICPIDESDPVENAKIIISELEKYSEKLAEKPRWLVFNKVDILGPEESAKRAAEI 300 Query: 297 ATQCG 301 A G Sbjct: 301 AKAMG 305 >gi|16766597|ref|NP_462212.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56415230|ref|YP_152305.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62181809|ref|YP_218226.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161616310|ref|YP_001590275.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167552051|ref|ZP_02345804.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168231911|ref|ZP_02656969.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168238002|ref|ZP_02663060.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168243136|ref|ZP_02668068.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168262688|ref|ZP_02684661.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168463475|ref|ZP_02697392.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819631|ref|ZP_02831631.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444474|ref|YP_002042559.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448033|ref|YP_002047330.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194468976|ref|ZP_03074960.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194738014|ref|YP_002116251.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197249605|ref|YP_002148226.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265678|ref|ZP_03165752.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197364160|ref|YP_002143797.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243009|ref|YP_002217274.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200387836|ref|ZP_03214448.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204931185|ref|ZP_03221979.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207858549|ref|YP_002245200.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224585097|ref|YP_002638896.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238910095|ref|ZP_04653932.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|81309581|sp|Q57JG7|OBG_SALCH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|81821557|sp|Q5PLB7|OBG_SALPA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|81853670|sp|Q8ZLS5|OBG_SALTY RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263063|sp|B5F6V2|OBG_SALA4 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263066|sp|B5FIN3|OBG_SALDC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263067|sp|B5R0H4|OBG_SALEP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263069|sp|B4TJ21|OBG_SALHS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263070|sp|B4T714|OBG_SALNS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263071|sp|A9N750|OBG_SALPB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263072|sp|C0PZJ5|OBG_SALPC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263073|sp|B5BGK7|OBG_SALPK RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263074|sp|B4TWF3|OBG_SALSV RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|16421859|gb|AAL22171.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56129487|gb|AAV78993.1| probable GTP-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62129442|gb|AAX67145.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161365674|gb|ABX69442.1| hypothetical protein SPAB_04118 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194403137|gb|ACF63359.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406337|gb|ACF66556.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194455340|gb|EDX44179.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713516|gb|ACF92737.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195633344|gb|EDX51758.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095637|emb|CAR61205.1| probable GTP-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213308|gb|ACH50705.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243933|gb|EDY26553.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289088|gb|EDY28457.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937525|gb|ACH74858.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199604934|gb|EDZ03479.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204319952|gb|EDZ05158.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205323187|gb|EDZ11026.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205333853|gb|EDZ20617.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337846|gb|EDZ24610.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343332|gb|EDZ30096.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348439|gb|EDZ35070.1| GTP-binding protein Obg/CgtA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206710352|emb|CAR34710.1| probable GTP-binding protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224469625|gb|ACN47455.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261248466|emb|CBG26303.1| probable GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995500|gb|ACY90385.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159850|emb|CBW19369.1| probable GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914327|dbj|BAJ38301.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087746|emb|CBY97510.1| Uncharacterized GTP-binding protein BU389 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322615305|gb|EFY12226.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618336|gb|EFY15227.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622859|gb|EFY19703.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626819|gb|EFY23616.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631388|gb|EFY28148.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635345|gb|EFY32059.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643344|gb|EFY39908.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647084|gb|EFY43585.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648887|gb|EFY45332.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655079|gb|EFY51390.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657682|gb|EFY53950.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664178|gb|EFY60376.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667461|gb|EFY63623.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674709|gb|EFY70801.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675658|gb|EFY71731.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682294|gb|EFY78317.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684897|gb|EFY80895.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716297|gb|EFZ07868.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323131661|gb|ADX19091.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195898|gb|EFZ81069.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199015|gb|EFZ84112.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204285|gb|EFZ89294.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207632|gb|EFZ92579.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211315|gb|EFZ96159.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214743|gb|EFZ99492.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221223|gb|EGA05649.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224036|gb|EGA08329.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230315|gb|EGA14434.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233291|gb|EGA17385.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239328|gb|EGA23378.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242421|gb|EGA26447.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246931|gb|EGA30897.1| GTPase CgtA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254136|gb|EGA37956.1| GTPase CgtA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255253|gb|EGA39030.1| GTPase CgtA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262716|gb|EGA46272.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264026|gb|EGA47534.1| GTPase CgtA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269412|gb|EGA52867.1| GTPase CgtA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625052|gb|EGE31397.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332990159|gb|AEF09142.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 390 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 143/306 (46%), Positives = 209/306 (68%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRDLLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D K Sbjct: 241 LLHLIDIDPIDGSDPVENA-RIIIGELEKYSQDLAAKPRWLVFNKIDLMDKTEAEEKAKA 299 Query: 296 LATQCG 301 +A G Sbjct: 300 IAEALG 305 >gi|218767346|ref|YP_002341858.1| GTPase ObgE [Neisseria meningitidis Z2491] gi|261277703|sp|A1IPH6|OBG_NEIMA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|121051354|emb|CAM07645.1| putative GTP-binding protein [Neisseria meningitidis Z2491] Length = 384 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 208/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D + DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTGENVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGEARSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|238783528|ref|ZP_04627550.1| Uncharacterized GTP-binding protein yhbZ [Yersinia bercovieri ATCC 43970] gi|238715583|gb|EEQ07573.1| Uncharacterized GTP-binding protein yhbZ [Yersinia bercovieri ATCC 43970] Length = 391 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 143/306 (46%), Positives = 215/306 (70%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGD+++ A NLNTLID+ Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDIYLLADENLNTLIDYH 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F+A+ G+ G R+ +G +G+D+ + VPVGT++ ++ ++ D+ + GQR+++A G Sbjct: 61 FVKSFRAERGQNGQSRDCTGKRGKDITIKVPVGTRILDQGTGEIVGDMTRHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GFHGLGNARFKSSVNRAPRQKTMGTEGETRDLTLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ Y++ F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVRMDYEQSFVVADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIV--SALEEN--VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + ++E+ VQ A + I++EL Y+ L +K + ++ID VD + + Sbjct: 241 LLHLVDLAPIDESDPVQNA-KIIINELQQYSENLAEKPRWLVFNKIDLVDPEEAETRAKA 299 Query: 296 LATQCG 301 + G Sbjct: 300 IVEALG 305 >gi|288574867|ref|ZP_06393224.1| GTP-binding protein Obg/CgtA [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570608|gb|EFC92165.1| GTP-binding protein Obg/CgtA [Dethiosulfovibrio peptidovorans DSM 11002] Length = 433 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 142/336 (42%), Positives = 220/336 (65%), Gaps = 7/336 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D + + +G GG G +SFRREKF+ GGPDGG+GGRGG ++++AT++L+TL DF Sbjct: 1 MKFVDIVTIQVAAGRGGNGCMSFRREKFVPKGGPDGGNGGRGGHIFLEATTDLHTLADFE 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +H + +G G + GA DVV+ VP GT VF+++ + DL + G R ++A G Sbjct: 61 YSRHISSDNGAHGQGAKKFGANASDVVIKVPCGTIVFDKETGEPLADLVEPGDRCLVARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAHF +S +AP ++ G G+++ I ++LKLIAD+ ++G+PNAGKS+ LA+++ Sbjct: 121 GRGGKGNAHFANSRRRAPRFSEKGEDGEKRKITMELKLIADVALVGVPNAGKSSLLAAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PKIADYPFTTL PNLG+++ + ++ADIPG+I+ AHQ G+G FL+H ERT V+ Sbjct: 181 NATPKIADYPFTTLSPNLGVMRIDQDKIVVADIPGLIEGAHQNRGLGHYFLRHIERTRVI 240 Query: 241 LHIV---SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +H++ S E+V ++ +LDE AYN++L ++ IV ++ID + L + E Sbjct: 241 VHVLDLSSGSLESVVNQWKTVLDEFQAYNADLLERPYIVVGNKIDIDSARNLIDQTYEFF 300 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 +Q S+++G G+ + + D I S+ E+ Sbjct: 301 SQRDIRFIATSALSGEGVQEFM----DHIVSLSREH 332 >gi|212638542|ref|YP_002315062.1| GTPase ObgE [Anoxybacillus flavithermus WK1] gi|261266658|sp|B7GIR2|OBG_ANOFW RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|212560022|gb|ACJ33077.1| Spo0B-associated GTPase Obg [Anoxybacillus flavithermus WK1] Length = 428 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 147/328 (44%), Positives = 221/328 (67%), Gaps = 9/328 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G ++FRREK++ GGP GG GG+GGDV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGKGGDVVFVVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM +N+ G ED+++ VP GT V +++ +I DL + GQR ++A GG Sbjct: 62 RHFKAPRGEHGMSKNQHGKNAEDLIVKVPPGTVVIDDETKEVIADLTEHGQRFVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F +++N AP A G GQE+ + L+LKL+AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNTRFATASNPAPEIAENGEPGQERYVTLELKLLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTT+ PNLG+V+ E + F++AD+PG+I+ AHQG G+G +FL+H ERT V++ Sbjct: 182 KPKIADYHFTTIVPNLGVVETEDGRSFVMADLPGLIEGAHQGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT-LARKKNELA 297 H++ +A+E + Y I +EL YN L ++ +I+ +++D +++ L + K +L Sbjct: 242 HVIDMAAIEGRDPYEDYVVINEELKQYNLRLTERPQIIVANKMDMPNAEEHLQQFKQKLN 301 Query: 298 TQCGQVP-FEFSSITGHGIPQILECLHD 324 VP F S++T GI ++L + D Sbjct: 302 E---DVPIFPISAVTRQGIRELLFAIAD 326 >gi|325143497|gb|EGC65818.1| GTP-binding protein Obg/CgtA [Neisseria meningitidis M01-240013] Length = 384 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 142/292 (48%), Positives = 207/292 (70%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D + DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDETVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETANPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|149378268|ref|ZP_01895979.1| GTPase ObgE [Marinobacter algicola DG893] gi|149357433|gb|EDM45944.1| GTPase ObgE [Marinobacter algicola DG893] Length = 398 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 141/295 (47%), Positives = 204/295 (69%), Gaps = 12/295 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G +SFRREK++ GGPDGG GG GG V+++A S LNTLID+R Sbjct: 1 MKFVDEATIIVEAGKGGHGCLSFRREKYVPKGGPDGGDGGDGGSVYLEADSALNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ KA++G+ G RN +G KG D+VL VPVGT V + D ++ DL + G+R+ +A Sbjct: 61 FQRKHKAENGQPGSGRNCTGIKGNDLVLPVPVGTTVVDMDTHEVLGDLTRAGERLKVAQA 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+LK++AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQTTKGSEGELRNLRLELKVLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V + ++ F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKVADYPFTTLVPNLGVVSVQAHQSFVIADIPGLIEGAAEGAGLGIRFLKHLVRTRL 240 Query: 240 LLHIV-------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V S+ E+V+A I EL ++ L + + L+++D V + Sbjct: 241 LLHLVDVAPYDGSSPVESVRA----IEYELEKFSETLASRERWLVLNKVDMVSEE 291 >gi|291615997|ref|YP_003518739.1| YhbZ [Pantoea ananatis LMG 20103] gi|291151027|gb|ADD75611.1| YhbZ [Pantoea ananatis LMG 20103] gi|327396249|dbj|BAK13671.1| GTPase YhbZ [Pantoea ananatis AJ13355] Length = 390 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 137/305 (44%), Positives = 207/305 (67%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVFLVADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+D+ + VPVGT+V ++ + D+ + Q +++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDITVKVPVGTRVIDQGTGETLGDMTRHQQTLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N++P G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRSPRQKTMGTPGEKRDLQLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEQSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ E + + IL EL Y+ +L K + +++D +D + + + Sbjct: 241 LLHLIDIAPIDESDPVENARIILGELEKYSDKLFNKPRWLVFNKVDLIDEEEAQARAKAI 300 Query: 297 ATQCG 301 A G Sbjct: 301 AEALG 305 >gi|300718595|ref|YP_003743398.1| GTP-binding protein [Erwinia billingiae Eb661] gi|299064431|emb|CAX61551.1| Putative GTP-binding protein [Erwinia billingiae Eb661] Length = 395 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 138/305 (45%), Positives = 206/305 (67%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFVDEATILVAAGDGGNGCVSFRREKYIPRGGPDGGDGGDGGDVYMQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+++ G+ G R+ +G +G+D+++ VPVGT++ ++ + D+ GQ ++A G Sbjct: 61 FEKSFRSERGQNGQSRDCTGKRGQDIIIKVPVGTRIIDQGTGETLGDMMTHGQIQMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN+ FKSS N++P G G+ + I L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNSRFKSSVNRSPRQKTMGTKGEVRDIQLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDTEQSFVIADIPGLIEGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH + E + + IL EL Y+ +L K + +++D +D + + + Sbjct: 241 LLHTIDLAPIDESDPIENARIILGELEKYSEKLFNKPRWLVFNKVDLLDQEEAESRAKAI 300 Query: 297 ATQCG 301 A G Sbjct: 301 ADALG 305 >gi|145344311|ref|XP_001416679.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144576905|gb|ABO94972.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 457 Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 140/319 (43%), Positives = 211/319 (66%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+ D AK+Y+++GDGG G ++FRREKF+ GGP GG+GG GG V+I A N+N+L FR Sbjct: 1 MRCFDTAKIYVKAGDGGDGQVAFRREKFVPQGGPSGGNGGIGGAVYIVADKNMNSLDGFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + H +A+ G++G+ +G G D+ + VP GT + + ++I ++ + QR+++ G Sbjct: 61 KKVHHRAEAGKRGLGSKCAGRNGRDLEILVPPGTIIRDSRSKTIIAEITKAEQRVMVLAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FK++ N+AP A G G+E ++LKL+AD+GIIG+PNAGKST LASV+ Sbjct: 121 GRGGRGNASFKTAKNKAPMIAELGEKGREFWAEMELKLVADVGIIGIPNAGKSTLLASVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTT+ PNLG+V+ Y+ + ADIPG+++ A +G G+G FL+HT+RT VL Sbjct: 181 AAKPKIADYPFTTIVPNLGVVERDYERMVFADIPGLLEGASEGIGLGFEFLRHTKRTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +H++ E AY I EL ++ L +K EIV L+++D +++ A + E Sbjct: 241 IHVIDCASETCFEAYDAIRTELELFDEALLEKPEIVALNKVDDIEATERALQMKEKFDAE 300 Query: 301 GQVPFEFSSITGHGIPQIL 319 G S++TG G+ ++L Sbjct: 301 GISSHCVSAVTGEGVEELL 319 >gi|309379309|emb|CBX22082.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 384 Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 142/292 (48%), Positives = 208/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTGEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGNIHFKSSINRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDETANPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|127511805|ref|YP_001093002.1| GTPase ObgE [Shewanella loihica PV-4] gi|261263083|sp|A3QB95|OBG_SHELP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|126637100|gb|ABO22743.1| GTP1/OBG sub domain protein [Shewanella loihica PV-4] Length = 387 Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 132/245 (53%), Positives = 183/245 (74%), Gaps = 1/245 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG+G +SFRREK++ GGPDGG GG GG V++QA NLNTLID+R Sbjct: 1 MKFVDEAVIRVEAGDGGSGCVSFRREKYVPDGGPDGGDGGDGGSVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ GE G R+ +G G+D++L VPVGT+ +E+ + DL GQ++++A G Sbjct: 61 FERFHFAERGENGRGRDCTGHGGKDLILKVPVGTRAVDEETQEALGDLKTHGQKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSTNRAPRQKTLGTPGEVRSLRLELMLLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 RAKPK+ADYPFTTL PNLG+V + + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 RAKPKVADYPFTTLVPNLGVVTPRHGQSFVIADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIV 244 LLHI+ Sbjct: 241 LLHIL 245 >gi|161869109|ref|YP_001598275.1| GTPase ObgE [Neisseria meningitidis 053442] gi|261277702|sp|A9M061|OBG_NEIM0 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|161594662|gb|ABX72322.1| GTP-binding protein [Neisseria meningitidis 053442] Length = 384 Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 142/292 (48%), Positives = 209/292 (71%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKF+ GGPDGG GG+GG VW +A N NTL+++R Sbjct: 1 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A++GEKG +R GA +D+VL +PVGT + + D ++ DL GQR+ LA G Sbjct: 61 FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTYHGQRVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG G+ HFKSS N+AP + PG G+ + + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GKGGLGHIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + +E V A + I++EL Y+ EL K + L+++D +D + Sbjct: 241 LLHVVDLAPFDEAVDPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEE 292 >gi|121610833|ref|YP_998640.1| GTPase ObgE [Verminephrobacter eiseniae EF01-2] gi|261277733|sp|A1WPR5|OBG_VEREI RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|121555473|gb|ABM59622.1| GTP1/OBG sub domain protein [Verminephrobacter eiseniae EF01-2] Length = 363 Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 154/349 (44%), Positives = 231/349 (66%), Gaps = 15/349 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFR EK+ EFGGP+GG GGRGG V+ A NLNTL+DFR Sbjct: 1 MKFVDEAFIDVAAGDGGNGCVSFRHEKYKEFGGPNGGDGGRGGHVFAVADPNLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A+ G GM + GA G D+ L +PVGT + + + +L G+ I +A G Sbjct: 61 YARRHEAKRGGHGMGSDMFGAAGADITLKMPVGTIITDAATGQPLYELLLPGEVITIARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GGFGN FKS+ N+AP + PG G++K + L+LK++AD+G++G PNAGKSTF+A+V+ Sbjct: 121 GDGGFGNMRFKSAINRAPRHKTPGWPGEKKSLKLELKVLADVGLLGRPNAGKSTFIAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+P+LG+V+ ++ F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NARPKIADYPFTTLHPHLGVVRVAPEQSFVVADIPGLIEGASEGAGLGLQFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQ---------AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-D 287 LLHIV +AL+ V A + I++EL Y+ +L K + L+++D V + + Sbjct: 241 LLHIVDLAALDTGVDAQDAGVDPVAQAKAIINELKKYDRQLYDKPRWLVLNKLDMVPAGE 300 Query: 288 TLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHDKIFS-IRGENE 334 AR ++ + Q P FE S++T G ++ + + S R +NE Sbjct: 301 RQARVQDFVKRLKHQGPVFEISALTHEGCGPLVHAIFGHVQSGQRMDNE 349 >gi|297183900|gb|ADI20022.1| predicted GTPase [uncultured gamma proteobacterium EB000_65A11] Length = 413 Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 144/340 (42%), Positives = 218/340 (64%), Gaps = 21/340 (6%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G +SFRREK+I GGPDGG GG GG +++ ++LNTL+D+R Sbjct: 1 MKFVDEASIRVEAGKGGNGCLSFRREKYIAKGGPDGGDGGDGGSIYLVGDADLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q ++A+ GE G ++++GAKG+D+ L VP+GT +F+++ + D+ +E + I++A G Sbjct: 61 FQPRYRAKSGESGKGKDQTGAKGDDIYLRVPLGTSIFDDETGEYLGDVSEEKEEILVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP PG G+ K + L+LKL+AD+G++GLPNAGKST +++V+ Sbjct: 121 GFHGLGNVRFKSSTNRAPRQTKPGSPGELKNLRLELKLLADVGLLGLPNAGKSTLISAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V G F++ADIPG+I+ A GAG+G +FLKH RT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVTVGDDHSFVIADIPGLIEGAADGAGLGVQFLKHLSRTRL 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL------- 289 LLH++ + ++ I EL+ Y+ + K + L++ D + L Sbjct: 241 LLHLIDLAPMDGSDPVENFKIIERELAKYSEGIANKERWLVLTKTDLIPKGDLETRVAEI 300 Query: 290 --ARKKNELA--------TQCGQVPFEFSSITGHGIPQIL 319 A K + LA T+ + S++TG G Q++ Sbjct: 301 KAALKVDALAIETLDLEKTELDDHEYRISAVTGDGTRQLM 340 >gi|317475316|ref|ZP_07934582.1| obg family GTPase CgtA [Bacteroides eggerthii 1_2_48FAA] gi|316908570|gb|EFV30258.1| obg family GTPase CgtA [Bacteroides eggerthii 1_2_48FAA] Length = 393 Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 149/327 (45%), Positives = 212/327 (64%), Gaps = 7/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+I GGPDGG GGRGG V ++ N TL+ RY Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYIPNGGPDGGDGGRGGHVILRGNRNYWTLLHLRYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G GED V+ VP GT V+ + ICD+ + GQ ++L GG Sbjct: 66 RHIMAGHGESGSKNRSFGKDGEDKVIEVPCGTVVYNAETGEYICDVTEHGQEVVLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + ++LKL+AD+G++G PNAGKST L++V+ A Sbjct: 126 GGLGNWHFKTATRQAPRFAQPGEPMQEMTVIMELKLLADVGLVGFPNAGKSTLLSAVSSA 185 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA+YPFTTL PNLGIV ++G K F++ADIPGII+ A G G+G RFL+H ER +L Sbjct: 186 KPKIANYPFTTLEPNLGIVSYRDG-KSFVMADIPGIIEGASAGKGLGLRFLRHIERNSLL 244 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L +V A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 245 LFMVPADSDDIRKEYEILLNELRTFNPEMLDKQRVLAVTKCDMLDQELMDEIEPTLPE-- 302 Query: 301 GQVPFEF-SSITGHGIPQILECLHDKI 326 +P F S+I+G GI + + L +++ Sbjct: 303 -NIPHVFISAISGMGISALKDLLWEEL 328 >gi|33151508|ref|NP_872861.1| GTPase ObgE [Haemophilus ducreyi 35000HP] gi|81578242|sp|Q7VP37|OBG_HAEDU RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|33147728|gb|AAP95250.1| putative GTP-binding protein [Haemophilus ducreyi 35000HP] Length = 391 Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 150/332 (45%), Positives = 214/332 (64%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRVEAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ + A GE G +G +G D+ L VPVGT+ + D +I DL Q G ++++A G Sbjct: 61 FEKRYAAGRGENGRSAGCTGHRGNDITLRVPVGTRAIDNDTKEVIGDLTQHGMKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTNGTAGEKRDLLLELMLLADVGMLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+ + G + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVARVGSDRSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V + E + I EL Y+ +L K + ++IDT+ + A + + Sbjct: 241 LIHLVDIMPIDESDPVQNITVIESELYQYSEKLADKPTWLVFNKIDTIGEEIAAEQAKNI 300 Query: 297 ATQCGQVP--FEFSSITGHGIPQILECLHDKI 326 A Q G + S+ TG + Q+ + D I Sbjct: 301 AEQIGWQGDYYLISAATGQNVQQLTRDIMDFI 332 >gi|166713096|ref|ZP_02244303.1| GTPase ObgE [Xanthomonas oryzae pv. oryzicola BLS256] Length = 350 Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 151/322 (46%), Positives = 210/322 (65%), Gaps = 9/322 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MK +DEA++ + +G+GG G + FRREKFI GGPDGG GG GG VWI A N+NTL+DFR Sbjct: 1 MKLVDEAEILVTAGNGGNGCVGFRREKFIPLGGPDGGDGGSGGSVWIVADENVNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ FKAQ GE GM R G GED ++ VPVGT V +I DL + G R+++A G Sbjct: 61 HERTFKAQRGENGMGRQAYGKGGEDRIIVVPVGTVVINVQTDEVIGDLTRHGDRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + G G+E+++ L+LKL+AD+G++G PNAGKST + +V+ Sbjct: 121 GKGGLGNMHFKSSVNRAPRQSTTGEEGEERLLKLELKLLADVGLLGFPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTLYPNLG+V E Y+ F++AD+PG+I+ A GAG+G +FL+H +RT + Sbjct: 181 SATPKVADYPFTTLYPNLGVVSVEAYRSFVIADVPGLIEGAADGAGLGTQFLRHLQRTRL 240 Query: 240 LLHIVSALE-----ENVQAAYQC--ILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLAR 291 LLH+V + V A Q + EL ++ EL KK + L++ D + + D A Sbjct: 241 LLHLVDMAPMDGGVDGVSPADQVRTLERELERHDPELLKKPRWLVLNKADLMFEDDARAA 300 Query: 292 KKNELATQCGQVPFEFSSITGH 313 + +A P+ S G Sbjct: 301 AETIVAELGWTAPWYLVSALGR 322 >gi|332345140|gb|AEE58474.1| GTP-binding protein CgtA [Escherichia coli UMNK88] Length = 390 Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 142/302 (47%), Positives = 208/302 (68%), Gaps = 6/302 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D K Sbjct: 241 LLHLIDIDPIDGTDPVENA-RIIISELEKYSQDLAAKPRWLVFNKIDLLDKVEAEEKAKA 299 Query: 296 LA 297 +A Sbjct: 300 IA 301 >gi|118444767|ref|YP_878586.1| GTPase ObgE [Clostridium novyi NT] gi|261266742|sp|A0Q1T4|OBG_CLONN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|118135223|gb|ABK62267.1| GTP-binding protein, GTP1/OBG family [Clostridium novyi NT] Length = 424 Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 147/323 (45%), Positives = 213/323 (65%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+ ++SG+GG G ISFRREK++ GGP+GG GG GG V + A NL TL+DF Y+ Sbjct: 2 FIDTAKILVKSGNGGNGCISFRREKYVAMGGPNGGDGGNGGSVILVADRNLTTLLDFTYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A +GE G G KGED+ + VP+GT V + + + DL +EG I+A GG Sbjct: 62 RKYVADNGEDGGNSKCFGKKGEDLYIKVPIGTVVKDVETGKTMVDLAKEGDSYIVARGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + T QAP +A PG+ G+E++I L++KL+AD+G+IG PN GKST L+ V++A Sbjct: 122 GGKGNYHFATPTRQAPNFAEPGMPGEERMINLEIKLLADVGLIGFPNVGKSTLLSMVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+VK EG F++ADIPGII+ A +G G+G FL+H ERT +L+ Sbjct: 182 KPKIANYHFTTLKPNLGVVKIEGANAFVMADIPGIIEGASEGVGLGLDFLRHIERTRLLV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H+V S +E N ++ I +EL Y+ +L + +IV ++ID + D + K E+ Sbjct: 242 HVVDISGVEGRNPIEDFKKINEELKNYSVKLWDRPQIVVANKIDMLYDEEVFETFKKEVN 301 Query: 298 TQCGQVPFEFSSITGHGIPQILE 320 F+ S+ T G+ +++ Sbjct: 302 KLGFDKVFKISAATRDGVDDLIK 324 >gi|331000283|ref|ZP_08323967.1| Obg family GTPase CgtA [Parasutterella excrementihominis YIT 11859] gi|329572449|gb|EGG54102.1| Obg family GTPase CgtA [Parasutterella excrementihominis YIT 11859] Length = 370 Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 155/337 (45%), Positives = 225/337 (66%), Gaps = 7/337 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREKFI GGPDGG GGRGG ++ A NLNTLID+R Sbjct: 1 MKFVDEAKIEVFAGKGGNGVASFRREKFIPKGGPDGGDGGRGGSIYAVADRNLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F+A++GE G + G D+ L VPVGT + + D I DLD+ G++ +LA G Sbjct: 61 YTRKFQAKNGENGRGSDCYGRGAPDIELRVPVGTVITDLDTGETIADLDKNGEKALLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFK+STN+AP PG GQE+ + L+L+++AD+G++GLPNAGKST +++V+ Sbjct: 121 GKGGLGNLHFKTSTNRAPRQCTPGEPGQERTLKLELRVLADVGLLGLPNAGKSTLISAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKP+IADYPFTTL+P+LG+V+ G + F++ADIPG+I+ A +GAG+G +FL+H RT + Sbjct: 181 NAKPRIADYPFTTLHPHLGVVRAGPESSFVIADIPGLIEGASEGAGLGHQFLRHLSRTSL 240 Query: 240 LLHIVSA----LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ EE+ AA + I++EL ++ L K V L+++D V + A ++ Sbjct: 241 LLHVIDVAPLDTEEDPIAAARAIVEELRKFDPALADKPRWVVLNKMDLVPEEERANVVDK 300 Query: 296 LATQCG-QVP-FEFSSITGHGIPQILECLHDKIFSIR 330 G VP F S++T G +++ + + I R Sbjct: 301 YREAFGTDVPMFAISAVTREGTEALVKAIAEDIHEQR 337 >gi|301063305|ref|ZP_07203850.1| Obg family GTPase CgtA [delta proteobacterium NaphS2] gi|300442602|gb|EFK06822.1| Obg family GTPase CgtA [delta proteobacterium NaphS2] Length = 340 Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 148/331 (44%), Positives = 220/331 (66%), Gaps = 9/331 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M FLDEA V +RSG+GG+G +SFRREKFI GGPDGG GG GG V ++T L TL D+R Sbjct: 1 MFFLDEAVVTVRSGNGGSGCVSFRREKFISKGGPDGGDGGNGGSVIARSTRKLFTLEDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++H A++G GM +N+SGA G D +L PVGT + E + ++ DL + Q I+L PG Sbjct: 61 SKRHLSARNGGPGMGKNKSGANGADCILKTPVGTLIEEVESGRVLADLILDDQEIVLIPG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF +STN+AP +A PG+ G+ + L LKL+AD+G++GLPNAGKST L+ +T Sbjct: 121 GTGGKGNQHFATSTNRAPRFAQPGLPGKTLKLKLTLKLLADVGLVGLPNAGKSTLLSRLT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +A+PKI YPFTTL PNLG++ + + ++ADIPG+++ A G G+G RFL+H ERT + Sbjct: 181 QARPKIGGYPFTTLVPNLGVMPLDEAQTLVIADIPGLVEGARLGRGLGHRFLRHIERTRL 240 Query: 240 LLHIVSA---LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V A E+N+ + + + +E+SAY+ L K V +++ID + ++ L Sbjct: 241 LLHLVDAGRSSEKNILSDFLMLREEMSAYSPALAHKPYFVVINKIDLSGPEN--KEIRAL 298 Query: 297 ATQCGQVPFE---FSSITGHGIPQILECLHD 324 ++ E S++TG G+ ++++ + + Sbjct: 299 RRALDRIHIESMCTSALTGEGLDELVQLMTE 329 >gi|317493613|ref|ZP_07952034.1| obg family GTPase CgtA [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918556|gb|EFV39894.1| obg family GTPase CgtA [Enterobacteriaceae bacterium 9_2_54FAA] Length = 392 Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 140/305 (45%), Positives = 210/305 (68%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA ++I +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEAAIHIEAGDGGNGCVSFRREKYIPRGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G D+ + VPVGT+V + D ++ D+ + Q++++ G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGNDITIKVPVGTRVVDLDTGEVLGDMTRHAQKLMVGKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G ++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTMGTKGDKRDLKLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDHEKSFVVADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ E + + I++EL Y+ +L +K + ++ID +D + ++ + Sbjct: 241 LLHLIDLAPIDESDPIENAKVIINELGQYSEKLSQKPRWLVFNKIDILDPEEAKQRAQAI 300 Query: 297 ATQCG 301 A G Sbjct: 301 ADALG 305 >gi|225572152|ref|ZP_03781016.1| hypothetical protein RUMHYD_00446 [Blautia hydrogenotrophica DSM 10507] gi|225040324|gb|EEG50570.1| hypothetical protein RUMHYD_00446 [Blautia hydrogenotrophica DSM 10507] Length = 429 Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 150/324 (46%), Positives = 207/324 (63%), Gaps = 9/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+ IRSG GG G +SFRRE ++ GGPDGG GG+GGDV + LNTL D+R++ Sbjct: 2 FADRAKIIIRSGKGGDGHVSFRRELYVPNGGPDGGDGGKGGDVIFEVDKGLNTLTDYRHR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F AQ GE G KR GA G D++L VP GT V E +I D+ E R I+ GG Sbjct: 62 RKFHAQDGEPGGKRRCHGANGGDIILKVPEGTVVTEAQSGKVIADMSGENTRQIILRGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+ ++T Q P YA PG QE + L+LK+IAD+G++G PN GKSTFL+ VT A Sbjct: 122 GGKGNMHYATATMQVPKYAQPGQPAQELEVKLELKVIADVGLVGFPNVGKSTFLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIA+Y FTTL PNLG+V F++ADIPG+I+ A +G G+G FL+H ERT V++H Sbjct: 182 QPKIANYHFTTLSPNLGVVDLDNSGFVIADIPGLIEGASEGVGLGHEFLRHIERTRVIIH 241 Query: 243 IVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT---LARKKNE 295 IV A + + Y+ I EL AYN E+ K+ +++ ++ID + +T + K E Sbjct: 242 IVDAASTEGRDPIDDIYK-INRELEAYNPEIAKRPQVIAANKIDAIYDETDSPVELLKME 300 Query: 296 LATQCGQVPFEFSSITGHGIPQIL 319 Q +V F S+++G G+ ++L Sbjct: 301 FEPQGVKV-FPISAVSGEGVRELL 323 >gi|229815332|ref|ZP_04445667.1| hypothetical protein COLINT_02378 [Collinsella intestinalis DSM 13280] gi|229809112|gb|EEP44879.1| hypothetical protein COLINT_02378 [Collinsella intestinalis DSM 13280] Length = 500 Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 139/338 (41%), Positives = 215/338 (63%), Gaps = 9/338 (2%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F D ++ ++ GDGGAG +SFRRE F+ GGPDGG GG GGDV IQA + L++LID+R+ Sbjct: 23 QFTDICRINVKGGDGGAGCMSFRREAFVPKGGPDGGDGGHGGDVVIQADAQLSSLIDYRF 82 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISL-----ICDLDQEGQRII 116 + HF+A+ G G + GA G+D++L VP+GT + E D ++ + DL +G+R++ Sbjct: 83 KHHFRAEAGTHGKGSRKDGADGKDLILKVPMGTVIRELDPTTMEPAYDLADLTHDGERVV 142 Query: 117 LAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFL 176 +APGG GG GN HF +ST +AP +A G E I L++KL+AD ++G P+ GKS+ + Sbjct: 143 VAPGGTGGLGNPHFVTSTRRAPAFAQKGEPAIEHWIELEMKLMADAALVGFPSVGKSSLI 202 Query: 177 ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTER 236 A ++ A+PKIADYPFTTL PNLG+V+ G +++AD+PG+I+ A +G G+G +FL+H ER Sbjct: 203 ARMSAARPKIADYPFTTLVPNLGMVRAGEYSYVVADVPGLIEGAAEGKGLGHQFLRHVER 262 Query: 237 THVLLHIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 T ++LH+V S + Y+ I DEL Y S+L + +IV ++ D + Sbjct: 263 TALILHVVDITGSYEGRDPLEDYRIINDELRRYASDLADRPQIVVANKCDASGVADRVQA 322 Query: 293 KNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 A + G F S++TG G+ ++ +++ +R Sbjct: 323 LKMAALEDGHEFFAVSALTGAGLQTLMLACGERVSELR 360 >gi|9107610|gb|AAF85221.1|AE004051_5 GTP-binding protein [Xylella fastidiosa 9a5c] Length = 347 Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 128/233 (54%), Positives = 172/233 (73%), Gaps = 1/233 (0%) Query: 13 SGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEK 72 +G+GG G +SFRREKFI GGPDGG GG GG VW+ A NLNTL+DFR+++ FKAQ G Sbjct: 3 AGNGGDGCVSFRREKFIPLGGPDGGDGGDGGSVWLVADENLNTLVDFRHERIFKAQRGVN 62 Query: 73 GMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKS 132 GM + G G+D +++VP+GT V +I D+ + G R+++A GG GG GN HFKS Sbjct: 63 GMGQQMYGKAGQDKIISVPIGTVVINVQTDEVIGDMVRHGDRLLVAKGGTGGLGNMHFKS 122 Query: 133 STNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFT 192 S N+AP A PG G+E+ + L+LKL+ADIG++G PN GKSTF+ +V+ A PK+ADYPFT Sbjct: 123 SINRAPRQARPGEQGEERTLKLELKLLADIGMLGFPNVGKSTFIRAVSAATPKVADYPFT 182 Query: 193 TLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 TLYPNLG+VK E Y F++AD+PG+I+ A G G+G +FL+H +RT +LLH+V Sbjct: 183 TLYPNLGVVKIEAYSSFVIADVPGLIEGAADGVGLGTQFLRHLQRTKLLLHMV 235 >gi|218129347|ref|ZP_03458151.1| hypothetical protein BACEGG_00924 [Bacteroides eggerthii DSM 20697] gi|217988524|gb|EEC54845.1| hypothetical protein BACEGG_00924 [Bacteroides eggerthii DSM 20697] Length = 393 Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 149/327 (45%), Positives = 212/327 (64%), Gaps = 7/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+I GGPDGG GGRGG V ++ N TL+ RY Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYIPNGGPDGGDGGRGGHVILRGNRNYWTLLHLRYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G GED V+ VP GT V+ + ICD+ + GQ ++L GG Sbjct: 66 RHIMAGHGESGSKNRSFGKDGEDKVIEVPCGTVVYNAETGEYICDVTEHGQEVVLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + ++LKL+AD+G++G PNAGKST L++V+ A Sbjct: 126 GGLGNWHFKTATRQAPRFAQPGEPMQEMTVIMELKLLADVGLVGFPNAGKSTLLSAVSSA 185 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA+YPFTTL PNLGIV ++G K F++ADIPGII+ A G G+G RFL+H ER +L Sbjct: 186 KPKIANYPFTTLEPNLGIVSYRDG-KSFVMADIPGIIEGASAGKGLGLRFLRHIERNSLL 244 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L +V A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 245 LFMVPADSDDIRKEYEILLNELRTFNPEMLDKQRVLAVTKCDMLDQELMDEIEPTLPE-- 302 Query: 301 GQVPFEF-SSITGHGIPQILECLHDKI 326 +P F S+I+G GI + + L +++ Sbjct: 303 -NIPHVFISAISGMGISVLKDLLWEEL 328 >gi|161485606|ref|YP_389181.2| GTPase ObgE [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|261266901|sp|Q30XW0|OBG_DESDG RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 366 Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 150/328 (45%), Positives = 219/328 (66%), Gaps = 10/328 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + SG+GG G +SFRREKFI GGPDGG GG GG+V +A++ L +L DFR Sbjct: 1 MRFVDEAVIKAISGNGGHGCVSFRREKFIPRGGPDGGDGGNGGNVVFKASTRLLSLYDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE--EDGI-SLICDLDQEGQRIIL 117 ++ ++A++G G G G+D+V+ +PVGT VFE E+G SLI DL + +++ Sbjct: 61 LKRVYQAENGRPGQGSQMHGRGGKDLVVEMPVGTLVFERGENGAESLIADLSEPDVEVVI 120 Query: 118 APGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 A GG GG GN HFKSST QAP ++ PG G+EK + L+LK++AD G++GLPNAGKSTF++ Sbjct: 121 AHGGRGGKGNEHFKSSTMQAPRFSQPGEPGEEKSLRLELKILADAGLLGLPNAGKSTFIS 180 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVKEGY---KEFILADIPGIIKNAHQGAGIGDRFLKHT 234 V+ AKPKIA YPFTTL PNLG++ + + + ++ADIPG+I+ AH+G G+G RFLKH Sbjct: 181 QVSAAKPKIAAYPFTTLVPNLGVMMDEFDPDRRMVIADIPGLIEGAHEGQGLGHRFLKHV 240 Query: 235 ERTHVLLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 ERT L+HI+S + EN A + I DEL ++ L + +I +++ID + + + Sbjct: 241 ERTRFLVHILSIEDVDMENPWAGFDLINDELQRFDETLGSREQIQVVNKIDLLPPEEVDG 300 Query: 292 KKNELATQCGQVPFEFSSITGHGIPQIL 319 + A G+ F S++ G G+ ++ Sbjct: 301 LRAR-AEADGRRIFFISALEGEGLDAVV 327 >gi|317046714|ref|YP_004114362.1| GTP-binding protein Obg/CgtA [Pantoea sp. At-9b] gi|316948331|gb|ADU67806.1| GTP-binding protein Obg/CgtA [Pantoea sp. At-9b] Length = 391 Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 137/305 (44%), Positives = 206/305 (67%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEATILAVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+D+++ VPVGT+V ++ + D+ + Q++++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDIIVKVPVGTRVIDQGTGETLGDMTRHDQKLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTMGTPGEKRDLQLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ E + + IL EL Y+ +L +K + ++ D + + + + Sbjct: 241 LLHLIDIAPIDESDPVENARIILGELEKYSDKLYQKPRWLVFNKTDLLSREEAESRAKAI 300 Query: 297 ATQCG 301 A G Sbjct: 301 AEALG 305 >gi|198282600|ref|YP_002218921.1| GTP-binding protein Obg/CgtA [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667562|ref|YP_002424790.1| GTP-binding protein Obg/CgtA [Acidithiobacillus ferrooxidans ATCC 23270] gi|261266642|sp|B7J427|OBG_ACIF2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266643|sp|B5ELU2|OBG_ACIF5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|198247121|gb|ACH82714.1| GTP-binding protein Obg/CgtA [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519775|gb|ACK80361.1| GTP-binding protein Obg/CgtA [Acidithiobacillus ferrooxidans ATCC 23270] Length = 374 Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 147/328 (44%), Positives = 220/328 (67%), Gaps = 6/328 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE ++++ SG+GG G +SFRREKFI FGGPDGG GGRGG V++ A ++LNTLIDFR Sbjct: 1 MKFIDEVRIHVASGNGGHGAVSFRREKFIPFGGPDGGDGGRGGSVYLVAQASLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ+ ++A++G G R +G G D+ + VPVGT V+++D L+ DL EG+R+++A Sbjct: 61 YQRRYRAENGHGGAGRQMTGRAGHDLEIKVPVGTLVYDDDTHELLGDLRFEGERLLIARS 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN +KSSTN+AP G G+E+ + L+L+L+AD+G++GLPNAGKST + +V+ Sbjct: 121 GRGGHGNLFYKSSTNRAPRQFEKGGAGEERDLRLELRLLADVGLLGLPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTLYPNLG+V+ ++ F+LADIPG+I A +GAG+G RFLKH RT + Sbjct: 181 AARPKVADYPFTTLYPNLGVVRVAAHESFVLADIPGLIPGASEGAGLGTRFLKHLSRTRL 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V + + + EL+AY+ L + + +++ D + + + ++ Sbjct: 241 LLHLVDMAPVDGSDPAMNIRALEMELAAYSPTLAARPRWLVVNKSDLLPGEEAEARFQQI 300 Query: 297 AT--QCGQVPFEFSSITGHGIPQILECL 322 T Q F S+ +G G ++ + Sbjct: 301 CTALQWESPAFLISAASGAGCEALVYAI 328 >gi|227893471|ref|ZP_04011276.1| GTP-binding protein [Lactobacillus ultunensis DSM 16047] gi|227864696|gb|EEJ72117.1| GTP-binding protein [Lactobacillus ultunensis DSM 16047] Length = 434 Score = 248 bits (634), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 146/324 (45%), Positives = 215/324 (66%), Gaps = 8/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EKF+ GGP GG GGRGG + A S L TL+DFRY+ Sbjct: 4 FVDQTKIEVQAGKGGDGMVAFRHEKFVPNGGPAGGDGGRGGSIIFVADSGLRTLMDFRYR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA +GE G +++ G +D+ L VPVGT V++ + LI DL ++GQ +++A GG Sbjct: 64 RKFKADNGENGRIKSQYGRAAKDLYLKVPVGTTVYDFNTGELIGDLVKKGQELVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +S N AP A G G+++++ L+LKL+AD+G++G P+ GKST L+ T+A Sbjct: 124 GGRGNIHFATSVNTAPEIAENGEPGEDRVLRLELKLLADVGLVGFPSVGKSTLLSVTTKA 183 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+I+ A +G G+G +FL+H ERT V+ Sbjct: 184 KPKIAAYQFTTLTPNLGMVILPDG-RDFSMADLPGLIEGASKGVGLGIQFLRHVERTKVI 242 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 LH+VS N + A Y I EL Y ++L KK E++ SQ+D + D LA K L Sbjct: 243 LHLVSMDPNNGREAIDDYHTIRKELKNYENDLSKKRELIIASQMDIPGAEDKLAEFKQAL 302 Query: 297 ATQCGQVP-FEFSSITGHGIPQIL 319 + P +E SS+T G+ +++ Sbjct: 303 KVEGNDEPVYEISSVTHQGVNKLM 326 >gi|78046842|ref|YP_363017.1| GTPase ObgE [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123585595|sp|Q3BW46|OBG_XANC5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|78035272|emb|CAJ22917.1| GTP-binding protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 355 Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 154/327 (47%), Positives = 210/327 (64%), Gaps = 14/327 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MK +DEA++ + +G+GG G + FRREKFI GGPDGG GG GG VWI A N+NTL+DFR Sbjct: 1 MKLVDEAEILVTAGNGGNGCVGFRREKFIPLGGPDGGDGGAGGSVWIVADENVNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ FKAQ GE GM R G GED ++ VPVGT V +I DL + G R+++A G Sbjct: 61 HERTFKAQRGENGMGRQAYGKGGEDRIIVVPVGTVVINVQTDEVIGDLTRHGDRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP A G G+E+++ L+LKL+AD+G++G PNAGKST + +V+ Sbjct: 121 GKGGLGNMHFKSSVNRAPRQATTGEEGEERLLKLELKLLADVGLLGFPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTLYPNLG+V E Y+ F++AD+PG+I+ A GAG+G +FL+H +RT + Sbjct: 181 SATPKVADYPFTTLYPNLGVVSVEAYRSFVIADVPGLIEGAADGAGLGTQFLRHLQRTRL 240 Query: 240 LLHIVS---AL-------EENVQAAYQC--ILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V AL + V A Q I EL ++ EL KK + L++ D + D Sbjct: 241 LLHLVDISPALGVYGEGGVDGVSPADQVRTIERELERHDPELLKKPRWLVLNKADLMFED 300 Query: 288 TLARKKNELATQCG-QVPFEFSSITGH 313 + + G P+ S G Sbjct: 301 EARAAAESIVAELGWTAPWYLVSALGR 327 >gi|150004242|ref|YP_001298986.1| GTPase ObgE [Bacteroides vulgatus ATCC 8482] gi|254884740|ref|ZP_05257450.1| GTPase ObgE [Bacteroides sp. 4_3_47FAA] gi|294775399|ref|ZP_06740915.1| Obg family GTPase CgtA [Bacteroides vulgatus PC510] gi|319644197|ref|ZP_07998722.1| GTP-binding protein [Bacteroides sp. 3_1_40A] gi|261266747|sp|A6L100|OBG_BACV8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|149932666|gb|ABR39364.1| GTP-binding protein [Bacteroides vulgatus ATCC 8482] gi|254837533|gb|EET17842.1| GTPase ObgE [Bacteroides sp. 4_3_47FAA] gi|294450751|gb|EFG19235.1| Obg family GTPase CgtA [Bacteroides vulgatus PC510] gi|317384319|gb|EFV65290.1| GTP-binding protein [Bacteroides sp. 3_1_40A] Length = 394 Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 151/323 (46%), Positives = 212/323 (65%), Gaps = 7/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK++ GGPDGG GGRGG V ++ N TL+ +Y Sbjct: 6 FVDYVKIYCRSGKGGRGSAHMRREKYVPNGGPDGGDGGRGGHVILRGNRNYWTLLHLKYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HG G K G GED V+ VP GT V+ + ICD+ + GQ IIL GG Sbjct: 66 RHVFATHGGNGSKNKSFGKDGEDKVIEVPCGTVVYNAETGEYICDITEHGQEIILLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+++T QAP +A PG QE ++ L+LKL+AD+G++G PNAGKST L++V+ A Sbjct: 126 GGLGNWHFRTATRQAPRFAQPGEPMQELMVILELKLLADVGLVGFPNAGKSTLLSTVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PKIA+YPFTTL PNLGIV +EG K F++ADIPGII+ A +G G+G RFL+H ER +L Sbjct: 186 RPKIANYPFTTLEPNLGIVSYREG-KSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLL 244 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L +V ++++ Y+ +L+EL+ +N E+ K ++ +++ D +D + +A + T Sbjct: 245 LFMVPGDTDDIRKEYEILLNELATFNPEMLDKQRVLAITKSDMLDEELIAMLE---PTLP 301 Query: 301 GQVPFEF-SSITGHGIPQILECL 322 VP F SS+TG GI Q+ + L Sbjct: 302 DNVPHIFISSVTGLGIQQLKDIL 324 >gi|82778497|ref|YP_404846.1| GTPase ObgE [Shigella dysenteriae Sd197] gi|309785511|ref|ZP_07680142.1| GTP-binding protein Obg/CgtA [Shigella dysenteriae 1617] gi|123561516|sp|Q32BF0|OBG_SHIDS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|81242645|gb|ABB63355.1| putative GTP-binding factor [Shigella dysenteriae Sd197] gi|308926631|gb|EFP72107.1| GTP-binding protein Obg/CgtA [Shigella dysenteriae 1617] Length = 390 Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 205/290 (70%), Gaps = 6/290 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D Sbjct: 241 LLHLIDIDPIDGTDPVENA-RIIISELEKYSQDLAAKPRWLVFNKIDLLD 289 >gi|325956630|ref|YP_004292042.1| GTPase CgtA [Lactobacillus acidophilus 30SC] gi|325333195|gb|ADZ07103.1| GTPase CgtA [Lactobacillus acidophilus 30SC] gi|327183455|gb|AEA31902.1| GTPase CgtA [Lactobacillus amylovorus GRL 1118] Length = 434 Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 145/324 (44%), Positives = 214/324 (66%), Gaps = 8/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EK++ GGP GG GGRGG + A S L TL+DFRY+ Sbjct: 4 FVDQTKIEVQAGKGGDGMVAFRHEKYVPNGGPAGGDGGRGGSIIFVADSGLRTLMDFRYR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA +GE G +++ G +D+ L VPVGT V++ + LI DL ++GQ +++A GG Sbjct: 64 RKFKADNGENGRIKSQYGRAAKDLYLKVPVGTTVYDFNTGELIGDLVEKGQELVVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +S N AP A G G+++++ L+LKL+AD+G++G P+ GKST L+ T+A Sbjct: 124 GGRGNIHFATSVNTAPEIAENGEPGEDRVLRLELKLLADVGLVGFPSVGKSTLLSVTTKA 183 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+I+ A QG G+G +FL+H ERT V+ Sbjct: 184 KPKIAAYQFTTLTPNLGMVILPDG-RDFSMADLPGLIEGASQGVGLGIQFLRHVERTKVI 242 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 LH+VS N + A Y I EL Y ++L KK E++ SQ+D + D L K L Sbjct: 243 LHLVSMDPNNGRKAIDDYHTIRKELQNYETDLSKKRELIVASQMDIPSAEDKLKEFKEAL 302 Query: 297 ATQCGQVP-FEFSSITGHGIPQIL 319 + P +E SS+T G+ +++ Sbjct: 303 QKEGNDEPVYEISSVTHQGVSKLM 326 >gi|303229904|ref|ZP_07316680.1| Obg family GTPase CgtA [Veillonella atypica ACS-134-V-Col7a] gi|302515460|gb|EFL57426.1| Obg family GTPase CgtA [Veillonella atypica ACS-134-V-Col7a] Length = 423 Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 143/323 (44%), Positives = 221/323 (68%), Gaps = 6/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A+V++++GDGG G SFRREK++ GGP GG GG+G DV ++A N+NTL+DFRY+ Sbjct: 2 FIDRARVFVKAGDGGDGMSSFRREKYVPNGGPSGGDGGQGADVILKADKNINTLVDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA G G N+ G ED+++ VP+GT V +E+ + CDL +G I+A GG Sbjct: 62 RQFKAPKGGNGESANKHGRGAEDLIIPVPLGTVVKDEESGKVFCDLVHDGDTFIIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F SS+N+AP +A G G+E+ + L+LK++AD+G++G P+ GKS+ L V++A Sbjct: 122 GGRGNARFLSSSNRAPTFAEKGEPGEERWLQLELKVLADVGLLGYPSVGKSSILRKVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P++A Y FTTL P LG+V G + F+LADIPG+I+ A +G G+G FL+H ERT++L+ Sbjct: 182 QPEVAAYHFTTLTPVLGVVTLPGDRSFVLADIPGLIEGASEGVGLGHNFLRHVERTNILI 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H+ VS +E + + + I DEL Y+ +L K +IV L++ID V D +T+ K+ Sbjct: 242 HVLDVSGMEGRDPKVDFDAINDELRKYSEKLANKKQIVALNKIDLVFDDETIPNTKSYFE 301 Query: 298 TQCGQVPFEFSSITGHGIPQILE 320 + +V F ++++G G+P+++E Sbjct: 302 DKGYEV-FLINALSGEGLPELME 323 >gi|24114472|ref|NP_708982.1| GTPase ObgE [Shigella flexneri 2a str. 301] gi|30064521|ref|NP_838692.1| GTPase ObgE [Shigella flexneri 2a str. 2457T] gi|82545579|ref|YP_409526.1| GTPase ObgE [Shigella boydii Sb227] gi|110807049|ref|YP_690569.1| GTPase ObgE [Shigella flexneri 5 str. 8401] gi|157155525|ref|YP_001464658.1| GTPase ObgE [Escherichia coli E24377A] gi|157162667|ref|YP_001459985.1| GTPase ObgE [Escherichia coli HS] gi|170018567|ref|YP_001723521.1| GTPase ObgE [Escherichia coli ATCC 8739] gi|170683110|ref|YP_001745455.1| GTPase ObgE [Escherichia coli SMS-3-5] gi|187733799|ref|YP_001881902.1| GTPase ObgE [Shigella boydii CDC 3083-94] gi|191169719|ref|ZP_03031393.1| GTP-binding protein Obg/CgtA [Escherichia coli B7A] gi|194430229|ref|ZP_03062727.1| GTP-binding protein Obg/CgtA [Escherichia coli B171] gi|209920658|ref|YP_002294742.1| GTPase ObgE [Escherichia coli SE11] gi|215488499|ref|YP_002330930.1| GTPase ObgE [Escherichia coli O127:H6 str. E2348/69] gi|218550466|ref|YP_002384257.1| GTPase ObgE [Escherichia fergusonii ATCC 35469] gi|218555753|ref|YP_002388666.1| GTPase ObgE [Escherichia coli IAI1] gi|218691473|ref|YP_002399685.1| GTPase ObgE [Escherichia coli ED1a] gi|218696888|ref|YP_002404555.1| GTPase ObgE [Escherichia coli 55989] gi|218706803|ref|YP_002414322.1| GTPase ObgE [Escherichia coli UMN026] gi|253771983|ref|YP_003034814.1| GTPase ObgE [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163125|ref|YP_003046233.1| GTPase ObgE [Escherichia coli B str. REL606] gi|256018898|ref|ZP_05432763.1| GTPase ObgE [Shigella sp. D9] gi|260845996|ref|YP_003223774.1| GTPase ObgE [Escherichia coli O103:H2 str. 12009] gi|293406792|ref|ZP_06650718.1| obgE [Escherichia coli FVEC1412] gi|293449517|ref|ZP_06663938.1| obg family GTPase CgtA [Escherichia coli B088] gi|298382533|ref|ZP_06992130.1| GTP-binding protein [Escherichia coli FVEC1302] gi|300817564|ref|ZP_07097780.1| Obg family GTPase CgtA [Escherichia coli MS 107-1] gi|300823853|ref|ZP_07103977.1| Obg family GTPase CgtA [Escherichia coli MS 119-7] gi|300897948|ref|ZP_07116326.1| Obg family GTPase CgtA [Escherichia coli MS 198-1] gi|300904372|ref|ZP_07122222.1| Obg family GTPase CgtA [Escherichia coli MS 84-1] gi|300918942|ref|ZP_07135499.1| Obg family GTPase CgtA [Escherichia coli MS 115-1] gi|300926075|ref|ZP_07141895.1| Obg family GTPase CgtA [Escherichia coli MS 182-1] gi|300929876|ref|ZP_07145320.1| Obg family GTPase CgtA [Escherichia coli MS 187-1] gi|300938096|ref|ZP_07152872.1| Obg family GTPase CgtA [Escherichia coli MS 21-1] gi|301022039|ref|ZP_07185981.1| Obg family GTPase CgtA [Escherichia coli MS 69-1] gi|301301758|ref|ZP_07207892.1| Obg family GTPase CgtA [Escherichia coli MS 124-1] gi|301326388|ref|ZP_07219748.1| Obg family GTPase CgtA [Escherichia coli MS 78-1] gi|307313112|ref|ZP_07592738.1| GTP-binding protein Obg/CgtA [Escherichia coli W] gi|309793761|ref|ZP_07688187.1| Obg family GTPase CgtA [Escherichia coli MS 145-7] gi|312968479|ref|ZP_07782688.1| GTP-binding protein Obg/CgtA [Escherichia coli 2362-75] gi|312972543|ref|ZP_07786717.1| GTP-binding protein Obg/CgtA [Escherichia coli 1827-70] gi|331648983|ref|ZP_08350071.1| Obg family GTPase CgtA [Escherichia coli M605] gi|331654787|ref|ZP_08355787.1| Obg family GTPase CgtA [Escherichia coli M718] gi|331664795|ref|ZP_08365700.1| Obg family GTPase CgtA [Escherichia coli TA143] gi|331670010|ref|ZP_08370855.1| Obg family GTPase CgtA [Escherichia coli TA271] gi|331679262|ref|ZP_08379934.1| Obg family GTPase CgtA [Escherichia coli H591] gi|331684830|ref|ZP_08385422.1| Obg family GTPase CgtA [Escherichia coli H299] gi|332279986|ref|ZP_08392399.1| GTPase ObgE [Shigella sp. D9] gi|81839381|sp|Q83Q14|OBG_SHIFL RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|123047882|sp|Q0T0A1|OBG_SHIF8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|123558572|sp|Q31W60|OBG_SHIBS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263091|sp|B2U1Z4|OBG_SHIB3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266768|sp|A7ZS79|OBG_ECO24 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266769|sp|B7UJ76|OBG_ECO27 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266771|sp|B7LHP6|OBG_ECO55 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266774|sp|B7N0W5|OBG_ECO81 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266775|sp|B7M089|OBG_ECO8A RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266777|sp|A8A4Z8|OBG_ECOHS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266779|sp|B1IQU0|OBG_ECOLC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266780|sp|B7NDG7|OBG_ECOLU RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266781|sp|B6I1Q6|OBG_ECOSE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266782|sp|B1LFT3|OBG_ECOSM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266787|sp|B7LR50|OBG_ESCF3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|24053655|gb|AAN44689.1| putative GTP-binding factor [Shigella flexneri 2a str. 301] gi|30042780|gb|AAP18503.1| putative GTP-binding factor [Shigella flexneri 2a str. 2457T] gi|81246990|gb|ABB67698.1| putative GTP-binding factor [Shigella boydii Sb227] gi|110616597|gb|ABF05264.1| putative GTP-binding factor [Shigella flexneri 5 str. 8401] gi|157068347|gb|ABV07602.1| GTP-binding protein Obg/CgtA [Escherichia coli HS] gi|157077555|gb|ABV17263.1| GTP-binding protein Obg/CgtA [Escherichia coli E24377A] gi|169753495|gb|ACA76194.1| GTP-binding protein Obg/CgtA [Escherichia coli ATCC 8739] gi|170520828|gb|ACB19006.1| GTP-binding protein Obg/CgtA [Escherichia coli SMS-3-5] gi|187430791|gb|ACD10065.1| GTP-binding protein Obg/CgtA [Shigella boydii CDC 3083-94] gi|190900240|gb|EDV60115.1| GTP-binding protein Obg/CgtA [Escherichia coli B7A] gi|194411730|gb|EDX28054.1| GTP-binding protein Obg/CgtA [Escherichia coli B171] gi|209913917|dbj|BAG78991.1| putative GTP-binding factor [Escherichia coli SE11] gi|215266571|emb|CAS11010.1| GTPase involved in cell partioning and DNA repair [Escherichia coli O127:H6 str. E2348/69] gi|218353620|emb|CAU99820.1| GTPase involved in cell partioning and DNA repair [Escherichia coli 55989] gi|218358007|emb|CAQ90653.1| GTPase involved in cell partioning and DNA repair [Escherichia fergusonii ATCC 35469] gi|218362521|emb|CAR00145.1| GTPase involved in cell partioning and DNA repair [Escherichia coli IAI1] gi|218429037|emb|CAR09983.2| GTPase involved in cell partioning and DNA repair [Escherichia coli ED1a] gi|218433900|emb|CAR14817.1| GTPase involved in cell partioning and DNA repair [Escherichia coli UMN026] gi|242378726|emb|CAQ33516.1| GTPase involved in chromosome partitioning and ribosome assembly [Escherichia coli BL21(DE3)] gi|253323027|gb|ACT27629.1| GTP-binding protein Obg/CgtA [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975026|gb|ACT40697.1| GTPase involved in cell partioning and DNA repair [Escherichia coli B str. REL606] gi|253979182|gb|ACT44852.1| GTPase involved in cell partioning and DNA repair [Escherichia coli BL21(DE3)] gi|257761143|dbj|BAI32640.1| GTPase ObgE [Escherichia coli O103:H2 str. 12009] gi|281180225|dbj|BAI56555.1| putative GTP-binding factor [Escherichia coli SE15] gi|281602566|gb|ADA75550.1| GTPase involved in cell partioning and DNA repair [Shigella flexneri 2002017] gi|284923206|emb|CBG36300.1| probable GTP-binding protein [Escherichia coli 042] gi|291322607|gb|EFE62036.1| obg family GTPase CgtA [Escherichia coli B088] gi|291426798|gb|EFE99830.1| obgE [Escherichia coli FVEC1412] gi|298277673|gb|EFI19189.1| GTP-binding protein [Escherichia coli FVEC1302] gi|300358340|gb|EFJ74210.1| Obg family GTPase CgtA [Escherichia coli MS 198-1] gi|300397713|gb|EFJ81251.1| Obg family GTPase CgtA [Escherichia coli MS 69-1] gi|300403685|gb|EFJ87223.1| Obg family GTPase CgtA [Escherichia coli MS 84-1] gi|300413929|gb|EFJ97239.1| Obg family GTPase CgtA [Escherichia coli MS 115-1] gi|300417873|gb|EFK01184.1| Obg family GTPase CgtA [Escherichia coli MS 182-1] gi|300456908|gb|EFK20401.1| Obg family GTPase CgtA [Escherichia coli MS 21-1] gi|300462200|gb|EFK25693.1| Obg family GTPase CgtA [Escherichia coli MS 187-1] gi|300523621|gb|EFK44690.1| Obg family GTPase CgtA [Escherichia coli MS 119-7] gi|300529862|gb|EFK50924.1| Obg family GTPase CgtA [Escherichia coli MS 107-1] gi|300842739|gb|EFK70499.1| Obg family GTPase CgtA [Escherichia coli MS 124-1] gi|300846913|gb|EFK74673.1| Obg family GTPase CgtA [Escherichia coli MS 78-1] gi|306907023|gb|EFN37531.1| GTP-binding protein Obg/CgtA [Escherichia coli W] gi|308122718|gb|EFO59980.1| Obg family GTPase CgtA [Escherichia coli MS 145-7] gi|310334920|gb|EFQ01125.1| GTP-binding protein Obg/CgtA [Escherichia coli 1827-70] gi|312286697|gb|EFR14608.1| GTP-binding protein Obg/CgtA [Escherichia coli 2362-75] gi|313648574|gb|EFS13016.1| GTP-binding protein Obg/CgtA [Shigella flexneri 2a str. 2457T] gi|315062489|gb|ADT76816.1| GTPase involved in cell partioning and DNA repair [Escherichia coli W] gi|315257109|gb|EFU37077.1| Obg family GTPase CgtA [Escherichia coli MS 85-1] gi|320186670|gb|EFW61394.1| GTPase ObgE [Shigella flexneri CDC 796-83] gi|320202097|gb|EFW76672.1| GTPase ObgE [Escherichia coli EC4100B] gi|323162875|gb|EFZ48710.1| GTP-binding protein Obg/CgtA [Escherichia coli E128010] gi|323183137|gb|EFZ68535.1| GTP-binding protein Obg/CgtA [Escherichia coli 1357] gi|323189196|gb|EFZ74480.1| GTP-binding protein Obg/CgtA [Escherichia coli RN587/1] gi|323376923|gb|ADX49191.1| GTP-binding protein Obg/CgtA [Escherichia coli KO11] gi|323941717|gb|EGB37896.1| obg family protein GTPase CgtA [Escherichia coli E482] gi|323946963|gb|EGB42979.1| obg family protein GTPase CgtA [Escherichia coli H120] gi|323961162|gb|EGB56776.1| obg family protein GTPase CgtA [Escherichia coli H489] gi|323966363|gb|EGB61797.1| obg family protein GTPase CgtA [Escherichia coli M863] gi|323970254|gb|EGB65525.1| obg family protein GTPase CgtA [Escherichia coli TA007] gi|323979100|gb|EGB74178.1| obg family protein GTPase CgtA [Escherichia coli TW10509] gi|324018292|gb|EGB87511.1| Obg family GTPase CgtA [Escherichia coli MS 117-3] gi|324115213|gb|EGC09177.1| obg family protein GTPase CgtA [Escherichia fergusonii B253] gi|324119548|gb|EGC13430.1| obg family protein GTPase CgtA [Escherichia coli E1167] gi|325498764|gb|EGC96623.1| GTPase ObgE [Escherichia fergusonii ECD227] gi|327251274|gb|EGE62963.1| GTP-binding protein Obg/CgtA [Escherichia coli STEC_7v] gi|330909237|gb|EGH37751.1| GTP-binding protein Obg [Escherichia coli AA86] gi|331042730|gb|EGI14872.1| Obg family GTPase CgtA [Escherichia coli M605] gi|331048169|gb|EGI20246.1| Obg family GTPase CgtA [Escherichia coli M718] gi|331058043|gb|EGI30025.1| Obg family GTPase CgtA [Escherichia coli TA143] gi|331062923|gb|EGI34837.1| Obg family GTPase CgtA [Escherichia coli TA271] gi|331073327|gb|EGI44650.1| Obg family GTPase CgtA [Escherichia coli H591] gi|331078445|gb|EGI49651.1| Obg family GTPase CgtA [Escherichia coli H299] gi|332090684|gb|EGI95778.1| GTP-binding protein Obg/CgtA [Shigella boydii 3594-74] gi|332102338|gb|EGJ05684.1| GTPase ObgE [Shigella sp. D9] gi|332752868|gb|EGJ83253.1| GTP-binding protein Obg/CgtA [Shigella flexneri K-671] gi|332754299|gb|EGJ84665.1| GTP-binding protein Obg/CgtA [Shigella flexneri 2747-71] gi|332765179|gb|EGJ95406.1| GTP-binding protein Obg/CgtA [Shigella flexneri 2930-71] gi|332998825|gb|EGK18421.1| GTP-binding protein Obg/CgtA [Shigella flexneri VA-6] gi|332999262|gb|EGK18848.1| GTP-binding protein Obg/CgtA [Shigella flexneri K-272] gi|333014626|gb|EGK33973.1| GTP-binding protein Obg/CgtA [Shigella flexneri K-304] gi|333014986|gb|EGK34330.1| GTP-binding protein Obg/CgtA [Shigella flexneri K-227] Length = 390 Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 205/290 (70%), Gaps = 6/290 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D Sbjct: 241 LLHLIDIDPIDGTDPVENA-RIIISELEKYSQDLAAKPRWLVFNKIDLLD 289 >gi|308189088|ref|YP_003933219.1| hypothetical protein Pvag_3652 [Pantoea vagans C9-1] gi|308059598|gb|ADO11770.1| Uncharacterized GTP-binding protein [Pantoea vagans C9-1] Length = 390 Score = 248 bits (633), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 139/306 (45%), Positives = 212/306 (69%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPRGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+D+ + VPVGT+V ++ + D+ + GQ++++ G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDIEVKVPVGTRVIDQGTGETLGDMTRHGQKLMVGKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N++P G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRSPRQKTMGTPGEKRDLQLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEQSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHI--VSALEEN--VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+ + ++E+ V+ A + IL EL Y+ +L K + ++ID + + + Sbjct: 241 LLHLIDIDPIDESDPVENA-RIILGELEKYSEKLFNKPRWLVFNKIDLISEEEAQSRAKA 299 Query: 296 LATQCG 301 +A G Sbjct: 300 VAEALG 305 >gi|170765556|ref|ZP_02900367.1| GTP-binding protein Obg/CgtA [Escherichia albertii TW07627] gi|170124702|gb|EDS93633.1| GTP-binding protein Obg/CgtA [Escherichia albertii TW07627] Length = 390 Score = 248 bits (633), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 205/290 (70%), Gaps = 6/290 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D Sbjct: 241 LLHLIDIDPIDGTDPVENA-RIIISELEKYSQDLAAKPRWLVFNKIDLLD 289 >gi|167765209|ref|ZP_02437322.1| hypothetical protein BACSTE_03597 [Bacteroides stercoris ATCC 43183] gi|167696837|gb|EDS13416.1| hypothetical protein BACSTE_03597 [Bacteroides stercoris ATCC 43183] Length = 393 Score = 248 bits (633), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 149/327 (45%), Positives = 212/327 (64%), Gaps = 7/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+I GGPDGG GGRGG V ++ N TL+ RY Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYIPNGGPDGGDGGRGGHVILRGNRNYWTLLHLRYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G GED ++ VP GT V+ + ICD+ + GQ +IL GG Sbjct: 66 RHIMAGHGESGSKNRSFGKDGEDKIIEVPCGTVVYNAETGEYICDVTEHGQEVILLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + ++LKL+AD+G++G PNAGKST L++V+ A Sbjct: 126 GGLGNWHFKTATRQAPRFAQPGEPMQEMTVIMELKLLADVGLVGFPNAGKSTLLSAVSSA 185 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA+YPFTTL PNLGIV ++G K F++ADIPGII+ A G G+G RFL+H ER +L Sbjct: 186 KPKIANYPFTTLEPNLGIVSYRDG-KSFVMADIPGIIEGASAGKGLGLRFLRHIERNSLL 244 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L +V A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 245 LFMVPADSDDIRKEYEILLNELRTFNPEMLDKQRVLAITKCDMLDQELMDEIEPTLPE-- 302 Query: 301 GQVPFEF-SSITGHGIPQILECLHDKI 326 +P F S+I+G GI + + L +++ Sbjct: 303 -SIPHVFISAISGLGISTLKDMLWEEL 328 >gi|157374095|ref|YP_001472695.1| GTPase ObgE [Shewanella sediminis HAW-EB3] gi|261263088|sp|A8FRU4|OBG_SHESH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|157316469|gb|ABV35567.1| GTP1/OBG sub domain protein [Shewanella sediminis HAW-EB3] Length = 386 Score = 248 bits (633), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 139/287 (48%), Positives = 202/287 (70%), Gaps = 6/287 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG+G +SFRREK++ GGPDGG GG GG V++QA + NTLIDF+ Sbjct: 1 MKFVDEAVIRVEAGDGGSGCVSFRREKYVPDGGPDGGDGGDGGSVYLQADESFNTLIDFQ 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ +A+ G+ G R+ +G GED+VL VPVGT+ +E+ + DL GQR+++A G Sbjct: 61 FERFHRAERGKNGRGRDCTGHGGEDLVLKVPVGTRAIDEETEESLGDLTAHGQRMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSTNRAPRQKTLGTPGEVRSLKLELMLLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 RAKPK+ADYPFTTL PNLG+V + + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 RAKPKVADYPFTTLVPNLGVVNPRHGQSFVIADIPGLIEGAADGAGLGVRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 LLH+V + +++A + I+ EL ++ +L K + +++ D Sbjct: 241 LLHLVDIDPIDGSDPIESA-RAIVGELEKHSPKLASKPRWLVINKKD 286 >gi|15602216|ref|NP_245288.1| GTPase ObgE [Pasteurella multocida subsp. multocida str. Pm70] gi|81637219|sp|Q9CNS4|OBG_PASMU RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|12720595|gb|AAK02435.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 390 Score = 248 bits (633), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 145/332 (43%), Positives = 216/332 (65%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRVEAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLVADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F A GE G +G +G D+ L VPVGT+ + D ++ DL + G ++++A G Sbjct: 61 FEKRFAAGRGENGRSAGCTGHRGNDITLRVPVGTRAIDNDTKEVLGDLTKHGAKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTNGTPGEKRDLQLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRVDENHSFVVADIPGLIEGAAEGAGLGVRFLKHLERCRV 240 Query: 240 LLHIV--SALEENVQAAYQCILD-ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V + ++E+ A I++ EL Y+ L K + ++IDT+ + + + Sbjct: 241 LIHLVDIAPIDESDPAENISIIESELFQYSEALADKPRWLVFNKIDTMSDEEAHERAQAI 300 Query: 297 ATQCGQVP--FEFSSITGHGIPQILECLHDKI 326 + G + S++TG + + + D I Sbjct: 301 TERLGWDDDYYLISAVTGKNVQPLCRDIMDFI 332 >gi|332086242|gb|EGI91400.1| GTP-binding protein Obg/CgtA [Shigella boydii 5216-82] Length = 392 Score = 248 bits (633), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 205/290 (70%), Gaps = 6/290 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D Sbjct: 241 LLHLIDIDPIDGTDPVENA-RIIISELEKYSQDLAAKPRWLVFNKIDLLD 289 >gi|74313720|ref|YP_312139.1| GTPase ObgE [Shigella sonnei Ss046] gi|123616067|sp|Q3YX58|OBG_SHISS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|73857197|gb|AAZ89904.1| putative GTP-binding factor [Shigella sonnei Ss046] gi|323165144|gb|EFZ50934.1| GTP-binding protein Obg/CgtA [Shigella sonnei 53G] gi|332086456|gb|EGI91603.1| GTP-binding protein Obg/CgtA [Shigella dysenteriae 155-74] Length = 390 Score = 248 bits (633), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 205/290 (70%), Gaps = 6/290 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D Sbjct: 241 LLHLIDIDPIDGTDPVENA-RIIISELEKYSQDLAAKPRWLVFNKIDLLD 289 >gi|224418184|ref|ZP_03656190.1| GTPase ObgE [Helicobacter canadensis MIT 98-5491] gi|253827511|ref|ZP_04870396.1| GTP-binding protein Obg [Helicobacter canadensis MIT 98-5491] gi|313141719|ref|ZP_07803912.1| GTPase ObgE [Helicobacter canadensis MIT 98-5491] gi|253510917|gb|EES89576.1| GTP-binding protein Obg [Helicobacter canadensis MIT 98-5491] gi|313130750|gb|EFR48367.1| GTPase ObgE [Helicobacter canadensis MIT 98-5491] Length = 366 Score = 248 bits (633), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 137/283 (48%), Positives = 195/283 (68%), Gaps = 2/283 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ SG GG G +SF REKF+ GGPDGG GG+GG+V+ N +TL FR Sbjct: 2 FVDRVEIFVSSGKGGEGAVSFHREKFVINGGPDGGDGGKGGNVYFIVDRNTDTLSHFRGH 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ+G+ G+ RN+ G KGED+V++VP GTQVF+ + L+ DL +E ++I+ GG Sbjct: 62 KHFKAQNGKPGLGRNKYGKKGEDLVISVPPGTQVFDSESGELLLDLVEESKKILFLEGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKS+TNQ P YA G+ G EK I L+LKLIAD+G++G PN GKST ++ V+ A Sbjct: 122 GGLGNVHFKSATNQRPTYAQKGMSGIEKKIRLELKLIADVGLVGFPNVGKSTLVSVVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P+LGIV G Y F++ADIPGII A +G G+G FL+H ERT LL Sbjct: 182 KPEIANYEFTTLIPSLGIVNLGDYHSFVIADIPGIIGGASEGKGLGLEFLRHIERTRFLL 241 Query: 242 HIVS-ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT 283 ++ A +++ + + EL ++++L ++ + LS+ D Sbjct: 242 FVLDIANYRSIEEQFMILRQELEKFSTQLARRPFGIMLSKSDA 284 >gi|324008746|gb|EGB77965.1| Obg family GTPase CgtA [Escherichia coli MS 57-2] Length = 390 Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 205/290 (70%), Gaps = 6/290 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D Sbjct: 241 LLHLIDIDPIDGTDPVENA-RIIISELEKYSQDLAAKPRWLVFNKIDLLD 289 >gi|161525969|ref|YP_001580981.1| GTPase ObgE [Burkholderia multivorans ATCC 17616] gi|189349312|ref|YP_001944940.1| GTPase ObgE [Burkholderia multivorans ATCC 17616] gi|221202402|ref|ZP_03575434.1| Obg family GTPase CgtA [Burkholderia multivorans CGD2M] gi|221208138|ref|ZP_03581143.1| Obg family GTPase CgtA [Burkholderia multivorans CGD2] gi|221213253|ref|ZP_03586228.1| Obg family GTPase CgtA [Burkholderia multivorans CGD1] gi|261266699|sp|A9AI60|OBG_BURM1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|160343398|gb|ABX16484.1| GTP-binding protein Obg/CgtA [Burkholderia multivorans ATCC 17616] gi|189333334|dbj|BAG42404.1| GTP-binding protein [Burkholderia multivorans ATCC 17616] gi|221166705|gb|EED99176.1| Obg family GTPase CgtA [Burkholderia multivorans CGD1] gi|221172041|gb|EEE04483.1| Obg family GTPase CgtA [Burkholderia multivorans CGD2] gi|221177679|gb|EEE10094.1| Obg family GTPase CgtA [Burkholderia multivorans CGD2M] Length = 369 Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 157/334 (47%), Positives = 225/334 (67%), Gaps = 9/334 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V+ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVYAIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+D+ L +PVGT + + D LI DL + Q+++LA G Sbjct: 61 YAKKHLARNGENGRGSDCYGKGGDDITLRMPVGTVITDMDTGELIADLTEHDQQVLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 NAKPKIADYPFTTLAPNLGVVRVGPSKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + +E V A I+ EL Y+ L +K + L+++D V D A + + Sbjct: 241 LLHLVDIAPFDEGVDPVAEATAIVGELRKYDEALYEKPRWLVLNKLDMVPEDERAARVAD 300 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKI 326 + G V FE S++TG G + ++D + Sbjct: 301 FLERFDWHGPV-FEISALTGQGCEALCYAIYDYL 333 >gi|161507439|ref|YP_001577393.1| GTPase ObgE [Lactobacillus helveticus DPC 4571] gi|260101650|ref|ZP_05751887.1| Spo0B-associated GTP-binding protein [Lactobacillus helveticus DSM 20075] gi|261266843|sp|A8YV14|OBG_LACH4 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|160348428|gb|ABX27102.1| GTP binding protein [Lactobacillus helveticus DPC 4571] gi|260084551|gb|EEW68671.1| Spo0B-associated GTP-binding protein [Lactobacillus helveticus DSM 20075] gi|328467454|gb|EGF38529.1| GTPase CgtA [Lactobacillus helveticus MTCC 5463] Length = 434 Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 145/324 (44%), Positives = 215/324 (66%), Gaps = 8/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EK++ GGP GG GGRGG + A S L TL+DFRY+ Sbjct: 4 FVDQTKIEVQAGKGGDGMVAFRHEKYVPNGGPAGGDGGRGGSIIFVADSGLRTLMDFRYR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA GE G +++ G +D+ L VPVGT V++ + LI DL ++GQ +++A GG Sbjct: 64 RKFKADSGENGRIKSQYGRAAKDLYLKVPVGTTVYDFNTGELIGDLVEKGQELVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +S N AP A G G+++++ L+LKL+AD+G++G P+ GKST L+ T+A Sbjct: 124 GGRGNIHFATSVNTAPEIAENGEPGEDRVLRLELKLLADVGLVGFPSVGKSTLLSVTTKA 183 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+I+ A QG G+G +FL+H ERT V+ Sbjct: 184 KPKIAAYEFTTLTPNLGMVILPDG-RDFSMADLPGLIEGASQGVGLGIQFLRHVERTKVI 242 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 LH+VS N + A Y I +EL Y ++L KK E++ SQ+D + + LA K L Sbjct: 243 LHLVSMDPNNGREAIEDYHTIKNELKNYETDLSKKRELIVASQMDISGAEEKLAAFKKAL 302 Query: 297 ATQCGQVP-FEFSSITGHGIPQIL 319 + P +E SS+T G+ +++ Sbjct: 303 KEEGNNEPVYEISSVTHKGVSKLM 326 >gi|159488994|ref|XP_001702482.1| predicted protein [Chlamydomonas reinhardtii] gi|158280504|gb|EDP06261.1| predicted protein [Chlamydomonas reinhardtii] Length = 443 Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 141/331 (42%), Positives = 210/331 (63%), Gaps = 9/331 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+ D A++Y++ GDGG G ++FRREKF+E GGP GG+GGRGG+VW NLN+L FR Sbjct: 1 MRCFDTARIYLKGGDGGNGCVAFRREKFVEHGGPSGGNGGRGGNVWAVVDPNLNSLSVFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGIS---LICDLDQEGQRIIL 117 Q HF+A+ G G N GA ED+++ VP GT + +D + +L + G++ +L Sbjct: 61 GQVHFRAEGGVNGQGSNCEGADAEDLIVPVPAGTIIRRKDAEEDEPPLAELLKPGEKALL 120 Query: 118 APGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 A GG GG GN FK+S ++AP A G G+E + L+LK++AD GIIG+PNAGKST L+ Sbjct: 121 AVGGRGGRGNFSFKTSRDRAPTIAEKGEKGEELWVDLELKVVADAGIIGVPNAGKSTLLS 180 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 +T A+PKIA+YPFTTL PNLG+ + Y + AD+PG+++ AH+G G+G FL+H +R Sbjct: 181 VITAARPKIANYPFTTLVPNLGVCEMDYSTTVFADVPGLLEGAHEGLGLGHEFLRHVQRC 240 Query: 238 HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 VL+H+V + + I EL +N +L+ K ++V +++D DS D + +L Sbjct: 241 RVLVHVVDGTSPDPVGDFNAINLELELFNPDLKDKPQLVAYNKVDIPDSGDFWEMVREQL 300 Query: 297 ATQCGQVP----FEFSSITGHGIPQILECLH 323 T+ G VP F S+ TG G+ +++ + Sbjct: 301 TTELG-VPADRIFPISAATGQGVIELVRAVR 330 >gi|78220137|gb|ABB39486.1| GTP-binding protein, GTP1/OBG family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 427 Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 150/328 (45%), Positives = 219/328 (66%), Gaps = 10/328 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + SG+GG G +SFRREKFI GGPDGG GG GG+V +A++ L +L DFR Sbjct: 62 MRFVDEAVIKAISGNGGHGCVSFRREKFIPRGGPDGGDGGNGGNVVFKASTRLLSLYDFR 121 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE--EDGI-SLICDLDQEGQRIIL 117 ++ ++A++G G G G+D+V+ +PVGT VFE E+G SLI DL + +++ Sbjct: 122 LKRVYQAENGRPGQGSQMHGRGGKDLVVEMPVGTLVFERGENGAESLIADLSEPDVEVVI 181 Query: 118 APGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 A GG GG GN HFKSST QAP ++ PG G+EK + L+LK++AD G++GLPNAGKSTF++ Sbjct: 182 AHGGRGGKGNEHFKSSTMQAPRFSQPGEPGEEKSLRLELKILADAGLLGLPNAGKSTFIS 241 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVKEGY---KEFILADIPGIIKNAHQGAGIGDRFLKHT 234 V+ AKPKIA YPFTTL PNLG++ + + + ++ADIPG+I+ AH+G G+G RFLKH Sbjct: 242 QVSAAKPKIAAYPFTTLVPNLGVMMDEFDPDRRMVIADIPGLIEGAHEGQGLGHRFLKHV 301 Query: 235 ERTHVLLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 ERT L+HI+S + EN A + I DEL ++ L + +I +++ID + + + Sbjct: 302 ERTRFLVHILSIEDVDMENPWAGFDLINDELQRFDETLGSREQIQVVNKIDLLPPEEVDG 361 Query: 292 KKNELATQCGQVPFEFSSITGHGIPQIL 319 + A G+ F S++ G G+ ++ Sbjct: 362 LRAR-AEADGRRIFFISALEGEGLDAVV 388 >gi|242240760|ref|YP_002988941.1| GTPase ObgE [Dickeya dadantii Ech703] gi|242132817|gb|ACS87119.1| GTP-binding protein Obg/CgtA [Dickeya dadantii Ech703] Length = 392 Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 141/306 (46%), Positives = 220/306 (71%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+D+V+ VPVGT++ ++ ++ D+ + QR+++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDIVIKVPVGTRIRDKGTDEILGDMTRHQQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+E+ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTSGTPGEERELLLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A +GAG+G RFL+H ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEQSFVIADIPGLIEGASEGAGLGIRFLRHLERCRV 240 Query: 240 LLHIV--SALEEN--VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + ++E+ +Q A + I++EL +Y++ L +K + +++D +D ++ E Sbjct: 241 LLHLIDLAPMDESDPIQNA-KVIVNELHSYSATLAEKPRWLVFNKVDLLDHAEGEKRAKE 299 Query: 296 LATQCG 301 +A G Sbjct: 300 IANALG 305 >gi|302036463|ref|YP_003796785.1| GTPase involved in DNA replication and ribosome assembly [Candidatus Nitrospira defluvii] gi|300604527|emb|CBK40859.1| GTPase involved in DNA replication and ribosome assembly [Candidatus Nitrospira defluvii] Length = 343 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 146/334 (43%), Positives = 224/334 (67%), Gaps = 8/334 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ ++ +++G GG G SFRREKF+ GGPDGG GG GG V ++AT+ L+TL+D RYQ Sbjct: 4 FVDQVQILVKAGHGGNGACSFRREKFVPRGGPDGGDGGDGGSVVVEATTRLSTLLDLRYQ 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H++A+ GE G N G +G DV + VPVGT VF+E+ L+ DL ++G+ ++A GG Sbjct: 64 KHYEAEKGETGGGSNCHGRRGADVRIPVPVGTMVFDENTQELLADLTKDGESCVIAKGGQ 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F +STN+ P PG G+E+++ L LKL+AD+G++G PNAGKST +A+V+ A Sbjct: 124 GGRGNTQFATSTNRVPTQFEPGTPGEERLLRLDLKLLADVGLVGYPNAGKSTLIAAVSAA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADYPFTTL PNLG+V+ G + F++ADIPG+I+ AH+G G+G +FL+H ERT +LL Sbjct: 184 RPKIADYPFTTLTPNLGVVRWTGEQTFVIADIPGLIEGAHEGKGLGFQFLRHIERTSLLL 243 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ E E+ ++ + + EL+AY+ L + V +++D + + L R K Sbjct: 244 HVIDISEWATEDPVSSLEIMRHELTAYDDALTARPFAVVGTKLDVKGAGERLERLKK--Y 301 Query: 298 TQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 Q ++P F S+ T G+ + + + ++ +R Sbjct: 302 CQRRKIPFFAISAATREGLDECIRYMGQQVELLR 335 >gi|320181458|gb|EFW56376.1| GTPase ObgE [Shigella boydii ATCC 9905] Length = 386 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 205/290 (70%), Gaps = 6/290 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D Sbjct: 241 LLHLIDIDPIDGTDPVENA-RIIISELEKYSQDLAAKPRWLVFNKIDLLD 289 >gi|218701952|ref|YP_002409581.1| GTPase ObgE [Escherichia coli IAI39] gi|261266773|sp|B7NKQ0|OBG_ECO7I RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|218371938|emb|CAR19794.1| GTPase involved in cell partioning and DNA repair [Escherichia coli IAI39] Length = 390 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 205/290 (70%), Gaps = 6/290 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D Sbjct: 241 LLHLIDIDPIDGTDPVKNA-RIIISELEKYSQDLAAKPRWLVFNKIDLLD 289 >gi|160947226|ref|ZP_02094393.1| hypothetical protein PEPMIC_01159 [Parvimonas micra ATCC 33270] gi|158446360|gb|EDP23355.1| hypothetical protein PEPMIC_01159 [Parvimonas micra ATCC 33270] Length = 421 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 143/320 (44%), Positives = 208/320 (65%), Gaps = 6/320 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+ +++G GG G +SFRREK+ GGP GG GG GG V + + TL+DFRY+ Sbjct: 2 FIDIAKIELKAGKGGDGCVSFRREKYEPDGGPYGGDGGDGGSVIFISDEGVRTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+ AQ+GE G + + G KGED+++ VPVGT + + + +I D + I+A GG Sbjct: 62 KHYFAQNGENGKTKKQYGKKGEDLIVKVPVGTLIKDFETNRVIHDFKVKDDEFIVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F +ST QAP +A PG G+E+ I L+LKLIAD+G++GLPN GKS+ L+ ++ A Sbjct: 122 GGKGNARFATSTRQAPRFAQPGTKGEERTIKLELKLIADVGLVGLPNVGKSSLLSVLSDA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+ + E K F++ADIPG+I+ A +G G+G FLKH ERT +L+ Sbjct: 182 KPKIANYHFTTLEPNLGVCRVEENKSFVIADIPGLIEGASEGIGLGFEFLKHVERTRLLV 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+ VS +E + Y I EL YN ++ K EI+ ++ID + SD ++ E Sbjct: 242 HVLDVSGIEGRDPIEDYNTIYKELELYNENIKNKKEIIVANKIDLLTSDDNLKRVKEYFK 301 Query: 299 QCGQVPFEFSSITGHGIPQI 318 + E S++T G+ ++ Sbjct: 302 D--RTVLEISAVTQKGVKEL 319 >gi|300721526|ref|YP_003710801.1| putative GTP-binding protein with nucleoside triP hydrolase domain [Xenorhabdus nematophila ATCC 19061] gi|297628018|emb|CBJ88567.1| putative GTP-binding protein with nucleoside triP hydrolase domain [Xenorhabdus nematophila ATCC 19061] Length = 388 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 139/305 (45%), Positives = 211/305 (69%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEARILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+D+ + VPVGT+V + ++ D+ + QR ++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGQDITIKVPVGTRVRDIGTGEVLGDMLRHEQRFMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQRTMGTPGESRELMLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEQSFVVADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ E N + I+ EL Y+ +L +K + +++D +DS+ ++ + Sbjct: 241 LLHLIDLCPIDESNPVENARIIIRELYKYSEKLAEKPRWLVFNKVDLIDSEEAKQRAKAI 300 Query: 297 ATQCG 301 A + G Sbjct: 301 ADELG 305 >gi|295426310|ref|ZP_06818970.1| obg family GTPase CgtA [Lactobacillus amylolyticus DSM 11664] gi|295064049|gb|EFG54997.1| obg family GTPase CgtA [Lactobacillus amylolyticus DSM 11664] Length = 436 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 149/342 (43%), Positives = 224/342 (65%), Gaps = 11/342 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EKF+ GGP GG GGRGG + A S L TL+DFRY+ Sbjct: 4 FVDQTKIEVQAGKGGDGMVAFRHEKFVPNGGPAGGDGGRGGSIIFVADSGLRTLMDFRYR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA +GE G + + G +D+ L VPVGT V++ D +I DL + GQ +++A GG Sbjct: 64 RKFKADNGENGRIKAQYGRAAKDLYLKVPVGTTVYDFDTNEVIGDLVENGQELVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +S N AP A G G+++++ L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 124 GGRGNIHFANSVNTAPEIAENGEPGEDRVLRLELKMLADVGLVGFPSVGKSTLLSVVTKA 183 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+I+ A QG G+G +FL+H ERT V+ Sbjct: 184 KPKIAAYQFTTLTPNLGMVILPDG-RDFSMADLPGLIEGASQGVGLGMQFLRHIERTKVI 242 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK-KNEL 296 LH+VS N + A Y I EL+ Y ++L KK E++ +Q+D +D ++ K+ L Sbjct: 243 LHLVSMDPNNGREAIEDYHVIKKELANYATDLTKKRELIVATQMDIPGADQKYQEFKDAL 302 Query: 297 ATQ-CGQVPFEFSSITGHGIPQILE---CLHDKIFSIRGENE 334 A + G+ + SS+T GI +++ L +K+ R + E Sbjct: 303 AQEKIGEPVYAISSVTHQGINELMRDAANLVEKVEEERSQTE 344 >gi|238761755|ref|ZP_04622729.1| Uncharacterized GTP-binding protein yhbZ [Yersinia kristensenii ATCC 33638] gi|238699869|gb|EEP92612.1| Uncharacterized GTP-binding protein yhbZ [Yersinia kristensenii ATCC 33638] Length = 389 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 142/292 (48%), Positives = 211/292 (72%), Gaps = 6/292 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGD+++ A NLNTLID+ Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDIYLLADENLNTLIDYH 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F+A+ G+ G R+ +G +G+D+ + VPVGT++ ++ ++ D+ + GQR ++A G Sbjct: 61 FVKSFRAERGQNGQSRDCTGKRGKDITIKVPVGTRILDQGTGEIVGDMTRHGQRQMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GFHGLGNARFKSSVNRAPRQKTMGTEGETRDLTLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ Y++ F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVRMDYEQSFVVADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIV--SALEEN--VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V + ++E+ VQ A + I++EL Y+ L KK + ++ID +D + Sbjct: 241 LLHLVDLAPIDESDPVQNA-KVIINELQQYSENLAKKPRWLVFNKIDLLDPE 291 >gi|56421141|ref|YP_148459.1| GTPase ObgE [Geobacillus kaustophilus HTA426] gi|261418379|ref|YP_003252061.1| GTPase ObgE [Geobacillus sp. Y412MC61] gi|297529231|ref|YP_003670506.1| GTP-binding protein Obg/CgtA [Geobacillus sp. C56-T3] gi|319767662|ref|YP_004133163.1| GTP-binding protein Obg/CgtA [Geobacillus sp. Y412MC52] gi|81819657|sp|Q5KWP5|OBG_GEOKA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|56380983|dbj|BAD76891.1| Spo0B-associated GTP-binding protein [Geobacillus kaustophilus HTA426] gi|261374836|gb|ACX77579.1| GTP-binding protein Obg/CgtA [Geobacillus sp. Y412MC61] gi|297252483|gb|ADI25929.1| GTP-binding protein Obg/CgtA [Geobacillus sp. C56-T3] gi|317112528|gb|ADU95020.1| GTP-binding protein Obg/CgtA [Geobacillus sp. Y412MC52] Length = 432 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 144/326 (44%), Positives = 216/326 (66%), Gaps = 5/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G ++FRREK++ GGP GG GG+GGDV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGKGGDVVFVVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM +N+ G ED+++ VP GT V + D ++ DL + GQR ++A GG Sbjct: 62 RHFKAPRGENGMSKNQHGKNAEDLIVKVPPGTVVIDADTNEVLADLTEAGQRFVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F +++N AP A G G+E+ I L+LKL+AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNTRFATASNPAPEIAENGEPGEERNIILELKLLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V+ E + F++AD+PG+I+ AHQG G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTLVPNLGVVETEDGRSFVMADLPGLIEGAHQGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ +A+E + Y I +EL YN L ++ +IV +++D +++ R+ E Sbjct: 242 HVIDMAAVEGRDPYNDYLVINEELKQYNLRLTERPQIVAANKMDMPNAEENLRRFKEKVG 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHD 324 V F S+ T G+ ++L + D Sbjct: 302 DAVPV-FPISAATRQGVRELLFAIAD 326 >gi|308174489|ref|YP_003921194.1| GTPase [Bacillus amyloliquefaciens DSM 7] gi|307607353|emb|CBI43724.1| GTPase involved in cell partioning and DNA repair [Bacillus amyloliquefaciens DSM 7] gi|328554408|gb|AEB24900.1| GTPase CgtA [Bacillus amyloliquefaciens TA208] gi|328912812|gb|AEB64408.1| GTPase involved in cell partioning and DNA repair [Bacillus amyloliquefaciens LL3] Length = 428 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 146/322 (45%), Positives = 214/322 (66%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KVY++ GDGG G ++FRREK++ GGP GG GG GGDV + L TL+DFRYQ Sbjct: 2 FVDQVKVYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGNGGDVIFEVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM +N+ G ED+V+ VP GT V ++D +I DL + GQR ++A GG Sbjct: 62 RHFKAIRGEHGMSKNQHGRNAEDMVVKVPPGTVVTDDDTKQVIADLTEHGQRAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G G+E+ I L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNTRFATPANPAPQLSEHGEPGKERYIVLELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+V+ + + F++AD+PG+I+ AH+G G+G +FL+H ERT V++ Sbjct: 182 KPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLIEGAHEGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 H++ SA+E + Y I ELS YN L ++ +I+ +++D + ++ L K +L Sbjct: 242 HVIDMSAMEGRDPYEDYVTINQELSEYNLRLTERPQIIVANKMDMPEATENLKAFKEKL- 300 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 Q F S++T G+ +L Sbjct: 301 -QDDHPVFPISAVTREGLRDLL 321 >gi|289522885|ref|ZP_06439739.1| Obg family GTPase CgtA [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503909|gb|EFD25073.1| Obg family GTPase CgtA [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 429 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 144/336 (42%), Positives = 220/336 (65%), Gaps = 3/336 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D A++ + +G GG G +SFRREK++ GGPDGG+GGRGG+V+I+A+ + TL DF Sbjct: 1 MKFIDRAEIIVHAGHGGKGCMSFRREKYVPKGGPDGGNGGRGGNVYIKASDKIQTLEDFT 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+ FKAQ G+ G KRN+SG GED+++ VP GT V++ + + DL G +++A G Sbjct: 61 YKTQFKAQSGQDGRKRNQSGKDGEDLIIEVPCGTIVWDAESGEPLGDLVDPGDSLLVALG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F + NQAP ++ G GQ K + L+LK++AD+ IIGLPN GKS+ LAS++ Sbjct: 121 GRGGRGNAAFSTPVNQAPRFSEKGEEGQTKYLILELKILADVAIIGLPNVGKSSLLASLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTT+ PNLG+++E LADIPG+I+ A + G+G FL+H ER+ + Sbjct: 181 NAKPKIADYPFTTINPNLGVIQEDDFRITLADIPGLIEGASENKGLGLSFLRHIERSRFI 240 Query: 241 LHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH++ +N++ + + +E+S YN ++ KK ++ ++ D +D + + + A Sbjct: 241 LHVLDVSSHSIDNIEEQWITLREEISKYNDQILKKPSLLVANKTDLIDDASFLDQVAKWA 300 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 + Q S++TG GI ++ E L K+ + +N Sbjct: 301 EKSKQEICFTSTVTGRGIKELAELLLQKLSKLTPDN 336 >gi|196250127|ref|ZP_03148821.1| GTP-binding protein Obg/CgtA [Geobacillus sp. G11MC16] gi|196210311|gb|EDY05076.1| GTP-binding protein Obg/CgtA [Geobacillus sp. G11MC16] Length = 433 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 143/326 (43%), Positives = 217/326 (66%), Gaps = 5/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G ++FRREK++ GGP GG GG+GGDV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGKGGDVVFVVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM +N+ G ED+++ VP GT V + D ++ DL ++GQR ++A GG Sbjct: 62 RHFKAPRGENGMSKNQHGKNAEDLLVKVPPGTVVIDADTNEVLADLTEQGQRFVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S+ N AP A G G+E+ + L+LKL+AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNTRFASAANPAPEIAENGEPGEERNVILELKLLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V+ E + F++AD+PG+I+ AH+G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTLVPNLGVVETEDGRSFVMADLPGLIEGAHEGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ +A+E + Y I +EL YN L ++ +IV +++D +++ R+ E Sbjct: 242 HVIDMAAVEGRDPYDDYVVINEELKQYNLRLTERPQIVAANKMDMPNAEENLRRFKEKVG 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHD 324 + V F S+ T G+ ++L + D Sbjct: 302 EAVPV-FPISAATRQGVRELLFAIAD 326 >gi|311745709|ref|ZP_07719494.1| Obg family GTPase CgtA [Algoriphagus sp. PR1] gi|126575152|gb|EAZ79502.1| Obg family GTPase CgtA [Algoriphagus sp. PR1] Length = 331 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 147/310 (47%), Positives = 205/310 (66%), Gaps = 8/310 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K RSG GGAG + FRREK + GGPDGG GGRGG + ++ + TL+ +Y+ Sbjct: 6 FIDYVKFCSRSGAGGAGSLHFRREKHVPKGGPDGGDGGRGGHIILRGNAQHWTLLHLKYK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+ G+ G R GA G+D++L VP+GT + + C++ ++GQ +IL GG Sbjct: 66 KHVIAESGKGGEGGRRKGADGKDIILDVPLGTVAKDAETGEKRCEITEDGQEVILTKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+STNQAP+Y+ PG G E+ I L+LKL+AD+G++G PNAGKST L+S++ A Sbjct: 126 GGLGNDHFKTSTNQAPHYSQPGEEGIEEWIILELKLLADVGLVGFPNAGKSTLLSSISAA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGY---KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 KP+I DYPFTTL PNLG+V GY K F++ADIPGII+ A +G G+G RFL+H ER + Sbjct: 186 KPEIGDYPFTTLVPNLGVV--GYRDDKSFVMADIPGIIEGASEGKGLGIRFLRHIERNSI 243 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LL +V ++Q YQ +L EL YN EL K I+ +S+ D +D + + K++L Sbjct: 244 LLFMVPVDAPSIQEQYQILLGELEKYNPELLDKQRILAVSKSDMLDEELMGEMKSDLPE- 302 Query: 300 CGQVPFEFSS 309 VP+ F S Sbjct: 303 --GVPYVFIS 310 >gi|323466677|gb|ADX70364.1| GTPase obg [Lactobacillus helveticus H10] Length = 452 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 145/324 (44%), Positives = 215/324 (66%), Gaps = 8/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EK++ GGP GG GGRGG + A S L TL+DFRY+ Sbjct: 22 FVDQTKIEVQAGKGGDGMVAFRHEKYVPNGGPAGGDGGRGGSIIFVADSGLRTLMDFRYR 81 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA GE G +++ G +D+ L VPVGT V++ + LI DL ++GQ +++A GG Sbjct: 82 RKFKADSGENGRIKSQYGRAAKDLYLKVPVGTTVYDFNTGELIGDLVEKGQELVVAKGGR 141 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +S N AP A G G+++++ L+LKL+AD+G++G P+ GKST L+ T+A Sbjct: 142 GGRGNIHFATSVNTAPEIAENGEPGEDRVLRLELKLLADVGLVGFPSVGKSTLLSVTTKA 201 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+I+ A QG G+G +FL+H ERT V+ Sbjct: 202 KPKIAAYEFTTLTPNLGMVILPDG-RDFSMADLPGLIEGASQGVGLGIQFLRHVERTKVI 260 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 LH+VS N + A Y I +EL Y ++L KK E++ SQ+D + + LA K L Sbjct: 261 LHLVSMDPNNGREAIEDYHTIKNELKNYETDLSKKRELIVASQMDISGAEEKLAAFKKAL 320 Query: 297 ATQCGQVP-FEFSSITGHGIPQIL 319 + P +E SS+T G+ +++ Sbjct: 321 KEEGNNEPVYEISSVTHKGVSKLM 344 >gi|254229736|ref|ZP_04923144.1| GTP-binding protein Obg/CgtA [Vibrio sp. Ex25] gi|262392445|ref|YP_003284299.1| GTP-binding protein Obg [Vibrio sp. Ex25] gi|269964670|ref|ZP_06178908.1| GTP1/Obg family protein [Vibrio alginolyticus 40B] gi|151937703|gb|EDN56553.1| GTP-binding protein Obg/CgtA [Vibrio sp. Ex25] gi|262336039|gb|ACY49834.1| GTP-binding protein Obg [Vibrio sp. Ex25] gi|269830569|gb|EEZ84790.1| GTP1/Obg family protein [Vibrio alginolyticus 40B] Length = 391 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 152/331 (45%), Positives = 219/331 (66%), Gaps = 8/331 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA V +++GDGG+G +SF REKFI GGPDGG GG GGDV+IQA NLNTLID+R Sbjct: 1 MKFVDEAVVKVQAGDGGSGVVSFWREKFITKGGPDGGDGGDGGDVYIQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ GE G N +G +G+D+VL VPVGT+ + ++ ++ + G+++++A G Sbjct: 61 FQRFYEAERGENGRGGNCTGKRGKDIVLRVPVGTRAVDIHTNEIVAEVAEHGKKVMIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + I L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQRTLGTKGEVREIRLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + + VQ A I+DEL Y+ +L K + +++D + + K E Sbjct: 241 LLHMIDIMPIDQSDPVQNAL-TIIDELEQYSEKLASKPRWLVFNKVDLMPEEEANEKIQE 299 Query: 296 LATQCGQVP--FEFSSITGHGIPQILECLHD 324 + G F+ S+I +G ++ L D Sbjct: 300 ILDALGWEDEYFKISAINRNGTKELCYKLAD 330 >gi|238787582|ref|ZP_04631380.1| Uncharacterized GTP-binding protein yhbZ [Yersinia frederiksenii ATCC 33641] gi|238724369|gb|EEQ16011.1| Uncharacterized GTP-binding protein yhbZ [Yersinia frederiksenii ATCC 33641] Length = 390 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 139/291 (47%), Positives = 206/291 (70%), Gaps = 4/291 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGD+++ A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDIYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F+A+ G+ G R+ +G +G+D+ + VPVGT+V ++ ++ D+ + GQR+++A G Sbjct: 61 FVKSFRAERGQNGQSRDCTGRRGQDITIKVPVGTRVLDQGTGEILGDMTRHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKTMGTEGETRDLTLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ +++ F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVRMDHEQSFVVADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V E + + I++EL Y+ L +K + ++ID VD + Sbjct: 241 LLHLVDLAPIDESDPVENAKIIINELQQYSENLAEKPRWLVFNKIDLVDPE 291 >gi|217076847|ref|YP_002334563.1| GTPase ObgE [Thermosipho africanus TCF52B] gi|261277718|sp|B7IGK8|OBG_THEAB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|217036700|gb|ACJ75222.1| Spo0B-associated GTP-binding protein [Thermosipho africanus TCF52B] Length = 434 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 145/326 (44%), Positives = 216/326 (66%), Gaps = 5/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +Y++ G GG G SFR EK++ GGPDGG GG GG V+++A NL+TL+ + Sbjct: 6 FIDRIVIYVKGGKGGDGSASFRHEKYVPKGGPDGGDGGNGGYVFLKANPNLSTLLSVSEK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A++GE G + G G+DVV+ VPVGT V + + +I DLD+ G + +A GG Sbjct: 66 KKYIAENGENGKGKKMHGRNGKDVVIDVPVGTVVKDFETGEIIADLDKPGMVVCVARGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSST +AP + G G+E+ + L+LKL+AD+G++G PN GKS+F++ ++ A Sbjct: 126 GGRGNVHFKSSTMRAPKISERGFEGEERKLVLELKLLADVGLVGYPNVGKSSFISKISNA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIA+YPFTT PNLG+V +F++ADIPG+IK A +GAG+G+ FL+H ER V+ H Sbjct: 186 RPKIANYPFTTTIPNLGVVTVNELQFVVADIPGLIKGASKGAGLGNVFLRHVERCSVIAH 245 Query: 243 IV--SALE--ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 IV S +E + VQ Y I +EL ++SEL +K EI+ ++ID + + L ++ +L Sbjct: 246 IVDISGMEGRDPVQ-DYFDIRNELEHFSSELAQKEEIIIANKIDLISKEELEKRLEKLRK 304 Query: 299 QCGQVPFEFSSITGHGIPQILECLHD 324 + G+ F S ITG GI +I+ L + Sbjct: 305 ETGKQIFPTSIITGEGIEKIVYKLAE 330 >gi|224025341|ref|ZP_03643707.1| hypothetical protein BACCOPRO_02080 [Bacteroides coprophilus DSM 18228] gi|224018577|gb|EEF76575.1| hypothetical protein BACCOPRO_02080 [Bacteroides coprophilus DSM 18228] Length = 414 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 146/323 (45%), Positives = 212/323 (65%), Gaps = 7/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + RREK+ GGPDGG GGRGG V ++ N TL+ +Y+ Sbjct: 28 FVDYVKIYCRSGKGGRGSVHLRREKYTPNGGPDGGDGGRGGHVILRGNRNYWTLLHLKYE 87 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G K G G D V+ VP GT V+ + +CD+ + GQ +IL GG Sbjct: 88 RHVFAEHGGNGSKNKSFGKDGADKVIEVPCGTVVYNAETGEYVCDITEHGQEVILLKGGR 147 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+++T QAP +A PG QE + L+LKL+AD+G++G PNAGKST L+SV+ A Sbjct: 148 GGLGNWHFRTATRQAPRFAQPGEPMQEMTVILELKLLADVGLVGFPNAGKSTLLSSVSAA 207 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PKIA+YPFTTL PNLGIV ++G K F++ADIPGII+ A +G G+G RFL+H ER +L Sbjct: 208 RPKIANYPFTTLEPNLGIVSYRDG-KSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLL 266 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L +V ++++ Y+ +L+EL+ +N E+ K ++ +++ D +D + + K L Sbjct: 267 LFMVPGDTDDIRKEYEILLNELATFNPEMLDKQRVLAITKCDMLDDELIEMLKPTLPE-- 324 Query: 301 GQVPFEF-SSITGHGIPQILECL 322 +P+ F SS++G GI Q+ + L Sbjct: 325 -DIPYVFISSVSGMGIQQLKDLL 346 >gi|260857310|ref|YP_003231201.1| GTPase ObgE [Escherichia coli O26:H11 str. 11368] gi|260869934|ref|YP_003236336.1| GTPase ObgE [Escherichia coli O111:H- str. 11128] gi|257755959|dbj|BAI27461.1| GTPase ObgE [Escherichia coli O26:H11 str. 11368] gi|257766290|dbj|BAI37785.1| GTPase ObgE [Escherichia coli O111:H- str. 11128] gi|323154397|gb|EFZ40598.1| GTP-binding protein Obg/CgtA [Escherichia coli EPECa14] gi|323178641|gb|EFZ64217.1| GTP-binding protein Obg/CgtA [Escherichia coli 1180] Length = 390 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 139/290 (47%), Positives = 205/290 (70%), Gaps = 6/290 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT++ ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRIIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D Sbjct: 241 LLHLIDIDPIDGTDPVENA-RIIISELEKYSQDLAAKPRWLVFNKIDLLD 289 >gi|304396336|ref|ZP_07378217.1| GTP-binding protein Obg/CgtA [Pantoea sp. aB] gi|304355845|gb|EFM20211.1| GTP-binding protein Obg/CgtA [Pantoea sp. aB] Length = 390 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 139/306 (45%), Positives = 211/306 (68%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPRGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+D+ + VPVGT+V ++ + D+ + GQ++++ G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDIEVKVPVGTRVIDQGTGETLGDMTRHGQKLMVGKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N++P G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRSPRQKTMGTPGEKRDLQLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEQSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHI--VSALEEN--VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+ + ++E+ V+ A + IL EL Y+ +L K + ++ID + + + Sbjct: 241 LLHLIDIDPIDESDPVENA-RIILGELEKYSEKLFNKPRWLVFNKIDLISEEEAQSRAKA 299 Query: 296 LATQCG 301 +A G Sbjct: 300 VAEALG 305 >gi|291536200|emb|CBL09312.1| Obg family GTPase CgtA [Roseburia intestinalis M50/1] Length = 427 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 144/323 (44%), Positives = 211/323 (65%), Gaps = 6/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D A + I+SG GG G +SFRREK++ GGPDGG GGRGGD+ LNTL D+R++ Sbjct: 2 FADRATIIIKSGKGGDGHVSFRREKYVPDGGPDGGDGGRGGDIVFVVDDGLNTLTDYRHR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F AQ GE+G KRN G GED++L VP GT + + + +I D+ + +R ++ GG Sbjct: 62 RKFAAQPGEEGGKRNCHGKNGEDLILKVPAGTVIKDAESEKVIADMSGDNRRQVILKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST QAP YA PG E + L+LK+IAD+G++G PN GKST L+ VT A Sbjct: 122 GGLGNQHFATSTMQAPKYAQPGGDAIELEVKLELKVIADVGLVGFPNVGKSTLLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V +G K F++ADIPG+I+ A +G G+G FL+H ERT V++ Sbjct: 182 QPKIANYHFTTLQPNLGVVDIDGAKGFVIADIPGLIEGASEGVGLGLEFLRHIERTKVMI 241 Query: 242 HIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV--DSDTLARKKNEL 296 H+V A + A + I+ EL AY+ +L +K +++ +++D V D + + + + Sbjct: 242 HVVDAAGTEGRDPIADIRAIMKELEAYDPKLLEKPQVIAANKMDAVYGDENEIVQSLRQE 301 Query: 297 ATQCGQVPFEFSSITGHGIPQIL 319 + G F S+++G G+ ++L Sbjct: 302 FEKDGIRVFPISAVSGKGLKELL 324 >gi|329965272|ref|ZP_08302202.1| Obg family GTPase CgtA [Bacteroides fluxus YIT 12057] gi|328523292|gb|EGF50392.1| Obg family GTPase CgtA [Bacteroides fluxus YIT 12057] Length = 394 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 150/327 (45%), Positives = 212/327 (64%), Gaps = 7/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+I GGPDGG GGRGG V ++ N TL+ RY Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYIPNGGPDGGDGGRGGHVILRGNRNYWTLLHLRYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G GED V+ VP GT V+ + ICD+ + GQ +IL GG Sbjct: 66 RHIMAGHGESGSKNRSFGKDGEDKVVEVPCGTVVYNAETGEYICDVTEHGQEVILLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + ++LKL+AD+G++G PNAGKST L++V+ A Sbjct: 126 GGLGNWHFKTATRQAPRFAQPGEPMQEMTVIMELKLLADVGLVGFPNAGKSTLLSAVSSA 185 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA+YPFTTL PNLGIV ++G K F++ADIPGII+ A G G+G RFL+H ER +L Sbjct: 186 KPKIANYPFTTLEPNLGIVSYRDG-KSFVMADIPGIIEGASAGKGLGLRFLRHIERNSLL 244 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L +V A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 245 LFMVPADSDDIRKEYEILLNELRTFNPEMLDKQRVLAVTKCDMLDQELMDEIEPTLPE-- 302 Query: 301 GQVPFEF-SSITGHGIPQILECLHDKI 326 +P F S+I+G GI + + L +++ Sbjct: 303 -GIPHVFISAISGMGISVLKDILWEEL 328 >gi|253686962|ref|YP_003016152.1| GTP-binding protein Obg/CgtA [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753540|gb|ACT11616.1| GTP-binding protein Obg/CgtA [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 390 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 141/305 (46%), Positives = 211/305 (69%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+D+ + VPVGT+V ++ ++ D+ + Q +++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDITIKVPVGTRVLDQGTGEVLGDMTRHQQSLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+E+ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTSGTKGEERELTLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEQSFVVADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V E + + I++EL Y + L +K + +++D +D ++ E+ Sbjct: 241 LLHLVDLAPIDESDPVENAKIIINELEQYGAGLAEKPRWLVFNKVDLIDKAEAEKRAKEI 300 Query: 297 ATQCG 301 AT G Sbjct: 301 ATALG 305 >gi|294139560|ref|YP_003555538.1| GTP-binding protein, GTP1/Obg family [Shewanella violacea DSS12] gi|293326029|dbj|BAJ00760.1| GTP-binding protein, GTP1/Obg family [Shewanella violacea DSS12] Length = 387 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 139/304 (45%), Positives = 209/304 (68%), Gaps = 6/304 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG+G +SFRREK++ GGPDGG GG GGDV++QA + NTLIDF+ Sbjct: 1 MKFVDEAVIRVEAGDGGSGCVSFRREKYVPDGGPDGGDGGDGGDVYLQADESFNTLIDFQ 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ +A+ G+ G R+ +G G+D+VL VPVGT+ +E+ + DL GQ++++A G Sbjct: 61 FERFHRAERGKNGRGRDCTGHGGDDLVLKVPVGTRAIDEETQESLGDLTTNGQKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSTNRAPRQKTLGTPGEVRSLKLELMLLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 RA PK+ADYPFTTL PNLG+V + + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 RATPKVADYPFTTLVPNLGVVNPRHGQSFVIADIPGLIEGAADGAGLGVRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + V++A + I+ EL ++ +L K + +++ D + D L + + Sbjct: 241 LLHLIDIEPIDGSDPVESA-RAIVGELEKHSPQLAGKPRWLVINKTDLLLEDELKERVDH 299 Query: 296 LATQ 299 + + Sbjct: 300 IVKE 303 >gi|326335444|ref|ZP_08201631.1| GTP-binding protein Obg [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692210|gb|EGD34162.1| GTP-binding protein Obg [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 332 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 156/329 (47%), Positives = 212/329 (64%), Gaps = 6/329 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D KVY+RSG+GG G REKFIE GGPDGG GG+GG+V I+ NL TLI F++Q Sbjct: 6 FTDYVKVYVRSGNGGKGSAHLHREKFIEKGGPDGGDGGQGGNVVIRGNKNLWTLIHFKFQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 QHF+A+HG G +GA GE V L VP+GT + + + ++ ++ + I GG Sbjct: 66 QHFRAEHGGDGGANRSTGADGESVYLEVPLGTIIKDALTGESLFEITEDKEEKIALKGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF++S NQ P YA PG+ G+E+ + L+LK++AD+G++G PNAGKST L+ +T + Sbjct: 126 GGLGNWHFRTSINQTPRYAQPGLQGEERELLLELKVLADVGLVGFPNAGKSTLLSVLTSS 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADYPFTTL PNLGIV+ Y FI+ADIPGII+ A QG G+G FL+H ER VLL Sbjct: 186 KPKIADYPFTTLKPNLGIVQYRDYHSFIIADIPGIIEGASQGKGLGYYFLRHIERNSVLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +VS+ +++ Y +L EL YN EL K I+ +S+ D +D + EL Sbjct: 246 FLVSSDSKDIVEEYYILLSELEKYNPELLDKQRILAISKADLLDEELRNLMMKELEKSSL 305 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFSI 329 +P+ F SS+ GI Q L DK++ + Sbjct: 306 NIPYLFISSVAQQGIIQ----LKDKLWQM 330 >gi|291563408|emb|CBL42224.1| Obg family GTPase CgtA [butyrate-producing bacterium SS3/4] Length = 427 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 159/335 (47%), Positives = 219/335 (65%), Gaps = 16/335 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AKVYIRSG+GG G +SFRRE ++ GGPDGG GGRGGD+ + LNTL+DFR+ Sbjct: 2 FTDSAKVYIRSGNGGNGHVSFRRELYVPNGGPDGGDGGRGGDIIFEVDDGLNTLVDFRHV 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A++GE+G KR GA G+D+++ VP GT V + + +I D+ E +R ++ GG Sbjct: 62 RKYAAENGEEGGKRRCHGADGKDLIVRVPEGTVVKDLETGKVITDMSGENRREVILKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF ++T Q P YA PG GQE + L+LK+IAD+G++G PN GKST L+ V+ A Sbjct: 122 GGLGNMHFATATMQVPKYAQPGQPGQELWVQLELKVIADVGLVGFPNVGKSTLLSRVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL P+LG+V G F++ADIPG+I+ A +GAG+G FL+H ERT VLL Sbjct: 182 RPKIANYHFTTLNPHLGVVNLGDGNSFVMADIPGLIEGASEGAGLGHEFLRHIERTKVLL 241 Query: 242 HIVSALE-------ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLAR 291 H+V A E+V A I+DELSAYN EL K + + +++D V +D LA Sbjct: 242 HVVDAASVEGRDPIEDVHA----IMDELSAYNPELLKLPQAIAANKLDAVYDEGADPLAD 297 Query: 292 KKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 K E G F S+++G G+ +L L+D I Sbjct: 298 LKKEFEP-MGIPVFGISAVSGEGVNDLLYYLYDVI 331 >gi|154249063|ref|YP_001409888.1| GTPase ObgE [Fervidobacterium nodosum Rt17-B1] gi|261266789|sp|A7HJZ8|OBG_FERNB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|154152999|gb|ABS60231.1| GTP-binding protein Obg/CgtA [Fervidobacterium nodosum Rt17-B1] Length = 439 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 143/332 (43%), Positives = 214/332 (64%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 ++F+D +Y+++GDGG G ++FRREK+I FGGPDGG GG GG V++ A + L+TL Sbjct: 4 IEFIDVVDIYVKAGDGGNGAVTFRREKYIPFGGPDGGDGGDGGYVFLVADTTLSTLYHLT 63 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ + A++ + G R ++G G D+VL VPVGT V + D +I DLD+ G+ +A G Sbjct: 64 EKKKYFAENAQNGRSRKQNGKNGADLVLRVPVGTIVKDYDTGEIIADLDEPGKYCCVARG 123 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTNQAP +A G G+EK I L+LKL+AD+G+IG PN GKS+ ++ ++ Sbjct: 124 GKGGRGNTHFKSSTNQAPKFAEQGAKGEEKHIQLELKLLADVGLIGYPNVGKSSIISKIS 183 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERT 237 A+PKIA+YPFTTL PNLG+V G E F++ADIPG+IK A +G G+G+ FLKH ER Sbjct: 184 NARPKIANYPFTTLVPNLGVVSINGTPETSFVVADIPGLIKGASEGKGLGNVFLKHVERC 243 Query: 238 HVLLHIVSALEENVQAAYQCILD---ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 V++H++ + Q D EL ++ +L KK E++ ++ D + + + K+ Sbjct: 244 SVIVHVIDVSGSEGRDPIQDYFDIRKELEFFSKDLAKKRELIVGNKSDLLTPEEINAVKD 303 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + G+ S++TG GI ++ + D I Sbjct: 304 RFLKEIGEGILLISAVTGQGINELKYAMWDII 335 >gi|323173557|gb|EFZ59186.1| GTP-binding protein Obg/CgtA [Escherichia coli LT-68] Length = 390 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 204/290 (70%), Gaps = 6/290 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH++ + V+ A + I+ EL Y+ +L K + ++ID +D Sbjct: 241 LLHLIDIDPIDGTDPVENA-RIIISELEKYSQDLAAKPRWLVFNKIDLLD 289 >gi|16272817|ref|NP_439038.1| GTPase ObgE [Haemophilus influenzae Rd KW20] gi|260579968|ref|ZP_05847798.1| obg family GTPase CgtA [Haemophilus influenzae RdAW] gi|1176187|sp|P44915|OBG_HAEIN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|1573894|gb|AAC22533.1| GTP-binding protein (yhbZ) [Haemophilus influenzae Rd KW20] gi|260093252|gb|EEW77185.1| obg family GTPase CgtA [Haemophilus influenzae RdAW] Length = 390 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 154/340 (45%), Positives = 219/340 (64%), Gaps = 6/340 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE+ + I +GDGG G +SFRREKFI GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFIDESLIRIEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A+ GE G + +G +G+D++L VPVGT+ + D + DL Q GQ++++A G Sbjct: 61 FNKRFAAERGENGRSSDCTGRRGKDIILPVPVGTRAIDNDTKETLGDLTQHGQKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLLLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDDSHSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V N I EL Y+ +L +K + ++IDT+ + + E+ Sbjct: 241 LIHLVDIAPIDGSNPADNMAIIESELFQYSEKLSEKPRWLVFNKIDTMSDEEAEERAREI 300 Query: 297 ATQCG--QVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 A Q G + + S+ TG + + + D I + E E Sbjct: 301 AEQLGWEEDYYFISAATGKNVSPLCRDIMDFIIANPREAE 340 >gi|68304936|gb|AAY89947.1| predicted GTP-binding protein, GTP1/Obg family [uncultured bacterium BAC13K9BAC] Length = 338 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 141/328 (42%), Positives = 215/328 (65%), Gaps = 5/328 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +R+G+GG+G +SFRREK+I FGGPDGG GG GG + I+ T NLNTL DF+ Sbjct: 1 MKFIDETVITVRAGNGGSGCLSFRREKYIPFGGPDGGDGGDGGSIIIKGTDNLNTLADFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + FKA++G+ G +N+ G G+D+V+ +P+G +++ + + DLD E + + G Sbjct: 61 NKSLFKAENGKSGGSKNKHGRNGDDLVINLPLGCVIYDNETDEELFDLDDESKTFTIVKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G+GN FK+STN+AP G G+ + I + LK++AD+G++GLPNAGKS+FL +V+ Sbjct: 121 GEHGYGNVRFKTSTNRAPRKKTNGKEGECREIKIILKVLADVGLVGLPNAGKSSFLQAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADY FTTL PNLG+V Y++F++ADIPGII+ A +G G+G RFLKH RT + Sbjct: 181 MARPKVADYEFTTLTPNLGVVLYSDYEKFVVADIPGIIEGASKGVGLGIRFLKHISRTKM 240 Query: 240 LLHIV---SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LL+I+ S E++ I EL++Y+ L KK + + +++ID ++ L K Sbjct: 241 LLNIIDCASKSYEDITKEMDKIKIELNSYDESLLKKDKWIVINKIDLLEKKDLEDLKKSF 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHD 324 V F S+I GI ++ +++ Sbjct: 301 DKIKLNVYF-ISTINKTGIKELTNEIYE 327 >gi|78484688|ref|YP_390613.1| GTPase ObgE [Thiomicrospira crunogena XCL-2] gi|123555993|sp|Q31IT4|OBG_THICR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|78362974|gb|ABB40939.1| GTP-binding protein, GTP1/Obg family [Thiomicrospira crunogena XCL-2] Length = 346 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 135/286 (47%), Positives = 198/286 (69%), Gaps = 4/286 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + + +G GG G SFRREK+I FGGP+GG GG GG +++ A N+NTLIDFR Sbjct: 1 MQFVDEANIRVEAGRGGNGVASFRREKYIPFGGPNGGDGGDGGSIYLIADRNINTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +KAQ+G+ GM + ++G G+D+++ VP GT V + D +I DL + GQ++++A G Sbjct: 61 YTRDYKAQNGQAGMGQQKTGRAGQDLIIPVPEGTIVRDLDTQEMIGDLVEHGQKLLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN HFKSSTN+ P PG G E+ + L+L ++AD+G++G+PNAGKS+ + +V+ Sbjct: 121 GRHGLGNVHFKSSTNRTPRQCTPGEPGDERNLGLELSVLADVGLLGMPNAGKSSLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+A+YPFTTLYPNLG+V+ F++ADIPG+I+ A +GAG+G +FLKH RT + Sbjct: 181 AARPKVANYPFTTLYPNLGVVRVSPESSFVIADIPGLIEGASEGAGLGVQFLKHLSRTGL 240 Query: 240 LLHIVS-ALEENVQA--AYQCILDELSAYNSELRKKIEIVGLSQID 282 LLH+V A + V + I EL Y+ L K + L++ D Sbjct: 241 LLHVVDIAPMDGVDPVESVHVIEKELEKYSDALAGKERWLVLNKTD 286 >gi|212690826|ref|ZP_03298954.1| hypothetical protein BACDOR_00313 [Bacteroides dorei DSM 17855] gi|212666615|gb|EEB27187.1| hypothetical protein BACDOR_00313 [Bacteroides dorei DSM 17855] Length = 413 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 150/323 (46%), Positives = 211/323 (65%), Gaps = 7/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK++ GGPDGG GGRGG V ++ N TL+ +Y Sbjct: 25 FVDYVKIYCRSGKGGRGSAHMRREKYVPNGGPDGGDGGRGGHVILRGNRNYWTLLHLKYD 84 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HG G K G GED V+ VP GT V+ + ICD+ + GQ I L GG Sbjct: 85 RHVFATHGGNGSKNKSFGKDGEDKVIEVPCGTVVYNAETGEYICDITEHGQEITLLKGGR 144 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+++T QAP +A PG QE ++ L+LKL+AD+G++G PNAGKST L++V+ A Sbjct: 145 GGLGNWHFRTATRQAPRFAQPGEPMQELMVILELKLLADVGLVGFPNAGKSTLLSTVSAA 204 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PKIA+YPFTTL PNLGIV +EG K F++ADIPGII+ A +G G+G RFL+H ER +L Sbjct: 205 RPKIANYPFTTLEPNLGIVSYREG-KSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLL 263 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L +V ++++ Y+ +L+EL+ +N E+ K ++ +++ D +D + +A + T Sbjct: 264 LFMVPGDTDDIRKEYEILLNELATFNPEMLDKQRVLAITKSDMLDEELIAMLE---PTLP 320 Query: 301 GQVPFEF-SSITGHGIPQILECL 322 VP F SS+TG GI Q+ + L Sbjct: 321 DNVPHIFISSVTGLGIQQLKDIL 343 >gi|325661648|ref|ZP_08150272.1| GTPase obg [Lachnospiraceae bacterium 4_1_37FAA] gi|331084757|ref|ZP_08333845.1| GTPase obg [Lachnospiraceae bacterium 9_1_43BFAA] gi|325472175|gb|EGC75389.1| GTPase obg [Lachnospiraceae bacterium 4_1_37FAA] gi|330410851|gb|EGG90273.1| GTPase obg [Lachnospiraceae bacterium 9_1_43BFAA] Length = 428 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 146/336 (43%), Positives = 216/336 (64%), Gaps = 11/336 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+YIRSG GG G SFRRE ++ GGPDGG GG+GGDV + LNTL D+R++ Sbjct: 2 FADRAKIYIRSGKGGDGHASFRRELYVPNGGPDGGDGGKGGDVIFEVDDGLNTLADYRHR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ GE+G KR G D++L VP GT + E + +I D+ E +R ++ GG Sbjct: 62 RKYVAKDGEQGGKRRCHGKNAPDIILKVPEGTIIKEAESDKVIADMSGENRRQVILRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF ++T Q P YA PG QE + L+LK+IAD+G+IG PN GKSTFL+ VT A Sbjct: 122 GGLGNQHFATATMQVPKYAQPGQPAQELWVNLELKVIADVGLIGFPNVGKSTFLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 PKIA+Y FTTL PNLG+V K+G F++ADIPG+I+ A QG G+G FL+H ERT ++ Sbjct: 182 NPKIANYHFTTLNPNLGVVDFKDGGDGFVIADIPGLIEGASQGVGLGYEFLRHIERTKMM 241 Query: 241 LHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKK 293 +H+V A + ++ Y+ I EL YNSE+ K+ +++ ++ D + D D + + + Sbjct: 242 IHVVDAASSEGRDPIEDIYK-INAELENYNSEIAKRPQVIAANKTDLIYAEDEDPVEKIR 300 Query: 294 NELATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 E + +V F S ++G G+ ++L + +++ ++ Sbjct: 301 AEFEPKGIKV-FPISGVSGEGVQELLYYVREQLKTL 335 >gi|325846499|ref|ZP_08169414.1| Obg family GTPase CgtA [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481257|gb|EGC84298.1| Obg family GTPase CgtA [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 427 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 138/334 (41%), Positives = 220/334 (65%), Gaps = 6/334 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 +D AK+ +++G GG G ++FRREK+ GGP GG GG G ++I+AT++L+TL +FRY+ Sbjct: 1 MIDNAKIELQAGKGGDGAVAFRREKYEPTGGPAGGDGGDGASIYIKATNSLSTLEEFRYK 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++A +GE GM + R G KGED+ L VPVGT + E +I D + G+ ++A GG Sbjct: 61 TKYRASNGEDGMGKKRFGKKGEDLYLFVPVGTIIRESTSGKIIKDFKKNGEEFLIAKGGR 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+KSST QAP +A G GQ+ + L+LK++AD+G++GLPN GKST ++ +++A Sbjct: 121 GGKGNVHYKSSTRQAPRFAQKGKEGQKITVNLELKILADVGLVGLPNVGKSTLISVISKA 180 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+VK + + FI+ADIPG+I+ A++G G+G FLKH +R +L+ Sbjct: 181 KPKIANYHFTTLDPNLGVVKIDKERSFIVADIPGLIEGANEGLGLGHDFLKHVQRCKILV 240 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V S E + ++ I +EL ++ L K +I+ L++ D ++ R +++ + Sbjct: 241 HLVDISGFEGRDPIEDFELINNELKLFDENLANKYQIIALNKSDLDSNENYKRFEDKFSD 300 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + F S+ T GI ++++ + + ++S E Sbjct: 301 KYK--IFRISAATTSGIKELIDEVSNVLYSFDDE 332 >gi|288555335|ref|YP_003427270.1| GTPase CgtA [Bacillus pseudofirmus OF4] gi|288546495|gb|ADC50378.1| GTPase ObgE [Bacillus pseudofirmus OF4] Length = 428 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 142/328 (43%), Positives = 214/328 (65%), Gaps = 5/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KVY++ GDGG G +++RREK++ GGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDKVKVYVKGGDGGNGMVAYRREKYVPDGGPAGGDGGKGASVVFEVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE G +++ G D+V+ VP GT V ++ +I DL + GQR ++A GG Sbjct: 62 RHFKAPRGEHGRSKSQHGKNSPDMVVKVPPGTTVLDDQTGQVIADLTEHGQRAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNTRFATPVNPAPEIAENGEPGQERDVVLELKVLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTT+ PNLG+V+ E ++ F++AD+PG+I+ AHQG G+G +FL+H ERT V++ Sbjct: 182 KPKIADYHFTTITPNLGVVETEDHRSFVMADLPGLIEGAHQGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ SALE + Y I +EL YN L ++ +++ +++D DS+ + E Sbjct: 242 HMIDMSALEGRDPYEDYLKINEELKQYNMRLLERPQLIVANKMDMPDSEENLKNFKEKME 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ F S++T G+ +L + DKI Sbjct: 302 DDVEI-FPISTVTRQGLRDLLLTIADKI 328 >gi|138896173|ref|YP_001126626.1| GTPase ObgE [Geobacillus thermodenitrificans NG80-2] gi|261266802|sp|A4IRC7|OBG_GEOTN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|134267686|gb|ABO67881.1| Spo0B-associated GTP-binding protein [Geobacillus thermodenitrificans NG80-2] Length = 433 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 142/326 (43%), Positives = 217/326 (66%), Gaps = 5/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G ++FRREK++ GGP GG GG+GGDV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGKGGDVVFVVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM +N+ G ED+++ VP GT V + D ++ DL ++GQR ++A GG Sbjct: 62 RHFKAPRGENGMSKNQHGKNAEDLLVKVPPGTVVIDADTNEVLADLTEQGQRFVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++ N AP A G G+E+ + L+LKL+AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNTRFATAANPAPEIAENGEPGEERNVILELKLLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V+ E + F++AD+PG+I+ AH+G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTLVPNLGVVETEDGRSFVMADLPGLIEGAHEGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ +A+E + Y I +EL YN L ++ +IV +++D +++ R+ E Sbjct: 242 HVIDMAAVEGRDPYDDYVVINEELKQYNLRLTERPQIVAANKMDMPNAEENLRRFKEKVG 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHD 324 + V F S+ T G+ ++L + D Sbjct: 302 EAVPV-FPISAATRQGVRELLFAIAD 326 >gi|307129373|ref|YP_003881389.1| GTPase involved in cell partioning and DNA repair [Dickeya dadantii 3937] gi|306526902|gb|ADM96832.1| GTPase involved in cell partioning and DNA repair [Dickeya dadantii 3937] Length = 391 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 139/305 (45%), Positives = 213/305 (69%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+D+ + VPVGT+V ++ ++ D+ + Q++++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDITIKVPVGTRVLDKSTGEVLGDMTRNQQKLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN+ FKSS N+AP G G+E+ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNSRFKSSVNRAPRQKTNGTPGEERELMLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEKSFVVADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ E + + I++EL Y++ L +K + +++D ++ ++ E+ Sbjct: 241 LLHLIDLAPIDESDPIENAKVIVNELQQYSASLAEKPRWLVFNKVDLLEKGEAEKRAKEI 300 Query: 297 ATQCG 301 A G Sbjct: 301 AVALG 305 >gi|315038178|ref|YP_004031746.1| GTPase ObgE [Lactobacillus amylovorus GRL 1112] gi|312276311|gb|ADQ58951.1| GTPase ObgE [Lactobacillus amylovorus GRL 1112] Length = 434 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 144/324 (44%), Positives = 214/324 (66%), Gaps = 8/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EK++ GGP GG GGRGG + A S L TL+DFRY+ Sbjct: 4 FVDQTKIEVQAGKGGDGMVAFRHEKYVPNGGPAGGDGGRGGSIIFVADSGLRTLMDFRYR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA +GE G +++ G +D+ L VPVGT V++ + LI DL ++GQ +++A GG Sbjct: 64 RKFKADNGENGRIKSQYGRAAKDLYLKVPVGTTVYDFNTGELIGDLVEKGQELVVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +S N AP A G G+++++ L+LKL+AD+G++G P+ GKST L+ T+A Sbjct: 124 GGRGNIHFATSVNTAPEIAENGEPGEDRVLRLELKLLADVGLVGFPSVGKSTLLSVTTKA 183 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+I+ A QG G+G +FL+H ERT V+ Sbjct: 184 KPKIAAYQFTTLTPNLGMVILPDG-RDFSMADLPGLIEGASQGVGLGIQFLRHVERTKVI 242 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT-LARKKNEL 296 LH+VS N + A Y I EL Y ++L KK E++ SQ+D ++ L K L Sbjct: 243 LHLVSMDPNNGREAIDDYHTIRKELQNYETDLSKKRELIVASQMDIPSAENKLKEFKEAL 302 Query: 297 ATQCGQVP-FEFSSITGHGIPQIL 319 + P +E SS+T G+ +++ Sbjct: 303 QKEGNDEPVYEISSVTHQGVSKLM 326 >gi|291538936|emb|CBL12047.1| Obg family GTPase CgtA [Roseburia intestinalis XB6B4] Length = 427 Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 144/323 (44%), Positives = 211/323 (65%), Gaps = 6/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D A + I+SG GG G +SFRREK++ GGPDGG GGRGGD+ LNTL D+R++ Sbjct: 2 FADRATIIIKSGKGGDGHVSFRREKYVPDGGPDGGDGGRGGDIVFVVDDGLNTLTDYRHR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F AQ GE+G KRN G GED++L VP GT + + + +I D+ + +R ++ GG Sbjct: 62 RKFAAQPGEEGGKRNCHGKNGEDLILKVPAGTVIKDAESGKVIADMSGDNRRQVILKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST QAP YA PG E + L+LK+IAD+G++G PN GKST L+ VT A Sbjct: 122 GGLGNQHFATSTMQAPKYAQPGGDAIELEVKLELKVIADVGLVGFPNVGKSTLLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V +G K F++ADIPG+I+ A +G G+G FL+H ERT V++ Sbjct: 182 QPKIANYHFTTLQPNLGVVDLDGAKGFVIADIPGLIEGASEGVGLGLEFLRHIERTKVMI 241 Query: 242 HIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV--DSDTLARKKNEL 296 H+V A + A + I+ EL AY+ +L +K +++ +++D V D + + + + Sbjct: 242 HVVDAAGTEGRDPIADIRAIMKELEAYDPKLLEKPQVIAANKMDAVYGDENEIVQSLRQE 301 Query: 297 ATQCGQVPFEFSSITGHGIPQIL 319 + G F S+++G G+ ++L Sbjct: 302 FEKDGIRVFPISAVSGKGLKELL 324 >gi|52081272|ref|YP_080063.1| GTPase ObgE [Bacillus licheniformis ATCC 14580] gi|52786651|ref|YP_092480.1| GTPase ObgE [Bacillus licheniformis ATCC 14580] gi|319644762|ref|ZP_07998995.1| obg protein [Bacillus sp. BT1B_CT2] gi|81825236|sp|Q65GM7|OBG_BACLD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|52004483|gb|AAU24425.1| GTPase Obg [Bacillus licheniformis ATCC 14580] gi|52349153|gb|AAU41787.1| Obg [Bacillus licheniformis ATCC 14580] gi|317392571|gb|EFV73365.1| obg protein [Bacillus sp. BT1B_CT2] Length = 428 Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 145/328 (44%), Positives = 216/328 (65%), Gaps = 5/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G ++FRREK++ GGP GG GG+GGDV + L+TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGKGGDVVFKVDEGLSTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM +N+ G ED+V+ VP GT V ++D +I DL + GQ ++A GG Sbjct: 62 RHFKAARGEHGMSKNQHGRNAEDMVVKVPPGTVVIDDDTKQVIADLTEHGQEAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G G+E+ I L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNTRFATPANPAPQLSENGEPGKERYIVLELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+V+ E + F++AD+PG+I+ AH+G G+G +FL+H ERT V++ Sbjct: 182 KPKIADYHFTTLNPNLGMVETEDGRSFVMADLPGLIEGAHEGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ S LE + Y I EL YN L ++ +I+ +++D D++ + E T Sbjct: 242 HVIDMSGLEGRDPYEDYVTINKELEQYNLRLTERPQIIVANKMDMPDAEENLKAFKEKLT 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKI 326 V F S++T G+ +L + D++ Sbjct: 302 DDYPV-FPISAVTRQGLRDLLFEIADRL 328 >gi|261491989|ref|ZP_05988565.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261312360|gb|EEY13487.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 388 Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 148/332 (44%), Positives = 215/332 (64%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREKFI GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRVEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ + A GE G +G +G+D+ L VPVGT+ + D +I DL + G ++++A G Sbjct: 61 FEKRYTAGRGENGRSAGCTGHRGQDITLRVPVGTRAIDNDTQEIIGDLTRHGMKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTNGTPGEKRDLKLELLLLADVGMLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+ + G + F++ADIPG+I+ A GAG+G RFLKH ER + Sbjct: 181 AAKPKVADYPFTTLVPSLGVARVGADRSFVVADIPGLIEGAADGAGLGIRFLKHLERCRI 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V + E + I EL Y+ +L +K + ++IDT+ + A + ++ Sbjct: 241 LIHLVDIMPIDESDPAHNISVIESELYQYSEKLAEKPIWLVFNKIDTIGEEEAAERAKDI 300 Query: 297 ATQCGQVP--FEFSSITGHGIPQILECLHDKI 326 A Q G + S+ TG + + + D I Sbjct: 301 AEQIGWEGDYYLISAATGQNVQALTRDIMDFI 332 >gi|27262240|gb|AAN87401.1| SPO0B-associated GTP-binding protein [Heliobacillus mobilis] Length = 443 Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 143/322 (44%), Positives = 212/322 (65%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+AK++++ GDGG G SFRREK++ GGP+GG GG GG+V L TL+DFRYQ Sbjct: 2 FYDQAKIFVKGGDGGNGVASFRREKYVPEGGPNGGDGGSGGNVIFIGDEGLRTLVDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KA+ GE GM +N G GED+ + VP+GT V + + +LI D+ Q++I+A GG Sbjct: 62 RHYKAERGEHGMGKNMHGRNGEDMTVKVPIGTVVKDAETNALIADITSHNQKVIVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F SS N+AP + G G E+ + L+LK++AD+G++G PN GKST +++V+ A Sbjct: 122 GGRGNAKFVSSVNRAPTISENGEPGAERWLELELKVLADVGLVGFPNVGKSTIISAVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V+ G + F++ADIPG+I+ AH GAG+G FL+HTERT L+ Sbjct: 182 KPKIANYHFTTLEPNLGVVRLGEGQSFVMADIPGLIEGAHAGAGLGHDFLRHTERTRFLI 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKKNELA 297 H+ +S E + + I EL+ Y +L +K +V +++D ++ L R + +L Sbjct: 242 HVLDISGSEGRDPLEDFDGINKELALYKPDLAEKPMVVAANKMDLPGAEGNLERLREKLG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + + F S+ T G+ +L Sbjct: 302 EEY--LIFPVSAATTEGLEPLL 321 >gi|261495283|ref|ZP_05991735.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309048|gb|EEY10299.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. OVINE] Length = 388 Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 148/332 (44%), Positives = 215/332 (64%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREKFI GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRVEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ + A GE G +G +G+D+ L VPVGT+ + D +I DL + G ++++A G Sbjct: 61 FEKRYAAGRGENGRSAGCTGHRGQDITLRVPVGTRAIDNDTQEIIGDLTRHGMKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTNGTPGEKRDLKLELLLLADVGMLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+ + G + F++ADIPG+I+ A GAG+G RFLKH ER + Sbjct: 181 AAKPKVADYPFTTLVPSLGVARVGADRSFVVADIPGLIEGAADGAGLGIRFLKHLERCRI 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V + E + I EL Y+ +L +K + ++IDT+ + A + ++ Sbjct: 241 LIHLVDIMPIDESDPAHNISVIESELYQYSEKLAEKPIWLVFNKIDTIGEEEAAERAKDI 300 Query: 297 ATQCGQVP--FEFSSITGHGIPQILECLHDKI 326 A Q G + S+ TG + + + D I Sbjct: 301 AEQIGWEGDYYLISAATGQNVQALTRDIMDFI 332 >gi|167752101|ref|ZP_02424228.1| hypothetical protein ALIPUT_00343 [Alistipes putredinis DSM 17216] gi|167660342|gb|EDS04472.1| hypothetical protein ALIPUT_00343 [Alistipes putredinis DSM 17216] Length = 333 Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 153/329 (46%), Positives = 216/329 (65%), Gaps = 8/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K++ RSG GG+G FRREKF+EFGGPDGG GGRGG + ++ S TLI +YQ Sbjct: 6 FVDYVKIFARSGHGGSGSAHFRREKFVEFGGPDGGDGGRGGHIILRGDSQYWTLIHLKYQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGT---QVFEEDGISLICDLDQEGQRIILAP 119 +H A+ GE G SG G+D+V+ VP+GT +V E+ ++ +G+ ++L Sbjct: 66 RHQFAEDGEGGSGARSSGKNGKDIVIPVPLGTVARRVLEDGTTEYAGEVTADGEELVLLK 125 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG GN HFK+STNQAP YA PG QE L+LK++AD+G++G PNAGKST L+ V Sbjct: 126 GGRGGLGNWHFKTSTNQAPRYAQPGEDRQEGTFILELKVLADVGLVGFPNAGKSTLLSVV 185 Query: 180 TRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 + AKPKIA+Y FTTL PNLGIV+ + F++ADIPGII+ AH+G G+G RFL+H ER Sbjct: 186 SAAKPKIANYAFTTLEPNLGIVECRDHHSFVMADIPGIIEGAHEGKGLGTRFLRHIERNS 245 Query: 239 VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 VLL ++ A ++++ Y +L EL+ YN EL K ++ +++ D +D D + K+ L Sbjct: 246 VLLFMIPADSDDIRKDYAVLLGELTQYNPELLDKERLLAITKCDMLDEDLIEEMKSHLPE 305 Query: 299 QCGQVPFEF-SSITGHGIPQILECLHDKI 326 VP F SSI+G IP++ + L + + Sbjct: 306 ---GVPSVFISSISGMNIPRLKDMLWEAL 331 >gi|254361174|ref|ZP_04977318.1| possible GTP-binding protein [Mannheimia haemolytica PHL213] gi|153092665|gb|EDN73714.1| possible GTP-binding protein [Mannheimia haemolytica PHL213] Length = 388 Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 148/332 (44%), Positives = 215/332 (64%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREKFI GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRVEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ + A GE G +G +G+D+ L VPVGT+ + D +I DL + G ++++A G Sbjct: 61 FEKRYAAGRGENGRSAGCTGHRGQDITLRVPVGTRAIDNDTQEIIGDLTRHGMKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTNGTPGEKRDLKLELLLLADVGMLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+ + G + F++ADIPG+I+ A GAG+G RFLKH ER + Sbjct: 181 AAKPKVADYPFTTLVPSLGVARVGADRSFVVADIPGLIEGAADGAGLGIRFLKHLERCRI 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V + E + I EL Y+ +L +K + ++IDT+ + A + ++ Sbjct: 241 LIHLVDIMPIDESDPAHNISVIESELYQYSEKLAEKPIWLVFNKIDTIGEEEAAERAKDI 300 Query: 297 ATQCGQVP--FEFSSITGHGIPQILECLHDKI 326 A Q G + S+ TG + + + D I Sbjct: 301 AEQIGWEGDYYLISAATGQNVQALTRDIMDFI 332 >gi|306821095|ref|ZP_07454711.1| obg family GTPase CgtA [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550788|gb|EFM38763.1| obg family GTPase CgtA [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 426 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 150/327 (45%), Positives = 209/327 (63%), Gaps = 7/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+ ++ GDGG G ++FRRE ++ GGP GG GG GG+V +A NL TL+DF+Y+ Sbjct: 2 FVDIAKISVKGGDGGNGCVAFRREIYVPAGGPAGGDGGHGGNVVFKADYNLRTLLDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + AQ GE G N G GED+V+ VPVGT + + D +I DL Q +I+A GG Sbjct: 62 KKYNAQSGEDGKGSNMFGKNGEDLVIKVPVGTIIRDADSNLVIADLSTNEQEVIVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FKSS QAP +A G GQE I L+LKL+AD+G+IG PN GKSTFL+ VT+A Sbjct: 122 GGKGNTNFKSSVRQAPSFAKSGTKGQELDIVLELKLLADVGLIGFPNVGKSTFLSIVTKA 181 Query: 183 KPKIADYPFTTLYPNLGI--VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 PKIA+Y FTTL PNLG+ +K G F++ADIPG+I+ A +G G+G FL+H +RT VL Sbjct: 182 SPKIANYHFTTLTPNLGVASLKNG-TSFVIADIPGLIEGASEGVGLGFDFLRHIQRTKVL 240 Query: 241 LHIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +HIV S E + ++ I +EL Y+ +L K +IV +++D + + + + Sbjct: 241 IHIVDISGCEGRDPIEDFEAINEELGRYSEKLISKKQIVVANKMDLLQDEKVFEDFKKEI 300 Query: 298 TQCGQVPFEFSSITGHGIPQIL-ECLH 323 + G F S+ T GI IL EC + Sbjct: 301 EERGYKVFAMSNATTRGIEDILNECSY 327 >gi|258591125|emb|CBE67420.1| GTP-binding protein with nucleoside triP hydrolase domain; DNA-binding GTPase involved in cell partioning; multicopy suppresssor of ftsJ(rrmJ) [NC10 bacterium 'Dutch sediment'] Length = 353 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 140/327 (42%), Positives = 214/327 (65%), Gaps = 4/327 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DEA++ + +GDGG G +SFRRE ++ GGPDGG GG GG V++ A+ + TL D YQ Sbjct: 2 FVDEARIRVEAGDGGRGCVSFRREAYVPRGGPDGGDGGDGGSVYVVASRSYRTLDDQTYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H++AQ+G G + G +G ++++VP+GT V +++ L+ DL ++G ++++A GG Sbjct: 62 RHYRAQNGVHGRGKTMHGRRGATLIVSVPLGTVVVDDETGELLGDLVEDGVQLLVARGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F + T QAP YA PG GQ++ + L LKL+AD+G+IGLPNAGKS L ++ A Sbjct: 122 GGRGNARFATPTRQAPRYAQPGESGQKRRLHLTLKLLADVGLIGLPNAGKSALLCCISAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 + K+A+YPFTTL P+LG V+ + F++ADIPG+I+ A GAG+G RFL+H ERT +L Sbjct: 182 QSKVAEYPFTTLTPHLGTVEIDSLGAFVVADIPGLIEGASSGAGLGIRFLRHIERTRLLA 241 Query: 242 HI--VSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 H+ VS + A I +EL A+N EL ++ I+ ++ID L+ + L + Sbjct: 242 HVIDVSDTARDPLEALSVIEEELRAFNPELLERPRIIAANKIDLPHDRHLSVLR-ALCAE 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKI 326 G F S++T G+ Q++ L D++ Sbjct: 301 RGLPLFPLSAMTAEGVQQLVGHLADRL 327 >gi|58581245|ref|YP_200261.1| GTPase ObgE [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623165|ref|YP_450537.1| GTPase ObgE [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188575768|ref|YP_001912697.1| GTPase ObgE [Xanthomonas oryzae pv. oryzae PXO99A] gi|75435962|sp|Q5H2E5|OBG_XANOR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|123522552|sp|Q2P5B4|OBG_XANOM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277750|sp|B2STC0|OBG_XANOP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|58425839|gb|AAW74876.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367105|dbj|BAE68263.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188520220|gb|ACD58165.1| GTP-binding protein Obg/CgtA [Xanthomonas oryzae pv. oryzae PXO99A] Length = 350 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 148/322 (45%), Positives = 207/322 (64%), Gaps = 9/322 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MK +DEA++ + +G GG G + FRREKFI GGPDGG GG GG VWI A N+NTL+DFR Sbjct: 1 MKLVDEAEILVTAGHGGNGCVGFRREKFIPLGGPDGGDGGSGGSVWIVADENVNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ FKAQ GE GM R G GED ++ VPVGT V +I DL + G R+++A G Sbjct: 61 HERTFKAQRGENGMGRQAYGKGGEDRIIVVPVGTVVINVQTDEVIGDLTRHGDRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + G G+E+++ L+L+L+AD+G++G PNAGKST + +V+ Sbjct: 121 GKGGLGNMHFKSSVNRAPRQSTTGEEGEERLLKLELRLLADVGLLGFPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTLYPNLG+V E Y+ F++AD+PG+I+ A GAG+G +FL+H +RT + Sbjct: 181 SATPKVADYPFTTLYPNLGVVSVEAYRSFVIADVPGLIEGAADGAGLGTQFLRHLQRTRL 240 Query: 240 LLHIVSALE-----ENVQAAYQC--ILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 LLH+V + V A Q + EL ++ +L KK + L++ D + D Sbjct: 241 LLHLVDMAPMDGGVDGVSPADQVRTLERELERHDPQLLKKPRWLVLNKADLMFEDEARAA 300 Query: 293 KNELATQCG-QVPFEFSSITGH 313 + + G P+ S G Sbjct: 301 AETIVAELGWTAPWYLVSALGR 322 >gi|270265046|ref|ZP_06193309.1| GTPase ObgE [Serratia odorifera 4Rx13] gi|270040980|gb|EFA14081.1| GTPase ObgE [Serratia odorifera 4Rx13] Length = 390 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 139/288 (48%), Positives = 205/288 (71%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEAAILVVAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+D+ + VPVGT+V ++ ++ D+ + GQ++++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDITVKVPVGTRVQDQGTGEILGDMTRHGQQLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + I L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTLGTAGEARDILLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ +++ F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDHEQSFVVADIPGLIEGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH+V E N + I++EL+ Y+ L +K + +++D V Sbjct: 241 LLHLVDIAPIDESNPVENAKVIINELNQYSENLAQKPRWLVFNKVDLV 288 >gi|123440800|ref|YP_001004791.1| GTPase ObgE [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332160066|ref|YP_004296643.1| GTPase ObgE [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|261277754|sp|A1JIV6|OBG_YERE8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|122087761|emb|CAL10547.1| putative GTP-binding protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318607374|emb|CBY28872.1| GTP-binding protein Obg [Yersinia enterocolitica subsp. palearctica Y11] gi|325664296|gb|ADZ40940.1| GTPase ObgE [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862043|emb|CBX72209.1| uncharacterized GTP-binding protein yhbZ [Yersinia enterocolitica W22703] Length = 390 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 139/288 (48%), Positives = 203/288 (70%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGD+++ A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDIYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F+A+ GE G R+ +G +G+D+ + VPVGT+V ++ ++ D+ + GQR+++A G Sbjct: 61 FVKSFRAERGENGQSRDCTGKRGKDITIKVPVGTRVLDQGTGEIVGDMTRHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKTMGTEGETRELMLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ +++ F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVRMDHEQSFVVADIPGLIEGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH+V E + + I++EL Y+ L +K + ++ID V Sbjct: 241 LLHLVDLAPIDESDPVENAKIIINELQQYSENLAQKPRWLVFNKIDLV 288 >gi|265756865|ref|ZP_06090853.1| obg family GTPase CgtA [Bacteroides sp. 3_1_33FAA] gi|263233651|gb|EEZ19271.1| obg family GTPase CgtA [Bacteroides sp. 3_1_33FAA] Length = 394 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 150/323 (46%), Positives = 211/323 (65%), Gaps = 7/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK++ GGPDGG GGRGG V ++ N TL+ +Y Sbjct: 6 FVDYVKIYCRSGKGGRGSAHMRREKYVPNGGPDGGDGGRGGHVILRGNRNYWTLLHLKYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HG G K G GED V+ VP GT V+ + ICD+ + GQ I L GG Sbjct: 66 RHVFATHGGNGSKNKSFGKDGEDKVIEVPCGTVVYNAETGEYICDITEHGQEITLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+++T QAP +A PG QE ++ L+LKL+AD+G++G PNAGKST L++V+ A Sbjct: 126 GGLGNWHFRTATRQAPRFAQPGEPMQELMVILELKLLADVGLVGFPNAGKSTLLSTVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PKIA+YPFTTL PNLGIV +EG K F++ADIPGII+ A +G G+G RFL+H ER +L Sbjct: 186 RPKIANYPFTTLEPNLGIVSYREG-KSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLL 244 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L +V ++++ Y+ +L+EL+ +N E+ K ++ +++ D +D + +A + T Sbjct: 245 LFMVPGDTDDIRKEYEILLNELATFNPEMLDKQRVLAITKSDMLDEELIAMLE---PTLP 301 Query: 301 GQVPFEF-SSITGHGIPQILECL 322 VP F SS+TG GI Q+ + L Sbjct: 302 DNVPHIFISSVTGLGIQQLKDIL 324 >gi|237708209|ref|ZP_04538690.1| GTPase ObgE [Bacteroides sp. 9_1_42FAA] gi|237723740|ref|ZP_04554221.1| GTPase ObgE [Bacteroides sp. D4] gi|229437951|gb|EEO48028.1| GTPase ObgE [Bacteroides dorei 5_1_36/D4] gi|229457762|gb|EEO63483.1| GTPase ObgE [Bacteroides sp. 9_1_42FAA] Length = 394 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 150/323 (46%), Positives = 211/323 (65%), Gaps = 7/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK++ GGPDGG GGRGG V ++ N TL+ +Y Sbjct: 6 FVDYVKIYCRSGKGGRGSAHMRREKYVPNGGPDGGDGGRGGHVILRGNRNYWTLLHLKYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HG G K G GED V+ VP GT V+ + ICD+ + GQ I L GG Sbjct: 66 RHVFATHGGNGSKNKSFGKDGEDKVIEVPCGTVVYNAETGEYICDITEHGQEITLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+++T QAP +A PG QE ++ L+LKL+AD+G++G PNAGKST L++V+ A Sbjct: 126 GGLGNWHFRTATRQAPRFAQPGEPMQELMVILELKLLADVGLVGFPNAGKSTLLSTVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PKIA+YPFTTL PNLGIV +EG K F++ADIPGII+ A +G G+G RFL+H ER +L Sbjct: 186 RPKIANYPFTTLEPNLGIVSYREG-KSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLL 244 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L +V ++++ Y+ +L+EL+ +N E+ K ++ +++ D +D + +A + T Sbjct: 245 LFMVPGDTDDIRKEYEILLNELATFNPEMLDKQRVLAITKSDMLDEELIAMLE---PTLP 301 Query: 301 GQVPFEF-SSITGHGIPQILECL 322 VP F SS+TG GI Q+ + L Sbjct: 302 DNVPHIFISSVTGLGIQQLKDIL 324 >gi|58337245|ref|YP_193830.1| GTPase ObgE [Lactobacillus acidophilus NCFM] gi|75432946|sp|Q5FKH5|OBG_LACAC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|58254562|gb|AAV42799.1| GTP binding protein [Lactobacillus acidophilus NCFM] Length = 433 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 143/324 (44%), Positives = 216/324 (66%), Gaps = 8/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EK++ GGP GG GGRGG + A S L TL+DFRY+ Sbjct: 4 FVDQTKIEVQAGKGGDGMVAFRHEKYVPNGGPAGGDGGRGGSIIFVADSGLRTLMDFRYR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA +GE G +++ G +D+ L VPVGT V++ + LI DL ++GQ +++A GG Sbjct: 64 RKFKADNGENGRIKSQYGRGAKDLYLKVPVGTTVYDFNTGELIGDLVEKGQELVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +S N AP A G G+++++ L+LKL+AD+G++G P+ GKST L+ T+A Sbjct: 124 GGRGNIHFATSVNTAPEIAENGEPGEDRVLRLELKLLADVGLVGFPSVGKSTLLSVTTKA 183 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+I+ A QG G+G +FL+H ERT V+ Sbjct: 184 KPKIAAYQFTTLTPNLGMVILPDG-RDFSMADLPGLIEGASQGVGLGIQFLRHVERTKVI 242 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKKNEL 296 LH+VS N + A Y I EL +Y ++L K E++ SQ+D +D LA+ + +L Sbjct: 243 LHLVSMDPNNGREAIEDYHTIRQELKSYATDLSDKRELIVASQMDIPGADKKLAQFRKDL 302 Query: 297 ATQCGQVP-FEFSSITGHGIPQIL 319 + P + SS+T G+ +++ Sbjct: 303 EKESNDEPVYAISSVTHAGVSKLM 326 >gi|164687839|ref|ZP_02211867.1| hypothetical protein CLOBAR_01483 [Clostridium bartlettii DSM 16795] gi|164603114|gb|EDQ96579.1| hypothetical protein CLOBAR_01483 [Clostridium bartlettii DSM 16795] Length = 429 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 136/321 (42%), Positives = 211/321 (65%), Gaps = 4/321 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+A++++++G+GG G +SFRREK++ GGPDGG GGRG + + + L TL+DF+Y+ Sbjct: 5 FIDKARIFVKAGNGGNGSVSFRREKYVPAGGPDGGDGGRGASIIFKVDTGLRTLMDFKYK 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + + G G K+ ++G GED+VL VP GT + +E +I DL +G ++A GG Sbjct: 65 KKYVGEPGADGSKKRQAGKNGEDLVLKVPPGTIIRDEATNLIIADLKHDGDEAVVAKGGR 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF ++ QAP +A G G+E+ + L+LK+IAD+G++G PN GKSTFL+ VT+A Sbjct: 125 GGKGNQHFANAIRQAPSFAKSGTDGEERWVILELKMIADVGLLGFPNVGKSTFLSVVTKA 184 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+VK + + F+LADIPG+I+ A +G G+G FL+H ERT VL+ Sbjct: 185 RPKIANYHFTTLTPNLGVVKTNFGDSFVLADIPGLIEGAAEGVGLGHDFLRHVERTKVLI 244 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V S +E + + I DEL YN +L + +IV ++ D + +++ + Sbjct: 245 HVVDISGIEGRDPIEDFDKINDELKLYNEKLSTRPQIVVANKADLLFDESVYENFKKTLE 304 Query: 299 QCGQVPFEFSSITGHGIPQIL 319 G F+ S+ T G+ ++ Sbjct: 305 DRGYKVFKMSAATRDGVDDVI 325 >gi|293393166|ref|ZP_06637481.1| Spo0B-associated GTP-binding protein [Serratia odorifera DSM 4582] gi|291424312|gb|EFE97526.1| Spo0B-associated GTP-binding protein [Serratia odorifera DSM 4582] Length = 390 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 139/289 (48%), Positives = 206/289 (71%), Gaps = 4/289 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEAAILVVAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV++ VPVGT+V ++ ++ D+ + QR+++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDVIIKVPVGTRVKDQGTGEILGDMTRHEQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+E+ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTNGTPGEERDLLLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEQSFVVADIPGLIEGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 LLH+V E + + I++EL+ Y+ L +K + +++D +D Sbjct: 241 LLHLVDIAPIDESDPVENARVIVNELNQYSENLAQKPRWLVFNKVDLLD 289 >gi|269103555|ref|ZP_06156252.1| GTP-binding protein Obg [Photobacterium damselae subsp. damselae CIP 102761] gi|268163453|gb|EEZ41949.1| GTP-binding protein Obg [Photobacterium damselae subsp. damselae CIP 102761] Length = 391 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 143/301 (47%), Positives = 208/301 (69%), Gaps = 6/301 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK++ GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEAVIRVDAGDGGNGVVSFRREKYVPKGGPDGGDGGDGGDVYLVADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ + A+ GE G N +G +GED++L+VPVGT+ +E+ +I DL + G ++++A G Sbjct: 61 FQRFYAAERGENGRGGNCTGKRGEDIILSVPVGTRAVDEETGEVIADLTEHGMKLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKTMGTKGEIRHLRLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ G + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRAGADRSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ L + V+ + I++EL Y+ +L K + +++D + D K E Sbjct: 241 LLHMIDLLPADGSDPVENTF-TIINELEQYSEKLTGKPRWLVFNKVDLMPEDEANEKIQE 299 Query: 296 L 296 + Sbjct: 300 I 300 >gi|295399367|ref|ZP_06809349.1| GTP-binding protein Obg/CgtA [Geobacillus thermoglucosidasius C56-YS93] gi|312110073|ref|YP_003988389.1| GTP-binding protein Obg/CgtA [Geobacillus sp. Y4.1MC1] gi|294978833|gb|EFG54429.1| GTP-binding protein Obg/CgtA [Geobacillus thermoglucosidasius C56-YS93] gi|311215174|gb|ADP73778.1| GTP-binding protein Obg/CgtA [Geobacillus sp. Y4.1MC1] Length = 428 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 143/327 (43%), Positives = 217/327 (66%), Gaps = 7/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G ++FRREK++ GGP GG GG+GGDV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGKGGDVVFVVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM +N+ G ED+++ VP GT V + D ++ DL + GQR ++A GG Sbjct: 62 RHFKAARGENGMSKNQHGKNAEDLIVKVPPGTVVIDADTNQVLADLTENGQRFVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LKL+AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNTRFATPANPAPEIAENGEPGEERNVILELKLLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V+ + + F++AD+PG+I+ AHQG G+G +FL+H ERT V++ Sbjct: 182 KPKIAEYHFTTLVPNLGVVETDDGRSFVMADLPGLIEGAHQGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ +A+E + Y I +EL YN L ++ +I+ +++D +++ +K E Sbjct: 242 HVIDMAAIEGRDPYEDYLVINEELKQYNLRLTERPQIIAANKMDMPNAEENLKKFRE--K 299 Query: 299 QCGQVP-FEFSSITGHGIPQILECLHD 324 +VP F S++T G+ ++L + D Sbjct: 300 LGDKVPVFPISAVTRQGVRELLFAIAD 326 >gi|34556927|ref|NP_906742.1| GTPase ObgE [Wolinella succinogenes DSM 1740] gi|81653569|sp|Q7MA28|OBG_WOLSU RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|34482642|emb|CAE09642.1| PUTATIVE GTP-BINDING PROTEIN [Wolinella succinogenes] Length = 358 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 135/297 (45%), Positives = 203/297 (68%), Gaps = 5/297 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +Y+ SG GGAG +SFRREK++ GGPDGG GG+GGD++ + +N +TL F+ Sbjct: 2 FVDNVDIYVSSGKGGAGAVSFRREKYVIQGGPDGGDGGKGGDLYFEVNANTDTLSKFKGA 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H++A++G+ GM R SG GE++V+ VP GTQVF+ + L+ DL +EG R+ GG Sbjct: 62 KHYRAKNGQPGMGRRMSGKSGEEMVIVVPPGTQVFDYESNELLLDLKEEGMRVKFLEGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+S NQ P YA PGI G+E+ + L+LKLIAD+G++G PN GKST +++++ A Sbjct: 122 GGLGNYHFKNSVNQRPTYAQPGIAGEERHVRLELKLIADVGLVGFPNVGKSTLISTLSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P++A+Y FTTL P LG+V + + F++ADIPGII A +G G+G FL+H ERT LL Sbjct: 182 RPEVANYEFTTLIPALGVVDVDEFSSFVMADIPGIIGGASEGKGLGLEFLRHIERTKTLL 241 Query: 242 HIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 ++ S E ++ ++ + ELS ++ EL + + LS++D + + A +K EL Sbjct: 242 FVIDLSNYREPLE-QFEILQKELSQFSPELSLRPFGIALSKVDALSKEE-ANEKIEL 296 >gi|239827874|ref|YP_002950498.1| GTPase ObgE [Geobacillus sp. WCH70] gi|239808167|gb|ACS25232.1| GTP-binding protein Obg/CgtA [Geobacillus sp. WCH70] Length = 428 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 143/328 (43%), Positives = 216/328 (65%), Gaps = 9/328 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G ++FRREK++ GGP GG GG+GGDV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGKGGDVVFVVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM +N+ G GED+++ VP GT V + D ++ DL + GQR ++A GG Sbjct: 62 RHFKAPRGENGMSKNQHGKNGEDLIVKVPPGTVVIDADTNQVLADLTENGQRFVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LKL+AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNTRFATPANPAPEIAENGEPGEERNVILELKLLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V+ + + F++AD+PG+I+ AHQG G+G +FL+H ERT V++ Sbjct: 182 KPKIAEYHFTTLVPNLGVVETDDGRSFVMADLPGLIEGAHQGVGLGHQFLRHIERTRVIV 241 Query: 242 HIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ + Y+ I +EL YN L ++ +I+ +++D +++ +K E Sbjct: 242 HVIDMAATEGRDPYEDYLVINEELKQYNLRLTERPQIIAANKMDMPNAEENLQKFRE--- 298 Query: 299 QCG-QVP-FEFSSITGHGIPQILECLHD 324 + G VP F S++T G+ ++L + D Sbjct: 299 KIGDDVPIFPISAVTKQGVRELLFAIAD 326 >gi|300771951|ref|ZP_07081822.1| obg family GTPase CgtA [Sphingobacterium spiritivorum ATCC 33861] gi|300761337|gb|EFK58162.1| obg family GTPase CgtA [Sphingobacterium spiritivorum ATCC 33861] Length = 332 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 149/330 (45%), Positives = 212/330 (64%), Gaps = 8/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D KV RSG GGAG R+K GGPDGG GGRGG + ++ TS L TL+ +Y+ Sbjct: 7 FVDYVKVCCRSGHGGAGSAHLHRDKHTAKGGPDGGDGGRGGHIILKGTSQLWTLLHLKYR 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A +G+ G RSGA G+D +L VP+GT + + ++ D+ ++G+ IL GG Sbjct: 67 KHIIASNGDPGGSALRSGANGKDEILEVPLGTIARDAETGEVLFDITEDGETKILTAGGI 126 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKS+T Q P ++ PG G E+ + L+LK++AD+G++G PNAGKST L+ V+ A Sbjct: 127 GGLGNWHFKSATQQTPRFSQPGRPGIEQWVILELKVLADVGLVGFPNAGKSTLLSVVSAA 186 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+YPFTTL PNLGIV K F++ADIPGII+ A +G G+G RFL+H ER VLL Sbjct: 187 KPEIANYPFTTLVPNLGIVSYRDNKSFVMADIPGIIEGASEGKGLGYRFLRHIERNSVLL 246 Query: 242 HIVSA-LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +V A + + Y +L EL+AYN EL K +++ +++ D +D + +NE+ Q Sbjct: 247 FMVPADTDRTIAEEYHILLKELTAYNPELMDKPKLLAITKSDMLDEEL----ENEMKAQV 302 Query: 301 -GQVPFEF-SSITGHGIPQILECLHDKIFS 328 +P+ F SSITG I Q+ + + I S Sbjct: 303 PDNIPYIFISSITGKNILQLKDMIWKAINS 332 >gi|154686927|ref|YP_001422088.1| GTPase ObgE [Bacillus amyloliquefaciens FZB42] gi|261266667|sp|A7Z781|OBG_BACA2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|52545497|emb|CAH56427.1| spo0B-associated GTP-binding protein [Bacillus amyloliquefaciens FZB42] gi|154352778|gb|ABS74857.1| Obg [Bacillus amyloliquefaciens FZB42] Length = 428 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 145/322 (45%), Positives = 214/322 (66%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KVY++ GDGG G ++FRREK++ GGP GG GG GGDV + L TL+DFRYQ Sbjct: 2 FVDQVKVYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGNGGDVVFEVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM +N+ G +D+V+ VP GT V ++D +I DL + GQR ++A GG Sbjct: 62 RHFKAIRGEHGMSKNQHGRNADDMVVKVPPGTVVTDDDTKQVIADLTEHGQRAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G G+E+ I L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNTRFATPANPAPQLSEHGEPGKERYIVLELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+V+ + + F++AD+PG+I+ AH+G G+G +FL+H ERT V++ Sbjct: 182 KPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLIEGAHEGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 H++ SA+E + Y I ELS YN L ++ +I+ +++D + ++ L K +L Sbjct: 242 HVIDMSAMEGRDPYEDYVTINQELSEYNLRLTERPQIIVANKMDMPEAAENLKAFKEKL- 300 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 Q F S++T G+ +L Sbjct: 301 -QDDHPVFPISAVTREGLRDLL 321 >gi|240144151|ref|ZP_04742752.1| Obg family GTPase CgtA [Roseburia intestinalis L1-82] gi|257203854|gb|EEV02139.1| Obg family GTPase CgtA [Roseburia intestinalis L1-82] Length = 427 Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 144/323 (44%), Positives = 210/323 (65%), Gaps = 6/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D A + I+SG GG G +SFRREK++ GGPDGG GGRGGD+ LNTL D+R++ Sbjct: 2 FADRATIIIKSGKGGDGHVSFRREKYVPDGGPDGGDGGRGGDIVFVVDDGLNTLTDYRHR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F AQ GE+G KRN G GED++L VP GT + + + +I D+ + +R ++ GG Sbjct: 62 RKFAAQPGEEGGKRNCHGKNGEDLILKVPAGTVIKDAESGKVIADMSGDNRRQVILKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST QAP YA PG E + L+LK+IAD+G++G PN GKST L+ VT A Sbjct: 122 GGLGNQHFATSTMQAPKYAQPGGDAIELEVKLELKVIADVGLVGFPNVGKSTLLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V +G K F++ADIPG+I+ A +G G+G FL+H ERT V++ Sbjct: 182 QPKIANYHFTTLQPNLGVVDLDGAKGFVIADIPGLIEGASEGVGLGLEFLRHIERTKVMI 241 Query: 242 HIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV--DSDTLARKKNEL 296 H+V A + A + I+ EL AY+ +L +K +++ +++D V D + + + Sbjct: 242 HVVDAAGTEGRDPIADIRAIMKELEAYDPKLLEKPQVIAANKMDAVYGDENEIVQSLRRE 301 Query: 297 ATQCGQVPFEFSSITGHGIPQIL 319 + G F S+++G G+ ++L Sbjct: 302 FEKDGIRVFPISAVSGKGLKELL 324 >gi|325263958|ref|ZP_08130691.1| Obg family GTPase CgtA [Clostridium sp. D5] gi|324030996|gb|EGB92278.1| Obg family GTPase CgtA [Clostridium sp. D5] Length = 427 Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 149/325 (45%), Positives = 209/325 (64%), Gaps = 10/325 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK++IRSG GG G SFRRE ++ GGPDGG GG+GGD+ + LNTL+DFR++ Sbjct: 2 FADRAKIFIRSGKGGDGHCSFRRELYVPNGGPDGGDGGKGGDLIFEIDEGLNTLVDFRHK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A GE+G KR G G+D+VL VP GT + E +I D+ + +R I+ GG Sbjct: 62 RKYAASDGEEGGKRRCHGKDGKDLVLKVPEGTVLKESRTGKVIADMSGDNRRQIVLKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST Q P YA PG E + L+LK+IAD+G+IG PN GKST L+ VT A Sbjct: 122 GGLGNQHFATSTMQVPKYAQPGQPAMELEVNLELKVIADVGLIGFPNVGKSTLLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 PKIA+Y FTTL PNLG+V EG K F++ADIPG+I+ A +G G+G FL+H ERT +++ Sbjct: 182 DPKIANYHFTTLNPNLGVVDLEGAKGFVMADIPGLIEGASEGIGLGHEFLRHIERTKMMI 241 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKN 294 H+V A + V Y+ I EL+AYN E+ K+ +++ ++ D + D D + R + Sbjct: 242 HVVDAAGTEGRDPVDDIYK-INAELTAYNPEIAKRPQVIAANKTDLIYSEDEDPVDRLRA 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQIL 319 E + +V F S ++G GI ++L Sbjct: 301 EFEPKGMKV-FPISGVSGQGISELL 324 >gi|302386383|ref|YP_003822205.1| GTP-binding protein Obg/CgtA [Clostridium saccharolyticum WM1] gi|302197011|gb|ADL04582.1| GTP-binding protein Obg/CgtA [Clostridium saccharolyticum WM1] Length = 427 Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 147/334 (44%), Positives = 212/334 (63%), Gaps = 8/334 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK++IRSG GG G +SFRRE ++ GGPDGG GGRGGD+ + LNTL DFR+ Sbjct: 2 FADRAKIFIRSGKGGDGHVSFRRELYVPCGGPDGGDGGRGGDIIFEVDEGLNTLSDFRHI 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + AQ GE G KR G G D+V+ VP GT + + + +I D+ E +R ++ GG Sbjct: 62 HKYAAQDGESGGKRRCHGKDGGDLVIKVPEGTVIKDFESGKVIADMSGENRREVILKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+ + T QAP YA PG QE + L+LK+IAD+G++G PN GKST L+ V+ A Sbjct: 122 GGQGNMHYATPTMQAPKYAQPGQASQELWVQLELKVIADVGLVGFPNVGKSTLLSRVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL P+LG+V +G K F++ADIPG+I+ A QG G+G FL+H ERT VL+ Sbjct: 182 RPKIANYHFTTLNPHLGVVDVDGGKGFVMADIPGLIEGASQGVGLGHDFLRHIERTRVLV 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKNE 295 H+V A + A I EL AYN EL K+ +++ ++ D + D + R K E Sbjct: 242 HVVDAASTEGRDPIADIHAINKELEAYNPELLKRPQVIAANKTDAIYPDGEDPVERLKAE 301 Query: 296 LATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 Q +V + S+++G G+ ++L +++ + ++ Sbjct: 302 FEPQGVKV-YPISAVSGKGVKELLYAIYELLQTV 334 >gi|284052021|ref|ZP_06382231.1| GTPase ObgE [Arthrospira platensis str. Paraca] gi|291569765|dbj|BAI92037.1| GTP-binding protein [Arthrospira platensis NIES-39] Length = 336 Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 139/324 (42%), Positives = 219/324 (67%), Gaps = 5/324 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D ++ + +G GG G ++FRREK++ GGP GG+GGRGG V ++A +L TL+DF+ Sbjct: 1 MQFIDRTEIEVEAGKGGDGIVAFRREKYVPAGGPAGGNGGRGGSVILKAVEDLQTLLDFQ 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + FKA G++G +N++GA G D ++ VP GT V++ + ++ DL Q+ +A G Sbjct: 61 YNRRFKADDGKRGGPKNQTGASGSDRIIEVPCGTVVYDANTSEVMVDLVTPNQQFCVAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP YA PG+ G+ + + L+LKL+A++GIIGLPNAGKST +++++ Sbjct: 121 GKGGLGNTHFLSNQNRAPDYALPGLPGESRRLRLELKLLAEVGIIGLPNAGKSTLISALS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V++ + + ADIPG+I+ AH+G G+G FL+H ERT + Sbjct: 181 SARPKVADYPFTTLIPNLGVVRKPTGDGTVFADIPGLIEGAHRGTGLGHEFLRHIERTRI 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK---NEL 296 +LH++ + + A YQ I EL+AY L ++ +I+ +++ID D+ R K ++L Sbjct: 241 VLHMIDITDTDPIANYQIIQQELNAYGRGLERRRQILAINKIDAA-GDSEERTKAIASQL 299 Query: 297 ATQCGQVPFEFSSITGHGIPQILE 320 G F S++ G+ +L+ Sbjct: 300 EAIAGVKVFLISAVARIGLDALLQ 323 >gi|254282590|ref|ZP_04957558.1| GTP-binding protein Obg/CgtA [gamma proteobacterium NOR51-B] gi|219678793|gb|EED35142.1| GTP-binding protein Obg/CgtA [gamma proteobacterium NOR51-B] Length = 394 Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 149/341 (43%), Positives = 223/341 (65%), Gaps = 7/341 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G+GG G +SFRREK+I GGPDGG GG GG V + +LNT+ID+R Sbjct: 1 MKFVDEATIEVFAGNGGNGCLSFRREKYIPKGGPDGGDGGDGGSVIVCGDQSLNTMIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A++GE G RN +G KG D++L VP+GT V + + ++ D+ + QR+++A G Sbjct: 61 YTRRHRAENGEPGKGRNCTGRKGNDLLLPVPLGTTVIDTETDEVLGDIREHDQRLVVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP + G LG+ + + +LK++AD+G++GLPNAGKS+F+ +V+ Sbjct: 121 GWHGLGNTRFKSSTNRAPRQTSEGTLGESRSLKFELKVLADVGLLGLPNAGKSSFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTL PNLG+VK + ++ F++ADIPG+I A +GAG+G RFLKH R V Sbjct: 181 AATPKVADYPFTTLVPNLGVVKVDAHRSFVVADIPGLIAGASEGAGLGIRFLKHLTRNRV 240 Query: 240 LLHIVS-ALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHIV A ++ A Q I+ EL ++ L ++ + L++ D +D++ A +K + Sbjct: 241 LLHIVDMAPFDDTDPAEQALAIVRELEQFSPTLAQRPRWLLLNKKDLLDAEEFALRKASV 300 Query: 297 --ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 A ++ S+I+ G ++ L I R E EF Sbjct: 301 LQALDWDGPVYDISAISSQGTDRVSGDLMTMI-EARNEQEF 340 >gi|301154817|emb|CBW14280.1| GTPase involved in cell partioning and DNA repair [Haemophilus parainfluenzae T3T1] Length = 390 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 149/332 (44%), Positives = 218/332 (65%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREKFI GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRVEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLVADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A+ GE G + +G +G+D+ L VPVGT+ + D ++ DL + G ++++A G Sbjct: 61 FTKRFAAERGENGHSSDCTGRRGKDITLRVPVGTRAIDNDTKEVLGDLTKHGAKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLLLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDESHSFVVADIPGLIEGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHIV--SALEENVQAAYQCILD-ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V + ++E+ A I++ EL Y+ +L K + ++IDT+ + + E+ Sbjct: 241 LIHLVDINPIDESDPADNIAIIESELFQYSEKLADKPRWLVFNKIDTMTEEEAHERAQEI 300 Query: 297 ATQCGQVP--FEFSSITGHGIPQILECLHDKI 326 + G S+ TG +P + + D I Sbjct: 301 TERLGWEEGYHLISAATGKNVPPLCRDIMDFI 332 >gi|78212061|ref|YP_380840.1| GTPase ObgE [Synechococcus sp. CC9605] gi|123578747|sp|Q3AM97|OBG_SYNSC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|78196520|gb|ABB34285.1| Small GTP-binding protein domain [Synechococcus sp. CC9605] Length = 329 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 140/320 (43%), Positives = 205/320 (64%), Gaps = 1/320 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ +R G GG G +FRREK++ GGP GG GG G V ++A SNL TL+DF+ Sbjct: 1 MQFIDQARITVRGGRGGDGIAAFRREKYVPAGGPSGGDGGCGAPVVLEADSNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F A G +G +GA G+D+V+ VP GT+V L+ DL G+R+ +A G Sbjct: 61 YKRLFAADDGRRGGPNKCTGASGKDLVIKVPCGTEVRHLRTGILLGDLTAPGERLTVAFG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S+ N+AP G G+E + L+LKL+A++GIIGLPNAGKST +A ++ Sbjct: 121 GRGGLGNAHYLSNRNRAPEKFTEGREGEEWPLQLELKLLAEVGIIGLPNAGKSTLIAVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ + + ADIPG+I+ A QG+G+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRRPSGDGTVFADIPGLIEGAAQGSGLGHDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V A E+ A + EL AY L + ++ +++ + V D L + + EL Sbjct: 241 LIHLVDAGSEDPVADLNVVQQELEAYGHGLVDRPRLLVINKQELVSEDDLPKLQQELKEA 300 Query: 300 CGQVPFEFSSITGHGIPQIL 319 G+ S+ G + Q+L Sbjct: 301 SGRPVLCISAAMGTNLDQLL 320 >gi|145300246|ref|YP_001143087.1| GTPase ObgE [Aeromonas salmonicida subsp. salmonicida A449] gi|261266636|sp|A4SR17|OBG_AERS4 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|142853018|gb|ABO91339.1| GTPse, GTP1/Obg family [Aeromonas salmonicida subsp. salmonicida A449] Length = 400 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 148/326 (45%), Positives = 217/326 (66%), Gaps = 10/326 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE ++ + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEVQIRVDAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ GE G N +G +G+D +L VPVGT+ +ED L+ DL GQ++++A G Sbjct: 61 FERFHAAERGENGQSANCTGRRGKDRILRVPVGTRASDEDTGELLGDLTHHGQKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP + G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKSSGTPGEVRTLKLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V+ E + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AARPKVADYPFTTLVPNLGVVRGENSRSFVIADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV----DSDTLARK 292 L+H+V + + I+ EL Y+ EL K + +++D + + + R Sbjct: 241 LIHLVDICPVDDSDPAENAVTIVKELEKYSPELAGKPRWLVFNKMDLILEEEAVEVMERV 300 Query: 293 KNELATQCGQVPFEFSSITGHGIPQI 318 K LA + G V ++ S+I+ G ++ Sbjct: 301 KTALAYE-GPV-YQISAISKEGTKKV 324 >gi|119944300|ref|YP_941980.1| GTPase ObgE [Psychromonas ingrahamii 37] gi|261277689|sp|A1SSB6|OBG_PSYIN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|119862904|gb|ABM02381.1| GTP1/OBG sub domain protein [Psychromonas ingrahamii 37] Length = 386 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 141/291 (48%), Positives = 202/291 (69%), Gaps = 4/291 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +GDGG G I FR EK+I GGP+GG GG GGDV++QA NLNTL+DFR Sbjct: 1 MKFVDEAKIKVDAGDGGNGCIGFRTEKYIPRGGPNGGDGGDGGDVYLQADENLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + + A+ GE G R+ +G++G+D ++ VPVGT+ + D ++ DL ++GQ++++A G Sbjct: 61 FVRFYDAERGENGQTRDCTGSRGKDKIIQVPVGTRCRDADTGEVLGDLTRDGQQLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSSTN+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GFHGLGNARFKSSTNRAPRQKTDGTPGEVRNLLLELLLLADVGMLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V GY + F++ADIPG+I+ A GAG+G RFL+H ER V Sbjct: 181 AAKPKVADYPFTTLVPNLGVVSMGYGRSFVIADIPGLIEGASDGAGLGARFLRHLERCRV 240 Query: 240 LLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH + L + + I+ EL ++ +L K + ++ D + D Sbjct: 241 LLHTIDLLPADGSDPAENALVIIAELKKHSPKLASKPRWLVFNKTDLLLED 291 >gi|56963307|ref|YP_175038.1| GTPase ObgE [Bacillus clausii KSM-K16] gi|81822148|sp|Q5WHS8|OBG_BACSK RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|56909550|dbj|BAD64077.1| Spo0B-associated GTP-binding protein [Bacillus clausii KSM-K16] Length = 428 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 144/329 (43%), Positives = 218/329 (66%), Gaps = 7/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KVY + GDGG G +++RREK++ GGP GG GGRG V ++ L TL+DFRY Sbjct: 2 FVDKVKVYAKGGDGGNGMVAYRREKYVPDGGPAGGDGGRGASVILEVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFK + GE GM +N G K ED+V+ VP GT V +E+ +L+ DL GQR ++A GG Sbjct: 62 KHFKGKRGEHGMSKNMHGKKAEDLVVKVPPGTMVTDEETGALLADLTTHGQRAVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP +A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNVRFVTPANPAPDHAENGEPGEERNLLLELKVLADVGLVGFPSVGKSTLLSIVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTT+ PNLG+V + + F++AD+PG+I+ AH+G G+G +FL+H ERT V++ Sbjct: 182 KPKIAEYHFTTITPNLGVVDTQDGRSFVMADLPGLIEGAHEGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HIV SA+E + Y I +ELS YN L ++ ++V +++D ++ + L R K L Sbjct: 242 HIVDMSAMEGRDPVEDYHKINEELSQYNYRLTERPQLVVANKMDMPEANENLKRFKEALG 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI 326 + P S+IT G+ +++ + D++ Sbjct: 302 EETKIFP--VSAITKDGVRELMLAIADEL 328 >gi|296134012|ref|YP_003641259.1| GTP-binding protein Obg/CgtA [Thermincola sp. JR] gi|296032590|gb|ADG83358.1| GTP-binding protein Obg/CgtA [Thermincola potens JR] Length = 421 Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 149/326 (45%), Positives = 215/326 (65%), Gaps = 9/326 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+AK+Y++ GDGG G ++FRREK++ GGP+GG GG+GG+V QA L TL+DFRYQ Sbjct: 2 FYDQAKIYVKGGDGGNGVVAFRREKYVPEGGPNGGDGGKGGNVVFQADEGLRTLVDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KA GE G +N G ED+++ VPVGT V + + + D Q GQ ++A GG Sbjct: 62 RHYKAARGEHGGGKNMHGKNAEDLIVRVPVGTVVKDAETGEFLADFTQHGQTAVIARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F ++ N+AP +A G G+E+ + L+LK++AD+G+IG PN GKST ++ V+ A Sbjct: 122 GGRGNARFATAQNKAPAFAEKGEPGEERWVELELKVLADVGLIGFPNVGKSTLISVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGI--VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIADY FTTL PNLG+ V EG K F++ADIPG+I+ AH GAG+G FL+HTERT VL Sbjct: 182 KPKIADYHFTTLVPNLGVVFVDEG-KSFVMADIPGLIEGAHAGAGLGHDFLRHTERTRVL 240 Query: 241 LHI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 +H+ +S E + Y+ I EL YN EL ++I+++ +++D + + LAR + L Sbjct: 241 VHVLDISGSEGRDPIEDYKTINHELQLYNEELAQRIQVIAANKMDLPGAEENLARLQEYL 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECL 322 + P S+ G+ ++ L Sbjct: 301 GDKHEIFP--MSAAVAEGVKPLVYRL 324 >gi|325479286|gb|EGC82382.1| Obg family GTPase CgtA [Anaerococcus prevotii ACS-065-V-Col13] Length = 426 Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 145/326 (44%), Positives = 218/326 (66%), Gaps = 6/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 +D AKV +++GDGG G +++RREK+ GGP GG GG GG + I+AT NL+TL +FRY+ Sbjct: 1 MIDYAKVSLKAGDGGNGAVAWRREKYEPSGGPAGGDGGNGGSIIIRATRNLSTLDEFRYK 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++KAQ+GE G K + G KG+D+++ VPVGT + E ++I DL+ +G+ I+A GG Sbjct: 61 TNYKAQNGEAGGKSKKFGRKGDDLIINVPVGTLIRESLSNTIIKDLNTDGEEFIIAKGGR 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+S QAP +A G GQE + +LK++AD+G++GLPN GKST ++ +++A Sbjct: 121 GGRGNVHFKNSIRQAPRFAENGKKGQEIEVIFELKILADVGLVGLPNVGKSTLISVISKA 180 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTT+ PNLG+V + + FI+ADIPG+I+ A++G G+G FLKH ER VL+ Sbjct: 181 KPKIANYHFTTIDPNLGVVNIDRERSFIVADIPGLIEGANEGNGLGHDFLKHVERCRVLV 240 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V S +E N + I +EL YN +L +K IV L++ D S+ E Sbjct: 241 HLVDISGIEGRNPIEDFNMINEELKLYNEKLSEKPMIVALNKSDLDFSNNCDVFIREFGD 300 Query: 299 QCGQVPFEFSSITGHGIPQILECLHD 324 + Q+ F+ S+ T GI ++++ + + Sbjct: 301 KY-QI-FKISAATTSGIKELVDAISE 324 >gi|307824933|ref|ZP_07655155.1| GTP-binding protein Obg/CgtA [Methylobacter tundripaludum SV96] gi|307733980|gb|EFO04835.1| GTP-binding protein Obg/CgtA [Methylobacter tundripaludum SV96] Length = 344 Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 149/328 (45%), Positives = 221/328 (67%), Gaps = 11/328 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA+V + +GDGG G I FRREK+I GGPDGG GG GG V++ A N+NTL+DFR Sbjct: 1 MRFVDEAEVRVEAGDGGNGTIGFRREKYIPMGGPDGGDGGDGGSVYLIAAENVNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +AQ G+ GM RN +G KG+D + VP+GTQV + + +I DL + GQ +++A G Sbjct: 61 YHAVHRAQRGQNGMSRNCTGRKGDDCYVPVPLGTQVSDAETGEVIGDLTEIGQTLLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP A+ G G+ + + L+L LIAD+G++G+PNAGKS+ + SV+ Sbjct: 121 GFHGLGNTRFKSSVNRAPQKASKGSEGEHRRLNLELTLIADVGLLGMPNAGKSSLIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTL+PNLG+V + + F++ADIPG+I+ A +GAG+G +FLKH RT + Sbjct: 181 AATPKVADYPFTTLHPNLGVVSVDDLRSFVIADIPGVIEGAAEGAGLGLQFLKHLLRTGL 240 Query: 240 LLHIV-----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 LLH++ ++E VQAA + I+ E+ ++ EL K + L++ID + D + + Sbjct: 241 LLHLIDVEPYESMESPVQAAKK-IIHEVEKWSDELAAKPRWLVLNKIDRLPVDEVDERCQ 299 Query: 295 ELATQ---CGQVPFEFSSITGHGIPQIL 319 + + G V F+ ++I G G +++ Sbjct: 300 AIVDELEWTGPV-FKIAAINGDGTRELM 326 >gi|187934231|ref|YP_001884785.1| GTPase ObgE [Clostridium botulinum B str. Eklund 17B] gi|261266736|sp|B2TK70|OBG_CLOBB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|187722384|gb|ACD23605.1| GTPase, Obg family [Clostridium botulinum B str. Eklund 17B] Length = 428 Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 142/323 (43%), Positives = 214/323 (66%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AKV+I+SG GG G ISFRREK++ GGP+GG GG GGD+ +Q + + TL+DF+Y+ Sbjct: 2 FIDKAKVFIKSGKGGDGAISFRREKYVPLGGPNGGDGGDGGDIILQVDTGITTLLDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A+ GE G G G+D+++ VP+GT + EE+ +I DL ++GQ +L GG Sbjct: 62 KKFIAEDGENGGASKCYGRAGQDLIIKVPMGTIIREEESNKVIVDLSKKGQEFVLVRGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++T QAP+YA PG+ G+E I L+LKL+AD+G++G PN GKST L+ T+A Sbjct: 122 GGKGNTKFATATRQAPHYAEPGMPGEELSIVLELKLLADVGLLGFPNVGKSTLLSMTTKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 PKIA+Y FTTL PNLG+V +G + F++ADIPGII+ A +G G+G +FLKH ERT +L+ Sbjct: 182 TPKIANYHFTTLKPNLGVVAIDGIEPFVMADIPGIIEGAAEGVGLGIQFLKHIERTRLLV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 HIV S +E + I +EL Y+ +L + +IV ++ D + D + + Sbjct: 242 HIVDISGIEGREPFEDFVKINEELKKYSVKLWDRPQIVVANKSDLLYDDEVFEEFERKVK 301 Query: 299 QCGQVP-FEFSSITGHGIPQILE 320 + G ++ S+ T G+ ++++ Sbjct: 302 ELGFAKVYKMSAATRDGVDEVIK 324 >gi|145632250|ref|ZP_01787985.1| GTP-binding protein [Haemophilus influenzae 3655] gi|144987157|gb|EDJ93687.1| GTP-binding protein [Haemophilus influenzae 3655] Length = 390 Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 153/340 (45%), Positives = 219/340 (64%), Gaps = 6/340 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE+ + I +GDGG G +SFRREKFI GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFIDESLIRIEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A+ GE G + +G +G+D++L VPVGT+ + D + DL + GQ++++A G Sbjct: 61 FNKRFAAERGENGRSSDCTGRRGKDIILPVPVGTRAIDNDTKETLGDLTEHGQKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLLLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDDSHSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V N I EL Y+ +L +K + ++IDT+ + + E+ Sbjct: 241 LIHLVDIAPIDGSNPADNVAIIESELFQYSEKLSEKPRWLVFNKIDTMSDEEAEERAREI 300 Query: 297 ATQCG--QVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 A Q G + + S+ TG + + + D I + E E Sbjct: 301 AEQLGWEEDYYFISAATGKNVSPLCRDIMDFIIANPREAE 340 >gi|317128196|ref|YP_004094478.1| GTP-binding protein Obg/CgtA [Bacillus cellulosilyticus DSM 2522] gi|315473144|gb|ADU29747.1| GTP-binding protein Obg/CgtA [Bacillus cellulosilyticus DSM 2522] Length = 427 Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 142/328 (43%), Positives = 215/328 (65%), Gaps = 5/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK+I GGP GG GG+G DV + L TL+DFRYQ Sbjct: 2 FVDKVKIYVKGGDGGNGMVAYRREKYIPDGGPAGGDGGKGADVVFEVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE G +N+ G +D+V+ VP GT + +E+ +I DL + GQR ++A GG Sbjct: 62 KHFKADRGENGRPKNQHGKSRDDMVVKVPPGTTIIDEETEKIIADLTEHGQRAVIAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F S +N AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFASPSNPAPEIAENGQPGQERNLVLELKVLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADY FTTL PNLG+V+ + + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIADYHFTTLTPNLGVVETDDQRSFVMADLPGLIEGAHSGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ S LE + Y I +EL YN L ++ +IV +++D S+ + E Sbjct: 242 HVIDMSGLEGRDPYEDYVTINEELEQYNMRLTERPQIVVANKMDLPTSEENLQAFREKVE 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ F S++T G+ +L + DK+ Sbjct: 302 DSVEI-FPISAVTKKGLNPLLRSIVDKV 328 >gi|194017058|ref|ZP_03055670.1| Spo0B-associated GTP-binding protein [Bacillus pumilus ATCC 7061] gi|194010926|gb|EDW20496.1| Spo0B-associated GTP-binding protein [Bacillus pumilus ATCC 7061] Length = 428 Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 143/322 (44%), Positives = 214/322 (66%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KVY++ GDGG G ++FRREK++ GGP GG GG G DV + L TL+DFRY+ Sbjct: 2 FVDQVKVYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGNGADVVFEVDEGLRTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM +N+ G E++V+ VP GT V + + ++ DL + GQR ++A GG Sbjct: 62 RHFKADRGEHGMSKNQHGRNAEEMVVKVPPGTVVTDAETEQVLADLTEHGQRAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP + G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATPANPAPQLSENGEPGKERDVILELKVLADVGLVGFPSVGKSTLLSIVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+V+ + + F++AD+PG+I+ AH+G G+G +FL+H ERT V++ Sbjct: 182 KPKIADYHFTTLVPNLGVVETDDNRSFVMADLPGLIEGAHEGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 H++ SALE + Y I +EL YN L ++ +I+ +++D D +D LA K +L Sbjct: 242 HVIDMSALEGRDPYEDYVTINEELEQYNMRLTERPQIIVANKMDMPDAADNLAAFKEKLT 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 P S+IT G+ ++L Sbjct: 302 DDYKVFP--ISAITREGLRELL 321 >gi|50119641|ref|YP_048808.1| GTPase ObgE [Pectobacterium atrosepticum SCRI1043] gi|81827233|sp|Q6D9C3|OBG_ERWCT RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|49610167|emb|CAG73607.1| putative GTP-binding protein [Pectobacterium atrosepticum SCRI1043] Length = 390 Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 142/305 (46%), Positives = 209/305 (68%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + I +GDGG G ISFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEATILIVAGDGGNGCISFRREKYIPNGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+D+ + VPVGT+V ++ ++ D+ + Q +++ G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDITIKVPVGTRVLDQGTGEVLGDMTRHQQSLMVGKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN+ FKSS N+AP G G+E+ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNSRFKSSVNRAPRQKTNGTKGEERELTLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEQSFVVADIPGLIEGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V E N + I++EL Y + L +K + +++D +D ++ E+ Sbjct: 241 LLHLVDLAPIDESNPIENAKVIINELEQYGAGLAEKPRWLVFNKVDLIDKAEAEKRAKEI 300 Query: 297 ATQCG 301 A G Sbjct: 301 AAALG 305 >gi|238757563|ref|ZP_04618748.1| Uncharacterized GTP-binding protein yhbZ [Yersinia aldovae ATCC 35236] gi|238704325|gb|EEP96857.1| Uncharacterized GTP-binding protein yhbZ [Yersinia aldovae ATCC 35236] Length = 390 Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 139/305 (45%), Positives = 208/305 (68%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGD+++ A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDIYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F+A+ G+ G R+ +G +G+D+ + VPVGT+V ++ ++ D+ + GQR+++A G Sbjct: 61 FVKSFRAERGQNGQSRDCTGKRGQDITIKVPVGTRVLDQGTGEIVGDMTRHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKTMGTDGETRELMLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ +++ F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVRMDHEQSFVVADIPGLIEGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V E + + I++EL Y+ L +K + ++ID + + + + Sbjct: 241 LLHLVDLAPIDESDPVENAKIIINELQQYSENLAQKPRWLVFNKIDIIGPEEAEIRAKAI 300 Query: 297 ATQCG 301 A G Sbjct: 301 AEALG 305 >gi|260581705|ref|ZP_05849502.1| obg family GTPase CgtA [Haemophilus influenzae NT127] gi|260095298|gb|EEW79189.1| obg family GTPase CgtA [Haemophilus influenzae NT127] Length = 390 Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 153/340 (45%), Positives = 218/340 (64%), Gaps = 6/340 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE+ + I +GDGG G +SFRREKFI GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFIDESLIRIEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A+ GE G + +G +G+D++L VPVGT+ + D + DL Q GQ++++A G Sbjct: 61 FNKRFAAERGENGRSSDCTGRRGKDIILPVPVGTRAIDNDTKETLGDLTQHGQKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++G PNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLLLELMLLADVGMLGFPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDDSHSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V N I EL Y+ +L +K + ++IDT+ + + E+ Sbjct: 241 LIHLVDIAPIDGSNPADNVAIIESELFQYSEKLSEKPRWLVFNKIDTMSDEEAEERAREI 300 Query: 297 ATQCG--QVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 A Q G + + S+ TG + + + D I + E E Sbjct: 301 AEQLGWEEDYYFISAATGKNVSPLCRDIMDFIIANPREAE 340 >gi|328947778|ref|YP_004365115.1| GTPase obg [Treponema succinifaciens DSM 2489] gi|328448102|gb|AEB13818.1| GTPase obg [Treponema succinifaciens DSM 2489] Length = 373 Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 145/285 (50%), Positives = 189/285 (66%), Gaps = 3/285 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 ++F DEA + +RSG GG G +SFRREK+I GGP+GG GGRGGDV NL TL R Sbjct: 2 IQFADEAVITVRSGKGGNGCVSFRREKYIPNGGPNGGDGGRGGDVIFCLKRNLRTLAHLR 61 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICD--LDQEGQRIILA 118 Y KA++G G NR G G+DVV+ VP GT + + + LI D ++ E + + Sbjct: 62 YHPILKAKNGGDGQGWNRYGKDGDDVVIPVPPGTTIRDNETGELIHDFTVESEDDQFVFL 121 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GGNGG+GN HFKSSTNQAP AN G GQE+++ ++L ++ADIG++G PNAGKS+ L Sbjct: 122 KGGNGGWGNVHFKSSTNQAPRIANKGAPGQERVLRVELSVMADIGLVGFPNAGKSSLLDF 181 Query: 179 VTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 T A+PKIA YPFTT PNLG++ G K+FI+ADIPGII+ A +GAG+G RFLKH RT Sbjct: 182 FTNARPKIAPYPFTTKIPNLGVLHAGDDKDFIIADIPGIIEGASEGAGLGIRFLKHISRT 241 Query: 238 HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 LL ++ +EN AY +L EL + EL KK IV ++ID Sbjct: 242 AGLLFMIDCSDENFLEAYDLLLKELDGFGRELTKKPRIVLCNKID 286 >gi|226329698|ref|ZP_03805216.1| hypothetical protein PROPEN_03610 [Proteus penneri ATCC 35198] gi|225202884|gb|EEG85238.1| hypothetical protein PROPEN_03610 [Proteus penneri ATCC 35198] Length = 272 Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 129/245 (52%), Positives = 183/245 (74%), Gaps = 1/245 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ I +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 9 MKFVDEAKILIVAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDVYMIADENLNTLIDYR 68 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + ++A+ GE G R+ +G +G+D+ ++VPVGT+V + +I DL GQ+ ++A G Sbjct: 69 FTKSYRAERGENGHSRDCTGKRGQDITISVPVGTRVRDLATNEIIADLTVHGQKQMVAKG 128 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 129 GFHGLGNTRFKSSVNRAPRQRTMGTPGESREVLLELMLLADVGMLGMPNAGKSTFIRAVS 188 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + ++ F++ADIPG+I+ A GAG+G +FLKH ER V Sbjct: 189 AAKPKVADYPFTTLVPSLGVVRMDNHQSFVVADIPGLIEGAADGAGLGIQFLKHLERCRV 248 Query: 240 LLHIV 244 LLH++ Sbjct: 249 LLHLI 253 >gi|253991514|ref|YP_003042870.1| GTPase ObgE [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638392|emb|CAR67014.1| similar to hypothetical gtp-binding protein yhbz of escherichia coli [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782964|emb|CAQ86129.1| similar to hypothetical gtp-binding protein yhbz of escherichia coli [Photorhabdus asymbiotica] Length = 391 Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 137/305 (44%), Positives = 211/305 (69%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEARILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+D+ + VPVGT+V + ++ D+ + QR+++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGQDITIKVPVGTRVRDVVTGEVLGDMTRHEQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQRTMGTSGETRELMLELMLLADVGMLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEQSFVVADIPGLIEGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ E + + I +EL Y+ +L +K + +++D ++ + ++ ++ Sbjct: 241 LLHLIDICPVDESDPVENARIIFNELQQYSEKLAQKPRWLVFNKVDLLEPEEAKQRVQDI 300 Query: 297 ATQCG 301 A + G Sbjct: 301 ADKLG 305 >gi|165975498|ref|YP_001651091.1| GTPase ObgE [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149309|ref|YP_001967834.1| GTP-binding protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250519|ref|ZP_07336716.1| GTPase ObgE [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303251863|ref|ZP_07338034.1| GTPase ObgE [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307244841|ref|ZP_07526940.1| GTPase obg [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307247016|ref|ZP_07529070.1| GTPase obg [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249239|ref|ZP_07531236.1| GTPase obg [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307251561|ref|ZP_07533468.1| GTPase obg [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253795|ref|ZP_07535649.1| GTPase obg [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307256061|ref|ZP_07537849.1| GTPase obg [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307258251|ref|ZP_07539994.1| GTPase obg [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260492|ref|ZP_07542186.1| GTPase obg [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307262622|ref|ZP_07544252.1| GTPase obg [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|261266632|sp|B3GZN0|OBG_ACTP7 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266633|sp|B0BRJ9|OBG_ACTPJ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|165875599|gb|ABY68647.1| GTP-binding protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189914440|gb|ACE60692.1| hypothetical GTP-binding protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302649293|gb|EFL79478.1| GTPase ObgE [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650507|gb|EFL80666.1| GTPase ObgE [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306854286|gb|EFM86492.1| GTPase obg [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306856468|gb|EFM88617.1| GTPase obg [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858763|gb|EFM90822.1| GTPase obg [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306861025|gb|EFM93031.1| GTPase obg [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306863279|gb|EFM95219.1| GTPase obg [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865483|gb|EFM97378.1| GTPase obg [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306867711|gb|EFM99556.1| GTPase obg [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869804|gb|EFN01587.1| GTPase obg [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306872045|gb|EFN03759.1| GTPase obg [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 391 Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 147/332 (44%), Positives = 213/332 (64%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRVEAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ + A GE G +G +G D+ L VPVGT+ + D +I DL + G ++++A G Sbjct: 61 FEKRYAAGRGENGRSAGCTGHRGNDITLRVPVGTRAIDNDTQEVIGDLTKHGMKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTNGTPGEKRDLLLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+ + G + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVARVGADRSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V + E + I EL Y+ +L +K + ++IDT+ + + E+ Sbjct: 241 LIHLVDIMPIDESDPAQNISVIESELYQYSEKLSEKPTWLVFNKIDTIGEEEAQARAQEI 300 Query: 297 ATQCGQVP--FEFSSITGHGIPQILECLHDKI 326 A Q G + S+ TG + + + D I Sbjct: 301 AEQIGWEGDYYLISAATGQNVQNLTRDIMDFI 332 >gi|154482898|ref|ZP_02025346.1| hypothetical protein EUBVEN_00595 [Eubacterium ventriosum ATCC 27560] gi|149736182|gb|EDM52068.1| hypothetical protein EUBVEN_00595 [Eubacterium ventriosum ATCC 27560] Length = 427 Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 141/324 (43%), Positives = 210/324 (64%), Gaps = 9/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+YI+SG GG G +SFRRE ++ GGP+GG GG+GGD+ Q LNTL +FR+ Sbjct: 2 FADFAKIYIKSGKGGDGHVSFRRELYVPNGGPNGGDGGKGGDIIFQVDKGLNTLYEFRHN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++KA+ G++G K+N++G GED+++ VP GT + E + ++ D+ + QR ++ GG Sbjct: 62 HNYKAEPGQEGGKQNKTGKNGEDLIIKVPEGTIIREAETGKIVADMSGDNQRAVVLKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+ ++T Q P YA PG E + L+LK IAD+G++G PN GKST L+ VT A Sbjct: 122 GGKGNQHYATATMQVPKYAQPGQKAMELNVTLELKSIADVGLVGFPNVGKSTLLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 PKIA+Y FTTL PNLG+V +G K F++ADIPG+I+ A +G G+G +FLKH ERT V++ Sbjct: 182 DPKIANYHFTTLNPNLGVVDLDGGKGFVIADIPGLIEGASEGVGLGHKFLKHIERTKVII 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT---LARKKNE 295 H++ A + A + I EL AYN +L K+ +++ ++ID + DT + K E Sbjct: 242 HMIDAASVEGRDPIADIKAINKELEAYNPDLLKRPQVIAANKIDAIYGDTNEVIDGIKKE 301 Query: 296 LATQCGQVPFEFSSITGHGIPQIL 319 P S+++G G+ ++L Sbjct: 302 FEPDIKVFP--ISAVSGKGLKELL 323 >gi|53729103|ref|ZP_00134062.2| COG0536: Predicted GTPase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207528|ref|YP_001052753.1| GTPase ObgE [Actinobacillus pleuropneumoniae L20] gi|261266631|sp|A3MYB2|OBG_ACTP2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|126096320|gb|ABN73148.1| hypothetical GTP-binding protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 391 Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 147/332 (44%), Positives = 213/332 (64%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRVEAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ + A GE G +G +G D+ L VPVGT+ + D +I DL + G ++++A G Sbjct: 61 FEKRYAAGRGENGRSAGCTGHRGNDITLRVPVGTRAIDNDTQEVIGDLTKHGMKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTNGTPGEKRDLLLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+ + G + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVARVGADRSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V + E + I EL Y+ +L +K + ++IDT+ + + E+ Sbjct: 241 LIHLVDIMPIDESDPAQNISVIESELYQYSEKLSEKPTWLVFNKIDTIGEEEAQARAQEI 300 Query: 297 ATQCGQVP--FEFSSITGHGIPQILECLHDKI 326 A Q G + S+ TG + + + D I Sbjct: 301 AEQIGWEGDYYLISAATGQNVQNLTRDIMDFI 332 >gi|220907462|ref|YP_002482773.1| GTPase ObgE [Cyanothece sp. PCC 7425] gi|261266812|sp|B8HU67|OBG_CYAP4 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|219864073|gb|ACL44412.1| GTP-binding protein Obg/CgtA [Cyanothece sp. PCC 7425] Length = 359 Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 142/320 (44%), Positives = 212/320 (66%), Gaps = 1/320 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ +R+G GG G ++FRREK++ GGP GG+GG GG V ++ L TL+DF Sbjct: 1 MQFIDQAEIQVRAGKGGDGIVAFRREKYVPAGGPAGGNGGPGGSVILRVNPQLQTLLDFH 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y Q FKA+ G++G +N +GA G D ++ VP GT V++ + +L+ DL Q +++A G Sbjct: 61 YTQLFKAEDGQRGGPKNMTGAAGNDRIIEVPAGTMVYDTETGALLGDLTDANQTLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F S+ N+AP YA PG+ G+E+ + L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GKGGLGNKFFLSNHNRAPDYALPGLEGEERSLRLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ + + ADIPG+I AHQG G+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRPPNGDGVVFADIPGLIAGAHQGIGLGHDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H++ + E+ Y I EL AY L + +IV L++ID + + L + L ++ Sbjct: 241 LIHLIDSTAEDPLRDYVTIQTELEAYGHGLSDRPQIVVLNKIDALLPEDLTDLQARLQSE 300 Query: 300 CGQVPFEFSSITGHGIPQIL 319 F S+I G+ +L Sbjct: 301 IHTPVFAISAIARTGLDALL 320 >gi|157368723|ref|YP_001476712.1| GTPase ObgE [Serratia proteamaculans 568] gi|261263076|sp|A8G8Z4|OBG_SERP5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|157320487|gb|ABV39584.1| GTP-binding protein Obg/CgtA [Serratia proteamaculans 568] Length = 390 Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 138/288 (47%), Positives = 204/288 (70%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEAAILVVAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+D+ + VPVGT+V ++ ++ D+ + QR+++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDITIKVPVGTRVQDQGTGEILGDMTRHEQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + I L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTLGTAGEARDILLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ +++ F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDHEQSFVVADIPGLIEGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH+V E + + I++EL+ Y+ L +K + ++ID + Sbjct: 241 LLHLVDIAPIDESDPVENAKVIINELNQYSENLSQKPRWLVFNKIDVI 288 >gi|210612753|ref|ZP_03289468.1| hypothetical protein CLONEX_01670 [Clostridium nexile DSM 1787] gi|210151446|gb|EEA82454.1| hypothetical protein CLONEX_01670 [Clostridium nexile DSM 1787] Length = 427 Score = 244 bits (624), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 153/332 (46%), Positives = 216/332 (65%), Gaps = 10/332 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+YIRSG GG G +SFRRE ++ GGPDGG GGRGGDV + LNTL D+R++ Sbjct: 2 FADRAKIYIRSGKGGDGHVSFRRELYVPNGGPDGGDGGRGGDVIFEVDEGLNTLADYRHK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A+ GE+G KR G ED++L VP GT V E + +I D+ E +R ++ GG Sbjct: 62 RKFAAKDGEQGGKRRCHGKDAEDIILKVPEGTVVKEAESGKVIADMSGENRRQVILKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST Q P YA PG QE + L+LK+IAD+G++G PN GKSTFL+ VT A Sbjct: 122 GGLGNQHFATSTMQIPKYAQPGQPAQELNVQLELKVIADVGLVGFPNVGKSTFLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 PKIA+Y FTTL PNLG+V G E F++ADIPG+I+ A +G G+G FL+H ERT +++ Sbjct: 182 NPKIANYHFTTLNPNLGVVDLGDGESFVIADIPGLIEGASEGVGLGHEFLRHIERTKMMI 241 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKN 294 H+V A + V Y+ I +EL AYN E+ K+ +++ ++ D + D D + R + Sbjct: 242 HVVDAASSEGRDPVDDIYK-INEELEAYNPEIAKRPQVIAANKTDLIYSEDEDPVERIRA 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E + +V F S ++G GI ++L ++D++ Sbjct: 301 EFEPKGVKV-FAISGVSGAGIKELLHYVNDQL 331 >gi|269215930|ref|ZP_06159784.1| Obg family GTPase CgtA [Slackia exigua ATCC 700122] gi|269130189|gb|EEZ61267.1| Obg family GTPase CgtA [Slackia exigua ATCC 700122] Length = 464 Score = 244 bits (624), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 147/353 (41%), Positives = 216/353 (61%), Gaps = 26/353 (7%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+ +Y+R GDGGAG +SFRRE + GGPDGG GG GG+V +QA + L++LI +RY+ Sbjct: 2 FTDKVHIYVRGGDGGAGCMSFRREAHVPKGGPDGGDGGHGGNVVVQADAALSSLIQYRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGIS-----LICDLDQEGQRIIL 117 HFKA+ G G GA+G+D++L VP+GT V E + S LI DL +G+R+ + Sbjct: 62 HHFKAERGTHGKGSRMHGARGDDLILKVPLGTIVREWNDDSKETGALIADLTHDGERVTV 121 Query: 118 APGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 A GG GG GN HF +ST +AP +A G E I L++KL+AD ++G+P+ GKS+ +A Sbjct: 122 ANGGMGGRGNIHFVTSTRRAPSFAELGEPASESWIELEMKLMADAALVGMPSVGKSSLIA 181 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 ++ A+PKIADYPFTTL PNLG+VK +F++AD+PG+I+ A +G G+G FL+H ERT Sbjct: 182 RISAARPKIADYPFTTLVPNLGVVKGDEYDFVVADVPGLIEGASEGRGLGHEFLRHIERT 241 Query: 238 HVLLHIVSAL-----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT--------- 283 +++H+V + V+ Y+ I EL Y S+L + IV ++ D Sbjct: 242 ALIVHVVDMTGGYEGRDPVE-DYRIINRELEMYASDLASRPRIVVANKCDAPGVEDAVRR 300 Query: 284 ----VDSDTLARKK-NELATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 V SD +A NE A + + S++TG GI ++ L +K+ +R Sbjct: 301 LEAEVRSDAVAAADGNEYADSVAEAKVYRISALTGEGIDPLVHALGEKVHELR 353 >gi|157693193|ref|YP_001487655.1| GTPase ObgE [Bacillus pumilus SAFR-032] gi|261266746|sp|A8FFS8|OBG_BACP2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|157681951|gb|ABV63095.1| spo0B-associated GTP-binding protein [Bacillus pumilus SAFR-032] Length = 428 Score = 244 bits (624), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 142/322 (44%), Positives = 214/322 (66%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KVY++ GDGG G ++FRREK++ GGP GG GG G DV + L TL+DFRY+ Sbjct: 2 FVDQVKVYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGNGADVVFEVDEGLRTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM +N+ G E++++ VP GT V + + ++ DL + GQR ++A GG Sbjct: 62 RHFKADRGEHGMSKNQHGRNAEEMIVKVPPGTVVTDAETEQVLADLTEHGQRAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP + G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATPANPAPQLSENGEPGKERDVILELKVLADVGLVGFPSVGKSTLLSIVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+V+ + + F++AD+PG+I+ AH+G G+G +FL+H ERT V++ Sbjct: 182 KPKIADYHFTTLVPNLGVVETDDNRSFVMADLPGLIEGAHEGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 H++ SALE + Y I +EL YN L ++ +I+ +++D D +D LA K +L Sbjct: 242 HVIDMSALEGRDPYEDYVTINEELEQYNMRLTERPQIIVANKMDMPDAADNLAAFKEKLT 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 P S+IT G+ ++L Sbjct: 302 DDYKVFP--ISAITREGLRELL 321 >gi|322513914|ref|ZP_08066991.1| Spo0B-associated GTP-binding protein [Actinobacillus ureae ATCC 25976] gi|322120249|gb|EFX92202.1| Spo0B-associated GTP-binding protein [Actinobacillus ureae ATCC 25976] Length = 391 Score = 244 bits (624), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 147/332 (44%), Positives = 213/332 (64%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRVEAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ + A GE G +G +G D+ L VPVGT+ + D +I DL + G ++++A G Sbjct: 61 FEKRYAAGRGENGRSAGCTGHRGNDITLRVPVGTRAIDNDTQEVIGDLTKHGMKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTNGTPGEKRDLLLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+ + G + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVARVGADRSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V + E + I EL Y+ +L +K + ++IDT+ + + E+ Sbjct: 241 LIHLVDIMPIDESDPAQNISVIESELYQYSEKLSEKPTWLVFNKIDTIGEEEAQARAQEI 300 Query: 297 ATQCGQV--PFEFSSITGHGIPQILECLHDKI 326 A Q G + S+ TG + + + D I Sbjct: 301 AEQIGWEGDYYLISAATGQNVQNLTRDIMDFI 332 >gi|167758148|ref|ZP_02430275.1| hypothetical protein CLOSCI_00486 [Clostridium scindens ATCC 35704] gi|167664045|gb|EDS08175.1| hypothetical protein CLOSCI_00486 [Clostridium scindens ATCC 35704] Length = 427 Score = 244 bits (624), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 146/332 (43%), Positives = 213/332 (64%), Gaps = 10/332 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK++I+SG GG G +SFRRE ++ GGPDGG GGRGGDV + LNTL D+R++ Sbjct: 2 FADRAKIFIKSGKGGDGHVSFRRELYVPNGGPDGGDGGRGGDVIFEVDEGLNTLQDYRHR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ GE+G KR G ED+VL VP GT + E + +I D+ + +R ++ GG Sbjct: 62 KKYAAKDGEQGGKRRCHGKDAEDIVLKVPEGTVIKESESGKVIADMSGDNRRQVILKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST Q P YA PG QE + L+LK+IAD+G++G PN GKST L+ VT A Sbjct: 122 GGLGNQHFATSTMQIPKYAQPGQPSQELWVNLELKVIADVGLVGFPNVGKSTLLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 PKIA+Y FTTL PNLG+V + F++ADIPG+I+ A +G G+G FL+H ERT +++ Sbjct: 182 DPKIANYHFTTLNPNLGVVDLPDGRGFVMADIPGLIEGASEGVGLGHEFLRHIERTKLMI 241 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKN 294 H+V A + V Y+ I EL AYN ++ K+ +++ +++D + D + R K+ Sbjct: 242 HVVDAAGTEGRDPVDDIYK-INAELEAYNPDIAKRPQVIAANKVDVIYPEGEDPIQRLKD 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E + +V F S +TG GI ++L + D++ Sbjct: 301 EFEPKGIRV-FPISGVTGAGIKELLYYVSDRL 331 >gi|261820116|ref|YP_003258222.1| GTPase ObgE [Pectobacterium wasabiae WPP163] gi|261604129|gb|ACX86615.1| GTP-binding protein Obg/CgtA [Pectobacterium wasabiae WPP163] Length = 390 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 140/305 (45%), Positives = 209/305 (68%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+D+ + VPVGT+V ++ ++ D+ + Q +++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDITIKVPVGTRVLDQGTGEVLGDMTRHQQNLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+E+ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTSGTKGEERELTLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEQSFVVADIPGLIEGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V E + + I++EL Y + L +K + +++D +D ++ E+ Sbjct: 241 LLHLVDLAPIDESDPIENAKIIINELEQYGAGLAEKPRWLVFNKVDLIDKTEAEKRAKEI 300 Query: 297 ATQCG 301 A G Sbjct: 301 AAALG 305 >gi|198274217|ref|ZP_03206749.1| hypothetical protein BACPLE_00357 [Bacteroides plebeius DSM 17135] gi|198272892|gb|EDY97161.1| hypothetical protein BACPLE_00357 [Bacteroides plebeius DSM 17135] Length = 394 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 146/323 (45%), Positives = 210/323 (65%), Gaps = 7/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + RREK++ GGPDGG GGRGG V ++ N TL+ +Y Sbjct: 6 FVDYVKIYCRSGKGGRGSVHMRREKYMPNGGPDGGDGGRGGHVILRGNRNYWTLLHLKYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G K G G D V+ VP GT V+ + +CD+ + GQ +IL GG Sbjct: 66 RHVFAEHGGNGSKNKSFGKDGADKVIEVPCGTVVYNAETGEYVCDVTEHGQEVILLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+++T QAP +A PG QE + L+LKL+AD+G++G PNAGKST L+SV+ A Sbjct: 126 GGLGNWHFRTATRQAPRFAQPGEPMQEMTVILELKLLADVGLVGFPNAGKSTLLSSVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PKIA+YPFTTL PNLGIV EG K F++ADIPGII+ A +G G+G RFL+H ER +L Sbjct: 186 RPKIANYPFTTLEPNLGIVSYHEG-KSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLL 244 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L +V ++++ Y+ +L+EL+ +N E+ K ++ +++ D +D + + + L Sbjct: 245 LFMVPGDTDDIRKEYEILLNELATFNPEMLDKQRVLAITKCDMLDEELMQMLEPTLPE-- 302 Query: 301 GQVPFEF-SSITGHGIPQILECL 322 +P F SS++G GI Q+ + L Sbjct: 303 -DIPHVFISSVSGMGIQQLKDLL 324 >gi|160871683|ref|ZP_02061815.1| GTP-binding protein Obg/CgtA [Rickettsiella grylli] gi|159120482|gb|EDP45820.1| GTP-binding protein Obg/CgtA [Rickettsiella grylli] Length = 338 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 147/306 (48%), Positives = 204/306 (66%), Gaps = 4/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDE ++ + +G GGAG +SFRREKFI FGGPDGG GG GG V+++A+ NLNTLIDF Sbjct: 1 MKFLDEVEIRVEAGKGGAGCVSFRREKFIPFGGPDGGDGGDGGGVYLKASVNLNTLIDFH 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + +KA HGE G + +G KG D+VL VPVGT++ + D LI DL Q +A G Sbjct: 61 CHRLYKAGHGEPGKGNDSAGKKGADLVLEVPVGTEIADADTQELIGDLTAPNQIQCVARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSSTN++P G LG+ + + L LKL+AD+G++GLPNAGKS+ + +V+ Sbjct: 121 GWHGLGNARFKSSTNRSPRQFTTGYLGEARRLKLSLKLLADVGLVGLPNAGKSSLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTT+ P+LG+V+ E F++AD+PG++ A +G G+G RFLKH RT + Sbjct: 181 AATPKVADYPFTTVQPHLGVVRLEAGCSFVMADVPGLMTGASEGFGLGIRFLKHLSRTRL 240 Query: 240 LLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHIV + Q I +EL Y+ EL +K + L++ID + ++ L + + Sbjct: 241 LLHIVDVKPVDGSDPLQNIALIENELEKYSPELAQKPRWLVLNKIDLLSAEELEQCVQRI 300 Query: 297 ATQCGQ 302 ATQ + Sbjct: 301 ATQISE 306 >gi|227903829|ref|ZP_04021634.1| GTPase ObgE [Lactobacillus acidophilus ATCC 4796] gi|227868716|gb|EEJ76137.1| GTPase ObgE [Lactobacillus acidophilus ATCC 4796] Length = 433 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 142/324 (43%), Positives = 215/324 (66%), Gaps = 8/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EK++ GGP GG GGRGG + A S L TL+DFRY+ Sbjct: 4 FVDQTKIEVQAGKGGDGMVAFRHEKYVPNGGPAGGDGGRGGSIIFVADSGLRTLMDFRYR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A +GE G +++ G +D+ L VPVGT V++ + LI DL ++GQ +++A GG Sbjct: 64 RKFNADNGENGRIKSQYGRGAKDLYLKVPVGTTVYDFNTGELIGDLVEKGQELVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +S N AP A G G+++++ L+LKL+AD+G++G P+ GKST L+ T+A Sbjct: 124 GGRGNIHFATSVNTAPEIAENGEPGEDRVLRLELKLLADVGLVGFPSVGKSTLLSVTTKA 183 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+I+ A QG G+G +FL+H ERT V+ Sbjct: 184 KPKIAAYQFTTLTPNLGMVILPDG-RDFSMADLPGLIEGASQGVGLGIQFLRHVERTKVI 242 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKKNEL 296 LH+VS N + A Y I EL +Y ++L K E++ SQ+D +D LA+ + +L Sbjct: 243 LHLVSMDPNNGREAIEDYHTIRQELKSYATDLSDKRELIVASQMDIPGADKKLAQFRKDL 302 Query: 297 ATQCGQVP-FEFSSITGHGIPQIL 319 + P + SS+T G+ +++ Sbjct: 303 EKESNDEPVYAISSVTHAGVSKLM 326 >gi|254491289|ref|ZP_05104470.1| GTP-binding protein Obg/CgtA [Methylophaga thiooxidans DMS010] gi|224463802|gb|EEF80070.1| GTP-binding protein Obg/CgtA [Methylophaga thiooxydans DMS010] Length = 352 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 144/292 (49%), Positives = 212/292 (72%), Gaps = 5/292 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ I +G GG G +SFRREKFI FGGPDGG GG GGDV++ A S +NTLIDFR Sbjct: 1 MKFVDEARIKISAGAGGNGCLSFRREKFIPFGGPDGGDGGDGGDVYLIADSQVNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ+++KA+ GE G R SGA+G D+V+ VP+GT+ +++D LI DL +EG ++++A G Sbjct: 61 YQRNYKAERGEHGRGRLCSGARGADLVIKVPIGTEAWDDDTDELIGDLTEEGTKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA +KSS N+AP + G G+E+ + L++KL+AD+G++GLPNAGKSTF++ V+ Sbjct: 121 GWHGLGNARYKSSVNRAPRQTSDGTPGEERHLRLEMKLLADVGLLGLPNAGKSTFISQVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+A+YPFTTLYPNLG+V + + F++AD+PG+++ A GAG+G +FL+H RT + Sbjct: 181 AAQPKVANYPFTTLYPNLGVVTLKDVRSFVIADVPGLVEGAADGAGLGIQFLRHLTRTRL 240 Query: 240 LLHIVSALEENVQ----AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V +V+ + + I EL Y+ L + + + L+++D V D Sbjct: 241 LLHLVDMAPADVKQDPVESVKTINRELENYSEALGSQEQWLVLNKMDLVPDD 292 >gi|253577867|ref|ZP_04855139.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850185|gb|EES78143.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 434 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 145/326 (44%), Positives = 211/326 (64%), Gaps = 11/326 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+YIRSG GG G +SFRRE ++ GGPDGG GGRGGDV + NTL D+R++ Sbjct: 5 FADRAKIYIRSGKGGDGHVSFRRELYVPNGGPDGGDGGRGGDVIFEVDEGQNTLGDYRHR 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA+ G++G K+ GA G+DVVL VP GT + + + +I D+ E +R I+ GG Sbjct: 65 RKYKAEDGQEGGKKRCHGADGKDVVLKVPEGTVIMDAESGKVIADMSGENKRQIVLRGGR 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+ ++T Q P YA PG QE + L+LK+IAD+G++G PN GKSTFL+ VT A Sbjct: 125 GGKGNQHYATATMQVPKYAQPGQPAQELEVLLELKVIADVGLVGFPNVGKSTFLSRVTNA 184 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIA+Y FTTL PNLG+V F++ADIPG+I+ A +G G+G FL+H ERT V++H Sbjct: 185 QPKIANYHFTTLSPNLGVVDTENGGFVIADIPGLIEGASEGVGLGHEFLRHIERTRVIIH 244 Query: 243 IVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-----DSDTLARKK 293 IV A + + Y+ I EL AYN E+ + +++ ++ID + + + + K Sbjct: 245 IVDAASTEGRDPIDDIYK-INKELEAYNPEIAARPQVIAANKIDCIYTEDGEESPIDKLK 303 Query: 294 NELATQCGQVPFEFSSITGHGIPQIL 319 E + QV + S+++G G+ ++L Sbjct: 304 AEFEPKGIQV-YPISAVSGQGVRELL 328 >gi|28897104|ref|NP_796709.1| GTPase ObgE [Vibrio parahaemolyticus RIMD 2210633] gi|260878018|ref|ZP_05890373.1| Obg family GTPase CgtA [Vibrio parahaemolyticus AN-5034] gi|81839899|sp|Q87SU2|OBG_VIBPA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|28805313|dbj|BAC58593.1| GTP1/Obg family protein [Vibrio parahaemolyticus RIMD 2210633] gi|308089853|gb|EFO39548.1| Obg family GTPase CgtA [Vibrio parahaemolyticus AN-5034] gi|328471902|gb|EGF42779.1| GTPase CgtA [Vibrio parahaemolyticus 10329] Length = 390 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 152/331 (45%), Positives = 218/331 (65%), Gaps = 8/331 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA V +++GDGG+G +SF REKFI GGPDGG GG GGDV+IQA NLNTLID+R Sbjct: 1 MKFVDEAVVKVQAGDGGSGVVSFWREKFITKGGPDGGDGGDGGDVYIQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ GE G N +G +G+D+VL VPVGT+ + ++ ++ + G+++++A G Sbjct: 61 FQRFYEAERGENGRGGNCTGKRGKDIVLRVPVGTRAVDIHTNEIVAEVAEHGKKVMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + I L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQRTLGTKGEIREIRLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + + VQ A I+DEL Y+ +L K + +++D + + K E Sbjct: 241 LLHMIDIMPIDQSDPVQNAL-TIIDELEQYSEKLASKPRWLVFNKVDLMPEEEANEKIQE 299 Query: 296 LATQCGQVP--FEFSSITGHGIPQILECLHD 324 + G F+ S+I G ++ L D Sbjct: 300 ILDALGWEDEYFKISAINRSGTKELCYKLAD 330 >gi|259500675|ref|ZP_05743577.1| Spo0B-associated GTP-binding protein [Lactobacillus iners DSM 13335] gi|302191364|ref|ZP_07267618.1| GTPase ObgE [Lactobacillus iners AB-1] gi|259168059|gb|EEW52554.1| Spo0B-associated GTP-binding protein [Lactobacillus iners DSM 13335] Length = 427 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 146/337 (43%), Positives = 218/337 (64%), Gaps = 8/337 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G+GG G ++FR EK+ GGP GG GGRGG +++ A S L TL+DFR++ Sbjct: 2 FVDQTKIEVQAGNGGDGAVAFRHEKYAPLGGPAGGDGGRGGSIYLVADSGLRTLMDFRFR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA +GE G +++ G +DV L VP+GT V++ L+ DL GQ++ +A GG Sbjct: 62 RKFKADNGENGRIKSQYGRGAKDVFLKVPMGTAVYDFYTNELLGDLVGNGQKLRVACGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST AP A G G+ + + L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 122 GGRGNIHFATSTRTAPEIAENGEPGEFRTLRLELKVLADVGLVGFPSVGKSTLLSVVTKA 181 Query: 183 KPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG +V E ++F +AD+PG+IK A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIAAYEFTTLTPNLGMVVLEDGRDFSMADLPGLIKGASQGVGLGIQFLRHVERTKVIL 241 Query: 242 HIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++S N + AY+ I EL+ Y ++L KK EIV SQ+D S+ K EL Sbjct: 242 HLISMDPNNGRDAYEDYLTIRQELAGYTNDLTKKTEIVVASQMDIPGSE---EKLQELKK 298 Query: 299 QCG-QVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + ++ + SSIT G+ ++ D +++ + E Sbjct: 299 KLNDKIIYPISSITHKGVRDLMIKAADIVYAANDQVE 335 >gi|225010500|ref|ZP_03700971.1| GTP-binding protein Obg/CgtA [Flavobacteria bacterium MS024-3C] gi|225005329|gb|EEG43280.1| GTP-binding protein Obg/CgtA [Flavobacteria bacterium MS024-3C] Length = 342 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 151/329 (45%), Positives = 207/329 (62%), Gaps = 6/329 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D KV++ SG+GG G I REKFI GGPDGG GGRGG + ++ +L TL+ ++++ Sbjct: 6 FVDYVKVFLTSGNGGKGSIHLHREKFITKGGPDGGDGGRGGHIILKGNKHLWTLVHYKFK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HF A+HG G K G G DV L VP+GT V + + + ++ + Q I+L GG Sbjct: 66 KHFTAEHGGHGSKNRSFGTDGNDVYLEVPLGTVVKDGETQEPLYEVTEHDQEIVLLDGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+SSTNQ P YA PGI G+E L+LK++AD+G++G PNAGKST L+ +T A Sbjct: 126 GGLGNWHFRSSTNQTPRYAQPGIPGKEGSFTLELKVLADVGLVGFPNAGKSTLLSVITSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLGIV+ +K F++ADIPGII+ A +G G+G FL+H ER LL Sbjct: 186 KPKIASYAFTTLKPNLGIVEYRDFKSFVMADIPGIIEGAAEGKGLGHYFLRHIERNATLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A E++ Y +LDEL YN EL K +V +S+ D +D + A L G Sbjct: 246 FLIPADSEDIVKEYGVLLDELRRYNPELLDKDRLVAISKSDMLDEELEAEISGLLKPVLG 305 Query: 302 QVPFE-FSSITGHGI----PQILECLHDK 325 PF FS++ GI + E +HD+ Sbjct: 306 NTPFLFFSAVAQKGIMPLKDTLWEMIHDQ 334 >gi|291522340|emb|CBK80633.1| Obg family GTPase CgtA [Coprococcus catus GD/7] Length = 426 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 143/326 (43%), Positives = 209/326 (64%), Gaps = 11/326 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+ K+YIRSG GG G + FRRE F+ GGP+GG GG+GGDV LNTL DFR+ Sbjct: 2 FADQVKIYIRSGKGGDGHVGFRRELFVPAGGPNGGDGGKGGDVIFVVDEGLNTLSDFRHM 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A +GE G K GA GED+++ VP GT + + + +I D+ +R+ + GG Sbjct: 62 KKYCAPNGEDGGKNRCHGADGEDLIIKVPEGTVIRDAESGRVIADMSHGNKRVTVLKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+ ++T QAP YA PG E ++ L+LK+IAD+G++G PN GKSTFL+ VT A Sbjct: 122 GGKGNQHYATATMQAPKYAQPGQRAMELVVTLELKVIADVGLVGFPNVGKSTFLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V + F++ADIPGII+ A +G G+G FL+H ERT V++ Sbjct: 182 RPKIANYHFTTLNPNLGVVDLPDGRGFVIADIPGIIEGASEGVGLGFEFLRHIERTKVMI 241 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV----DSDTLARKK 293 HIV A + + Y+ I EL AYN E+ K+ +++ ++IDT+ + D + + Sbjct: 242 HIVDAASVEGRDPIDDIYK-INAELEAYNPEIAKRPQVIAANKIDTLYEGENDDAITLLR 300 Query: 294 NELATQCGQVPFEFSSITGHGIPQIL 319 E + +V F S+++G G+ ++L Sbjct: 301 EEFEPKGIKV-FPISAVSGKGVRELL 325 >gi|313157951|gb|EFR57357.1| Obg family GTPase CgtA [Alistipes sp. HGB5] Length = 337 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 152/333 (45%), Positives = 219/333 (65%), Gaps = 12/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K++ RSG GGAG FRREKF+ FGGPDGG GG+GG + +Q S TLI +YQ Sbjct: 6 FVDYVKIFARSGHGGAGSAHFRREKFVAFGGPDGGDGGKGGSIVLQGDSQYWTLIHLKYQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQ----VFEEDG---ISLICDLDQEGQRI 115 +H A+ G+ G SG +D+V+ VP+GT V +EDG + + ++ +G+R+ Sbjct: 66 RHQFAEDGQCGSGARSSGKDAKDIVIPVPLGTVAKRIVTQEDGTETVETVGEVTADGERL 125 Query: 116 ILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTF 175 +L GG GG GN HFKS+TNQ P YA PG G E L+LK++AD+G++G PNAGKST Sbjct: 126 VLLHGGRGGLGNWHFKSATNQTPRYAQPGEEGDEGAFILELKVLADVGLVGFPNAGKSTL 185 Query: 176 LASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 LA+V+ AKPKIA+Y FTTL PNLGIV+ +K F++ADIPGII+ AH+G G+G RFL+H Sbjct: 186 LAAVSAAKPKIANYAFTTLEPNLGIVEVRDHKSFVMADIPGIIEGAHEGRGLGTRFLRHI 245 Query: 235 ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 ER VLL ++ A ++V+ Y+ +L EL+ YN EL K ++ +++ D +D + + + K Sbjct: 246 ERNSVLLFMIPADSDDVRRDYEVLLGELTQYNPELLDKERLLAVTKCDMLDEELIEQMKP 305 Query: 295 ELATQCGQVPFEF-SSITGHGIPQILECLHDKI 326 L +P F SS++G I ++ + L + + Sbjct: 306 HLPE---GIPSVFISSVSGLNISRLKDMLWEAL 335 >gi|309805698|ref|ZP_07699738.1| Obg family GTPase CgtA [Lactobacillus iners LactinV 09V1-c] gi|309807098|ref|ZP_07701077.1| Obg family GTPase CgtA [Lactobacillus iners LactinV 03V1-b] gi|309807940|ref|ZP_07701868.1| Obg family GTPase CgtA [Lactobacillus iners LactinV 01V1-a] gi|309809265|ref|ZP_07703134.1| Obg family GTPase CgtA [Lactobacillus iners SPIN 2503V10-D] gi|312873944|ref|ZP_07733980.1| Obg family GTPase CgtA [Lactobacillus iners LEAF 2052A-d] gi|312875474|ref|ZP_07735477.1| Obg family GTPase CgtA [Lactobacillus iners LEAF 2053A-b] gi|325911985|ref|ZP_08174387.1| Obg family GTPase CgtA [Lactobacillus iners UPII 143-D] gi|325912875|ref|ZP_08175253.1| Obg family GTPase CgtA [Lactobacillus iners UPII 60-B] gi|308164951|gb|EFO67194.1| Obg family GTPase CgtA [Lactobacillus iners LactinV 09V1-c] gi|308166528|gb|EFO68728.1| Obg family GTPase CgtA [Lactobacillus iners LactinV 03V1-b] gi|308168791|gb|EFO70881.1| Obg family GTPase CgtA [Lactobacillus iners LactinV 01V1-a] gi|308170378|gb|EFO72402.1| Obg family GTPase CgtA [Lactobacillus iners SPIN 2503V10-D] gi|311088985|gb|EFQ47426.1| Obg family GTPase CgtA [Lactobacillus iners LEAF 2053A-b] gi|311090493|gb|EFQ48901.1| Obg family GTPase CgtA [Lactobacillus iners LEAF 2052A-d] gi|325476170|gb|EGC79334.1| Obg family GTPase CgtA [Lactobacillus iners UPII 143-D] gi|325477868|gb|EGC81002.1| Obg family GTPase CgtA [Lactobacillus iners UPII 60-B] Length = 427 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 145/337 (43%), Positives = 219/337 (64%), Gaps = 8/337 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G+GG G ++FR EK+ GGP GG GGRGG +++ A S L TL+DFR++ Sbjct: 2 FVDQTKIEVQAGNGGDGAVAFRHEKYAPLGGPAGGDGGRGGSIYLVADSGLRTLMDFRFR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++GE G +++ G +DV L VP+GT V++ L+ DL GQ++ +A GG Sbjct: 62 RKFKAENGENGRIKSQYGRGAKDVFLKVPMGTAVYDFYTNELLGDLVGNGQKLRVACGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST AP A G G+ + + L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 122 GGRGNIHFATSTRTAPEIAENGEPGEFRTLRLELKVLADVGLVGFPSVGKSTLLSVVTKA 181 Query: 183 KPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG +V + ++F +AD+PG+IK A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIAAYEFTTLTPNLGMVVLDDGRDFSMADLPGLIKGASQGVGLGIQFLRHVERTKVIL 241 Query: 242 HIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++S N + AY+ I EL+ Y ++L KK EIV SQ+D S+ K EL Sbjct: 242 HLISMDPNNGRDAYEDYLTIRQELAGYTNDLTKKTEIVVASQMDIPGSE---EKLQELKK 298 Query: 299 QCG-QVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + ++ + SSIT G+ ++ D +++ + E Sbjct: 299 KLNDKIIYPISSITHKGVRDLMIKAADIVYAANDQAE 335 >gi|289578068|ref|YP_003476695.1| GTP-binding protein Obg/CgtA [Thermoanaerobacter italicus Ab9] gi|297544341|ref|YP_003676643.1| GTP-binding protein Obg/CgtA [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289527781|gb|ADD02133.1| GTP-binding protein Obg/CgtA [Thermoanaerobacter italicus Ab9] gi|296842116|gb|ADH60632.1| GTP-binding protein Obg/CgtA [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 423 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 150/322 (46%), Positives = 219/322 (68%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A++YI++GDGG G ISFRREK++ +GGPDGG GG+GGDV A NL+TL+DF+Y+ Sbjct: 2 FIDTARIYIKAGDGGNGVISFRREKYVAYGGPDGGDGGKGGDVIFIADPNLSTLLDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + AQ+GE G +N+ G GED+ + VPVGT + ++ +I DL + Q+ I+ GG Sbjct: 62 KRYIAQNGENGRGKNQYGKNGEDLYIKVPVGTLIINDETGEIIADLVKPNQKAIVLRGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F +ST + P +A G G+E + L+LKL+AD+G+IG PNAGKST LAS TRA Sbjct: 122 GGRGNAKFATSTLKTPRFAESGEKGKEMWVRLELKLLADVGLIGFPNAGKSTLLASCTRA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIA+YPFTTL PNLG+V+ K F++ADIPG+I+ AH+G G+G FL+H ERT +L+H Sbjct: 182 RPKIANYPFTTLTPNLGVVEYKGKSFVMADIPGLIEGAHRGEGLGHDFLRHIERTKMLIH 241 Query: 243 I--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELAT 298 + VSA E + ++ I +EL Y+ L +IV ++ID + + E+ Sbjct: 242 VVDVSASEGRDPIEDFEKINEELKLYSERLLTLPQIVAANKIDIQSGKENYPAFEKEIKK 301 Query: 299 QCGQVPFEFSSITGHGIPQILE 320 + +V + S++T GI ++L+ Sbjct: 302 RGYEV-YPISALTKEGIDKLLD 322 >gi|24213552|ref|NP_711033.1| GTPase ObgE [Leptospira interrogans serovar Lai str. 56601] gi|45658606|ref|YP_002692.1| GTPase ObgE [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|81830719|sp|Q72NQ7|OBG_LEPIC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|81846446|sp|Q8F7U0|OBG_LEPIN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|24194338|gb|AAN48051.1| GTPase ObgE [Leptospira interrogans serovar Lai str. 56601] gi|45601850|gb|AAS71329.1| GTP-binding protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 356 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 143/327 (43%), Positives = 207/327 (63%), Gaps = 3/327 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + + +G GGAG + FRREK++EFGGPDGG GG GG+V I+ ++ TL + + Sbjct: 4 FVDEVAIEVFAGHGGAGSVHFRREKYVEFGGPDGGDGGIGGNVVIRPNLSMYTLDKYLSK 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKAQ G G+ N SG KGED+VL VP+GTQ+++E+ L+ D + Q ++A GG Sbjct: 64 RKFKAQAGFPGVGDNCSGKKGEDLVLFVPLGTQIYDEETGDLLFDFVSDSQEFVVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFK+STNQ P +A PG G+ K + L LKL+AD+GI+GLPNAGKST ++ +T A Sbjct: 124 GGKGNAHFKTSTNQTPRFAQPGEEGEYKFLRLSLKLLADVGIVGLPNAGKSTLISKITDA 183 Query: 183 KPKIADYPFTTLYPNLGIVKE--GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 PKIA Y FTTL PNLG+VK F +ADIPGII+ A G G+G FL+H ER + Sbjct: 184 HPKIAGYAFTTLSPNLGVVKRRGDIFRFTIADIPGIIEGASMGIGLGLSFLRHIERVKGI 243 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L++ A +++ + + +ELS YN EL + ++ L++ID + + + Sbjct: 244 LYLFDASSLDIEEDLKMLRNELSTYNPELLNRPYLIVLNKIDIWNDPEFTKDVIAKVSHL 303 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIF 327 G+V S+ + ++LE + + F Sbjct: 304 GKV-VAISADQEVNLEELLENMDEVFF 329 >gi|78042851|ref|YP_359233.1| GTPase ObgE [Carboxydothermus hydrogenoformans Z-2901] gi|123576979|sp|Q3AF51|OBG_CARHZ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|77994966|gb|ABB13865.1| spo0B-associated GTP-binding protein [Carboxydothermus hydrogenoformans Z-2901] Length = 429 Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 153/336 (45%), Positives = 227/336 (67%), Gaps = 7/336 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+Y+++GDGG G +SFRREK++ GGPDGG GGRGG V + LNTL+DFRY+ Sbjct: 2 FYDTAKIYVKAGDGGNGCVSFRREKYVPNGGPDGGDGGRGGSVILVGDEGLNTLLDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KA GE G NR G GE++ + VPVGT V +E ++ D+ + GQ +++A GG Sbjct: 62 RHYKAPRGEHGKGSNRHGKAGENLYIRVPVGTVVKDEATGEILADITEHGQEVVVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHF S T+QAP +A G G+E+ + L+LKL+AD+G++G PNAGKST ++ V+ A Sbjct: 122 GGRGNAHFASPTHQAPKFAELGEPGEERWLLLELKLLADVGLVGYPNAGKSTLISRVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADYPFTTL PNLG+V+ G + F++ADIPG+I+ AH G G+G +FL+H ERT VLL Sbjct: 182 RPKIADYPFTTLTPNLGVVEVGEGQSFVMADIPGLIEGAHAGVGLGHQFLRHVERTRVLL 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 + +S E + ++ +L EL YN +L K ++ +++DT ++ + L + K +A Sbjct: 242 MVLDMSGFEGRDPVDDFEVLLKELKLYNEQLLTKPLVIAANKMDTANAQENLEKLKQHIA 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 + P S++TG G+ ++ L + I ++ E+ Sbjct: 302 GKYEIYP--ISALTGEGLKPLIYRLWEIISTLPRES 335 >gi|153809273|ref|ZP_01961941.1| hypothetical protein BACCAC_03585 [Bacteroides caccae ATCC 43185] gi|149128043|gb|EDM19264.1| hypothetical protein BACCAC_03585 [Bacteroides caccae ATCC 43185] Length = 388 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 146/327 (44%), Positives = 213/327 (65%), Gaps = 7/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+ GGPDGG GGRGG + ++ N TL+ ++ Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYCPNGGPDGGDGGRGGHIILRGNRNYWTLLHLKFD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G G D ++ VP GT V+ + +CD+ ++GQ +IL GG Sbjct: 66 RHAMAGHGESGSKNRSFGKDGADKIIEVPCGTVVYNAETGEYLCDVTEDGQEVILLRGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + ++LKL+AD+G++G PNAGKST L++++ A Sbjct: 126 GGQGNWHFKTATRQAPRFAQPGEPMQEMTVIMELKLLADVGLVGFPNAGKSTLLSAISAA 185 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIADYPFTTL PNLGIV ++G K F++ADIPGII+ A QG G+G RFL+H ER +L Sbjct: 186 KPKIADYPFTTLEPNLGIVSYRDG-KSFVMADIPGIIEGASQGKGLGLRFLRHIERNSLL 244 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L +V A ++++ Y+ +L+ELS +N E+ K ++ +++ D +D + + + L Sbjct: 245 LFMVPADSDDIRKEYEILLNELSTFNPEMLDKQRVLAITKSDMLDQELMDEIEPTLP--- 301 Query: 301 GQVPFEF-SSITGHGIPQILECLHDKI 326 VP F SS++G GI + + L +++ Sbjct: 302 AGVPHVFISSVSGLGISVLKDILWEEL 328 >gi|319778974|ref|YP_004129887.1| GTP-binding protein Obg [Taylorella equigenitalis MCE9] gi|317108998|gb|ADU91744.1| GTP-binding protein Obg [Taylorella equigenitalis MCE9] Length = 361 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 153/335 (45%), Positives = 219/335 (65%), Gaps = 9/335 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G SFRREKFI GGPDGG GGRGG + A N+NTLID+R Sbjct: 1 MKFVDEATIEVIAGKGGNGSASFRREKFIPKGGPDGGDGGRGGSIIAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A++GE G ++ GA ED+VL +PVGT +++ D + DLD+ G+ ++LA G Sbjct: 61 YARLHRARNGENGRGSDQYGAAAEDIVLRMPVGTVIYDADTGEQLFDLDKHGEEVVLAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ + + ++LK++AD+G++G+PNAGKSTF+ V+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQFTYGKEGEHRNLRMELKVLADVGLLGMPNAGKSTFITRVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G FL+H RT + Sbjct: 181 NAKPKIADYPFTTLHPNLGVVRTSDSRSFVVADIPGLIEGASEGAGLGHLFLRHLTRTSL 240 Query: 240 LLHI--VSALEENVQAAYQCILD------ELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 LLHI VS L+ V + + + D EL Y+ EL K + L++ D +++ R Sbjct: 241 LLHIVDVSNLDPEVDSITKAVKDARAISEELRKYSEELYNKPRWLILNKFDMIENPEEVR 300 Query: 292 KKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +K A + S++TG G ++ L D I Sbjct: 301 EKFVKAYGWDGPVYTISALTGEGTQNLVYALQDYI 335 >gi|309804193|ref|ZP_07698271.1| Obg family GTPase CgtA [Lactobacillus iners LactinV 11V1-d] gi|315653490|ref|ZP_07906411.1| Spo0B-associated GTP-binding protein [Lactobacillus iners ATCC 55195] gi|329921295|ref|ZP_08277733.1| Obg family GTPase CgtA [Lactobacillus iners SPIN 1401G] gi|308163776|gb|EFO66045.1| Obg family GTPase CgtA [Lactobacillus iners LactinV 11V1-d] gi|315489181|gb|EFU78822.1| Spo0B-associated GTP-binding protein [Lactobacillus iners ATCC 55195] gi|328934587|gb|EGG31091.1| Obg family GTPase CgtA [Lactobacillus iners SPIN 1401G] Length = 427 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 145/337 (43%), Positives = 219/337 (64%), Gaps = 8/337 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G+GG G ++FR EK+ GGP GG GGRGG +++ A S L TL+DFR++ Sbjct: 2 FVDQTKIEVQAGNGGDGAVAFRHEKYAPLGGPAGGDGGRGGSIYLVADSGLRTLMDFRFR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++GE G +++ G +DV L VP+GT V++ L+ DL GQ++ +A GG Sbjct: 62 RKFKAENGENGRIKSQYGRGAKDVFLKVPMGTAVYDFYTNELLGDLVGNGQKLRVACGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST AP A G G+ + + L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 122 GGRGNIHFATSTRTAPEIAENGEPGEFRTLRLELKVLADVGLVGFPSVGKSTLLSVVTKA 181 Query: 183 KPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG +V + ++F +AD+PG+IK A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIAAYEFTTLTPNLGMVVLDDGRDFSMADLPGLIKGASQGVGLGIQFLRHVERTKVIL 241 Query: 242 HIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++S N + AY+ I EL+ Y ++L KK EIV SQ+D S+ K EL Sbjct: 242 HLISMDPNNGRDAYEDYLTIRQELAGYTNDLTKKTEIVVASQMDIPGSE---EKLQELKK 298 Query: 299 QCG-QVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + ++ + SSIT G+ ++ D +++ + E Sbjct: 299 KLNDKIIYPISSITHKGVRDLMIKAADIVYAANDQVE 335 >gi|312872382|ref|ZP_07732452.1| Obg family GTPase CgtA [Lactobacillus iners LEAF 2062A-h1] gi|311092205|gb|EFQ50579.1| Obg family GTPase CgtA [Lactobacillus iners LEAF 2062A-h1] Length = 427 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 145/337 (43%), Positives = 219/337 (64%), Gaps = 8/337 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G+GG G ++FR EK+ GGP GG GGRGG +++ A S L TL+DFR++ Sbjct: 2 FVDQTKIEVQAGNGGDGAVAFRHEKYAPLGGPAGGDGGRGGSIYLVADSGLRTLMDFRFR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++GE G +++ G +DV L VP+GT V++ L+ DL GQ++ +A GG Sbjct: 62 RKFKAENGENGRIKSQYGRGAKDVFLKVPMGTAVYDFYTNELLGDLVGNGQKLRVACGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST AP A G G+ + + L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 122 GGRGNIHFATSTRTAPEIAENGEPGEFRTLRLELKVLADVGLVGFPSVGKSTLLSVVTKA 181 Query: 183 KPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG +V + ++F +AD+PG+IK A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIAAYEFTTLTPNLGMVVLDDGRDFSMADLPGLIKGASQGVGLGIQFLRHVERTKVIL 241 Query: 242 HIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++S N + AY+ I EL+ Y ++L KK EIV SQ+D S+ K EL Sbjct: 242 HLISMDPNNGRDAYEDYLTIRQELAGYTNDLTKKTEIVVASQMDIPGSE---EKLQELKK 298 Query: 299 QC-GQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + ++ + SSIT G+ ++ D +++ + E Sbjct: 299 KLNNKIIYPISSITHKGVRDLMIKAADIVYAANDQVE 335 >gi|319901286|ref|YP_004161014.1| GTP-binding protein Obg/CgtA [Bacteroides helcogenes P 36-108] gi|319416317|gb|ADV43428.1| GTP-binding protein Obg/CgtA [Bacteroides helcogenes P 36-108] Length = 393 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 147/327 (44%), Positives = 212/327 (64%), Gaps = 7/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+I GGPDGG GGRGG V ++ N TL+ +Y Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYIPNGGPDGGDGGRGGHVILRGNRNYWTLLHLKYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G GED ++ VP GT V+ + +CD+ + GQ +IL GG Sbjct: 66 RHIMAGHGESGSKNRSFGKDGEDRIIEVPCGTVVYNAETGEYLCDVTEHGQEVILLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + ++LKL+AD+G++G PNAGKST L++V+ A Sbjct: 126 GGLGNWHFKTATRQAPRFAQPGEPMQEMTVIMELKLLADVGLVGFPNAGKSTLLSTVSSA 185 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA+YPFTTL PNLGIV ++G K F++ADIPGII+ A G G+G RFL+H ER +L Sbjct: 186 KPKIANYPFTTLEPNLGIVSYRDG-KSFVMADIPGIIEGASAGKGLGLRFLRHIERNSLL 244 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L +V A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 245 LFMVPADSDDIRKEYEILLNELRTFNPEMLDKQRVLAITKSDMLDQELMDEIEPALPE-- 302 Query: 301 GQVPFEF-SSITGHGIPQILECLHDKI 326 +P F S+I+G GI + + L +++ Sbjct: 303 -GIPHIFISAISGMGISVLKDILWEEL 328 >gi|240948909|ref|ZP_04753265.1| GTPase ObgE [Actinobacillus minor NM305] gi|240296724|gb|EER47335.1| GTPase ObgE [Actinobacillus minor NM305] Length = 391 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 149/332 (44%), Positives = 216/332 (65%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRVEAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ + A GE G +G +G D+ L VPVGT+ + D +I DL + G ++++A G Sbjct: 61 FEKRYAAGRGENGRSAGCTGHRGNDITLRVPVGTRAIDNDTQEVIGDLTKHGMKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTNGTPGEKRDLLLELMLLADVGMLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+ + G + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVARVGADRSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V + E + I EL Y+ +L +K + ++IDT+ + ++ E+ Sbjct: 241 LIHLVDIMPIDESDPAHNISVIESELYQYSEKLSEKPTWLVFNKIDTIGEEEAEKRAKEI 300 Query: 297 ATQCGQV--PFEFSSITGHGIPQILECLHDKI 326 A Q G + S+ TG + Q+ + D I Sbjct: 301 AEQIGWEGDYYLISAATGQNVQQLTRDIMDFI 332 >gi|223042113|ref|ZP_03612286.1| hypothetical GTP-binding protein [Actinobacillus minor 202] gi|223017101|gb|EEF15540.1| hypothetical GTP-binding protein [Actinobacillus minor 202] Length = 391 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 149/332 (44%), Positives = 215/332 (64%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRVEAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ + A GE G +G +G D+ L VPVGT+ + D +I DL + G ++++A G Sbjct: 61 FEKRYAAGRGENGRSAGCTGHRGNDITLRVPVGTRAIDNDTQEVIGDLTKHGMKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTNGTPGEKRDLLLELMLLADVGMLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+ + G + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVARVGADRSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V + E + I EL Y+ +L +K + ++IDT+ + + E+ Sbjct: 241 LIHLVDIMPIDESDPAHNISVIESELYQYSEKLSEKPTWLVFNKIDTIGEEEAKERAKEI 300 Query: 297 ATQCGQV--PFEFSSITGHGIPQILECLHDKI 326 A Q G + S+ TG + Q+ + D I Sbjct: 301 AEQIGWEGDYYLISAATGQNVQQLTRDIMDFI 332 >gi|302875577|ref|YP_003844210.1| GTP-binding protein Obg/CgtA [Clostridium cellulovorans 743B] gi|307690106|ref|ZP_07632552.1| GTPase ObgE [Clostridium cellulovorans 743B] gi|302578434|gb|ADL52446.1| GTP-binding protein Obg/CgtA [Clostridium cellulovorans 743B] Length = 429 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 143/323 (44%), Positives = 215/323 (66%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AKVYI+SG+GG G ISFRREK++ GGPDGG GG GG+V I+ +N+ TL+DF+Y Sbjct: 2 FIDTAKVYIKSGNGGDGAISFRREKYVPLGGPDGGDGGNGGNVIIKVDTNITTLLDFKYT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A++G G G KG+D+++ VP+GT V + + ++ DL ++A GG Sbjct: 62 KKFIAENGVNGGTSKCFGKKGDDLIVKVPMGTIVKDVETDKIMADLSHPDDFFVVARGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST QAP +A PG+ G+E+ I L+LKL+AD+G++G PN GKST L+ VT+A Sbjct: 122 GGKGNVHFTTSTRQAPNFAEPGMPGEERWINLELKLLADVGLLGFPNVGKSTLLSRVTKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTT+ PNLG+V G + F++ADIPGII+ A +G G+G +FL+H ERT +L+ Sbjct: 182 KPKIANYHFTTIKPNLGVVSVNGIQPFVMADIPGIIEGASEGVGLGLQFLRHIERTRLLI 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V S +E + ++ I +EL Y+ +L + +IV ++ D + + + + Sbjct: 242 HVVDISGIEGRDPIEDFKKINEELKKYSVKLWDRPQIVAANKSDMLYEEEKYLEFEKAVK 301 Query: 299 QCG-QVPFEFSSITGHGIPQILE 320 + G F+ S+ TG GI +++ Sbjct: 302 EMGYDKVFKISAGTGMGIDPLMK 324 >gi|225378063|ref|ZP_03755284.1| hypothetical protein ROSEINA2194_03723 [Roseburia inulinivorans DSM 16841] gi|225210064|gb|EEG92418.1| hypothetical protein ROSEINA2194_03723 [Roseburia inulinivorans DSM 16841] Length = 457 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 143/323 (44%), Positives = 213/323 (65%), Gaps = 6/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D A + I+SG GG G +SFRREK++ GGPDGG GGRGGDV LNTL DFR++ Sbjct: 32 FADRATIIIKSGKGGNGHVSFRREKYVPNGGPDGGDGGRGGDVIFVVDEGLNTLTDFRHR 91 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A++GE+G K+ G G D++L VP GT + + + +I D+ + +R ++ GG Sbjct: 92 RKFAAENGEEGGKKKCHGKDGADLILKVPAGTVIKDAESDKVIADMSGDNKRQVILKGGR 151 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+H+ ++T QAP YA PG G E + L+LK+IAD+G++G PN GKST L+ VT A Sbjct: 152 GGQGNSHYATATMQAPKYAQPGGEGIEIEVKLELKVIADVGLVGFPNVGKSTLLSRVTNA 211 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V +G K F++ADIPG+I+ A +G G+G FL+H ERT V++ Sbjct: 212 QPKIANYHFTTLQPNLGVVDLDGAKGFVIADIPGLIEGASEGVGLGLEFLRHIERTRVMI 271 Query: 242 HIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV--DSDTLARKKNEL 296 H+V A + A + I EL+AY+ EL KK +++ ++ID++ D + + + + Sbjct: 272 HVVDAAGTEGRDPIADIKAIDKELAAYDPELLKKPQVIAANKIDSIYGDENEIIKALKDE 331 Query: 297 ATQCGQVPFEFSSITGHGIPQIL 319 + G F S+++G G+ ++L Sbjct: 332 FEKDGIKVFPISAVSGQGLKELL 354 >gi|325577656|ref|ZP_08147931.1| Spo0B-associated GTP-binding protein [Haemophilus parainfluenzae ATCC 33392] gi|325160401|gb|EGC72527.1| Spo0B-associated GTP-binding protein [Haemophilus parainfluenzae ATCC 33392] Length = 390 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 148/332 (44%), Positives = 218/332 (65%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREKFI GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFIDEALIRVEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLVADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A+ GE G + +G +G+++ L VPVGT+ + D ++ DL + G ++++A G Sbjct: 61 FTKRFAAERGENGHSSDCTGRRGKNITLRVPVGTRAIDHDTKEVLGDLTKHGAKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLLLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDESHSFVVADIPGLIEGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHIV--SALEENVQAAYQCILD-ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V + ++E+ A I++ EL Y+ +L K + ++IDT+ + + E+ Sbjct: 241 LIHLVDINPIDESDPADNISIIESELFQYSEKLADKPRWLVFNKIDTMTEEEAHERAQEI 300 Query: 297 ATQCGQVP--FEFSSITGHGIPQILECLHDKI 326 + G S+ TG +P + + D I Sbjct: 301 TERLGWEEGYHLISAATGKNVPPLCRDIMDFI 332 >gi|312871429|ref|ZP_07731524.1| Obg family GTPase CgtA [Lactobacillus iners LEAF 3008A-a] gi|311093082|gb|EFQ51431.1| Obg family GTPase CgtA [Lactobacillus iners LEAF 3008A-a] Length = 427 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 145/337 (43%), Positives = 219/337 (64%), Gaps = 8/337 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G+GG G ++FR EK+ GGP GG GGRGG +++ A S L TL+DFR++ Sbjct: 2 FVDQTKIEVQAGNGGDGAVAFRHEKYAPLGGPAGGDGGRGGSIYLVADSGLRTLMDFRFR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++GE G +++ G +DV L VP+GT V++ L+ DL GQ++ +A GG Sbjct: 62 RKFKAENGENGRIKSQYGRGAKDVFLKVPMGTAVYDFYTNELLGDLVGNGQKLRVACGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST AP A G G+ + + L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 122 GGRGNIHFATSTRTAPEIAENGEPGEFRTLRLELKVLADVGLVGFPSVGKSTLLSVVTKA 181 Query: 183 KPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG +V + ++F +AD+PG+IK A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIAAYEFTTLTPNLGMVVLDDGRDFSMADLPGLIKGASQGVGLGIQFLRHVERTKVIL 241 Query: 242 HIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++S N + AY+ I EL+ Y ++L KK EIV SQ+D S+ K EL Sbjct: 242 HLISMDPNNGRDAYEDYLTIRQELAGYTNDLTKKTEIVVASQMDIPGSE---EKLQELKK 298 Query: 299 QC-GQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + ++ + SSIT G+ ++ D +++ + E Sbjct: 299 KLNNKIIYPISSITHKGVRDLMIKAADIVYAANDQVE 335 >gi|251791046|ref|YP_003005767.1| GTPase ObgE [Dickeya zeae Ech1591] gi|247539667|gb|ACT08288.1| GTP-binding protein Obg/CgtA [Dickeya zeae Ech1591] Length = 391 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 137/305 (44%), Positives = 211/305 (69%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+D+ + VPVGT++ ++ ++ D+ + Q++++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDITIKVPVGTRILDKSTGEVLGDMTRNQQKLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+E+ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTNGTPGEERELLLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEKSFVVADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ E + + I++EL Y++ L +K + +++D ++ ++ + Sbjct: 241 LLHLIDLAPIDESDPIENAKVIVNELQQYSASLAEKPRWLVFNKVDMLEKGEAEKRAKAI 300 Query: 297 ATQCG 301 A G Sbjct: 301 AAALG 305 >gi|145629952|ref|ZP_01785734.1| GTP-binding protein [Haemophilus influenzae R3021] gi|144984233|gb|EDJ91656.1| GTP-binding protein [Haemophilus influenzae R3021] Length = 390 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 152/340 (44%), Positives = 218/340 (64%), Gaps = 6/340 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE+ + I +GDGG G +SFRREKFI GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFIDESLIRIEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A+ GE G + +G +G+D++L VPVGT+ + D + DL + GQ++++A G Sbjct: 61 FNKRFAAERGENGRSSDCTGRRGKDIILPVPVGTRAIDNDTKETLGDLTEHGQKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLLLELMLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+VK + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVKVDDSHSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H+V N I EL Y+ +L +K + ++ID + + + E+ Sbjct: 241 LIHLVDIAPIDGSNPADNVAIIESELFQYSEKLSEKPRWLVFNKIDMISDEEAEERAREI 300 Query: 297 ATQCG--QVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 A Q G + + S+ TG + + + D I + E E Sbjct: 301 AEQLGWEEDYYFISAATGKNVSPLCRDIMDFIIANPREAE 340 >gi|291519388|emb|CBK74609.1| Obg family GTPase CgtA [Butyrivibrio fibrisolvens 16/4] Length = 427 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 142/324 (43%), Positives = 212/324 (65%), Gaps = 8/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+ I+SG GG G +SFRREK++ GGP+GG GG+GGDV + LNTL+D+R++ Sbjct: 2 FADRAKIIIKSGKGGDGHVSFRREKYVPNGGPNGGDGGKGGDVIFEVDPGLNTLVDYRHR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A GE+G K N G GED++L VP GT + + + +I D+ + +R ++ PGG Sbjct: 62 RKFAAGAGEEGGKDNCHGKNGEDLILKVPEGTVIKDAETGKVIADMSGDNKRQVVLPGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST QAP YA PG+ E + L+LK+IAD+G++G PN GKSTFL+ VT A Sbjct: 122 GGLGNQHFATSTMQAPKYAKPGVDAIELEVILELKVIADVGLVGYPNVGKSTFLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI +Y FTTL PNLG+V + F++ADIPG+I+ A +G G+G FL+H ERT V++ Sbjct: 182 QPKIGNYHFTTLSPNLGVVDVDDINGFVIADIPGLIEGASEGIGLGHEFLRHIERTKVII 241 Query: 242 HIV---SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKNE 295 H+V S + + I EL AY+SEL KK +++ +++D + ++ + K E Sbjct: 242 HMVDGASVEGRDPVEDIKTISAELEAYDSELLKKPQVIAANKMDVIGEESNEVIEALKAE 301 Query: 296 LATQCGQVPFEFSSITGHGIPQIL 319 + +V + S+++G G+ ++L Sbjct: 302 FEPKGIKV-YPISAVSGKGLKELL 324 >gi|290968185|ref|ZP_06559729.1| Obg family GTPase CgtA [Megasphaera genomosp. type_1 str. 28L] gi|290781763|gb|EFD94347.1| Obg family GTPase CgtA [Megasphaera genomosp. type_1 str. 28L] Length = 424 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 138/324 (42%), Positives = 217/324 (66%), Gaps = 7/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A+++++SG GG G SFR EKF+ GGP+GG GG+GGDV + A N+NTL+DFRY+ Sbjct: 2 FIDRARIFVQSGKGGDGMSSFRHEKFVPKGGPNGGDGGQGGDVVLVADRNVNTLVDFRYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ G G N+ G + +TVP+GT V EE+ +I DL ++GQR ++A GG Sbjct: 62 RLFKAKPGGNGQSSNKYGRDAAALEITVPLGTVVREEESDRVIADLSRDGQRAVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF++S N+ P +A G G+E+ + ++LK++AD+G++G P+ GKS+ L V+ A Sbjct: 122 GGRGNWHFRTSANRTPTFAEKGEPGEERWLKMELKVLADVGLLGYPSVGKSSILRKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P++A Y FTTL P LG+V ++ F++ADIPG+I A +G G+G FL+H ERT +L+ Sbjct: 182 QPEVAAYHFTTLNPILGVVDLSEHRSFVMADIPGLIDGAAEGVGLGHDFLRHIERTKILI 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV--DSDTLARKKNEL 296 H+ VS +E + Y+ I EL+ Y+ +L KK +++ +++D + D + L R ++ + Sbjct: 242 HVLDVSGMEGRDPLEDYEKINAELAKYSEKLIKKKQLIAANKVDLLAADREMLTRVESYM 301 Query: 297 ATQCGQVPFEFSSITGHGIPQILE 320 A + GQ F ++TG G+ +LE Sbjct: 302 AAR-GQEVFPICALTGEGLEALLE 324 >gi|229824061|ref|ZP_04450130.1| hypothetical protein GCWU000282_01365 [Catonella morbi ATCC 51271] gi|229786415|gb|EEP22529.1| hypothetical protein GCWU000282_01365 [Catonella morbi ATCC 51271] Length = 434 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 142/335 (42%), Positives = 212/335 (63%), Gaps = 11/335 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD A+V +++G GG G ++FRREK++ GGP GG GGRGG V + L TL+DFRY Sbjct: 4 FLDRARVTVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGSVIFRVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA++GE GM + G ED++++VP GT + + L+ DL ++GQ ++A GG Sbjct: 64 RHFKAKNGENGMSKGMYGKAAEDLIVSVPPGTIIRDAATDKLLADLVEQGQECVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E + L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 124 GGRGNIKFATHKNPAPSIAENGEPGEEADLQLELKVLADVGLVGYPSVGKSTLLSVISNA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+VK Y +EFI+AD+PG+I+ A QG G+G FL+H ERT VLL Sbjct: 184 KPKIADYQFTTLTPNLGVVKLNYDQEFIVADMPGLIEGASQGVGLGIHFLRHIERTKVLL 243 Query: 242 HIVSALEENVQAAYQCILD---ELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ + + +Q LD EL++Y+ +L + ++ +++D + + L K +L Sbjct: 244 HVIDMAATHERDPFQDYLDIMHELASYHEKLLLRPMVIVANKMDQSQAQENLPSFKQQLE 303 Query: 298 TQCGQ----VP--FEFSSITGHGIPQILECLHDKI 326 C Q +P FE S+ G+ +L +D + Sbjct: 304 AYCQQEGLALPAIFEVSAWQAKGLKPLLAFTYDLV 338 >gi|320103232|ref|YP_004178823.1| GTP-binding protein Obg/CgtA [Isosphaera pallida ATCC 43644] gi|319750514|gb|ADV62274.1| GTP-binding protein Obg/CgtA [Isosphaera pallida ATCC 43644] Length = 406 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 144/336 (42%), Positives = 219/336 (65%), Gaps = 6/336 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D A +Y++ GDGG G +SFR+EK++ GGPDGG GG GG V I+A L L +Q Sbjct: 2 FSDRAILYVKGGDGGQGVVSFRKEKYVPRGGPDGGDGGHGGHVIIEAVEGLTNLAHLTHQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KAQ G G + + GA +++ VP GT V + D ++ DL + G +++A GG Sbjct: 62 RHWKAQRGGHGSGKTKHGASAPPLIIPVPPGTIVKDRDRNLVLRDLKRVGDWVVVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FKS+TN+AP G G+E+ + L+L++IAD+G++GLPNAGKST L+ V+RA Sbjct: 122 GGRGNHYFKSATNRAPRIRELGKPGEERWLILELQVIADVGLLGLPNAGKSTLLSRVSRA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IADYPFTT YPNLG+V+ + + F++ADIPG+I+ AH G G+G FL+H ERT +L+ Sbjct: 182 RPEIADYPFTTKYPNLGLVRLDHERAFVMADIPGLIEGAHAGHGLGHEFLRHVERTKLLV 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V A + A Y I DE++ Y++ L ++ E+V L+++D SD L R + L Sbjct: 242 HLVEAAPLDGTDPVANYHLIRDEVARYSARLAERPELVVLTKLDAAPSDVLERFRAALGP 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + F SS+TG G+P +L + +++ + + + Sbjct: 302 D--REVFGVSSVTGQGLPPLLNRIVERLNEVAADQD 335 >gi|271499163|ref|YP_003332188.1| GTP-binding protein Obg/CgtA [Dickeya dadantii Ech586] gi|270342718|gb|ACZ75483.1| GTP-binding protein Obg/CgtA [Dickeya dadantii Ech586] Length = 391 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 138/305 (45%), Positives = 211/305 (69%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+D+ + VPVGT+V ++ ++ D+ + Q++++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDITIKVPVGTRVLDKSTGEVLGDMTRNQQKLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN+ FKSS N+AP G G+E+ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNSRFKSSVNRAPRQKTNGTPGEERELLLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEKSFVVADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ E + + I++EL Y++ L +K + +++D ++ + + Sbjct: 241 LLHLIDLAPIDESDPIENAKVIVNELQQYSASLAEKPRWLVFNKVDLLEKSEAESRAKAI 300 Query: 297 ATQCG 301 A G Sbjct: 301 AEALG 305 >gi|51891570|ref|YP_074261.1| GTPase ObgE [Symbiobacterium thermophilum IAM 14863] gi|81389618|sp|Q67SC6|OBG_SYMTH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|51855259|dbj|BAD39417.1| GTP-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 425 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 150/329 (45%), Positives = 215/329 (65%), Gaps = 6/329 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A++Y++ GDGG G S RREK++ GGP GG GGRGGDV LNTL+DF+YQ Sbjct: 2 FVDVARIYVKGGDGGRGSNSVRREKYVPQGGPWGGDGGRGGDVVFVVDPGLNTLVDFKYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE G + G KGED+V+ VP GT V ++D ++ DL + GQR ++A GG Sbjct: 62 KHFKAERGEHGGPKGMHGRKGEDLVIKVPPGTVVKDDDTGEVLFDLVEPGQRAVVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + TN+ P + G G+E+ + L+LK++AD+G++G PNAGKSTFL++V+ A Sbjct: 122 GGRGNMRFATPTNKCPTFYEKGEPGEERWLLLELKVVADVGLVGFPNAGKSTFLSAVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+YPFTTL P LG+V G + F++ADIPG+I+ AHQG G+G FL+H ERT VL+ Sbjct: 182 RPKIANYPFTTLTPVLGVVDLGEGRSFVIADIPGLIEGAHQGVGLGHEFLRHVERTKVLI 241 Query: 242 HIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ + + + I +EL AYN EL + +V +++D D+ + L R + L Sbjct: 242 HVLDGAGTEGRDPLSDFDVIHNELRAYNPELAARPTLVAFNKMDLPDARENLPRVREALE 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI 326 + +V F S T G +LE +D I Sbjct: 302 KRGYRV-FPISGATREGFRPLLEAAYDLI 329 >gi|227113762|ref|ZP_03827418.1| GTPase ObgE [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227328598|ref|ZP_03832622.1| GTPase ObgE [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 390 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 139/305 (45%), Positives = 210/305 (68%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+D+ + VPVGT+V ++ ++ D+ + Q +++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGKDITIKVPVGTRVLDQGTGEVLGDMTRHQQSLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+E+ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTSGTKGEERELTLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEQSFVVADIPGLIEGASEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V E + + I++EL Y + L +K + +++D +D ++ ++ Sbjct: 241 LLHLVDLAPIDESDPIENAKIIINELEQYGAGLAEKPRWLVFNKVDLIDKAEAEKRAKDI 300 Query: 297 ATQCG 301 A G Sbjct: 301 AAALG 305 >gi|253575706|ref|ZP_04853042.1| GTP-binding protein Obg/CgtA [Paenibacillus sp. oral taxon 786 str. D14] gi|251845044|gb|EES73056.1| GTP-binding protein Obg/CgtA [Paenibacillus sp. oral taxon 786 str. D14] Length = 436 Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 140/323 (43%), Positives = 215/323 (66%), Gaps = 6/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK+Y++ GDGG G ++FRREK++ GGP GG GG+GGDV + L TL+DFRYQ Sbjct: 2 FVDKAKIYVKGGDGGDGLVAFRREKYVPEGGPAGGDGGKGGDVIFRVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKG +++ GA E++++ VP GT V ++D ++ DL + GQ +++A GG Sbjct: 62 RHFKAQRGEKGRNKSQHGANAENMIVRVPPGTVVIDDDTQEVLADLTRHGQEVVVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPNNPAPELAEHGEEGEERWVVLELKVMADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V G + F++AD+PG+I+ AH+G G+G FL+H ERT +++ Sbjct: 182 KPKIGAYHFTTITPNLGVVDVGDGRSFVMADLPGLIEGAHEGVGLGHEFLRHVERTRLIV 241 Query: 242 HIVSALEENVQAAY---QCILDELSAYNSELRKKIEIVGLSQIDTVDSDT-LARKKNELA 297 H+V + + Q I DEL YN++L K+ +IV +++D ++ L + + E+A Sbjct: 242 HVVDMAGSEGRDPFDDWQKINDELRLYNADLEKRPQIVAANKMDMPEAAANLEKFRAEVA 301 Query: 298 TQCGQVP-FEFSSITGHGIPQIL 319 G + SS+T G+ ++L Sbjct: 302 KVRGDLEIMPISSLTRQGVQELL 324 >gi|313204806|ref|YP_004043463.1| GTP-binding protein obg/cgta [Paludibacter propionicigenes WB4] gi|312444122|gb|ADQ80478.1| GTP-binding protein Obg/CgtA [Paludibacter propionicigenes WB4] Length = 377 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 140/325 (43%), Positives = 204/325 (62%), Gaps = 3/325 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K++ RSG GG G R+K GGPDGG GGRGG + ++ + N TLI +Y Sbjct: 6 FVDYVKIFCRSGKGGPGSKHLYRDKLTTKGGPDGGDGGRGGHIILRGSKNHWTLIHLKYA 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A GE G G GED V+ VP GT V++ + + D+ ++G+ ++L GG Sbjct: 66 RHIYAGDGESGGLSRSFGKDGEDKVIEVPCGTVVYDAETGEFLSDIKEDGEEVVLIKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+S+TNQ P +A PG EK + L+LK++AD+G++G PNAGKST L+ V+ A Sbjct: 126 GGQGNWHFRSATNQTPRFAQPGEASIEKTVILQLKVLADVGLVGFPNAGKSTLLSVVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+YPFTTL PNLGIV + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 KPEIANYPFTTLVPNLGIVSYRDDRSFVMADIPGIIEGASEGRGLGLRFLRHIERNSILL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A +++ A Y +L+EL YN EL K I+ +++ D +D + A K + T Sbjct: 246 FMIPADTDDIIAEYNILLNELKQYNPELVDKQRILAITKCDMLDEELTAEIKKLVPTDIQ 305 Query: 302 QVPFEFSSITGHGIPQILECLHDKI 326 V SS+TG G+ ++ + + +I Sbjct: 306 SV--FISSVTGLGLAELKDLIWTEI 328 >gi|321312322|ref|YP_004204609.1| GTPase CgtA [Bacillus subtilis BSn5] gi|320018596|gb|ADV93582.1| GTPase CgtA [Bacillus subtilis BSn5] Length = 428 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 144/322 (44%), Positives = 215/322 (66%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KVY++ GDGG G ++FRREK++ GGP GG GG+GGDV + L TL+DFRY+ Sbjct: 2 FVDQVKVYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGKGGDVVFEVDEGLRTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM +N+ G +D+V+ VP GT V ++D +I DL + GQR ++A GG Sbjct: 62 KHFKAIRGEHGMSKNQHGRNADDMVIKVPPGTVVTDDDTKQVIADLTEHGQRAVIARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP + G G+E+ I L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATPANPAPQLSENGEPGKERYIVLELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+V+ + + F++AD+PG+I+ AHQG G+G +FL+H ERT V++ Sbjct: 182 KPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLIEGAHQGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 H++ S LE + Y I ELS YN L ++ +I+ +++D + ++ L K +L Sbjct: 242 HVIDMSGLEGRDPYEDYLTINQELSEYNLRLTERPQIIVANKMDMPEAAENLEAFKEKLT 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 P S++T G+ ++L Sbjct: 302 DDYPVFP--ISAVTREGLRELL 321 >gi|258623399|ref|ZP_05718403.1| GTP1/Obg family protein [Vibrio mimicus VM573] gi|258627047|ref|ZP_05721845.1| GTP1/Obg family protein [Vibrio mimicus VM603] gi|262164110|ref|ZP_06031849.1| GTP-binding protein Obg [Vibrio mimicus VM223] gi|262172462|ref|ZP_06040140.1| GTP-binding protein Obg [Vibrio mimicus MB-451] gi|258580721|gb|EEW05672.1| GTP1/Obg family protein [Vibrio mimicus VM603] gi|258584365|gb|EEW09110.1| GTP1/Obg family protein [Vibrio mimicus VM573] gi|261893538|gb|EEY39524.1| GTP-binding protein Obg [Vibrio mimicus MB-451] gi|262027638|gb|EEY46304.1| GTP-binding protein Obg [Vibrio mimicus VM223] Length = 390 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 138/291 (47%), Positives = 200/291 (68%), Gaps = 4/291 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +++GDGG G +SF REKF+ GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEAVIKVQAGDGGNGVVSFWREKFVTNGGPDGGDGGDGGDVYMIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ G+ G N +G +G+D VL VPVGT+ + +I ++ + G+++++A G Sbjct: 61 FQRFYEAERGQNGGGGNCTGKRGKDKVLRVPVGTRAVDIHTNEIIAEVAEHGKKVMIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSS N++P G G+ + I L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNARFKSSVNRSPRQKTMGTKGELRDIRLELLLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVSVLPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH++ L + N I+DEL Y+ +L K + +++D V + Sbjct: 241 LLHVIDILPMDQSNPAQNALTIIDELEQYSEKLANKPRWLVFNKVDLVSEE 291 >gi|256831179|ref|YP_003159907.1| GTP-binding protein Obg/CgtA [Desulfomicrobium baculatum DSM 4028] gi|256580355|gb|ACU91491.1| GTP-binding protein Obg/CgtA [Desulfomicrobium baculatum DSM 4028] Length = 345 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 155/328 (47%), Positives = 219/328 (66%), Gaps = 7/328 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEAK+ IRSG GG G +SFRREK++ GGPDGG GG+GGDV ++A +NL TL D+R Sbjct: 1 MRFVDEAKIIIRSGSGGQGSVSFRREKYVPRGGPDGGDGGKGGDVIMRANNNLLTLYDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEE-DGIS-LICDLDQEGQRIILA 118 + +A+ G G R G GED ++ VPVGTQVFEE DG LI D ++GQ I++A Sbjct: 61 HASFQEAESGRPGGGRLCYGRAGEDKIVEVPVGTQVFEEVDGQERLIADFTKDGQEIVVA 120 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GN HFKSS Q P +A PG G EK I L+LK+ AD+G++GLPNAGKST ++ Sbjct: 121 EGGRGGKGNTHFKSSVMQVPRFAQPGEPGVEKYIRLELKVFADVGLLGLPNAGKSTLISR 180 Query: 179 VTRAKPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 ++ A+PKIA YPFTTL PNLG+V E ++ ++ADIPG+I+ AH G G+G FL+H ER+ Sbjct: 181 ISAARPKIAAYPFTTLAPNLGVVIDEHERKLVVADIPGLIEGAHTGQGLGHTFLRHVERS 240 Query: 238 HVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 L+HI+S + NV+ + + + DEL ++ L +K +I +++ID D + LA + Sbjct: 241 RFLVHILSIEDVNVEDPLSGFHILDDELRKFDPALGEKPQIRVINKIDLADEERLAEVRA 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECL 322 +V F S++ G+ +L+ + Sbjct: 301 AFDRLGLKVYF-MSALDETGVDVVLDAM 327 >gi|116617638|ref|YP_818009.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122272161|sp|Q03YT6|OBG_LEUMM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|116096485|gb|ABJ61636.1| Predicted GTPase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 439 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 141/336 (41%), Positives = 217/336 (64%), Gaps = 11/336 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D+A++ +++G GG G +SFR EKF+ GGP GG GG GG + + L TL+DFR Sbjct: 1 MAFVDQAQIEVKAGKGGDGIVSFRHEKFVAMGGPFGGDGGHGGSIIFKVDEGLRTLMDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HFKAQ G G + +GA ++ V+ VP GT V + D ++ D+ + GQ +++A G Sbjct: 61 YNRHFKAQPGGNGGTKGMTGASADNRVVKVPQGTTVSDADTGEVLADMLENGQELVVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF + N AP + G GQ + + L+LK++AD+G++G P+AGKST L+ V+ Sbjct: 121 GRGGRGNIHFATPANPAPELSENGEPGQIRNLKLELKVLADVGLVGFPSAGKSTLLSVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+A Y FTTL PN+G+V+ + ++F++AD+PG+I+ A QG G+G +FL+H ERT V Sbjct: 181 NAKPKVAAYHFTTLSPNIGMVRLDDDRDFVMADLPGLIEGASQGIGLGFQFLRHVERTKV 240 Query: 240 LLHIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNE 295 +LH+V S +E + Y+ ILDEL Y+ + + +IV +++D DS + LA+ + E Sbjct: 241 ILHLVDMSGIEGTDPYTQYRKILDELQQYDETILNRPQIVVPTKMDMPDSEENLAKFRKE 300 Query: 296 LATQCGQVPFE-----FSSITGHGIPQILECLHDKI 326 +AT G +P + SSIT G+ ++ D + Sbjct: 301 VATDSG-LPIQPEIVPISSITRDGVKDLMRLTADML 335 >gi|57233686|ref|YP_180757.1| GTPase ObgE [Dehalococcoides ethenogenes 195] gi|123619224|sp|Q3ZAJ2|OBG_DEHE1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|57224134|gb|AAW39191.1| GTP-binding protein, GTP1/OBG family [Dehalococcoides ethenogenes 195] Length = 424 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 139/338 (41%), Positives = 219/338 (64%), Gaps = 11/338 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 D ++ I+SGDGG+G +SFRREKF+ +GGPDGG GG GG+V+++A S L +L++F+++ Sbjct: 1 MFDRVEIRIKSGDGGSGKVSFRREKFVPYGGPDGGDGGDGGNVYLEADSGLYSLLNFKHK 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGT--QVFEEDGIS-LICDLDQEGQRIILAP 119 + KA +GE GM +G G D+V+ VPVGT + EE+G ++ DL +G R ++A Sbjct: 61 RVHKAANGENGMGSRCTGHNGADLVIKVPVGTVATIVEENGQKRVLADLAADGDRTLVAR 120 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG GN HF SSTNQAP A G G E + L+LKLIAD+ IIG PN GKS+ L+ + Sbjct: 121 GGQGGLGNTHFVSSTNQAPMLAQKGQPGGEYELILELKLIADVAIIGYPNVGKSSLLSLL 180 Query: 180 TRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 T AKP++A+YPFTTL P +G+V+ F++A++PG+I++AH G G+G FL+H RT + Sbjct: 181 TAAKPRVANYPFTTLSPVMGVVERTEGTFVMAEVPGLIEDAHLGRGLGHDFLRHISRTRM 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT- 298 ++H++ +N + EL Y++ L ++ ++V +++ID D L + + E T Sbjct: 241 VIHLLDGTSDNPIDDMIKVNSELYLYDASLSERPQVVAVNKID----DELVQLRREELTE 296 Query: 299 ---QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 + G F S++TG G+ +L+ + +K+ ++ + Sbjct: 297 TFKEAGLEVFFISALTGEGVEVLLDKVAEKLAILKAAD 334 >gi|257462380|ref|ZP_05626794.1| GTPase ObgE [Fusobacterium sp. D12] gi|317060045|ref|ZP_07924530.1| SPO0B-associated GTP-binding protein [Fusobacterium sp. D12] gi|313685721|gb|EFS22556.1| SPO0B-associated GTP-binding protein [Fusobacterium sp. D12] Length = 428 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 138/334 (41%), Positives = 211/334 (63%), Gaps = 4/334 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + +++G+GG G +FRREK ++FGGPDGG GG GG V+ A N+NTL+DF+Y+ Sbjct: 2 FIDEVVITVKAGNGGDGSAAFRREKSVQFGGPDGGDGGNGGSVFFYADPNVNTLVDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKAQHGE G K+ G GED+++ VPVGTQV + L+ D+ ++ + +L GG Sbjct: 62 KIFKAQHGENGQKKQMFGKSGEDLIIKVPVGTQVRDLQTGKLLLDMHEKKETRMLLKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN HFK+ST +AP A G G E + L+LKL+AD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGWGNVHFKTSTRKAPKIAEKGREGAELQVKLELKLLADVALVGYPSVGKSSFINRVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K+ Y FTTL P LG+V+ E K F++ADIPG+I+ AH+G G+GD+FL+H ER ++ Sbjct: 182 NSKVGSYHFTTLEPKLGVVRLEEGKSFVIADIPGLIEGAHEGVGLGDKFLRHIERCKMIY 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V E + A ++ I +ELS ++ +L KK +I+ +++D + K Sbjct: 242 HLVDVSEMEGRDAIADFEKINEELSKFSEKLAKKPQIILANKMDLLWDMEKYEKFKSYVE 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + G + S + G+ +IL D+I + E Sbjct: 302 EKGYEVYPVSVLLNEGLKEILYKTFDRIQKVERE 335 >gi|332877161|ref|ZP_08444911.1| Obg family GTPase CgtA [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684904|gb|EGJ57751.1| Obg family GTPase CgtA [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 392 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 144/328 (43%), Positives = 215/328 (65%), Gaps = 6/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RR K++ GGPDGG+GGRGG+V+++ N TL+ RY Sbjct: 6 FVDYVKIYCRSGKGGRGSAHMRRAKYVPNGGPDGGNGGRGGNVYLRGNRNYWTLLHLRYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HG G K SG GED + VP GT V+ + +CD+ ++GQ ++L GG Sbjct: 66 RHVFAGHGGNGSKARSSGKDGEDKYIDVPCGTVVYNAETGEYLCDVTEDGQVVLLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +F+++TNQAP YA PG QE ++ ++LKL+AD+G++G PNAGKST L++V+ A Sbjct: 126 GGLGNWNFRTATNQAPRYAQPGEPMQEMMVIMELKLLADVGLVGFPNAGKSTLLSAVSSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+YPFTTL P+LGIV + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 RPKIANYPFTTLEPSLGIVSYRDNQSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V E+++ Y+ +L+EL+ +N E+ K ++ +++ D +D + + L+ Sbjct: 246 FMVPGDTEDIRKEYEILLNELATFNPEMLDKQRVLAITKSDLLDEELIQM----LSENLP 301 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFS 328 VP F SS+TG GI ++ + L ++ S Sbjct: 302 DVPHVFISSVTGMGIAELKDVLWRELNS 329 >gi|299144206|ref|ZP_07037286.1| Obg family GTPase CgtA [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518691|gb|EFI42430.1| Obg family GTPase CgtA [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 421 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 139/324 (42%), Positives = 216/324 (66%), Gaps = 9/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A + +++G+GG G +++RREK+ GGP GG GG GG++ ++ S L+TL+DFRY+ Sbjct: 2 FIDIADIKLKAGNGGDGAVAWRREKYEPAGGPAGGDGGNGGNIILKTDSGLHTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA +GE GM + + G GED++L VPVGT V ++ +I DL + Q ++A GG Sbjct: 62 REYKAPNGENGMSKKKFGKNGEDIILKVPVGTLVKDKKTGGVIVDLKEVNQEYVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F +ST QAP +A G G+EK I L+LKL+AD+G++G PN GKST L+ V+ A Sbjct: 122 GGRGNAKFTTSTRQAPAFAQAGSKGEEKAITLELKLLADVGLVGFPNVGKSTLLSIVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTT+ PNLG+V G + F++ADIPG+I+ A +G G+GD FLKH ERT +L+ Sbjct: 182 KPKIANYHFTTIKPNLGVVSLGPEMSFVIADIPGLIEGASEGLGLGDEFLKHVERTKILI 241 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 H++ A + ++ Y+ I +EL YN +L K++I+ +++D + + L + K E Sbjct: 242 HVLDASGSEGRDPIEDFYK-INEELKNYNEKLSDKMQIIFANKMDVFPAEENLEKIKKEF 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILE 320 + + F S+ T + ++++ Sbjct: 301 GDKY--MIFYGSAATTENVDELMK 322 >gi|169335442|ref|ZP_02862635.1| hypothetical protein ANASTE_01856 [Anaerofustis stercorihominis DSM 17244] gi|169258180|gb|EDS72146.1| hypothetical protein ANASTE_01856 [Anaerofustis stercorihominis DSM 17244] Length = 427 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 146/327 (44%), Positives = 216/327 (66%), Gaps = 7/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ + ++SG GG G ++FRREK++ GGP GG GG+GG+V ++ S LNTL FRY+ Sbjct: 2 FVDKVSINVKSGKGGDGAVAFRREKYVPNGGPSGGDGGKGGNVIFKSNSALNTLEAFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A+ GE G + N SG G+D+++ VPVGT +F+ +LICD+ + Q I + GG Sbjct: 62 RKFAAEAGENGSRSNMSGKDGKDIIIEVPVGTVIFDSATGALICDMVVDNQEITVLNGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST Q+P +A PG +EK + L+LK IAD+G+IG PN GKST L+ VT A Sbjct: 122 GGRGNQHFATSTRQSPKFAKPGDEAEEKNLILELKTIADVGLIGFPNVGKSTILSMVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 PKIA+Y FTTL PNLGIVK + +EF+LADIPG+I+ A G G+G +FL+H ERT +L+ Sbjct: 182 TPKIANYHFTTLSPNLGIVKYKNSEEFVLADIPGLIEGASSGQGLGHQFLRHVERTRLLV 241 Query: 242 HIVSA--LE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ A +E + + + I +ELS Y +L+++ +I+ L++ D +D D +L T Sbjct: 242 HVLDASGVEGRDPKKDFDIINNELSLYAEKLKERPQIIVLNKTDLIDIDNKEEIIKDLTT 301 Query: 299 ---QCGQVPFEFSSITGHGIPQILECL 322 Q G F+ S+ G+ +I+ + Sbjct: 302 YFEQKGYKVFDSSAAMNDGLDKIMNYI 328 >gi|16079844|ref|NP_390670.1| GTPase ObgE [Bacillus subtilis subsp. subtilis str. 168] gi|221310731|ref|ZP_03592578.1| GTPase ObgE [Bacillus subtilis subsp. subtilis str. 168] gi|221315056|ref|ZP_03596861.1| GTPase ObgE [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319976|ref|ZP_03601270.1| GTPase ObgE [Bacillus subtilis subsp. subtilis str. JH642] gi|221324257|ref|ZP_03605551.1| GTPase ObgE [Bacillus subtilis subsp. subtilis str. SMY] gi|129021|sp|P20964|OBG_BACSU RecName: Full=GTPase obgE; AltName: Full=GTP-binding protein obg; AltName: Full=OrfA; AltName: Full=Spo0B-associated GTP-binding protein gi|508979|gb|AAA22505.1| GTP-binding protein [Bacillus subtilis] gi|2635257|emb|CAB14752.1| GTPase involved in cell partioning and DNA repair [Bacillus subtilis subsp. subtilis str. 168] gi|291485204|dbj|BAI86279.1| GTPase ObgE [Bacillus subtilis subsp. natto BEST195] Length = 428 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 144/322 (44%), Positives = 215/322 (66%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KVY++ GDGG G ++FRREK++ GGP GG GG+GGDV + L TL+DFRY+ Sbjct: 2 FVDQVKVYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGKGGDVVFEVDEGLRTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM +N+ G +D+V+ VP GT V ++D +I DL + GQR ++A GG Sbjct: 62 KHFKAIRGEHGMSKNQHGRNADDMVIKVPPGTVVTDDDTKQVIADLTEHGQRAVIARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP + G G+E+ I L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATPANPAPQLSENGEPGKERYIVLELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+V+ + + F++AD+PG+I+ AHQG G+G +FL+H ERT V++ Sbjct: 182 KPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLIEGAHQGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 H++ S LE + Y I ELS YN L ++ +I+ +++D + ++ L K +L Sbjct: 242 HVIDMSGLEGRDPYDDYLTINQELSEYNLRLTERPQIIVANKMDMPEAAENLEAFKEKLT 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 P S++T G+ ++L Sbjct: 302 DDYPVFP--ISAVTREGLRELL 321 >gi|28378716|ref|NP_785608.1| GTPase ObgE [Lactobacillus plantarum WCFS1] gi|308180908|ref|YP_003925036.1| obg family GTPase CgtA [Lactobacillus plantarum subsp. plantarum ST-III] gi|81840973|sp|Q88VG4|OBG_LACPL RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|28271553|emb|CAD64458.1| GTP-binding protein [Lactobacillus plantarum WCFS1] gi|308046399|gb|ADN98942.1| obg family GTPase CgtA [Lactobacillus plantarum subsp. plantarum ST-III] Length = 431 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 150/347 (43%), Positives = 221/347 (63%), Gaps = 14/347 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KV +++G+GG G ++FRREKF+ GGP GG GGRGG V +QA L TL+DFRY Sbjct: 2 FVDQVKVDVKAGNGGNGMVAFRREKFVPNGGPAGGDGGRGGSVVLQADEGLRTLMDFRYT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA G GM + +G +D ++ VP+GT V + + LI D+ + QR+++A GG Sbjct: 62 RKFKAAAGGNGMIKQMTGRSAKDTIIKVPLGTTVTDAETGELIGDIVNKDQRLVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S+ N AP A G G E I ++LK++AD+G++G P+ GKST L+ VT A Sbjct: 122 GGRGNIHFASAKNPAPEIAENGEPGDELTIRMELKVLADVGLVGFPSVGKSTLLSVVTSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V+ + ++F++AD+PG+I+ A G G+G +FL+H ERT V+L Sbjct: 182 KPKIAAYHFTTLVPNLGMVRLDDGRDFVMADLPGLIEGAANGVGLGIQFLRHIERTRVIL 241 Query: 242 HIV--SALEENVQ-AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT-LARKKNELA 297 H++ S +EEN Y I EL++Y+ +L K+ +IV +++D D++ L K +LA Sbjct: 242 HLIDMSGVEENDPFEDYHKINHELTSYDPDLLKRPQIVVATKMDMPDAEANLEDFKAKLA 301 Query: 298 TQ--CGQVP--FEFSSITGHGIPQILECLHDKI-----FSIRGENEF 335 T P + SSIT G+ +L D + F I+G ++ Sbjct: 302 TDDTLPNTPAVYPVSSITQQGLKALLAKTADLLDTTPQFPIKGVDDL 348 >gi|313888410|ref|ZP_07822078.1| Obg family GTPase CgtA [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845607|gb|EFR33000.1| Obg family GTPase CgtA [Peptoniphilus harei ACS-146-V-Sch2b] Length = 422 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 138/287 (48%), Positives = 199/287 (69%), Gaps = 8/287 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+ +++G GG G +++RREKF GGP GG GGRGG+V + S L+TL+DFRY+ Sbjct: 2 FIDIAKIKLKAGKGGDGAVAWRREKFEPAGGPAGGDGGRGGNVIVMTDSGLHTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA++G+ GM + + G GED+VL VPVGT + + +I DL + + + GG Sbjct: 62 REYKAENGQNGMSKLKFGKDGEDIVLKVPVGTLIRDASTNGVIYDLKENDMAVTVCKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA FK+ST QAP +A G +G+E+ I L+LKL+AD+G++G PN GKST L+ VT A Sbjct: 122 GGMGNARFKTSTRQAPAFAQAGNMGEEREIILELKLLADVGLVGFPNVGKSTLLSIVTSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 PKIA+Y FTTL PNLG+VK EG + F++ADIPG+I+ A +G G+GD FLKH ERT +L Sbjct: 182 TPKIANYHFTTLSPNLGVVKIDEG-ESFVIADIPGLIEGASEGIGLGDEFLKHVERTGIL 240 Query: 241 LHIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT 283 +H++ S + V+ Y+ I +EL YN +L +K +I+ ++ D Sbjct: 241 IHVLDVSGSEYRDPVEDFYK-INEELVRYNEKLGEKKQIIFANKTDV 286 >gi|300768234|ref|ZP_07078139.1| obg family GTPase CgtA [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494298|gb|EFK29461.1| obg family GTPase CgtA [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 467 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 150/347 (43%), Positives = 221/347 (63%), Gaps = 14/347 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KV +++G+GG G ++FRREKF+ GGP GG GGRGG V +QA L TL+DFRY Sbjct: 38 FVDQVKVDVKAGNGGNGMVAFRREKFVPNGGPAGGDGGRGGSVVLQADEGLRTLMDFRYT 97 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA G GM + +G +D ++ VP+GT V + + LI D+ + QR+++A GG Sbjct: 98 RKFKAAAGGNGMIKQMTGRSAKDTIIKVPLGTTVTDAETGELIGDIVNKDQRLVVAKGGR 157 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S+ N AP A G G E I ++LK++AD+G++G P+ GKST L+ VT A Sbjct: 158 GGRGNIHFASAKNPAPEIAENGEPGDELTIRMELKVLADVGLVGFPSVGKSTLLSVVTSA 217 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V+ + ++F++AD+PG+I+ A G G+G +FL+H ERT V+L Sbjct: 218 KPKIAAYHFTTLVPNLGMVRLDDGRDFVMADLPGLIEGAANGVGLGIQFLRHIERTRVIL 277 Query: 242 HIV--SALEENVQ-AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKKNELA 297 H++ S +EEN Y I EL++Y+ +L K+ +IV +++D D++ L K +LA Sbjct: 278 HLIDMSGVEENDPFEDYHKINHELTSYDPDLLKRPQIVVATKMDMPDAEANLEDFKAKLA 337 Query: 298 TQ--CGQVP--FEFSSITGHGIPQILECLHDKI-----FSIRGENEF 335 T P + SSIT G+ +L D + F I+G ++ Sbjct: 338 TDDTLPNTPAVYPVSSITQQGLKALLAKTADLLDTTPQFPIKGVDDL 384 >gi|257452542|ref|ZP_05617841.1| GTPase ObgE [Fusobacterium sp. 3_1_5R] gi|257466405|ref|ZP_05630716.1| GTPase ObgE [Fusobacterium gonidiaformans ATCC 25563] gi|315917561|ref|ZP_07913801.1| SPO0B-associated GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563] gi|317059082|ref|ZP_07923567.1| SPO0B-associated GTP-binding protein [Fusobacterium sp. 3_1_5R] gi|313684758|gb|EFS21593.1| SPO0B-associated GTP-binding protein [Fusobacterium sp. 3_1_5R] gi|313691436|gb|EFS28271.1| SPO0B-associated GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563] Length = 428 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 137/334 (41%), Positives = 211/334 (63%), Gaps = 4/334 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + +++G+GG G +FRREK ++FGGPDGG GG GG ++ A N+NTL+DF+Y+ Sbjct: 2 FIDEVVITVKAGNGGDGSAAFRREKSVQFGGPDGGDGGNGGSIFFYADPNVNTLVDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKAQHGE G K+ G GED+++ VPVGTQV + L+ D++++ + +L GG Sbjct: 62 KIFKAQHGENGQKKQMFGKAGEDLIIKVPVGTQVRDLQTGKLLLDMNEKNETRMLLKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN HFK+ST +AP A G G E + L+LKLIAD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGWGNVHFKTSTRKAPKIAEKGREGAELQVKLELKLIADVALVGYPSVGKSSFINRVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K+ Y FTTL P LG+V+ E K F++ADIPG+I+ AH+G G+GD+FL+H ER ++ Sbjct: 182 NSKVGSYHFTTLEPKLGVVRLEEGKSFVIADIPGLIEGAHEGVGLGDKFLRHIERCKMIY 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V E + + ++ I +ELS ++ +L KK ++V +++D + Sbjct: 242 HLVDVAEIEGRDAISDFEKINEELSKFSEKLAKKPQVVLANKMDLLWDMEKYETFKSYVE 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + G + S + G+ +IL DKI + E Sbjct: 302 EKGYEVYPVSVLLNEGLKEILYKTFDKIQKVERE 335 >gi|37528359|ref|NP_931704.1| GTPase ObgE [Photorhabdus luminescens subsp. laumondii TTO1] gi|81833859|sp|Q7MYX6|OBG_PHOLL RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|36787797|emb|CAE16912.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 391 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 138/306 (45%), Positives = 212/306 (69%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEARILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+D + VPVGT+V + ++ D+ + QR+++A G Sbjct: 61 FEKSFRAERGQNGQSRDCTGRRGQDTTIKVPVGTRVRDAVTGEVLGDMIRHEQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQRTMGTSGETRELMLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+IK A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEQSFVVADIPGLIKGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + V+ A + I++EL Y+ +L +K + +++D ++ + ++ Sbjct: 241 LLHLIDICPVDGSDPVENA-RIIVNELQQYSEKLAEKPRRLVFNKVDLLEPEEARQRAQA 299 Query: 296 LATQCG 301 +A + G Sbjct: 300 IADELG 305 >gi|33591923|ref|NP_879567.1| GTPase ObgE [Bordetella pertussis Tohama I] gi|33595023|ref|NP_882666.1| GTPase ObgE [Bordetella parapertussis 12822] gi|33599301|ref|NP_886861.1| GTPase ObgE [Bordetella bronchiseptica RB50] gi|81578849|sp|Q7VZX6|OBG_BORPE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|81578928|sp|Q7W1P2|OBG_BORPA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|81580307|sp|Q7WQL8|OBG_BORBR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|33565099|emb|CAE40050.1| probable GTP-binding protein [Bordetella parapertussis] gi|33571567|emb|CAE41053.1| probable GTP-binding protein [Bordetella pertussis Tohama I] gi|33575347|emb|CAE30810.1| probable GTP-binding protein [Bordetella bronchiseptica RB50] gi|332381340|gb|AEE66187.1| GTPase ObgE [Bordetella pertussis CS] Length = 377 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 151/336 (44%), Positives = 216/336 (64%), Gaps = 11/336 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G SFRREKFI GGPDGG GGRGG ++ A N+NTLIDFR Sbjct: 1 MKFVDEATIEVIAGKGGNGVASFRREKFIPKGGPDGGDGGRGGSIYAVADRNINTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A++GE G ++ GA D+ L VPVGT V + D ++ DLD+ Q++ LA G Sbjct: 61 YARLHRAKNGENGRGSDQYGAAAPDITLRVPVGTVVHDADTGEVLFDLDRHDQKVTLAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP PG G+++ + ++LK++AD+G++GLPNAGKST ++ ++ Sbjct: 121 GAGGMGNIHFKSSTNRAPRQWTPGKEGEQRRLRMELKVLADVGLLGLPNAGKSTLISRIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG+G FL+H RT V Sbjct: 181 NARPKIADYPFTTLHPNLGVVRTSPSRSFVVADIPGLIEGASEGAGLGHLFLRHLARTRV 240 Query: 240 LLHIV---------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLA 290 LLH+V +E+ V A I++EL Y+ EL K + L+++D V A Sbjct: 241 LLHLVDISSPDPEADPIEQAVVDA-NAIVEELRRYDPELAAKPRWLVLNKLDMVPDAQDA 299 Query: 291 RKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ F S + G G ++ L D + Sbjct: 300 QQRFCAEFGWTGPVFAISGLNGEGTQDLIWALQDYL 335 >gi|260436007|ref|ZP_05789977.1| Obg family GTPase CgtA [Synechococcus sp. WH 8109] gi|260413881|gb|EEX07177.1| Obg family GTPase CgtA [Synechococcus sp. WH 8109] Length = 329 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 139/320 (43%), Positives = 203/320 (63%), Gaps = 1/320 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ +R G GG G +FRREK++ GGP GG GG G V ++A SNL TL+DF+ Sbjct: 1 MQFIDQARITVRGGRGGDGIAAFRREKYVPAGGPSGGDGGCGAPVVLEADSNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F A G +G +GA G+D+V+ VP GT+V L+ DL G R+ +A G Sbjct: 61 YKRLFAADDGRRGGPNKCTGASGKDLVIKVPCGTEVRHLRTGILLGDLTTPGDRLTVAFG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S+ N+AP G G+E + L+LKL+A++GIIGLPNAGKST +A ++ Sbjct: 121 GRGGLGNAHYLSNRNRAPEKFTEGREGEEWPLQLELKLLAEVGIIGLPNAGKSTLIAVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ + + ADIPG+I+ A QGAG+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRRPSGDGTVFADIPGLIEGAAQGAGLGHDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V A E+ A + EL AY L + ++ +++ + V + L + +L Sbjct: 241 LIHLVDAGSEDPVADLNVVQQELEAYGHGLVDRPRLLVINKQELVTEEDLPTLRQDLEAA 300 Query: 300 CGQVPFEFSSITGHGIPQIL 319 G+ S+ G + Q+L Sbjct: 301 SGRPVLCISAAMGTNLDQLL 320 >gi|257064006|ref|YP_003143678.1| GTP-binding protein Obg/CgtA [Slackia heliotrinireducens DSM 20476] gi|256791659|gb|ACV22329.1| GTP-binding protein Obg/CgtA [Slackia heliotrinireducens DSM 20476] Length = 463 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 144/353 (40%), Positives = 216/353 (61%), Gaps = 26/353 (7%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+ +Y++ GDGGAG +SFRRE + GGPDGG GG GG+V ++A ++++LI++RY+ Sbjct: 2 FTDKVHIYLKGGDGGAGCMSFRREAHVPKGGPDGGDGGHGGNVILKADGSVSSLIEYRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE------EDGISLICDLDQEGQRII 116 HFKA+ G G GA+GED+VL VP+GT V E E G LI DL EG++++ Sbjct: 62 HHFKAERGTHGKGSRMHGARGEDLVLKVPIGTVVREYNEETKETG-ELIADLTHEGEQVV 120 Query: 117 LAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFL 176 +A GG GG GN HF +ST +AP +A G +E + L++KL+AD ++G+P+ GKS+ + Sbjct: 121 VAEGGMGGRGNIHFVTSTRRAPTFAELGEPAKEMWVELEMKLMADAALVGMPSVGKSSII 180 Query: 177 ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTER 236 A ++ A+PKIADYPFTTL PNLG+V+ +F++AD+PG+I+ AH+G G+G FL+H ER Sbjct: 181 ARISAARPKIADYPFTTLVPNLGVVRGDEYDFVVADVPGLIEGAHEGKGLGHEFLRHIER 240 Query: 237 THVLLHIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID---------- 282 T +++H++ S + Y I EL Y EL + IV ++ D Sbjct: 241 TAIIVHVIDMTGSYEGRDPVEDYHIINRELELYAKELADRPRIVVANKCDMPGIEGKLRE 300 Query: 283 ---TVDSDTL-ARKKNELATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 V D + A NE A + + S++TG GI +++ L K+ +R Sbjct: 301 LEAAVREDAIKAAGGNEYADSVAEAKVYRVSALTGMGIDSMVDALGSKVHELR 353 >gi|299535643|ref|ZP_07048964.1| GTPase ObgE [Lysinibacillus fusiformis ZC1] gi|298728843|gb|EFI69397.1| GTPase ObgE [Lysinibacillus fusiformis ZC1] Length = 429 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 136/329 (41%), Positives = 210/329 (63%), Gaps = 11/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y++ GDGG G ++FRREK++ GGP GG GG GG+V + L TL+DFRY+ Sbjct: 2 FVDHVKIYVKGGDGGDGMVAFRREKYVPNGGPAGGDGGHGGNVVFEVEEGLRTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM + G ED+++ VP GT V E+ ++I DL + GQR ++A G Sbjct: 62 RHFKAPRGEHGMSKGMHGKNAEDLIVKVPPGTVVMNEETNAVIADLVEHGQRAVIAKAGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP + G GQE + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATPANPAPELSEKGEPGQELNVILELKVLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+++ + ++ F +AD+PG+I+ AHQG G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIVPNLGMIETDDHRSFAMADLPGLIEGAHQGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD---TLARKKNE 295 H++ S +E + Y I +EL YN L ++ +I+ +++D D++ T R+K Sbjct: 242 HVIDMSGMEGRDPYEDYLTINEELKQYNLRLTERPQIIVANKMDMPDAEENLTAFRQKVG 301 Query: 296 LATQCGQVPFEFSSITGHGIPQILECLHD 324 Q F S+++ G+ ++L + D Sbjct: 302 EDVQI----FPISAVSRQGLKELLFAIAD 326 >gi|227540232|ref|ZP_03970281.1| GTP-binding protein [Sphingobacterium spiritivorum ATCC 33300] gi|227239876|gb|EEI89891.1| GTP-binding protein [Sphingobacterium spiritivorum ATCC 33300] Length = 332 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 147/330 (44%), Positives = 211/330 (63%), Gaps = 8/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D KV RSG GGAG R+K GGPDGG GGRGG + ++ TS L TL+ +Y+ Sbjct: 7 FVDYVKVCCRSGHGGAGSAHLHRDKHTAKGGPDGGDGGRGGHIILKGTSQLWTLLHLKYR 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A +G+ G RSGA G+D +L VP+GT + + ++ D+ ++G+ IL GG Sbjct: 67 KHIIASNGDPGGSALRSGANGKDEILEVPLGTIARDAETGEVLFDITEDGETKILTAGGI 126 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKS+T Q P ++ PG G E+ + L+LK++AD+G++G PNAGKST L+ V+ A Sbjct: 127 GGLGNWHFKSATQQTPRFSQPGRPGIEQWVILELKVLADVGLVGFPNAGKSTLLSVVSAA 186 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+YPFTTL PNLGIV K F++ADIPGII+ A +G G+G RFL+H ER VLL Sbjct: 187 KPEIANYPFTTLVPNLGIVSYRDNKSFVMADIPGIIEGASEGKGLGYRFLRHIERNSVLL 246 Query: 242 HIVSA-LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +V A + + Y +L EL+AYN EL K +++ +++ D +D + +NE+ Q Sbjct: 247 FMVPADTDRTIAEEYHILLKELTAYNPELMDKPKLLAITKSDMLDEEL----ENEMKAQV 302 Query: 301 -GQVPFEF-SSITGHGIPQILECLHDKIFS 328 +P+ F SSI+G Q+ + + I S Sbjct: 303 PDDIPYIFISSISGKNXLQLKDMIWKAINS 332 >gi|153811299|ref|ZP_01963967.1| hypothetical protein RUMOBE_01691 [Ruminococcus obeum ATCC 29174] gi|149832426|gb|EDM87510.1| hypothetical protein RUMOBE_01691 [Ruminococcus obeum ATCC 29174] Length = 430 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 146/337 (43%), Positives = 211/337 (62%), Gaps = 8/337 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+ IRSG GG G +SFRRE ++ GGPDGG GGRGGDV + NTL ++R++ Sbjct: 2 FADRAKIIIRSGKGGDGHVSFRRELYVPNGGPDGGDGGRGGDVIFEVDEGQNTLGEYRHK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 FKAQ G++G K+ GA G+D+VL VP GT + E +I D+ E +R I+ GG Sbjct: 62 HKFKAQDGQEGGKKRCHGADGDDIVLKVPEGTVIMEAQSRKVIADMSGENRRQIVLKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+ + T Q P +A PG QE + L+LK+IAD+G++G PN GKSTFL+ VT A Sbjct: 122 GGKGNQHYATPTMQVPKFAQPGQPAQELEVLLELKVIADVGLVGFPNVGKSTFLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIA+Y FTTL PNLG+V F++ADIPG+I+ A +G G+G FL+H ERT VL+H Sbjct: 182 QPKIANYHFTTLSPNLGVVDTANGGFVIADIPGLIEGASEGIGLGHEFLRHIERTRVLVH 241 Query: 243 IVSALEENVQAAY---QCILDELSAYNSELRKKIEIVGLSQIDTV----DSDTLARKKNE 295 IV A + I EL AYN ++ + +++ ++ID + + + + R K E Sbjct: 242 IVDAASTEGRDPVDDIHKINKELEAYNPDIAARPQLIAANKIDCIFDDGEENPIDRLKAE 301 Query: 296 LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + +V + S++TG G+ ++L + + + S+ E Sbjct: 302 FEPKGIKV-YPISAVTGQGLKELLYGIKELLDSVPAE 337 >gi|217964316|ref|YP_002349994.1| Spo0B-associated GTP-binding protein [Listeria monocytogenes HCC23] gi|261266852|sp|B8DHL1|OBG_LISMH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|217333586|gb|ACK39380.1| Spo0B-associated GTP-binding protein [Listeria monocytogenes HCC23] gi|307571118|emb|CAR84297.1| GTP-binding protein, GTP1/OBG family [Listeria monocytogenes L99] Length = 429 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 140/330 (42%), Positives = 213/330 (64%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y+++G+GG G ++FRREKF+ GGP GG GG+G DV L TL+DFR++ Sbjct: 2 FVDQVKIYVKAGNGGDGMVAFRREKFVPNGGPAGGDGGKGADVVFVVDEGLRTLVDFRFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+HGE GM ++ G ED+V+ VP GT V + D +I DL GQR ++A G Sbjct: 62 RIFKAEHGEHGMSKSMHGRGAEDLVVKVPQGTIVKDIDTGEIIADLVAHGQRAVIAKAGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNKRFATPANPAPELSENGEPGQERNVQLELKVLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA Y FTT+ PNLG+V G + F++AD+PG+I+ A QG G+G +FL+H ERT V++ Sbjct: 182 RPKIAAYHFTTIVPNLGMVDAGDGRSFVMADLPGLIEGASQGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALEENVQ-AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ S E V Y I +EL YN L ++ +I+ +++D D++ NE T Sbjct: 242 HVIDMSGSEGRVPYEDYMAINNELEQYNLRLMERPQIIVANKMDMPDAE---ENLNEFKT 298 Query: 299 QCGQ-VP-FEFSSITGHGIPQILECLHDKI 326 + + +P F S++T G+ ++L + DK+ Sbjct: 299 KIAEDIPVFPISAVTKTGLRELLLAIADKL 328 >gi|116751059|ref|YP_847746.1| small GTP-binding protein [Syntrophobacter fumaroxidans MPOB] gi|261277760|sp|A0LPF9|OBG_SYNFM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|116700123|gb|ABK19311.1| small GTP-binding protein [Syntrophobacter fumaroxidans MPOB] Length = 348 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 151/326 (46%), Positives = 209/326 (64%), Gaps = 4/326 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE KV++ SG+GG G +SFRREK++ GGPDGG GG GG V A+ NTL+DFR Sbjct: 1 MKFVDEVKVHVLSGNGGNGCVSFRREKYVPRGGPDGGDGGEGGSVIFVASEGKNTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+ FKA+ G+ G RNR G G D+VL VP GT + + + + DL G R + A G Sbjct: 61 YRHLFKAESGKHGQGRNRHGKGGRDLVLEVPAGTVIKDAETGEPLVDLSHPGDRWVAARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F SST QAP A G G+++ + L+LKL+AD+G++GLPNAGKST ++ V+ Sbjct: 121 GRGGRGNARFVSSTRQAPRIAEDGREGEDRELVLELKLMADVGLVGLPNAGKSTLISVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P+IADYPFTTL P LG+V+ G F++ADIPG+I+ AH GAG+G RFL+H ERT + Sbjct: 181 AARPRIADYPFTTLIPCLGVVRHGEAPPFVMADIPGLIEGAHDGAGLGIRFLRHIERTRI 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L H+V + E Y+ I EL++Y++ L +K ++ L+++D V Sbjct: 241 LAHLVDISQLSPEEPLRPYRLIESELASYSARLGEKKRVIVLNKVDLVPERDRLEALVSR 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECL 322 Q G F S+ T G+ ++L L Sbjct: 301 YEQLGHPVFPVSARTKEGLGELLSAL 326 >gi|16803577|ref|NP_465062.1| GTPase ObgE [Listeria monocytogenes EGD-e] gi|46907765|ref|YP_014154.1| GTPase ObgE [Listeria monocytogenes serotype 4b str. F2365] gi|47094261|ref|ZP_00231970.1| GTP-binding protein, GTP1/OBG family [Listeria monocytogenes str. 4b H7858] gi|47097677|ref|ZP_00235191.1| GTP-binding protein, GTP1/OBG family [Listeria monocytogenes str. 1/2a F6854] gi|224499802|ref|ZP_03668151.1| GTPase ObgE [Listeria monocytogenes Finland 1988] gi|224501523|ref|ZP_03669830.1| GTPase ObgE [Listeria monocytogenes FSL R2-561] gi|226224138|ref|YP_002758245.1| hypothetical protein Lm4b_01547 [Listeria monocytogenes Clip81459] gi|254824404|ref|ZP_05229405.1| GTPase ObgE [Listeria monocytogenes FSL J1-194] gi|254828229|ref|ZP_05232916.1| GTPase ObgE [Listeria monocytogenes FSL N3-165] gi|254829704|ref|ZP_05234359.1| GTPase ObgE [Listeria monocytogenes 10403S] gi|254852161|ref|ZP_05241509.1| GTPase ObgE [Listeria monocytogenes FSL R2-503] gi|254898297|ref|ZP_05258221.1| GTPase ObgE [Listeria monocytogenes J0161] gi|254912211|ref|ZP_05262223.1| GTPase ObgE [Listeria monocytogenes J2818] gi|254931472|ref|ZP_05264831.1| GTPase ObgE [Listeria monocytogenes HPB2262] gi|254936539|ref|ZP_05268236.1| GTPase ObgE [Listeria monocytogenes F6900] gi|254992893|ref|ZP_05275083.1| GTPase ObgE [Listeria monocytogenes FSL J2-064] gi|255522334|ref|ZP_05389571.1| GTPase ObgE [Listeria monocytogenes FSL J1-175] gi|284801927|ref|YP_003413792.1| GTPase ObgE [Listeria monocytogenes 08-5578] gi|284995069|ref|YP_003416837.1| GTPase ObgE [Listeria monocytogenes 08-5923] gi|290893939|ref|ZP_06556915.1| GTPase ObgE [Listeria monocytogenes FSL J2-071] gi|300764796|ref|ZP_07074786.1| GTP1/OBG family GTP-binding protein [Listeria monocytogenes FSL N1-017] gi|81830212|sp|Q71ZD3|OBG_LISMF RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|81849839|sp|Q8Y6Z3|OBG_LISMO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|16410966|emb|CAC99615.1| lmo1537 [Listeria monocytogenes EGD-e] gi|46881034|gb|AAT04331.1| GTP-binding protein, GTP1/OBG family [Listeria monocytogenes serotype 4b str. F2365] gi|47013947|gb|EAL04966.1| GTP-binding protein, GTP1/OBG family [Listeria monocytogenes str. 1/2a F6854] gi|47017367|gb|EAL08191.1| GTP-binding protein, GTP1/OBG family [Listeria monocytogenes str. 4b H7858] gi|225876600|emb|CAS05309.1| Hypothetical protein of unknown function [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258600617|gb|EEW13942.1| GTPase ObgE [Listeria monocytogenes FSL N3-165] gi|258605464|gb|EEW18072.1| GTPase ObgE [Listeria monocytogenes FSL R2-503] gi|258609133|gb|EEW21741.1| GTPase ObgE [Listeria monocytogenes F6900] gi|284057489|gb|ADB68430.1| GTPase ObgE [Listeria monocytogenes 08-5578] gi|284060536|gb|ADB71475.1| GTPase ObgE [Listeria monocytogenes 08-5923] gi|290556477|gb|EFD90015.1| GTPase ObgE [Listeria monocytogenes FSL J2-071] gi|293583024|gb|EFF95056.1| GTPase ObgE [Listeria monocytogenes HPB2262] gi|293590184|gb|EFF98518.1| GTPase ObgE [Listeria monocytogenes J2818] gi|293593639|gb|EFG01400.1| GTPase ObgE [Listeria monocytogenes FSL J1-194] gi|300514472|gb|EFK41529.1| GTP1/OBG family GTP-binding protein [Listeria monocytogenes FSL N1-017] gi|328465573|gb|EGF36802.1| GTPase CgtA [Listeria monocytogenes 1816] gi|328474897|gb|EGF45697.1| GTPase CgtA [Listeria monocytogenes 220] gi|332311979|gb|EGJ25074.1| GTPase obg [Listeria monocytogenes str. Scott A] Length = 429 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 140/330 (42%), Positives = 213/330 (64%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y+++G+GG G ++FRREKF+ GGP GG GG+G DV L TL+DFR++ Sbjct: 2 FVDQVKIYVKAGNGGDGMVAFRREKFVPNGGPAGGDGGKGADVVFVVDEGLRTLVDFRFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+HGE GM ++ G ED+V+ VP GT V + D +I DL GQR ++A G Sbjct: 62 RIFKAEHGEHGMSKSMHGRGAEDLVVKVPQGTIVKDIDTGEIIADLVAHGQRAVIAKAGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNKRFATPANPAPELSENGEPGQERNVQLELKVLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA Y FTT+ PNLG+V G + F++AD+PG+I+ A QG G+G +FL+H ERT V++ Sbjct: 182 RPKIAAYHFTTIVPNLGMVDAGDGRSFVMADLPGLIEGASQGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALEENVQ-AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ S E V Y I +EL YN L ++ +I+ +++D D++ NE T Sbjct: 242 HVIDMSGSEGRVPYEDYMAINNELEQYNLRLMERPQIIVANKMDMPDAE---ENLNEFKT 298 Query: 299 QCGQ-VP-FEFSSITGHGIPQILECLHDKI 326 + + +P F S++T G+ ++L + DK+ Sbjct: 299 KIAEDIPVFPISAVTKTGLRELLLAIADKL 328 >gi|254556918|ref|YP_003063335.1| GTPase ObgE [Lactobacillus plantarum JDM1] gi|254045845|gb|ACT62638.1| GTPase ObgE [Lactobacillus plantarum JDM1] Length = 431 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 150/347 (43%), Positives = 221/347 (63%), Gaps = 14/347 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KV +++G+GG G ++FRREKF+ GGP GG GGRGG V +QA L TL+DFRY Sbjct: 2 FVDQVKVDVKAGNGGNGMVAFRREKFVPNGGPAGGDGGRGGSVVLQADEGLRTLMDFRYT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA G GM + +G +D ++ VP+GT V + + LI D+ + QR+++A GG Sbjct: 62 RKFKAAAGGNGMIKQMTGRSAKDTIIKVPLGTTVTDAETGELIGDIVNKDQRLVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S+ N AP A G G E I ++LK++AD+G++G P+ GKST L+ VT A Sbjct: 122 GGRGNIHFASAKNPAPEIAENGEPGDELTIRMELKVLADVGLVGFPSVGKSTLLSVVTSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V+ + ++F++AD+PG+I+ A G G+G +FL+H ERT V+L Sbjct: 182 KPKIAAYHFTTLVPNLGMVRLDDGRDFVMADLPGLIEGAANGVGLGIQFLRHIERTRVIL 241 Query: 242 HIV--SALEENVQ-AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKKNELA 297 H++ S +EEN Y I EL++Y+ +L K+ +IV +++D D++ L K +LA Sbjct: 242 HLIDMSGVEENDPFEDYHKINHELTSYDPDLLKRPQIVVATKMDMPDAEANLEDFKVKLA 301 Query: 298 TQ--CGQVP--FEFSSITGHGIPQILECLHDKI-----FSIRGENEF 335 T P + SSIT G+ +L D + F I+G ++ Sbjct: 302 TDDTLPNTPAVYPVSSITQQGLKALLAKTADLLDTTPQFPIKGVDDL 348 >gi|73747958|ref|YP_307197.1| GTPase ObgE [Dehalococcoides sp. CBDB1] gi|147668654|ref|YP_001213472.1| GTPase ObgE [Dehalococcoides sp. BAV1] gi|289431957|ref|YP_003461830.1| GTP-binding protein Obg/CgtA [Dehalococcoides sp. GT] gi|123619344|sp|Q3ZW89|OBG_DEHSC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266815|sp|A5FP49|OBG_DEHSB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|73659674|emb|CAI82281.1| spo0b-associated GTP-binding protein [Dehalococcoides sp. CBDB1] gi|146269602|gb|ABQ16594.1| small GTP-binding protein [Dehalococcoides sp. BAV1] gi|288945677|gb|ADC73374.1| GTP-binding protein Obg/CgtA [Dehalococcoides sp. GT] Length = 424 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 137/327 (41%), Positives = 211/327 (64%), Gaps = 3/327 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 D ++ I++GDGG+G +SFRREKF+ +GGPDGG GG GG+V+++A S L +L++F+++ Sbjct: 1 MFDRVEINIKAGDGGSGKVSFRREKFVPYGGPDGGDGGDGGNVYLEADSGLYSLLNFKHK 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGT--QVFEEDGIS-LICDLDQEGQRIILAP 119 + KA +GE GM +G G D+V+ VPVGT + EE+G ++ DL +G R ++A Sbjct: 61 RVHKASNGEGGMGSRCTGHNGADLVIKVPVGTVATILEENGQKRVLADLAADGDRTLVAH 120 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG GN HF SSTNQAP A G G E + L+LKLIAD+ IIG PN GKS+ L+ + Sbjct: 121 GGQGGLGNTHFVSSTNQAPMLAQKGQPGGEYDLILELKLIADVAIIGYPNVGKSSLLSLL 180 Query: 180 TRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 T AKPK+A+YPFTTL P +G+++ F++A++PG+I+NAH G G+G FL+H RT + Sbjct: 181 TAAKPKVANYPFTTLSPVMGVIERPEGVFVMAEVPGLIENAHLGKGLGHDFLRHISRTRM 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 ++H++ EN + EL Y++ L ++ ++V +++ID + E + Sbjct: 241 VIHLLDGTSENPIDDMIKVNSELYLYDASLSERPQVVAINKIDDELVQLRREELKETFKE 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKI 326 G F S++TG G+ +L + +K+ Sbjct: 301 AGLEVFFISALTGEGVDVLLAKVAEKL 327 >gi|167998164|ref|XP_001751788.1| predicted protein [Physcomitrella patens subsp. patens] gi|162696886|gb|EDQ83223.1| predicted protein [Physcomitrella patens subsp. patens] Length = 454 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 144/321 (44%), Positives = 207/321 (64%), Gaps = 7/321 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+ D AK+Y+++GDGG G ++FRREK++ FGGP GGSGGRGGD++I+A + +N+L+ FR Sbjct: 1 MRCFDRAKIYVKAGDGGNGVVAFRREKYVPFGGPSGGSGGRGGDIYIEADTAMNSLLPFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDG------ISLICDLDQEGQR 114 Q HF+A G G +R GA G D V+ VPVGT + +G ++ +L + GQ+ Sbjct: 61 KQVHFRADRGAHGKGSSREGANGPDCVVKVPVGTVIRAAEGQDVGSEREILLELTKPGQK 120 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 +L PGG GG GNA FK+ N+AP A G +G E I L+LKL+AD+GI+G+PNAGKST Sbjct: 121 ELLLPGGRGGRGNAAFKTGRNKAPQLAEYGEVGAEMWIELELKLVADVGIVGVPNAGKST 180 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKH 233 L++++ AKP +A+YPFTTL PNLG+V GY ++AD+PG+++ AHQG G+G FL+H Sbjct: 181 LLSAISAAKPTVANYPFTTLLPNLGVVPIGYDASMVVADLPGLLEGAHQGIGLGHEFLRH 240 Query: 234 TERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 TER VL+ +V Y+ I EL +N EL +K +V +++DT ++ Sbjct: 241 TERCSVLVQVVDGTCTQAFEEYEAIRLELQLFNPELAEKPFVVAYNKMDTQEAVDQWPSF 300 Query: 294 NELATQCGQVPFEFSSITGHG 314 E + G F S+ T G Sbjct: 301 QESLEKQGIKAFPMSAATQEG 321 >gi|325298966|ref|YP_004258883.1| GTPase obg [Bacteroides salanitronis DSM 18170] gi|324318519|gb|ADY36410.1| GTPase obg [Bacteroides salanitronis DSM 18170] Length = 392 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 143/323 (44%), Positives = 209/323 (64%), Gaps = 7/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK++ GGPDGG GGRGG V ++ N TL+ +Y+ Sbjct: 6 FVDYVKIYCRSGKGGRGSAHLRREKYMPNGGPDGGDGGRGGHVILRGNRNYWTLLHLKYE 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G K G G D ++ VP GT + + +CD+ + GQ ++L GG Sbjct: 66 RHVFAEHGGNGSKSRSFGKDGADKIIEVPCGTVAYNAETGEYVCDITEHGQEVVLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF++ T QAP +A PG QE ++ L+LKL+AD+G++G PNAGKST L++++ A Sbjct: 126 GGLGNWHFRTPTRQAPRFAQPGEPMQEMMVILELKLLADVGLVGFPNAGKSTLLSTISAA 185 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PKIADYPFTTL PNLGIV ++G K F++ADIPGII+ A +G G+G RFL+H ER +L Sbjct: 186 RPKIADYPFTTLEPNLGIVSYRDG-KSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLL 244 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L +V ++++ Y +L+EL+ +N E+ K ++ +++ D +D + + K L Sbjct: 245 LFMVPGDADDIRHEYDVLLNELAKFNPEMLDKQRVLAVTKCDVLDEELMEMLKPTLPE-- 302 Query: 301 GQVPFEF-SSITGHGIPQILECL 322 VP F SS+TG GI ++ + L Sbjct: 303 -NVPHVFISSVTGMGIQELKDIL 324 >gi|227432500|ref|ZP_03914485.1| GTP-binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351727|gb|EEJ41968.1| GTP-binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 439 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 139/336 (41%), Positives = 217/336 (64%), Gaps = 11/336 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D+A++ +++G GG G +SFR EKF+ GGP GG GG GG + + + TL+DFR Sbjct: 1 MAFVDQAQIEVKAGKGGDGIVSFRHEKFVAMGGPFGGDGGHGGSIIFKVDEGMRTLMDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HFKAQ G G + +GA ++ V+ VP GT V + D ++ D+ + GQ +++A G Sbjct: 61 YNRHFKAQPGGNGGTKGMTGASADNRVVKVPQGTTVSDADTGEVLADMLENGQELVVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF + N AP + G GQ + + L+LK++AD+G++G P+AGKST L+ V+ Sbjct: 121 GRGGRGNIHFATPANPAPELSENGEPGQIRNLKLELKVLADVGLVGFPSAGKSTLLSVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+A Y FTTL PN+G+V+ + ++F++AD+PG+I+ A QG G+G +FL+H ERT V Sbjct: 181 NAKPKVAAYHFTTLSPNIGMVRLDNDRDFVMADLPGLIEGASQGIGLGFQFLRHVERTKV 240 Query: 240 LLHIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNE 295 +LH++ S +E + Y+ ILDEL Y+ + + +IV +++D DS + LA+ + E Sbjct: 241 ILHLINMSGIEGTDPYTQYRKILDELQQYDETILNRPQIVVPTKMDMPDSEENLAKFRKE 300 Query: 296 LATQCGQVPFE-----FSSITGHGIPQILECLHDKI 326 +AT G +P + SSIT G+ ++ D + Sbjct: 301 VATDSG-LPIQPEIVPISSITRDGVKDLMRLTADML 335 >gi|189462904|ref|ZP_03011689.1| hypothetical protein BACCOP_03605 [Bacteroides coprocola DSM 17136] gi|189430520|gb|EDU99504.1| hypothetical protein BACCOP_03605 [Bacteroides coprocola DSM 17136] Length = 394 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 144/327 (44%), Positives = 212/327 (64%), Gaps = 7/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + RREK++ GGPDGG GGRGG V ++ N TL+ +Y+ Sbjct: 6 FVDYVKIYCRSGKGGRGSVHMRREKYMPNGGPDGGDGGRGGHVILRGNRNYWTLLHLKYE 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G K G G D V+ VP GT V+ + +CD+ +GQ +IL GG Sbjct: 66 RHVFAEHGGNGSKNKSFGKDGADKVIEVPCGTVVYNAETGEYVCDITDDGQEVILLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+++T QAP +A PG QE + L+LKL+AD+G++G PNAGKST L++V+ A Sbjct: 126 GGLGNWHFRTATRQAPRFAQPGEPMQEMTVILELKLLADVGLVGFPNAGKSTLLSTVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PKIA+YPFTTL PNLGIV +EG K F++ADIPGII+ A +G G+G RFL+H ER +L Sbjct: 186 RPKIANYPFTTLEPNLGIVSYREG-KSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLL 244 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L +V ++++ Y +L+EL+ +N E+ K ++ +++ D +D + + L Sbjct: 245 LFMVPGDADDIRREYDILLNELAKFNPEMLDKQRVLAITKCDMLDEELIEMLTPTLPE-- 302 Query: 301 GQVPFEF-SSITGHGIPQILECLHDKI 326 +P+ F SS+ GI Q+ + L +++ Sbjct: 303 -NIPYVFISSVANIGIQQLKDILWEEL 328 >gi|89075553|ref|ZP_01161958.1| putative GTP1/Obg family protein [Photobacterium sp. SKA34] gi|89048693|gb|EAR54265.1| putative GTP1/Obg family protein [Photobacterium sp. SKA34] Length = 389 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 143/301 (47%), Positives = 204/301 (67%), Gaps = 6/301 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFR EK+I GGPDGG GG GGDV++ A N NTLID+R Sbjct: 1 MKFIDEATIKVDAGDGGNGVVSFRTEKYIPKGGPDGGDGGDGGDVYLFADENFNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ GE G N +G +G D +LTVPVGT+ ++D +I DL + G ++++A G Sbjct: 61 FERFHAAERGENGRGGNCTGKRGADKILTVPVGTRAVDDDTGEVIADLTEHGMKVMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G LG+ + + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKTMGSLGEVRHLRLELLLLADVGMLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRVDAERNFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ L + V+ A+ I++EL Y+ L K + ++ D +D + K E Sbjct: 241 LLHMIDLLPADGSDPVENAF-TIINELEQYSDRLGNKPRWIVFNKADLLDEEEAQEKMTE 299 Query: 296 L 296 + Sbjct: 300 V 300 >gi|330998462|ref|ZP_08322286.1| Obg family GTPase CgtA [Paraprevotella xylaniphila YIT 11841] gi|329568568|gb|EGG50373.1| Obg family GTPase CgtA [Paraprevotella xylaniphila YIT 11841] Length = 392 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 145/328 (44%), Positives = 215/328 (65%), Gaps = 6/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RR K++ GGPDGG+GGRGG+V+++ N TL+ RY Sbjct: 6 FVDYVKIYCRSGKGGRGSAHMRRAKYVPNGGPDGGNGGRGGNVYLRGNRNYWTLLHLRYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HG G K SG GED + VP GT V+ + +CD+ ++GQ ++L GG Sbjct: 66 RHVFAGHGGNGSKARSSGKDGEDKYIDVPCGTVVYNAETGEYLCDVTEDGQLVLLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +F+++TNQAP YA PG QE ++ ++LKL+ADIG++G PNAGKST L++V+ A Sbjct: 126 GGLGNWNFRTATNQAPRYAQPGEPMQEMMVIMELKLLADIGLVGFPNAGKSTLLSAVSSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+YPFTTL P+LGIV + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 RPKIANYPFTTLEPSLGIVSYRDNQSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V E+++ Y+ +L+EL+ +N E+ K ++ +++ D +D + + L+ Sbjct: 246 FMVPGDTEDIRKEYEILLNELATFNPEMLDKQRVLAITKSDLLDDELIQM----LSENLP 301 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFS 328 VP F SS+TG GI ++ + L ++ S Sbjct: 302 DVPHVFISSVTGTGIAELKDLLWKELNS 329 >gi|265762598|ref|ZP_06091166.1| obg family GTPase CgtA [Bacteroides sp. 2_1_16] gi|263255206|gb|EEZ26552.1| obg family GTPase CgtA [Bacteroides sp. 2_1_16] Length = 388 Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 145/323 (44%), Positives = 208/323 (64%), Gaps = 7/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+ GGPDGG GGRGG V ++ N TL+ RY Sbjct: 8 FVDYVKIYCRSGKGGRGSTHMRREKYTPNGGPDGGDGGRGGHVILRGNRNYWTLLHLRYD 67 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G G D ++ VP GT V+ + +CD+ + GQ +IL GG Sbjct: 68 RHAMAGHGESGSKNRSFGKDGADKIIEVPCGTVVYNAETGEYVCDVTEHGQEVILLKGGR 127 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + L+LKL+AD+G++G PNAGKST L++++ A Sbjct: 128 GGLGNWHFKTATRQAPRFAQPGEPMQEMTVILELKLLADVGLVGFPNAGKSTLLSAISAA 187 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIADYPFTTL PNLGIV ++G + F++ADIPGII+ A +G G+G RFL+H ER +L Sbjct: 188 KPKIADYPFTTLEPNLGIVSYRDG-QSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLL 246 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L ++ A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 247 LFMIPADSDDIRKDYEVLLNELKTFNPEMLDKQRVLAITKSDMLDQELMDEIEPTLPE-- 304 Query: 301 GQVPFEF-SSITGHGIPQILECL 322 +P F SS++G GI + + L Sbjct: 305 -GIPHVFISSVSGLGISMLKDIL 326 >gi|313608648|gb|EFR84498.1| Obg family GTPase CgtA [Listeria monocytogenes FSL F2-208] Length = 429 Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 140/330 (42%), Positives = 213/330 (64%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y+++G+GG G ++FRREKF+ GGP GG GG+G DV L TL+DFR++ Sbjct: 2 FVDQVKIYVKAGNGGDGMVAFRREKFVPNGGPAGGDGGKGADVVFVVDEGLRTLVDFRFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+HGE GM ++ G ED+V+ VP GT V + D +I DL GQR ++A G Sbjct: 62 RIFKAEHGEHGMSKSMHGRGAEDLVVKVPQGTIVKDIDTGEIIADLVAHGQRAVIAKAGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNKRFATPANPAPELSENGEPGQERNVQLELKVLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA Y FTT+ PNLG+V G + F++AD+PG+I+ A QG G+G +FL+H ERT V++ Sbjct: 182 RPKIAAYHFTTIVPNLGMVDAGDGRSFVMADLPGLIEGASQGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALEENVQ-AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ S E V Y I +EL YN L ++ +I+ +++D D++ NE T Sbjct: 242 HVIDMSGSEGRVPYDDYMAINNELEQYNLRLMERPQIIVANKMDMPDAE---ENLNEFKT 298 Query: 299 QCGQ-VP-FEFSSITGHGIPQILECLHDKI 326 + + +P F S++T G+ ++L + DK+ Sbjct: 299 KIAEDIPVFPISAVTKTGLRELLLAIADKL 328 >gi|308273475|emb|CBX30077.1| GTPase obgE [uncultured Desulfobacterium sp.] Length = 331 Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 151/322 (46%), Positives = 213/322 (66%), Gaps = 6/322 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + I+SG+GG G +SFRREKFI GGPDGG GG+GGDV + S +TL DF+ Sbjct: 1 MKFIDEAIITIQSGNGGKGCVSFRREKFIPRGGPDGGDGGKGGDVVFKTISQKHTLYDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ KA++G G +SG KGED+++ +P GT + + D +I DL + Q +A G Sbjct: 61 YKKLLKAENGWHGEGNQKSGKKGEDLIVEIPPGTTMTDTDTGLIIKDLVEPDQSFTIAVG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F +ST++ P +A PG GQ I L+LKLIAD+GIIGLPNAGKST ++ ++ Sbjct: 121 GRGGQGNKKFATSTHRTPRFAQPGEEGQTLKIKLELKLIADVGIIGLPNAGKSTLISVMS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PKIADYPFTTL P LG+V+ G + +F++ADIPG+I+ AH G G+G +FLKH ERT + Sbjct: 181 SAHPKIADYPFTTLTPVLGVVEVGKEDQFVMADIPGLIEGAHTGTGLGIKFLKHVERTRI 240 Query: 240 LLHIVSALEENVQ---AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H++ A N + Y I EL+ Y+ L +K ++V L++ID D+ A + Sbjct: 241 LIHLIDASSINTDSPLSGYDIINKELALYSKNLAEKPQLVVLNKIDITDAKESADIFIKA 300 Query: 297 ATQCGQVPFEFSSITGHGIPQI 318 A + S+ TG+GI ++ Sbjct: 301 AKNTKVI--TISAATGNGIKKL 320 >gi|90580805|ref|ZP_01236608.1| putative GTP1/Obg family protein [Vibrio angustum S14] gi|90438073|gb|EAS63261.1| putative GTP1/Obg family protein [Vibrio angustum S14] Length = 389 Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 143/301 (47%), Positives = 205/301 (68%), Gaps = 6/301 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFR EK+I GGPDGG GG GGDV++ A N NTLID+R Sbjct: 1 MKFIDEAVIKVDAGDGGNGVVSFRTEKYIPKGGPDGGDGGDGGDVYLFADENFNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ GE G N +G +G D +LTVPVGT+ ++D +I DL + G ++++A G Sbjct: 61 FERFHAAERGENGRGGNCTGKRGADKILTVPVGTRAVDDDTGEVIADLTEHGMKVMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G LG+ + + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKTMGSLGEVRHLRLELLLLADVGMLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRVDAERNFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ L + V+ A+ I++EL Y+ +L K + ++ D +D + K E Sbjct: 241 LLHMIDLLPADGSDPVENAF-TIINELEQYSDKLGNKPRWIVFNKADLLDEEEAQEKMTE 299 Query: 296 L 296 + Sbjct: 300 V 300 >gi|301162118|emb|CBW21662.1| putative Spo0B-related GTP-binding protein [Bacteroides fragilis 638R] Length = 386 Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 145/323 (44%), Positives = 208/323 (64%), Gaps = 7/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+ GGPDGG GGRGG V ++ N TL+ RY Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYTPNGGPDGGDGGRGGHVILRGNRNYWTLLHLRYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G G D ++ VP GT V+ + +CD+ + GQ +IL GG Sbjct: 66 RHAMAGHGESGSKNRSFGKDGADKIIEVPCGTVVYNAETGEYVCDVTEHGQEVILLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + L+LKL+AD+G++G PNAGKST L++++ A Sbjct: 126 GGLGNWHFKTATRQAPRFAQPGEPMQEMTVILELKLLADVGLVGFPNAGKSTLLSAISAA 185 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIADYPFTTL PNLGIV ++G + F++ADIPGII+ A +G G+G RFL+H ER +L Sbjct: 186 KPKIADYPFTTLEPNLGIVSYRDG-QSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLL 244 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L ++ A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 245 LFMIPADSDDIRKDYEVLLNELKTFNPEMLDKQRVLAITKSDMLDQELMDEIEPTLPE-- 302 Query: 301 GQVPFEF-SSITGHGIPQILECL 322 +P F SS++G GI + + L Sbjct: 303 -GIPHVFISSVSGLGISMLKDIL 324 >gi|326791201|ref|YP_004309022.1| GTP-binding protein Obg/CgtA [Clostridium lentocellum DSM 5427] gi|326541965|gb|ADZ83824.1| GTP-binding protein Obg/CgtA [Clostridium lentocellum DSM 5427] Length = 425 Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 147/338 (43%), Positives = 216/338 (63%), Gaps = 9/338 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+++RSG GG G +SFRREK++ GGPDGG GGRGG + + S NTL+ FR+Q Sbjct: 2 FVDKVKIFVRSGKGGDGHVSFRREKYVPNGGPDGGDGGRGGHIIFEVDSGCNTLMKFRHQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE G K+ G ED+++ VP GT + E + ++ DL GQR IL GG Sbjct: 62 RHFKAADGENGGKKRCHGKDAEDLIIKVPQGTVIREAETGHVVADLHAAGQREILFKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF ++T QAP Y+ G +E + L+LK+IAD+G++G PN GKST L+ V+ A Sbjct: 122 GGRGNQHFATATRQAPRYSEKGKPAKEYWLILELKMIADVGLVGYPNVGKSTLLSMVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V Y K+F++ADIPG+I+ A +G G+G FL+H ERT VLL Sbjct: 182 QPKIANYHFTTLAPNLGVVTNQYGKQFVMADIPGLIEGAAEGIGLGHDFLRHVERTKVLL 241 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSE-LRKKIEIVGLSQIDTVD-SDTLARKKNE 295 H+V A + V+ Y I E+ +N + L +K +I+ ++ID + + +AR K E Sbjct: 242 HVVDAAGSEGRDPVEDIY-AIQKEIELFNPKILEEKPQIIAANKIDMGNCEENIARLKAE 300 Query: 296 LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 + +V S+ + ++L+ + D + ++ EN Sbjct: 301 FEPKGIKV-LPISAAGNENLQELLKDVADLLATVPSEN 337 >gi|160891013|ref|ZP_02072016.1| hypothetical protein BACUNI_03460 [Bacteroides uniformis ATCC 8492] gi|270294351|ref|ZP_06200553.1| obg family GTPase CgtA [Bacteroides sp. D20] gi|317480957|ref|ZP_07940037.1| obg family GTPase CgtA [Bacteroides sp. 4_1_36] gi|156859234|gb|EDO52665.1| hypothetical protein BACUNI_03460 [Bacteroides uniformis ATCC 8492] gi|270275818|gb|EFA21678.1| obg family GTPase CgtA [Bacteroides sp. D20] gi|316902850|gb|EFV24724.1| obg family GTPase CgtA [Bacteroides sp. 4_1_36] Length = 393 Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 147/326 (45%), Positives = 207/326 (63%), Gaps = 5/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+I GGPDGG GGRGG V ++ N TL+ +Y Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYIPNGGPDGGDGGRGGHVILRGNRNYWTLLHLKYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G G D V+ VP GT V+ + ICD+ + Q +IL GG Sbjct: 66 RHILAGHGESGSKNRSFGKDGADKVIEVPCGTVVYNAETGEYICDVTEHEQEVILLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + ++LKL+AD+G++G PNAGKST LASV+ A Sbjct: 126 GGLGNWHFKTATRQAPRFAQPGEPMQELTVIMELKLLADVGLVGFPNAGKSTLLASVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTTL PNLGIV K F++ADIPGII+ A G G+G RFL+H ER +LL Sbjct: 186 KPKIANYPFTTLEPNLGIVSYRDSKSFVMADIPGIIEGASAGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 246 FMVPADSDDIRKEYEILLNELRTFNPEMLDKQRVLAVTKCDMLDQELMDEIEPTLPE--- 302 Query: 302 QVPFEF-SSITGHGIPQILECLHDKI 326 +P F S+++G GI + + L +++ Sbjct: 303 GIPHIFISAVSGMGISTLKDILWEEL 328 >gi|254411179|ref|ZP_05024956.1| GTP-binding protein Obg/CgtA [Microcoleus chthonoplastes PCC 7420] gi|196181680|gb|EDX76667.1| GTP-binding protein Obg/CgtA [Microcoleus chthonoplastes PCC 7420] Length = 341 Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 149/324 (45%), Positives = 219/324 (67%), Gaps = 3/324 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ + +G GG G ++FRREK++ GGP GG+GGRGGDV + A +L TL+DF+ Sbjct: 1 MQFIDQAEIEVEAGKGGDGIVAFRREKYVPAGGPAGGNGGRGGDVILVAAEHLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y F+A +G +G NR+GA G D + VP GT +++ D +I DL Q GQ A G Sbjct: 61 YAHRFQADNGGRGGPNNRTGANGRDRTIQVPCGTVIYDADTQEIIGDLVQPGQTFCAAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP YA PG+ G+ + + L+LKL+A++GIIGLPNAGKST +A+++ Sbjct: 121 GKGGLGNKHFLSNRNRAPDYALPGLPGEYRRLRLELKLLAEVGIIGLPNAGKSTLIAALS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V++ + + ADIPG+I+ AH G G+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRKPTGDGTVFADIPGLIEGAHLGTGLGYDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ A ++ YQ I EL AY L ++ +I+ L++ID + S+ + EL Sbjct: 241 LLHLIDATADDPIGDYQTIQAELQAYGRGLSERPQILALNKIDAIASEAVELLATEL-NH 299 Query: 300 CGQVP-FEFSSITGHGIPQILECL 322 VP F+ S++T G+ +L+ + Sbjct: 300 LTHVPVFQISAVTQTGLESLLQTV 323 >gi|257791758|ref|YP_003182364.1| GTP-binding protein Obg/CgtA [Eggerthella lenta DSM 2243] gi|317487769|ref|ZP_07946363.1| obg family GTPase CgtA [Eggerthella sp. 1_3_56FAA] gi|325831786|ref|ZP_08164975.1| Obg family GTPase CgtA [Eggerthella sp. HGA1] gi|257475655|gb|ACV55975.1| GTP-binding protein Obg/CgtA [Eggerthella lenta DSM 2243] gi|316913140|gb|EFV34655.1| obg family GTPase CgtA [Eggerthella sp. 1_3_56FAA] gi|325486455|gb|EGC88905.1| Obg family GTPase CgtA [Eggerthella sp. HGA1] Length = 464 Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 143/354 (40%), Positives = 221/354 (62%), Gaps = 24/354 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ +++++ G+GGAG +SFRRE + GGPDGG GG GG+V ++A ++L++LI++R++ Sbjct: 2 FIDKVRIHVKGGNGGAGCMSFRREAHVPKGGPDGGDGGHGGNVVVEADASLSSLIEYRFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV---FEEDGI--SLICDLDQEGQRIIL 117 HFKA+ G G GA GED+VL VP+GT V FEE LI DL +G+R+ + Sbjct: 62 HHFKAERGTHGKGSRMHGATGEDLVLKVPMGTVVHEYFEESKEVGELIADLTHDGERVTV 121 Query: 118 APGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 A GG GG GN HF + T +AP +A G QE+ I L++KL+AD ++G+P+AGKS+ +A Sbjct: 122 AEGGMGGRGNIHFVTPTRRAPAFAELGEPSQERWIELEMKLMADAALVGMPSAGKSSLIA 181 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 ++ A+PKIADYPFTTL PNLG+ + G F++ADIPG+I+ AH+G G+G FL+H ERT Sbjct: 182 KMSAARPKIADYPFTTLVPNLGVARSGDYSFVVADIPGLIEGAHEGRGLGHEFLRHIERT 241 Query: 238 HVLLHIVSALEE----NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR-- 291 +++H+V + + Y I EL+ Y EL + IV ++ID ++ +A Sbjct: 242 ALIVHVVDLTGDYEGRDPLEDYDIINRELALYADELAARPRIVVANKIDVPGAEEVADRL 301 Query: 292 ----KKNELATQCGQ--VP-------FEFSSITGHGIPQILECLHDKIFSIRGE 332 +++ +A G P + S++TG G+ + + K+ +R E Sbjct: 302 AERVREDSIAAAGGDEFAPSPVDPKLYRISALTGEGVDGLKAAIATKVHELREE 355 >gi|313123508|ref|YP_004033767.1| GTPase obg [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280071|gb|ADQ60790.1| GTPase obg [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325684267|gb|EGD26440.1| Spo0B-associated GTP-binding protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 440 Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 149/332 (44%), Positives = 216/332 (65%), Gaps = 9/332 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EKF+ GGP GG GGRGG + A + L TL+DFRY+ Sbjct: 7 FVDQTKIEVQAGKGGDGMVAFRHEKFMPNGGPAGGDGGRGGSIIFVADNGLRTLMDFRYR 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GE G + + G +D+ L VPVGT V++ I DL + GQ +++A GG Sbjct: 67 RKFKAEPGENGRIKAQYGKAAKDLYLKVPVGTTVYDFFTGEEIGDLVENGQELVVAKGGR 126 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +S N AP A G G+ + + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 127 GGRGNIHFATSVNTAPEIAENGEPGEFRTLRLELKVLADVGLVGFPSVGKSTLLSVVTSA 186 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+IK A QG G+G +FL+H ERT V+ Sbjct: 187 KPKIAAYQFTTLKPNLGMVLLPDG-RDFSMADLPGLIKGASQGVGLGIQFLRHVERTKVI 245 Query: 241 LHIVSALEENVQAA---YQCILDELSAYN-SELRKKIEIVGLSQIDTVDSD-TLARKKNE 295 LH+VS +N + A Y+ IL EL++Y +L K EI+ SQ+D +D LA+ K + Sbjct: 246 LHMVSMDPDNGRDAYEDYETILHELASYTEDDLSSKREIIVASQMDIPGADEKLAQFKKD 305 Query: 296 LATQ-CGQVPFEFSSITGHGIPQILECLHDKI 326 LA Q +E SS+T G+ +++ D + Sbjct: 306 LAAHGVDQEVYELSSVTHQGVDRLMSRAADLV 337 >gi|89890173|ref|ZP_01201684.1| GTP-binding protein [Flavobacteria bacterium BBFL7] gi|89518446|gb|EAS21102.1| GTP-binding protein [Flavobacteria bacterium BBFL7] Length = 335 Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 134/295 (45%), Positives = 193/295 (65%), Gaps = 1/295 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D KV++ SG GG G REK+I+ GGPDGG GGRGG + ++ + NL TL F+Y+ Sbjct: 6 FVDYTKVHLESGRGGKGSTHLHREKYIDKGGPDGGDGGRGGHIILRGSKNLWTLYHFKYK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFK+ G G K+ R+G G+DV + +P+GT V + + ++I ++ ++G ++ GG Sbjct: 66 RHFKSAQGGNGAKQRRTGEDGDDVYIDLPLGTVVKDSETGNVIYEMLEDGAEFVICEGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSST Q P YA G+ G ++K++AD+G++G PNAGKST L+ +T A Sbjct: 126 GGRGNWHFKSSTRQTPRYAQQGMEGTSLDAIFEMKVLADVGLVGFPNAGKSTLLSVITSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLGIV+ +K F++ADIPGII+ A G G+G RFL+H ER LL Sbjct: 186 KPKIANYEFTTLKPNLGIVEYRDFKSFVIADIPGIIEGAADGKGLGHRFLRHIERNSTLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 ++ A +++ A Y +L EL YN EL K V +S+ D +D + + + K L Sbjct: 246 FLIPADSDDISAEYDILLKELKKYNPELLDKNRFVCISKADMLDEELMEQMKEGL 300 >gi|81428656|ref|YP_395656.1| GTPase ObgE [Lactobacillus sakei subsp. sakei 23K] gi|123564203|sp|Q38WT4|OBG_LACSS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|78610298|emb|CAI55347.1| Putative GTP-binding protein [Lactobacillus sakei subsp. sakei 23K] Length = 430 Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 142/329 (43%), Positives = 209/329 (63%), Gaps = 8/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FRREKF+ GGP GG GGRGG V + L TL+DFRY+ Sbjct: 2 FVDQVKIDVKAGKGGDGAVAFRREKFVPLGGPAGGDGGRGGSVILVVDEGLRTLMDFRYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 HFKA G G + G ED + VP GT V + D L+ DL ++GQ +++A GG Sbjct: 62 HHFKANSGGNGQNKQMYGRGAEDTFVQVPPGTTVRDADTNELLGDLTEDGQELVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF ++ N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 122 GGRGNMHFATAKNSAPEIAENGEPGQERSIQLELKVLADVGLVGFPSVGKSTLLSVVTSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V+ + ++F+LAD+PG+I+ A G G+G +FL+H ERT V+L Sbjct: 182 KPKIASYQFTTLVPNLGMVQLDDGRDFVLADLPGLIEGASDGVGLGIQFLRHVERTRVVL 241 Query: 242 HIVSALEE---NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ ++ + YQ I EL +Y+ ++ ++ +++ +++D S + LA K +LA Sbjct: 242 HLIEMDDQTGRDPYEDYQQINHELESYDPKILERPQVIVATKMDLPGSAELLAEFKQKLA 301 Query: 298 TQCGQVP--FEFSSITGHGIPQILECLHD 324 G FE SSIT G+ ++ D Sbjct: 302 A-AGDTHEIFEISSITHQGVQPLMNKTAD 329 >gi|307299177|ref|ZP_07578978.1| GTP-binding protein Obg/CgtA [Thermotogales bacterium mesG1.Ag.4.2] gi|306914973|gb|EFN45359.1| GTP-binding protein Obg/CgtA [Thermotogales bacterium mesG1.Ag.4.2] Length = 439 Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 138/324 (42%), Positives = 205/324 (63%), Gaps = 4/324 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 +D ++Y+++GDGG G +SFRREK+I +GGPDGG GGRGG V+++A++++NTL F+++ Sbjct: 9 LVDTGRIYVKAGDGGNGSVSFRREKYIPYGGPDGGDGGRGGHVFLRASNSINTLYGFKHK 68 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F AQ GE G N +G KG+D+V+ VPVGT + D +I DL GQ I++A GG Sbjct: 69 KRFLAQSGESGQGSNMAGKKGKDLVIRVPVGTIAYNADSGEIIADLCNPGQTIVIARGGK 128 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F SSTNQAP A G G+E + L+LK++AD+ ++G PN GKST +++++ A Sbjct: 129 GGRGNARFVSSTNQAPKAAENGEPGEELFVNLELKILADVALVGFPNVGKSTLISTISNA 188 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V + +I+AD+PG+IK AH+G G+G FL+H ER ++ Sbjct: 189 RPKIANYHFTTLSPNLGVVMVSDSQGYIVADVPGLIKGAHEGIGLGHTFLRHIERCKTIV 248 Query: 242 HIVSALEENVQAAYQCILD---ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ E + Q +D EL Y EL K EIV ++ D + ++ Sbjct: 249 HLLDISESEERDFIQDYIDIRYELEFYKRELADKPEIVVANKCDLITQAERQKRLQLFKE 308 Query: 299 QCGQVPFEFSSITGHGIPQILECL 322 G+ S+ T G + E + Sbjct: 309 STGKEIIPVSAATHEGTQALKEVI 332 >gi|218132487|ref|ZP_03461291.1| hypothetical protein BACPEC_00346 [Bacteroides pectinophilus ATCC 43243] gi|217992597|gb|EEC58599.1| hypothetical protein BACPEC_00346 [Bacteroides pectinophilus ATCC 43243] Length = 432 Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 145/336 (43%), Positives = 212/336 (63%), Gaps = 7/336 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D +++I+SG GG G +SFRRE F+ GGPDGG GGRGGDV LNTL DFR+ Sbjct: 6 FADSVRIFIKSGKGGDGHVSFRRELFVPDGGPDGGDGGRGGDVIFVVDKGLNTLGDFRHN 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ GE+G KR G GED+++ VP GT + ++ +I D+ + R ++ GG Sbjct: 66 KKYIAESGEEGGKRRCHGKDGEDLIIKVPEGTVIKDDATGKVITDMSGDNMREVVLRGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN ++ ++T QAP YA PG QE + L+LK+IAD+G++G PN GKSTFL+ VT A Sbjct: 126 GGKGNMNYATATMQAPKYAQPGQEAQEIWVRLELKVIADVGLVGFPNVGKSTFLSRVTNA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIA+Y FTTL PNLG+V F++ADIPG+I+ A +G G+G FL+H ERT VL+H Sbjct: 186 RPKIANYHFTTLSPNLGVVDLDGHGFVIADIPGLIEGASEGTGLGHEFLRHIERTKVLIH 245 Query: 243 IVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKNEL 296 +V A + + I EL AYN +L K+ +++ ++ D + D + + R K E Sbjct: 246 MVDAASTEGRDPIEDINTINAELEAYNPDLLKRPQVIAANKTDVIYSDDENPVDRLKAEF 305 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + +V F S+++G G+ ++L + D + SI E Sbjct: 306 EPKGIKV-FPISAVSGKGVKELLYAVRDMLDSIDEE 340 >gi|213855717|ref|ZP_03383957.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 390 Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 140/307 (45%), Positives = 204/307 (66%), Gaps = 8/307 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRDLLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLMPSLGVVRMDSEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHI-----VSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 LLH+ + + + Y E Y+ +L K + ++ID +D K Sbjct: 241 LLHLIDIDPIDGSDPVGKRPYHYWRTE--KYSQDLAAKPRWLVFNKIDLMDKSEAEEKAK 298 Query: 295 ELATQCG 301 +A G Sbjct: 299 AIAEALG 305 >gi|116327412|ref|YP_797132.1| GTPase ObgE [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331970|ref|YP_801688.1| GTPase ObgE [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280297|sp|Q04Q90|OBG_LEPBJ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|122284787|sp|Q054P6|OBG_LEPBL RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|116120156|gb|ABJ78199.1| GTPase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125659|gb|ABJ76930.1| GTPase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 365 Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 141/327 (43%), Positives = 204/327 (62%), Gaps = 3/327 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + + +G GGAG + FRREK++EFGGPDGG GG GG+V I+ ++ TL + + Sbjct: 4 FVDEVAIEVFAGHGGAGSVHFRREKYVEFGGPDGGDGGTGGNVIIRPNLSMYTLDKYLSK 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ G G+ N SG KGED++L VP+GTQ+++E+ L+ D + Q ++A GG Sbjct: 64 RKFKAEAGFPGVGDNCSGKKGEDLILFVPLGTQIYDEETGDLLFDFVTDTQEFVVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSSTNQ P +A PG G+ K + L LKL+AD+GI+GLPNAGKST ++ +T A Sbjct: 124 GGKGNTHFKSSTNQTPRFAQPGEEGEYKFLRLSLKLLADVGIVGLPNAGKSTLISKITDA 183 Query: 183 KPKIADYPFTTLYPNLGIVKE--GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 PKIA Y FTTL PNLG+VK F +ADIPGII+ A G G+G FL+H ER + Sbjct: 184 HPKIAGYAFTTLSPNLGVVKRRGDIFRFTIADIPGIIEGASMGIGLGLSFLRHIERVKGI 243 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L++ A +++ + + +EL YN EL + ++ L++ID D + Sbjct: 244 LYLFDASSLDIEEDLKMLRNELFTYNPELLNRPYLIVLNKIDIWDDPEFTKDIISKIIHL 303 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIF 327 G+V S+ + ++LE + + F Sbjct: 304 GKV-IAISADKETNLEKLLEAMDEAFF 329 >gi|295110876|emb|CBL27626.1| Obg family GTPase CgtA [Synergistetes bacterium SGP1] Length = 426 Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 133/310 (42%), Positives = 197/310 (63%), Gaps = 1/310 (0%) Query: 10 YIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQH 69 +R+G GG G +SFRREKF+ GGPDG GG GG V ++A + TL DF Y + F+A H Sbjct: 1 MVRAGRGGNGALSFRREKFVPKGGPDGADGGTGGSVILEAVGGVVTLADFEYNRRFQAGH 60 Query: 70 GEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAH 129 G ++GA G D+ + VP GT V +E G ++ DL + GQ + A GG GG GNAH Sbjct: 61 AGHGAGAMKTGANGADLKVLVPCGTLVRDESG-RVLADLVEPGQTFVAARGGRGGKGNAH 119 Query: 130 FKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADY 189 F +S + P +A G G+E+ + L+LKLIAD+G++G PNAGKS+ LA+++ AKP+IA Y Sbjct: 120 FANSVRRTPRFAEKGDPGEERTLTLELKLIADVGLVGFPNAGKSSILAAISGAKPRIAGY 179 Query: 190 PFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 PFTTL PNLG++ ++ ++AD+PG+I+ AH+ G+G +FL+H ERT VLLH+V EE Sbjct: 180 PFTTLSPNLGVLAVDDQQIVVADVPGLIEGAHENKGLGLQFLRHIERTRVLLHVVDLSEE 239 Query: 250 NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSS 309 +V + + E AY ++L + IV ++ D ++ AR + G+ S+ Sbjct: 240 DVLKNLEVVEAEFRAYGADLDGRPCIVVGNKTDLSGTEENARVLKREMERLGRPCLLVSA 299 Query: 310 ITGHGIPQIL 319 + G GIP+++ Sbjct: 300 LRGDGIPELI 309 >gi|297584761|ref|YP_003700541.1| GTP-binding protein Obg/CgtA [Bacillus selenitireducens MLS10] gi|297143218|gb|ADH99975.1| GTP-binding protein Obg/CgtA [Bacillus selenitireducens MLS10] Length = 426 Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 145/330 (43%), Positives = 210/330 (63%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +V++++GDGG G ++FRREK++ GGP GG GGRG D+ + L TL+DFRYQ Sbjct: 2 FVDHVQVHVKAGDGGNGIVAFRREKYVPNGGPAGGDGGRGADIVFEVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFK + GE G + G E V+ VP GT V + + ++ DL GQ+ +A G Sbjct: 62 RHFKGERGENGRTAKQHGKSREANVIKVPPGTTVKDAETGDILADLTVHGQKATIARAGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F + TN AP A G G+EK I L+LKL+AD G++G P+ GKST L+ V++A Sbjct: 122 GGRGNARFATPTNPAPEIAENGEPGEEKTIDLELKLLADAGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTT+ PNLG+V+ + + F+LAD+PG+I+ AH+G G+G +FL+H ERT V++ Sbjct: 182 KPKIADYHFTTIVPNLGVVETDDQRSFVLADLPGLIQGAHEGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ S LE + + I EL AYN L ++ ++V +++D D++ + E Sbjct: 242 HVIDMSGLEGRDPYEDFLTINQELEAYNLRLMERPQLVVANKMDLPDAEAHLQTFKE--- 298 Query: 299 QCG-QVP-FEFSSITGHGIPQILECLHDKI 326 Q G VP F S+ T GI +L + DKI Sbjct: 299 QVGDDVPVFPLSAATKDGITALLRAIADKI 328 >gi|291550375|emb|CBL26637.1| Obg family GTPase CgtA [Ruminococcus torques L2-14] Length = 427 Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 147/332 (44%), Positives = 212/332 (63%), Gaps = 10/332 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+ IRSG GG G SFRRE ++ GGPDGG GG GGD+ + LNTL+D+R++ Sbjct: 2 FADRAKILIRSGKGGDGHCSFRRELYVPNGGPDGGDGGHGGDLIFEVDEGLNTLVDYRHK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A+ GE+G KR G G+D+VL VP GT + E +I D+ E +R ++ GG Sbjct: 62 RKFAAEDGEQGGKRRCHGKDGKDLVLRVPEGTVIKESVTGKVIADMSGENRRQVVLKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST Q P YA PG +E + L+LK+IAD+G+IG PN GKST L+ VT A Sbjct: 122 GGLGNQHFATSTMQVPKYAQPGQPARELEVNLELKVIADVGLIGFPNVGKSTLLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V +G K F++ADIPG+I+ A +G G+G FL+H ERT +++ Sbjct: 182 EPKIANYHFTTLNPNLGVVDLDGAKGFVMADIPGLIEGASEGVGLGHEFLRHIERTKLMI 241 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKN 294 H+V A + V ++ I EL+AYN E+ ++ +++ ++ D + + D + R K Sbjct: 242 HVVDAAGTEGRDPVDDIHK-INAELAAYNPEIAERPQVIAANKTDLIYDPEDDPVQRLKE 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E + +V F S TG GI +L + +++ Sbjct: 301 EFEPKGIKV-FPISGATGKGISDLLYYVSNEL 331 >gi|228472972|ref|ZP_04057729.1| Obg family GTPase CgtA [Capnocytophaga gingivalis ATCC 33624] gi|228275554|gb|EEK14331.1| Obg family GTPase CgtA [Capnocytophaga gingivalis ATCC 33624] Length = 332 Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 154/329 (46%), Positives = 212/329 (64%), Gaps = 6/329 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D KVY+RSG+GG G REKF+E GGPDGG GGRGGD+ I+ NL TLI+F++Q Sbjct: 6 FTDYVKVYVRSGNGGKGSTHLHREKFVEKGGPDGGDGGRGGDIIIRGNKNLWTLINFKFQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 QHF+A+HG G +GA G V L VP+GT V + ++ ++ ++ + I GG Sbjct: 66 QHFRAEHGGDGGANRSTGADGNSVYLEVPLGTIVKDALTDEVLFEITEDKEEKIALKGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF++STNQ P YA PGI G+E+ + L+LK++AD+G++G PNAGKST L+ +T A Sbjct: 126 GGLGNWHFRTSTNQTPRYAQPGIPGEERELLLELKVLADVGLVGFPNAGKSTLLSVLTSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADYPFTTL PNLGIV+ ++ F++ADIPGII+ A QG G+G FL+H ER VLL Sbjct: 186 KPKIADYPFTTLKPNLGIVRYRDFQSFVIADIPGIIEGASQGKGLGHYFLRHIERNSVLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V A N+ Y +L EL YN EL K ++ +S+ D +D + + EL Sbjct: 246 FLVPADSPNIVEEYHILLKELEKYNPELLDKQRLLAISKTDLLDQELQGLIEKELQAASL 305 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFSI 329 +P+ SS+ GI L D+++ + Sbjct: 306 DLPYLLISSVAQQGI----TILKDRLWQL 330 >gi|302670799|ref|YP_003830759.1| GTP-binding protein Obg/CgtA [Butyrivibrio proteoclasticus B316] gi|302395272|gb|ADL34177.1| GTP-binding protein Obg/CgtA [Butyrivibrio proteoclasticus B316] Length = 447 Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 140/324 (43%), Positives = 210/324 (64%), Gaps = 7/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK++I+SG GG G ISFRREKF+ GGPDGG GG+GGDV + +NTL DF Y Sbjct: 4 FVDKAKIFIQSGKGGDGHISFRREKFVNNGGPDGGDGGKGGDVIFKVDEGINTLADFHYG 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +KA++G+ G KR G G D+++ VP GT + E +I D+ + + ++ GG Sbjct: 64 GKYKAENGQDGNKRRCHGKNGSDLIIKVPEGTVIKEAASGQVIADMSGDNKEAVILKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+ +ST QAP YA PG E + L+LK+IAD+G++G PN GKSTFL+ V+ A Sbjct: 124 GGNGNMHYATSTMQAPKYAQPGQPAIELEVLLELKVIADVGLVGFPNVGKSTFLSKVSNA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL P LG+V + + F++ADIPG+I+ A +GAG+G FL+H ERT V++ Sbjct: 184 KPKIANYHFTTLSPMLGVVDLKDARGFVVADIPGLIEGASEGAGLGHEFLRHIERTRVMI 243 Query: 242 HIVSALEENVQAAY---QCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKNE 295 H+V A + + + I +EL YN+++ +K +++ ++ID + ++ + +K + Sbjct: 244 HVVDAASTEGRDPFEDIEAINNELKTYNADITQKPQVIAANKIDMLPDGENSEVIQKIRD 303 Query: 296 LATQCGQVPFEFSSITGHGIPQIL 319 G F S++TG GI ++L Sbjct: 304 KYEPLGVKVFATSTLTGQGIQELL 327 >gi|297520960|ref|ZP_06939346.1| GTPase ObgE [Escherichia coli OP50] Length = 250 Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 129/245 (52%), Positives = 184/245 (75%), Gaps = 1/245 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIV 244 LLH++ Sbjct: 241 LLHLI 245 >gi|311069284|ref|YP_003974207.1| GTPase ObgE [Bacillus atrophaeus 1942] gi|310869801|gb|ADP33276.1| GTPase ObgE [Bacillus atrophaeus 1942] Length = 428 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 145/322 (45%), Positives = 213/322 (66%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KVY++ GDGG G ++FRREK++ GGP GG GG+GGDV Q L TL+DFRYQ Sbjct: 2 FVDQVKVYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGKGGDVVFQVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM +N+ G +D+V+ VP GT V ++D +I DL + GQ ++A GG Sbjct: 62 RHFKAIRGEHGMSKNQHGRNADDMVIKVPPGTVVTDDDTKQVIADLTEHGQIAVIARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G G+E+ I L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNTRFATPANPAPQLSEQGEPGKERYIVLELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+V+ + + F++AD+PG+I+ AH+G G+G +FL+H ERT V++ Sbjct: 182 KPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLIEGAHEGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT-LARKKNELA 297 H++ S LE + Y I ELS YN L ++ +I+ +++D +++ LA K +L Sbjct: 242 HVIDMSGLEGRDPYEDYLTINQELSQYNLRLTERPQIIVANKMDVPEAEEHLAAFKEKLT 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 P S++T G+ +L Sbjct: 302 DDYPVFP--ISAVTRSGLRDLL 321 >gi|238019414|ref|ZP_04599840.1| hypothetical protein VEIDISOL_01283 [Veillonella dispar ATCC 17748] gi|237864113|gb|EEP65403.1| hypothetical protein VEIDISOL_01283 [Veillonella dispar ATCC 17748] Length = 423 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 138/322 (42%), Positives = 213/322 (66%), Gaps = 4/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A+V++++GDGG G SFRREK++ GGP GG GG+G DV +A N+NTL+DFRY+ Sbjct: 2 FIDRARVFVKAGDGGDGMSSFRREKYVPNGGPSGGDGGKGADVIFKADKNINTLVDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA G G N+ G E +++ VP+GT + EE+ + CDL +G ++A GG Sbjct: 62 RQFKAPAGGNGESSNKHGRGSEPLIIPVPLGTVIKEEETGKIFCDLVNDGDTFVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F++S N+AP +A G G+E + L+LK++AD+G++G P+ GKS+ L V++A Sbjct: 122 GGRGNARFQTSANRAPTFAEKGEPGEEFWLQLELKVLADVGLLGYPSVGKSSILRKVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P++A Y FTTL P LG+V G + F+LADIPG+I+ A +G G+G FL+H ERT++L+ Sbjct: 182 QPEVAAYHFTTLTPVLGVVTISGDRSFVLADIPGLIEGASEGVGLGHNFLRHVERTNILI 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+ VS +E + + + I +EL Y+ +L K +IV L++ID V DT + Sbjct: 242 HVLDVSGMEGRDPKVDFDAINEELRKYSEKLANKKQIVALNKIDMVFDDTTIPDTKKYFE 301 Query: 299 QCGQVPFEFSSITGHGIPQILE 320 G F ++++G G+P+++E Sbjct: 302 DKGYEVFLINALSGEGLPELME 323 >gi|290473436|ref|YP_003466303.1| putative GTP-binding protein with nucleoside triP hydrolase domain [Xenorhabdus bovienii SS-2004] gi|289172736|emb|CBJ79507.1| putative GTP-binding protein with nucleoside triP hydrolase domain [Xenorhabdus bovienii SS-2004] Length = 392 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 137/305 (44%), Positives = 206/305 (67%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R +G +G+D+ + VPVGT+V + ++ D+ + QR ++A G Sbjct: 61 FEKSFRAERGQNGQSRGCTGRRGQDITIKVPVGTRVRDIATGEVLADMVRHEQRQMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKTMGTPGESRELMLELMLLADVGMLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A +G G+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEQSFVVADIPGLIEGASEGVGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ E + + I+ EL Y+ +L +K + +++D D + ++ + Sbjct: 241 LLHLIDLCPLDESDPVENARIIIKELHKYSEKLAEKPRWLVFNKVDLTDPEEAKQRAKAI 300 Query: 297 ATQCG 301 A + G Sbjct: 301 ADELG 305 >gi|226325077|ref|ZP_03800595.1| hypothetical protein COPCOM_02869 [Coprococcus comes ATCC 27758] gi|225206425|gb|EEG88779.1| hypothetical protein COPCOM_02869 [Coprococcus comes ATCC 27758] Length = 428 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 153/333 (45%), Positives = 220/333 (66%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+YIRSG GG G +SFRRE ++ GGPDGG GGRGGDV + LNTL+DFR++ Sbjct: 2 FADRAKIYIRSGKGGDGHVSFRRELYVPNGGPDGGDGGRGGDVIFEVDKGLNTLVDFRHK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +KAQ GE+G K+ G +D++L VP GT + E + +I D+ E QR I+ GG Sbjct: 62 TKYKAQDGEEGGKKRCHGKDAKDLILKVPEGTVIREAETNKVIADMSGENQRQIILKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST Q P YA PG QE + L+LK+IAD+G++G PN GKSTFL+ VT A Sbjct: 122 GGLGNMHFATSTMQVPKYAQPGKPAQELWVNLELKVIADVGLVGFPNVGKSTFLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIG-DRFLKHTERTHVL 240 +PKIA+Y FTTL PNLG+V EG K F++ADIPG+I+ A +G G+G + FL+H ERT ++ Sbjct: 182 QPKIANYHFTTLSPNLGVVDLEGAKGFVIADIPGLIEGASEGVGLGHEFFLRHVERTKMM 241 Query: 241 LHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKK 293 +H+V A + V+ Y+ I EL AYN E+ + +++ +++D + D D + R + Sbjct: 242 IHVVDAAGIEGRDPVEDIYK-INAELEAYNKEISMRPQVIAANKVDLIYSEDEDPIQRLR 300 Query: 294 NELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +E + +V F S +TG G+ +L +++++ Sbjct: 301 DEFEPKGIKV-FPISGVTGEGLSDLLYYVNNEL 332 >gi|304413334|ref|ZP_07394807.1| putative GTPase [Candidatus Regiella insecticola LSR1] gi|304284177|gb|EFL92570.1| putative GTPase [Candidatus Regiella insecticola LSR1] Length = 375 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 139/322 (43%), Positives = 214/322 (66%), Gaps = 8/322 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGP+GG GG GGD+++ A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPNGGPNGGDGGDGGDIYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F+A+ G+ G + +G +G+D+ + VPVGT++F++ ++ D+ QR+++A G Sbjct: 61 FIKTFRAERGQNGQSSDCTGKRGKDITIHVPVGTRIFDQTTGEILGDMLHHQQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSINRAPRQKTLGTAGETRELALELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ +++ F++ADIPG+I A G G+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVRMDHQQSFVVADIPGLIAGASAGVGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + V+ A + I++EL YN+ L K + +++D +D + Sbjct: 241 LLHLIDLAPIDGSDPVENA-KIIINELQLYNANLVDKPRWLVFNKVDLIDEKEAEVRAKT 299 Query: 296 LATQCG--QVPFEFSSITGHGI 315 +A G + + S++ HG+ Sbjct: 300 IAAALGWQEKYYTISAVNRHGV 321 >gi|317052395|ref|YP_004113511.1| GTP-binding protein Obg/CgtA [Desulfurispirillum indicum S5] gi|316947479|gb|ADU66955.1| GTP-binding protein Obg/CgtA [Desulfurispirillum indicum S5] Length = 338 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 153/336 (45%), Positives = 220/336 (65%), Gaps = 5/336 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D + ++ G GG G +SFRREK++ GGPDGG GG GG+V ++A TL DF YQ Sbjct: 2 FIDSISIKVQGGRGGNGCMSFRREKYVPLGGPDGGCGGAGGNVVLEADERYQTLHDFNYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+ A+ G+ G N +G GED+VL VP GT V + L+ D+ + GQR ++A GG Sbjct: 62 RHYTAKRGQHGKSANMTGRTGEDLVLKVPPGTLVRDVATGELLADMVENGQRFVVAAGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F+S+ N+AP A+ G G+ + I L+LKL+AD+GI GLPNAGKST ++ ++ A Sbjct: 122 GGRGNLCFQSANNKAPRRADDGQEGEYREIELELKLLADVGIAGLPNAGKSTLISRISSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADYPFTTL P LG+VK Y+ ++ADIPG+I+ A +G G+G +FLKH ERT ++L Sbjct: 182 RPKIADYPFTTLVPQLGVVKVSDYQSMVVADIPGLIRGASEGVGLGHQFLKHIERTSLIL 241 Query: 242 HIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELAT 298 H+V + E +++ AY + +EL AY EL +K IV ++ D+ DSD L +K +LA Sbjct: 242 HLVDLATDEYDIEEAYSIVDEELRAYGDELARKHRIVVGTKTDSCQDSDRL-QKIRKLAE 300 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + G SSITG + ++ +K+ IRG +E Sbjct: 301 ENGFDIIFISSITGDNLDALVRLAWEKLCDIRGIHE 336 >gi|168070633|ref|XP_001786882.1| predicted protein [Physcomitrella patens subsp. patens] gi|162660253|gb|EDQ48304.1| predicted protein [Physcomitrella patens subsp. patens] Length = 333 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 141/324 (43%), Positives = 217/324 (66%), Gaps = 8/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AKVY++ GDGG G ++FRREK++ GGP GG GGRGGDV + L TL+DFRYQ Sbjct: 2 FVDKAKVYVKGGDGGDGLVAFRREKYVPEGGPAGGDGGRGGDVIFRVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GEKG +++ GA ED+++ +P GT + ++D +I DL + GQ++++A GG Sbjct: 62 RHFKAKRGEKGRNKSQHGAGAEDMIVRIPPGTVLIDDDTGEVIADLTRHGQQVVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G GQE+ + ++LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPNNPAPELAEHGEEGQERYVVMELKVMADVGLVGFPSVGKSTLLSVVSGA 181 Query: 183 KPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PKI Y FTT+ PNLG+V+ EG + F++AD+PG+I+ AH+G G+G FL+H ERT V+ Sbjct: 182 RPKIGAYHFTTITPNLGVVEVAEG-RSFVMADLPGLIEGAHEGVGLGHEFLRHVERTRVI 240 Query: 241 LHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 +H+V + Y+ I DEL YN+ L ++ +IV +++D + D LA + ++ Sbjct: 241 IHVVDMAGSEGRDPYEDWVKINDELKQYNANLAERPQIVAANKMDMPQAEDNLAEFREKV 300 Query: 297 ATQCGQVP-FEFSSITGHGIPQIL 319 A ++ SS+T G+ ++L Sbjct: 301 AKDRPELEIMPISSLTRQGVQELL 324 >gi|261880712|ref|ZP_06007139.1| Spo0B-associated GTP-binding protein [Prevotella bergensis DSM 17361] gi|270332484|gb|EFA43270.1| Spo0B-associated GTP-binding protein [Prevotella bergensis DSM 17361] Length = 403 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 147/332 (44%), Positives = 212/332 (63%), Gaps = 9/332 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ RSG GG G + R K+ GGPDGG GG+GGD+ ++ N TL+ RYQ Sbjct: 5 FVDYVKIICRSGKGGRGSMHLCRLKYQPNGGPDGGDGGKGGDIILRGNHNYWTLLHLRYQ 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HGE G + RSGA G+DV + VP GT V++ + +CD+ GQ ++L GG Sbjct: 65 RHIFAEHGENGARSKRSGANGKDVYIDVPCGTVVYDAENGKYVCDVSYHGQEVVLLKGGR 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F+S+T QAP YA PG QE + L+LKL+AD+G++G PNAGKST L +++ A Sbjct: 125 GGLGNYRFRSATRQAPRYAQPGEPLQEMTVILELKLLADVGLVGFPNAGKSTLLTALSSA 184 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+YPFTTL P+LGIV + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 185 RPKIANYPFTTLEPSLGIVSYRDNQSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 244 Query: 242 HIVSALEENVQ----AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +V E+ Q Y +LDE+ +N EL K ++ +++ D +D D + + L Sbjct: 245 FMVPGDSEDSQHDIMRDYDILLDEIRKFNPELLDKQRVLAITKSDLLDEDLIEMLRETLP 304 Query: 298 TQCGQVPFEF-SSITGHGIPQILECLHDKIFS 328 T +P F SS+TG+G+ ++ + L +K+ S Sbjct: 305 T---DLPVVFISSVTGYGLAELKDVLWNKLNS 333 >gi|330448809|ref|ZP_08312456.1| GTP-binding protein Obg/CgtA [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328493000|dbj|GAA06953.1| GTP-binding protein Obg/CgtA [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 390 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 143/301 (47%), Positives = 204/301 (67%), Gaps = 6/301 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFR EK+I GGPDGG GG GGDV++ A N NTLID+R Sbjct: 1 MKFIDEAVIKVDAGDGGNGVVSFRTEKYIPKGGPDGGDGGDGGDVYLLADENFNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ GE G N +G +G D VLTVPVGT+ +ED +I DL + G ++++A G Sbjct: 61 FERFHAAERGENGRGGNCTGKRGADKVLTVPVGTRAVDEDTGEVIADLTEHGMKVMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKTMGSAGEVRHLRLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRVDSDRNFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ L + V+ A+ I++EL Y+ +L K + ++ D +D + K E Sbjct: 241 LLHMIDLLPVDGSDPVENAF-TIINELEQYSDKLGNKPRWIVFNKADLLDEEEAQEKMTE 299 Query: 296 L 296 + Sbjct: 300 V 300 >gi|161723190|ref|YP_210719.2| GTPase ObgE [Bacteroides fragilis NCTC 9343] gi|261266757|sp|Q5LGG9|OBG_BACFN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 388 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 145/323 (44%), Positives = 208/323 (64%), Gaps = 7/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+ GGPDGG GGRGG V ++ N TL+ RY Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYTPNGGPDGGDGGRGGHVILRGNRNYWTLLHLRYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G G D ++ VP GT V+ + +CD+ + GQ +IL GG Sbjct: 66 RHAMAGHGESGSKNRSFGKDGADKIIEVPCGTVVYNAETGEYVCDVTEHGQEVILLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + L+LKL+AD+G++G PNAGKST L++++ A Sbjct: 126 GGLGNWHFKTATRQAPRFAQPGEPMQEMTVILELKLLADVGLVGFPNAGKSTLLSAISAA 185 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIADYPFTTL PNLGIV ++G + F++ADIPGII+ A +G G+G RFL+H ER +L Sbjct: 186 KPKIADYPFTTLEPNLGIVSYRDG-QSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLL 244 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L ++ A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 245 LFMIPADSDDIRKDYEVLLNELKTFNPEMLDKQRVLAITKSDMLDQELMDEIEPTLPE-- 302 Query: 301 GQVPFEF-SSITGHGIPQILECL 322 +P F SS++G GI + + L Sbjct: 303 -GIPHVFISSVSGLGISVLKDIL 324 >gi|53712413|ref|YP_098405.1| GTPase ObgE [Bacteroides fragilis YCH46] gi|81608627|sp|Q64XA5|OBG_BACFR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|52215278|dbj|BAD47871.1| GTP-binding protein [Bacteroides fragilis YCH46] Length = 386 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 145/323 (44%), Positives = 208/323 (64%), Gaps = 7/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+ GGPDGG GGRGG V ++ N TL+ RY Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYTPNGGPDGGDGGRGGHVILRGNRNYWTLLHLRYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G G D ++ VP GT V+ + +CD+ + GQ +IL GG Sbjct: 66 RHAMAGHGESGSKNRSFGKDGADKIIEVPCGTVVYNAETGEYVCDVTEHGQEVILLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + L+LKL+AD+G++G PNAGKST L++++ A Sbjct: 126 GGLGNWHFKTATRQAPRFAQPGEPMQEMTVILELKLLADVGLVGFPNAGKSTLLSAISAA 185 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIADYPFTTL PNLGIV ++G + F++ADIPGII+ A +G G+G RFL+H ER +L Sbjct: 186 KPKIADYPFTTLEPNLGIVSYRDG-QSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLL 244 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L ++ A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 245 LFMIPADSDDIRKDYEVLLNELKTFNPEMLDKQRVLAITKSDMLDQELMDEIEPTLPE-- 302 Query: 301 GQVPFEF-SSITGHGIPQILECL 322 +P F SS++G GI + + L Sbjct: 303 -GIPHVFISSVSGLGISVLKDIL 324 >gi|253563555|ref|ZP_04841012.1| GTPase ObgE [Bacteroides sp. 3_2_5] gi|251947331|gb|EES87613.1| GTPase ObgE [Bacteroides sp. 3_2_5] Length = 388 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 145/323 (44%), Positives = 208/323 (64%), Gaps = 7/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+ GGPDGG GGRGG V ++ N TL+ RY Sbjct: 8 FVDYVKIYCRSGKGGRGSTHMRREKYTPNGGPDGGDGGRGGHVILRGNRNYWTLLHLRYD 67 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G G D ++ VP GT V+ + +CD+ + GQ +IL GG Sbjct: 68 RHAMAGHGESGSKNRSFGKDGADKIIEVPCGTVVYNAETGEYVCDVTEHGQEVILLKGGR 127 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + L+LKL+AD+G++G PNAGKST L++++ A Sbjct: 128 GGLGNWHFKTATRQAPRFAQPGEPMQEMTVILELKLLADVGLVGFPNAGKSTLLSAISAA 187 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIADYPFTTL PNLGIV ++G + F++ADIPGII+ A +G G+G RFL+H ER +L Sbjct: 188 KPKIADYPFTTLEPNLGIVSYRDG-QSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLL 246 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L ++ A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 247 LFMIPADSDDIRKDYEVLLNELKTFNPEMLDKQRVLAITKSDMLDQELMDEIEPTLPE-- 304 Query: 301 GQVPFEF-SSITGHGIPQILECL 322 +P F SS++G GI + + L Sbjct: 305 -GIPHVFISSVSGLGISVLKDIL 326 >gi|60492009|emb|CAH06770.1| putative Spo0B-related GTP-binding protein [Bacteroides fragilis NCTC 9343] Length = 390 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 145/323 (44%), Positives = 208/323 (64%), Gaps = 7/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+ GGPDGG GGRGG V ++ N TL+ RY Sbjct: 8 FVDYVKIYCRSGKGGRGSTHMRREKYTPNGGPDGGDGGRGGHVILRGNRNYWTLLHLRYD 67 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G G D ++ VP GT V+ + +CD+ + GQ +IL GG Sbjct: 68 RHAMAGHGESGSKNRSFGKDGADKIIEVPCGTVVYNAETGEYVCDVTEHGQEVILLKGGR 127 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + L+LKL+AD+G++G PNAGKST L++++ A Sbjct: 128 GGLGNWHFKTATRQAPRFAQPGEPMQEMTVILELKLLADVGLVGFPNAGKSTLLSAISAA 187 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIADYPFTTL PNLGIV ++G + F++ADIPGII+ A +G G+G RFL+H ER +L Sbjct: 188 KPKIADYPFTTLEPNLGIVSYRDG-QSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLL 246 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L ++ A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 247 LFMIPADSDDIRKDYEVLLNELKTFNPEMLDKQRVLAITKSDMLDQELMDEIEPTLPE-- 304 Query: 301 GQVPFEF-SSITGHGIPQILECL 322 +P F SS++G GI + + L Sbjct: 305 -GIPHVFISSVSGLGISVLKDIL 326 >gi|153853133|ref|ZP_01994542.1| hypothetical protein DORLON_00527 [Dorea longicatena DSM 13814] gi|149753919|gb|EDM63850.1| hypothetical protein DORLON_00527 [Dorea longicatena DSM 13814] Length = 426 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 150/331 (45%), Positives = 220/331 (66%), Gaps = 9/331 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D A+++IR+G GG G +SFRREK++ GGPDGG GGRGGDV + LNTL D+R++ Sbjct: 2 FADRARIFIRAGKGGDGHVSFRREKYVANGGPDGGDGGRGGDVIFEVDEGLNTLQDYRHK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A+ GE+G KR GA GED+VL VP GT + E + +I D+ + +R I+ GG Sbjct: 62 RKFTAKDGEQGGKRRCHGADGEDIVLKVPEGTVIKESESGKVIADMSGDNRRQIILKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF ++T Q P YA PG +E + L+LK+IAD+G++G PN GKSTFL+ VT A Sbjct: 122 GGLGNQHFATATMQVPKYAQPGQPAKELYVDLELKVIADVGLVGFPNVGKSTFLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V F++ADIPG+I+ A +G G+G +FL+H ERT +++ Sbjct: 182 QPKIANYHFTTLNPNLGVVDLPDANGFVIADIPGLIEGASEGVGLGHQFLRHIERTKLMI 241 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV--DSDTLARKKNE 295 H+V A + V Y+ I +EL AYN+++ + +++ ++ID + D D + R K+E Sbjct: 242 HVVDAAGTEGRDPVDDIYK-INNELKAYNADIANRPQVIAANKIDAIFTDDDPVQRLKDE 300 Query: 296 LATQCGQVPFEFSSITGHGIPQILECLHDKI 326 Q +V F S +TG GI ++L + +++ Sbjct: 301 FEPQGVKV-FPISGVTGQGIKELLYYVSNEL 330 >gi|261266897|sp|B1HVB2|OBG_LYSSC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 429 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 135/329 (41%), Positives = 210/329 (63%), Gaps = 11/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y++ GDGG G ++FRREK++ GGP GG GG GG+V + L TL+DFRY+ Sbjct: 2 FVDHVKIYVKGGDGGDGMVAFRREKYVPNGGPAGGDGGHGGNVVFEVEEGLRTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM + G ED+++ VP GT V E+ ++I DL + GQR ++A G Sbjct: 62 RHFKAPRGEHGMSKGMHGKNAEDLIVKVPPGTVVMNEETNAVIADLVEHGQRAVIAKAGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP + G GQE + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATPANPAPELSEKGEPGQELNVILELKVLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+++ + ++ F +AD+PG+I+ AH+G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIVPNLGMIETDDHRSFAMADLPGLIEGAHEGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD---TLARKKNE 295 H++ S +E + Y I +EL YN L ++ +I+ +++D D++ T R+K Sbjct: 242 HVIDMSGMEGRDPYEDYLTINEELKQYNLRLTERPQIIVANKMDMPDAEENLTAFRQKVG 301 Query: 296 LATQCGQVPFEFSSITGHGIPQILECLHD 324 Q F S+++ G+ ++L + D Sbjct: 302 EDVQI----FPISAVSRQGLKELLFAIAD 326 >gi|146298182|ref|YP_001192773.1| GTPase ObgE [Flavobacterium johnsoniae UW101] gi|261266791|sp|A5FMX0|OBG_FLAJ1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|146152600|gb|ABQ03454.1| GTPase of ObgE type [Flavobacterium johnsoniae UW101] Length = 333 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 149/332 (44%), Positives = 211/332 (63%), Gaps = 6/332 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y+ SG GG G REKFIE GGPDGG GGRGG V++ L TL ++ Sbjct: 6 FVDYVKIYVSSGKGGKGSTHLHREKFIEKGGPDGGDGGRGGHVYLVGNKGLWTLFHLKFA 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA HG G +GA GED + VP+GT V +++ ++ ++ ++G++ ILA GG Sbjct: 66 RHIKAGHGGDGGSDRSTGADGEDKFIEVPLGTVVKDKETGEVLFEITEDGEKRILAKGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+SSTNQ P YA PG+ G E + L+LK++AD+G++G PNAGKST L+ +T A Sbjct: 126 GGLGNWHFRSSTNQTPRYAQPGLPGLEMDVILELKVLADVGLVGFPNAGKSTLLSVLTSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADYPFTTL PNLGIV ++ F++ADIPGII+ A +G G+G FL+H ER LL Sbjct: 186 KPKIADYPFTTLKPNLGIVAYRDFQSFVIADIPGIIEGAAEGKGLGHYFLRHIERNSTLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V +++A Y +++EL+ YN E+ K ++ +S+ D +D + A K EL Sbjct: 246 FLVPVDTPDIKAEYDILVNELTKYNPEMLDKERLLVISKCDMLDDELKAELKAELDVSFK 305 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFSIRGE 332 +P+ SS+ G L L DK++ + E Sbjct: 306 DIPYMLISSVAQQG----LTDLKDKLWKMLNE 333 >gi|325125555|gb|ADY84885.1| GTP binding protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 384 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 149/332 (44%), Positives = 215/332 (64%), Gaps = 9/332 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EKF+ GGP GG GGRGG + A + L TL+DFRY+ Sbjct: 7 FVDQTKIEVQAGKGGDGMVAFRHEKFMPNGGPAGGDGGRGGSIIFVADNGLRTLMDFRYR 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GE G + + G +D+ L VPVGT V++ I DL + GQ +++A GG Sbjct: 67 RKFKAEPGENGRIKAQYGKAAKDLYLKVPVGTTVYDFFTGEEIGDLVENGQELVVAKGGR 126 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +S N AP A G G+ + + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 127 GGRGNIHFATSVNTAPEIAENGEPGEFRTLRLELKVLADVGLVGFPSVGKSTLLSVVTSA 186 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+IK A QG G+G +FL+H ERT V+ Sbjct: 187 KPKIAAYQFTTLKPNLGMVLLPDG-RDFSMADLPGLIKGASQGVGLGIQFLRHVERTKVI 245 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNS-ELRKKIEIVGLSQIDTVDSD-TLARKKNE 295 LH+VS N + A Y+ IL EL++Y +L K EI+ SQ+D +D LA+ K + Sbjct: 246 LHMVSMDPNNGRDAYEDYETILHELASYTEDDLSSKREIIVASQMDIPGADEKLAQFKKD 305 Query: 296 LATQ-CGQVPFEFSSITGHGIPQILECLHDKI 326 LA Q +E SS+T G+ +++ D + Sbjct: 306 LAAHGVDQEVYELSSVTHQGVDRLMSRAADLV 337 >gi|212636821|ref|YP_002313346.1| GTPase ObgE [Shewanella piezotolerans WP3] gi|261263086|sp|B8CSY3|OBG_SHEPW RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|212558305|gb|ACJ30759.1| GTP-binding protein, HSR1-like:GTP1/OBG subdomain protein [Shewanella piezotolerans WP3] Length = 388 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 144/336 (42%), Positives = 218/336 (64%), Gaps = 8/336 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G+GG+G +SFRREK++ GGPDGG GG GG V++QA NLNTLI ++ Sbjct: 1 MKFVDEATIRVEAGNGGSGCVSFRREKYVPDGGPDGGDGGDGGSVYLQADENLNTLITYQ 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ G+ G R+ +G GED+VL VPVGT+ + + + DL GQ++++A G Sbjct: 61 FERFHNAERGKNGRGRDCTGHGGEDLVLKVPVGTRAVDAETEETLGDLTTHGQKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSTNRAPRQKTLGTDGEVRSLRLELMLLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +AKPK+ADYPFTTL PNLG+V + F++ADIPG+I+ A GAG+G +FLKH ER V Sbjct: 181 KAKPKVADYPFTTLVPNLGVVNPRPGQSFVIADIPGLIEGAADGAGLGVQFLKHLERCRV 240 Query: 240 LLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHI+ N + + I+ EL ++ +L K + +++ D + + L K +++ Sbjct: 241 LLHILDIEPIDGSNPVDSARAIVGELEKHSPKLAGKPRWLVINKADLMLEEELQEKIDKV 300 Query: 297 ATQC---GQVPFEFSSITGHGIPQILECLHDKIFSI 329 + G+V F S+ G ++ L D I ++ Sbjct: 301 VEELAWDGEV-FTISAYNREGTAELALKLLDFIDTL 335 >gi|150020272|ref|YP_001305626.1| GTPase ObgE [Thermosipho melanesiensis BI429] gi|261277720|sp|A6LJZ0|OBG_THEM4 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|149792793|gb|ABR30241.1| GTP-binding protein Obg/CgtA [Thermosipho melanesiensis BI429] Length = 434 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 137/320 (42%), Positives = 209/320 (65%), Gaps = 3/320 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +Y++ G GG G SFR EK++ GGPDGG GG GG V+++A SNL+TL+ + Sbjct: 6 FVDRVIIYVKGGKGGDGSASFRHEKYVPKGGPDGGDGGNGGYVFLRANSNLSTLLTVAEK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A++GE G + G G+D+++ VP+GT V + + +I DLD+ G + +A GG Sbjct: 66 KKYIAENGENGKGKKMHGRNGKDIIIDVPLGTVVKDFETGEIIADLDKNGMVVCVARGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSST + P + G G+E+ + L+LKL+AD+G++G PN GKS+F++ ++ A Sbjct: 126 GGRGNVHFKSSTMRTPKISERGAEGEERKLILELKLLADVGLVGYPNVGKSSFISKISNA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIA+YPFTTL PNLG+V+ +F++ADIPG+IK A +G G+G+ FL+H ER V++H Sbjct: 186 KPKIANYPFTTLIPNLGVVQVDDLQFVVADIPGLIKGASKGVGLGNVFLRHVERCSVIVH 245 Query: 243 IV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 IV S E + Y I EL ++ +L KK EI+ ++ID + + L + +L Sbjct: 246 IVDISGFEGRDPVNDYFDIRRELEYFSEDLAKKEEIIVANKIDLLSKEELEERIQKLKNA 305 Query: 300 CGQVPFEFSSITGHGIPQIL 319 G+ F S +TG GI +++ Sbjct: 306 TGKETFPTSVLTGKGIREVI 325 >gi|104773887|ref|YP_618867.1| GTPase ObgE [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|123077293|sp|Q1GAM3|OBG_LACDA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|103422968|emb|CAI97639.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 440 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 149/332 (44%), Positives = 215/332 (64%), Gaps = 9/332 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EKF+ GGP GG GGRGG + A + L TL+DFRY+ Sbjct: 7 FVDQTKIEVQAGKGGDGMVAFRHEKFMPNGGPAGGDGGRGGSIIFVADNGLRTLMDFRYR 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GE G + + G +D+ L VPVGT V++ I DL + GQ +++A GG Sbjct: 67 RKFKAEPGENGRIKAQYGKAAKDLYLKVPVGTTVYDFFTGEEIGDLVENGQELVVAKGGR 126 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +S N AP A G G+ + + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 127 GGRGNIHFATSVNTAPEIAENGEPGEFRTLRLELKVLADVGLVGFPSVGKSTLLSVVTSA 186 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+IK A QG G+G +FL+H ERT V+ Sbjct: 187 KPKIAAYQFTTLKPNLGMVLLPDG-RDFSMADLPGLIKGASQGVGLGIQFLRHVERTKVI 245 Query: 241 LHIVSALEENVQAA---YQCILDELSAYN-SELRKKIEIVGLSQIDTVDSD-TLARKKNE 295 LH+VS N + A Y+ IL EL++Y +L K EI+ SQ+D +D LA+ K + Sbjct: 246 LHMVSMDPNNGRDAYEDYETILHELASYTEDDLSSKREIIVASQMDIPGADEKLAQFKKD 305 Query: 296 LATQ-CGQVPFEFSSITGHGIPQILECLHDKI 326 LA Q +E SS+T G+ +++ D + Sbjct: 306 LAAHGVDQEVYELSSVTHQGVDRLMSRAADLV 337 >gi|258516444|ref|YP_003192666.1| GTP-binding protein Obg/CgtA [Desulfotomaculum acetoxidans DSM 771] gi|257780149|gb|ACV64043.1| GTP-binding protein Obg/CgtA [Desulfotomaculum acetoxidans DSM 771] Length = 425 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 140/324 (43%), Positives = 212/324 (65%), Gaps = 7/324 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F D AK+Y++ GDGG+G ++FRREK++ GGP GG GGRGG + S LNTL+DFR Sbjct: 3 LMFYDRAKIYVKGGDGGSGCVAFRREKYVPEGGPSGGDGGRGGSIIFVGDSGLNTLVDFR 62 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y H+K GE G ++ +G GED L VPVGT ++ D + L+ D+ + GQ++++A G Sbjct: 63 YHSHYKGNRGEHGQGKDMTGRSGEDRTLRVPVGTVIYNADTMELVADVVEHGQKVVVARG 122 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F + N+ P G GQE+ + L+LKL+AD+G+ G PNAGKST ++ V+ Sbjct: 123 GRGGRGNARFATPNNKVPTAYEKGEPGQERWLRLELKLLADVGLAGFPNAGKSTVISRVS 182 Query: 181 RAKPKIADYPFTTLYPNLGI--VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 AKPKIADYPFTTL PNLG+ V+EG + F++ADIPG+I+ AH G G+G FL+H ERT Sbjct: 183 AAKPKIADYPFTTLVPNLGVVRVREG-ESFVMADIPGLIEGAHTGLGLGHEFLRHLERTR 241 Query: 239 VLLHI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 +++H+ +S E + ++ I EL YN +L ++ ++V +++D D+ + Sbjct: 242 LIIHVLDMSGSEGRDPLEDFRIINRELRLYNEKLARRPQLVAANKMDLPDAAKNLDAFKD 301 Query: 296 LATQCGQVPFEFSSITGHGIPQIL 319 + ++ F S++TG G+ +++ Sbjct: 302 AFSGSYEI-FPISAVTGEGLDRLV 324 >gi|313145619|ref|ZP_07807812.1| GTPase ObgE [Bacteroides fragilis 3_1_12] gi|313134386|gb|EFR51746.1| GTPase ObgE [Bacteroides fragilis 3_1_12] Length = 388 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 145/323 (44%), Positives = 208/323 (64%), Gaps = 7/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+ GGPDGG GGRGG V ++ N TL+ RY Sbjct: 8 FVDYVKIYCRSGKGGRGSTHMRREKYTPNGGPDGGDGGRGGHVILRGNRNYWTLLHLRYD 67 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G G D ++ VP GT V+ + +CD+ + GQ +IL GG Sbjct: 68 RHAMAGHGESGSKNRSFGKDGADKIIEVPCGTVVYNAETGEYVCDVTEHGQEVILLKGGR 127 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + L+LKL+AD+G++G PNAGKST L++++ A Sbjct: 128 GGLGNWHFKTATRQAPRFAQPGEPMQEMTVILELKLLADVGLVGFPNAGKSTLLSAISAA 187 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIADYPFTTL PNLGIV ++G + F++ADIPGII+ A +G G+G RFL+H ER +L Sbjct: 188 KPKIADYPFTTLEPNLGIVSYRDG-QSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLL 246 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L ++ A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 247 LFMIPADSDDIRKDYEVLLNELKTFNPEMLDKQRVLAVTKSDMLDQELMDEIEPTLPE-- 304 Query: 301 GQVPFEF-SSITGHGIPQILECL 322 +P F SS++G GI + + L Sbjct: 305 -GIPHVFISSVSGLGISVLKDIL 326 >gi|238793009|ref|ZP_04636638.1| Uncharacterized GTP-binding protein yhbZ [Yersinia intermedia ATCC 29909] gi|238727609|gb|EEQ19134.1| Uncharacterized GTP-binding protein yhbZ [Yersinia intermedia ATCC 29909] Length = 391 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 136/291 (46%), Positives = 204/291 (70%), Gaps = 4/291 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGD+++ A NLNTLID+R Sbjct: 1 MKFVDEATILVVAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDIFLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F+A+ G+ G R+ +G +G+D+ + VPVGT+V ++ ++ D+ + GQ +++A G Sbjct: 61 FVKSFRAERGQNGQSRDCTGKRGKDITIKVPVGTRVLDQGTGEIVGDMTRHGQILMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKTMGTEGETRELMLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ +++ F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVRMDHEQSFVVADIPGLIEGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH+V E + + I++EL Y+ L +K + ++ID + ++ Sbjct: 241 LLHLVDLAPTDESDPIENAKVIVNELQQYSENLSQKPRWLVFNKIDLIGTE 291 >gi|309791331|ref|ZP_07685854.1| GTP-binding protein Obg/CgtA [Oscillochloris trichoides DG6] gi|308226641|gb|EFO80346.1| GTP-binding protein Obg/CgtA [Oscillochloris trichoides DG6] Length = 438 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 147/333 (44%), Positives = 207/333 (62%), Gaps = 7/333 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D A + +R+G+GG G +FRREKF+ GGP+GG GGRGG V++ A LNTL+ F YQ Sbjct: 5 FFDRATITVRAGNGGNGAATFRREKFVPRGGPNGGDGGRGGHVYLVADPELNTLLHFSYQ 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEE-DGISLICDLDQEGQRIILAPGG 121 + F A+HG G K G +G D+ + VP GT DG+ DL GQR++ A GG Sbjct: 65 RKFVAEHGGNGQKNRMFGPQGADLEVRVPPGTVARTVIDGVEYEIDLAVPGQRLLAARGG 124 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN HF +ST QAP A G GQE I L+LK+IAD+G++G PNAGKST L+ ++ Sbjct: 125 KGGLGNVHFTTSTRQAPRIAEYGEPGQELQIDLELKMIADVGLVGFPNAGKSTLLSVISA 184 Query: 182 AKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIA+YPFTTL PNLG+V G Y+ F++ADIPG+I+ AH G G+G FL+H ERT V+ Sbjct: 185 AQPKIANYPFTTLQPNLGMVTVGDYERFVVADIPGLIEGAHAGVGLGHDFLRHIERTRVI 244 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNEL 296 +H+V + + Y I EL Y EL K+ ++V L++ D + ++ L R + EL Sbjct: 245 IHVVDCAGVDGRDPLDDYAQINAELRQYRPELAKRPQVVALNKQDLPEAAENLERLQREL 304 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 + ++ T G+ +L + + + S+ Sbjct: 305 PVAPEDL-VPIAAATREGLDALLRRVTEVLHSL 336 >gi|116513893|ref|YP_812799.1| GTPase ObgE [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|300812698|ref|ZP_07093107.1| Obg family GTPase CgtA [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|122275337|sp|Q04B11|OBG_LACDB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|116093208|gb|ABJ58361.1| Predicted GTPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|300496325|gb|EFK31438.1| Obg family GTPase CgtA [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 440 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 149/332 (44%), Positives = 215/332 (64%), Gaps = 9/332 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EKF+ GGP GG GGRGG + A + L TL+DFRY+ Sbjct: 7 FVDQTKIEVQAGKGGDGMVAFRHEKFMPNGGPAGGDGGRGGSIIFVADNGLRTLMDFRYR 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GE G + + G +D+ L VPVGT V++ I DL + GQ +++A GG Sbjct: 67 RKFKAEPGENGRIKAQYGKAAKDLYLKVPVGTTVYDFFTGEEIGDLVENGQELVVAKGGR 126 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +S N AP A G G+ + + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 127 GGRGNIHFATSVNTAPEIAENGEPGEFRTLRLELKVLADVGLVGFPSVGKSTLLSVVTSA 186 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+IK A QG G+G +FL+H ERT V+ Sbjct: 187 KPKIAAYQFTTLKPNLGMVLLPDG-RDFSMADLPGLIKGASQGVGLGIQFLRHVERTKVI 245 Query: 241 LHIVSALEENVQAA---YQCILDELSAYN-SELRKKIEIVGLSQIDTVDSD-TLARKKNE 295 LH+VS N + A Y+ IL EL++Y +L K EI+ SQ+D +D LA+ K + Sbjct: 246 LHMVSMDPNNGRDAYEDYETILHELASYTEDDLSSKREIIVASQMDIPGADEKLAQFKKD 305 Query: 296 LATQ-CGQVPFEFSSITGHGIPQILECLHDKI 326 LA Q +E SS+T G+ +++ D + Sbjct: 306 LAAHGVDQEVYELSSVTHQGVDRLMSRAADLV 337 >gi|255007911|ref|ZP_05280037.1| GTPase ObgE [Bacteroides fragilis 3_1_12] Length = 400 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 145/323 (44%), Positives = 208/323 (64%), Gaps = 7/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK+ GGPDGG GGRGG V ++ N TL+ RY Sbjct: 20 FVDYVKIYCRSGKGGRGSTHMRREKYTPNGGPDGGDGGRGGHVILRGNRNYWTLLHLRYD 79 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G K G G D ++ VP GT V+ + +CD+ + GQ +IL GG Sbjct: 80 RHAMAGHGESGSKNRSFGKDGADKIIEVPCGTVVYNAETGEYVCDVTEHGQEVILLKGGR 139 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++T QAP +A PG QE + L+LKL+AD+G++G PNAGKST L++++ A Sbjct: 140 GGLGNWHFKTATRQAPRFAQPGEPMQEMTVILELKLLADVGLVGFPNAGKSTLLSAISAA 199 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIADYPFTTL PNLGIV ++G + F++ADIPGII+ A +G G+G RFL+H ER +L Sbjct: 200 KPKIADYPFTTLEPNLGIVSYRDG-QSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLL 258 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L ++ A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 259 LFMIPADSDDIRKDYEVLLNELKTFNPEMLDKQRVLAVTKSDMLDQELMDEIEPTLPE-- 316 Query: 301 GQVPFEF-SSITGHGIPQILECL 322 +P F SS++G GI + + L Sbjct: 317 -GIPHVFISSVSGLGISVLKDIL 338 >gi|270307453|ref|YP_003329511.1| GTP-binding protein, GTP1/OBG family [Dehalococcoides sp. VS] gi|270153345|gb|ACZ61183.1| GTP-binding protein, GTP1/OBG family [Dehalococcoides sp. VS] Length = 424 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 134/334 (40%), Positives = 215/334 (64%), Gaps = 3/334 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 D ++ I++GDGG+G +SFRREKF+ +GGPDGG GG GG+V+++A S L +L++F+++ Sbjct: 1 MFDRVEIRIKAGDGGSGKVSFRREKFVPYGGPDGGDGGDGGNVYLEADSGLYSLLNFKHK 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGT--QVFEEDGIS-LICDLDQEGQRIILAP 119 + KA +GE GM +G G D+V+ VPVGT + EE+G ++ DL +G R ++A Sbjct: 61 RVHKAANGENGMGSRCTGHNGADLVIKVPVGTVATIVEENGQKRVLADLAADGDRTLVAR 120 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG GN HF SSTNQAP A G G E + L+LKLIAD+ IIG PN GKS+ L+ + Sbjct: 121 GGQGGLGNTHFVSSTNQAPMLAQKGQPGGEYDLILELKLIADVAIIGYPNVGKSSLLSLL 180 Query: 180 TRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 T AKP++A+YPFTTL P +G+++ F++A++PG+I++AH G G+G FL+H RT + Sbjct: 181 TAAKPRVANYPFTTLSPVMGVIQRPEGAFVMAEVPGLIEDAHLGRGLGHDFLRHISRTRM 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 ++H++ +N + EL Y++ L ++ ++V +++ID + E+ + Sbjct: 241 VIHLLDGTSDNPIDDMIKVNSELYLYDASLSERPQVVAVNKIDDELVQLRREELTEIFKE 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 G F S++TG G+ +L + +K+ ++ + Sbjct: 301 AGLEVFFISALTGEGVEVLLTKVAEKLAILKAAD 334 >gi|227544990|ref|ZP_03975039.1| GTP-binding protein [Lactobacillus reuteri CF48-3A] gi|300909975|ref|ZP_07127435.1| obg family GTPase CgtA [Lactobacillus reuteri SD2112] gi|227185033|gb|EEI65104.1| GTP-binding protein [Lactobacillus reuteri CF48-3A] gi|300892623|gb|EFK85983.1| obg family GTPase CgtA [Lactobacillus reuteri SD2112] Length = 438 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 145/331 (43%), Positives = 213/331 (64%), Gaps = 9/331 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ + +G GG G ++FRREK++ GGP GG GGRGG + ++ L TL+DFRY Sbjct: 4 FVDQIKIEVHAGKGGDGMVAFRREKYVPNGGPAGGDGGRGGSIILKVDEGLRTLMDFRYH 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++G GM + +G ED ++ VP GT V + D +I DL ++GQ +++A GG Sbjct: 64 RIFKAKNGGNGMSKQMTGLSAEDTIIAVPQGTTVRDLDTGEIIGDLVEKGQELVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S+ N AP A G G++ + L+LK++AD+G+IG P+ GKST L+ VT A Sbjct: 124 GGRGNIHFASAKNPAPEIAENGEPGEDHYLELELKMLADVGLIGFPSVGKSTLLSVVTGA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V ++F +AD+PG+I+ A +G G+G +FL+H ERT VLL Sbjct: 184 KPKIAAYEFTTLTPNLGMVMLPDGRDFAMADMPGLIEGASKGIGLGLKFLRHIERTRVLL 243 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H+V E+ A Y+ I EL+ Y+ EL K+ +IV +++D +S D LA K +LA Sbjct: 244 HLVDMSSEDPHQAIERYRQINKELANYDPELLKRPQIVVATKMDLPNSADNLAAFKADLA 303 Query: 298 TQ--CGQVP--FEFSSITGHGIPQILECLHD 324 + P F S++T G+ Q+++ D Sbjct: 304 ADKTLEKQPEIFPISAVTHQGVQQLMQLTAD 334 >gi|237752538|ref|ZP_04583018.1| GTPase ObgE [Helicobacter winghamensis ATCC BAA-430] gi|229376027|gb|EEO26118.1| GTPase ObgE [Helicobacter winghamensis ATCC BAA-430] Length = 360 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 138/286 (48%), Positives = 195/286 (68%), Gaps = 2/286 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ SG GG G +SFRREKF+ GGPDGG GG+GG+V+ Q N +TL FR Sbjct: 2 FVDRVEIFVSSGKGGEGAVSFRREKFVINGGPDGGDGGKGGNVYFQVDRNTDTLSHFRGH 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ+G G RN+ G KGE++V+ VP GTQVF+ L+ DL E Q+++ GG Sbjct: 62 KHFKAQNGRPGEGRNKYGKKGENLVIVVPPGTQVFDSQSGELLLDLLDESQKVLFLEGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKS+TNQ P YA G+ G EKI+ L+LKLIAD+G++G PN GKST ++ ++ A Sbjct: 122 GGLGNVHFKSATNQRPTYAQKGLPGIEKILRLELKLIADVGLVGFPNVGKSTLVSVLSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P+LGIV G Y+ F++ADIPGII A +G G+G FL+H ERT LL Sbjct: 182 KPEIANYEFTTLIPSLGIVNVGDYQSFVIADIPGIIGGASEGKGLGIEFLRHIERTQFLL 241 Query: 242 HIVS-ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 ++ A ++Q + + E+S ++ +L + + S+ D V++ Sbjct: 242 FVLDLANYRDIQEQFSVLRLEVSKFSKKLENRPFGIMFSKSDAVEN 287 >gi|222099567|ref|YP_002534135.1| GTP-binding protein Obg/CgtA [Thermotoga neapolitana DSM 4359] gi|261277721|sp|B9K736|OBG_THENN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|221571957|gb|ACM22769.1| GTP-binding protein Obg/CgtA [Thermotoga neapolitana DSM 4359] Length = 438 Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 142/331 (42%), Positives = 221/331 (66%), Gaps = 7/331 (2%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D K+++++GDGG G +SFRREK++ GGPDGG GG GG V+++A +L+TLI+F Sbjct: 7 EFVDRVKIFVKAGDGGNGCVSFRREKYVPKGGPDGGDGGDGGFVFLRANPSLSTLIEFVN 66 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 ++ F A++G+ GM + G G D+ + VPVGT V + +I DLD+ G+ + +A GG Sbjct: 67 KRKFFAENGKHGMGKKMKGRNGRDLYIDVPVGTVVKDASTGQIIADLDEPGKVVCVARGG 126 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNAHF + T QAP A G G+ + + L+LK++AD+G++G PN GKS+ +A ++ Sbjct: 127 RGGRGNAHFSTPTRQAPLIAEKGEKGEARWLELELKILADVGLVGYPNVGKSSLIARISN 186 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A+PKIA+YPFTTL PNLG+VK G F++ADIPG+I+ A +G G+G+ FL+H ER V++ Sbjct: 187 ARPKIANYPFTTLVPNLGVVKYGDFSFVVADIPGLIEGASEGVGLGNVFLRHVERCFVIV 246 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+ VS E E+ Y I +E+ Y+ L +K EIV ++ID ++ + L ++ E+ + Sbjct: 247 HMLDVSGFEREDPARDYFIIREEMKKYSPFLLEKPEIVVANKIDLLEREKLPQRIKEIES 306 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 G+ S++TG G+ + L D++ SI Sbjct: 307 SIGKEVIPISAVTGEGV----DLLLDRVASI 333 >gi|325290563|ref|YP_004266744.1| GTPase obg [Syntrophobotulus glycolicus DSM 8271] gi|324965964|gb|ADY56743.1| GTPase obg [Syntrophobotulus glycolicus DSM 8271] Length = 425 Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 144/320 (45%), Positives = 208/320 (65%), Gaps = 4/320 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+AK+++++GDGG+G +SFRREK++ GGPDGG GGRGG + QA L TL+DFRY+ Sbjct: 2 FYDQAKIFVKAGDGGSGIVSFRREKYVPMGGPDGGDGGRGGSIIFQADEGLRTLVDFRYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+K G+ G +N G E+ L VPVGT V +E+ ++ DL + GQ I+A GG Sbjct: 62 RHYKGDRGQHGQGKNMHGRGAENFTLRVPVGTVVKDEESGEILADLTKHGQSEIVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F S+TN+AP A G GQEK + L+LKL+AD+G++G PN GKST ++ V+ A Sbjct: 122 GGRGNARFMSNTNKAPTIAEKGEPGQEKCLILELKLLADVGLVGFPNVGKSTLISRVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADY FTTL PNLG+V F++ADIPG+I+ AH GAG+G FL+H ERT VL+H Sbjct: 182 KPKIADYHFTTLVPNLGMVNIDETGFVMADIPGLIEGAHSGAGLGHEFLRHVERTRVLVH 241 Query: 243 IVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 ++ + + + + I EL+ Y+ L + +V ++ D ++ K E Sbjct: 242 VLDISGSEDRDPVEDFVKINKELNLYSQTLATRPMLVAANKTDLSGAEGNLAKLRETIGG 301 Query: 300 CGQVPFEFSSITGHGIPQIL 319 ++ F S++TG G+ ++L Sbjct: 302 SYEI-FPISAVTGEGVEKLL 320 >gi|91203087|emb|CAJ72726.1| strongly similar to Obg GTP-binding protein [Candidatus Kuenenia stuttgartiensis] Length = 334 Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 141/324 (43%), Positives = 215/324 (66%), Gaps = 4/324 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DEA +Y++ GDGG G +SFRREK++ GGP+GG GG+GGD+ + A+ + TL+D + Sbjct: 2 FVDEAVIYVKGGDGGNGCVSFRREKYVPHGGPNGGDGGKGGDIILLASEKIETLLDITSR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 A +G G N++G G+D+VL +P GT + +++ ++ D+ G+ I++A GG Sbjct: 62 VKHIADNGIHGKGSNKNGKDGKDIVLLLPRGTLIKDKESDRILKDMSTAGESIVIARGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF ++TN+ P A G G+ + + L+LKL AD G+IG+PNAGKST L+ +++A Sbjct: 122 GGRGNKHFATATNRVPREAEDGQPGEARWLILELKLFADAGLIGMPNAGKSTLLSRISKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADYPFTTL P LG+V+ E ++ FI+ADIPG+I+ AH+G G+GD FL+H ERT VL+ Sbjct: 182 RPKIADYPFTTLQPQLGVVEIENFRRFIVADIPGLIEGAHKGIGLGDEFLRHIERTKVLV 241 Query: 242 HIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ A E++ AY+ I +EL YN +L +K EIV +++D +D +T A +L Sbjct: 242 HMLDASVFPEKDPLEAYRIIRNELKQYNPKLTEKTEIVVANKMDLLDEETGAACIKKLEE 301 Query: 299 QCGQVPFEFSSITGHGIPQILECL 322 S+ITG + ++ L Sbjct: 302 NISHPVCPVSTITGKNLSSLIYLL 325 >gi|296331663|ref|ZP_06874132.1| GTPase ObgE [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675378|ref|YP_003867050.1| cell partioning and DNA repair GTPase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151258|gb|EFG92138.1| GTPase ObgE [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413622|gb|ADM38741.1| GTPase involved in cell partioning and DNA repair [Bacillus subtilis subsp. spizizenii str. W23] Length = 428 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 142/322 (44%), Positives = 215/322 (66%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KVY++ GDGG G ++FRREK++ GGP GG GG+GGDV + L TL+DFRY+ Sbjct: 2 FVDQVKVYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGKGGDVVFEVDEGLRTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM +N+ G +D+V+ VP GT V ++D +I DL + GQ+ ++A GG Sbjct: 62 KHFKAIRGEHGMSKNQHGRNADDMVIKVPPGTVVTDDDTKQVIADLTEHGQQAVIARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP + G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATPANPAPQLSENGEPGKERYVVLELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+V+ + + F++AD+PG+I+ AHQG G+G +FL+H ERT V++ Sbjct: 182 KPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLIEGAHQGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 H++ S LE + Y I +ELS YN L ++ +I+ +++D ++ L K +L Sbjct: 242 HVIDMSGLEGRDPYEDYVTINEELSEYNLRLTERPQIIVANKMDMPQAAENLEAFKEKLT 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 P S++T G+ ++L Sbjct: 302 DDYPVFP--ISAVTREGLRELL 321 >gi|313623663|gb|EFR93819.1| Obg family GTPase CgtA [Listeria innocua FSL J1-023] Length = 429 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 211/329 (64%), Gaps = 7/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y+++G+GG G ++FRREKF+ GGP GG GG+G DV L TL+DFR++ Sbjct: 2 FVDQVKIYVKAGNGGDGMVAFRREKFVPNGGPAGGDGGKGADVVFVVDEGLRTLVDFRFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+HGE GM ++ G ED+V+ VP GT V + D +I DL GQR ++A G Sbjct: 62 RIFKAEHGEHGMSKSMHGRGAEDLVVKVPQGTIVKDIDTGEIIADLVAHGQRAVIAKAGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNKRFATPANPAPELSENGEPGQERNVQLELKVLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA Y FTT+ PNLG+V G + F++AD+PG+I+ A QG G+G +FL+H ERT V++ Sbjct: 182 RPKIAAYHFTTIVPNLGMVDAGDGRSFVMADLPGLIEGASQGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALEENVQ-AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S E V Y I +EL YN L ++ +I+ +++D D+ + L K ++A Sbjct: 242 HVIDMSGSEGRVPYEDYMAINNELEQYNLRLMERPQIIVANKMDMPDAEENLKEFKTKIA 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI 326 P S++T G+ ++L + DK+ Sbjct: 302 EDIPVFP--ISAVTKTGLRELLLAIADKL 328 >gi|172041046|ref|YP_001800760.1| GTPase ObgE [Corynebacterium urealyticum DSM 7109] gi|261266805|sp|B1VGL9|OBG_CORU7 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|171852350|emb|CAQ05326.1| putative GTP-binding protein [Corynebacterium urealyticum DSM 7109] Length = 504 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 141/346 (40%), Positives = 216/346 (62%), Gaps = 14/346 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++++GDGG G S RREKF+ GGPDGG+GG GGD+ ++ ++TL+DFR+ Sbjct: 3 QFVDRVVLHLKAGDGGNGCNSVRREKFMPLGGPDGGNGGHGGDIVLEVDPQVHTLLDFRF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H +A+ G G +R GA+G+D+ L VP GT V +EDG ++ DL GQ++I+A GG Sbjct: 63 SPHVRAERGNNGAGDDRHGARGKDLTLHVPPGTVVIDEDG-EVLADLVSPGQKVIVAQGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S T +AP +A G G++K + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 FGGLGNASLASKTRKAPGFALLGEPGEQKDVTLELKSMADVGLVGFPSAGKSSLISVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V + F +AD+PG+I A +G G+G FL+H ERT VL Sbjct: 182 AKPKIADYPFTTLAPNLGVVSVDHDTFTIADVPGLIPGASEGRGLGLDFLRHIERTAVLA 241 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSE---------LRKKIEIVGLSQIDTVDSDT 288 H+V A E N + + EL +Y SE LR++ ++ L+++D D++ Sbjct: 242 HVVDAAALESERNPLDDIRALEHELDSYQSELSADAGLGDLRERPRVIILNKMDVPDAED 301 Query: 289 LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 +A + E + G F S++ G+ ++ L D + R + E Sbjct: 302 MADLQEEELKKFGWPIFRISTVARTGLNELRFALMDIVREHRKKVE 347 >gi|313893697|ref|ZP_07827264.1| Obg family GTPase CgtA [Veillonella sp. oral taxon 158 str. F0412] gi|313441711|gb|EFR60136.1| Obg family GTPase CgtA [Veillonella sp. oral taxon 158 str. F0412] Length = 423 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 138/322 (42%), Positives = 213/322 (66%), Gaps = 4/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A+V++++GDGG G SFRREK++ GGP GG GG+G DV +A N+NTL+DFRY+ Sbjct: 2 FIDRARVFVKAGDGGDGMSSFRREKYVPNGGPSGGDGGKGADVIFKADKNINTLVDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA G G N+ G E +++ VP+GT + EE+ + CDL +G ++A GG Sbjct: 62 RQFKAPAGGNGESSNKHGRGSEPLIIPVPLGTVIKEEETGKVFCDLVNDGDTFVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F++S N+AP +A G G+E + L+LK++AD+G++G P+ GKS+ L V++A Sbjct: 122 GGRGNARFQTSANRAPTFAEKGEPGEEFWLQLELKVLADVGLLGYPSVGKSSILRKVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P++A Y FTTL P LG+V G + F+LADIPG+I+ A +G G+G FL+H ERT++L+ Sbjct: 182 QPEVAAYHFTTLTPVLGVVIISGDRSFVLADIPGLIEGASEGVGLGHNFLRHVERTNILI 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+ VS +E + + + I +EL Y+ +L K +IV L++ID V DT + Sbjct: 242 HVLDVSGMEGRDPKVDFDAINEELRKYSEKLANKKQIVALNKIDMVFDDTTIPDNKKYFE 301 Query: 299 QCGQVPFEFSSITGHGIPQILE 320 G F ++++G G+P+++E Sbjct: 302 DKGYEVFLINALSGEGLPELME 323 >gi|269960915|ref|ZP_06175285.1| GTP1/Obg family protein [Vibrio harveyi 1DA3] gi|269834355|gb|EEZ88444.1| GTP1/Obg family protein [Vibrio harveyi 1DA3] Length = 391 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 150/331 (45%), Positives = 217/331 (65%), Gaps = 8/331 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA V +++GDGG+G +SF REKFI GGPDGG GG GGDV+IQA NLNTLID+R Sbjct: 1 MKFVDEAVVKVQAGDGGSGVVSFWREKFITKGGPDGGDGGDGGDVYIQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ GE G N +G +G+D+ L VPVGT+ + ++ ++ + G+++++A G Sbjct: 61 FQRFYEAERGENGRGGNCTGKRGKDITLRVPVGTRAVDIHTNEIVAEVAEHGKKVMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + I L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQRTLGTKGEIREIRLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + + +Q A I+DEL Y+ +L K + ++ D + + K E Sbjct: 241 LLHMIDIMPIDQSDPIQNAL-TIIDELEQYSEKLAGKPRWLVFNKTDLMPEEEANEKIQE 299 Query: 296 LATQCGQVP--FEFSSITGHGIPQILECLHD 324 + G F+ S+I +G ++ L D Sbjct: 300 ILDALGWEDEFFKISAINRNGTKELCYKLAD 330 >gi|153834230|ref|ZP_01986897.1| GTP-binding protein Obg/CgtA [Vibrio harveyi HY01] gi|148869418|gb|EDL68424.1| GTP-binding protein Obg/CgtA [Vibrio harveyi HY01] Length = 391 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 150/331 (45%), Positives = 217/331 (65%), Gaps = 8/331 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA V +++GDGG+G +SF REKFI GGPDGG GG GGDV+IQA NLNTLID+R Sbjct: 1 MKFVDEAVVKVQAGDGGSGVVSFWREKFITKGGPDGGDGGDGGDVYIQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ GE G N +G +G+D+ L VPVGT+ + ++ ++ + G+++++A G Sbjct: 61 FQRFYEAERGENGRGGNCTGKRGKDITLRVPVGTRAVDIHTNEIVAEVAEHGKKVMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + I L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQRTLGTKGEIREIRLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + + +Q A I+DEL Y+ +L K + ++ D + + K E Sbjct: 241 LLHMIDIMPIDQSDPIQNAL-TIIDELEQYSEKLAGKPRWLVFNKTDLMPEEEANEKIQE 299 Query: 296 LATQCGQVP--FEFSSITGHGIPQILECLHD 324 + G F+ S+I +G ++ L D Sbjct: 300 ILDALGWEDEYFKISAINRNGTKELCYKLAD 330 >gi|156973123|ref|YP_001444030.1| GTPase ObgE [Vibrio harveyi ATCC BAA-1116] gi|75457059|sp|Q6E0U3|OBG_VIBHA RecName: Full=GTPase Obg/CgtA; AltName: Full=CgtA; AltName: Full=GTP-binding protein Obg gi|261277745|sp|A7N0G2|OBG_VIBHB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|49617797|gb|AAT67594.1| GTP binding protein [Vibrio harveyi] gi|156524717|gb|ABU69803.1| hypothetical protein VIBHAR_00802 [Vibrio harveyi ATCC BAA-1116] Length = 391 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 150/331 (45%), Positives = 217/331 (65%), Gaps = 8/331 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA V +++GDGG+G +SF REKFI GGPDGG GG GGDV+IQA NLNTLID+R Sbjct: 1 MKFVDEAVVKVQAGDGGSGVVSFWREKFITKGGPDGGDGGDGGDVYIQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ GE G N +G +G+D+ L VPVGT+ + ++ ++ + G+++++A G Sbjct: 61 FQRFYEAERGENGRGGNCTGKRGKDITLRVPVGTRAVDIHTNEIVAEVAEHGKKVMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + I L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQRTLGTKGEIREIRLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + + +Q A I+DEL Y+ +L K + ++ D + + K E Sbjct: 241 LLHMIDIMPIDQSDPIQNAL-TIIDELEQYSEKLAGKPRWLVFNKTDLMPEEEANEKIQE 299 Query: 296 LATQCGQVP--FEFSSITGHGIPQILECLHD 324 + G F+ S+I +G ++ L D Sbjct: 300 ILDALGWEDEYFKISAINRNGTKELCYKLAD 330 >gi|161611323|ref|NP_970550.2| GTPase ObgE [Bdellovibrio bacteriovorus HD100] gi|261266752|sp|Q6MGS5|OBG_BDEBA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 343 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 154/345 (44%), Positives = 213/345 (61%), Gaps = 25/345 (7%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + + SG GG G +SFRRE GGPDGG+GG+GGDV I+ + ++N+L+D R Sbjct: 1 MKFIDEVSISLASGRGGPGCVSFRRESMQARGGPDGGNGGKGGDVIIRTSRHINSLVDIR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + AQ G G R +SG GED++L VP GT DG +I D+ + +L G Sbjct: 61 QNKRYAAQSGRMGEGRQKSGMDGEDLILIVPQGTVFRNMDG-EIIIDMTGISEHTLLK-G 118 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN FK+S NQAP +A PG GQE + L+LKLIAD+GI+G PNAGKST ++ ++ Sbjct: 119 GRGGKGNEFFKNSVNQAPEHAQPGEEGQEIEVRLELKLIADVGIVGFPNAGKSTLISRIS 178 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+VK G Y F++ADIPG++K AH G G+G +FLKH ERT + Sbjct: 179 AARPKIADYPFTTLTPNLGVVKAGDYSSFVVADIPGLVKGAHAGVGLGIQFLKHIERTRL 238 Query: 240 LLHIVSA--------LEENVQAAYQCILDELSAYNSE---------LRKKIEIVGLSQID 282 +H+V A LE+ Y I +EL Y+ L + ++V L++ID Sbjct: 239 FIHLVDASGMSGRDPLED-----YTDINNELKMYDENNQDKEGFFPLSTRPQLVVLNKID 293 Query: 283 TVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 T+ L + K + G PF S++TG I + ++ L +I Sbjct: 294 TLSESQLTKLKKQFKEASGSEPFAISAVTGKNIKEFVQELARQIL 338 >gi|333029920|ref|ZP_08457981.1| GTPase obg [Bacteroides coprosuis DSM 18011] gi|332740517|gb|EGJ70999.1| GTPase obg [Bacteroides coprosuis DSM 18011] Length = 386 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 147/326 (45%), Positives = 209/326 (64%), Gaps = 5/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G RREK++ GGPDGG GGRGG V ++ N TL+ RY+ Sbjct: 6 FVDYVKIYCRSGKGGRGSTHMRREKYVPKGGPDGGDGGRGGHVILRGNRNYWTLLHLRYE 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HGE G + G G D V+ VP GT VF + ICD+ Q +IL GG Sbjct: 66 RHVFADHGESGGAKKCFGKDGADRVIEVPCGTVVFNGETGEYICDITDHDQEVILLQGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FK+STNQAP YA PG QE + L+LKL+AD+G++G PNAGKST L++V+ A Sbjct: 126 GGLGNVNFKTSTNQAPRYAQPGEPMQEMTVILELKLLADVGLVGFPNAGKSTLLSAVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTTL PNLGIV K F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 KPKIANYPFTTLEPNLGIVSYRDNKSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A E+++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 246 FVIPADTEDIKKEYEILLNELKTFNPEMLDKQRVLAITKSDVLDEELMELLEPTLPE--- 302 Query: 302 QVPFEF-SSITGHGIPQILECLHDKI 326 +P F S++T + I Q+ + + +++ Sbjct: 303 NIPHLFISAVTNYNIAQLKDIIWEEL 328 >gi|221134877|ref|ZP_03561180.1| GTPase ObgE [Glaciecola sp. HTCC2999] Length = 385 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 144/306 (47%), Positives = 207/306 (67%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G + FRREK+I GGPDGG GG GG V++ A NLNTLID+R Sbjct: 1 MKFVDEAEIRVEAGDGGNGVVGFRREKYIPKGGPDGGDGGDGGSVYLVADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ +A+ G G N +G G D+ + VPVGT+ ++D + ++ DL + GQR+ +A G Sbjct: 61 FERFHRAERGTNGQGANCTGKGGADLEVKVPVGTRATDKDTLEVLGDLLKHGQRLKVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSSTN+AP + G G+ + + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GFHGLGNARFKSSTNRAPRQKSNGTPGEIRNLLLELMLLADVGMLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V+ + + F++ADIPG+I+ A GAG+G +FLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPNLGVVRMDAMQSFVIADIPGLIEGASDGAGLGIQFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH+V + + V+ A I+ EL Y+ +L KK + ++ID + D + Sbjct: 241 LLHLVDIMPADGSDPVENA-NAIIKELEQYSPKLAKKPRWLVFNKIDLMFEDEAQALCEK 299 Query: 296 LATQCG 301 +A G Sbjct: 300 IANDLG 305 >gi|261209776|ref|ZP_05924081.1| GTP-binding protein Obg [Vibrio sp. RC341] gi|260841166|gb|EEX67679.1| GTP-binding protein Obg [Vibrio sp. RC341] Length = 390 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 139/291 (47%), Positives = 200/291 (68%), Gaps = 4/291 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +++GDGG G +SF REKFI GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEAVIKVQAGDGGNGVVSFWREKFITNGGPDGGDGGDGGDVYMVADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ G+ G N +G G+D L VPVGT+ + +I ++ + G++I++A G Sbjct: 61 FQRFYEAERGKNGGGGNCTGKSGKDKELRVPVGTRAVDIHTNEIIGEVAEHGKKIMIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSS N++P G G+ + I L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNARFKSSVNRSPRQKTMGTKGELRDIRLELLLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVSVLPEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH++ L + Q I+DEL Y+ +L KK + +++D + + Sbjct: 241 LLHMIDILPADQSDPAQNALTIIDELEQYSEKLAKKPRWLVFNKVDLMSEE 291 >gi|291276657|ref|YP_003516429.1| putative GTP-binding protein [Helicobacter mustelae 12198] gi|290963851|emb|CBG39687.1| putative GTP-binding protein [Helicobacter mustelae 12198] Length = 377 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 142/322 (44%), Positives = 210/322 (65%), Gaps = 9/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D + + SG GGAG +SFRREKF+ GGPDGG GG GGDV+ N +TL FR + Sbjct: 22 FVDRVDILLSSGKGGAGAVSFRREKFVINGGPDGGDGGDGGDVYFVIDENSDTLSQFRGK 81 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H++AQ+G+ G +N +G +GED+++ VP GT V++E +L+ DL + QR+ + GG Sbjct: 82 RHYRAQNGQPGQGKNCTGKRGEDLIIKVPAGTMVYDEQSNALLYDLTDQKQRVRVLSGGK 141 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GGFGNA FK+S NQAP YA G+ G++ + L+LKLIAD+G++G PN GKST +++++ A Sbjct: 142 GGFGNARFKNSINQAPSYAQKGLEGKQLHVRLELKLIADVGLVGYPNVGKSTLISTLSNA 201 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IA+Y FTTL PNLG+V + F++ADIPGII A QG G+G FL+H ERT LL Sbjct: 202 RPEIANYEFTTLIPNLGVVDVDEIHSFVMADIPGIIDGASQGRGLGLEFLRHIERTRFLL 261 Query: 242 HIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELAT 298 ++ ++ + + Y+ + DEL ++SEL + + LS++D + D D ++R + Sbjct: 262 FVIDLTSYRDGI-TQYKNLKDELRRFSSELAARNFGIVLSKMDGLEDGDLVSR----FFS 316 Query: 299 QCGQVPFEFSSITGHGIPQILE 320 G E+ I G G LE Sbjct: 317 HLGYPYKEYKGIEGSGFISSLE 338 >gi|311031493|ref|ZP_07709583.1| GTPase ObgE [Bacillus sp. m3-13] Length = 427 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 140/329 (42%), Positives = 214/329 (65%), Gaps = 7/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G ++FRREK++ GGP GG GG+G DV +Q L TL+DFRY+ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAFRREKYVPDGGPAGGDGGKGADVILQVEEGLRTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM +N+ G E +++ VP GT V ++D + DL + GQ+ ++A GG Sbjct: 62 RHFKATRGEHGMSKNQHGRNSEAMIVKVPPGTVVMDDDTKETLADLTEHGQQYVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATPRNPAPEVAENGEPGQERYVVLELKVLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTT+ PNLG+V+ E + F++AD+PG+I+ AH+G G+G +FL+H ERT V++ Sbjct: 182 KPKIAEYHFTTIVPNLGVVETEDGRSFVMADLPGLIQGAHEGVGLGHQFLRHIERTRVII 241 Query: 242 HIVSA--LE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H+V LE + Y I EL YN L ++ ++V +++D D+ + L K +L Sbjct: 242 HVVDMGGLEGRDPYEDYLTINAELKEYNMRLTERAQLVVANKMDMPDAEENLEIFKEQLG 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI 326 P S++T G+ +L + D++ Sbjct: 302 EDVKVFP--ISALTRSGLRDLLYAVADEL 328 >gi|39577381|emb|CAE81204.1| GTP-binding protein [Bdellovibrio bacteriovorus HD100] Length = 354 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 154/345 (44%), Positives = 213/345 (61%), Gaps = 25/345 (7%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + + SG GG G +SFRRE GGPDGG+GG+GGDV I+ + ++N+L+D R Sbjct: 12 MKFIDEVSISLASGRGGPGCVSFRRESMQARGGPDGGNGGKGGDVIIRTSRHINSLVDIR 71 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + AQ G G R +SG GED++L VP GT DG +I D+ + +L G Sbjct: 72 QNKRYAAQSGRMGEGRQKSGMDGEDLILIVPQGTVFRNMDG-EIIIDMTGISEHTLLK-G 129 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN FK+S NQAP +A PG GQE + L+LKLIAD+GI+G PNAGKST ++ ++ Sbjct: 130 GRGGKGNEFFKNSVNQAPEHAQPGEEGQEIEVRLELKLIADVGIVGFPNAGKSTLISRIS 189 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+VK G Y F++ADIPG++K AH G G+G +FLKH ERT + Sbjct: 190 AARPKIADYPFTTLTPNLGVVKAGDYSSFVVADIPGLVKGAHAGVGLGIQFLKHIERTRL 249 Query: 240 LLHIVSA--------LEENVQAAYQCILDELSAYNSE---------LRKKIEIVGLSQID 282 +H+V A LE+ Y I +EL Y+ L + ++V L++ID Sbjct: 250 FIHLVDASGMSGRDPLED-----YTDINNELKMYDENNQDKEGFFPLSTRPQLVVLNKID 304 Query: 283 TVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 T+ L + K + G PF S++TG I + ++ L +I Sbjct: 305 TLSESQLTKLKKQFKEASGSEPFAISAVTGKNIKEFVQELARQIL 349 >gi|296124376|ref|YP_003632154.1| GTP-binding protein Obg/CgtA [Planctomyces limnophilus DSM 3776] gi|296016716|gb|ADG69955.1| GTP-binding protein Obg/CgtA [Planctomyces limnophilus DSM 3776] Length = 368 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 143/328 (43%), Positives = 213/328 (64%), Gaps = 11/328 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ ++ + GDGG G SFRRE + GGPDGG GGRGG V I A N+++L+ Sbjct: 2 FVDQIEITCKGGDGGPGCSSFRREAHVPRGGPDGGDGGRGGHVVIIADENVDSLVHLVGI 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+ A +G G ++G GED+V+ VP+GT + + ++ DL G +I+A GG Sbjct: 62 RHWFASNGNPGTSSLKTGKDGEDLVIRVPMGTILRDSQRGFVLRDLTDHGDTVIVAKGGE 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN F SSTN+AP PG G+++ + L+LK++AD+G+IG PNAGKST L+ +TRA Sbjct: 122 GGYGNTRFMSSTNRAPREFGPGEPGEKRELLLELKVVADVGLIGKPNAGKSTLLSRMTRA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 P+IA+YPFTT +PNLGIV+ GY ++F++ADIPG+I+ AH G G+G FL+H ERT VL+ Sbjct: 182 TPEIANYPFTTKHPNLGIVRVGYERQFVMADIPGLIEGAHAGVGLGHEFLRHVERTRVLV 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V ++ Y I +EL Y+ +L ++ EIV +S+ + +D+D K L Sbjct: 242 HLVEPNPDDQTDPIENYLQIREELRLYDDDLAQRPEIVVISKSELLDADA---AKELLEE 298 Query: 299 QCGQVPFEFSSITGHGIP----QILECL 322 + G+ + S++TG G+P QI+E L Sbjct: 299 RIGKPVLQISAMTGKGLPVLTKQIIEIL 326 >gi|322382594|ref|ZP_08056472.1| GTPase ObgE-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153449|gb|EFX45856.1| GTPase ObgE-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 433 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 144/333 (43%), Positives = 219/333 (65%), Gaps = 6/333 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK+Y++ GDGG G I+FRREK++ GGP GG GG GG+V + L TL+DFRYQ Sbjct: 2 FIDKAKIYVKGGDGGDGLIAFRREKYVPEGGPAGGDGGNGGNVIFRVDEGLRTLVDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKG + + GA E +++ VP GT V ++D + +I DL + GQ +I+A GG Sbjct: 62 KHFKAQRGEKGRNKAQHGANAEHMIVRVPPGTVVIDDDTMEVIADLTRHGQEVIVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNMRFATPKNSAPEIAENGEEGQERWVVLELKVMADVGLVGFPSVGKSTLLSIVSGA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V G + F++AD+PG+I+ AH+G G+G FL+H ERT V+ Sbjct: 182 RPKIGAYHFTTLTPNLGVVDVGDGRSFVMADLPGLIQGAHEGVGLGHEFLRHVERTRVIA 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT-LARKKNELA 297 H+ ++A E + YQ I DEL YN++L ++ +IV +++D +++ L + K L+ Sbjct: 242 HVLDMAATEGRDPYDDYQKINDELKLYNAKLEERPQIVVANKMDMPEAEEHLEQFKANLS 301 Query: 298 TQCGQVPF-EFSSITGHGIPQILECLHDKIFSI 329 +V S+++ G+ ++ + D + +I Sbjct: 302 KAGDEVEIVPISAVSRSGVQVLMYKIADLLETI 334 >gi|229543695|ref|ZP_04432755.1| GTP-binding protein Obg/CgtA [Bacillus coagulans 36D1] gi|229328115|gb|EEN93790.1| GTP-binding protein Obg/CgtA [Bacillus coagulans 36D1] Length = 430 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 140/327 (42%), Positives = 215/327 (65%), Gaps = 7/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G ++FRREK++ GGP GG GGRGGDV + L TL+DFRY+ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAFRREKYVPMGGPAGGDGGRGGDVIFEVDEGLRTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA HGE GM + + G +D+++ VP GT V ++D I DL + G+R ++A GG Sbjct: 62 RHFKADHGENGMSKGKHGRGAKDMIVKVPPGTVVIDDDTKQTIADLTRHGERAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G GQE+ I L+LKL+AD+G++G P+ GKST L+ ++ A Sbjct: 122 GGRGNIRFATPANPAPEIAENGEPGQERYIVLELKLLADVGLVGFPSVGKSTLLSVISSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V+ E + F++AD+PG+I+ AH+G G+G +FL+H ERT +++ Sbjct: 182 RPKIAEYHFTTLVPNLGVVETEDGRSFVMADLPGLIEGAHEGVGLGHQFLRHIERTRLIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ +A+E + Y I EL AY+ L ++ +++ +++D + + LA K +L Sbjct: 242 HVIDMAAVEGRDPYEDYLTINKELKAYHERLSERPQLIIANKMDLPGAEENLAAFKEKLG 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHD 324 P S++T G+ +L + D Sbjct: 302 DVARVFP--ISAVTRKGLRDVLFAIAD 326 >gi|153838983|ref|ZP_01991650.1| GTP-binding protein Obg/CgtA [Vibrio parahaemolyticus AQ3810] gi|149747571|gb|EDM58503.1| GTP-binding protein Obg/CgtA [Vibrio parahaemolyticus AQ3810] Length = 388 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 150/329 (45%), Positives = 216/329 (65%), Gaps = 8/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DEA V +++GDGG+G +SF REKFI GGPDGG GG GGDV+IQA NLNTLID+R+Q Sbjct: 1 FVDEAVVKVQAGDGGSGVVSFWREKFITKGGPDGGDGGDGGDVYIQADENLNTLIDYRFQ 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + ++A+ GE G N +G +G+D+VL VPVGT+ + ++ ++ + G+++++A GG Sbjct: 61 RFYEAERGENGRGGNCTGKRGKDIVLRVPVGTRAVDIHTNEIVAEVAEHGKKVMVAKGGW 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 G GN FKSS N+AP G G+ + I L+L L+AD+G++GLPNAGKSTF+ +V+ A Sbjct: 121 HGLGNTRFKSSVNRAPRQRTLGTKGEIREIRLELLLLADVGMLGLPNAGKSTFIRAVSAA 180 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER VLL Sbjct: 181 KPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRVLL 240 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 H++ + + VQ A I+DEL Y+ +L K + +++D + + K E+ Sbjct: 241 HMIDIMPIDQSDPVQNAL-TIIDELEQYSEKLASKPRWLVFNKVDLMPEEEANEKIQEIL 299 Query: 298 TQCGQVP--FEFSSITGHGIPQILECLHD 324 G F+ S+I G ++ L D Sbjct: 300 DALGWEDEYFKISAINRSGTKELCYKLAD 328 >gi|117619959|ref|YP_855475.1| GTPase ObgE [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|261266635|sp|A0KGS9|OBG_AERHH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|117561366|gb|ABK38314.1| GTP-binding protein Obg/CgtA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 400 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 138/288 (47%), Positives = 198/288 (68%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE ++ + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEVQIRVDAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDVYLVADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ GE G N +G +G+D +L VPVGT+ +ED L+ DL Q++++A G Sbjct: 61 FERFHAAERGENGQSANCTGRRGKDRILRVPVGTRASDEDTGELLGDLTHHEQKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP + G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKSNGTPGEVRTLKLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V+ E + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AARPKVADYPFTTLVPNLGVVRGENSRSFVIADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTV 284 L+H+V + + I+ EL Y+ EL K + +++D + Sbjct: 241 LIHLVDICPVDGSDPAENAVTIVRELEKYSPELASKPRWLVFNKMDLI 288 >gi|325981719|ref|YP_004294121.1| GTP-binding protein Obg/CgtA [Nitrosomonas sp. AL212] gi|325531238|gb|ADZ25959.1| GTP-binding protein Obg/CgtA [Nitrosomonas sp. AL212] Length = 354 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 143/327 (43%), Positives = 211/327 (64%), Gaps = 9/327 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF DEA + + +G GG G SFRREK+I GGPDGG GGRGG ++ A N+NTLID+R Sbjct: 1 MKFFDEAIIQVYAGKGGDGVASFRREKYIPKGGPDGGDGGRGGSIFAVADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + +A+ GE G +R G ED+VL +PVGT + + + + DL + Q+I+LA G Sbjct: 61 FARIHRAKKGENGQGSDRYGKSAEDIVLRMPVGTIIKDINTGETLADLTHDQQKILLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSSTN+AP G GQE + L+LK++AD+G++G+PNAGKST + +V+ Sbjct: 121 GSGGIGNLHFKSSTNRAPRQFTQGEPGQEFELKLELKVLADVGLLGMPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V+ + + F++ADIPG+I+ A G G+G RFLKH RT + Sbjct: 181 AARPKVADYPFTTLQPNLGVVRVDHNRSFVMADIPGLIEGAADGVGLGHRFLKHLTRTRL 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARK 292 LLH++ E ++ + + EL Y+ L +K + L++ D + + D L R+ Sbjct: 241 LLHVIDMTPLDAETDLIHEARALAGELEKYDESLYQKPRWLVLNKTDMMPEQERDELCRQ 300 Query: 293 KNELATQCGQVPFEFSSITGHGIPQIL 319 + + + F S++TG G ++ Sbjct: 301 FVD-KLEWKENYFIISALTGEGCKHLI 326 >gi|257459093|ref|ZP_05624212.1| Obg family GTPase CgtA [Campylobacter gracilis RM3268] gi|257443478|gb|EEV18602.1| Obg family GTPase CgtA [Campylobacter gracilis RM3268] Length = 351 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 132/286 (46%), Positives = 195/286 (68%), Gaps = 2/286 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ ++SGDGGAG +SFRREKF+ GGPDGG GG GGDV+ + N +TL ++ + Sbjct: 2 FIDSVKLSVKSGDGGAGCVSFRREKFVISGGPDGGDGGDGGDVYFRVDKNSHTLSSYKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKAQ+G G R ++G GED+ L VP GT V++ED L+ D+ +G+ + GG Sbjct: 62 REFKAQNGAPGEGRKKTGKSGEDLYLIVPPGTSVYDEDSGELVLDMLNDGETRLFLRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSS NQAP YA G+ GQ + + L+LKLIAD+G++G PN GKST +++V+ A Sbjct: 122 GGLGNVHFKSSINQAPEYAQKGLEGQTREVRLELKLIADVGLVGFPNVGKSTLISTVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+V+ + Y F++ADIPGII+ A +G G+G +FLKH ERT +LL Sbjct: 182 KPQIANYEFTTLTPKLGLVEVDEYSGFVMADIPGIIEGASEGRGLGVQFLKHVERTKILL 241 Query: 242 HIVS-ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 ++ A +++ + + E + ++ L K+ + L++ D ++ Sbjct: 242 FMLDLANYRSLEEQFDALRAETAKFSEGLAKRDYAIALTRADAAEN 287 >gi|170078130|ref|YP_001734768.1| GTPase ObgE [Synechococcus sp. PCC 7002] gi|261277761|sp|B1XN32|OBG_SYNP2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|169885799|gb|ACA99512.1| GTP binding protein [Synechococcus sp. PCC 7002] Length = 354 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 147/325 (45%), Positives = 211/325 (64%), Gaps = 1/325 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D A++ + +G GG G ++FRREK++ GGP GG+GG GG V +A NL TL+DFR Sbjct: 1 MQFIDHAEIEVIAGKGGDGIVAFRREKYVPAGGPAGGNGGWGGSVIFRAEENLQTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + FKAQ GE+G N +GA GED+++ VP GT +++ + I DL GQ +A G Sbjct: 61 YARTFKAQDGERGGPNNCTGASGEDLIVDVPCGTVIYDRETDEEIGDLVFHGQIFCVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S+ N+AP YA PG+ G+ K + L+LKL+A++GIIGLPNAGKST +++++ Sbjct: 121 GKGGLGNKHFLSNKNRAPEYALPGLEGEIKQLRLELKLLAEVGIIGLPNAGKSTLISALS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKI YPFTTL PNLG+VK + + ADIPG+I+ AHQG G+G FL+H ERT V Sbjct: 181 AARPKIGAYPFTTLIPNLGVVKRPTGDGTVFADIPGLIEGAHQGVGLGHEFLRHIERTKV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V E+ Y+ I EL AY L + +I+ L+++D D + EL Sbjct: 241 LVHLVDLNAEDPIKNYETIQGELEAYGRGLPELPQIIALNKLDAGDHEFADFITEELRRL 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHD 324 S+++ G+ Q+L+ + D Sbjct: 301 TDAKILTISAVSRTGLEQLLQEIWD 325 >gi|260588590|ref|ZP_05854503.1| Obg family GTPase CgtA [Blautia hansenii DSM 20583] gi|331082056|ref|ZP_08331184.1| GTPase obg [Lachnospiraceae bacterium 6_1_63FAA] gi|260541065|gb|EEX21634.1| Obg family GTPase CgtA [Blautia hansenii DSM 20583] gi|330405651|gb|EGG85181.1| GTPase obg [Lachnospiraceae bacterium 6_1_63FAA] Length = 430 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 142/325 (43%), Positives = 211/325 (64%), Gaps = 10/325 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+YIRSG GG G +SFRRE ++ GGPDGG GG+GGDV + +N L D+R++ Sbjct: 2 FADRAKIYIRSGKGGDGHVSFRRELYVPNGGPDGGDGGKGGDVIFEVDKGMNALTDYRHK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + A +GE+G K+ GA G+D+VL VP GT + E + +I D+ R ++ GG Sbjct: 62 SKYAAGNGEEGGKKRCHGANGKDIVLKVPEGTVIKEAESGKVIADMSGTNTRQVVLRGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+ ++T Q P YA PG QE + L+LK+IAD+G+IG PN GKST L+ V+ A Sbjct: 122 GGKGNQHYATATMQVPKYAQPGQPAQELEVQLELKVIADVGLIGFPNVGKSTLLSRVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IA+Y FTTL P+LG+V + F++ADIPG+I+ A +G G+G +FL+H ERT VL+ Sbjct: 182 RPQIANYHFTTLNPHLGVVDLDDCNGFVIADIPGLIEGASEGVGLGHQFLRHIERTRVLI 241 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKN 294 H+V A + + Y+ I EL AY+ EL K+ +++ ++ID V D D + + ++ Sbjct: 242 HLVDAASTEGRDPIDDIYK-INKELEAYDPELMKRPQVIAANKIDAVYEGDEDPVQKIRD 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQIL 319 E Q +V F S+++G G+ ++L Sbjct: 301 EFEPQGMKV-FAISAVSGKGLKELL 324 >gi|332664907|ref|YP_004447695.1| GTPase obg [Haliscomenobacter hydrossis DSM 1100] gi|332333721|gb|AEE50822.1| GTPase obg [Haliscomenobacter hydrossis DSM 1100] Length = 358 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 143/329 (43%), Positives = 208/329 (63%), Gaps = 5/329 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ RSG GGAG + F ++K GGPDGG GGRGG + ++ N+ TL+ +Y+ Sbjct: 6 FVDYVKICCRSGAGGAGSVHFLQDKHTSMGGPDGGDGGRGGHIILRGNRNVWTLLALKYR 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A G G N SGA GEDV+L VP+GT + + + ++ + + I+APGG Sbjct: 66 KHVIASPGVNGRGANSSGADGEDVILDVPLGTVAKDAETGEIEFEITEHDEIRIIAPGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA FKS TNQ P +A PG G+E+ L+LK++AD+G++G PNAGKST L+ V+ A Sbjct: 126 GGKGNAFFKSPTNQTPRHAQPGEPGREEWKILELKVLADVGLVGFPNAGKSTLLSVVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI DYPFTTL PNLGIV K F++ADIPGII++A++G G+G RFL+H ER LL Sbjct: 186 KPKIGDYPFTTLTPNLGIVSYRDEKSFVMADIPGIIEHANEGKGLGLRFLRHIERNSTLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V A +++ Y +L EL YN EL K ++ +++ D +D + KK T Sbjct: 246 FMVPADTDDINREYTILLRELELYNPELLDKPRVLAITKSDLIDEEL---KKLLQPTIPK 302 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFSI 329 +P+ + S++ G+ ++ + L + I S+ Sbjct: 303 DIPYVYISAVAEQGLMELKDLLWESINSV 331 >gi|300780663|ref|ZP_07090518.1| Spo0B-associated GTP-binding protein [Corynebacterium genitalium ATCC 33030] gi|300533649|gb|EFK54709.1| Spo0B-associated GTP-binding protein [Corynebacterium genitalium ATCC 33030] Length = 506 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 145/347 (41%), Positives = 220/347 (63%), Gaps = 18/347 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D+A +++++GDGG G +S REKF GGPDGG+GG GGD+ + + ++TL+DF+Y Sbjct: 3 QFVDQAVLHLQAGDGGHGCVSVHREKFKPLGGPDGGNGGHGGDIILVVSPQVHTLLDFQY 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H KA+ G G NR+GA+GED+VL VPVGT V + DG ++ DL+ G R I A GG Sbjct: 63 RPHLKAKRGGNGEGDNRNGARGEDLVLEVPVGTVVRDADG-EILADLNAPGMRFIAAEGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA ++ +AP +A G GQ + L+LK +AD+G++G P+AGKS+ +++++ Sbjct: 122 YGGLGNAALATAKRKAPGFALKGEPGQAHDLILELKSMADVGLVGFPSAGKSSLISTLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G+ F +AD+PG+I A QG G+G FL+H ERT VL+ Sbjct: 182 AKPKIADYPFTTLQPNLGVVDVGHDTFTIADVPGLIPGASQGKGLGLDFLRHIERTAVLV 241 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNS------------ELRKKIEIVGLSQIDTVD 285 H+V + LE + Q+ + + EL +Y +LR++ I+ L++ID D Sbjct: 242 HVVDCATLEPGRDPQSDIEALEAELDSYAELIETESHESGLGDLRERPRIIVLNKIDIPD 301 Query: 286 SDTLAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 + LA ++LA + + S++T G+ ++ L D + R Sbjct: 302 ARELAEFLHDDLAERFSWPIYTISTVTHEGLEELKWALWDVVKQSRA 348 >gi|228982770|ref|ZP_04143029.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis Bt407] gi|228776953|gb|EEM25261.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis Bt407] Length = 427 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 140/329 (42%), Positives = 212/329 (64%), Gaps = 7/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+++AKV ++ GDGG G ISFRREK++ GGP GG+GG GG+V L TL+DFRY+ Sbjct: 2 FIEQAKVSVKGGDGGNGMISFRREKYVPNGGPAGGNGGNGGNVVFVVDEGLRTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A +G+ GM + + G +D++L VP GT + +E+ ++ DL GQ I+ GG Sbjct: 62 RRFSADNGQHGMSKRQHGRNSDDLMLKVPPGTIIKDENSGQILADLVTHGQEAIIVKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++ N AP A G G+E+ + L LK++AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNVCFSTAKNPAPNIAENGEPGEERDLVLDLKVMADVGLVGFPSVGKSTLLSVVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADY FTTL PNLG+V E + F++AD+PG+I+ AHQG G+G +FL+H ERT V++ Sbjct: 182 RPKIADYHFTTLVPNLGVVATEDNRSFVMADLPGLIEGAHQGVGLGHQFLRHIERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT-LARKKNELA 297 H+V S LE N Y+ I++EL Y++ L +++ S++D D++ LA K E+ Sbjct: 242 HLVDMSGLEGRNPYEDYKTIINELKEYDARLVSLPQVIVASKMDMPDAEVNLAIFKEEIE 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI 326 P S++ GI ++L + D + Sbjct: 302 DDIAIFP--ISTLNQKGIRELLFSVADLV 328 >gi|77361569|ref|YP_341144.1| GTPase ObgE [Pseudoalteromonas haloplanktis TAC125] gi|123587706|sp|Q3IFF6|OBG_PSEHT RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|76876480|emb|CAI87702.1| GTPase (Obg family) involved in ribosome maturation; multicopy suppresssor of ftsJ (rrmJ); associated to the ribosome; may bind ppGpp [Pseudoalteromonas haloplanktis TAC125] Length = 385 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 153/341 (44%), Positives = 225/341 (65%), Gaps = 15/341 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE ++ + +GDGGAG +SFRREK+I GGPDGG GG GG V++QA NLNTLID++ Sbjct: 1 MKFVDEVEIRVEAGDGGAGIVSFRREKYIPEGGPDGGDGGDGGSVYLQADENLNTLIDYQ 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ +A G G RN +G K +D+++ VPVGT++ + D + DL Q GQ+I++A G Sbjct: 61 FERFHRADRGTNGRSRNCTGKKSDDLIIMVPVGTRIMDVDTQEGLGDLTQHGQKILVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSSTN+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GFHGLGNARFKSSTNRAPRQKTLGTEGEVRNLKLELLLLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V+ E K F++ADIPG+I+ A GAG+G +FLKH ER + Sbjct: 181 AAKPKVADYPFTTLIPNLGVVRPEANKSFVIADIPGLIEGASDGAGLGIQFLKHLERCRI 240 Query: 240 LLHIVSALEEN----VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHI+ + + V A+ I++EL Y+ +L +K + ++ID + +D + Sbjct: 241 LLHIIDVMPVDGSNPVDNAF-AIVNELHQYSPKLAEKPRWLVFNKIDLLPADEAKALCEK 299 Query: 296 LATQCGQVP--FEFSSITG-------HGIPQILECLHDKIF 327 +A + G+ + S+I H + +LE + + F Sbjct: 300 IAQELGETENIYSISAINKSNTQPLIHDVMTLLESMPKEKF 340 >gi|158520105|ref|YP_001527975.1| GTP-binding protein Obg/CgtA [Desulfococcus oleovorans Hxd3] gi|261266759|sp|A8ZRY1|OBG_DESOH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|158508931|gb|ABW65898.1| GTP-binding protein Obg/CgtA [Desulfococcus oleovorans Hxd3] Length = 333 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 142/336 (42%), Positives = 212/336 (63%), Gaps = 16/336 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + SG GG G +SFRRE+F+ GGPDGG GG GG + + + TL FR Sbjct: 1 MKFIDEATITVSSGKGGRGCVSFRRERFVPRGGPDGGDGGSGGSLLFRVNPSKRTLYAFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ F A +G G R ++G G+D+V+ VP GT +F+ D ++I D+ + + G Sbjct: 61 SKKQFAAPNGAPGEGRQKTGKSGDDLVIEVPPGTLIFDADTGAIIRDMVSPEEDFVFLTG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF +ST+Q P +A PG Q + L+LKL+AD+G+IGLPNAGKST L+ ++ Sbjct: 121 GRGGKGNKHFATSTHQTPRFAQPGEPAQTATVRLELKLLADVGLIGLPNAGKSTLLSVIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P I YPFTTL PNLG+V G + F +ADIPG+I+ AH GAG+G RFLKH ERT + Sbjct: 181 AARPAIGAYPFTTLSPNLGMVTLAGAEPFAVADIPGLIEGAHTGAGLGIRFLKHIERTRL 240 Query: 240 LLHIV--SALEE-NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+H++ SA++ + A ++ I EL+ ++ L ++ ++V L+++D ++ LA++ Sbjct: 241 LVHLIDASAIDPADPVAPFRIINAELAMFSPALAERPQVVVLNKMDLTGAEALAQQFINA 300 Query: 297 A--TQCGQVPFEFSSITGHGIPQI------LECLHD 324 A +C F S+ T G+ ++ L C HD Sbjct: 301 AGIKKC----FLISAATRSGVEELKKHLFELLCSHD 332 >gi|319651710|ref|ZP_08005836.1| GTPase [Bacillus sp. 2_A_57_CT2] gi|317396529|gb|EFV77241.1| GTPase [Bacillus sp. 2_A_57_CT2] Length = 430 Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 137/328 (41%), Positives = 215/328 (65%), Gaps = 5/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KVY++ GDGG G ++FRREK++ GGP GG GG+G +V + L TL+DFRYQ Sbjct: 2 FVDQVKVYVKGGDGGNGMVAFRREKYVPNGGPAGGDGGKGANVVFEVNEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM +N+ G +D+++ VP GT V + + +I DL + GQ+ ++A GG Sbjct: 62 RHFKAPRGEHGMSKNQHGRNAKDMIVKVPPGTVVTDAESGEVIADLTEHGQKAVIARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LKL+AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNTRFATPANPAPELSEHGEPGQERDVVLELKLLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ E + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGMVETEDGRSFVMADLPGLIEGAHSGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ +A+E + Y I EL YN L ++ +++ +++D D++ +K E Sbjct: 242 HVIDMAAVEGRDPFEDYLTINKELKEYNLRLTERPQVIVANKMDMPDAEENLKKFKEQLE 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKI 326 + + F S++T G+ +L + DK+ Sbjct: 302 EEYPI-FPISALTRQGLRDLLFAVADKL 328 >gi|310658675|ref|YP_003936396.1| GTPase obg [Clostridium sticklandii DSM 519] gi|308825453|emb|CBH21491.1| GTPase Obg [Clostridium sticklandii] Length = 426 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 152/325 (46%), Positives = 216/325 (66%), Gaps = 6/325 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK+YI++G+GG G ++FRRE ++ GGP GG GG+GG+V I A SNL TL+D+RY+ Sbjct: 2 FVDKAKLYIKAGNGGNGAVAFRREIYVPAGGPAGGDGGKGGNVIIIADSNLRTLMDYRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + A+ GE G N G GED+ L VPVGT + +E+ ++ DL +G I A GG Sbjct: 62 SKYVAEPGEDGKGSNMFGKHGEDLYLRVPVGTIIKDEETGLVMADLKNDGDEFIAAKGGY 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+S QAP +A G G+EK I L+L+LIAD+G+IG PN GKSTFL+ +++A Sbjct: 122 GGKGNTHFKTSVRQAPGFAKAGKDGEEKNIILELRLIADVGLIGFPNVGKSTFLSIISKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+ K + F++ADIPGII+ A++G G+G FL+H ERT VL+ Sbjct: 182 KPKIANYHFTTLTPNLGVTKLKNGDSFVVADIPGIIEGANEGIGLGHDFLRHIERTKVLV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HIV S +E + ++ I EL YN +L + +IV +++D +D D K EL Sbjct: 242 HIVDISGIEGRDPLDDFEKINTELKKYNEKLSSRPQIVVANKMDILDDIDIYNNFKAELE 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECL 322 + +V + S+ T G+ +IL + Sbjct: 302 NRGYKV-YSMSAATLSGVDEILNTI 325 >gi|294634501|ref|ZP_06713036.1| Obg family GTPase CgtA [Edwardsiella tarda ATCC 23685] gi|291092015|gb|EFE24576.1| Obg family GTPase CgtA [Edwardsiella tarda ATCC 23685] Length = 391 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 137/305 (44%), Positives = 206/305 (67%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA ++I +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEAVIHIEAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V + D ++ D+ + Q++++ G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGQDVTIKVPVGTRVTDVDTGEVLGDMTRHQQKLLVGKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRDLNLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFL+H ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEKSFVVADIPGLIEGASEGAGLGIRFLRHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ E + + I+ EL Y+ +L +K + ++ D + + + + Sbjct: 241 LLHLIDIAPIDESDPVENARVIIGELEKYSEKLSQKPRWLVFNKADLLTPEEAKARAQAI 300 Query: 297 ATQCG 301 A G Sbjct: 301 ADALG 305 >gi|218294599|ref|ZP_03495453.1| GTP-binding protein Obg/CgtA [Thermus aquaticus Y51MC23] gi|218244507|gb|EED11031.1| GTP-binding protein Obg/CgtA [Thermus aquaticus Y51MC23] Length = 417 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 137/325 (42%), Positives = 214/325 (65%), Gaps = 6/325 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F D + + +G GG G +SFRREKF+ GGPDGG GGRGG V+++A ++++L + Sbjct: 1 MTFQDVLHITVAAGKGGDGAVSFRREKFVPKGGPDGGDGGRGGSVYLRARGSVDSLSEL- 59 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ ++A+ GE G + G G D+V+ VP GT+V++ D L+ DL +EG+ +++A G Sbjct: 60 SKRTYRAEDGEHGKGGGQHGRAGRDLVIEVPRGTRVYDADTGELLADLTEEGETVLVARG 119 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF + T QAP +A G G+++ + L+L LIAD+G++G PNAGKS+ L + T Sbjct: 120 GEGGRGNVHFVTPTRQAPRFAEAGEEGEKRRLRLELMLIADVGLVGYPNAGKSSLLRATT 179 Query: 181 RAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 A PK+A YPFTTL P+LG+ + EG + F LADIPGII+ A QG G+G FL+H RT Sbjct: 180 HAHPKVAPYPFTTLSPHLGVAELGEGVR-FTLADIPGIIEGASQGKGLGLEFLRHIARTR 238 Query: 239 VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 VLL+++ A E ++ + + E+ AY+ L ++ ++ L+++D + + +A + EL + Sbjct: 239 VLLYVLDATEAPLE-VLRTLRKEVGAYDPGLLRRPSLIALNKVDLLSEEEVAARVAEL-S 296 Query: 299 QCGQVPFEFSSITGHGIPQILECLH 323 Q G S++TG G+P++LE L+ Sbjct: 297 QEGLPVLPVSALTGEGVPELLEALY 321 >gi|189347758|ref|YP_001944287.1| GTPase ObgE [Chlorobium limicola DSM 245] gi|261266722|sp|B3EHE6|OBG_CHLL2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|189341905|gb|ACD91308.1| GTP-binding protein Obg/CgtA [Chlorobium limicola DSM 245] Length = 338 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 139/336 (41%), Positives = 218/336 (64%), Gaps = 6/336 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D A +++++GDGG G +SFRREK++ GGPDGG GGRGG VW++ S+L TL+DF+ Sbjct: 1 MKFVDSATIFVQAGDGGKGCVSFRREKYVPKGGPDGGDGGRGGHVWLKTNSHLTTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++H+ A G G ++G G D+V+ VP GT V +I DL + +++++A G Sbjct: 61 YKRHYDAGRGTHGQGSRKTGKDGADIVIEVPCGTVVRNAATKEVIADLTVDDEKVLIANG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF + T QAP ++ P G+ + +LKL+AD+G++G PNAGKST ++ ++ Sbjct: 121 GRGGRGNQHFATPTRQAPRFSEPPGKGESLELEFELKLMADVGLVGFPNAGKSTLISVMS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLGIV+ E YK F++ADIPGII+ A +G G+G +FL+H ERT V Sbjct: 181 AARPKIADYPFTTLVPNLGIVRYEDYKSFVVADIPGIIEGAAEGRGLGLQFLRHIERTKV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L +V+A ++ Y+ +L E+ +++ L K I ++++D D + + + Sbjct: 241 LAVLVAADSGDIALEYRTLLGEMEKFDAALLDKPRIAIVTKMDIAPEDLVIP-----SFE 295 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 G SS+TG G+ ++ + + ++ S + ++ Sbjct: 296 DGVTVLAISSVTGTGLKELKDEMWVRVSSHASDKKY 331 >gi|262403937|ref|ZP_06080494.1| GTP-binding protein Obg [Vibrio sp. RC586] gi|262349899|gb|EEY99035.1| GTP-binding protein Obg [Vibrio sp. RC586] Length = 390 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 139/291 (47%), Positives = 199/291 (68%), Gaps = 4/291 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +++GDGG G +SF REKFI GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEAVIKVQAGDGGNGVVSFWREKFITNGGPDGGDGGDGGDVYMVADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ G+ G N +G G+D L VPVGT+ + +I ++ + G++I++A G Sbjct: 61 FQRFYEAERGKNGGGGNCTGKSGKDKELRVPVGTRAVDIHTNEIIGEVAEHGKKIMIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSS N++P G G+ + I L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNARFKSSVNRSPRQKTMGTKGELRDIRLELLLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVSVLPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH++ L + Q I+DEL Y+ +L KK + +++D + + Sbjct: 241 LLHMIDILPADQSDPAQNALTIIDELEQYSEKLAKKPRWLVFNKVDLMSEE 291 >gi|298372357|ref|ZP_06982347.1| Obg family GTPase CgtA [Bacteroidetes oral taxon 274 str. F0058] gi|298275261|gb|EFI16812.1| Obg family GTPase CgtA [Bacteroidetes oral taxon 274 str. F0058] Length = 330 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 146/325 (44%), Positives = 206/325 (63%), Gaps = 3/325 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG+GG G F REKF+ GGPDGG GGRGG + ++ + + TL+ +YQ Sbjct: 5 FIDYVKIYCRSGNGGKGSTHFHREKFVPKGGPDGGDGGRGGHIILRGSKDYWTLLHLKYQ 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A HG G G GED + VP GT + +CD+ ++GQ +L GG Sbjct: 65 RHIFAGHGGDGSSSRSFGKDGEDKTIVVPCGTIARDAVSGEFLCDITEDGQEAVLVRGGR 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+++TNQ P YA PG EK + L+LK++AD+G++G PNAGKST L+ V+ A Sbjct: 125 GGLGNWHFRTATNQTPRYAQPGEPLTEKEVILELKVLADVGLVGFPNAGKSTLLSVVSAA 184 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTTL PNLGIV+ ++ F +ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 185 KPKIANYPFTTLTPNLGIVEYRDHRSFCIADIPGIIEGAAEGKGLGVRFLRHIERNSILL 244 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V+A +V Y+ +L EL YN EL K I+ +S+ D +D + + + L + Sbjct: 245 FMVAADSHDVVGDYKILLGELERYNPELLDKKRILTISKSDIIDEEQMKEIEQTLPKEIP 304 Query: 302 QVPFEFSSITGHGIPQILECLHDKI 326 + FSS+TG GI Q+ + L + + Sbjct: 305 HL--FFSSVTGFGIEQLKDMLWNTL 327 >gi|68535634|ref|YP_250339.1| GTPase ObgE [Corynebacterium jeikeium K411] gi|260578296|ref|ZP_05846212.1| Spo0B-associated GTP-binding protein [Corynebacterium jeikeium ATCC 43734] gi|123651361|sp|Q4JWT6|OBG_CORJK RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|68263233|emb|CAI36721.1| putative GTP-binding protein [Corynebacterium jeikeium K411] gi|258603598|gb|EEW16859.1| Spo0B-associated GTP-binding protein [Corynebacterium jeikeium ATCC 43734] Length = 503 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 141/345 (40%), Positives = 214/345 (62%), Gaps = 14/345 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++++GDGG G S REKF+ GGPDGG+GG GGD+ ++ +S ++TL+DF + Sbjct: 3 QFVDRVVLHLQAGDGGHGCASVHREKFVPLGGPDGGNGGHGGDIILEVSSQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H KAQ G G +R GA+GED+VL VP GT V G I DL +G R+I+A GG Sbjct: 63 HPHIKAQRGNNGAGDHRHGARGEDLVLQVPEGTVVLNSKG-EAIADLTGKGTRMIVAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 +GG GNA S + +AP +A G G+ K + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 HGGLGNAALASKSRKAPGFALLGEPGEAKDVILELKSMADVGLVGFPSAGKSSLISVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G++ F +AD+PG+I A +G G+G FL+H ERT VL Sbjct: 182 AKPKIADYPFTTLVPNLGVVNVGHEVFTVADVPGLIPGASEGKGLGLDFLRHIERTAVLA 241 Query: 242 HIVSA----LEENVQAAYQCILDELSAYNSE---------LRKKIEIVGLSQIDTVDSDT 288 H+V A + + A + + EL+ Y E LR++ ++ L+++D D+ Sbjct: 242 HVVDAASLEADRDPVADIKALEKELANYQEELASDSGLGDLRERPRVIILNKMDVPDAAD 301 Query: 289 LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 +A + E + G F S++ G+ ++ L D + + R N Sbjct: 302 MADLQEEELKEFGWPIFRISTVAHKGLDELKYALMDIVKAHRKAN 346 >gi|148543890|ref|YP_001271260.1| GTP-binding protein Obg/CgtA [Lactobacillus reuteri DSM 20016] gi|184153290|ref|YP_001841631.1| GTP-binding protein [Lactobacillus reuteri JCM 1112] gi|227364798|ref|ZP_03848846.1| GTPase ObgE [Lactobacillus reuteri MM2-3] gi|325682577|ref|ZP_08162094.1| Spo0B-associated GTP-binding protein [Lactobacillus reuteri MM4-1A] gi|261266845|sp|A5VJ99|OBG_LACRD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266846|sp|B2G6R9|OBG_LACRJ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|148530924|gb|ABQ82923.1| GTP-binding protein Obg/CgtA [Lactobacillus reuteri DSM 20016] gi|183224634|dbj|BAG25151.1| GTP-binding protein [Lactobacillus reuteri JCM 1112] gi|227070142|gb|EEI08517.1| GTPase ObgE [Lactobacillus reuteri MM2-3] gi|324978416|gb|EGC15366.1| Spo0B-associated GTP-binding protein [Lactobacillus reuteri MM4-1A] Length = 438 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 144/331 (43%), Positives = 212/331 (64%), Gaps = 9/331 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ + +G GG G ++FRREK++ GGP GG GGRGG + ++ L TL+DFRY Sbjct: 4 FVDQIKIEVHAGKGGDGMVAFRREKYVPNGGPAGGDGGRGGSIILKVDEGLRTLMDFRYH 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++G GM + +G ED ++ VP GT V + D +I DL ++ Q +++A GG Sbjct: 64 RIFKAKNGGNGMSKQMTGPSAEDTIIAVPQGTTVRDLDTGKIIGDLVEKDQELVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S+ N AP A G G++ + L+LK++AD+G+IG P+ GKST L+ VT A Sbjct: 124 GGRGNIHFASAKNPAPEIAENGEPGEDHYLELELKMLADVGLIGFPSVGKSTLLSVVTGA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V ++F +AD+PG+I+ A +G G+G +FL+H ERT VLL Sbjct: 184 KPKIAAYEFTTLTPNLGMVMLPDGRDFAMADMPGLIEGASKGIGLGLKFLRHIERTRVLL 243 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H+V E+ A Y+ I EL+ Y+ EL K+ +IV +++D +S D LA K +LA Sbjct: 244 HLVDMSSEDPHQAIERYRQINKELADYDPELLKRPQIVVATKMDLPNSADNLAAFKADLA 303 Query: 298 TQ--CGQVP--FEFSSITGHGIPQILECLHD 324 + P F S++T G+ Q+++ D Sbjct: 304 ADKTLEKQPEIFPISAVTHQGVQQLMQLTAD 334 >gi|16800640|ref|NP_470908.1| GTPase ObgE [Listeria innocua Clip11262] gi|81853956|sp|Q92BH7|OBG_LISIN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|16414059|emb|CAC96803.1| lin1572 [Listeria innocua Clip11262] Length = 429 Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 211/329 (64%), Gaps = 7/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y+++G+GG G ++FRREKF+ GGP GG GG+G DV L TL+DFR++ Sbjct: 2 FVDQVKIYVKAGNGGDGMVAFRREKFVPNGGPAGGDGGKGADVVFVVDEGLRTLVDFRFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+HG+ GM ++ G ED+V+ VP GT V + D +I DL GQR ++A G Sbjct: 62 RIFKAEHGDHGMSKSMHGRGAEDLVVKVPQGTIVKDIDTGEIIADLVAHGQRAVIAKAGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNKRFATPANPAPELSENGEPGQERNVQLELKVLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA Y FTT+ PNLG+V G + F++AD+PG+I+ A QG G+G +FL+H ERT V++ Sbjct: 182 RPKIAAYHFTTIVPNLGMVDAGDGRSFVMADLPGLIEGASQGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALEENVQ-AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S E V Y I +EL YN L ++ +I+ +++D D+ + L K ++A Sbjct: 242 HVIDMSGSEGRVPYEDYMAINNELEQYNLRLMERPQIIVANKMDMPDAEENLKEFKTKIA 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI 326 P S++T G+ ++L + DK+ Sbjct: 302 EDIPVFP--ISAVTKTGLRELLLAIADKL 328 >gi|189485536|ref|YP_001956477.1| obg subfamily GTP-binding protein [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|261277730|sp|B1H0I4|OBG_UNCTG RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|170287495|dbj|BAG14016.1| obg subfamily GTP-binding protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 419 Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 148/340 (43%), Positives = 213/340 (62%), Gaps = 12/340 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ Y+ +G GG G ISFRREK++ +GGPDGG+GG GGD++ ++ + TL+D Y+ Sbjct: 2 FIDKVNTYLAAGRGGDGCISFRREKYVPYGGPDGGNGGNGGDIYFESDQHKTTLLDLSYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 FKA+ G+KG ++SG GED+++ +P+GT +F+ DL G+RI++ GG Sbjct: 62 PKFKAEDGQKGSSGDKSGRYGEDLIIKIPLGTLIFKNG--EFFADLKTVGERILIVKGGR 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA FK+ + P A G G+ + L+L+LIAD+G++GLPNAGKST L+ ++ A Sbjct: 120 GGRGNASFKTGRHTVPRIAEKGAPGETAEVNLELRLIADVGLLGLPNAGKSTLLSQISAA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V K F ADIPGII+ A++G G+G FL+H RT VL+H Sbjct: 180 KPKIADYPFTTLAPNLGVVNYKGKHFTAADIPGIIEGAYKGIGLGFEFLRHIRRTKVLIH 239 Query: 243 IVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 ++ + Y+ I +EL Y+ L KK I+ L++ID+ S L + KN Sbjct: 240 VIDVNGFDGRDPYENYKIINNELKKYSKHLAKKHVIIVLNKIDSAVS--LEQIKNFKKHL 297 Query: 300 CGQVPFEFSSITGHGI----PQILECLHDKI-FSIRGENE 334 + FE S+ TG+GI ++L L + FS GE E Sbjct: 298 KVKKLFETSAATGYGIDALLKEMLRMLEKPVAFSTEGEVE 337 >gi|260775531|ref|ZP_05884428.1| GTP-binding protein Obg [Vibrio coralliilyticus ATCC BAA-450] gi|260608712|gb|EEX34877.1| GTP-binding protein Obg [Vibrio coralliilyticus ATCC BAA-450] Length = 390 Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 143/287 (49%), Positives = 200/287 (69%), Gaps = 6/287 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA V +++GDGG G +SF REKF+ GGPDGG GG GGDV+IQA NLNTLID+R Sbjct: 1 MKFVDEAVVKVQAGDGGNGVVSFWREKFVAKGGPDGGDGGDGGDVYIQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ GE G N +G +G+D VL VPVGT+ + ++ ++ + G++I++A G Sbjct: 61 FQRFYEAERGENGRGGNCTGKRGKDKVLRVPVGTRAVDIHTNEIVAEVAEHGKKIMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTLGTKGEIREVRLELLLLADVGMLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 LLH++ + + VQ A I+DEL Y+ +L K + +++D Sbjct: 241 LLHMIDIMPIDQSDPVQNAL-TIIDELEQYSEKLADKPRWLIFNKVD 286 >gi|94986317|ref|YP_605681.1| GTPase ObgE [Deinococcus geothermalis DSM 11300] gi|261266816|sp|Q1IW72|OBG_DEIGD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|94556598|gb|ABF46512.1| GTP1/OBG family GTPase [Deinococcus geothermalis DSM 11300] Length = 433 Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 141/326 (43%), Positives = 210/326 (64%), Gaps = 4/326 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F D + + +G+GG G +SF R K++E GGPDGG GGRGG V ++A + +L Sbjct: 1 MAFRDVLDIEVAAGNGGDGSMSFHRAKYLEKGGPDGGHGGRGGSVILRAIEGVESLERLV 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ FKA +G G R R GA GED+ + VPVGT F+ D +I DL + GQ ++A G Sbjct: 61 GQRKFKAPNGAYGEGRLRQGADGEDLYIDVPVGTTAFDRDSGKVIADLVRVGQEKVIARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN+ F +ST QAP +A G G+++ + L+L+LIAD+G++G PNAGKS+ LA+++ Sbjct: 121 GLGGRGNSTFVTSTRQAPRFAELGTPGEKRRVRLELRLIADVGLVGYPNAGKSSLLAALS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 RA P IADYPFTTL P LG+V+ +G K F +ADIPGII+ A +G G+G FL+H RT Sbjct: 181 RANPAIADYPFTTLSPILGVVESADGEKRFTMADIPGIIEGASEGKGLGLEFLRHISRTR 240 Query: 239 VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 +L++++ + + Q + EL Y+ L + + ++ L++I+ VD+D A ++ELA Sbjct: 241 LLVYVLDVTRDPAEELRQ-LQTELRTYDPSLLENVALIALNKIELVDADLAAMVEDELA- 298 Query: 299 QCGQVPFEFSSITGHGIPQILECLHD 324 + G S+ TG G+P++ + L D Sbjct: 299 EFGLPVLPVSAKTGQGLPELRQALFD 324 >gi|330831005|ref|YP_004393957.1| GTPase obg [Aeromonas veronii B565] gi|328806141|gb|AEB51340.1| GTPase obg [Aeromonas veronii B565] Length = 400 Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 138/288 (47%), Positives = 198/288 (68%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE ++ + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEVQIRVDAGDGGNGCVSFRREKYIPNGGPDGGDGGDGGDVYLIADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ GE G N +G +G+D +L VPVGT+ +ED L+ DL Q++++A G Sbjct: 61 FERFHAAERGENGQSANCTGRRGKDKILRVPVGTRATDEDTGELLGDLTHHEQKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP + G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKSNGTPGEVRTLKLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V+ E + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AARPKVADYPFTTLVPNLGVVRGENSRSFVIADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTV 284 L+H+V + + I+ EL Y+ EL K + +++D + Sbjct: 241 LIHLVDICPVDGSDPAENAVTIVKELEKYSPELAGKPRWLVFNKMDLI 288 >gi|238916945|ref|YP_002930462.1| GTP-binding protein [Eubacterium eligens ATCC 27750] gi|238872305|gb|ACR72015.1| GTP-binding protein [Eubacterium eligens ATCC 27750] Length = 430 Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 139/337 (41%), Positives = 216/337 (64%), Gaps = 8/337 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D +++I+SG GG G +SFRRE ++ GGPDGG+GG GGD+ LNTL DFR+ Sbjct: 2 FADRVRIFIKSGKGGDGHVSFRRELYVPAGGPDGGNGGHGGDIIFMVDKGLNTLGDFRHN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + A+ GE+G KR +G GED+++ VP GT +++++ +I D+ + + + GG Sbjct: 62 SKYIAESGEEGGKRRCTGKDGEDLIIKVPEGTVIYDDESGKVIADMSGDNLQETILKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN ++ +ST QAP YA PG QE + L+LK+IAD+G++G PN GKSTFL+ VT A Sbjct: 122 GGKGNMNYATSTMQAPQYAQPGQDAQELWVRLELKVIADVGLVGFPNVGKSTFLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V +G K F++ADIPG+I+ A +G G+G +FL+H ERT V++ Sbjct: 182 RPKIANYHFTTLNPNLGVVDLDGGKGFVIADIPGLIEGASEGVGLGHQFLRHIERTKVII 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKNE 295 HIV A + A + I EL YN +L ++ +++ ++ID + SD + ++ Sbjct: 242 HIVDAASTEGRDPIADIKAINKELENYNPKLLERPQVIAANKIDVIYDDGSDPVQAIRDA 301 Query: 296 LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + +V + S++TG G+ ++L + + + + E Sbjct: 302 FEPEGIKV-YPISAVTGQGVKELLYAVRTLLDNFKDE 337 >gi|283797999|ref|ZP_06347152.1| Obg family GTPase CgtA [Clostridium sp. M62/1] gi|291074300|gb|EFE11664.1| Obg family GTPase CgtA [Clostridium sp. M62/1] gi|295091855|emb|CBK77962.1| Obg family GTPase CgtA [Clostridium cf. saccharolyticum K10] Length = 430 Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 152/329 (46%), Positives = 212/329 (64%), Gaps = 14/329 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AKVYIRSG GG G +SFRRE ++ GGPDGG GGRGGDV + LNTL DFR+ Sbjct: 2 FADSAKVYIRSGKGGDGHVSFRRELYVAAGGPDGGDGGRGGDVIFEVDDGLNTLTDFRHV 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + AQ GE G KR GA GED+++ VP GT + + + +I D+ + +R ++ GG Sbjct: 62 RKYAAQDGEPGGKRRCHGADGEDIIIKVPEGTVIKDFESGKVIADMSGDNRREVILKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST Q P YA PG QE + L+LK+IAD+G++G PN GKST L+ V+ A Sbjct: 122 GGLGNMHFATSTMQVPKYAQPGQPAQELWVQLELKVIADVGLVGFPNVGKSTLLSRVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PKIA+Y FTTL P+LG+V EG + F++ADIPG+I+ A QG G+G FLKH ERT VL Sbjct: 182 RPKIANYHFTTLNPHLGVVDLSEG-QGFVMADIPGLIEGASQGVGLGYSFLKHIERTKVL 240 Query: 241 LHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-------DSDTLA 290 +H+V A + A + I +EL AYN EL K+ +++ ++ID + + + + Sbjct: 241 VHVVDAASTEGRDPVADIKAINEELRAYNPELLKRPQVIAANKIDAIYVDPESGEENPVE 300 Query: 291 RKKNELATQCGQVPFEFSSITGHGIPQIL 319 R K + QV F S+++G G+ ++L Sbjct: 301 RLKKAFEPEGIQV-FAISAVSGQGVKELL 328 >gi|226941883|ref|YP_002796957.1| GTPase ObgE [Laribacter hongkongensis HLHK9] gi|226716810|gb|ACO75948.1| obgE, yhbZ, obg, cgtA [Laribacter hongkongensis HLHK9] Length = 371 Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 149/346 (43%), Positives = 223/346 (64%), Gaps = 20/346 (5%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + G GG G S RREKF+ GGPDGG GGRGG + A ++NTL+D+R Sbjct: 1 MKFIDEAKIEVAGGKGGNGSASMRREKFVPKGGPDGGDGGRGGSIVAIADKDINTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + + A+HGE G + G +DV+L +PVGT + ++D L+ DL +GQ +LA G Sbjct: 61 FVKRYLARHGENGRGADCYGKGADDVILRMPVGTVITDQDTGELVADLTHDGQTAVLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+++ + L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GKGGLGNIHFKSSTNRAPRQTTKGEEGEQRSLRLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ + + F++ADIPG+I+ A +GAG+G RFLKH +RT + Sbjct: 181 AARPKIADYPFTTLHPNLGVVRIDENQSFVIADIPGLIEGAAEGAGLGHRFLKHLQRTGL 240 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV + + +V A I++EL Y+ L K + L+++D + D ++ + Sbjct: 241 LLHIVDLAPFDSDVDPVAEAHAIIEELRKYDESLYAKPRWLVLNKLDMIPEDEREQRVAD 300 Query: 296 LATQCG-------------QVP--FEFSSITGHGIPQILECLHDKI 326 ++ G P F S++TG G ++ + + I Sbjct: 301 FLSRFGVDFTVDPLANYDPMQPRLFRISALTGEGTRELCYAVMEHI 346 >gi|152990976|ref|YP_001356698.1| GTP-binding protein Obg [Nitratiruptor sp. SB155-2] gi|261277705|sp|A6Q4D2|OBG_NITSB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|151422837|dbj|BAF70341.1| GTP-binding protein Obg [Nitratiruptor sp. SB155-2] Length = 367 Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 132/292 (45%), Positives = 194/292 (66%), Gaps = 2/292 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ + SG GG G +SFRREKF+ GGPDGG GG GG+V+ N +TL F+ + Sbjct: 2 FIDNVELTVHSGKGGQGAVSFRREKFVPKGGPDGGDGGDGGNVYFLVDKNTHTLSHFKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KAQ+G G R + G KGED++L VP GTQV++ LI DL ++GQ+++ GG Sbjct: 62 KVLKAQNGRPGEGRRKHGKKGEDLILIVPPGTQVYDAQSGELIFDLVEDGQKVLFLQGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKS++NQ P YA PG+ G+ I L+LKLIAD+G++G PN GKST +++++ A Sbjct: 122 GGKGNWHFKSASNQRPTYAQPGLPGKVVQIRLELKLIADVGLVGFPNVGKSTLISTISNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP++A+Y FTTL P LG+V+ ++ F++ADIPGII A +G G+G +FLKH ERT LL Sbjct: 182 KPEVANYEFTTLTPKLGVVRVSEFESFVMADIPGIIGGASEGKGLGLQFLKHIERTKSLL 241 Query: 242 HIVS-ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 +++ + + Y+ + EL ++ EL K+ + L++ID + D K Sbjct: 242 YMIDMSSYRDPLTQYKTLQKELKNFSEELAKRSFAIALTKIDALQEDEAKEK 293 >gi|194468446|ref|ZP_03074432.1| GTP-binding protein Obg/CgtA [Lactobacillus reuteri 100-23] gi|194453299|gb|EDX42197.1| GTP-binding protein Obg/CgtA [Lactobacillus reuteri 100-23] Length = 438 Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 144/331 (43%), Positives = 212/331 (64%), Gaps = 9/331 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ + +G GG G ++FRREK++ GGP GG GGRGG + ++ L TL+DFRY Sbjct: 4 FVDQIKIEVHAGKGGDGMVAFRREKYVPNGGPAGGDGGRGGSIILKVDEGLRTLMDFRYH 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++G GM + +G ED ++ VP GT V + D +I DL ++ Q +++A GG Sbjct: 64 RIFKAKNGGNGMSKQMTGPSAEDTIIAVPQGTTVRDLDTGEIIGDLVEKDQELVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S+ N AP A G G++ + L+LK++AD+G+IG P+ GKST L+ VT A Sbjct: 124 GGRGNIHFASAKNPAPEIAENGEPGEDHYLELELKMLADVGLIGFPSVGKSTLLSVVTGA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V ++F +AD+PG+I+ A +G G+G +FL+H ERT VLL Sbjct: 184 KPKIAAYEFTTLTPNLGMVMLPDGRDFAMADMPGLIEGASKGIGLGLKFLRHIERTRVLL 243 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H+V E+ A Y+ I EL+ Y+ EL K+ +IV +++D +S D LA K +LA Sbjct: 244 HLVDMSSEDPHQAIERYRQINKELANYDPELLKRPQIVVATKMDLPNSADNLATFKADLA 303 Query: 298 TQ--CGQVP--FEFSSITGHGIPQILECLHD 324 + P F S++T G+ Q+++ D Sbjct: 304 ADKTLEKQPEIFPISAVTHQGVQQLMQLTAD 334 >gi|255994051|ref|ZP_05427186.1| Obg family GTPase CgtA [Eubacterium saphenum ATCC 49989] gi|255993719|gb|EEU03808.1| Obg family GTPase CgtA [Eubacterium saphenum ATCC 49989] Length = 460 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 152/364 (41%), Positives = 221/364 (60%), Gaps = 37/364 (10%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+ +RSGDGG G ++FR ++ GGPDGG GG GG++ A L+TL+DF+Y+ Sbjct: 2 FIDRAKIKLRSGDGGNGAVTFRHAPYVPMGGPDGGDGGDGGNIIFLADEGLSTLMDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +++ A +GE G +R + G KGED+V+ VP+GT V ++ + DL + Q+++L GG Sbjct: 62 KNYVADNGENGRRRKQYGKKGEDLVIRVPIGTVVIDDATGRPMADLVRHNQKVLLLRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+S QAP + G G E + L LK+IAD+G++G PNAGKSTFL+ T A Sbjct: 122 GGKGNVHFKNSVRQAPNFGIAGGSGMEVTVILSLKMIADVGLVGFPNAGKSTFLSVTTSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKI +Y FTT+ PNLG+ + F +ADI GIIK A +GAG+GD FLKH ERT +LLH Sbjct: 182 KPKIGNYDFTTIAPNLGVASVYGESFTIADIAGIIKGASEGAGMGDAFLKHIERTRILLH 241 Query: 243 IVSAL--EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK-NELATQ 299 ++ A E ++ AY I EL A+N +L KK +IV ++++D +D L R+K + A Sbjct: 242 LIDASNPERDLYEAYLTINHELGAFNPKLLKKEQIVVVTKMDLLD---LTREKIRKEAMD 298 Query: 300 CG------------QVP-------------------FEFSSITGHGIPQILECLHDKIFS 328 G + P FE SS+ G+ ++L+ L +++ + Sbjct: 299 AGFSEDEADKIFKEEAPLEWAYFSFIEKMKEFDVKVFEVSSVKNEGVQEVLKYLLERLSN 358 Query: 329 IRGE 332 I E Sbjct: 359 IEKE 362 >gi|126662288|ref|ZP_01733287.1| GTPase ObgE [Flavobacteria bacterium BAL38] gi|126625667|gb|EAZ96356.1| GTPase ObgE [Flavobacteria bacterium BAL38] Length = 336 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 145/329 (44%), Positives = 211/329 (64%), Gaps = 6/329 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y+ SG GG G REKFIE GGPDGG GGRGG V+I+ NL TL ++ Sbjct: 6 FVDYVKIYVSSGKGGKGSSHLHREKFIEKGGPDGGDGGRGGHVFIKGNKNLWTLFHLKFL 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H +A HG G +G GED + VP+GT V +++ ++ ++ + + I+A GG Sbjct: 66 KHLRAGHGGDGGSSRSTGHDGEDKYIEVPLGTVVKDQETGDVLFEITEHDEVKIIAEGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +F+SSTNQ P YA PG+ +E + L+LK++AD+G++G PNAGKST L+ +T A Sbjct: 126 GGLGNWNFRSSTNQTPRYAQPGMPVKEVDVTLELKVLADVGLVGFPNAGKSTLLSVLTSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLGIV ++ F++ADIPGII+ A +G G+G FL+H ER LL Sbjct: 186 KPKIADYAFTTLKPNLGIVAYRDFQSFVMADIPGIIEGAAEGKGLGHYFLRHIERNSTLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V A ++++ Y+ +LDEL YN E+ K ++ +S+ D +D + A K +L + Sbjct: 246 FLVPADADDIKKEYEILLDELRRYNPEMLDKDRLIVISKCDMLDDELKAELKKQLDVEFK 305 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFSI 329 +P+ F SS+ G L+ L DK++ + Sbjct: 306 GMPYLFISSVAQQG----LQELKDKLWQM 330 >gi|258511780|ref|YP_003185214.1| GTP-binding protein Obg/CgtA [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478506|gb|ACV58825.1| GTP-binding protein Obg/CgtA [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 426 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 138/294 (46%), Positives = 207/294 (70%), Gaps = 5/294 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A +Y++ G+GG G +S+RREK++ GGP GG GGRGGDV + L TL+DFRYQ Sbjct: 2 FVDHAVIYVKGGNGGNGIVSWRREKYVPRGGPAGGDGGRGGDVVLVVDEGLRTLVDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE G NR GA GED+V+ VP GT V + D + DL + G R+++A GG Sbjct: 62 RHFKAKSGEPGGPANRHGADGEDLVIKVPPGTLVRDRDTGEFLGDLVRPGDRLVVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHF +S ++AP A G G+E++I L+L+++AD+G++G P+ GKST L ++TRA Sbjct: 122 GGRGNAHFANSVHKAPEIAEKGEPGEERVIELELRVLADVGLVGYPSVGKSTLLRAMTRA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PK+ YPFTTL+P LG+V+ + F++AD+PG+I+ AH+G G+G +FL+H ERT VL+ Sbjct: 182 EPKVGAYPFTTLHPELGVVELSDGRSFVMADLPGLIEGAHEGRGLGHQFLRHIERTKVLV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLAR 291 H++ +A++ + Y+ I DEL+ Y +EL + +V +++D D+ + LAR Sbjct: 242 HVIDMAAVDGRDPVEDYRIIEDELAKYRAELADRPRVVAANKMDLPDAQENLAR 295 >gi|254443731|ref|ZP_05057207.1| GTP-binding protein Obg/CgtA [Verrucomicrobiae bacterium DG1235] gi|198258039|gb|EDY82347.1| GTP-binding protein Obg/CgtA [Verrucomicrobiae bacterium DG1235] Length = 352 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 143/329 (43%), Positives = 205/329 (62%), Gaps = 8/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE ++ ++GDGG G ISFRREK+ FGGP+GG GG+GGDV ++ T+N N LI +R+Q Sbjct: 2 FVDETRIIAQAGDGGNGCISFRREKYEAFGGPNGGDGGKGGDVILEGTNNENNLIKYRFQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 QH+ A+ G+ GM +R G G+D VL VP+GT V + +I ++ + GQR+ + GGN Sbjct: 62 QHWDAEKGQNGMGSDRIGRCGKDAVLLVPLGTVVTDNLTGRVITEILEVGQRVRILKGGN 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GNA FKSS N+AP ANPG G++ L LK IAD+G++G PNAGKST +T A Sbjct: 122 GGWGNAKFKSSVNRAPRRANPGDPGEQGEFRLILKSIADVGLVGYPNAGKSTLTNMITNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PK+A YPFTTL+P +G+++ E Y +ADIPGII+ A + G+G RFL+H ER VL Sbjct: 182 RPKMAPYPFTTLHPGIGVIEYPERYARLQMADIPGIIEGASENRGLGHRFLRHIERCFVL 241 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +V E + Y ++ EL AY+ L +K IV +++ D + E Sbjct: 242 AILVDMSGIDERDPWDDYSQLIAELGAYDETLLEKPRIVLANKM---DEEKAEENLKEFL 298 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI 326 + S ++ GIP+ E L +K+ Sbjct: 299 KRHDVEVLPISCLSEEGIPEFKEVLWEKV 327 >gi|116872966|ref|YP_849747.1| GTPase ObgE [Listeria welshimeri serovar 6b str. SLCC5334] gi|123458493|sp|A0AIY6|OBG_LISW6 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|116741844|emb|CAK20968.1| GTP-binding protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 429 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 211/329 (64%), Gaps = 7/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y+++G+GG G ++FRREKF+ GGP GG GG+G DV L TL+DFR++ Sbjct: 2 FVDQVKIYVKAGNGGDGMVAFRREKFVPNGGPAGGDGGKGADVVFVVDEGLRTLVDFRFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+HGE GM ++ G ED+V+ VP GT V + D +I DL GQR ++A G Sbjct: 62 RIFKAEHGEHGMSKSMHGRGAEDLVVKVPQGTIVKDIDTGEIIADLVAHGQRAVIAKAGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNKRFATPANPAPELSENGEPGQERNVQLELKVLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA Y FTT+ PNLG+V G + F++AD+PG+I+ A QG G+G +FL+H ERT V++ Sbjct: 182 RPKIAAYHFTTIVPNLGMVDAGDGRSFVMADLPGLIEGASQGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALEENVQ-AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S E V Y I +EL YN L ++ +I+ +++D ++ + L K ++A Sbjct: 242 HVIDMSGSEGRVPYEDYMAINNELEQYNLRLMERPQIIVANKMDMPEAEENLKEFKTKIA 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI 326 P S++T G+ ++L + DK+ Sbjct: 302 EDIPVFP--ISAVTKTGLRELLLAIADKL 328 >gi|160880680|ref|YP_001559648.1| GTP-binding protein Obg/CgtA [Clostridium phytofermentans ISDg] gi|261266743|sp|A9KMF5|OBG_CLOPH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|160429346|gb|ABX42909.1| GTP-binding protein Obg/CgtA [Clostridium phytofermentans ISDg] Length = 429 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 143/334 (42%), Positives = 206/334 (61%), Gaps = 7/334 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK++IRSG GG G +SFRRE F+ GGPDGG GG+GG+V + LNTL DFR + Sbjct: 2 FADSAKIFIRSGKGGDGHVSFRREIFVPAGGPDGGDGGKGGNVIFEVDEGLNTLGDFRLK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A GE G K+ SG GED+++ VP GT + E + +I D+ E +R ++ GG Sbjct: 62 RKYSAGDGENGQKKRCSGKDGEDLIIKVPEGTIIKETETGKVITDMSHENRREVILRGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+ + T Q P YA PG E + L+LK+IAD+G++G PN GKST L+ VT A Sbjct: 122 GGKGNQHYATPTMQVPKYAQPGQKAMELNVTLELKVIADVGLVGFPNVGKSTLLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V +G F++ADIPG+I+ A +G G+G FLKH ERT V++ Sbjct: 182 KPKIANYHFTTLNPNLGVVDLDGADGFVIADIPGLIEGASEGIGLGHEFLKHIERTRVII 241 Query: 242 HIVSALEENVQAAYQCILD---ELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKNE 295 H+V A + + I ELS+YN L K +++ ++ D + + + K E Sbjct: 242 HLVDAASTEGRDPVEDIEKINHELSSYNEGLLLKPQVIAANKTDVLYGEEEEEAINKIKE 301 Query: 296 LATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 G F S+++G G+ ++L + D + ++ Sbjct: 302 AFESKGIKVFPISAVSGQGVKELLYYVSDLLKTV 335 >gi|291546188|emb|CBL19296.1| Obg family GTPase CgtA [Ruminococcus sp. SR1/5] Length = 430 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 143/325 (44%), Positives = 209/325 (64%), Gaps = 10/325 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D A++ IRSG GG G +SFRRE ++ GGPDGG GGRGGDV + NTL D+R++ Sbjct: 2 FADRARIIIRSGKGGDGHVSFRRELYVPNGGPDGGDGGRGGDVIFEIDEGQNTLGDYRHR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA+ G++G K+ GA G+DVVL VP GT + + + +I D+ E +R ++ GG Sbjct: 62 RKYKAEDGQEGGKKRCHGADGKDVVLKVPEGTVIMDAESGKVIADMSGENRRQVVLKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+ ++T Q P YA PG QE + L+LK+IAD+G++G PN GKSTFL+ VT A Sbjct: 122 GGKGNQHYATATMQVPKYAQPGQPAQELEVLLELKVIADVGLVGFPNVGKSTFLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIA+Y FTTL PNLG+V F++ADIPG+I+ A +G G+G FL+H ERT V++H Sbjct: 182 QPKIANYHFTTLSPNLGVVDTDNGGFVIADIPGLIEGASEGVGLGHEFLRHIERTRVIIH 241 Query: 243 IVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD----TLARKKN 294 IV A + V+ ++ I EL YN E+ + +++ ++ID + D + + K Sbjct: 242 IVDAASVEGRDPVEDIHK-INKELEVYNPEIAARPQVIAANKIDCIFDDGEESPIDQLKA 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQIL 319 E Q V + S++TG G+ ++L Sbjct: 301 EFEPQGISV-YPISAVTGQGVRELL 324 >gi|253682281|ref|ZP_04863078.1| Obg family GTPase CgtA [Clostridium botulinum D str. 1873] gi|253561993|gb|EES91445.1| Obg family GTPase CgtA [Clostridium botulinum D str. 1873] Length = 424 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 148/324 (45%), Positives = 216/324 (66%), Gaps = 7/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK++++SG GG G ISFRREK++ GGPDGG GG GG+V + A NL TL+DF Y Sbjct: 2 FIDTAKIFVKSGKGGNGCISFRREKYVSMGGPDGGDGGNGGNVILIADRNLTTLLDFTYH 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A +G+ G G KGED+ + VPVGT V + + ++ DL +EG ++A GG Sbjct: 62 RKFVADNGQDGSGSKCFGKKGEDLYIKVPVGTVVKDFESNKIMIDLSKEGDTYVVAKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + T QAP +A PG+ G+E++I+L++KL+AD+G++G PN GKST L+ V++A Sbjct: 122 GGKGNYHFATPTRQAPNFAEPGMPGEERMIFLEIKLLADVGLLGFPNVGKSTLLSMVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+VK EG F++ADIPGII+ A +G G+G FL+H ERT +L+ Sbjct: 182 KPKIANYHFTTLKPNLGVVKIEGANAFVMADIPGIIEGASEGVGLGLDFLRHIERTRLLV 241 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNEL 296 H+V S LE E ++ ++ I DEL Y+ +L + +IV ++ D + D + K E+ Sbjct: 242 HVVDISGLEGREPIE-DFKKINDELKNYSVKLWDRPQIVVANKSDMLYDEEIFENFKKEV 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILE 320 F+ S+ T G+ +++ Sbjct: 301 NKMGFDKVFKISAATRAGVDDLIK 324 >gi|300172827|ref|YP_003771992.1| GTP-binding protein [Leuconostoc gasicomitatum LMG 18811] gi|299887205|emb|CBL91173.1| GTP-binding protein [Leuconostoc gasicomitatum LMG 18811] Length = 439 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 142/336 (42%), Positives = 217/336 (64%), Gaps = 11/336 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D+A++ +++G GG G +SFR EKF+ GGP GG GGRGG + + L TL+DFR Sbjct: 1 MAFVDQAEIEVKAGKGGDGIVSFRHEKFVAMGGPFGGDGGRGGSIIFKVDEGLRTLMDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HFKAQ G G + +GA ED + VP GT V + D ++ DL + GQ +++A G Sbjct: 61 YNRHFKAQPGGNGGTKGMTGASSEDRYIKVPQGTTVKDADTGEVLGDLLENGQELLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF +S N AP + G G + + L+LK++AD+G++G P+AGKST L+ V+ Sbjct: 121 GRGGRGNIHFATSANPAPELSENGEPGIIRNLKLELKVLADVGLVGFPSAGKSTLLSVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+A Y FTTL PN+G+V+ + ++F++AD+PG+I+ A QG G+G +FL+H ERT V Sbjct: 181 NAKPKVAAYHFTTLSPNIGMVRLDDERDFVMADLPGLIEGASQGIGLGFQFLRHVERTKV 240 Query: 240 LLHIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKKNE 295 +LH+V S +E + Y+ ILDEL Y+ + + +IV +++D DSD LA+ + E Sbjct: 241 VLHLVDMSGVEGTDPYTQYRKILDELQQYDETILDRPQIVVPTKMDMPDSDENLAKFQKE 300 Query: 296 LATQCGQVPFE-----FSSITGHGIPQILECLHDKI 326 +A + G +P + S++T G +++ D + Sbjct: 301 IAAESG-LPVQPMIVPISALTREGTQELMRLTADML 335 >gi|269137750|ref|YP_003294450.1| putative GTP-binding protein [Edwardsiella tarda EIB202] gi|267983410|gb|ACY83239.1| putative GTP-binding protein [Edwardsiella tarda EIB202] gi|304557807|gb|ADM40471.1| GTP-binding protein Obg [Edwardsiella tarda FL6-60] Length = 392 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 136/305 (44%), Positives = 206/305 (67%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA ++I +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEAVIHIEAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT++ + D ++ D+ + Q++++ G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGQDVTIKVPVGTRITDVDTGEVLGDMTRHQQKLMVGKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRDLSLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFL+H ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEKSFVVADIPGLIEGASEGAGLGIRFLRHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ E + + I+ EL Y+ +L +K + ++ D + + + + Sbjct: 241 LLHLIDLAPIDESDPVENARVIIGELEKYSEKLAQKPRWLVFNKTDLLAPEEAKARAQAI 300 Query: 297 ATQCG 301 A G Sbjct: 301 ADALG 305 >gi|302335652|ref|YP_003800859.1| GTP-binding protein Obg/CgtA [Olsenella uli DSM 7084] gi|301319492|gb|ADK67979.1| GTP-binding protein Obg/CgtA [Olsenella uli DSM 7084] Length = 468 Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 137/338 (40%), Positives = 210/338 (62%), Gaps = 10/338 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D ++ ++ GDGGAG +SFRRE F+ GGPDGG GG GG V ++A L++LID+R++ Sbjct: 6 FTDLCRINVKGGDGGAGCMSFRREAFVPKGGPDGGDGGNGGSVILEADPQLSSLIDYRFK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISL-----ICDLDQEGQRIIL 117 HF+A+ G R G+ G+D+VL VP+GT V E D ++ I DL GQR+++ Sbjct: 66 HHFRAERATHGRGARRHGSDGKDLVLRVPLGTVVRELDPETMEPAFDIADLTHAGQRVVV 125 Query: 118 APGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 APGG GG GN HF +S +AP +A G +E I L++KL+AD ++G+P+ GKS+ +A Sbjct: 126 APGGMGGRGNIHFVTSVRRAPAFAEKGEPAREHWIELEMKLMADAALVGMPSVGKSSLIA 185 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTER 236 ++ A+PKIADYPFTTL PNLG+V+ F++AD+PG+I+ A +G G+G FL+H ER Sbjct: 186 RLSAARPKIADYPFTTLAPNLGMVRSRTGASFVVADVPGLIEGASEGRGLGHEFLRHIER 245 Query: 237 THVLLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 T ++LH+V + + Y+ I EL AY SEL + +IV ++ D + + Sbjct: 246 TALILHVVDMTGGYEQRDAIEDYEAINAELKAYASELADRPQIVVANKCDMPGTGGSIER 305 Query: 293 KNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +A + + F S+ TG G+ ++ ++ ++R Sbjct: 306 LRAVAERDARPFFAVSAATGMGLAELTTRCALEVAALR 343 >gi|227529066|ref|ZP_03959115.1| GTP-binding protein [Lactobacillus vaginalis ATCC 49540] gi|227351078|gb|EEJ41369.1| GTP-binding protein [Lactobacillus vaginalis ATCC 49540] Length = 460 Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 142/332 (42%), Positives = 215/332 (64%), Gaps = 11/332 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +G GG G +SFRREK++ GGP GG GG GG++ ++ L TL+DFRY Sbjct: 27 FVDQIKIEAHAGKGGNGMVSFRREKYVPNGGPSGGDGGHGGNIVLKVDEGLRTLMDFRYH 86 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++G GM + +G ED V++VP GT V + D +I DL + Q +++A GG Sbjct: 87 RIFKAKNGGNGMSKQMTGPSAEDTVISVPQGTTVRDLDTGKIIGDLVENDQTLVVAKGGR 146 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S+ N AP A G GQ++ + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 147 GGRGNIHFASAKNPAPEIAENGEPGQDRYLELELKMLADVGLVGFPSVGKSTLLSVVTGA 206 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+I+ A +G G+G +FL+H ERT VL Sbjct: 207 KPKIAAYEFTTLVPNLGMVLLPDG-RDFAMADMPGLIEGASKGVGLGLKFLRHIERTRVL 265 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKKNEL 296 LH+V ++ + A ++ I EL+ Y+ EL K+ +IV +++D +++ LA K +L Sbjct: 266 LHLVDMSSDDPKQAIERFKKINHELANYDPELLKRPQIVVATKMDLPNAEKNLAAFKKDL 325 Query: 297 ATQ--CGQVP--FEFSSITGHGIPQILECLHD 324 A + P F S++T G+ Q+++ D Sbjct: 326 AADKTLAKQPEIFPISAVTHQGVQQLMQLTAD 357 >gi|331270032|ref|YP_004396524.1| GTP-binding protein Obg/CgtA [Clostridium botulinum BKT015925] gi|329126582|gb|AEB76527.1| GTP-binding protein Obg/CgtA [Clostridium botulinum BKT015925] Length = 424 Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 145/323 (44%), Positives = 214/323 (66%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK++++SG GG G ISFRREK++ GGPDGG GG GG+V + A NL TL+DF Y Sbjct: 2 FIDTAKIFVKSGKGGNGCISFRREKYVSMGGPDGGDGGNGGNVILVADRNLTTLLDFTYH 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A +G+ G G KGED+ + VPVGT V + + ++ DL +EG ++A GG Sbjct: 62 RKFVADNGQDGSGSKCFGKKGEDLYIKVPVGTVVKDFESNKIMIDLSKEGDTYVVAKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + T QAP +A PG+ G+E++I+L++KL+AD+G++G PN GKST L+ V++A Sbjct: 122 GGKGNYHFATPTRQAPNFAEPGMPGEERMIFLEIKLLADVGLLGFPNVGKSTLLSMVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG++K EG F++ADIPGII+ A +G G+G FL+H ERT +L+ Sbjct: 182 RPKIANYHFTTLKPNLGVIKIEGANAFVMADIPGIIEGASEGVGLGLDFLRHIERTRLLV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H+V S LE + ++ I DEL Y+ +L + +IV ++ D + D + K E+ Sbjct: 242 HVVDISGLEGRDPIEDFKKINDELKNYSVKLWDRPQIVVANKSDMLYDEEVFENFKKEVN 301 Query: 298 TQCGQVPFEFSSITGHGIPQILE 320 F+ S+ T G+ +++ Sbjct: 302 KMGFDKVFKISAATRSGVDDLIK 324 >gi|218290846|ref|ZP_03494915.1| GTP-binding protein Obg/CgtA [Alicyclobacillus acidocaldarius LAA1] gi|218239204|gb|EED06405.1| GTP-binding protein Obg/CgtA [Alicyclobacillus acidocaldarius LAA1] Length = 426 Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 145/329 (44%), Positives = 217/329 (65%), Gaps = 8/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A +Y++ G+GG G +S+RREK++ GGP GG GGRGGDV + L TL+DFRYQ Sbjct: 2 FVDHAVIYVKGGNGGNGIVSWRREKYVPRGGPAGGDGGRGGDVVLVVDEGLRTLVDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE G NR GA GED+V+ VP GT V + D + DL G R+++A GG Sbjct: 62 RHFKAKSGEPGGTANRHGADGEDLVIKVPPGTIVRDRDTGEFLGDLVHPGDRLVVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHF +S +AP A G G+E++I L+L+++AD+G++G P+ GKST L ++TRA Sbjct: 122 GGRGNAHFANSVRKAPEIAEKGEPGEERVIELELRVLADVGLVGYPSVGKSTLLRAMTRA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PK+ YPFTTL+P LG+V+ + F++AD+PG+I+ AH+G G+G +FL+H ERT VL+ Sbjct: 182 EPKVGAYPFTTLHPELGVVELSDGRSFVMADLPGLIEGAHEGRGLGHQFLRHIERTKVLV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ +A++ + Y+ I DEL+ Y +EL + +V +++D D+ + LAR + A Sbjct: 242 HVIDMAAVDGRDPVEDYRIIEDELAKYRAELVDRPRVVAANKMDLPDAQENLARFR---A 298 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI 326 F S T G+ E L++ + Sbjct: 299 AYPDLEVFPISGATHQGLQPFAERLYELV 327 >gi|167630746|ref|YP_001681245.1| spo0b-associated GTP-binding protein [Heliobacterium modesticaldum Ice1] gi|261266829|sp|B0TBW1|OBG_HELMI RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|167593486|gb|ABZ85234.1| spo0b-associated GTP-binding protein [Heliobacterium modesticaldum Ice1] Length = 442 Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 148/327 (45%), Positives = 215/327 (65%), Gaps = 9/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+A+++++ GDGG G +SFRREK++ GGP+GG GG GG+V L TL+DFRYQ Sbjct: 2 FYDQARIFVKGGDGGNGIVSFRREKYVPEGGPNGGDGGDGGNVIFIGDEGLRTLVDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KA+ GE GM +N G G+D+ + VP+GT V + + ++ D+ +GQ+ I A GG Sbjct: 62 RHYKAERGEHGMGKNMHGRNGQDMTVRVPIGTVVKDAETGKILVDITCDGQQYIAARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F SSTN+ P A G G+E + L+LKL+AD+G++G PN GKST +ASV+ A Sbjct: 122 GGRGNAKFVSSTNRVPLIAEKGEPGEEHWLELELKLLADVGLVGFPNVGKSTLIASVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PKIA+Y FTTL PNLG+V+ EG + F++ADIPG+I+ AH GAG+G FL+HTERT L Sbjct: 182 RPKIANYHFTTLEPNLGVVRIAEG-QSFVMADIPGLIEGAHTGAGLGHDFLRHTERTRYL 240 Query: 241 LHI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 +H+ +S E + Y I EL+ Y EL K ++ +++D + + LAR + +L Sbjct: 241 IHVLDISGSEGRDPLEDYDAINRELALYKPELADKPMVIAANKMDLPGAEENLARLREKL 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLH 323 G V F S+ T G+ ++ +H Sbjct: 301 GE--GAVIFPISAATRQGLEPLIYHVH 325 >gi|86148129|ref|ZP_01066429.1| GTP1/Obg family protein [Vibrio sp. MED222] gi|218708403|ref|YP_002416024.1| GTPase ObgE [Vibrio splendidus LGP32] gi|261277746|sp|B7VID5|OBG_VIBSL RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|85834116|gb|EAQ52274.1| GTP1/Obg family protein [Vibrio sp. MED222] gi|218321422|emb|CAV17372.1| GTP1/Obg family protein [Vibrio splendidus LGP32] Length = 390 Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 142/306 (46%), Positives = 204/306 (66%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA V I +GDGG G +SF REKF+ GGPDGG GG GGDV+IQA NLNTLID+R Sbjct: 1 MKFVDEASVKIEAGDGGNGTVSFWREKFVAKGGPDGGDGGDGGDVYIQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ + A+ GE G N +G +G+D+ + VPVGT+ + ++ ++ + G+++++ G Sbjct: 61 FQRFYNAERGENGRGGNCTGKRGKDMTMKVPVGTRAVDIHTNEIVAEVAEHGKKVMVGKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTMGTKGEVRELRLELLLLADVGMLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ L + +Q A I+DEL Y+ ++ +K + +++D + + K E Sbjct: 241 LLHMIDILPIDGSDPIQNAL-TIIDELEQYSEKVAQKPRWLVFNKVDLMPEEEADEKIQE 299 Query: 296 LATQCG 301 + G Sbjct: 300 IVEALG 305 >gi|84393703|ref|ZP_00992453.1| GTP1/Obg family protein [Vibrio splendidus 12B01] gi|84375702|gb|EAP92599.1| GTP1/Obg family protein [Vibrio splendidus 12B01] Length = 391 Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 142/306 (46%), Positives = 204/306 (66%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA V I +GDGG G +SF REKF+ GGPDGG GG GGDV+IQA NLNTLID+R Sbjct: 1 MKFVDEASVKIEAGDGGNGTVSFWREKFVAKGGPDGGDGGDGGDVYIQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ + A+ GE G N +G +G+D+ + VPVGT+ + ++ ++ + G+++++ G Sbjct: 61 FQRFYNAERGENGRGGNCTGKRGKDMTMKVPVGTRAVDIHTNEIVAEVAEHGKKVMVGKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTMGTKGEVRELRLELLLLADVGMLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ L + +Q A I+DEL Y+ ++ +K + +++D + + K E Sbjct: 241 LLHMIDILPIDGSDPIQNAL-TIIDELEQYSEKVAQKPRWLVFNKVDLMPEEEADEKIQE 299 Query: 296 LATQCG 301 + G Sbjct: 300 IVEALG 305 >gi|169824064|ref|YP_001691675.1| putative GTP-binding protein [Finegoldia magna ATCC 29328] gi|303235271|ref|ZP_07321889.1| Obg family GTPase CgtA [Finegoldia magna BVS033A4] gi|261266790|sp|B0S3Z4|OBG_FINM2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|167830869|dbj|BAG07785.1| putative GTP-binding protein [Finegoldia magna ATCC 29328] gi|302493585|gb|EFL53373.1| Obg family GTPase CgtA [Finegoldia magna BVS033A4] Length = 421 Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 143/333 (42%), Positives = 214/333 (64%), Gaps = 4/333 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+ +++G GG G ++FRREK+ GGP GG GG GG + I ++ TL+D+ Y+ Sbjct: 2 FIDVAKIELKAGKGGDGSVAFRREKYEPSGGPAGGDGGDGGSIIIVGDKDIKTLMDYSYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +KA+ G G + + G KGED++L VPVGT V + D ++I D+ + + ++ GG Sbjct: 62 SIYKAESGGDGRNKKQFGKKGEDLILKVPVGTLVKDYDTDTVIYDVKHDKEEFVICKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSS QAP +A PG G+EK I L+LKL+AD+G+IGLPN GKST L+ ++ A Sbjct: 122 GGKGNVHFKSSIRQAPRFAEPGEKGEEKTIKLELKLLADVGLIGLPNVGKSTLLSIMSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIA+Y FTTL PNLG+ K G K F+LADIPG+I+ A +G G+G FLKH ERT +L+H Sbjct: 182 RPKIANYHFTTLEPNLGVCKVGEKSFVLADIPGLIEGASEGLGLGHDFLKHIERTKILVH 241 Query: 243 I--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 + +S E N ++ I ELS+YN +L K +V L++ D D + + + + + Sbjct: 242 VLDISGSEGRNPIEDFELINSELSSYNIKLNDKKMLVVLNKTDLGAEDNIKEFREKYSDK 301 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 ++ E S+ T + +++ + D + SI + Sbjct: 302 VDEI-VEISAATTENVDKLMYLIADTLDSIEDD 333 >gi|209693966|ref|YP_002261894.1| GTPase ObgE [Aliivibrio salmonicida LFI1238] gi|261266645|sp|B6EL43|OBG_ALISL RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|208007917|emb|CAQ78048.1| putative GTP-binding protein [Aliivibrio salmonicida LFI1238] Length = 392 Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 147/331 (44%), Positives = 213/331 (64%), Gaps = 8/331 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SF REKF+ GGPDGG GG GGDV+++A NLNTLID+R Sbjct: 1 MKFVDEATIKVDAGDGGNGTVSFWREKFVAKGGPDGGDGGDGGDVYLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + + A+ G+ G N +G +GED+ L VPVGT+ + D + +L G +I++A G Sbjct: 61 FNRFYDAERGKNGGGTNSTGRRGEDITLKVPVGTRAIDIDTGEKVAELMAHGMKIMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTMGTKGEVRELRLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ G K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVRARGNKSFVIADIPGLIEGAAEGAGLGVRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ L + VQ A I+DEL Y+ ++ K + ++ D + K E Sbjct: 241 LLHVIDILPIDGSDPVQNAL-TIIDELERYSEKVAGKPRWLLFNKTDLLLEAEADEKIAE 299 Query: 296 L--ATQCGQVPFEFSSITGHGIPQILECLHD 324 + A F+ ++++ G ++ L D Sbjct: 300 ILEALAWEGAHFKIAAVSRTGTQEVCNELSD 330 >gi|291528886|emb|CBK94472.1| Obg family GTPase CgtA [Eubacterium rectale M104/1] Length = 427 Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 143/325 (44%), Positives = 212/325 (65%), Gaps = 10/325 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+ I+SG GG G +SFRREK++ GGPDGG GG+GGDV +NTL D+R++ Sbjct: 2 FADRAKIIIKSGKGGDGHVSFRREKYVPNGGPDGGDGGKGGDVIFLVDKGINTLTDYRHR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A+ G++G K+N G GED++L VP GT + + +I D+ + R ++ GG Sbjct: 62 RKFAAEPGQEGGKKNCHGKNGEDLILKVPEGTLIKDAASGKVIADMSGDNTRQVILRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+ +ST QAP YA PG E + L+LK+IAD+G++G PN GKST L+ VT A Sbjct: 122 GGQGNQHYATSTMQAPKYAQPGQDAIEIEVQLELKVIADVGLVGFPNVGKSTLLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PKIA+Y FTTL PNLG+V EG+ F++ADIPG+I+ A +G G+G FL+H ERT V+ Sbjct: 182 QPKIANYHFTTLQPNLGVVDMDEGFG-FVIADIPGLIEGASEGIGLGHEFLRHIERTKVM 240 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKN 294 +H+V A + A + I EL AYN +L KK +++ ++ID + +++ ++ + Sbjct: 241 IHMVDAAGTEGRDPVADIKAINKELEAYNPQLLKKPQVIAANKIDAIAGDENEVISALRA 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQIL 319 E Q +V F S+++G G+ ++L Sbjct: 301 EFEPQGIKV-FPISAVSGKGLKELL 324 >gi|242046856|ref|XP_002461174.1| hypothetical protein SORBIDRAFT_02g042350 [Sorghum bicolor] gi|241924551|gb|EER97695.1| hypothetical protein SORBIDRAFT_02g042350 [Sorghum bicolor] Length = 745 Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 138/324 (42%), Positives = 204/324 (62%), Gaps = 1/324 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+ D AK++ ++GDGG G ++FRREK++ +GGP GG GGRGGDV++Q +N+L+ FR Sbjct: 287 MRCFDTAKIFAKAGDGGNGVVAFRREKYVPYGGPSGGDGGRGGDVYVQVDGEMNSLLPFR 346 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 HF+A G GM + ++GAKGEDVV+ VP GT V DG + +L + GQR +L PG Sbjct: 347 KSVHFRAGRGAHGMGQQQAGAKGEDVVVKVPPGTVVRTSDGGVELLELMRPGQRALLLPG 406 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FKS N+ P A G G E + L+LKL+AD+GI+G PNAGKST L+ ++ Sbjct: 407 GRGGRGNAAFKSGANKVPRIAEKGEKGPEMWLELELKLVADVGIVGAPNAGKSTLLSVIS 466 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKP IA+YPFTTL PNLG+V + ++AD+PG+++ AH+G G+G FL+H+ER V Sbjct: 467 AAKPAIANYPFTTLLPNLGVVSLDFDATMVVADLPGLLEGAHRGYGLGHEFLRHSERCSV 526 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V + + ++ + EL ++ L K +V +++D ++ E Sbjct: 527 LVHVVDGSAQQPEYEFEAVRLELELFSPSLVDKPYVVVFNKMDLPEASERWNTFREKVQS 586 Query: 300 CGQVPFEFSSITGHGIPQILECLH 323 G PF S+I G+ ++ + Sbjct: 587 EGIEPFCISAINRQGMQDVIHAAY 610 >gi|297587667|ref|ZP_06946311.1| obg family GTPase CgtA [Finegoldia magna ATCC 53516] gi|297574356|gb|EFH93076.1| obg family GTPase CgtA [Finegoldia magna ATCC 53516] Length = 421 Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 142/333 (42%), Positives = 214/333 (64%), Gaps = 4/333 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+ +++G GG G ++FRREK+ GGP GG GG GG + I ++ TL+D+ Y+ Sbjct: 2 FIDVAKIELKAGKGGDGSVAFRREKYEPSGGPAGGDGGDGGSIIIVGDKDIKTLMDYSYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +KA+ G G + + G KGED++L VPVGT V + D ++I D+ + + ++ GG Sbjct: 62 SIYKAESGGDGRNKKQFGKKGEDLILKVPVGTLVKDYDTDTVIYDVKHDKEEFVICKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSS QAP +A PG G+EK I L+LKL+AD+G+IGLPN GKST L+ ++ A Sbjct: 122 GGKGNVHFKSSIRQAPRFAEPGTKGEEKTIKLELKLLADVGLIGLPNVGKSTLLSIMSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIA+Y FTTL PNLG+ K G K F+LADIPG+I+ A +G G+G FLKH ERT +L+H Sbjct: 182 RPKIANYHFTTLEPNLGVCKVGEKSFVLADIPGLIEGASEGLGLGHDFLKHIERTKILVH 241 Query: 243 I--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 + +S E N ++ I EL++YN +L K +V L++ D D + + + + + Sbjct: 242 VLDISGSEGRNPIEDFELINSELASYNIKLNDKKMLVVLNKTDLGAEDNIKEFREKYSDK 301 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 ++ E S+ T + +++ + D + SI + Sbjct: 302 VDEI-VEISAATTENVDKLMYLIADTLDSIEDD 333 >gi|325105053|ref|YP_004274707.1| GTP-binding protein Obg/CgtA [Pedobacter saltans DSM 12145] gi|324973901|gb|ADY52885.1| GTP-binding protein Obg/CgtA [Pedobacter saltans DSM 12145] Length = 331 Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 146/329 (44%), Positives = 207/329 (62%), Gaps = 7/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ RSG+GGAG R+ GGPDGG GGRGG V ++ + L TL+ +Y+ Sbjct: 7 FVDYVKICGRSGNGGAGSAHLHRDVRTAKGGPDGGDGGRGGHVIVRGNAQLWTLLHLKYR 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G ++G G D +L VP+GT + + ++ ++ ++G+ IL GG Sbjct: 67 KHVIAEHGMSGGSALKTGRDGNDEILEVPLGTVAKDAETGEVLFEITKDGEEKILVKGGR 126 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKS TNQ P +A PG G E+ L+LK++AD+G++G PNAGKST L+ +T A Sbjct: 127 GGLGNWHFKSPTNQTPRFAQPGEKGLEEWKVLELKVLADVGLVGFPNAGKSTLLSVITAA 186 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+I DYPFTT+ PNLGIV G K FI+ADIPGII+ A QG G+G RFL+H ER VLL Sbjct: 187 KPEIGDYPFTTIVPNLGIVSYRGGKSFIVADIPGIIEGASQGKGLGFRFLRHIERNSVLL 246 Query: 242 HIVSA-LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +V A ++ Y+ +L ELSAYN EL K +I+ +++ D +D + A K +L Sbjct: 247 FMVPADTGRTIKEEYEILLAELSAYNEELLHKPKILAITKSDMLDEELEAEMKKDLP--- 303 Query: 301 GQVPFEF-SSITGHGIPQILECLHDKIFS 328 +P+ F SS+ G+ ++ + L I S Sbjct: 304 -DLPYVFISSVAQKGLTELKDLLWKAINS 331 >gi|282855684|ref|ZP_06264993.1| Obg family GTPase CgtA [Pyramidobacter piscolens W5455] gi|282586484|gb|EFB91743.1| Obg family GTPase CgtA [Pyramidobacter piscolens W5455] Length = 433 Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 132/323 (40%), Positives = 205/323 (63%), Gaps = 3/323 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 +KF+D ++++++G GG G +SFRREKFI GGPDGG+GG GG V ++A NL TL D++ Sbjct: 4 LKFVDLVRIHVKAGHGGDGCVSFRREKFIPKGGPDGGNGGNGGSVVVEAAQNLLTLADYQ 63 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F A+ G G GA G+D+ + VP GT V++ + + DL + G R ++A G Sbjct: 64 YTRRFAAERGLSGSGALCYGANGKDLTIYVPCGTAVYDAGTDAPLADLVEPGDRCVVARG 123 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAHF SS +AP ++ G G+E+ + +LK+IAD+ ++GLPNAGKS+ L +++ Sbjct: 124 GRGGKGNAHFASSQRRAPRFSEKGEAGEERDVKFELKMIADVALVGLPNAGKSSLLKAIS 183 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PKIA YPFTTL PNLG++ ++ ILAD+PG+I+ AH+ G+G FL+H ERT V Sbjct: 184 NANPKIAGYPFTTLTPNLGVLAVDDQKIILADVPGLIEGAHENKGLGLYFLRHIERTRVN 243 Query: 241 LHIVSALEEN---VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +H++ E N + + +LDE Y + L ++ ++ L+++D + D + R+ E Sbjct: 244 VHVLDLSEGNFDTILNQWNVVLDEFRHYGAGLAERPGVIALNKVDLLADDGVVRQLREFF 303 Query: 298 TQCGQVPFEFSSITGHGIPQILE 320 G S++ G GI +++ Sbjct: 304 AAKGLQTIVTSAVRGDGIEDLID 326 >gi|332531714|ref|ZP_08407599.1| GTP-binding protein Obg [Pseudoalteromonas haloplanktis ANT/505] gi|332038690|gb|EGI75132.1| GTP-binding protein Obg [Pseudoalteromonas haloplanktis ANT/505] Length = 385 Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 147/308 (47%), Positives = 210/308 (68%), Gaps = 6/308 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE ++ +GDGG+G +SFRREK++ GGPDGG GG GG V++QA NLNTLID++ Sbjct: 1 MKFVDEVEIRAEAGDGGSGIVSFRREKYVPDGGPDGGDGGDGGSVYLQADENLNTLIDYQ 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ +A+ G G RN +G K +D+ + VPVGT++ + D + DL Q GQRI++A G Sbjct: 61 FERFHRAERGTNGRSRNCTGRKADDLFVMVPVGTRIMDVDTQEGLGDLTQHGQRILVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSSTN+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GFHGLGNARFKSSTNRAPRQKTLGTPGEVRNLKLELLLLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V+ E K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AARPKVADYPFTTLIPNLGVVRPEANKSFVIADIPGLIEGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALEEN----VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHI+ + + V A+ I++EL Y+ +L +K + ++ID + D Sbjct: 241 LLHIIDVMPVDGSNPVDNAF-SIINELHQYSPKLAEKPRWLVFNKIDLLPEDEAKALCES 299 Query: 296 LATQCGQV 303 +A + G+ Sbjct: 300 IAEELGET 307 >gi|238924058|ref|YP_002937574.1| GTP1/OBG subdomain containing protein [Eubacterium rectale ATCC 33656] gi|238875733|gb|ACR75440.1| GTP1/OBG subdomain containing protein [Eubacterium rectale ATCC 33656] Length = 437 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 143/325 (44%), Positives = 212/325 (65%), Gaps = 10/325 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+ I+SG GG G +SFRREK++ GGPDGG GG+GGDV +NTL D+R++ Sbjct: 12 FADRAKIIIKSGKGGDGHVSFRREKYVPNGGPDGGDGGKGGDVIFLVDKGINTLTDYRHR 71 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A+ G++G K+N G GED++L VP GT + + +I D+ + R ++ GG Sbjct: 72 RKFAAEPGQEGGKKNCHGKNGEDLILKVPEGTLIKDAASGKVIADMSGDNTRQVILRGGK 131 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+ +ST QAP YA PG E + L+LK+IAD+G++G PN GKST L+ VT A Sbjct: 132 GGQGNQHYATSTMQAPKYAQPGQDAIEIEVQLELKVIADVGLVGFPNVGKSTLLSRVTNA 191 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PKIA+Y FTTL PNLG+V EG+ F++ADIPG+I+ A +G G+G FL+H ERT V+ Sbjct: 192 QPKIANYHFTTLQPNLGVVDMDEGFG-FVIADIPGLIEGASEGIGLGHEFLRHIERTKVM 250 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKN 294 +H+V A + A + I EL AYN +L KK +++ ++ID + +++ ++ + Sbjct: 251 IHMVDAAGTEGRDPVADIKAINKELEAYNPQLLKKPQVIAANKIDAIAGDENEVISALRA 310 Query: 295 ELATQCGQVPFEFSSITGHGIPQIL 319 E Q +V F S+++G G+ ++L Sbjct: 311 EFEPQGIKV-FPISAVSGKGLKELL 334 >gi|320157511|ref|YP_004189890.1| GTP-binding protein Obg [Vibrio vulnificus MO6-24/O] gi|319932823|gb|ADV87687.1| GTP-binding protein Obg [Vibrio vulnificus MO6-24/O] Length = 389 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 146/331 (44%), Positives = 215/331 (64%), Gaps = 8/331 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +++GDGG G +SF REKF+ GGPDGG GG GGDV+IQA NLNTLID+R Sbjct: 1 MKFVDEAVIKVQAGDGGNGVVSFWREKFVTKGGPDGGDGGDGGDVYIQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ G+ G N +G +G+D+ L VPVGT+ + ++ ++ + G+++++A G Sbjct: 61 FQRFYEAERGQNGSGGNCTGKRGKDITLRVPVGTRAVDIHTNEIVAEVAEHGKKVMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTMGTKGEIRELRLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + VQ A I+DEL Y+ +L K + +++D V + E Sbjct: 241 LLHMIDIFPIDQSDPVQNAL-TIIDELEQYSEKLANKPRWLVFNKVDLVSEEQADEIIQE 299 Query: 296 LATQCG--QVPFEFSSITGHGIPQILECLHD 324 + G + F+ S++ G ++ L D Sbjct: 300 VIDALGWEEQYFKISAVNRQGTKELCYKLAD 330 >gi|37678656|ref|NP_933265.1| GTPase ObgE [Vibrio vulnificus YJ016] gi|81859966|sp|Q7MP92|OBG_VIBVY RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|37197396|dbj|BAC93236.1| GTP1/Obg family protein [Vibrio vulnificus YJ016] Length = 388 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 146/331 (44%), Positives = 215/331 (64%), Gaps = 8/331 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +++GDGG G +SF REKF+ GGPDGG GG GGDV+IQA NLNTLID+R Sbjct: 1 MKFVDEAVIKVQAGDGGNGVVSFWREKFVTKGGPDGGDGGDGGDVYIQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ G+ G N +G +G+D+ L VPVGT+ + ++ ++ + G+++++A G Sbjct: 61 FQRFYEAERGQNGSGGNCTGKRGKDITLRVPVGTRAVDIHTNEIVAEVAEHGKKVMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTMGTKGEIRELRLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + VQ A I+DEL Y+ +L K + +++D V + E Sbjct: 241 LLHMIDIFPIDQSDPVQNAL-TIIDELEQYSEKLANKPRWLVFNKVDLVSEEQADEIIQE 299 Query: 296 LATQCG--QVPFEFSSITGHGIPQILECLHD 324 + G + F+ S++ G ++ L D Sbjct: 300 VIDALGWEEQYFKISAVNRQGTKELCYKLAD 330 >gi|260773623|ref|ZP_05882539.1| GTP-binding protein Obg [Vibrio metschnikovii CIP 69.14] gi|260612762|gb|EEX37965.1| GTP-binding protein Obg [Vibrio metschnikovii CIP 69.14] Length = 389 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 141/288 (48%), Positives = 200/288 (69%), Gaps = 4/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +++GDGG G +SF REKFI GGPDGG GG GGDV+I A NLNTLID+R Sbjct: 1 MKFVDEAVIKVQAGDGGNGVVSFWREKFITKGGPDGGDGGDGGDVYILADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ + A+ GE G N +G +G+D VL VPVGT+ + +I ++ + G+++++A G Sbjct: 61 FQRFYDAERGENGRGANCTGKRGKDKVLRVPVGTRAVDIHTNEVIAEVAEHGKKVMIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSS N+AP + G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNARFKSSVNRAPRQKSMGTKGEVREVRLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH++ + + Q ILDEL Y+ +L +K + ++ D + Sbjct: 241 LLHMIDIMPADQSDPVQNALTILDELEQYSEKLAQKPRWLVFNKTDLM 288 >gi|269218641|ref|ZP_06162495.1| Spo0B-associated GTP-binding protein [Actinomyces sp. oral taxon 848 str. F0332] gi|269211752|gb|EEZ78092.1| Spo0B-associated GTP-binding protein [Actinomyces sp. oral taxon 848 str. F0332] Length = 501 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 133/329 (40%), Positives = 194/329 (58%), Gaps = 16/329 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++++GDGG G +S RREKF GGPDG +GGRGGDV I+A TL+ + + Sbjct: 4 FVDHVTLHVKAGDGGNGCVSVRREKFKPLGGPDGANGGRGGDVVIEADPQETTLLTYHHA 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA G G RSG GED VL VPVGT V DG ++ DL + GQR + A GG Sbjct: 64 PHQKAPSGTPGAGDMRSGRNGEDRVLNVPVGTVVKGPDG-EVLADLVEPGQRFVAARGGQ 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S +AP +A G G+E + L+LK +AD+ ++G P+AGKS+ +A+++ A Sbjct: 123 GGLGNAALASPKRKAPGFALLGDAGEEGEVVLELKSVADVALVGFPSAGKSSLIAAMSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G + + +AD+PG+I A G G+G FL+H ER V++H Sbjct: 183 RPKIADYPFTTLVPNLGVVQAGDERYTIADVPGLIPGASDGKGLGLEFLRHIERCSVIVH 242 Query: 243 IVSALE----ENVQAAYQCILDELSAY---------NSELRKKIEIVGLSQIDTVDSDTL 289 ++ + + I EL+AY + L + +V L++ D ++ L Sbjct: 243 VLDCATFEPGRDPLSDLATIESELAAYARRLPQEEGRAPLADRPRVVVLNKADVPEAKEL 302 Query: 290 ARKKNELATQCGQVPFEFSSITGHGIPQI 318 A + L G F S++T G+ ++ Sbjct: 303 A--EFVLPELSGYPVFIVSAVTHTGLREL 329 >gi|257468989|ref|ZP_05633083.1| GTPase ObgE [Fusobacterium ulcerans ATCC 49185] gi|317063237|ref|ZP_07927722.1| SPO0B-associated GTP-binding protein [Fusobacterium ulcerans ATCC 49185] gi|313688913|gb|EFS25748.1| SPO0B-associated GTP-binding protein [Fusobacterium ulcerans ATCC 49185] Length = 428 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 142/322 (44%), Positives = 209/322 (64%), Gaps = 6/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE V +++G+GG G +FRREK+I+FGGPDGG GG GG+V A N+NTLIDF+++ Sbjct: 2 FIDEVIVTVKAGNGGDGSAAFRREKYIQFGGPDGGDGGNGGNVIFIADPNINTLIDFKFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++GE G K+ G GED+V+ VPVGTQV + + L+ D++ EG+ IL GG Sbjct: 62 KVFKAENGENGQKKQMYGKTGEDLVIKVPVGTQVRDIETGKLLLDMNVEGEPRILLKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSST + P A G G E + L+LKL+AD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGAGNVHFKSSTRKTPRIAGKGREGAEIKVKLELKLLADVALVGYPSVGKSSFINRVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K+ Y FTTL P LG+V+ E K F++ADIPG+I+ AH+G G+GD+FL+H ER ++ Sbjct: 182 NSKVGSYHFTTLEPKLGVVRLEEGKSFVIADIPGLIEGAHEGVGLGDKFLRHIERCKMIY 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H+V E + A Y+ I EL ++ +L K +I+ +++D + D + + K + Sbjct: 242 HLVDVAEIEGRDAIEDYEKINFELKKFSEKLSTKKQIILANKMDLLWDMEKYEKFKAHVE 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 Q +V F S I GI ++L Sbjct: 302 AQGHEV-FPVSVILNEGIKEVL 322 >gi|59710887|ref|YP_203663.1| GTPase ObgE [Vibrio fischeri ES114] gi|81311030|sp|Q5E871|OBG_VIBF1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|59478988|gb|AAW84775.1| GTPase involved in cell partioning and DNA repair [Vibrio fischeri ES114] Length = 390 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 147/331 (44%), Positives = 214/331 (64%), Gaps = 8/331 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SF REKF+ GGPDGG GG GGDV+++A NLNTLID+R Sbjct: 1 MKFVDEATIKVDAGDGGNGVVSFWREKFVAKGGPDGGDGGDGGDVYLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + + A+ G+ G N +G +GED+ L VPVGT+ + D + +L G + ++A G Sbjct: 61 FNRFYNAERGKNGSGGNCTGKRGEDITLKVPVGTRAIDIDTGEKVAELMTHGMKQMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTLGTKGEVRELRLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ G K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVRARGNKSFVVADIPGLIEGAADGAGLGVRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ L + VQ A I+DEL Y+ ++ K + ++ D + + K NE Sbjct: 241 LLHVIDILPIDGSDPVQNAL-TIIDELEQYSEKVASKPRWLLFNKTDLLLEEEADEKINE 299 Query: 296 L--ATQCGQVPFEFSSITGHGIPQILECLHD 324 + A F+ ++++ G ++ + L D Sbjct: 300 ILEALAWEDRYFKIAAVSRTGTQELCDELAD 330 >gi|256850988|ref|ZP_05556377.1| obg family GTPase CgtA [Lactobacillus jensenii 27-2-CHN] gi|260661200|ref|ZP_05862114.1| obg family GTPase CgtA [Lactobacillus jensenii 115-3-CHN] gi|282932059|ref|ZP_06337517.1| Obg family GTPase CgtA [Lactobacillus jensenii 208-1] gi|256616050|gb|EEU21238.1| obg family GTPase CgtA [Lactobacillus jensenii 27-2-CHN] gi|260548137|gb|EEX24113.1| obg family GTPase CgtA [Lactobacillus jensenii 115-3-CHN] gi|281303826|gb|EFA95970.1| Obg family GTPase CgtA [Lactobacillus jensenii 208-1] Length = 432 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 146/333 (43%), Positives = 213/333 (63%), Gaps = 6/333 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EK++ GGP GG GGRGG + A S L TL+DFRY+ Sbjct: 4 FVDQTKIEVQAGKGGDGMVAFRHEKYVPNGGPAGGDGGRGGSIIFVADSGLRTLMDFRYR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA +GE G +++ G +D+ L VPVGT V + +I D+ ++GQ +++A GG Sbjct: 64 RKFKADNGENGRIKSQYGRGAKDLYLKVPVGTVVSDFFTGEIIGDMTKKGQELVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +S N AP A G G+ + + L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 124 GGRGNIHFATSVNTAPEIAENGEPGEFRTLKLELKVLADVGLVGFPSVGKSTLLSVVTKA 183 Query: 183 KPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG +V ++F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIAAYEFTTLTPNLGMVVLNDGRDFSMADLPGLIEGASQGVGLGIQFLRHVERTKVIL 243 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKKNELA 297 H+VS N + A Y+ I ELS Y ++L KK EI+ SQ+D SD A K L Sbjct: 244 HLVSMDPNNGRDAVEDYKIIRKELSNYTADLTKKREIIVASQMDIPGSDEKFADFKQGLE 303 Query: 298 TQCGQVP-FEFSSITGHGIPQILECLHDKIFSI 329 + P F+ SS+T G+ ++ D + + Sbjct: 304 ELGIEEPIFKISSVTHQGLEPLMNKAADLVAEV 336 >gi|238918411|ref|YP_002931925.1| GTPase ObgE [Edwardsiella ictaluri 93-146] gi|238867979|gb|ACR67690.1| GTP-binding protein Obg/CgtA , putative [Edwardsiella ictaluri 93-146] Length = 392 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 136/305 (44%), Positives = 206/305 (67%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA ++I +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEAVIHIEAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT++ + D ++ D+ + Q++++ G Sbjct: 61 FEKSFRAERGQNGQSRDCTGKRGQDVTIKVPVGTRITDVDTGEVLGDMTRHQQKLMVGKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+ P G G ++ + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRDLSLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+I+ A +GAG+G RFL+H ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEKSFVVADIPGLIEGASEGAGLGIRFLRHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ E + + I+ EL Y+ +L +K + ++ D + + + + Sbjct: 241 LLHLIDLAPIDESDPVENARVIIGELEKYSEKLFQKPRWLVFNKADLLAPEEAKARAQAI 300 Query: 297 ATQCG 301 A G Sbjct: 301 ADALG 305 >gi|257784486|ref|YP_003179703.1| GTP-binding protein Obg/CgtA [Atopobium parvulum DSM 20469] gi|257472993|gb|ACV51112.1| GTP-binding protein Obg/CgtA [Atopobium parvulum DSM 20469] Length = 482 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 137/341 (40%), Positives = 213/341 (62%), Gaps = 12/341 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + ++ GDGGAG +SFRRE ++ GGPDGG GG GG+V I A + L++LID+RY+ Sbjct: 4 FTDLCHINVKGGDGGAGCMSFRREAYVPKGGPDGGDGGHGGNVVIVADAQLSSLIDYRYK 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE-----EDGISLICDLDQEGQRIIL 117 HFKA+ G G R G+ G+D++L VP+GT V E ++ + I DL G+++++ Sbjct: 64 HHFKAERGTHGKGARRHGSDGQDLLLRVPLGTVVRELDPETQEPLYEIADLTSPGEQVVV 123 Query: 118 APGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 APGGNGG GN HF +S +AP +A G QE I L++KL+AD+ ++G+P+ GKS+ +A Sbjct: 124 APGGNGGRGNIHFVTSVRRAPAFAEKGEPAQEHWIELEMKLMADVALVGMPSVGKSSLIA 183 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTER 236 ++ A+PKIADYPFTTL PNLG+V+ + + F+ AD+PG+I+ A +G G+G +FL+H ER Sbjct: 184 RISAARPKIADYPFTTLVPNLGVVRAQNGQSFVCADVPGLIEGASEGKGLGHQFLRHIER 243 Query: 237 THVLLHIVSAL-----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 T +++H+V + V+ Y I EL AY S+L + +IV ++ D ++ Sbjct: 244 TALIVHMVDVTGGYEGRDPVE-DYYAINKELKAYASKLADRPQIVVANKCDMPGTEDAIE 302 Query: 292 KKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + A + F S++TG + + ++ +R E Sbjct: 303 ALRKAAEADNRTFFAISTVTGLNLDDFVTTCAAEVAELRKE 343 >gi|89098984|ref|ZP_01171864.1| predicted GTPase [Bacillus sp. NRRL B-14911] gi|89086388|gb|EAR65509.1| predicted GTPase [Bacillus sp. NRRL B-14911] Length = 430 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 137/328 (41%), Positives = 209/328 (63%), Gaps = 5/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G ++FRREK++ GGP GG GG+G DV + L TL+DFRY Sbjct: 2 FVDQTKIYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGKGADVVFEVEEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM +N+ G +D+++ VP GT V + D +I DL + GQR I+A GG Sbjct: 62 RHFKASRGEHGMSKNQHGRNSKDMIIKVPPGTVVTDADTKEVIADLTEHGQRAIIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LKL+AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNTRFATPANPAPELSEHGEPGQEREVVLELKLLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ E + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIAPNLGMVETEDGRSFVMADLPGLIEGAHSGVGLGHQFLRHIERTRVIV 241 Query: 242 HIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ + Y+ I EL YN L ++ +I+ +++D +++ ++ T Sbjct: 242 HVIDMAAVEGRGPYEDYLTINKELKEYNLRLTERPQIIVANKMDMPEAEENLKEFKSRLT 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKI 326 + F S+ T G+ +L + DKI Sbjct: 302 DDHPI-FPISAFTRQGLRDLLFAVADKI 328 >gi|170288646|ref|YP_001738884.1| GTP-binding protein Obg/CgtA [Thermotoga sp. RQ2] gi|261277726|sp|B1LA53|OBG_THESQ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|170176149|gb|ACB09201.1| GTP-binding protein Obg/CgtA [Thermotoga sp. RQ2] Length = 435 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 136/333 (40%), Positives = 216/333 (64%), Gaps = 3/333 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+++++GDGG G +SFRREK++ GGPDGG GG GG V+++A +++TLI+F + Sbjct: 8 FVDRVKIFVKAGDGGNGCVSFRREKYVPKGGPDGGDGGDGGFVFLRANPSVSTLIEFVNK 67 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A++G+ GM + G G+D+ + VPVGT V + +I DL++ G+ + +A GG Sbjct: 68 RKFVAENGKHGMGKKMKGRNGKDLFIDVPVGTVVKDAVTGEIIADLNEPGKIVCVARGGK 127 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHF +ST QAP A G G+ + + L+LK++AD+G++G PN GKS+ ++ ++ A Sbjct: 128 GGRGNAHFATSTKQAPLIAERGEKGESRWLELELKILADVGLVGYPNVGKSSLISRISNA 187 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIA+YPFTTL PNLG+VK F++ADIPG+I+ A +G G+G+ FL+H ER +++ H Sbjct: 188 RPKIANYPFTTLIPNLGVVKYDDFSFVVADIPGLIEGASEGVGLGNVFLRHVERCYLIAH 247 Query: 243 I--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 + VS E E+ Y I +E+ Y+ L +K EIV ++ID + + L + L Sbjct: 248 VIDVSGYEREDPVRDYFVIREEMKKYSPFLLEKPEIVVANKIDLIGKEELEKILKRLRDA 307 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + S++TG GI ++ L + ++ E Sbjct: 308 TNREVIPVSALTGEGIDLLVSKLASIVREMKVE 340 >gi|295086992|emb|CBK68515.1| Obg family GTPase CgtA [Bacteroides xylanisolvens XB1A] Length = 362 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 135/306 (44%), Positives = 198/306 (64%), Gaps = 5/306 (1%) Query: 23 FRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAK 82 RREK+ GGPDGG GGRGG + ++ N TL+ +Y +H A HGE G K G Sbjct: 1 MRREKYCPNGGPDGGDGGRGGHIILRGNRNYWTLLHLKYDRHAMAGHGESGSKGRSFGKD 60 Query: 83 GEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYAN 142 G D ++ VP GT V+ + +CD+ ++GQ ++L GG GG GN HFK++T QAP +A Sbjct: 61 GADKIIEVPCGTVVYNAETGEYLCDVTEDGQEVVLLKGGRGGQGNWHFKTATRQAPRFAQ 120 Query: 143 PGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK 202 PG QE + ++LKL+AD+G++G PNAGKST L+S++ AKPKIADYPFTTL PNLGIV Sbjct: 121 PGEPMQEMTVIMELKLLADVGLVGFPNAGKSTLLSSISAAKPKIADYPFTTLEPNLGIVS 180 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDE 261 G K F++ADIPGII+ A QG G+G RFL+H ER +LL +V A ++++ Y+ +L+E Sbjct: 181 YHGGKSFVMADIPGIIEGASQGKGLGLRFLRHIERNSLLLFMVPADSDDIRKEYEVLLNE 240 Query: 262 LSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILE 320 L +N E+ K ++ +++ D +D + + + L +P F SS++G GI + + Sbjct: 241 LRTFNPEMLDKQRVLAVTKSDMLDQELMDEIEPTLPE---GIPHVFISSVSGLGISVLKD 297 Query: 321 CLHDKI 326 L +++ Sbjct: 298 ILWEEL 303 >gi|148269961|ref|YP_001244421.1| GTPase ObgE [Thermotoga petrophila RKU-1] gi|281412158|ref|YP_003346237.1| GTP-binding protein Obg/CgtA [Thermotoga naphthophila RKU-10] gi|261277722|sp|A5IKX2|OBG_THEP1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|147735505|gb|ABQ46845.1| GTP-binding protein Obg/CgtA [Thermotoga petrophila RKU-1] gi|281373261|gb|ADA66823.1| GTP-binding protein Obg/CgtA [Thermotoga naphthophila RKU-10] Length = 435 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 136/333 (40%), Positives = 216/333 (64%), Gaps = 3/333 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+++++GDGG G +SFRREK++ GGPDGG GG GG V+++A +++TLI+F + Sbjct: 8 FVDRVKIFVKAGDGGNGCVSFRREKYVPKGGPDGGDGGDGGFVFLRANPSVSTLIEFVNK 67 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A++G+ GM + G G+D+ + VPVGT V + +I DL++ G+ + +A GG Sbjct: 68 RKFVAENGKHGMGKKMKGRNGKDLFIDVPVGTVVKDAVTGEIIADLNEPGKIVCVARGGK 127 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHF +ST QAP A G G+ + + L+LK++AD+G++G PN GKS+ ++ ++ A Sbjct: 128 GGRGNAHFATSTKQAPLIAERGEKGESRWLELELKILADVGLVGYPNVGKSSLISRISNA 187 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIA+YPFTTL PNLG+VK F++ADIPG+I+ A +G G+G+ FL+H ER +++ H Sbjct: 188 RPKIANYPFTTLIPNLGVVKYDDFSFVVADIPGLIEGASEGVGLGNVFLRHVERCYLIAH 247 Query: 243 I--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 + VS E E+ Y I +E+ Y+ L +K EIV ++ID + + L + L Sbjct: 248 VIDVSGYEREDPVRDYFVIREEMKKYSPFLLEKPEIVVANKIDLIGKEELEKILKRLRDA 307 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + S++TG GI ++ L + ++ E Sbjct: 308 TDREVIPVSAVTGEGIDLLVSKLASIVREMKVE 340 >gi|310643568|ref|YP_003948326.1| gtpase obg [Paenibacillus polymyxa SC2] gi|309248518|gb|ADO58085.1| GTPase obg [Paenibacillus polymyxa SC2] Length = 436 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 137/323 (42%), Positives = 214/323 (66%), Gaps = 6/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK++++ GDGG G I+FRREK++ GGP GG GG GGDV + L TL+DFRYQ Sbjct: 2 FVDKAKIFVKGGDGGDGLIAFRREKYVPNGGPAGGDGGNGGDVIFRVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ G KG +++ GA E +++ +P GT + ++D ++ D+ + GQ++++A GG Sbjct: 62 RHFKAQRGVKGRNKSQHGANAEHMIVRIPPGTVIMDDDTGEVLADMTRHGQQVVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + +N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPSNPAPELAENGAEGQERYITLELKVMADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V G + F++AD+PG+I+ AH+G G+G FL+H ERT +++ Sbjct: 182 KPKIGAYHFTTITPNLGVVDVGDQRNFVMADLPGLIEGAHEGTGLGHEFLRHIERTRIII 241 Query: 242 HIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H+V + ++ I DEL YN+ L ++ +IV +++D ++ + LA K ++A Sbjct: 242 HVVDMAGSEGRDPFEDWTKINDELKQYNAALAERPQIVAANKMDMPEAEENLAHFKEQIA 301 Query: 298 TQCGQVP-FEFSSITGHGIPQIL 319 T + SS+T G+ ++L Sbjct: 302 TIRPDLEIMPISSLTRQGVKELL 324 >gi|326201576|ref|ZP_08191447.1| GTP-binding protein Obg/CgtA [Clostridium papyrosolvens DSM 2782] gi|325988176|gb|EGD49001.1| GTP-binding protein Obg/CgtA [Clostridium papyrosolvens DSM 2782] Length = 425 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 147/331 (44%), Positives = 214/331 (64%), Gaps = 4/331 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+Y+++G+GG G +SF REK+I GGPDGG GG+GGDV LNTLIDFRY+ Sbjct: 2 FTDSAKIYVKAGNGGNGMVSFHREKYIAAGGPDGGDGGKGGDVIFVVDEGLNTLIDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++FKA+ G+ G N SG GED+++ VP+GT V +E ++ DL + GQ ++A GG Sbjct: 62 KNFKAEAGQDGGPSNCSGKNGEDLIIKVPLGTMVKDETTDMVLVDLIKPGQTCVIAKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + T Q P +A G LG E + L++K+IAD+G++G PN GKST L+ V+ A Sbjct: 122 GGKGNQHFATPTRQVPNFAKSGDLGDEYSLILEMKMIADVGLLGYPNVGKSTILSMVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V+ E K F++ADIPG+I+ AH+G G+G FL+H ERT +L+ Sbjct: 182 KPKIANYHFTTLVPNLGVVQIEQGKSFVIADIPGLIEGAHEGVGLGHEFLRHVERTKLLV 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+ VS +E + + I EL YN L + +IV +++D ++ + E Sbjct: 242 HVVDVSGVEGRDAVEDFDTINAELQKYNEVLSTRPQIVVANKMDIPGAEENYKVFKETLE 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 + G F S+ T G+ +++ + D + S+ Sbjct: 302 KRGYKVFGVSAATNKGLKELMYAVADTLKSL 332 >gi|255019370|ref|ZP_05291481.1| GTP-binding protein Obg [Acidithiobacillus caldus ATCC 51756] gi|254971190|gb|EET28641.1| GTP-binding protein Obg [Acidithiobacillus caldus ATCC 51756] Length = 373 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 145/327 (44%), Positives = 218/327 (66%), Gaps = 7/327 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE ++++ +G GG G +SFRREKFI FGGPDGG GGRGGDV++ A NLNTLIDFR Sbjct: 1 MKFIDEVRIFVAAGKGGHGAVSFRREKFIPFGGPDGGDGGRGGDVYLIARENLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ+ ++A++G G R +G G+D+ + VPVGT VF+ED L+ DL GQR+++ G Sbjct: 61 YQRRYRAENGHGGAGRQMTGRAGKDLEIAVPVGTLVFDEDTRELLGDLHSPGQRLLVCRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN +KSS N+AP G +E+ + L+L+L+AD+G++G PNAGKST + +V+ Sbjct: 121 GRGGHGNLWYKSSVNRAPRQHELGGAAEERQLRLELRLLADVGLLGFPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL P+LG+V+ + F++ADIPG+I A +GAG+G RFLKH RT + Sbjct: 181 AARPKVADYPFTTLRPHLGVVRLALEASFVIADIPGLIPGAAEGAGLGTRFLKHLSRTRL 240 Query: 240 LLHIVSALEENVQA----AYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKN 294 LLH++ + + + +EL Y+ L ++ + +++ D ++ + A+ ++ Sbjct: 241 LLHVLDMAPPDPDTDPVMQFHELEEELRRYSPALAQRPRWLVVNKADLMEPAAAEAQFRS 300 Query: 295 ELATQCGQVP-FEFSSITGHGIPQILE 320 L Q P F S+ TG G ++++ Sbjct: 301 ILRRLDWQGPAFLISAATGFGCAELVQ 327 >gi|119472623|ref|ZP_01614614.1| GTPase involved in cell partioning and DNA repair [Alteromonadales bacterium TW-7] gi|119444827|gb|EAW26128.1| GTPase involved in cell partioning and DNA repair [Alteromonadales bacterium TW-7] Length = 383 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 147/307 (47%), Positives = 211/307 (68%), Gaps = 6/307 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE ++ +GDGG+G +SFRREK++ GGPDGG GG GG V++QA NLNTLID++ Sbjct: 1 MKFVDEVEIRAEAGDGGSGIVSFRREKYVPDGGPDGGDGGDGGSVYLQADENLNTLIDYQ 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ +A+ G G RN +G K +D+ + VPVGT++ + D + DL Q GQRI++A G Sbjct: 61 FERFHRAERGTNGRSRNCTGKKADDLFVMVPVGTRITDVDTQEGLGDLTQHGQRILVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSSTN+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GFHGLGNARFKSSTNRAPRQKTLGTPGEVRNLKLELLLLADVGLLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V+ E K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AARPKVADYPFTTLIPNLGVVRPEANKSFVIADIPGLIEGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSALEEN----VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHI+ + + V A+ I++EL Y+ +L +K + ++ID + D + Sbjct: 241 LLHIIDVMPVDGSNPVDNAF-AIINELHQYSPKLAEKPRWLVFNKIDLLPEDEAQALCDA 299 Query: 296 LATQCGQ 302 +A + G+ Sbjct: 300 IAQELGE 306 >gi|291524793|emb|CBK90380.1| Obg family GTPase CgtA [Eubacterium rectale DSM 17629] Length = 427 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 142/325 (43%), Positives = 212/325 (65%), Gaps = 10/325 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+ I+SG GG G +SFRREK++ GGPDGG GG+GGDV +NTL D+R++ Sbjct: 2 FADRAKIIIKSGKGGDGHVSFRREKYVPNGGPDGGDGGKGGDVIFLVDKGINTLTDYRHR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A+ G++G K+N G GED++L VP GT + + +I D+ + R ++ GG Sbjct: 62 RKFAAEPGQEGGKKNCHGKNGEDLILKVPEGTLIKDAASGKVIADMSGDNTRQVILRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+ +ST QAP YA PG E + L+LK+IAD+G++G PN GKST L+ VT A Sbjct: 122 GGQGNQHYATSTMQAPKYAQPGQDAIEIEVQLELKVIADVGLVGFPNVGKSTLLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PKIA+Y FTTL PNLG+V EG+ F++ADIPG+I+ A +G G+G FL+H ERT V+ Sbjct: 182 QPKIANYHFTTLQPNLGVVDMDEGFG-FVIADIPGLIEGASEGIGLGHEFLRHIERTKVM 240 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKN 294 +H+V A + A + + EL AYN +L KK +++ ++ID + +++ ++ + Sbjct: 241 IHMVDAAGTEGRDPVADIKAVNKELEAYNPQLLKKPQVIAANKIDAIAGDENEVISALRA 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQIL 319 E Q +V F S+++G G+ ++L Sbjct: 301 EFEPQGIKV-FPISAVSGKGLKELL 324 >gi|313633136|gb|EFS00028.1| Obg family GTPase CgtA [Listeria seeligeri FSL N1-067] gi|313637708|gb|EFS03081.1| Obg family GTPase CgtA [Listeria seeligeri FSL S4-171] Length = 429 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 138/330 (41%), Positives = 212/330 (64%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y+++G+GG G ++FRREKF+ GGP GG GG+G DV L TL+DFR++ Sbjct: 2 FVDQVKIYVKAGNGGDGMVAFRREKFVPNGGPAGGDGGKGADVVFVVDEGLRTLVDFRFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+HGE GM ++ G +D+V+ VP GT V + D +I DL GQR ++A G Sbjct: 62 RIFKAEHGEHGMSKSMHGRGAQDLVVKVPQGTIVKDIDTGEIIADLVAHGQRAVIAKAGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNKRFATPANPAPELSENGEPGQERNVQLELKVLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA Y FTT+ PNLG+V G + F++AD+PG+I+ A QG G+G +FL+H ERT V++ Sbjct: 182 RPKIAAYHFTTIVPNLGMVDAGDGRSFVMADLPGLIEGASQGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALEENVQ-AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ S E V Y I +EL YN L ++ +I+ +++D D++ E T Sbjct: 242 HVIDMSGSEGRVPFDDYVAINNELEQYNLRLMERPQIIVANKMDMPDAE---ENLKEFKT 298 Query: 299 QCGQ-VP-FEFSSITGHGIPQILECLHDKI 326 + + +P F S++T G+ ++L + DK+ Sbjct: 299 KINEDIPVFPISAVTKTGLRELLLAIADKL 328 >gi|87301318|ref|ZP_01084159.1| GTP1/Obg family GTP-binding protein [Synechococcus sp. WH 5701] gi|87284286|gb|EAQ76239.1| GTP1/Obg family GTP-binding protein [Synechococcus sp. WH 5701] Length = 330 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 143/320 (44%), Positives = 210/320 (65%), Gaps = 1/320 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ ++ G GG G ++FRREK++ GGP GG GG GG VW++A NL TL+DF+ Sbjct: 1 MQFIDQARIAVQGGRGGDGIVAFRREKYVPAGGPSGGDGGHGGTVWLEADPNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F+A G +G RSGA G+D+V+ VP GT+V ++ L+ DL + G R+ +A G Sbjct: 61 YKRLFEAPEGRRGGPNRRSGASGDDLVIRVPCGTEVRLQESEELLGDLTEPGDRLRVAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S+ N+AP G G+E+ + L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GRGGLGNAHYLSNRNRAPEKCTEGRDGEERQLQLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG+V+ + + ADIPG+I A QGAG+G FL+H ERT + Sbjct: 181 AAKPKIADYPFTTLVPNLGVVRRPSGDGTVFADIPGLIAGAAQGAGLGHDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V A +V + + EL AY L ++ I+ L++ + + D L + LA Sbjct: 241 LVHLVDASSADVTSDLAVVEQELLAYGHGLDQRPRILALNKSELLLPDQLEAARASLAAL 300 Query: 300 CGQVPFEFSSITGHGIPQIL 319 G S+ T G+ +L Sbjct: 301 WGGEVLLISAATKSGLDGLL 320 >gi|159900740|ref|YP_001546987.1| GTP-binding protein Obg/CgtA [Herpetosiphon aurantiacus ATCC 23779] gi|261266833|sp|A9AXD9|OBG_HERA2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|159893779|gb|ABX06859.1| GTP-binding protein Obg/CgtA [Herpetosiphon aurantiacus ATCC 23779] Length = 437 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 141/337 (41%), Positives = 210/337 (62%), Gaps = 11/337 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A + +++GDGG G +FRREK++ GGPDGG GGRGG V+++ + +LNTL+ FR++ Sbjct: 4 FIDRALITVKAGDGGDGMATFRREKYVPRGGPDGGDGGRGGSVYLEVSPHLNTLLPFRFE 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEE-DGISLICDLDQEGQRIILAPGG 121 HF+A G ++ + G GED + VP GT V E +G DL GQ++++A GG Sbjct: 64 THFEADKGLNAGRQRKRGRTGEDTFIRVPPGTIVSAEIEGEVQTVDLLFPGQKLLVARGG 123 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN HF +++NQ P A G G+E+ + L+LK+IAD+G++G PNAGKST L+ V+ Sbjct: 124 KGGLGNTHFATASNQVPRIAELGQPGEERELQLELKVIADVGLVGFPNAGKSTLLSMVSA 183 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A+PKIA+YPFTTL PNLG+ + F++ADIPG+I+ A +G G+G FL+H ERT +L+ Sbjct: 184 ARPKIANYPFTTLSPNLGVAEFNDFTFVVADIPGLIEGASRGVGLGHDFLRHIERTRILV 243 Query: 242 HIVSALEENVQAAYQCILD---ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ A + ++ L EL AY+SEL ++ ++V L++ D D++ Sbjct: 244 HVLDAAGTEGRDPFEDFLTINAELKAYSSELAQRPQLVALNKTDIPDAEAFDELMRPQII 303 Query: 299 QCGQVP---FEFSSITGHGIPQILECLHDKIFSIRGE 332 G P F S+ T G L+ L +I I E Sbjct: 304 AWGIDPENIFPISAATNQG----LQPLQRRIVDILRE 336 >gi|317132605|ref|YP_004091919.1| GTP-binding protein Obg/CgtA [Ethanoligenens harbinense YUAN-3] gi|315470584|gb|ADU27188.1| GTP-binding protein Obg/CgtA [Ethanoligenens harbinense YUAN-3] Length = 422 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 135/331 (40%), Positives = 214/331 (64%), Gaps = 7/331 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+ +++G+GG G +SFRREK++ GGPDGG GG+GGD+ + NL+TL DFRY+ Sbjct: 2 FVDTAKILLKAGNGGNGCVSFRREKYVAAGGPDGGDGGKGGDILFEVDDNLSTLSDFRYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A++GE G + G +G+ +V+ VP GT + +E L+ D+ + + + GG Sbjct: 62 RKYAAENGESGKPKKSFGRRGKPLVIKVPRGTLIKDEATGKLLHDMSDD-KPYVAVQGGK 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN HF + T Q P +A G+ G+E+ + L+LKL+AD+G++G PN GKST L++V+ A Sbjct: 121 GGWGNCHFATPTRQVPRFAKSGVPGEEREVRLELKLLADVGLLGFPNVGKSTLLSTVSEA 180 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KP I +YPFTTL P LG+V+ G F++ADIPG+I+ A G G+G FL+H ER +L+H Sbjct: 181 KPVIGNYPFTTLSPVLGVVRMGESSFVMADIPGLIEGASAGVGLGHDFLRHVERCRLLVH 240 Query: 243 IV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 +V S + VQ ++ I EL+ Y+ EL ++ +IV ++ D D + +A + + Sbjct: 241 VVDVSGSEGRDPVQ-DFETINAELAGYSPELAERPQIVAANKCDIADEEAVAHFRRYI-E 298 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 Q G V F S+ T G+ +L+ + K+ ++ Sbjct: 299 QKGLVFFPISAATKDGVAPLLQAVAAKLAAL 329 >gi|297565200|ref|YP_003684172.1| GTP-binding protein Obg/CgtA [Meiothermus silvanus DSM 9946] gi|296849649|gb|ADH62664.1| GTP-binding protein Obg/CgtA [Meiothermus silvanus DSM 9946] Length = 415 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 136/320 (42%), Positives = 211/320 (65%), Gaps = 3/320 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D ++ + +G GG G ISF REK+I GGPDGG GG+GG V ++A +++L + + Sbjct: 2 FRDVLEITVTAGRGGDGAISFWREKYIAKGGPDGGDGGQGGSVILRALGQVDSLSNL-SK 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA+ G+ G + G G D+V+ VP GT+VF+ + +L+ DL +EGQ ++ A GG Sbjct: 61 RTYKAEDGQHGSGKGMFGKAGRDLVIEVPRGTRVFDAETGALLADLTEEGQTLVAAEGGR 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GNA F + T QAP +A G G++K + L+L L+AD+G++G PNAGKS+ LA++T A Sbjct: 121 GGWGNARFVTPTRQAPRFAEAGEPGEKKRLRLELMLLADVGLVGYPNAGKSSLLAALTHA 180 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIA+YPFTTL PNLG+V+ + F LADIPGII+ A +G G+G FL+H RT VLL+ Sbjct: 181 QPKIANYPFTTLSPNLGVVERALERFTLADIPGIIEGASEGKGLGLEFLRHIARTRVLLY 240 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQ 302 ++ A E V + +Q + EL +Y+ +L + ++ L++ID ++ + + R + EL +Q G Sbjct: 241 VLDAGERPV-SNFQTLRAELRSYDPDLLSRPALIALNKIDLLEEEEVTRLEAEL-SQTGL 298 Query: 303 VPFEFSSITGHGIPQILECL 322 S + G+ ++E L Sbjct: 299 PVLAVSVLERKGLESLVEAL 318 >gi|289434817|ref|YP_003464689.1| GTP-binding protein, GTP1/OBG family [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171061|emb|CBH27603.1| GTP-binding protein, GTP1/OBG family [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 429 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 138/330 (41%), Positives = 212/330 (64%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y+++G+GG G ++FRREKF+ GGP GG GG+G DV L TL+DFR++ Sbjct: 2 FVDQVKIYVKAGNGGDGMVAFRREKFVPNGGPAGGDGGKGADVVFVVDEGLRTLVDFRFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+HGE GM ++ G +D+V+ VP GT V + D +I DL GQR ++A G Sbjct: 62 RIFKAEHGEHGMSKSMHGRGAQDLVVKVPQGTIVKDIDTGEIIADLVAHGQRAVIAKAGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNKRFATPANPAPELSENGEPGQERNVQLELKVLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA Y FTT+ PNLG+V G + F++AD+PG+I+ A QG G+G +FL+H ERT V++ Sbjct: 182 RPKIAAYHFTTIVPNLGMVDAGDGRSFVMADLPGLIEGASQGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALEENVQ-AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ S E V Y I +EL YN L ++ +I+ +++D D++ E T Sbjct: 242 HVIDMSGSEGRVPFDDYVAINNELEQYNLRLMERPQIIVANKMDMPDAE---ENLKEFRT 298 Query: 299 QCGQ-VP-FEFSSITGHGIPQILECLHDKI 326 + + +P F S++T G+ ++L + DK+ Sbjct: 299 KINEDIPVFPISAVTKTGLRELLLAIADKL 328 >gi|90411950|ref|ZP_01219958.1| putative GTP1/Obg family protein [Photobacterium profundum 3TCK] gi|90327208|gb|EAS43580.1| putative GTP1/Obg family protein [Photobacterium profundum 3TCK] Length = 391 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 141/301 (46%), Positives = 206/301 (68%), Gaps = 6/301 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +GDGG G +SFR EK++ GGPDGG GG GGDV++ A N+NTLIDFR Sbjct: 1 MKFVDEAVIRADAGDGGNGTVSFRTEKYVPRGGPDGGDGGDGGDVYLLADENVNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ GE G N +G +GED +LTVPVGT+ +E+ +I DL G ++++A G Sbjct: 61 FERFHAAERGENGRGGNCTGHRGEDKILTVPVGTRAIDEETGEVIADLTDHGVKVMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP + G G+ + + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKSMGSKGEIRHLRLELLLLADVGMLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVRVDAERSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ L + ++ A+ I++EL Y+ +L K + +++D + + K +E Sbjct: 241 LLHMIDLLPADGSDPIENAF-TIINELDKYSDKLANKPRWLIFNKVDLLSEEDTQAKISE 299 Query: 296 L 296 + Sbjct: 300 V 300 >gi|54307611|ref|YP_128631.1| GTPase ObgE [Photobacterium profundum SS9] gi|81828872|sp|Q6LV46|OBG_PHOPR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|46912034|emb|CAG18829.1| putative GTP1/Obg family protein [Photobacterium profundum SS9] Length = 390 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 141/301 (46%), Positives = 206/301 (68%), Gaps = 6/301 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +GDGG G +SFR EK++ GGPDGG GG GGDV++ A N+NTLIDFR Sbjct: 1 MKFVDEAVIRADAGDGGNGTVSFRTEKYVPRGGPDGGDGGDGGDVYLLADENVNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ GE G N +G +GED +LTVPVGT+ +E+ +I DL G +++++ G Sbjct: 61 FERFHAAERGENGRGGNCTGHRGEDKILTVPVGTRAIDEETGEVIADLTDHGVKVMVSKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP + G G+ + + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKSMGSKGEIRHLRLELLLLADVGMLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVRVDAERSFVIADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ L + V+ A+ I++EL Y+ +L K + +++D + + K +E Sbjct: 241 LLHMIDLLPADGSDPVENAF-TIINELDKYSDKLANKPRWLIFNKVDLLSEEDTQAKISE 299 Query: 296 L 296 + Sbjct: 300 V 300 >gi|260767129|ref|ZP_05876074.1| GTP-binding protein Obg [Vibrio furnissii CIP 102972] gi|260617884|gb|EEX43058.1| GTP-binding protein Obg [Vibrio furnissii CIP 102972] gi|315181272|gb|ADT88186.1| GTP1/Obg family protein [Vibrio furnissii NCTC 11218] Length = 392 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 152/342 (44%), Positives = 221/342 (64%), Gaps = 9/342 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SF REKF+ GGPDGG GG GGDV+IQA NLNTL+D+R Sbjct: 1 MKFVDEAVIKVEAGDGGNGVVSFWREKFVTKGGPDGGDGGDGGDVYIQADENLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ + A+ G+ G N +G +G+D+ L VPVGT+ + ++ ++ + G+++++A G Sbjct: 61 FQRFYAAERGQNGGGGNCTGKRGKDITLKVPVGTRAVDIHTNEIVGEVAEHGKKVMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTMGTKGEVRELRLELLLLADVGMLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ L E Q A I+DEL Y+ +L KK + ++ D + + K E Sbjct: 241 LLHMIDILPIDGSEPAQNAL-TIMDELEQYSEKLAKKPVWLVFNKTDLMLEEEAEEKIQE 299 Query: 296 -LATQCGQVP-FEFSSITGHGIPQILECLHDKIFSI-RGENE 334 L + P F+ S++ G ++ L D + ++ RG E Sbjct: 300 ILDALAWEGPYFKISAVNKQGTAELCRELADFMETLPRGAEE 341 >gi|256846577|ref|ZP_05552034.1| obg family GTPase CgtA [Fusobacterium sp. 3_1_36A2] gi|256718346|gb|EEU31902.1| obg family GTPase CgtA [Fusobacterium sp. 3_1_36A2] Length = 428 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 142/335 (42%), Positives = 217/335 (64%), Gaps = 6/335 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + +++G+GG G +FRREKF++FGGPDGG GG+GGDV A SN+NTLIDF+++ Sbjct: 2 FIDEVIITVKAGNGGDGSAAFRREKFVQFGGPDGGDGGKGGDVVFIADSNINTLIDFKFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA +GE G K+ G KGED+++ VPVGTQV + LI D+ G++ +L GG Sbjct: 62 KLFKAGNGENGQKKQMYGKKGEDLIIKVPVGTQVRDFTTGKLILDMSVNGEQRVLLRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN HFK+S +AP A G G E + L+LKL+AD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGYGNVHFKNSIRKAPKIAEKGGEGTEIKVKLELKLLADVALVGYPSVGKSSFINKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K+ Y FTTL P LG+V+ G K F++ADIPG+I+ AH+G G+GD+FLKH ER ++ Sbjct: 182 NSKVGSYHFTTLEPKLGVVRLGEGKSFVIADIPGLIEGAHEGVGLGDKFLKHIERCKMIY 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 HIV A E + ++ I EL ++ +L K +IV +++D + D + + K+ LA Sbjct: 242 HIVDAAEIEGRDCIEDFEKINYELKKFSEKLAGKKQIVIANKMDLIWDMEKYNKFKDYLA 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + ++ + S + G+ ++L ++ + I E Sbjct: 302 EKGIEI-YPVSVLLNEGLKEVLYKTYNMLSHIERE 335 >gi|121590768|ref|ZP_01678097.1| GTP-binding protein, GTP1/Obg family [Vibrio cholerae 2740-80] gi|121547370|gb|EAX57484.1| GTP-binding protein, GTP1/Obg family [Vibrio cholerae 2740-80] Length = 395 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 136/291 (46%), Positives = 201/291 (69%), Gaps = 4/291 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +++GDGG G +SF REKF+ GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 6 MKFVDEAVIKVQAGDGGNGVVSFWREKFVTNGGPDGGDGGDGGDVYMVADENLNTLIDYR 65 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ G+ G N +G G+D L VPVGT+ + +I ++ + G+++++A G Sbjct: 66 FQRFYEAERGKNGGGGNCTGKSGKDKELRVPVGTRAVDIHTNEIIGEVAEHGKKVMIAKG 125 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSS N++P G G+ + I L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 126 GWHGLGNARFKSSVNRSPRQKTLGTKGELRDIRLELLLLADVGMLGMPNAGKSTFIRAVS 185 Query: 181 RAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 186 AAKPKVADYPFTTLVPSLGVVSVLPEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 245 Query: 240 LLHIVSAL-EENVQAAYQC--ILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH++ + + A+ I+DEL Y+ +L KK + +++D + + Sbjct: 246 LLHMIDVMPADQSDPAHNALTIIDELEQYSEKLAKKPRWLVFNKVDLMSEE 296 >gi|256419883|ref|YP_003120536.1| GTP-binding protein Obg/CgtA [Chitinophaga pinensis DSM 2588] gi|256034791|gb|ACU58335.1| GTP-binding protein Obg/CgtA [Chitinophaga pinensis DSM 2588] Length = 359 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 208/329 (63%), Gaps = 7/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ +SG GGAG F R K+ GPDGG GGRGG + ++ S L TL+ R+ Sbjct: 6 FVDYIRIFAKSGKGGAGSAHFMRTKYNPEAGPDGGDGGRGGHIILRGNSQLWTLLHLRWY 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++ A+ G G N +G GEDV++ VP+GTQ F+E+ L ++ Q+G+ ++ GG Sbjct: 66 KNVVAEDGGNGRDNNSTGRNGEDVIIEVPLGTQAFDEETGDLEAEILQDGEEVVWISGGQ 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F+S+TNQAP YA PG+ E L+LK++AD+G++G PNAGKST L+++T A Sbjct: 126 GGRGNNFFRSATNQAPDYAQPGMPSIEGWKVLELKILADVGLVGFPNAGKSTLLSTITAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADY FTTL PNLG+V + F +AD+PGII+ AH+G G+G RFL+H ER VLL Sbjct: 186 RPKIADYAFTTLTPNLGMVPYRNDRSFAIADLPGIIEGAHEGKGLGHRFLRHIERNSVLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A + + Y +++EL YN EL K ++ +S+ D +D + K +A + Sbjct: 246 FLIPADSADHRKDYDILVNELEQYNPELLDKQFLLAISKSDMLDDEL----KEAIAAELP 301 Query: 302 Q-VPFEF-SSITGHGIPQILECLHDKIFS 328 + +P F SS+T G+ ++ + L + S Sbjct: 302 EGIPVVFISSVTQQGLSELKDMLWQALNS 330 >gi|225165530|ref|ZP_03727352.1| GTP-binding protein Obg/CgtA [Opitutaceae bacterium TAV2] gi|224800228|gb|EEG18636.1| GTP-binding protein Obg/CgtA [Opitutaceae bacterium TAV2] Length = 399 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 137/334 (41%), Positives = 209/334 (62%), Gaps = 14/334 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + ++GDGG G ISFRREK+ +GGP+GG GG+GGDV + + N LIDF+Y+ Sbjct: 41 FIDECVIKAKAGDGGDGAISFRREKYEPWGGPNGGDGGKGGDVVLIGDDDTNNLIDFKYK 100 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H+ A+ GE G + +G +G+ +L VP+GT V E+ + ++ ++GQRI+L GGN Sbjct: 101 PHWNAERGEYGRGADCNGHEGKSAILKVPLGTVVINEETGEAVTEVIEDGQRIVLCKGGN 160 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN HFKS+TN+AP +NPG G+ L LK IAD+G++G PNAGKS+ +T+A Sbjct: 161 GGWGNTHFKSATNRAPKRSNPGQPGEGGTYRLILKSIADVGLVGFPNAGKSSLTNLITKA 220 Query: 183 KPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 + K A YPFTTL P +G+++ E Y +LAD+PG+I+ A + G+G RFL+H ER +L Sbjct: 221 RSKTAPYPFTTLQPQIGVIEYPETYDRLLLADVPGLIEGASENRGLGHRFLRHIERCTLL 280 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID-TVDSDTLAR--KKN 294 + ++ E + + Y +L EL AY+ L KK +V +++D T + AR +++ Sbjct: 281 MFLIDMAGTDERDPRDDYATLLAELKAYDPALLKKPRLVVANKMDETASTANYARFVRRH 340 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 ++ P S +T GIP +L L + + Sbjct: 341 KIK------PLPISCLTEEGIPALLRALRKGVIA 368 >gi|281422202|ref|ZP_06253201.1| Obg family GTPase CgtA [Prevotella copri DSM 18205] gi|281403707|gb|EFB34387.1| Obg family GTPase CgtA [Prevotella copri DSM 18205] Length = 386 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 141/328 (42%), Positives = 211/328 (64%), Gaps = 5/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ RSG GG G + R K+ GGPDGG GGRGG ++++ N TL+ +YQ Sbjct: 6 FVDYVKIQCRSGKGGKGSMHLRHVKYQPNGGPDGGDGGRGGSIYLRGNHNYWTLLHLKYQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HF A+HG G + G G+D+ + VP GT V+ + +CD+ +GQ ++L GG Sbjct: 66 RHFFAEHGGNGGRDKCHGTDGKDIYIDVPCGTVVYNAETGKFVCDVAYDGQEVLLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F++STNQAP YA PG QE I ++LKL+AD+G++G PNAGKST L++V+ A Sbjct: 126 GGLGNFQFRTSTNQAPRYAQPGEPMQEMTIIMELKLLADVGLVGFPNAGKSTLLSAVSSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+YPFTTL P+LGIV ++ F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 RPKIANYPFTTLEPSLGIVDYRDHQSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V ++++ Y+ +L EL +N E+ K ++ +++ D +D + + K L T Sbjct: 246 FMVPGDTDDIKKEYEVLLGELKNFNPEMLDKHRVLAITKCDLLDEELIEMLKETLPT--- 302 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFS 328 +P F SS+TG GI ++ + L ++ S Sbjct: 303 DLPVVFISSVTGQGIQELKDVLWKELNS 330 >gi|313679432|ref|YP_004057171.1| GTP-binding protein obg/cgta [Oceanithermus profundus DSM 14977] gi|313152147|gb|ADR35998.1| GTP-binding protein Obg/CgtA [Oceanithermus profundus DSM 14977] Length = 415 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 138/320 (43%), Positives = 218/320 (68%), Gaps = 3/320 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D ++ + +G GG G +SF REK+I GGPDGG GGRGG V+++A S +++L + Sbjct: 2 FRDTLEITVAAGHGGDGVVSFFREKYIPKGGPDGGDGGRGGSVYLKAGSGVDSLAKL-SK 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA+ G+ G + G G+D+V+ VP+GT+V++ D L+ DL +EGQ ++A GG Sbjct: 61 RTYKAERGQHGKGKGMDGRAGKDLVIEVPLGTRVYDADTGELLADLVEEGQTALVARGGE 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHF ++T QAP +A G+ G+++ + L+L+LIAD+G++G PNAGKS+ LA++TRA Sbjct: 121 GGLGNAHFATATRQAPRFALGGLPGEKRRLRLELRLIADVGLVGYPNAGKSSLLAALTRA 180 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PK+ADYPFTTL PNLG+V+ + F LADIPGII+ A +G G+G FL+H RT +LL+ Sbjct: 181 RPKVADYPFTTLSPNLGVVEGELERFTLADIPGIIEGASEGRGLGLDFLRHISRTRLLLY 240 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQ 302 ++ A E +AA + E+ AY+ +L ++ +V L+++D +D + + + LA + G Sbjct: 241 VLDATREP-RAALAALRREVGAYDPDLLRRPSLVALNKVDLLDEAAVRERVHALAAE-GL 298 Query: 303 VPFEFSSITGHGIPQILECL 322 S++TG G+ ++ + L Sbjct: 299 AVVPTSAVTGAGLDELKQAL 318 >gi|315282455|ref|ZP_07870865.1| Obg family GTPase CgtA [Listeria marthii FSL S4-120] gi|313613894|gb|EFR87628.1| Obg family GTPase CgtA [Listeria marthii FSL S4-120] Length = 443 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 210/329 (63%), Gaps = 7/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y+++G+GG G ++FRREKF+ GGP GG GG+G DV L TL+DFR++ Sbjct: 16 FVDQVKIYVKAGNGGDGMVAFRREKFVPNGGPAGGDGGKGADVVFVVDEGLRTLVDFRFK 75 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+HGE GM ++ G D+V+ VP GT V + D +I DL GQR ++A G Sbjct: 76 RIFKAEHGEHGMSKSMHGRGASDLVVKVPQGTIVKDIDTGEIIADLVAHGQRAVIAKAGR 135 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 136 GGRGNKRFATPANPAPELSENGEPGQERNVQLELKVLADVGLVGFPSVGKSTLLSVVSAA 195 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA Y FTT+ PNLG+V G + F++AD+PG+I+ A QG G+G +FL+H ERT V++ Sbjct: 196 RPKIAAYHFTTIVPNLGMVDAGDGRSFVMADLPGLIEGASQGVGLGHQFLRHIERTRVIV 255 Query: 242 HIV--SALEENVQ-AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S E V Y I +EL YN L ++ +I+ +++D D+ + L K ++A Sbjct: 256 HVIDMSGSEGRVPFDDYVAINNELEQYNLRLMERPQIIVANKMDMPDAEENLKEFKTKIA 315 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI 326 P S++T G+ ++L + DK+ Sbjct: 316 EDIPVFP--ISAVTKTGLRELLLAIADKL 342 >gi|308233934|ref|ZP_07664671.1| GTP-binding protein Obg/CgtA [Atopobium vaginae DSM 15829] gi|328943945|ref|ZP_08241410.1| Spo0B-associated GTP-binding protein [Atopobium vaginae DSM 15829] gi|327491914|gb|EGF23688.1| Spo0B-associated GTP-binding protein [Atopobium vaginae DSM 15829] Length = 489 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 135/341 (39%), Positives = 214/341 (62%), Gaps = 12/341 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D ++++ GDGGAG +SFRRE ++ GGPDGG GG GG + ++A +++++L+ FR++ Sbjct: 6 FTDLCHIFVKGGDGGAGCMSFRREAYVPKGGPDGGDGGEGGSIILRAKTSVSSLVAFRFK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISL-----ICDLDQEGQRIIL 117 HF+A+ G G + G GE ++L VPVGT V E D ++ + DL +GQ +++ Sbjct: 66 HHFRAERGTHGQGARKHGKDGESLILDVPVGTVVRELDPKTMKPLYTLADLTVDGQEVVV 125 Query: 118 APGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 A GG+GG GN HF +S ++P +A G QE I L++K++AD ++G+P+ GKS+ +A Sbjct: 126 AQGGHGGRGNIHFVTSVRRSPAFAEKGEPAQEHWIELEMKVMADAALVGMPSVGKSSLIA 185 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTE 235 ++ A+PKIADYPFTTL PNLG+V+ GY F++AD+PG+I+ A +G G+G +FL+H E Sbjct: 186 RLSAARPKIADYPFTTLVPNLGMVRAASGYS-FVVADVPGLIEGASEGKGLGHQFLRHIE 244 Query: 236 RTHVLLHIVS---ALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 R+ ++LH+V LE + Y I +EL AY EL ++ +IV ++ D + Sbjct: 245 RSALILHVVDITGGLESRDPVLDYHTINNELEAYAPELSQRPQIVLANKCDMPHNTQALE 304 Query: 292 KKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + LA G E S++TG GI + +++ +R E Sbjct: 305 ELKRLALAAGHSFIEVSALTGKGIETLKNVCASQVYELRKE 345 >gi|269797872|ref|YP_003311772.1| GTP-binding protein Obg/CgtA [Veillonella parvula DSM 2008] gi|269094501|gb|ACZ24492.1| GTP-binding protein Obg/CgtA [Veillonella parvula DSM 2008] Length = 423 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 135/322 (41%), Positives = 213/322 (66%), Gaps = 4/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A+V++++GDGG G SFRREK++ GGP GG GG+G DV +A N+NTL+DFRY+ Sbjct: 2 FIDRARVFVKAGDGGDGMSSFRREKYVPNGGPSGGDGGKGADVVFKADKNINTLVDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA G G N+ G + +++ VP+GT + +E+ + CDL +G ++A GG Sbjct: 62 RQFKAPAGGNGESSNKHGRGSDPLIIPVPLGTVIIDEETGKIFCDLVNDGDTFVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F++S N+AP +A G G+E + L+LK++AD+G++G P+ GKS+ L V++A Sbjct: 122 GGRGNARFQTSANRAPTFAEKGEPGEEFWLQLELKVLADVGLLGYPSVGKSSILRKVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P++A Y FTTL P LG+V G + F+LADIPG+I+ A +G G+G FL+H ERT++L+ Sbjct: 182 QPEVAAYHFTTLTPVLGVVTISGDRSFVLADIPGLIEGASEGVGLGHNFLRHVERTNILI 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+ VS +E + + + I +EL Y+ +L K +IV L++ID V DT + + Sbjct: 242 HVLDVSGMEGRDPKVDFDAINEELRKYSEKLANKKQIVALNKIDMVFDDTTIPETKKYFE 301 Query: 299 QCGQVPFEFSSITGHGIPQILE 320 G F ++++G G+ +++E Sbjct: 302 DKGYEVFLINALSGEGLSELME 323 >gi|229495272|ref|ZP_04389007.1| Obg family GTPase CgtA [Porphyromonas endodontalis ATCC 35406] gi|229317715|gb|EEN83613.1| Obg family GTPase CgtA [Porphyromonas endodontalis ATCC 35406] Length = 392 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 140/325 (43%), Positives = 207/325 (63%), Gaps = 3/325 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G FRREK+I GGPDGG GG GG ++I+A N TL+ R+ Sbjct: 6 FVDYVKIYCRSGKGGRGSAHFRREKYIPKGGPDGGDGGNGGSIYIRANRNYWTLLHLRFN 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A GE G ++G+ G DV++ VP+GT V++ I D+ + ++ +L GG Sbjct: 66 RHIYAPSGESGAGALKTGSSGSDVIIEVPLGTSVYDATTGEFILDVTRHEEQKLLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ FK++TNQAP +A PG QE+ I L+LK +AD+G++GLPNAGKST L+++T A Sbjct: 126 GGKGNSFFKNATNQAPRFAQPGEPAQEREIILQLKTLADVGLVGLPNAGKSTLLSAITAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADYPFTTL PNLGIV + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 KPKIADYPFTTLVPNLGIVSYRDNRSFVMADIPGIIEGAAEGKGLGLRFLRHIERNSILL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ E++ Y+ +L EL YN L K ++ +++ D D + + + E+ + Sbjct: 246 FMIPIDTEHIYREYEVLLAELLKYNPGLGSKRRLLAITKCDLADDELIEMVREEIPQELP 305 Query: 302 QVPFEFSSITGHGIPQILECLHDKI 326 V S++ G+ ++ + L ++ Sbjct: 306 HV--FISAVAQRGLTELKDLLWQEL 328 >gi|229552152|ref|ZP_04440877.1| GTP-binding protein [Lactobacillus rhamnosus LMS2-1] gi|258539566|ref|YP_003174065.1| GTPase ObgE [Lactobacillus rhamnosus Lc 705] gi|229314454|gb|EEN80427.1| GTP-binding protein [Lactobacillus rhamnosus LMS2-1] gi|257151242|emb|CAR90214.1| GTP-binding protein [Lactobacillus rhamnosus Lc 705] Length = 428 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 144/325 (44%), Positives = 205/325 (63%), Gaps = 9/325 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ +V +++G GG G ++FRREKF+ FGGP GG GGRGG + + L TL+DFRYQ Sbjct: 2 FVDQVQVEVQAGKGGDGMVAFRREKFVPFGGPAGGDGGRGGSIILYVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G G ++ G ED + VP GT V + D ++ DL GQ +++A GG Sbjct: 62 RHFKAPAGGNGQGKSMYGRAAEDRRIAVPAGTTVTDADTGEVLGDLTAPGQELVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S N AP A G GQ + I L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 122 GGRGNIHFVSPKNTAPEIAENGEPGQHRFIKLELKVLADVGLVGFPSVGKSTLLSVVTQA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V+ + +F++AD+PG+I+ A QG G+G +FL+H ERT VLL Sbjct: 182 KPKIAAYQFTTLVPNLGMVQLDDGTDFVMADLPGLIEGASQGVGLGIQFLRHVERTRVLL 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H+V EN + Y I EL AY+ + K+ E++ +++D ++ A K L Sbjct: 242 HLVEMDPENGREPLEDYDQIRKELGAYDENILKRPELIVATKMDLPGAAERFASFKAALV 301 Query: 298 TQCGQVP---FEFSSITGHGIPQIL 319 + G P FE SS+T G+ ++ Sbjct: 302 DR-GIDPANIFEISSLTHRGVMPLM 325 >gi|148977511|ref|ZP_01814100.1| GTPase ObgE [Vibrionales bacterium SWAT-3] gi|145963306|gb|EDK28572.1| GTPase ObgE [Vibrionales bacterium SWAT-3] Length = 390 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 145/321 (45%), Positives = 210/321 (65%), Gaps = 8/321 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA V I +GDGG G +SF REKF+ GGPDGG GG GGDV+IQA NLNTLID+R Sbjct: 1 MKFVDEAVVKIEAGDGGNGTVSFWREKFVAKGGPDGGDGGDGGDVYIQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ + A+ GE G N +G +G+D+ L VPVGT+ + ++ ++ + G+++++ G Sbjct: 61 FQRFYNAERGENGRGGNCTGKRGKDITLKVPVGTRAVDIHTNEIVAEVAEHGKKVMVGKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ SV+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTMGTKGEVRELRLELLLLADVGMLGLPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + + +Q A I+DEL Y+ ++ +K + +++D + + K E Sbjct: 241 LLHMIDIMPIDGSDPIQNAL-TIIDELEQYSEKVAQKPRWLVFNKVDLMPEEEADEKIQE 299 Query: 296 LATQCGQVP--FEFSSITGHG 314 + G F+ S++ G Sbjct: 300 IIDALGWEDEYFKISAVNKMG 320 >gi|199598731|ref|ZP_03212145.1| GTPase ObgE [Lactobacillus rhamnosus HN001] gi|199590419|gb|EDY98511.1| GTPase ObgE [Lactobacillus rhamnosus HN001] gi|259649671|dbj|BAI41833.1| putative GTPase [Lactobacillus rhamnosus GG] Length = 428 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 144/325 (44%), Positives = 205/325 (63%), Gaps = 9/325 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ +V +++G GG G ++FRREKF+ FGGP GG GGRGG + + L TL+DFRYQ Sbjct: 2 FVDQVQVEVQAGKGGDGMVAFRREKFVPFGGPAGGDGGRGGSIILYVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G G ++ G ED + VP GT V + D ++ DL GQ +++A GG Sbjct: 62 RHFKAPAGGNGQGKSMYGRAAEDRRIAVPAGTTVTDADTGEVLGDLTAPGQELVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S N AP A G GQ + I L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 122 GGRGNIHFVSPKNTAPEIAENGEPGQHRFIKLELKVLADVGLVGFPSVGKSTLLSVVTQA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V+ + +F++AD+PG+I+ A QG G+G +FL+H ERT VLL Sbjct: 182 KPKIAAYQFTTLVPNLGMVQLDDGTDFVMADLPGLIEGASQGVGLGIQFLRHVERTRVLL 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H+V EN + Y I EL AY+ + K+ E++ +++D ++ A K L Sbjct: 242 HLVEMDPENGREPLEDYDQIRKELGAYDENILKRPELIVATKMDLRGAAERFASFKAALV 301 Query: 298 TQCGQVP---FEFSSITGHGIPQIL 319 + G P FE SS+T G+ ++ Sbjct: 302 DR-GIDPANIFEISSLTHRGVMPLM 325 >gi|88859036|ref|ZP_01133677.1| GTPase (Obg family) involved in ribosome maturation [Pseudoalteromonas tunicata D2] gi|88819262|gb|EAR29076.1| GTPase (Obg family) involved in ribosome maturation [Pseudoalteromonas tunicata D2] Length = 384 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 148/308 (48%), Positives = 207/308 (67%), Gaps = 13/308 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE +V +GDGG+G +SFRREKFI GGPDGG GG GG V+ +A NLNTLID++ Sbjct: 1 MKFVDEVEVRAEAGDGGSGAVSFRREKFIPEGGPDGGDGGDGGSVYFEADENLNTLIDYQ 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ +A+ G G +G KG+D+VL VPVGT+V + + + DL + GQR+++A G Sbjct: 61 FERFHRAERGTNGRGAKCTGKKGDDLVLKVPVGTRVSDVETAESMGDLTRHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSTNRAPRQKTLGTKGEIRNLRLELLLLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL PNLG+V+ K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPNLGVVRPDVNKSFVIADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHI+ + + V+ A I+ EL Y+ EL K + ++ID + +D E Sbjct: 241 LLHIIDIMPADGSDPVENA-NAIVGELERYSPELASKPRWIVFNKIDLLPAD-------E 292 Query: 296 LATQCGQV 303 + T C ++ Sbjct: 293 VDTLCSEI 300 >gi|302846140|ref|XP_002954607.1| hypothetical protein VOLCADRAFT_65003 [Volvox carteri f. nagariensis] gi|300260026|gb|EFJ44248.1| hypothetical protein VOLCADRAFT_65003 [Volvox carteri f. nagariensis] Length = 480 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 146/330 (44%), Positives = 210/330 (63%), Gaps = 7/330 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+ D +++YI++GDGG G ++FRREKF+E GGP GG+GGRGG+VW A LN+L FR Sbjct: 1 MRCFDTSRIYIKAGDGGNGCVAFRREKFVEHGGPSGGNGGRGGNVWAVADDGLNSLSTFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGIS---LICDLDQEGQRIIL 117 Q HF+A +G G N GA ED+++ VP+GT V D S + +L GQR +L Sbjct: 61 GQVHFRADNGVNGQGSNCDGADAEDLMVKVPLGTIVRRRDAGSDEPPLAELITPGQRALL 120 Query: 118 APGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 A GG GG GN FK++ ++AP A G G+E + L+LK++AD+GIIG+PNAGKST L+ Sbjct: 121 AAGGRGGRGNFSFKTARDRAPTIAEKGEKGEELWVDLELKVVADVGIIGVPNAGKSTLLS 180 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 VT A+PKIA+YPFTTL PNLG+ + Y+ + AD+PG+++ AH+G G+G FL+H +R Sbjct: 181 VVTAARPKIANYPFTTLVPNLGVCEMDYRTTVFADVPGLLEGAHEGLGLGHEFLRHVQRC 240 Query: 238 HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 VL+H++ + + I EL +N LR K +IV ++IDT DS D ++L Sbjct: 241 RVLVHVIDGTSPDPVGDFNAINLELELFNPGLRDKPQIVAYNKIDTPDSGDFWELVADQL 300 Query: 297 ATQCGQVP---FEFSSITGHGIPQILECLH 323 + G P F S+ TG G+ ++ + Sbjct: 301 TNEYGVAPDRLFPISAATGQGVTALVRAVR 330 >gi|237785936|ref|YP_002906641.1| GTPase ObgE [Corynebacterium kroppenstedtii DSM 44385] gi|237758848|gb|ACR18098.1| putative GTP-binding protein [Corynebacterium kroppenstedtii DSM 44385] Length = 513 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 146/347 (42%), Positives = 212/347 (61%), Gaps = 18/347 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++R+GDGG G S REKF+ GGPDGG+GG GGDV ++ ++ ++TL+DF + Sbjct: 3 QFVDRVVLHVRAGDGGHGCASIHREKFVPLGGPDGGNGGHGGDVILEVSNQVHTLVDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H KA G G NR+GA+GED+VL VP GT V E DG +++ DL G R +A GG Sbjct: 63 HPHIKATRGGNGAGDNRNGARGEDLVLPVPDGTVVTEPDG-TVVADLMGVGTRFTIAEGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+EK + L+LK IAD+G++G P+AGKS+ ++ ++ Sbjct: 122 YGGLGNAALVSKARRAPGFALLGEPGEEKDVVLELKSIADVGLVGYPSAGKSSLISVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V F +AD+PG+I A +G G+G FL+H ER V+ Sbjct: 182 AKPKIADYPFTTLTPNLGVVMVDNDAFTIADVPGLIPGASEGRGLGLDFLRHIERCAVIA 241 Query: 242 HIVS---------------ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 H+V ALEE + AAYQ LD + +LR++ ++ L+++D D+ Sbjct: 242 HVVDPAALEADRNPVDDIRALEEEL-AAYQTALDHDTGLG-DLRERPRVIVLTKMDVPDA 299 Query: 287 DTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 +A + E Q G F SS+ G+ ++ L + + R E+ Sbjct: 300 RDMAELEKESLEQFGWPIFTISSVAHEGLDELRFGLWEIVKKYRSEH 346 >gi|255693745|ref|ZP_05417420.1| Obg family GTPase CgtA [Bacteroides finegoldii DSM 17565] gi|260620461|gb|EEX43332.1| Obg family GTPase CgtA [Bacteroides finegoldii DSM 17565] Length = 362 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 137/306 (44%), Positives = 197/306 (64%), Gaps = 5/306 (1%) Query: 23 FRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAK 82 RREK+ GGPDGG GGRGG + ++ N TL+ ++ +H A HGE G K G Sbjct: 1 MRREKYCPNGGPDGGDGGRGGHIILRGNRNYWTLLHLKFDRHAMAGHGESGSKGRSFGKD 60 Query: 83 GEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYAN 142 GED V+ VP GT V+ + ICD+ ++GQ +IL GG GG GN HFK++T QAP +A Sbjct: 61 GEDKVIEVPCGTVVYNAETGEYICDVTEDGQEVILLKGGRGGQGNWHFKTATRQAPRFAQ 120 Query: 143 PGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK 202 PG QE + ++LKL+AD+G++G PNAGKST L+S++ AKPKIADYPFTTL PNLGIV Sbjct: 121 PGEPMQEMTVIMELKLLADVGLVGFPNAGKSTLLSSISAAKPKIADYPFTTLEPNLGIVS 180 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDE 261 K F++ADIPGII+ A QG G+G RFL+H ER +LL +V A ++++ Y +L+E Sbjct: 181 YHDGKSFVMADIPGIIEGASQGKGLGLRFLRHIERNSLLLFMVPADSDDIRKEYDILLNE 240 Query: 262 LSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILE 320 L +N E+ K ++ +++ D +D + + + L +P F SS++G GI + + Sbjct: 241 LRTFNPEMLDKQRVLAITKSDMLDQELMDEIEPTLPE---GIPHVFISSVSGLGISVLKD 297 Query: 321 CLHDKI 326 L +++ Sbjct: 298 ILWEEL 303 >gi|302381040|ref|ZP_07269500.1| Obg family GTPase CgtA [Finegoldia magna ACS-171-V-Col3] gi|302311087|gb|EFK93108.1| Obg family GTPase CgtA [Finegoldia magna ACS-171-V-Col3] Length = 421 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 142/333 (42%), Positives = 215/333 (64%), Gaps = 4/333 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+ +++G GG G ++FRREK+ GGP GG GG GG + I ++ TL+D+ Y+ Sbjct: 2 FIDVAKIELKAGKGGDGSVAFRREKYEPSGGPAGGDGGDGGSIIIVGDKDIKTLMDYSYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +KA++G G + + G KGED++L VPVGT V + D ++I D+ + + ++ GG Sbjct: 62 SIYKAENGGDGRNKKQFGKKGEDLILKVPVGTLVKDYDTDTVIYDVKHDKEEFVICKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSS QAP +A PG G+EK I L+LKL+AD+G+IGLPN GKST L+ ++ A Sbjct: 122 GGKGNVHFKSSIRQAPRFAEPGEKGEEKTIKLELKLLADVGLIGLPNVGKSTLLSIMSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIA+Y FTTL PNLG+ K G K F+LADIPG+I+ A +G G+G FLKH ERT +L+H Sbjct: 182 RPKIANYHFTTLEPNLGVCKVGEKSFVLADIPGLIEGASEGLGLGHDFLKHIERTKILVH 241 Query: 243 I--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 + +S E N ++ I ELS+YN +L K +V L++ D + + + + + + Sbjct: 242 VLDISGSEGRNPIEDFELINSELSSYNIKLNDKKMLVVLNKTDLGAEENIKEFREKYSDK 301 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 ++ E S+ T + +++ + D + SI + Sbjct: 302 VDEI-VEISAATTENVDKLMYLIADTLDSIEDD 333 >gi|114330960|ref|YP_747182.1| GTPase ObgE [Nitrosomonas eutropha C91] gi|122314129|sp|Q0AHG5|OBG_NITEC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|114307974|gb|ABI59217.1| GTP1/OBG sub domain protein [Nitrosomonas eutropha C91] Length = 343 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 153/322 (47%), Positives = 215/322 (66%), Gaps = 9/322 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MK++DE K+ + +GDGG G SFRREKFI GGPDGG GGRGG ++ A NLNTLID+R Sbjct: 1 MKYIDEVKIQVFAGDGGNGVASFRREKFIPKGGPDGGDGGRGGSIYALADHNLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + F+A+ GE G + G ED+VL +PVGT + + L+ DL Q Q+++LA G Sbjct: 61 FTPVFRAKRGENGRGSDCYGKGAEDIVLRMPVGTIITDYMTGELVADLKQNQQKVLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G++ + L+L+++AD+G++GLPNAGKST + +V+ Sbjct: 121 GKGGLGNLHFKSSTNRAPRQFTHGEAGEQFELKLELRVLADVGLLGLPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTLYPNLG+V+ + + FI+ADIPG+I+ A +GAG+G RFLKH RTH+ Sbjct: 181 AARPKVADYPFTTLYPNLGVVRVDAGRSFIMADIPGLIEGAAEGAGLGHRFLKHLSRTHL 240 Query: 240 LLHI--VSALEEN---VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 LLHI V+ +EN VQ+A + ++DEL ++ L +K + +++D + D Sbjct: 241 LLHIIDVAPFDENIDPVQSA-RALVDELRKFDEVLYRKPRWLIFNKVDLLPEDEQQAVCT 299 Query: 295 EL--ATQCGQVPFEFSSITGHG 314 L A F S++TG G Sbjct: 300 HLLQALDWEDRWFAISALTGRG 321 >gi|23099497|ref|NP_692963.1| GTPase ObgE [Oceanobacillus iheyensis HTE831] gi|81746088|sp|Q8EPQ0|OBG_OCEIH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|22777726|dbj|BAC13998.1| Spo0B-associated GTP-binding protein [Oceanobacillus iheyensis HTE831] Length = 426 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 141/333 (42%), Positives = 213/333 (63%), Gaps = 9/333 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ VY+++GDGG G +++RREK++ GGP GG GG G +V + LNTL++FRY Sbjct: 2 FVDQVSVYVKAGDGGNGLVAYRREKYVPKGGPAGGDGGNGSNVVFKVDEGLNTLMEFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFK + GE GM + + G + +V+ VP GT V +ED +I DL + Q ++ GG Sbjct: 62 RHFKGKRGENGMSKTQHGRNADPLVIPVPPGTTVIDEDTGEVIADLTKHEQEAVIVKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G GQE+ I ++LKLIAD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNTRFATPRNPAPDMAENGEPGQERNIKVELKLIADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+V + + F+LAD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIADYHFTTLSPNLGVVDTQDSRSFVLADLPGLIEGASQGIGLGHQFLRHIERTRVIL 241 Query: 242 HIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ + Y+ I ELS Y+ +L + +I+ +++D ++ + L + KNEL Sbjct: 242 HVIDMAGTEGRDPYEDYKKINQELSDYDEKLMDRPQIIAANKMDMPNAQENLIQFKNELE 301 Query: 298 TQCGQVP-FEFSSITGHGIPQILECLHDKIFSI 329 +P +E S++T G+ +L + DK+ +I Sbjct: 302 ---DDIPVYEISALTKDGLRDLLFAIADKLETI 331 >gi|315452953|ref|YP_004073223.1| putative GTP-binding protein Obg [Helicobacter felis ATCC 49179] gi|315132005|emb|CBY82633.1| putative GTP-binding protein Obg [Helicobacter felis ATCC 49179] Length = 331 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 137/312 (43%), Positives = 202/312 (64%), Gaps = 2/312 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV++Q ++N +TL FR + Sbjct: 2 FVDSVEILIASGKGGPGAVSFRREKFVIKGGPDGGDGGDGGDVFVQVSNNTDTLGAFRGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KA++G G + SG KGE V L VP GTQ++++ L+ D + G + L GG Sbjct: 62 KHYKAKNGAPGGPKLCSGKKGESVTLIVPPGTQIYDQQSGELLGDFIECGVPVKLLQGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA FK++ Q P YA G+ G E + L+LKLIAD+G++G PN GKST ++ ++ A Sbjct: 122 GGMGNARFKNAVQQRPTYAQKGLEGVELSVRLELKLIADVGLVGFPNVGKSTLISVISNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V G +KEF++ADIPG+I+ A +G G+G FL+H ERT LL Sbjct: 182 RPKIANYAFTTLVPNLGVVSVGDFKEFVIADIPGVIEGASEGKGLGLAFLRHIERTQFLL 241 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ + +++A YQ + EL A++ L+++ V +++ID + + LA N Sbjct: 242 FVLD-VSLDLEAQYQKLRHELGAFSPILQQRAFGVAINKIDLLPPEELASVLNAFEKSLD 300 Query: 302 QVPFEFSSITGH 313 P ++ H Sbjct: 301 PKPAFILPLSAH 312 >gi|291515741|emb|CBK64951.1| Obg family GTPase CgtA [Alistipes shahii WAL 8301] Length = 340 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 155/333 (46%), Positives = 218/333 (65%), Gaps = 12/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K++ RSG GG G FRREKF+ FGGPDGG GG+GG + +Q TLI +YQ Sbjct: 9 FVDYVKIFARSGHGGGGSTHFRREKFVAFGGPDGGDGGKGGSIVLQGDKQYWTLIHLKYQ 68 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGT---QVFE-EDGISL---ICDLDQEGQRI 115 +H A+ GE G SG D+V+ VP+GT +VFE EDG + + ++ +G+R+ Sbjct: 69 RHQFAEDGEHGSGARSSGKDARDIVIPVPLGTVAKRVFENEDGTATTETVGEVTADGERL 128 Query: 116 ILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTF 175 +L GG GG GN HFKS+TNQ P YA PG G+E L+LK++AD+G++G PNAGKST Sbjct: 129 VLLRGGRGGLGNWHFKSATNQTPRYAQPGEEGEEGTFILELKVLADVGLVGFPNAGKSTL 188 Query: 176 LASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 L+ V+ AKPKIADY FTTL PNLGIV+ +K F++ADIPGII+ AH+G G+G RFL+H Sbjct: 189 LSVVSAAKPKIADYAFTTLEPNLGIVEVRDHKSFVMADIPGIIEGAHEGRGLGTRFLRHI 248 Query: 235 ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 ER VLL ++ A ++++ Y +L EL+ YN EL K ++ +++ D +D D +A + Sbjct: 249 ERNSVLLFLIPADSDDIRRDYDVLLGELTQYNPELLDKERLLAVTKCDMLDEDLIAEMRG 308 Query: 295 ELATQCGQVPFEF-SSITGHGIPQILECLHDKI 326 L VP F SS++G IP++ + L + + Sbjct: 309 HLPE---GVPSVFISSVSGLNIPRLKDMLWEAL 338 >gi|197334219|ref|YP_002155039.1| Obg family GTPase CgtA [Vibrio fischeri MJ11] gi|261277744|sp|B5FGF9|OBG_VIBFM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|197315709|gb|ACH65156.1| Obg family GTPase CgtA [Vibrio fischeri MJ11] Length = 390 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 147/331 (44%), Positives = 214/331 (64%), Gaps = 8/331 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SF REKF+ GGPDGG GG GGDV+++A NLNTLID+R Sbjct: 1 MKFVDEATIKVDAGDGGNGVVSFWREKFVAKGGPDGGDGGDGGDVYLEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + + A+ G+ G N +G +GED+ L VPVGT+ + D + +L G + ++A G Sbjct: 61 FNRFYNAERGKNGSGGNCTGKRGEDITLKVPVGTRAIDIDTGEKVAELMTHGMKQMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTLGTKGEVRELRLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ G K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVRARGNKSFVVADIPGLIEGAADGAGLGVRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ L + VQ A I+DEL Y+ ++ K + ++ D + + K NE Sbjct: 241 LLHVIDILPIDGSDPVQNAL-TIIDELEQYSEKVAGKPRWLLFNKTDLLLEEEADEKINE 299 Query: 296 L--ATQCGQVPFEFSSITGHGIPQILECLHD 324 + A F+ ++++ G ++ + L D Sbjct: 300 ILEALAWEDRYFKIAAVSRTGTQELCDELAD 330 >gi|218281327|ref|ZP_03487815.1| hypothetical protein EUBIFOR_00380 [Eubacterium biforme DSM 3989] gi|218217512|gb|EEC91050.1| hypothetical protein EUBIFOR_00380 [Eubacterium biforme DSM 3989] Length = 432 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 134/327 (40%), Positives = 209/327 (63%), Gaps = 8/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KV+I++G GG G +SFR EK++ +GGP GG GG GGDV +A + TL+D RY Sbjct: 8 FVDQVKVHIKAGKGGDGLVSFRHEKYVAYGGPFGGDGGNGGDVIFEADPGMTTLLDLRYH 67 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + A GEKG + GA GE V+ VP+GT V D ++ DL + QR ++A GG Sbjct: 68 RKIIATPGEKGKNKKMHGANGEHKVVKVPLGTIVKRSDNNQVLADLTKPHQRQVVAHGGR 127 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+SS N AP YA G+LG+E ++L+++AD+G++G P+ GKSTFL +V++A Sbjct: 128 GGRGNWHFRSSHNTAPKYAEQGVLGEEFDCIVELRVLADVGLVGFPSVGKSTFLDAVSKA 187 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+I DYPFTT+ PN+G+V+ G + F+LAD+PG+I+ A G G+G +FL+H ER V++ Sbjct: 188 RPEIGDYPFTTITPNVGVVQTGDGRSFVLADLPGLIEGASDGKGLGHQFLRHIERCRVII 247 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ E+ + Y+ I +EL +Y L ++ +IV +++D ++ R+ E Sbjct: 248 HVIDMGAEDGRDPLKDYEVINNELKSYQIRLLERPQIVVANKMDMENAQENVRRFKE--- 304 Query: 299 QCGQVP-FEFSSITGHGIPQILECLHD 324 + +P +E ++I G+ +L D Sbjct: 305 KYPDIPVYETTTIIHEGLDAVLRKAAD 331 >gi|147677168|ref|YP_001211383.1| GTPase [Pelotomaculum thermopropionicum SI] gi|261277661|sp|A5D410|OBG_PELTS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|146273265|dbj|BAF59014.1| predicted GTPase [Pelotomaculum thermopropionicum SI] Length = 422 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 141/323 (43%), Positives = 214/323 (66%), Gaps = 9/323 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D A+++++ GDGG G ++ RREK++ GGP GG GGRGG+V ++A L TL+DFRY+ Sbjct: 2 FYDRARIFVKGGDGGNGCVAMRREKYVPEGGPWGGDGGRGGNVILRADGGLRTLVDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KA+ G G +N GA GED+V+ VP GT V + LI DL ++GQ ++A GG Sbjct: 62 RHYKAERGRHGEGKNMHGASGEDLVIRVPAGTVVKDAATGELIADLVRDGQEAVVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F + N+AP A G G+E+ + L+LKL+AD+G++G PNAGKST ++ V+ A Sbjct: 122 GGRGNARFVTPQNRAPRMAEKGEPGEERWLDLELKLLADVGLVGFPNAGKSTLISRVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA YPFTT+ PNLG+V+ + + F++ADIPG+I+ AH+GAG+G FL+H ERT +L+ Sbjct: 182 RPKIASYPFTTITPNLGVVRVDDGRSFVMADIPGLIEGAHKGAGLGHDFLRHVERTRLLV 241 Query: 242 HIVSALEENVQAAYQCIL---DELSAYNSELRKKIEIVGLSQIDTVD--SDTLARKKNEL 296 H++ + Q L ELS YN L ++ +++ +++D +D ++ LAR K Sbjct: 242 HVLDTAGSEGRDPVQDFLVTNRELSLYNPALGRRPQVIAANKMD-LDGAAENLARLKEAY 300 Query: 297 ATQCGQVPFEFSSITGHGIPQIL 319 + P S++TG G+ ++ Sbjct: 301 GGKYEIFP--VSAVTGQGLEALV 321 >gi|72383422|ref|YP_292777.1| GTPase ObgE [Prochlorococcus marinus str. NATL2A] gi|123620455|sp|Q46HF4|OBG_PROMT RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|72003272|gb|AAZ59074.1| GTPase [Prochlorococcus marinus str. NATL2A] Length = 329 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 132/327 (40%), Positives = 216/327 (66%), Gaps = 1/327 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A + +++G GG G +FRREK++ GGP GG GG+GG+V ++A NL TL+DF+ Sbjct: 1 MQFIDQAIIDVKAGSGGDGISAFRREKYVPAGGPAGGDGGQGGNVVLEADDNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ A++G++G +GA G+D VL VP GT+V ++ DL +GQ++I+A G Sbjct: 61 FQKLISAENGQRGGPNKCTGASGKDTVLKVPCGTEVRHLSTNIILGDLTNKGQQLIVAFG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GGFGNA + S++N+AP G +G+E + L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GKGGFGNARYLSNSNRAPEKFTEGKVGEEWSLQLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ + + ADIPG+I A +G G+G FL+H ERT V Sbjct: 181 SARPKIADYPFTTLIPNLGVVRRPSGDGTVFADIPGLISGASKGIGLGHDFLRHIERTKV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ + + ++ I +EL++Y L + I L++ + ++ + + + N++ Sbjct: 241 LLHLIDSASTDPINDFKTINEELTSYGHGLISRPRIFVLNKKELLNENEIKKLLNKIEKM 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKI 326 + S++T G+ +L + +++ Sbjct: 301 TMKKVHIISAVTKFGLDDLLSSIWNEL 327 >gi|34762112|ref|ZP_00143120.1| SPO0B-associated GTP-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27888189|gb|EAA25247.1| SPO0B-associated GTP-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 428 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 142/335 (42%), Positives = 216/335 (64%), Gaps = 6/335 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + +++G+GG G +FRREKF++FGGPDGG GG+GGDV A SN+NTLIDF+++ Sbjct: 2 FIDEVIITVKAGNGGDGSAAFRREKFVQFGGPDGGDGGKGGDVVFIADSNINTLIDFKFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA +GE G K+ G KGED+++ VPVGTQV + LI D+ G++ +L GG Sbjct: 62 KLFKAGNGENGQKKQMYGKKGEDLIIKVPVGTQVRDFTTGKLILDMSVNGEQRVLLRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN HFK+S +AP A G G E + L+LKL+AD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGYGNVHFKNSIRKAPKIAEKGGEGAEIKVKLELKLLADVALVGYPSVGKSSFINKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K+ Y FTTL P LG+V+ G K F++ADIPG+I+ AH+G G+GD+FL+H ER ++ Sbjct: 182 NSKVGSYHFTTLEPKLGVVRLGEGKSFVIADIPGLIEGAHEGVGLGDKFLRHIERCKMIY 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 HIV A E + ++ I EL ++ +L K +IV +++D + D + K+ LA Sbjct: 242 HIVDAAEIEGRDCIKDFEKINYELKKFSEKLAGKKQIVIANKMDLIWDMGKYNKFKDYLA 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + ++ + S + G+ ++L +D + I E Sbjct: 302 EKGIEI-YPVSVLLNEGLKEVLYKTYDMLSHIERE 335 >gi|320109243|ref|YP_004184833.1| GTP-binding protein Obg/CgtA [Terriglobus saanensis SP1PR4] gi|319927764|gb|ADV84839.1| GTP-binding protein Obg/CgtA [Terriglobus saanensis SP1PR4] Length = 366 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 139/340 (40%), Positives = 214/340 (62%), Gaps = 11/340 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DEA++ I++GDGG G ++FRREKF+ GGP GG GG GG++ + +++ NTL+ FR+ Sbjct: 2 FIDEARIRIKAGDGGNGCMAFRREKFVPRGGPSGGDGGHGGNILMTSSTQHNTLLQFRFN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 K++ G G N SG GE++VL VPVGTQ+++++ LI D + II+A GG Sbjct: 62 PEHKSERGGHGEGSNCSGTSGENLVLKVPVGTQLYDDETGDLIHDFAHPDETIIVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + T+QAP G G+ + L+LKL+AD+G++G PN GKST ++ ++ A Sbjct: 122 GGRGNQHFATPTHQAPREHELGRPGEARNYRLELKLLADVGLLGYPNVGKSTLISRLSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG----YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 +PKIA+Y FTTL PNLG+V+ G F++AD+PG+I+ A QGAG+G +FL+H ERT Sbjct: 182 RPKIANYAFTTLEPNLGVVQVGEWPHEHSFVIADMPGLIEGASQGAGLGIQFLRHIERTS 241 Query: 239 VLLHIVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 VL H+V + +N ++ I EL+++ L K +V ++ID + D L KK Sbjct: 242 VLAHLVDVSDGSGRDNPVEDFKIIEAELTSFGHGLPSKPVLVVATKIDVANPDKL--KKL 299 Query: 295 ELATQCGQVPF-EFSSITGHGIPQILECLHDKIFSIRGEN 333 + + ++PF S++ G GI ++ + + R +N Sbjct: 300 QAMAKRKKLPFYAISAVAGTGIEELKYAISQAVIDFRRDN 339 >gi|154504426|ref|ZP_02041164.1| hypothetical protein RUMGNA_01930 [Ruminococcus gnavus ATCC 29149] gi|153795355|gb|EDN77775.1| hypothetical protein RUMGNA_01930 [Ruminococcus gnavus ATCC 29149] Length = 442 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 152/332 (45%), Positives = 214/332 (64%), Gaps = 10/332 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK++IRSG GG G SFRRE ++ GGPDGG GGRGGD+ + LNTLID+R++ Sbjct: 17 FADRAKIFIRSGKGGDGHCSFRRELYVPNGGPDGGDGGRGGDLIFEVDEGLNTLIDYRHK 76 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A GE+G KR G G+D+VL VP GT + E +I D+ + +R I+ GG Sbjct: 77 RKYAAGDGEEGGKRKCHGKDGKDLVLRVPEGTVIKESKTGKVIADMSGDNRRQIVLKGGK 136 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF ++T Q P YA PG E + L+LK+IAD+G+IG PN GKSTFL+ VT A Sbjct: 137 GGLGNQHFATATMQVPKYAQPGQPAMELEVNLELKVIADVGLIGFPNVGKSTFLSRVTNA 196 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V EG K F++ADIPG+I+ A +G G+G FL+H ERT +++ Sbjct: 197 QPKIANYHFTTLNPNLGVVDLEGAKGFVVADIPGLIEGASEGVGLGHEFLRHIERTKMMI 256 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKN 294 H+V A + V Y+ I EL AYN E+ K+ +++ ++ D + D D + R K Sbjct: 257 HVVDAAGTEGRDPVDDIYK-INAELQAYNPEIAKRPQVIAANKTDLIYSEDDDPIQRLKE 315 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E Q +V F S ++G G+ ++L + ++I Sbjct: 316 EFEPQGIKV-FPISGVSGQGLKELLYYVSEQI 346 >gi|323493614|ref|ZP_08098735.1| GTPase CgtA [Vibrio brasiliensis LMG 20546] gi|323312137|gb|EGA65280.1| GTPase CgtA [Vibrio brasiliensis LMG 20546] Length = 390 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 141/287 (49%), Positives = 200/287 (69%), Gaps = 6/287 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA V +++GDGG G +SF REKF+ GGPDGG GG GGDV+IQA NLNTLID+R Sbjct: 1 MKFVDEAVVKVQAGDGGNGVVSFWREKFVAKGGPDGGDGGDGGDVYIQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ GE G N +G +G+D VL VPVGT+ + ++ ++ + G++I++A G Sbjct: 61 FQRFYEAERGENGRGGNCTGKRGKDKVLRVPVGTRAVDIHTNEIVAEVAEHGKKIMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTLGTKGEIREVRLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 LLH++ + + V+ A I+DEL Y+ +L K + +++D Sbjct: 241 LLHMIDIMPIDQSDPVENAL-TIIDELEQYSEKLADKPRWLIFNKVD 286 >gi|161582024|ref|NP_230091.2| GTPase ObgE [Vibrio cholerae O1 biovar El Tor str. N16961] gi|255743820|ref|ZP_05417777.1| GTP-binding protein Obg [Vibrio cholera CIRS 101] gi|262147174|ref|ZP_06027980.1| GTP-binding protein Obg [Vibrio cholerae INDRE 91/1] gi|262167599|ref|ZP_06035303.1| GTP-binding protein Obg [Vibrio cholerae RC27] gi|261277913|sp|Q9KUS8|OBG_VIBCH RecName: Full=GTPase Obg/CgtA; AltName: Full=CgtA; AltName: Full=GTP-binding protein Obg gi|255738569|gb|EET93957.1| GTP-binding protein Obg [Vibrio cholera CIRS 101] gi|262023935|gb|EEY42632.1| GTP-binding protein Obg [Vibrio cholerae RC27] gi|262031379|gb|EEY49987.1| GTP-binding protein Obg [Vibrio cholerae INDRE 91/1] gi|327483293|gb|AEA77700.1| GTP-binding protein Obg [Vibrio cholerae LMA3894-4] Length = 390 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 136/291 (46%), Positives = 201/291 (69%), Gaps = 4/291 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +++GDGG G +SF REKF+ GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEAVIKVQAGDGGNGVVSFWREKFVTNGGPDGGDGGDGGDVYMVADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ G+ G N +G G+D L VPVGT+ + +I ++ + G+++++A G Sbjct: 61 FQRFYEAERGKNGGGGNCTGKSGKDKELRVPVGTRAVDIHTNEIIGEVAEHGKKVMIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSS N++P G G+ + I L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GWHGLGNARFKSSVNRSPRQKTLGTKGELRDIRLELLLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVSVLPEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL-EENVQAAYQC--ILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH++ + + A+ I+DEL Y+ +L KK + +++D + + Sbjct: 241 LLHMIDIMPADQSDPAHNALTIIDELEQYSEKLAKKPRWLVFNKVDLMSEE 291 >gi|268679145|ref|YP_003303576.1| GTP-binding protein Obg/CgtA [Sulfurospirillum deleyianum DSM 6946] gi|268617176|gb|ACZ11541.1| GTP-binding protein Obg/CgtA [Sulfurospirillum deleyianum DSM 6946] Length = 368 Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 149/363 (41%), Positives = 214/363 (58%), Gaps = 33/363 (9%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D + + SG GG G +SFRREK + GGPDGG GG+GG+V+ Q N +TL FR Sbjct: 2 FIDHVALTLSSGKGGPGCVSFRREKHVIQGGPDGGDGGKGGNVYFQVDKNTHTLSHFRNN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 QH KA++GE GM R G GE +V+TVP GTQV + + ++ DL EG + + GG Sbjct: 62 QHLKARNGEPGMGRKMYGKSGEHLVVTVPPGTQVIDAETNEVLLDLLDEGDKQLFLEGGM 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSSTNQ P +A PG G K I L+LKLIAD+G++G PN GKST ++ V+ A Sbjct: 122 GGLGNTHFKSSTNQRPEFAQPGRGGLTKAIKLELKLIADVGLVGFPNVGKSTLISVVSNA 181 Query: 183 KPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IA+Y FTTL P LG +V + ++ +++ADIPGII+ A +G G+G FL+H ERT LL Sbjct: 182 QPEIANYEFTTLTPKLGVVVTDDFQSYVMADIPGIIEGASEGKGLGIEFLRHIERTKFLL 241 Query: 242 HIVS-ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT----------------- 283 ++ A +++ Y+ + EL ++ L ++ + LS+ DT Sbjct: 242 FMIDLANYRDLEEQYKTLKKELEKFSPLLAQRDYAIALSRCDTLAPEEINEKVDLFLNLL 301 Query: 284 -VDSDTLARK---KNELATQC-------GQVPF---EFSSITGHGIPQILECLHDKIFSI 329 ++++ LA K + +L T C G +PF SS++ + I L D I + Sbjct: 302 GLNTNDLAHKYKAREDLHTYCQDVYERDGNLPFFVIPLSSVSKINVDAIKYALSDVIRKV 361 Query: 330 RGE 332 R E Sbjct: 362 RDE 364 >gi|300088428|ref|YP_003758950.1| GTP-binding protein Obg/CgtA [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299528161|gb|ADJ26629.1| GTP-binding protein Obg/CgtA [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 417 Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 144/332 (43%), Positives = 210/332 (63%), Gaps = 1/332 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 +D+A++ ++SG+GG G FRREKF+ GGPDGG GGRGG+V IQA ++ TL+ +R+Q Sbjct: 1 MIDQAEIEVKSGNGGRGVTGFRREKFVPRGGPDGGDGGRGGNVIIQADKDMTTLMKYRHQ 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA +G G + SG G DVV+ VPVGT V + + ++ DL ++++ A GG Sbjct: 61 RHFKAGNGSAGAGQRCSGKSGADVVVKVPVGTVVKDRETGEIVGDLTAHREKVVAACGGK 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF SSTNQAP A G+ GQ + + L+LKLIAD GI+GLPNAGKS+ L +V+ A Sbjct: 121 GGLGNTHFASSTNQAPKLAQTGVAGQTRTLVLELKLIADAGIVGLPNAGKSSLLQAVSAA 180 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PK+ YPFTTL P LG+V+ +++AD+PGII++AH G G+G +FL+H RT VL+H Sbjct: 181 RPKVGAYPFTTLEPALGVVEAAGHRWVMADVPGIIEDAHLGKGLGYQFLRHVARTRVLVH 240 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQ 302 ++ + I ELS Y+ + +K +IV +++ID + + Q G Sbjct: 241 LIDGSAQEPVNDMVMINTELSLYDPLVGRKPQIVAVNKIDLPEVKARVAELRRFFKQSGI 300 Query: 303 VPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 P S++T G+ Q+L L D++ E Sbjct: 301 EPLFVSALTSEGMDQLLTEL-DRVLQAESARE 331 >gi|331091105|ref|ZP_08339947.1| GTPase obg [Lachnospiraceae bacterium 2_1_46FAA] gi|330405327|gb|EGG84863.1| GTPase obg [Lachnospiraceae bacterium 2_1_46FAA] Length = 427 Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 148/339 (43%), Positives = 217/339 (64%), Gaps = 10/339 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+YIRSG GG G +SFRRE ++ GGPDGG GGRGGDV + LNTL D+R++ Sbjct: 2 FADRAKIYIRSGKGGDGHVSFRRELYVPNGGPDGGDGGRGGDVIFEIDEGLNTLADYRHR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ GE+G KR G ED++L VP GT + E + +I D+ + +R ++ GG Sbjct: 62 RKYVAKDGEQGGKRRCHGKNAEDIILKVPEGTIIKEAESDKIIADMSGDNRRQVILKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST Q P YA PG QE + L+LK+IAD+G+IG PN GKST L+ VT A Sbjct: 122 GGLGNQHFATSTMQIPKYAQPGQPAQELWVKLELKVIADVGLIGFPNVGKSTLLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 PKIA+Y FTT+ PNLG+V +G F++ADIPG+I+ A +G G+G FL+H ERT +++ Sbjct: 182 NPKIANYHFTTINPNLGVVDIDGADGFVIADIPGLIEGASEGVGLGHEFLRHIERTKMMI 241 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKN 294 H+V A + + Y+ I EL AYN ++ K+ +++ ++ID + D D + R + Sbjct: 242 HVVDAASTEGRDPIDDIYK-INAELKAYNEDIAKRPQVIAANKIDAIYSEDEDPVERIRK 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 E Q +V F S ++G GI ++L + +++ ++ E Sbjct: 301 EFEPQGIKV-FAISGVSGEGIRELLYYVSEQLKTLDQET 338 >gi|302391359|ref|YP_003827179.1| GTP-binding protein Obg/CgtA [Acetohalobium arabaticum DSM 5501] gi|302203436|gb|ADL12114.1| GTP-binding protein Obg/CgtA [Acetohalobium arabaticum DSM 5501] Length = 430 Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 149/329 (45%), Positives = 225/329 (68%), Gaps = 7/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + + +G GG G SFRREKF+ GGPDGG GG GGDV + LNTL++FR Q Sbjct: 2 FVDEVAIEVEAGSGGDGVTSFRREKFVPEGGPDGGDGGPGGDVILTVDKGLNTLLEFREQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA+ GE G ++N+ G+ G+D+++ VP GT V+++ ++ D+ EG ++I+A GG Sbjct: 62 KIYKAEDGENGQEKNKHGSGGDDLIIEVPPGTVVYDKQTDEVMADMTAEGDKLIVAEGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA FKSST QAP ++ G G++K + L+LKL+AD+G++G PN GKST ++SV+ A Sbjct: 122 GGRGNARFKSSTRQAPKFSENGEPGEKKELKLELKLLADVGLVGFPNVGKSTLISSVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+I +Y FTT+ PNLG+VK G Y F++ADIPG+I+ AH G G+GD FL+H ERT V+L Sbjct: 182 KPEIGNYHFTTVEPNLGVVKTGDYSSFVMADIPGLIEGAHSGVGLGDDFLRHLERTKVIL 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQID-TVDSDTLARKKNELA 297 H+ VS E + + I +EL +N +L ++ +IV +++D T + + R K EL Sbjct: 242 HVLDVSGFEGRDPIEDFAVINEELEKFNPQLSQRPQIVAANKMDLTAAKENIDRVKEELE 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI 326 Q +V F S++TG G+ ++++ + DK+ Sbjct: 302 DQGYEV-FPISAVTGQGVDELIQAV-DKL 328 >gi|323344695|ref|ZP_08084919.1| Spo0B-associated GTP-binding protein [Prevotella oralis ATCC 33269] gi|323093965|gb|EFZ36542.1| Spo0B-associated GTP-binding protein [Prevotella oralis ATCC 33269] Length = 386 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 143/328 (43%), Positives = 211/328 (64%), Gaps = 5/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + R K+ GGPDGG GG GG V+++ N TL+ +Y+ Sbjct: 6 FVDYVKIYCRSGKGGRGSMHLRHVKYQPNGGPDGGDGGHGGSVYLRGNHNYWTLLHLKYR 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G + G G+DV + VP GT V+ + ICD+ +GQ ++L GG Sbjct: 66 RHVYAEHGGNGGRDKCHGTDGKDVYIDVPCGTVVYNAETGKYICDVTYDGQTVLLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F+S TNQAP YA PG +E + L+LKL+AD+G++G PNAGKST L++V+ A Sbjct: 126 GGLGNFQFRSPTNQAPRYAQPGEPMEELTVILELKLLADVGLVGFPNAGKSTLLSAVSSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+YPFTTL P+LGIV+ +K F++ADIPGII+ A G G+G RFL+H ER +LL Sbjct: 186 RPKIANYPFTTLEPSLGIVEYRDHKSFVMADIPGIIEGASAGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V ++++ Y+ +L+ELS +NSE+ K ++ +++ D +D + K+ L T Sbjct: 246 FMVPGDTDDIKKDYEVLLNELSQFNSEMLDKHRVLAITKCDLLDEELEDMLKSTLPT--- 302 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFS 328 VP F S++TG G+ + + L ++ S Sbjct: 303 DVPVVFISAVTGKGLGDLKDILWTELNS 330 >gi|27364126|ref|NP_759654.1| GTPase CgtA [Vibrio vulnificus CMCP6] gi|81844768|sp|Q8DEC6|OBG_VIBVU RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|27360244|gb|AAO09181.1| GTP-binding protein Obg/CgtA [Vibrio vulnificus CMCP6] Length = 389 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 146/331 (44%), Positives = 214/331 (64%), Gaps = 8/331 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +++GDGG G +SF REKF+ GGPDGG GG GGDV+IQA NLNTLID+R Sbjct: 1 MKFVDEAVIKVQAGDGGNGVVSFWREKFVTKGGPDGGDGGDGGDVYIQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ G+ G N +G +G+D+ L VPVGT+ + ++ ++ + G+++++A G Sbjct: 61 FQRFYEAERGQNGSGGNCTGKRGKDITLRVPVGTRAVDIHTNEIVAEVAEHGKKVMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTMGTKGEIRELRLELLLLADVGMLGLPNAGKSTFIRAVF 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + VQ A I+DEL Y+ +L K + +++D V + E Sbjct: 241 LLHMIDIFPIDQSDPVQNAL-TIIDELEQYSEKLANKPRWLVFNKVDLVSEEQADEIIQE 299 Query: 296 LATQCG--QVPFEFSSITGHGIPQILECLHD 324 + G + F+ S++ G ++ L D Sbjct: 300 VIDALGWEEQYFKISAVNRQGTKELCYKLAD 330 >gi|121730362|ref|ZP_01682718.1| GTP-binding protein, GTP1/Obg family [Vibrio cholerae V52] gi|147675124|ref|YP_001218705.1| GTPase ObgE [Vibrio cholerae O395] gi|153217225|ref|ZP_01950989.1| GTP-binding protein, GTP1/Obg family [Vibrio cholerae 1587] gi|153803662|ref|ZP_01958248.1| GTP-binding protein, GTP1/Obg family [Vibrio cholerae MZO-3] gi|153822599|ref|ZP_01975266.1| GTP-binding protein, GTP1/Obg family [Vibrio cholerae B33] gi|153827420|ref|ZP_01980087.1| GTP-binding protein, GTP1/Obg family [Vibrio cholerae MZO-2] gi|153830831|ref|ZP_01983498.1| GTP-binding protein, GTP1/Obg family [Vibrio cholerae 623-39] gi|227080648|ref|YP_002809199.1| GTP1/Obg family protein [Vibrio cholerae M66-2] gi|229507076|ref|ZP_04396582.1| GTP-binding protein Obg [Vibrio cholerae BX 330286] gi|229508769|ref|ZP_04398261.1| GTP-binding protein Obg [Vibrio cholerae B33] gi|229512633|ref|ZP_04402102.1| GTP-binding protein Obg [Vibrio cholerae TMA 21] gi|229519756|ref|ZP_04409199.1| GTP-binding protein Obg [Vibrio cholerae RC9] gi|229519993|ref|ZP_04409422.1| GTP-binding protein Obg [Vibrio cholerae TM 11079-80] gi|229530281|ref|ZP_04419669.1| GTP-binding protein Obg [Vibrio cholerae 12129(1)] gi|229606268|ref|YP_002876916.1| GTPase ObgE [Vibrio cholerae MJ-1236] gi|254292219|ref|ZP_04962986.1| GTP-binding protein, GTP1/Obg family [Vibrio cholerae AM-19226] gi|254850668|ref|ZP_05240018.1| GTP1/Obg family protein [Vibrio cholerae MO10] gi|297580577|ref|ZP_06942503.1| GTP1/Obg family protein [Vibrio cholerae RC385] gi|298501031|ref|ZP_07010832.1| obg family GTPase CgtA [Vibrio cholerae MAK 757] gi|9654861|gb|AAF93610.1| GTP1/Obg family protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121627882|gb|EAX60466.1| GTP-binding protein, GTP1/Obg family [Vibrio cholerae V52] gi|124113748|gb|EAY32568.1| GTP-binding protein, GTP1/Obg family [Vibrio cholerae 1587] gi|124120806|gb|EAY39549.1| GTP-binding protein, GTP1/Obg family [Vibrio cholerae MZO-3] gi|126519903|gb|EAZ77126.1| GTP-binding protein, GTP1/Obg family [Vibrio cholerae B33] gi|146317007|gb|ABQ21546.1| GTP-binding protein, GTP1/Obg family [Vibrio cholerae O395] gi|148873690|gb|EDL71825.1| GTP-binding protein, GTP1/Obg family [Vibrio cholerae 623-39] gi|149738663|gb|EDM53006.1| GTP-binding protein, GTP1/Obg family [Vibrio cholerae MZO-2] gi|150421876|gb|EDN13856.1| GTP-binding protein, GTP1/Obg family [Vibrio cholerae AM-19226] gi|227008536|gb|ACP04748.1| GTP1/Obg family protein [Vibrio cholerae M66-2] gi|227012291|gb|ACP08501.1| GTP1/Obg family protein [Vibrio cholerae O395] gi|229332054|gb|EEN97542.1| GTP-binding protein Obg [Vibrio cholerae 12129(1)] gi|229342942|gb|EEO07931.1| GTP-binding protein Obg [Vibrio cholerae TM 11079-80] gi|229344445|gb|EEO09420.1| GTP-binding protein Obg [Vibrio cholerae RC9] gi|229350310|gb|EEO15261.1| GTP-binding protein Obg [Vibrio cholerae TMA 21] gi|229354172|gb|EEO19103.1| GTP-binding protein Obg [Vibrio cholerae B33] gi|229355821|gb|EEO20741.1| GTP-binding protein Obg [Vibrio cholerae BX 330286] gi|229368923|gb|ACQ59346.1| GTP-binding protein Obg [Vibrio cholerae MJ-1236] gi|254846373|gb|EET24787.1| GTP1/Obg family protein [Vibrio cholerae MO10] gi|297534993|gb|EFH73828.1| GTP1/Obg family protein [Vibrio cholerae RC385] gi|297540279|gb|EFH76339.1| obg family GTPase CgtA [Vibrio cholerae MAK 757] Length = 395 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 136/291 (46%), Positives = 201/291 (69%), Gaps = 4/291 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +++GDGG G +SF REKF+ GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 6 MKFVDEAVIKVQAGDGGNGVVSFWREKFVTNGGPDGGDGGDGGDVYMVADENLNTLIDYR 65 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ G+ G N +G G+D L VPVGT+ + +I ++ + G+++++A G Sbjct: 66 FQRFYEAERGKNGGGGNCTGKSGKDKELRVPVGTRAVDIHTNEIIGEVAEHGKKVMIAKG 125 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSS N++P G G+ + I L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 126 GWHGLGNARFKSSVNRSPRQKTLGTKGELRDIRLELLLLADVGMLGMPNAGKSTFIRAVS 185 Query: 181 RAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 186 AAKPKVADYPFTTLVPSLGVVSVLPEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 245 Query: 240 LLHIVSAL-EENVQAAYQC--ILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH++ + + A+ I+DEL Y+ +L KK + +++D + + Sbjct: 246 LLHMIDIMPADQSDPAHNALTIIDELEQYSEKLAKKPRWLVFNKVDLMSEE 296 >gi|323495814|ref|ZP_08100882.1| GTPase CgtA [Vibrio sinaloensis DSM 21326] gi|323319030|gb|EGA71973.1| GTPase CgtA [Vibrio sinaloensis DSM 21326] Length = 389 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 140/287 (48%), Positives = 200/287 (69%), Gaps = 6/287 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA V +++GDGG G +SF REKF+ GGPDGG GG GGDV+IQA NLNTLID+R Sbjct: 1 MKFVDEAVVKVQAGDGGNGVVSFWREKFVAKGGPDGGDGGDGGDVYIQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ GE G N +G +G+D VL VPVGT+ + ++ ++ + G+++++A G Sbjct: 61 FQRFYEAERGENGRGGNCTGKRGKDKVLRVPVGTRAVDIHTNEIVAEVAEHGKKVMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTLGTKGEIREVRLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 LLH++ + + V+ A I+DEL Y+ +L K + +++D Sbjct: 241 LLHMIDIMPIDQSDPVENAL-TIIDELEQYSEKLADKPRWLIFNKVD 286 >gi|288925671|ref|ZP_06419603.1| Obg family GTPase CgtA [Prevotella buccae D17] gi|315606461|ref|ZP_07881476.1| obg family GTPase CgtA [Prevotella buccae ATCC 33574] gi|288337609|gb|EFC75963.1| Obg family GTPase CgtA [Prevotella buccae D17] gi|315251867|gb|EFU31841.1| obg family GTPase CgtA [Prevotella buccae ATCC 33574] Length = 388 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 138/322 (42%), Positives = 207/322 (64%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + R K+ GGPDGG GG+GG V ++ N TL+ +YQ Sbjct: 5 FVDYVKIYCRSGKGGKGSMHLRHVKYNPNGGPDGGDGGKGGSVILRGNHNYWTLLHLKYQ 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G + G G+D+ + VP GT V+ + +CD+ +GQ ++L GG Sbjct: 65 RHVYAEHGGNGGRDKCHGTDGKDMYIDVPCGTVVYNAETGKYVCDVTYDGQEVMLLKGGR 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F++STNQAP YA PG QE + L+LKL+AD+G++G PNAGKST L++++ A Sbjct: 125 GGLGNFQFRTSTNQAPRYAQPGEPMQEMTVILELKLLADVGLVGFPNAGKSTLLSALSSA 184 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+YPFTTL P+LGIV K F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 185 RPKIANYPFTTLEPSLGIVSYHDQKSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 244 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L T Sbjct: 245 FMVPGDTDDIKREYEVLLNELRQFNPEMLDKHRVLAVTKCDLLDEELIEMLRETLPT--- 301 Query: 302 QVPFEF-SSITGHGIPQILECL 322 +P F SS+TG G+ ++ + L Sbjct: 302 DLPVVFISSVTGLGLSELKDVL 323 >gi|268319615|ref|YP_003293271.1| GTP-binding protein CgtA [Lactobacillus johnsonii FI9785] gi|262397990|emb|CAX67004.1| GTP-binding protein CgtA [Lactobacillus johnsonii FI9785] Length = 428 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 139/323 (43%), Positives = 212/323 (65%), Gaps = 10/323 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EK++ GGP GG GGRGG + + A S L TL+DFR++ Sbjct: 2 FVDQTKIDVQAGKGGDGAVAFRHEKYVPLGGPAGGDGGRGGSIILVADSGLRTLMDFRFR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA +GE G +++ G +DV L VP+GT V++ + L+ DL + GQ +++A GG Sbjct: 62 RKFKADNGENGRIKSQYGRGAKDVRLKVPMGTSVYDFNTGELLGDLVENGQELVVAHGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + T AP A G G+ + + L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 122 GGRGNIHFATPTRTAPEIAENGEPGEFRTLRLELKVLADVGLVGFPSVGKSTLLSVVTKA 181 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+I+ A +G G+G +FL+H ERT V+ Sbjct: 182 KPKIAAYEFTTLTPNLGMVVLPDG-RDFSMADLPGLIEGASKGVGLGIQFLRHVERTKVI 240 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH+VS N + A Y+ I EL+AY +L K EI+ +Q+D S+ K E Sbjct: 241 LHLVSMDPNNGRDAYEDYETIRKELAAYTKDLTTKKEIIVATQMDIPGSE---EKFAEFK 297 Query: 298 TQCG-QVPFEFSSITGHGIPQIL 319 + G + + SS+T G+ +++ Sbjct: 298 KKLGDKTVYPISSVTHKGVSELM 320 >gi|116629527|ref|YP_814699.1| GTPase ObgE [Lactobacillus gasseri ATCC 33323] gi|311110831|ref|ZP_07712228.1| Obg family GTPase CgtA [Lactobacillus gasseri MV-22] gi|122273535|sp|Q043W1|OBG_LACGA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|116095109|gb|ABJ60261.1| Predicted GTPase [Lactobacillus gasseri ATCC 33323] gi|311065985|gb|EFQ46325.1| Obg family GTPase CgtA [Lactobacillus gasseri MV-22] Length = 428 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 138/323 (42%), Positives = 212/323 (65%), Gaps = 10/323 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EK++ GGP GG GGRGG + + A S L TL+DFR++ Sbjct: 2 FVDQTKIDVQAGKGGDGAVAFRHEKYVPLGGPAGGDGGRGGSIILVADSGLRTLMDFRFR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA +GE G +++ G +DV L VP+GT V++ + L+ DL + GQ +++A GG Sbjct: 62 RKFKADNGENGRIKSQYGRGAKDVRLKVPMGTSVYDFNTGELLGDLVKNGQELVVARGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + T AP A G G+ + + L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 122 GGIGNIHFATPTRTAPEIAENGEPGEFRTLRLELKVLADVGLVGFPSVGKSTLLSVVTKA 181 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+I+ A +G G+G +FL+H ERT V+ Sbjct: 182 KPKIAAYEFTTLTPNLGMVVLPDG-RDFSMADLPGLIEGASKGVGLGIQFLRHVERTKVI 240 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 LH+VS N + A Y+ I EL+ Y +L K E++ +Q+D S + LA K +L Sbjct: 241 LHLVSMDPNNGRDAYEDYETIRKELAGYTKDLTSKKELIVATQMDIPGSEEKLAEFKKKL 300 Query: 297 ATQCGQVPFEFSSITGHGIPQIL 319 + + SS+T G+ +++ Sbjct: 301 GDKT---VYPISSVTHQGVSELM 320 >gi|282848908|ref|ZP_06258298.1| Obg family GTPase CgtA [Veillonella parvula ATCC 17745] gi|294791761|ref|ZP_06756909.1| Obg family GTPase CgtA [Veillonella sp. 6_1_27] gi|294793622|ref|ZP_06758759.1| Obg family GTPase CgtA [Veillonella sp. 3_1_44] gi|282581413|gb|EFB86806.1| Obg family GTPase CgtA [Veillonella parvula ATCC 17745] gi|294455192|gb|EFG23564.1| Obg family GTPase CgtA [Veillonella sp. 3_1_44] gi|294456991|gb|EFG25353.1| Obg family GTPase CgtA [Veillonella sp. 6_1_27] Length = 423 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 135/322 (41%), Positives = 213/322 (66%), Gaps = 4/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A+V++++GDGG G SFRREK++ GGP GG GG+G DV +A N+NTL+DFRY+ Sbjct: 2 FIDRARVFVKAGDGGDGMSSFRREKYVPNGGPSGGDGGKGADVVFKADKNINTLVDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA G G N+ G + +++ VP+GT + +E+ + CDL +G ++A GG Sbjct: 62 RQFKAPAGGNGESSNKHGRGSDPLIIPVPLGTVIKDEETGKIFCDLVNDGDTFVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F++S N+AP +A G G+E + L+LK++AD+G++G P+ GKS+ L V++A Sbjct: 122 GGRGNARFQTSANRAPTFAEKGEPGEEFWLQLELKVLADVGLLGYPSVGKSSILRKVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P++A Y FTTL P LG+V G + F+LADIPG+I+ A +G G+G FL+H ERT++L+ Sbjct: 182 QPEVAAYHFTTLTPVLGVVTISGDRSFVLADIPGLIEGASEGVGLGHNFLRHVERTNILI 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+ VS +E + + + I +EL Y+ +L K +IV L++ID V DT + + Sbjct: 242 HVLDVSGMEGRDPKVDFDAINEELRKYSEKLANKKQIVALNKIDMVFDDTTIPETKKYFE 301 Query: 299 QCGQVPFEFSSITGHGIPQILE 320 G F ++++G G+ +++E Sbjct: 302 DKGYEVFLINALSGEGLSELME 323 >gi|328949801|ref|YP_004367136.1| GTPase obg [Marinithermus hydrothermalis DSM 14884] gi|328450125|gb|AEB11026.1| GTPase obg [Marinithermus hydrothermalis DSM 14884] Length = 415 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 141/327 (43%), Positives = 221/327 (67%), Gaps = 7/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D ++ + +G GG G +SF REKFI GGPDGG+GGRGG V+++A ++++L + Sbjct: 2 FRDTIEITVAAGRGGDGVVSFFREKFIPKGGPDGGNGGRGGSVYLRAGHDVDSLSKL-SR 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H++A+ GE G + G G+D+++ VP+GT+V++ + +L+ DL +EGQ + +A GG Sbjct: 61 HHYRAEDGEHGKGKGMDGRSGKDLIIEVPLGTRVYDAETGALLADLVEEGQTVRVARGGE 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F + T QAP +A G+ G+ + + L+L+LIAD+G++G PNAGKS+ L ++TRA Sbjct: 121 GGLGNAAFATPTRQAPRFALAGLPGETRRLRLELRLIADVGLVGYPNAGKSSLLRALTRA 180 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PK+A YPFTTL P+LG+V+ G + F +ADIPGII+ AH+G G+G FL+H RT VLL+ Sbjct: 181 RPKVASYPFTTLTPHLGVVERGLERFTMADIPGIIEGAHEGKGLGLEFLRHISRTRVLLY 240 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQ 302 +++A E+ VQ A + + +E+ AY+ +L K+ +V L++ID ++ +ELA + Sbjct: 241 VLAADEDPVQ-ALRTLREEVRAYDPDLAKRPSLVALNKIDLLEVGEAELWVDELAREGLP 299 Query: 303 VPFEFSSITGHGIPQILECLHDKIFSI 329 V S+ G G LE L + +FS+ Sbjct: 300 V-LAISATRGDG----LEALVETLFSL 321 >gi|261749490|ref|YP_003257176.1| GTPase ObgE [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497583|gb|ACX84033.1| GTPase ObgE [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 332 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 136/331 (41%), Positives = 205/331 (61%), Gaps = 6/331 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y +SGDGG G I F REK G DGG GG+GGD+ ++ SN++T I +Y Sbjct: 5 FIDLIKIYCKSGDGGKGAIHFHREKSRRKGVSDGGDGGKGGDIIMRGNSNIHTFIHLKYN 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+ A G G K+N +GA G+++ + VP+GT + ++ +++ ++ + Q +L GG Sbjct: 65 RHWIANSGFPGKKKNLTGANGKNLFIEVPIGT-IVKDLNQNVLSEITRNFQEEVLFQGGI 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA FKSS ++PYYA G+ + I L+LK++AD+GIIG PN GKST L+ +T+A Sbjct: 124 GGKGNAFFKSSKRRSPYYAQSGVKTKGNWIILELKILADVGIIGFPNTGKSTLLSKITKA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKI ++ FTT PN GIVK Y FI+ DIPGII+ A +G G+G FL+H ER +LL Sbjct: 184 RPKIGNFCFTTTIPNFGIVKMNYDSFIVVDIPGIIEKASEGKGLGYNFLRHVERNFILLF 243 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQ 302 ++SA EN + Y +L+EL +N +L K ++ +S+ D +D+ K + Sbjct: 244 LISANTENQKMEYLTLLNELKKFNPKLLNKKRLLAVSKSDLIDNRKKEEIKKNFLLEKEN 303 Query: 303 VPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 + F SS T G+ Q L +++S+ EN Sbjct: 304 IIF-ISSFTRDGLFQ----LKTELWSLVREN 329 >gi|238855216|ref|ZP_04645535.1| Obg family GTPase CgtA [Lactobacillus jensenii 269-3] gi|260664579|ref|ZP_05865431.1| obg family GTPase [Lactobacillus jensenii SJ-7A-US] gi|282932490|ref|ZP_06337915.1| Obg family GTPase CgtA [Lactobacillus jensenii 208-1] gi|313471956|ref|ZP_07812448.1| Obg family GTPase CgtA [Lactobacillus jensenii 1153] gi|238832108|gb|EEQ24426.1| Obg family GTPase CgtA [Lactobacillus jensenii 269-3] gi|239529113|gb|EEQ68114.1| Obg family GTPase CgtA [Lactobacillus jensenii 1153] gi|260561644|gb|EEX27616.1| obg family GTPase [Lactobacillus jensenii SJ-7A-US] gi|281303439|gb|EFA95616.1| Obg family GTPase CgtA [Lactobacillus jensenii 208-1] Length = 432 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 143/333 (42%), Positives = 212/333 (63%), Gaps = 6/333 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EK++ GGP GG GGRGG + A S L TL+DFRY+ Sbjct: 4 FVDQTKIEVQAGKGGDGMVAFRHEKYVPNGGPAGGDGGRGGSIIFVADSGLRTLMDFRYR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA +GE G +++ G +D+ L VPVGT V + +I D+ ++GQ +++A GG Sbjct: 64 RKFKADNGENGRIKSQYGRGAKDLYLKVPVGTVVSDFFTGEVIGDMTKKGQELVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +S N AP A G G+ + + L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 124 GGRGNIHFATSVNTAPEIAENGEPGEFRTLKLELKVLADVGLVGFPSVGKSTLLSVVTKA 183 Query: 183 KPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG +V ++F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIAAYEFTTLTPNLGMVVLNDGRDFSMADLPGLIEGASQGVGLGIQFLRHVERTKVIL 243 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT--LARKKNEL 296 H+VS N + A Y+ I ELS Y ++L KK EI+ SQ+D S+ K+ Sbjct: 244 HLVSMDPNNGRDAVEDYKIIRKELSNYTADLTKKREIIVASQMDIPGSEEKFTEFKQGLE 303 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 Q + F+ SS+T G+ ++ D + + Sbjct: 304 DLQVDEPIFKISSVTHQGLEPLMNKAADLVAEV 336 >gi|259503098|ref|ZP_05746000.1| Spo0B-associated GTP-binding protein [Lactobacillus antri DSM 16041] gi|259168964|gb|EEW53459.1| Spo0B-associated GTP-binding protein [Lactobacillus antri DSM 16041] Length = 440 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 141/328 (42%), Positives = 211/328 (64%), Gaps = 9/328 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +G GG G ++FRREK++ GGP GG GGRGG + ++ L TL+DFRY Sbjct: 4 FVDQIKIEAHAGKGGDGMVAFRREKYVPNGGPAGGDGGRGGSIILKVDEGLRTLMDFRYH 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++G GM + +G D V+ VP GT V + D ++I DL + GQ +++A GG Sbjct: 64 RIFKAKNGGNGMNKQMTGPSAPDTVIAVPQGTTVRDLDTGAIIGDLVENGQELVVAQGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S+ N AP A G G ++ + L+LK++AD+G+IG P+ GKST L+ VT A Sbjct: 124 GGRGNIHFASAKNPAPEIAENGEPGADRYLELELKMLADVGLIGFPSVGKSTLLSVVTGA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V ++F +AD+PG+I+ A +G G+G +FL+H ERT VLL Sbjct: 184 KPKIAAYEFTTLVPNLGMVMLPDGRDFAMADMPGLIEGASKGIGLGLKFLRHIERTRVLL 243 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKKNELA 297 H+V E+ A Y+ I EL+ Y+ EL K+ +I+ +++D +++ LA K +LA Sbjct: 244 HLVDMSSEDENQAIERYRQINQELANYDPELLKRPQIIVATKMDLPNAEKNLAAFKKQLA 303 Query: 298 --TQCGQVP--FEFSSITGHGIPQILEC 321 + + P F S++T G+ Q+++ Sbjct: 304 ADSSLAEQPTIFPISAVTHQGVQQLMQL 331 >gi|303245650|ref|ZP_07331933.1| GTP-binding protein Obg/CgtA [Desulfovibrio fructosovorans JJ] gi|302492913|gb|EFL52778.1| GTP-binding protein Obg/CgtA [Desulfovibrio fructosovorans JJ] Length = 394 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 154/378 (40%), Positives = 221/378 (58%), Gaps = 57/378 (15%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + +RSG GG G +SFRREKFI GGPDGG GG+GGD+ +A +L TL D R Sbjct: 1 MRFVDEAWIIVRSGKGGRGSVSFRREKFIPRGGPDGGDGGKGGDIVFRADPDLLTLYDLR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTV----------------------------PV 92 ++ ++A++GE GM R ++G E++V+ V P Sbjct: 61 LRRIYEARNGEGGMGRQKNGKAAENLVIDVPVGTELYELPPLEPAEAAPEDQEVPESPPS 120 Query: 93 GTQVFE---------ED---------------GISLICDLDQEGQRIILAPGGNGGFGNA 128 V+E ED L+ DL + GQ + GG GG GN Sbjct: 121 FKPVYEIGKDEADAGEDEAPVEVENEDEDEVPEEPLLVDLTEPGQTFVACRGGRGGKGNL 180 Query: 129 HFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIAD 188 HF S+T + P +A PG G+E+ I L LK++AD+GIIGLPNAGKSTF+ +V+RA+PKIA Sbjct: 181 HFASATMRTPRFAQPGEPGEERRIRLVLKVLADVGIIGLPNAGKSTFIGAVSRARPKIAA 240 Query: 189 YPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 YPFTTL PNLG+V+ Y +LADIPG+I+ AH G G+G RFL+H ERT VLLH+VSA Sbjct: 241 YPFTTLTPNLGVVENDYGDRLVLADIPGLIEGAHLGHGLGHRFLRHVERTRVLLHVVSAE 300 Query: 248 E---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP 304 + E + A+ + +EL ++ L ++ +I +++ID + + LA ++ +V Sbjct: 301 DASPEGIFEAFDVVDEELRRFDPALAERPQIRVVNKIDLLPPEDLAARREAAEAAGQKVL 360 Query: 305 FEFSSITGHGIPQILECL 322 F S++TG G+ +LE + Sbjct: 361 F-MSALTGEGVEAVLEAI 377 >gi|330961582|gb|EGH61842.1| GTPase CgtA [Pseudomonas syringae pv. maculicola str. ES4326] Length = 379 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 124/281 (44%), Positives = 183/281 (65%), Gaps = 8/281 (2%) Query: 45 VWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISL 104 V++ A NLNTL+D+RY +HF A+ G G + +G KGE++VL VPVGT + + + Sbjct: 17 VFMVADVNLNTLVDYRYTRHFDAERGSNGGSADCTGRKGEELVLRVPVGTTIIDATTQEI 76 Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 I DL ++GQR+++A GG G GN FKSSTN+AP PG G ++ + L+LK++AD+G+ Sbjct: 77 IGDLTKDGQRLMVAQGGWHGLGNTRFKSSTNRAPRQTTPGKPGDQRDLKLELKVLADVGL 136 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQG 223 +GLPNAGKSTF+ SV+ AKPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A G Sbjct: 137 LGLPNAGKSTFIRSVSAAKPKVADYPFTTLVPNLGVVSVDRWKSFVVADIPGLIEGASDG 196 Query: 224 AGIGDRFLKHTERTHVLLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 AG+G RFLKH RT +LLH+V E + A + I+ EL ++ L ++ + L++ Sbjct: 197 AGLGIRFLKHLARTRLLLHLVDMAPLDETSAPDAAEVIVRELEKFSPSLAERDRWLVLNK 256 Query: 281 IDTVDSDTLARKKNELATQ---CGQVPFEFSSITGHGIPQI 318 D + + +K E+ + G V + S+I G Q+ Sbjct: 257 CDQILEEEQEARKQEIVDRLEWTGPV-YVISAIAKEGTEQL 296 >gi|121534075|ref|ZP_01665900.1| GTP1/OBG sub domain protein [Thermosinus carboxydivorans Nor1] gi|121307178|gb|EAX48095.1| GTP1/OBG sub domain protein [Thermosinus carboxydivorans Nor1] Length = 423 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 142/336 (42%), Positives = 217/336 (64%), Gaps = 4/336 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A++++++GDGG G SFRREK++ GGP+GG GGRG DV++ +LNTL+DFRY+ Sbjct: 2 FIDRARIFVKAGDGGNGMSSFRREKYVPKGGPNGGDGGRGADVYLIVDDSLNTLLDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F+ ++G G N+ G ED+ + VP GT V +E +I DL GQ++++A GG Sbjct: 62 RKFQGENGGAGGSSNKHGRDAEDLFIKVPPGTIVRDEATGEVIADLTANGQQVLVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F SS N+AP +A G G+ + + L+LK++AD+G++G P+ GKS+ LA V+ A Sbjct: 122 GGRGNARFVSSVNRAPTFAEKGEPGESRWLILELKVLADVGLVGYPSVGKSSILARVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA Y FTTL P LG+V G + F+LADIPG+I+ AH G G+G FL+H ERT VL+ Sbjct: 182 KPEIAAYHFTTLTPVLGVVSVGDGRSFVLADIPGLIEGAHAGVGLGHDFLRHIERTKVLI 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+ VS LE + Y I +EL YN +L ++ +I+ +++D ++ ++ E Sbjct: 242 HVLDVSGLEGRDPIDDYHKINEELRLYNEKLARRPQIIAANKMDLPEAQANYKRVAEYMA 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + G+ + S+ TG G+P +++ + R E E Sbjct: 302 REGREIYPISAATGDGLPLLMQRAAQLLAEYREEPE 337 >gi|15613776|ref|NP_242079.1| GTPase ObgE [Bacillus halodurans C-125] gi|81857859|sp|Q9KDK0|OBG_BACHD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|10173829|dbj|BAB04932.1| GTP-binding protein involved in initiation of sporulation [Bacillus halodurans C-125] Length = 427 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 146/342 (42%), Positives = 215/342 (62%), Gaps = 12/342 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KVY++ GDGG G ++FRREK++ GGP GG GG+GG V + L TL+DFRYQ Sbjct: 2 FVDKVKVYVKGGDGGNGMVAFRREKYVPDGGPAGGDGGKGGSVIFKVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE G +N+ G ED ++ VP GT V +E ++ DL GQ I+A GG Sbjct: 62 RHFKADRGEHGRPKNQHGKNAEDKIVRVPPGTTVIDEQTGQVLADLTHHGQEAIIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G G E+ + L+LK++AD G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNTRFATPANPAPELSENGEPGVERDVILELKVLADAGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTT+ PNLG+V+ + + F+LAD+PG+I+ AH+G G+G +FL+H ERT V++ Sbjct: 182 KPKIAEYHFTTITPNLGVVRVDDGRSFVLADLPGLIEGAHEGIGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 H++ SALE + Y I +EL AYN L ++ +++ +++D + ++ L R K +L Sbjct: 242 HVIDMSALEGRDPYDDYVSINEELKAYNLRLMERPQLIVANKMDMPNAAENLERFKEKLT 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI-----FSIRGENE 334 P S++T G+ +L + D I F I E E Sbjct: 302 DDHPIFP--ISALTRDGLQPLLRAIMDTIETTPEFPIYEETE 341 >gi|225432348|ref|XP_002276482.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 636 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 143/338 (42%), Positives = 214/338 (63%), Gaps = 6/338 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+ D AK+Y+++GDGG G ++FRREK++ FGGP GG GGRGG+V+++ ++N+L+ FR Sbjct: 174 MRCFDRAKIYVKAGDGGNGVVAFRREKYVPFGGPSGGDGGRGGNVYVEVDGSMNSLLPFR 233 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE--EDGIS--LICDLDQEGQRII 116 HF+A G G RN++GAKGEDVV+ V GT + E DG+ ++ +L GQR + Sbjct: 234 NGVHFRAGRGSHGQGRNQNGAKGEDVVVKVAPGTVIREAGSDGVEGEVLLELLHPGQRAM 293 Query: 117 LAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFL 176 L PGG GG GNA FKS TN+ P A G G E + L+LKL+AD+GI+G PNAGKST L Sbjct: 294 LLPGGRGGRGNASFKSGTNKVPKIAENGEEGPEMWLELELKLVADVGIVGAPNAGKSTLL 353 Query: 177 ASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTE 235 + ++ A+P IA+YPFTTL PNLG+V GY ++AD+PG+++ AH+G G+G FL+HTE Sbjct: 354 SVISAAQPTIANYPFTTLLPNLGVVSFGYDATMVVADLPGLLEGAHKGFGLGHEFLRHTE 413 Query: 236 RTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 R L+H+V + + + + EL ++ EL +K +V +++D ++ E Sbjct: 414 RCSSLVHVVDGSSQQPEYEFDAVRLELELFSPELAEKPYVVAYNKMDLPEAYERWPSFKE 473 Query: 296 LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 G F S++ G G +++ C ++ R E+ Sbjct: 474 RLQARGIGTFCMSAVKGEGTHEVV-CAAYELLRNRTES 510 >gi|40063212|gb|AAR38049.1| GTP1/OBG family protein [uncultured marine bacterium 562] Length = 340 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 144/332 (43%), Positives = 212/332 (63%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DEA + +R+G+GGAG SFRREK+I FGGPDGG GG+G DV + N NTLIDF+ Sbjct: 1 MNFIDEAFLEVRAGNGGAGASSFRREKYIPFGGPDGGDGGKGADVVFRVNLNKNTLIDFQ 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ F A++G G +N++G+ ED+V+ +P GT ++++ + D + +LA G Sbjct: 61 NKRVFIAKNGRPGSGKNKTGSAAEDLVIDIPKGTVIYDDISGDELLDCCDDDIEYVLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNA FKSSTNQAP G G+ + I L+LK +AD+G++G PNAGKSTFL V+ Sbjct: 121 GDGGQGNARFKSSTNQAPRKFTLGFEGEVRFIRLELKSLADVGLVGFPNAGKSTFLNKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKI YPFTTL P+LG ++ F++ADIPG+I+ A +GAG+G +FL+H RT +L Sbjct: 181 SAKPKIGSYPFTTLRPHLGTIEGSDSSFVIADIPGLIEGASEGAGLGIKFLQHISRTGLL 240 Query: 241 LHIVSALE-ENVQAAYQCIL--DELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 L V +N+ Q L +ELSAY +L +K+ + ++ID ++ D L + + Sbjct: 241 LIFVDLYSTDNLDPIEQIKLLKNELSAYKDDLTQKVSWIVCNKIDLINKDDLEIHSSHIQ 300 Query: 298 TQCG---QVPFEFSSITGHGIPQILECLHDKI 326 + + F S+ TG G ++L+ L + I Sbjct: 301 EELDIAEEDIFFISAATGEGTQKLLQSLEEVI 332 >gi|319440893|ref|ZP_07990049.1| GTPase CgtA [Corynebacterium variabile DSM 44702] Length = 507 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 141/339 (41%), Positives = 211/339 (62%), Gaps = 15/339 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++++GDGG G S REKFI GGPDGG+GG GGD+ ++ ++TL+DF + Sbjct: 4 RFVDRVVLHLQAGDGGNGCSSVYREKFIPLGGPDGGNGGHGGDIILEVDPQVHTLLDFHF 63 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H KA G G +R+GA+GED++L VP GT + ++ G +I D+ +GQR+I+A GG Sbjct: 64 HPHLKAGRGTNGAGDHRNGARGEDLILQVPAGTVILDDKG-EVIADMVAKGQRVIVAAGG 122 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 +GG GNA S +AP +A G G+ K I ++LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 123 HGGLGNAALVSRARKAPGFALLGEPGEIKDITIELKSMADVGLVGFPSAGKSSLVSVLSA 182 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G++ F +AD+PG+I A QG G+G FL+H ERT VL Sbjct: 183 AKPKIADYPFTTLQPNLGVVNVGHRVFTIADVPGLIPGASQGKGLGLDFLRHIERTAVLA 242 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSE---------LRKKIEIVGLSQIDTVDSDT 288 HIV E N + + EL+ Y SE LR + ++ L+++D D+ Sbjct: 243 HIVDCASLESERNPVDDIRALESELANYQSELSEDAGLGDLRDRPRVIVLNKMDIPDARE 302 Query: 289 LAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +A + EL + G FE S++ G+ + L D + Sbjct: 303 MAEIIRPELEEEFGWPVFEISTVAHQGLEPLKFALMDIV 341 >gi|325681526|ref|ZP_08161051.1| Obg family GTPase CgtA [Ruminococcus albus 8] gi|324106793|gb|EGC01084.1| Obg family GTPase CgtA [Ruminococcus albus 8] Length = 425 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 135/328 (41%), Positives = 215/328 (65%), Gaps = 6/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK+YI++GDGG G +SF REK++ GGPDGG GG+GGDV + N++ LIDFRY+ Sbjct: 2 FVDQAKIYIKAGDGGDGAVSFHREKYVAAGGPDGGDGGKGGDVIFKVDDNISNLIDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ G+ G +N G +D+V+ VP GT + + D ++ D+ + + +++A GG Sbjct: 62 KKYVAEKGQNGGAKNSYGRSADDLVIKVPRGTVIKDADTGRILADMSAD-EPVVVAHGGK 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHF +ST Q P +A PG G+E + L+LKL+AD+G++G PN GKST ++ V+ A Sbjct: 121 GGRGNAHFATSTRQIPRFAKPGFRGEEFNVQLELKLLADVGLVGFPNVGKSTLISVVSAA 180 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL P LG+VK G + F++ADIPG+I+ A +G G+G FL+H ER +++ Sbjct: 181 KPKIANYHFTTLTPVLGVVKVGEERSFVMADIPGLIEGASEGVGLGHEFLRHVERCRLIV 240 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+ VS +E + ++ I EL+ ++ EL + +IV ++ D +D ++ E Sbjct: 241 HVVDVSGIEGRDPIEDFEAINKELANFSEELAEAPQIVAANKSDMA-TDEQKQRFKEYID 299 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKI 326 G +E S+ T G +++ +++K+ Sbjct: 300 DLGLPCYEISAATTQGTQELIYGVNEKL 327 >gi|227499557|ref|ZP_03929664.1| possible spo0B-associated GTP-binding protein [Anaerococcus tetradius ATCC 35098] gi|227218316|gb|EEI83570.1| possible spo0B-associated GTP-binding protein [Anaerococcus tetradius ATCC 35098] Length = 426 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 142/326 (43%), Positives = 218/326 (66%), Gaps = 6/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 +D A+V +++GDGG G +++RREK+ GGP GG GG GG + I+AT NL+TL +FRY+ Sbjct: 1 MIDYARVSLKAGDGGNGAVAWRREKYEPNGGPAGGDGGDGGSIIIKATRNLSTLDEFRYK 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +KAQ+GE G K + G KGED+++ VPVGT V E + +I DL+++G+ I+A GG Sbjct: 61 TKYKAQNGEAGGKSKKFGKKGEDLIIKVPVGTLVREAESKVIIKDLNEDGEEFIIAKGGR 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+S QAP +A G GQE + +LK++AD+G++GLPN GKST ++ +++A Sbjct: 121 GGRGNVHFKNSIRQAPRFAEKGRAGQEIELIFELKILADVGLVGLPNVGKSTLISVISKA 180 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTT+ PNLG+V + + FI+ADIPG+I+ A++G G+G FLKH ER VL+ Sbjct: 181 KPKIANYHFTTIDPNLGVVNIDSERSFIVADIPGLIEGANEGNGLGHDFLKHIERCRVLV 240 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V S +E N + I +EL YN +L +K ++ L++ D +D + E + Sbjct: 241 HLVDISGIEGRNPIDDFNMINEELKLYNEKLAEKPMLIALNKSDLDFNDNASSFIKEFSD 300 Query: 299 QCGQVPFEFSSITGHGIPQILECLHD 324 + ++ S+ T GI ++++ + + Sbjct: 301 KYD--IYKISAATTTGIKELIDAVSE 324 >gi|153941466|ref|YP_001392262.1| GTPase ObgE [Clostridium botulinum F str. Langeland] gi|168179476|ref|ZP_02614140.1| Spo0B-associated GTP-binding protein [Clostridium botulinum NCTC 2916] gi|226950410|ref|YP_002805501.1| Spo0B-associated GTP-binding protein [Clostridium botulinum A2 str. Kyoto] gi|261266739|sp|A7GHK2|OBG_CLOBL RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|152937362|gb|ABS42860.1| Spo0B-associated GTP-binding protein [Clostridium botulinum F str. Langeland] gi|182669527|gb|EDT81503.1| Spo0B-associated GTP-binding protein [Clostridium botulinum NCTC 2916] gi|226841356|gb|ACO84022.1| Spo0B-associated GTP-binding protein [Clostridium botulinum A2 str. Kyoto] gi|295320256|gb|ADG00634.1| Spo0B-associated GTP-binding protein [Clostridium botulinum F str. 230613] Length = 424 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 136/323 (42%), Positives = 204/323 (63%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK++++SG GG G ISFRREK+I FGGPDGG GG+GG+V + N+ TL+DF Y+ Sbjct: 2 FIDTAKIFVKSGKGGDGSISFRREKYIAFGGPDGGDGGKGGNVVLVVDPNMTTLLDFTYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA+ G G G G+D+ + VP+GT V + + ++ DL + ++A GG Sbjct: 62 RKYKAEPGGNGAGSKCFGKNGKDLHIKVPMGTIVKDAETDKIMADLSKPEDSYVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + T QAP +A PG+ +E+ I L+LKL+AD+G+IG PN GKST L+ V++A Sbjct: 122 GGKGNCRFTTPTRQAPDFAEPGMPEEERWIKLELKLLADVGLIGFPNVGKSTLLSVVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V EG F++ADIPGII+ A +G G+G FL+H ERT VL+ Sbjct: 182 RPKIANYHFTTLKPNLGVVSIEGVNNFVIADIPGIIEGASEGVGLGLDFLRHVERTRVLI 241 Query: 242 HIVSALEENVQAAYQCIL---DELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H++ + Y L DEL Y+ +L + +I+ ++ D + D + K ++ Sbjct: 242 HVIDISSVEGRDPYDDFLKINDELKRYSVKLYDRPQIIAANKSDMLFDEEKFEEFKTKVE 301 Query: 298 TQCGQVPFEFSSITGHGIPQILE 320 F+ S+ T G+ +++ Sbjct: 302 KHGYNKVFKISAATKQGVDDLMK 324 >gi|308070389|ref|YP_003871994.1| Spo0B-associated GTP-binding protein [Paenibacillus polymyxa E681] gi|305859668|gb|ADM71456.1| Spo0B-associated GTP-binding protein [Paenibacillus polymyxa E681] Length = 436 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 136/323 (42%), Positives = 214/323 (66%), Gaps = 6/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK++++ GDGG G I+FRREK++ GGP GG GG GGDV + L TL+DFRYQ Sbjct: 2 FVDKAKIFVKGGDGGDGLIAFRREKYVPEGGPGGGDGGNGGDVIFRVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ G KG +++ GA E +++ +P GT + ++D ++ D+ + GQ++++A GG Sbjct: 62 RHFKAQRGVKGRNKSQHGANAEHMIVRIPPGTVIIDDDTGEVVADMTRHGQQVVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPNNPAPELAENGAEGQERYITLELKVMADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V G ++ F++AD+PG+I+ AH+G G+G FL+H ERT +++ Sbjct: 182 KPKIGAYHFTTITPNLGVVDVGDHRNFVMADLPGLIEGAHEGIGLGHEFLRHIERTRIII 241 Query: 242 HIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H+V + ++ I DEL YN+ L ++ +IV +++D ++ + LA K ++A Sbjct: 242 HVVDMAGSEGRDPFEDWTKINDELKQYNAALAERPQIVAANKMDMPEAEENLAHFKEQIA 301 Query: 298 TQCGQVP-FEFSSITGHGIPQIL 319 + + SS+T G+ ++L Sbjct: 302 SIRPDLEIMPISSLTRQGVKELL 324 >gi|282879323|ref|ZP_06288067.1| Obg family GTPase CgtA [Prevotella buccalis ATCC 35310] gi|281298520|gb|EFA90945.1| Obg family GTPase CgtA [Prevotella buccalis ATCC 35310] Length = 390 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 139/328 (42%), Positives = 213/328 (64%), Gaps = 5/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ RSG GG G + R K+ GGPDGG GG+GG ++++ N TL+ RY Sbjct: 5 FVDYVKICCRSGKGGRGSMHLRHVKYNYNGGPDGGDGGKGGSIYLRGNHNYWTLLHLRYD 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G + RSGA G+DV + VP GT V+ + ICD+ ++GQ ++L GG Sbjct: 65 RHIFAEHGGDGGRDKRSGADGKDVYIDVPCGTVVYNAETGKYICDVTEDGQEVLLLKGGR 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F+++TNQAP YA PG QE I L+LKL+AD+G++G PNAGKST +++++ A Sbjct: 125 GGLGNFQFRTATNQAPRYAQPGEPMQELTIILELKLLADVGLVGFPNAGKSTLVSAISSA 184 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+YPFTTL P+LGIV+ +K F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 185 RPKIANYPFTTLEPSLGIVEYRDHKSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 244 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V ++++ Y +L+EL +N ++ K ++ +++ D +D + + L T Sbjct: 245 FMVPGDTDDIKREYDILLNELRTFNPDMMDKHRVLAVTKCDLLDDELIEMLHETLPT--- 301 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFS 328 +P F S++TG G+ ++ + L ++ S Sbjct: 302 DLPVVFISAVTGKGLNELKDILWQELNS 329 >gi|297205871|ref|ZP_06923266.1| obg family GTPase CgtA [Lactobacillus jensenii JV-V16] gi|297148997|gb|EFH29295.1| obg family GTPase CgtA [Lactobacillus jensenii JV-V16] Length = 432 Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 149/338 (44%), Positives = 214/338 (63%), Gaps = 10/338 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EK++ GGP GG GGRGG + A S L TL+DFRY+ Sbjct: 4 FVDQTKIEVQAGKGGDGMVAFRHEKYVPNGGPAGGDGGRGGSIIFVADSGLRTLMDFRYR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA +GE G +++ G +D+ L VPVGT V + +I D+ ++GQ +++A GG Sbjct: 64 RKFKADNGENGRIKSQYGRGAKDLYLKVPVGTVVSDFFTGEIIGDMTKKGQELVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +S N AP A G G+ + + L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 124 GGRGNIHFATSVNTAPEIAENGEPGEFRTLKLELKVLADVGLVGFPSVGKSTLLSVVTKA 183 Query: 183 KPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG +V ++F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIAAYEFTTLTPNLGMVVLNDGRDFSMADLPGLIEGASQGVGLGIQFLRHVERTKVIL 243 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H+VS N + A Y+ I ELS Y ++L KK EI+ SQ+D S + K L Sbjct: 244 HLVSMDPNNGRDAVEDYKIIRKELSNYTADLTKKREIIVASQMDIPGSEEKFTEFKQGLE 303 Query: 298 TQCGQVP-FEFSSITGHGIPQILECLHDKIFSIRGENE 334 + P F+ SS+T G LE L +K + E E Sbjct: 304 KLGIEEPIFKISSVTHQG----LELLMNKAADLVAEVE 337 >gi|325914859|ref|ZP_08177194.1| GTP-binding protein Obg/CgtA [Xanthomonas vesicatoria ATCC 35937] gi|325538950|gb|EGD10611.1| GTP-binding protein Obg/CgtA [Xanthomonas vesicatoria ATCC 35937] Length = 349 Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 151/321 (47%), Positives = 211/321 (65%), Gaps = 8/321 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MK +DEA++ + +G+GG G + FRREKFI GGPDGG GG GG VWI + N+NTL+DFR Sbjct: 1 MKLVDEAEILVTAGNGGNGCVGFRREKFIPLGGPDGGDGGAGGSVWIVSDENVNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ FKAQ GE GM R G GED V+ VPVGT V +I DL Q G R+++A G Sbjct: 61 HERTFKAQRGENGMGRQAYGKGGEDRVIVVPVGTVVINVQTDEVIGDLTQHGDRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + G G+E+++ L+LKL+AD+G++G PNAGKST + +V+ Sbjct: 121 GKGGLGNMHFKSSVNRAPRQSTTGEEGEERLLKLELKLLADVGLLGFPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTLYPNLG+V E Y+ F++AD+PG+I+ A GAG+G +FL+H +RT + Sbjct: 181 SATPKVADYPFTTLYPNLGVVSVEAYRSFVIADVPGLIEGAADGAGLGTQFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQAA----YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 LLH+V S ++ V + + I EL +++EL KK + L++ D + D Sbjct: 241 LLHLVDISPMDGGVDVSPVDQVRTIERELERHDAELLKKPRWLVLNKADLMFEDEARAAA 300 Query: 294 NELATQCG-QVPFEFSSITGH 313 + + G P+ S G Sbjct: 301 ETIVAELGWTAPWYLVSALGR 321 >gi|295706742|ref|YP_003599817.1| Spo0B-associated GTP binding protein Obg [Bacillus megaterium DSM 319] gi|294804401|gb|ADF41467.1| Spo0B-associated GTP binding protein Obg [Bacillus megaterium DSM 319] Length = 428 Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 140/329 (42%), Positives = 212/329 (64%), Gaps = 7/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KVY++ GDGG G ++FRREK++ GGP GG GG G DV + L TL+DFRY+ Sbjct: 2 FVDQVKVYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGHGADVIFEVEEGLRTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM + + G E +V+ VP GT V +ED I DL + GQR ++A GG Sbjct: 62 RHFKASRGEHGMSKGQHGRNAEPMVVKVPPGTVVLDEDTNETIADLVEHGQRAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G G+E+ + L+LK++AD+G++G P+ GKST L+ + A Sbjct: 122 GGRGNTRFATPANPAPELSENGEPGKERNVILELKVLADVGLVGFPSVGKSTLLSVTSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTT+ PNLG+V+ E + F++AD+PG+I+ AH+G G+G +FL+H ERT V++ Sbjct: 182 KPKIAEYHFTTINPNLGVVETEDNRSFVMADLPGLIEGAHEGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE + Y I +EL YN L ++ ++V +++D + + LA K ++ Sbjct: 242 HVIDMSGLEGRDPYEDYLTINEELRQYNMRLTERPQVVVANKMDIPQAEENLAAFKEKVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI 326 + P S+ T +GI ++L + D + Sbjct: 302 DEVKVFP--ISAATRNGIRELLFTVADLV 328 >gi|90417177|ref|ZP_01225104.1| GTP-binding protein, GTP1/Obg family protein [marine gamma proteobacterium HTCC2207] gi|90330953|gb|EAS46214.1| GTP-binding protein, GTP1/Obg family protein [marine gamma proteobacterium HTCC2207] Length = 404 Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 150/332 (45%), Positives = 221/332 (66%), Gaps = 6/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +++G GG G +SFRREK+I GGPDGG GG GG V++ A LNTLIDFR Sbjct: 1 MKFVDEATIKVQAGKGGNGCMSFRREKYIPKGGPDGGDGGDGGSVFLVAAEGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + ++F+A++GE+G + +GA GED+++ VPVGT V E+ ++ DL + GQ++ +A G Sbjct: 61 FTRNFRAENGEQGRGSDCTGAGGEDLIMQVPVGTTVLCEETGDVLGDLTELGQQLKVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSS N+AP +PG G+ + I L+LK++AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GFHGLGNARFKSSVNRAPRQTSPGSEGELREIKLELKVLADVGLLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+A+YPFTTL PNLG+V G K F++ADIPG+I+ A +GAG+G RFLKH RT + Sbjct: 181 AARPKVANYPFTTLVPNLGVVGMSGDKSFVVADIPGLIEGASEGAGLGIRFLKHLTRTRL 240 Query: 240 LLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK-KNE 295 LLH+V + + + I EL+ ++ L + L++ D + + + + KN Sbjct: 241 LLHLVDMMPYDGTTPAENTVVIEQELAKFSQTLADGDRWLVLNKTDLMPEEEVEQACKNV 300 Query: 296 LATQCGQVP-FEFSSITGHGIPQILECLHDKI 326 + T Q P F S+I+ G + + D I Sbjct: 301 VETLNWQGPVFIISAISAQGTKALCAAIMDYI 332 >gi|227535166|ref|ZP_03965215.1| GTP-binding protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187211|gb|EEI67278.1| GTP-binding protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 428 Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 139/324 (42%), Positives = 202/324 (62%), Gaps = 7/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ +V +++G GG G ++FRREKF+ FGGP GG GG GG + + L TL+DFRYQ Sbjct: 2 FVDQVQVEVQAGKGGDGMVAFRREKFVPFGGPAGGDGGHGGSIILYVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G G + G ED + VP GT V + D ++ DL + GQ +++A GG Sbjct: 62 RHFKASAGGNGQGKQMYGRAAEDRRIAVPAGTTVTDADTGEVLGDLTEPGQTLVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S N AP + G G+ + I L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 122 GGRGNMHFVSPKNTAPEISENGEPGEHRFIKLELKVLADVGLVGFPSVGKSTLLSVVTQA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V+ + +F++AD+PG+I+ A QG G+G +FL+H ERT VLL Sbjct: 182 KPKIAAYQFTTLVPNLGMVQLDDGTDFVMADLPGLIEGASQGVGLGIQFLRHVERTRVLL 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H+V +N + Y I EL AY+ + K+ E+V +++D ++ A K L Sbjct: 242 HLVEMDPDNGREPLDDYDQIRKELGAYDDNILKRPELVVATKMDLPGAAERFADFKASLL 301 Query: 298 TQ--CGQVPFEFSSITGHGIPQIL 319 + FE SS+T G+ ++ Sbjct: 302 ARGVAADHIFEISSLTHRGVTPLM 325 >gi|229493244|ref|ZP_04387036.1| Spo0B-associated GTP-binding protein [Rhodococcus erythropolis SK121] gi|229319975|gb|EEN85804.1| Spo0B-associated GTP-binding protein [Rhodococcus erythropolis SK121] Length = 483 Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 132/342 (38%), Positives = 195/342 (57%), Gaps = 14/342 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++ +G GG G S REKF GGPDG +GGRGGDV + N++TL+DF + Sbjct: 3 RFIDRVVLHVSAGKGGNGCASVHREKFKPLGGPDGANGGRGGDVILVVDENIHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + KA +G++G NR GA GED++L VP GT V + DG +++ DL G R A GG Sbjct: 63 HPNAKATNGKQGAGSNREGANGEDLILKVPDGTVVLDTDG-NVLADLVGVGSRFDAAQGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G E+ + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 RGGLGNAALASKARKAPGFALLGEDGVERDLVLELKSVADVGLLGFPSAGKSSLVSVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A +G G+G FL+H ER VL Sbjct: 182 AKPKIADYPFTTLVPNLGVVSSGDTTFTVADVPGLIPGASEGRGLGLDFLRHIERCAVLA 241 Query: 242 HIVSALE----ENVQAAYQCILDELSAYNS---------ELRKKIEIVGLSQIDTVDSDT 288 H++ + + + EL+AY +L K+ +V L++ D ++ Sbjct: 242 HVIDCATLDPGRDPISDIDALEAELAAYTPALSGDSGLGDLDKRPRVVILNKTDVPEAAE 301 Query: 289 LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 LA G F S+++ G+ + L + R Sbjct: 302 LAEMVTPEIEARGWPVFTISAVSREGLRPLTFALAKMVRDYR 343 >gi|15894542|ref|NP_347891.1| GTPase ObgE [Clostridium acetobutylicum ATCC 824] gi|81854856|sp|Q97JL4|OBG_CLOAB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|15024187|gb|AAK79231.1|AE007639_4 SPO0B-associated GTPase, obg [Clostridium acetobutylicum ATCC 824] gi|325508675|gb|ADZ20311.1| GTPase ObgE [Clostridium acetobutylicum EA 2018] Length = 424 Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 135/325 (41%), Positives = 207/325 (63%), Gaps = 6/325 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+A+++++SGDGG G +SFRREK+I GGPDGG GG GGDV + N+ TL+DF+Y+ Sbjct: 2 FVDKARIFVKSGDGGDGAVSFRREKYIPLGGPDGGDGGEGGDVILVVDPNMTTLLDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + ++ G+ G G G+D+ + VP+GT + + + ++ DL + + ++ GG Sbjct: 62 RKYVSERGQNGQGAKCYGRDGKDLYIKVPMGTIIRDVETDKIMADLAHKDDKFVIVKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + T QAP +A PG+ G+E+ I L+LKL+AD+G+IG PN GKST L+ ++A Sbjct: 122 GGKGNVKFCTPTRQAPNFAQPGMPGEERWISLELKLLADVGLIGFPNVGKSTLLSVASKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V G F++ADIPGII+ A +G G+G FL+H ERT +L+ Sbjct: 182 RPKIANYHFTTITPNLGVVDVSGISSFVMADIPGIIEGASEGVGLGFEFLRHIERTRLLV 241 Query: 242 HIVSALEENVQAAYQCIL---DELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H+V + + L +EL YN +L + +IV ++ D V D D + + EL Sbjct: 242 HVVDISGSEGRDPLEDFLKINEELKKYNIKLWDRPQIVAANKADMVYDDDQFNKFREELN 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL-EC 321 + F+ S+ T G+ +L EC Sbjct: 302 KLGYKNVFKISAATRMGVEDLLKEC 326 >gi|312869021|ref|ZP_07729198.1| Obg family GTPase CgtA [Lactobacillus oris PB013-T2-3] gi|311095447|gb|EFQ53714.1| Obg family GTPase CgtA [Lactobacillus oris PB013-T2-3] Length = 440 Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 141/331 (42%), Positives = 211/331 (63%), Gaps = 9/331 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +G GG G ++FRREK++ GGP GG GG GG + ++ L TL+DFRY Sbjct: 4 FVDQIKIEAHAGKGGDGMVAFRREKYVPNGGPAGGDGGHGGSIVLKVDEGLRTLMDFRYH 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++G GM + +G D V+ VP GT V + D +I DL + GQ +++A GG Sbjct: 64 RIFKAKNGGNGMNKQMTGPSAPDTVIAVPQGTTVRDLDTGQIIGDLVENGQELVIAQGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S+ N AP A G G+++ + L+LK++AD+G+IG P+ GKST L+ VT A Sbjct: 124 GGRGNIHFASAKNPAPEIAENGEPGEDRYLELELKMLADVGLIGFPSVGKSTLLSVVTGA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V ++F +AD+PG+I+ A +G G+G +FL+H ERT VLL Sbjct: 184 KPKIAAYEFTTLVPNLGMVMLPDGRDFAMADMPGLIEGASKGIGLGLKFLRHIERTRVLL 243 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKKNELA 297 H+V E+ A Y+ I EL+ Y+ EL K+ +IV +++D +++ LA + +LA Sbjct: 244 HLVDMSSEDENQAIERYRQINQELANYDPELLKRPQIVVATKMDLPNAEKNLAVFQKQLA 303 Query: 298 T--QCGQVP--FEFSSITGHGIPQILECLHD 324 T + P F S++T G+ ++++ D Sbjct: 304 TDKSLEKQPAIFPISAVTHQGVQKLMQLTAD 334 >gi|239631571|ref|ZP_04674602.1| GTPase ObgE [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526036|gb|EEQ65037.1| GTPase ObgE [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 428 Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 139/324 (42%), Positives = 202/324 (62%), Gaps = 7/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ +V +++G GG G ++FRREKF+ FGGP GG GG GG + + L TL+DFRYQ Sbjct: 2 FVDQVQVEVQAGKGGDGMVAFRREKFVPFGGPAGGDGGHGGSIILYVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G G + G ED + VP GT V + D ++ DL + GQ +++A GG Sbjct: 62 RHFKASAGGNGQGKQMYGRAAEDRRIAVPAGTTVTDADTGKVLGDLTEPGQTLVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S N AP + G G+ + I L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 122 GGRGNMHFVSPKNTAPEISENGEPGEHRFIKLELKVLADVGLVGFPSVGKSTLLSVVTQA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V+ + +F++AD+PG+I+ A QG G+G +FL+H ERT VLL Sbjct: 182 KPKIAAYQFTTLVPNLGMVQLDDGTDFVMADLPGLIEGASQGVGLGIQFLRHVERTRVLL 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H+V +N + Y I EL AY+ + K+ E+V +++D ++ A K L Sbjct: 242 HLVEMDPDNGREPLDDYDQIRKELGAYDDNILKRPELVVATKMDLPGAAERFADFKAALL 301 Query: 298 TQ--CGQVPFEFSSITGHGIPQIL 319 + FE SS+T G+ ++ Sbjct: 302 ARGVAADHIFEISSLTHRGVTPLM 325 >gi|152976856|ref|YP_001376373.1| GTPase ObgE [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025608|gb|ABS23378.1| GTP-binding protein Obg/CgtA [Bacillus cytotoxicus NVH 391-98] Length = 428 Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 137/322 (42%), Positives = 212/322 (65%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y+++GDGG G +++RREK++ GGP GG GG+G DV Q L TL+DFRYQ Sbjct: 2 FVDQVKIYVKAGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFQVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM +N+ G K +D+++ VP GT V + ++ DL GQ ++A GG Sbjct: 62 RHFKADRGQHGMSKNQHGRKADDLIVKVPPGTVVKDVKTGHILADLVTHGQSAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATPTNPAPEIAENGEPGQERDVILELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE + Y I +EL YN L ++ ++V +++D D+ + L K ++ Sbjct: 242 HVIDMSGLEGRDPYEDYVTINNELKEYNLRLTERPQVVVANKMDMPDAEENLQAFKEKVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 302 DEVKIFP--ISAVTKQGVRDLL 321 >gi|170758211|ref|YP_001788298.1| GTPase ObgE [Clostridium botulinum A3 str. Loch Maree] gi|261266740|sp|B1KZR3|OBG_CLOBM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|169405200|gb|ACA53611.1| GTPase, Obg family [Clostridium botulinum A3 str. Loch Maree] Length = 424 Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 136/323 (42%), Positives = 204/323 (63%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK++++SG GG G ISFRREK+I FGGPDGG GG+GG+V + N+ TL+DF Y+ Sbjct: 2 FIDTAKIFVKSGKGGDGSISFRREKYIAFGGPDGGDGGKGGNVVLVVDPNMTTLLDFTYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA+ G G G G+D+ + VP+GT V + + ++ DL + ++A GG Sbjct: 62 RKYKAEPGGNGAGSKCFGKNGKDLHIKVPMGTIVKDAETDKIMADLSKPEDSYVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + T QAP +A PG+ +E+ I L+LKL+AD+G+IG PN GKST L+ V++A Sbjct: 122 GGKGNCRFTTPTRQAPDFAEPGMPEEERWIKLELKLLADVGLIGFPNVGKSTLLSVVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V EG F++ADIPGII+ A +G G+G FL+H ERT VL+ Sbjct: 182 RPKIANYHFTTLKPNLGVVSIEGVSNFVIADIPGIIEGASEGVGLGLDFLRHVERTRVLI 241 Query: 242 HIVSALEENVQAAYQCIL---DELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H++ + Y L +EL YN +L + +I+ ++ D + D + K ++ Sbjct: 242 HVIDISSVEGRDPYDDFLKINEELKRYNVKLYGRPQIIAANKSDMLFDEEKFEEFKTKVE 301 Query: 298 TQCGQVPFEFSSITGHGIPQILE 320 F+ S+ T G+ +++ Sbjct: 302 KHGYNKVFKISAATKQGVDDLMK 324 >gi|206896387|ref|YP_002246902.1| Spo0B-associated GTP-binding protein [Coprothermobacter proteolyticus DSM 5265] gi|261266745|sp|B5Y805|OBG_COPPD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|206739004|gb|ACI18082.1| Spo0B-associated GTP-binding protein [Coprothermobacter proteolyticus DSM 5265] Length = 419 Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 138/330 (41%), Positives = 215/330 (65%), Gaps = 7/330 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D A++ + G GG G SFRREKFIE GGPDGG GG+GGDV++ L TL DF+ Sbjct: 1 MIFIDTAEIIVYGGKGGDGAASFRREKFIEKGGPDGGDGGKGGDVYLVTDPALLTLYDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ+ F+A+ GE G + + G G+D+ + +PVG V + + + D+D+ G ++++A G Sbjct: 61 YQKEFRAEDGEPGRSQKQFGKDGKDLFIRIPVGVIVADLE-TQTVVDMDKPGMKLLVARG 119 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA ++T +AP + G G+ + + L+LKL+A +G++GLPNAGKS+ ++ ++ Sbjct: 120 GRGGKGNARMATATRRAPRFRELGHEGEMRRLRLELKLVAHVGLVGLPNAGKSSLISVIS 179 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +AKP+IA YPFTT P LGIVK+ + F+++D+PG+I+ AH+G G+G FL+H ERT VL Sbjct: 180 KAKPEIAPYPFTTRSPVLGIVKKAEQSFVVSDVPGLIEGAHEGKGLGLTFLRHVERTKVL 239 Query: 241 LHIVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 ++ A E +Q AY+ I+ EL AYN L +K ++ L++ID + + + + K + Sbjct: 240 AIVIDAAAIDGYEPMQ-AYETIIGELRAYNPNLLEKPRVLVLNKIDLLQPEHIDQLKVQF 298 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 A + V S+ TG G Q+++ L + I Sbjct: 299 ADKESHVVLT-SAATGEGTNQLVDVLFELI 327 >gi|191638345|ref|YP_001987511.1| GTPase ObgE [Lactobacillus casei BL23] gi|261266841|sp|B3WE52|OBG_LACCB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|190712647|emb|CAQ66653.1| GTP-binding protein [Lactobacillus casei BL23] gi|327382372|gb|AEA53848.1| GTPase obg [Lactobacillus casei LC2W] gi|327385573|gb|AEA57047.1| GTPase obg [Lactobacillus casei BD-II] Length = 428 Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 139/324 (42%), Positives = 202/324 (62%), Gaps = 7/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ +V +++G GG G ++FRREKF+ FGGP GG GG GG + + L TL+DFRYQ Sbjct: 2 FVDQVQVEVQAGKGGDGMVAFRREKFVPFGGPAGGDGGHGGSIILYVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G G + G ED + VP GT V + D ++ DL + GQ +++A GG Sbjct: 62 RHFKASAGGNGQGKQMYGRAAEDRRIAVPAGTTVTDADTGEVLGDLTEPGQTLVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S N AP + G G+ + I L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 122 GGRGNMHFVSPKNTAPEISENGEPGEHRFIKLELKVLADVGLVGFPSVGKSTLLSVVTQA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V+ + +F++AD+PG+I+ A QG G+G +FL+H ERT VLL Sbjct: 182 KPKIAAYQFTTLVPNLGMVQLDDGTDFVMADLPGLIEGASQGVGLGIQFLRHVERTRVLL 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H+V +N + Y I EL AY+ + K+ E+V +++D ++ A K L Sbjct: 242 HLVEMDPDNGREPLDDYDQIRKELGAYDDNILKRPELVVATKMDLPGAAERFADFKAALL 301 Query: 298 TQ--CGQVPFEFSSITGHGIPQIL 319 + FE SS+T G+ ++ Sbjct: 302 ARGVAADHIFEISSLTHRGVTPLM 325 >gi|116494837|ref|YP_806571.1| GTPase ObgE [Lactobacillus casei ATCC 334] gi|301066399|ref|YP_003788422.1| putative GTPase [Lactobacillus casei str. Zhang] gi|122263745|sp|Q039J3|OBG_LACC3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|116104987|gb|ABJ70129.1| Predicted GTPase [Lactobacillus casei ATCC 334] gi|300438806|gb|ADK18572.1| Predicted GTPase [Lactobacillus casei str. Zhang] Length = 428 Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 139/324 (42%), Positives = 202/324 (62%), Gaps = 7/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ +V +++G GG G ++FRREKF+ FGGP GG GG GG + + L TL+DFRYQ Sbjct: 2 FVDQVQVEVQAGKGGDGMVAFRREKFVPFGGPAGGDGGHGGSIILYVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G G + G ED + VP GT V + D ++ DL + GQ +++A GG Sbjct: 62 RHFKASAGGNGQGKQMYGRAAEDRRIAVPAGTTVTDADTGEVLGDLTEPGQTLVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S N AP + G G+ + I L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 122 GGRGNMHFVSPKNTAPEISENGEPGEHRFIKLELKVLADVGLVGFPSVGKSTLLSVVTQA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V+ + +F++AD+PG+I+ A QG G+G +FL+H ERT VLL Sbjct: 182 KPKIAAYQFTTLVPNLGMVQLDDGTDFVMADLPGLIEGASQGVGLGIQFLRHVERTRVLL 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H+V +N + Y I EL AY+ + K+ E+V +++D ++ A K L Sbjct: 242 HLVEMDPDNGREPLDDYDQIRKELGAYDDNILKRPELVVATKMDLPGAAERFADFKAALL 301 Query: 298 TQ--CGQVPFEFSSITGHGIPQIL 319 + FE SS+T G+ ++ Sbjct: 302 ARGVAADHIFEISSLTHRGVTPLM 325 >gi|253581975|ref|ZP_04859199.1| SPO0B-associated GTP-binding protein [Fusobacterium varium ATCC 27725] gi|251836324|gb|EES64861.1| SPO0B-associated GTP-binding protein [Fusobacterium varium ATCC 27725] Length = 428 Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 140/322 (43%), Positives = 207/322 (64%), Gaps = 6/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE V +++G+GG G +FRREK+I+FGGPDGG GG GG+V A N+NTLIDF+++ Sbjct: 2 FIDEVIVTVKAGNGGDGSAAFRREKYIQFGGPDGGDGGNGGNVIFIADPNINTLIDFKFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++GE G K+ G G D+++ VPVGTQV + + L+ D+ EG+ L GG Sbjct: 62 KVFKAENGENGQKKQMYGKTGADLIIKVPVGTQVRDVETGKLLLDMSVEGEPRTLLKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSST + P A G G E + L+LKL+AD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGAGNVHFKSSTRKTPRIAGKGREGAEIKVKLELKLLADVALVGYPSVGKSSFINKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K+ Y FTTL P LG+V+ E K F++ADIPG+I+ AH+G G+GD+FL+H ER ++ Sbjct: 182 NSKVGSYHFTTLEPKLGVVRLEEGKSFVIADIPGLIEGAHEGVGLGDKFLRHIERCKMIY 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H+V E + A Y+ I +EL ++ +L K +IV +++D + D + + K + Sbjct: 242 HLVDVAEIEGRDAIEDYEKINEELKKFSEKLSTKKQIVLANKMDLLWDMEKYEKFKAHVE 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 Q +V F S I GI ++L Sbjct: 302 AQGHEV-FPVSVILNEGIKEVL 322 >gi|332291193|ref|YP_004429802.1| GTP-binding protein Obg/CgtA [Krokinobacter diaphorus 4H-3-7-5] gi|332169279|gb|AEE18534.1| GTP-binding protein Obg/CgtA [Krokinobacter diaphorus 4H-3-7-5] Length = 332 Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 142/322 (44%), Positives = 210/322 (65%), Gaps = 3/322 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K++ SG+GG+G REKFIE GGPDGG GGRGG + I+ +NL TLI +++ Sbjct: 6 FVDYVKIHTTSGNGGSGSAHLHREKFIEKGGPDGGDGGRGGHIIIRGNTNLWTLIHLKFK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H +A HG G K +G G D + VP+GT + + + ++ ++ ++GQ I A GG Sbjct: 66 KHLRAGHGGNGAKSRSTGHDGVDEYIEVPLGTTIKDTETDQVLFEITEDGQEFIAARGGM 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+STNQ P ++ PGI G E + L+LK++AD+G++G PN GKST LA++T A Sbjct: 126 GGRGNWHFKTSTNQTPRHSQPGIDGYEVHLTLELKVLADVGLVGFPNVGKSTLLAAITAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLGIV ++ F++ADIPGII+ A +G G+G RFL+H ER LL Sbjct: 186 KPKIANYEFTTLKPNLGIVAYRDFRSFVMADIPGIIEGAAEGRGLGHRFLRHIERNSTLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A +++ Y+ +L+EL YN EL K ++ +++ D +D + A EL + Sbjct: 246 FMIPADADSIAEQYEILLNELQKYNPELLDKSRLIAITKSDMLDEELKAEVSEELDREL- 304 Query: 302 QVPFEF-SSITGHGIPQILECL 322 +P+ F SSI G+ ++ + L Sbjct: 305 PIPYLFISSIAQQGLVELKDAL 326 >gi|300869946|ref|YP_003784817.1| putative GTPase ObgE [Brachyspira pilosicoli 95/1000] gi|300687645|gb|ADK30316.1| putative GTPase, ObgE [Brachyspira pilosicoli 95/1000] Length = 680 Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 142/332 (42%), Positives = 214/332 (64%), Gaps = 5/332 (1%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D I +G GGAG +SFRRE + GGPDGG+GG GGDV ++ + +N+ + Sbjct: 3 QFIDVVNFEIEAGHGGAGCVSFRREAHVPMGGPDGGNGGEGGDVIVRVDARINSFGKIKS 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 ++ F+A+ GE G R G KG+DVV+ VP+GT V+++D +++ DL ++GQ +A GG Sbjct: 63 RKRFRARDGEPGRARLSDGKKGDDVVIRVPIGTVVYDDDTNNILADLLEDGQSFTVARGG 122 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN + ++TNQAP YA G+ G++ I L++KLIADIG++G+PNAGKS+ LA +TR Sbjct: 123 KGGKGNKFYATATNQAPDYAQHGLDGEKLNIRLEVKLIADIGLVGMPNAGKSSLLARLTR 182 Query: 182 AKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PKIA YPFTTL PNLG+ Y + F++ADIPGII+ A +GAG+G FL+H ERT L Sbjct: 183 ANPKIASYPFTTLTPNLGVCYLDYERSFVIADIPGIIEGASEGAGLGLTFLRHIERTGAL 242 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 ++ +E+V Y+ + +EL Y+ EL KK I+ L++ D ++ D + K + Sbjct: 243 CFVIDLTDEDVVDTYKKLRNELKQYSKELIKKKSIIVLNKTDMLEEDEIKEKVKAIEKAV 302 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + ++ + T + P+I +FS+ GE Sbjct: 303 KK-EYKNNKETHYEEPEIFAL---SVFSLDGE 330 >gi|226307279|ref|YP_002767239.1| GTP-binding protein Obg [Rhodococcus erythropolis PR4] gi|261277736|sp|C1A1L5|OBG_RHOE4 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|226186396|dbj|BAH34500.1| probable GTP-binding protein Obg [Rhodococcus erythropolis PR4] Length = 483 Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 132/342 (38%), Positives = 195/342 (57%), Gaps = 14/342 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++ +G GG G S REKF GGPDG +GGRGGDV + N++TL+DF + Sbjct: 3 RFIDRVVLHVSAGKGGNGCASVHREKFKPLGGPDGANGGRGGDVILVVDENIHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + KA +G++G NR GA GED++L VP GT V + DG +++ DL G R A GG Sbjct: 63 HPNAKATNGKQGAGSNREGANGEDLILKVPDGTVVLDTDG-NVLADLVGVGSRYDAAQGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G E+ + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 RGGLGNAALASKARKAPGFALLGEDGVERDLVLELKSVADVGLLGFPSAGKSSLVSVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A +G G+G FL+H ER VL Sbjct: 182 AKPKIADYPFTTLVPNLGVVSSGDTTFTVADVPGLIPGASEGRGLGLDFLRHIERCAVLA 241 Query: 242 HIVSALE----ENVQAAYQCILDELSAYNS---------ELRKKIEIVGLSQIDTVDSDT 288 H++ + + + EL+AY +L K+ +V L++ D ++ Sbjct: 242 HVIDCATLDPGRDPISDIDALEAELAAYTPALSGDSGLGDLDKRPRVVILNKTDVPEAAE 301 Query: 289 LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 LA G F S+++ G+ + L + R Sbjct: 302 LAEMVTPEIEARGWPVFTISAVSREGLRPLTFALAKMVRDYR 343 >gi|269121006|ref|YP_003309183.1| GTP-binding protein Obg/CgtA [Sebaldella termitidis ATCC 33386] gi|268614884|gb|ACZ09252.1| GTP-binding protein Obg/CgtA [Sebaldella termitidis ATCC 33386] Length = 428 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 141/322 (43%), Positives = 208/322 (64%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE+ +Y++SGDGG G +FRREKF++FGGP+GG GG+GG++ + SN+NTL+DF+Y Sbjct: 2 FIDESIIYLKSGDGGDGAATFRREKFVQFGGPNGGDGGKGGNIVFETDSNINTLVDFKYS 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A +GE G K +G GED+++ VPVGT + + + L+ DL++E + + GG+ Sbjct: 62 KKFVASNGENGRKNRAAGKSGEDLIIKVPVGTMIRDIETNKLLLDLNEENMKAVFLKGGD 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSS +AP A G G E + L+LKL+AD ++G P+ GKS+F+ V+ A Sbjct: 122 GGRGNVHFKSSIRKAPKLAESGREGLELKVKLELKLLADAALVGYPSVGKSSFINKVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K+A Y FTTL P LG+V+ G K F++ADIPG+I+ AH G G+GDRFL+H ER V+L Sbjct: 182 GSKVASYHFTTLKPKLGVVRLGDEKSFVVADIPGLIEGAHTGTGLGDRFLRHIERCKVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 HIV S ++ + + + I EL Y+ +L KK +IV ++ID + D + E Sbjct: 242 HIVDISGMDGRDPKDDFVKINKELENYSEKLSKKKQIVIANKIDMLFDDEKYNEFEEFVK 301 Query: 299 QCG-QVPFEFSSITGHGIPQIL 319 G + F S + G GI ++ Sbjct: 302 SMGYEKVFPVSVLAGEGIKDVI 323 >gi|55981750|ref|YP_145047.1| GTPase ObgE [Thermus thermophilus HB8] gi|81821796|sp|Q5SHE9|OBG_THET8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg; AltName: Full=TT1381 gi|47169233|pdb|1UDX|A Chain A, Crystal Structure Of The Conserved Protein Tt1381 From Thermus Thermophilus Hb8 gi|41052539|dbj|BAC76805.2| conserved hypothetical protein TT1381 [Thermus thermophilus] gi|55773163|dbj|BAD71604.1| probable GTP-binding protein [Thermus thermophilus HB8] Length = 416 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 144/327 (44%), Positives = 216/327 (66%), Gaps = 4/327 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + +G GG G +SFRREKF+ GGPDGG GGRGG V+++A ++++L + Sbjct: 2 FQDVLVITVAAGRGGDGAVSFRREKFVPKGGPDGGDGGRGGSVYLRARGSVDSLSRL-SK 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA+ GE G + G GED+V+ VP GT+VF+ D L+ DL +EGQ +++A GG Sbjct: 61 RTYKAEDGEHGRGSQQHGRGGEDLVIEVPRGTRVFDADTGELLADLTEEGQTVLVARGGA 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S T QAP +A G G+++ + L+L LIAD+G++G PNAGKS+ LA++TRA Sbjct: 121 GGRGNMHFVSPTRQAPRFAEAGEEGEKRRLRLELMLIADVGLVGYPNAGKSSLLAAMTRA 180 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 PKIA YPFTTL PNLG+V+ +E F LADIPGII+ A +G G+G FL+H RT VLL Sbjct: 181 HPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGASEGKGLGLEFLRHIARTRVLL 240 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +++ A +E ++ + + E+ AY+ L ++ +V L+++D ++ + + + LA + G Sbjct: 241 YVLDAADEPLK-TLETLRKEVGAYDPALLRRPSLVALNKVDLLEEEAVKALADALARE-G 298 Query: 302 QVPFEFSSITGHGIPQILECLHDKIFS 328 S++TG G+P + E LH + S Sbjct: 299 LAVLPVSALTGAGLPALKEALHALVRS 325 >gi|167746508|ref|ZP_02418635.1| hypothetical protein ANACAC_01218 [Anaerostipes caccae DSM 14662] gi|317471322|ref|ZP_07930680.1| obg family GTPase CgtA [Anaerostipes sp. 3_2_56FAA] gi|167653468|gb|EDR97597.1| hypothetical protein ANACAC_01218 [Anaerostipes caccae DSM 14662] gi|316901200|gb|EFV23156.1| obg family GTPase CgtA [Anaerostipes sp. 3_2_56FAA] Length = 427 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 148/324 (45%), Positives = 211/324 (65%), Gaps = 7/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D A +YIRSG GG+G +SFRRE ++ GGPDGG GGRGGDV +NTL D+R++ Sbjct: 2 FADRANIYIRSGKGGSGHVSFRRELYVPNGGPDGGDGGRGGDVIFAVDEGMNTLADYRHK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA GE+G KR GA GED+VL VP GT + E++ +I D+ + + ++L GG Sbjct: 62 RKYKAGDGEEGGKRRCHGADGEDIVLKVPPGTIIKEKETGKVILDMSNKKEPVVLLKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+ ++ QAP YA PG QE + L+LK+IAD+G++G PN GKSTFL+ VT A Sbjct: 122 GGKGNQHYATAVMQAPKYAQPGGKCQELEVTLELKVIADVGLVGFPNVGKSTFLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V G K F++ADIPGII+ A +G G+G FL+H +RT V++ Sbjct: 182 RPKIANYHFTTLNPNLGVVDLAGGKGFVIADIPGIIEGASEGVGLGFEFLRHIDRTKVMI 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKNE 295 H+V A + A + I EL YN E+ K+ +++ ++ID + D +T+ E Sbjct: 242 HLVDAASVEGRDPIADIRAINGELEKYNPEILKRPQVIAANKIDAMTEEDRETVLDLLKE 301 Query: 296 LATQCGQVPFEFSSITGHGIPQIL 319 + G F S++TG G+ ++L Sbjct: 302 EFAENGIEVFPISAVTGEGVKELL 325 >gi|294501394|ref|YP_003565094.1| Spo0B-associated GTP binding protein Obg [Bacillus megaterium QM B1551] gi|294351331|gb|ADE71660.1| Spo0B-associated GTP binding protein Obg [Bacillus megaterium QM B1551] Length = 428 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 140/329 (42%), Positives = 211/329 (64%), Gaps = 7/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KVY++ GDGG G ++FRREK++ GGP GG GG G DV + L TL+DFRY+ Sbjct: 2 FVDQVKVYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGHGADVIFEVEEGLRTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM + + G E +V+ VP GT V +ED I DL + GQR ++A GG Sbjct: 62 RHFKASRGEHGMSKGQHGRNAEPMVVKVPPGTVVLDEDTNETIADLVEHGQRAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G G+E+ + L+LK++AD+G++G P+ GKST L+ + A Sbjct: 122 GGRGNTRFATPANPAPELSENGEPGKERNVILELKVLADVGLVGFPSVGKSTLLSVTSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTT+ PNLG+V+ E + F++AD+PG+I+ AH+G G+G +FL+H ERT V++ Sbjct: 182 KPKIAEYHFTTINPNLGVVETEDNRSFVMADLPGLIEGAHEGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE + Y I +EL YN L ++ ++V +++D + + LA K ++ Sbjct: 242 HVIDMSGLEGRDPYEDYLTINEELRQYNMRLTERPQVVVANKMDIPQAEENLAAFKEKVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI 326 + P S+ T GI ++L + D + Sbjct: 302 DEVKVFP--ISAATRDGIRELLFTVADLV 328 >gi|332638264|ref|ZP_08417127.1| GTPase CgtA [Weissella cibaria KACC 11862] Length = 436 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 143/335 (42%), Positives = 216/335 (64%), Gaps = 12/335 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D+ K+++++G GG G +SFR EK+I GGP GG GG GG V ++ L TL+DFR Sbjct: 1 MAFVDQVKIFVKAGKGGDGAVSFRHEKYINMGGPFGGDGGHGGSVVMEVDEGLRTLMDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++HFKA G G + +G +D+++ VP GT + E + +I DL ++GQR+++A G Sbjct: 61 YKRHFKATPGGNGATKGMTGKSSDDLIIKVPQGTTITEAETGRVIGDLTEQGQRLVVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F SSTN AP A G G+E I L+LK++AD+G++G P+ GKST L+ VT Sbjct: 121 GRGGRGNMRFASSTNPAPEIAENGEPGEELDIALELKVLADVGLVGFPSVGKSTLLSVVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+A Y FTTL PNLG+V+ E ++F++AD+PG+I+ A QG G+G +FL+H ERT V Sbjct: 181 AAKPKVAAYHFTTLVPNLGMVRLEDGRDFVMADLPGLIEGASQGVGLGIQFLRHVERTRV 240 Query: 240 LLHIVSA----LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKN 294 +LH++ EE+ + I +EL+ Y+ L ++ +I+ +++D D+ +TLA K Sbjct: 241 ILHMIDMSGIDPEEDPYENFLKINNELAEYDPALLERPQIIVPTKMDMPDAEETLATFKE 300 Query: 295 ELATQCGQVP-----FEFSSITGHGIPQILECLHD 324 +LA VP SS+T G+ +++ D Sbjct: 301 KLAADP-NVPDDVEIMPISSLTRQGLEPLMQRTAD 334 >gi|238852677|ref|ZP_04643087.1| Obg family GTPase CgtA [Lactobacillus gasseri 202-4] gi|282852092|ref|ZP_06261450.1| Obg family GTPase CgtA [Lactobacillus gasseri 224-1] gi|238834823|gb|EEQ27050.1| Obg family GTPase CgtA [Lactobacillus gasseri 202-4] gi|282556852|gb|EFB62456.1| Obg family GTPase CgtA [Lactobacillus gasseri 224-1] Length = 428 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 138/323 (42%), Positives = 212/323 (65%), Gaps = 10/323 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EK++ GGP GG GGRGG + + A S L TL+DFR++ Sbjct: 2 FVDQTKIDVQAGKGGDGAVAFRHEKYVPLGGPAGGDGGRGGSIILVADSGLRTLMDFRFR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA +GE G +++ G +DV L VP+GT V++ + L+ DL + GQ +++A GG Sbjct: 62 RKFKADNGENGRIKSQYGRGAKDVRLKVPMGTSVYDFNTGELLGDLVKNGQELVVARGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + T AP A G G+ + + L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 122 GGRGNIHFATPTRTAPEIAENGEPGEFRTLRLELKVLADVGLVGFPSVGKSTLLSVVTKA 181 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+I+ A +G G+G +FL+H ERT V+ Sbjct: 182 KPKIAAYEFTTLTPNLGMVVLPDG-RDFSMADLPGLIEGASKGVGLGIQFLRHVERTKVI 240 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 LH+VS N + A Y+ I EL+ Y +L K E++ +Q+D S + LA K +L Sbjct: 241 LHLVSMDPNNGRDAYEDYETIRKELAGYTKDLTSKKELIVATQMDIPGSEEKLAEFKKKL 300 Query: 297 ATQCGQVPFEFSSITGHGIPQIL 319 + + SS+T G+ +++ Sbjct: 301 GDKT---VYPISSVTHQGVSELM 320 >gi|256545138|ref|ZP_05472504.1| Spo0B-associated GTP-binding protein [Anaerococcus vaginalis ATCC 51170] gi|256399179|gb|EEU12790.1| Spo0B-associated GTP-binding protein [Anaerococcus vaginalis ATCC 51170] Length = 427 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 144/334 (43%), Positives = 223/334 (66%), Gaps = 6/334 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 +D AK+ +++G GG G ++FRREK+ GGP GG GG G ++I+AT++L+TL ++RY+ Sbjct: 1 MIDYAKIELQAGKGGDGAVAFRREKYEPTGGPAGGDGGDGASIYIKATNSLSTLEEYRYK 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +KA +GE GM + R G KGED+ L VPVGT V E +I DL + G+ ++A GG Sbjct: 61 TKYKATNGEDGMGKKRFGKKGEDLYLYVPVGTIVRESTSGKIIKDLKKNGEEFLIAKGGK 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+KSST QAP +A G GQ+ II L+LK++AD+G++GLPN GKST ++ +++A Sbjct: 121 GGKGNVHYKSSTRQAPRFAQKGKEGQKIIISLELKILADVGLVGLPNVGKSTLISVISKA 180 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+VK + + FI+ADIPG+I+ A++G G+G FLKH +R +L+ Sbjct: 181 KPKIANYHFTTLDPNLGVVKIDKERSFIVADIPGLIEGANEGLGLGHDFLKHVQRCKILV 240 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V S E + ++ I +EL ++ L K +IV L++ D +D + +K E + Sbjct: 241 HLVDISGFEGRDPIEDFELINNELKLFDENLYNKYQIVALNKSD-LDFNGNYKKFEEKYS 299 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 ++ F+ S+ T +GI +++ + +++ E Sbjct: 300 DKYKI-FKISAATTNGIKDLIDEVSRVLYNFEDE 332 >gi|294675490|ref|YP_003576106.1| GTP1/OBG family GTP-binding protein [Prevotella ruminicola 23] gi|294473593|gb|ADE82982.1| GTP-binding protein, GTP1/OBG family [Prevotella ruminicola 23] Length = 389 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 138/328 (42%), Positives = 212/328 (64%), Gaps = 9/328 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + R K+ GGPDGG GG+GG + ++ N TL+ +Y+ Sbjct: 5 FVDYVKIYCRSGKGGKGSMHLRHVKYNPNGGPDGGDGGKGGSIILRGNHNYWTLLHLKYE 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G + G G+DV + VP GT V+ + +CD+ +GQ ++L GG Sbjct: 65 RHIFAEHGGNGGRDKCHGTDGKDVYIDVPCGTVVYNAETGKYVCDVTYDGQEVMLLKGGR 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F+++TNQAP YA PG QE I L+LKL+AD+G++G PNAGKST ++S++ A Sbjct: 125 GGLGNFQFRTATNQAPRYAQPGEPMQEMTIILELKLLADVGLVGFPNAGKSTLVSSLSNA 184 Query: 183 KPKIADYPFTTLYPNLGIVKEGY---KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 KPKIA+YPFTT+ P+LGIV GY K F++ADIPGII+ A +G G+G RFL+H ER + Sbjct: 185 KPKIANYPFTTMEPSLGIV--GYRDNKSFVMADIPGIIEGASEGKGLGLRFLRHIERNSL 242 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LL +V ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + K L Sbjct: 243 LLFMVPGDTDDIKREYEILLNELQQFNPEMLDKHRVLAVTKCDLLDEELVEMLKETLPQ- 301 Query: 300 CGQVPFEF-SSITGHGIPQILECLHDKI 326 +P F S++TG+G+ ++ + L +++ Sbjct: 302 --DLPVVFISAVTGYGLDELKDVLWNEL 327 >gi|239623850|ref|ZP_04666881.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521881|gb|EEQ61747.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 432 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 143/335 (42%), Positives = 210/335 (62%), Gaps = 8/335 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK++I+SG GG G +SFRRE ++ GGPDGG GGRGGDV Q NTL+DFR+ Sbjct: 5 FADSAKIFIKSGKGGDGHVSFRRELYVPNGGPDGGDGGRGGDVIFQVDKGKNTLVDFRHV 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ GE+G K+ GA ED+++ VP GT + + + +I D+ + QR ++ GG Sbjct: 65 RKYIARDGEQGGKKRCHGADAEDLIVKVPEGTVIKDFESGKVIADMSGDNQREVILRGGK 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST Q P YA PG G E + L+LK+IAD+G++G PN GKST L+ V+ A Sbjct: 125 GGLGNMHFATSTMQVPKYAQPGQPGAELFVQLELKVIADVGLVGFPNVGKSTLLSVVSNA 184 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P+LG+V G F++ADIPG+I+ A +G G+G FLKH ERT VL+ Sbjct: 185 KPEIANYHFTTLNPHLGVVDLGDGAGFVMADIPGLIEGASEGVGLGHAFLKHIERTKVLV 244 Query: 242 HIV---SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV----DSDTLARKKN 294 H+V S + + I EL AYN EL K+ +++ +++D V DS+ + Sbjct: 245 HVVDGASVEGRDPLEDIRTINKELEAYNPELLKRPQVIAANKMDAVYSEDDSNEILDALR 304 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 G F S+++ G+ ++L ++D + ++ Sbjct: 305 AEFEPKGIKVFAISAVSRQGVKEMLYHINDLLKTV 339 >gi|116333984|ref|YP_795511.1| GTPase ObgE [Lactobacillus brevis ATCC 367] gi|122269332|sp|Q03QP2|OBG_LACBA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|116099331|gb|ABJ64480.1| Predicted GTPase [Lactobacillus brevis ATCC 367] Length = 431 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 142/333 (42%), Positives = 213/333 (63%), Gaps = 9/333 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G+GG G ++FRREKF+ GGP GG GGRGG+V L TL+DFRYQ Sbjct: 2 FVDQVKINVKAGNGGNGMVAFRREKFVPNGGPAGGDGGRGGNVVFVVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ G G ++ +G ED ++ VP GT + + + +I DL +I+A GG Sbjct: 62 RKFKAKSGGNGAIKSMTGRGAEDTIIKVPQGTTIMDAETDQVIGDLVAPDDSVIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S N AP A G G+E+ I L+LK++AD+G++G P+ GKST L++VT A Sbjct: 122 GGRGNIHFASPKNPAPEIAENGEPGEEREIRLELKVLADVGLVGFPSVGKSTLLSTVTSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V+ ++F++AD+PG+I+ A G G+G +FL+H ERT V+L Sbjct: 182 KPKIAEYHFTTLVPNLGMVRLPDGRDFVMADLPGLIEGAANGVGLGFQFLRHVERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE ++ I EL Y+ ++ K+ +IV +++D DS + LA+ K +L Sbjct: 242 HLIDMSGLEGRTPYDDFEKINQELQTYDPDILKRPQIVVANKMDMPDSAENLAQFKEDLK 301 Query: 298 --TQCGQVP--FEFSSITGHGIPQILECLHDKI 326 T Q P F S++T G+ +L+ D + Sbjct: 302 QDTLLAQTPEIFAVSALTHDGLTPLLQRTADML 334 >gi|332286736|ref|YP_004418647.1| GTP-binding protein [Pusillimonas sp. T7-7] gi|330430689|gb|AEC22023.1| GTP-binding protein [Pusillimonas sp. T7-7] Length = 368 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 150/325 (46%), Positives = 217/325 (66%), Gaps = 13/325 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G GG G SFRREKFI GGPDGG GGRGG ++ A N+NTL+DFR Sbjct: 1 MKFVDEATIEVIAGKGGNGAASFRREKFIPRGGPDGGDGGRGGSIYAVADRNINTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + +A++GE G ++ GA D+ L VPVGT +F+ + + DLD+ +R LA G Sbjct: 61 FARLHRARNGENGRGSDQYGAAAADITLRVPVGTTIFDAETGEQLFDLDRHNERATLAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN HFKSSTN+AP PG G+++ + L+LK++AD+G++GLPNAGKST ++ V+ Sbjct: 121 GHGGLGNLHFKSSTNRAPRQFTPGQEGEQRKLRLELKVLADVGLLGLPNAGKSTLISKVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL+PNLG+V+ F++ADIPG+I+ A +GAG+G FL+H RT V Sbjct: 181 NARPKIADYPFTTLHPNLGVVRTSPSHSFVIADIPGLIEGASEGAGLGHLFLRHLSRTRV 240 Query: 240 LLHIVSA---------LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTL 289 LLH+V +E+ Q A + I +EL Y+ +L K + L+++D V++ + + Sbjct: 241 LLHLVDVSSPDLSIDPVEQAAQDA-RAIAEELRLYDQDLYDKPRWLVLNKLDMVENPEDV 299 Query: 290 ARKKNELATQCGQVPFEFSSITGHG 314 ++ E G V F S++TG G Sbjct: 300 KQRLCEALGWTGPV-FGISALTGEG 323 >gi|317180109|dbj|BAJ57895.1| GTPase ObgE [Helicobacter pylori F32] Length = 360 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 154/330 (46%), Positives = 211/330 (63%), Gaps = 12/330 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG+G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGSGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF +D + L DL + +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCAGKKGEDKIIVVPPGTQVFVDDKLWL--DLVEPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A QG G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASQGKGLGISFLKHVERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELAT 298 ++ A L+ ++ YQ + EL ++ L K V L++ D V++ D +A+ Sbjct: 240 FVLDASRLDLGIKEQYQRLRLELEKFSPALANKPFGVLLNKCDVVENIDEMAKD------ 293 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFS 328 C + E + G+ L LH + S Sbjct: 294 FCAFLNLEAQKLEAFGLEPYLGFLHPHLTS 323 >gi|116515173|ref|YP_802802.1| Obg family GTP-binding protein [Buchnera aphidicola str. Cc (Cinara cedri)] gi|122285431|sp|Q057J0|OBG_BUCCC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|116257027|gb|ABJ90709.1| GTP-binding protein, Obg family [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 338 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 134/286 (46%), Positives = 192/286 (67%), Gaps = 2/286 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D + + +G GG G ISFRREKF+ GGPDGG+GG GG++WI + +N+NTL D+R Sbjct: 1 MKFVDSVIINVSAGKGGDGCISFRREKFVPKGGPDGGNGGDGGNIWIVSNTNINTLTDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ F++++G+ G+ NRSG G+D+ + VP+GT++ + D +I ++ + Q+ ++A G Sbjct: 61 IKKIFQSENGKNGLNSNRSGKNGKDIYIPVPLGTRIIDNDTKKIIIEILKINQKFLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN +FKSS NQ P G LG+ K I L+L LIADIG +GLPN+GKST + S++ Sbjct: 121 GKRGLGNTNFKSSINQTPRKKTYGTLGENKNILLELILIADIGTLGLPNSGKSTLITSMS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AK KI YPFTTL P LG VK K+FI+ADIPGIIKNA G G+G +FLKH R +L Sbjct: 181 NAKTKIDIYPFTTLIPILGTVKAKKKKFIIADIPGIIKNASLGIGLGIKFLKHLSRCKLL 240 Query: 241 LHIVSAL--EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LHI+ ++ + IL EL +N +L +K + ++ID + Sbjct: 241 LHIIDITINKKKINKIRYIILKELKNFNKKLFQKTRWLIFNKIDLL 286 >gi|318042362|ref|ZP_07974318.1| GTPase CgtA [Synechococcus sp. CB0101] Length = 329 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 138/320 (43%), Positives = 213/320 (66%), Gaps = 1/320 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ +R+G GG G ++FRREK++ GGP GG GGRGGDVW++A NL TL+DF+ Sbjct: 1 MQFIDQARIAVRAGRGGDGIVAFRREKYVPAGGPSGGDGGRGGDVWLEADPNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F+A G +G +GA G+ + + VP GT+V + L+ DL +G+++++A G Sbjct: 61 YKRLFEAVDGRRGGPNKSTGASGDGLTIKVPCGTEVRDLRTGILLGDLTDKGEKLLVAVG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S+ N+AP G G+E + L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GRGGLGNAHYLSNRNRAPEKCTEGRDGEEWNLQLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ + + ADIPG+I A QGAG+G FL+H +RT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRRPTGDGTVFADIPGLIAGAAQGAGLGHDFLRHIQRTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V A ++V Q + EL AY + L ++ +V L++ + + D L + + Sbjct: 241 LIHLVDASSDDVVRDLQVVEQELQAYGNGLEERPCLVALNKTELLLDDELKERVELASAH 300 Query: 300 CGQVPFEFSSITGHGIPQIL 319 CG+ S+ T + ++L Sbjct: 301 CGKPVLAISAATSANLDKLL 320 >gi|329667468|gb|AEB93416.1| Spo0B-associated GTP-binding protein [Lactobacillus johnsonii DPC 6026] Length = 428 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 138/323 (42%), Positives = 211/323 (65%), Gaps = 10/323 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EK++ GGP GG GGRGG + + A S L TL+DFR++ Sbjct: 2 FVDQTKIDVQAGKGGDGAVAFRHEKYVPLGGPAGGDGGRGGSIILVADSGLRTLMDFRFR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA +GE G +++ G +DV L VP+GT V++ + L+ DL + GQ +++A GG Sbjct: 62 RKFKADNGENGRIKSQYGRGAKDVRLKVPMGTSVYDFNTGELLGDLVENGQELVVAHGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + T AP A G G+ + + L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 122 GGRGNIHFATPTRTAPEIAENGEPGEFRTLRLELKVLADVGLVGFPSVGKSTLLSVVTKA 181 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+I+ A +G G+G +FL+H ERT V+ Sbjct: 182 KPKIAAYEFTTLTPNLGMVVLPDG-RDFSMADLPGLIEGASKGVGLGIQFLRHVERTKVI 240 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH+VS N + A Y+ I EL+ Y +L K EI+ +Q+D S+ K E Sbjct: 241 LHLVSMDPNNGRDAYEDYETIRKELAGYTKDLTTKKEIIVATQMDIPGSE---EKFAEFK 297 Query: 298 TQCG-QVPFEFSSITGHGIPQIL 319 + G + + SS+T G+ +++ Sbjct: 298 KKLGDKTVYPISSVTHKGVSELM 320 >gi|319956192|ref|YP_004167455.1| GTP-binding protein obg/cgta [Nitratifractor salsuginis DSM 16511] gi|319418596|gb|ADV45706.1| GTP-binding protein Obg/CgtA [Nitratifractor salsuginis DSM 16511] Length = 385 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 131/292 (44%), Positives = 187/292 (64%), Gaps = 2/292 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ + SG GGAG +SF EKF+ GGPDGG GGRGG VW Q N +TL R + Sbjct: 2 FVDNVELTLSSGKGGAGCVSFHTEKFVIKGGPDGGDGGRGGAVWFQVDGNTDTLSHLRGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G R R G G+D + VP GTQV + + L+ DL G+++ GG Sbjct: 62 RHIKAENGRPGEGRKRFGRSGKDTTVVVPPGTQVIDAETGELLLDLTTPGEKVKFLEGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSSTNQ P YA PG+ GQ + + L++KLIAD+G++G PN GKST ++ ++ A Sbjct: 122 GGLGNVHFKSSTNQRPTYAQPGLPGQTRRVRLEMKLIADVGLVGFPNVGKSTLISKLSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IA+Y FTTL P LG+V G + F++ADIPGII+ A G G+G FL+H ERT LL Sbjct: 182 RPEIANYEFTTLTPKLGVVALGEFDSFMMADIPGIIEGASDGRGLGLEFLRHIERTKTLL 241 Query: 242 HIVSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 ++ A ++ Y + +EL Y+ EL + V +++ID + + + +K Sbjct: 242 LMIDATNYREMKYQYDILKEELKNYSRELAGRPFAVAITKIDALSDNEIDQK 293 >gi|269468762|gb|EEZ80374.1| GTP1/Obg family GTP-binding protein [uncultured SUP05 cluster bacterium] Length = 335 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 137/341 (40%), Positives = 213/341 (62%), Gaps = 13/341 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D A + I +G GG+G + FRREK+I GGPDGG GG GG V+ + NLNTL +FR Sbjct: 1 MKFVDSASIRIEAGKGGSGCLGFRREKYIPDGGPDGGDGGDGGHVYFRGQENLNTLSEFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F+A++G+ G +N+ G E + + +P+GT+V++ + LI ++ Q Q +++A G Sbjct: 61 FNRLFRAKNGQPGSGQNKRGKSAEHLTVEMPLGTKVYDLETDELIGEITQHEQVLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSS N+AP PG G+ + I L+L ++ADIG++G+PNAGKS+ + ++ Sbjct: 121 GFHGLGNARFKSSINRAPRKTTPGTPGEAREIGLELSIMADIGLLGMPNAGKSSLIRQIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PK+ADYPFTTL+P+LG+V ++ADIPG+I++A +G G+G FLKH R L Sbjct: 181 SARPKVADYPFTTLHPSLGVVSLNDAHIVMADIPGLIEDASEGVGLGFEFLKHLSRAKAL 240 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSD----TLARKK 293 LH+V L + Y I EL+ Y+ EL K ++ ++++D + + T+ Sbjct: 241 LHVVDILPADASDPVQNYLTIEKELAKYDKELANKPRLLAINKMDLLTDEQKDKTVKSFL 300 Query: 294 NELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 N + Q G+V F S++ G G ++ L F + EN+ Sbjct: 301 NNIDYQ-GKV-FNISALNGLGCKDLVYGL----FELVKEND 335 >gi|322807309|emb|CBZ04883.1| GTP-binding protein Obg [Clostridium botulinum H04402 065] Length = 424 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 135/323 (41%), Positives = 204/323 (63%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK++++SG GG G ISFRREK+I FGGPDGG GG+GG+V + N+ TL+DF Y+ Sbjct: 2 FIDTAKIFVKSGKGGDGSISFRREKYIAFGGPDGGDGGKGGNVILVVDPNMTTLLDFTYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA+ G G G G+D+ + VP+GT V + + ++ DL + ++A GG Sbjct: 62 RKYKAEPGGNGAGSKCFGKNGKDLHIKVPMGTIVKDAETDKIMADLSKPEDSYVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + T QAP +A PG+ +E+ I L+LKL+AD+G+IG PN GKST L+ V++A Sbjct: 122 GGKGNCRFTTPTRQAPDFAEPGMPEEERWIKLELKLLADVGLIGFPNVGKSTLLSVVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V EG F++ADIPGII+ A +G G+G FL+H ERT VL+ Sbjct: 182 RPKIANYHFTTLKPNLGVVSIEGVNNFVIADIPGIIEGASEGVGLGLDFLRHVERTRVLI 241 Query: 242 HIVSALEENVQAAYQCIL---DELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H++ + Y L +EL Y+ +L + +I+ ++ D + D + K ++ Sbjct: 242 HVIDISSVEGRDPYDDFLKINEELKRYSVKLYDRPQIIAANKSDMLFDEEKFEEFKTKVE 301 Query: 298 TQCGQVPFEFSSITGHGIPQILE 320 F+ S+ T G+ +++ Sbjct: 302 KHGYNKVFKISAATKQGVDDLMK 324 >gi|42518996|ref|NP_964926.1| GTPase ObgE [Lactobacillus johnsonii NCC 533] gi|227889849|ref|ZP_04007654.1| GTP-binding protein [Lactobacillus johnsonii ATCC 33200] gi|81667897|sp|Q74JN7|OBG_LACJO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|41583283|gb|AAS08892.1| Spo0B-associated GTP-binding protein [Lactobacillus johnsonii NCC 533] gi|227849713|gb|EEJ59799.1| GTP-binding protein [Lactobacillus johnsonii ATCC 33200] Length = 428 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 138/323 (42%), Positives = 211/323 (65%), Gaps = 10/323 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EK++ GGP GG GGRGG + + A S L TL+DFR++ Sbjct: 2 FVDQTKIDVQAGKGGDGAVAFRHEKYVPLGGPAGGDGGRGGSIILVADSGLRTLMDFRFR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA +GE G +++ G +DV L VP+GT V++ + L+ DL + GQ +++A GG Sbjct: 62 RKFKADNGENGRIKSQYGRGAKDVRLKVPMGTSVYDFNTGELLGDLVENGQELVVAHGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + T AP A G G+ + + L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 122 GGRGNIHFATPTRTAPEIAENGEPGEFRTLRLELKVLADVGLVGFPSVGKSTLLSVVTKA 181 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+I+ A +G G+G +FL+H ERT V+ Sbjct: 182 KPKIAAYEFTTLTPNLGMVVLPDG-RDFSMADLPGLIEGASKGVGLGIQFLRHVERTKVI 240 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH+VS N + A Y+ I EL+ Y +L K EI+ +Q+D S+ K E Sbjct: 241 LHLVSMDPNNGRDAYEDYETIRKELAGYTKDLTTKKEIIVATQMDIPGSE---EKFAEFK 297 Query: 298 TQCG-QVPFEFSSITGHGIPQIL 319 + G + + SS+T G+ +++ Sbjct: 298 KKLGDKTVYPISSVTHKGVSELM 320 >gi|229198570|ref|ZP_04325272.1| Spo0B-associated GTP-binding protein [Bacillus cereus m1293] gi|228584852|gb|EEK42968.1| Spo0B-associated GTP-binding protein [Bacillus cereus m1293] Length = 428 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 137/322 (42%), Positives = 211/322 (65%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFVVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL GQ ++A GG Sbjct: 62 RHFKANRGQHGMSKGQHGRKAEDLIVKVPPGTVVKDEKTGQILADLVTHGQTAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F ++TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATATNPAPEIAENGEPGQERDVILELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE + Y I +EL YN L ++ ++V +++D D+ + L K ++ Sbjct: 242 HVIDMSGLEGRDPYEDYVTINNELKEYNLRLTERPQVVVANKMDMPDAEENLQAFKEKVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 302 DEVKIFP--ISAVTKQGVRDLL 321 >gi|148380937|ref|YP_001255478.1| Spo0B-associated GTP-binding protein [Clostridium botulinum A str. ATCC 3502] gi|153932136|ref|YP_001385306.1| GTPase ObgE [Clostridium botulinum A str. ATCC 19397] gi|153935501|ref|YP_001388714.1| GTPase ObgE [Clostridium botulinum A str. Hall] gi|261266733|sp|A7FXU6|OBG_CLOB1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266737|sp|A5I666|OBG_CLOBH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|148290421|emb|CAL84548.1| Spo0B-associated GTP-binding protein [Clostridium botulinum A str. ATCC 3502] gi|152928180|gb|ABS33680.1| GTPase, Obg family [Clostridium botulinum A str. ATCC 19397] gi|152931415|gb|ABS36914.1| GTPase, Obg family [Clostridium botulinum A str. Hall] Length = 424 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 135/323 (41%), Positives = 204/323 (63%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK++++SG GG G ISFRREK+I FGGPDGG GG+GG+V + N+ TL+DF Y+ Sbjct: 2 FIDTAKIFVKSGKGGDGSISFRREKYIAFGGPDGGDGGKGGNVVLVVDPNMTTLLDFTYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA+ G G G G+D+ + VP+GT V + + ++ DL + ++A GG Sbjct: 62 RKYKAEPGGNGAGSKCFGKNGKDLHIKVPMGTIVKDAETDKIMADLSKPEDSYVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + T QAP +A PG+ +E+ I L+LKL+AD+G+IG PN GKST L+ V++A Sbjct: 122 GGKGNCRFTTPTRQAPDFAEPGMPEEERWIKLELKLLADVGLIGFPNVGKSTLLSVVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V EG F++ADIPGII+ A +G G+G FL+H ERT VL+ Sbjct: 182 RPKIANYHFTTLKPNLGVVSIEGVNNFVIADIPGIIEGASEGVGLGLDFLRHVERTRVLI 241 Query: 242 HIVSALEENVQAAYQCIL---DELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H++ + Y L +EL Y+ +L + +I+ ++ D + D + K ++ Sbjct: 242 HVIDISSVEGRDPYDDFLKINEELKRYSVKLYDRPQIIAANKSDMLFDEEKFEEFKTKVE 301 Query: 298 TQCGQVPFEFSSITGHGIPQILE 320 F+ S+ T G+ +++ Sbjct: 302 KHGYNKVFKISAATKQGVDDLMK 324 >gi|157737842|ref|YP_001490526.1| GTP-binding protein [Arcobacter butzleri RM4018] gi|261266659|sp|A8EV83|OBG_ARCB4 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|157699696|gb|ABV67856.1| GTP-binding protein [Arcobacter butzleri RM4018] Length = 363 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 132/282 (46%), Positives = 189/282 (67%), Gaps = 2/282 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK + SG GG G SFRREKF+ GGPDGG GG+GG+V+ +N +TL ++ + Sbjct: 2 FIDSAKFTVISGKGGQGCASFRREKFVVQGGPDGGDGGKGGNVYFLVDNNTDTLSSYKGR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++G++GM N +G G+ +VL VP GTQV +++ ++ DL + G++I+ GG Sbjct: 62 KLFKAENGKQGMGGNMTGKSGDSLVLVVPPGTQVIDDETNEVLFDLLENGEKILFLEGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+S NQ P Y PG+ G K I L+LKLIAD+G++G PN GKST ++ + A Sbjct: 122 GGLGNVHFKNSRNQRPTYFQPGLPGSTKNIRLELKLIADVGLVGYPNVGKSTLISVTSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 P+IA+Y FTTL P LG+V+ G Y F++ADIPGII A G G+G FLKH ERT LL Sbjct: 182 TPEIANYEFTTLTPKLGVVEVGNYNSFVMADIPGIIDGASDGKGLGLEFLKHIERTKTLL 241 Query: 242 HIVS-ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 ++ A + YQ + +E++ +++EL K+ + LS+ID Sbjct: 242 FVIDVANYRTMIDQYQVLKEEVAKFSNELSKRNYAIALSKID 283 >gi|304383421|ref|ZP_07365886.1| obg family GTPase CgtA [Prevotella marshii DSM 16973] gi|304335435|gb|EFM01700.1| obg family GTPase CgtA [Prevotella marshii DSM 16973] Length = 387 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 140/328 (42%), Positives = 210/328 (64%), Gaps = 5/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ RSG GG G + R K+ GGPDGG GG GG ++++ N TL+ +YQ Sbjct: 6 FVDYVKICCRSGKGGKGSMHLRHVKYQPNGGPDGGDGGHGGSIYLRGNHNYWTLLHLKYQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G + G G+D+ + VP GT V+ + +CD+ +GQ ++L GG Sbjct: 66 RHIFAEHGGNGGRDKCHGTDGKDLYIDVPCGTVVYNAETGKYVCDVAYDGQEVLLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F+S+TNQAP YA PG +E I L+LKL+AD+G++G PNAGKST L+SV+ A Sbjct: 126 GGLGNFQFRSATNQAPRYAQPGEPMEEMTIILELKLLADVGLVGFPNAGKSTLLSSVSSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+YPFTTL P+LGIV+ ++ F++ADIPGII+ A QG G+G RFL+H ER +LL Sbjct: 186 RPKIANYPFTTLEPSLGIVEYRDHQSFVMADIPGIIEGASQGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V ++++ Y+ +LDEL +N EL K ++ +++ D +D + + + T Sbjct: 246 FMVPGDTDDIRREYEVLLDELRNFNPELLDKHRVLAVTKCDLLDEELIEMLRE---TTPD 302 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFS 328 +P F S++TG GI ++ + L ++ S Sbjct: 303 DLPVVFISAVTGQGIAELKDTLWRELNS 330 >gi|115473975|ref|NP_001060586.1| Os07g0669200 [Oryza sativa Japonica Group] gi|113612122|dbj|BAF22500.1| Os07g0669200 [Oryza sativa Japonica Group] gi|125559543|gb|EAZ05079.1| hypothetical protein OsI_27269 [Oryza sativa Indica Group] Length = 752 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 139/320 (43%), Positives = 203/320 (63%), Gaps = 1/320 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+ D AK+Y ++GDGG G ++FRREK++ GGP GG GGRGG+V+++ ++N+L+ FR Sbjct: 294 MRCFDTAKIYAKAGDGGNGVVAFRREKYVPLGGPSGGDGGRGGNVFVEVDGDMNSLLPFR 353 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 HF+A G G R ++GAKG+DVV+ VP GT V G + +L + GQR +L PG Sbjct: 354 KSVHFRAGRGAHGQGRQQAGAKGDDVVVKVPPGTVVRSAAGDVELLELMRPGQRALLLPG 413 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FKS TN+AP A G G E I L+LKL+AD+GI+G PNAGKST L +++ Sbjct: 414 GRGGRGNAAFKSGTNKAPRIAEKGEKGPEMWIDLELKLVADVGIVGAPNAGKSTLLTAIS 473 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKP IA+YPFTTL PNLG+V + ++AD+PG+++ AH+G G+G FL+H+ER V Sbjct: 474 AAKPTIANYPFTTLLPNLGVVSLDFDATMVVADLPGLLEGAHRGYGLGHEFLRHSERCSV 533 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V E + ++ + EL ++ L K IV +++D ++ K E Sbjct: 534 LVHVVDGSGEQPEYEFEAVRLELELFSPSLVDKPYIVVYNKMDLPEASERWNKFQEKLQA 593 Query: 300 CGQVPFEFSSITGHGIPQIL 319 G P+ S++ G ++ Sbjct: 594 EGIEPYCISAMNRQGTEDVV 613 >gi|317056983|ref|YP_004105450.1| GTP-binding protein Obg/CgtA [Ruminococcus albus 7] gi|315449252|gb|ADU22816.1| GTP-binding protein Obg/CgtA [Ruminococcus albus 7] Length = 425 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 135/329 (41%), Positives = 217/329 (65%), Gaps = 8/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK+YI++GDGG G +SF REK++ GGPDGG GG+GGD+ + N++ LIDFRY+ Sbjct: 2 FVDQAKIYIKAGDGGDGAVSFHREKYVAAGGPDGGDGGKGGDIIFKVDDNISNLIDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ G+ G +N G +D+V+ VP GT + + D ++ D+ + + + +A GG Sbjct: 62 KKYVAEKGQNGGAKNSYGRSAQDLVIKVPRGTVIRDADTGRILADMSAD-EPVCVAHGGK 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHF +ST Q P +A PG G+E I L+LKL+AD+G++G PN GKST ++ V+ A Sbjct: 121 GGRGNAHFATSTRQIPRFAKPGFRGEEFNITLELKLLADVGLVGFPNVGKSTLISVVSAA 180 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL P LG+VK G + F++ADIPG+I+ A +G G+G FL+H ER +++ Sbjct: 181 KPKIANYHFTTLVPVLGVVKVGEERSFVMADIPGLIEGASEGVGLGHEFLRHVERCRLIV 240 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+ VS +E + ++ I EL+ ++ +L +IV ++ D + +AR K + Sbjct: 241 HVVDVSGIEGRDPIEDFEAINKELANFSEDLAAAPQIVAANKTDMATPEQIARFKEYI-- 298 Query: 299 QCGQVP-FEFSSITGHGIPQILECLHDKI 326 + ++P +E S+ T G +++ +++K+ Sbjct: 299 EKLELPYYEISAATTKGTQELIYGINEKL 327 >gi|300361555|ref|ZP_07057732.1| obg family GTPase CgtA [Lactobacillus gasseri JV-V03] gi|300354174|gb|EFJ70045.1| obg family GTPase CgtA [Lactobacillus gasseri JV-V03] Length = 428 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 138/323 (42%), Positives = 212/323 (65%), Gaps = 10/323 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FR EK++ GGP GG GGRGG + + A S L TL+DFR++ Sbjct: 2 FVDQTKIDVQAGKGGDGAVAFRHEKYVPLGGPAGGDGGRGGSIILVADSGLRTLMDFRFR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA +GE G +++ G +DV L VP+GT V++ + L+ DL + GQ +++A GG Sbjct: 62 RKFKADNGENGRIKSQYGRGAKDVRLKVPMGTSVYDFNTGELLGDLVKNGQELVVAHGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + T AP A G G+ + + L+LK++AD+G++G P+ GKST L+ VT+A Sbjct: 122 GGRGNIHFATPTRIAPEIAENGEPGEFRTLRLELKVLADVGLVGFPSVGKSTLLSVVTKA 181 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+V +G ++F +AD+PG+I+ A +G G+G +FL+H ERT V+ Sbjct: 182 KPKIAAYEFTTLTPNLGMVVLPDG-RDFSMADLPGLIEGASKGVGLGIQFLRHVERTKVI 240 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 LH+VS N + A Y+ I EL+ Y +L K E++ +Q+D S + LA K +L Sbjct: 241 LHLVSMDPNNGRDAYEDYETIRKELAGYTKDLTSKKELIVATQMDIPGSEEKLAEFKKKL 300 Query: 297 ATQCGQVPFEFSSITGHGIPQIL 319 + + SS+T G+ +++ Sbjct: 301 GDKT---VYPISSVTHQGVSELM 320 >gi|315637631|ref|ZP_07892837.1| GTP1/Obg family GTP-binding protein [Arcobacter butzleri JV22] gi|315478085|gb|EFU68812.1| GTP1/Obg family GTP-binding protein [Arcobacter butzleri JV22] Length = 363 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 132/282 (46%), Positives = 189/282 (67%), Gaps = 2/282 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK + SG GG G SFRREKF+ GGPDGG GG+GG+V+ +N +TL ++ + Sbjct: 2 FIDSAKFTVISGKGGQGCASFRREKFVVQGGPDGGDGGKGGNVYFLVDNNTDTLSSYKGR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++G++GM N +G G+ +VL VP GTQV +++ ++ DL + G++I+ GG Sbjct: 62 KLFKAENGKQGMGGNMTGKSGDSLVLVVPPGTQVIDDETNEVLFDLLENGEKILFLEGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+S NQ P Y PG+ G K I L+LKLIAD+G++G PN GKST ++ + A Sbjct: 122 GGLGNVHFKNSRNQRPTYFQPGLPGSTKNIRLELKLIADVGLVGYPNVGKSTLISVTSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 P+IA+Y FTTL P LG+V+ G Y F++ADIPGII A G G+G FLKH ERT LL Sbjct: 182 TPEIANYEFTTLTPKLGVVEVGNYNSFVMADIPGIIDGASDGKGLGLEFLKHIERTKTLL 241 Query: 242 HIVS-ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 ++ A + YQ + +E++ +++EL K+ + LS+ID Sbjct: 242 FVIDVANYRTMIDQYQVLKEEVAKFSNELSKRNYAIALSKID 283 >gi|282880165|ref|ZP_06288885.1| Obg family GTPase CgtA [Prevotella timonensis CRIS 5C-B1] gi|281306038|gb|EFA98078.1| Obg family GTPase CgtA [Prevotella timonensis CRIS 5C-B1] Length = 388 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 136/328 (41%), Positives = 211/328 (64%), Gaps = 5/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + R K+ GGPDGG GG+GG ++++ N TL+ RY Sbjct: 5 FVDYVKIYCRSGKGGRGSMHLRHVKYNYNGGPDGGDGGKGGSIYLRGNHNYWTLLHLRYD 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G K G G+D+ + VP GT V+ + ICD+ + GQ ++L GG Sbjct: 65 RHIFAEHGGNGGKDKCHGTDGKDIYIDVPCGTVVYNAENGKFICDVTEHGQEVLLLKGGR 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F+++TNQAP YA PG QE + L+LKL+AD+G++G PNAGKST ++S++ A Sbjct: 125 GGLGNFQFRTATNQAPRYAQPGEPMQEMTVILELKLLADVGLVGFPNAGKSTLVSSLSSA 184 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+YPFTTL P+LGIV+ + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 185 RPKIANYPFTTLEPSLGIVEYRDHHSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 244 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V ++++ Y+ +L+EL +N ++ K ++ +++ D +D + + + L T Sbjct: 245 FMVPGDTDDIKKEYEILLNELRTFNPDMMDKHRVLAVTKCDLLDQELIEMLHDTLPT--- 301 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFS 328 +P F S++TG G+ ++ + L ++ S Sbjct: 302 DLPVVFISAVTGQGLDELKDVLWKELNS 329 >gi|326797519|ref|YP_004315338.1| GTPase obg [Sphingobacterium sp. 21] gi|326548283|gb|ADZ76668.1| GTPase obg [Sphingobacterium sp. 21] Length = 332 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 140/329 (42%), Positives = 204/329 (62%), Gaps = 6/329 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ RSG GGAG R+K GGPDGG GGRGG + ++ S L TL+ +Y+ Sbjct: 7 FVDYVKICCRSGHGGAGSAHLHRDKHTAKGGPDGGDGGRGGHIILRGNSQLWTLLHLKYR 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+ G G + G G+D +L VP+GT + ++ D+ ++G+ +L PGG Sbjct: 67 KHIIAEPGGPGSSALQHGKNGKDEILEVPLGTIARNAETGEVLFDITEDGETKVLTPGGR 126 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+ T Q P +A PG G E+ I L+LK++AD+G++G PNAGKST L+ V+ A Sbjct: 127 GGLGNWHFKTPTQQTPRFAQPGEPGIEEWIVLELKVLADVGLVGFPNAGKSTLLSVVSAA 186 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IADYPFTTL PNLGIV K F++ADIPGII+ A +G G+G RFL+H ER VLL Sbjct: 187 KPEIADYPFTTLVPNLGIVSYRDNKSFVMADIPGIIEGASEGKGLGYRFLRHIERNSVLL 246 Query: 242 HIVSA-LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +V A ++ + +L EL+AYN EL K ++ +++ D +D + + +L Sbjct: 247 FMVPADTHRSIAEEFNILLHELTAYNPELLDKPRLLAITKSDMLDEELQLEMEQDLPE-- 304 Query: 301 GQVPFEF-SSITGHGIPQILECLHDKIFS 328 Q+P+ F SS+ G+ ++ + + I S Sbjct: 305 -QIPYIFISSVAQKGLQELKDLIWKAINS 332 >gi|261405394|ref|YP_003241635.1| GTP-binding protein Obg/CgtA [Paenibacillus sp. Y412MC10] gi|329928491|ref|ZP_08282359.1| Obg family GTPase CgtA [Paenibacillus sp. HGF5] gi|261281857|gb|ACX63828.1| GTP-binding protein Obg/CgtA [Paenibacillus sp. Y412MC10] gi|328937750|gb|EGG34158.1| Obg family GTPase CgtA [Paenibacillus sp. HGF5] Length = 436 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 141/338 (41%), Positives = 217/338 (64%), Gaps = 10/338 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AKVY++ GDGG G I+FRREK++ GGP GG GG+GGDV + L TL+DFRYQ Sbjct: 2 FVDKAKVYVKGGDGGDGLIAFRREKYVPEGGPAGGDGGKGGDVIFRVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GEKG +++ GA E +++ +P GT + ++D +I DL + GQ++++A GG Sbjct: 62 KHFKAKRGEKGRNKSQHGANAESMIVRIPPGTILTDDDTGEVIGDLTRHGQQVVVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + ++LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPNNPAPELAENGEEGEERYVTMELKVMADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH+G G+G FL+H ERT V++ Sbjct: 182 QPKIGAYHFTTITPNLGMVEVGDGRNFVMADLPGLIEGAHEGVGLGHEFLRHVERTRVII 241 Query: 242 HIVSALEENVQAAY---QCILDELSAYNSELRKKIEIVGLSQIDTVDSD----TLARKKN 294 H+V + + Q I DE+ YN L ++ +IV +++D +++ K Sbjct: 242 HVVDMAGTEGRDPFEDWQKINDEIRLYNPVLIERPQIVAANKMDMPEAEEYLAAFKEKVK 301 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 E+ +P SS+T GI ++L D + SI E Sbjct: 302 EIRPDIEVMP--ISSLTRQGIQELLYRTIDVLESIPDE 337 >gi|34395197|dbj|BAC83597.1| putative GTP-binding protein [Oryza sativa Japonica Group] Length = 459 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 139/320 (43%), Positives = 203/320 (63%), Gaps = 1/320 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+ D AK+Y ++GDGG G ++FRREK++ GGP GG GGRGG+V+++ ++N+L+ FR Sbjct: 1 MRCFDTAKIYAKAGDGGNGVVAFRREKYVPLGGPSGGDGGRGGNVFVEVDGDMNSLLPFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 HF+A G G R ++GAKG+DVV+ VP GT V G + +L + GQR +L PG Sbjct: 61 KSVHFRAGRGAHGQGRQQAGAKGDDVVVKVPPGTVVRSAAGDVELLELMRPGQRALLLPG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FKS TN+AP A G G E I L+LKL+AD+GI+G PNAGKST L +++ Sbjct: 121 GRGGRGNAAFKSGTNKAPRIAEKGEKGPEMWIDLELKLVADVGIVGAPNAGKSTLLTAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKP IA+YPFTTL PNLG+V + ++AD+PG+++ AH+G G+G FL+H+ER V Sbjct: 181 AAKPTIANYPFTTLLPNLGVVSLDFDATMVVADLPGLLEGAHRGYGLGHEFLRHSERCSV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V E + ++ + EL ++ L K IV +++D ++ K E Sbjct: 241 LVHVVDGSGEQPEYEFEAVRLELELFSPSLVDKPYIVVYNKMDLPEASERWNKFQEKLQA 300 Query: 300 CGQVPFEFSSITGHGIPQIL 319 G P+ S++ G ++ Sbjct: 301 EGIEPYCISAMNRQGTEDVV 320 >gi|300933224|ref|ZP_07148480.1| GTPase ObgE [Corynebacterium resistens DSM 45100] Length = 503 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 137/345 (39%), Positives = 215/345 (62%), Gaps = 14/345 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++++GDGG G S RREKF+ GGPDGG+GG GGD+ ++ + ++TL+DF + Sbjct: 3 QFVDRVVLHLQAGDGGHGCNSVRREKFLPLGGPDGGNGGHGGDIILEVSDQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H KA G G NR GA+G+D++L VP GT V ++DG ++ DL +G ++I+A GG Sbjct: 63 RPHIKATRGNNGAGDNRHGARGDDLILPVPEGTVVIDQDG-EVLADLMGKGTQMIVANGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 +GG GNA S + +AP +A G G+ K I L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 HGGLGNAALASKSRKAPGFALLGEPGEIKDITLELKSMADVGLVGFPSAGKSSLISVMSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A+PKI DYPFTTL PNLG+V G++ F +AD+PG+I A QG G+G FL+H ERT VL Sbjct: 182 ARPKIGDYPFTTLAPNLGVVNVGHEAFTIADVPGLIPGASQGKGLGLDFLRHIERTAVLA 241 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSE---------LRKKIEIVGLSQIDTVDSDT 288 H+V A E N + + EL+ Y E LR++ ++ L+++D D+ Sbjct: 242 HVVDAASLESERNPVDDIRALEKELATYQEELKTDSGLGDLRERPRVIILNKMDVPDAGE 301 Query: 289 LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 +A + + G F S++ G+ ++ L + + R E+ Sbjct: 302 MADLQEDELKAFGWPIFRISTVARTGLKELTYALAEIVEKHRAEH 346 >gi|261250201|ref|ZP_05942777.1| GTP-binding protein Obg [Vibrio orientalis CIP 102891] gi|260939317|gb|EEX95303.1| GTP-binding protein Obg [Vibrio orientalis CIP 102891] Length = 391 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 140/287 (48%), Positives = 200/287 (69%), Gaps = 6/287 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA V +++GDGG G +SF REKF+ GGPDGG GG GGD++IQA NLNTLID+R Sbjct: 1 MKFVDEAVVKVQAGDGGNGVVSFWREKFVAKGGPDGGDGGDGGDIYIQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ GE G N +G +G+D VL VPVGT+ + ++ ++ + G+++++A G Sbjct: 61 FQRFYEAERGENGRGGNCTGKRGKDKVLRVPVGTRAVDIHTNEIVAEVAEHGKKVMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + I L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTLGTKGEIREIRLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 LLH++ + + V+ A I+DEL Y+ +L K + +++D Sbjct: 241 LLHMIDIMPIDQTDPVENAL-TIIDELEQYSEKLANKPRWLIFNKVD 286 >gi|222097887|ref|YP_002531944.1| gtpase obge [Bacillus cereus Q1] gi|261266674|sp|B9IZ16|OBG_BACCQ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|221241945|gb|ACM14655.1| spo0B-associated GTP-binding protein [Bacillus cereus Q1] gi|324328344|gb|ADY23604.1| GTPase CgtA [Bacillus thuringiensis serovar finitimus YBT-020] Length = 428 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 137/322 (42%), Positives = 211/322 (65%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFVVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL GQ ++A GG Sbjct: 62 RHFKADRGQHGMSKGQHGRKSEDLIVKVPPGTVVKDEKTGQILADLVTHGQTAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F ++TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATATNPAPEIAENGEPGQERDVILELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE + Y I +EL YN L ++ ++V +++D D+ + L K ++ Sbjct: 242 HVIDMSGLEGRDPYEDYVTINNELKEYNLRLTERPQVVVANKMDMPDAEENLQAFKEKVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 302 DEVKIFP--ISAVTKQGVRDLL 321 >gi|320540165|ref|ZP_08039820.1| GTPase involved in cell partioning and DNA repair [Serratia symbiotica str. Tucson] gi|320029831|gb|EFW11855.1| GTPase involved in cell partioning and DNA repair [Serratia symbiotica str. Tucson] Length = 384 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 134/305 (43%), Positives = 205/305 (67%), Gaps = 4/305 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + + +G+GG G +SFRREK+I GGPDGG+GG GGDV++ A NLNTLID R Sbjct: 1 MKFVDEVAILVVAGNGGNGCVSFRREKYIPNGGPDGGAGGDGGDVYLLADENLNTLIDHR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F+A+ G+ G + +G +G+D+++ VPVGT+V ++ ++ D+ + Q++++A G Sbjct: 61 FVKAFRAERGQNGQSSDCTGKRGKDIIIKVPVGTRVKDQGTGEILGDMTRHEQKLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + I L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTLGTTGEARDILLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ +++ F++ADIPG+I A G G+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDHEQSFVIADIPGLIGGASDGVGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH+V E + + I++EL+ Y+ L +K + +++D +D + + + Sbjct: 241 LLHLVDIAPIDESDPVENAKIIINELNQYSENLAQKRRWLVFNKVDLLDEEEAVERAKAI 300 Query: 297 ATQCG 301 G Sbjct: 301 VAGMG 305 >gi|312883916|ref|ZP_07743633.1| GTPase ObgE [Vibrio caribbenthicus ATCC BAA-2122] gi|309368374|gb|EFP95909.1| GTPase ObgE [Vibrio caribbenthicus ATCC BAA-2122] Length = 390 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 145/340 (42%), Positives = 216/340 (63%), Gaps = 6/340 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA V +++GDGG G +SF REKF+ GGPDGG GG GGD++IQA NLNTLID+R Sbjct: 1 MKFVDEAVVKVQAGDGGNGVVSFWREKFVAKGGPDGGDGGDGGDIYIQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ GE G N +G +G+D VL VPVGT+ + ++ ++ + +++++A G Sbjct: 61 FQRFYEAERGENGRGGNCTGKRGKDKVLRVPVGTRAVDIHTNEIVAEVAEHNKKVMIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + I L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKTLGTKGEVREIRLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLH++ + + + + I+DEL Y+ +L K + ++ D + + + Sbjct: 241 LLHMIDIMPIDQSDPISNALTIIDELEQYSEKLASKPRWLIFNKADLMPEEEANEIIQNI 300 Query: 297 ATQCGQVP--FEFSSITGHGIPQILECLHDKIFSIRGENE 334 G F+ S++ G ++ L D + S+ E + Sbjct: 301 LDALGWEDQYFKISAVNRDGTKELCYKLADFMESLPKEEQ 340 >gi|118474188|ref|YP_892670.1| GTPase ObgE [Campylobacter fetus subsp. fetus 82-40] gi|261266710|sp|A0RR37|OBG_CAMFF RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|118413414|gb|ABK81834.1| GTP-binding protein Obg/CgtA [Campylobacter fetus subsp. fetus 82-40] Length = 344 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 141/331 (42%), Positives = 209/331 (63%), Gaps = 15/331 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A + SG GG G SFRREK + GGPDGG GG GGDV+ +N +TL +++ + Sbjct: 2 FVDSASFSVSSGKGGPGCASFRREKHVPLGGPDGGDGGNGGDVYFIVDNNTHTLANYKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KA +G G+ RN +G KG+++ L VP GT V++ D L+ DL EGQ+ + GG Sbjct: 62 RAMKAANGVPGLPRNMTGKKGDNLELIVPPGTAVYDADSNELLLDLISEGQKELFLSGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+S NQAP A PG+ G+ + I L+LKLIAD+G++G PN GKST ++S++ A Sbjct: 122 GGLGNVHFKTSVNQAPTKAQPGLPGETRNIRLELKLIADVGLVGFPNVGKSTLISSISNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+V+ + + FI+ADIPGII+ A G G+G +FLKH ERT VLL Sbjct: 182 KPQIANYEFTTLTPKLGLVEVDEFSGFIMADIPGIIEGASDGKGLGIQFLKHIERTKVLL 241 Query: 242 HIVS-ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID-TVDSDTLAR-------- 291 +++ A +++ ++ + E+ ++ L K+ + L+++D VD+D Sbjct: 242 YMIDLANYRSLKEQFETLKSEVLKFSPNLAKRDFAIALTRLDAAVDADEKIEEFLNEFKF 301 Query: 292 -KKNELATQCGQVPF---EFSSITGHGIPQI 318 KK ++ Q PF SS+ G G+ ++ Sbjct: 302 DKKQDIYEYDRQKPFFVLPISSVAGDGLKEL 332 >gi|206976026|ref|ZP_03236936.1| spo0B-associated GTP-binding protein [Bacillus cereus H3081.97] gi|217961930|ref|YP_002340500.1| GTPase ObgE [Bacillus cereus AH187] gi|229141179|ref|ZP_04269718.1| Spo0B-associated GTP-binding protein [Bacillus cereus BDRD-ST26] gi|261266673|sp|B7HQJ8|OBG_BACC7 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|206745778|gb|EDZ57175.1| spo0B-associated GTP-binding protein [Bacillus cereus H3081.97] gi|217065210|gb|ACJ79460.1| spo0B-associated GTP-binding protein [Bacillus cereus AH187] gi|228642220|gb|EEK98512.1| Spo0B-associated GTP-binding protein [Bacillus cereus BDRD-ST26] Length = 428 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 137/322 (42%), Positives = 211/322 (65%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFVVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL GQ ++A GG Sbjct: 62 RHFKADRGQHGMSKGQHGRKSEDLIVKVPPGTVVKDEKTGQILADLVTHGQTAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F ++TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATATNPAPEIAENGEPGQERDVILELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE + Y I +EL YN L ++ ++V +++D D+ + L K ++ Sbjct: 242 HVIDMSGLEGRDPYEDYVTINNELKEYNLRLTERPQVVVANKMDMPDAEENLQAFKEKVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 302 DEVKIFP--ISAVTRQGVRDLL 321 >gi|184155102|ref|YP_001843442.1| GTP-binding protein [Lactobacillus fermentum IFO 3956] gi|261266842|sp|B2GBD0|OBG_LACF3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|183226446|dbj|BAG26962.1| GTP-binding protein [Lactobacillus fermentum IFO 3956] Length = 435 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 135/328 (41%), Positives = 209/328 (63%), Gaps = 9/328 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ + +G GG G ++FRREK++ GGP GG GGRGG + ++ L TL+DFRY Sbjct: 4 FVDQIKIEVHAGHGGNGMVAFRREKYVPNGGPAGGDGGRGGSIILKVDEGLRTLMDFRYH 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++G+ GM + +GA +D V+ VP GT V + D ++ DL ++GQ +++A GG Sbjct: 64 RIFKAKNGQNGMSKQMTGAAADDTVIAVPQGTTVRDLDTGQIVGDLVEQGQELVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S N AP A G G++ + L+LK++AD+G+IG P+ GKST L+ VT A Sbjct: 124 GGRGNIHFASPKNPAPEIAENGEPGEDHYLELELKMLADVGLIGFPSVGKSTLLSVVTGA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V ++F +AD+PG+I A +G G+G +FL+H ERT VLL Sbjct: 184 KPKIAAYEFTTLVPNLGMVMLPDGRDFAMADMPGLINGASKGVGLGLQFLRHIERTRVLL 243 Query: 242 HIVSALEENVQAAYQCILD---ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V ++ + A + D EL++Y+ EL K+ +IV +++D ++ + +L Sbjct: 244 HLVDLGNQDAELALEKFHDINKELASYDPELLKRPQIVVATKMDLPEAQEHLDEFKKLLE 303 Query: 299 QCGQVP-----FEFSSITGHGIPQILEC 321 +P F S++T G+ ++++ Sbjct: 304 ADDTLPETPQVFSISAVTHAGVQELMQT 331 >gi|225418737|ref|ZP_03761926.1| hypothetical protein CLOSTASPAR_05961 [Clostridium asparagiforme DSM 15981] gi|225041745|gb|EEG51991.1| hypothetical protein CLOSTASPAR_05961 [Clostridium asparagiforme DSM 15981] Length = 429 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 147/326 (45%), Positives = 209/326 (64%), Gaps = 10/326 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK++I+SG GG G +SFRRE ++ GGPDGG GG+GGD+ Q LNTL+DFR+ Sbjct: 2 FADSAKIFIKSGKGGDGHVSFRRELYVPAGGPDGGDGGKGGDIIFQVDEGLNTLMDFRHV 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + AQ GE+G KR GA G D+V+ VP GT + + + +I D+ E +R ++ GG Sbjct: 62 RKYVAQSGEEGGKRRCHGANGSDLVIKVPEGTVIKDFESGKVIADMSGENRRKVILKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+ +ST QAP YA PG QE + L+LK+IAD+G++G PN GKST L+ V+ A Sbjct: 122 GGLGNMHYATSTMQAPKYAQPGQPSQELWVKLELKVIADVGLVGFPNVGKSTLLSVVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IA+Y FTTL P+LG+V G F++ADIPG+I+ A +G G+G FLKH ERT VL+ Sbjct: 182 RPQIANYHFTTLNPHLGVVDLGDGAGFVMADIPGLIEGASEGVGLGHAFLKHIERTKVLI 241 Query: 242 HIV---SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-----TLARKK 293 H+V S + + IL EL AYN EL K+ +++ +++D V D L R + Sbjct: 242 HVVDGASVEGRDPVEDIKTILKELEAYNPELVKRPQVIAANKMDAVYGDEGEDGILKRLR 301 Query: 294 NELATQCGQVPFEFSSITGHGIPQIL 319 E G F S+++G G+ ++L Sbjct: 302 QEFEP-LGMKVFALSAVSGKGVKELL 326 >gi|24158881|pdb|1LNZ|A Chain A, Structure Of The Obg Gtp-Binding Protein gi|24158882|pdb|1LNZ|B Chain B, Structure Of The Obg Gtp-Binding Protein Length = 342 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 143/322 (44%), Positives = 209/322 (64%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KVY++ GDGG G ++FRREK++ GGP GG GG+GGDV + L TL DFRY+ Sbjct: 2 FVDQVKVYVKGGDGGNGXVAFRREKYVPKGGPAGGDGGKGGDVVFEVDEGLRTLXDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE G +N+ G +D V+ VP GT V ++D +I DL + GQR ++A GG Sbjct: 62 KHFKAIRGEHGXSKNQHGRNADDXVIKVPPGTVVTDDDTKQVIADLTEHGQRAVIARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP + G G+E+ I L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATPANPAPQLSENGEPGKERYIVLELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG V+ + + F+ AD+PG+I+ AHQG G+G +FL+H ERT V++ Sbjct: 182 KPKIADYHFTTLVPNLGXVETDDGRSFVXADLPGLIEGAHQGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 H++ S LE + Y I ELS YN L ++ +I+ ++ D + ++ L K +L Sbjct: 242 HVIDXSGLEGRDPYDDYLTINQELSEYNLRLTERPQIIVANKXDXPEAAENLEAFKEKLT 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 P S++T G+ ++L Sbjct: 302 DDYPVFP--ISAVTREGLRELL 321 >gi|46199724|ref|YP_005391.1| GTPase ObgE [Thermus thermophilus HB27] gi|81830568|sp|Q72HR4|OBG_THET2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|46197350|gb|AAS81764.1| GTP-binding protein [Thermus thermophilus HB27] Length = 416 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 143/327 (43%), Positives = 216/327 (66%), Gaps = 4/327 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + +G GG G +SFRREKF+ GGPDGG GGRGG V+++A ++++L + Sbjct: 2 FQDVLVITVAAGRGGDGAVSFRREKFVPKGGPDGGDGGRGGSVYLRARGSVDSLSRL-SK 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA+ GE G + G GED+V+ VP GT+VF+ D L+ DL +EGQ +++A GG Sbjct: 61 RTYKAEDGEHGRGSQQHGRGGEDLVIEVPRGTRVFDADTGELLADLTEEGQTVLVARGGA 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + T QAP +A G G+++ + L+L LIAD+G++G PNAGKS+ LA++TRA Sbjct: 121 GGRGNMHFVTPTRQAPRFAEAGEEGEKRRLRLELMLIADVGLVGYPNAGKSSLLAAMTRA 180 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 PKIA YPFTTL PNLG+V+ +E F LADIPGII+ A +G G+G FL+H RT VLL Sbjct: 181 HPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGASEGKGLGLEFLRHIARTRVLL 240 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +++ A +E ++ + + E+ AY+ L ++ +V L+++D ++ + + + LA + G Sbjct: 241 YVLDAADEPLK-TLETLRKEVGAYDPALLRRPSLVALNKVDLLEEEAVKALADALARE-G 298 Query: 302 QVPFEFSSITGHGIPQILECLHDKIFS 328 S++TG G+P + E LH + S Sbjct: 299 LAVLPVSALTGVGLPALKEALHALVRS 325 >gi|291613475|ref|YP_003523632.1| GTP-binding protein Obg/CgtA [Sideroxydans lithotrophicus ES-1] gi|291583587|gb|ADE11245.1| GTP-binding protein Obg/CgtA [Sideroxydans lithotrophicus ES-1] Length = 360 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 146/342 (42%), Positives = 222/342 (64%), Gaps = 9/342 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE+K+ + +G+GG G SFR EK+IE GGPDGG GGRGG V A N+NTL+D+R Sbjct: 1 MKFIDESKIEVIAGNGGNGAASFRHEKYIEKGGPDGGDGGRGGSVIAVADRNINTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + +A++GE G + G +D++L +PVGT + + + +I DL +G+R++LA G Sbjct: 61 FARMHRARNGEPGRGADCYGKGADDIILRMPVGTVITDINSGQVIADLTHDGERVLLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+ P PG G+ + L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GAGGLGNLHFKSSTNRTPRQCTPGEEGERHELQLELKVLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL+PNLG+V+ K F++ADIPG+I+ A +GAG+G +FL+H RT + Sbjct: 181 AARPKVADYPFTTLHPNLGVVRVSDEKSFVIADIPGLIEGAAEGAGLGHQFLRHLARTRL 240 Query: 240 LLHIVSALE-----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 LLH+V + VQ A+ IL+EL Y+ +L K + L+++D + + A + Sbjct: 241 LLHLVDLAPLYEGIDPVQEAH-AILNELRKYDEDLYNKPRWLVLNKLDLLQEEDRAERIA 299 Query: 295 ELATQCGQVP--FEFSSITGHGIPQILECLHDKIFSIRGENE 334 G+ F S+I G G ++ + + I I + + Sbjct: 300 AFLKAFGENTRYFAISAINGEGCKELTYAIMEHINQIAAQEQ 341 >gi|170754927|ref|YP_001782619.1| GTPase ObgE [Clostridium botulinum B1 str. Okra] gi|261266738|sp|B1ILY5|OBG_CLOBK RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|169120139|gb|ACA43975.1| GTPase, Obg family [Clostridium botulinum B1 str. Okra] Length = 424 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 135/323 (41%), Positives = 204/323 (63%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK++++SG GG G ISFRREK+I FGGPDGG GG+GG+V + N+ TL+DF Y+ Sbjct: 2 FIDTAKIFVKSGKGGDGSISFRREKYIAFGGPDGGDGGKGGNVVLVVDPNMTTLLDFTYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA+ G G G G+D+ + VP+GT V + + ++ DL + ++A GG Sbjct: 62 RKYKAEPGGNGAGSKCFGKNGKDLHIKVPMGTIVKDVETDKIMADLSKPEDSYVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + T QAP +A PG+ +E+ I L+LKL+AD+G+IG PN GKST L+ V++A Sbjct: 122 GGKGNCRFTTPTRQAPDFAEPGMPEEERWIKLELKLLADVGLIGFPNVGKSTLLSVVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V EG F++ADIPGII+ A +G G+G FL+H ERT VL+ Sbjct: 182 RPKIANYHFTTLKPNLGVVSIEGVNNFVIADIPGIIEGASEGVGLGLDFLRHVERTRVLI 241 Query: 242 HIVSALEENVQAAYQCIL---DELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H++ + Y L +EL Y+ +L + +I+ ++ D + D + K ++ Sbjct: 242 HVIDISSVEGRDPYDDFLKINEELKRYSVKLYDRPQIIAANKSDMLFDEEKFEEFKTKVE 301 Query: 298 TQCGQVPFEFSSITGHGIPQILE 320 F+ S+ T G+ +++ Sbjct: 302 KHGYNKVFKISAATKQGVDDLMK 324 >gi|212550822|ref|YP_002309139.1| GTPase ObgE [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|261266664|sp|B6YRA6|OBG_AZOPC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|212549060|dbj|BAG83728.1| GTP-binding protein Obg [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 337 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 142/326 (43%), Positives = 210/326 (64%), Gaps = 5/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK++IRSG GG G I FR EK+I +GG DGG+GG+GGD+ ++ + N TL+ +++ Sbjct: 6 FVDYAKIHIRSGKGGKGSIHFRHEKYIPWGGSDGGNGGKGGDIILRGSRNYWTLLHLKHK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H A HG+ G + R G G++ + +P+GT VF+ I D+ + Q I+L GG Sbjct: 66 YHIFADHGKAGEGKLRHGKDGQNKTIELPIGTAVFDGTTGKFITDIKYDKQEIVLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FKS+ NQ P ++ PG +E+ I +LKL+AD+G++G PN GKST L+ V+ A Sbjct: 126 GGRGNNYFKSAVNQTPKHSQPGEPYEERQIVFQLKLLADVGLVGFPNTGKSTLLSIVSAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+V F++ADIPGI++ A++G G+G RFL+H ER +LL Sbjct: 186 KPKIADYAFTTLEPNLGVVNVHNSYTFVMADIPGIVEGANEGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ + ++ Y+ +L+EL+ YNSEL K I+ +S+ D +D+ K EL T Sbjct: 246 FMIPSDANDIANEYKILLNELACYNSELLNKQRILAISKSDMLDTKLEDVIKKELPT--- 302 Query: 302 QVPFEF-SSITGHGIPQILECLHDKI 326 +P F SS T GI + + L +K+ Sbjct: 303 DIPHIFISSFTQKGITVLKDLLWEKL 328 >gi|168181671|ref|ZP_02616335.1| Spo0B-associated GTP-binding protein [Clostridium botulinum Bf] gi|237796438|ref|YP_002863990.1| GTPase ObgE [Clostridium botulinum Ba4 str. 657] gi|182675057|gb|EDT87018.1| Spo0B-associated GTP-binding protein [Clostridium botulinum Bf] gi|229261884|gb|ACQ52917.1| GTPase, Obg family [Clostridium botulinum Ba4 str. 657] Length = 424 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 135/323 (41%), Positives = 204/323 (63%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK++++SG GG G ISFRREK+I FGGPDGG GG+GG+V + N+ TL+DF Y+ Sbjct: 2 FIDTAKIFVKSGKGGDGSISFRREKYIAFGGPDGGDGGKGGNVVLVVDPNMTTLLDFTYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA+ G G G G+D+ + VP+GT V + + ++ DL + ++A GG Sbjct: 62 RKYKAEPGGNGAGSKCFGKNGKDLHIKVPMGTIVKDAETDKIMADLSKPEDSYVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + T QAP +A PG+ +E+ I L+LKL+AD+G+IG PN GKST L+ V++A Sbjct: 122 GGKGNCRFTTPTRQAPDFAEPGMPEEERWIKLELKLLADVGLIGFPNVGKSTLLSVVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V EG F++ADIPGII+ A +G G+G FL+H ERT VL+ Sbjct: 182 RPKIANYHFTTLKPNLGVVSIEGVNNFVIADIPGIIEGASEGVGLGLDFLRHVERTRVLI 241 Query: 242 HIVSALEENVQAAYQCIL---DELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H++ + Y L +EL Y+ +L + +I+ ++ D + D + K ++ Sbjct: 242 HVIDISSVEGRDPYDDFLKINEELKRYSVKLYDRPQIIAANKSDMLFDEEKFEEFKTKVE 301 Query: 298 TQCGQVPFEFSSITGHGIPQILE 320 F+ S+ T G+ +++ Sbjct: 302 KYGYDKVFKISAATKQGVDDLMK 324 >gi|124025009|ref|YP_001014125.1| GTPase ObgE [Prochlorococcus marinus str. NATL1A] gi|261277673|sp|A2C050|OBG_PROM1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|123960077|gb|ABM74860.1| GTP1/OBG family [Prochlorococcus marinus str. NATL1A] Length = 329 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 132/323 (40%), Positives = 212/323 (65%), Gaps = 1/323 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A + +++G GG G +FRREK++ GGP GG GG+GG+V ++A NL TL+DF+ Sbjct: 1 MQFIDQAIIDVKAGSGGDGISAFRREKYVPAGGPAGGDGGQGGNVVLEADDNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ A++G++G +GA G+D VL VP GT+V ++ DL +GQ++I+A G Sbjct: 61 FQKLISAENGQRGGPNKCTGASGKDTVLKVPCGTEVRHLSTNIILGDLTNKGQQLIVAFG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GGFGNA + S++N+AP G +G+E + L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GKGGFGNARYLSNSNRAPEKFTEGKVGEEWSLQLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ + + ADIPG+I A +G G+G FL+H ERT V Sbjct: 181 SARPKIADYPFTTLIPNLGVVRRPSGDGTVFADIPGLISGASKGIGLGHDFLRHIERTKV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH++ + + ++ I +EL++Y L + I L++ + ++ + + N++ Sbjct: 241 LLHLIDSASTDPINDFKTINEELTSYGHGLISRPRIFVLNKKELLNEHEIKKLLNKIEKL 300 Query: 300 CGQVPFEFSSITGHGIPQILECL 322 + S++T G+ +L + Sbjct: 301 TMKKVHIISAVTKFGLDDLLSSI 323 >gi|308182478|ref|YP_003926605.1| GTPase ObgE [Helicobacter pylori PeCan4] gi|308064663|gb|ADO06555.1| GTPase ObgE [Helicobacter pylori PeCan4] Length = 360 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 154/330 (46%), Positives = 209/330 (63%), Gaps = 12/330 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GGAG +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGAGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF +D + L DL +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCTGKKGEDKIIVVPPGTQVFADDKLWL--DLIAPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A QG G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASQGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELAT 298 ++ A L+ ++ YQ + EL ++ L K V L++ D V++ D + + Sbjct: 240 FVLDASRLDLGIKEQYQRLRLELEKFSPALANKPFGVLLNKCDVVENIDKMTKD------ 293 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFS 328 C + E + G+ L LH + S Sbjct: 294 FCAFLNLEAQKLEAFGLEPYLGFLHPHLTS 323 >gi|218234435|ref|YP_002369248.1| GTPase ObgE [Bacillus cereus B4264] gi|261266672|sp|B7HE73|OBG_BACC4 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|218162392|gb|ACK62384.1| spo0B-associated GTP-binding protein [Bacillus cereus B4264] Length = 428 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 136/321 (42%), Positives = 211/321 (65%), Gaps = 5/321 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFVVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL GQ ++A GG Sbjct: 62 RHFKADRGQHGMSKGQHGRKSEDLLVKVPPGTVVKDEKTGQILADLVTHGQTAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F ++TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATATNPAPEIAENGEPGQERDVILELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ S LE + Y I +EL YN L ++ ++V +++D D++ + E Sbjct: 242 HVIDMSGLEGRDPYEDYVTINNELKEYNLRLTERPQVVVANKMDMPDAEENLQAFKEKVG 301 Query: 299 QCGQVPFEFSSITGHGIPQIL 319 + ++ F S++T G+ +L Sbjct: 302 EEVKI-FPISAVTRQGVRDLL 321 >gi|224437526|ref|ZP_03658484.1| GTPase ObgE [Helicobacter cinaedi CCUG 18818] gi|313143977|ref|ZP_07806170.1| GTPase ObgE [Helicobacter cinaedi CCUG 18818] gi|313129008|gb|EFR46625.1| GTPase ObgE [Helicobacter cinaedi CCUG 18818] Length = 384 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 136/284 (47%), Positives = 197/284 (69%), Gaps = 2/284 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++I SG GGAG +SFRREKF+ GGPDGG GG GGDV+++ +N +TL FR Sbjct: 2 FVDSVDIFIASGKGGAGAVSFRREKFVIQGGPDGGDGGDGGDVYVEVDNNTDTLSKFRGA 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KA++G+ G R SG +GED+ + VP+GTQ+ + D +I D+D+ R L GG Sbjct: 62 RHYKAKNGQPGGARRCSGKRGEDITIKVPLGTQILDFDTKEIIIDMDKCPMRSRLLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+HFK+STNQAP YA G+ G+E+ I L+LKLIAD+G++G PN GKST ++ ++ A Sbjct: 122 GGLGNSHFKNSTNQAPTYAQSGLSGEERHIALELKLIADVGLVGYPNVGKSTLISVLSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL PNLG+V G Y F++ADIPGII A +G G+G FLKH ERT +LL Sbjct: 182 KPEIANYEFTTLVPNLGVVDVGDYSSFVVADIPGIIDGASEGRGLGLEFLKHIERTKMLL 241 Query: 242 HIVSALEE-NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 ++ + ++ ++ + +EL ++ L+ + + LS+ DT+ Sbjct: 242 FVLDVSRDMDISLQFESLCNELGKFSHTLQTRPFGIVLSKSDTL 285 >gi|227514773|ref|ZP_03944822.1| GTP-binding protein [Lactobacillus fermentum ATCC 14931] gi|260663644|ref|ZP_05864533.1| GTP-binding protein [Lactobacillus fermentum 28-3-CHN] gi|227086882|gb|EEI22194.1| GTP-binding protein [Lactobacillus fermentum ATCC 14931] gi|260551870|gb|EEX24985.1| GTP-binding protein [Lactobacillus fermentum 28-3-CHN] Length = 435 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 135/328 (41%), Positives = 209/328 (63%), Gaps = 9/328 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ + +G GG G ++FRREK++ GGP GG GGRGG + ++ L TL+DFRY Sbjct: 4 FVDQIKIEVHAGHGGNGMVAFRREKYVPNGGPAGGDGGRGGSIILKVDEGLRTLMDFRYH 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++G+ GM + +GA +D V+ VP GT V + D ++ DL ++GQ +++A GG Sbjct: 64 RIFKAKNGQNGMSKQMTGAAADDTVIAVPQGTTVRDLDTGQIVGDLVEQGQELVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S N AP A G G++ + L+LK++AD+G+IG P+ GKST L+ VT A Sbjct: 124 GGRGNIHFASPKNPAPEIAENGEPGEDHYLELELKMLADVGLIGFPSVGKSTLLSVVTGA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V ++F +AD+PG+I A +G G+G +FL+H ERT VLL Sbjct: 184 KPKIAAYEFTTLVPNLGMVMLPDGRDFAMADMPGLINGASKGVGLGLQFLRHIERTRVLL 243 Query: 242 HIVSALEENVQAAYQCILD---ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V ++ + A + D EL++Y+ EL K+ +IV +++D ++ + +L Sbjct: 244 HLVDLGNQDAELALEKFHDINKELASYDPELLKRPQIVVATKMDLPEAQEHLDEFKKLLE 303 Query: 299 QCGQVP-----FEFSSITGHGIPQILEC 321 +P F S++T G+ ++++ Sbjct: 304 ADDTLPETPQVFAISAVTHAGVQELMQT 331 >gi|296127503|ref|YP_003634755.1| GTP-binding protein Obg/CgtA [Brachyspira murdochii DSM 12563] gi|296019319|gb|ADG72556.1| GTP-binding protein Obg/CgtA [Brachyspira murdochii DSM 12563] Length = 680 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 141/332 (42%), Positives = 214/332 (64%), Gaps = 5/332 (1%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D I +G GGAG +SFRRE + GGPDGG+GG GGDV ++ + +N+ + Sbjct: 3 QFIDVVNFEIEAGHGGAGSVSFRREAHVPMGGPDGGNGGDGGDVIVRVDARINSFGKIKS 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 ++ F+A+ GE G R G KG+DVV+ VP+GT +++ED +++ DL ++GQ +A GG Sbjct: 63 RKRFRARDGEPGRARLSDGKKGDDVVIRVPIGTVIYDEDTNNILADLLEDGQSYTVARGG 122 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN + ++TNQAP YA G+ G++ I L++KLIADIG++G+PNAGKS+ LA +TR Sbjct: 123 KGGKGNKFYATATNQAPDYAQHGLDGEKLNIRLEVKLIADIGLVGMPNAGKSSLLARLTR 182 Query: 182 AKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PKIA YPFTTL PNLG+ Y + F++ADIPGII+ A +GAG+G FL+H ERT L Sbjct: 183 ANPKIASYPFTTLTPNLGVCYLDYERSFVIADIPGIIEGASEGAGLGLTFLRHIERTGAL 242 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 ++ +E+V Y+ + +EL Y+ EL KK I+ L++ D ++ D + K + Sbjct: 243 CFVIDLTDEDVADTYKKLRNELKQYSKELIKKKSIIVLNKTDMLEEDEIKEKVKSIEKAV 302 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + ++ + T + P+I +FS+ G+ Sbjct: 303 KK-EYKNNKETHYEEPEIFAL---SVFSLEGD 330 >gi|197301712|ref|ZP_03166782.1| hypothetical protein RUMLAC_00438 [Ruminococcus lactaris ATCC 29176] gi|197299152|gb|EDY33682.1| hypothetical protein RUMLAC_00438 [Ruminococcus lactaris ATCC 29176] Length = 427 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 147/325 (45%), Positives = 213/325 (65%), Gaps = 10/325 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK++IRSG GG G SFRRE ++ GGPDGG GG+GGD+ + LNTL+D+R++ Sbjct: 2 FADRAKIFIRSGKGGDGHCSFRRELYVPNGGPDGGDGGKGGDLIFEVDEGLNTLVDYRHK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A GE+G KR G G+D+VL VP GT + E +I D+ + +R I+ GG Sbjct: 62 RKYAAGDGEQGGKRRCHGKDGKDLVLRVPEGTVIKEAVSGKVIADMSGDNRRQIVLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST Q P YA PG +E ++++LK+IAD+G+IG PN GKST L+ VT A Sbjct: 122 GGLGNQHFATSTMQVPKYAQPGQPARELEVYMELKVIADVGLIGFPNVGKSTLLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V +G K F++ADIPG+I+ A +G G+G FL+H ERT +++ Sbjct: 182 EPKIANYHFTTLNPNLGVVDLDGAKGFVMADIPGLIEGASEGVGLGHEFLRHVERTKLMI 241 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKN 294 H+V A + V Y+ I EL+AYN E+ ++ +++ ++ D + +SD + R K+ Sbjct: 242 HVVDAAGTEGRDPVDDIYK-INAELAAYNPEIAQRPQVIAANKTDLIYEPESDPVQRLKD 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQIL 319 E + +V F S TG GI ++L Sbjct: 301 EFEPKGIRV-FPISGATGKGISELL 324 >gi|281423653|ref|ZP_06254566.1| Obg family GTPase CgtA [Prevotella oris F0302] gi|281402205|gb|EFB33036.1| Obg family GTPase CgtA [Prevotella oris F0302] Length = 388 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 139/330 (42%), Positives = 211/330 (63%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + R K+ GGPDGG GG GG ++++ N TL+ +YQ Sbjct: 5 FVDYVKIYCRSGKGGRGSMHLRHVKYQPNGGPDGGDGGNGGSIYLRGNHNFWTLLHLKYQ 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G + G G+D + VP GT V+ + +CD+ +GQ ++L GG Sbjct: 65 RHIYAEHGGNGGRDKCHGTNGKDTYIDVPCGTVVYNAETGKYVCDVTYDGQEVLLLKGGR 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F+S+TNQAP YA PG +E I ++LKL+AD+G++G PNAGKST L++++ A Sbjct: 125 GGLGNFQFRSATNQAPRYAQPGEPMEEMTIIMELKLLADVGLVGFPNAGKSTLLSALSSA 184 Query: 183 KPKIADYPFTTLYPNLGIVKEGY---KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +PKIA+YPFTTL P+LGIV GY K F++ADIPGII+ A +G G+G RFL+H ER + Sbjct: 185 RPKIANYPFTTLEPSLGIV--GYRDSKSFVMADIPGIIEGASEGKGLGLRFLRHIERNSL 242 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LL +V ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + K+ L Sbjct: 243 LLFMVPGDTDDIKKEYEVLLNELRQFNPEMLDKHRVLAVTKSDLLDEELIDMLKDTLPQ- 301 Query: 300 CGQVPFEF-SSITGHGIPQILECLHDKIFS 328 +P F SS+TG G+ ++ + L ++ S Sbjct: 302 --DLPVVFISSVTGLGLNELKDVLWKELNS 329 >gi|258647400|ref|ZP_05734869.1| Obg family GTPase CgtA [Prevotella tannerae ATCC 51259] gi|260852768|gb|EEX72637.1| Obg family GTPase CgtA [Prevotella tannerae ATCC 51259] Length = 384 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 141/328 (42%), Positives = 209/328 (63%), Gaps = 5/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G I R K++ GGPDGG GGRGG+++++ N TL+ RY Sbjct: 6 FVDYVKIYCRSGKGGRGSIHLHRAKYMPNGGPDGGDGGRGGNIYLRGNHNYWTLLHLRYD 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G K G+ G D + VP GT ++ + ICD+ ++GQ ++L GG Sbjct: 66 RHVFAEHGGNGGKSLSHGSDGADKYIDVPCGTVAYDAETGKYICDVTEDGQVVMLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+S+TNQ P YA PG QE ++ L+LKL+AD+G++G PNAGKST L++++ A Sbjct: 126 GGKGNWHFRSATNQTPRYAQPGEPMQEMMVILELKLLADVGLVGFPNAGKSTLLSTLSSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+YPFTTL P+LGIV K F++ADIPGII+ A G G+G RFL+H ER +LL Sbjct: 186 RPKIANYPFTTLEPSLGIVAYRDAKSFVMADIPGIIEGASGGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V +N++ Y+ +L EL +N + K ++ +++ D +D + + K EL T Sbjct: 246 FMVPGDTDNIKREYEILLGELQKFNPAMLDKHRVLAVTKSDLLDDELIEMLKEELPT--- 302 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFS 328 +P F SS+ G+ ++ + L ++ S Sbjct: 303 DLPVIFISSVAQIGLQELKDTLWKELNS 330 >gi|299141272|ref|ZP_07034409.1| Obg family GTPase CgtA [Prevotella oris C735] gi|298577232|gb|EFI49101.1| Obg family GTPase CgtA [Prevotella oris C735] Length = 388 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 139/330 (42%), Positives = 211/330 (63%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + R K+ GGPDGG GG GG ++++ N TL+ +YQ Sbjct: 5 FVDYVKIYCRSGKGGRGSMHLRHVKYQPNGGPDGGDGGNGGSIYLRGNHNFWTLLHLKYQ 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G + G G+D + VP GT V+ + +CD+ +GQ ++L GG Sbjct: 65 RHIYAEHGGNGGRDKCHGTNGKDTYIDVPCGTVVYNAETGKYVCDVTYDGQEVLLLKGGR 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F+S+TNQAP YA PG +E I ++LKL+AD+G++G PNAGKST L++++ A Sbjct: 125 GGLGNFQFRSATNQAPRYAQPGEPMEEMTIIMELKLLADVGLVGFPNAGKSTLLSALSSA 184 Query: 183 KPKIADYPFTTLYPNLGIVKEGY---KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +PKIA+YPFTTL P+LGIV GY K F++ADIPGII+ A +G G+G RFL+H ER + Sbjct: 185 RPKIANYPFTTLEPSLGIV--GYRDSKSFVMADIPGIIEGASEGKGLGLRFLRHIERNSL 242 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LL +V ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + K+ L Sbjct: 243 LLFMVPGDTDDIKKEYEVLLNELRQFNPEMLDKHRVLAVTKSDLLDDELIDMLKDTLPQ- 301 Query: 300 CGQVPFEF-SSITGHGIPQILECLHDKIFS 328 +P F SS+TG G+ ++ + L ++ S Sbjct: 302 --DLPVVFISSVTGLGLNELKDVLWKELNS 329 >gi|42783578|ref|NP_980825.1| GTPase ObgE [Bacillus cereus ATCC 10987] gi|81830958|sp|Q72ZY5|OBG_BACC1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|42739507|gb|AAS43433.1| spo0B-associated GTP-binding protein [Bacillus cereus ATCC 10987] Length = 428 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 137/322 (42%), Positives = 210/322 (65%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFVVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL GQ ++A GG Sbjct: 62 RHFKADRGQHGMSKGQHGRKAEDLIVKVPPGTVVKDEKTGQILADLVTHGQSAVIARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATPTNPAPEIAENGEPGQERDVILELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE + Y I +EL YN L ++ ++V +++D D+ + L K ++ Sbjct: 242 HVIDMSGLEGRDPYEDYVTINNELKEYNLRLTERPQVVVANKMDMPDAEENLQAFKEKVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 302 DEVKIFP--ISAVTKQGVRDLL 321 >gi|30022515|ref|NP_834146.1| GTPase ObgE [Bacillus cereus ATCC 14579] gi|228923194|ref|ZP_04086484.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228954724|ref|ZP_04116746.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960717|ref|ZP_04122356.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|229048153|ref|ZP_04193722.1| Spo0B-associated GTP-binding protein [Bacillus cereus AH676] gi|229071950|ref|ZP_04205160.1| Spo0B-associated GTP-binding protein [Bacillus cereus F65185] gi|229081706|ref|ZP_04214199.1| Spo0B-associated GTP-binding protein [Bacillus cereus Rock4-2] gi|229111912|ref|ZP_04241456.1| Spo0B-associated GTP-binding protein [Bacillus cereus Rock1-15] gi|229129719|ref|ZP_04258687.1| Spo0B-associated GTP-binding protein [Bacillus cereus BDRD-Cer4] gi|229147011|ref|ZP_04275371.1| Spo0B-associated GTP-binding protein [Bacillus cereus BDRD-ST24] gi|296504932|ref|YP_003666632.1| GTPase ObgE [Bacillus thuringiensis BMB171] gi|81837286|sp|Q817U6|OBG_BACCR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|29898073|gb|AAP11347.1| GTP-binding protein [Bacillus cereus ATCC 14579] gi|228636399|gb|EEK92869.1| Spo0B-associated GTP-binding protein [Bacillus cereus BDRD-ST24] gi|228653836|gb|EEL09706.1| Spo0B-associated GTP-binding protein [Bacillus cereus BDRD-Cer4] gi|228671476|gb|EEL26776.1| Spo0B-associated GTP-binding protein [Bacillus cereus Rock1-15] gi|228701551|gb|EEL54044.1| Spo0B-associated GTP-binding protein [Bacillus cereus Rock4-2] gi|228711109|gb|EEL63074.1| Spo0B-associated GTP-binding protein [Bacillus cereus F65185] gi|228723140|gb|EEL74516.1| Spo0B-associated GTP-binding protein [Bacillus cereus AH676] gi|228798933|gb|EEM45908.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|228804922|gb|EEM51519.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228836400|gb|EEM81751.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296325984|gb|ADH08912.1| GTPase ObgE [Bacillus thuringiensis BMB171] Length = 428 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 137/322 (42%), Positives = 211/322 (65%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFVVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL GQ ++A GG Sbjct: 62 RHFKADRGQHGMSKGQHGRKSEDLLVKVPPGTVVKDEKTGQILADLVTHGQTAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F ++TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATATNPAPEIAENGEPGQERDVILELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE + Y I +EL YN L ++ ++V +++D D+ + L K ++ Sbjct: 242 HVIDMSGLEGRDPYEDYVTINNELKEYNLRLTERPQVVVANKMDMPDAEENLQAFKEKVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 302 DEVKIFP--ISAVTRQGVRDLL 321 >gi|206969459|ref|ZP_03230413.1| spo0B-associated GTP-binding protein [Bacillus cereus AH1134] gi|229152643|ref|ZP_04280831.1| Spo0B-associated GTP-binding protein [Bacillus cereus m1550] gi|229180717|ref|ZP_04308055.1| Spo0B-associated GTP-binding protein [Bacillus cereus 172560W] gi|229192652|ref|ZP_04319611.1| Spo0B-associated GTP-binding protein [Bacillus cereus ATCC 10876] gi|206735147|gb|EDZ52315.1| spo0B-associated GTP-binding protein [Bacillus cereus AH1134] gi|228590742|gb|EEK48602.1| Spo0B-associated GTP-binding protein [Bacillus cereus ATCC 10876] gi|228602695|gb|EEK60178.1| Spo0B-associated GTP-binding protein [Bacillus cereus 172560W] gi|228630789|gb|EEK87430.1| Spo0B-associated GTP-binding protein [Bacillus cereus m1550] Length = 428 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 137/322 (42%), Positives = 211/322 (65%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFVVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL GQ ++A GG Sbjct: 62 RHFKADRGQHGMSKGQHGRKSEDLLVKVPPGTVVKDEKTGQILADLVTHGQTAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F ++TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATATNPAPEIAENGEPGQERDVILELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE + Y I +EL YN L ++ ++V +++D D+ + L K ++ Sbjct: 242 HVIDMSGLEGRDPYEDYVTINNELKEYNLRLTERPQVVVANKMDMPDAEENLQAFKEKVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 302 DEVKIFP--ISAVTRQGVRDLL 321 >gi|30264509|ref|NP_846886.1| GTPase ObgE [Bacillus anthracis str. Ames] gi|47529971|ref|YP_021320.1| GTPase ObgE [Bacillus anthracis str. 'Ames Ancestor'] gi|49187333|ref|YP_030585.1| GTPase ObgE [Bacillus anthracis str. Sterne] gi|65321810|ref|ZP_00394769.1| COG0536: Predicted GTPase [Bacillus anthracis str. A2012] gi|165871982|ref|ZP_02216623.1| spo0B-associated GTP-binding protein [Bacillus anthracis str. A0488] gi|167636184|ref|ZP_02394488.1| spo0B-associated GTP-binding protein [Bacillus anthracis str. A0442] gi|167640747|ref|ZP_02399007.1| spo0B-associated GTP-binding protein [Bacillus anthracis str. A0193] gi|170688658|ref|ZP_02879863.1| spo0B-associated GTP-binding protein [Bacillus anthracis str. A0465] gi|170709110|ref|ZP_02899537.1| spo0B-associated GTP-binding protein [Bacillus anthracis str. A0389] gi|177653960|ref|ZP_02936001.1| spo0B-associated GTP-binding protein [Bacillus anthracis str. A0174] gi|190566851|ref|ZP_03019767.1| spo0B-associated GTP-binding protein [Bacillus anthracis Tsiankovskii-I] gi|227817221|ref|YP_002817230.1| spo0B-associated GTP-binding protein [Bacillus anthracis str. CDC 684] gi|229602640|ref|YP_002868725.1| spo0B-associated GTP-binding protein [Bacillus anthracis str. A0248] gi|254684198|ref|ZP_05148058.1| GTPase ObgE [Bacillus anthracis str. CNEVA-9066] gi|254736545|ref|ZP_05194251.1| GTPase ObgE [Bacillus anthracis str. Western North America USA6153] gi|254741583|ref|ZP_05199270.1| GTPase ObgE [Bacillus anthracis str. Kruger B] gi|254751318|ref|ZP_05203355.1| GTPase ObgE [Bacillus anthracis str. Vollum] gi|81837589|sp|Q81LF0|OBG_BACAN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|30259167|gb|AAP28372.1| spo0B-associated GTP-binding protein [Bacillus anthracis str. Ames] gi|47505119|gb|AAT33795.1| spo0B-associated GTP-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49181260|gb|AAT56636.1| spo0B-associated GTP-binding protein [Bacillus anthracis str. Sterne] gi|164712272|gb|EDR17808.1| spo0B-associated GTP-binding protein [Bacillus anthracis str. A0488] gi|167511319|gb|EDR86705.1| spo0B-associated GTP-binding protein [Bacillus anthracis str. A0193] gi|167528405|gb|EDR91173.1| spo0B-associated GTP-binding protein [Bacillus anthracis str. A0442] gi|170125962|gb|EDS94862.1| spo0B-associated GTP-binding protein [Bacillus anthracis str. A0389] gi|170667344|gb|EDT18102.1| spo0B-associated GTP-binding protein [Bacillus anthracis str. A0465] gi|172081015|gb|EDT66093.1| spo0B-associated GTP-binding protein [Bacillus anthracis str. A0174] gi|190561842|gb|EDV15811.1| spo0B-associated GTP-binding protein [Bacillus anthracis Tsiankovskii-I] gi|227004970|gb|ACP14713.1| spo0B-associated GTP-binding protein [Bacillus anthracis str. CDC 684] gi|229267048|gb|ACQ48685.1| spo0B-associated GTP-binding protein [Bacillus anthracis str. A0248] Length = 428 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 137/322 (42%), Positives = 211/322 (65%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FIDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFIVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL GQ ++A GG Sbjct: 62 RHFKADRGQHGMSKGQHGRKSEDLLVKVPPGTVVKDEKTGQILADLVTHGQTAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F ++TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATATNPAPEIAENGEPGQERDVILELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE + Y I +EL YN L ++ ++V +++D D+ + L K ++ Sbjct: 242 HVIDMSGLEGRDPYEDYVTINNELKEYNLRLTERPQVVVANKMDMPDAEENLQAFKEKVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 302 DEVKIFP--ISAVTKQGVRDLL 321 >gi|227484966|ref|ZP_03915282.1| GTP-binding protein [Anaerococcus lactolyticus ATCC 51172] gi|227237121|gb|EEI87136.1| GTP-binding protein [Anaerococcus lactolyticus ATCC 51172] Length = 426 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 143/324 (44%), Positives = 220/324 (67%), Gaps = 6/324 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 +D AK+ I++GDGG G +++RREK+ GGP GG GG GG + I+AT NL+TL +FRY+ Sbjct: 1 MIDIAKISIKAGDGGNGAVAWRREKYEPTGGPAGGDGGDGGSIIIKATRNLSTLDEFRYK 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++FKA++GE+G K + G KGED+ + VPVGT + E + ++I D+ +G+ ++A GG Sbjct: 61 KNFKAENGEQGGKSKKFGKKGEDLYIPVPVGTLIREAESNTIIKDMKNDGEEFLIAKGGR 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+S QAP +A G GQE + +LK++AD+G++GLPN GKST L+ +T+A Sbjct: 121 GGRGNVHFKNSIRQAPRFAESGKKGQEIDLIFELKVLADVGLVGLPNVGKSTLLSVITKA 180 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+VK + + FI+ADI G+I+ A +G+G+G FL+H ER +L+ Sbjct: 181 RPKIANYHFTTIDPNLGVVKVDNERSFIVADIAGLIEGASEGSGLGHDFLRHIERCRILI 240 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V S LE + ++ I EL YN +L +K IV L++ + +D + A K E Sbjct: 241 HLVDISGLEGRDPIEDFKLINKELKLYNKKLSEKPMIVALNKCE-LDYNDNAAKFIEQYD 299 Query: 299 QCGQVPFEFSSITGHGIPQILECL 322 ++ F+ S+ T GI ++++ + Sbjct: 300 DSYKI-FKISAATTAGIKEMIDYV 322 >gi|262275070|ref|ZP_06052881.1| GTP-binding protein Obg [Grimontia hollisae CIP 101886] gi|262221633|gb|EEY72947.1| GTP-binding protein Obg [Grimontia hollisae CIP 101886] Length = 391 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 141/292 (48%), Positives = 202/292 (69%), Gaps = 6/292 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK++ GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEAVIRVEAGDGGNGTVSFRREKYVPKGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A GE G N +G +G+D+VL VPVGT+ +ED I DL G ++++A G Sbjct: 61 FERFHAAGRGENGRGGNCTGKRGDDLVLNVPVGTRAIDEDTGETIADLTHHGMKVMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP + G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQKSMGTKGELRHLRLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRVADNKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH++ + + V A+ I++EL Y+ +L +K + ++ID + + Sbjct: 241 LLHMIDLMPVDGSDPVDNAF-TIIEELQRYSEKLAEKPRWILFNKIDLMSEE 291 >gi|332673148|gb|AEE69965.1| obg family GTPase CgtA [Helicobacter pylori 83] Length = 360 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 154/330 (46%), Positives = 210/330 (63%), Gaps = 12/330 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG+G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGSGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF +D + L DL + +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCAGKKGEDKIIVVPPGTQVFADDKLWL--DLVEPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A +G G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASEGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELAT 298 ++ A L+ ++ YQ + EL ++S L K V L++ D V + D L + Sbjct: 240 FVLDASRLDLGIKEQYQRLRLELEKFSSALANKPFGVLLNKCDVVGNIDELTKD------ 293 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFS 328 C + E + G+ L LH + S Sbjct: 294 FCAFLNLEVQKLEAFGLEPHLGFLHPHLTS 323 >gi|312892085|ref|ZP_07751585.1| GTP-binding protein Obg/CgtA [Mucilaginibacter paludis DSM 18603] gi|311295457|gb|EFQ72626.1| GTP-binding protein Obg/CgtA [Mucilaginibacter paludis DSM 18603] Length = 333 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 143/326 (43%), Positives = 196/326 (60%), Gaps = 4/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D KV RSG GGAG R+ GGPDGG GGRGG V ++ + TL+ +Y+ Sbjct: 7 FVDYVKVCCRSGHGGAGSSHLHRDILTSKGGPDGGDGGRGGHVIVRGNAQFWTLLHLKYR 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A GE G R+G G+D +L VP+GT + + ++ ++ Q+G+ IL GG Sbjct: 67 KHIIAADGESGGSSLRTGKNGKDEILEVPLGTIAKDAETGEILFEITQDGETKILTSGGR 126 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSST Q P +A PG GQE L+LK++AD+G++G PNAGKST L+ V+ A Sbjct: 127 GGLGNWHFKSSTQQTPRFAQPGEEGQEVWNILELKVLADVGLVGFPNAGKSTLLSVVSAA 186 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IADY FTTL PNLGIV K F++ADIPGII+ A G G+G RFL+H ER VLL Sbjct: 187 KPEIADYSFTTLVPNLGIVAYRDNKSFVMADIPGIIEGASTGKGLGFRFLRHIERNSVLL 246 Query: 242 HIVSA-LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 ++ A +Q YQ +L EL+ YN EL K I+ +++ D +D + EL Sbjct: 247 FMIPADTSRTIQEEYQILLHELTEYNPELTHKPRILAITKADMLDEELQQEMAKELP--A 304 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G SS+ G+ ++ + L +I Sbjct: 305 GIEAVFISSVAQKGLTELKDLLWKEI 330 >gi|217033404|ref|ZP_03438834.1| hypothetical protein HP9810_1g18 [Helicobacter pylori 98-10] gi|216944109|gb|EEC23537.1| hypothetical protein HP9810_1g18 [Helicobacter pylori 98-10] Length = 360 Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 154/330 (46%), Positives = 209/330 (63%), Gaps = 12/330 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF +D + L DL + +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCAGKKGEDKIIVVPPGTQVFADDKLWL--DLVEPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A QG G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASQGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELAT 298 ++ A L+ ++ YQ + EL ++ L K V L++ D V++ D L + Sbjct: 240 FVLDAFRLDLGIKEQYQRLRLELEKFSPALANKPFGVLLNKCDVVENIDELTKD------ 293 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFS 328 C + E + G+ L LH + S Sbjct: 294 FCAFLNLEAQKLEAFGLEPYLGFLHPHLTS 323 >gi|218905635|ref|YP_002453469.1| spo0B-associated GTP-binding protein [Bacillus cereus AH820] gi|229123981|ref|ZP_04253173.1| Spo0B-associated GTP-binding protein [Bacillus cereus 95/8201] gi|261266669|sp|B7JQ26|OBG_BACC0 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|218537270|gb|ACK89668.1| spo0B-associated GTP-binding protein [Bacillus cereus AH820] gi|228659283|gb|EEL14931.1| Spo0B-associated GTP-binding protein [Bacillus cereus 95/8201] Length = 428 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 137/322 (42%), Positives = 211/322 (65%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFIVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL GQ ++A GG Sbjct: 62 RHFKADRGQHGMSKGQHGRKSEDLLVKVPPGTVVKDEKTGQILADLVTHGQTAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F ++TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATATNPAPEIAENGEPGQERDVILELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE + Y I +EL YN L ++ ++V +++D D+ + L K ++ Sbjct: 242 HVIDMSGLEGRDPYEDYVTINNELKEYNLRLTERPQVVVANKMDMPDAEENLQAFKEKVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 302 DEVKIFP--ISAVTKQGVRDLL 321 >gi|257066422|ref|YP_003152678.1| GTP-binding protein Obg/CgtA [Anaerococcus prevotii DSM 20548] gi|256798302|gb|ACV28957.1| GTP-binding protein Obg/CgtA [Anaerococcus prevotii DSM 20548] Length = 426 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 139/326 (42%), Positives = 218/326 (66%), Gaps = 6/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 +D A+V +++GDGG G +++RREK+ GGP GG GG GG + I+AT NL+TL +FRY+ Sbjct: 1 MIDYARVSLKAGDGGNGAVAWRREKYEPNGGPAGGDGGNGGSIIIKATRNLSTLDEFRYK 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +KAQ+GE G K+ + G KG+D+++ VPVGT V E + +I DL+++G+ ++A GG Sbjct: 61 TKYKAQNGEAGGKKKKFGKKGDDLIIKVPVGTLVREANSEVIIKDLNKDGEEYVIAKGGR 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+S QAP +A G GQE + +LK++AD+G++GLPN GKST ++ +++A Sbjct: 121 GGRGNVHFKNSIRQAPRFAELGRSGQEIEVIFELKILADVGLVGLPNVGKSTLISVISKA 180 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V + + FI+ADIPG+I+ A G+G+G FLKH ER VL+ Sbjct: 181 RPKIANYHFTTIDPNLGVVNIDSERSFIVADIPGLIEGASDGSGLGHDFLKHVERCRVLV 240 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V S +E N ++ I +EL YN +L +K I+ +++ D + NE + Sbjct: 241 HLVDISGIEGRNPIEDFKMINEELKLYNEKLAQKPMIIAMNKSDLDFNKNSDEFINEFSD 300 Query: 299 QCGQVPFEFSSITGHGIPQILECLHD 324 + ++ S+ T GI ++++ + + Sbjct: 301 KYD--IYKISAATTEGIKELVDAISE 324 >gi|187778432|ref|ZP_02994905.1| hypothetical protein CLOSPO_02026 [Clostridium sporogenes ATCC 15579] gi|187772057|gb|EDU35859.1| hypothetical protein CLOSPO_02026 [Clostridium sporogenes ATCC 15579] Length = 424 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 134/323 (41%), Positives = 203/323 (62%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK++++SG GG G ISFRREK+I FGGPDGG GG+GG+V + N+ TL+DF Y+ Sbjct: 2 FIDTAKIFVKSGKGGDGSISFRREKYIAFGGPDGGDGGKGGNVVLVVDPNMTTLLDFTYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA+ G G G G+D+ + VP+GT V + + ++ DL + ++A GG Sbjct: 62 RKYKAEPGGNGAGSKCFGKNGKDLYIKVPMGTIVRDAETDKIMADLSKPEDSYVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + T QAP +A PG+ +E+ I L+LKL+AD+G+IG PN GKST L+ V++A Sbjct: 122 GGKGNCRFTTPTRQAPDFAEPGMPEEERWIRLELKLLADVGLIGFPNVGKSTLLSVVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V EG F++ADIPGII+ A +G G+G FL+H ERT VL+ Sbjct: 182 RPKIANYHFTTLKPNLGVVSIEGVTNFVIADIPGIIEGASEGVGLGLDFLRHVERTRVLI 241 Query: 242 HIVSALEENVQAAYQCIL---DELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H++ + Y L +EL Y+ +L + +I+ ++ D + D + K ++ Sbjct: 242 HVIDISSVEGRDPYDDFLKINEELKRYSVKLYDRPQIIAANKSDMLFDEEKFEEFKTKIE 301 Query: 298 TQCGQVPFEFSSITGHGIPQILE 320 + S+ T G+ +++ Sbjct: 302 KLGYNKVLKISAATKQGVDDLMK 324 >gi|94967051|ref|YP_589099.1| GTPase ObgE [Candidatus Koribacter versatilis Ellin345] gi|261266629|sp|Q1IVS5|OBG_ACIBL RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|94549101|gb|ABF39025.1| Small GTP-binding protein [Candidatus Koribacter versatilis Ellin345] Length = 365 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 146/341 (42%), Positives = 225/341 (65%), Gaps = 11/341 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DEAK+ +++G+GG G ++FRREKF+ GGP GG GGRGGDV ++++ NTL+ FR+ Sbjct: 2 FVDEAKIRVKAGNGGNGIVAFRREKFVPRGGPWGGDGGRGGDVIMESSERHNTLVHFRFN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +KA+ G G N++G +G DV+L VPVGT V++++ L+ + +RII+A GG Sbjct: 62 PEYKAERGRHGEGANKTGREGVDVLLKVPVGTLVYDDETGELLHEFVHPDERIIIARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F + T+QAP + G +G EK + L+LKL+AD+G++G PNAGKST ++ ++ A Sbjct: 122 GGRGNAQFATPTHQAPRESEDGKIGDEKFLRLELKLLADVGLVGYPNAGKSTLISRISSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG----YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 +PKIADYPFTTL PNLG+V G + +++ADIPG+I+ A GAG+G +FL+H ERT Sbjct: 182 RPKIADYPFTTLQPNLGVVVVGEMPHEQSYVVADIPGLIEGASLGAGLGMQFLRHVERTR 241 Query: 239 VLLHIV-----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++ H+V S + VQ Y+ I EL+++ S + KK I+ ++ID + D L +K Sbjct: 242 LIAHLVDVSDASGRPDPVQ-DYKVITKELASFGSGIEKKPTIIVATKIDVANPDKL-KKL 299 Query: 294 NELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 A + + F S++TG GI + + ++ +IR + + Sbjct: 300 TTFAKRSKKAFFAISAVTGEGIEPLKWEMAKRVEAIRAKAQ 340 >gi|283470920|emb|CAQ50131.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus ST398] Length = 430 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 140/330 (42%), Positives = 208/330 (63%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVVFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE G N G ED+VL VP GT + D ++ DL ++GQR ++A GG Sbjct: 62 RHFKASKGENGQSSNMHGKNAEDLVLKVPPGTIIKNVDTDEVLADLVEDGQRAVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDQRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 H++ S E ++ Y+ I EL+AY L + +IV +++D +S D L K E+ Sbjct: 242 HMIDMSGSEGREPIE-DYKVINQELAAYEQRLEDRPQIVVANKMDLPESQDNLILFKEEI 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +P S+IT I Q+L + DK+ Sbjct: 301 GEDVPVIP--VSTITRDNIDQLLYAIADKL 328 >gi|47566631|ref|ZP_00237453.1| GTP-binding protein [Bacillus cereus G9241] gi|228987693|ref|ZP_04147804.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229158057|ref|ZP_04286127.1| Spo0B-associated GTP-binding protein [Bacillus cereus ATCC 4342] gi|47556661|gb|EAL14993.1| GTP-binding protein [Bacillus cereus G9241] gi|228625376|gb|EEK82133.1| Spo0B-associated GTP-binding protein [Bacillus cereus ATCC 4342] gi|228771967|gb|EEM20422.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 428 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 137/322 (42%), Positives = 211/322 (65%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFIVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL GQ ++A GG Sbjct: 62 RHFKADRGQHGMSKGQHGRKSEDLLVKVPPGTVVKDEKTGQILADLVTHGQTAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F ++TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATATNPAPEIAENGEPGQERDVILELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE + Y I +EL YN L ++ ++V +++D D+ + L K ++ Sbjct: 242 HVIDMSGLEGRDPYEDYVTINNELKEYNLRLTERPQVVVANKMDMPDAEENLQAFKEKVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 302 DEVKIFP--ISAVTRQGVRDLL 321 >gi|49481594|ref|YP_038491.1| GTPase ObgE [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141065|ref|YP_085764.1| GTPase ObgE [Bacillus cereus E33L] gi|118479596|ref|YP_896747.1| GTPase ObgE [Bacillus thuringiensis str. Al Hakam] gi|196034393|ref|ZP_03101802.1| spo0B-associated GTP-binding protein [Bacillus cereus W] gi|196039373|ref|ZP_03106679.1| spo0B-associated GTP-binding protein [Bacillus cereus NVH0597-99] gi|196044818|ref|ZP_03112052.1| spo0B-associated GTP-binding protein [Bacillus cereus 03BB108] gi|225866422|ref|YP_002751800.1| spo0B-associated GTP-binding protein [Bacillus cereus 03BB102] gi|228917079|ref|ZP_04080637.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929486|ref|ZP_04092506.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935760|ref|ZP_04098572.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948155|ref|ZP_04110439.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229093514|ref|ZP_04224616.1| Spo0B-associated GTP-binding protein [Bacillus cereus Rock3-42] gi|229186682|ref|ZP_04313841.1| Spo0B-associated GTP-binding protein [Bacillus cereus BGSC 6E1] gi|254724631|ref|ZP_05186414.1| GTPase ObgE [Bacillus anthracis str. A1055] gi|301055948|ref|YP_003794159.1| spo0B-associated GTP-binding protein [Bacillus anthracis CI] gi|81824179|sp|Q634A3|OBG_BACCZ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|81828195|sp|Q6HD85|OBG_BACHK RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266668|sp|A0RJ47|OBG_BACAH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266671|sp|C1ETN7|OBG_BACC3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|49333150|gb|AAT63796.1| spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974534|gb|AAU16084.1| spo0B-associated GTP-binding protein [Bacillus cereus E33L] gi|118418821|gb|ABK87240.1| spo0B-associated GTP-binding protein [Bacillus thuringiensis str. Al Hakam] gi|195992935|gb|EDX56894.1| spo0B-associated GTP-binding protein [Bacillus cereus W] gi|196024306|gb|EDX62979.1| spo0B-associated GTP-binding protein [Bacillus cereus 03BB108] gi|196030000|gb|EDX68601.1| spo0B-associated GTP-binding protein [Bacillus cereus NVH0597-99] gi|225785816|gb|ACO26033.1| spo0B-associated GTP-binding protein [Bacillus cereus 03BB102] gi|228596785|gb|EEK54446.1| Spo0B-associated GTP-binding protein [Bacillus cereus BGSC 6E1] gi|228689844|gb|EEL43649.1| Spo0B-associated GTP-binding protein [Bacillus cereus Rock3-42] gi|228811513|gb|EEM57850.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823817|gb|EEM69637.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830166|gb|EEM75783.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842497|gb|EEM87587.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|300378117|gb|ADK07021.1| spo0B-associated GTP-binding protein [Bacillus cereus biovar anthracis str. CI] Length = 428 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 137/322 (42%), Positives = 211/322 (65%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFIVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL GQ ++A GG Sbjct: 62 RHFKADRGQHGMSKGQHGRKSEDLLVKVPPGTVVKDEKTGQILADLVTHGQTAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F ++TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATATNPAPEIAENGEPGQERDVILELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE + Y I +EL YN L ++ ++V +++D D+ + L K ++ Sbjct: 242 HVIDMSGLEGRDPYEDYVTINNELKEYNLRLTERPQVVVANKMDMPDAEENLQAFKEKVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 302 DEVKIFP--ISAVTKQGVRDLL 321 >gi|282858335|ref|ZP_06267515.1| Obg family GTPase CgtA [Prevotella bivia JCVIHMP010] gi|282588783|gb|EFB93908.1| Obg family GTPase CgtA [Prevotella bivia JCVIHMP010] Length = 390 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 137/322 (42%), Positives = 206/322 (63%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + R K+ GGPDGG GG+GG V+++ N TL+ ++Q Sbjct: 6 FVDYVKIYCRSGKGGRGSMHLRHVKYNPNGGPDGGDGGKGGSVFLRGNHNYWTLLHLKFQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G + G G+DV + VP GT V++ + +CD+ +GQ + L GG Sbjct: 66 RHVYAEHGGNGGRDKCHGTDGKDVYIDVPCGTVVYDAETGKFVCDVMHDGQVVPLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F++STNQAP YA PG QE + ++LKL+AD+G++G PNAGKST L++++ A Sbjct: 126 GGLGNFQFRTSTNQAPRYAQPGEPMQEMTVIMELKLLADVGLVGFPNAGKSTLLSALSSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTT+ P+LGIV + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 KPKIANYPFTTMEPSLGIVSYRDNQSFVMADIPGIIEGASEGRGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + K L Sbjct: 246 FMVPGDTDDIKKEYEILLNELKQFNPEMIDKHRVLAITKCDLLDEELIEMLKETLP---D 302 Query: 302 QVPFEF-SSITGHGIPQILECL 322 +P F SS+TG GI + + L Sbjct: 303 DLPVVFISSVTGFGIDDLKDVL 324 >gi|261854895|ref|YP_003262178.1| GTP-binding protein Obg/CgtA [Halothiobacillus neapolitanus c2] gi|261835364|gb|ACX95131.1| GTP-binding protein Obg/CgtA [Halothiobacillus neapolitanus c2] Length = 375 Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 133/270 (49%), Positives = 193/270 (71%), Gaps = 4/270 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAKV +++GDGG G I FRREK++ +GGPDGG GG GG V+ +NLNTL DFR Sbjct: 1 MKFVDEAKVKVKAGDGGNGVIGFRREKYVPYGGPDGGDGGDGGSVYFLGDANLNTLADFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + +H++AQ GE G N +GAKG D+ + VP+GT V + D ++ ++ Q +++A G Sbjct: 61 FVRHYEAQRGENGSGSNMTGAKGADLWVRVPLGTVVHDIDTGEILGEVLDPAQPLLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSSTN+AP G G E+ + L+L+++AD+G++G+PNAGKST + +++ Sbjct: 121 GWHGLGNARFKSSTNRAPRQKTEGTPGDERRLLLELRVLADVGLLGMPNAGKSTLIRAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +AKPK+ADYPFTTL+PNLG+V E ++ F++ADIPG+I+ A +GAG+G +FL+H RT++ Sbjct: 181 QAKPKVADYPFTTLHPNLGVVAPEPHRSFVVADIPGLIEGAAEGAGLGHQFLRHLARTNL 240 Query: 240 LLHIVSAL---EENVQAAYQCILDELSAYN 266 LLHIV E + + I +EL Y+ Sbjct: 241 LLHIVDVAPLDEADPIESVAIIEEELVRYD 270 >gi|188527109|ref|YP_001909796.1| GTPase ObgE [Helicobacter pylori Shi470] gi|261266832|sp|B2USD4|OBG_HELPS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|188143349|gb|ACD47766.1| GTPase ObgE [Helicobacter pylori Shi470] Length = 360 Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 153/330 (46%), Positives = 210/330 (63%), Gaps = 12/330 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF +D + L DL + +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCAGKKGEDKIIVVPPGTQVFVDDALWL--DLVEPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A +G G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASEGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELAT 298 ++ A L+ ++ YQ + EL ++ L K V L++ D V++ D +A+ Sbjct: 240 FVLDASRLDLGIKEQYQRLRLELEKFSPALANKPFGVLLNKCDVVENIDEMAKD------ 293 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFS 328 C + E + G+ L LH + S Sbjct: 294 FCTFLNLEAQKLEAFGLEPYLGFLHPHLTS 323 >gi|228941608|ref|ZP_04104155.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974537|ref|ZP_04135103.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981132|ref|ZP_04141432.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis Bt407] gi|228778332|gb|EEM26599.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis Bt407] gi|228784940|gb|EEM32953.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817820|gb|EEM63898.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942220|gb|AEA18116.1| GTPase ObgE [Bacillus thuringiensis serovar chinensis CT-43] Length = 428 Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 137/322 (42%), Positives = 210/322 (65%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFVVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL GQ ++A GG Sbjct: 62 RHFKADRGQHGMSKGQHGRKSEDLLVKVPPGTVVKDEKTGQILADLVTHGQTAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F ++TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATATNPAPEIAENGEPGQERDVILELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE Y I +EL YN L ++ ++V +++D D+ + L K ++ Sbjct: 242 HVIDMSGLEGREPYEDYVTINNELKEYNLRLTERPQVVVANKMDMPDAEENLQAFKEKVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 302 DEVKIFP--ISAVTRQGVRDLL 321 >gi|326692443|ref|ZP_08229448.1| GTPase CgtA [Leuconostoc argentinum KCTC 3773] Length = 449 Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 133/336 (39%), Positives = 214/336 (63%), Gaps = 11/336 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D+A++ +++G GG G +SFR EKF+ GGP GG GG GG + ++ L TL+DFR Sbjct: 11 MAFVDQAEIEVKAGKGGDGIVSFRHEKFVAMGGPFGGDGGHGGSIILKVDEGLRTLMDFR 70 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HFKAQ G G + +GA +D + +P GT V + D ++ D+ + GQ +++A G Sbjct: 71 YNRHFKAQPGGNGGTKGMTGASSDDRYIKIPQGTIVKDADTGEILGDMLENGQELVVAKG 130 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF + N AP + G G+ + + L+L+++AD+G++G P+AGKST L+ V+ Sbjct: 131 GRGGRGNIHFATPANPAPELSENGEPGEVRNLKLELRVLADVGLVGFPSAGKSTLLSVVS 190 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+A Y FTTL PN+G+V+ ++F++AD+PG+I+ A QG G+G +FL+H ERT V Sbjct: 191 NAKPKVAAYHFTTLAPNIGMVRLPDERDFVMADLPGLIEGAAQGVGLGFQFLRHVERTKV 250 Query: 240 LLHIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNE 295 +LH+V S +E + Y+ ILDEL Y+ + + I+ +++D DS D L + + + Sbjct: 251 ILHLVDMSGIEGTDPYTQYRKILDELQQYDETILARPHIIVPTKMDMPDSADNLVKFREQ 310 Query: 296 LATQCGQVPFE-----FSSITGHGIPQILECLHDKI 326 +A G +P + S++T G+ +++ D + Sbjct: 311 VAADSG-LPTQPKIMPISALTRDGVQELMRVTADTL 345 >gi|312898641|ref|ZP_07758031.1| Obg family GTPase CgtA [Megasphaera micronuciformis F0359] gi|310620560|gb|EFQ04130.1| Obg family GTPase CgtA [Megasphaera micronuciformis F0359] Length = 424 Score = 232 bits (591), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 144/338 (42%), Positives = 226/338 (66%), Gaps = 11/338 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A+++++SG GG G SFR EK++ GGP+GG GGRGG+V + A N+NTL+DFRY+ Sbjct: 2 FIDRARIFVQSGKGGDGMSSFRHEKYVPKGGPNGGDGGRGGNVVLVADRNINTLVDFRYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ G KG N+ GA +D+++ VPVGT V +E ++ DL +GQ +I+A GG Sbjct: 62 RLFKAKPGGKGAGSNKYGANADDLIIPVPVGTIVKDEASDKVMADLSFDGQEVIVAAGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF++S N+ P +A G G E+ + L+LK++AD+G++G P+ GKS+ L V+ A Sbjct: 122 GGRGNYHFRTSANRTPTFAEKGEPGVERWLRLELKVLADVGLLGYPSVGKSSILRKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P++A Y FTTL+P LG+V E + F++ADIPG+I+ A +G G+G FL+H ERT VL+ Sbjct: 182 QPEVAAYHFTTLHPILGVVDLEDQRSFVMADIPGLIEGAGEGVGLGHDFLRHVERTKVLV 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQID--TVDSDTLARKKNEL 296 H++ E + A ++ I EL+ Y+ +L KK +IV ++ID T D + L R K + Sbjct: 242 HVLDIAETEGRDAVEDFETINAELAKYSEKLAKKKQIVAANKIDLLTEDDEKLKRLKKYM 301 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 Q +V + +++G G+ ++LE +++++ GE E Sbjct: 302 NEQDIEV-YPVCAVSGEGLHELLE----RVWTLIGEYE 334 >gi|317181647|dbj|BAJ59431.1| GTPase ObgE [Helicobacter pylori F57] Length = 360 Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 154/330 (46%), Positives = 210/330 (63%), Gaps = 12/330 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLAGFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF +D + L DL + +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCAGKKGEDKIIVVPPGTQVFVDDKLWL--DLVEPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A +G G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASEGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELAT 298 ++ A L+ ++ YQ + EL ++S L K V L++ D V++ D L + Sbjct: 240 FVLDASRLDLGIKEQYQRLRLELEKFSSALANKPFGVLLNKCDVVENIDELTKD------ 293 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFS 328 C + E + G+ L LH + S Sbjct: 294 FCAFLNLEAQKLEAFGLEPYLGFLHPHLTS 323 >gi|255551689|ref|XP_002516890.1| Spo0B-associated GTP-binding protein, putative [Ricinus communis] gi|223543978|gb|EEF45504.1| Spo0B-associated GTP-binding protein, putative [Ricinus communis] Length = 637 Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 138/335 (41%), Positives = 209/335 (62%), Gaps = 1/335 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+ D AK+Y+++GDGG G ++FRREKF+ GGP GG GGRGG+V+++ ++N+L+ FR Sbjct: 181 MRCFDTAKIYVKAGDGGNGVVAFRREKFVPLGGPSGGDGGRGGNVYVEVEGSMNSLLPFR 240 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + HF+A G G ++GAKGEDVV+ VP GT + E ++ +L GQ+ +L PG Sbjct: 241 NRVHFRAGRGSHGQGSMQNGAKGEDVVVKVPPGTVIREAGKAEVLLELLDAGQKALLLPG 300 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FKS TN+ P A G G E + L+LKL+AD+GI+G PNAGKST L+ ++ Sbjct: 301 GRGGRGNAAFKSGTNKVPRIAENGEEGVEMWLELELKLVADVGIVGAPNAGKSTLLSVIS 360 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P IA+YPFTTL PNLG+V Y ++AD+PG+++ AH+G G+G FL+HTER V Sbjct: 361 AAQPAIANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSV 420 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V + + + + EL ++ E+ +K IV +++D D+ E Sbjct: 421 LVHVVDGSSQQPEFEFDAVRLELELFSPEIAEKPFIVAYNKMDLPDAYENWSSFMEQLEA 480 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 G F S++ G Q++ ++ + + N+ Sbjct: 481 RGIKTFCMSAVKKEGTRQVICAAYELLRKSKDANQ 515 >gi|254495267|ref|ZP_05108191.1| GTP-binding protein [Polaribacter sp. MED152] gi|85819621|gb|EAQ40778.1| GTP-binding protein [Polaribacter sp. MED152] Length = 329 Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 143/328 (43%), Positives = 209/328 (63%), Gaps = 7/328 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y SG GG G REK+I GGPDGG GGRGG + ++ N+ TL +++ Sbjct: 6 FVDYIKIYASSGKGGQGSAHLHREKYITKGGPDGGDGGRGGHIILRGDKNMWTLFHLKFK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HF+A+ G G K +G+ GED+ + VP+GT + + D +I ++ ++ + +IL GG Sbjct: 66 RHFRAEGGGAGSKSRSTGSDGEDIYVDVPLGTIIKDADTDEVIVEITEDKKEVILLRGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FKSSTNQ P YA PG+ G E ++LKL+AD+G++G PNAGKST L+ +T A Sbjct: 126 GGLGNWNFKSSTNQTPRYAQPGMDGAEGWFRIELKLLADVGLVGFPNAGKSTLLSVLTAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLGIV+ ++ F++ADIPGII+ A +G G+G RFL+H ER LL Sbjct: 186 KPKIADYAFTTLKPNLGIVEHRNHQTFVMADIPGIIEGAAEGKGLGHRFLRHIERNSALL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A +++ Y+ +L+EL +N EL K ++ +S+ D +D + A K EL G Sbjct: 246 FLIPADADDINKEYEILLNELKKHNPELLDKDRLLAISKSDMLDDELQAEIKAELPK--G 303 Query: 302 QVPFEFSSITGHGIPQILECLHDKIFSI 329 SS+ G L+ L DK++ + Sbjct: 304 VDALFISSVAQQG----LQELKDKLWKM 327 >gi|163942189|ref|YP_001647073.1| GTPase ObgE [Bacillus weihenstephanensis KBAB4] gi|229013656|ref|ZP_04170785.1| Spo0B-associated GTP-binding protein [Bacillus mycoides DSM 2048] gi|229062135|ref|ZP_04199459.1| Spo0B-associated GTP-binding protein [Bacillus cereus AH603] gi|229135266|ref|ZP_04264062.1| Spo0B-associated GTP-binding protein [Bacillus cereus BDRD-ST196] gi|229169183|ref|ZP_04296897.1| Spo0B-associated GTP-binding protein [Bacillus cereus AH621] gi|261266748|sp|A9VIR5|OBG_BACWK RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|163864386|gb|ABY45445.1| GTP-binding protein Obg/CgtA [Bacillus weihenstephanensis KBAB4] gi|228614249|gb|EEK71360.1| Spo0B-associated GTP-binding protein [Bacillus cereus AH621] gi|228648191|gb|EEL04230.1| Spo0B-associated GTP-binding protein [Bacillus cereus BDRD-ST196] gi|228717118|gb|EEL68794.1| Spo0B-associated GTP-binding protein [Bacillus cereus AH603] gi|228747578|gb|EEL97452.1| Spo0B-associated GTP-binding protein [Bacillus mycoides DSM 2048] Length = 427 Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 137/322 (42%), Positives = 209/322 (64%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFVVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL Q ++A GG Sbjct: 62 RHFKADRGQHGMSKGQHGRKSEDLIVKVPPGTIVKDEKTGEILADLVTHEQTAVIARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F ++TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATATNPAPEIAENGEPGQERDVTLELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHSGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE Y I +EL YN L ++ ++V +++D D+ + L K +L Sbjct: 242 HVIDMSGLEGREPYEDYVTINNELKEYNMRLTERPQVVVANKMDMPDAEENLQAFKEKLG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 302 DEVKIFP--ISAVTKQGVRDLL 321 >gi|74316884|ref|YP_314624.1| GTPase ObgE [Thiobacillus denitrificans ATCC 25259] gi|123612128|sp|Q3SKG2|OBG_THIDA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|74056379|gb|AAZ96819.1| putative conserved GTP-binding protein [Thiobacillus denitrificans ATCC 25259] Length = 350 Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 150/334 (44%), Positives = 218/334 (65%), Gaps = 9/334 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +G GG G SFRREK+I GGPDGG GGRGG V+ A N+NTL++FR Sbjct: 1 MKFIDEAKITVLAGKGGDGSASFRREKYIPKGGPDGGDGGRGGSVYAVADRNVNTLVEFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + FKAQ GE G G G+D+ + VPVGT + + ++ DL ++G+ + LA G Sbjct: 61 YTRIFKAQKGENGRGAQCYGKAGDDLTIRVPVGTVFSDVNSGEVVADLAEDGETVCLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+E + L+LK++AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GKGGLGNIHFKSSTNRAPRQHTLGEPGEEWELALELKVLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL PNLG+V+ + + F++ADIPG+I+ A +GAG+G +FL+H +RT + Sbjct: 181 AARPKVADYPFTTLAPNLGVVRVDSERSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDS---DTLARK 292 LLH+V S E ++ I++EL Y+ L +K + L+++D VD + + K Sbjct: 241 LLHLVDISPRWEAGDPVHEARAIVEELRKYDQALYEKPRWLVLNKLDMVDEGEREAVVAK 300 Query: 293 KNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E G V F S++ G G + + D + Sbjct: 301 FVEDYGWNGPV-FAISALDGSGCSALTYAVMDYL 333 >gi|315651838|ref|ZP_07904841.1| Spo0B-associated GTP-binding protein [Eubacterium saburreum DSM 3986] gi|315485840|gb|EFU76219.1| Spo0B-associated GTP-binding protein [Eubacterium saburreum DSM 3986] Length = 425 Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 136/324 (41%), Positives = 206/324 (63%), Gaps = 10/324 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK++I+SG GG G +SFRRE F+ GGPDGG GG+GGD+ + LNTL DFR + Sbjct: 2 FADSAKIFIKSGKGGDGHVSFRRELFVAAGGPDGGDGGKGGDIIFEVDEGLNTLTDFRMK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A GE G KR GA +++ + VP GT + + + +I D+ + +R ++ GG Sbjct: 62 RKYVAGDGEPGGKRKCHGADAKNLTIKVPEGTVIKDFESGKVIADMSGDNKREVILKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GGFGN +F ++T Q P +A PG G+E + L+LK+IAD+G++G PN GKST L+ V+ A Sbjct: 122 GGFGNMNFATATMQVPKFAKPGQPGKEMFVLLELKVIADVGLVGFPNVGKSTLLSRVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL P+LG+V +G F++ADIPG+I+ A +G G+G FL+H ERT VL+ Sbjct: 182 KPKIANYHFTTLDPHLGVVDVKGAGGFVMADIPGLIEGASEGVGLGHDFLRHIERTKVLV 241 Query: 242 HIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKNE 295 H+V A + + I++EL Y+ L + +++ ++ID + ++D++ R K Sbjct: 242 HVVDAASTEGRDPVEDIKTIINELKNYDESLLGRPQVIAANKIDAIYSEENDSIKRIKEA 301 Query: 296 LATQCGQVPFEFSSITGHGIPQIL 319 F S ++G GIP++L Sbjct: 302 FPDIK---VFPISGVSGKGIPELL 322 >gi|160892672|ref|ZP_02073462.1| hypothetical protein CLOL250_00202 [Clostridium sp. L2-50] gi|156865713|gb|EDO59144.1| hypothetical protein CLOL250_00202 [Clostridium sp. L2-50] Length = 429 Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 148/331 (44%), Positives = 212/331 (64%), Gaps = 7/331 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D A+++IR+G GG G +SFRREK++ GGPDGG GG+GGDV LNTL DFR+ Sbjct: 2 FADRARIFIRAGKGGDGHVSFRREKYVPDGGPDGGDGGKGGDVIFVVDEGLNTLTDFRHI 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++AQ GE G KRN GA G DVVL VP GT + + + +I D+ + + ++L GG Sbjct: 62 TKYRAQDGEPGGKRNCHGANGADVVLKVPPGTVIKDSETGKVILDMADKKEPVVLLKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN ++ +ST QAP YA PG +E I+ L+LK IAD+G++G P+ GKSTFLA VT A Sbjct: 122 GGRGNRNYVTSTMQAPKYAQPGQPAKELIVDLELKCIADVGLVGFPSVGKSTFLARVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V G + F++ADIPGII+ A +G G+G FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTLTPNLGVVDLGEHNGFVIADIPGIIEGAAEGVGLGLEFLRHIERTKVII 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS---DTLARKKNE 295 HIV A + + I +EL YN ++ + ++ ++ID +D +T+ E Sbjct: 242 HIVDAASIDGRDPVNDVKIINEELKKYNKDIESRPTVIAANKIDALDEIGYETVIEMLKE 301 Query: 296 LATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + G F S+++G GI ++L ++D + Sbjct: 302 EFEKDGVKIFPISAVSGKGISELLWYVNDLV 332 >gi|123967775|ref|YP_001008633.1| GTPase ObgE [Prochlorococcus marinus str. AS9601] gi|261277679|sp|A2BP15|OBG_PROMS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|123197885|gb|ABM69526.1| GTP1/OBG family [Prochlorococcus marinus str. AS9601] Length = 327 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 133/290 (45%), Positives = 194/290 (66%), Gaps = 1/290 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A + +++G GG G +SFRREKF+ GGP GG+GGRGG V + A +NL TL+DF+ Sbjct: 1 MQFIDQANIILKAGKGGNGIVSFRREKFVPAGGPSGGNGGRGGSVILMADNNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ G KG RSGA GED +L VP GT++ + ++ DL + Q + +A G Sbjct: 61 FKREIIAEDGCKGGPNKRSGASGEDTILKVPCGTEIRDIKTGIILGDLTKHKQSLTIAIG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA++ S+ N+AP G G+ + L+LKL+A++GIIGLPNAGKST ++ V+ Sbjct: 121 GRGGHGNAYYLSNQNRAPESFTEGKDGEIWEVQLELKLLAEVGIIGLPNAGKSTLISVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL PNLG+V++ + ADIPG+I A G G+G FL+H +RT + Sbjct: 181 SARPKIANYPFTTLIPNLGVVRKIDGNGCLFADIPGLISGAADGVGLGHDFLRHIQRTKI 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 L+H++ A+ EN ++ I EL Y L K I+ L++I+ VD D L Sbjct: 241 LVHLIDAIAENPLHDFEIIEQELKKYGKGLLDKERIIVLNKIELVDDDYL 290 >gi|125972687|ref|YP_001036597.1| GTP1/OBG subdomain-containing protein [Clostridium thermocellum ATCC 27405] gi|256004845|ref|ZP_05429819.1| GTP-binding protein Obg/CgtA [Clostridium thermocellum DSM 2360] gi|261266744|sp|A3DBS5|OBG_CLOTH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|125712912|gb|ABN51404.1| GTP1/OBG subdomain containing protein [Clostridium thermocellum ATCC 27405] gi|255991155|gb|EEU01263.1| GTP-binding protein Obg/CgtA [Clostridium thermocellum DSM 2360] gi|316941078|gb|ADU75112.1| GTP-binding protein Obg/CgtA [Clostridium thermocellum DSM 1313] Length = 424 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 142/322 (44%), Positives = 209/322 (64%), Gaps = 6/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A++YI++GDGG G ISF REK+I GGPDGG GG+GGDV L TL DFRY+ Sbjct: 2 FVDRARIYIKAGDGGDGAISFHREKYISKGGPDGGDGGKGGDVIFVVDEGLRTLQDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++A+ G+ G N SG GED+++ VP GT V +E ++ DL + G+++++A GG Sbjct: 62 TRYRAEDGQNGGSSNCSGRSGEDLIIKVPPGTLVKDEQTGRILADLVKPGKKVVIAKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + T Q P +A PG G+E + L+LKL+AD+G+IG PN GKST L+ VT A Sbjct: 122 GGAGNQHFATPTRQVPSFAKPGEPGEELWVILELKLLADVGLIGFPNVGKSTILSMVTAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V + F++ADIPG+I+ AHQG G+G FLKH ERT +L+ Sbjct: 182 QPKIANYHFTTINPNLGVVNIDAENAFVMADIPGLIEGAHQGVGLGHEFLKHIERTKLLI 241 Query: 242 HIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 H+V S + VQ ++ I +EL YN L ++ +I+ +++D ++ K ++ Sbjct: 242 HVVDISGSEGRDPVQ-DFEVINEELKKYNPVLCERPQIIAANKMDVTGAEENLEKFRKVI 300 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 G F S+ + G+ +++ Sbjct: 301 EPRGYKIFPVSAASNKGLKELI 322 >gi|297245652|ref|ZP_06929517.1| GTP-binding protein [Staphylococcus aureus A8796] gi|297177303|gb|EFH36555.1| GTP-binding protein [Staphylococcus aureus A8796] Length = 430 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 139/330 (42%), Positives = 208/330 (63%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVVFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE G N G ED+VL VP GT + + ++ DL ++GQR ++A GG Sbjct: 62 RHFKASKGENGQSSNMHGKNAEDLVLKVPPGTIIKNAETDEVLADLVEDGQRAVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDQRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 H++ S E ++ Y+ I EL+AY L + +IV +++D +S D L K E+ Sbjct: 242 HMIDMSGSEGREPIE-DYKVINQELAAYEQRLEDRPQIVVANKMDLPESQDNLNLFKEEI 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +P S+IT I Q+L + DK+ Sbjct: 301 GEDVPVIP--VSTITRDNIDQLLYAIADKL 328 >gi|308063165|gb|ADO05052.1| GTPase ObgE [Helicobacter pylori Sat464] Length = 360 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 152/330 (46%), Positives = 210/330 (63%), Gaps = 12/330 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF +D + L DL + +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCAGKKGEDKIIVVPPGTQVFVDDALWL--DLVEPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A +G G+G FLKH ERT +L Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASEGKGLGISFLKHIERTKILA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELAT 298 ++ A L+ ++ YQ + EL ++ L K V L++ D V++ D +A+ Sbjct: 240 FVLDASRLDLGIKEQYQRLRLELEKFSPALANKPFGVLLNKCDVVENIDEMAKD------ 293 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFS 328 C + E + G+ L LH + S Sbjct: 294 FCTFLNLEAQKLEAFGLEPYLGFLHPHLTS 323 >gi|167749983|ref|ZP_02422110.1| hypothetical protein EUBSIR_00951 [Eubacterium siraeum DSM 15702] gi|167657004|gb|EDS01134.1| hypothetical protein EUBSIR_00951 [Eubacterium siraeum DSM 15702] gi|291530525|emb|CBK96110.1| Obg family GTPase CgtA [Eubacterium siraeum 70/3] gi|291557885|emb|CBL35002.1| Obg family GTPase CgtA [Eubacterium siraeum V10Sc8a] Length = 424 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 133/323 (41%), Positives = 210/323 (65%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+YI++G+GG G +SF REK++ GGPDGG GG+G D+ A NL+TLIDFRY+ Sbjct: 2 FVDIVKIYIKAGNGGNGAVSFHREKYVNAGGPDGGDGGKGSDIVFVADDNLSTLIDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A +GE G R +G E V+ VP GT V + D ++ D+ + + +++A GG Sbjct: 62 KKYIAPNGENGGARRCTGKSAEPTVIRVPRGTLVKDSDTGRILADI-SDNEPVVVAKGGR 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +F + T Q P +A PG G+E + L+LKL+AD+G++G PN GKSTF++ V+ A Sbjct: 121 GGKGNMNFATPTRQIPRFAKPGYPGEEFNVTLELKLLADVGLVGFPNVGKSTFISVVSAA 180 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIA+Y FTT+ P LG+V G K F++ADIPG+I+ A +G G+G FL+H ER +++H Sbjct: 181 KPKIANYHFTTITPVLGVVTVGEKSFVMADIPGLIEGASEGIGLGHSFLRHVERCRLIVH 240 Query: 243 I--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 + VS +E + + ++ I EL ++ E+ ++ +IV +++ D + +A+ + + + Sbjct: 241 VVDVSGIEGRDPEDDFEKINYELKNFSEEISERPQIVVMNKCDLASEEQIAKFRKYIEDK 300 Query: 300 CGQVPFEFSSITGHGIPQILECL 322 G FE S+ T G Q++E + Sbjct: 301 -GLPCFECSAATTKGTAQVIEYI 322 >gi|116622266|ref|YP_824422.1| GTPase ObgE [Candidatus Solibacter usitatus Ellin6076] gi|122254210|sp|Q022G3|OBG_SOLUE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|116225428|gb|ABJ84137.1| small GTP-binding protein [Candidatus Solibacter usitatus Ellin6076] Length = 337 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 146/331 (44%), Positives = 214/331 (64%), Gaps = 6/331 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE ++ +++GDGG G ++FRREKF+ GGP GG GGRGGDV + + + NTL+ FR+ Sbjct: 2 FIDEVRILVKAGDGGNGCLAFRREKFVPRGGPSGGDGGRGGDVTLVCSEHANTLLQFRFN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 KA+ G G R+GA+G + + VPVGT V++E + D G+R ++A GG Sbjct: 62 PEHKAERGRHGEGSQRTGAEGRSIDVAVPVGTVVYDEATGERLYDFTVPGERFVVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + T+QAP PG G+EK + L+LKL+AD+G++G PNAGKST ++ ++ A Sbjct: 122 GGRGNQHFATPTHQAPTEHEPGRPGEEKRLRLELKLLADVGLVGFPNAGKSTLISRISAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA YPFTTL PNLG+V+ EG++ F++ADIPGII+ AH+G G+G +FL+H ERT +L Sbjct: 182 KPKIAAYPFTTLEPNLGVVQMEGFRSFVVADIPGIIEGAHEGHGLGIQFLRHIERTRLLA 241 Query: 242 HIVSALEEN----VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 H+V EE+ VQ ++ I+ EL+ ++ +L K IV +++D +LA Sbjct: 242 HLVDVSEESGRDPVQ-DFEIIMQELARFSDQLVAKPMIVVATKMDVAQDPARVEALRDLA 300 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 FE SS TG GI + + D++ + Sbjct: 301 KSRDLPFFEISSATGQGIDALKHAMADRVLA 331 >gi|315586296|gb|ADU40677.1| obg family GTPase CgtA [Helicobacter pylori 35A] Length = 360 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 152/325 (46%), Positives = 207/325 (63%), Gaps = 12/325 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF +D + L DL + +R++ GG Sbjct: 62 KHHKAKNGTPGGTRNCTGKKGEDKIIVVPPGTQVFVDDALWL--DLVEPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A +G G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASEGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELAT 298 ++ A L+ ++ YQ + EL ++ L K V L++ D V++ D L + Sbjct: 240 FVLDASRLDLGIKEQYQRLRLELEKFSPALANKPFGVLLNKCDVVENIDELTKD------ 293 Query: 299 QCGQVPFEFSSITGHGIPQILECLH 323 C + E + G+ L LH Sbjct: 294 FCAFLNLEAQKLEAFGLEPYLGFLH 318 >gi|149276000|ref|ZP_01882145.1| GTP-binding protein [Pedobacter sp. BAL39] gi|149233428|gb|EDM38802.1| GTP-binding protein [Pedobacter sp. BAL39] Length = 334 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 136/326 (41%), Positives = 203/326 (62%), Gaps = 4/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ RSG GGAG R+ GGPDGG GGRGG + ++ + TL+ +Y+ Sbjct: 7 FVDYVKICCRSGKGGAGSAHLHRDIRTSTGGPDGGDGGRGGHIILRGNAQFWTLLHLKYR 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+ GE G +G +G+D +L VP+GT + + +I ++ ++G+ +L PGG Sbjct: 67 KHIIAKDGEPGSSGTSTGKQGKDEILDVPLGTIAKDAETGEVIFEITEDGETRVLTPGGR 126 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+ T Q P +A PG G+E+ + L+LK++AD+G++G PNAGKST L+ ++ A Sbjct: 127 GGLGNWHFKTPTLQTPRFAQPGEPGKEEWMVLELKVLADVGLVGFPNAGKSTLLSVLSAA 186 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IADYPFTTL PNLGIV G K F++ADIPGII+ A +G G+G RFL+H ER VLL Sbjct: 187 KPEIADYPFTTLVPNLGIVSYRGGKSFVMADIPGIIEGASKGKGLGYRFLRHIERNSVLL 246 Query: 242 HIVSA-LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +V A + +++ Y+ + EL YN EL +K I+ +++ D +D + K +L Sbjct: 247 FMVPADTQRSIKEEYEILKSELQDYNPELMQKPHILAVTKSDMLDEELTEEMKKDLP--A 304 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 G SS+ G+ ++ + L I Sbjct: 305 GIPSIFISSVAQKGLTELKDMLWAAI 330 >gi|217031531|ref|ZP_03437036.1| hypothetical protein HPB128_21g89 [Helicobacter pylori B128] gi|298736750|ref|YP_003729280.1| GTPase ObgE [Helicobacter pylori B8] gi|216946731|gb|EEC25327.1| hypothetical protein HPB128_21g89 [Helicobacter pylori B128] gi|298355944|emb|CBI66816.1| GTPase ObgE [Helicobacter pylori B8] Length = 360 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 148/293 (50%), Positives = 199/293 (67%), Gaps = 6/293 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEITIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF D + L DL + +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCTGKKGEDKIIVVPPGTQVFVGDKLWL--DLVEPKKRVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A QG G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASQGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLAR 291 ++ A L+ ++ YQ + EL ++S L K V L++ D V++ D +A+ Sbjct: 240 FVLDASRLDLGMKEQYQRLRLELEKFSSALANKPFGVLLNKCDVVENIDEMAK 292 >gi|331089608|ref|ZP_08338507.1| GTPase obg [Lachnospiraceae bacterium 3_1_46FAA] gi|330404976|gb|EGG84514.1| GTPase obg [Lachnospiraceae bacterium 3_1_46FAA] Length = 427 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 150/325 (46%), Positives = 207/325 (63%), Gaps = 10/325 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+YIRSG GG G SFRRE ++ GGPDGG GGRGGD+ LNTL+D+R++ Sbjct: 2 FADRAKIYIRSGKGGDGHCSFRRELYVPNGGPDGGDGGRGGDLIFAIDEGLNTLVDYRHK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A GE G KR G G+D++L VP GT + E +I D+ + +R I+ GG Sbjct: 62 RKYAAGDGEPGGKRRCHGKDGKDLILYVPEGTVIKEAVTGKVIADMSGDNRRQIVLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST Q P YA PG +E + L+LK+IAD+G+IG PN GKST L+ VT A Sbjct: 122 GGLGNQHFATSTMQVPKYAQPGQPARELEVKLELKVIADVGLIGFPNVGKSTLLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V EG K F++ADIPG+I+ A +G G+G FL+H ERT +++ Sbjct: 182 EPKIANYHFTTLSPNLGVVDLEGAKGFVMADIPGLIEGASEGVGLGHEFLRHIERTKLMI 241 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKN 294 H+V A + + Y+ I EL AYN E+ K+ +++ ++ D + D D R K Sbjct: 242 HVVDAAGTEGRDPIDDIYK-INAELEAYNPEIAKRPQVIAANKTDLIFEADEDPTERLKK 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQIL 319 E + +V F S +TG GI ++L Sbjct: 301 EFEPKGIKV-FPISGVTGKGISELL 324 >gi|308061655|gb|ADO03543.1| GTPase ObgE [Helicobacter pylori Cuz20] Length = 360 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 152/330 (46%), Positives = 209/330 (63%), Gaps = 12/330 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF +D + L DL + +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCAGKKGEDKIIVVPPGTQVFVDDALWL--DLVEPKKRVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+ Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSAIKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A +G G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASEGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELAT 298 ++ A L+ ++ YQ + EL ++ L K V L++ D V++ D +A+ Sbjct: 240 FVLDASRLDLGIKEQYQRLRLELEKFSPALANKPFGVLLNKCDVVENIDEMAKD------ 293 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFS 328 C + E + G+ L LH + S Sbjct: 294 FCAFLNLEVQKLEAFGLEPYLGFLHPHLTS 323 >gi|323440803|gb|EGA98512.1| GTPase ObgE [Staphylococcus aureus O11] gi|323442848|gb|EGB00473.1| GTPase ObgE [Staphylococcus aureus O46] Length = 430 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 139/330 (42%), Positives = 208/330 (63%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVVFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE G N G ED+VL VP GT + + ++ DL ++GQR ++A GG Sbjct: 62 RHFKASKGENGQSSNMHGKNAEDLVLKVPPGTIIKNVETDEVLADLVEDGQRAVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDQRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 H++ S E ++ Y+ I EL+AY L + +IV +++D +S D L K E+ Sbjct: 242 HMIDMSGSEGREPIE-DYKVINQELAAYEQRLEDRPQIVVANKMDLPESQDNLILFKEEI 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +P S+IT I Q+L + DK+ Sbjct: 301 GEDVPVIP--VSTITRENIDQLLYAIADKL 328 >gi|28211676|ref|NP_782620.1| GTPase ObgE [Clostridium tetani E88] gi|81841155|sp|Q892N8|OBG_CLOTE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|28204118|gb|AAO36557.1| GTP-binding protein [Clostridium tetani E88] Length = 425 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 141/332 (42%), Positives = 215/332 (64%), Gaps = 5/332 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK+Y++SGDGG G +SFRREK++ GGPDGG GG+GGD+ + + ++ TL+DF Y+ Sbjct: 2 FIDKAKIYVKSGDGGNGSVSFRREKYVPLGGPDGGDGGKGGDIVLVSDPDMTTLLDFSYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA GE G + G ED+ + VP+GT V E ++ DL E ++++ GG Sbjct: 62 RKYKADAGEGGSRSRSYGKDAEDLYIKVPMGTVVKEASTGKIMADLSHENDKVVVVKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F ++T QAP +A PG+ G+E+ I L+LKL+AD+G++G PN GKST L++V+ A Sbjct: 122 GGRGNARFATATRQAPNFAEPGMPGEEREIILELKLLADVGLVGFPNVGKSTILSTVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+ +G + F++ADIPGII+ A +G G+G FL+H ERT VL+ Sbjct: 182 KPKIANYHFTTLKPNLGVASIKGLEPFVIADIPGIIEGASEGVGLGLDFLRHIERTRVLI 241 Query: 242 HIVSALEENVQAAYQCIL---DELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ + Y+ L +EL Y+ +L + +IV ++ D V D + E Sbjct: 242 HVIDISGIEGRDPYEDFLKINEELKNYSVKLWDRPQIVAANKSDLVAEDKRFEEFKEKIQ 301 Query: 299 QCGQVP-FEFSSITGHGIPQILECLHDKIFSI 329 + G F+ S+ TG GI +++ + + +I Sbjct: 302 KLGDYKIFKISAATGEGIKELMAEVSKTLATI 333 >gi|322385763|ref|ZP_08059407.1| Spo0B-associated GTP-binding protein [Streptococcus cristatus ATCC 51100] gi|321270501|gb|EFX53417.1| Spo0B-associated GTP-binding protein [Streptococcus cristatus ATCC 51100] Length = 436 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 146/329 (44%), Positives = 210/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GGRGGDV L TL+DFRY Sbjct: 4 FLDTAKIQVKAGKGGDGMVAFRREKYVPNGGPWGGDGGRGGDVIFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + +I DL + GQR ++A GG Sbjct: 64 RHFKAQSGEKGMTKGMHGRGAEDLIIRVPQGTTVRDAETGKVITDLIEHGQRFVVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNSAPEISENGEPGQERELLLELKVLADVGLVGFPSVGKSTLLSVITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D DS + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPDSAENLKEFKQKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+T G+ +L+ Sbjct: 304 ANYDEFEELPQIFPISSLTKQGLATLLDA 332 >gi|169829386|ref|YP_001699544.1| Spo0B-associated GTP-binding protein [Lysinibacillus sphaericus C3-41] gi|168993874|gb|ACA41414.1| Spo0B-associated GTP-binding protein [Lysinibacillus sphaericus C3-41] Length = 282 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 123/273 (45%), Positives = 182/273 (66%), Gaps = 4/273 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y++ GDGG G ++FRREK++ GGP GG GG GG+V + L TL+DFRY+ Sbjct: 2 FVDHVKIYVKGGDGGDGMVAFRREKYVPNGGPAGGDGGHGGNVVFEVEEGLRTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM + G ED+++ VP GT V E+ ++I DL + GQR ++A G Sbjct: 62 RHFKAPRGEHGMSKGMHGKNAEDLIVKVPPGTVVMNEETNAVIADLVEHGQRAVIAKAGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP + G GQE + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATPANPAPELSEKGEPGQELNVILELKVLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+++ + ++ F +AD+PG+I+ AH+G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIVPNLGMIETDDHRSFAMADLPGLIEGAHEGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRK 271 H++ S +E + Y I +EL YN L + Sbjct: 242 HVIDMSGMEGRDPYEDYLTINEELKQYNLRLTR 274 >gi|15924634|ref|NP_372168.1| GTPase ObgE [Staphylococcus aureus subsp. aureus Mu50] gi|15927224|ref|NP_374757.1| GTPase ObgE [Staphylococcus aureus subsp. aureus N315] gi|21283323|ref|NP_646411.1| GTPase ObgE [Staphylococcus aureus subsp. aureus MW2] gi|49486477|ref|YP_043698.1| GTPase ObgE [Staphylococcus aureus subsp. aureus MSSA476] gi|87161323|ref|YP_494295.1| GTPase ObgE [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195455|ref|YP_500259.1| GTPase ObgE [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268124|ref|YP_001247067.1| GTPase ObgE [Staphylococcus aureus subsp. aureus JH9] gi|150394192|ref|YP_001316867.1| GTPase ObgE [Staphylococcus aureus subsp. aureus JH1] gi|151221758|ref|YP_001332580.1| GTPase ObgE [Staphylococcus aureus subsp. aureus str. Newman] gi|156979962|ref|YP_001442221.1| GTPase ObgE [Staphylococcus aureus subsp. aureus Mu3] gi|161509870|ref|YP_001575529.1| GTPase ObgE [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221141087|ref|ZP_03565580.1| GTPase ObgE [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253317205|ref|ZP_04840418.1| GTPase ObgE [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732300|ref|ZP_04866465.1| GTPase ObgE [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|255006429|ref|ZP_05145030.2| GTPase ObgE [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793717|ref|ZP_05642696.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus A9781] gi|258410984|ref|ZP_05681264.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus A9763] gi|258420215|ref|ZP_05683170.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus A9719] gi|258438217|ref|ZP_05689501.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus A9299] gi|258443680|ref|ZP_05692019.1| GTPase ObgE [Staphylococcus aureus A8115] gi|258446887|ref|ZP_05695041.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus A6300] gi|258448801|ref|ZP_05696913.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus A6224] gi|258450530|ref|ZP_05698592.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus A5948] gi|258453757|ref|ZP_05701732.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus A5937] gi|262048633|ref|ZP_06021516.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus D30] gi|262051294|ref|ZP_06023518.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus 930918-3] gi|269203269|ref|YP_003282538.1| GTPase ObgE [Staphylococcus aureus subsp. aureus ED98] gi|282893148|ref|ZP_06301382.1| GTP-binding protein [Staphylococcus aureus A8117] gi|282920193|ref|ZP_06327918.1| GTP-binding protein [Staphylococcus aureus A9765] gi|282928279|ref|ZP_06335884.1| GTP-binding protein [Staphylococcus aureus A10102] gi|284024700|ref|ZP_06379098.1| GTPase ObgE [Staphylococcus aureus subsp. aureus 132] gi|294848673|ref|ZP_06789419.1| GTP-binding protein [Staphylococcus aureus A9754] gi|295406765|ref|ZP_06816570.1| GTP-binding protein [Staphylococcus aureus A8819] gi|296275929|ref|ZP_06858436.1| GTPase ObgE [Staphylococcus aureus subsp. aureus MR1] gi|297207635|ref|ZP_06924070.1| obg family GTPase CgtA [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911718|ref|ZP_07129161.1| obg family GTPase CgtA [Staphylococcus aureus subsp. aureus TCH70] gi|304380759|ref|ZP_07363427.1| obg family GTPase CgtA [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|81827842|sp|Q6G8S5|OBG_STAAS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|81832395|sp|Q7A0Q3|OBG_STAAW RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|81832493|sp|Q7A584|OBG_STAAN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|81855922|sp|Q99TK9|OBG_STAAM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|122539355|sp|Q2FXT1|OBG_STAA8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|123485518|sp|Q2FG83|OBG_STAA3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263095|sp|A7X361|OBG_STAA1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263096|sp|A6U2B2|OBG_STAA2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263097|sp|A5ITG8|OBG_STAA9 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263098|sp|A6QHI6|OBG_STAAE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263099|sp|A8Z2H2|OBG_STAAT RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|13701442|dbj|BAB42736.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus N315] gi|14247416|dbj|BAB57806.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus Mu50] gi|21204763|dbj|BAB95459.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus MW2] gi|49244920|emb|CAG43381.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus MSSA476] gi|87127297|gb|ABD21811.1| GTP-binding protein Obg/CgtA [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203013|gb|ABD30823.1| GTP-binding protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741193|gb|ABQ49491.1| GTP-binding protein Obg/CgtA [Staphylococcus aureus subsp. aureus JH9] gi|149946644|gb|ABR52580.1| GTP-binding protein Obg/CgtA [Staphylococcus aureus subsp. aureus JH1] gi|150374558|dbj|BAF67818.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus str. Newman] gi|156722097|dbj|BAF78514.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus Mu3] gi|160368679|gb|ABX29650.1| GTP-binding protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724089|gb|EES92818.1| GTPase ObgE [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257787689|gb|EEV26029.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus A9781] gi|257840134|gb|EEV64598.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus A9763] gi|257843926|gb|EEV68320.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus A9719] gi|257848261|gb|EEV72252.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus A9299] gi|257851086|gb|EEV75029.1| GTPase ObgE [Staphylococcus aureus A8115] gi|257854462|gb|EEV77411.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus A6300] gi|257858079|gb|EEV80968.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus A6224] gi|257861688|gb|EEV84487.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus A5948] gi|257864077|gb|EEV86830.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus A5937] gi|259160931|gb|EEW45951.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus 930918-3] gi|259163280|gb|EEW47839.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus D30] gi|262075559|gb|ACY11532.1| GTPase ObgE [Staphylococcus aureus subsp. aureus ED98] gi|269941129|emb|CBI49515.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus TW20] gi|282590086|gb|EFB95168.1| GTP-binding protein [Staphylococcus aureus A10102] gi|282594541|gb|EFB99526.1| GTP-binding protein [Staphylococcus aureus A9765] gi|282764466|gb|EFC04592.1| GTP-binding protein [Staphylococcus aureus A8117] gi|285817326|gb|ADC37813.1| GTP-binding protein Obg [Staphylococcus aureus 04-02981] gi|294824699|gb|EFG41122.1| GTP-binding protein [Staphylococcus aureus A9754] gi|294968512|gb|EFG44536.1| GTP-binding protein [Staphylococcus aureus A8819] gi|296887652|gb|EFH26550.1| obg family GTPase CgtA [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300885964|gb|EFK81166.1| obg family GTPase CgtA [Staphylococcus aureus subsp. aureus TCH70] gi|302751472|gb|ADL65649.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340696|gb|EFM06628.1| obg family GTPase CgtA [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312830030|emb|CBX34872.1| GTP-binding protein Obg/CgtA [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129929|gb|EFT85919.1| GTPase ObgE [Staphylococcus aureus subsp. aureus CGS03] gi|315198655|gb|EFU28983.1| GTPase ObgE [Staphylococcus aureus subsp. aureus CGS01] gi|320140469|gb|EFW32323.1| Obg family GTPase CgtA [Staphylococcus aureus subsp. aureus MRSA131] gi|320144008|gb|EFW35777.1| Obg family GTPase CgtA [Staphylococcus aureus subsp. aureus MRSA177] gi|329314318|gb|AEB88731.1| GTPase obg [Staphylococcus aureus subsp. aureus T0131] gi|329727117|gb|EGG63573.1| Obg family GTPase CgtA [Staphylococcus aureus subsp. aureus 21172] gi|329728464|gb|EGG64901.1| Obg family GTPase CgtA [Staphylococcus aureus subsp. aureus 21189] gi|329733233|gb|EGG69570.1| Obg family GTPase CgtA [Staphylococcus aureus subsp. aureus 21193] Length = 430 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 139/330 (42%), Positives = 208/330 (63%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVVFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE G N G ED+VL VP GT + + ++ DL ++GQR ++A GG Sbjct: 62 RHFKASKGENGQSSNMHGKNAEDLVLKVPPGTIIKNVETDEVLADLVEDGQRAVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDQRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 H++ S E ++ Y+ I EL+AY L + +IV +++D +S D L K E+ Sbjct: 242 HMIDMSGSEGREPIE-DYKVINQELAAYEQRLEDRPQIVVANKMDLPESQDNLNLFKEEI 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +P S+IT I Q+L + DK+ Sbjct: 301 GEDVPVIP--VSTITRDNIDQLLYAIADKL 328 >gi|49483888|ref|YP_041112.1| GTPase ObgE [Staphylococcus aureus subsp. aureus MRSA252] gi|257425768|ref|ZP_05602192.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257428428|ref|ZP_05604826.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257431066|ref|ZP_05607445.1| GTP-binding protein [Staphylococcus aureus subsp. aureus 68-397] gi|257433752|ref|ZP_05610110.1| GTP-binding protein [Staphylococcus aureus subsp. aureus E1410] gi|257436667|ref|ZP_05612711.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus M876] gi|282904224|ref|ZP_06312112.1| Obg family GTPase CgtA [Staphylococcus aureus subsp. aureus C160] gi|282911280|ref|ZP_06319082.1| obg family GTPase CgtA [Staphylococcus aureus subsp. aureus WBG10049] gi|282914449|ref|ZP_06322235.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus M899] gi|282916912|ref|ZP_06324670.1| GTP-binding protein [Staphylococcus aureus subsp. aureus D139] gi|282919418|ref|ZP_06327153.1| GTP-binding protein [Staphylococcus aureus subsp. aureus C427] gi|282924795|ref|ZP_06332461.1| GTP-binding protein [Staphylococcus aureus subsp. aureus C101] gi|283770718|ref|ZP_06343610.1| GTP-binding protein [Staphylococcus aureus subsp. aureus H19] gi|283958404|ref|ZP_06375855.1| Obg family GTPase CgtA [Staphylococcus aureus subsp. aureus A017934/97] gi|293503522|ref|ZP_06667369.1| GTP-binding protein [Staphylococcus aureus subsp. aureus 58-424] gi|293510541|ref|ZP_06669246.1| GTPase ObgE [Staphylococcus aureus subsp. aureus M809] gi|293537084|ref|ZP_06671764.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus M1015] gi|297590813|ref|ZP_06949451.1| obg family GTPase CgtA [Staphylococcus aureus subsp. aureus MN8] gi|81828003|sp|Q6GG60|OBG_STAAR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|49242017|emb|CAG40715.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257271462|gb|EEV03608.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257275269|gb|EEV06756.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257278269|gb|EEV08911.1| GTP-binding protein [Staphylococcus aureus subsp. aureus 68-397] gi|257281845|gb|EEV11982.1| GTP-binding protein [Staphylococcus aureus subsp. aureus E1410] gi|257284018|gb|EEV14141.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus M876] gi|282313161|gb|EFB43557.1| GTP-binding protein [Staphylococcus aureus subsp. aureus C101] gi|282317228|gb|EFB47602.1| GTP-binding protein [Staphylococcus aureus subsp. aureus C427] gi|282319399|gb|EFB49751.1| GTP-binding protein [Staphylococcus aureus subsp. aureus D139] gi|282321630|gb|EFB51955.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus M899] gi|282324975|gb|EFB55285.1| obg family GTPase CgtA [Staphylococcus aureus subsp. aureus WBG10049] gi|282595842|gb|EFC00806.1| Obg family GTPase CgtA [Staphylococcus aureus subsp. aureus C160] gi|283460865|gb|EFC07955.1| GTP-binding protein [Staphylococcus aureus subsp. aureus H19] gi|283790553|gb|EFC29370.1| Obg family GTPase CgtA [Staphylococcus aureus subsp. aureus A017934/97] gi|290919929|gb|EFD96997.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus M1015] gi|291095188|gb|EFE25453.1| GTP-binding protein [Staphylococcus aureus subsp. aureus 58-424] gi|291466432|gb|EFF08953.1| GTPase ObgE [Staphylococcus aureus subsp. aureus M809] gi|297575699|gb|EFH94415.1| obg family GTPase CgtA [Staphylococcus aureus subsp. aureus MN8] gi|298694923|gb|ADI98145.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus ED133] gi|312437889|gb|ADQ76960.1| obg family GTPase CgtA [Staphylococcus aureus subsp. aureus TCH60] gi|315195547|gb|EFU25934.1| GTPase ObgE [Staphylococcus aureus subsp. aureus CGS00] Length = 430 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 139/330 (42%), Positives = 208/330 (63%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVVFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE G N G ED+VL VP GT + + ++ DL ++GQR ++A GG Sbjct: 62 RHFKASKGENGQSSNMHGKNAEDLVLKVPPGTIIKNVETDEVLADLVEDGQRAVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDQRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 H++ S E ++ Y+ I EL+AY L + +IV +++D +S D L K E+ Sbjct: 242 HMIDMSGSEGREPIE-DYKVINQELAAYEQRLEDRPQIVVANKMDLPESQDNLILFKEEI 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +P S+IT I Q+L + DK+ Sbjct: 301 GEDVPVIP--VSTITRDNIDQLLYAIADKL 328 >gi|308184107|ref|YP_003928240.1| GTPase ObgE [Helicobacter pylori SJM180] gi|308060027|gb|ADO01923.1| GTPase ObgE [Helicobacter pylori SJM180] Length = 360 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 145/287 (50%), Positives = 196/287 (68%), Gaps = 5/287 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL +FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLANFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF +D + L DL +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCAGKKGEDKIIVVPPGTQVFVDDKLWL--DLIAPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A +G G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASEGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 ++ A L+ ++ YQ + EL ++S L K V L++ D V++ Sbjct: 240 FVLDASRLDLGIKEQYQRLRLELEKFSSALANKPFGVLLNKCDVVEN 286 >gi|153814872|ref|ZP_01967540.1| hypothetical protein RUMTOR_01087 [Ruminococcus torques ATCC 27756] gi|145847903|gb|EDK24821.1| hypothetical protein RUMTOR_01087 [Ruminococcus torques ATCC 27756] Length = 451 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 150/325 (46%), Positives = 207/325 (63%), Gaps = 10/325 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+YIRSG GG G SFRRE ++ GGPDGG GGRGGD+ LNTL+D+R++ Sbjct: 26 FADRAKIYIRSGKGGDGHCSFRRELYVPNGGPDGGDGGRGGDLIFAIDEGLNTLVDYRHK 85 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A GE G KR G G+D++L VP GT + E +I D+ + +R I+ GG Sbjct: 86 RKYAAGDGEPGGKRRCHGKDGKDLILYVPEGTVIKEAVTGKVIADMSGDNRRQIVLKGGK 145 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST Q P YA PG +E + L+LK+IAD+G+IG PN GKST L+ VT A Sbjct: 146 GGLGNQHFATSTMQVPKYAQPGQPARELEVKLELKVIADVGLIGFPNVGKSTLLSRVTNA 205 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V EG K F++ADIPG+I+ A +G G+G FL+H ERT +++ Sbjct: 206 EPKIANYHFTTLSPNLGVVDLEGAKGFVMADIPGLIEGASEGVGLGHEFLRHIERTKLMI 265 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKN 294 H+V A + + Y+ I EL AYN E+ K+ +++ ++ D + D D R K Sbjct: 266 HVVDAAGTEGRDPIDDIYK-INAELEAYNPEIAKRPQVIAANKTDLIFEADEDPTERLKK 324 Query: 295 ELATQCGQVPFEFSSITGHGIPQIL 319 E + +V F S +TG GI ++L Sbjct: 325 EFEPKGIKV-FPISGVTGKGISELL 348 >gi|317012144|gb|ADU82752.1| GTPase ObgE [Helicobacter pylori Lithuania75] Length = 360 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 145/287 (50%), Positives = 195/287 (67%), Gaps = 5/287 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GGAG +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGAGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF +D + L DL + +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCAGKKGEDKIIVVPPGTQVFVDDKLWL--DLVEPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A G G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASHGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 ++ A L+ ++ YQ + EL ++ L K V L++ D V++ Sbjct: 240 FVLDASRLDLGIKEQYQRLRLELEKFSPALANKPFGVLLNKCDVVEN 286 >gi|57650525|ref|YP_186538.1| GTPase ObgE [Staphylococcus aureus subsp. aureus COL] gi|81859572|sp|Q5HFB9|OBG_STAAC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|57284711|gb|AAW36805.1| GTP-binding protein, GTP1/OBG family [Staphylococcus aureus subsp. aureus COL] Length = 430 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 139/330 (42%), Positives = 208/330 (63%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVVFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE G N G ED+VL VP GT + + ++ DL ++GQR ++A GG Sbjct: 62 RHFKASKGENGQSSNMHGKNAEDLVLKVPPGTIIKNVETDEVLADLVEDGQRAVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDQRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 H++ S E ++ Y+ I EL+AY L + +IV +++D +S D L K E+ Sbjct: 242 HMIDMSGSEGREPIE-DYKVINQELAAYEQRLEDRPQIVVANKMDLPESQDNLNLFKEEI 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +P S+IT I Q+L + DK+ Sbjct: 301 GEDVPVIP--VSTITRDNIDQLLYAIADKL 328 >gi|229163397|ref|ZP_04291348.1| Spo0B-associated GTP-binding protein [Bacillus cereus R309803] gi|228619966|gb|EEK76841.1| Spo0B-associated GTP-binding protein [Bacillus cereus R309803] Length = 428 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 136/322 (42%), Positives = 209/322 (64%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFVVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL Q ++A GG Sbjct: 62 RHFKADRGQHGMSKGQHGRKSEDLIVKVPPGTVVKDEKTGQILADLVTHEQTAVIARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F ++TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATATNPAPEIAENGEPGQERDVILELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE Y I +EL YN L ++ ++V +++D D+ + L K ++ Sbjct: 242 HVIDMSGLEGREPYEDYVTINNELKEYNMRLTERPQVVVANKMDMPDAEENLQAFKEKVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 302 DEVKIFP--ISAVTKQGVRDLL 321 >gi|258424069|ref|ZP_05686951.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus A9635] gi|257845690|gb|EEV69722.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus A9635] Length = 430 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 139/330 (42%), Positives = 208/330 (63%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVVFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE G N G ED+VL VP GT + + ++ DL ++GQR ++A GG Sbjct: 62 RHFKASKGENGQSSNMHGKNAEDLVLKVPPGTIIKNVETDEVLADLVEDGQRAVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDQRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 H++ S E ++ Y+ I EL+AY L + +IV +++D +S D L K E+ Sbjct: 242 HMIDMSGSEGREPIE-DYKVINQELAAYEQRLEDRPQIVVANKMDLPESPDNLILFKEEI 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +P S+IT I Q+L + DK+ Sbjct: 301 GEDVPVIP--VSTITRDNIDQLLYAIADKL 328 >gi|295428219|ref|ZP_06820851.1| GTP-binding protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|295128577|gb|EFG58211.1| GTP-binding protein [Staphylococcus aureus subsp. aureus EMRSA16] Length = 433 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 139/330 (42%), Positives = 208/330 (63%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 5 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVVFEVDEGLRTLLDFRYQ 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE G N G ED+VL VP GT + + ++ DL ++GQR ++A GG Sbjct: 65 RHFKASKGENGQSSNMHGKNAEDLVLKVPPGTIIKNVETDEVLADLVEDGQRAVVAKGGR 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 125 GGRGNSRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKA 184 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 185 KPKIGAYHFTTIKPNLGVVSTPDQRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 244 Query: 242 HIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 H++ S E ++ Y+ I EL+AY L + +IV +++D +S D L K E+ Sbjct: 245 HMIDMSGSEGREPIE-DYKVINQELAAYEQRLEDRPQIVVANKMDLPESQDNLILFKEEI 303 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +P S+IT I Q+L + DK+ Sbjct: 304 GEDVPVIP--VSTITRDNIDQLLYAIADKL 331 >gi|237739323|ref|ZP_04569804.1| SPO0B-associated GTP-binding protein [Fusobacterium sp. 2_1_31] gi|229422931|gb|EEO37978.1| SPO0B-associated GTP-binding protein [Fusobacterium sp. 2_1_31] Length = 428 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 146/335 (43%), Positives = 220/335 (65%), Gaps = 6/335 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + +++G+GG G +FRREKFI+FGGPDGG GG+GGDV A SN+NTLIDF+++ Sbjct: 2 FIDEVIITVKAGNGGDGSAAFRREKFIQFGGPDGGDGGKGGDVVFVADSNINTLIDFKFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKAQ+GE G K+ G KGED+++ VPVGTQV + LI D++ G++ +L GG Sbjct: 62 KLFKAQNGENGQKKQMYGKKGEDLIIKVPVGTQVRDFTTGKLILDMNVNGEQRVLLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN HFK+S +AP A G G E + L+LKL+AD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGYGNVHFKNSVRKAPKIAEKGGEGAEIKVKLELKLLADVALVGYPSVGKSSFINKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K+ Y FTTL P LG+V+ E K F++ADIPG+I+ AH+G G+GD+FL+H ER ++ Sbjct: 182 NSKVGSYHFTTLEPKLGVVRLEEGKSFVIADIPGLIEGAHEGVGLGDKFLRHIERCKMIY 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 HIV A E + ++ I +EL ++ +L K +IV +++D + D + + K+ LA Sbjct: 242 HIVDAAEIEGRDCIEDFEKINEELRKFSEKLANKKQIVIANKMDLIWDMEKFEKFKSYLA 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + +V + S + G+ +IL +D + I E Sbjct: 302 EKGIEV-YPVSVLLNEGLKEILYKTYDMLSKIERE 335 >gi|261839159|gb|ACX98924.1| GTPase ObgE [Helicobacter pylori 52] Length = 360 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 153/330 (46%), Positives = 210/330 (63%), Gaps = 12/330 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG+G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGSGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLAGFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF +D + L DL + +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCAGKKGEDKIIVVPPGTQVFVDDKLWL--DLVEPKKRVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNVHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A +G G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASEGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELAT 298 ++ A L+ ++ YQ + EL ++S L K V L++ D V++ D L + Sbjct: 240 FVLDASRLDLGIKEQYQRLRLELEKFSSALANKPFGVLLNKCDVVENIDELTKD------ 293 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFS 328 C + E + G+ L LH + S Sbjct: 294 FCAFLNLEAQKLEAFGLEPYLGFLHPHLTS 323 >gi|108562730|ref|YP_627046.1| GTPase ObgE [Helicobacter pylori HPAG1] gi|123073832|sp|Q1CUK0|OBG_HELPH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|107836503|gb|ABF84372.1| GTP-binding protein [Helicobacter pylori HPAG1] Length = 360 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 154/330 (46%), Positives = 208/330 (63%), Gaps = 12/330 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF D + L DL +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCAGKKGEDKIIVVPPGTQVFVGDKLWL--DLITPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A QG G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASQGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELAT 298 ++ A L+ ++ YQ + EL ++ L K V L++ D V++ D +A+ Sbjct: 240 FVLDASRLDLGIKEQYQRLRLELEKFSPALANKPFGVLLNKCDVVENIDKMAKD------ 293 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFS 328 C + E + G+ L LH + S Sbjct: 294 FCAFLNLEAQKLEAFGLEPYLGFLHPHLTS 323 >gi|229105078|ref|ZP_04235729.1| Spo0B-associated GTP-binding protein [Bacillus cereus Rock3-28] gi|228678259|gb|EEL32485.1| Spo0B-associated GTP-binding protein [Bacillus cereus Rock3-28] Length = 428 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 136/322 (42%), Positives = 209/322 (64%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFVVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL Q ++A GG Sbjct: 62 RHFKADRGQHGMSKGQHGRKSEDLIVKVPPGTIVKDEKTGQILADLVTHEQTAVIARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F ++TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATATNPAPEIAENGEPGQERDVILELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE Y I +EL YN L ++ ++V +++D D+ + L K ++ Sbjct: 242 HVIDMSGLEGREPYEDYVTINNELKEYNMRLTERPQVVVANKMDMPDAEENLQTFKEKVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 302 DEVKIFP--ISAVTKQGVRDLL 321 >gi|205356472|ref|ZP_03223236.1| putative GTP binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205345659|gb|EDZ32298.1| putative GTP binding protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 345 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 145/341 (42%), Positives = 218/341 (63%), Gaps = 13/341 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ + SGDGG G +SFRREK + GGPDGG GG GGD+ +N +TL++F+ + Sbjct: 2 FIDSVKITLASGDGGKGAVSFRREKHVPLGGPDGGDGGNGGDIIFVCDNNTHTLVNFKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +AQ+G GM RN++G KGE++ L VP GTQV + ++ DL +EGQR + GG Sbjct: 62 RELRAQNGAGGMGRNKNGKKGENLELIVPEGTQVIDAQTNEILLDLTKEGQRELFLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK +TNQ P YA PGI G+ +++ L+LKLIAD+G++G PN GKST ++ V+ A Sbjct: 122 GGLGNTHFKHATNQRPDYAQPGIKGESRLVRLELKLIADVGLVGFPNVGKSTLISVVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+V + Y F++ADIPGII+ A G G+G FLKH ERT LL Sbjct: 182 KPEIANYEFTTLTPKLGLVDVDEYNSFVMADIPGIIEGASGGKGLGLAFLKHIERTSFLL 241 Query: 242 HIVSALEEN-VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-----SDTLARKKNE 295 ++ + E ++ + + EL +++EL + + +S+ D+V+ ++ +A NE Sbjct: 242 FVLDPMREMPLKEQFIVLRKELEKFSNELFGRKFGIMISKSDSVNLGEEFAEQIALNINE 301 Query: 296 LATQCGQV--PFEF----SSITGHGIPQILECLHDKIFSIR 330 L ++ P F SS+ G+ ++ L ++I ++R Sbjct: 302 LENYLKEINNPQSFLIKVSSLEKTGLKELKFMLLEEIKTLR 342 >gi|228910276|ref|ZP_04074093.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis IBL 200] gi|228849336|gb|EEM94173.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis IBL 200] Length = 428 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 136/322 (42%), Positives = 209/322 (64%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFVVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL Q ++A GG Sbjct: 62 RHFKADRGQHGMSKGQHGRKSEDLIVKVPPGTIVKDEQTGQILADLVTHEQTAVIARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F ++TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATATNPAPEIAENGEPGQERDVILELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE Y I +EL YN L ++ ++V +++D D+ + L K ++ Sbjct: 242 HVIDMSGLEGREPYEDYVTINNELKEYNMRLTERPQVVVANKMDMPDAEENLQAFKEKVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 302 DEVKIFP--ISAVTKQGVRDLL 321 >gi|126173213|ref|YP_001049362.1| GTPase ObgE [Shewanella baltica OS155] gi|152999572|ref|YP_001365253.1| GTPase ObgE [Shewanella baltica OS185] gi|160874191|ref|YP_001553507.1| GTPase ObgE [Shewanella baltica OS195] gi|217974477|ref|YP_002359228.1| GTPase ObgE [Shewanella baltica OS223] gi|304410430|ref|ZP_07392048.1| GTP-binding protein Obg/CgtA [Shewanella baltica OS183] gi|307304522|ref|ZP_07584272.1| GTP-binding protein Obg/CgtA [Shewanella baltica BA175] gi|261263078|sp|B8EC04|OBG_SHEB2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263079|sp|A3D180|OBG_SHEB5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263080|sp|A6WK51|OBG_SHEB8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263081|sp|A9L430|OBG_SHEB9 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|125996418|gb|ABN60493.1| GTP1/OBG sub domain protein [Shewanella baltica OS155] gi|151364190|gb|ABS07190.1| GTP-binding protein Obg/CgtA [Shewanella baltica OS185] gi|160859713|gb|ABX48247.1| GTP-binding protein Obg/CgtA [Shewanella baltica OS195] gi|217499612|gb|ACK47805.1| GTP-binding protein Obg/CgtA [Shewanella baltica OS223] gi|304350914|gb|EFM15314.1| GTP-binding protein Obg/CgtA [Shewanella baltica OS183] gi|306911924|gb|EFN42348.1| GTP-binding protein Obg/CgtA [Shewanella baltica BA175] gi|315266423|gb|ADT93276.1| GTP-binding protein Obg/CgtA [Shewanella baltica OS678] Length = 389 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 140/306 (45%), Positives = 207/306 (67%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG+G +SFRREK++ GGPDGG GG GG V++QA N NTLI+FR Sbjct: 1 MKFVDEAVIRVEAGDGGSGCVSFRREKYVPDGGPDGGDGGDGGSVFLQADENFNTLIEFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ GE G R+ +G G+D++L VPVGT+ + D ++ DL GQ++++A G Sbjct: 61 FERFHMAERGENGRGRDCTGHSGKDLILKVPVGTRAVDHDTEEVLGDLTTHGQKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSTNRAPRQKTLGTPGEVRSLKLELLLLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 RA PK+ADYPFTTL PNLG+V + F++ADIPG+I+ A GAG+G RFLKH ER + Sbjct: 181 RATPKVADYPFTTLVPNLGVVNPRPGQSFVIADIPGLIEGAADGAGLGIRFLKHLERCRI 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHI+ + V++A + I+ EL Y+ +L K + ++ D + + L +K + Sbjct: 241 LLHIIDIEPIDGTDPVESA-RAIVGELEKYSPKLASKPRWLVFNKTDLLLEEELQQKVDR 299 Query: 296 LATQCG 301 + + G Sbjct: 300 IVKEMG 305 >gi|293376494|ref|ZP_06622723.1| Obg family GTPase CgtA [Turicibacter sanguinis PC909] gi|325842010|ref|ZP_08167547.1| Obg family GTPase CgtA [Turicibacter sp. HGF1] gi|292644916|gb|EFF62997.1| Obg family GTPase CgtA [Turicibacter sanguinis PC909] gi|325489732|gb|EGC92088.1| Obg family GTPase CgtA [Turicibacter sp. HGF1] Length = 427 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 136/322 (42%), Positives = 205/322 (63%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ + +GDGG G ++FRREK+I GGP GG GG GG V A L+TL+D RY Sbjct: 2 FIDQVKIKVTAGDGGNGAVAFRREKYIANGGPAGGDGGNGGSVVFVADEGLSTLLDLRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + A++GE GM ++ G +D+++ VPVGT V++ +I DL + GQR ++A GG Sbjct: 62 RVLAAKNGENGMAKSCHGKNSDDLIVKVPVGTIVYDTSTNLIIADLTENGQRAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + N AP A G LGQ++ I ++LK++AD+G++G P+ GKST ++ V+ Sbjct: 122 GGRGNIHFATPRNTAPELAENGELGQKREIRVELKVLADVGLVGFPSVGKSTLISVVSAC 181 Query: 183 KPKIADYPFTTLYPNLGI--VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA Y FTTL PNLG+ V +G + F++AD+PG+I+ A GAG+G +FL+H ERT V+ Sbjct: 182 KPKIAAYHFTTLVPNLGVVGVPDG-RSFVMADLPGLIEGAASGAGLGHQFLRHIERTRVI 240 Query: 241 LHIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH++ S +E + Y I +EL Y +L ++ +I+ +++D D++ R E Sbjct: 241 LHVIDMSGMEGRDPYEDYVTINNELGQYRYKLLERPQIIVANKMDNPDAEENLRIFKEKV 300 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + E S+ T GI Q+L Sbjct: 301 GDDVTI-VEISAATRQGIDQLL 321 >gi|283955419|ref|ZP_06372917.1| GTP-binding protein, GTP1/Obg family [Campylobacter jejuni subsp. jejuni 414] gi|283793046|gb|EFC31817.1| GTP-binding protein, GTP1/Obg family [Campylobacter jejuni subsp. jejuni 414] Length = 348 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 148/345 (42%), Positives = 221/345 (64%), Gaps = 15/345 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ + SGDGG G +SFRREK + GGPDGG GG GGD+ +N +TL++F+ + Sbjct: 2 FIDSVKITLASGDGGKGAVSFRREKHVPLGGPDGGDGGNGGDIIFVCDNNTHTLVNFKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +AQ+G GM RN++G KGE++ L VP GTQV + ++ DL +EGQR + GG Sbjct: 62 RELRAQNGVGGMGRNKNGKKGENLELIVPEGTQVIDAQTNEILLDLTKEGQRELFLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK +TNQ P YA PGI G+ +++ L+LKLIAD+G++G PN GKST ++ V+ A Sbjct: 122 GGLGNTHFKHATNQRPDYAQPGIKGESRLVRLELKLIADVGLVGFPNVGKSTLISVVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+V + Y F++ADIPGII+ A G G+G FLKH ERT LL Sbjct: 182 KPEIANYEFTTLTPKLGLVDVDEYNSFVMADIPGIIEGASGGKGLGLAFLKHIERTSFLL 241 Query: 242 HIVSALEEN-VQAAYQCILDELSAYNSEL-RKKIEIVGLSQIDTVD-----SDTLARKKN 294 ++ + E ++ + + EL +++EL R+K I+ +S+ D+V+ + +A + Sbjct: 242 FVLDPMREMLLKEQFIVLRKELEKFSNELFRRKFGIM-VSKSDSVNLGEEFAKQIALNIS 300 Query: 295 ELATQCGQV--PFEF----SSITGHGIPQILECLHDKIFSIRGEN 333 EL ++ P F SS+ G+ ++ L ++I ++R N Sbjct: 301 ELENYLKEINSPQSFLIKVSSLEKTGLKELKFMLLEEIKALRNTN 345 >gi|253733105|ref|ZP_04867270.1| spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus TCH130] gi|253728861|gb|EES97590.1| spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus TCH130] Length = 430 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 139/330 (42%), Positives = 208/330 (63%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVVFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE G N G ED+VL VP GT + + ++ DL ++GQR ++A GG Sbjct: 62 RHFKASKGENGQSSNMHGKNAEDLVLKVPPGTIIKNVETDEVLADLVEDGQRAVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDQRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 H++ S E ++ Y+ I EL+AY L + +IV +++D +S D L K E+ Sbjct: 242 HMIDMSGSEGREPIE-DYKVINQELAAYEQRLEDRPQIVVANKMDLPESQDNLNLFKEEI 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +P S+IT I Q+L + DK+ Sbjct: 301 GEDVPVIP--VSTITRDNIDQLLYTIADKL 328 >gi|328953073|ref|YP_004370407.1| GTPase obg [Desulfobacca acetoxidans DSM 11109] gi|328453397|gb|AEB09226.1| GTPase obg [Desulfobacca acetoxidans DSM 11109] Length = 341 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 137/323 (42%), Positives = 203/323 (62%), Gaps = 4/323 (1%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F DEA + + +G GGAG +SF+R +F G PDGG GG GGDV + A S+L TL +FR+ Sbjct: 5 RFADEADIVVEAGCGGAGCVSFQRRRFQPRGAPDGGDGGDGGDVILVACSSLRTLANFRH 64 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 Q+HF+AQ GE G + + GA G ++ + VP GT V + L+ DL + +++A GG Sbjct: 65 QRHFRAQKGESGRGQLKKGAHGANLEIPVPPGTMVLDAGSGQLLADLVKVPDTVVVAQGG 124 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNAHF SS ++P +A G GQ++ + L+L L+AD+G+IG PNAGK+T LA +T Sbjct: 125 RGGKGNAHFGSSRLRSPRFAQSGEPGQQRQLRLELHLLADVGLIGSPNAGKTTLLARLTA 184 Query: 182 AKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +K + + +PF+TL PNLG+++ E + I+ADIPG+I AH G G+GDRFL+H +RT +L Sbjct: 185 SKARGSSHPFSTLEPNLGVIQHEEHDSIIVADIPGLITGAHLGKGLGDRFLRHVQRTRLL 244 Query: 241 LHIV--SALEENVQAA-YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 L +V S L+ A + I EL Y+ +L K +V L++ID + D Sbjct: 245 LQVVDASVLDPTAPCAPVELIRKELGTYDPQLLLKKYLVVLNKIDLLSQDFPLPAVIAAL 304 Query: 298 TQCGQVPFEFSSITGHGIPQILE 320 +CG S++TG G+ ++ E Sbjct: 305 QRCGWPCLALSALTGQGVARLEE 327 >gi|261837748|gb|ACX97514.1| GTP-binding protein of the GTP1/Obg family [Helicobacter pylori 51] Length = 360 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 152/325 (46%), Positives = 207/325 (63%), Gaps = 12/325 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN G KGED ++ VP GTQVF +D + L DL + +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCVGKKGEDKIIVVPPGTQVFVDDKLWL--DLVEPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A +G G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASEGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELAT 298 ++ A L+ ++ YQ + EL ++ L K V L++ D V++ D +A+ Sbjct: 240 FVLDASRLDLGIKEQYQRLRLELEKFSPALANKPFGVLLNKCDVVENIDEMAKD------ 293 Query: 299 QCGQVPFEFSSITGHGIPQILECLH 323 C + E + G+ L LH Sbjct: 294 FCTFLNLEVQKLEAFGLEPYLGFLH 318 >gi|302333317|gb|ADL23510.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 430 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 139/330 (42%), Positives = 208/330 (63%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVVFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE G N G ED+VL VP GT + + ++ DL ++GQR ++A GG Sbjct: 62 RHFKASKGENGQSSNMHGKNAEDLVLKVPPGTIIKNVETDEVLADLVEDGQRAVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSEKGEPGKELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDQRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 H++ S E ++ Y+ I EL+AY L + +IV +++D +S D L K E+ Sbjct: 242 HMIDMSGSEGREPIE-DYKVINQELAAYEQRLEDRPQIVVANKMDLPESQDNLILFKEEI 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +P S+IT I Q+L + DK+ Sbjct: 301 GEDVPVIP--VSTITRDNIDQLLYAIADKL 328 >gi|294783694|ref|ZP_06749018.1| Obg family GTPase CgtA [Fusobacterium sp. 1_1_41FAA] gi|294480572|gb|EFG28349.1| Obg family GTPase CgtA [Fusobacterium sp. 1_1_41FAA] Length = 428 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 145/335 (43%), Positives = 220/335 (65%), Gaps = 6/335 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + +++G+GG G +FRREKFI+FGGPDGG GG+GGDV A SN+NTLIDF+++ Sbjct: 2 FIDEVIITVKAGNGGDGSAAFRREKFIQFGGPDGGDGGKGGDVVFVADSNINTLIDFKFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKAQ+GE G K+ G KGED+++ VPVGTQV + LI D++ G++ +L GG Sbjct: 62 KLFKAQNGENGQKKQMYGKKGEDLIIKVPVGTQVRDFTTGKLILDMNVNGEKRVLLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN HFK+S +AP A G G E + L+LKL+AD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGYGNVHFKNSVRKAPKIAEKGGEGAEIKVKLELKLLADVALVGYPSVGKSSFINKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K+ Y FTTL P LG+V+ E K F++ADIPG+I+ AH+G G+GD+FL+H ER ++ Sbjct: 182 NSKVGSYHFTTLEPKLGVVRLEEGKSFVIADIPGLIEGAHEGVGLGDKFLRHIERCKMIY 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 HIV A E + ++ I +EL ++ +L K +IV +++D + D + + K+ LA Sbjct: 242 HIVDAAEIEGRDCIEDFEKINEELRKFSEKLANKKQIVIANKMDLIWDMEKFEKFKSYLA 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + ++ + S + G+ +IL +D + I E Sbjct: 302 EKGIEI-YPVSVLLNEGLKEILYKTYDMLSKIERE 335 >gi|218899609|ref|YP_002448020.1| spo0B-associated GTP-binding protein [Bacillus cereus G9842] gi|228902970|ref|ZP_04067110.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis IBL 4222] gi|228967520|ref|ZP_04128547.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar sotto str. T04001] gi|229032092|ref|ZP_04188073.1| Spo0B-associated GTP-binding protein [Bacillus cereus AH1271] gi|229098914|ref|ZP_04229849.1| Spo0B-associated GTP-binding protein [Bacillus cereus Rock3-29] gi|229117942|ref|ZP_04247303.1| Spo0B-associated GTP-binding protein [Bacillus cereus Rock1-3] gi|261266670|sp|B7IIV2|OBG_BACC2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|218542068|gb|ACK94462.1| spo0B-associated GTP-binding protein [Bacillus cereus G9842] gi|228665513|gb|EEL20994.1| Spo0B-associated GTP-binding protein [Bacillus cereus Rock1-3] gi|228684412|gb|EEL38355.1| Spo0B-associated GTP-binding protein [Bacillus cereus Rock3-29] gi|228729232|gb|EEL80228.1| Spo0B-associated GTP-binding protein [Bacillus cereus AH1271] gi|228792175|gb|EEM39750.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis serovar sotto str. T04001] gi|228856646|gb|EEN01166.1| Spo0B-associated GTP-binding protein [Bacillus thuringiensis IBL 4222] Length = 428 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 136/322 (42%), Positives = 209/322 (64%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFVVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL Q ++A GG Sbjct: 62 RHFKADRGQHGMSKGQHGRKSEDLIVKVPPGTIVKDEKTGQILADLVTHEQTAVIARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F ++TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATATNPAPEIAENGEPGQERDVILELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE Y I +EL YN L ++ ++V +++D D+ + L K ++ Sbjct: 242 HVIDMSGLEGREPYEDYVTINNELKEYNMRLTERPQVVVANKMDMPDAEENLQAFKEKVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 302 DEVKIFP--ISAVTKQGVRDLL 321 >gi|303241616|ref|ZP_07328115.1| GTP-binding protein Obg/CgtA [Acetivibrio cellulolyticus CD2] gi|302590836|gb|EFL60585.1| GTP-binding protein Obg/CgtA [Acetivibrio cellulolyticus CD2] Length = 424 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 152/332 (45%), Positives = 217/332 (65%), Gaps = 6/332 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+YI++GDGG G +SF REK+I GGPDGG GG+GGDV A L TL DFRY+ Sbjct: 2 FIDSAKIYIKAGDGGNGAVSFHREKYIAKGGPDGGDGGKGGDVIFIADEGLRTLQDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA+ G+ G N SG ED+V+ VPVGT + EE+ +I DL G+++++A GG Sbjct: 62 RKYKAESGQNGGAGNCSGRGAEDLVIKVPVGTLIKEEETGRIIADLVTPGKKVVVAKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST Q P +A G G+E L+LKL+AD+G+IG PN GKST L+ V+ A Sbjct: 122 GGAGNQHFATSTRQVPNFAKSGDPGEEIFAMLELKLLADVGLIGFPNVGKSTILSMVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PKIA+Y FTT+ PNLG+V+ EG K F+LADIPG+I+ AH+G G+G +FLKH ERT +L Sbjct: 182 EPKIANYHFTTIEPNLGVVRIDEG-KSFVLADIPGLIEGAHEGTGLGHQFLKHVERTRML 240 Query: 241 LHIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +H+V S E + ++ I EL YN +L +K +I+ +++D ++ + N+ Sbjct: 241 IHVVDISGSEGRDPLKDFEIINSELKQYNPKLFEKPQIIAANKMDVTGAEENLKAFNDKL 300 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 G F S+ T G+ ++L + K+ I Sbjct: 301 ESEGYKIFPISAATSEGLKELLYYVSQKLDEI 332 >gi|317179300|dbj|BAJ57088.1| GTPase ObgE [Helicobacter pylori F30] Length = 360 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 152/325 (46%), Positives = 207/325 (63%), Gaps = 12/325 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGTVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF +D + L DL + +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCAGKKGEDKIIVVPPGTQVFVDDKLWL--DLVEPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A +G G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASEGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELAT 298 ++ A L+ V+ YQ + EL ++ L K V L++ D V++ D + + Sbjct: 240 FVLDASRLDLGVKEQYQRLRLELEKFSPALANKPFGVLLNKCDVVENIDEMTKD------ 293 Query: 299 QCGQVPFEFSSITGHGIPQILECLH 323 C + E + G+ L LH Sbjct: 294 FCAFLNLEAQKLEAFGLEPYLGFLH 318 >gi|114564249|ref|YP_751763.1| GTPase ObgE [Shewanella frigidimarina NCIMB 400] gi|122298923|sp|Q07YJ0|OBG_SHEFN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|114335542|gb|ABI72924.1| GTP1/OBG sub domain protein [Shewanella frigidimarina NCIMB 400] Length = 388 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 140/303 (46%), Positives = 202/303 (66%), Gaps = 4/303 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG+G +SFRREK++ GGPDGG GG GG V++QA NLNTLID+R Sbjct: 1 MKFVDEANIRVEAGDGGSGCVSFRREKYVPDGGPDGGDGGDGGSVYLQANENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + A+ G G R+ +G G D+VL VPVGT+ +++ + DL GQ++++A G Sbjct: 61 FTRFHMAERGTNGRGRDCTGHGGSDLVLQVPVGTRAIDQETEESLGDLTVNGQKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP G G+ + I L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSTNRAPRQKTLGTPGEVRSIKLELLLLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 RA PK+ADYPFTTL PNLG+V + F++ADIPG+I+ A +GAG+G RFLKH ER + Sbjct: 181 RATPKVADYPFTTLVPNLGVVNPRPGQSFVIADIPGLIEGAAEGAGLGIRFLKHLERCRM 240 Query: 240 LLHIVSALE-ENVQAAY--QCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHI+ + V Y + I+ EL Y+ +L K + ++ D + + + K + + Sbjct: 241 LLHIIDIEPIDGVDPVYSARAIVGELEKYSPKLAAKPRWLVFNKTDLLLDEEIQAKIDRI 300 Query: 297 ATQ 299 + Sbjct: 301 VKE 303 >gi|260881770|ref|ZP_05405173.2| Obg family GTPase CgtA [Mitsuokella multacida DSM 20544] gi|260847834|gb|EEX67841.1| Obg family GTPase CgtA [Mitsuokella multacida DSM 20544] Length = 445 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 135/324 (41%), Positives = 207/324 (63%), Gaps = 6/324 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D +V +++GDGG G +FRREKFI GGP GG GGRGGD+ N+NTL+DFR Sbjct: 20 MQFIDRTRVIVKAGDGGHGKSAFRREKFIPKGGPSGGDGGRGGDIIFVVDQNMNTLLDFR 79 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + FKA++GE G +N+ G + VP GT V +E+ ++ DL + GQ ++ G Sbjct: 80 YHRKFKAENGENGDIKNQYGKNAPACYVKVPAGTIVKDEETGEVLADLTEIGQEAVICKG 139 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F ++ N+AP +A G G+ + + L+LKL+AD+G++G P+ GKS+ +ASV+ Sbjct: 140 GRGGRGNAKFANAANRAPTFAEFGEPGEARNLILELKLLADVGLVGYPSVGKSSLVASVS 199 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P+IA+Y FTT+ P LG+VK Y K F++ADIPG+I+ A G G+G FL+H ERT + Sbjct: 200 AARPEIAEYHFTTITPVLGVVKTDYEKSFVMADIPGLIEGAADGVGLGHDFLRHVERTKL 259 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 +LHIV A + V Y+ I EL Y+ ++ ++ +I+ ++ID ++ + Sbjct: 260 ILHIVDASGIEGRDPVDDFYK-INAELKKYSEKIARRTQILVANKIDLPEAQENLPRLKA 318 Query: 296 LATQCGQVPFEFSSITGHGIPQIL 319 LA + G F S+ T G+ +++ Sbjct: 319 LAEKEGLKFFAISAATREGVKELI 342 >gi|330718681|ref|ZP_08313281.1| GTPase CgtA [Leuconostoc fallax KCTC 3537] Length = 438 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 136/328 (41%), Positives = 206/328 (62%), Gaps = 9/328 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D+A++ +++G GG G +SFR EKF+ GGP GG GG GG + + L TL+DFR Sbjct: 1 MAFVDQAQIEVKAGKGGDGIVSFRHEKFVAMGGPFGGDGGHGGSIIFRVDEGLRTLMDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HFKAQ G G + +GA +D + VP GT V + D ++ DL + GQ +++A G Sbjct: 61 YNRHFKAQPGGNGGTKGMTGASAQDRYIKVPQGTTVTDADTGKVLGDLLENGQELVVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF + N AP + G GQ + L+LK++AD+G++G P+AGKST L+ V+ Sbjct: 121 GRGGRGNIHFATPANPAPELSENGEPGQVFNLKLELKVLADVGLVGFPSAGKSTLLSVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+A Y FTTL PN+G+V+ + + +F++AD+PG+I+ A QG G+G +FL+H ERT V Sbjct: 181 NAKPKVAAYHFTTLSPNIGMVRLDDHNDFVMADLPGLIEGASQGIGLGFQFLRHVERTRV 240 Query: 240 LLHIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 +LH+V S +E E+ Y+ IL EL Y+ + + +IV +++D DS+ + E Sbjct: 241 ILHLVDMSGIEGEDPYQQYRRILSELEQYDRTILDRPQIVVPTKMDMPDSEENLKTFTEQ 300 Query: 297 ATQ---CGQVP--FEFSSITGHGIPQIL 319 T VP S++T G+ ++ Sbjct: 301 VTAESGLSTVPKIMPISAMTRTGVDSLM 328 >gi|167770669|ref|ZP_02442722.1| hypothetical protein ANACOL_02015 [Anaerotruncus colihominis DSM 17241] gi|167667264|gb|EDS11394.1| hypothetical protein ANACOL_02015 [Anaerotruncus colihominis DSM 17241] Length = 423 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 136/338 (40%), Positives = 216/338 (63%), Gaps = 8/338 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ I++G GG G ++FRREK++ GGPDGG GGRGG++ A +NL+TL+DF+Y+ Sbjct: 2 FVDKVKIRIKAGSGGNGAVAFRREKYVAAGGPDGGDGGRGGNIVFVADTNLSTLVDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A++G G + SG D+V+ VP GT V E ++ DL + + +++A GG Sbjct: 62 RRFFAENGANGAAKKMSGKNAPDLVIRVPKGTVVREAQSGRVMADLSSD-EPVVVARGGK 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN+HF + T Q P ++ PG+ G+E + L+LKL+AD+G++G PN GKST L+ V+ A Sbjct: 121 GGWGNSHFATPTRQCPRFSKPGLPGEEYEVELELKLLADVGLVGFPNVGKSTLLSVVSAA 180 Query: 183 KPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KP+IA+Y FTTL P LG+VK EG K F++ADIPG+I+ A +G G+G FL+H ER ++ Sbjct: 181 KPEIANYHFTTLSPVLGVVKVDEG-KSFVMADIPGLIEGASEGVGLGHAFLRHVERCRLI 239 Query: 241 LHI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +H+ VS E + ++ I EL+ +NSEL + +I+ ++ D + L + A Sbjct: 240 VHVVDVSGSEGRDPIEDFRTINAELANFNSELASRPQIIAANKCDLAAPEQLEAFR-AFA 298 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 + G +E + G GI ++ + K+ ++ +F Sbjct: 299 RESGYPLYEICAPIGEGIQPLIYAVSQKLDTLPPIRQF 336 >gi|228475162|ref|ZP_04059888.1| Obg family GTPase CgtA [Staphylococcus hominis SK119] gi|228270773|gb|EEK12175.1| Obg family GTPase CgtA [Staphylococcus hominis SK119] Length = 430 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 138/333 (41%), Positives = 212/333 (63%), Gaps = 7/333 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFR+Q Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVIFEVDEGLRTLLDFRFQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE G N G ED+VL VP GT + + ++ DL +EGQR ++A GG Sbjct: 62 RHFKAKKGENGQSSNMHGKNAEDLVLKVPPGTIIKSVETEEVLADLVEEGQRAVIARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSENGEPGEELDVTLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V ++ F++AD+PG+I+ A +G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDHRSFVMADLPGLIEGASEGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S E + YQ I +EL Y L + +I+ +++D ++ D L K E+ Sbjct: 242 HMIDMSGSEGRDPLEDYQIINNELINYKQRLEDRPQIIVANKMDIPEAKDNLELFKKEID 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 + VP S+IT I Q+L + DK+ ++ Sbjct: 302 EEVTIVP--VSTITRDNIDQLLYTIADKLEEVK 332 >gi|325928646|ref|ZP_08189825.1| GTP-binding protein Obg/CgtA [Xanthomonas perforans 91-118] gi|325540974|gb|EGD12537.1| GTP-binding protein Obg/CgtA [Xanthomonas perforans 91-118] Length = 338 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 146/309 (47%), Positives = 196/309 (63%), Gaps = 14/309 (4%) Query: 19 GGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNR 78 G + FRREKFI GGPDGG GG GG VWI A N+NTL+DFR+++ FKAQ GE GM R Sbjct: 2 GCVGFRREKFIPLGGPDGGDGGAGGSVWIVADENVNTLVDFRHERTFKAQRGENGMGRQA 61 Query: 79 SGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAP 138 G GED ++ VPVGT V +I DL + G R+++A GG GG GN HFKSS N+AP Sbjct: 62 YGKGGEDRIIVVPVGTVVINVQTDEVIGDLTRHGDRLLVAKGGKGGLGNMHFKSSVNRAP 121 Query: 139 YYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL 198 A G G+E+++ L+LKL+AD+G++G PNAGKST + +V+ A PK+ADYPFTTLYPNL Sbjct: 122 RQATTGEEGEERLLKLELKLLADVGLLGFPNAGKSTLIRAVSSATPKVADYPFTTLYPNL 181 Query: 199 GIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS---AL------- 247 G+V E Y+ F++AD+PG+I+ A GAG+G +FL+H +RT +LLH+V AL Sbjct: 182 GVVSVEAYRSFVIADVPGLIEGAADGAGLGTQFLRHLQRTRLLLHLVDISPALGVYGEGG 241 Query: 248 EENVQAAYQC--ILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG-QVP 304 + V A Q I EL ++ EL KK + L++ D + D + + G P Sbjct: 242 VDGVSPADQVRTIERELERHDPELLKKPRWLVLNKADLMFEDEARAAAESIVAELGWTAP 301 Query: 305 FEFSSITGH 313 + S G Sbjct: 302 WYLVSALGR 310 >gi|163786228|ref|ZP_02180676.1| putative Spo0B-related GTP-binding protein [Flavobacteriales bacterium ALC-1] gi|159878088|gb|EDP72144.1| putative Spo0B-related GTP-binding protein [Flavobacteriales bacterium ALC-1] Length = 332 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 146/329 (44%), Positives = 211/329 (64%), Gaps = 7/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+++ SG+GG G REK+ GGPDGG GGRGG V ++ SNL TLI +++ Sbjct: 6 FVDYVKMHVSSGNGGKGSSHLNREKYNAKGGPDGGDGGRGGHVILKGNSNLWTLIHLKFK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H +A HG G +G+ G D L VP+GT V + + ++ ++ + G+ I+A GG Sbjct: 66 RHIRAGHGAHGSSGRSTGSDGVDEYLEVPLGTVVRDSETNDILFEITENGEEKIVAEGGM 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSS NQ P YA PGI +E+ I L+LK++AD+G++G PNAGKST L+ +T A Sbjct: 126 GGRGNWHFKSSINQTPRYAQPGIPLEERHITLELKILADVGLVGFPNAGKSTLLSVLTSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLGIV+ YK F++ADIPGII+ A +G G+G FL+H ER +LL Sbjct: 186 KPKIADYEFTTLKPNLGIVEYRDYKSFVMADIPGIIEGAAEGKGLGYYFLRHIERNSILL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A +++ Y+ +LDEL YN E+ K V +S+ D +D D L + + + + Sbjct: 246 FLIPADAKDIVEQYEILLDELRRYNPEMLDKERFVVVSKSDMLD-DELKSEISSILDKDL 304 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFSI 329 Q + F SS+ G+ + L DK++ + Sbjct: 305 QADYMFISSVAQQGLME----LKDKLWKM 329 >gi|126695577|ref|YP_001090463.1| GTPase ObgE [Prochlorococcus marinus str. MIT 9301] gi|261277672|sp|A3PAT7|OBG_PROM0 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|126542620|gb|ABO16862.1| GTP1/OBG family [Prochlorococcus marinus str. MIT 9301] Length = 327 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 131/290 (45%), Positives = 195/290 (67%), Gaps = 1/290 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A + +++G GG G +SFRREKF+ GGP GG+GGRGG V + A +NL TL+DF+ Sbjct: 1 MQFIDQANIILKAGKGGNGIVSFRREKFVPAGGPSGGNGGRGGSVILMADNNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ G KG RSGA G+D +L VP GT++ + ++ DL ++ Q + +A G Sbjct: 61 FKREIIAEDGCKGGPNKRSGASGQDTILKVPCGTEIRDIKTGIILGDLTKDKQSLTIAIG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA++ S+ N+AP G G+ + L+LKL+A++GIIGLPNAGKST ++ V+ Sbjct: 121 GRGGHGNAYYLSNQNRAPESFTEGKDGEIWEVQLELKLLAEVGIIGLPNAGKSTLISVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL PNLG+V++ + ADIPG+I A G G+G FL+H +RT + Sbjct: 181 SARPKIANYPFTTLIPNLGVVRKMDGNGCLFADIPGLISGAADGVGLGHDFLRHIQRTKI 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 L+H++ A+ EN ++ I EL Y L K I+ L++++ VD D L Sbjct: 241 LVHLIDAIAENPLHDFEIIEQELKKYGKGLLDKERIIVLNKMELVDDDYL 290 >gi|229175114|ref|ZP_04302630.1| Spo0B-associated GTP-binding protein [Bacillus cereus MM3] gi|228608250|gb|EEK65556.1| Spo0B-associated GTP-binding protein [Bacillus cereus MM3] Length = 427 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 137/322 (42%), Positives = 207/322 (64%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFVVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL GQ ++A GG Sbjct: 62 RHFKADRGQHGMSKGQHGRKSEDLIVKVPPGTIVKDEKTGEILADLVTHGQTAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATPTNPAPEIAENGEPGQERDVTLELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE Y I EL YN L ++ ++V +++D + + L K +L Sbjct: 242 HVIDMSGLEGREPYEDYVTINSELKEYNMRLTERPQVVVANKMDMPGAEENLQAFKEKLG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 302 DEVKIFP--ISAVTKQGVRDLL 321 >gi|225619154|ref|YP_002720380.1| putative GTPase ObgE [Brachyspira hyodysenteriae WA1] gi|261266686|sp|C0QX49|OBG_BRAHW RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|225213973|gb|ACN82707.1| putative GTPase ObgE [Brachyspira hyodysenteriae WA1] Length = 680 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 134/292 (45%), Positives = 197/292 (67%), Gaps = 1/292 (0%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D I +G GGAG +SFRRE + GGPDGG+GG GGDV ++ + +N+ + Sbjct: 3 QFIDVVSFEIEAGHGGAGSVSFRREAHVPMGGPDGGNGGDGGDVIVRVDARINSFGKIKS 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 ++ F+A+ GE G R G +G+DVV+ VP+GT V++ED +++ DL ++GQ +A GG Sbjct: 63 RKRFRARDGEPGRARLSDGKRGDDVVIRVPIGTVVYDEDTNNILADLLEDGQSYTVARGG 122 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN + ++TNQAP YA G+ G++ I L++KLIADIG++G+PN GKS+ LA +TR Sbjct: 123 KGGKGNKFYATATNQAPDYAQHGLDGEKLNIRLEVKLIADIGLVGMPNTGKSSLLARLTR 182 Query: 182 AKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PKIA YPFTTL PNLG+ Y + F++ADIPGII+ A +GAG+G FL+H ERT L Sbjct: 183 ANPKIASYPFTTLTPNLGVCYLDYERSFVIADIPGIIEGASEGAGLGLTFLRHIERTGAL 242 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 ++ +E+V Y+ + +EL Y+ EL KK I+ L++ D ++ D + K Sbjct: 243 CFVIDLTDEDVADTYKKLRNELKQYSKELIKKKSIIVLNKTDMLEKDEIKAK 294 >gi|262066429|ref|ZP_06026041.1| Obg family GTPase CgtA [Fusobacterium periodonticum ATCC 33693] gi|291379856|gb|EFE87374.1| Obg family GTPase CgtA [Fusobacterium periodonticum ATCC 33693] Length = 428 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 145/335 (43%), Positives = 220/335 (65%), Gaps = 6/335 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + +++G+GG G +FRREKFI+FGGPDGG GG+GGDV A SN+NTLIDF+++ Sbjct: 2 FIDEVIITVKAGNGGDGSAAFRREKFIQFGGPDGGDGGKGGDVVFVADSNINTLIDFKFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKAQ+GE G K+ G KGED+++ VPVGTQV + LI D++ G++ +L GG Sbjct: 62 KLFKAQNGENGQKKQMYGKKGEDLIIKVPVGTQVRDFTTGKLILDMNVNGEQRVLLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN HFK+S +AP A G G E + L+LKL+AD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGYGNVHFKNSVRKAPKIAEKGGEGAEIKVKLELKLLADVALVGYPSVGKSSFINKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K+ Y FTTL P LG+V+ E K F++ADIPG+I+ AH+G G+GD+FL+H ER ++ Sbjct: 182 NSKVGSYHFTTLEPKLGVVRLEEGKSFVIADIPGLIEGAHEGVGLGDKFLRHIERCKMIY 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 HIV A E + ++ I +EL ++ +L K +IV +++D + D + + K+ LA Sbjct: 242 HIVDAAEIEGRDCIEDFEKINEELRKFSEKLANKKQIVIANKMDLIWDMEKFEKFKSYLA 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + ++ + S + G+ +IL +D + I E Sbjct: 302 EKGIEI-YPVSVLLNEGLKEILYKTYDMLSKIERE 335 >gi|169832016|ref|YP_001717998.1| small GTP-binding protein [Candidatus Desulforudis audaxviator MP104C] gi|261266820|sp|B1I5V8|OBG_DESAP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|169638860|gb|ACA60366.1| small GTP-binding protein [Candidatus Desulforudis audaxviator MP104C] Length = 425 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 153/321 (47%), Positives = 220/321 (68%), Gaps = 5/321 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+++++GDGG G ++FRREK++ +GGP GG GGRGG V ++A L TL+DFRY+ Sbjct: 2 FKDYAKIHVKAGDGGNGCVAFRREKYVPYGGPSGGDGGRGGHVILRADGGLRTLVDFRYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H+KA G G +N G KGED+VL VPVGT+V +L+ DL +GQ +A GG Sbjct: 62 THYKAGRGTHGQGKNMHGRKGEDLVLRVPVGTEVRRAGDATLMADLTVDGQEYRVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F ++ +AP +A G G+E + L+LKL+AD+G++G PNAGKST ++ V+ A Sbjct: 122 GGRGNARFAAANRRAPSFAEKGEPGEELWLELELKLLADVGLVGFPNAGKSTIISKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADYPFTTL P+LG+V+ G E F+LADIPG+I+ AH+GAG+G RFL+H ERT VL+ Sbjct: 182 RPKIADYPFTTLEPHLGVVRVGEGESFVLADIPGLIEGAHRGAGLGHRFLRHVERTRVLI 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+ VS E + A ++ I EL+AY+ L + ++V ++ D + AR+ E A Sbjct: 242 HVVDVSGREGRDPVADFEAINRELAAYDPRLAARPQLVAANKTDLPGARDNARRLAEAAG 301 Query: 299 QCGQVPFEFSSITGHGIPQIL 319 +V FE S++TG G+ +++ Sbjct: 302 GRYEV-FEISALTGEGLDRLI 321 >gi|154795719|gb|ABS86845.1| GTP-binding protein [Helicobacter cetorum] Length = 363 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 145/286 (50%), Positives = 196/286 (68%), Gaps = 5/286 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GGAG +SFRREKF+ GGPDGG GG GGDV+ + +N +TL +FR Sbjct: 2 FVDSVEIIIASGKGGAGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLANFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED V+ VP GTQVF +D + L DL Q+++ GG Sbjct: 62 KHHKAKNGAMGGTRNCAGKKGEDKVIVVPPGTQVFVDDELWL--DLVTPKQKVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQHPTYAQKGLPGVEKCVRLELKLIADIGLVGFPNAGKSTLISTLSNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A +G G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASEGKGLGISFLKHIERTKVLA 239 Query: 242 HIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 ++ S L+ N++ Y+ + EL ++ L K V L++ D ++ Sbjct: 240 FVLDTSRLDLNIKEQYKRLRLELEKFSPTLANKPFGVLLNKCDILE 285 >gi|75763159|ref|ZP_00742929.1| GTP-binding protein CgtA (probably involved in DNA repair) [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74489354|gb|EAO52800.1| GTP-binding protein CgtA (probably involved in DNA repair) [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 461 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 136/322 (42%), Positives = 209/322 (64%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 35 FVDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFVVEEGLRTLMDFRYQ 94 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL Q ++A GG Sbjct: 95 RHFKADRGQHGMSKGQHGRKSEDLIVKVPPGTIVKDEKTGQILADLVTHEQTAVIARGGR 154 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F ++TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 155 GGRGNSRFATATNPAPEIAENGEPGQERDVILELKVLADVGLVGFPSVGKSTLLSVVSSA 214 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 215 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 274 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE Y I +EL YN L ++ ++V +++D D+ + L K ++ Sbjct: 275 HVIDMSGLEGREPYEDYVTINNELKEYNMRLTERPQVVVANKMDMPDAEENLQAFKEKVG 334 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 335 DEVKIFP--ISAVTKQGVRDLL 354 >gi|207092474|ref|ZP_03240261.1| GTPase ObgE [Helicobacter pylori HPKX_438_AG0C1] Length = 298 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 147/293 (50%), Positives = 198/293 (67%), Gaps = 6/293 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF D + L DL + +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCAGKKGEDKIIVVPPGTQVFVGDKLWL--DLVEPKKRVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A QG G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASQGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLAR 291 ++ A L+ ++ YQ + EL ++ L K V L++ D V++ D +A+ Sbjct: 240 FVLDASRLDLGIKEQYQRLRLELEKFSPALANKPFGVLLNKCDVVENIDKMAK 292 >gi|332652534|ref|ZP_08418279.1| Obg family GTPase CgtA [Ruminococcaceae bacterium D16] gi|332517680|gb|EGJ47283.1| Obg family GTPase CgtA [Ruminococcaceae bacterium D16] Length = 426 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 136/324 (41%), Positives = 207/324 (63%), Gaps = 9/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A++ +RSG+GG G +SF REK++ GGPDGG GG+GG+V + N++TL+DFRY+ Sbjct: 5 FVDTARITVRSGNGGNGVVSFHREKYVAAGGPDGGDGGQGGNVVVVIDDNMSTLMDFRYK 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A +G G + +G G D+ L VP GT + + + +ICD+ Q Q +L GG Sbjct: 65 RKYVAANGMDGGGKRCTGRNGADLTLRVPRGTIIRDAETKEIICDMSQT-QSFVLCKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN HF + T Q P +A G+ GQ + + L+LKL+AD+G++G PN GKST L+ V+RA Sbjct: 124 GGWGNQHFATPTRQVPRFAKAGLPGQTRDVILELKLLADVGLVGFPNVGKSTLLSVVSRA 183 Query: 183 KPKIADYPFTTLYPNLGI--VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PKIA+Y FTTL+PNLG+ V+EG F++ADIPGII+ A QGAG+G FL+H +R +L Sbjct: 184 QPKIANYHFTTLFPNLGVVYVEEGVS-FVMADIPGIIEGAAQGAGLGHDFLRHIDRCRLL 242 Query: 241 LHIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 +H+V S + V+ ++ I EL+ Y+ L + IV +++D + L + E Sbjct: 243 IHVVDVSGSEGRDPVE-DFEAINAELAEYSPTLASRKMIVAANKVDIMQDPELLERLREH 301 Query: 297 ATQCGQVPFEFSSITGHGIPQILE 320 G FE S+ G ++++ Sbjct: 302 VKAKGMELFEISAAAHMGTRELMK 325 >gi|254757650|ref|ZP_05209677.1| GTPase ObgE [Bacillus anthracis str. Australia 94] Length = 428 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 136/322 (42%), Positives = 210/322 (65%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FIDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFIVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL GQ ++A GG Sbjct: 62 RHFKADRGQHGMSKGQHGRKSEDLLVKVPPGTVVKDEKTGQILADLVTHGQTAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ ++TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRXATATNPAPEIAENGEPGQERDVILELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE + Y I +EL YN L ++ ++V +++D D+ + L K ++ Sbjct: 242 HVIDMSGLEGRDPYEDYVTINNELKEYNLRLTERPQVVVANKMDMPDAEENLQAFKEKVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 302 DEVKIFP--ISAVTKQGVRDLL 321 >gi|323340879|ref|ZP_08081130.1| Spo0B-associated GTP-binding protein [Lactobacillus ruminis ATCC 25644] gi|323091730|gb|EFZ34351.1| Spo0B-associated GTP-binding protein [Lactobacillus ruminis ATCC 25644] Length = 438 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 139/327 (42%), Positives = 210/327 (64%), Gaps = 9/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FRREK++ GGP GG GG+GG V ++ L TL+DFR+ Sbjct: 5 FVDQVKIQVKAGKGGDGAVAFRREKYVPNGGPAGGDGGKGGSVVLKVDEGLRTLMDFRFH 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ G+ GM + G +D+ + VP GT V + + ++ DL GQ +++A GG Sbjct: 65 RIFKAKPGQNGMIKGMYGRGAKDLYIDVPQGTTVTDAETGEILGDLIDAGQELVVAKGGR 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S+ N AP A G G E+ I L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 125 GGRGNIHFASAKNPAPEIAENGEPGVERTIQLELKVLADVGLVGFPSVGKSTLLSVVTSA 184 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+V+ + ++F++AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 185 KPKIADYHFTTLVPNLGMVRLDDGRDFVMADLPGLIEGASQGVGLGIQFLRHVERTRVIL 244 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLA--RKKNE 295 H++ S +E + Y+ I EL+ Y+ L ++ +IV S++D D SD L R K E Sbjct: 245 HLIDMSGVEGRDPFDDYKKINAELAMYDPLLLERPQIVVASKMDMPDSSDNLEKFRAKLE 304 Query: 296 LATQCGQVP--FEFSSITGHGIPQILE 320 +P SS+T G+ +++ Sbjct: 305 NDDTLKHIPEVMAISSLTHQGLDALMQ 331 >gi|148244533|ref|YP_001219227.1| GTP1/Obg family GTP-binding protein [Candidatus Vesicomyosocius okutanii HA] gi|261277734|sp|A5CX17|OBG_VESOH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|146326360|dbj|BAF61503.1| GTP-binding protein, GTP1/Obg family [Candidatus Vesicomyosocius okutanii HA] Length = 334 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 135/328 (41%), Positives = 208/328 (63%), Gaps = 7/328 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D A V I +G GGAG + FRRE++I GGPDGG GG GG V+ Q LNTL +F Sbjct: 1 MKFVDSASVRIEAGKGGAGCLGFRRERYISDGGPDGGDGGDGGHVYFQGQDGLNTLSEFC 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A++G+ G +N+ G + + + +P+GT+V++ LI ++ + Q I++A G Sbjct: 61 FKRLFRAKNGQPGSGQNKRGKSAQHLTVEIPLGTKVYDLVTDELIGEMTKHEQTILVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP PG G+ + I L+L ++ADIG++G+PNAGKS+ + ++ Sbjct: 121 GFHGLGNTRFKSSINRAPRETTPGFPGEVREIGLELSVMADIGLLGIPNAGKSSLIRQIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+P+L +V K ++ADIPG+I+NA +GAG+G +FLKH R VL Sbjct: 181 SARPKIADYPFTTLHPSLSVVSFCDKHIVMADIPGLIENASKGAGLGFKFLKHLSRAKVL 240 Query: 241 LHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKN 294 LH+V L + + I EL Y+ EL K +++ +++ID + D +T+ + Sbjct: 241 LHVVDILPVDGSDPVKNFLTIEKELKKYDQELANKEKLLVINKIDLLPEKDRNTMVQSLL 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECL 322 + G+V F S++ G G ++ L Sbjct: 301 KDICYKGKV-FNISALNGLGCKDLVAGL 327 >gi|228993180|ref|ZP_04153101.1| Spo0B-associated GTP-binding protein [Bacillus pseudomycoides DSM 12442] gi|228999230|ref|ZP_04158810.1| Spo0B-associated GTP-binding protein [Bacillus mycoides Rock3-17] gi|229006776|ref|ZP_04164409.1| Spo0B-associated GTP-binding protein [Bacillus mycoides Rock1-4] gi|228754398|gb|EEM03810.1| Spo0B-associated GTP-binding protein [Bacillus mycoides Rock1-4] gi|228760427|gb|EEM09393.1| Spo0B-associated GTP-binding protein [Bacillus mycoides Rock3-17] gi|228766506|gb|EEM15148.1| Spo0B-associated GTP-binding protein [Bacillus pseudomycoides DSM 12442] Length = 428 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 135/321 (42%), Positives = 208/321 (64%), Gaps = 5/321 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFVVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K +D+++ VP GT V +E+ ++ DL Q ++A GG Sbjct: 62 RHFKADRGQHGMSKGQHGRKADDLIVKVPPGTVVKDEETGQILADLVTHEQSAVIARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATPTNPAPEIAENGEPGQERDVILELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ S LE + Y I EL YN L ++ ++V +++D D++ + E Sbjct: 242 HVIDMSGLEGRDPYEDYVTINAELKEYNLRLTERPQVVVANKMDMPDAEENLQAFKEKVG 301 Query: 299 QCGQVPFEFSSITGHGIPQIL 319 Q+ F S++T G+ +L Sbjct: 302 DEVQI-FPISAVTKQGVRDLL 321 >gi|326803490|ref|YP_004321308.1| Obg family GTPase CgtA [Aerococcus urinae ACS-120-V-Col10a] gi|326650833|gb|AEA01016.1| Obg family GTPase CgtA [Aerococcus urinae ACS-120-V-Col10a] Length = 444 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 148/331 (44%), Positives = 206/331 (62%), Gaps = 13/331 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+++++G GG G ++F REK+ GGP GG GGRGGDV + L TLIDFRY Sbjct: 4 FYDYAKIWVKAGKGGDGLVAFLREKYRPDGGPAGGDGGRGGDVIFKVDEGLRTLIDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE GM + R G +D+V+ VP GT V + D LI DL ++GQ +I+A GG Sbjct: 64 RHFKAKPGENGMTKGRYGRGADDLVVPVPPGTTVRDFDTGDLIGDLVEDGQELIVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G GQE+ + L+LKL+AD G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIKFATHNNPAPEIAENGEPGQERTLQLELKLLADAGLVGFPSVGKSTLLSVVSAA 183 Query: 183 KPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPK+ DY FTT+ PNLG+V ++EF+LAD+PG+I+ A +G G+G RFL+H ERT V+L Sbjct: 184 KPKVGDYHFTTINPNLGVVTTRNHEEFVLADLPGLIEGASEGIGLGMRFLRHIERTKVIL 243 Query: 242 HIVSA-LEENVQA--AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT-LARKKNELA 297 H+V EN Y I ELS Y+ EL + I+ +++D ++ L K +L Sbjct: 244 HVVDMGAYENRDPFEDYVKINKELSNYDEELIARPTIIVANKMDIPEAVLYLEEFKEKLC 303 Query: 298 TQCGQ------VP--FEFSSITGHGIPQILE 320 T + VP + S+ T GI ++E Sbjct: 304 TYFSENYPDLSVPEIYPISAFTHAGINDLME 334 >gi|296394159|ref|YP_003659043.1| GTP-binding protein Obg/CgtA [Segniliparus rotundus DSM 44985] gi|296181306|gb|ADG98212.1| GTP-binding protein Obg/CgtA [Segniliparus rotundus DSM 44985] Length = 502 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 143/354 (40%), Positives = 209/354 (59%), Gaps = 30/354 (8%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D V++ +G GG G S REKF GGPDGG+GG GG V + +S +TL+DF + Sbjct: 3 RFVDRVVVHVSAGSGGHGCCSVHREKFKPLGGPDGGNGGHGGSVVFEVSSQAHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H KA G+ GM NR+GA+GED+VL+VP GT VF+E G L+ DL EG R ++A GG Sbjct: 63 HPHIKASDGKMGMGANRNGARGEDLVLSVPSGTVVFDEQG-ELLADLTGEGTRFVVAQGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+ K + L+L+ +AD+G+IG PNAGKS+ + +++ Sbjct: 122 RGGLGNAALVSKARKAPGFALLGEEGETKDLTLELRSVADVGLIGYPNAGKSSLIGALSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A QG G+G FL+H +R VL+ Sbjct: 182 AKPKIADYPFTTLAPNLGVVSSGDTTFTVADVPGLIPGAAQGKGLGLDFLRHVDRCAVLV 241 Query: 242 HIVSALE----ENVQAAYQCILDELSAYNS---------ELRKKIEIVGLSQIDTVDSDT 288 H++ + + ++ + EL+AY +L ++ I L+++D D Sbjct: 242 HVLDCATLDSGRDPVSDFEAVEKELAAYQPALAADLGLGDLLRRPRIAVLNKVDVPDGAD 301 Query: 289 LARK-KNELATQC-------------GQVP--FEFSSITGHGIPQILECLHDKI 326 LA +ELA + + P F+ S+++G G+ + L D + Sbjct: 302 LADMVSDELALKLRDGEEAEPEPWAEPRAPKVFKVSAVSGEGLRALTFALADLV 355 >gi|57867155|ref|YP_188783.1| GTPase ObgE [Staphylococcus epidermidis RP62A] gi|81819380|sp|Q5HNQ7|OBG_STAEQ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|57637813|gb|AAW54601.1| GTP-binding protein, GTP1/OBG family [Staphylococcus epidermidis RP62A] Length = 430 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 208/333 (62%), Gaps = 7/333 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGIGASVVFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE G N G ED+VL VP GT + + ++ DL ++GQR I+A GG Sbjct: 62 RHFKAKKGENGQSSNMHGRNAEDLVLKVPPGTIIKSVESEEVLADLVEDGQRAIVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSENGEPGEELEVTLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V ++ F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDHRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKKNELA 297 H++ S E N Y+ I EL Y L + +I+ +++D DS L+ K +L Sbjct: 242 HMIDMSGSEGRNPLDDYKIINQELINYKQRLEDRPQIIVANKMDLPDSQGNLSHFKEQLD 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 VP S+IT I Q+L + DK+ ++ Sbjct: 302 NDVTVVP--VSTITRDNIDQLLYQIADKLEEVK 332 >gi|27468245|ref|NP_764882.1| GTPase ObgE [Staphylococcus epidermidis ATCC 12228] gi|251811049|ref|ZP_04825522.1| spo0B-associated GTP-binding protein [Staphylococcus epidermidis BCM-HMP0060] gi|282875931|ref|ZP_06284798.1| Obg family GTPase CgtA [Staphylococcus epidermidis SK135] gi|293366399|ref|ZP_06613078.1| Spo0B-associated GTP-binding protein [Staphylococcus epidermidis M23864:W2(grey)] gi|81842781|sp|Q8CNZ7|OBG_STAES RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|27315791|gb|AAO04926.1|AE016748_160 Spo0B-associated GTP-binding protein [Staphylococcus epidermidis ATCC 12228] gi|251805425|gb|EES58082.1| spo0B-associated GTP-binding protein [Staphylococcus epidermidis BCM-HMP0060] gi|281294956|gb|EFA87483.1| Obg family GTPase CgtA [Staphylococcus epidermidis SK135] gi|291319524|gb|EFE59891.1| Spo0B-associated GTP-binding protein [Staphylococcus epidermidis M23864:W2(grey)] gi|329724719|gb|EGG61225.1| Obg family GTPase CgtA [Staphylococcus epidermidis VCU144] gi|329733794|gb|EGG70120.1| Obg family GTPase CgtA [Staphylococcus epidermidis VCU045] gi|329737252|gb|EGG73506.1| Obg family GTPase CgtA [Staphylococcus epidermidis VCU028] Length = 430 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 209/333 (62%), Gaps = 7/333 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVVFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE G N G ED+VL VP GT + + ++ DL ++GQR I+A GG Sbjct: 62 RHFKAKKGENGQSSNMHGRNAEDLVLKVPPGTIIKSVESEEVLADLVEDGQRAIVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSENGEPGEELEVTLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V ++ F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDHRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKKNELA 297 H++ S E N Y+ I EL Y L + +I+ +++D DS L+ K +L Sbjct: 242 HMIDMSGSEGRNPLDDYKIINQELINYKQRLEDRPQIIVANKMDLPDSQGNLSHFKEQLD 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 VP S+IT I Q+L + DK+ ++ Sbjct: 302 NDVTVVP--VSTITRDNIDQLLYQIADKLEEVK 332 >gi|229824893|ref|ZP_04450962.1| hypothetical protein GCWU000182_00242 [Abiotrophia defectiva ATCC 49176] gi|229790896|gb|EEP27010.1| hypothetical protein GCWU000182_00242 [Abiotrophia defectiva ATCC 49176] Length = 428 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 140/329 (42%), Positives = 203/329 (61%), Gaps = 7/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+Y++SG+GG G +SFRRE F+ GGPDGG GG GGDV I+ N+NTL +FR+ Sbjct: 2 FADSAKIYVKSGNGGNGHVSFRRELFVAAGGPDGGDGGDGGDVIIEVDKNINTLNEFRFV 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ G++G K+ G GED+++ VP GT V E + +I D+ E +R ++ GG Sbjct: 62 RKYYAKDGDEGGKKRCHGKDGEDIIIKVPEGTVVKEAESGKVIVDMSGENKREVILKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN ++ + T Q P YA PG G E + L+LKLIAD+G++G PN GKST L+ T A Sbjct: 122 GGKGNMNYATPTMQVPTYAQPGKPGIELTLILELKLIADVGLVGYPNVGKSTILSRCTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL+PNLG+V G F++ADIPG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIANYHFTTLHPNLGVVDLGGGTGFVIADIPGLIEGAADGVGLGHQFLRHIERTRVIV 241 Query: 242 HIVSALEENVQAAYQCILD---ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V + + I + EL YN EL K +I+ ++ D + K E Sbjct: 242 HVVDISGSEGRDPIEDIKNINKELGNYNPELLKIPQIIAANKTDLFYGNEAKEKLKEFHE 301 Query: 299 QCGQ---VPFEFSSITGHGIPQILECLHD 324 + S+++G GI ++L ++D Sbjct: 302 AFDNENIAIYPISAVSGKGIKELLYAVND 330 >gi|119775959|ref|YP_928699.1| GTPase ObgE [Shewanella amazonensis SB2B] gi|261263077|sp|A1S9H3|OBG_SHEAM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|119768459|gb|ABM01030.1| GTP-binding protein, GTP1/Obg family [Shewanella amazonensis SB2B] Length = 389 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 150/342 (43%), Positives = 222/342 (64%), Gaps = 14/342 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +++GDGG+G +SFRREK+I GGPDGG GG GG V++ A ++LNTLID+R Sbjct: 1 MKFVDEAVIKVQAGDGGSGCVSFRREKYIPDGGPDGGDGGDGGSVYLVADASLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ + A+ GE G R+ +G G D+ L VPVGT+ + D ++ DL + GQ++++A G Sbjct: 61 FERFYLAERGENGRGRDCTGKGGSDLTLRVPVGTRAVDIDTDEVLGDLTEVGQKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKTLGTKGEVRELRLELLLLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 RA PK+ADYPFTTL PNLG+V + F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 181 RATPKVADYPFTTLVPNLGVVNPRPGQSFVIADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 240 LLHIV-------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 LLHI+ S+ E+ +A I+ EL Y+ EL K + ++ D + + L + Sbjct: 241 LLHILDIEPIDGSSPAESARA----IVAELEKYSPELAAKPRWLVFNKTDLLLEEELQER 296 Query: 293 KNELATQCGQV--PFEFSSITGHGIPQILECLHDKIFSIRGE 332 + + + G + S+ T G ++ E L D I S+ E Sbjct: 297 VDAIVAELGWEGDVYTMSAATREGTKELAEKLFDFIKSLPDE 338 >gi|315645766|ref|ZP_07898889.1| GTP-binding protein Obg/CgtA [Paenibacillus vortex V453] gi|315278846|gb|EFU42157.1| GTP-binding protein Obg/CgtA [Paenibacillus vortex V453] Length = 436 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 139/338 (41%), Positives = 215/338 (63%), Gaps = 10/338 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AKVY++ GDGG G I+FRREK++ GGP GG GG+GGDV + L TL+DFRYQ Sbjct: 2 FVDKAKVYVKGGDGGDGLIAFRREKYVPEGGPAGGDGGKGGDVIFRVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GEKG +++ GA + ++ +P GT + ++D +I DL + GQ++++A GG Sbjct: 62 KHFKAKRGEKGRNKSQHGANADSTIVRIPPGTILTDDDTGEVIGDLTRHGQQVVVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + ++LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPNNPAPELAENGEEGEERFVTMELKVMADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTT+ PNLG+V G + F++AD+PG+I+ AH+G G+G FL+H ERT V++ Sbjct: 182 QPKIGAYHFTTITPNLGMVDVGDGRNFVMADLPGLIEGAHEGVGLGHEFLRHVERTRVII 241 Query: 242 HIVSALEENVQAAY---QCILDELSAYNSELRKKIEIVGLSQIDTVDSD----TLARKKN 294 H+V + + + I DE+ YN L ++ +IV +++D +++ K Sbjct: 242 HVVDMAGTEGRDPFEDWEKINDEIRLYNPLLIERPQIVAANKMDMPEAEEYLAAFKEKIK 301 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 E+ +P SS+T GI ++L D + SI E Sbjct: 302 EIRPDIEIMP--ISSLTRQGIQELLYRTIDVLESIPDE 337 >gi|317177119|dbj|BAJ54908.1| GTPase ObgE [Helicobacter pylori F16] Length = 360 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 152/325 (46%), Positives = 205/325 (63%), Gaps = 12/325 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF +D + L DL + +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCTGKKGEDKIIVVPPGTQVFADDKLWL--DLVEPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A QG G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASQGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSALEENVQAAYQC--ILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELAT 298 ++ A ++ QC + EL ++ L K V L++ D V++ D L + Sbjct: 240 FVLDASRLDLGIKEQCQRLRLELEKFSPALANKPFGVLLNKCDVVENIDELTKD------ 293 Query: 299 QCGQVPFEFSSITGHGIPQILECLH 323 C + E + G+ L LH Sbjct: 294 FCAFLNLEAQKLEAFGLEPYLGFLH 318 >gi|258645345|ref|ZP_05732814.1| Obg family GTPase CgtA [Dialister invisus DSM 15470] gi|260402694|gb|EEW96241.1| Obg family GTPase CgtA [Dialister invisus DSM 15470] Length = 459 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 135/326 (41%), Positives = 213/326 (65%), Gaps = 6/326 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F+D+AK+ + SG GG G +SFRREK++ GGP GG GG+GG V+I+AT LNTL++FR Sbjct: 21 LMFIDKAKIIVISGAGGDGMVSFRREKYVPRGGPSGGDGGKGGSVFIRATPELNTLMNFR 80 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ F A GE G + G G+D+ + VP+GT V+++ L+ D+ + Q +++A G Sbjct: 81 RKRKFAAAKGENGGAKEMFGKSGDDIFIDVPLGTMVYDQSTNELLADITHDKQEVLIAKG 140 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG GN+HF +S +AP YA G G+EK I L+LK++AD+G++G P+ GKS+ + V+ Sbjct: 141 GNGGRGNSHFATSAVRAPAYAEKGEPGEEKEIRLELKVLADVGLLGFPSVGKSSLIRKVS 200 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P++A Y FTTL P+LG+V + + F++ADIPG+I+ A +G G+G FL+H ER+ V Sbjct: 201 GARPEVAAYHFTTLTPSLGVVNLDEIRSFVMADIPGLIEGASEGTGLGYEFLRHVERSKV 260 Query: 240 LLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNE 295 L+H++ A + Y+ I +EL Y+ L K +IV ++ID + +S+ L + + Sbjct: 261 LIHVLDAAGSEGRDPYKDFHIINNELEIYSPALAAKKQIVAANKIDLIAESNILQELRRK 320 Query: 296 LATQCGQVPFEFSSITGHGIPQILEC 321 + + Q F ++TG GI +LE Sbjct: 321 IEAEGYQF-FPICTLTGEGINPLLEA 345 >gi|221194589|ref|ZP_03567646.1| Obg family GTPase CgtA [Atopobium rimae ATCC 49626] gi|221185493|gb|EEE17883.1| Obg family GTPase CgtA [Atopobium rimae ATCC 49626] Length = 471 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 140/341 (41%), Positives = 206/341 (60%), Gaps = 12/341 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + ++ GDGGAG +SFRRE F+ GGPDGG GG GG+V + A L++LID+RY+ Sbjct: 4 FTDLCHINVKGGDGGAGCMSFRREAFVPKGGPDGGDGGHGGNVVVVADPQLSSLIDYRYK 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISL-----ICDLDQEGQRIIL 117 HFKA G G R GA G D+ L VP+GT V E D + I DL +R+I+ Sbjct: 64 HHFKAARGIHGKGARRHGADGADLELRVPLGTVVRELDPTTQEPLYEIADLTSPHERVIV 123 Query: 118 APGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 A GG GG GN HF +S +AP +A G Q+ I L++KL+AD+ ++G+P+ GKS+ +A Sbjct: 124 ASGGRGGLGNTHFVTSVRRAPAFAEKGEPAQDHWIELEMKLMADVALVGMPSVGKSSLIA 183 Query: 178 SVTRAKPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTE 235 ++ A+PKIADYPFTTL PNLG+V K+G + F+ ADIPG+I+ A +G G+G +FL+H E Sbjct: 184 RISAARPKIADYPFTTLIPNLGVVRAKDG-QSFVCADIPGLIEGASEGKGLGHQFLRHIE 242 Query: 236 RTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 RT +L H+V + Y+ I EL AY EL ++ +V ++ D +++ Sbjct: 243 RTALLAHMVDVTGGFEGRDPIDDYRIINRELEAYAPELSRRPMVVLANKCDMPNTEGKVE 302 Query: 292 KKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + +A G F S++TG + +++ + +R E Sbjct: 303 ELRRMAEADGHQFFAISTVTGQNLDELVVWCASTVAELRQE 343 >gi|113969241|ref|YP_733034.1| GTPase ObgE [Shewanella sp. MR-4] gi|114048614|ref|YP_739164.1| GTPase ObgE [Shewanella sp. MR-7] gi|117921655|ref|YP_870847.1| GTPase ObgE [Shewanella sp. ANA-3] gi|123030359|sp|Q0HRZ8|OBG_SHESR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|123130696|sp|Q0HLU0|OBG_SHESM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263087|sp|A0L072|OBG_SHESA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|113883925|gb|ABI37977.1| GTP1/OBG sub domain protein [Shewanella sp. MR-4] gi|113890056|gb|ABI44107.1| GTP1/OBG sub domain protein [Shewanella sp. MR-7] gi|117613987|gb|ABK49441.1| DNA-directed DNA polymerase [Shewanella sp. ANA-3] Length = 388 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 147/341 (43%), Positives = 221/341 (64%), Gaps = 8/341 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG+G +SFRREK+I GGPDGG GG GG V++QA N NTLI++R Sbjct: 1 MKFVDEAVIRVEAGDGGSGCVSFRREKYIPDGGPDGGDGGDGGSVYLQADENHNTLIEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ GE G R+ +G G+D++L VPVGT+ +++ ++ DL GQ++++A G Sbjct: 61 FERFHMAERGENGRGRDCTGHSGKDLILKVPVGTRAIDDETEEVLGDLTTHGQKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSTNRAPRQKTLGTPGEVRSLKLELLLLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 RA PK+ADYPFTTL PNLG+V + F++ADIPG+I+ A +GAG+G RFLKH ER + Sbjct: 181 RATPKVADYPFTTLVPNLGVVNPRPGQSFVIADIPGLIEGAAEGAGLGIRFLKHLERCRI 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHI+ + V +A + I+ EL Y+ +L K + ++ D + D L K Sbjct: 241 LLHIIDIEPIDGTDPVDSA-RAIVGELEKYSPKLASKPRWLVFNKADLLLEDELKEKVAR 299 Query: 296 LATQCGQV--PFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + + G + S+ + G ++ L D I S+ E++ Sbjct: 300 VVKELGWEGDVYTISAYSRDGTKELATKLLDFIQSLPPEDK 340 >gi|154148409|ref|YP_001406257.1| GTPase ObgE [Campylobacter hominis ATCC BAA-381] gi|261266711|sp|A7I166|OBG_CAMHC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|153804418|gb|ABS51425.1| GTP-binding protein Obg/CgtA [Campylobacter hominis ATCC BAA-381] Length = 347 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 134/308 (43%), Positives = 204/308 (66%), Gaps = 4/308 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K + ++G GGAG +SFRREKFI FGGPDGG GG GG+V+ +A N +TL ++ + Sbjct: 2 FVDNVKFHTKAGKGGAGCVSFRREKFILFGGPDGGDGGDGGNVYFKADKNSHTLSKYKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KA++G G R + G KG D+VL VP GT ++++ L+ DL ++G++++ GG Sbjct: 62 KLLKAENGAGGEGRKKFGKKGADLVLIVPPGTSIYDDKTGELLFDLKEDGEKVLALKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKS NQ P YA PG+ G+EK I L+LKLIAD+G++G PN GKST +++++ A Sbjct: 122 GGLGNVHFKSPVNQRPEYAQPGLSGEEKDIRLELKLIADVGLVGFPNVGKSTLISTISNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+V+ + + F++ADIPGII+ A +G G+G +FLKH ERT +LL Sbjct: 182 KPEIANYEFTTLTPKLGMVEVDEFSGFVMADIPGIIEGASEGRGLGIKFLKHIERTKILL 241 Query: 242 HIVSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS--DTLARKKNELAT 298 ++ ++ + + +E + ++ L K+ + L++ DTV++ L +E Sbjct: 242 FMIDMSNYRTLKEQFNALKEESTKFSKNLANKLYAIALTKADTVENTDKMLTEFCDEFGF 301 Query: 299 QCGQVPFE 306 Q+P E Sbjct: 302 GSRQIPNE 309 >gi|322437308|ref|YP_004219520.1| GTP-binding protein Obg/CgtA [Acidobacterium sp. MP5ACTX9] gi|321165035|gb|ADW70740.1| GTP-binding protein Obg/CgtA [Acidobacterium sp. MP5ACTX9] Length = 365 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 139/321 (43%), Positives = 208/321 (64%), Gaps = 9/321 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DEA++ +++GDGG G ++FRREKF+ GGP GG GG GGDV ++++ + NTL+ FR+ Sbjct: 2 FIDEARIRVKAGDGGNGCMAFRREKFVPRGGPSGGDGGHGGDVLMESSLSHNTLVHFRFN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 K+Q G G+ N SG GE +L VPVGT V++++ LI D + + I++A GG Sbjct: 62 PEHKSQRGGHGLGSNCSGYAGEHTILKVPVGTVVYDDETGELIHDFSRVNESIVIARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST+QAP G G+EK L+L+L+AD G++G PN GKST ++ V+ A Sbjct: 122 GGRGNQHFATSTHQAPREHELGRSGEEKNFRLELRLLADAGLVGYPNVGKSTLISRVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG----YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 KPK+A+Y FTTL PNLG+V G + F +AD+PG+I+ AH GAG+G +FLKH ERT Sbjct: 182 KPKVANYEFTTLEPNLGVVSVGDWPHEQSFTIADLPGLIEGAHLGAGLGIQFLKHIERTS 241 Query: 239 VLLHIVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 V++H+V + + Y+ I EL +++ L +K ++ ++ID + D L +K Sbjct: 242 VIVHLVDVSDGSGRPDPVEDYKVITAELKSFDPALAEKPTLLVAAKIDAANPDKL-KKLR 300 Query: 295 ELATQCGQVPFEFSSITGHGI 315 +A + +E S++TG GI Sbjct: 301 AMAKRRKLPLYEISAVTGEGI 321 >gi|331002196|ref|ZP_08325715.1| GTPase obg [Lachnospiraceae oral taxon 107 str. F0167] gi|330411290|gb|EGG90706.1| GTPase obg [Lachnospiraceae oral taxon 107 str. F0167] Length = 425 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 140/335 (41%), Positives = 208/335 (62%), Gaps = 12/335 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK++I+SG GG G +SFRRE F+ GGPDGG GG+GGD+ + LNTL DFR + Sbjct: 2 FADSAKIFIKSGKGGDGHVSFRRELFVAAGGPDGGDGGKGGDIIFEVDEGLNTLTDFRMK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A GE G KR GA + + L VP GT + + + +I D+ +R ++ GG Sbjct: 62 RKYVAGDGEPGGKRKCHGADAKSLTLKVPEGTVIKDFETGKVIADMSGGNKREVILRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GGFGN +F ++T Q P +A PG G+E + L+LK+IAD+G++G PN GKST L+ V+ A Sbjct: 122 GGFGNMNFATATMQVPKFAKPGQPGKEMFVLLELKVIADVGLVGFPNVGKSTLLSRVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL P+LG+V +G F++ADIPG+I+ A +G G+G FLKH ERT VL+ Sbjct: 182 KPKIANYHFTTLDPHLGVVDVKGAGGFVMADIPGLIEGASEGVGLGHDFLKHIERTKVLV 241 Query: 242 HIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V A + + I++EL Y+ L K+ +++ ++ID + + + NE+ Sbjct: 242 HVVDAASTEGRDPVEDIKTIMNELKNYDENLLKRPQLIAANKIDAIYDE----ENNEIER 297 Query: 299 QCGQVP----FEFSSITGHGIPQILECLHDKIFSI 329 P F S ++G GI ++L L + + +I Sbjct: 298 IQAAFPDIKVFPISGVSGKGIQELLYELVNVLSTI 332 >gi|281416873|ref|ZP_06247893.1| GTP-binding protein Obg/CgtA [Clostridium thermocellum JW20] gi|281408275|gb|EFB38533.1| GTP-binding protein Obg/CgtA [Clostridium thermocellum JW20] Length = 424 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 141/322 (43%), Positives = 208/322 (64%), Gaps = 6/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A++YI++GDGG G ISF REK+I GGPDGG GG+GGDV L TL DFRY+ Sbjct: 2 FVDRARIYIKAGDGGDGAISFHREKYISKGGPDGGDGGKGGDVIFVVDEGLRTLQDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++A+ G+ G N SG GED+++ VP GT V +E ++ DL + G+++++A GG Sbjct: 62 TRYRAEDGQNGGSSNCSGRSGEDLIIKVPPGTLVKDEQTGRILADLVKPGKKVVIAKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + Q P +A PG G+E + L+LKL+AD+G+IG PN GKST L+ VT A Sbjct: 122 GGAGNQHFATPRRQVPSFAKPGEPGEELWVILELKLLADVGLIGFPNVGKSTILSMVTAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V + F++ADIPG+I+ AHQG G+G FLKH ERT +L+ Sbjct: 182 QPKIANYHFTTINPNLGVVNIDAENAFVMADIPGLIEGAHQGVGLGHEFLKHIERTKLLI 241 Query: 242 HIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 H+V S + VQ ++ I +EL YN L ++ +I+ +++D ++ K ++ Sbjct: 242 HVVDISGSEGRDPVQ-DFEVINEELKKYNPVLCERPQIIAANKMDVTGAEENLEKFRKVI 300 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 G F S+ + G+ +++ Sbjct: 301 EPRGYKIFPVSAASNKGLKELI 322 >gi|255072563|ref|XP_002499956.1| predicted protein [Micromonas sp. RCC299] gi|226515218|gb|ACO61214.1| predicted protein [Micromonas sp. RCC299] Length = 465 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 132/320 (41%), Positives = 205/320 (64%), Gaps = 1/320 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+ D AK+Y+++GDGG G ++FRRE F+ GGP GG+GG GG ++ +A +N+L+ FR Sbjct: 1 MRCFDTAKIYVKAGDGGRGMVAFRREAFVAQGGPYGGNGGNGGAIYFEADEGINSLVGFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + H +A+ G G + G+ G D + VP GT V +I ++ G R ++ PG Sbjct: 61 KKVHHRAEPGGNGGGKKMQGSDGRDRTVLVPPGTVVRNSQTGEVIAEMFAHGHREMIIPG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FK++ N+AP A G G E + ++L+L+AD+GIIG+PNAGKST LA V+ Sbjct: 121 GRGGRGNASFKTAKNKAPQIAENGEEGMEMWVEMELRLVADVGIIGVPNAGKSTLLAGVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTT+ PNLG+V+ Y + ADIPG+++ A +G G+G FL+H +RT VL Sbjct: 181 NAKPKIADYPFTTIVPNLGVVERDYARMVFADIPGLLEGASEGIGLGFEFLRHVKRTRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID-TVDSDTLARKKNELATQ 299 +H++ ++V Y+ I +E+ ++ E+ +K EIV L+++D + ++ T A + E Sbjct: 241 VHVLDCTSKDVMDEYEAIRNEIHLFDPEVGEKPEIVALNKVDASEEAATRALELQEEFRD 300 Query: 300 CGQVPFEFSSITGHGIPQIL 319 G S++ G G+ +++ Sbjct: 301 FGIDAHVVSALDGSGVAELV 320 >gi|225021698|ref|ZP_03710890.1| hypothetical protein CORMATOL_01726 [Corynebacterium matruchotii ATCC 33806] gi|224945689|gb|EEG26898.1| hypothetical protein CORMATOL_01726 [Corynebacterium matruchotii ATCC 33806] Length = 507 Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 145/344 (42%), Positives = 208/344 (60%), Gaps = 23/344 (6%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D+ +++ +GDGG G S REKF GGPDGG+GG GGD+ ++ ++ ++TL+D Y Sbjct: 3 RFVDQVTLHLTAGDGGNGCASIHREKFKPLGGPDGGNGGHGGDIILEVSAQVHTLLDLHY 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H KA+ G G +R+GA+G D+VL VPVGT V E G L DL G R I A GG Sbjct: 63 RPHLKAERGSNGAGDHRNGARGADLVLPVPVGTVVLSESGEQL-ADLTAVGMRFIAARGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA SS +AP +A G G++ + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 FGGLGNAALASSVRKAPGFALRGEPGEQHDVVLELKSVADVGLVGFPSAGKSSLISVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKI DYPFTTL PNLG+V G++ F +AD+PG+I A +G G+G FL+H ERT VL+ Sbjct: 182 AKPKIGDYPFTTLQPNLGVVDVGHETFTIADVPGLIPGASEGKGLGLDFLRHIERTAVLV 241 Query: 242 HIVSALEENVQAAYQCILD------ELSAYNS---------ELRKKIEIVGLSQIDTVDS 286 H+V +++ I D EL+AY S +LR + I+ L++ D D+ Sbjct: 242 HVVDT--ASIEPGRDPISDIEALEAELAAYESILVGDAGLGDLRDRPRIIVLNKADIPDA 299 Query: 287 DTLAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 LA K +L Q G F S++ G LE L K+ I Sbjct: 300 AELAEFVKEDLEQQFGWPVFIVSAVARKG----LEPLKYKLLEI 339 >gi|123965483|ref|YP_001010564.1| GTPase ObgE [Prochlorococcus marinus str. MIT 9515] gi|261277677|sp|A2BUJ6|OBG_PROM5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|123199849|gb|ABM71457.1| GTP1/OBG family [Prochlorococcus marinus str. MIT 9515] Length = 327 Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 136/330 (41%), Positives = 210/330 (63%), Gaps = 7/330 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A + +++G GG G +SFRREKF+ GGP GG+GG+GG + + A +NL TL+DF+ Sbjct: 1 MQFIDQANIILKAGKGGNGIVSFRREKFVPAGGPSGGNGGKGGSIILVADNNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + A+ G KG RSGA GE+ +L VP GT+V + ++ DL + Q + +A G Sbjct: 61 FNREIFAKDGFKGGPNKRSGASGENTILKVPCGTEVRDVHTGIILGDLTIDKQSLTIAHG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIW---LKLKLIADIGIIGLPNAGKSTFLA 177 G GG GNA++ S+ N+AP G QE IW L+LKL+A++GIIGLPNAGKST ++ Sbjct: 121 GRGGHGNAYYLSNQNRAPESFTEG---QEGEIWEVQLELKLLAEVGIIGLPNAGKSTLIS 177 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTER 236 ++ A+PKIA+YPFTTL PNLG+V++ + ADIPG+I A +G G+G FL+H +R Sbjct: 178 VLSSARPKIANYPFTTLIPNLGVVRKADGNGCLFADIPGLISGAAEGVGLGHDFLRHIQR 237 Query: 237 THVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 T +L+H++ ++ EN ++ I EL Y + L +K I+ L++ + +D + L +L Sbjct: 238 TKILIHVIDSIAENPIHDFEIIEKELKQYGNGLLEKERIIVLNKKELIDENYLKIIIKKL 297 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + SS G+P +L + ++I Sbjct: 298 ENLSKKKVLVISSALREGLPSLLSEVWNRI 327 >gi|241889665|ref|ZP_04776963.1| Obg family GTPase CgtA [Gemella haemolysans ATCC 10379] gi|241863287|gb|EER67671.1| Obg family GTPase CgtA [Gemella haemolysans ATCC 10379] Length = 434 Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 141/328 (42%), Positives = 209/328 (63%), Gaps = 6/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLDE K+++RSGDGG G ++FRREK++ GGP GG GGRG +V L T +D+RYQ Sbjct: 2 FLDEVKIFVRSGDGGNGLVAFRREKYVPKGGPAGGDGGRGANVVFIVDEGLRTFMDYRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A +GE GM + G K +D+ L VP GT + + D ++ DL + Q +++A GG Sbjct: 62 KKFVAPNGENGMSKGMHGRKSKDLYLKVPPGTVIRDTDTGEVLADLVEHEQEVVVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + +N AP A G G+E+ + L+LKL+AD+G++G P+ GKST L+ ++A Sbjct: 122 GGRGNCRFATPSNPAPEIAENGEPGEERNLTLELKLMADVGLVGFPSVGKSTLLSITSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+V+ + ++ F++AD+PG+I+ A QG G+G +FL+H ERT V++ Sbjct: 182 KPKIADYHFTTLAPNLGVVETKDHRSFVMADLPGLIEGASQGVGLGHQFLRHIERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT-VDSDTLARKKNELA 297 H+V SA + + Y+ I EL+ YN L ++ ++V +++D V SD L K L Sbjct: 242 HVVDMSATDGRDPYEDYKIINQELAEYNMRLLERPQVVVANKMDIPVASDNLKEFKKHLE 301 Query: 298 TQCGQVPF-EFSSITGHGIPQILECLHD 324 +V E S+ T I +L + D Sbjct: 302 NDGEEVDIVEISAFTRSNIDNLLYKISD 329 >gi|283955540|ref|ZP_06373035.1| GTP-binding protein, GTP1/Obg family [Campylobacter jejuni subsp. jejuni 1336] gi|283793001|gb|EFC31775.1| GTP-binding protein, GTP1/Obg family [Campylobacter jejuni subsp. jejuni 1336] Length = 345 Score = 229 bits (583), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 144/341 (42%), Positives = 218/341 (63%), Gaps = 13/341 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ + SGDGG G +SFRREK + GGPDGG GG GGD+ +N +TL++F+ + Sbjct: 2 FIDSVKITLASGDGGKGAVSFRREKHVPLGGPDGGDGGNGGDIIFVCDNNTHTLVNFKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +AQ+G GM RN++G KGE++ L VP GTQV + ++ DL +EGQ+ + GG Sbjct: 62 RELRAQNGAGGMGRNKNGKKGENLELIVPEGTQVIDAQTNEILLDLTKEGQKELFLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK +TNQ P YA PGI G+ +++ L+LKLIAD+G++G PN GKST ++ V+ A Sbjct: 122 GGLGNTHFKHATNQRPDYAQPGIKGESRLVRLELKLIADVGLVGFPNVGKSTLISVVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+V + Y F++ADIPGII+ A G G+G FLKH ERT LL Sbjct: 182 KPEIANYEFTTLTPKLGLVDVDEYNSFVMADIPGIIEGASGGKGLGLAFLKHIERTSFLL 241 Query: 242 HIVSALEEN-VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-----SDTLARKKNE 295 ++ + E ++ + + EL +++EL + + +S+ D+V+ ++ +A NE Sbjct: 242 FVLDPMREMPLKEQFIVLRKELEKFSNELFGRKFGIMISKSDSVNLGEEFAEQIALNINE 301 Query: 296 LATQCGQV--PFEF----SSITGHGIPQILECLHDKIFSIR 330 L ++ P F SS+ G+ ++ L ++I ++R Sbjct: 302 LENYLKEINNPQSFLIKVSSLEKTGLKELKFMLLEEIKTLR 342 >gi|314936243|ref|ZP_07843590.1| Obg family GTPase CgtA [Staphylococcus hominis subsp. hominis C80] gi|313654862|gb|EFS18607.1| Obg family GTPase CgtA [Staphylococcus hominis subsp. hominis C80] Length = 430 Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 138/333 (41%), Positives = 211/333 (63%), Gaps = 7/333 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFR+Q Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVIFEVDEGLRTLLDFRFQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE G N G ED+VL VP GT + + ++ DL +EGQR ++A GG Sbjct: 62 RHFKAKKGENGQSSNMHGKNAEDLVLKVPPGTIIKSVETEEVLADLVEEGQRAVIARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSENGEPGEELDVTLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V ++ F++AD+PG+I+ A +G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDHRSFVMADLPGLIEGASEGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S E + YQ I +EL Y L + +I+ + +D ++ D L K E+ Sbjct: 242 HMIDMSGSEGRDPLEDYQIINNELINYKQRLEDRPQIIVANIMDIPEAKDNLELFKKEID 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 + VP S+IT I Q+L + DK+ ++ Sbjct: 302 EEVTIVP--VSTITRDNIDQLLYTIADKLEEVK 332 >gi|24375148|ref|NP_719191.1| GTPase ObgE [Shewanella oneidensis MR-1] gi|81589070|sp|Q8EB83|OBG_SHEON RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|24349922|gb|AAN56635.1|AE015800_8 GTP-binding protein, GTP1/Obg family [Shewanella oneidensis MR-1] Length = 388 Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 139/306 (45%), Positives = 205/306 (66%), Gaps = 6/306 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG+G +SFRREK+I GGPDGG GG GG V+++A N NTLI++R Sbjct: 1 MKFVDEAVIRVEAGDGGSGCVSFRREKYIPDGGPDGGDGGDGGSVYLEADENFNTLIEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ GE G R+ +G G+D++L VPVGT+ + D ++ DL GQ++++A G Sbjct: 61 FERFHMAERGENGRGRDCTGHSGKDLILKVPVGTRAIDHDTEEVLGDLTTHGQKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSTNRAPRQKTLGTPGEVRSLKLELLLLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 RA PK+ADYPFTTL PNLG+V + +++ADIPG+I+ A +GAG+G RFLKH ER + Sbjct: 181 RATPKVADYPFTTLVPNLGVVNPRPGQSYVIADIPGLIEGAAEGAGLGIRFLKHLERCRI 240 Query: 240 LLHIVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHI+ + V +A + I+ EL Y+ +L K + ++ D + D L K Sbjct: 241 LLHIIDIEPIDGTDPVDSA-RAIVGELEKYSPKLASKPRWLVFNKADLLLEDELKEKAER 299 Query: 296 LATQCG 301 + + G Sbjct: 300 VVKELG 305 >gi|213966158|ref|ZP_03394344.1| Spo0B-associated GTP-binding protein [Corynebacterium amycolatum SK46] gi|213951173|gb|EEB62569.1| Spo0B-associated GTP-binding protein [Corynebacterium amycolatum SK46] Length = 505 Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 137/342 (40%), Positives = 210/342 (61%), Gaps = 14/342 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++++GDGG G S REKF GGPDGG+GG GGD+ ++TL+DF + Sbjct: 3 RFVDRVVLHLQAGDGGHGCNSVLREKFKPLGGPDGGNGGHGGDIVFVVDPQIHTLMDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H KA +G+ G +R+GA+GED+VL VP GT V EDG ++ D+ +G R I A GG Sbjct: 63 HPHIKAANGKPGAGDHRNGARGEDLVLGVPEGTVVMTEDG-EVLADMTGKGARFIAAEGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA + +AP +A G G+ K + L+LK +AD+G++G P+AGKS+ +++++ Sbjct: 122 YGGLGNAALANKNRRAPGFALLGEPGEAKDLVLELKSMADVGLVGFPSAGKSSLVSTLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKI DYPFTTL PNLG+V GY+ F +AD+PG+I A +G G+G FL+H ER VL+ Sbjct: 182 AKPKIGDYPFTTLQPNLGVVNVGYESFTIADVPGLIPGASEGRGLGLDFLRHIERCAVLV 241 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKI---------EIVGLSQIDTVDSDT 288 H+V A + + + Q + EL+ Y S L+ + ++ L++ID D+ Sbjct: 242 HVVDAAALEGDRDPVSDIQALEAELANYQSVLKADVGLGDLAERPRVIVLNKIDLPDARE 301 Query: 289 LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 + + E + G +E S++T G+ ++ L D+I + R Sbjct: 302 MIDMQREELEKFGWPIYEISTVTHEGLKELTYGLKDQIAAYR 343 >gi|167767400|ref|ZP_02439453.1| hypothetical protein CLOSS21_01919 [Clostridium sp. SS2/1] gi|317496731|ref|ZP_07955061.1| obg family GTPase CgtA [Lachnospiraceae bacterium 5_1_63FAA] gi|167711375|gb|EDS21954.1| hypothetical protein CLOSS21_01919 [Clostridium sp. SS2/1] gi|291559284|emb|CBL38084.1| Obg family GTPase CgtA [butyrate-producing bacterium SSC/2] gi|316895743|gb|EFV17895.1| obg family GTPase CgtA [Lachnospiraceae bacterium 5_1_63FAA] Length = 427 Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 145/324 (44%), Positives = 207/324 (63%), Gaps = 7/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D A + IRSG GG G +SFRRE ++ GGPDGG GGRGGDV +NTL D+R++ Sbjct: 2 FADRANIIIRSGKGGDGHVSFRRELYVPNGGPDGGDGGRGGDVIFVVDEGINTLSDYRHR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA G++G +R GA GED++L VP GT V +++ +I D+ + + ++L GG Sbjct: 62 RKFKAGDGQEGGRRKCHGADGEDIILKVPAGTVVKDKESGKVILDMSNKKEPVVLLKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+ + T QAP YA PG QE + L+LK+IAD+G++G PN GKSTFL+ VT A Sbjct: 122 GGKGNQHYATPTMQAPKYAQPGGKAQELEVMLELKVIADVGLVGFPNVGKSTFLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 PKIA+Y FTTL PNLG+V +G K F++ADIPGII+ A +G G+G FL+H ERT V++ Sbjct: 182 NPKIANYHFTTLNPNLGVVDMDGSKGFVIADIPGIIEGASEGVGLGFEFLRHIERTKVMI 241 Query: 242 HIV---SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKNE 295 H+V S + I DEL YN E+ +K +++ +++D + D +T+ E Sbjct: 242 HMVDGASVEGRDPIVDIHAITDELKKYNKEILEKPQVIAANKMDAMSETDRETVIDLLKE 301 Query: 296 LATQCGQVPFEFSSITGHGIPQIL 319 G F S+++G G+ ++L Sbjct: 302 EFEPEGIKVFPISAVSGEGVKELL 325 >gi|154496457|ref|ZP_02035153.1| hypothetical protein BACCAP_00749 [Bacteroides capillosus ATCC 29799] gi|150274540|gb|EDN01617.1| hypothetical protein BACCAP_00749 [Bacteroides capillosus ATCC 29799] Length = 425 Score = 228 bits (582), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 134/322 (41%), Positives = 208/322 (64%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A++ +RSG+GG G ++F REK++ GGPDGG GG+GGDV ++ +L+TL+DFRY+ Sbjct: 4 FIDTARITVRSGNGGNGAVAFHREKYVAAGGPDGGDGGQGGDVILKTDRHLSTLMDFRYK 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A++G+ G + +G G D+++ VPVGT V + + +ICD+ + + +LA GG Sbjct: 64 RKYVAENGQDGQGKRCTGKDGADLIIKVPVGTVVKDGETGEIICDMSGD-EPFVLARGGK 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN HF + T Q P +A G+ G + + L+LKL+AD+G++G PN GKST L+ V++A Sbjct: 123 GGWGNQHFATPTRQVPRFAKAGLPGVTREVVLELKLLADVGLVGFPNVGKSTLLSVVSKA 182 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 PKIA+Y FTTLYPNLG+V +EG F++ADIPGII+ A +GAG+G FL+H +R +L Sbjct: 183 NPKIANYHFTTLYPNLGVVYVEEG-TSFVMADIPGIIEGASEGAGLGHDFLRHIDRCRLL 241 Query: 241 LHI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +H+ VS E + ++ I EL+ Y+ +L + IV ++ D TL K Sbjct: 242 IHVVDVSGCEGRDPVEDFETINRELAEYSPQLASRPMIVAANKTDIAFDRTLVDKLKAHV 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 G +E S+ G+ ++ Sbjct: 302 EAKGMTFYEISAAAQKGVRDLV 323 >gi|94266081|ref|ZP_01289799.1| GTP-binding protein, HSR1-related:GTP1/OBG subdomain [delta proteobacterium MLMS-1] gi|93453364|gb|EAT03795.1| GTP-binding protein, HSR1-related:GTP1/OBG subdomain [delta proteobacterium MLMS-1] Length = 357 Score = 228 bits (582), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 149/328 (45%), Positives = 212/328 (64%), Gaps = 8/328 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DE K Y+++GDGG G +SFRREK + GGPDGG GG+GGDV I+ ++ L++L+DF+ Sbjct: 1 MSFIDETKFYVKAGDGGNGCVSFRREKHVPKGGPDGGDGGKGGDVIIEVSARLSSLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+ HFKA+ G G + G KG D V+ VP GT + + + L+ DL +GQR + A G Sbjct: 61 YRSHFKAEDGAHGQGSKKHGKKGGDCVVAVPPGTVLRDAESGELLADLVADGQRYLAAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF S N+AP A G G+E L+LKLIA++G+IGLPNAGKST L +T Sbjct: 121 GKGGKGNVHFASGANRAPRTATKGKSGEEFWFNLELKLIAEVGLIGLPNAGKSTLLTRLT 180 Query: 181 RAKPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTL P LG++ E +ADIPG+I +AH GAG+G FL+H ERT + Sbjct: 181 AATPKVADYPFTTLAPQLGVLFFEQRPPCTIADIPGLIADAHLGAGLGHTFLRHIERTRL 240 Query: 240 LLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 L+ ++ A LE + Y + EL++Y +L ++ +V L++ID + D L + EL Sbjct: 241 LVQVIDASGLEGDPLEQYDILERELASYQQDLLQRPRLVVLNKIDLLGDDGL--QWQELV 298 Query: 298 TQCGQ---VPFEFSSITGHGIPQILECL 322 + G+ P S++ G G+ +++E L Sbjct: 299 ERFGRRGVTPLAVSALGGQGVQRLIEAL 326 >gi|21230609|ref|NP_636526.1| GTPase ObgE [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769395|ref|YP_244157.1| GTPase ObgE [Xanthomonas campestris pv. campestris str. 8004] gi|188992582|ref|YP_001904592.1| GTPase ObgE [Xanthomonas campestris pv. campestris str. B100] gi|81304648|sp|Q4US36|OBG_XANC8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|81795663|sp|Q8PBH0|OBG_XANCP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277749|sp|B0RY32|OBG_XANCB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|21112189|gb|AAM40450.1| GTP-binding protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574727|gb|AAY50137.1| GTP-binding protein [Xanthomonas campestris pv. campestris str. 8004] gi|167734342|emb|CAP52552.1| GTP-binding protein, probable [Xanthomonas campestris pv. campestris] Length = 350 Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 144/292 (49%), Positives = 200/292 (68%), Gaps = 8/292 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MK +DEA++ + +G+GG G + FRREKFI GGPDGG GG GG VWI A N+NTL+DFR Sbjct: 1 MKLVDEAEILVTAGNGGNGCVGFRREKFIPLGGPDGGDGGNGGSVWIVADENVNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ FKAQ GE GM R G GED V+ VPVGT V +I D+ Q G R+++A G Sbjct: 61 HERAFKAQRGENGMGRQAYGKGGEDRVIVVPVGTVVMNVQTDEIIGDMTQHGDRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+AP + G G+E+++ L+LKL+AD+G++G PNAGKST + +V+ Sbjct: 121 GKGGLGNMHFKSSVNRAPRQSTTGEEGEERLLKLELKLLADVGLLGFPNAGKSTLIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTLYPNLG+V E Y+ F++AD+PG+I+ A GAG+G +FL+H +RT + Sbjct: 181 AATPKVADYPFTTLYPNLGVVSVEAYRSFVIADVPGLIEGAADGAGLGTQFLRHLQRTRL 240 Query: 240 LLHIV--SALEENVQAA-----YQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH+V S ++ V + I EL ++ L +K + L++ D + Sbjct: 241 LLHLVDISPMDGGVDGVSPVDQVRTIERELERHDPALLEKPRWLVLNKADLM 292 >gi|153952548|ref|YP_001397350.1| GTPase ObgE [Campylobacter jejuni subsp. doylei 269.97] gi|261266713|sp|A7H1H0|OBG_CAMJD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|152939994|gb|ABS44735.1| GTP-binding protein, GTP1/Obg family [Campylobacter jejuni subsp. doylei 269.97] Length = 345 Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 144/341 (42%), Positives = 216/341 (63%), Gaps = 13/341 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ + SGDGG G +SFRREK + GGPDGG GG GGD+ +N +TL++F+ + Sbjct: 2 FIDSVKITLASGDGGKGAVSFRREKHVPLGGPDGGDGGNGGDIIFICDNNTHTLVNFKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +AQ+G GM RN++G KGE++ L VP GTQV + ++ DL +EGQR + GG Sbjct: 62 RELRAQNGAGGMGRNKNGKKGENLELVVPEGTQVIDAQTNEILLDLTKEGQRELFLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK +TNQ P YA PGI G+ +++ L+LKLIAD+G++G PN GKST ++ V+ A Sbjct: 122 GGLGNTHFKHATNQRPDYAQPGIKGESRLVRLELKLIADVGLVGFPNVGKSTLISVVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+V + Y F++ DIPGII+ A G G+G FLKH ERT LL Sbjct: 182 KPEIANYEFTTLTPKLGLVDVDEYNSFVMTDIPGIIQGASGGKGLGLAFLKHIERTSFLL 241 Query: 242 HIVSALEEN-VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-----SDTLARKKNE 295 ++ + E ++ + + EL ++ EL + + +S+ D+V+ ++ +A NE Sbjct: 242 FVLDPMREMLLKEQFIVLRKELEKFSDELFGRKFGIMISKSDSVNLGEEFAEQIALNINE 301 Query: 296 LATQCGQV--PFEF----SSITGHGIPQILECLHDKIFSIR 330 L ++ P F SS+ G+ ++ L ++I ++R Sbjct: 302 LENYLKEINNPQSFLIKVSSLEKTGLKELKFMLLEEIKALR 342 >gi|225568004|ref|ZP_03777029.1| hypothetical protein CLOHYLEM_04077 [Clostridium hylemonae DSM 15053] gi|225163178|gb|EEG75797.1| hypothetical protein CLOHYLEM_04077 [Clostridium hylemonae DSM 15053] Length = 428 Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 147/332 (44%), Positives = 212/332 (63%), Gaps = 9/332 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK++IRSG GG G +SFRRE ++ GGPDGG GGRGGDV + LNTL D+R++ Sbjct: 2 FADRAKIFIRSGKGGDGHVSFRRELYVPNGGPDGGDGGRGGDVIFEVDEGLNTLQDYRHR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A GE+G KR GA +D+VL VP GT + E + +I D+ + +R ++ GG Sbjct: 62 RKYAANDGEQGGKRRCHGADADDIVLKVPEGTVIKEAESGKVIADMSGDNKRQVVLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF ++T Q P YA PG QE + L+LK+IAD+G+IG PN GKSTFL+ VT A Sbjct: 122 GGLGNQHFATATMQIPKYAQPGQPSQELWVNLELKVIADVGLIGFPNVGKSTFLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V +G + F++ADIPG+I+ A +G G+G FL+H ERT +++ Sbjct: 182 RPKIANYHFTTLNPNLGVVDLDGAQGFVIADIPGLIEGASEGVGLGHEFLRHIERTKMMI 241 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKN 294 H+V A V+ Y+ I EL AYN ++ K+ +++ ++ D + DS+ + Sbjct: 242 HVVDAAGSEGRSPVEDVYK-INAELEAYNPDIAKRPQVIAANKTDLIYSGDSEDPVKLLK 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E G F S TG GI ++L + +++ Sbjct: 301 EEFEPKGIRVFAISGATGDGISELLYYVSEQL 332 >gi|152993365|ref|YP_001359086.1| GTP-binding protein Obg [Sulfurovum sp. NBC37-1] gi|261277716|sp|A6QB70|OBG_SULNB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|151425226|dbj|BAF72729.1| GTP-binding protein Obg [Sulfurovum sp. NBC37-1] Length = 373 Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 131/287 (45%), Positives = 184/287 (64%), Gaps = 2/287 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GGAG ISF EKF+ GGPDGG GGRGG V+ + +N +TL R + Sbjct: 2 FVDSVELLISSGKGGAGAISFWTEKFVIKGGPDGGDGGRGGSVFFKVDNNTDTLSGLRGR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA++G G R + G KG+D + VP GT V + + + DL +EGQ + GG Sbjct: 62 NHIKAENGRPGEGRKKYGRKGQDTTIIVPPGTTVVDMETGEELLDLVEEGQVVKFLEGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSSTNQ P YA PG+ G K + L++KLIAD+G++G PN GKST +A+++ A Sbjct: 122 GGLGNMHFKSSTNQRPTYAQPGLPGITKQVRLEMKLIADVGLVGYPNVGKSTLIATLSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P++A+Y FTTL P LG+V Y F++ADIPGII+ A G G+G FLKH ERT LL Sbjct: 182 RPQVANYEFTTLTPKLGVVHISDYDSFMMADIPGIIEGASDGRGLGLEFLKHIERTKTLL 241 Query: 242 HIVSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 ++ A ++ Y+ +L EL Y+ L + + +++ID++ D Sbjct: 242 LMIDAANYREMKYQYETLLVELDRYSETLAGRKHAIAITKIDSLSQD 288 >gi|262282533|ref|ZP_06060301.1| GTPase ObgE [Streptococcus sp. 2_1_36FAA] gi|262261824|gb|EEY80522.1| GTPase ObgE [Streptococcus sp. 2_1_36FAA] Length = 436 Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 145/329 (44%), Positives = 210/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIQVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKAQSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETGKVLTDLVENGQEFIVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELLLELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTHSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E N Y I EL +YN L ++ +I+ +++D DS + L K +LA Sbjct: 244 HVIDMSASEGRNPYEDYLAINKELESYNLRLMERPQIIVANKMDMPDSAENLKVFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+T G+ +L+ Sbjct: 304 ANYDEFAELPQIFPISSLTKQGLATLLDA 332 >gi|33860778|ref|NP_892339.1| GTPase ObgE [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|81835618|sp|Q7V368|OBG_PROMP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|33633720|emb|CAE18677.1| GTP1/OBG family [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 327 Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 135/327 (41%), Positives = 209/327 (63%), Gaps = 1/327 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A + +++G GG G +SFRREKF+ GGP GG+GG+GG + I A +NL TL+DF+ Sbjct: 1 MQFIDQANIILKAGKGGNGIVSFRREKFVPAGGPSGGNGGKGGSIIIIADNNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + A+ G KG RSGA GE+ +L VP GT++ + + ++ DL ++ Q + +A G Sbjct: 61 FNREIFAKDGFKGGPNKRSGASGENTILKVPCGTEIRDFNTGIILGDLTEDKQSLTIAHG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA++ S+ N+AP G G+ + L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GRGGHGNAYYLSNQNRAPESFTEGKEGEIWEVQLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL PNLG+V++ + ADIPG+I A +G G+G FL+H +RT + Sbjct: 181 SARPKIANYPFTTLIPNLGVVRKADGNGCLFADIPGLISGAAEGVGLGHDFLRHIQRTKI 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H++ ++ EN ++ I EL Y S L K IV L++++ VD + L +L Sbjct: 241 LIHLIDSIAENPIRDFEIIEKELKRYGSGLLNKERIVVLNKMELVDENYLQTITKKLENL 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKI 326 + SS G+ +L + +I Sbjct: 301 SKKKVLVISSSLRKGLSPLLSEVWKRI 327 >gi|320528321|ref|ZP_08029483.1| Obg family GTPase CgtA [Solobacterium moorei F0204] gi|320131235|gb|EFW23803.1| Obg family GTPase CgtA [Solobacterium moorei F0204] Length = 424 Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 120/283 (42%), Positives = 187/283 (66%), Gaps = 3/283 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 +D K+++++GDGG G +++R EKF GGP GG GG+GGD+W +N TL+ ++ Sbjct: 1 MIDLVKLHVKAGDGGRGCVAWRHEKFYANGGPFGGDGGKGGDIWFAVDTNETTLMKLKFT 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KA +G G+ + G G+D+++ VP+GT + L+ DL + GQ++++A GG Sbjct: 61 RKIKAGNGMPGLIKKMHGKSGDDIIVPVPLGTMIRNATNGDLLADLTKPGQKVLIARGGK 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF ++ N AP YA PG +G+ + ++L+L+AD G+IG P+ GKSTFL+ VTRA Sbjct: 121 GGLGNMHFATARNDAPEYAQPGEVGESLDVQVELRLLADAGLIGFPSVGKSTFLSVVTRA 180 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 P+IA YPFTTL PN+G+V+ + F+LAD+PG+I+ A +G G+G FL+H +R VL+ Sbjct: 181 NPQIAAYPFTTLEPNIGVVQMPNGRSFVLADMPGLIEGAGEGKGLGHEFLRHIKRCRVLI 240 Query: 242 HIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 H++ S E N Y+ I EL+ Y+ L K+ +IV +++D Sbjct: 241 HVIDMSGAERNPVEDYEIINKELTTYDLALEKRPQIVVANKMD 283 >gi|227548743|ref|ZP_03978792.1| GTPase ObgE [Corynebacterium lipophiloflavum DSM 44291] gi|227079155|gb|EEI17118.1| GTPase ObgE [Corynebacterium lipophiloflavum DSM 44291] Length = 503 Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 143/345 (41%), Positives = 212/345 (61%), Gaps = 19/345 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D A +++++GDGG G +S REKF GGPDGG+GG GGD+ + ++ ++TL+DF++ Sbjct: 3 QFVDRAHLHLQAGDGGHGCVSVHREKFKPLGGPDGGNGGHGGDIIFEVSAQVHTLLDFQF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H KA+ G G NR+GA+G+D++L VPVGT V DG ++ DL G R + A GG Sbjct: 63 RPHLKAKRGANGAGDNRNGARGDDLILEVPVGTVVRSVDG-EILADLTVPGTRFVAAEGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S+ +AP +A G G+ + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 FGGLGNAALASTKRKAPGFALKGEPGEAHELVLELKSMADVGLVGFPSAGKSSLISVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A QG G+G FL+H ERT VL Sbjct: 182 AKPKIADYPFTTLQPNLGVVDVGNDTFTIADVPGLIPGASQGKGLGLDFLRHIERTAVLA 241 Query: 242 HIV---------------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 HIV ALE + A+Y LD S +LR + ++ L+++D D+ Sbjct: 242 HIVDTATMDPGRDPLSDIDALEAEL-ASYAEELDTDSGLG-DLRDRPRLIVLNKMDIPDA 299 Query: 287 DTLAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 LA + +L + G F S+ T G+ ++ L D + + R Sbjct: 300 RELADFLEEDLKQRFGWPIFTISTATREGLDELKWALWDIVRAAR 344 >gi|294101841|ref|YP_003553699.1| GTP-binding protein Obg/CgtA [Aminobacterium colombiense DSM 12261] gi|293616821|gb|ADE56975.1| GTP-binding protein Obg/CgtA [Aminobacterium colombiense DSM 12261] Length = 438 Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 134/323 (41%), Positives = 209/323 (64%), Gaps = 5/323 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D ++ +R+G GG G ISFRREKF+ GGPDG +GG GG++ ++A ++TL DF Sbjct: 1 MKFVDLVRIMVRAGRGGNGCISFRREKFVPKGGPDGANGGNGGNIILKAVEGIHTLADFE 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+HGE G + + G G+D+++ VP GT V++E+ + DL + G +++ A G Sbjct: 61 FEKKFRAEHGEPGQGQKKVGKTGKDLIILVPCGTIVYDENTGEPLADLVEPGDQVVAAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF +S + P +A G G+E+ + L+LKLIAD+G++GLPNAGKS+ LA+++ Sbjct: 121 GRGGRGNMHFATSMRRVPRFAEKGDEGEERNLRLELKLIADVGLVGLPNAGKSSLLAAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIA YPFTTL PNLGI+ ++AD+PG+I+ AH+ G+G FL+H ERT VL Sbjct: 181 NARPKIAGYPFTTLSPNLGILAVDDDRIVVADVPGLIEGAHENKGLGIYFLRHIERTRVL 240 Query: 241 LHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +H++ E+V ++ I E AY L ++ +V ++ID ++ E Sbjct: 241 IHVLDLSVGTPEDVLYQWEVICSEFKAYKESLLERPYMVVGNKID-IERGHENAPAIESF 299 Query: 298 TQCGQVP-FEFSSITGHGIPQIL 319 + +P + S+ITG GI + + Sbjct: 300 MKARNIPYYNTSAITGEGIAEFM 322 >gi|86151239|ref|ZP_01069454.1| GTP-binding protein, GTP1/Obg family [Campylobacter jejuni subsp. jejuni 260.94] gi|85841586|gb|EAQ58833.1| GTP-binding protein, GTP1/Obg family [Campylobacter jejuni subsp. jejuni 260.94] Length = 345 Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 143/341 (41%), Positives = 218/341 (63%), Gaps = 13/341 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ + SGDGG G +SFRREK + GGPDGG GG GGD+ +N +TL++F+ + Sbjct: 2 FIDSVKITLASGDGGKGAVSFRREKHVPLGGPDGGDGGNGGDIIFVCDNNTHTLVNFKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +AQ+G GM RN++G KGE++ L VP GTQV + ++ DL +EGQ+ + GG Sbjct: 62 RELRAQNGAGGMGRNKNGKKGENLELIVPEGTQVIDAQTNEILLDLTKEGQKELFLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK +TNQ P YA PGI G+ +++ L+LKLIAD+G++G PN GKST ++ V+ A Sbjct: 122 GGLGNTHFKHATNQRPDYAQPGIKGESRLVRLELKLIADVGLVGFPNVGKSTLISVVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+V + Y F++ADIPGII+ A G G+G FLKH ERT LL Sbjct: 182 KPEIANYEFTTLTPKLGLVDVDEYNSFVMADIPGIIEGASGGKGLGLAFLKHIERTSFLL 241 Query: 242 HIVSALEE-NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-----SDTLARKKNE 295 ++ + E +++ + + EL +++EL + + +S+ D+V+ ++ + NE Sbjct: 242 FVLDPMREMHLKEQFIVLRKELEKFSNELFGRKFGIMISKSDSVNLGEEFAEQITLNINE 301 Query: 296 LATQCGQV--PFEF----SSITGHGIPQILECLHDKIFSIR 330 L ++ P F SS+ G+ ++ L ++I ++R Sbjct: 302 LENYLKEINNPQSFLIKVSSLEKTGLKELKFMLLEEIKTLR 342 >gi|329769946|ref|ZP_08261344.1| GTPase obg [Gemella sanguinis M325] gi|328837550|gb|EGF87176.1| GTPase obg [Gemella sanguinis M325] Length = 434 Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 142/328 (43%), Positives = 209/328 (63%), Gaps = 6/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLDE K+++RSGDGG G ++FRREK++ GGP GG GGRG +V L T +D+RYQ Sbjct: 2 FLDEVKIFVRSGDGGNGLVAFRREKYVPKGGPAGGDGGRGANVVFIVDEGLRTFMDYRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A +GE GM + G K +D+ L VP GT + + D ++ DL + Q +I+A GG Sbjct: 62 KKFVAPNGENGMSKGMHGRKSKDLYLKVPPGTVISDTDTGEVLADLVEHEQEVIVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + +N AP A G G+E+ + L+LKL+AD+G++G P+ GKST L+ ++A Sbjct: 122 GGRGNCRFATPSNPAPEIAENGEPGEERNLTLELKLMADVGLVGFPSVGKSTLLSITSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+V+ + ++ F++AD+PG+I+ A QG G+G +FL+H ERT V++ Sbjct: 182 KPKIADYHFTTLAPNLGVVETKDHRSFVMADLPGLIEGASQGVGLGHQFLRHIERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT-VDSDTLARKKNELA 297 H++ SA + + Y+ I EL YN L ++ +IV +++D V S+ L K LA Sbjct: 242 HVIDMSATDGRDPYEDYKVINAELGEYNMRLLERPQIVVANKMDIPVASENLVEFKKRLA 301 Query: 298 TQCGQVPF-EFSSITGHGIPQILECLHD 324 V E S+ T + I +L + D Sbjct: 302 EDGEDVDIVEISAFTRNNIDNLLYKISD 329 >gi|120599981|ref|YP_964555.1| GTPase ObgE [Shewanella sp. W3-18-1] gi|146292085|ref|YP_001182509.1| GTPase ObgE [Shewanella putrefaciens CN-32] gi|261263085|sp|A4Y427|OBG_SHEPC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263089|sp|A1RMV6|OBG_SHESW RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|120560074|gb|ABM26001.1| GTP1/OBG sub domain protein [Shewanella sp. W3-18-1] gi|145563775|gb|ABP74710.1| GTP1/OBG sub domain protein [Shewanella putrefaciens CN-32] Length = 388 Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 148/341 (43%), Positives = 220/341 (64%), Gaps = 10/341 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG+G +SFRREK++ GGPDGG GG GG V++QA N NTLI+FR Sbjct: 1 MKFVDEAVIRVEAGDGGSGCVSFRREKYVPDGGPDGGDGGDGGSVYLQADENFNTLIEFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ GE G R+ +G G+D++L VPVGT+ + D ++ DL GQ++++A G Sbjct: 61 FERFHMAERGENGRGRDCTGHSGKDLILKVPVGTRAIDHDTEEVLGDLTTHGQKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSTNRAPRQKTLGTPGEVRSLKLELLLLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 RA PK+ADYPFTTL PNLG+V + F++ADIPG+I+ A +GAG+G RFLKH ER + Sbjct: 181 RATPKVADYPFTTLVPNLGVVNPRPGQSFVIADIPGLIEGAAEGAGLGIRFLKHLERCRI 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHI+ + V++A + I+ EL Y+ +L K + ++ D + + L K Sbjct: 241 LLHIIDIEPIDGTDPVESA-RAIVGELEKYSPKLASKPRWLVFNKTDLLLEEELQEKVER 299 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 + + G V + S+ G ++ L D I S+ E+ Sbjct: 300 IVKELEWEGDV-YTISAYNREGTKELALKLLDYIASLPPED 339 >gi|82751242|ref|YP_416983.1| GTPase ObgE [Staphylococcus aureus RF122] gi|123547879|sp|Q2YT86|OBG_STAAB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|82656773|emb|CAI81202.1| Spo0B-associated GTP-binding protein [Staphylococcus aureus RF122] Length = 430 Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 138/330 (41%), Positives = 207/330 (62%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVVFEVDEGSRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE G N G ED+VL VP GT + + ++ DL ++GQR ++A GG Sbjct: 62 RHFKASKGENGQSSNMHGKNAEDLVLKVPPGTIIKNVETDEVLADLVEDGQRAVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSAPDQRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 H++ S E ++ Y+ I EL+AY L + +IV +++D +S D L K E+ Sbjct: 242 HMIDMSGSEGREPIE-DYKVINQELAAYEQRLEDRPQIVVANKMDLPESQDNLILFKEEI 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +P S+IT I Q+L + DK+ Sbjct: 301 GEDVPVIP--VSTITRDNIDQLLYAIADKL 328 >gi|188589146|ref|YP_001919963.1| GTPase ObgE [Clostridium botulinum E3 str. Alaska E43] gi|261266735|sp|B2V0A8|OBG_CLOBA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|188499427|gb|ACD52563.1| GTPase, Obg family [Clostridium botulinum E3 str. Alaska E43] Length = 428 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 142/323 (43%), Positives = 210/323 (65%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AKV+I+SG GG G ISFRREK++ GGP+GG GG GGD+ ++ + + TL+DF+Y+ Sbjct: 2 FIDIAKVFIKSGKGGDGAISFRREKYVPLGGPNGGDGGDGGDIILKVDTGITTLLDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A+ GE G G G+D+++ VP+GT + EE+ +I DL + Q +L GG Sbjct: 62 KKFIAEDGENGGASKCYGRAGKDLIIKVPMGTIIREEESNKVIVDLSHKDQEFVLVKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F + T QAP+YA PG+ G E I L+LKL+AD+G++G PN GKST L+ T+A Sbjct: 122 GGKGNAKFATPTRQAPHYAEPGMPGDELSIVLELKLLADVGLLGFPNVGKSTLLSMTTKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 PKIA+Y FTTL PNLG+V +G + F++ADIPGII+ A +G G+G +FLKH ERT +L+ Sbjct: 182 TPKIANYHFTTLKPNLGVVAVDGIEPFVMADIPGIIEGAAEGVGLGIQFLKHIERTRLLV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 HIV S LE + I +EL Y+ +L + +IV ++ D + D + + Sbjct: 242 HIVDISGLEGREPFEDFVKINEELKKYSVKLWDRPQIVVANKSDLLYDDEVFEEFERKVK 301 Query: 299 QCGQVP-FEFSSITGHGIPQILE 320 + G ++ S+ T G+ ++++ Sbjct: 302 ELGFAKVYKMSAATRDGVDEVIK 324 >gi|251778859|ref|ZP_04821779.1| GTPase, Obg family [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083174|gb|EES49064.1| GTPase, Obg family [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 428 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 142/323 (43%), Positives = 210/323 (65%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AKV+I+SG GG G ISFRREK++ GGP+GG GG GGD+ ++ + + TL+DF+Y+ Sbjct: 2 FIDIAKVFIKSGKGGDGAISFRREKYVPLGGPNGGDGGDGGDIILKVDTGITTLLDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A+ GE G G G+D+++ VP+GT + EE+ +I DL + Q +L GG Sbjct: 62 KKFIAEDGENGGASKCYGRAGKDLIIKVPMGTIIREEESNKVIVDLSHKDQEFVLVKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F + T QAP+YA PG+ G E I L+LKL+AD+G++G PN GKST L+ T+A Sbjct: 122 GGKGNAKFATPTRQAPHYAEPGMPGDELSIVLELKLLADVGLLGFPNVGKSTLLSMTTKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 PKIA+Y FTTL PNLG+V +G + F++ADIPGII+ A +G G+G +FLKH ERT +L+ Sbjct: 182 TPKIANYHFTTLKPNLGVVAVDGIEPFVMADIPGIIEGAAEGVGLGIQFLKHIERTRLLV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 HIV S LE + I +EL Y+ +L + +IV ++ D + D + + Sbjct: 242 HIVDISGLEGREPFEDFVKINEELKKYSVKLWDRPQIVVANKSDLLYDDEVFEEFERKVK 301 Query: 299 QCGQVP-FEFSSITGHGIPQILE 320 + G ++ S+ T G+ ++++ Sbjct: 302 ELGFAKVYKMSAATRDGVDEVIK 324 >gi|223044094|ref|ZP_03614133.1| Obg family GTPase CgtA [Staphylococcus capitis SK14] gi|314933808|ref|ZP_07841173.1| Obg family GTPase CgtA [Staphylococcus caprae C87] gi|222442488|gb|EEE48594.1| Obg family GTPase CgtA [Staphylococcus capitis SK14] gi|313653958|gb|EFS17715.1| Obg family GTPase CgtA [Staphylococcus caprae C87] Length = 430 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 208/333 (62%), Gaps = 7/333 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVVFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE G N G ED+VL VP GT + + ++ DL ++GQR I+A GG Sbjct: 62 RHFKAKKGENGQSSNMHGKNAEDLVLKVPPGTIIKSVETEEVLADLVEDGQRAIVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSENGEPGEELDVTLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDSRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S E + Y+ I EL Y L + +IV +++D D+ D L K E+ Sbjct: 242 HMIDMSGSEGRDPIEDYKIINQELVNYKQRLEDRPQIVVANKMDIPDAKDNLELFKEEVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 VP S+IT I Q+L + DK+ ++ Sbjct: 302 EDITIVP--VSTITRDNIDQLLYLIADKLEEVK 332 >gi|260910268|ref|ZP_05916945.1| GTP-binding protein Obg [Prevotella sp. oral taxon 472 str. F0295] gi|260635772|gb|EEX53785.1| GTP-binding protein Obg [Prevotella sp. oral taxon 472 str. F0295] Length = 388 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 139/322 (43%), Positives = 211/322 (65%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + RR K+ GGPDGG GGRGG+++++ N TL+ +YQ Sbjct: 6 FVDYVKIYCRSGKGGRGSMHLRRVKYNPNGGPDGGDGGRGGNIYLRGNHNYWTLLHLKYQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G + G G+D+ + VP GT V+ + +CD+ +GQ ++L GG Sbjct: 66 RHVFAEHGGNGGRDKCHGTDGKDMYIDVPCGTVVYNAETGKFVCDVMHDGQVVMLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F+++TNQ P YA PG +E I L+LKL+AD+G++G PNAGKST L+S++ A Sbjct: 126 GGLGNFQFRTATNQTPRYAQPGEPMEEMTIILELKLLADVGLVGFPNAGKSTLLSSLSSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+YPFTTL P+LGIV +K F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 RPKIANYPFTTLEPSLGIVAYHDHKSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V ++++ Y+ +L+EL+ +N EL K ++ +++ D +D + + + L T Sbjct: 246 FMVPGDTDDIKKEYEVLLNELNNFNPELNDKHRVLAVTKCDLLDEELMEMLRETLPT--- 302 Query: 302 QVPFEF-SSITGHGIPQILECL 322 +P F SS+TG G+ ++ + L Sbjct: 303 DLPVVFISSVTGLGLSELKDIL 324 >gi|317010584|gb|ADU84331.1| GTPase ObgE [Helicobacter pylori SouthAfrica7] Length = 360 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 142/286 (49%), Positives = 195/286 (68%), Gaps = 5/286 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL +FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLANFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF +D + L DL +R++ GG Sbjct: 62 KHHKAKNGSPGGTRNCAGKKGEDKIIIVPPGTQVFVDDKLWL--DLITPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG++ K EF++ADIPGII+ A +G G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVISVDEKSEFLMADIPGIIEGASEGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 ++ A L+ +++ Y+ + EL ++ L K V L++ D V+ Sbjct: 240 FVLDASRLDLDIKEQYKRLRLELEKFSPTLANKPFGVLLNKCDVVE 285 >gi|282906050|ref|ZP_06313905.1| GTP-binding protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282331342|gb|EFB60856.1| GTP-binding protein [Staphylococcus aureus subsp. aureus Btn1260] Length = 430 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 138/330 (41%), Positives = 207/330 (62%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVVFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE G N G ED+VL VP GT + + ++ DL ++ QR ++A GG Sbjct: 62 RHFKASKGENGQSSNMHGKNAEDLVLKVPPGTIIKNVETDEVLADLVEDCQRAVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDQRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 H++ S E ++ Y+ I EL+AY L + +IV +++D +S D L K E+ Sbjct: 242 HMIDMSGSEGREPIE-DYKVINQELAAYEQRLEDRPQIVVANKMDLPESQDNLILFKEEI 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +P S+IT I Q+L + DK+ Sbjct: 301 GEDVPVIP--VSTITRDNIDQLLYAIADKL 328 >gi|210134501|ref|YP_002300940.1| GTPase ObgE [Helicobacter pylori P12] gi|261266830|sp|B6JKN2|OBG_HELP2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|210132469|gb|ACJ07460.1| GTP-binding protein obgE [Helicobacter pylori P12] Length = 360 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 145/293 (49%), Positives = 196/293 (66%), Gaps = 6/293 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF +D +L DL + +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCTGKKGEDKIIVVPPGTQVFVDD--TLWLDLVEPKKRVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFK +T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKGATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K F++ADIPGII+ A QG G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSGFLMADIPGIIEGASQGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLAR 291 ++ A L+ ++ YQ + EL ++ L K V L++ D V++ D + R Sbjct: 240 FVLDASRLDLGIKEQYQRLRLELEKFSPALANKPFGVLLNKCDVVENIDKMTR 292 >gi|208434249|ref|YP_002265915.1| GTP-binding protein [Helicobacter pylori G27] gi|261266831|sp|B5ZA69|OBG_HELPG RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|208432178|gb|ACI27049.1| GTP-binding protein [Helicobacter pylori G27] Length = 360 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 145/293 (49%), Positives = 197/293 (67%), Gaps = 6/293 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF +D + L DL +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCAGKKGEDKIIVVPPGTQVFADDKLWL--DLITPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K F++ADIPGII+ A +G G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSGFLMADIPGIIEGASEGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLAR 291 ++ A L+ ++ YQ + EL ++ L K V L++ D V++ D +A+ Sbjct: 240 FVLDASRLDLGIKEQYQRLRLELEKFSPALANKPFGVLLNKCDVVENIDEMAK 292 >gi|305680855|ref|ZP_07403662.1| Obg family GTPase CgtA [Corynebacterium matruchotii ATCC 14266] gi|305659060|gb|EFM48560.1| Obg family GTPase CgtA [Corynebacterium matruchotii ATCC 14266] Length = 507 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 144/344 (41%), Positives = 208/344 (60%), Gaps = 23/344 (6%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D+ +++ +GDGG G S REKF GGPDGG+GG GGD+ ++ ++ ++TL+D Y Sbjct: 3 RFVDQVTLHLTAGDGGNGCASIHREKFKPLGGPDGGNGGHGGDIILEVSAQVHTLLDLHY 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H KA+ G G +R+GA+G D+VL VPVGT V E G L DL G R I A GG Sbjct: 63 RPHLKAERGSNGAGDHRNGARGADLVLPVPVGTVVLSESGEQL-ADLTAVGMRFIAARGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA SS +AP +A G G++ + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 FGGLGNAALASSVRKAPGFALRGEPGEQHDVVLELKSVADVGLVGFPSAGKSSLISVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKI DYPFTTL PNLG+V G++ F +AD+PG+I A +G G+G FL+H ERT VL+ Sbjct: 182 AKPKIGDYPFTTLQPNLGVVDVGHETFTIADVPGLIPGASEGKGLGLDFLRHIERTAVLV 241 Query: 242 HIVSALEENVQAAYQCILD------ELSAYNS---------ELRKKIEIVGLSQIDTVDS 286 H+V +++ I D EL+AY S +LR + I+ L++ D D+ Sbjct: 242 HVVDT--ASIEPGRDPISDIEALEAELAAYESILVGDAGLGDLRDRPRIIVLNKADIPDA 299 Query: 287 DTLAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 LA K +L + G F S++ G LE L K+ I Sbjct: 300 AELAEFVKEDLEQKFGWPVFIVSAVARKG----LEPLKYKLLEI 339 >gi|329767398|ref|ZP_08258923.1| GTPase obg [Gemella haemolysans M341] gi|328836087|gb|EGF85778.1| GTPase obg [Gemella haemolysans M341] Length = 434 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 140/328 (42%), Positives = 209/328 (63%), Gaps = 6/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLDE K+++RSGDGG G ++FRREK++ GGP GG GGRG +V L T +D+RYQ Sbjct: 2 FLDEVKIFVRSGDGGNGLVAFRREKYVPKGGPAGGDGGRGANVVFIVDEGLRTFMDYRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A +GE GM + G K +D+ L VP GT + + D ++ DL + Q +++A GG Sbjct: 62 KKFVAPNGENGMSKGMHGRKSKDLYLKVPPGTVIRDTDTGEVLADLVEHEQEVVVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + +N AP A G G+E+ + L+LKL+AD+G++G P+ GKST L+ ++A Sbjct: 122 GGRGNCRFATPSNPAPEIAENGEPGEERNLTLELKLMADVGLVGFPSVGKSTLLSITSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+V+ + ++ F++AD+PG+I+ A QG G+G +FL+H ERT V++ Sbjct: 182 KPKIADYHFTTLVPNLGVVETKDHRSFVMADLPGLIEGASQGVGLGHQFLRHIERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT-VDSDTLARKKNELA 297 H+V SA + + Y+ I EL+ YN L ++ ++V +++D V S+ L K +L Sbjct: 242 HVVDMSATDGRDPYEDYKIINQELAEYNMRLLERPQVVVANKMDIPVASENLKEFKKQLE 301 Query: 298 TQCGQVPF-EFSSITGHGIPQILECLHD 324 V E S+ T I +L + D Sbjct: 302 NDGEDVDIVEISAFTRSNIDNLLYKISD 329 >gi|328945900|gb|EGG40050.1| Spo0B-associated GTP-binding protein [Streptococcus sanguinis SK1087] Length = 436 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 144/329 (43%), Positives = 211/329 (64%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIQVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + +G ED+++ VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKAQSGEKGMTKGMNGRGAEDLIVRVPQGTTVRDAETGKVLTDLVENGQEFIVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELLLELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTHSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D DS + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPDSAENLKVFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+T G+ +L+ Sbjct: 304 ANYDEFAELPQIFPISSLTKQGLATLLDA 332 >gi|302325968|gb|ADL25169.1| GTP-binding protein Obg/CgtA [Fibrobacter succinogenes subsp. succinogenes S85] Length = 333 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 133/320 (41%), Positives = 196/320 (61%), Gaps = 6/320 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLDE + +RSG GG G SF REKF+ GGPDGG GGRGG V +Q TL+D Sbjct: 2 FLDEKNIEVRSGRGGDGICSFHREKFVPLGGPDGGDGGRGGHVILQVNERYTTLLDMGNT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +KA+ G+ G + SGA ED++++VP GT V +E G ++ DL + GQ+ I A GG Sbjct: 62 HIYKAKSGQPGGAKRCSGASAEDLIISVPRGTIVKDEQG-HILTDLTEPGQKWIAARGGK 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + QAP PG G+ + ++L+LKL+AD+G++G PNAGKS+ + ++ Sbjct: 121 GGMGNQHFATPKVQAPRKCTPGEKGEVRQLFLELKLMADVGLVGFPNAGKSSLVNKISSG 180 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PK+ DYPFTTL P LGIV+ F++ADIPG+++ A +G G+G +FLKH ERTH LL Sbjct: 181 RPKVGDYPFTTLEPVLGIVQVNGHSFVVADIPGLLEGASEGKGLGHQFLKHIERTHTLLF 240 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQ 302 ++ EN ++ + +EL A++ +L +K +V L++ D + + K Q Sbjct: 241 VIDGFAENAYEQFKVLKEELKAFHPKLAEKNFVVALNKSDLGIENAIKEFKKHR-----Q 295 Query: 303 VPFEFSSITGHGIPQILECL 322 S++TG G ++ + L Sbjct: 296 KVVITSAVTGEGCAELQQAL 315 >gi|315123698|ref|YP_004065702.1| GTP-binding protein, GTP1/Obg family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017420|gb|ADT65513.1| GTP-binding protein, GTP1/Obg family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 345 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 143/341 (41%), Positives = 218/341 (63%), Gaps = 13/341 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ + SGDGG G +SFRREK + GGPDGG GG GGD+ +N +TL++F+ + Sbjct: 2 FIDSVKITLASGDGGKGTVSFRREKHVPLGGPDGGDGGNGGDIIFVCDNNTHTLVNFKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +AQ+G GM RN++G KGE++ L VP GTQV + ++ DL +EGQ+ + GG Sbjct: 62 RELRAQNGAGGMGRNKNGKKGENLELIVPEGTQVIDAQTNEILLDLTKEGQKELFLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK +TNQ P YA PGI G+ +++ L+LKLIAD+G++G PN GKST ++ V+ A Sbjct: 122 GGLGNTHFKHATNQRPDYAQPGIKGESRLVRLELKLIADVGLVGFPNVGKSTLISVVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+V + Y F++ADIPGII+ A G G+G FLKH ERT LL Sbjct: 182 KPEIANYEFTTLTPKLGLVDVDEYNSFVMADIPGIIEGASGGKGLGLAFLKHIERTSFLL 241 Query: 242 HIVSALEE-NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-----SDTLARKKNE 295 ++ + E +++ + + EL +++EL + + +S+ D+V+ ++ + NE Sbjct: 242 FVLDPMREMHLKEQFIVLRKELEKFSNELFGRKFGIMISKSDSVNLGEEFAEQITLNINE 301 Query: 296 LATQCGQV--PFEF----SSITGHGIPQILECLHDKIFSIR 330 L ++ P F SS+ G+ ++ L ++I ++R Sbjct: 302 LENYLKEINNPQSFLIKVSSLEKTGLKELKFMLLEEIKTLR 342 >gi|261414758|ref|YP_003248441.1| GTP-binding protein Obg/CgtA [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371214|gb|ACX73959.1| GTP-binding protein Obg/CgtA [Fibrobacter succinogenes subsp. succinogenes S85] Length = 333 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 133/320 (41%), Positives = 196/320 (61%), Gaps = 6/320 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLDE + +RSG GG G SF REKF+ GGPDGG GGRGG V +Q TL+D Sbjct: 2 FLDEKNIEVRSGRGGDGICSFHREKFVPLGGPDGGDGGRGGHVILQVNEQYTTLLDMGNT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +KA+ G+ G + SGA ED++++VP GT V +E G ++ DL + GQ+ I A GG Sbjct: 62 HIYKAKSGQPGGAKRCSGASAEDLIISVPRGTIVKDEQG-HILTDLTEPGQKWIAARGGK 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + QAP PG G+ + ++L+LKL+AD+G++G PNAGKS+ + ++ Sbjct: 121 GGMGNQHFATPKVQAPRKCTPGEKGEVRQLFLELKLMADVGLVGFPNAGKSSLVNKISSG 180 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PK+ DYPFTTL P LGIV+ F++ADIPG+++ A +G G+G +FLKH ERTH LL Sbjct: 181 RPKVGDYPFTTLEPVLGIVQVNGHSFVVADIPGLLEGASEGKGLGHQFLKHIERTHTLLF 240 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQ 302 ++ EN ++ + +EL A++ +L +K +V L++ D + + K Q Sbjct: 241 VIDGFAENAYEQFKVLKEELKAFHPKLAEKNFVVALNKSDLGIENAIKEFKKHR-----Q 295 Query: 303 VPFEFSSITGHGIPQILECL 322 S++TG G ++ + L Sbjct: 296 KVVITSAVTGEGCAELQQAL 315 >gi|157414409|ref|YP_001481665.1| GTPase ObgE [Campylobacter jejuni subsp. jejuni 81116] gi|261266712|sp|A8FJQ1|OBG_CAMJ8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|157385373|gb|ABV51688.1| GTP-binding protein, GTP1/Obg family [Campylobacter jejuni subsp. jejuni 81116] gi|307747053|gb|ADN90323.1| GTP-binding protein Obg [Campylobacter jejuni subsp. jejuni M1] gi|315931490|gb|EFV10457.1| GTP-binding protein Obg/CgtA [Campylobacter jejuni subsp. jejuni 327] Length = 345 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 143/341 (41%), Positives = 217/341 (63%), Gaps = 13/341 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ + SGDGG G +SFRREK + GGPDGG GG GGD+ +N +TL++F+ + Sbjct: 2 FIDSVKITLASGDGGKGAVSFRREKHVPLGGPDGGDGGNGGDIIFVCDNNTHTLVNFKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +AQ+G GM RN++G KGE++ L VP GTQV + ++ DL +EGQR + GG Sbjct: 62 RELRAQNGAGGMGRNKNGKKGENLELIVPEGTQVIDAQTNEILLDLTKEGQRELFLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK +TNQ P YA PGI G+ +++ L+LKLIAD+G++G PN GKST ++ V+ A Sbjct: 122 GGLGNTHFKHATNQRPDYAQPGIKGESRLVRLELKLIADVGLVGFPNVGKSTLISVVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+V + Y F++ADIPGII+ A G G+G FLKH ERT LL Sbjct: 182 KPEIANYEFTTLTPKLGLVDVDEYNSFVMADIPGIIEGASGGKGLGLAFLKHIERTSFLL 241 Query: 242 HIVSALEEN-VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-----SDTLARKKNE 295 ++ + + ++ + + EL +++EL + + +S+ D+V+ ++ + NE Sbjct: 242 FVLDPMRQMPLKEQFIVLRKELEKFSNELFGRKFGIMISKSDSVNLGEEFAEQITLNINE 301 Query: 296 LATQCGQV--PFEF----SSITGHGIPQILECLHDKIFSIR 330 L ++ P F SS+ G+ ++ L ++I ++R Sbjct: 302 LENYLKEINNPQSFLIKVSSLEKTGLKELKFMLLEEIKTLR 342 >gi|317500385|ref|ZP_07958609.1| obg family GTPase CgtA [Lachnospiraceae bacterium 8_1_57FAA] gi|316898140|gb|EFV20187.1| obg family GTPase CgtA [Lachnospiraceae bacterium 8_1_57FAA] Length = 451 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 149/325 (45%), Positives = 207/325 (63%), Gaps = 10/325 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+YIRSG GG G SFRRE ++ GGPDGG GGRGGD+ LNTL+D+R++ Sbjct: 26 FADRAKIYIRSGKGGDGHCSFRRELYVPNGGPDGGDGGRGGDLIFAIDEGLNTLVDYRHK 85 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A GE G KR G G+D++L VP GT + E +I D+ + +R ++ GG Sbjct: 86 RKYAAGDGEPGGKRRCHGKDGKDLILYVPEGTVIKEAVTGKVIADMSGDNRRQVVLKGGK 145 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST Q P YA PG +E + L+LK+IAD+G+IG PN GKST L+ VT A Sbjct: 146 GGLGNQHFATSTMQVPKYAQPGQPARELEVKLELKVIADVGLIGFPNVGKSTLLSRVTNA 205 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V EG K F++ADIPG+I+ A +G G+G FL+H ERT +++ Sbjct: 206 EPKIANYHFTTLSPNLGVVDLEGAKGFVMADIPGLIEGASEGIGLGHEFLRHIERTKLMI 265 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKN 294 H+V A + + Y+ I EL AYN E+ K+ +++ ++ D + D D R K Sbjct: 266 HVVDAAGTEGRDPIDDIYK-INAELEAYNPEIAKRPQVIAANKTDLIFEADEDPTERLKK 324 Query: 295 ELATQCGQVPFEFSSITGHGIPQIL 319 E + +V F S +TG GI ++L Sbjct: 325 EFEPKGIKV-FPISGVTGKGISELL 348 >gi|242242916|ref|ZP_04797361.1| spo0B-associated GTP-binding protein [Staphylococcus epidermidis W23144] gi|242233631|gb|EES35943.1| spo0B-associated GTP-binding protein [Staphylococcus epidermidis W23144] Length = 430 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 139/333 (41%), Positives = 209/333 (62%), Gaps = 7/333 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVIFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE G N G ED+VL VP GT + + ++ DL ++GQR I+A GG Sbjct: 62 RHFKAKKGENGQSSNMHGKNAEDLVLKVPPGTIIKSVESEEVLADLVEDGQRAIVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSENGEPGEELEVTLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V ++ F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDHRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKKNELA 297 H++ S E + Y+ I EL Y L + +I+ +++D DS L+ K +L Sbjct: 242 HMIDMSGSEGRDPLDDYKIINQELINYKQRLEDRPQIIVANKMDLPDSQGNLSLFKEQLD 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 VP S+IT I Q+L + DK+ ++ Sbjct: 302 NDVTVVP--VSTITRDNIDQLLYQIADKLEEVK 332 >gi|304385119|ref|ZP_07367465.1| obg family GTPase CgtA [Pediococcus acidilactici DSM 20284] gi|304329313|gb|EFL96533.1| obg family GTPase CgtA [Pediococcus acidilactici DSM 20284] Length = 431 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 144/334 (43%), Positives = 213/334 (63%), Gaps = 8/334 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ I++G+GG G ++FRREK++ GGP GG GGRGGDV ++ L TL+DFRY+ Sbjct: 2 FVDQVKINIKAGNGGNGIVAFRREKYVPNGGPAGGDGGRGGDVILKVDPGLRTLMDFRYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 FKA+ G+ GM + +G ED+V+ VP GT V + +I DL + GQ +++A GG Sbjct: 62 HKFKAESGKNGMNKQMTGRSAEDLVIMVPGGTIVRDLTTGRVIGDLTENGQELVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + N AP A G G+E + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 122 GGRGNMHFANPRNPAPEIAENGEPGEELELQLELKVLADVGLLGFPSVGKSTLLSVVTSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V+ + ++F++ADIPG+I+ A QG G+G FL+H ERT VLL Sbjct: 182 KPKIAEYHFTTLVPNLGMVQLDDGRDFVIADIPGLIEGASQGVGLGFEFLRHVERTRVLL 241 Query: 242 HIVSA---LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKKNELA 297 H+V E + ++ I EL YN +L K+ +I+ +++D +D LA + ++ Sbjct: 242 HLVDMSGLTEADPFTNFEQINAELEKYNPDLIKRRQIIVPTKMDLPGADEQLAEFEKKVR 301 Query: 298 TQCGQVPFE---FSSITGHGIPQILECLHDKIFS 328 FE SSIT G+ +++ D + S Sbjct: 302 ADERYRDFEIFPISSITHEGLSKLISRTADVLES 335 >gi|307720686|ref|YP_003891826.1| GTP-binding protein Obg/CgtA [Sulfurimonas autotrophica DSM 16294] gi|306978779|gb|ADN08814.1| GTP-binding protein Obg/CgtA [Sulfurimonas autotrophica DSM 16294] Length = 366 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 129/304 (42%), Positives = 194/304 (63%), Gaps = 2/304 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D ++ + SG GG G ++FRREKF+ GGP+GG GG+GGDVW + +N +TL F+ + Sbjct: 2 FTDSVELTVSSGKGGQGCVAFRREKFVLNGGPNGGDGGKGGDVWFKCDNNTHTLSHFQRR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA++G+ G N +G G V+ VP GTQ+ +++ ++ D+ ++GQ GG Sbjct: 62 MHIKAENGKPGEGSNCTGKSGAKKVIIVPPGTQIIDQESGEVLFDMLKDGQEEKFLQGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKS TNQ P YA PG G+ K I L LKLIADIG++G PN GKST +++V+ A Sbjct: 122 GGLGNTHFKSPTNQRPTYAQPGEKGETKNIKLDLKLIADIGLVGFPNVGKSTLISTVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IA+Y FTTL P LG V G Y+ F++ADIPGII AH+G G+G FL+H ERT +LL Sbjct: 182 RPEIANYEFTTLTPKLGQVNIGDYESFVMADIPGIIGGAHEGKGLGIEFLRHIERTKILL 241 Query: 242 HIVS-ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 ++ A +++ + + +E+++++ +L + L++ D V + ++ K E + Sbjct: 242 FMIDLASYRDLKEQIETLKNEVASFSEKLGASRYAIALTRTDIVPQEEISEKVAEFISML 301 Query: 301 GQVP 304 P Sbjct: 302 DLNP 305 >gi|86154076|ref|ZP_01072277.1| GTP-binding protein Obg/CgtA [Campylobacter jejuni subsp. jejuni HB93-13] gi|121613578|ref|YP_999820.1| GTPase ObgE [Campylobacter jejuni subsp. jejuni 81-176] gi|167004794|ref|ZP_02270552.1| GTPase ObgE [Campylobacter jejuni subsp. jejuni 81-176] gi|261266714|sp|A1VXH9|OBG_CAMJJ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|85842490|gb|EAQ59704.1| GTP-binding protein Obg/CgtA [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249006|gb|EAQ71968.1| GTP-binding protein, GTP1/Obg family [Campylobacter jejuni subsp. jejuni 81-176] Length = 356 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 144/341 (42%), Positives = 216/341 (63%), Gaps = 13/341 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ + SGDGG G +SFRREK + GGPDGG GG GGD+ +N +TL++F+ + Sbjct: 2 FIDSVKITLASGDGGKGAVSFRREKHVPLGGPDGGDGGNGGDIIFVCDNNTHTLVNFKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +AQ+G GM RN++G KGE++ L VP GTQV + ++ DL +EGQR + GG Sbjct: 62 RELRAQNGAGGMGRNKNGKKGENLELIVPEGTQVIDAQTNEILLDLTEEGQRELFLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK +TNQ P YA PGI G+ +++ L+LKLIAD+G++G PN GKST ++ V+ A Sbjct: 122 GGLGNTHFKHATNQRPDYAQPGIKGESRLVRLELKLIADVGLVGFPNVGKSTLISVVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+V Y F++ADIPGII+ A G G+G FLKH ERT LL Sbjct: 182 KPEIANYEFTTLTPKLGLVDVNEYNSFVMADIPGIIEGASGGKGLGLAFLKHIERTSFLL 241 Query: 242 HIVSALEEN-VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-----SDTLARKKNE 295 ++ + + ++ + + EL +++EL + + +S+ D+V ++ +A NE Sbjct: 242 FVLDPMRQMPLKEQFIVLRKELEKFSNELFGRKFGIMISKSDSVRLGEEFAEQIALNINE 301 Query: 296 LATQCGQV--PFEF----SSITGHGIPQILECLHDKIFSIR 330 L ++ P F SS+ G+ ++ L ++I ++R Sbjct: 302 LDNYLKEINNPQSFLIKVSSLEKTGLKELKFMLLEEIKTLR 342 >gi|72162579|ref|YP_290236.1| GTPase ObgE [Thermobifida fusca YX] gi|123629050|sp|Q47MV6|OBG_THEFY RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|71916311|gb|AAZ56213.1| putative GTP-binding protein [Thermobifida fusca YX] Length = 454 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 134/332 (40%), Positives = 206/332 (62%), Gaps = 9/332 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DEA +++++GDGG G +S REKF GGPDGG+GG GGDV ++ N TL++++ + Sbjct: 4 FVDEAVLHLKAGDGGHGCVSIHREKFKPLGGPDGGNGGHGGDVILEVDRNTATLLEYQRR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA++G G NRSGA G D+VL VP GT V DG +I DL G R+++A GG Sbjct: 64 PHRKAENGAPGQGSNRSGASGADLVLPVPDGTVVTTLDG-EVIADLVGHGTRLVVARGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S +AP +A G G++ I L+LK IAD+G++G P+AGKS+ +A+++ A Sbjct: 123 GGLGNAALASPKRKAPGFALKGEPGEKVDIRLELKTIADVGLVGFPSAGKSSLIAAMSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G ++++AD+PG+I A +G G+G FL+H ER LLH Sbjct: 183 RPKIADYPFTTLVPNLGVVEAGQTQYVVADVPGLIPGASEGKGLGLEFLRHVERCSTLLH 242 Query: 243 IVSALE----ENVQAAYQCILDELSAYNS----ELRKKIEIVGLSQIDTVDSDTLARKKN 294 ++ + + + + EL+ Y +L + +V L++ID ++ LA Sbjct: 243 VLDCATYEPGRDPISDLEAVERELAVYGERTGVDLSDRPRLVALNKIDVPEARELAELVE 302 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + + G + S+ T G+ ++ L +++ Sbjct: 303 PMLVERGYRVLQVSAATREGLKELAYALGEQV 334 >gi|15835314|ref|NP_297073.1| GTPase ObgE [Chlamydia muridarum Nigg] gi|270285486|ref|ZP_06194880.1| GTPase ObgE [Chlamydia muridarum Nigg] gi|270289498|ref|ZP_06195800.1| GTPase ObgE [Chlamydia muridarum Weiss] gi|301336883|ref|ZP_07225085.1| GTPase ObgE [Chlamydia muridarum MopnTet14] gi|81858502|sp|Q9PJX7|OBG_CHLMU RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|8163297|gb|AAF73594.1| GTP-binding protein, GTP1/Obg family [Chlamydia muridarum Nigg] Length = 335 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 139/333 (41%), Positives = 212/333 (63%), Gaps = 18/333 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ + +R+G GG G +++R+EK++ GGP GG+GG GG + I+A +N+ + ++R Sbjct: 2 FVDQITLELRAGKGGNGVVAWRKEKYLPKGGPYGGNGGNGGSILIEAVTNMYSFEEYRNL 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KA G+ G NR+G G+D VL VP GT + + + LI D ++G+RI++ GG Sbjct: 62 RFLKAGDGQAGASNNRTGKNGKDFVLKVPEGTLLRDAETGELIHDFTKDGERIVVCQGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK+STN+AP A PG G+ +++ L+LKLIADIG++G PNAGKST ++ R Sbjct: 122 GGKGNVFFKTSTNRAPTKATPGKPGEIRLVELELKLIADIGLVGFPNAGKSTLFNTLART 181 Query: 183 KPKIADYPFTTLYPNLGIV-KEGY---KEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 + K+ YPFTTL+P+LG+V +EGY K +I+ADIPGII+ A Q G+G FL+H ERT Sbjct: 182 EVKVGAYPFTTLHPSLGLVHQEGYLYQKPWIMADIPGIIEGASQNRGLGLDFLRHIERTR 241 Query: 239 VLLHIV--SALEENV-QAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 +LL +V S +E + + Q ++ EL AY +L+ K ++ L++ID + D ++ Sbjct: 242 LLLFVVDISGIERSSPEKDLQILIGELLAYKEDLKNKSMVIALNKIDQLLPD---EREER 298 Query: 296 LATQCGQVPFE----FSSITGHGIPQILECLHD 324 LA Q P + S +TG G+ + LHD Sbjct: 299 LALLKQQFPDQEFILLSGLTGEGV----DVLHD 327 >gi|172058114|ref|YP_001814574.1| GTP-binding protein Obg/CgtA [Exiguobacterium sibiricum 255-15] gi|261266788|sp|B1YJR9|OBG_EXIS2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|171990635|gb|ACB61557.1| GTP-binding protein Obg/CgtA [Exiguobacterium sibiricum 255-15] Length = 431 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 126/289 (43%), Positives = 196/289 (67%), Gaps = 4/289 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ +Y+++GDGG G ++FRREK++ GGP GG GG G V ++ L TL+DFRY+ Sbjct: 2 FVDQVNIYVKAGDGGRGQVAFRREKYVPDGGPAGGDGGHGAHVVLEVDEGLRTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM + G K E +V+ VP GT V+++D ++I DL GQ+ I+A GG Sbjct: 62 RHFKAVQGENGMSKGMHGRKAEHLVVKVPPGTVVYDDDTDAVIADLVHHGQQAIVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP +A G G+EK + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATPANPAPEHAENGEPGEEKYLKLELKMLADVGLVGFPSVGKSTMLSIVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTT+ PN+G+V+ E + F++AD+PG+I+ A +G G+G +FL+H ERT V++ Sbjct: 182 RPKIGAYHFTTITPNIGVVETEDSRSFVMADLPGLIEGASEGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 H++ S +E + Y I EL+ YN L ++ ++V +++D D++ Sbjct: 242 HVIDMSGMEGRDPIDDYNIINKELADYNLRLTERPQVVVANKMDMPDAE 290 >gi|256827038|ref|YP_003150997.1| GTP-binding protein Obg/CgtA [Cryptobacterium curtum DSM 15641] gi|256583181|gb|ACU94315.1| GTP-binding protein Obg/CgtA [Cryptobacterium curtum DSM 15641] Length = 464 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 131/299 (43%), Positives = 192/299 (64%), Gaps = 10/299 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ ++++ GDGGAG +SFRRE + GGPDGG GG GG++ IQA ++++LID+R++ Sbjct: 2 FIDKVHIHVKGGDGGAGCMSFRREAHVPKGGPDGGDGGHGGNIVIQADGSVSSLIDYRFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVF-----EEDGISLICDLDQEGQRIIL 117 HFKA+ G G GA G D +L VPVGT V + + I DL +G +++ Sbjct: 62 HHFKAERGVHGKGSRMHGADGADCILRVPVGTVVRAWNEEKSEAGETIADLTHDGDAVVV 121 Query: 118 APGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 A GG GG GN HF +ST +AP +A G E I L++KL+AD ++G+P+AGKS+ +A Sbjct: 122 AQGGAGGRGNIHFVTSTRRAPAFAELGEPASEHWIELEMKLMADAALVGMPSAGKSSLIA 181 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 ++ AKPKIADYPFTTL PNLG+V+ ++++AD+PG+I+ AH+G G+G FL+H ER Sbjct: 182 RMSAAKPKIADYPFTTLAPNLGVVRSDDYDYVIADVPGLIEGAHEGRGLGHEFLRHVERC 241 Query: 238 HVLLHIVS---ALEENVQAAYQCILD-ELSAYNSELRKKIEIVGLSQIDTVD-SDTLAR 291 +++H+V E CI++ EL Y SEL + IV +++D D LAR Sbjct: 242 ALIVHVVDITGGFEGRDPVEDYCIINQELKLYASELANRPCIVVANKVDVPGFEDNLAR 300 >gi|270291407|ref|ZP_06197629.1| GTPase ObgE [Pediococcus acidilactici 7_4] gi|270280253|gb|EFA26089.1| GTPase ObgE [Pediococcus acidilactici 7_4] Length = 431 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 144/334 (43%), Positives = 213/334 (63%), Gaps = 8/334 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ I++G+GG G ++FRREK++ GGP GG GGRGGDV ++ L TL+DFRY+ Sbjct: 2 FVDQVKINIKAGNGGNGIVAFRREKYVPNGGPAGGDGGRGGDVILKVDPGLRTLMDFRYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 FKA+ G+ GM + +G ED+V+ VP GT V + +I DL + GQ +++A GG Sbjct: 62 HKFKAESGKNGMNKQMTGRSAEDLVIMVPGGTIVRDLTTGRVIGDLTENGQELVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + N AP A G G+E + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 122 GGRGNMHFANPRNPAPEIAENGEPGEELELQLELKVLADVGLLGFPSVGKSTLLSVVTSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V+ + ++F++ADIPG+I+ A QG G+G FL+H ERT VLL Sbjct: 182 KPKIAEYHFTTLVPNLGMVQLDDGRDFVIADIPGLIEGASQGVGLGFEFLRHVERTRVLL 241 Query: 242 HIVSA---LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKKNELA 297 H+V E + ++ I EL YN +L K+ +I+ +++D +D LA + ++ Sbjct: 242 HLVDMSGLTEADPFTNFEQINAELEKYNPDLIKRRQIIVPTKMDLPGADEQLAEFEKKVR 301 Query: 298 TQCGQVPFE---FSSITGHGIPQILECLHDKIFS 328 FE SSIT G+ +++ D + S Sbjct: 302 ADERYRDFEIFPISSITHEGLSKLISRTADVLES 335 >gi|229019665|ref|ZP_04176473.1| Spo0B-associated GTP-binding protein [Bacillus cereus AH1273] gi|229025902|ref|ZP_04182297.1| Spo0B-associated GTP-binding protein [Bacillus cereus AH1272] gi|228735405|gb|EEL86005.1| Spo0B-associated GTP-binding protein [Bacillus cereus AH1272] gi|228741628|gb|EEL91820.1| Spo0B-associated GTP-binding protein [Bacillus cereus AH1273] Length = 427 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 136/322 (42%), Positives = 206/322 (63%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ GDGG G +++RREK++ GGP GG GG+G DV L TL+DFRYQ Sbjct: 2 FVDQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFVVEEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA G+ GM + + G K ED+++ VP GT V +E ++ DL Q ++A GG Sbjct: 62 RHFKADRGQHGMSKGQHGRKSEDLIVKVPPGTIVKDEKTGEILADLVTHEQTAVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + TN AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATPTNPAPEIAENGEPGQERDVTLELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTT+ PNLG+V+ G + F++AD+PG+I+ AH G G+G +FL+H ERT V++ Sbjct: 182 RPKIAEYHFTTIVPNLGVVETGDNRSFVMADLPGLIEGAHAGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S LE Y I EL YN L ++ ++V +++D + + L K +L Sbjct: 242 HVIDMSGLEGREPYEDYVTINSELKEYNMRLTERPQVVVANKMDMPGAEENLQAFKEKLG 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + P S++T G+ +L Sbjct: 302 DEVKIFP--VSAVTKQGVRDLL 321 >gi|163846858|ref|YP_001634902.1| GTP-binding protein Obg/CgtA [Chloroflexus aurantiacus J-10-fl] gi|222524679|ref|YP_002569150.1| GTP-binding protein Obg/CgtA [Chloroflexus sp. Y-400-fl] gi|261266720|sp|A9WK62|OBG_CHLAA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266726|sp|B9LC30|OBG_CHLSY RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|163668147|gb|ABY34513.1| GTP-binding protein Obg/CgtA [Chloroflexus aurantiacus J-10-fl] gi|222448558|gb|ACM52824.1| GTP-binding protein Obg/CgtA [Chloroflexus sp. Y-400-fl] Length = 439 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 147/327 (44%), Positives = 206/327 (62%), Gaps = 6/327 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+A + +R+G+GG G +FRREK++ GGP+GG GGRGG V++ A NTL+ FRYQ Sbjct: 7 FFDQATIVVRAGNGGNGAATFRREKYVPRGGPNGGDGGRGGHVYLIADPEYNTLLHFRYQ 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEE-DGISLICDLDQEGQRIILAPGG 121 + F A++G G K G G DV + VP GT V DG++ DL + GQR++ A GG Sbjct: 67 RKFVAENGGHGGKNAMHGRNGTDVYVPVPPGTVVRATIDGVTYSVDLARPGQRLLAARGG 126 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN HF +ST QAP A G GQE + L+LK++AD+G++G PNAGKST L+ ++ Sbjct: 127 RGGLGNIHFATSTRQAPRLAELGEPGQELTLELELKMLADVGLVGFPNAGKSTLLSVISA 186 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A+PKIA YPFTTL PNLGIV+ G + F++ADIPG+I+ AH G G+G FL+H ERT +L+ Sbjct: 187 ARPKIAAYPFTTLTPNLGIVEVGLQRFVVADIPGLIEGAHAGVGLGHDFLRHVERTRLLI 246 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQID-TVDSDTLARKKNELA 297 HI+ A + + Y+ I EL Y EL ++ ++V L++ D + L + L Sbjct: 247 HIIDAAGVDGRYPWDDYEQINTELRLYQPELAQRKQVVALNKADLPAAQENLPILRERLP 306 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHD 324 + F S+ TG GI +L + D Sbjct: 307 VAPEDL-FVISAATGEGIEPLLRRVAD 332 >gi|323489993|ref|ZP_08095214.1| GTPase CgtA [Planococcus donghaensis MPA1U2] gi|323396289|gb|EGA89114.1| GTPase CgtA [Planococcus donghaensis MPA1U2] Length = 429 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 141/341 (41%), Positives = 215/341 (63%), Gaps = 10/341 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D KVY++ GDGG G ++FRREK++ GGP GG GG+GG++ L TL+DFRY+ Sbjct: 2 FVDHVKVYVKGGDGGDGMVAFRREKYVPNGGPAGGDGGKGGNIVFIVEEGLRTLMDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ G GM +N+ GAK ED ++ VP GT V + I DL + GQ I+A GG Sbjct: 62 RIFKAERGTHGMSKNQHGAKAEDTLIKVPPGTVVKDVGTGETIADLVEHGQTAIIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP + G G E+ + L+LK++AD G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATPANPAPELSEKGEPGYERNVILELKVLADAGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTT+ PNLG+V+ E + F++AD+PG+I+ AH+G G+G +FL+H ERT V++ Sbjct: 182 KPKIAEYHFTTIVPNLGMVETEDQRSFVMADLPGLIQGAHEGIGLGHQFLRHIERTRVII 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ S LE + Y I +EL YN L ++ +++ +++D DS+ K E Sbjct: 242 HVIDMSGLEGRDPYEDYLTINEELKQYNMRLTERPQLIVANKMDMPDSEENLAKFREKLP 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKI-----FSIRGENE 334 + ++ F S+++ G+ +L + D I F + G+ E Sbjct: 302 EDARI-FPISALSRKGLNNLLFAIADVIEVTPEFPLMGDEE 341 >gi|303237832|ref|ZP_07324389.1| Obg family GTPase CgtA [Prevotella disiens FB035-09AN] gi|302481978|gb|EFL45016.1| Obg family GTPase CgtA [Prevotella disiens FB035-09AN] Length = 390 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 140/322 (43%), Positives = 208/322 (64%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + R K+ GGPDGG GG+GG + ++ N TL+ RYQ Sbjct: 6 FVDYVKIYCRSGKGGRGSMHLRHVKYNPNGGPDGGDGGKGGSIILRGNHNYWTLLHLRYQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G + G+ G++V + VP GT V+ + +CD+ +GQ ++L GG Sbjct: 66 RHIFAEHGGNGGRDKCHGSDGKNVYIDVPCGTVVYNAETGKFVCDISYDGQEVVLLKGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F+++TNQAP YA PG QE I L+LKL+AD+G++G PNAGKST L+S++ A Sbjct: 126 GGLGNFQFRTATNQAPRYAQPGQPLQEMTIILELKLLADVGLVGFPNAGKSTLLSSLSSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTT+ P+LGIV + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 KPKIANYPFTTMEPSLGIVSYRDSQSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + K L T Sbjct: 246 FMVPGDTDDIKKEYEILLNELHQFNPEMTDKHRVLAVTKSDLLDDELIEMLKETLPT--- 302 Query: 302 QVPFEF-SSITGHGIPQILECL 322 +P F SS+TG GI ++ + L Sbjct: 303 DLPVVFISSVTGMGIDELKDIL 324 >gi|91794275|ref|YP_563926.1| GTPase ObgE [Shewanella denitrificans OS217] gi|123356532|sp|Q12K23|OBG_SHEDO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|91716277|gb|ABE56203.1| GTP1/OBG subdomain [Shewanella denitrificans OS217] Length = 388 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 139/303 (45%), Positives = 204/303 (67%), Gaps = 4/303 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG+G +SFRREK++ GGPDGG GG GG V++QA N NTLID+R Sbjct: 1 MKFIDEASIRVEAGDGGSGCVSFRREKYVPDGGPDGGDGGDGGSVFLQADENYNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ G G R+ +G G D++L VPVGT+ +++ LI DL GQ++++A G Sbjct: 61 FERFHMAERGSNGRGRDCTGHGGVDLILKVPVGTRAVDDETQELIGDLTAHGQKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSTNRAPRQKTLGTPGEVRSLRLELLLLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 RA PK+ADYPFTTL PNLG+V + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 RATPKVADYPFTTLVPNLGVVNPRPGQSFVIADIPGLIEGASDGAGLGIRFLKHLERCRV 240 Query: 240 LLHI--VSALEENVQA-AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 LLHI + ++ + A A + I+ EL Y+ +L K + ++ D + + L + + + Sbjct: 241 LLHILDIDPIDGSSPAEAAKAIVAELEKYSPKLAAKPRWLVFNKTDLMLEEDLQERVDAI 300 Query: 297 ATQ 299 + Sbjct: 301 VAE 303 >gi|86149514|ref|ZP_01067744.1| GTP-binding protein, GTP1/Obg family [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597715|ref|ZP_01100948.1| GTP-binding protein, GTP1/Obg family [Campylobacter jejuni subsp. jejuni 84-25] gi|218561777|ref|YP_002343556.1| GTPase ObgE [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|123043077|sp|Q0PC41|OBG_CAMJE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|85839782|gb|EAQ57041.1| GTP-binding protein, GTP1/Obg family [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190019|gb|EAQ93995.1| GTP-binding protein, GTP1/Obg family [Campylobacter jejuni subsp. jejuni 84-25] gi|112359483|emb|CAL34267.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925389|gb|ADC27741.1| GTPase ObgE [Campylobacter jejuni subsp. jejuni IA3902] gi|315926967|gb|EFV06329.1| GTP-binding protein Obg/CgtA [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315928852|gb|EFV08115.1| GTP-binding protein Obg/CgtA [Campylobacter jejuni subsp. jejuni 305] Length = 350 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 144/341 (42%), Positives = 216/341 (63%), Gaps = 13/341 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ + SGDGG G +SFRREK + GGPDGG GG GGD+ +N +TL++F+ + Sbjct: 2 FIDSVKITLASGDGGKGAVSFRREKHVPLGGPDGGDGGNGGDIIFVCDNNTHTLVNFKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +AQ+G GM RN++G KGE++ L VP GTQV + ++ DL +EGQR + GG Sbjct: 62 RELRAQNGAGGMGRNKNGKKGENLELIVPEGTQVIDAQTNEILLDLTKEGQRELFLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK +TNQ P YA PGI G+ +++ L+LKLIAD+G++G PN GKST ++ V+ A Sbjct: 122 GGLGNTHFKHATNQRPDYAQPGIKGESRLVRLELKLIADVGLVGFPNVGKSTLISVVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+V Y F++ADIPGII+ A G G+G FLKH ERT LL Sbjct: 182 KPEIANYEFTTLTPKLGLVDVNEYNSFVMADIPGIIEGASGGKGLGLAFLKHIERTSFLL 241 Query: 242 HIVSALEEN-VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-----SDTLARKKNE 295 ++ + + ++ + + EL +++EL + + +S+ D+V ++ +A NE Sbjct: 242 FVLDPMRQMPLKEQFIVLRKELEKFSNELFGRKFGIMISKSDSVRLGEEFAEQIALNINE 301 Query: 296 LATQCGQV--PFEF----SSITGHGIPQILECLHDKIFSIR 330 L ++ P F SS+ G+ ++ L ++I ++R Sbjct: 302 LDNYLKEINNPQSFLIKVSSLEKTGLKELKFMLLEEIKTLR 342 >gi|313902193|ref|ZP_07835601.1| GTP-binding protein Obg/CgtA [Thermaerobacter subterraneus DSM 13965] gi|313467528|gb|EFR63034.1| GTP-binding protein Obg/CgtA [Thermaerobacter subterraneus DSM 13965] Length = 458 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 137/326 (42%), Positives = 202/326 (61%), Gaps = 4/326 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DEA++Y+ G GG G +SFRREK++ GGPDGG GGRGGDV + L TL D RY+ Sbjct: 7 FVDEAEIYVEGGTGGNGAVSFRREKYVPRGGPDGGDGGRGGDVILVVDPALTTLADLRYR 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H++A G G NR G +GED+ + VP GT V + D ++ DL GQ++++A GG Sbjct: 67 RHYRAGRGTHGEGGNRHGRRGEDLYVRVPPGTVVRDRDTGDVLADLADPGQQVVVARGGR 126 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F + +AP A G G+ + + L+L+L+AD+G++G PNAGKS+ LA ++ A Sbjct: 127 GGRGNARFATPQRKAPRLAEKGEPGERRWLKLELRLLADVGLVGWPNAGKSSLLARISAA 186 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PK+A YPFTTL PNLG+V+ G + F++ADIPG+I+ A+QG G+G FL+H +RT VL+ Sbjct: 187 RPKVAAYPFTTLAPNLGVVQRGPGRSFVVADIPGLIEGANQGVGLGHEFLRHIQRTRVLI 246 Query: 242 HIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++V A + Q + DEL AY L + +V ++ D + E A Sbjct: 247 YVVDAAATEGRDPRQDLATLRDELEAYEPALLDRPGVVAANKTDLPQAAQHLPALEEAAR 306 Query: 299 QCGQVPFEFSSITGHGIPQILECLHD 324 G S+ TG G+ ++L + + Sbjct: 307 AAGLELVPISAATGEGVDRLLNRVEE 332 >gi|78777611|ref|YP_393926.1| GTPase ObgE [Sulfurimonas denitrificans DSM 1251] gi|123550027|sp|Q30QP0|OBG_SULDN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|78498151|gb|ABB44691.1| GTP-binding protein, HSR1-related [Sulfurimonas denitrificans DSM 1251] Length = 369 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 130/289 (44%), Positives = 185/289 (64%), Gaps = 2/289 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D ++ + SG GG G +SFRREKF+ GGP+GG GG+GGD+W + +N +TL F+ + Sbjct: 2 FTDVVELTVSSGKGGQGCVSFRREKFVVNGGPNGGDGGKGGDIWFKCDNNTHTLSHFQKK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G G N SG G V+ VP GTQ+ + D ++ D+ +GQ + GG Sbjct: 62 MHIKADNGAPGESSNMSGKSGVKKVIIVPPGTQIIDMDSEEVLFDMLIDGQEELFISGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSSTNQ P YA PG G+ + I L LKLIAD+G++G PN GKST +++V+ A Sbjct: 122 GGLGNTHFKSSTNQRPTYAQPGEKGETRRIKLDLKLIADVGLVGFPNVGKSTLISTVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IA+Y FTTL P LG V G ++ FI+ADIPGII AH+G G+G FL+H ERT +LL Sbjct: 182 RPEIANYEFTTLTPKLGQVNIGDFESFIMADIPGIIGGAHEGKGLGIEFLRHIERTQILL 241 Query: 242 HIVS-ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 +V A +++ + + E+ A++ +L + L++ D V D + Sbjct: 242 FMVDLASYRDLKEQIETLKAEVGAFSDKLGSSKYAIALTRADAVAQDEI 290 >gi|254302153|ref|ZP_04969511.1| Spo0B-associated GTP-binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322345|gb|EDK87595.1| Spo0B-associated GTP-binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 428 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 145/335 (43%), Positives = 218/335 (65%), Gaps = 6/335 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + +++G+GG G +FRREKF++FGGPDGG GG+GGDV A SN+NTLIDF+++ Sbjct: 2 FIDEVIITVKAGNGGDGSAAFRREKFVQFGGPDGGDGGKGGDVVFVADSNINTLIDFKFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKAQ+GE G K+ G KGED+++ VPVGTQV + LI D+ G++ +L GG Sbjct: 62 KLFKAQNGENGQKKQMYGKKGEDLIIKVPVGTQVRDFTTGKLILDMSVNGEQRVLLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN HFK+S +AP A G G E + L+LKL+AD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGYGNVHFKNSIRKAPKIAEKGGEGAEIKVKLELKLLADVALVGYPSVGKSSFINKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K+ Y FTTL P LG+V+ E K F++ADIPG+I+ AH+G G+GD+FLKH ER ++ Sbjct: 182 NSKVGSYHFTTLEPKLGVVRLEEGKSFVIADIPGLIEGAHEGVGLGDKFLKHIERCKMIY 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 HIV A E + ++ I EL ++ +L K +IV +++D + D + + K+ LA Sbjct: 242 HIVDAAEIEGRDCIEDFEKINHELKKFSEKLAGKKQIVIANKMDLIWDMEKFEKFKSYLA 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + ++ + S + G+ +IL +D + I E Sbjct: 302 EKGIEI-YPVSVLLNEGLKEILYKTYDMLSHIERE 335 >gi|229525130|ref|ZP_04414535.1| GTP-binding protein Obg [Vibrio cholerae bv. albensis VL426] gi|229338711|gb|EEO03728.1| GTP-binding protein Obg [Vibrio cholerae bv. albensis VL426] Length = 395 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 136/291 (46%), Positives = 200/291 (68%), Gaps = 4/291 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + +++GDGG G +SF REKF+ GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 6 MKFVDEAVIKVQAGDGGNGVVSFWREKFVTNGGPDGGDGGDGGDVYMVADENLNTLIDYR 65 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A G+ G N +G G+D L VPVGT+ + +I ++ + G+++++A G Sbjct: 66 FQRFYEAGRGKNGGGGNCTGKSGKDKELRVPVGTRAIDIHTNEIIGEVAEHGKKVMIAKG 125 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSS N++P G G+ + I L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 126 GWHGLGNARFKSSVNRSPRQKTLGTKGELRDIRLELLLLADVGMLGMPNAGKSTFIRAVS 185 Query: 181 RAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A +GAG+G RFLKH ER V Sbjct: 186 AAKPKVADYPFTTLVPSLGVVSVLPEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 245 Query: 240 LLHIVSAL-EENVQAAYQC--ILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH++ + + A+ I+DEL Y+ +L KK + +++D + + Sbjct: 246 LLHMIDIMPADQSDPAHNALTIIDELEQYSEKLAKKPRWLVFNKVDLMSEE 296 >gi|241895538|ref|ZP_04782834.1| GTPase ObgE [Weissella paramesenteroides ATCC 33313] gi|241871116|gb|EER74867.1| GTPase ObgE [Weissella paramesenteroides ATCC 33313] Length = 436 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 138/334 (41%), Positives = 208/334 (62%), Gaps = 10/334 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D+ K+++++G GG G +SFR EK+I GGP GG GG GG V + L TL+DFR Sbjct: 1 MAFVDQVKIFVKAGKGGDGAVSFRHEKYINMGGPFGGDGGHGGSVVMVVDEGLRTLMDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++HFKAQ G G + +G ED+++ VP GT + + ++I DL ++GQR+++A G Sbjct: 61 YKRHFKAQVGGNGATKGMTGKSAEDLIIKVPQGTTITNAETGAVIGDLTEKGQRLVIAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F SS N AP A G G+E I L+LK++AD+G++G P+ GKST L+ VT Sbjct: 121 GRGGRGNIRFASSKNPAPEIAENGEPGEELDISLELKVLADVGLVGFPSVGKSTLLSVVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+A Y FTTL PNLG+V+ + ++F++AD+PG+I+ A +G G+G +FL+H ERT V Sbjct: 181 AAKPKVAAYHFTTLVPNLGMVRLDDGRDFVMADLPGLIEGASEGVGLGIQFLRHVERTRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 +LH++ E++ Y I EL+AY+ L ++ +I+ +++D D+ T E Sbjct: 241 ILHMIDMSGVDPEQDPYDNYLKINQELAAYDPALLERPQIIVPTKMDMPDAQTALEMFEE 300 Query: 296 LATQCGQVP-----FEFSSITGHGIPQILECLHD 324 VP SS++ G+ +L D Sbjct: 301 QLRNDDNVPDDIEIMPISSLSREGLEPLLRRTAD 334 >gi|157151616|ref|YP_001450189.1| GTPase ObgE [Streptococcus gordonii str. Challis substr. CH1] gi|261263103|sp|A8AWM9|OBG_STRGC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|157076410|gb|ABV11093.1| GTP-binding protein [Streptococcus gordonii str. Challis substr. CH1] Length = 436 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 143/329 (43%), Positives = 211/329 (64%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIQVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKAQSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETGKVLTDLVENGQEFIVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELLLELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D DS + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPDSAENLKVFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+T G+ +L+ Sbjct: 304 ANYDEFAELPQIFPISSLTKQGLATLLDA 332 >gi|163802659|ref|ZP_02196550.1| GTP1/Obg family protein [Vibrio sp. AND4] gi|159173547|gb|EDP58367.1| GTP1/Obg family protein [Vibrio sp. AND4] Length = 391 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 150/331 (45%), Positives = 215/331 (64%), Gaps = 8/331 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA V +++GDGG G +SF REKFI GGPDGG GG GGDV+IQA NLNTLID+R Sbjct: 1 MKFVDEAVVKVQAGDGGNGVVSFWREKFITKGGPDGGDGGDGGDVYIQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++ + GE G N +G +G+D++L VPVGT+ + ++ ++ + G+++++A G Sbjct: 61 FQRFYEGERGENGRGGNCTGKRGKDIILRVPVGTRAVDIHTNEIVAEVAEHGKKVMIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + I L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRQRTLGTKGEIREIRLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 181 AAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLH++ + + VQ A I+DEL Y+ +L K + ++ D + + K E Sbjct: 241 LLHMIDIMPVDQSDPVQNAL-TIIDELEQYSEKLAGKPRWLVFNKTDLMLEEEANEKIQE 299 Query: 296 LATQCGQVP--FEFSSITGHGIPQILECLHD 324 + G F+ S+I +G + L D Sbjct: 300 ILDALGWEDEYFKISAINRNGTKDLCYKLAD 330 >gi|57237103|ref|YP_178115.1| GTPase ObgE [Campylobacter jejuni RM1221] gi|148926896|ref|ZP_01810574.1| putative GTP-binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|81557627|sp|Q5HX70|OBG_CAMJR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|57165907|gb|AAW34686.1| GTP-binding protein, GTP1/Obg family [Campylobacter jejuni RM1221] gi|145844473|gb|EDK21581.1| putative GTP-binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|315057536|gb|ADT71865.1| GTP-binding protein Obg [Campylobacter jejuni subsp. jejuni S3] Length = 350 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 144/341 (42%), Positives = 217/341 (63%), Gaps = 13/341 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ + SGDGG G +SFRREK + GGPDGG GG GGD+ +N +TL++F+ + Sbjct: 2 FIDSVKITLASGDGGKGAVSFRREKHVPLGGPDGGDGGNGGDIIFVCDNNTHTLVNFKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +AQ+G GM RN++G KGE++ L VP GTQV + ++ DL +EGQR + GG Sbjct: 62 RELRAQNGAGGMGRNKNGKKGENLELIVPEGTQVIDVQTNEILLDLTKEGQRELFLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK +TNQ P YA PGI G+ +++ L+LKLIAD+G++G PN GKST ++ V+ A Sbjct: 122 GGLGNTHFKHATNQRPDYAQPGIKGESRLVRLELKLIADVGLVGFPNVGKSTLISVVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+V + Y F++ADIPGII+ A G G+G FLKH ERT LL Sbjct: 182 KPEIANYEFTTLTPKLGLVDVDEYNSFVMADIPGIIEGASGGKGLGLAFLKHIERTSFLL 241 Query: 242 HIVSALEEN-VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-----SDTLARKKNE 295 ++ + + ++ + + EL +++EL + + +S+ D+V ++ +A NE Sbjct: 242 FVLDPMRQMPLKEQFIVLRKELEKFSNELFGRKFGIMISKSDSVRLGEEFAEQIALNINE 301 Query: 296 LATQCGQV--PFEF----SSITGHGIPQILECLHDKIFSIR 330 L ++ P F SS+ G+ ++ L ++I ++R Sbjct: 302 LDNYLKEINNPQSFLIKVSSLEKTGLKELKFMLLEEIKTLR 342 >gi|254525718|ref|ZP_05137770.1| GTP-binding protein Obg/CgtA [Prochlorococcus marinus str. MIT 9202] gi|221537142|gb|EEE39595.1| GTP-binding protein Obg/CgtA [Prochlorococcus marinus str. MIT 9202] Length = 327 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 130/290 (44%), Positives = 194/290 (66%), Gaps = 1/290 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A + +++G GG G +SFRREKF+ GGP GG+GGRGG V + A +NL TL+DF+ Sbjct: 1 MQFIDQANIILKAGKGGNGIVSFRREKFVPAGGPSGGNGGRGGSVILIADNNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ G KG RSGA GED +L VP GT++ + ++ DL + Q + +A G Sbjct: 61 FKREIIAEDGCKGGPNKRSGASGEDTILKVPCGTEIRDIKTGIILGDLTKHKQSLTIAIG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA++ S+ N+AP G G+ + L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GRGGHGNAYYLSNQNRAPESFTEGKDGEIWEVQLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL PNLG+V++ + ADIPG+I A G G+G FL+H +RT + Sbjct: 181 SARPKIANYPFTTLIPNLGVVRKIDGNGCLFADIPGLISGAADGVGLGHDFLRHIQRTKI 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 L+H++ ++ EN ++ I EL Y L K I+ L++++ VD D L Sbjct: 241 LVHLIDSIAENPLHDFEIIEQELKKYGKGLLDKERIIVLNKMELVDDDYL 290 >gi|322378708|ref|ZP_08053140.1| GTPase ObgE [Helicobacter suis HS1] gi|322380043|ref|ZP_08054304.1| GTPase ObgE [Helicobacter suis HS5] gi|321147512|gb|EFX42151.1| GTPase ObgE [Helicobacter suis HS5] gi|321148883|gb|EFX43351.1| GTPase ObgE [Helicobacter suis HS1] Length = 318 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 148/321 (46%), Positives = 212/321 (66%), Gaps = 12/321 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ + SG GGAG +SFRREKF+ GGPDGG GG GGDV SN +TL FR + Sbjct: 2 FVDWVEISVSSGKGGAGCVSFRREKFVMQGGPDGGDGGDGGDVIFSIDSNSDTLSAFRGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KAQ+G G +N SG +GED++L VP GTQ+FE G L+CDL + G ++L GG Sbjct: 62 KHYKAQNGAPGGPKNCSGKRGEDLILRVPPGTQIFE--GEKLLCDLIEAGN-VVLLKGGK 118 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK++ Q P YA G+ G+ + L+LKLIA +G++G PNAGKST +++++ A Sbjct: 119 GGLGNMRFKNAIKQRPTYAQKGLAGKTLSLRLELKLIAHVGLVGFPNAGKSTLISAISNA 178 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL P+LG+V+ G +KEF++ADIPGII+ A +G G+G FL+H ERT LL Sbjct: 179 KPKIAPYAFTTLIPHLGVVRVGEFKEFVMADIPGIIEGASEGKGLGLDFLRHLERTRFLL 238 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ + NVQ Y+ + EL+ ++ EL +K V +++ID + + L E+ Sbjct: 239 FVLDS-TFNVQEQYEKLRQELTKFSKELAQKEFAVVINKIDVMPAMPL-----EILEARF 292 Query: 302 QVPFEFSSITGHGIPQILECL 322 +P S++TG I +L+ L Sbjct: 293 ILP--ISAVTGESIKSLLQSL 311 >gi|260593580|ref|ZP_05859038.1| Obg family GTPase CgtA [Prevotella veroralis F0319] gi|260534463|gb|EEX17080.1| Obg family GTPase CgtA [Prevotella veroralis F0319] Length = 389 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 140/328 (42%), Positives = 210/328 (64%), Gaps = 5/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + R K+ GGPDGG GG+GG V+++ N TL+ +YQ Sbjct: 5 FVDYVKIYCRSGKGGRGSMHLRHVKYNPNGGPDGGDGGKGGSVYLRGNHNYWTLLHLKYQ 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G + G G+DV + VP GT V++ + +CD+ +GQ ++L GG Sbjct: 65 RHVYAEHGGNGGRDKCHGTDGKDVYIDVPCGTVVYDAETGKYVCDVMHDGQTVMLLKGGR 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F++STNQAP YA PG QE + L+LKL+AD+G++G PNAGKST L+S++ A Sbjct: 125 GGLGNFQFRTSTNQAPRYAQPGEPMQEMTVILELKLLADVGLVGFPNAGKSTLLSSLSSA 184 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTT+ P+LGIV + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 185 KPKIANYPFTTMEPSLGIVSYRDNQSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 244 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + K L Sbjct: 245 FMVPGDTDDIKKEYEILLNELRQFNPEMLDKHRVLAVTKCDLLDEELIEMLKETLP---D 301 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFS 328 +P F S++TG GI + + L ++ S Sbjct: 302 DLPVVFISAVTGQGIDDLKDVLWKELNS 329 >gi|15644931|ref|NP_207101.1| GTPase ObgE [Helicobacter pylori 26695] gi|3183221|sp|O25074|OBG_HELPY RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|2313401|gb|AAD07372.1| GTP-binding protein (obg) [Helicobacter pylori 26695] Length = 360 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 144/287 (50%), Positives = 194/287 (67%), Gaps = 5/287 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF D + L DL + +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCAGKKGEDKIIVVPPGTQVFVGDELWL--DLVEPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K F++ADIPGII+ A +G G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSGFLMADIPGIIEGASEGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 ++ A L+ ++ YQ + EL ++S L K V L++ D V++ Sbjct: 240 FVLDASRLDLGIKEQYQRLRLELEKFSSALANKPFGVLLNKCDVVEN 286 >gi|313681876|ref|YP_004059614.1| GTP-binding protein obg/cgta [Sulfuricurvum kujiense DSM 16994] gi|313154736|gb|ADR33414.1| GTP-binding protein Obg/CgtA [Sulfuricurvum kujiense DSM 16994] Length = 365 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 125/296 (42%), Positives = 189/296 (63%), Gaps = 2/296 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D ++ + SG GGAG ++FRREK++ GGP+GG GG+GGDV+ + +N +TL F+ Sbjct: 2 FSDSVEITVSSGKGGAGCVAFRREKYVLQGGPNGGDGGKGGDVYFKVDNNTHTLAHFQGN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++ KA+ G+ GM N +G G+ +V+ VP GTQV + + ++ DL Q+GQ + GG Sbjct: 62 KNLKAEKGQPGMGSNMAGKAGKRLVVVVPPGTQVVDVETGEVLLDLLQDGQEVRFLEGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSSTNQ P YA PG +++ L LKLIAD+G++G PN GKST +++V+ A Sbjct: 122 GGLGNVHFKSSTNQKPMYAQPGEPAVTRVVRLDLKLIADVGLVGFPNVGKSTLISTVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P++A+Y FTTL P LG + G + +I+ADIPGII A +G G+G +FL+H ERT LL Sbjct: 182 RPEVANYEFTTLTPKLGQINIGEFDSYIMADIPGIIGGAAEGKGLGLKFLRHIERTKTLL 241 Query: 242 HIVS-ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 ++ A ++ Y+ + EL ++ L K+ + L++ D + + K N Sbjct: 242 FMIDLASYHELEYQYETLKQELEKFSPLLAKRNYAIALTRADAMTPEEAVEKTNSF 297 >gi|295099553|emb|CBK88642.1| Obg family GTPase CgtA [Eubacterium cylindroides T2-87] Length = 427 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 139/331 (41%), Positives = 205/331 (61%), Gaps = 16/331 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KV+I++G GG G +SFR EK++ +GGP GG GG GG+V +A + TL+D RY Sbjct: 2 FVDQVKVHIKAGRGGDGIVSFRHEKYVAYGGPFGGDGGDGGNVIFEADPGMTTLLDLRYH 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + A GEKG + GA GED ++ VP+GT V + ++ DL + Q+ I+A GG Sbjct: 62 RKVFATPGEKGKNKKMHGANGEDKIVKVPLGTIVKVAETGQIVADLTKPHQQQIVAHGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSS N AP YA G G E ++L+++AD+G++G P+ GKSTFL +V+RA Sbjct: 122 GGRGNFHFKSSRNTAPKYAEDGKPGDEFDAIVELRVLADVGLVGFPSVGKSTFLDAVSRA 181 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +P+I DYPFTT++PN+G+V K+G + FILAD+PG+I+ A G G+G +FLKH ER V+ Sbjct: 182 RPEIGDYPFTTIHPNVGVVQTKDG-RSFILADLPGLIEGASTGKGLGHQFLKHIERCRVI 240 Query: 241 LHIV---SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH++ S+ + Y+ I +EL Y L ++ +IV +++D L K L Sbjct: 241 LHVIDMGSSEGRDPLEDYEIINNELKDYQMRLLERPQIVVANKMD------LDNAKENLE 294 Query: 298 TQCGQVP----FEFSSITGHGIPQILECLHD 324 + P FE ++I G+ +L D Sbjct: 295 RFKKKYPDVEVFETTTIIHEGLDPVLRKAAD 325 >gi|182415643|ref|YP_001820709.1| GTP-binding protein Obg/CgtA [Opitutus terrae PB90-1] gi|261277652|sp|B1ZZ37|OBG_OPITP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|177842857|gb|ACB77109.1| GTP-binding protein Obg/CgtA [Opitutus terrae PB90-1] Length = 346 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 133/341 (39%), Positives = 206/341 (60%), Gaps = 10/341 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE V +++GDGG G ISFRREK+ +GGP+GG GGRGGDV + + N L+D++YQ Sbjct: 2 FVDECVVKLQAGDGGRGCISFRREKYEPWGGPNGGDGGRGGDVILLGDDDTNNLVDYKYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H+ A+ GE G+ +++ G G VL +P+GT V +E + ++ ++GQ+I+L GGN Sbjct: 62 PHWNAERGEHGLGKDQHGKDGAHRVLKMPLGTVVIDEATGKPVAEVVEDGQQIVLCKGGN 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN HFK++T +AP AN G G+ L LK IAD+G++G PNAGKS+ +TRA Sbjct: 122 GGWGNTHFKTATTRAPKRANDGHPGERGTYRLVLKSIADVGLVGFPNAGKSSLTCLITRA 181 Query: 183 KPKIADYPFTTLYPNLGIV-----KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 +P+ A YPFTTL+P +GI+ + G + LAD+PG+I+ A + G+G RFL+H ER Sbjct: 182 RPRTAAYPFTTLHPQIGIIDYPPDRHGRRRLRLADVPGLIEGASENRGLGHRFLRHIERC 241 Query: 238 HVLLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 +LL ++ + + Y+ +L EL Y+ L KK +V +++D + K Sbjct: 242 ALLLVLIDMAGTDGRDPREDYKHLLRELELYDPALLKKPRLVAANKMDVEAAAANLSKFK 301 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 +P S +T GI + + L ++ ++RG + Sbjct: 302 RRHRTVDVLP--LSCLTSEGIELLKKELLKRVTALRGREKV 340 >gi|317008953|gb|ADU79533.1| GTPase ObgE [Helicobacter pylori India7] Length = 360 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 143/287 (49%), Positives = 193/287 (67%), Gaps = 5/287 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF +D + L DL +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCAGKKGEDKIIVVPPGTQVFADDKLWL--DLITPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K F++ADIPGII+ A QG G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSGFLMADIPGIIEGASQGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 ++ A L+ ++ Y+ + EL ++ L K V L++ D V++ Sbjct: 240 FVLDASRLDLGIKEQYKRLRLELEKFSPALANKPFGVLLNKCDVVEN 286 >gi|332365920|gb|EGJ43676.1| Spo0B-associated GTP-binding protein [Streptococcus sanguinis SK1059] Length = 436 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 144/329 (43%), Positives = 210/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIQVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKAQSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETGKVLTDLVENGQEFIVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELLLELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTHSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D DS + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPDSAENLKVFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+T G+ +L+ Sbjct: 304 ANYDEFAELPQIFPISSLTKQGLATLLDA 332 >gi|262340993|ref|YP_003283848.1| GTP-binding protein [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272330|gb|ACY40238.1| GTP-binding protein [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 328 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 136/324 (41%), Positives = 209/324 (64%), Gaps = 2/324 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K++ +SGDGG+G I F R+K I GGPDGGSGG+GGD+ IQ S+++T + RY Sbjct: 5 FVDFIKIFCKSGDGGSGCIHFYRDKHITRGGPDGGSGGKGGDIIIQGNSHIHTFLHLRYN 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+ A+ G G N +G+ G+++++ VPVGT V +E ++I ++ + ++ IL GG Sbjct: 65 KHWIAKSGSSGKGNNITGSNGKNLLIEVPVGTVVKDEKK-NIITEITKNHEKKILFEGGK 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA FK+S +++PYYA PGI + I+L+LK++AD+G+IG PN GKST L+ +T+A Sbjct: 124 GGKGNAFFKNSIHKSPYYAQPGIKKKGNWIFLELKILADVGLIGFPNTGKSTLLSVITKA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKI ++ FTT P+LG+VK + F++ADIPGII+ A +G G+G FL+H ER VLL Sbjct: 184 KPKIGNFSFTTKVPHLGVVKMDFNSFLVADIPGIIEKASEGKGLGHFFLRHAERNSVLLF 243 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQ 302 ++S+ +N Y +L+EL +NS K ++ +S+ D ++ K Sbjct: 244 LISSETKNKIQEYFILLNELKKFNSNFLNKKRLLAISKSDLINRKKKDEVKKIFLNSKED 303 Query: 303 VPFEFSSITGHGIPQILECLHDKI 326 + F SS T G+ ++ E L + I Sbjct: 304 IIF-ISSFTKEGLIELKEKLWNLI 326 >gi|324993256|gb|EGC25176.1| Spo0B-associated GTP-binding protein [Streptococcus sanguinis SK405] Length = 436 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 144/329 (43%), Positives = 209/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIQVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKAQSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETGKVLTDLVENGQEFIVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELLLELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTHSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D DS + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPDSAENLKEFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + +P F SS+T G+ +L+ Sbjct: 304 ANYDEFADLPQIFPISSLTKQGLATLLDA 332 >gi|319425381|gb|ADV53455.1| GTP-binding protein Obg/CgtA [Shewanella putrefaciens 200] Length = 389 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 137/287 (47%), Positives = 198/287 (68%), Gaps = 6/287 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG+G +SFRREK++ GGPDGG GG GG V++QA N NTLI+FR Sbjct: 1 MKFVDEAVIRVEAGDGGSGCVSFRREKYVPDGGPDGGDGGDGGSVYLQADENFNTLIEFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ GE G R+ +G G+D++L VPVGT+ + D ++ DL GQ++++A G Sbjct: 61 FERFHMAERGENGRGRDCTGHSGKDLILKVPVGTRAVDHDTEEVLGDLTTHGQKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ +V+ Sbjct: 121 GFHGLGNTRFKSSTNRAPRQKTLGTPGEVRSLKLELLLLADVGLLGMPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 RA PK+ADYPFTTL PNLG+V + F++ADIPG+I+ A GAG+G RFLKH ER + Sbjct: 181 RATPKVADYPFTTLVPNLGVVNPRPGQSFVIADIPGLIEGAADGAGLGIRFLKHLERCRI 240 Query: 240 LLHIVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 LLHI+ + V++A + I+ EL Y+ +L K + ++ D Sbjct: 241 LLHIIDIEPIDGTDPVESA-RAIVGELEKYSPKLASKPRWLVFNKTD 286 >gi|33866460|ref|NP_898019.1| GTPase ObgE [Synechococcus sp. WH 8102] gi|81835067|sp|Q7U4Y5|OBG_SYNPX RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|33633238|emb|CAE08443.1| GTP1/Obg family GTP-binding protein [Synechococcus sp. WH 8102] Length = 330 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 142/321 (44%), Positives = 205/321 (63%), Gaps = 1/321 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ +R G GG G +FRREK++ GGP GG GG GG V ++A SNL TL+DF+ Sbjct: 1 MQFIDQARITVRGGRGGDGIAAFRREKYVPAGGPSGGDGGHGGPVVLEADSNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F A G +G +GA G D+V+ VP GT+V L+ DL G+R+ +A G Sbjct: 61 YKRLFAADDGRRGGPNKCTGASGRDLVIKVPCGTEVRHLATGILLGDLTDPGERLTVAFG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S+ N+AP G G+E + L+LKL+A++GIIGLPNAGKST +A ++ Sbjct: 121 GRGGLGNAHYLSNRNRAPEKFTEGRDGEEWPLQLELKLLAEVGIIGLPNAGKSTLIAVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ + + ADIPG+I A QGAG+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRRPSGDGTVFADIPGLIAGAAQGAGLGHDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V A ++ + + EL AY L + ++ L++ + + + L NEL Sbjct: 241 LIHVVDAGADDPVGDLRVVEKELEAYGHGLVDRPRLLVLNKQELLLDEQLPELSNELEQV 300 Query: 300 CGQVPFEFSSITGHGIPQILE 320 G+ P S+ G + Q+LE Sbjct: 301 SGRAPLCISAAMGRNLDQLLE 321 >gi|325696718|gb|EGD38606.1| Spo0B-associated GTP-binding protein [Streptococcus sanguinis SK160] Length = 436 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 144/329 (43%), Positives = 210/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIQVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKAQSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETGKVLTDLVENGQEFIVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELLLELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTHSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D DS + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPDSAENLKVFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+T G+ +L+ Sbjct: 304 ANYDEFAELPQIFPISSLTKQGLATLLDA 332 >gi|325688368|gb|EGD30387.1| Spo0B-associated GTP-binding protein [Streptococcus sanguinis SK72] Length = 436 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 143/329 (43%), Positives = 211/329 (64%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIQVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKAQSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETGKVLTDLVENGQEFIVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELLLELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D DS + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPDSAENLKIFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+T G+ +L+ Sbjct: 304 ANYDEFAELPQIFPISSLTKQGLATLLDA 332 >gi|290890598|ref|ZP_06553669.1| hypothetical protein AWRIB429_1059 [Oenococcus oeni AWRIB429] gi|290479726|gb|EFD88379.1| hypothetical protein AWRIB429_1059 [Oenococcus oeni AWRIB429] Length = 436 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 142/332 (42%), Positives = 209/332 (62%), Gaps = 8/332 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D+A + +++G+GG G ISFR EKF+ GGP GG GG+GGD++ L TL+DFR Sbjct: 1 MAFVDQATIEMKAGNGGDGIISFRHEKFVPLGGPFGGDGGKGGDIYFIVDEGLRTLMDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HF+A+HGEKG + +GA +D+ + VP GT + D I DL + G++ ++A G Sbjct: 61 YNRHFRAKHGEKGGTKGMTGASADDLYVKVPTGTIISNADTNQQIVDLTENGKKFLIAHG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F + +N AP + G G+ + L+L+++AD+G++G P+AGKSTFL+ VT Sbjct: 121 GRGGRGNMRFATPSNPAPEISENGEPGETLKVKLELRVLADVGLVGFPSAGKSTFLSVVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA Y FTT+ PNLG+V+ ++F +AD+PG+IK A +G G+G FL+H ERT V Sbjct: 181 AARPKIAAYHFTTIDPNLGMVQLPDGRDFTIADLPGLIKGASKGVGLGFEFLRHVERTRV 240 Query: 240 LLHIVSALEEN-----VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKK 293 LLH++ EE+ AY I EL +Y+ L + I+ +++D S L K Sbjct: 241 LLHMIDMSEESGLGIKPFEAYLQINQELKSYDPRLLDRPMIIVATKMDLPSSKANLEDFK 300 Query: 294 NELATQCGQVPF-EFSSITGHGIPQILECLHD 324 ELA + +P E SS+T G Q+L + D Sbjct: 301 QELANRQINMPIVEISSVTQTGTKQLLLKVAD 332 >gi|15611357|ref|NP_223008.1| GTPase ObgE [Helicobacter pylori J99] gi|10720359|sp|Q9ZMD3|OBG_HELPJ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|4154802|gb|AAD05858.1| putative [Helicobacter pylori J99] Length = 360 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 151/330 (45%), Positives = 207/330 (62%), Gaps = 12/330 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF D + L DL + +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCAGKKGEDKIIVVPPGTQVFVGDELWL--DLVEPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A +G G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASEGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 ++ A L+ ++ Y+ + EL ++ L K V L++ D V++ NE+ Sbjct: 240 FVLDASRLDLGIKEQYKRLRLELEKFSPTLANKPFGVLLNKCDVVEN------INEMTKD 293 Query: 300 -CGQVPFEFSSITGHGIPQILECLHDKIFS 328 C + E + + L LH + S Sbjct: 294 FCAFLNLEAQKLNAFDLEPYLGFLHPNLTS 323 >gi|157412577|ref|YP_001483443.1| GTPase ObgE [Prochlorococcus marinus str. MIT 9215] gi|261277674|sp|A8G2M6|OBG_PROM2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|157387152|gb|ABV49857.1| GTP1/OBG family protein [Prochlorococcus marinus str. MIT 9215] Length = 327 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 130/290 (44%), Positives = 194/290 (66%), Gaps = 1/290 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A + +++G GG G +SFRREKF+ GGP GG+GGRGG V + A +NL TL+DF+ Sbjct: 1 MQFIDQANIILKAGKGGNGIVSFRREKFVPAGGPSGGNGGRGGSVILIADNNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ G KG RSGA GED +L VP GT++ + ++ DL + + + +A G Sbjct: 61 FKREIIAKDGCKGGPNKRSGASGEDTILKVPCGTEIRDIKTGIILGDLTKHKESLTIAIG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA++ S+ N+AP G G+ + L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GRGGHGNAYYLSNQNRAPESFTEGKDGEIWEVQLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL PNLG+V++ + ADIPG+I A G G+G FL+H +RT + Sbjct: 181 SARPKIANYPFTTLIPNLGVVRKIDGNGCLFADIPGLISGAADGVGLGHDFLRHIQRTKI 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 LLH++ ++ EN ++ I EL Y L K I+ L++++ VD D L Sbjct: 241 LLHLIDSIAENPLHDFEIIEQELQKYGKGLLDKERIIVLNKMELVDDDYL 290 >gi|150015401|ref|YP_001307655.1| GTPase ObgE [Clostridium beijerinckii NCIMB 8052] gi|261266734|sp|A6LQR9|OBG_CLOB8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|149901866|gb|ABR32699.1| GTP-binding protein Obg/CgtA [Clostridium beijerinckii NCIMB 8052] Length = 430 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 141/323 (43%), Positives = 208/323 (64%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AKV+++SG+GG G ISFRREK++ GGPDGG GG+GG + Q + + TL+DF+Y+ Sbjct: 2 FIDTAKVFVKSGNGGNGAISFRREKYVPLGGPDGGDGGKGGSIIFQVETGITTLLDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A+ GE G G GE + + VP+GT + E + +I DL +GQ ++L GG Sbjct: 62 KKFIAESGENGGGSKCYGKDGESLYIKVPMGTIIREAETNKIIADLSHKGQELVLLRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++T QAP+YA PG+ G E I L+LKL+AD+G++G PN GKST L+ T+A Sbjct: 122 GGKGNVKFATATKQAPHYAEPGMPGDELNIVLELKLLADVGLLGFPNVGKSTLLSMTTKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V +G F++ADIPGII+ A +G G+G +FL+H ERT +L+ Sbjct: 182 KPKIANYHFTTLKPNLGVVAVDGIDPFVMADIPGIIEGAAEGVGLGIQFLRHIERTRLLI 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 HIV S +E + + I +EL Y+ +L + +IV ++ D + D K ++ Sbjct: 242 HIVDISGVEGRDPFEDFIKINEELKKYSVKLWDRPQIVVANKSDMLYDEGIFEDFKKKVQ 301 Query: 298 TQCGQVPFEFSSITGHGIPQILE 320 F+ S+ T G+ +++ Sbjct: 302 EMGFDKVFKMSAATNEGVDAVMK 324 >gi|116491095|ref|YP_810639.1| GTPase [Oenococcus oeni PSU-1] gi|118586933|ref|ZP_01544366.1| GTP-binding protein, GTP1/Obg family [Oenococcus oeni ATCC BAA-1163] gi|122276723|sp|Q04EZ8|OBG_OENOB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|116091820|gb|ABJ56974.1| Predicted GTPase [Oenococcus oeni PSU-1] gi|118432660|gb|EAV39393.1| GTP-binding protein, GTP1/Obg family [Oenococcus oeni ATCC BAA-1163] Length = 436 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 142/332 (42%), Positives = 209/332 (62%), Gaps = 8/332 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D+A + +++G+GG G ISFR EKF+ GGP GG GG+GGD++ L TL+DFR Sbjct: 1 MAFVDQATIEMKAGNGGDGIISFRHEKFVPLGGPFGGDGGKGGDIYFIVDEGLRTLMDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HF+A+HGEKG + +GA +D+ + VP GT + D I DL + G++ ++A G Sbjct: 61 YNRHFRAKHGEKGGTKGMTGASADDLYVKVPAGTIISNADTNQQIVDLTENGKKFLIAHG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F + +N AP + G G+ + L+L+++AD+G++G P+AGKSTFL+ VT Sbjct: 121 GRGGRGNMRFATPSNPAPEISENGEPGETLKVKLELRVLADVGLVGFPSAGKSTFLSVVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA Y FTT+ PNLG+V+ ++F +AD+PG+IK A +G G+G FL+H ERT V Sbjct: 181 AARPKIAAYHFTTIDPNLGMVQLPDGRDFTIADLPGLIKGASKGVGLGFEFLRHVERTRV 240 Query: 240 LLHIVSALEEN-----VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKK 293 LLH++ EE+ AY I EL +Y+ L + I+ +++D S L K Sbjct: 241 LLHMIDMSEESGLGIKPFEAYLQINQELKSYDPRLLDRPMIIVATKMDLPSSKANLEDFK 300 Query: 294 NELATQCGQVPF-EFSSITGHGIPQILECLHD 324 ELA + +P E SS+T G Q+L + D Sbjct: 301 QELANRQINMPIVEISSVTQTGTKQLLLKVAD 332 >gi|332362676|gb|EGJ40474.1| Spo0B-associated GTP-binding protein [Streptococcus sanguinis SK49] Length = 436 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 144/329 (43%), Positives = 210/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIQVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKAQSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETGKVLTDLVENGQEFIVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELLLELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTHSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D DS + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPDSAENLKVFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+T G+ +L+ Sbjct: 304 ANYDEFAELPQIFPISSLTKQGLATLLDA 332 >gi|313903964|ref|ZP_07837344.1| GTP-binding protein Obg/CgtA [Eubacterium cellulosolvens 6] gi|313471113|gb|EFR66435.1| GTP-binding protein Obg/CgtA [Eubacterium cellulosolvens 6] Length = 432 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 138/342 (40%), Positives = 208/342 (60%), Gaps = 10/342 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+ I SG GG G +SFRREK++ GGPDGG GG GG + + LNTL FR++ Sbjct: 2 FADRAKILIVSGKGGDGHVSFRREKYVAAGGPDGGDGGNGGSIVFEVDEGLNTLAPFRHK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 FKA G++G K+ G G+D++L VP GT + + +I D+ + +R ++ GG Sbjct: 62 YKFKAGDGQEGGKKRCHGKDGQDIILKVPEGTVIMDAASGKVIADMSGDNRRQVILKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +F ++T Q P +A PG +E + L+LKLIAD+G++G P+ GKSTFL+ V+ A Sbjct: 122 GGKGNMNFATATMQVPKFAQPGQPAREIEVRLELKLIADVGLVGFPSVGKSTFLSRVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA Y FTTL PNLG+V EG F++ADIPG+I+ A +GAG+GD FL+H ER +L+ Sbjct: 182 QPKIAAYHFTTLVPNLGVVDVEGCNGFVIADIPGLIEGASEGAGLGDEFLRHIERCRMLI 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTV-----DSDTLARKK 293 H V A + I +ELS Y+ L +++ ++ D + + D + + + Sbjct: 242 HEVDAAGSEGRDPIDDINKINNELSRYSERLANLPQVIAANKTDLIFTEDGEEDPVEKIR 301 Query: 294 NELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 E + +V F S+ TG G+ ++L + +++ I E +F Sbjct: 302 KEFEPKGYKV-FPISAATGKGLKELLYYVQNRLDEIPKEEQF 342 >gi|325690034|gb|EGD32038.1| Spo0B-associated GTP-binding protein [Streptococcus sanguinis SK115] Length = 436 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 144/329 (43%), Positives = 210/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIQVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKAQSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETGKVLTDLVENGQEFIVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELLLELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTHSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D DS + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPDSAENLKVFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+T G+ +L+ Sbjct: 304 ANYDEFAELPQIFPISSLTKQGLATLLDA 332 >gi|226357263|ref|YP_002787003.1| GTPase ObgE [Deinococcus deserti VCD115] gi|226319253|gb|ACO47249.1| putative GTP-binding protein [Deinococcus deserti VCD115] Length = 446 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 137/329 (41%), Positives = 205/329 (62%), Gaps = 9/329 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F D + + +G+GG G +SF R KF+E GGPDGG GG+GG + ++A + +L Sbjct: 1 MAFRDVLNIEVAAGNGGDGSMSFHRAKFMEKGGPDGGHGGKGGSIILRAIEGVESLERLV 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ FKA +G G R R G+ GED+ + VPVGT F+ED +I DL + GQ ++A G Sbjct: 61 GRRKFKAPNGAYGEGRLRQGSDGEDIYIDVPVGTTAFDEDTGKVIADLVRVGQEKVIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN+ F SST QAP +A G GQ++ + L+L+LIAD+G++G PNAGKS+ LA+++ Sbjct: 121 GLGGRGNSTFTSSTRQAPRFAELGTPGQKRRVRLELRLIADVGLVGYPNAGKSSLLAALS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEG-------YKEFILADIPGIIKNAHQGAGIGDRFLKH 233 RA P IADYPFTTL P LG+V + F LADIPGII+ A +G G+G FL+H Sbjct: 181 RANPAIADYPFTTLSPILGVVDRVDAHGSPLDERFTLADIPGIIEGASEGKGLGLEFLRH 240 Query: 234 TERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 RT +L++++ + V+ Q + EL AY+ L + ++ L++++ V+ D + Sbjct: 241 ISRTRLLIYVLDVTRDPVEELRQ-LQAELQAYDPTLLDNVALIALNKVELVEDDLAVMVE 299 Query: 294 NELATQCGQVPFEFSSITGHGIPQILECL 322 +ELAT G + S+ G G+ ++ E + Sbjct: 300 DELAT-YGLPVLKVSAKEGTGLAELREII 327 >gi|226227308|ref|YP_002761414.1| GTP-binding protein [Gemmatimonas aurantiaca T-27] gi|226090499|dbj|BAH38944.1| GTP-binding protein [Gemmatimonas aurantiaca T-27] Length = 340 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 128/283 (45%), Positives = 189/283 (66%), Gaps = 1/283 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V + +G GG+G SFRREK++ GGPDGG GGRGGDV ++ NL TL+D+ Y+ Sbjct: 2 FVDRVLVKVEAGTGGSGQTSFRREKYVPMGGPDGGDGGRGGDVIVRGDRNLTTLLDYTYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +KA+ G+ G NR+G G+DVVL VP GT + + L+ ++ + +++A GG Sbjct: 62 DSWKAERGQHGEGSNRTGRSGDDVVLPVPPGTIIRDSRTKELLGEVMEHDDTVLVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F ++T+Q+P PG G+ + + L+LKLIAD+G +G PNAGKST L+ ++ A Sbjct: 122 GGKGNAFFVTATHQSPREWQPGEEGEMRTLELELKLIADVGFVGQPNAGKSTLLSVISAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADYPFTTL PNLG+V ++ F++ADIPGII+ AH+G G+G +FL+H ERT +L Sbjct: 182 RPKIADYPFTTLSPNLGVVPLSDHRSFVVADIPGIIEGAHEGKGLGLQFLRHIERTRLLA 241 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 ++ + QA + E+++Y+ EL K V S++D + Sbjct: 242 FLIPIDAMDWQAELDQLRHEIASYSEELAAKPYCVVFSKLDLL 284 >gi|225870790|ref|YP_002746737.1| GTP-binding protein [Streptococcus equi subsp. equi 4047] gi|261263101|sp|C0MBS1|OBG_STRE4 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|225700194|emb|CAW94366.1| putative GTP-binding protein [Streptococcus equi subsp. equi 4047] Length = 437 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 144/329 (43%), Positives = 209/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AKV +++G GG G ++FRREK++ GGP GG GG+GG V + L TLIDFRY Sbjct: 4 FLDTAKVSVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLIDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED++++VP GT V + + ++ DL + GQ ++A GG Sbjct: 64 RKFKAKSGEKGMTKGMHGRGSEDLIISVPQGTTVRDAETGKVLTDLVEHGQEFVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+IK A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGESFAMADLPGLIKGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL AYN L ++ +I+ +++D ++ + L R K +LA Sbjct: 244 HVIDMSAAEGRDPYEDYVAINKELEAYNLRLMERPQIIVANKMDMPEAKEQLQRFKEQLA 303 Query: 298 TQCG---QVP--FEFSSITGHGIPQILEC 321 Q ++P F SS+ G+ +LE Sbjct: 304 AQYDDFEELPIIFPISSLAHQGLDSLLEA 332 >gi|313897341|ref|ZP_07830884.1| Obg family GTPase CgtA [Clostridium sp. HGF2] gi|312957711|gb|EFR39336.1| Obg family GTPase CgtA [Clostridium sp. HGF2] Length = 429 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 133/321 (41%), Positives = 203/321 (63%), Gaps = 6/321 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D KV++++G GG G ++FRREK++ +GGP GG GG GGDV TL+D RY Sbjct: 2 FIDRVKVHVKAGKGGDGIVAFRREKYVAYGGPSGGDGGAGGDVVFMVDEGKTTLLDLRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + A+ G G + GA G D ++ VP GT V +E ++ DL ++GQ+ I+A GG Sbjct: 62 RKMAAEPGGNGKTKKMHGADGADCIIKVPQGTLVKDEKTGRILADLTRKGQKEIIAKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSS N AP Y+ G G+E+ I ++LK++AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNFHFKSSKNTAPQYSELGAPGEERDIMVELKVLADVGLVGFPSVGKSTLLSVVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL PNLG+V+ + F++AD+PG+I+ A +G G+G +FL+H ER V++ Sbjct: 182 KPEIAEYHFTTLAPNLGMVQVPDGRSFVMADLPGLIEGASEGKGLGHQFLRHIERCRVII 241 Query: 242 HIVSALEENVQ---AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V + + A Y+ I DEL Y L ++ +IV +++D +D K+ A Sbjct: 242 HVVDMGANDGRDPVADYKTINDELKQYEYRLMERPQIVLANKMD-LDGAQENLKRFRKAY 300 Query: 299 QCGQVPFEFSSITGHGIPQIL 319 +V FE ++I G+ +L Sbjct: 301 PEVEV-FETTTIIAEGLEPVL 320 >gi|256396376|ref|YP_003117940.1| GTPase ObgE [Catenulispora acidiphila DSM 44928] gi|256362602|gb|ACU76099.1| GTP-binding protein Obg/CgtA [Catenulispora acidiphila DSM 44928] Length = 500 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 134/344 (38%), Positives = 201/344 (58%), Gaps = 18/344 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+++ +G+GG G S RREKF GGPDG +GGRGGD+ + N N+L+D+ + Sbjct: 4 FVDRVKLHVTAGNGGHGCASVRREKFKPLGGPDGANGGRGGDIVLVVDPNTNSLLDYHFS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G ++GA G D+VL VP GT V + G ++ DL G R ++A GG Sbjct: 64 PHRKATNGKPGGGDFQTGANGVDLVLPVPSGTVVKDAFG-EVVADLVGGGTRFVVAHGGI 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA +S +AP +A G G + L+LK +AD+ ++G P+AGKS+ +A+V+ A Sbjct: 123 GGLGNAALSTSKRKAPGFALLGEPGDDGEFTLELKSVADVALVGYPSAGKSSLIAAVSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A G G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVSAGESVYTIADVPGLIPGASDGKGLGHEFLRHIERCAVLVH 242 Query: 243 IV--SALEENVQ--AAYQCILDELSAYNS-----------ELRKKIEIVGLSQIDTVDSD 287 ++ + LE + + I EL AY +L + +V L++ D + Sbjct: 243 VLDCATLESDRDPISDLDVIEAELRAYEDSRDESEWGIYGKLSDRPRLVVLNKTDIPEGQ 302 Query: 288 TLAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 LA + ELA + V +E S+++ G+ ++ L + + R Sbjct: 303 DLADIVRPELAARGLDV-YEVSAVSRAGLRELSFALAKIVDTAR 345 >gi|327458617|gb|EGF04965.1| Spo0B-associated GTP-binding protein [Streptococcus sanguinis SK1057] Length = 436 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 143/329 (43%), Positives = 211/329 (64%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIQVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKAQSGEKGMTKGMHGRGSEDLIVRVPQGTTVRDAETGKVLTDLVENGQEFIVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELLLELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D DS + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPDSAENLKIFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+T G+ +L+ Sbjct: 304 ANYDEFAELPQIFPISSLTKQGLATLLDA 332 >gi|325474303|gb|EGC77491.1| GTP1/Obg family GTP-binding protein [Treponema denticola F0402] Length = 382 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 131/302 (43%), Positives = 193/302 (63%), Gaps = 3/302 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 +KF DE+K+ + SG GG G I+FRREK++ GGP GG GGRGGD+ + N+ TL+ R Sbjct: 2 VKFADESKIRVSSGKGGNGCIAFRREKYVPMGGPSGGDGGRGGDLIFEIRRNMRTLVHLR 61 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDL-DQEGQRIILAP 119 +++ +KA++G G R G KG+D ++ +P G + + D I D D E R + Sbjct: 62 HKRVYKAKNGGGGEGSQRFGKKGDDCIIPLPPGCVIKDPDTGKTILDFGDAEEGRFVFLK 121 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GGNGG+GN HFK+STNQAP A PG G+ + I ++L +IADIG++G PNAGKS+ L Sbjct: 122 GGNGGWGNCHFKTSTNQAPKTALPGQEGETREIIVELNIIADIGLVGFPNAGKSSLLDYF 181 Query: 180 TRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 T A+PKIA YPFTT PNLG+++ + ++ I+ADIPGI++ A +G G+G RFLKH R+ Sbjct: 182 TNARPKIAPYPFTTKIPNLGVLRVDEERDVIIADIPGILEGASEGIGLGIRFLKHIARSA 241 Query: 239 VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 L ++ ++N AY + EL +Y+ EL +K I+ +++D D+ + KN + Sbjct: 242 GLAFLIDLSDDNYLRAYDVLCKELESYSKELAQKKRIIIATKLDLPDTKERFTELKNAIP 301 Query: 298 TQ 299 Q Sbjct: 302 DQ 303 >gi|32265507|ref|NP_859539.1| GTPase ObgE [Helicobacter hepaticus ATCC 51449] gi|81666623|sp|Q7VK84|OBG_HELHP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|32261555|gb|AAP76605.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 347 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 133/282 (47%), Positives = 195/282 (69%), Gaps = 2/282 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++I SG GGAG +SFRREKF+ GGPDGG GG GGDV+++ +N +TL FR Sbjct: 2 FVDSVDIFIASGKGGAGAVSFRREKFVIHGGPDGGDGGDGGDVYVEVDNNTDTLSKFRGA 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KA++G+ G R SG +G DVV+ VP+GTQ+ + D LI D+D R+ L GG Sbjct: 62 RHYKAKNGQPGGSRRCSGKRGNDVVIKVPLGTQILDFDTKELIVDMDTCPMRVCLLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++ NQAP YA G+ G+EK I L+LKLIAD+G++G PN GKST +++++ A Sbjct: 122 GGLGNTHFKNAANQAPTYAQSGLSGEEKHILLELKLIADVGLVGFPNVGKSTLISTLSNA 181 Query: 183 KPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP++A+Y FTTL P+LG+V + + F++ADIPGII+ A G G+G FLKH ERT LL Sbjct: 182 KPEVANYEFTTLIPHLGVVDADEFSSFVMADIPGIIEGASGGKGLGIAFLKHIERTGFLL 241 Query: 242 HIVSAL-EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 ++ + E++++ ++ + EL ++ L ++ + LS+ D Sbjct: 242 FVLDIMREQSLKEQWEILSLELEKFSPILSQRAFGIVLSKSD 283 >gi|125717655|ref|YP_001034788.1| GTPase ObgE [Streptococcus sanguinis SK36] gi|261277712|sp|A3CM33|OBG_STRSV RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|125497572|gb|ABN44238.1| GTP-binding protein, putative [Streptococcus sanguinis SK36] Length = 436 Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 144/329 (43%), Positives = 210/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIQVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKAQSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETGKVLTDLVENGQEFIVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELLLELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTHSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D DS + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPDSAENLKIFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+T G+ +L+ Sbjct: 304 ANYDEFAELPQIFPISSLTKQGLATLLDA 332 >gi|15805125|ref|NP_293810.1| GTPase ObgE [Deinococcus radiodurans R1] gi|81858968|sp|Q9RY66|OBG_DEIRA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|6457748|gb|AAF09676.1|AE001871_8 GTP-binding protein Obg [Deinococcus radiodurans R1] Length = 438 Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 204/329 (62%), Gaps = 9/329 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F D + + +G+GG G +SF R K++E GGPDGG GGRGG + ++A + +L Sbjct: 1 MAFRDVLNIEVAAGNGGDGSMSFHRAKYMEKGGPDGGHGGRGGSIILRAIEGVESLERLV 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ FKA++G G R R GA G+D + VPVGT F+ED +I DL GQ ++A G Sbjct: 61 GRRKFKAENGRYGEGRLRQGADGQDTYIDVPVGTTAFDEDSGKVIADLVNVGQEKVIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN+ F SST QAP +A G GQ++ + L+L+LIAD+G++G PNAGKS+ LA+++ Sbjct: 121 GLGGRGNSTFTSSTRQAPRFAELGTPGQKRRVRLELRLIADVGLVGYPNAGKSSLLAALS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-------FILADIPGIIKNAHQGAGIGDRFLKH 233 RA P IADYPFTTL P LG+V+ ++ F +ADIPGII+ A +G G+G FL+H Sbjct: 181 RANPAIADYPFTTLSPILGVVQREDEQGVSLDERFTMADIPGIIEGASEGKGLGLEFLRH 240 Query: 234 TERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 RT +L++++ V+ Q + EL AY+ L + +V L++++ V+ D + Sbjct: 241 ISRTRLLVYVLDVTRNPVE-ELQQLQAELRAYDPSLLDNVALVALNKVELVEPDLAQMVE 299 Query: 294 NELATQCGQVPFEFSSITGHGIPQILECL 322 +ELA Q G + S+ G G+ + E L Sbjct: 300 DELAEQ-GLPVLQVSAKEGTGLNTLRETL 327 >gi|57168774|ref|ZP_00367905.1| GTP-binding protein Obg [Campylobacter coli RM2228] gi|305432483|ref|ZP_07401645.1| obg family GTPase CgtA [Campylobacter coli JV20] gi|57019821|gb|EAL56504.1| GTP-binding protein Obg [Campylobacter coli RM2228] gi|304444522|gb|EFM37173.1| obg family GTPase CgtA [Campylobacter coli JV20] Length = 351 Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 133/285 (46%), Positives = 193/285 (67%), Gaps = 2/285 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ + SGDGG G +SFRREK + GGPDGG GG GGD+ +N +TL++F+ + Sbjct: 2 FIDSVKITLASGDGGKGAVSFRREKHVPLGGPDGGDGGNGGDIIFVCDNNTHTLVNFKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +AQ+G GM RN++G KGE++ L VP GTQV + ++ DL +EGQR + GG Sbjct: 62 RELRAQNGAGGMGRNKNGKKGENLELIVPEGTQVIDAQTNEVLLDLTKEGQRELFLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK +TNQ P YA PGI G+ +++ L+LKLIAD+G++G PN GKST ++ V+ A Sbjct: 122 GGLGNTHFKHATNQRPDYAQPGIKGESRLVRLELKLIADVGLVGFPNVGKSTLISVVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+V + Y F++ADIPGII+ A G G+G FLKH ERT LL Sbjct: 182 KPEIANYEFTTLTPKLGLVDVDEYNSFVMADIPGIIEGASGGKGLGLAFLKHIERTSFLL 241 Query: 242 HIVSALEEN-VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 ++ + E ++ + + EL +++EL + + +S+ D+V+ Sbjct: 242 FVLDPMREMPLKEQFIVLRKELEKFSNELFGREFGIMISKSDSVN 286 >gi|260654979|ref|ZP_05860467.1| Obg family GTPase CgtA [Jonquetella anthropi E3_33 E1] gi|260630294|gb|EEX48488.1| Obg family GTPase CgtA [Jonquetella anthropi E3_33 E1] Length = 446 Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 214/329 (65%), Gaps = 14/329 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 +KF+D ++++ +G GG G +SFRREKF+ GGPDGG GGRGGDV++QA L TL D++ Sbjct: 14 LKFVDLVRIHVSAGRGGNGCMSFRREKFVPKGGPDGGDGGRGGDVYVQADQRLVTLADYQ 73 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F A G G ++GA G+D++++VP GT V + + DL ++G R+ +A G Sbjct: 74 YKRRFSASCGLPGEGSLKTGANGDDLIVSVPCGTVVTDAVTGEPLADLVEDGDRVRVAAG 133 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAHF SS +AP ++ G GQE+ + +LKLIAD+ ++GLPNAGKS+ L +++ Sbjct: 134 GKGGKGNAHFASSRRRAPRFSEKGAEGQERDVSFELKLIADVALVGLPNAGKSSLLKALS 193 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PKIA YPFTTL PNLG++ ++ ILAD+PG+I++AH G+G FL+H ERT + Sbjct: 194 DANPKIASYPFTTLSPNLGVLSVDDQKVILADMPGLIEDAHLDKGLGLLFLRHIERTRMN 253 Query: 241 LHIV---SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH++ S + ++ ++ ++DE + Y+ +L ++ +V L+++D +LA Sbjct: 254 LHVIDLSSGTPDELERNWRVVVDEFAHYDPKLPERPFVVVLNKVDLWKG-----TDEQLA 308 Query: 298 TQC------GQVPFEFSSITGHGIPQILE 320 C G F S++TG GIPQ++E Sbjct: 309 GLCAFFSERGLKAFVTSALTGEGIPQLIE 337 >gi|116073765|ref|ZP_01471027.1| GTP1/Obg family GTP-binding protein [Synechococcus sp. RS9916] gi|116069070|gb|EAU74822.1| GTP1/Obg family GTP-binding protein [Synechococcus sp. RS9916] Length = 332 Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 139/321 (43%), Positives = 209/321 (65%), Gaps = 1/321 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A+V +R+G GG G ++FRREK++ GGP GG GG GG+V ++A +NL TL+DF+ Sbjct: 1 MQFIDQARVTVRAGRGGDGIVAFRREKYVPAGGPSGGDGGHGGNVVLEADANLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F A G +G +GA G D+V+ VP GT+V L+ DL G+R+++A G Sbjct: 61 YKRLFPAVDGRRGGPNRCTGACGPDMVIKVPCGTEVRHLSTGILLGDLTDNGERLVVAFG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S+ N+AP G G+E + L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GRGGLGNAHYLSNRNRAPEKCTEGRDGEEWPLQLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ + + ADIPG+I A QGAG+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRRPTGDGTVFADIPGLIAGAAQGAGLGHDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V E+ A + + EL AY L ++ ++ L++++ +D + L Sbjct: 241 LIHMVDGGAEDPVADLRVVEQELQAYGHGLVERPRLLVLNKLELIDEAEREEQVKRLEEA 300 Query: 300 CGQVPFEFSSITGHGIPQILE 320 G+ S+ G G+ Q+L+ Sbjct: 301 SGRPVLLTSAAMGQGLDQLLQ 321 >gi|320449400|ref|YP_004201496.1| Obg family GTPase CgtA [Thermus scotoductus SA-01] gi|320149569|gb|ADW20947.1| Obg family GTPase CgtA [Thermus scotoductus SA-01] Length = 417 Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 136/323 (42%), Positives = 208/323 (64%), Gaps = 6/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + +G GG G ISFRREKF+ GGPDGG GGRGG V+++A ++++L + + Sbjct: 2 FRDVLTITVVAGRGGDGAISFRREKFVPKGGPDGGDGGRGGSVYLRARGSVDSLSEL-SK 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA+ GE G + G G+D+ + VP GT+VF+ D L+ DL +EGQ +++A GG Sbjct: 61 RTYKAEDGEHGKGSGQHGRAGQDLYIEVPRGTRVFDADTGELLGDLTEEGQVLLVAKGGE 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + T QAP +A G G+++ + L+L LIAD+G++G PNAGKS+ L++ TRA Sbjct: 121 GGRGNMHFVTPTRQAPRFAEAGEEGEKRRLRLELMLIADVGLVGYPNAGKSSLLSATTRA 180 Query: 183 KPKIADYPFTTLYPNL---GIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 PKIA YPFTTL P+L + +E + F LADIPGII+ A QG G+G FL+H RT V Sbjct: 181 HPKIAPYPFTTLSPHLGVVEVGEEEGERFTLADIPGIIEGASQGKGLGLEFLRHIARTRV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LL+++ EE ++ ++ + E+ AY+ L ++ ++ L+++D + + + EL +Q Sbjct: 241 LLYVLDVAEEPLK-TFRTLRKEIEAYDPALLRRPGLIALNKVDLLTPKEVEERVAEL-SQ 298 Query: 300 CGQVPFEFSSITGHGIPQILECL 322 G S++TG G+ + E L Sbjct: 299 EGLPVLPVSALTGEGLATLKEAL 321 >gi|317013749|gb|ADU81185.1| GTPase CgtA [Helicobacter pylori Gambia94/24] Length = 360 Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 143/287 (49%), Positives = 194/287 (67%), Gaps = 5/287 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF D + L DL + +R++ GG Sbjct: 62 RHHKAKNGAPGGTRNCAGKKGEDKIIVVPPGTQVFVGDELWL--DLVEPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A +G G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASEGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 ++ A L+ ++ Y+ + EL ++ L K V L++ D V++ Sbjct: 240 FVLDASRLDLGIKEQYKRLRLELEKFSPTLANKPFGVLLNKCDVVEN 286 >gi|268607912|ref|ZP_06141643.1| GTP-binding protein Obg/CgtA [Ruminococcus flavefaciens FD-1] Length = 425 Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 135/337 (40%), Positives = 214/337 (63%), Gaps = 6/337 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK+ I++GDGG G +SF REK++ GGPDGG GGRGGDV Q N +TLIDFRY+ Sbjct: 2 FVDQAKIKIKAGDGGDGAVSFHREKYVAAGGPDGGDGGRGGDVVFQVDDNFSTLIDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ G+ G RN +G +++ VP GT + + ++ D+ + + +LA GG+ Sbjct: 62 RKYVAERGQNGAARNCTGKSAPPLIIKVPRGTVIRDAKSGRIMADMSTDEPK-VLAKGGS 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST Q P +A PG G+E + L+LKL+AD+G++G PN GKST ++ V+ A Sbjct: 121 GGKGNVHFATSTRQIPKFAKPGFPGEEFEVTLELKLLADVGLVGYPNVGKSTLISVVSAA 180 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL P LG+V+ + K F++ADIPG+I+ A G G+G FL+H ER +++ Sbjct: 181 KPKIANYHFTTLTPVLGVVRVDEEKSFVMADIPGLIEGAGDGVGLGHEFLRHVERCRLIV 240 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+ VS +E + ++ I EL+ +N EL ++ +IV ++ D + +A ++ + Sbjct: 241 HVVDVSGIEGRDPCEDFEVINAELAKFNEELAERPQIVAANKADMATEEQIAAFRSYIEG 300 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 + G F S+ T G +++ + + + ++ EF Sbjct: 301 K-GLPFFCISAATTQGTSELMNKVSEVLDTLPPIKEF 336 >gi|307636998|gb|ADN79448.1| GTP binding protein [Helicobacter pylori 908] gi|325995590|gb|ADZ50995.1| GTP-binding protein [Helicobacter pylori 2018] gi|325997186|gb|ADZ49394.1| GTPase [Helicobacter pylori 2017] Length = 360 Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 143/287 (49%), Positives = 193/287 (67%), Gaps = 5/287 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF D + L DL + +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCAGKKGEDRIIVVPPGTQVFVGDELWL--DLVEPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFK +T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKRATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K EF++ADIPGII+ A +G G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASEGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 ++ A L+ ++ YQ + EL ++ L K V L++ D V++ Sbjct: 240 FVLDASRLDLGIKEQYQRLRLELEKFSPALANKPFGVLLNKCDVVEN 286 >gi|296329077|ref|ZP_06871582.1| obg family GTPase CgtA [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153796|gb|EFG94609.1| obg family GTPase CgtA [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 428 Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 144/335 (42%), Positives = 217/335 (64%), Gaps = 6/335 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + +++G+GG G +FRREKF++FGGPDGG GG+GGDV A SN+NTLIDF+++ Sbjct: 2 FIDEVIITVKAGNGGDGSAAFRREKFVQFGGPDGGDGGKGGDVIFVADSNINTLIDFKFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKAQ+GE G K+ G KGED+++ VPVGTQV + LI D+ G++ +L GG Sbjct: 62 KLFKAQNGENGQKKQMYGKKGEDLIIKVPVGTQVRDFTTGKLILDMSVNGEQRVLLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN HFK+S +AP A G G E + L+LKL+AD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGYGNVHFKNSIRKAPKIAEKGGEGAEIKVKLELKLLADVALVGYPSVGKSSFINKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K+ Y FTTL P LG+V+ E K F++ADIPG+I+ AH+G G+GD+FLKH ER ++ Sbjct: 182 NSKVGSYHFTTLEPKLGVVRLEEGKSFVIADIPGLIEGAHEGVGLGDKFLKHIERCKMIY 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 HIV E + ++ I EL ++ +L K +IV +++D + D + + K+ LA Sbjct: 242 HIVDVAEIEGRDCIEDFEKINHELKKFSEKLAGKKQIVIANKMDLIWDMEKFEKFKSYLA 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + ++ + S + G+ +IL +D + I E Sbjct: 302 EKGIEI-YPVSVLLNEGLKEILYKTYDMLSRIERE 335 >gi|19705223|ref|NP_602718.1| GTPase ObgE [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|81590948|sp|Q8RHS8|OBG_FUSNN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|19713174|gb|AAL94017.1| SPO0B-associated GTP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 428 Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 144/335 (42%), Positives = 217/335 (64%), Gaps = 6/335 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + +++G+GG G +FRREKF++FGGPDGG GG+GGDV A SN+NTLIDF+++ Sbjct: 2 FIDEVIITVKAGNGGDGSAAFRREKFVQFGGPDGGDGGKGGDVIFVADSNINTLIDFKFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKAQ+GE G K+ G KGED+++ VPVGTQV + LI D+ G++ +L GG Sbjct: 62 KLFKAQNGENGQKKQMYGKKGEDLIIKVPVGTQVRDFTTGKLILDMSVNGEQRVLLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN HFK+S +AP A G G E + L+LKL+AD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGYGNVHFKNSIRKAPKIAEKGGEGAEIKVKLELKLLADVALVGYPSVGKSSFINKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K+ Y FTTL P LG+V+ E K F++ADIPG+I+ AH+G G+GD+FLKH ER ++ Sbjct: 182 NSKVGSYHFTTLEPKLGVVRLEEGKSFVIADIPGLIEGAHEGVGLGDKFLKHIERCKMIY 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 HIV E + ++ I EL ++ +L K +IV +++D + D + + K+ LA Sbjct: 242 HIVDVAEIEGRDCIEDFEKINHELKKFSEKLAGKKQIVIANKMDLIWDMEKFEKFKSYLA 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + ++ + S + G+ +IL +D + I E Sbjct: 302 EKGIEI-YPVSVLLNEGLKEILYKTYDMLSRIERE 335 >gi|321310942|ref|YP_004193271.1| GTPase obg [Mycoplasma haemofelis str. Langford 1] gi|319802786|emb|CBY93432.1| GTPase obg [Mycoplasma haemofelis str. Langford 1] Length = 421 Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 129/289 (44%), Positives = 180/289 (62%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+ + ++SG GG G I++RRE + GGP GG+GG+GG V+I+A N+N+L R Sbjct: 1 MKFISSTSITLKSGKGGDGIIAWRRESKVRLGGPAGGNGGKGGSVYIEADENVNSLFHLR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + KAQ GE G +++ G GED+ L VP GT VF + +L +R + G Sbjct: 61 HLKVLKAQDGENGRNKSQHGRGGEDLYLKVPCGTNVFNRANNEKLFELISHQERFLACKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FKS N APY G +E + L L+ I+DIG +G PNAGKS+ L+ ++ Sbjct: 121 GEGGRGNASFKSPKNSAPYLYELGDPAEELEVILDLETISDIGFLGKPNAGKSSLLSLIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIA +PFTTL P LG V K+ + ADIPG+I+NA QGAG+G FLKH R VL Sbjct: 181 NAKPKIASFPFTTLIPVLGTVVHEDKKLVFADIPGLIENASQGAGLGFEFLKHLNRCRVL 240 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 +H+V EE+V+ I +E+ AY+ EL K + L++ID + ++L Sbjct: 241 VHLVDCSEEDVENEILSIENEIKAYSEELFNKPRFICLNKIDLISDESL 289 >gi|282891027|ref|ZP_06299532.1| hypothetical protein pah_c045o033 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499020|gb|EFB41334.1| hypothetical protein pah_c045o033 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 336 Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 138/334 (41%), Positives = 207/334 (61%), Gaps = 4/334 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D V I +G GG G I++RREK+I GGP GG+GG GG V ++A L++L FR + Sbjct: 2 FFDRVVVDISAGKGGNGVIAWRREKYIPKGGPCGGNGGNGGSVILEADIQLSSLEWFRNR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KA++G +G R G G+D+VL VP GT V + ++ DL + GQ+++L GG Sbjct: 62 RILKAENGVQGGANCRKGRNGQDLVLKVPCGTLVKDTQTGEVLYDLKENGQKVVLCKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK+ TN+AP G+ G+ I +LKLIAD+G++G PNAGKST ++++T Sbjct: 122 GGRGNDSFKTPTNRAPNICTEGLKGEACEIEFELKLIADVGLVGYPNAGKSTLISTLTYL 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 + KIA YPFTTL+PN+G ++ YK +ADIPGII+NAH+ G+G FL+H ERT +LL Sbjct: 182 RVKIAPYPFTTLHPNIGYIQLPDYKRIFIADIPGIIENAHENRGLGFEFLRHIERTKLLL 241 Query: 242 HIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ A N Y+ + EL AYN EL ++ +V L++ID ++S+ ++ T Sbjct: 242 FVLDASGIDGRNPSDDYRVLRQELEAYNPELLERPFLVILNKIDALESEEHIKQFRSDYT 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 V FE S+ G+ ++ E + +++ S+ E Sbjct: 302 LPSNVLFEISATEKLGLAELKEAIVEQVSSLDSE 335 >gi|317503841|ref|ZP_07961851.1| Spo0B-associated GTP-binding protein [Prevotella salivae DSM 15606] gi|315665037|gb|EFV04694.1| Spo0B-associated GTP-binding protein [Prevotella salivae DSM 15606] Length = 389 Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 139/328 (42%), Positives = 210/328 (64%), Gaps = 5/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + R K+ GGPDGG GG GG ++++ N TL+ +YQ Sbjct: 5 FVDYVKIYCRSGKGGRGSMHLRHVKYQPNGGPDGGDGGHGGSIYLRGNHNYWTLLHLKYQ 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G + G G+D + VP GT V+ D +CD+ +GQ ++L GG Sbjct: 65 RHIYAEHGGNGGRDKCHGTNGKDTYIDVPCGTVVYNADTGKYVCDVTYDGQEVLLLKGGR 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F+S+TNQAP YA PG +E + L+LKL+ADIG++G PNAGKST L++++ A Sbjct: 125 GGLGNFQFRSATNQAPRYAQPGEPMEEMTVILELKLLADIGLVGFPNAGKSTLLSALSSA 184 Query: 183 KPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+YPFTTL P+LGIV +K F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 185 RPKIANYPFTTLEPSLGIVGYRDHKSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 244 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + K+ L Sbjct: 245 FMVPGDTDDIKKEYEVLLNELRQFNPEMLDKHRVLAVTKSDLLDDELIDLLKDTLPQ--- 301 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFS 328 +P F SS+TG G+ ++ + L ++ S Sbjct: 302 DLPVVFISSVTGMGLSELKDVLWKELNS 329 >gi|156345375|ref|XP_001621346.1| hypothetical protein NEMVEDRAFT_v1g63482 [Nematostella vectensis] gi|156207164|gb|EDO29246.1| predicted protein [Nematostella vectensis] Length = 314 Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 131/310 (42%), Positives = 205/310 (66%), Gaps = 9/310 (2%) Query: 25 REKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGE 84 R K+ EFGGPDGG GGRGG V+ A NLNTL+D+R+ + A GE G + GA G Sbjct: 1 RRKYKEFGGPDGGDGGRGGHVYAVADVNLNTLVDYRFSRRHDATRGEHGKGSDMFGAAGN 60 Query: 85 DVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPG 144 D+ L +PVGT + + + ++ +L G+ + +A GG+GG+GN FKS+ N+AP PG Sbjct: 61 DITLRMPVGTIISDAETGEVLYELLTAGEVVTIAKGGDGGYGNLRFKSAINRAPRQKTPG 120 Query: 145 ILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG 204 G+ K + L+LK++AD+G++G+PNAGKSTF+A+V+ A+PKIADYPFTTL+PNLG+V+ Sbjct: 121 WPGERKNLKLELKVLADVGLLGMPNAGKSTFIAAVSNARPKIADYPFTTLHPNLGVVRVA 180 Query: 205 YKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQ--CIL 259 ++ F++ADIPG+I+ A +GAG+G +FL+H +RT +LLH+V + +++V Q I+ Sbjct: 181 AEQSFVVADIPGLIEGASEGAGLGHQFLRHLQRTRLLLHVVDLAPFDDSVDPVAQAKAIV 240 Query: 260 DELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC---GQVPFEFSSITGHGIP 316 EL Y++EL K + L+++D V ++ A + + + G V FE S++T G Sbjct: 241 GELQKYDAELYNKPRWLVLNKLDMVPAEERAARVKDFVKRFKWKGPV-FEISALTREGCE 299 Query: 317 QILECLHDKI 326 ++ ++ + Sbjct: 300 VLIRTIYKHV 309 >gi|299822803|ref|ZP_07054689.1| obg family GTPase CgtA [Listeria grayi DSM 20601] gi|299816332|gb|EFI83570.1| obg family GTPase CgtA [Listeria grayi DSM 20601] Length = 429 Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 137/331 (41%), Positives = 213/331 (64%), Gaps = 11/331 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y++ G+GG G ++FRREKF+ GGP GG GG+G +V L TL+DFRY+ Sbjct: 2 FVDQVKIYVKGGNGGDGMVAFRREKFVPNGGPAGGDGGKGANVVFIVEEGLRTLVDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA HGE GM ++ G +D+V+ VP GT V + D +I DL GQ I+A GG Sbjct: 62 RHFKAHHGEHGMSKSMHGRGADDLVVKVPPGTIVKDIDTGEIIADLVAHGQTAIIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ I L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNKRFATPANPAPELSENGEPGQERNIQLELKVLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA Y FTT+ PNLG+V + F++AD+PG+I+ A QG G+G +FL+H ERT V++ Sbjct: 182 RPKIAAYHFTTIVPNLGMVDTHDGRSFVMADLPGLIEGASQGVGLGHQFLRHIERTRVIV 241 Query: 242 HIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 H++ S E ++ ++ I EL YN L ++ +I+ +++D ++ + L + + E+ Sbjct: 242 HVIDMSGSEGREPIE-DFKAINQELETYNLRLMERPQIIVANKMDMPEAEENLEKFRKEI 300 Query: 297 ATQCGQVP-FEFSSITGHGIPQILECLHDKI 326 G+ P F S++T G+ +++ + DK+ Sbjct: 301 P---GEYPIFPISAVTQTGLKELILAIADKL 328 >gi|163750051|ref|ZP_02157294.1| GTP-binding protein, GTP1/Obg family [Shewanella benthica KT99] gi|161330108|gb|EDQ01090.1| GTP-binding protein, GTP1/Obg family [Shewanella benthica KT99] Length = 396 Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 137/287 (47%), Positives = 203/287 (70%), Gaps = 6/287 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG+G +SFRREK++ GGPDGG GG GGDV++QA + NTLIDF+ Sbjct: 7 MKFVDEAVIRVEAGDGGSGCVSFRREKYVPDGGPDGGDGGDGGDVYLQADESFNTLIDFQ 66 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ +A+ G+ G RN +G GED++L VPVGT+ +E+ + DL G+++++A G Sbjct: 67 FERFHRAERGKNGRGRNCTGHGGEDLILQVPVGTRAIDEETQESLGDLTAHGKKMLVAKG 126 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 127 GFHGLGNTRFKSSTNRAPRQKTLGTPGEVRSLKLELLLLADVGLLGMPNAGKSTFIRSVS 186 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +A PK+ADYPFTTL PNLG+V + + F++ADIPG+I+ A GAG+G RFLKH ER V Sbjct: 187 KATPKVADYPFTTLVPNLGVVNPRHGQSFVIADIPGLIEGAADGAGLGVRFLKHLERCRV 246 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 LLH++ + V++A + I+ EL ++ +L K + +++ID Sbjct: 247 LLHLIDIEPIDGSDPVESA-RAIVGELKKHSPKLAAKPRWLVINKID 292 >gi|319400970|gb|EFV89189.1| GTP-binding protein Obg/CgtA [Staphylococcus epidermidis FRI909] Length = 430 Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 138/333 (41%), Positives = 209/333 (62%), Gaps = 7/333 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVIFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE G N G ED+VL VP GT + + ++ DL ++GQR I+A GG Sbjct: 62 RHFKAKKGENGQSSNMHGKNAEDLVLKVPPGTIIKSVESEEVLADLVEDGQRAIVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSENGEPGEELEVTLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V ++ F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDHRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKKNELA 297 H++ S E + Y+ I EL Y L + +I+ +++D +S L+ K +L Sbjct: 242 HMIDMSGSEGRDPLDDYKIINQELINYKQRLEDRPQIIVANKMDLPNSQGNLSLFKEQLD 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 VP S+IT I Q+L + DK+ ++ Sbjct: 302 NDVTVVP--VSTITRDNIDQLLYQIADKLEEVK 332 >gi|229829086|ref|ZP_04455155.1| hypothetical protein GCWU000342_01171 [Shuttleworthia satelles DSM 14600] gi|229792249|gb|EEP28363.1| hypothetical protein GCWU000342_01171 [Shuttleworthia satelles DSM 14600] Length = 449 Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 147/343 (42%), Positives = 222/343 (64%), Gaps = 16/343 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F D AK++I SG GG G +SFRREKF+ GGPDGG GG+GGDV + +NTL ++R Sbjct: 21 IMFADRAKIWIVSGKGGDGHVSFRREKFVPDGGPDGGDGGKGGDVIFEVDDGMNTLYNYR 80 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ F A +GE+G KR G G+D+VL VP GT V + +I D+ + +R+++ G Sbjct: 81 HRHKFAAGNGEEGGKRRCHGRNGQDIVLKVPEGTIVKSAETGQVIADMSGDNRRMVVLRG 140 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 GNGG GN HF +ST QAP +A PG E + L+LK+IAD+G++G PN GKSTFL+ T Sbjct: 141 GNGGLGNMHFATSTMQAPKFAKPGQNAVEIEVILELKVIADVGLVGFPNVGKSTFLSRAT 200 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+Y FTTL PNLG+V EG F++ADIPG+I+ A +G G+G +FL+H ERT + Sbjct: 201 NARPKIANYHFTTLNPNLGVVDLEGASGFVIADIPGLIEGASEGLGLGHQFLRHIERTKL 260 Query: 240 LLHIVSALE-------ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD---SDTL 289 ++H+V A E+++A I EL +Y+S+L KK +I+ +++D + L Sbjct: 261 IVHLVDAASVEGRDPIEDIRA----INHELESYHSKLLKKPQIIAANKLDLCPDGGEEVL 316 Query: 290 ARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 R + +++ +V + S++TG G+ ++L + + + S+ E Sbjct: 317 TRLREAFSSEGIEV-YGISAVTGRGVKELLYRVSELLSSLPKE 358 >gi|254520213|ref|ZP_05132269.1| spo0B-associated GTP-binding protein [Clostridium sp. 7_2_43FAA] gi|226913962|gb|EEH99163.1| spo0B-associated GTP-binding protein [Clostridium sp. 7_2_43FAA] Length = 429 Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 141/326 (43%), Positives = 213/326 (65%), Gaps = 11/326 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK++++SGDGG G +SFRREK++ GGPDGG GG+GG V + L TL+DF+Y+ Sbjct: 2 FIDKAKIFVKSGDGGNGCVSFRREKYVPLGGPDGGDGGKGGSVIFEVDPGLTTLLDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A+ G KG G G+D+ + VP+GT + + + +I DL + ++A GG Sbjct: 62 KKFVAEAGGKGEGSKCYGKDGDDLHVKVPMGTIIRDFETNKIIADLSHKDDTFVIAKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + T QAP++A PG+ G+++ I L+LKL+AD+G++G PN GKSTFL++VT A Sbjct: 122 GGKGNCKFCTPTRQAPHFAEPGMPGEDRWITLELKLLADVGLVGFPNVGKSTFLSTVTAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+VK EG F++ADIPGII+ A +G G+G FL+H ERT +L+ Sbjct: 182 KPKIANYHFTTLKPNLGVVKAEGMNAFVMADIPGIIEGAAEGVGLGLDFLRHIERTRLLI 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL----ARKKN 294 H+V S +E + + I +EL Y+ +L + +IV ++ D + + + +K N Sbjct: 242 HVVDISGIEGRDAFEDFVKINEELKKYSVKLWDRPQIVVANKTDMLYDEEIFEDFKKKVN 301 Query: 295 ELATQCGQVPFEFSSITGHGIPQILE 320 EL ++ S+ T G+ I++ Sbjct: 302 ELGFDK---VYKMSAATKSGVEDIIK 324 >gi|309775416|ref|ZP_07670419.1| Obg family GTPase CgtA [Erysipelotrichaceae bacterium 3_1_53] gi|308916805|gb|EFP62542.1| Obg family GTPase CgtA [Erysipelotrichaceae bacterium 3_1_53] Length = 429 Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 130/321 (40%), Positives = 202/321 (62%), Gaps = 6/321 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D KV++++G GG G ++FRREK++ +GGP GG GG GGDV TL+D RY Sbjct: 2 FIDRVKVHVKAGKGGDGIVAFRREKYVAYGGPSGGDGGAGGDVVFMVDEGKTTLLDLRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + A+ G KG + GA G D V+ VP GT V +E ++ DL ++GQ+ I+A GG Sbjct: 62 RKMAAEPGGKGKTKKMHGADGADCVIKVPQGTIVKDEKTGRILADLTRKGQKEIIAKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSS N AP Y+ G G+E+ I ++LK++AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNFHFKSSKNTAPQYSELGAPGEERDIMVELKVLADVGLVGFPSVGKSTLLSVVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL PNLG+V+ + F++AD+PG+I+ A G G+G +FL+H ER V++ Sbjct: 182 KPEIAEYHFTTLAPNLGMVQVPDGRSFVMADLPGLIEGASDGKGLGHQFLRHIERCRVII 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V + + ++ I DEL+ Y L ++ +IV +++D ++ ++ E Sbjct: 242 HVVDMGANDGRDPVEDFRIINDELAHYEYRLMERPQIVLANKMDLDNAQENLKRFKEAYP 301 Query: 299 QCGQVPFEFSSITGHGIPQIL 319 + FE ++I G+ +L Sbjct: 302 EVEV--FETTTIIAEGLEPVL 320 >gi|224476741|ref|YP_002634347.1| GTPase ObgE [Staphylococcus carnosus subsp. carnosus TM300] gi|261263100|sp|B9DNE7|OBG_STACT RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|222421348|emb|CAL28162.1| Spo0B-associated GTP-binding protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 430 Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 207/329 (62%), Gaps = 7/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GGRG V + L TL+DFRYQ Sbjct: 2 FVDQVKILLKAGDGGNGITAYRREKYVPFGGPAGGDGGRGASVIFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GE G N G ED+VL VP GT + + + ++ DL + GQR ++A GG Sbjct: 62 RQFKAKRGEGGQGSNMHGKNAEDLVLKVPPGTLIKDAETEEVLADLVEAGQRAVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSENGEPGEEIEVTLELKLLADVGLVGFPSVGKSTLLSVVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + F+LAD+PG+I+ A +G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDGRSFVLADLPGLIEGASEGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S E + Y+ I EL +Y L + +IV +++D +D+ D L K E+ Sbjct: 242 HVIDMSGSEGRDPLEDYKTINKELESYGQHLEDRPQIVVANKMDLLDAEDNLELFKEEVG 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI 326 +P S+ T I Q+L + DK+ Sbjct: 302 DDVEIIP--ISAYTKENIDQLLYAIADKL 328 >gi|302792068|ref|XP_002977800.1| hypothetical protein SELMODRAFT_107842 [Selaginella moellendorffii] gi|300154503|gb|EFJ21138.1| hypothetical protein SELMODRAFT_107842 [Selaginella moellendorffii] Length = 424 Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 127/288 (44%), Positives = 193/288 (67%), Gaps = 2/288 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+ D AK+Y+++GDGG G ++FRREK+I GGP GG+GGRGG+++I+ +LN+L+ FR Sbjct: 1 MRCFDRAKIYVKAGDGGNGEVAFRREKYIPHGGPSGGNGGRGGNIYIEVDPSLNSLLCFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE-EDGISLICDLDQEGQRIILAP 119 HF+A G G+ +++ GA G+D V+ VP GT V + ++ +L+ ++ + G R +L P Sbjct: 61 KSVHFRAGRGSHGLGKSQDGAFGDDCVVKVPPGTVVRDAKNSETLLLEMTKAGHRELLLP 120 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG GNA FKS+ N+ P A G G E + L+LKL+AD+GIIG+PNAGKST L+++ Sbjct: 121 GGRGGRGNAAFKSAKNKTPQLAERGEQGAEMWVDLELKLVADVGIIGVPNAGKSTLLSAI 180 Query: 180 TRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 + A+P IA YPFTTL PNLG+V + ++AD+PG+++ AH G G+G FL+HTER Sbjct: 181 SAARPAIAAYPFTTLLPNLGVVSLDFDATMVIADLPGLLEGAHAGYGLGHEFLRHTERCR 240 Query: 239 VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 VL+H++ + Y + EL ++ L K IV +++D ++ Sbjct: 241 VLIHVIDGTSPQPEFEYDAVRLELELFDPRLCSKPSIVAFNKMDVPEA 288 >gi|159902780|ref|YP_001550124.1| GTPase ObgE [Prochlorococcus marinus str. MIT 9211] gi|261277676|sp|A9BDI4|OBG_PROM4 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|159887956|gb|ABX08170.1| GTP1/OBG family [Prochlorococcus marinus str. MIT 9211] Length = 329 Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 134/327 (40%), Positives = 211/327 (64%), Gaps = 1/327 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A + +++G GG G ++FRREK++ GGP GG GG+GG++ +QA SNL TL+DF+ Sbjct: 1 MQFIDQACISVKAGRGGDGIVAFRREKYVPAGGPSGGDGGKGGEIVLQADSNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ AQ G +G SGA G+D+VL VP GTQV + ++ DL G+ +++A G Sbjct: 61 FKKFIVAQDGRRGGPNKCSGASGKDLVLKVPCGTQVRHQTTGIILGDLKHHGEILVVAYG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S++N+AP G G++ ++ L+LKL+A++GIIGLPNAGKST ++ V+ Sbjct: 121 GKGGLGNAHYLSNSNRAPEKCTEGKEGEQWLLHLELKLLAEVGIIGLPNAGKSTLMSVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V++ + + ADIPG+I+ A G G+G FL+H ERT + Sbjct: 181 SARPKIADYPFTTLIPNLGVVRKPTGDGTVFADIPGLIEGAAAGVGLGHEFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V A I EL AY L + ++ ++ + ++ L + + E Sbjct: 241 LIHLVDAAAARPIEDIAIIEKELFAYGHSLMNRPRVLVFNKKELLNEQCLQKLQAEARAF 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKI 326 + S+ T G+ ++L+ + +K+ Sbjct: 301 TNRDIIFISAATSEGLDELLKNVWEKL 327 >gi|238897583|ref|YP_002923262.1| GTP-binding protein associated with DNA replication of some extrachromosomal elements [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465340|gb|ACQ67114.1| GTP-binding protein associated with DNA replication of some extrachromosomal elements [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 362 Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 140/294 (47%), Positives = 201/294 (68%), Gaps = 12/294 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + SGDGG G +SFRREK+I +GGP+GG GG GG V++ N+NTLID+R Sbjct: 1 MKFVDEASIQVESGDGGNGCVSFRREKYIPYGGPNGGDGGDGGHVYLITDENINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F+A+ G G + +G +G+D+ L VPVGT+V + ++ D+ + Q++++A G Sbjct: 61 FVRIFRAESGHNGQSCDCTGKRGQDITLKVPVGTRVLDCATGEILADMVRREQKVMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G LG+++ + L+L L+AD+G++GLPNAGKSTF+ S++ Sbjct: 121 GFHGLGNTRFKSSINRAPRQRTLGSLGEKRDLTLELLLLADVGLLGLPNAGKSTFVRSIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ E F++ADIPG+IK A QGAG+G FLKH ER V Sbjct: 181 SAKPKVADYPFTTLIPSLGVVRVDQAESFVVADIPGLIKGAAQGAGLGIHFLKHLERCQV 240 Query: 240 LLHIV-------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 LLH+V S ENV+ I++EL YN+ L +K + ++ D + S Sbjct: 241 LLHLVDIVPIDGSDPAENVKM----IVNELEQYNTNLAEKPRWLVFNKADVLCS 290 >gi|237741405|ref|ZP_04571886.1| SPO0B-associated GTP-binding protein [Fusobacterium sp. 4_1_13] gi|294784164|ref|ZP_06749465.1| Obg family GTPase CgtA [Fusobacterium sp. 3_1_27] gi|229430937|gb|EEO41149.1| SPO0B-associated GTP-binding protein [Fusobacterium sp. 4_1_13] gi|294488234|gb|EFG35579.1| Obg family GTPase CgtA [Fusobacterium sp. 3_1_27] Length = 428 Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 144/335 (42%), Positives = 217/335 (64%), Gaps = 6/335 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + +++G+GG G +FRREKF++FGGPDGG GG+GGDV A SN+NTLIDF+++ Sbjct: 2 FIDEVIITVKAGNGGDGSAAFRREKFVQFGGPDGGDGGKGGDVVFTADSNINTLIDFKFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKAQ+GE G K+ G KGED+++ VPVGTQV + LI D+ G++ +L GG Sbjct: 62 KLFKAQNGENGQKKQMYGKKGEDLIIKVPVGTQVKDFTTGKLILDMSVNGEQRVLLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN HFK+S +AP A G G E + L+LKL+AD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGYGNVHFKNSIRKAPKIAEKGGEGAEIKVKLELKLLADVALVGYPSVGKSSFINKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K+ Y FTTL P LG+V+ E K F++ADIPG+I+ AH+G G+GD+FLKH ER ++ Sbjct: 182 NSKVGSYHFTTLEPKLGVVRLEEGKSFVIADIPGLIEGAHEGVGLGDKFLKHIERCKMIY 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 HIV A E + ++ I EL ++ +L K +IV +++D + D + K+ LA Sbjct: 242 HIVDAAEIEGRDCIEDFEKINYELKKFSEKLASKKQIVIANKMDLIWDMGKYNKFKDYLA 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + ++ + S + G+ ++L +D + I E Sbjct: 302 EKGIEI-YPVSVLLNEGLKEVLYKTYDMLSHIERE 335 >gi|261367586|ref|ZP_05980469.1| Obg family GTPase CgtA [Subdoligranulum variabile DSM 15176] gi|282570372|gb|EFB75907.1| Obg family GTPase CgtA [Subdoligranulum variabile DSM 15176] Length = 427 Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 135/328 (41%), Positives = 214/328 (65%), Gaps = 6/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A +++ +G GG G ++F REKF+ GGPDGG GGRGGD+ A NL+TL+DFRY+ Sbjct: 6 FIDTATIWLHAGKGGDGAVTFHREKFVAAGGPDGGDGGRGGDIIFVADDNLSTLMDFRYK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + AQ GE G + +SGA +D+V+ VP GT + E + +I DL + +++A GG Sbjct: 66 RKYTAQDGENGRAKRQSGADADDLVIRVPRGTVLKEAETGLVIADLSG-SEPVVVARGGR 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN+HF + T Q P +A PG+ G++ + L+LK+IAD+G+IG PN GKST ++ ++ A Sbjct: 125 GGWGNSHFATPTRQIPKFAKPGLPGEDLHVQLELKVIADVGLIGFPNVGKSTLISIISAA 184 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL P LG+V+ G ++ F+ ADIPG+I+ A +G G+G FL+H ER +LL Sbjct: 185 KPKIANYHFTTLTPVLGVVRVGPEQSFVCADIPGLIEGAAEGVGLGHDFLRHVERCRLLL 244 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+ VS E + +A ++ I EL+ +++EL ++ +IV ++ D + + K + Sbjct: 245 HVVDVSGCEGRDPKADFEQINHELAGFSAELAQRPQIVLGNKCDIATPEQVEEFKQYIEA 304 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKI 326 Q G S+ T G+ + +++++ Sbjct: 305 Q-GLTFLPISAATRQGVDGLPALVYNRL 331 >gi|289450752|ref|YP_003475012.1| Obg family GTPase CgtA [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185299|gb|ADC91724.1| Obg family GTPase CgtA [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 422 Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 130/283 (45%), Positives = 186/283 (65%), Gaps = 3/283 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK++++SG GG G +SF K++ GGPDGG GG GG V A +NL+TL DFRY+ Sbjct: 2 FIDYAKIFLKSGKGGDGRVSFHTAKYVPNGGPDGGDGGDGGSVIFVADANLSTLQDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ GE G +RN++G G D+ + VPVGT + + L+ D G+ +++A GG Sbjct: 62 RKYMAEDGEMGGRRNKTGKNGADLYVKVPVGTIIKDAQTGRLLADFTANGEEVVIAEGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + QAP +A G E + ++LKL+ADIG+IG+PN GKST L+ V+ A Sbjct: 122 GGKGNVRFANPVRQAPNFARAGEAATEMEVIIELKLLADIGLIGMPNVGKSTLLSVVSEA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +P IADY FTTL PNLGI G K F +ADIPG+I+ A G G+G FL+H ERT +LLH Sbjct: 182 RPAIADYHFTTLEPNLGICTVGEKHFAIADIPGLIEGASDGLGLGHNFLRHIERTRLLLH 241 Query: 243 I--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 + VS E + ++ I +EL+ ++S+L K+ ++V S+ID Sbjct: 242 LVDVSGSEGRDPLDDFKQINNELAKFDSDLAKRHQLVVASKID 284 >gi|332363100|gb|EGJ40887.1| Spo0B-associated GTP-binding protein [Streptococcus sanguinis SK355] Length = 436 Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 144/329 (43%), Positives = 209/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIQVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVIFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKAQSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETGKVLTDLVENGQEFIVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELLLELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTHSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D DS + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPDSAENLKIFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + +P F SS+T G+ +L+ Sbjct: 304 ANYDEFADLPQIFPISSLTKQGLATLLDA 332 >gi|302814423|ref|XP_002988895.1| hypothetical protein SELMODRAFT_128934 [Selaginella moellendorffii] gi|300143232|gb|EFJ09924.1| hypothetical protein SELMODRAFT_128934 [Selaginella moellendorffii] Length = 424 Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 127/288 (44%), Positives = 193/288 (67%), Gaps = 2/288 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+ D AK+Y+++GDGG G ++FRREK+I GGP GG+GGRGG+++I+ +LN+L+ FR Sbjct: 1 MRCFDRAKIYVKAGDGGNGEVAFRREKYIPHGGPSGGNGGRGGNIYIEVDPSLNSLLCFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE-EDGISLICDLDQEGQRIILAP 119 HF+A G G+ +++ GA G+D V+ VP GT V + ++ +L+ ++ + G R +L P Sbjct: 61 KSVHFRAGRGSHGLGKSQDGAFGDDCVVKVPPGTVVRDAKNSETLLLEMTKAGHRELLLP 120 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG GNA FKS+ N+ P A G G E + L+LKL+AD+GIIG+PNAGKST L+++ Sbjct: 121 GGRGGRGNAAFKSAKNKTPQLAERGEQGAEMWVDLELKLVADVGIIGVPNAGKSTLLSAI 180 Query: 180 TRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 + A+P IA YPFTTL PNLG+V + ++AD+PG+++ AH G G+G FL+HTER Sbjct: 181 SAARPAIAAYPFTTLLPNLGVVSLDFDATMVIADLPGLLEGAHAGYGLGHEFLRHTERCR 240 Query: 239 VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 VL+H++ + Y + EL ++ L K IV +++D ++ Sbjct: 241 VLIHVIDGTSPQPEFEYDAVRLELELFDPRLCSKPSIVAFNKMDVPEA 288 >gi|313891930|ref|ZP_07825531.1| Obg family GTPase CgtA [Dialister microaerophilus UPII 345-E] gi|313119573|gb|EFR42764.1| Obg family GTPase CgtA [Dialister microaerophilus UPII 345-E] Length = 431 Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 136/327 (41%), Positives = 216/327 (66%), Gaps = 10/327 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A++++ SG GG G +SFRREK++ GGP GG GG+GG V ++ATSN+NTL+ FR + Sbjct: 2 FIDRARIFVVSGAGGDGMVSFRREKYVPRGGPSGGDGGKGGSVILRATSNINTLMAFRRR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A+ GE+G ++ G G+D ++ VP+GT V++ L+ D+ EGQ ILA GG Sbjct: 62 KKFVAERGERGGPKDMFGKMGKDCIIEVPLGTVVYDAKTNELLADMTNEGQEAILAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+HF +S +AP +A G G+EK + L+LK++AD+G++G P+ GKS+ + V+ A Sbjct: 122 GGRGNSHFATSAVRAPMFAEKGEPGEEKELKLELKVLADVGLLGFPSVGKSSLIRKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P++A Y FTTL P LG+V + + F++ADIPG+I+ A G+G+GD+FLKH ERT +L+ Sbjct: 182 RPEVAAYHFTTLTPVLGLVSLDESRNFVMADIPGLIEGASNGSGLGDQFLKHIERTKLLI 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ A + + I EL+ Y+S L KK +IV ++ D + + +K ++L + Sbjct: 242 HVLDAAGSEGRDPFDDFHIINKELAMYSSVLTKKKQIVAANKTDLIQDN---KKLDDLCS 298 Query: 299 QC---GQVPFEFSSITGHGIPQILECL 322 + G F ++TG GI +++E + Sbjct: 299 KIKAEGYDIFPICTLTGEGISELMEAV 325 >gi|254779006|ref|YP_003057111.1| GTPase ObgE [Helicobacter pylori B38] gi|254000917|emb|CAX28853.1| Putative GTP-binding protein, GTP1/Obg family [Helicobacter pylori B38] Length = 360 Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 145/293 (49%), Positives = 196/293 (66%), Gaps = 6/293 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF D + L DL +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCAGKKGEDKIIVVPPGTQVFVGDELWL--DLITPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V K F++ADIPGII+ A QG G+G FLKH ERT VL Sbjct: 180 KPKIANYEFTTLVPNLGVVSVDEKSGFLMADIPGIIEGASQGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLAR 291 ++ A L+ ++ Y+ + EL ++ L K V L++ D V++ D +A+ Sbjct: 240 FVLDASRLDLGIKEQYKRLRLELEKFSPALANKPFGVLLNKCDVVENIDEMAK 292 >gi|324990519|gb|EGC22455.1| Spo0B-associated GTP-binding protein [Streptococcus sanguinis SK353] Length = 436 Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 143/329 (43%), Positives = 210/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIQVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKAQSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETGKVLTDLVENGQEFIVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELLLELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTHSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D D S+ L K +L+ Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPDSSENLKIFKEKLS 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+T G+ +L+ Sbjct: 304 ANYDEFAELPQIFPISSLTKQGLATLLDA 332 >gi|323352429|ref|ZP_08087564.1| Spo0B-associated GTP-binding protein [Streptococcus sanguinis VMC66] gi|322121861|gb|EFX93602.1| Spo0B-associated GTP-binding protein [Streptococcus sanguinis VMC66] gi|327468873|gb|EGF14345.1| Spo0B-associated GTP-binding protein [Streptococcus sanguinis SK330] Length = 436 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 143/329 (43%), Positives = 210/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIQVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKAQSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETGKVLTDLVENGQEFIVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELLLELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTHSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D DS + L K +L+ Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPDSAENLKIFKEKLS 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+T G+ +L+ Sbjct: 304 ANYDEFAELPQIFPISSLTKQGLATLLDA 332 >gi|317495764|ref|ZP_07954127.1| obg family GTPase CgtA [Gemella moribillum M424] gi|316913941|gb|EFV35424.1| obg family GTPase CgtA [Gemella moribillum M424] Length = 434 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 140/328 (42%), Positives = 208/328 (63%), Gaps = 6/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLDE K+++RSGDGG G ++FRREK++ GGP GG GGRG +V L T +D+RYQ Sbjct: 2 FLDEVKIFVRSGDGGNGLVAFRREKYVPKGGPAGGDGGRGANVVFIVDEGLRTFMDYRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A +GE GM + G K +D+ L VP GT + + D ++ DL + Q +I+A GG Sbjct: 62 KKFVAPNGENGMSKGMHGRKSKDLYLKVPPGTVIRDTDTGEVLADLVEHEQEVIVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + +N AP A G G+E+ + L+LKL+AD+G++G P+ GKST L+ ++A Sbjct: 122 GGRGNCRFATPSNPAPEIAENGEPGEERNLTLELKLMADVGLVGFPSVGKSTLLSITSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+V+ + ++ F++AD+PG+I+ A QG G+G +FL+H ERT V++ Sbjct: 182 KPKIADYHFTTLAPNLGVVETKDHRSFVMADLPGLIEGASQGVGLGHQFLRHIERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT-VDSDTLARKKNELA 297 H+V SA + + Y+ I EL YN L ++ +IV +++D + L K +LA Sbjct: 242 HVVDMSATDGRDPYEDYKIINQELGEYNMRLLERPQIVVANKMDIPAAQENLEEFKAKLA 301 Query: 298 TQCGQVPF-EFSSITGHGIPQILECLHD 324 +V E S+ T + +L + D Sbjct: 302 ADGEEVDIVEISAFTRTNVDNLLYKISD 329 >gi|300728410|ref|ZP_07061772.1| GTP-binding protein Obg/CgtA [Prevotella bryantii B14] gi|299774329|gb|EFI70959.1| GTP-binding protein Obg/CgtA [Prevotella bryantii B14] Length = 386 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 140/322 (43%), Positives = 207/322 (64%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + R K+ GGPDGG GGRGG + ++ N TL+ +YQ Sbjct: 6 FVDYVKIYCRSGKGGRGSMHLRHVKYQPNGGPDGGDGGRGGSIILRGNHNYWTLLHLKYQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA+HG G + G G+D+ + VP GT V+ + ICD+ +GQ ++L GG Sbjct: 66 RHIKAEHGGNGGRDKCHGTDGKDMYIDVPCGTVVYNAETGKYICDVTYDGQEVVLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F++STNQAP YA PG QE + ++LKL+AD+G++G PNAGKST L+S++ A Sbjct: 126 GGLGNFQFRTSTNQAPRYAQPGEPAQELNVIMELKLLADVGLVGFPNAGKSTLLSSLSSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+YPFTTL P+LGIV +K F++ADIPGII+ A G G+G RFL+H ER +LL Sbjct: 186 RPKIANYPFTTLEPSLGIVSYHDHKSFVMADIPGIIEGASGGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + K L Sbjct: 246 FMVPGDTDDIKKEYEILLNELKTFNPEMLDKHRVLAVTKCDLLDEELMEMLKTTLP---D 302 Query: 302 QVPFEF-SSITGHGIPQILECL 322 +P F SS+TG G+ ++ + L Sbjct: 303 DLPVVFISSVTGLGLNELKDVL 324 >gi|329120971|ref|ZP_08249602.1| Spo0B-associated GTP-binding protein [Dialister micraerophilus DSM 19965] gi|327471133|gb|EGF16587.1| Spo0B-associated GTP-binding protein [Dialister micraerophilus DSM 19965] Length = 436 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 136/327 (41%), Positives = 216/327 (66%), Gaps = 10/327 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A++++ SG GG G +SFRREK++ GGP GG GG+GG V ++ATSN+NTL+ FR + Sbjct: 7 FIDRARIFVVSGAGGDGMVSFRREKYVPRGGPSGGDGGKGGSVILRATSNINTLMAFRRR 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A+ GE+G ++ G G+D ++ VP+GT V++ L+ D+ EGQ ILA GG Sbjct: 67 KKFVAERGERGGPKDMFGKMGKDCIIEVPLGTVVYDVKTNELLADMTNEGQEAILAKGGR 126 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+HF +S +AP +A G G+EK + L+LK++AD+G++G P+ GKS+ + V+ A Sbjct: 127 GGRGNSHFATSAVRAPMFAEKGEPGEEKELKLELKVLADVGLLGFPSVGKSSLIRKVSAA 186 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P++A Y FTTL P LG+V + + F++ADIPG+I+ A G+G+GD+FLKH ERT +L+ Sbjct: 187 RPEVAAYHFTTLTPVLGLVSLDESRNFVMADIPGLIEGASNGSGLGDQFLKHIERTKLLI 246 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ A + + I EL+ Y+S L KK +IV ++ D + + +K ++L + Sbjct: 247 HVLDAAGSEGRDPFDDFHIINKELAMYSSVLTKKKQIVAANKTDLIQDN---KKLDDLCS 303 Query: 299 QC---GQVPFEFSSITGHGIPQILECL 322 + G F ++TG GI +++E + Sbjct: 304 KIKAEGYDIFPICTLTGEGISELMEAV 330 >gi|188585171|ref|YP_001916716.1| GTP-binding protein Obg/CgtA [Natranaerobius thermophilus JW/NM-WN-LF] gi|261277699|sp|B2A6B7|OBG_NATTJ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|179349858|gb|ACB84128.1| GTP-binding protein Obg/CgtA [Natranaerobius thermophilus JW/NM-WN-LF] Length = 452 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 138/336 (41%), Positives = 213/336 (63%), Gaps = 12/336 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+Y++ GDGG G ++FRREK++ GGP GG GG+GG+V ++ L +L+D++Y Sbjct: 2 FIDRAKIYVKGGDGGNGIVAFRREKYVPDGGPSGGDGGKGGNVILEVDPGLKSLMDYKYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H K + GE G N+ G G+D V+ VP GT V E ++ DL E I A GG Sbjct: 62 IHIKGKRGEHGQGSNQHGKSGQDKVIKVPPGTVVKEATSGKVLADLVHEHDSYIAAEGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N+AP ++ G G+EK I L+LK++A++G+IG PN GKST L+ VT+A Sbjct: 122 GGRGNTRFANPKNKAPRFSEDGKPGEEKWIVLELKVMAEVGLIGYPNVGKSTLLSQVTKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 PKI Y FTTL PNLG+V+ E F++ADIPG+I+ AHQG G+GD+FL+H ERT +L+ Sbjct: 182 SPKIDSYHFTTLNPNLGVVELEEGSRFVMADIPGLIEGAHQGRGLGDQFLRHIERTKMLI 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD--SDTLARKKNEL 296 H+ ++++E + + I +EL YNS + K +++ +++D D + L R +++ Sbjct: 242 HVIDIASIEGRDPVLDIETINEELKGYNSRVMDKPQVIAANKMDLGDQAEENLQRLLDKV 301 Query: 297 ATQCGQVP------FEFSSITGHGIPQILECLHDKI 326 + +P F S+ TG G+ ++L+ + +K+ Sbjct: 302 NSDEILIPEQYKKIFPISAATGEGLRELLDFVAEKV 337 >gi|323486892|ref|ZP_08092208.1| hypothetical protein HMPREF9474_03959 [Clostridium symbiosum WAL-14163] gi|323691936|ref|ZP_08106186.1| obg family GTPase CgtA [Clostridium symbiosum WAL-14673] gi|323399755|gb|EGA92137.1| hypothetical protein HMPREF9474_03959 [Clostridium symbiosum WAL-14163] gi|323503994|gb|EGB19806.1| obg family GTPase CgtA [Clostridium symbiosum WAL-14673] Length = 427 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 142/325 (43%), Positives = 209/325 (64%), Gaps = 9/325 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AKV+I+SG GG G +SFRRE ++ GGPDGG GGRGGD+ + LNTL DFR+ Sbjct: 2 FADSAKVFIKSGKGGDGHVSFRRELYVAAGGPDGGDGGRGGDIIFEVDDGLNTLTDFRHV 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ GE+G K+ GA G+D+V+ VP GT + + + +I D+ + +R ++ GG Sbjct: 62 RKYVAEDGEQGGKKRCHGANGKDLVIKVPEGTVIKDFESGKVIADMSGDNRREVILKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF ++T Q P YA PG QE I ++LK+IAD+G++G PN GKST L+ V+ A Sbjct: 122 GGLGNMHFATATMQVPKYAQPGQPAQELWIQMELKVIADVGLVGFPNVGKSTLLSRVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL P+LG+V + F++ADIPG+I+ A QG G+G FLKH ERT VL+ Sbjct: 182 RPKIANYHFTTLNPHLGVVDLNDGQGFVMADIPGLIEGASQGIGLGYSFLKHIERTKVLV 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV----DSDTLARKKN 294 H+V A + A + I EL +YN EL + +++ ++ D + + D + R + Sbjct: 242 HVVDAASTEGRDPVADIRAINAELESYNPELLTRPQVIAANKTDAIYAGEEIDPIERLRE 301 Query: 295 ELATQCGQVPFEFSSITGHGIPQIL 319 E + +V F S++TG G+ ++L Sbjct: 302 EFEPEGIKV-FPISAVTGKGVKELL 325 >gi|225025979|ref|ZP_03715171.1| hypothetical protein EUBHAL_00216 [Eubacterium hallii DSM 3353] gi|224956765|gb|EEG37974.1| hypothetical protein EUBHAL_00216 [Eubacterium hallii DSM 3353] Length = 429 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 143/334 (42%), Positives = 214/334 (64%), Gaps = 17/334 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D A+++IRSG GG G +SFRRE ++ GGPDGG GG+GGD+ LNTL+D+R++ Sbjct: 2 FADRARIFIRSGKGGDGHVSFRRELYVPDGGPDGGDGGKGGDLIFVVDPGLNTLVDYRHK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A G++G K+ +GA GED++L VP GT V + + +I D+ + ++L GG Sbjct: 62 RKYCAGDGKEGSKKRCTGASGEDMILKVPAGTVVKDAETGKVILDMANRTEPVVLLKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN H+ ++T QAP YA PG +E + L+LK+IAD+G+IG PN GKST L+ VT A Sbjct: 122 GGKGNQHYATATMQAPKYAQPGQRARELWVDLELKVIADVGLIGFPNVGKSTLLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PKIA+Y FTTL PNLG+V EG F++ADIPGII+ A +G G+G +FL+H ERT V+ Sbjct: 182 RPKIANYHFTTLNPNLGVVDLAEG-NGFVIADIPGIIEGASEGVGLGYQFLRHIERTKVM 240 Query: 241 LHIVSALE-------ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLA 290 +H+V A E+++A I EL AYN EL K+ +++ +++D + D + + Sbjct: 241 IHLVDAASVEGRDPIEDIKA----INKELEAYNPELAKRPQVIAANKMDAMPEEDREVII 296 Query: 291 RKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 E F S+++G G+ ++L ++D Sbjct: 297 EMLEEAFADKDIKIFPISAVSGQGVKELLWYVND 330 >gi|324995441|gb|EGC27353.1| Spo0B-associated GTP-binding protein [Streptococcus sanguinis SK678] gi|327461527|gb|EGF07858.1| Spo0B-associated GTP-binding protein [Streptococcus sanguinis SK1] gi|327473250|gb|EGF18670.1| Spo0B-associated GTP-binding protein [Streptococcus sanguinis SK408] gi|327489381|gb|EGF21174.1| Spo0B-associated GTP-binding protein [Streptococcus sanguinis SK1058] Length = 436 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 143/329 (43%), Positives = 210/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIQVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKAQSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETGKVLTDLVENGQEFIVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELLLELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTHSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESAENLKVFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+T G+ +L+ Sbjct: 304 ANYDEFAELPQIFPISSLTKQGLATLLDA 332 >gi|331701135|ref|YP_004398094.1| GTPase obg [Lactobacillus buchneri NRRL B-30929] gi|329128478|gb|AEB73031.1| GTPase obg [Lactobacillus buchneri NRRL B-30929] Length = 433 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 140/331 (42%), Positives = 210/331 (63%), Gaps = 9/331 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G+GG G ++FRREK++ GGP GG GGRGG+V + S +NTL+DFRY Sbjct: 2 FVDQVKINVKAGNGGNGMVAFRREKYVPNGGPAGGDGGRGGNVIFKVDSGMNTLMDFRYH 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++G G ++ +G +D+V+ VP GT V +I DL + Q +++A G Sbjct: 62 RKFKAKNGGNGANKSMTGRSADDLVIPVPEGTTVTNTVTGEVIGDLVKPDQELVVAKAGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S TN AP A G GQE + L+LK++AD+G++G P+AGKST L+ +T A Sbjct: 122 GGRGNIHFASPTNPAPEIAENGEPGQEVSLSLELKVLADVGLVGFPSAGKSTLLSVITSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V+ + ++F +AD+PG+++ A G G+G +FL+H ERT V+L Sbjct: 182 KPKIAGYHFTTLVPNLGMVRLDDGRDFAVADLPGLVEGASNGVGLGFQFLRHVERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H+V S LE + Y I EL Y+ + K+ +I+ +++D DS D L K +LA Sbjct: 242 HLVDMSGLEGRDPFEDYLAINKELEQYDERILKRPQIIVATKMDLPDSADNLQIFKQQLA 301 Query: 298 TQCG----QVPFEFSSITGHGIPQILECLHD 324 + F SS+T G+ +++ D Sbjct: 302 EHSDADKTREIFPISSVTHTGLTELVRRTAD 332 >gi|163814058|ref|ZP_02205450.1| hypothetical protein COPEUT_00211 [Coprococcus eutactus ATCC 27759] gi|158450507|gb|EDP27502.1| hypothetical protein COPEUT_00211 [Coprococcus eutactus ATCC 27759] Length = 431 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 141/332 (42%), Positives = 207/332 (62%), Gaps = 8/332 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D A++Y+RSG GG G +SFRREK++ GGPDGG GG GGDV +NTL ++R+ Sbjct: 2 FADRARIYVRSGKGGDGHVSFRREKYVPNGGPDGGDGGNGGDVIFVVDEGMNTLTNYRHV 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++A GE+G K+N G+ G D+VL VP GT V + + +I D+ + + ++ GG Sbjct: 62 TKYRAGDGEEGGKKNCHGSNGADIVLKVPPGTVVKDSETGKVILDMAYKKEPVVFLKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN + +ST QAP YA PG +E + L+LK IAD+G++G P+ GKSTFLA VT A Sbjct: 122 GGRGNRTYVTSTMQAPKYAQPGQPAKELTVDLELKCIADVGLVGYPSVGKSTFLARVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA Y FTTL PNLG+V G K F++ADIPGII+ A +G G+G +FL+H ERT V++ Sbjct: 182 RPKIAAYHFTTLVPNLGVVDLGDKNGFVIADIPGIIEGASEGTGLGLQFLRHIERTKVII 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDS----DTLARKKN 294 HIV A + + I +EL YN ++ + +++ +++D +D + K Sbjct: 242 HIVDAASVDGRDPINDIHVINEELKKYNKDIENRPQVIAANKVDLLDDIGYETVIEMLKE 301 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E G F S+++G GI ++L ++D + Sbjct: 302 EFPEDQGYKIFPISAVSGKGINELLWYVNDLV 333 >gi|147810795|emb|CAN76164.1| hypothetical protein VITISV_022942 [Vitis vinifera] Length = 657 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 144/362 (39%), Positives = 215/362 (59%), Gaps = 30/362 (8%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+ +D AK+Y+++GDGG G ++FRREK++ FGGP GG GGRGG+V+++ ++N+L+ FR Sbjct: 174 MRCIDRAKIYVKAGDGGNGVVAFRREKYVPFGGPSGGDGGRGGNVYVEVDGSMNSLLPFR 233 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE--EDGIS--LICDLDQEGQRII 116 HF+A G G RN++GAKGEDVV+ V GT + E DG+ ++ +L GQR + Sbjct: 234 NGVHFRAGRGSHGQGRNQNGAKGEDVVVKVAPGTVIREAGSDGVEGEVLLELLHPGQRAM 293 Query: 117 LAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFL 176 L PGG GG GNA FKS TN+ P A G G E + L+LKL+AD+GI+G PNAGKST L Sbjct: 294 LLPGGRGGRGNASFKSGTNKVPKIAENGEEGPEMWLELELKLVADVGIVGAPNAGKSTLL 353 Query: 177 ASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTE 235 + ++ A+P IA+YPFTTL PNLG+V GY ++AD+PG+++ AH+G G+G FL+HTE Sbjct: 354 SVISAAQPTIANYPFTTLLPNLGVVSFGYDATMVVADLPGLLEGAHKGFGLGHEFLRHTE 413 Query: 236 RTHVLL------------------------HIVSALEENVQAAYQCILDELSAYNSELRK 271 R LL H+V + + + + EL ++ EL + Sbjct: 414 RCSALLFQQTYAQLGKLFLDQAKFMQGVKVHVVDGSSQQPEYEFDAVRLELELFSPELAE 473 Query: 272 KIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 K +V +++D ++ E G F S++ G G +++ C ++ R Sbjct: 474 KPYVVAYNKMDLPEAYERWPSFKERLQARGIGTFCMSAVKGEGTHEVV-CAAYELLRNRT 532 Query: 332 EN 333 E+ Sbjct: 533 ES 534 >gi|313884125|ref|ZP_07817891.1| Obg family GTPase CgtA [Eremococcus coleocola ACS-139-V-Col8] gi|312620572|gb|EFR31995.1| Obg family GTPase CgtA [Eremococcus coleocola ACS-139-V-Col8] Length = 438 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 144/344 (41%), Positives = 212/344 (61%), Gaps = 15/344 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AKV +++G GG G ++FRREK++ GGP GG GGRGG V + L TL+DF+Y Sbjct: 4 FLDYAKVNVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGSVIFKVDEGLRTLMDFKYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE GM +++ GA ED+V+ VP GT + + + I D+ + GQ +++A GG Sbjct: 64 RHFKAKPGENGMSKSKYGAAAEDLVVAVPPGTIIKDANTGQFIADMLEHGQEVVVAQGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G GQE + L+LK++AD+ +IG P+ GKST L+ ++ + Sbjct: 124 GGRGNIRFATHKNPAPAIAENGEPGQEVDLILELKVLADVALIGYPSVGKSTLLSVISNS 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+VK GY +EF++ADIPG+I+ A QG G+G FLKH ERT+VLL Sbjct: 184 KPKIADYQFTTLSPNLGVVKLGYDQEFVVADIPGLIEGASQGVGLGTDFLKHIERTNVLL 243 Query: 242 HIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ + + + ++ EL YN L + ++ +++D + D L K +LA Sbjct: 244 HVIDMAGVHGRDPFDDFVKLMGELEQYNERLLLRPMVIVANKMDQAAAEDNLLEFKAQLA 303 Query: 298 TQCGQVP------FEFSSITGHGIPQILECLHDKIFSIRGENEF 335 F+ S+ G+ ++L+ F+I E +F Sbjct: 304 NYYADKEYSQPEIFQISAWQTKGLDELLKA----TFNIVQEADF 343 >gi|296130121|ref|YP_003637371.1| GTP-binding protein Obg/CgtA [Cellulomonas flavigena DSM 20109] gi|296021936|gb|ADG75172.1| GTP-binding protein Obg/CgtA [Cellulomonas flavigena DSM 20109] Length = 505 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 134/341 (39%), Positives = 197/341 (57%), Gaps = 14/341 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ GDGG G S REKF GPDGG+GG GG V ++ + TL+ F +Q Sbjct: 4 FVDRVVLHATGGDGGHGCASIHREKFKPLAGPDGGNGGNGGSVVLEVDPQVTTLLPFHHQ 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H +A G +GM +RSGA ED+VL VP GT V DG ++ DL G R ++APGG Sbjct: 64 PHRRAASGSQGMGDHRSGATAEDLVLAVPDGTVVKSPDG-EVLADLVGAGARYVVAPGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S +AP +A G G+ + L+LK IAD+ ++G P+AGKS+ +A+V+ A Sbjct: 123 GGLGNAALASPRRKAPGFALLGEPGETADVVLELKTIADVALVGFPSAGKSSLVAAVSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G + +AD+PG+I A QG G+G FL+H ER V++H Sbjct: 183 RPKIADYPFTTLVPNLGVVQAGDARYTVADVPGLIPGASQGKGLGLEFLRHIERCAVVVH 242 Query: 243 IV--SALEENVQAA--YQCILDELSAYNSELR---------KKIEIVGLSQIDTVDSDTL 289 ++ + LE + + EL+AY +L ++ +V L++ID ++ L Sbjct: 243 VLDCATLEPDRDPVSDLDVLEAELAAYAEDLEVAAGGVPLAERPRVVVLNKIDVPEAREL 302 Query: 290 ARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 A G FE S+ + G+ + L +++ + R Sbjct: 303 ADLVRPELEARGLPVFEISTASHEGLRALTFALAERVTAAR 343 >gi|315639367|ref|ZP_07894529.1| spo0B-associated GTP-binding protein [Campylobacter upsaliensis JV21] gi|315480693|gb|EFU71335.1| spo0B-associated GTP-binding protein [Campylobacter upsaliensis JV21] Length = 345 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 134/283 (47%), Positives = 195/283 (68%), Gaps = 2/283 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ + SGDGG G +SFRREK + GGPDGG GG+GGDV I +N +TL++F+ + Sbjct: 2 FIDSVKLTLASGDGGKGAVSFRREKHVPLGGPDGGDGGKGGDVIIICDNNTHTLMNFKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +AQ+G G RN++G KG ++ L VP GTQ+ + ++ DL +EGQR I GG Sbjct: 62 KELRAQNGAAGSGRNKNGKKGTNLELIVPQGTQIIDAKTGKILLDLIKEGQREIFLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+STNQ P YA PG+ G+ + +LKLIAD+G++G PNAGKST ++ V+ A Sbjct: 122 GGLGNTHFKNSTNQRPDYAQPGVKGEICEVRFELKLIADVGLVGFPNAGKSTLISVVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+V+ + Y F++ADIPGII+ A G G+G FLKH ERT+ LL Sbjct: 182 KPEIANYEFTTLTPKLGLVEVDEYHSFVMADIPGIIEGASGGKGLGLMFLKHIERTNFLL 241 Query: 242 HIVSALEE-NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT 283 ++ + + +++ + + EL +++ EL K+ V +S+ID+ Sbjct: 242 FVLDTMRQMSLKEQFIILKKELKSFSKELSKRSFGVMISKIDS 284 >gi|188518289|ref|ZP_03003812.1| GTP-binding protein Obg/CgtA [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188998171|gb|EDU67268.1| GTP-binding protein Obg/CgtA [Ureaplasma urealyticum serovar 11 str. ATCC 33695] Length = 435 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 129/288 (44%), Positives = 187/288 (64%), Gaps = 5/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D+ K+ + +G+GG G +S+RRE + GGP GG+GG GG +W N +L + Sbjct: 1 MAFIDKCKIVLIAGNGGDGIVSWRRETHVPEGGPAGGNGGNGGSIWFVGNHNETSLEFLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ +A+HGEKG +N+ GA EDV + VP+GT V++ ++ D++ + Q+ ++A G Sbjct: 61 YKKIIRAKHGEKGDIKNQHGANAEDVFINVPLGTVVYDAITNEILADINIDQQKYLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKS+ N+AP G LG+ + L+LK IADIGIIGLPNAGKST ++S T Sbjct: 121 GLGGHGNTHFKSAFNKAPNLYELGELGENIEVVLELKTIADIGIIGLPNAGKSTLISSFT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPK A+Y FTTL P LG + G I ADIPG+I+ AH G G+G FLKH ER +L Sbjct: 181 NAKPKTANYMFTTLNPVLGTIYRGQNRIIFADIPGLIEGAHTGVGLGHDFLKHIERCFLL 240 Query: 241 LHIVSALEEN----VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 +H++S L+ N + +AY+ I++EL Y L K ++ ++ID + Sbjct: 241 IHLIS-LDPNDNSDIISAYETIVNELKQYKQSLVNKPIVLVANKIDQI 287 >gi|288929904|ref|ZP_06423746.1| Obg family GTPase CgtA [Prevotella sp. oral taxon 317 str. F0108] gi|288328723|gb|EFC67312.1| Obg family GTPase CgtA [Prevotella sp. oral taxon 317 str. F0108] Length = 395 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 137/322 (42%), Positives = 210/322 (65%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + R K+ GGPDGG GGRGG+++++ N TL+ ++Q Sbjct: 13 FVDYVKIYCRSGKGGRGSMHLRHVKYNPNGGPDGGDGGRGGNIYLRGNHNYWTLLHLKFQ 72 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G + G G+DV + VP GT V+ + +CD+ +GQ ++L GG Sbjct: 73 RHVFAEHGGNGGRDKCHGTDGKDVYIDVPCGTVVYNAETGKYVCDVMHDGQVVMLLKGGR 132 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F+++TNQ P YA PG +E I L+LKL+AD+G++G PNAGKST L+S++ A Sbjct: 133 GGLGNFQFRTATNQTPRYAQPGEPMEEMTIILELKLLADVGLVGFPNAGKSTLLSSLSSA 192 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+YPFTTL P+LGIV +K F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 193 RPKIANYPFTTLEPSLGIVAYHDHKSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 252 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V ++++ Y+ +L+EL+ +N EL K ++ +++ D +D + + + L T Sbjct: 253 FMVPGDTDDIKKEYEVLLNELNNFNPELNDKHRVLAITKCDLLDDELIEMLRETLPT--- 309 Query: 302 QVPFEF-SSITGHGIPQILECL 322 +P F S++TG G+ ++ + L Sbjct: 310 DLPVVFISAVTGQGLSELKDIL 331 >gi|148241410|ref|YP_001226567.1| GTPase ObgE [Synechococcus sp. RCC307] gi|261277763|sp|A5GQQ5|OBG_SYNR3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|147849720|emb|CAK27214.1| Predicted GTPase [Synechococcus sp. RCC307] Length = 331 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 140/321 (43%), Positives = 214/321 (66%), Gaps = 1/321 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ +++G GG G +FRREK++ GGP GG GGRGGDV +QA SNL TL+DF+ Sbjct: 1 MQFIDQARIAVKAGRGGDGICAFRREKYVPAGGPSGGDGGRGGDVVLQADSNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F+A G +G +GA +++ VP GT+V + L+ DL G+++++A G Sbjct: 61 YKRLFQADDGRRGGPNRSTGASANTLLIRVPCGTEVRDLGTDLLLGDLTDNGEQLMIATG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S+ N+AP G G+E+ + L+LKL+A++G++GLPNAGKST ++ ++ Sbjct: 121 GKGGLGNAHYLSNRNRAPEKFTEGKDGEERELQLELKLLAEVGLVGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ + + ADIPG+I A QGAG+G FL+H ERT V Sbjct: 181 AARPKIADYPFTTLVPNLGVVRRPSGDGTVFADIPGLIAGAAQGAGLGHDFLRHIERTRV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V + A Q +L EL AY + L ++ ++ LS+ + +D + L +L+ Sbjct: 241 LIHLVDGSSPDPIADAQVLLGELEAYGNGLLERPRLLVLSKSELLDEEQLEALPAQLSDT 300 Query: 300 CGQVPFEFSSITGHGIPQILE 320 GQ S++TG G+ +L+ Sbjct: 301 LGQPVQVISAVTGQGLDGLLQ 321 >gi|291542572|emb|CBL15682.1| Obg family GTPase CgtA [Ruminococcus bromii L2-63] Length = 423 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 133/301 (44%), Positives = 198/301 (65%), Gaps = 5/301 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+ I++GDGG G +SF REK++ GGPDGG GGRGG++ A SNL+TL DFRY+ Sbjct: 2 FVDTAKIKIKAGDGGDGAVSFHREKYVAAGGPDGGDGGRGGNIVFVADSNLSTLADFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ GE G G ED+V+ VPVGT V EE+ ++ D+ + + I+A GG Sbjct: 62 RKYAAKKGENGRGGRCRGKNAEDLVIRVPVGTIVKEENSGRILADVSGD-EPYIVAKGGK 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN HF + Q P +A PG+ G+E + L+LKL+AD+G++G PN GKST ++ V++A Sbjct: 121 GGWGNPHFATPVRQVPRFAKPGLPGEEFDVVLELKLLADVGLVGFPNVGKSTLVSVVSQA 180 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTT+ P LG+V G F++ADIPG+I+ A QG G+G +FL+H ER +L+ Sbjct: 181 KPEIANYHFTTITPVLGVVSMGEGSSFVMADIPGLIEGAWQGTGLGHQFLRHVERCRMLV 240 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 HI VS E + + + I +EL+ +N EL ++ +V ++ D + +A K + Sbjct: 241 HIVDVSGSEGRDPKEDFITINNELAKFNPELAERPMVVAGNKCDMATDEQIADFKKFVED 300 Query: 299 Q 299 Q Sbjct: 301 Q 301 >gi|73662424|ref|YP_301205.1| GTPase ObgE [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123642761|sp|Q49Y82|OBG_STAS1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|72494939|dbj|BAE18260.1| Spo0B-associated GTP-binding protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 431 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 136/333 (40%), Positives = 209/333 (62%), Gaps = 6/333 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG G + + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGDGASIIFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 HFKA+ G+ G N G E +VL VP GT + D ++ DL + GQR ++A GG Sbjct: 62 THFKAKRGDGGQSSNMHGKNAEHLVLKVPPGTIIKSADSEEVLADLVENGQRAVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F S N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFASPRNPAPDFSENGEPGEEIEVTLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + + F++AD+PG+I+ A +G G+G +FLKH ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTKDQRSFVMADLPGLIEGASEGIGLGHQFLKHVERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S E + Y+ I +ELSAY L ++ +IV +++D ++ D LA K E+ Sbjct: 242 HMIDMSGSEGRDPYEDYKVINEELSAYEHRLEERPQIVVANKMDMPNAEDNLALFKEEIN 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 + S+ I ++L + DK+ +++ Sbjct: 302 DDSVHI-IPLSTFKHDHIDELLYAIADKLEAVK 333 >gi|78778606|ref|YP_396718.1| GTPase ObgE [Prochlorococcus marinus str. MIT 9312] gi|123554717|sp|Q31CW3|OBG_PROM9 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|78712105|gb|ABB49282.1| GTP1/OBG family protein [Prochlorococcus marinus str. MIT 9312] Length = 327 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 128/290 (44%), Positives = 194/290 (66%), Gaps = 1/290 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A + +++G GG G +SFRREKF+ GGP GG+GGRGG + + A +NL TL+DF+ Sbjct: 1 MQFIDQANIILKAGKGGNGIVSFRREKFVPAGGPSGGNGGRGGSIILVADNNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ G KG RSGA GED +L VP GT++ + ++ DL + + + +A G Sbjct: 61 FKREIIAEDGCKGGPNKRSGASGEDTILKVPCGTEIRDFKTGIILGDLTKNKESLTIAIG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA++ S+ N+AP G G+ + L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GRGGHGNAYYLSNQNRAPESFTEGQDGEIWEVQLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+YPFTTL PNLG+V++ + ADIPG+I A G G+G FL+H +RT + Sbjct: 181 SARPKIANYPFTTLIPNLGVVRKVDGNGCLFADIPGLISGAADGVGLGHDFLRHIQRTKI 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 L+H++ ++ EN ++ I EL Y L K I+ L++++ VD D L Sbjct: 241 LVHLIDSIAENPIHDFEIIEQELRKYGKGLIDKERIIVLNKMELVDDDYL 290 >gi|332361612|gb|EGJ39416.1| Spo0B-associated GTP-binding protein [Streptococcus sanguinis SK1056] Length = 436 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 144/331 (43%), Positives = 208/331 (62%), Gaps = 14/331 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIQVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKAQSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETGKVLTDLVENGQEFIVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELLLELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTHSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS--------DTLA 290 H++ SA E + Y I EL +YN L ++ +I+ +++D DS + LA Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPDSAENLKVFQEKLA 303 Query: 291 RKKNELATQCGQVPFEFSSITGHGIPQILEC 321 +E A Q+ F SS+T G+ +L+ Sbjct: 304 ANYDEFA-DLPQI-FPISSLTKQGLAPLLDA 332 >gi|327312363|ref|YP_004327800.1| Obg family GTPase CgtA [Prevotella denticola F0289] gi|326945146|gb|AEA21031.1| Obg family GTPase CgtA [Prevotella denticola F0289] Length = 390 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 136/322 (42%), Positives = 209/322 (64%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + R K+ GGPDGG GG+GG V+++ N TL+ +YQ Sbjct: 6 FVDYVKIYCRSGKGGRGSMHLRHVKYNPNGGPDGGDGGKGGSVYLRGNHNYWTLLHLKYQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G + G G+DV + VP GT V++ + +CD+ +GQ ++L GG Sbjct: 66 RHVYAEHGGNGGRDKCHGTDGKDVYIDVPCGTVVYDAETGKYVCDVMYDGQTVLLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F+++TNQAP YA PG QE + L+LKL+AD+G++G PNAGKST L+S++ A Sbjct: 126 GGLGNFQFRTATNQAPRYAQPGEPMQEMTVILELKLLADVGLVGFPNAGKSTLLSSLSSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTT+ P+LGI+ + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 KPKIANYPFTTMEPSLGIISYRDSQSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V ++++ Y+ +L+EL +N E+ +K ++ +++ D +D + + + L T Sbjct: 246 FMVPGDTDDIKREYEILLNELQQFNPEMLEKHRVLAVTKCDLLDEELIEMLRETLPT--- 302 Query: 302 QVPFEF-SSITGHGIPQILECL 322 +P F S++TG G+ + + L Sbjct: 303 DLPVVFISAVTGQGLDDLKDVL 324 >gi|260890083|ref|ZP_05901346.1| hypothetical protein GCWU000323_01245 [Leptotrichia hofstadii F0254] gi|260860106|gb|EEX74606.1| Obg family GTPase CgtA [Leptotrichia hofstadii F0254] Length = 427 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 141/322 (43%), Positives = 208/322 (64%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE+ + + SG+GG G +FRREKF++FGGPDGG GG+GGD+ A N+NTL+DF+ Sbjct: 2 FIDESVITVISGNGGDGAATFRREKFVQFGGPDGGDGGKGGDIVFIADPNINTLVDFKSS 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKAQ G KG +G GED+V+ VPVGT + + + L+ DLD +++I GG+ Sbjct: 62 KKFKAQDGTKGSAARSTGKSGEDLVIKVPVGTMIRDFETNKLLLDLDNPNEKVIFLKGGD 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSS +AP A G G E I L+LKL+AD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGRGNIHFKSSVKKAPRIAESGREGVELKIKLELKLLADVALVGYPSVGKSSFINKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K K+A Y FTTL P LG+V+ G +E F++AD+PG+I+ AH+G G+GDRFLKH ER +++ Sbjct: 182 KSKVASYHFTTLKPKLGVVRMGDEESFVVADVPGLIEGAHEGVGLGDRFLKHIERCKLII 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 HIV S L+ + + + I EL Y+ +L +K +IV ++ID + D + + Sbjct: 242 HIVDISGLDGRDPKEDFIKINHELKNYSEKLSQKRQIVAANKIDMLYEDEKYDEFEKFVK 301 Query: 299 QCG-QVPFEFSSITGHGIPQIL 319 + G + + S I G+ +L Sbjct: 302 ENGAEYVYPVSVIANDGLKPVL 323 >gi|225868277|ref|YP_002744225.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus] gi|261277711|sp|C0MDB4|OBG_STRS7 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|225701553|emb|CAW98768.1| putative GTP-binding protein [Streptococcus equi subsp. zooepidemicus] Length = 437 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 143/329 (43%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AKV +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKVSVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED++++VP GT V + + ++ DL + GQ ++A GG Sbjct: 64 RKFKAKSGEKGMTKGMHGRGSEDLIISVPQGTTVRDAETGKVLTDLVEHGQEFVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+IK A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGESFAMADLPGLIKGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL AYN L ++ +I+ +++D + + L R K +LA Sbjct: 244 HVIDMSATEGRDPYEDYVAINKELEAYNLRLMERPQIIVANKMDMPGAKEQLQRFKEQLA 303 Query: 298 TQC---GQVP--FEFSSITGHGIPQILEC 321 Q ++P F SS+ G+ +LE Sbjct: 304 VQYDDFDELPMIFPISSLAHQGLDSLLEA 332 >gi|195978393|ref|YP_002123637.1| GTPase ObgE [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|261263102|sp|B4U3Q7|OBG_STREM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|195975098|gb|ACG62624.1| Spo0B-associated GTP-binding protein [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 435 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 142/329 (43%), Positives = 209/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AKV +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 2 FLDTAKVSVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED++++VP GT V + + ++ DL + GQ ++A GG Sbjct: 62 RKFKAKSGEKGMTKGMHGRGSEDLIISVPQGTTVRDAETGKVLTDLVEHGQEFVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTKSGESFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL AYN L ++ +I+ +++D ++ + L R K +LA Sbjct: 242 HVIDMSAAEGRDPYEDYVAINKELEAYNLRLMERPQIIVANKMDMPEAKEQLQRFKEQLA 301 Query: 298 TQCG---QVP--FEFSSITGHGIPQILEC 321 Q ++P F SS+ G+ +LE Sbjct: 302 AQYDDFEELPMIFPISSLAHQGLDSLLEA 330 >gi|194477130|ref|YP_002049309.1| GTP1/Obg family GTP-binding protein [Paulinella chromatophora] gi|261277658|sp|B1X580|OBG_PAUCH RecName: Full=Putative GTPase obg; AltName: Full=GTP-binding protein obg gi|171192137|gb|ACB43099.1| GTP1/Obg family GTP-binding protein [Paulinella chromatophora] Length = 329 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 133/302 (44%), Positives = 194/302 (64%), Gaps = 1/302 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ + +G GG G ++FRREK++ GGP GG GGRGG+V +A SNL TL+DF+ Sbjct: 1 MQFIDQARIMVYAGRGGDGIVAFRREKYVPAGGPSGGDGGRGGNVIFEADSNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F A+ G +G SG G ++V+ VP GT+V L+ DL + Q++++A G Sbjct: 61 YKRIFYAEDGNRGGPNRCSGVSGSNLVIKVPCGTEVRHLGSGILLGDLTEPSQQLMIAFG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S+ N+ P G G+E + L+LKL+A++GIIGLPNAGKST + +++ Sbjct: 121 GRGGLGNAHYLSNRNRVPEKFTLGREGEEWPLQLELKLLAEVGIIGLPNAGKSTLIGNLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIADYPFTTL PNLG V + I ADIPG+I A GAG+G FL+H ERT + Sbjct: 181 AAKPKIADYPFTTLIPNLGAVYRPNGDSIIFADIPGLILGAANGAGLGYDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H++ + +++ + EL AY L + IV LS+I+ + + L + L Sbjct: 241 LVHLIDSSAKDLVHDLIVVEGELIAYGHGLADRPRIVVLSKIELLSGEELHQFSQALRMV 300 Query: 300 CG 301 G Sbjct: 301 SG 302 >gi|15642873|ref|NP_227914.1| GTPase ObgE [Thermotoga maritima MSB8] gi|81859099|sp|Q9WXV3|OBG_THEMA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|4980588|gb|AAD35192.1|AE001696_6 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 435 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 135/333 (40%), Positives = 215/333 (64%), Gaps = 3/333 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+++++GDGG G +SFRREK++ GGPDGG GG GG V+++A +++TLI+F + Sbjct: 8 FVDRVKIFVKAGDGGNGCVSFRREKYVPKGGPDGGDGGNGGFVFLRANPSVSTLIEFVNK 67 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A++G+ GM + G G+D+ + VPVGT V + +I DL++ G+ + +A GG Sbjct: 68 RKFMAENGKHGMGKKMKGRNGKDLFIDVPVGTVVKDAVTGEVIADLNEPGKIVCVARGGR 127 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHF +S QAP A G G+ + + L+LK++AD+G++G PN GKS+ ++ ++ A Sbjct: 128 GGRGNAHFATSIKQAPLIAERGEKGESRWLELELKILADVGLVGYPNVGKSSLISRISNA 187 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIA+YPFTTL PNLG+VK F++ADIPG+I+ A +G G+G+ FL+H ER +++ H Sbjct: 188 RPKIANYPFTTLIPNLGVVKYDDFSFVVADIPGLIEGASEGVGLGNVFLRHVERCYLIAH 247 Query: 243 I--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 + VS E E+ Y I +E+ Y+ L +K EIV ++ID + + L + L Sbjct: 248 VIDVSGYEREDPVRDYFVIREEMKKYSPFLLEKPEIVVANKIDLIGKEELEKILKRLRDA 307 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + S++TG GI ++ L + ++ E Sbjct: 308 TNREVIPVSAVTGEGIDLLVSKLASIVREMKVE 340 >gi|297571628|ref|YP_003697402.1| GTP-binding protein Obg/CgtA [Arcanobacterium haemolyticum DSM 20595] gi|296931975|gb|ADH92783.1| GTP-binding protein Obg/CgtA [Arcanobacterium haemolyticum DSM 20595] Length = 514 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 128/330 (38%), Positives = 199/330 (60%), Gaps = 16/330 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ +G GG G S RREKF GGPDG +GG GGD+ + TL+ + Sbjct: 4 FIDRVVLHLEAGKGGNGAASVRREKFKPLGGPDGANGGHGGDIVFRVDPQETTLLALHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G R G +GED+++ VP GT V + DG +++ D+ G I++A GG Sbjct: 64 PHLKATNGKPGAGDLRHGKRGEDLIVNVPNGTVVKDMDG-NILADMMGAGVEIVIAEGGQ 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S +AP +A G G+ + L+LK +AD+ ++G P+AGKS+ +A+++ A Sbjct: 123 GGLGNAALASPKRKAPGFALLGEEGEAIDVVLELKSVADVALVGFPSAGKSSLIAAMSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G K F +AD+PG+I A +G G+G FL+H ER ++H Sbjct: 183 RPKIADYPFTTLVPNLGVVEAGEKRFTIADVPGLIPGASEGKGLGHEFLRHIERCAAIVH 242 Query: 243 IV--SALEENVQ--AAYQCILDELSAYNS---------ELRKKIEIVGLSQIDTVDSDTL 289 ++ + LE + + + I EL+AY + L ++ IV L++ID D+ + Sbjct: 243 VLDCATLESDRDPISDLETIEGELAAYAAAIPPIDGRVPLMERPRIVVLNKIDVPDARDM 302 Query: 290 AR-KKNELATQCGQVPFEFSSITGHGIPQI 318 A K+EL ++ G FE S ++ G+ ++ Sbjct: 303 ADFVKDELKSR-GLAVFEVSVVSREGLREL 331 >gi|323342040|ref|ZP_08082273.1| Spo0B-associated GTP-binding protein [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464465|gb|EFY09658.1| Spo0B-associated GTP-binding protein [Erysipelothrix rhusiopathiae ATCC 19414] Length = 427 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 145/327 (44%), Positives = 202/327 (61%), Gaps = 8/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D + + +G+GG G SFRRE F+ GGP GG GG+GGD+ A SN +TL+D RY Sbjct: 2 FVDRVNIKVVAGNGGDGMTSFRREAFVPLGGPYGGDGGKGGDIVFVADSNKSTLLDLRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KA HG G + GA +DV+L VPVGT V + + +I DL + GQR ++A GG Sbjct: 62 RVIKASHGTPGKNKKMHGAGADDVILRVPVGTMVIDNEKGIVIADLTEVGQREVVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F ++ N AP ++ G LGQE I ++LKL+AD+GIIG P+ GKST L+ ++RA Sbjct: 122 GGRGNARFATANNPAPTFSEKGELGQELDITIELKLLADVGIIGYPSVGKSTLLSVISRA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP++ADY FTT+ PNLGI + F +AD+PG+I++AH G G+G FLKH ER VL+ Sbjct: 182 KPEVADYHFTTIAPNLGISSSPDGRSFAVADLPGLIEDAHLGKGLGHVFLKHIERCRVLV 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQID-TVDSDTLARKKNELA 297 H+V E+ + Y+ I +EL YN +L KK +V +++D V L + K A Sbjct: 242 HVVDMGAEDGRDPIEDYKVINNELEKYNEDLLKKPMVVVANKMDLEVAPANLEKFK---A 298 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHD 324 FE ++ G GI +L L D Sbjct: 299 AYPDLEIFELVTMVGEGIDSLLYRLAD 325 >gi|315221633|ref|ZP_07863552.1| Obg family GTPase CgtA [Streptococcus anginosus F0211] gi|315189284|gb|EFU22980.1| Obg family GTPase CgtA [Streptococcus anginosus F0211] Length = 436 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 141/329 (42%), Positives = 212/329 (64%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + ++ DL + GQ+ ++A GG Sbjct: 64 RHFKAQSGEKGMTKGMHGRGAEDLIVHVPQGTTVRDAETGKILIDLIENGQKFVVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESAENLKVFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+T G+ +L+ Sbjct: 304 ANYDEFDELPQIFPISSLTKQGLSTLLDA 332 >gi|301300925|ref|ZP_07207097.1| Obg family GTPase CgtA [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851524|gb|EFK79236.1| Obg family GTPase CgtA [Lactobacillus salivarius ACS-116-V-Col5a] Length = 432 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 138/335 (41%), Positives = 211/335 (62%), Gaps = 9/335 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FRREK++ GGP GG GG+GG + ++ L TL+DFRY Sbjct: 2 FVDQIKIEVKAGKGGDGMVAFRREKYVPNGGPAGGDGGKGGSIILKVDQGLRTLMDFRYH 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ G+ GM + G +D ++VP GT V + + L+ DL + +++A GG Sbjct: 62 RIFKAKPGQNGMIKGMYGRGADDTYISVPQGTTVTDAETGELLGDLVEADDELVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 122 GGRGNIKFASPKNPAPEIAENGEPGEERKLKLELKVLADVGLVGFPSVGKSTLLSVVTSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V+ + +++++AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIAEYHFTTLVPNLGMVRLDDGRDYVMADLPGLIEGASQGVGLGIQFLRHVERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + + I +EL Y+ L + +IV S++D DS LA K +LA Sbjct: 242 HLIDMSGVEGRDPYDDFVKINEELKVYDPTLLDRPQIVVASKMDMPDSAKNLAEFKVKLA 301 Query: 298 TQ--CGQVP--FEFSSITGHGIPQILECLHDKIFS 328 QVP E SS+T G+ ++ D + S Sbjct: 302 KDKTLKQVPEVMEISSLTHQGLKELTHRTADVLES 336 >gi|42527254|ref|NP_972352.1| GTPase ObgE [Treponema denticola ATCC 35405] gi|81412071|sp|Q73LW4|OBG_TREDE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|41817678|gb|AAS12263.1| GTP-binding protein, GTP1/Obg family [Treponema denticola ATCC 35405] Length = 382 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 130/302 (43%), Positives = 193/302 (63%), Gaps = 3/302 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 +KF DE+K+ + SG GG G I+FRREK++ GGP GG GGRGGD+ + N+ TL+ R Sbjct: 2 VKFADESKIRVSSGKGGNGCIAFRREKYVPMGGPSGGDGGRGGDLIFEIRRNMRTLVHLR 61 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDL-DQEGQRIILAP 119 +++ +KA++G G R G KG+D ++ +P G + + + I D D E R + Sbjct: 62 HKRVYKAKNGGGGEGSQRFGKKGDDCIIPLPPGCVIKDPETGKTILDFGDAEEGRFVFLK 121 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GGNGG+GN HFK+STNQAP A PG G+ + I ++L +IADIG++G PNAGKS+ L Sbjct: 122 GGNGGWGNCHFKTSTNQAPKTALPGQEGETREIIVELNIIADIGLVGFPNAGKSSLLDYF 181 Query: 180 TRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 T A+PKIA YPFTT PNLG+++ + ++ I+ADIPGI++ A +G G+G RFLKH R+ Sbjct: 182 TNARPKIAPYPFTTKIPNLGVLRVDEERDVIIADIPGILEGASEGIGLGIRFLKHIARSA 241 Query: 239 VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 L ++ ++N AY + EL +Y+ EL +K I+ +++D D+ + KN + Sbjct: 242 GLAFLIDLSDDNYLRAYDILCKELESYSKELAQKKRIIIATKLDLPDTKERFTELKNAIP 301 Query: 298 TQ 299 Q Sbjct: 302 DQ 303 >gi|307564412|ref|ZP_07626953.1| Obg family GTPase CgtA [Prevotella amnii CRIS 21A-A] gi|307346772|gb|EFN92068.1| Obg family GTPase CgtA [Prevotella amnii CRIS 21A-A] Length = 388 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 137/328 (41%), Positives = 211/328 (64%), Gaps = 5/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + R K+ GGPDGG GG+GG V+++ N TL+ ++Q Sbjct: 6 FVDYVKIYCRSGKGGRGSMHLRHVKYNPNGGPDGGDGGKGGSVYLRGNHNYWTLLHLKFQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G + G G+DV + VP GT V++ + +CD+ +GQ ++L GG Sbjct: 66 RHIYAEHGGNGGRDKCHGTDGKDVYIDVPCGTVVYDAETGKFVCDVTYDGQTVLLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F++STNQAP YA PG QE + ++LKL+AD+G++G PNAGKST L+S++ A Sbjct: 126 GGLGNFQFRTSTNQAPRYAQPGDPMQEMTVIMELKLLADVGLVGFPNAGKSTLLSSLSSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTT+ P+LGIV + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 KPKIANYPFTTMEPSLGIVSYRDHHSFVMADIPGIIEGASEGRGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L Sbjct: 246 FMVPGDTDDIKKEYEVLLNELKQFNPEMIDKHRVLAITKSDLLDEELIEMLQETLPK--- 302 Query: 302 QVPFEF-SSITGHGIPQILECLHDKIFS 328 +P F S++TG GI ++ + L ++ S Sbjct: 303 DLPVVFISAVTGQGIEELKDILWKELNS 330 >gi|166031866|ref|ZP_02234695.1| hypothetical protein DORFOR_01567 [Dorea formicigenerans ATCC 27755] gi|166028319|gb|EDR47076.1| hypothetical protein DORFOR_01567 [Dorea formicigenerans ATCC 27755] Length = 429 Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 145/334 (43%), Positives = 211/334 (63%), Gaps = 12/334 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D A + IRSG GG G +SFRRE ++ GGPDGG GGRGGDV + LNTL D+R++ Sbjct: 2 FADRATISIRSGKGGDGHVSFRRELYVPNGGPDGGDGGRGGDVIFEVDEGLNTLQDYRHR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ GE G K+ G +D+VL VP GT + E + +I D+ + +R ++ GG Sbjct: 62 RKYAAKDGEPGGKKRCHGKDADDIVLKVPEGTVIKEAESGKVIADMSGDNRRQVILKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF ++T Q P YA PG +E ++ L+LK+IAD+G++G PN GKST L+ VT A Sbjct: 122 GGLGNQHFATATMQIPKYAQPGQPAKELMVKLELKVIADVGLVGFPNVGKSTLLSRVTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V EG F++ADIPG+I+ A +G G+G FL+H ERT +++ Sbjct: 182 QPKIANYHFTTLNPNLGVVDLEGANGFVIADIPGLIEGASEGIGLGHEFLRHIERTKMMI 241 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD-----TLARK 292 H+V A + V ++ I EL AYN+E+ + +++ ++ID + D + R Sbjct: 242 HVVDAAGSEGRDPVDDIHK-INAELHAYNAEIASRPQVIAANKIDLIYDDGESENPVERL 300 Query: 293 KNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 K E Q +V F S +TG GI ++L + +I Sbjct: 301 KKEFEPQGIKV-FPISGVTGAGIKELLYYVSTEI 333 >gi|284044122|ref|YP_003394462.1| GTP-binding protein Obg/CgtA [Conexibacter woesei DSM 14684] gi|283948343|gb|ADB51087.1| GTP-binding protein Obg/CgtA [Conexibacter woesei DSM 14684] Length = 427 Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 141/323 (43%), Positives = 198/323 (61%), Gaps = 7/323 (2%) Query: 5 DEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQH 64 D A++++++G GG G +SFRRE + GGPDGG GGRGGDV + +L L FR H Sbjct: 4 DRARIHVQAGRGGDGCMSFRRESRVPKGGPDGGDGGRGGDVVLLCDDSLRDLQFFRRTAH 63 Query: 65 FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGG 124 FKA+ G G + R GA G+D+V+ VP GT V +DG DL GQR I+A GG G Sbjct: 64 FKARKGGNGEGKLRHGADGDDLVIRVPPGTVVVLDDGTR--HDLVVPGQRAIIAKGGGGA 121 Query: 125 FGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKP 184 GN HF + T QAP +A + GQE + L LKL+AD+G++GLPNAGKS+ L+ +T A+P Sbjct: 122 RGNKHFATPTRQAPRFAERALAGQEGWVELHLKLLADVGLVGLPNAGKSSLLSRITAAQP 181 Query: 185 KIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 KIADYPFTTL P LG ++ ++ ++ADIPG+I+ A GAG+G FL H ERT +L+H++ Sbjct: 182 KIADYPFTTLTPVLGTIESDDRQLVIADIPGLIEGASDGAGLGHDFLAHVERTRLLVHVL 241 Query: 245 SALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 + + I ELSA+++ L I+ LS+ D V + A + + + G Sbjct: 242 DLAPVDGTDPVENHATIEQELSAHDARLSGLPRILALSKTDLVTPEAAAEAEVQWRERLG 301 Query: 302 -QVP-FEFSSITGHGIPQILECL 322 VP SS TG G+ ++ + L Sbjct: 302 PDVPILRTSSATGEGLDELKKAL 324 >gi|227891093|ref|ZP_04008898.1| GTPase ObgE [Lactobacillus salivarius ATCC 11741] gi|227866967|gb|EEJ74388.1| GTPase ObgE [Lactobacillus salivarius ATCC 11741] Length = 432 Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 138/335 (41%), Positives = 211/335 (62%), Gaps = 9/335 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FRREK++ GGP GG GG+GG + ++ L TL+DFRY Sbjct: 2 FVDQIKIEVKAGKGGDGMVAFRREKYVPNGGPAGGDGGKGGSIILKVDQGLRTLMDFRYH 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ G+ GM + G +D ++VP GT V + + L+ DL + +++A GG Sbjct: 62 RIFKAKPGQNGMIKGMYGRGADDTYISVPQGTTVTDAETGELLGDLVEADDELVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 122 GGRGNIKFASPKNPAPEIAENGEPGEERKLKLELKVLADVGLVGFPSVGKSTLLSVVTSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V+ + +++++AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIAEYHFTTLVPNLGMVRLDDGRDYVMADLPGLIEGASQGVGLGIQFLRHVERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + + I +EL Y+ L + +IV S++D DS LA K +LA Sbjct: 242 HLIDMSGVEGRDPYDDFVKINEELKVYDPTLLDRPQIVVASKMDMPDSAKNLAEFKVKLA 301 Query: 298 TQ--CGQVP--FEFSSITGHGIPQILECLHDKIFS 328 QVP E SS+T G+ ++ D + S Sbjct: 302 KDKTLKQVPEVMEISSLTHQGLKELTHRTADVLES 336 >gi|322389206|ref|ZP_08062767.1| Spo0B-associated GTP-binding protein [Streptococcus parasanguinis ATCC 903] gi|321144111|gb|EFX39528.1| Spo0B-associated GTP-binding protein [Streptococcus parasanguinis ATCC 903] Length = 437 Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 151/348 (43%), Positives = 216/348 (62%), Gaps = 15/348 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVIFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ+GEKGM + G ED+ + VP GT V + + +I DL + GQ I+A GG Sbjct: 64 RHFKAQNGEKGMTKGMHGRGAEDLYVRVPQGTTVRDAETGKVITDLVENGQEYIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELELELKVLADVGLVGFPSVGKSTLLSVITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTPSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E N Y I EL YN L ++ +I+ +++D +S + L K +LA Sbjct: 244 HVIDMSASEGRNPYEDYVQINKELETYNLRLMERPQIIVANKMDMPESQENLKEFKKKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC---LHDKI--FSIRGENEF 335 + ++P F SS+ G+ +LE L DK F + E+E Sbjct: 304 ANYDEFDELPQIFPISSLAHQGLDNLLEATAELLDKTPEFLLYSEDEM 351 >gi|299140174|ref|ZP_07033341.1| GTP-binding protein Obg/CgtA [Acidobacterium sp. MP5ACTX8] gi|298597812|gb|EFI53983.1| GTP-binding protein Obg/CgtA [Acidobacterium sp. MP5ACTX8] Length = 366 Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 135/324 (41%), Positives = 205/324 (63%), Gaps = 9/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DEA++ I++GDGG G ++FRREKF+ GGP GG GG GGD+ + ++ + NTL+ FR+ Sbjct: 2 FIDEARIRIKAGDGGNGCMAFRREKFVPRGGPSGGDGGHGGDILMTSSLSHNTLVHFRFN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 K++ G G+ N SG GE VL VPVGT ++++D L+ D + I++A GG Sbjct: 62 PEHKSERGGHGLGSNMSGYAGEHTVLKVPVGTLLYDDDTGELVHDFAHPNEEIVIARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST+QAP G G+ + L+L+L+AD G++G PN GKST ++ ++ A Sbjct: 122 GGRGNQHFATSTHQAPREHELGRPGEARNYRLELRLLADAGLVGYPNVGKSTLISRLSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG----YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 KPKIA+Y FTTL PNLG+V+ G + F +AD+PG+I+ AH GAG+G +FLKH ERT Sbjct: 182 KPKIANYAFTTLEPNLGVVQVGDAPYEQSFTVADMPGLIEGAHLGAGLGVQFLKHIERTS 241 Query: 239 VLLHIVSALEENVQA----AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 VL+H+V + + + Y I EL +++ L K I+ ++ D + D L +K Sbjct: 242 VLVHLVDVSDASGRPDPVEDYNVITAELKSFDPALAAKPTILVANKADVANPDKL-KKLT 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQI 318 +A + + S+++G G+P + Sbjct: 301 AMAKRKKLPLYTISAVSGEGLPAL 324 >gi|281492166|ref|YP_003354146.1| GTPase, Obg/CgtA family [Lactococcus lactis subsp. lactis KF147] gi|81856556|sp|Q9CF94|OBG_LACLA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|12724592|gb|AAK05685.1|AE006389_5 GTP-binding protein Obg [Lactococcus lactis subsp. lactis Il1403] gi|281375837|gb|ADA65331.1| GTPase, Obg/CgtA family [Lactococcus lactis subsp. lactis KF147] gi|326407052|gb|ADZ64123.1| GTPase, Obg/CgtA family [Lactococcus lactis subsp. lactis CV56] Length = 437 Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 137/327 (41%), Positives = 214/327 (65%), Gaps = 10/327 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD A++ +++G GG G ++FRREK++ GGP GG GG+GG V + ++TL+DFRY Sbjct: 4 FLDTARIEVKAGKGGDGAVAFRREKYVPDGGPAGGDGGKGGSVIFKVDEGMSTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F+ + GEKGM + G ED+++ VP GT V + + ++ DL ++ Q +A GG Sbjct: 64 RIFRGKPGEKGMNKGMHGRGAEDLIVHVPQGTTVKDNETGDVLVDLIEKDQEFAVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G++KI+ L+L+++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEVAENGEPGEDKILLLELRVLADVGLVGFPSVGKSTLLSVVSNA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTT+ PN+G+V+ GY + F++AD+PG+I+ AH GAG+G +FL+H ERT VLL Sbjct: 184 RPKIGAYHFTTITPNIGMVQVGYGDSFVMADMPGLIEGAHSGAGLGIQFLRHIERTRVLL 243 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 H+ +S LE + Y+ I DEL +YN L ++ +I+ +++D + ++ LA K +LA Sbjct: 244 HVLDMSELEGRDPYEDYKTINDELESYNLRLMERPQIIVANKMDMPEAAERLAEFKEKLA 303 Query: 298 TQCG---QVP--FEFSSITGHGIPQIL 319 G ++P FE S +T G+ +L Sbjct: 304 ADLGPDKEMPEIFEVSGLTKTGLQGLL 330 >gi|30686886|ref|NP_197358.2| GTP1/OBG family protein [Arabidopsis thaliana] gi|22136032|gb|AAM91598.1| GTP-binding protein obg-like [Arabidopsis thaliana] gi|30725516|gb|AAP37780.1| At5g18570 [Arabidopsis thaliana] gi|332005197|gb|AED92580.1| GTP1/OBG family protein [Arabidopsis thaliana] Length = 681 Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 138/346 (39%), Positives = 210/346 (60%), Gaps = 13/346 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+ D AK+Y+R+GDGG G ++FRREKF+ FGGP GG GGRGG+V+++ ++N+L+ FR Sbjct: 208 MRCFDRAKIYVRAGDGGNGVVAFRREKFVPFGGPSGGDGGRGGNVYVEVDGSMNSLLPFR 267 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE------------EDGISLICDL 108 HF+A GE G + +SGAKG++VV+ V GT V + + ++ +L Sbjct: 268 KSVHFRAGRGEHGRGKMQSGAKGDNVVVKVAPGTVVRQAREVGSEVEGEEGEEKEVLLEL 327 Query: 109 DQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLP 168 GQR +L PGG GG GNA FKS N+ P A G G E + L+LKL+AD+GI+G P Sbjct: 328 LHPGQRALLLPGGRGGRGNASFKSGMNKVPRIAENGEEGPEMWLDLELKLVADVGIVGAP 387 Query: 169 NAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIG 227 NAGKST L+ ++ A+P IA+YPFTTL PNLG+V Y ++AD+PG+++ AH+G G+G Sbjct: 388 NAGKSTLLSVISAAQPTIANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGAHRGFGLG 447 Query: 228 DRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 FL+HTER L+H+V + ++ + EL ++ E+ +K +V +++D D+ Sbjct: 448 HEFLRHTERCSALVHVVDGSAPQPELEFEAVRLELELFSPEIAEKPYVVAYNKMDLPDAY 507 Query: 288 TLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 E G PF S++ G +++ +++ + R N Sbjct: 508 EKWPMFQETLRARGIEPFCMSAVQREGTHEVISSVYELLKKYRAAN 553 >gi|161723237|ref|NP_267743.2| GTPase ObgE [Lactococcus lactis subsp. lactis Il1403] Length = 435 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 137/327 (41%), Positives = 214/327 (65%), Gaps = 10/327 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD A++ +++G GG G ++FRREK++ GGP GG GG+GG V + ++TL+DFRY Sbjct: 2 FLDTARIEVKAGKGGDGAVAFRREKYVPDGGPAGGDGGKGGSVIFKVDEGMSTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F+ + GEKGM + G ED+++ VP GT V + + ++ DL ++ Q +A GG Sbjct: 62 RIFRGKPGEKGMNKGMHGRGAEDLIVHVPQGTTVKDNETGDVLVDLIEKDQEFAVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G++KI+ L+L+++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPRNPAPEVAENGEPGEDKILLLELRVLADVGLVGFPSVGKSTLLSVVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTT+ PN+G+V+ GY + F++AD+PG+I+ AH GAG+G +FL+H ERT VLL Sbjct: 182 RPKIGAYHFTTITPNIGMVQVGYGDSFVMADMPGLIEGAHSGAGLGIQFLRHIERTRVLL 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 H+ +S LE + Y+ I DEL +YN L ++ +I+ +++D + ++ LA K +LA Sbjct: 242 HVLDMSELEGRDPYEDYKTINDELESYNLRLMERPQIIVANKMDMPEAAERLAEFKEKLA 301 Query: 298 TQCG---QVP--FEFSSITGHGIPQIL 319 G ++P FE S +T G+ +L Sbjct: 302 ADLGPDKEMPEIFEVSGLTKTGLQGLL 328 >gi|71281515|ref|YP_271158.1| GTPase ObgE [Colwellia psychrerythraea 34H] gi|123630894|sp|Q47VL4|OBG_COLP3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|71147255|gb|AAZ27728.1| GTP-binding protein, GTP1/Obg family [Colwellia psychrerythraea 34H] Length = 387 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 137/289 (47%), Positives = 202/289 (69%), Gaps = 6/289 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE ++ + +GDGG G +SFR+EKFIE+GGP+GG GG GGDV++ A LNTLID+R Sbjct: 1 MKFVDEVEIRVEAGDGGNGCVSFRKEKFIEYGGPNGGDGGDGGDVYLMADEGLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ +A+ G+ G +N +G ED+VL VPVGT+ ++D I DL +GQ++++A G Sbjct: 61 FERFHRAKRGQNGQPQNCTGKGSEDLVLKVPVGTRAVDQDTGEQIGDLTYKGQKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN++P G G+ + + L+L L+AD+G++GLPNAGKST + SV+ Sbjct: 121 GWHGLGNLRFKSSTNRSPRQRTDGTPGEIRSLKLELLLLADVGLLGLPNAGKSTLIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+ADYPFTTL PNLG+V+ + + F++ADIPGII+ A GAG+G +FLKH ER + Sbjct: 181 AATPKVADYPFTTLVPNLGVVRLDTQRSFVIADIPGIIEGAADGAGLGTQFLKHLERCRI 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 LLH++ + + ++ A + I+ EL +N +L K V +++D V Sbjct: 241 LLHVIDIMPVDGSDPLENA-KVIISELEQHNEKLAGKPRWVVFNKLDLV 288 >gi|225018869|ref|ZP_03708061.1| hypothetical protein CLOSTMETH_02819 [Clostridium methylpentosum DSM 5476] gi|224948339|gb|EEG29548.1| hypothetical protein CLOSTMETH_02819 [Clostridium methylpentosum DSM 5476] Length = 422 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 136/328 (41%), Positives = 207/328 (63%), Gaps = 5/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ I++GDGG G ++F REK++ GGPDGG GG+GGDV Q NL+TLIDFRY+ Sbjct: 2 FVDSVKIKIKAGDGGDGAVAFHREKYVASGGPDGGDGGKGGDVVFQVDDNLSTLIDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + A+ GE G N +G G+D+V+ VP GT V + ++ DL + +II A GG Sbjct: 62 TKYNAERGENGRGNNCTGRNGQDLVIRVPRGTVVRDLKSGKIMADLSSDEPQII-AHGGK 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F + T Q P +A PG G+ I L+LKL+AD+G++G PN GKST ++ V+ A Sbjct: 121 GGKGNARFATPTRQIPRFAKPGFPGEGFEISLELKLLADVGLVGFPNVGKSTLISVVSAA 180 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL P LG+VK G F++ADIPG+I+ A +G G+G FL+H ER +++ Sbjct: 181 KPKIANYHFTTLVPVLGVVKMGEGNSFVMADIPGLIEGASEGVGLGHAFLRHVERCRLIV 240 Query: 242 HIVSAL-EENVQAA--YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++V E A ++ I EL+ +++EL ++ +IV ++ D + +A ++ + Sbjct: 241 NVVDVSGSEGRDPAEDFKLINSELTKFSAELGERPQIVAANKCDMATPEQIAAFRSFVEE 300 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKI 326 G FE S+ T G +++ + +++ Sbjct: 301 DLGLPFFEISAATTQGTQELVAEIWNQL 328 >gi|88803552|ref|ZP_01119077.1| putative Spo0B-related GTP-binding protein [Polaribacter irgensii 23-P] gi|88780564|gb|EAR11744.1| putative Spo0B-related GTP-binding protein [Polaribacter irgensii 23-P] Length = 329 Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 144/328 (43%), Positives = 207/328 (63%), Gaps = 7/328 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D KVY SG GG G + REK+I GGPDGG GGRGG + ++ N+ TL +++ Sbjct: 6 FVDYIKVYATSGKGGQGSVHLHREKYITKGGPDGGDGGRGGHIILRGDKNMWTLFHLKFK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HF+A+ G G K +G DV + VP+GT + + D ++ ++ + G+ +IL PGG Sbjct: 66 RHFRAEGGGGGSKSRSTGRDAADVYVDVPLGTIIRDADTDEVLHEITEHGKEVILLPGGK 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FKSSTNQ P YA PGI GQ+ ++LKL+AD+G++G PNAGKST L+ +T A Sbjct: 126 GGLGNWNFKSSTNQTPRYAQPGIDGQDGWFRIELKLLADVGLVGFPNAGKSTLLSVLTSA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLGIV+ ++ F++ADIPGII+ A +G G+G RFL+H ER LL Sbjct: 186 KPKIADYAFTTLKPNLGIVEHRNQQTFVIADIPGIIEGAAEGKGLGHRFLRHIERNSALL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A +++ Y +L+EL +N EL K ++ +S+ D +D + K +L G Sbjct: 246 FLIPADSDDINKEYAILLNELKQHNPELLDKDRLLAISKTDMLDEELKEEIKADLPD--G 303 Query: 302 QVPFEFSSITGHGIPQILECLHDKIFSI 329 SSI G L+ L DK++ + Sbjct: 304 VEALFISSIEETG----LQELKDKLWEM 327 >gi|332298409|ref|YP_004440331.1| GTPase obg [Treponema brennaborense DSM 12168] gi|332181512|gb|AEE17200.1| GTPase obg [Treponema brennaborense DSM 12168] Length = 381 Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 137/286 (47%), Positives = 190/286 (66%), Gaps = 3/286 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 ++F DEA + +RSG GG G I+FRREK++ GGP GG GG+GGDV NL TL R Sbjct: 2 IQFADEALIEVRSGKGGNGCIAFRREKYVPMGGPAGGDGGKGGDVVFCVKRNLRTLAHMR 61 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQ--RIILA 118 Y+Q FKA+ G G NR G GEDV++ VP GT +F+ D LI + E + R + Sbjct: 62 YKQVFKARSGADGEGGNRFGRDGEDVIIPVPPGTSLFDADSGELIREFTTESEDDRFVFL 121 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GGNGG+GN+HFK+STNQAP YA+ G G+ + + ++L ++AD+G++G PNAGKS+ L Sbjct: 122 TGGNGGWGNSHFKTSTNQAPRYAHEGKPGEVRRLRVELSIMADVGLVGFPNAGKSSLLDH 181 Query: 179 VTRAKPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 T A+PKIA YPFTT PNLG++ + ++ I+ADIPGII+ A +GAG+G RFLKH R+ Sbjct: 182 FTNARPKIAPYPFTTKIPNLGVLHADADRDIIIADIPGIIEGASEGAGLGIRFLKHISRS 241 Query: 238 HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT 283 LL I+ +++ AY + ELS+++ EL K IV ++ DT Sbjct: 242 AGLLFIIDCSDDDCLNAYDTLCAELSSFSPELAAKPRIVLCNKTDT 287 >gi|284990126|ref|YP_003408680.1| GTP-binding protein Obg/CgtA [Geodermatophilus obscurus DSM 43160] gi|284063371|gb|ADB74309.1| GTP-binding protein Obg/CgtA [Geodermatophilus obscurus DSM 43160] Length = 491 Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 136/320 (42%), Positives = 200/320 (62%), Gaps = 5/320 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V++ +G+GG G S REKF GGPDGG+GG GGDV ++ +++TL+DF ++ Sbjct: 4 FVDRVVVHVAAGNGGHGVASIHREKFKPLGGPDGGNGGNGGDVVLEVDPSVHTLLDFHHR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G G NR GA+GED VL VP GT V DG +I DL G R++LA GG Sbjct: 64 PHQKAGNGRPGEGSNRHGARGEDRVLRVPAGTVVSTPDG-RVIADLVGTGTRVVLAHGGK 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA ++ +AP +A G G+ ++LK IAD+G++G P+AGKS+ +A+++ A Sbjct: 123 GGLGNAALANARRKAPGFALLGEPGEAFDAVIELKSIADVGLVGFPSAGKSSLIAAMSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G F +AD+PG+I A +G G+G FL+H ER VL+H Sbjct: 183 RPKIADYPFTTLVPNLGVVRAGDTVFTMADVPGLIPGASEGRGLGLEFLRHIERCAVLVH 242 Query: 243 IV--SALE--ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 +V + +E + ++ + + EL+ Y +L ++ + L++ID D L E Sbjct: 243 VVDMATMEPGRDPESDIEALQHELAQYRGDLVDRLRVAVLNKIDVPDGRELVDLVREPLE 302 Query: 299 QCGQVPFEFSSITGHGIPQI 318 Q G F S+ TG G+ ++ Sbjct: 303 QRGLQVFPVSAATGEGLREL 322 >gi|325852076|ref|ZP_08171159.1| Obg family GTPase CgtA [Prevotella denticola CRIS 18C-A] gi|325484632|gb|EGC87548.1| Obg family GTPase CgtA [Prevotella denticola CRIS 18C-A] Length = 390 Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 137/322 (42%), Positives = 207/322 (64%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + R K+ GGPDGG GG+GG V+++ N TL+ +YQ Sbjct: 6 FVDYVKIYCRSGKGGRGSMHLRHVKYNPNGGPDGGDGGKGGSVYLRGNHNYWTLLHLKYQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G + G G+DV + VP GT V++ + +CD+ +GQ ++L GG Sbjct: 66 RHVYAEHGGNGGRDKCHGTDGKDVYIDVPCGTVVYDAETGKYVCDVMYDGQTVLLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F+++TNQAP YA PG QE + L+LKL+AD+G++G PNAGKST L+S++ A Sbjct: 126 GGLGNFQFRTATNQAPRYAQPGEPMQEMTVILELKLLADVGLVGFPNAGKSTLLSSLSSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTT+ P+LGIV + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 KPKIANYPFTTMEPSLGIVSYRDSQSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V + ++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L T Sbjct: 246 FMVPGDTDYIKREYEILLNELQQFNPEMLDKHRVLAVTKCDLLDEELIEMLRETLPT--- 302 Query: 302 QVPFEF-SSITGHGIPQILECL 322 +P F S++TG G+ + + L Sbjct: 303 DLPVVFISAVTGQGLDDLKDVL 324 >gi|239637551|ref|ZP_04678523.1| Obg family GTPase CgtA [Staphylococcus warneri L37603] gi|239596769|gb|EEQ79294.1| Obg family GTPase CgtA [Staphylococcus warneri L37603] Length = 430 Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 136/333 (40%), Positives = 207/333 (62%), Gaps = 7/333 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVIFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 HFKA+ GE G N G ED+VL VP GT V + ++ DL ++GQR ++A GG Sbjct: 62 THFKAKKGENGQSSNMHGRNTEDLVLKVPPGTIVKSVETEEVLADLVEDGQRAVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSENGEPGEEIDVTLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDNRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S E + Y I EL AY L + +I+ +++D D+ D L K E+ Sbjct: 242 HMIDMSGSEGRDPIDDYHVINKELVAYKQRLEDRPQIIVANKMDMPDAEDNLELFKEEIG 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +P S+++ I Q+L + D++ ++ Sbjct: 302 DDHIIIP--LSAVSRDNIDQLLYTIADQLEKVK 332 >gi|15605143|ref|NP_219928.1| GTPase ObgE [Chlamydia trachomatis D/UW-3/CX] gi|255311224|ref|ZP_05353794.1| GTPase ObgE [Chlamydia trachomatis 6276] gi|255317526|ref|ZP_05358772.1| GTPase ObgE [Chlamydia trachomatis 6276s] gi|81817214|sp|O84423|OBG_CHLTR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|3328847|gb|AAC68015.1| GTP Binding Protein [Chlamydia trachomatis D/UW-3/CX] gi|296435939|gb|ADH18113.1| GTPase ObgE [Chlamydia trachomatis G/9768] gi|296436866|gb|ADH19036.1| GTPase ObgE [Chlamydia trachomatis G/11222] gi|296437800|gb|ADH19961.1| GTPase ObgE [Chlamydia trachomatis G/11074] gi|297140300|gb|ADH97058.1| GTPase ObgE [Chlamydia trachomatis G/9301] Length = 335 Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 134/332 (40%), Positives = 208/332 (62%), Gaps = 8/332 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ + +R+G GG G +++R+EK++ GGP GG+GG GG + I+A +N+ + ++R Sbjct: 2 FVDQITLELRAGKGGNGVVAWRKEKYLPKGGPYGGNGGNGGSILIEAVTNMYSFEEYRNL 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KA G+ G NR+G G+D+VL VP GT + + LI D ++G+RI++ GG Sbjct: 62 RFLKADDGQAGASNNRTGRNGKDLVLKVPEGTLLRDAATGELIHDFTKDGERIVVCQGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK+STN+AP A PG G+ +++ L+LKLIADIG++G PNAGKST ++ R Sbjct: 122 GGKGNVFFKTSTNRAPTKATPGKPGEIRLVELELKLIADIGLVGFPNAGKSTLFNTLART 181 Query: 183 KPKIADYPFTTLYPNLGIV-KEGY---KEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 + K+ YPFTTL+P+LG+V +EG K +I+ADIPGII+ A Q G+G FL+H ERT Sbjct: 182 EVKVGAYPFTTLHPSLGLVHQEGMLYQKPWIMADIPGIIEGASQNRGLGLDFLRHIERTR 241 Query: 239 VLLHI--VSALEENV-QAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 +LL + +S +E + + + ++ EL AY EL+ K ++ L++ID + D + Sbjct: 242 LLLFVIDISGIERHSPEQDLKILMGELLAYKEELKDKDMVIALNKIDQLLPDEREERVAL 301 Query: 296 LATQCGQVPF-EFSSITGHGIPQILECLHDKI 326 L Q F S +TG G+ + + K+ Sbjct: 302 LKQQFPDQEFILLSGLTGEGVDALYDLFKSKL 333 >gi|322387740|ref|ZP_08061349.1| Spo0B-associated GTP-binding protein [Streptococcus infantis ATCC 700779] gi|321141607|gb|EFX37103.1| Spo0B-associated GTP-binding protein [Streptococcus infantis ATCC 700779] Length = 436 Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 142/329 (43%), Positives = 210/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKAQSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETGKVLTDLIENGQEFIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HI+ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 244 HIIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLEEFKKKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 304 ANYDEFEELPPIFPISGLTKQGLAPLLDA 332 >gi|261263186|sp|Q8K733|OBG_STRP3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|28811010|dbj|BAC63944.1| putative GTP-binding protein [Streptococcus pyogenes SSI-1] Length = 437 Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 140/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 64 RKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ D L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQDNLKAFKKKLA 303 Query: 298 TQCGQ-----VPFEFSSITGHGIPQILEC 321 TQ + + F SS+ G+ +LE Sbjct: 304 TQYDEFNDLPMIFSISSLAHQGLENLLEA 332 >gi|312880195|ref|ZP_07739995.1| GTP-binding protein Obg/CgtA [Aminomonas paucivorans DSM 12260] gi|310783486|gb|EFQ23884.1| GTP-binding protein Obg/CgtA [Aminomonas paucivorans DSM 12260] Length = 460 Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 138/328 (42%), Positives = 203/328 (61%), Gaps = 6/328 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD ++ + G GG G +SFRREKF+ GGPDGG+GGRGG VW+ A NL TL DF Sbjct: 1 MKFLDTVEIQVLGGAGGNGCMSFRREKFVAKGGPDGGNGGRGGSVWLVADQNLQTLADFE 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + + A+ G G NR+G G D L VP GT +++ + DL + G R+++A G Sbjct: 61 YARRYSAEPGRAGSGSNRNGRGGSDRELRVPCGTLIYDAETGEGFADLVEPGDRLLVARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F SS +AP +A G+ G+ + + L+L+LIAD G +G PNAGKS+ L +++ Sbjct: 121 GRGGRGNRAFSSSQRKAPRFAEKGMPGESRPLRLELRLIADFGFVGCPNAGKSSLLQALS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +A+PKIA YPFTTL PNLG++ + +LADIPG+I+ AH+ G+G FL+H +RT +L Sbjct: 181 QARPKIAAYPFTTLSPNLGVLSTESERVVLADIPGLIEGAHENRGLGIAFLRHVQRTRLL 240 Query: 241 LHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH++ E E + + + E+ A++ EL ++ +V ++ D +D + R L Sbjct: 241 LHVLDLSEGDGETLVQQWSLVRKEMEAHDPELTERPCLVIGNKTDLLDPEARERLLPLLR 300 Query: 298 TQCGQVPFEF---SSITGHGIPQILECL 322 + + F F S+ +G GIP + E L Sbjct: 301 STFKEWGFGFLAVSAQSGEGIPALAEHL 328 >gi|311743034|ref|ZP_07716842.1| Spo0B-associated GTP-binding protein [Aeromicrobium marinum DSM 15272] gi|311313714|gb|EFQ83623.1| Spo0B-associated GTP-binding protein [Aeromicrobium marinum DSM 15272] Length = 533 Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 131/298 (43%), Positives = 186/298 (62%), Gaps = 13/298 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ +++ +GDGG G S REKF GGPDGG+GG GGDV ++ ++ TL+D+ ++ Sbjct: 6 FVDQVTLHVAAGDGGHGVASVHREKFKPLGGPDGGNGGHGGDVILRVARDVTTLVDYHHE 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G G NRSG KG D+VL VP GT V DG ++ DL G +++A GG Sbjct: 66 PHRKAGNGAPGAGSNRSGGKGSDLVLLVPDGTVVRAGDG-EVLADLVGAGTELVIAAGGR 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA SS +AP +A G GQ + L+LK++ADIG+IG P+AGKS+ +AS++RA Sbjct: 125 GGLGNAALASSKRKAPGFALKGEPGQSMTLTLELKVVADIGLIGFPSAGKSSLIASISRA 184 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V G F +AD+PG+I+ A +G G+G FL+H ER L+H Sbjct: 185 RPKIADYPFTTLVPNLGVVTAGQTTFTVADVPGLIEGASEGKGLGHDFLRHVERCAALVH 244 Query: 243 IVSALEENVQAAYQCILD------ELSAY----NSELRKKIEIVGLSQIDTVDSDTLA 290 ++ VQ + D EL+ Y ++ + IV L++ D D+ +A Sbjct: 245 VIDCA--TVQPGRDPLTDLDVIENELTRYGEQTGTDFSDRPRIVALNKADVPDAAEIA 300 >gi|257126229|ref|YP_003164343.1| GTPase ObgE [Leptotrichia buccalis C-1013-b] gi|257050168|gb|ACV39352.1| GTP-binding protein Obg/CgtA [Leptotrichia buccalis C-1013-b] Length = 427 Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 141/322 (43%), Positives = 206/322 (63%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE+ + + SG GG G +FRREKF++FGGPDGG GG+GGD+ A N+NTL+DF+ Sbjct: 2 FIDESVITVISGKGGDGAATFRREKFVQFGGPDGGDGGKGGDIVFIADPNINTLVDFKSS 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKAQ G KG +G GED+++ VPVGT + + + L+ DLD +++I GG+ Sbjct: 62 KKFKAQDGTKGSAARSTGKSGEDLIIKVPVGTMIRDFETNKLLLDLDNPNEKVIFLKGGD 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSS +AP A G G E I L+LKL+AD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGRGNIHFKSSVKKAPRIAESGREGVELKIKLELKLLADVALVGYPSVGKSSFINKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K K+A Y FTTL P LG+V+ G +E F++AD+PG+I+ AH+G G+GDRFLKH ER +++ Sbjct: 182 KSKVASYHFTTLKPKLGVVRMGDEESFVVADVPGLIEGAHEGVGLGDRFLKHIERCKLII 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 HIV S L+ N + + I EL Y+ +L K +IV ++ID + D + + Sbjct: 242 HIVDISGLDGRNPEEDFVKINHELKNYSEKLANKPQIVVANKIDMLYEDEKYDEFEKFVK 301 Query: 299 QCG-QVPFEFSSITGHGIPQIL 319 + G + + S I G+ +L Sbjct: 302 EKGIKYVYPVSVIANDGLKPVL 323 >gi|21910546|ref|NP_664814.1| GTPase ObgE [Streptococcus pyogenes MGAS315] gi|161486352|ref|NP_802111.2| GTPase ObgE [Streptococcus pyogenes SSI-1] gi|21904746|gb|AAM79617.1| putative GTP-binding protein [Streptococcus pyogenes MGAS315] Length = 435 Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 140/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 2 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 62 RKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ D L K +LA Sbjct: 242 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQDNLKAFKKKLA 301 Query: 298 TQCGQ-----VPFEFSSITGHGIPQILEC 321 TQ + + F SS+ G+ +LE Sbjct: 302 TQYDEFNDLPMIFSISSLAHQGLENLLEA 330 >gi|283769121|ref|ZP_06342026.1| Obg family GTPase CgtA [Bulleidia extructa W1219] gi|283104307|gb|EFC05685.1| Obg family GTPase CgtA [Bulleidia extructa W1219] Length = 424 Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 118/283 (41%), Positives = 185/283 (65%), Gaps = 3/283 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 +D K+ +++GDGG G +++R EKF GGP GG GG+GGD++ Q +N TL R+ Sbjct: 1 MIDVVKIALKAGDGGKGAVAWRHEKFYPNGGPFGGDGGKGGDIYFQVDTNETTLTKLRFT 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KA +G G+ + G +DV+++VP+GT + L+ DL + GQ++++A GG Sbjct: 61 KSIKAGNGMPGLTKKMHGKSADDVIVSVPLGTMIRHAISHDLLADLTEPGQKVLIAKGGK 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF ++ N AP +A PG +G+ + ++L+L+AD G+IG P+ GKSTFL+ VT A Sbjct: 121 GGLGNQHFATARNDAPEFAQPGEIGESLTVVVELRLLADAGLIGYPSVGKSTFLSVVTNA 180 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P IA+YPFTTL PN+G+V + F+LAD+PG+I+ A +G G+G FL+H +R VL+ Sbjct: 181 RPDIAEYPFTTLEPNIGVVSLPDGRGFVLADMPGLIEGAKEGKGLGHEFLRHIQRCRVLI 240 Query: 242 HIVSALEE--NVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 H++ E N Y+ I +EL Y+ L+K+ +IV +++D Sbjct: 241 HVIDMSGEWRNPVDDYRIINEELFQYDDSLKKRPQIVVANKMD 283 >gi|319938997|ref|ZP_08013361.1| GTPase obg [Streptococcus anginosus 1_2_62CV] gi|319812047|gb|EFW08313.1| GTPase obg [Streptococcus anginosus 1_2_62CV] Length = 434 Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 140/329 (42%), Positives = 211/329 (64%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 2 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + ++ DL + GQ+ ++A GG Sbjct: 62 RHFKAQSGEKGMTKGMHGRGAEDLIVHVPQGTTVRDAETGKILTDLIENGQKFVVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 122 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +L Sbjct: 242 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMSESTENLKVFKEKLV 301 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+T G+ +L+ Sbjct: 302 ANYDEFDELPQIFPISSLTKQGLSTLLDA 330 >gi|90962072|ref|YP_535988.1| GTPase ObgE [Lactobacillus salivarius UCC118] gi|122448824|sp|Q1WT46|OBG_LACS1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|90821266|gb|ABD99905.1| GTP-binding protein [Lactobacillus salivarius UCC118] Length = 432 Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 136/325 (41%), Positives = 208/325 (64%), Gaps = 9/325 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G GG G ++FRREK++ GGP GG GG+GG + ++ L TL+DFRY Sbjct: 2 FVDQIKIEVKAGKGGDGMVAFRREKYVPNGGPAGGDGGKGGSIILKVDQGLRTLMDFRYH 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ G+ GM + G +D ++VP GT V + + L+ DL + +++A GG Sbjct: 62 RIFKAKPGQNGMIKGMYGRGADDTYISVPQGTTVTDAETGELLGDLVEADDELVVAKGGC 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 122 GGRGNIKFASPKNPAPEIAENGEPGEERKLKLELKVLADVGLVGFPSVGKSTLLSVVTSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V+ + +++++AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIAEYHFTTLVPNLGMVRLDDGRDYVMADLPGLIEGASQGVGLGIQFLRHVERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + + I +EL Y+ L + +IV S++D DS LA K +LA Sbjct: 242 HLIDMSGVEGRDPYDDFVKINEELKVYDPTLLDRPQIVVASKMDMPDSAKNLAEFKVKLA 301 Query: 298 TQ--CGQVP--FEFSSITGHGIPQI 318 QVP E SS+T G+ ++ Sbjct: 302 KDKTLKQVPEVMEISSLTHQGLKEL 326 >gi|258508357|ref|YP_003171108.1| GTPase ObgE [Lactobacillus rhamnosus GG] gi|257148284|emb|CAR87257.1| GTP-binding protein [Lactobacillus rhamnosus GG] Length = 410 Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 137/307 (44%), Positives = 192/307 (62%), Gaps = 9/307 (2%) Query: 21 ISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSG 80 ++FRREKF+ FGGP GG GGRGG + + L TL+DFRYQ+HFKA G G ++ G Sbjct: 2 VAFRREKFVPFGGPAGGDGGRGGSIILYVDEGLRTLMDFRYQRHFKAPAGGNGQGKSMYG 61 Query: 81 AKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYY 140 ED + VP GT V + D ++ DL GQ +++A GG GG GN HF S N AP Sbjct: 62 RAAEDRRIAVPAGTTVTDADTGEVLGDLTAPGQELVVAKGGRGGRGNIHFVSPKNTAPEI 121 Query: 141 ANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI 200 A G GQ + I L+LK++AD+G++G P+ GKST L+ VT+AKPKIA Y FTTL PNLG+ Sbjct: 122 AENGEPGQHRFIKLELKVLADVGLVGFPSVGKSTLLSVVTQAKPKIAAYQFTTLVPNLGM 181 Query: 201 VK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQ 256 V+ + +F++AD+PG+I+ A QG G+G +FL+H ERT VLLH+V EN + Y Sbjct: 182 VQLDDGTDFVMADLPGLIEGASQGVGLGIQFLRHVERTRVLLHLVEMDPENGREPLEDYD 241 Query: 257 CILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELATQCGQVP---FEFSSITG 312 I EL AY+ + K+ E++ +++D ++ A K L + G P FE SS+T Sbjct: 242 QIRKELGAYDENILKRPELIVATKMDLRGAAERFASFKAALVDR-GIDPANIFEISSLTH 300 Query: 313 HGIPQIL 319 G+ ++ Sbjct: 301 RGVMPLM 307 >gi|224110580|ref|XP_002315565.1| predicted protein [Populus trichocarpa] gi|222864605|gb|EEF01736.1| predicted protein [Populus trichocarpa] Length = 452 Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 131/324 (40%), Positives = 201/324 (62%), Gaps = 1/324 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+ D AK+Y+++GDGG G ++FRREKF+ GGP GG GGRGG+V+++ ++N+L+ FR Sbjct: 1 MRCFDRAKIYVKAGDGGNGVVAFRREKFVPLGGPSGGDGGRGGNVYLEVDGSINSLLPFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + H++A G G GAKGE++V+ VP GT V E ++ +L GQR ++ PG Sbjct: 61 NRVHYRAGRGSHGQGSCMGGAKGEEIVVKVPPGTVVREAGNEEVLLELLSPGQRALVLPG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FK +N+ P A G G E + L+LKL+AD+GI+G PNAGKST L+ ++ Sbjct: 121 GRGGRGNAAFKCGSNKVPRIAENGEEGSEMWLELELKLVADVGIVGAPNAGKSTLLSVIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P IA+YPFTTL PNLG+V Y ++AD+PG+++ AH+G G+G FL+HTER Sbjct: 181 AAQPAIANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSA 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V + + + + EL ++ EL +K +V +++D ++ + E Sbjct: 241 LVHVVDGSSQQPEFEFDAVRLELEMFSPELAEKPYVVAYNKMDLPEAYENWQLFKEKLEA 300 Query: 300 CGQVPFEFSSITGHGIPQILECLH 323 G F S++ G +++ H Sbjct: 301 RGIETFCMSAVKREGTHEVICAAH 324 >gi|109947154|ref|YP_664382.1| GTPase ObgE [Helicobacter acinonychis str. Sheeba] gi|122973367|sp|Q17Y93|OBG_HELAH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|109714375|emb|CAJ99383.1| GTP-binding protein [Helicobacter acinonychis str. Sheeba] Length = 360 Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 143/293 (48%), Positives = 193/293 (65%), Gaps = 6/293 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA++G G RN +G KGED ++ VP GTQVF + + L DL +R++ GG Sbjct: 62 KHHKAKNGAPGGTRNCTGKKGEDKIIIVPPGTQVFADGALWL--DLITPKERVLALKGGK 119 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ A Sbjct: 120 GGLGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNA 179 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V K F++ADIPGII+ A +G G+G FLKH ERT VL Sbjct: 180 KPKIAHYEFTTLVPNLGVVSVDEKSGFLMADIPGIIEGASEGKGLGISFLKHIERTKVLA 239 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLAR 291 ++ A L+ ++ Y+ + EL ++ L K V L++ D D DT+ + Sbjct: 240 FVLDASRLDLGIKEQYKRLRLELEKFSPALANKPFGVLLNKCDVAEDIDTMTK 292 >gi|76789149|ref|YP_328235.1| GTPase ObgE [Chlamydia trachomatis A/HAR-13] gi|237802843|ref|YP_002888037.1| GTPase ObgE [Chlamydia trachomatis B/Jali20/OT] gi|237804765|ref|YP_002888919.1| GTPase ObgE [Chlamydia trachomatis B/TZ1A828/OT] gi|123606887|sp|Q3KLT5|OBG_CHLTA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|76167679|gb|AAX50687.1| GTP-binding protein CgtA [Chlamydia trachomatis A/HAR-13] gi|231273065|emb|CAX09978.1| putative nucleotide-binding protein [Chlamydia trachomatis B/TZ1A828/OT] gi|231274077|emb|CAX10871.1| putative nucleotide-binding protein [Chlamydia trachomatis B/Jali20/OT] Length = 335 Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 134/332 (40%), Positives = 207/332 (62%), Gaps = 8/332 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ + +R+G GG G +++R+EK++ GGP GG+GG GG + I+A +N+ + ++R Sbjct: 2 FVDQITLELRAGKGGNGVVAWRKEKYLPKGGPYGGNGGNGGSILIEAVTNMYSFEEYRNL 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 KA G+ G NR+G G+D+VL VP GT + + LI D ++G+RI++ GG Sbjct: 62 SFLKADDGQAGASNNRTGRNGKDLVLKVPEGTLLRDAATGELIHDFTKDGERIVVCQGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK+STN+AP A PG G+ +++ L+LKLIADIG++G PNAGKST ++ R Sbjct: 122 GGKGNVFFKTSTNRAPTKATPGKPGEIRLVELELKLIADIGLVGFPNAGKSTLFNTLART 181 Query: 183 KPKIADYPFTTLYPNLGIV-KEGY---KEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 + K+ YPFTTL+P+LG+V +EG K +I+ADIPGII+ A Q G+G FL+H ERT Sbjct: 182 EVKVGAYPFTTLHPSLGLVHQEGMLYQKPWIMADIPGIIEGASQNRGLGLDFLRHIERTR 241 Query: 239 VLLHI--VSALEENV-QAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 +LL + +S +E + + + ++ EL AY EL+ K ++ L++ID + D + Sbjct: 242 LLLFVIDISGIERHSPEQDLKILMGELLAYKEELKDKDMVIALNKIDQLLPDEREERVAL 301 Query: 296 LATQCGQVPF-EFSSITGHGIPQILECLHDKI 326 L Q F S +TG G+ + + K+ Sbjct: 302 LKQQFPDQEFILLSGLTGEGVDALYDLFKSKL 333 >gi|251798385|ref|YP_003013116.1| GTP-binding protein Obg/CgtA [Paenibacillus sp. JDR-2] gi|247546011|gb|ACT03030.1| GTP-binding protein Obg/CgtA [Paenibacillus sp. JDR-2] Length = 439 Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 130/325 (40%), Positives = 208/325 (64%), Gaps = 8/325 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK++++ G+GG G +S+RREK++ GGP GG GG GGDV + L TL+DFRYQ Sbjct: 2 FVDKAKIFVKGGNGGNGIVSYRREKYVPEGGPAGGDGGNGGDVIFRVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFK GE+G ++ GA +D+++ +P GT + ++D +I D+ + GQ +++A GG Sbjct: 62 KHFKGPAGERGKVKSMHGASADDMIIRIPPGTVIVDDDTQEIIADMTRHGQEVVVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATINNPAPDICENGEEGQERWVTLELKVMADVGLVGFPSVGKSTLLSVVSGA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V G + F++AD+PG+I+ AH+G G+G FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTITPNLGVVDVGDGRSFVMADLPGLIEGAHEGVGLGHEFLRHVERTRVIV 241 Query: 242 HIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 H++ + ++ I +EL YN +L ++ +I+ +++D + +D L K +L Sbjct: 242 HVLDMAGTEGRDPFEDWVKINEELVKYNEKLSERPQIIAANKMDMPEAADNLELFKQQLD 301 Query: 298 TQCGQVPF---EFSSITGHGIPQIL 319 G + SS+T G+ ++L Sbjct: 302 EVRGDREYLIVPISSLTKQGVQELL 326 >gi|224541320|ref|ZP_03681859.1| hypothetical protein CATMIT_00480 [Catenibacterium mitsuokai DSM 15897] gi|224525757|gb|EEF94862.1| hypothetical protein CATMIT_00480 [Catenibacterium mitsuokai DSM 15897] Length = 425 Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 134/305 (43%), Positives = 206/305 (67%), Gaps = 7/305 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D K+Y+++G GG G ++FRRE + GGP GG GGRGG V AT++L+TL+D R Sbjct: 1 MKFIDRVKIYVQAGTGGNGTVAFRREAHVPKGGPSGGDGGRGGSVIFVATNSLSTLLDLR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +KAQ+GEKG + GA +D+V+ VPVGT V+++D ++I DL ++GQR ++A G Sbjct: 61 YYREYKAQNGEKGHAKKMHGADADDLVIRVPVGTCVYDDDTGNIIADLTKDGQRAVIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F SS N AP G G++ + ++LKL+AD+G++G P+ GKST L+ V+ Sbjct: 121 GRGGRGNARFASSRNPAPKICENGEPGEKFNLRVELKLLADVGLVGFPSVGKSTLLSVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGI--VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 +A+P+IADY FTT+ PNLG+ VK+G + F++AD+PG+I+ A QG G+G +FL+H ER Sbjct: 181 KARPQIADYHFTTIVPNLGVVQVKDG-RSFVMADLPGLIEGASQGKGLGHQFLRHIERCR 239 Query: 239 VLLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKN 294 V++HI+ + Y+ I EL Y L ++ +I+ +++D ++ + L + K Sbjct: 240 VIVHIIDMSGSEGRDPYEDYVTINKELGEYEYRLLERPQIIVANKMDGDEAEENLKKFKE 299 Query: 295 ELATQ 299 +L Q Sbjct: 300 KLGDQ 304 >gi|319947301|ref|ZP_08021534.1| Spo0B-associated GTP-binding protein [Streptococcus australis ATCC 700641] gi|319746543|gb|EFV98803.1| Spo0B-associated GTP-binding protein [Streptococcus australis ATCC 700641] Length = 437 Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 145/332 (43%), Positives = 209/332 (62%), Gaps = 10/332 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVIFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ+GEKGM + G ED+ + VP GT V + + +I DL + GQ I+A GG Sbjct: 64 RHFKAQNGEKGMTKGMHGRGAEDLFVRVPQGTTVRDAETGKVITDLVENGQEYIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELELELKVLADVGLVGFPSVGKSTLLSVITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTLSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL YN L ++ +I+ +++D +S + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYVQINKELETYNLRLMERPQIIVANKMDMPESQENLKEFKKKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILECLHD 324 + ++P F SS+ G+ +LE D Sbjct: 304 VNYDEFDELPQIFPISSLAHQGLDNLLEATAD 335 >gi|237743288|ref|ZP_04573769.1| SPO0B-associated GTP-binding protein [Fusobacterium sp. 7_1] gi|229433067|gb|EEO43279.1| SPO0B-associated GTP-binding protein [Fusobacterium sp. 7_1] Length = 428 Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 141/335 (42%), Positives = 213/335 (63%), Gaps = 4/335 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + +++G+GG G +FRREKF++FGGPDGG GG+GGDV A SN+NTLIDF+++ Sbjct: 2 FIDEVIITVKAGNGGDGSAAFRREKFVQFGGPDGGDGGKGGDVIFIADSNINTLIDFKFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA +GE G K+ G KGED+++ VPVGTQV + LI D+ G++ +L GG Sbjct: 62 KLFKAGNGENGQKKQMYGKKGEDLIIKVPVGTQVRDFTTGKLILDMSVNGEQRVLLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN HFK+S +AP A G G E + L+LKL+AD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGYGNVHFKNSIRKAPKIAEKGGEGAEIKVKLELKLLADVALVGYPSVGKSSFINKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K+ Y FTTL P LG+V+ E K F++ADIPG+I+ AH+G G+GD+FL+H ER ++ Sbjct: 182 NSKVGSYHFTTLEPKLGVVRLEEGKSFVIADIPGLIEGAHEGVGLGDKFLRHIERCKMIY 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 HIV A E + ++ I EL ++ +L K +IV +++D + K + T Sbjct: 242 HIVDAAEIEGRDCIEDFEKINYELKKFSEKLAHKKQIVIANKMDLIWDMKKYNKFKDYLT 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 + G + S + G+ ++L +D + I E+ Sbjct: 302 EKGIEIYPVSVLLNEGLKEVLYKTYDMLCHIERES 336 >gi|261266898|sp|B1N057|OBG_LEUCK RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 439 Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 138/334 (41%), Positives = 211/334 (63%), Gaps = 11/334 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D+A++ +++G GG G +SFR EKF+ GGP GG GG GG + + L TL+DFR Sbjct: 1 MAFVDQAEIEVKAGKGGDGIVSFRHEKFVAMGGPFGGDGGHGGSIIFKVDEGLRTLMDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HFKAQ G G + +GA ED + VP GT V + + ++ DL + GQ +++ G Sbjct: 61 YNRHFKAQPGGNGGTKGMTGASAEDRYIKVPQGTTVKDVETGEVLGDLLENGQELVVVKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF + N AP + G GQ + + L+LK++AD+G++G P+AGKST L+ V+ Sbjct: 121 GRGGRGNIHFATPANPAPELSENGEPGQVRKLKLELKVLADVGLVGFPSAGKSTLLSVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+A Y FTTL PN+G+V+ + ++F++AD+PG+I+ A QG G+G +FL+H ERT V Sbjct: 181 NAKPKVAAYHFTTLSPNIGMVRLDDARDFVMADLPGLIEGASQGVGLGFQFLRHVERTRV 240 Query: 240 LLHIV--SALEEN-VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNE 295 +LH+V S +E N Y+ ILDEL Y+ + + IV +++D DS + L + + E Sbjct: 241 VLHLVDMSGIEGNDPYTQYRKILDELGQYDETILNRPHIVVPTKMDMPDSEENLVKFRQE 300 Query: 296 LATQCGQVPFE-----FSSITGHGIPQILECLHD 324 +A G +P + S++T G+ ++ D Sbjct: 301 VAADSG-LPVQPEIMPISALTREGVQPLMRLTAD 333 >gi|257456405|ref|ZP_05621601.1| GTPase ObgE [Treponema vincentii ATCC 35580] gi|257446065|gb|EEV21112.1| GTPase ObgE [Treponema vincentii ATCC 35580] Length = 465 Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 128/284 (45%), Positives = 185/284 (65%), Gaps = 2/284 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 ++F DEA + + SG GG G I+FRREK++ GGP GG GGRGG+V + N+ TL+ R Sbjct: 2 IQFADEALIEVSSGKGGNGCIAFRREKYVPKGGPAGGDGGRGGNVLFEIKRNMRTLVHLR 61 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDL-DQEGQRIILAP 119 +++ F+A++G G R GAKG D ++ +P G + + D LI D D+ I Sbjct: 62 HKRVFRAKNGLDGQGSKRFGAKGADCIIPLPPGCIIKDADTGELIYDFGDRTDGLIPFLT 121 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GGNGG+GN HFK+STNQAP A PG GQ + + ++L +IADIG++G PNAGKS+ L Sbjct: 122 GGNGGWGNCHFKTSTNQAPRTALPGQEGQTRRLKIELNIIADIGLVGFPNAGKSSLLDYF 181 Query: 180 TRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 T A+PKIA YPFTT PNLG+++ + ++ I+ADIPGI++ A +G G+G RFLKH RT Sbjct: 182 TNARPKIAPYPFTTKIPNLGVLRIDDEQDIIIADIPGILEGASEGIGLGIRFLKHISRTA 241 Query: 239 VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 L ++ ++N AY + EL+AY+ EL K ++ +++D Sbjct: 242 GLAFLIDLSDDNYLTAYDTLCGELAAYSDELAAKKRVIIATKLD 285 >gi|255533264|ref|YP_003093636.1| GTPase ObgE [Pedobacter heparinus DSM 2366] gi|255346248|gb|ACU05574.1| GTP-binding protein Obg/CgtA [Pedobacter heparinus DSM 2366] Length = 337 Score = 221 bits (564), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 140/329 (42%), Positives = 202/329 (61%), Gaps = 6/329 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ RSG GGAG R+ GGPDGG GGRGG + ++ S TL+ +Y+ Sbjct: 7 FVDYVKICCRSGKGGAGSAHLHRDIRTATGGPDGGDGGRGGHIILRGNSQFWTLLHLKYR 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A G G +G G+D +L VP+GT + + I ++ ++G+ IL PGG Sbjct: 67 KHIIAPDGLPGSSGTSTGKSGKDEILDVPLGTIAKDAETGHTIFEITEDGETKILTPGGR 126 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+ T Q P +A PG G+E+ I L+LK++AD+G++G PNAGKST L+ ++ A Sbjct: 127 GGLGNWHFKTPTLQTPRFAQPGEAGKEEWIVLELKVLADVGLVGFPNAGKSTLLSVLSAA 186 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IADYPFTTL PNLGIV K F++ADIPGII+ A +G G+G RFL+H ER VLL Sbjct: 187 KPEIADYPFTTLVPNLGIVSYRDSKSFVMADIPGIIEGASKGKGLGYRFLRHIERNSVLL 246 Query: 242 HIVSA-LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +V A ++ Y+ + EL YN+EL +K ++ +++ D +D + + K EL Sbjct: 247 FMVPADTHRSIAEEYEILKSELKDYNAELMQKPHLLAITKSDMLDEELMEEMKKELPK-- 304 Query: 301 GQVPFEF-SSITGHGIPQILECLHDKIFS 328 +P F SS+ G+ Q+ + L + I S Sbjct: 305 -NIPSIFISSVAQKGLVQLKDMLWESINS 332 >gi|209554030|ref|YP_002284896.1| GTPase ObgE [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|261277732|sp|B5ZBV6|OBG_UREU1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|209541531|gb|ACI59760.1| Obg family GTPase CgtA [Ureaplasma urealyticum serovar 10 str. ATCC 33699] Length = 435 Score = 221 bits (564), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 128/288 (44%), Positives = 186/288 (64%), Gaps = 5/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D+ K+ + +G+GG G +S+RRE + GGP GG+GG GG +W N +L + Sbjct: 1 MAFIDKCKIVLIAGNGGDGIVSWRRETHVPEGGPAGGNGGNGGSIWFVGNHNETSLEFLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ +A+HGEKG +N+ GA EDV + VP+GT V++ ++ D++ + Q+ ++A G Sbjct: 61 YKKIIRAKHGEKGDIKNQHGANAEDVFINVPLGTVVYDAITNEILADINIDQQKYLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKS+ N+AP G LG+ + L+LK IADIGIIGLPNAGKST ++S T Sbjct: 121 GLGGHGNTHFKSAFNKAPNLYELGELGENIEVVLELKTIADIGIIGLPNAGKSTLISSFT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPK A+Y FTTL P LG + I ADIPG+I+ AH G G+G FLKH ER +L Sbjct: 181 NAKPKTANYMFTTLNPVLGTIYRDQNRIIFADIPGLIEGAHTGVGLGHDFLKHIERCFLL 240 Query: 241 LHIVSALEEN----VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 +H++S L+ N + +AY+ I++EL Y L K ++ ++ID + Sbjct: 241 IHLIS-LDPNDNSDIISAYETIVNELKQYKQSLVNKPIVLVANKIDQI 287 >gi|238750114|ref|ZP_04611617.1| Uncharacterized GTP-binding protein yhbZ [Yersinia rohdei ATCC 43380] gi|238711658|gb|EEQ03873.1| Uncharacterized GTP-binding protein yhbZ [Yersinia rohdei ATCC 43380] Length = 370 Score = 221 bits (564), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 127/271 (46%), Positives = 190/271 (70%), Gaps = 4/271 (1%) Query: 21 ISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSG 80 +SFRREK+I GGPDGG GG GGD+++ A NLNTLID+R+ + F+A+ G+ G R+ +G Sbjct: 1 MSFRREKYIPNGGPDGGDGGDGGDIYLLADENLNTLIDYRFVKSFRAERGQNGQSRDCTG 60 Query: 81 AKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYY 140 +G+D+ + VPVGT++ ++ ++ D+ + GQR+++A GG G GN FKSS N+AP Sbjct: 61 KRGKDITIKVPVGTRILDQGTGEILGDMTRHGQRLMVAKGGFHGLGNTRFKSSVNRAPRQ 120 Query: 141 ANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI 200 G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ AKPK+ADYPFTTL P+LG+ Sbjct: 121 KTMGTEGETRELALELLLLADVGMLGLPNAGKSTFIRAVSAAKPKVADYPFTTLIPSLGV 180 Query: 201 VKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL---EENVQAAYQ 256 V+ +++ F++ADIPG+I+ A GAG+G RFLKH ER VLLH+V E + + Sbjct: 181 VRMDHEQSFVVADIPGLIEGASDGAGLGIRFLKHLERCRVLLHLVDLAPIDESDPVENAK 240 Query: 257 CILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 I++EL Y+ L +K + ++ID VD + Sbjct: 241 IIINELQQYSENLAEKPRWLVFNKIDLVDPE 271 >gi|171920867|ref|ZP_02932029.1| GTP-binding protein Obg/CgtA [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185178932|ref|ZP_02964693.1| GTP-binding protein Obg/CgtA [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024090|ref|ZP_02996831.1| GTP-binding protein Obg/CgtA [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188524347|ref|ZP_03004379.1| GTP-binding protein Obg/CgtA [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867800|ref|ZP_03079800.1| Spo0B-associated GTP-binding protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273764|ref|ZP_03206298.1| Spo0B-associated GTP-binding protein [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|225550474|ref|ZP_03771423.1| GTP-binding protein Obg/CgtA [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551210|ref|ZP_03772156.1| GTP-binding protein Obg/CgtA [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903075|gb|EDT49364.1| GTP-binding protein Obg/CgtA [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209195|gb|EDU06238.1| GTP-binding protein Obg/CgtA [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188019136|gb|EDU57176.1| GTP-binding protein Obg/CgtA [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|195659936|gb|EDX53316.1| GTP-binding protein Obg/CgtA [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660497|gb|EDX53754.1| Spo0B-associated GTP-binding protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249519|gb|EDY74301.1| Spo0B-associated GTP-binding protein [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|225379025|gb|EEH01390.1| GTP-binding protein Obg/CgtA [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379628|gb|EEH01990.1| GTP-binding protein Obg/CgtA [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 435 Score = 221 bits (564), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 128/288 (44%), Positives = 186/288 (64%), Gaps = 5/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D+ K+ + +G+GG G +S+RRE + GGP GG+GG GG +W N +L + Sbjct: 1 MAFIDKCKIVLIAGNGGDGIVSWRRETHVPEGGPAGGNGGNGGSIWFVGNHNETSLEFLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ +A+HGEKG +N+ GA EDV + VP+GT V++ ++ D++ + Q+ ++A G Sbjct: 61 YKKIIRAKHGEKGDIKNQHGANAEDVFINVPLGTVVYDAITNEILADINIDQQKYLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKS+ N+AP G LG+ + L+LK IADIGIIGLPNAGKST ++S T Sbjct: 121 GLGGHGNTHFKSAFNKAPNLYELGELGENIEVVLELKTIADIGIIGLPNAGKSTLISSFT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPK A+Y FTTL P LG + I ADIPG+I+ AH G G+G FLKH ER +L Sbjct: 181 NAKPKTANYMFTTLNPVLGTIYRDQNRIIFADIPGLIEGAHTGVGLGHDFLKHIERCFLL 240 Query: 241 LHIVSALEEN----VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 +H++S L+ N + +AY+ I++EL Y L K ++ ++ID + Sbjct: 241 IHLIS-LDPNDNSDIISAYETIVNELKQYKQSLVNKPIVLVANKIDQI 287 >gi|255321968|ref|ZP_05363118.1| Obg family GTPase CgtA [Campylobacter showae RM3277] gi|255301072|gb|EET80339.1| Obg family GTPase CgtA [Campylobacter showae RM3277] Length = 351 Score = 221 bits (564), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 131/286 (45%), Positives = 191/286 (66%), Gaps = 2/286 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D + + SG GGAG +SFRREK + GGPDGG GG GGDV+ A +N +TL ++ + Sbjct: 2 FIDSVNLTLSSGHGGAGSVSFRREKHVILGGPDGGDGGDGGDVYFVADNNTHTLAVYKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + AQ+GE GM R G +GE + L VP GT V + + L+CDL EGQR + GG Sbjct: 62 KAMHAQNGEAGMGRRMHGKRGEHLELIVPPGTAVLDAETGELLCDLTSEGQRELFLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSS NQAP YA G+ G+ + + L+LKLIAD+G++G PN GKST +++V+ A Sbjct: 122 GGLGNVHFKSSINQAPEYAQKGLEGETREVRLELKLIADVGLVGFPNVGKSTLISTVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+V+ + Y F++ADIPGII+ A +G G+G +FL+H ERT +LL Sbjct: 182 KPQIANYEFTTLTPKLGLVEVDEYSGFVMADIPGIIEGASEGRGLGVQFLRHVERTKILL 241 Query: 242 HIVS-ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 ++ A +++ + + E + ++ EL K+ + L++ D ++ Sbjct: 242 FMLDLANYRSLEEQFDALRAETAKFSGELTKRDYAIALTRADAAEN 287 >gi|170017684|ref|YP_001728603.1| GTPase [Leuconostoc citreum KM20] gi|169804541|gb|ACA83159.1| Predicted GTPase [Leuconostoc citreum KM20] Length = 466 Score = 221 bits (564), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 138/334 (41%), Positives = 211/334 (63%), Gaps = 11/334 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D+A++ +++G GG G +SFR EKF+ GGP GG GG GG + + L TL+DFR Sbjct: 28 MAFVDQAEIEVKAGKGGDGIVSFRHEKFVAMGGPFGGDGGHGGSIIFKVDEGLRTLMDFR 87 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HFKAQ G G + +GA ED + VP GT V + + ++ DL + GQ +++ G Sbjct: 88 YNRHFKAQPGGNGGTKGMTGASAEDRYIKVPQGTTVKDVETGEVLGDLLENGQELVVVKG 147 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF + N AP + G GQ + + L+LK++AD+G++G P+AGKST L+ V+ Sbjct: 148 GRGGRGNIHFATPANPAPELSENGEPGQVRKLKLELKVLADVGLVGFPSAGKSTLLSVVS 207 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+A Y FTTL PN+G+V+ + ++F++AD+PG+I+ A QG G+G +FL+H ERT V Sbjct: 208 NAKPKVAAYHFTTLSPNIGMVRLDDARDFVMADLPGLIEGASQGVGLGFQFLRHVERTRV 267 Query: 240 LLHIV--SALEEN-VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNE 295 +LH+V S +E N Y+ ILDEL Y+ + + IV +++D DS + L + + E Sbjct: 268 VLHLVDMSGIEGNDPYTQYRKILDELGQYDETILNRPHIVVPTKMDMPDSEENLVKFRQE 327 Query: 296 LATQCGQVPFE-----FSSITGHGIPQILECLHD 324 +A G +P + S++T G+ ++ D Sbjct: 328 VAADSG-LPVQPEIMPISALTREGVQPLMRLTAD 360 >gi|312867230|ref|ZP_07727440.1| Obg family GTPase CgtA [Streptococcus parasanguinis F0405] gi|311097359|gb|EFQ55593.1| Obg family GTPase CgtA [Streptococcus parasanguinis F0405] Length = 437 Score = 221 bits (564), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 150/348 (43%), Positives = 216/348 (62%), Gaps = 15/348 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVIFLVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ+GEKGM + G ED+ + VP GT V + + +I DL + GQ I+A GG Sbjct: 64 RHFKAQNGEKGMTKGMHGRGAEDLYVRVPQGTTVRDAETGKVITDLVENGQEYIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELELELKVLADVGLVGFPSVGKSTLLSVITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTPSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL YN L ++ +I+ +++D +S + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYVQINKELETYNLRLMERPQIIVANKMDMPESQENLKEFKKKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC---LHDKI--FSIRGENEF 335 + ++P F SS+ G+ +LE L DK F + E+E Sbjct: 304 ANYDEFDELPQIFPISSLAHQGLDNLLEATAELLDKTPEFLLYSEDEM 351 >gi|125623758|ref|YP_001032241.1| GTPase ObgE [Lactococcus lactis subsp. cremoris MG1363] gi|261266844|sp|A2RJQ6|OBG_LACLM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|124492566|emb|CAL97509.1| GTP-binding protein Obg [Lactococcus lactis subsp. cremoris MG1363] gi|300070527|gb|ADJ59927.1| GTPase ObgE [Lactococcus lactis subsp. cremoris NZ9000] Length = 437 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 136/327 (41%), Positives = 214/327 (65%), Gaps = 10/327 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD A++ +++G GG G ++FRREK++ GGP GG GG+GG V + ++TL+DFRY Sbjct: 4 FLDTARIEVKAGKGGDGAVAFRREKYVPDGGPAGGDGGKGGSVIFKVDEGMSTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F+ + GEKGM + G ED+++ VP GT V + + ++ DL ++ Q ++A GG Sbjct: 64 RIFRGKPGEKGMNKGMHGRGAEDLIVHVPQGTTVKDNETGDVLVDLIEKDQEFVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G++KI+ L+L+++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEVAENGEPGEDKILLLELRVLADVGLVGFPSVGKSTLLSVVSNA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTT+ PN+G+V+ GY + F++AD+PG+I+ AH GAG+G +FL+H ERT VLL Sbjct: 184 RPKIGAYHFTTITPNIGMVQVGYGDSFVMADMPGLIEGAHSGAGLGIQFLRHIERTRVLL 243 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 HI +S LE + Y+ I DEL +YN L ++ +++ +++D + ++ LA K +LA Sbjct: 244 HILDMSELEGRDPYEDYKTINDELESYNLRLMERPQLIVANKMDMPEAAERLAEFKEKLA 303 Query: 298 TQC---GQVP--FEFSSITGHGIPQIL 319 ++P FE S +T G+ +L Sbjct: 304 ADLEADQEMPEIFEVSGLTKTGLQGLL 330 >gi|302528912|ref|ZP_07281254.1| obg family GTPase CgtA [Streptomyces sp. AA4] gi|302437807|gb|EFL09623.1| obg family GTPase CgtA [Streptomyces sp. AA4] Length = 507 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 138/337 (40%), Positives = 207/337 (61%), Gaps = 9/337 (2%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D A +++ +GDGG G S REKF GGPDGG+GG GGDV + +N++TL+DF + Sbjct: 4 RFVDRAVIHLTAGDGGNGCASVHREKFKPLGGPDGGNGGNGGDVTLVVDANVHTLLDFHF 63 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H +A +G+ GM NR+GA GE + + VP GT VF EDG L+ DL G R + A GG Sbjct: 64 RPHARAGNGKMGMGSNRNGAAGEGLEMKVPPGTVVFTEDG-ELVADLTTPGTRFVAAQGG 122 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+ + + L+L+ +AD+G++G P+AGKS+ ++ ++ Sbjct: 123 RGGLGNAALASKARKAPGFALLGEPGESRNLVLELRSVADVGLLGFPSAGKSSLISVLSA 182 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG++ G F +AD+PG+I A +G G+G FL+H ER VL+ Sbjct: 183 AKPKIADYPFTTLVPNLGVITAGSSVFTMADVPGLIPGASEGRGLGLDFLRHIERCAVLV 242 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNSELRKKIE----IVGLSQIDTVDSDTLARKK 293 H+V + LE + + + +EL+ Y L K+E +V L++ID ++ LA Sbjct: 243 HVVDCATLEPGRDPLSDVDALEEELARYTPGLGGKLEERPRVVVLNKIDIPEAAELAEFV 302 Query: 294 NELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G FE S+ + G+ ++ L + + + R Sbjct: 303 RPDLEARGLRVFEVSTASRKGLKELTFALAEVVEAYR 339 >gi|322391838|ref|ZP_08065303.1| Spo0B-associated GTP-binding protein [Streptococcus peroris ATCC 700780] gi|321145318|gb|EFX40714.1| Spo0B-associated GTP-binding protein [Streptococcus peroris ATCC 700780] Length = 436 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 206/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + ++ DL GQ I+A GG Sbjct: 64 RHFKAQSGEKGMTKGMHGRGAEDLIVHVPQGTTVRDAETGKILTDLVHHGQEFIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTQSGDSFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ + Y+ I EL +YN L ++ +I+ +++D DS + L K +LA Sbjct: 244 HVIDMSASEGRGPYEDYLAINKELESYNLRLMERPQIIVANKMDMPDSQENLEDFKKKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 304 ANYDEFEELPTIFPISGLTKQGLAPLLDA 332 >gi|260495092|ref|ZP_05815221.1| obg family GTPase CgtA [Fusobacterium sp. 3_1_33] gi|260197535|gb|EEW95053.1| obg family GTPase CgtA [Fusobacterium sp. 3_1_33] Length = 428 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 141/334 (42%), Positives = 212/334 (63%), Gaps = 4/334 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + +++G+GG G +FRREKF++FGGPDGG GG+GGDV A SN+NTLIDF+++ Sbjct: 2 FIDEVIITVKAGNGGDGSAAFRREKFVQFGGPDGGDGGKGGDVIFIADSNINTLIDFKFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA +GE G K+ G KGED+++ VPVGTQV + LI D+ G++ +L GG Sbjct: 62 KLFKAGNGENGQKKQMYGKKGEDLIIKVPVGTQVRDFTTGKLILDMSVNGEQRVLLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN HFK+S +AP A G G E + L+LKL+AD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGYGNVHFKNSIRKAPKIAEKGGEGAEIKVKLELKLLADVALVGYPSVGKSSFINKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K+ Y FTTL P LG+V+ E K F++ADIPG+I+ AH+G G+GD+FL+H ER ++ Sbjct: 182 NSKVGSYHFTTLEPKLGVVRLEEGKSFVIADIPGLIEGAHEGVGLGDKFLRHIERCKMIY 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 HIV A E + ++ I EL ++ +L K +IV +++D + K + T Sbjct: 242 HIVDAAEIEGRDCIEDFEKINYELKKFSEKLAHKKQIVIANKMDLIWDMKKYNKFKDYLT 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + G + S + G+ ++L +D + I E Sbjct: 302 EKGIEIYPVSVLLNEGLKEVLYKTYDMLSHIERE 335 >gi|330954232|gb|EGH54492.1| GTPase CgtA [Pseudomonas syringae Cit 7] Length = 353 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 116/267 (43%), Positives = 173/267 (64%), Gaps = 8/267 (2%) Query: 59 FRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 +RY +HF A+ G G + +G KGE++VL VPVGT + + +I DL ++GQR+++A Sbjct: 5 YRYTRHFDAERGSNGGSADCTGRKGEELVLRVPVGTTIIDATTQEIIGDLTKDGQRLMVA 64 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG G GN FKSSTN+AP PG G ++ + L+LK++AD+G++GLPNAGKSTF+ S Sbjct: 65 QGGWHGLGNTRFKSSTNRAPRQTTPGKPGDQRDLKLELKVLADVGLLGLPNAGKSTFIRS 124 Query: 179 VTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 V+ AKPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A GAG+G RFLKH RT Sbjct: 125 VSAAKPKVADYPFTTLVPNLGVVSVDRWKSFVVADIPGLIEGASDGAGLGIRFLKHLART 184 Query: 238 HVLLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 +LLH+V E + A + I++EL ++ L ++ + L++ D + + +K Sbjct: 185 RLLLHLVDMAPLDESSAPDAAEVIVNELEKFSPSLAERDRWLVLNKCDQILEEEQEARKQ 244 Query: 295 ELATQ---CGQVPFEFSSITGHGIPQI 318 E+ + G V + S+I G Q+ Sbjct: 245 EIVDRLEWTGPV-YVISAIAKEGTEQL 270 >gi|325693960|gb|EGD35878.1| Spo0B-associated GTP-binding protein [Streptococcus sanguinis SK150] Length = 436 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 142/329 (43%), Positives = 209/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIQVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GEKGM + G ED+++ VP GT V + + ++ DL + Q I+A GG Sbjct: 64 RHFKAQSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETGKVLTDLVENCQEFIVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELLLELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTHSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESAENLKVFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+T G+ +L+ Sbjct: 304 ANYDEFAELPQIFPISSLTKQGLATLLDA 332 >gi|294791360|ref|ZP_06756517.1| GTP-binding protein [Scardovia inopinata F0304] gi|294457831|gb|EFG26185.1| GTP-binding protein [Scardovia inopinata F0304] Length = 566 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 131/344 (38%), Positives = 199/344 (57%), Gaps = 16/344 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V++R G+GG G S RREK+ GP+GG GG GG V + A N +L+++R+ Sbjct: 18 FVDRVTVHVRGGNGGDGAASIRREKYKPLAGPNGGDGGDGGSVIVLADPNTTSLLNYRFA 77 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE---EDGISLICDLDQEGQRIILAP 119 H AQ+G G ++ GA G DV+L VP GT VF+ + + DL G +++A Sbjct: 78 PHRTAQNGTMGKGDDKDGASGADVILPVPPGTVVFDVSNHKKETFLADLRHCGDTVVVAQ 137 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG GN + +AP +A G GQE+ + +LK IAD+ ++G P+AGKS+ +AS+ Sbjct: 138 GGAGGLGNRSLANKARRAPGFALLGEPGQERDVVFELKSIADVALVGYPSAGKSSLIASM 197 Query: 180 TRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 + A+PKIADYPFTTL PNLG+VK K F +AD+PG+I A QG G+G FL+H ERT V Sbjct: 198 SAARPKIADYPFTTLVPNLGVVKADDKVFTVADVPGLIPGAAQGKGLGLEFLRHIERTGV 257 Query: 240 LLHIV--SALEENVQ--AAYQCILDELSAYNSEL---------RKKIEIVGLSQIDTVDS 286 ++H++ + LE + + YQ + ELS Y L + + ++ L++ID ++ Sbjct: 258 IVHVIDCATLEPDRDPLSDYQALEKELSHYEQALQLPLGAIAIKDRPRVIVLNKIDLPEA 317 Query: 287 DTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 LA + G S+ + G+ ++ L D + ++R Sbjct: 318 RELAEFVKPSFEKMGLTTVLVSTASHEGLRELTFVLSDLVQTMR 361 >gi|304407524|ref|ZP_07389176.1| GTP-binding protein Obg/CgtA [Paenibacillus curdlanolyticus YK9] gi|304343475|gb|EFM09317.1| GTP-binding protein Obg/CgtA [Paenibacillus curdlanolyticus YK9] Length = 439 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 131/325 (40%), Positives = 209/325 (64%), Gaps = 8/325 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK++++ GDGG G +S+RRE ++ GGP GG GGRGG+V + L TL+DFRYQ Sbjct: 2 FVDKAKIFVKGGDGGNGIVSYRRELYVPDGGPAGGDGGRGGNVIFRVDEGLRTLVDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE+G + GA +D+++ +P GT + ++D ++I D+ + GQ +I+A GG Sbjct: 62 KHFKAKPGERGKVKGMHGAGADDMIVRIPPGTVIVDDDSQAIIADMTRHGQEVIIARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++ N AP + G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNMRFATANNPAPDISENGEEGEERWVVLELKVMADVGLVGFPSVGKSTLLSVVSGA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V G + F++AD+PG+I+ A +G G+G FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTITPNLGVVDVGDDRNFVMADLPGLIEGASEGVGLGHEFLRHVERTRVII 241 Query: 242 HIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLARKKNELA 297 H++ + + I EL YN +L ++ +I+ +++D +D L K +LA Sbjct: 242 HVIDMAATEGRDPFDDWVKINAELKQYNEKLAERPQIIAANKMDMPGADEQLELFKEQLA 301 Query: 298 TQCGQVPFE---FSSITGHGIPQIL 319 G ++ SS+T G+ +L Sbjct: 302 EVAGDRHYDIIPMSSLTRQGVQDLL 326 >gi|300853927|ref|YP_003778911.1| putative obgE, GTPase [Clostridium ljungdahlii DSM 13528] gi|300434042|gb|ADK13809.1| predicted obgE, GTPase [Clostridium ljungdahlii DSM 13528] Length = 424 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 141/336 (41%), Positives = 211/336 (62%), Gaps = 5/336 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK+++ SGDGG G ISFRREK++ FGGPDGG GG+GGDV + + TL+DF Y+ Sbjct: 2 FVDTAKIFVTSGDGGDGSISFRREKYVAFGGPDGGDGGKGGDVILVVDTESTTLLDFAYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + ++A+ GE G G G+D+ + VP+GT V + ++ DL + I+A GG Sbjct: 62 KKYRAEKGENGAGSKCFGRNGKDLYIKVPMGTVVKDVKTNKIMADLAHPEDKCIVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + QAP +A PG+ G+E+ I L+LKL+AD+G++G PN GKST L+ VT+A Sbjct: 122 GGRGNVRFTTPVRQAPDFAEPGMPGEERYISLELKLLADVGLLGFPNVGKSTLLSIVTKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 PKIA+Y FTTL PNLG+ G K F++ADIPGII+ A +G G+G FL+H +RT +L+ Sbjct: 182 TPKIANYHFTTLSPNLGVTNISGIKSFVIADIPGIIEGAAEGVGLGIEFLRHIQRTRLLI 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V S +E + + I +EL Y+ +L K +I+ ++ D + + L + Sbjct: 242 HVVDISGIEGRDAFDDFTKINNELKKYDVKLWDKPQIIAANKSDMLYDNELFENFRKKVG 301 Query: 299 QCG-QVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 Q G F+ S+ TG G+ ++++ + +I EN Sbjct: 302 QLGYDKVFKISAATGQGVKELMKEAARILSTIPVEN 337 >gi|33239698|ref|NP_874640.1| GTPase ObgE [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|81835866|sp|Q7VDW9|OBG_PROMA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|33237223|gb|AAP99292.1| Predicted GTPase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 329 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 216/329 (65%), Gaps = 5/329 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ +++G GG G ++FRREK++ GGP GG GG GG+V QA SNL TL+DF+ Sbjct: 1 MQFIDQARITVKAGRGGDGIVAFRREKYVPAGGPSGGDGGNGGNVVFQADSNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++Q A++G +G +GA G ++VL VP GT+V + + DL +G+ +++A G Sbjct: 61 FKQIILAENGRRGGPNKCTGASGNNIVLKVPCGTEVRHLETGIIFGDLTIDGESLVVAFG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S+ N+AP G G+E ++ L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GIGGLGNAHYLSNRNRAPEKFTEGKDGEEWLLHLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V++ + + ADIPG+I+ A +G G+G FL+H ERT + Sbjct: 181 SARPKIADYPFTTLIPNLGVVRKPSGDGTVFADIPGLIEGAAEGIGLGHEFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V A N + + +ELSAY L + I+ L++ + +D+ L + + +L Sbjct: 241 LIHLVDASALNPLEDIEIVENELSAYGHSLIDRPRILVLNKKELLDAKNLKKLERKLNQG 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFS 328 S+I +G L+ L +KI+S Sbjct: 301 SISEVISISAIMSNG----LDILLNKIWS 325 >gi|167622847|ref|YP_001673141.1| GTPase ObgE [Shewanella halifaxensis HAW-EB4] gi|261263082|sp|B0TUI2|OBG_SHEHH RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|167352869|gb|ABZ75482.1| GTP-binding protein Obg/CgtA [Shewanella halifaxensis HAW-EB4] Length = 387 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 147/342 (42%), Positives = 221/342 (64%), Gaps = 10/342 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G+GG+G +SFRREK++ GGPDGG GG GG V++QA NLNTLI F+ Sbjct: 1 MKFVDEAIIRVEAGNGGSGCVSFRREKYVPDGGPDGGDGGDGGSVYLQADENLNTLITFQ 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ G+ G R+ +G GED++L VPVGT+ + D + DL GQ++++A G Sbjct: 61 FERFHIAERGKNGRGRDCTGHGGEDLILKVPVGTRAIDNDTEESLGDLTTHGQKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSTNRAPRQKTLGTDGEVRSLKLELLLLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +AKPK+ADYPFTTL PNLG+V + F++ADIPG+I+ A GAG+G +FLKH ER V Sbjct: 181 KAKPKVADYPFTTLVPNLGVVNPRPGQSFVIADIPGLIEGAADGAGLGVQFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHI+ + V++A + I+ EL ++ +L K + +++ D + + L + + Sbjct: 241 LLHILDVEPIDGSDPVESA-RAIVGELEKHSPKLAGKPRWLVINKADLMLEEELQERIDH 299 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + + G V + S+ G ++ L D I S+ E E Sbjct: 300 IVKELEWDGDV-YTISAYNREGTAELAVKLLDFIASLPPEEE 340 >gi|219848554|ref|YP_002462987.1| GTP-binding protein Obg/CgtA [Chloroflexus aggregans DSM 9485] gi|261266721|sp|B8GA36|OBG_CHLAD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|219542813|gb|ACL24551.1| GTP-binding protein Obg/CgtA [Chloroflexus aggregans DSM 9485] Length = 439 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 142/322 (44%), Positives = 201/322 (62%), Gaps = 4/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+A + +R+G+GG G +FRREK++ GGP+GG GGRGG V++ A NTL+ FRYQ Sbjct: 7 FFDQATIVVRAGNGGNGAATFRREKYVPRGGPNGGDGGRGGHVYLIADPEYNTLLHFRYQ 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEE-DGISLICDLDQEGQRIILAPGG 121 + F A++G G K G G DV + VP GT V +G++ DL + GQR++ A GG Sbjct: 67 RKFVAENGGHGGKNAMHGRNGADVYVPVPPGTVVRATINGVTYTVDLARPGQRLLAARGG 126 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN HF + T QAP A G GQE + L+LK++AD+G++G PNAGKST L+ ++ Sbjct: 127 RGGLGNIHFTTPTRQAPRLAELGEPGQELTLELELKMLADVGLVGFPNAGKSTLLSVISA 186 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A+PKIA YPFTTL PNLGIV+ G + F++ADIPG+I+ AH G G+G FL+H ERT +L+ Sbjct: 187 ARPKIAAYPFTTLTPNLGIVEVGVQRFVVADIPGLIEGAHAGVGLGHDFLRHIERTRLLI 246 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 HI+ A + + Y+ I EL Y EL ++ ++V L++ D + E Sbjct: 247 HIIDAAGVDGRTPWDDYEQINTELRLYQPELAQRKQVVALNKADLPAAQANLPILRERLP 306 Query: 299 QCGQVPFEFSSITGHGIPQILE 320 + F S+ T GI +L+ Sbjct: 307 VAPEDLFVISAATRAGIEPLLQ 328 >gi|254458933|ref|ZP_05072356.1| GTP-binding protein Obg/CgtA [Campylobacterales bacterium GD 1] gi|207084204|gb|EDZ61493.1| GTP-binding protein Obg/CgtA [Campylobacterales bacterium GD 1] Length = 366 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 126/284 (44%), Positives = 183/284 (64%), Gaps = 2/284 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D ++ + SG GG G +SFRREKF+ GGP+GG GG+GGD+W + +N +TL F+ + Sbjct: 2 FTDSVELTVSSGKGGQGCVSFRREKFVLNGGPNGGDGGKGGDIWFKCDNNTHTLSHFQRK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA+ G +G +G G V+ VP GTQ+ + + ++ D+ +GQ GG Sbjct: 62 MHIKAEGGVQGEGSRMTGKSGAKKVIIVPPGTQIIDMETGEVLFDMLVDGQEEKFIEGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKS TNQ P YA PG G+ + I L LKLIADIG++G PN GKST +++V+ A Sbjct: 122 GGLGNTHFKSPTNQRPTYAQPGEQGETRAIKLDLKLIADIGLVGFPNVGKSTLISTVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IA+Y FTTL P LG V G ++ F++ADIPGII AH+G G+G +FL+H ERT LL Sbjct: 182 RPEIANYEFTTLTPKLGQVNIGDFESFVMADIPGIIGGAHEGKGLGIQFLRHIERTKTLL 241 Query: 242 HIVS-ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 ++V A +++ + DE+S+++ L + L+++D V Sbjct: 242 YMVDLASYRDLKEQIDTLKDEISSFSENLGNNKYAIALTRVDIV 285 >gi|166154629|ref|YP_001654747.1| GTPase ObgE [Chlamydia trachomatis 434/Bu] gi|166155504|ref|YP_001653759.1| GTPase ObgE [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335896|ref|ZP_07224140.1| GTPase ObgE [Chlamydia trachomatis L2tet1] gi|261266727|sp|B0B7Y8|OBG_CHLT2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266729|sp|B0BC53|OBG_CHLTB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|165930617|emb|CAP04114.1| putative nucleotide-binding protein [Chlamydia trachomatis 434/Bu] gi|165931492|emb|CAP07068.1| putative nucleotide-binding protein [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 335 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 133/332 (40%), Positives = 207/332 (62%), Gaps = 8/332 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ + +R+G GG G +++R+EK++ GGP GG+GG GG + I+ +N+ + ++R Sbjct: 2 FVDQITLELRAGKGGNGVVAWRKEKYLPKGGPYGGNGGNGGSILIETVTNMYSFEEYRNL 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KA G+ G NR+G G+D+VL VP GT + + LI D ++G+RI++ GG Sbjct: 62 RFLKADDGQAGASNNRTGRNGKDLVLKVPEGTLLRDAATGELIHDFTKDGERIVVCQGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK+STN+AP A PG G+ +++ L+LKLIADIG++G PNAGKST ++ R Sbjct: 122 GGKGNVFFKTSTNRAPTKATPGKPGEIRLVELELKLIADIGLVGFPNAGKSTLFNTLART 181 Query: 183 KPKIADYPFTTLYPNLGIV-KEGY---KEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 + K+ YPFTTL+P+LG+V +EG K +I+ADIPGII+ A Q G+G FL+H ERT Sbjct: 182 EVKVGAYPFTTLHPSLGLVHQEGMLYQKTWIMADIPGIIEGASQNRGLGLDFLRHIERTR 241 Query: 239 VLLHI--VSALEENV-QAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 +LL + +S +E + + + ++ EL AY EL+ K ++ L++ID + D + Sbjct: 242 LLLFVIDISGIERHSPEQDLKILMGELLAYKEELKDKDMVIALNKIDQLLPDEREERVAL 301 Query: 296 LATQCGQVPF-EFSSITGHGIPQILECLHDKI 326 L Q F S +TG G+ + + K+ Sbjct: 302 LKQQFPDQEFILLSGLTGEGVDALYDLFKSKL 333 >gi|47459257|ref|YP_016119.1| GTPase ObgE [Mycoplasma mobile 163K] gi|81828460|sp|Q6KHM2|OBG_MYCMO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|47458586|gb|AAT27908.1| putative GTP-binding protein [Mycoplasma mobile 163K] Length = 422 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 131/298 (43%), Positives = 197/298 (66%), Gaps = 8/298 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE ++ +R G GG G ISFRRE + GGPDGG GG+GGD++ + +NTL+D + Sbjct: 1 MKFIDEVELELRGGKGGDGAISFRREAHVANGGPDGGDGGKGGDIYFRPNYGINTLLDLQ 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ +A+ GE G ++N+ G ED ++ VP GT V+E D LI D+ +E +I+ G Sbjct: 61 FRKIIRAEDGENGKRKNQYGKGAEDTIIEVPFGTLVYEND--KLIEDIVEERDYLIVK-G 117 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN FK+ N AP+ G G++K + L+L+++ADIG++GLP+AGKST L+ ++ Sbjct: 118 GQGGRGNLKFKTPRNGAPFMNENGSFGEKKRLRLQLQILADIGLVGLPSAGKSTLLSVLS 177 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKI DY FTTL P LG+VK + +AD+PG+IK A +G G+G +FLKH ER V+ Sbjct: 178 NAKPKIGDYDFTTLSPQLGLVKSSDSSYTIADLPGLIKGASEGKGLGIQFLKHIERCRVI 237 Query: 241 LHIVS--ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT---LARKK 293 HI+ + ++N AY+ IL+EL Y+ L ++ +++ ++ D D +T L RKK Sbjct: 238 AHIIDFGSKDKNPINAYEQILEELRLYDETLLERTQLIIANKEDLEDFETNLNLFRKK 295 >gi|288802944|ref|ZP_06408380.1| Obg family GTPase CgtA [Prevotella melaninogenica D18] gi|302345143|ref|YP_003813496.1| Obg family GTPase CgtA [Prevotella melaninogenica ATCC 25845] gi|288334461|gb|EFC72900.1| Obg family GTPase CgtA [Prevotella melaninogenica D18] gi|302149053|gb|ADK95315.1| Obg family GTPase CgtA [Prevotella melaninogenica ATCC 25845] Length = 389 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 135/322 (41%), Positives = 207/322 (64%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + R K+ GGPDGG GG+GG V+++ N TL+ ++Q Sbjct: 5 FVDYVKIYCRSGKGGRGSMHLRHVKYNPNGGPDGGDGGKGGSVYLRGNHNYWTLLHLKFQ 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G + G G+D+ + VP GT ++ + +CD+ +GQ ++L GG Sbjct: 65 RHIYAEHGGNGGRDKCHGTDGKDIYIDVPCGTVAYDAETGKYVCDVMHDGQTVLLLKGGR 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F+++TNQAP YA PG QE + L+LKL+AD+G++G PNAGKST L+S++ A Sbjct: 125 GGLGNFQFRTATNQAPRYAQPGEPMQEMTVILELKLLADVGLVGFPNAGKSTLLSSLSSA 184 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTT+ P+LGIV + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 185 KPKIANYPFTTMEPSLGIVSYRDNQSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 244 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L T Sbjct: 245 FMVPGDTDDIKREYEVLLNELQQFNPEMLDKHRVLAVTKSDLLDDELIEMLRETLPT--- 301 Query: 302 QVPFEF-SSITGHGIPQILECL 322 +P F S++TG GI + + L Sbjct: 302 DLPVVFISAVTGQGIDDLKDIL 323 >gi|284006657|emb|CBA71919.1| GTP-binding protein [Arsenophonus nasoniae] Length = 388 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 138/296 (46%), Positives = 206/296 (69%), Gaps = 14/296 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEAK+ + +GDGG G +SFRREK+I GGPDGG GG GGDV++ A NLNTLID+R Sbjct: 1 MKFVDEAKILVIAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLLADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ F+A+ G+ G R+ +G +G+D + VP+GT++ + ++ D+ + GQR+++A G Sbjct: 61 FETIFRAERGQNGQSRDCTGKRGQDNTIKVPIGTRIRDFSTSEIVGDMTRHGQRLMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSVNRAPRQKTMGTKGETRELLLELMLLADVGMLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+ADYPFTTL P+LG+V+ + + F++ADIPG+I A +GAG+G RFLKH ER + Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDSEQSFVIADIPGLIAGAAEGAGLGIRFLKHLERCTI 240 Query: 240 LLHIV-------SALEENVQAAYQCILD-ELSAYNSELRKKIEIVGLSQIDTVDSD 287 LLH++ S ENV+ I+D EL Y+ +L +K + +++D + ++ Sbjct: 241 LLHLIDICPIDGSDPVENVK-----IIDAELEKYSEKLSQKPRWLVFNKVDLLTTE 291 >gi|317507080|ref|ZP_07964842.1| obg family GTPase CgtA [Segniliparus rugosus ATCC BAA-974] gi|316254623|gb|EFV13931.1| obg family GTPase CgtA [Segniliparus rugosus ATCC BAA-974] Length = 493 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 134/312 (42%), Positives = 189/312 (60%), Gaps = 15/312 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D V++ +G GG G S REKF GGPDGG+GG GG V + +S +TL+DF + Sbjct: 3 RFIDRVVVHVSAGSGGHGCSSIHREKFKPLGGPDGGNGGHGGSVVFEVSSQAHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H KAQ G+ GM NR+GA+GED+VL VP GT VF+ G + DL EG R ++A GG Sbjct: 63 HPHIKAQDGKMGMGSNRNGARGEDLVLPVPSGTVVFDARG-EFVADLTGEGTRFVVAEGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+ L+L+ +AD+G+IG PNAGKS+ + +++ Sbjct: 122 RGGLGNAALVSKARKAPGFALLGEEGETGDFTLELRSVADVGLIGYPNAGKSSLIGALSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A +G G+G FL+H +R VL+ Sbjct: 182 AKPKIADYPFTTLVPNLGVVSSGDTTFTVADVPGLIPGAAEGKGLGLDFLRHVDRCAVLV 241 Query: 242 HIVSALE----ENVQAAYQCILDELSAYNSELRKKI---------EIVGLSQIDTVDSDT 288 H++ + + ++ + EL+AY L + I L++ID D+ Sbjct: 242 HVLDCATLDSGRDPVSDFEAVEQELAAYKPALDTDLGLGDLLGRPRIAVLNKIDVPDAAD 301 Query: 289 LARK-KNELATQ 299 LA +ELA + Sbjct: 302 LADMVADELAEK 313 >gi|223986039|ref|ZP_03636068.1| hypothetical protein HOLDEFILI_03374 [Holdemania filiformis DSM 12042] gi|223961989|gb|EEF66472.1| hypothetical protein HOLDEFILI_03374 [Holdemania filiformis DSM 12042] Length = 426 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 132/341 (38%), Positives = 209/341 (61%), Gaps = 11/341 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ +++G+GG G ++FRREK++ GGP GG GG GGD+ +A SN +TL+D RY Sbjct: 2 FIDRVKMKLKAGNGGNGLVAFRREKYVPLGGPAGGDGGDGGDIIFEADSNKSTLLDLRYS 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + A +G G + GA G+DV++ VP+GT V + LI DL + GQR ++A GG Sbjct: 62 KQLTAGNGGVGKPKKMHGADGDDVLVKVPLGTLVKDLATGGLIADLTKPGQRAVIAKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S+ N AP Y G G+ K I ++LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNWHFASARNSAPEYCEQGEDGEAKEIQVELKLLADVGLVGFPSVGKSTLLSVVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IADYPFTT+ PNLG+V+ + F++AD+PG+I+ A +G G+G +FL+H ER V++ Sbjct: 182 RPEIADYPFTTITPNLGMVQVPDGRSFVMADLPGLIEGASEGKGLGHQFLRHIERCRVIV 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V + + Y+ I EL Y L ++ ++V +++D ++ ++ E Sbjct: 242 HVVDMGANDGRDPIEDYRIINKELEQYELRLMERPQVVLANKMDLEGAEENLKRFKETYP 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKI-----FSIRGENE 334 P ++ G+ ++L + D + F + GE E Sbjct: 302 DIPVYP--VITLIAEGLDEVLYKVADLLETTPEFPMTGETE 340 >gi|291544517|emb|CBL17626.1| Obg family GTPase CgtA [Ruminococcus sp. 18P13] Length = 425 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 138/331 (41%), Positives = 208/331 (62%), Gaps = 13/331 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK+ I++GDGG G +SF REK++ GGPDGG GG+GGDV N +TLIDFRY+ Sbjct: 2 FVDKAKIKIKAGDGGDGAVSFHREKYVAAGGPDGGDGGKGGDVVFVVDDNFSTLIDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ G+ G RN +G +D+++ VP GT V + L+ DL + + ILA GG Sbjct: 62 RKYVAERGQDGSSRNCTGKAAKDLIIKVPRGTIVRDAQSGRLLADLSTDEPQ-ILAHGGR 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +F ++T Q P +A PG G+E + L+LKL+AD+G++G PN GKST ++ V+ A Sbjct: 121 GGKGNQNFATATRQIPRFAKPGYPGEELEVILELKLLADVGLVGFPNVGKSTLISVVSAA 180 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL P LG+VK + F++ADIPG+I+ A +G G+G FL+H ER ++L Sbjct: 181 KPKIANYHFTTLTPVLGVVKIAQERSFVMADIPGLIEGASEGVGLGHEFLRHVERCRLIL 240 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+ VS +E + Y+ I EL+ ++ EL + +IV ++ D + + R + + Sbjct: 241 HVLDVSGVEGRDPIEDYKIINRELANFSEELAECPQIVAANKADMATEEQIQRLRTFIEG 300 Query: 299 QCGQVPFEFSSITGHG-------IPQILECL 322 + G F S+ T G + ++LE L Sbjct: 301 E-GHHFFVISAATTQGTDALVQDVARVLETL 330 >gi|154174924|ref|YP_001408821.1| GTPase ObgE [Campylobacter curvus 525.92] gi|261266709|sp|A7H029|OBG_CAMC5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|112803670|gb|EAU01014.1| GTP-binding protein Obg/CgtA [Campylobacter curvus 525.92] Length = 376 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 134/301 (44%), Positives = 199/301 (66%), Gaps = 4/301 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D + + SG GGAG +SFRREK + GGPDGG GG GGDV++ A +N +TL ++ + Sbjct: 2 FIDSVNLTLSSGHGGAGAVSFRREKHVILGGPDGGDGGDGGDVYLIADNNSHTLAAYKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KAQ+GE G R +G KGE++ L VP GT V++ L+ DL +E +R++ GG Sbjct: 62 RALKAQNGEAGSGRRMTGKKGENLELIVPPGTAVYDAQTNELLADLTKESERVLFLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSS NQAP YA G+ + + + L+LKLIAD+G++G PN GKST +++V+ A Sbjct: 122 GGLGNVHFKSSINQAPEYAQKGLPEETRDVRLELKLIADVGLVGFPNVGKSTLISTVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+V+ + Y F++ADIPGII+ A G G+G +FLKH ERT +LL Sbjct: 182 KPQIANYEFTTLTPKLGLVEVDEYSGFVMADIPGIIEGASDGRGLGLKFLKHIERTKILL 241 Query: 242 HIVS-ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 +++ A +++ + + E+ ++ EL K+ + L+++D ++ L RK E Sbjct: 242 YMLDLANHRSLKEQFVTLRGEVEKFSPELAKRDFAIALTRMDA--AENLERKVGEFLQIL 299 Query: 301 G 301 G Sbjct: 300 G 300 >gi|323141293|ref|ZP_08076189.1| Obg family GTPase CgtA [Phascolarctobacterium sp. YIT 12067] gi|322414250|gb|EFY05073.1| Obg family GTPase CgtA [Phascolarctobacterium sp. YIT 12067] Length = 422 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 214/329 (65%), Gaps = 4/329 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A++Y+ +GDGG G SFRREKF+E GGP+GG+GGRGGDV + A NLNTLIDFRY+ Sbjct: 2 FIDRARIYVEAGDGGDGMSSFRREKFVEKGGPNGGNGGRGGDVVLIADKNLNTLIDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ G +G +N +G + + V + VP+GT V ++ +++ DL ++GQ A GG Sbjct: 62 RKYVAKRGGQGGTKNCTGVRADTVFVKVPMGTLVRDDATGAVMADLVEDGQTYTAAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA + +STN+AP +A G G+ + + L+LKL+AD+G++G P+ GKS+ +A V+ A Sbjct: 122 GGKGNACYVTSTNRAPTFAEKGEPGETRWLKLELKLLADVGLVGYPSVGKSSIIAQVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IA Y FTTL P LG+V+ + + F+LADIPG+I+ AH+G G+G FL+H ERT VLL Sbjct: 182 RPEIAAYHFTTLSPVLGVVRLDEERSFVLADIPGLIEGAHEGVGLGHDFLRHVERTKVLL 241 Query: 242 HIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 HIV N + I EL+ Y+ L ++ ++V +++D ++ + E Sbjct: 242 HIVDVAGVDGRNPIEDFDKINTELAEYSERLARRKQLVVANKMDLPEAQENFERLKEYVE 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIF 327 G + S+ TG G+ +++ +D + Sbjct: 302 AKGYEICKASAATGEGLRELMFKAYDLLL 330 >gi|297621863|ref|YP_003710000.1| GTPase ObgE [Waddlia chondrophila WSU 86-1044] gi|297377164|gb|ADI38994.1| GTPase ObgE [Waddlia chondrophila WSU 86-1044] Length = 328 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 137/324 (42%), Positives = 193/324 (59%), Gaps = 4/324 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + +G GG G +++RREK+I GGP GG+GGRGG V IQA L +L FR + Sbjct: 2 FTDRVSIELAAGKGGNGVVAWRREKYIPKGGPAGGNGGRGGSVIIQADEQLLSLEWFRQR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 HF+A++G++G G G+D++L VP GT V + ++CDL + QR GG Sbjct: 62 FHFRAENGQQGGPNRMQGKSGKDLILKVPCGTLVKDAKTGEILCDLTEPKQRWEACKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA FK+STN+AP PG G+E + L+LKLIAD+G++G PNAGKST ++S+ + Sbjct: 122 GGRGNATFKTSTNRAPNQCTPGKPGEEIAVELELKLIADVGLVGFPNAGKSTLISSLAKV 181 Query: 183 KPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K KIA YPFTTL PNLG I K Y +ADIPGIIK+AH G+G FL+H ERT L+ Sbjct: 182 KVKIAPYPFTTLAPNLGYIEKNDYTRLFIADIPGIIKDAHLDRGLGFEFLRHIERTKFLI 241 Query: 242 HIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ A N +Q + E+ YN L + V L++ID+ ++ ++ Sbjct: 242 FVLDASGIDGRNPSEDFQVLRQEIGKYNPALLDRPYYVVLNKIDSEEAQLHLEHFHKTHR 301 Query: 299 QCGQVPFEFSSITGHGIPQILECL 322 FE S++TG G+ + L Sbjct: 302 IDAAFLFELSALTGEGVEHLKNTL 325 >gi|183508591|ref|ZP_02958104.1| GTP-binding protein Obg/CgtA family protein [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|182676045|gb|EDT87950.1| GTP-binding protein Obg/CgtA family protein [Ureaplasma parvum serovar 14 str. ATCC 33697] Length = 435 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 127/288 (44%), Positives = 184/288 (63%), Gaps = 5/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D+ K+ + +G+GG G +S+RRE + GGP GG+GG GG +W N +L + Sbjct: 1 MAFIDKCKIVLIAGNGGDGIVSWRRETHVPEGGPAGGNGGNGGSIWFVGNHNETSLEFLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ +A+HGEKG +N+ GA EDV + VP+GT V+ + ++ D++ + Q+ ++A G Sbjct: 61 YKKIIRAKHGEKGDIKNQHGANAEDVFINVPLGTVVYNPNTNEILADINIDQQKYLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKS N+AP G LG+ + L+LK IADIGIIGLPNAGKST +++ T Sbjct: 121 GLGGHGNTHFKSPFNKAPNLYELGELGENVEVLLELKTIADIGIIGLPNAGKSTLISTFT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPK A+Y FTTL P LG + I ADIPG+I+ AH G G+G FLKH ER +L Sbjct: 181 NAKPKTANYMFTTLNPVLGTIYRDQNRIIFADIPGLIEGAHTGVGLGHDFLKHIERCFLL 240 Query: 241 LHIVSALEEN----VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 +H++S L+ N + AY+ I++EL Y L K ++ ++ID + Sbjct: 241 IHLIS-LDPNDNPDIINAYETIVNELKQYKQNLVNKPIVLVANKIDQI 287 >gi|222823226|ref|YP_002574799.1| GTP-binding protein, GTP1/Obg family [Campylobacter lari RM2100] gi|261266715|sp|B9KER3|OBG_CAMLR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|222538447|gb|ACM63548.1| GTP-binding protein, GTP1/Obg family [Campylobacter lari RM2100] Length = 347 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 145/346 (41%), Positives = 214/346 (61%), Gaps = 13/346 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ + SG+GG G +SFRREK + GGPDGG GG GGDV+ +N +TL F+ + Sbjct: 2 FIDNVKLVLSSGNGGKGAVSFRREKHVPLGGPDGGDGGNGGDVYFICDNNTHTLAHFKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KAQ+G+ G+ RN++G +GE + L VP GTQV + ++ D+ EGQ+ + GG Sbjct: 62 KELKAQNGQPGLGRNKNGKRGESLELIVPQGTQVIDAQSGEVLLDMLVEGQKELFLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+STNQ P YA G+ G+ + L+LKLIAD+G++G PN GKST ++ V+ A Sbjct: 122 GGLGNTHFKNSTNQRPDYAQSGVAGKTLSVRLELKLIADVGLVGFPNVGKSTLISVVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IA+Y FTTL P LG+V+ + Y F++ADIPGII+ A G G+G FL+H ERT LL Sbjct: 182 RPEIANYEFTTLTPKLGMVEVDDYNSFVMADIPGIIEGASDGRGLGLEFLRHIERTSFLL 241 Query: 242 HIVSALEENVQAAYQCIL-DELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKK----NE 295 ++ L + CIL EL ++S+L + + LS+ D+++ + A+K NE Sbjct: 242 FVLDPLRDMSLKEQFCILRKELEKFSSKLYTRNFGLMLSKSDSINLGEEFAQKMEDDYNE 301 Query: 296 LAT--QCGQVPFEF----SSITGHGIPQILECLHDKIFSIRGENEF 335 L Q P F SS+ G+ ++ L +++ IR +N Sbjct: 302 LKAYLQSQNNPQSFFIKVSSLEKTGLKELKFMLLEEVKKIRNQNNL 347 >gi|187918634|ref|YP_001884199.1| GTPase ObgE [Borrelia hermsii DAH] gi|261266682|sp|B2S1C3|OBG_BORHD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|119861482|gb|AAX17277.1| GTP-binding protein CgtA [Borrelia hermsii DAH] Length = 327 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 119/278 (42%), Positives = 182/278 (65%) Query: 5 DEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQH 64 D + + SGDGGAG +SF RE+F GGPDGG GGRGGDV + +NL +L ++ Q Sbjct: 6 DSLSITVSSGDGGAGCVSFLRERFNTKGGPDGGDGGRGGDVIFKVKANLKSLSLYKNGQR 65 Query: 65 FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGG 124 A +G+ GM +SGA GED+V+ VP T +++ S++ +L +I GG GG Sbjct: 66 LAANNGKPGMGSRKSGASGEDLVIFVPPNTCIYDVATGSMLFELQNFDDEVIALKGGRGG 125 Query: 125 FGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKP 184 GN HFKSST + P +A PG G + L+L LIADIG++G PNAGKS+ ++++T +K Sbjct: 126 LGNVHFKSSTKRTPRFAQPGESGATLNLRLELSLIADIGLVGFPNAGKSSLISTITASKS 185 Query: 185 KIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 ++A+YPFTT +P+LG++K Y + ++AD+PG+I+ A QG G+G FL+H +T +L+ ++ Sbjct: 186 RVANYPFTTRFPHLGVLKASYNDLVIADVPGLIEGASQGIGLGFEFLRHISKTKILVFLI 245 Query: 245 SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 +N +AY +++ELSAY+ L K I+ +++D Sbjct: 246 DVASDNFMSAYDILVNELSAYDIGLSSKKRIIVANKLD 283 >gi|320535999|ref|ZP_08036061.1| Obg family GTPase CgtA [Treponema phagedenis F0421] gi|320147159|gb|EFW38713.1| Obg family GTPase CgtA [Treponema phagedenis F0421] Length = 375 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 132/299 (44%), Positives = 188/299 (62%), Gaps = 3/299 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 ++F DE+ + + SG GG G I+FRREK++ GGP GG GGRGGDV + N+ TL+ R Sbjct: 2 IRFADESVIRVSSGKGGNGCIAFRREKYVPKGGPSGGDGGRGGDVIFEIKQNMRTLVHLR 61 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDL-DQEGQRIILAP 119 Y++ FKA++G G R GA GED ++ +P G + + + LI D D+ Sbjct: 62 YKRVFKAKNGRDGEGNQRFGANGEDCIIPLPPGCIIKDAETGELIYDFGDKTEGSFTFLK 121 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GGNGG+GN HFK TNQAP A PG G+ + I ++L +IADIG++G PNAGKS+ L Sbjct: 122 GGNGGWGNCHFKGPTNQAPRTALPGQEGETRSIKVELNIIADIGLVGFPNAGKSSLLDFF 181 Query: 180 TRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 T A+PKIA YPFTT PNLG++ + ++ ILADIPGII+ A G G+G RFLKH RT Sbjct: 182 TNARPKIAPYPFTTKIPNLGVLHIDDERDIILADIPGIIEGASDGVGLGFRFLKHISRTA 241 Query: 239 VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL 296 L ++ ++N AY + EL+A++ EL K ++ +++D D+ + LA + +L Sbjct: 242 GLAFLIDLSDDNYLDAYTVLSKELAAFSEELAAKKRVIIATKLDLPDTKERLAELRKKL 300 >gi|322412048|gb|EFY02956.1| GTPase ObgE [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 435 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 140/332 (42%), Positives = 209/332 (62%), Gaps = 10/332 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 2 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 62 RKFKAKSGEKGMTKGMHGRGSEDLIIAVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 242 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQENLKAFKEKLA 301 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILECLHD 324 Q + +P F SS+ G+ +LE D Sbjct: 302 AQYDEFDDLPMIFPISSLAHQGLDNLLEATAD 333 >gi|270292879|ref|ZP_06199090.1| Spo0B-associated GTP-binding protein [Streptococcus sp. M143] gi|270278858|gb|EFA24704.1| Spo0B-associated GTP-binding protein [Streptococcus sp. M143] Length = 436 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 143/329 (43%), Positives = 209/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GEKGM + G ED+ + VP GT V + + +I DL + GQ I+A GG Sbjct: 64 RHFKAESGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVITDLIEHGQEFIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HIV SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 244 HIVDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLKTFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 304 ANYDEFEELPAIFPISGLTKQGLATLLDA 332 >gi|223038751|ref|ZP_03609044.1| Obg family GTPase CgtA [Campylobacter rectus RM3267] gi|222880153|gb|EEF15241.1| Obg family GTPase CgtA [Campylobacter rectus RM3267] Length = 409 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 130/286 (45%), Positives = 190/286 (66%), Gaps = 2/286 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D + + SG GGAG +SFRREK + GGPDGG GG GGDV+ A +N +TL ++ + Sbjct: 2 FIDSVNLTLSSGHGGAGSVSFRREKHVILGGPDGGDGGDGGDVYFVADNNTHTLAAYKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +AQ+GE GM R G +GE + L VP GT V + + L+CDL +GQR + GG Sbjct: 62 KALRAQNGEAGMGRRMHGKRGEHLELIVPPGTAVLDAETGELLCDLTSQGQRELFLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSS NQAP YA G+ G+ + + L+LKLIAD+G++G PN GKST +++V+ A Sbjct: 122 GGLGNVHFKSSINQAPEYAQKGLEGETREVRLELKLIADVGLVGFPNVGKSTLISTVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+V+ + Y F++ADIPGI A +G G+G +FLKH ERT +LL Sbjct: 182 KPQIANYEFTTLTPKLGLVEVDEYSGFVMADIPGITLGASEGRGLGVQFLKHVERTKILL 241 Query: 242 HIVS-ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 ++ A +++ + + E + ++ EL K+ + L++ D ++ Sbjct: 242 FMLDLANYRSLEEQFDALRAETAKFSGELAKRDYAIALTRADAAEN 287 >gi|118602430|ref|YP_903645.1| small GTP-binding protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|261263061|sp|A1AW67|OBG_RUTMC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|118567369|gb|ABL02174.1| small GTP-binding protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 335 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 131/340 (38%), Positives = 210/340 (61%), Gaps = 11/340 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D A + I +G GGAG + FRREK+I GGPDGG GG GG ++ Q NTL +FR Sbjct: 1 MKFVDSASIRIEAGKGGAGCLGFRREKYIPDGGPDGGDGGDGGHIYFQGQEGFNTLSEFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A++G+ G +N+ G + + + +P+GT++++ + LI ++ + Q I++A G Sbjct: 61 FKRLFRAKNGQPGSGQNKRGKSAQHLTVEIPLGTKIYDLETDELIGEMIEHEQIILVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP PG G+ + I L+L ++ADIG++G+PNAGKS+ + ++ Sbjct: 121 GFHGLGNTRFKSSINRAPRKTTPGSPGEIREIGLELSIMADIGLLGMPNAGKSSLIRQIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AK K+A+YPFTTL+P+LG+V + I+ADIPG+I+NA +G G+G FLKH T L Sbjct: 181 NAKSKVANYPFTTLHPSLGVVSYYDEHIIMADIPGLIENASKGVGLGFEFLKHLFHTKAL 240 Query: 241 LHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKN 294 LH+V + + I EL Y+ +L KK ++ ++++D + D +T+ + Sbjct: 241 LHVVDIFPVDGSDPVENFLTIEKELKKYDQKLAKKPRLLAINKMDLLSGGDRETVVQSLL 300 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + G+V + S++ G G ++ L F + ENE Sbjct: 301 KGTRYNGKV-YRISALNGLGCKNLVAGL----FKLVKENE 335 >gi|256028742|ref|ZP_05442576.1| GTPase ObgE [Fusobacterium sp. D11] gi|289766645|ref|ZP_06526023.1| SPO0B-associated GTP-binding protein [Fusobacterium sp. D11] gi|289718200|gb|EFD82212.1| SPO0B-associated GTP-binding protein [Fusobacterium sp. D11] Length = 428 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 141/334 (42%), Positives = 212/334 (63%), Gaps = 4/334 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + +++G+GG G +FRREKF++FGGPDGG GG+GGDV A SN+NTLIDF+++ Sbjct: 2 FIDEVIITVKAGNGGDGSAAFRREKFVQFGGPDGGDGGKGGDVVFVADSNINTLIDFKFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA +GE G K+ G KGED+++ VPVGTQV + LI D+ G++ +L GG Sbjct: 62 KLFKAGNGENGQKKQMYGKKGEDLIIKVPVGTQVRDFITGKLILDMSVNGEQRVLLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN HFK+S +AP A G G E + L+LKL+AD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGYGNIHFKNSIRKAPKIAEKGGEGAEIKVKLELKLLADVALVGYPSVGKSSFINKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K+ Y FTTL P LG+V+ E K F++ADIPG+I+ AH+G G+GD+FL+H ER ++ Sbjct: 182 NSKVGSYHFTTLEPKLGVVRLEEGKSFVIADIPGLIEGAHEGVGLGDKFLRHIERCKMIY 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 HIV A E + ++ I EL ++ +L K +IV +++D + K + T Sbjct: 242 HIVDAAEIEGRDCIEDFEKINYELKKFSEKLAHKKQIVIANKMDLIWDMKKYNKFKDYLT 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + G + S + G+ ++L +D + I E Sbjct: 302 EKGIEIYPVSVLLNEGLKEVLYKTYDMLCHIERE 335 >gi|289550591|ref|YP_003471495.1| putative GTP-binding protein Obg [Staphylococcus lugdunensis HKU09-01] gi|289180123|gb|ADC87368.1| putative GTP-binding protein Obg [Staphylococcus lugdunensis HKU09-01] Length = 430 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 133/333 (39%), Positives = 208/333 (62%), Gaps = 7/333 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVIFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE G N G ED++L VP GT + + ++ DL ++GQR ++A GG Sbjct: 62 RHFKAKKGENGQSSNMHGRNAEDLILKVPPGTIIKNVETEEVLADLVEDGQRAVVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSENGEPGEELDVTLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDQRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S E + Y I EL Y L ++ +I+ +++D + D L + ++ +A Sbjct: 242 HMIDMSGSEGRDPFNDYHVINQELINYQQRLEERPQIIVANKMDVPGAQDNLQKFEDSIA 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +P S+IT I +L + DK+ ++ Sbjct: 302 ADIMVIP--VSTITRDNIDTLLYAIADKLEEVK 332 >gi|315658086|ref|ZP_07910958.1| obg family GTPase CgtA [Staphylococcus lugdunensis M23590] gi|315496415|gb|EFU84738.1| obg family GTPase CgtA [Staphylococcus lugdunensis M23590] Length = 430 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 133/333 (39%), Positives = 208/333 (62%), Gaps = 7/333 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVIFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE G N G ED++L VP GT + + ++ DL ++GQR ++A GG Sbjct: 62 RHFKAKKGENGQSSNMHGRNAEDLILKVPPGTIIKNVETEEVLADLVEDGQRAVVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSENGEPGEELDVTLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDQRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S E + Y I EL Y L ++ +I+ +++D + D L + ++ +A Sbjct: 242 HMIDMSGSEGRDPINDYHVINQELINYQQRLEERPQIIVANKMDIPGAQDNLQKFEDSIA 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +P S+IT I +L + DK+ ++ Sbjct: 302 ADIMVIP--VSTITRDNIDTLLYAIADKLEEVK 332 >gi|297812041|ref|XP_002873904.1| GTP1/OBG family protein [Arabidopsis lyrata subsp. lyrata] gi|297319741|gb|EFH50163.1| GTP1/OBG family protein [Arabidopsis lyrata subsp. lyrata] Length = 681 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 136/346 (39%), Positives = 210/346 (60%), Gaps = 13/346 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+ D AK+++++GDGG G ++FRREKF+ FGGP GG GGRGG+V+++ ++N+L+ FR Sbjct: 208 MRCFDRAKIFVKAGDGGNGVVAFRREKFVPFGGPSGGDGGRGGNVYVEVDGSMNSLLPFR 267 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE------------EDGISLICDL 108 HF+A GE G + +SGAKG++VV+ V GT V + + ++ +L Sbjct: 268 KSVHFRAGRGEHGRGKMQSGAKGDNVVVKVAPGTVVRQAREVGSEVEGEEGEEKEVLLEL 327 Query: 109 DQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLP 168 GQR +L PGG GG GNA FKS N+ P A G G E + L+LKL+AD+GI+G P Sbjct: 328 LHPGQRALLLPGGRGGRGNASFKSGMNKVPRIAENGEEGPEMWLDLELKLVADVGIVGAP 387 Query: 169 NAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIG 227 NAGKST L+ ++ A+P IA+YPFTTL PNLG+V Y ++AD+PG+++ AH+G G+G Sbjct: 388 NAGKSTLLSVISAAQPTIANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGAHRGFGLG 447 Query: 228 DRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 FL+HTER L+H+V + ++ + EL ++ E+ +K +V +++D D+ Sbjct: 448 HEFLRHTERCSALVHVVDGSAPQPELEFEAVRLELELFSPEIAEKPYVVAYNKMDLPDAY 507 Query: 288 TLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 E G PF S++ G +++ +++ + R N Sbjct: 508 EKWPMFQETLRARGIEPFCMSAVQRDGTHEVISSVYELLKKYRAAN 553 >gi|296876780|ref|ZP_06900828.1| obg family GTPase CgtA [Streptococcus parasanguinis ATCC 15912] gi|296432282|gb|EFH18081.1| obg family GTPase CgtA [Streptococcus parasanguinis ATCC 15912] Length = 437 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 143/329 (43%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVIFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ+GEKGM + G ED+ + VP GT V + + +I DL + GQ I+A GG Sbjct: 64 RHFKAQNGEKGMTKGMHGRGAEDLYVRVPQGTTVRDAETGKVITDLVENGQEYIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELELELKVLADVGLVGFPSVGKSTLLSVITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTPSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL YN L ++ +I+ +++D +S + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYVQINKELETYNLRLMERPQIIVANKMDMPESQENLKEFKKKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+ G+ +L+ Sbjct: 304 ANYDEFDELPQIFPISSLAHQGLDNLLDA 332 >gi|255325506|ref|ZP_05366608.1| Spo0B-associated GTP-binding protein [Corynebacterium tuberculostearicum SK141] gi|255297444|gb|EET76759.1| Spo0B-associated GTP-binding protein [Corynebacterium tuberculostearicum SK141] Length = 510 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 197/329 (59%), Gaps = 17/329 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++++GDGG G +S REKF GGPDGG+GG GGD+ ++ + ++TL+DF Y Sbjct: 3 RFIDRVVLHLQAGDGGHGCVSVHREKFKPLGGPDGGNGGHGGDIILEVSEQIHTLMDFHY 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H KAQ G G R+GA+GED++L VP GT V E G +L DL G R + A GG Sbjct: 63 RPHIKAQRGANGAGDMRNGARGEDLILEVPAGTVVRTEKGETL-ADLTIPGTRFVAAEGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G GQ + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 YGGLGNAALASKNRKAPGFALQGEPGQAHDLILELKSMADVGLVGFPSAGKSSLISVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKI DYPFTTL PNLG+V G F +AD+PG+I A G G+G FL+H ERT VL Sbjct: 182 AKPKIGDYPFTTLQPNLGVVDMGDSSFTIADVPGLIPGAADGKGLGLDFLRHIERTAVLA 241 Query: 242 HIVSALE--------------ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 H+V EN A YQ L E + +LR++ I+ L++ D +++ Sbjct: 242 HVVDTASIEPGRDPESDIEALENELAKYQEALQEDTGLG-DLRERPRIIILNKADVPEAE 300 Query: 288 TLAR-KKNELATQCGQVPFEFSSITGHGI 315 LA K++L + G F S+ G+ Sbjct: 301 ELAEFVKDDLKEKFGWPVFIISAAARKGL 329 >gi|227504476|ref|ZP_03934525.1| GTPase ObgE [Corynebacterium striatum ATCC 6940] gi|227198929|gb|EEI78977.1| GTPase ObgE [Corynebacterium striatum ATCC 6940] Length = 507 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 138/330 (41%), Positives = 207/330 (62%), Gaps = 19/330 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++++GDGG G S REKF GGPDGG+GG GGD+ ++ ++ ++TL+DF Y Sbjct: 3 RFIDRVVLHLQAGDGGHGCSSVHREKFKPLGGPDGGNGGHGGDILLEVSTQVHTLMDFHY 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H K+ G G R+GA+GED++L VP GT V+ EDG ++ DL G R + A GG Sbjct: 63 RPHLKSGRGNNGAGDWRNGARGEDLILEVPAGTVVYSEDG-EMLADLTVPGTRFVAAEGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S+ +AP +A G G+ + + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 FGGLGNAALASAARKAPGFALQGEPGEARDLVLELKSMADVGLVGFPSAGKSSLISVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKI DYPFTTL PNLG+V G++ F +AD+PG+I A G G+G FL+H ERT VL Sbjct: 182 AKPKIGDYPFTTLQPNLGVVDMGFESFTMADVPGLIPGAADGKGLGLDFLRHIERTAVLA 241 Query: 242 HIVS---------------ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 H+V ALEE + A YQ +LD+ + +LR++ I+ L++ D ++ Sbjct: 242 HVVDVATLEPGRDPLSDIEALEEEL-AKYQELLDQDTGLG-DLRQRPRIIILNKADIREA 299 Query: 287 DTLAR-KKNELATQCGQVPFEFSSITGHGI 315 + LA K EL + G F S++ G+ Sbjct: 300 EELAEFVKPELEEKYGWPVFIISAVARKGL 329 >gi|157960682|ref|YP_001500716.1| GTPase ObgE [Shewanella pealeana ATCC 700345] gi|261263084|sp|A8H0U4|OBG_SHEPA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|157845682|gb|ABV86181.1| GTP-binding protein Obg/CgtA [Shewanella pealeana ATCC 700345] Length = 387 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 146/342 (42%), Positives = 221/342 (64%), Gaps = 10/342 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G+GG+G +SFRREK++ GGPDGG GG GG V++QA NLNTLI ++ Sbjct: 1 MKFVDEAIIRVEAGNGGSGCVSFRREKYVPDGGPDGGDGGDGGSVYLQADENLNTLITYQ 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ A+ G+ G R+ +G GED++L VPVGT+ + D + DL GQ++++A G Sbjct: 61 FERFHIAERGKNGRGRDCTGHGGEDLILKVPVGTRAIDNDTEESLGDLTTHGQKLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSSTN+AP G G+ + + L+L L+AD+G++G+PNAGKSTF+ SV+ Sbjct: 121 GFHGLGNTRFKSSTNRAPRQKTLGTDGEVRSLKLELLLLADVGLLGMPNAGKSTFIRSVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +AKPK+ADYPFTTL PNLG+V + F++ADIPG+I+ A GAG+G +FLKH ER V Sbjct: 181 KAKPKVADYPFTTLVPNLGVVNPRPGQSFVIADIPGLIEGAADGAGLGVQFLKHLERCRV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHI+ + V+AA + I+ EL ++ +L K + +++ D + + L + + Sbjct: 241 LLHILDVEPIDGSDPVEAA-RAIVAELEKHSPKLAGKPRWLVINKADLMLPEELQERIDR 299 Query: 296 LATQC---GQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + + G + + S+ G ++ L D I S+ E E Sbjct: 300 IVKELEWEGDI-YTISAYNREGTAELALKLLDFIDSLPPEEE 340 >gi|255527007|ref|ZP_05393899.1| GTP-binding protein Obg/CgtA [Clostridium carboxidivorans P7] gi|255509317|gb|EET85665.1| GTP-binding protein Obg/CgtA [Clostridium carboxidivorans P7] Length = 424 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 134/323 (41%), Positives = 209/323 (64%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK++I+SGDGG G +FRREK+I GGPDGG GG+GG+V + A N+ TL+DF Y+ Sbjct: 2 FVDTAKIFIKSGDGGDGASTFRREKYIALGGPDGGDGGKGGNVVLVADPNMTTLLDFAYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA+ G G G GE + + VP+GT V + + ++ DL + + ++A GG Sbjct: 62 RKYKAEPGGNGSGSKCFGKDGETLYIKVPMGTVVRDAETSKIMADLSHKEDKYVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + T QAP +A PG+ G+E+ I L+LK++AD+G++G PN GKST L+ V++A Sbjct: 122 GGRGNIRFTTPTRQAPDFAEPGMPGEERWITLELKILADVGLLGFPNVGKSTLLSVVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+Y FTTL PNLG+V G F++ADIPGII+ A +G G+G +FL+H ERT +L+ Sbjct: 182 RPKIANYHFTTLNPNLGVVNMSGIPSFVMADIPGIIEGASEGVGLGIKFLRHIERTRLLI 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V S +E + + I +EL Y+ +L + +I+ ++ D + D + + Sbjct: 242 HVVDISGVEGRDPFEDFLKINEELKKYSVKLWDRPQIIAANKADMLYDDEVFENFKKKVK 301 Query: 299 QCG-QVPFEFSSITGHGIPQILE 320 + G F+ S+ T G+ ++++ Sbjct: 302 ELGYDKVFKISAATNKGVEELIK 324 >gi|317968914|ref|ZP_07970304.1| GTPase CgtA [Synechococcus sp. CB0205] Length = 329 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 142/320 (44%), Positives = 217/320 (67%), Gaps = 1/320 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ +++G GG G +FRREK++ GGP GG GGRGGDVW++A NL TL+DF+ Sbjct: 1 MQFIDQARISLQAGRGGDGIAAFRREKYVPAGGPSGGDGGRGGDVWLEADPNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F A G +G +GA G +V+ VP GT+V + L+ DL ++ QR+++A G Sbjct: 61 YKRLFAADDGRRGGPNKATGASGSPLVIKVPCGTEVRDARTHILLGDLTEKDQRLLVAVG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S+ N+AP G G+E ++ L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GRGGLGNAHYLSNRNRAPEKFTEGRDGEEWLLQLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ + + ADIPG+I A QGAG+G FL+H +RT + Sbjct: 181 SARPKIADYPFTTLVPNLGVVRRPSGDGTVFADIPGLIAGAAQGAGLGHDFLRHIQRTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V A E+V +Q + EL+AY + L ++ +V L++ + + D L + +++ Sbjct: 241 LIHLVDASSEDVLHDFQVVQQELAAYGNGLDERPCLVALNKTELLLEDELEERIQQVSDH 300 Query: 300 CGQVPFEFSSITGHGIPQIL 319 CGQ + S+ T + Q+L Sbjct: 301 CGQPVLDISAATSKNLDQLL 320 >gi|319892697|ref|YP_004149572.1| GTP-binding protein Obg [Staphylococcus pseudintermedius HKU10-03] gi|317162393|gb|ADV05936.1| GTP-binding protein Obg [Staphylococcus pseudintermedius HKU10-03] gi|323464265|gb|ADX76418.1| Spo0B-associated GTP-binding protein ObgE [Staphylococcus pseudintermedius ED99] Length = 430 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 135/322 (41%), Positives = 203/322 (63%), Gaps = 6/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GGRG V Q L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGRGASVVFQVDEGLRTLMDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ G+ G N G E++VL VP GT + + + + DL + GQ ++A GG Sbjct: 62 RHFKAKKGDNGQSSNMHGKNAENLVLKVPPGTIIKDVETGQTLADLVEHGQSAVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPKNPAPDFSENGEPGEEIDVTLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTT+ PNLG+V+ + FI+AD+PG+I+ A +G G+G +FL+H ERT V++ Sbjct: 182 RPKIGAYHFTTIQPNLGVVETRDQRSFIMADLPGLIEGASEGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT-LARKKNELA 297 H++ S +E + YQ I EL AY L + +IV +++D D++ L K +L Sbjct: 242 HVIDMSGMEGRDPYEDYQIINQELKAYAQRLEDRPQIVVANKMDMPDAEAQLEMFKEQLN 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + + SS T I Q+L Sbjct: 302 DETVTI-VPISSYTRENIDQLL 322 >gi|293332295|ref|NP_001168346.1| hypothetical protein LOC100382114 [Zea mays] gi|223947645|gb|ACN27906.1| unknown [Zea mays] Length = 539 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 124/242 (51%), Positives = 171/242 (70%), Gaps = 1/242 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+ D AK++ ++GDGG G ++FRREK++ +GGP GG GGRGGDV++Q +N+L+ FR Sbjct: 290 MRCFDTAKIFAKAGDGGNGVVAFRREKYVPYGGPSGGDGGRGGDVYVQVDGEMNSLLPFR 349 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 HF+A G GM + ++GAKGEDVV+ VP GT V DG + +L + GQR +L PG Sbjct: 350 KSVHFRAGRGAHGMGQQQAGAKGEDVVVKVPPGTVVRTSDGGVELLELMKPGQRALLLPG 409 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FKS TN+ P A G G E + L+LKL+AD+GI+G PNAGKST L+ ++ Sbjct: 410 GRGGRGNAAFKSGTNKVPRIAEKGEKGPEMWLELELKLVADVGIVGAPNAGKSTLLSVIS 469 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKP IA+YPFTTL PNLG+V + ++AD+PG+++ AH+G G+G FL+H+ER V Sbjct: 470 AAKPAIANYPFTTLLPNLGVVSLDFDATMVVADLPGLLEGAHRGYGLGHEFLRHSERCSV 529 Query: 240 LL 241 L+ Sbjct: 530 LV 531 >gi|255348783|ref|ZP_05380790.1| GTPase ObgE [Chlamydia trachomatis 70] gi|255503323|ref|ZP_05381713.1| GTPase ObgE [Chlamydia trachomatis 70s] gi|255507002|ref|ZP_05382641.1| GTPase ObgE [Chlamydia trachomatis D(s)2923] gi|289525460|emb|CBJ14937.1| putative nucleotide-binding protein [Chlamydia trachomatis Sweden2] gi|296435012|gb|ADH17190.1| GTPase ObgE [Chlamydia trachomatis E/150] gi|296438732|gb|ADH20885.1| GTPase ObgE [Chlamydia trachomatis E/11023] Length = 335 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 134/335 (40%), Positives = 209/335 (62%), Gaps = 14/335 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ + +R+G GG G +++R+EK++ GGP GG+GG GG + I+A +N+ + ++R Sbjct: 2 FVDQITLELRAGKGGNGVVAWRKEKYLPKGGPYGGNGGNGGSILIEAVTNMYSFEEYRNL 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KA G+ G NR+G G+D+VL VP GT + + LI D ++G+RI++ GG Sbjct: 62 RFLKADDGQAGASNNRTGRNGKDLVLKVPEGTLLRDAATGELIHDFTKDGERIVVCQGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK+STN+AP A PG G+ +++ L+LKLIADIG++G PNAGKST ++ R Sbjct: 122 GGKGNVFFKTSTNRAPTKATPGKPGEIRLVELELKLIADIGLVGFPNAGKSTLFNTLART 181 Query: 183 KPKIADYPFTTLYPNLGIV-KEGY---KEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 + K+ YPFTTL+P+LG V +EG K +I+ADIPGII+ A Q G+G FL+H ER Sbjct: 182 EVKVGAYPFTTLHPSLGWVHQEGMLYQKPWIMADIPGIIEGASQNRGLGLDFLRHIERMR 241 Query: 239 VLLHI--VSALEENV-QAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 +LL + +S +E + + + ++ EL AY EL+ K ++ L++ID + D +K Sbjct: 242 LLLFVIDISGIERHSPEQDLKILMGELLAYKEELKDKDMVIALNKIDQLLPD---ERKER 298 Query: 296 LATQCGQVPFE----FSSITGHGIPQILECLHDKI 326 +A Q P + S +TG G+ + + K+ Sbjct: 299 VALLKQQFPDQEFILLSGLTGEGVDALYDLFKSKL 333 >gi|306829369|ref|ZP_07462559.1| obg family GTPase CgtA [Streptococcus mitis ATCC 6249] gi|304428455|gb|EFM31545.1| obg family GTPase CgtA [Streptococcus mitis ATCC 6249] Length = 436 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 142/329 (43%), Positives = 209/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GEKGM + G ED+ + VP GT V + + +I DL + GQ I+A GG Sbjct: 64 RHFKAESGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVITDLIEHGQEFIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HI+ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 244 HIIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLETFKKKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 304 ANYDEFEELPAIFPISGLTKQGLATLLDA 332 >gi|183221162|ref|YP_001839158.1| GTPase ObgE [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911253|ref|YP_001962808.1| GTPase ObgE [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|261266849|sp|B0S9A3|OBG_LEPBA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266850|sp|B0SRT7|OBG_LEPBP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|167775929|gb|ABZ94230.1| GTPase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779584|gb|ABZ97882.1| GTP-binding protein, Obg family [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 341 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 134/287 (46%), Positives = 184/287 (64%), Gaps = 2/287 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + IR+G GGAG + F +EKF+EFGGPDGG GG+GGDV A + TL ++ Sbjct: 4 FIDEVPIQIRAGHGGAGSVHFHKEKFVEFGGPDGGDGGKGGDVIFLAEGRMMTLENYLPD 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + AQ GE G+ +NR+G GED++L VPVGTQ+ + + LI D + +G+ +A GG Sbjct: 64 RMYAAQDGEPGLGQNRNGKNGEDLILKVPVGTQIIDSVTMELIYDFNHDGESFTIATGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK+S QAP Y+ PG G + L+LKL+ADIGI+GLPNAGKST LA +T A Sbjct: 124 GGKGNTFFKTSVQQAPRYSQPGEEGGAFSLILELKLLADIGIVGLPNAGKSTLLAKITHA 183 Query: 183 KPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 PKIA Y FTTL PNLG+V E + +ADIPGII+ A +G G+G FLKH ER + Sbjct: 184 HPKIAGYAFTTLSPNLGVVHRHEDLFRYTVADIPGIIEGASRGVGLGISFLKHIERVQGI 243 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 L + ++ + + EL YN L K ++ ++++D D+D Sbjct: 244 LFLFDGGNLQLEEELEMLRSELGNYNQTLLDKKFLLVINKMDIWDND 290 >gi|322373411|ref|ZP_08047947.1| Obg family GTPase CgtA [Streptococcus sp. C150] gi|321278453|gb|EFX55522.1| Obg family GTPase CgtA [Streptococcus sp. C150] Length = 437 Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 137/329 (41%), Positives = 207/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVKAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++GEKGM + G ED+++++P GT V + + +I DL +EGQ ++A GG Sbjct: 64 RKFKAKNGEKGMTKGMHGRGAEDLIVSIPPGTTVRDAETGKVITDLVEEGQEFVIAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERELQLELKILADVGLVGFPSVGKSTILSVVTAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGESFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIVSALEENVQAAYQCILD---ELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ + Y+ L EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 244 HVIDMSGSEGRDPYEDYLQINKELETYNLRLMERPQIIVANKMDMPEAEENLKEFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+ G+ +LE Sbjct: 304 ANYDEFEELPQIFPISSLAHQGLENLLEA 332 >gi|116492895|ref|YP_804630.1| GTPase [Pediococcus pentosaceus ATCC 25745] gi|122265641|sp|Q03F34|OBG_PEDPA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|116103045|gb|ABJ68188.1| Predicted GTPase [Pediococcus pentosaceus ATCC 25745] Length = 430 Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 141/335 (42%), Positives = 214/335 (63%), Gaps = 8/335 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G+GG G ++FRREK++ GGP GG GGRGG+V ++ L TL+DFRY+ Sbjct: 2 FVDQVKINVKAGNGGNGIVAFRREKYVPNGGPAGGDGGRGGNVVLKVDPGLRTLMDFRYR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 FKA G+ GM + +G +D+V++VP GT V + +I DL GQ +++A GG Sbjct: 62 HKFKADSGKNGMNKQMTGRSSQDLVISVPGGTIVRDLTTGRVIGDLTDNGQELVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP + G G+E + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 122 GGRGNMRFASPRNPAPEISENGEPGEEIELQLELKVLADVGLLGFPSVGKSTLLSVVTSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V+ + ++F++ADIPG+I+ A QG G+G FL+H ERT VLL Sbjct: 182 KPKIAEYHFTTLVPNLGMVQLDDGRDFVIADIPGLIEGASQGVGLGFEFLRHVERTRVLL 241 Query: 242 HIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK-KNELA 297 H+V EE+ ++ I +EL YN EL ++ +I+ +++D SD +K + ++ Sbjct: 242 HLVDMSGMTEEDPFTNFRQINEELKKYNPELLERRQIIVPTKMDLPGSDEELKKFEKQVR 301 Query: 298 TQCGQVPFE---FSSITGHGIPQILECLHDKIFSI 329 FE SSIT +G+ +++ D + I Sbjct: 302 ADERYADFEIFPISSITHNGLEKLVARTADVLEEI 336 >gi|88807282|ref|ZP_01122794.1| GTP1/Obg family GTP-binding protein [Synechococcus sp. WH 7805] gi|88788496|gb|EAR19651.1| GTP1/Obg family GTP-binding protein [Synechococcus sp. WH 7805] Length = 329 Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 134/321 (41%), Positives = 204/321 (63%), Gaps = 1/321 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ +R G GG G ++FRREK++ GGP GG GG G DV ++A +NL TL+DF+ Sbjct: 1 MQFIDQARITVRGGRGGDGIVAFRREKYVPAGGPSGGDGGHGADVVLEADANLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F A G +G +GA G+ +V+ VP GT+V L+ DL G+R+ +A G Sbjct: 61 YKRLFAAIDGRRGGPNRCTGASGQPLVIKVPCGTEVRHLKTGILLGDLTNPGERLTVAFG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S+ N+AP G G+E + L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GRGGLGNAHYLSNRNRAPEKCTEGRDGEEWPLQLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ + + ADIPG+I A QGAG+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRRPSGDGTVFADIPGLIAGAAQGAGLGHDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V ++ + + EL AY L + ++ +++++ +D L Sbjct: 241 LIHLVDGGADDPLGDLRVVEKELEAYGHGLVSRPRLLVVNKLELLDEQGRDDLLERLDAL 300 Query: 300 CGQVPFEFSSITGHGIPQILE 320 G+ P S++ G G+ +L+ Sbjct: 301 SGRRPLLISAVMGKGLDALLD 321 >gi|237737630|ref|ZP_04568111.1| SPO0B-associated GTP-binding protein [Fusobacterium mortiferum ATCC 9817] gi|229419510|gb|EEO34557.1| SPO0B-associated GTP-binding protein [Fusobacterium mortiferum ATCC 9817] Length = 428 Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 140/322 (43%), Positives = 208/322 (64%), Gaps = 6/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + +++G+GG G +FRREKF++FGGPDGG GG+GGDV A N+NTLIDF+++ Sbjct: 2 FIDEVIITVKAGNGGDGSAAFRREKFVQFGGPDGGDGGKGGDVIFVADPNINTLIDFKFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKAQ+GE G K+ G GE++++ VPVGTQV + + L+ DL+ G+ +L GG Sbjct: 62 KLFKAQNGENGQKKQMYGKTGENLIIKVPVGTQVRDVETGKLLLDLNVAGEERVLLRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSS + P A G G E + L+LKLIAD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGLGNVHFKSSIRKTPKIAGKGREGTELKVKLELKLIADVALVGYPSVGKSSFINRVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K+ Y FTTL P LG+V+ E K F++ADIPG+I+ AH+G G+GD+FL+H ER ++ Sbjct: 182 NSKVGSYHFTTLEPKLGVVRLEEGKSFVIADIPGLIEGAHEGVGLGDKFLRHIERCKMIY 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H+V E + A Y+ I EL ++ +L K +IV +++D + D + + K + Sbjct: 242 HLVDVAEIEGRDAIEDYEKINTELRKFSEKLANKKQIVLANKMDLLWDMEKYDKFKAYVE 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 Q +V + S I GI ++L Sbjct: 302 AQGNEV-YPVSVILNEGIKEVL 322 >gi|224534535|ref|ZP_03675111.1| GTP-binding protein Obg/CgtA [Borrelia spielmanii A14S] gi|224514212|gb|EEF84530.1| GTP-binding protein Obg/CgtA [Borrelia spielmanii A14S] Length = 328 Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 121/285 (42%), Positives = 181/285 (63%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + SG+GG+G +SF REKF GGPDGG+GG GG V + NL TL ++ Sbjct: 4 FKDSVSITVVSGNGGSGCVSFLREKFNAKGGPDGGNGGNGGSVIFKVRENLRTLSFYKNG 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 A++G+ GM RSGA G+D++L VP T ++ E+ + +C L+ ++ GG Sbjct: 64 HMLCAKNGKSGMGFKRSGANGKDLILFVPPNTDIYSENDETFLCRLENLNDEFVILKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FK+S +AP +A PG G + L+L L+ADIG++GLPNAGKS+ L +T A Sbjct: 124 GGLGNWNFKTSVRRAPRFAQPGESGSSLNVRLELFLVADIGLVGLPNAGKSSLLNRITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 K ++A+YPFTT P+LG+++ Y + I+ADIPGIIK A G G+G +FLKH +T +L Sbjct: 184 KSRVANYPFTTKIPHLGVLRYSYNDLIIADIPGIIKGASFGVGLGTKFLKHITKTKILAL 243 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 ++ E N +Y +L+EL +Y+ EL K +I+ +++D S+ Sbjct: 244 VIDISEANFLESYNILLNELKSYSYELFNKKKIIIANKLDLDSSE 288 >gi|311741293|ref|ZP_07715117.1| GTP-binding protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311303463|gb|EFQ79542.1| GTP-binding protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 510 Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 141/344 (40%), Positives = 205/344 (59%), Gaps = 17/344 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++++GDGG G +S REKF GGPDGG+GG GGD+ ++ + ++TL+DF Y Sbjct: 3 RFIDRVVLHLQAGDGGHGCVSVHREKFKPLGGPDGGNGGHGGDIILEVSEQIHTLMDFHY 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H KAQ G G R+G +GED++L VP GT V E G +L DL G R + A GG Sbjct: 63 RPHIKAQRGGNGAGDMRNGGRGEDLILEVPAGTVVRTEKGETL-ADLTVPGTRFVAAEGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G GQ + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 FGGLGNAALASKNRKAPGFALQGEPGQAHDLILELKSMADVGLVGFPSAGKSSLISVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKI DYPFTTL PNLG+V G F +AD+PG+I A G G+G FL+H ERT VL Sbjct: 182 AKPKIGDYPFTTLQPNLGVVDMGDSSFTIADVPGLIPGAADGKGLGLDFLRHIERTAVLA 241 Query: 242 HI------------VSALE--ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 H+ VS +E EN A YQ L E + +LR++ ++ L++ D +++ Sbjct: 242 HVVDTATIEPGRDPVSDIEAMENELAKYQEALQEDTGLG-DLRERPRVIILNKADVPEAE 300 Query: 288 TLAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 LA K++L + G F S++ G+ + L D + R Sbjct: 301 ELAEFVKDDLEEKFGWPVFIISAVARKGLDPLKFRLMDMVTEHR 344 >gi|319937625|ref|ZP_08012029.1| GTP-binding protein [Coprobacillus sp. 29_1] gi|319807267|gb|EFW03879.1| GTP-binding protein [Coprobacillus sp. 29_1] Length = 428 Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 127/289 (43%), Positives = 193/289 (66%), Gaps = 6/289 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D+ K+Y+ +G GG G ++FRRE + GGP GG GG+GG + +AT++L+TL+DFR Sbjct: 1 MKFIDKVKIYVEAGKGGDGVVAFRREAHVPKGGPSGGDGGKGGSIIFEATTSLSTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +KA++G GM + GA D++L VPVGT +++ED ++ DL ++ QR ++A G Sbjct: 61 YHREYKARNGGNGMAKKMHGADASDMILKVPVGTVIYDEDTGKILADLTEDKQRAVIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F +S N AP G G + + +LKL+AD+G++G P+ GKSTFL+ VT Sbjct: 121 GRGGRGNTRFATSRNPAPTICERGEPGIKYNLTCELKLLADVGLVGFPSVGKSTFLSVVT 180 Query: 181 RAKPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 RAKP+IADY FTT+ PNLG+V K+G + F++AD+PG+I+ A QG G+G +FL+H ER Sbjct: 181 RAKPEIADYHFTTIVPNLGVVQAKDG-RSFVMADLPGLIEGASQGKGLGHQFLRHIERCR 239 Query: 239 VLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 V++HI+ + Y I EL Y L ++ +++ +++D V Sbjct: 240 VIVHIIDMGGTEGRDPYEDYLAINKELGDYKYRLLERPQVIIANKMDEV 288 >gi|116512396|ref|YP_809612.1| GTPase ObgE [Lactococcus lactis subsp. cremoris SK11] gi|123125468|sp|Q02XY2|OBG_LACLS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|116108050|gb|ABJ73190.1| Predicted GTPase [Lactococcus lactis subsp. cremoris SK11] Length = 437 Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 135/327 (41%), Positives = 213/327 (65%), Gaps = 10/327 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD A++ +++G GG G ++FRREK++ GGP GG GG+GG V + ++TL+DFRY Sbjct: 4 FLDTARIEVKAGKGGDGAVAFRREKYVPDGGPAGGDGGKGGSVIFKVDEGMSTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F+ + GEKGM + G ED+++ VP GT V + + ++ DL ++ Q ++A GG Sbjct: 64 RIFRGKPGEKGMNKGMHGRGAEDLIVHVPQGTTVKDNETGDVLVDLIEKDQEFVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G++KI+ L+L+++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEVAENGEPGEDKILLLELRVLADVGLVGFPSVGKSTLLSVVSNA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTT+ PN+G+V+ GY + F++AD+PG+I+ AH GAG+G +FL+H ERT VLL Sbjct: 184 RPKIGAYHFTTITPNIGMVQVGYGDSFVMADMPGLIEGAHSGAGLGIQFLRHIERTRVLL 243 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 HI +S LE + Y+ I DEL +YN L ++ +++ +++D + ++ LA K +LA Sbjct: 244 HILDMSELEGRDPYEDYKTINDELESYNLRLMERPQLIVANKMDMPEAAERLAEFKEKLA 303 Query: 298 TQC---GQVP--FEFSSITGHGIPQIL 319 ++P FE S + G+ +L Sbjct: 304 ADLEADQEMPEIFEVSGLIKTGLQGLL 330 >gi|160915304|ref|ZP_02077517.1| hypothetical protein EUBDOL_01313 [Eubacterium dolichum DSM 3991] gi|158433103|gb|EDP11392.1| hypothetical protein EUBDOL_01313 [Eubacterium dolichum DSM 3991] Length = 429 Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 127/321 (39%), Positives = 202/321 (62%), Gaps = 6/321 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+++++G GG G ++FRREK++ +GGP GG GG GG+V TL+D RYQ Sbjct: 2 FVDRVKLHVKAGKGGDGIVAFRREKYVAYGGPSGGDGGNGGNVVFMVDEGRTTLLDLRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + A++G G + GA G D+++ VP GT V + +I DL + GQ+ I+A GG Sbjct: 62 KKVLAENGGNGKTKKMHGASGNDMIVKVPQGTIVKDAKTGRMIADLTRHGQKEIIARGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSS N AP Y+ G G+E I ++LK++AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNFHFKSSKNTAPQYSELGAPGEEFDIQVELKVLADVGLVGFPSVGKSTLLSVVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IA+Y FTT+ PNLG+V+ + F++AD+PG+I+ A QG G+G +FL+H ER V+L Sbjct: 182 RPEIAEYHFTTIAPNLGMVQVPDGRSFVMADLPGLIEGASQGKGLGHQFLRHIERCRVIL 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V + + Y+ I +EL+ Y L ++ +IV +++D ++ ++ E+ Sbjct: 242 HVVDMGANDGRDPLEDYRIINEELANYEYRLMERPQIVLANKMDLEHAEENLKRFKEVYP 301 Query: 299 QCGQVPFEFSSITGHGIPQIL 319 FE ++I G+ +L Sbjct: 302 DVEV--FETTTIIAEGLEPVL 320 >gi|297562315|ref|YP_003681289.1| GTP-binding protein Obg/CgtA [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846763|gb|ADH68783.1| GTP-binding protein Obg/CgtA [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 454 Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 131/332 (39%), Positives = 205/332 (61%), Gaps = 9/332 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DEA +++++G+GG G S REKF GGPDGG+GG GGDV ++ + TL+D++ + Sbjct: 4 FVDEAVLHVKAGNGGHGCASVHREKFKPLGGPDGGNGGHGGDVVLEVDTQTATLLDYQRR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H A +G G +R+GAKGED+VL VP GT V DG ++ DL G R++LA GG+ Sbjct: 64 PHRTAGNGTPGQGGHRAGAKGEDLVLKVPDGTVVSRMDG-EVVADLVGHGTRLVLAEGGH 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA + +AP +A G GQ + L++K IAD+G++G P+AGKS+ +A+++ A Sbjct: 123 GGLGNAALATKRRKAPGFALKGEEGQGFDVRLEMKTIADVGLVGFPSAGKSSLIAAMSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G ++++AD+PG+I A G G+G FL+H ER LLH Sbjct: 183 RPKIADYPFTTLVPNLGVVEAGNVQYVIADVPGLIPGASDGKGLGLEFLRHIERCSTLLH 242 Query: 243 IVSALE----ENVQAAYQCILDELSAYNS----ELRKKIEIVGLSQIDTVDSDTLARKKN 294 ++ + + + + ELSAY +L + +V L+++D ++ LA Sbjct: 243 VLDCATYEQGRDPVSDLEALEAELSAYGRSTGVDLSDRPRLVALNKVDVPEARELAELVT 302 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + + G E S+ + G+ ++ L +++ Sbjct: 303 PMLVERGYRVLEVSAASREGLRELSFALGEQV 334 >gi|182419818|ref|ZP_02951058.1| Spo0B-associated GTP-binding protein [Clostridium butyricum 5521] gi|237666821|ref|ZP_04526806.1| Obg family GTPase CgtA [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376366|gb|EDT73948.1| Spo0B-associated GTP-binding protein [Clostridium butyricum 5521] gi|237658020|gb|EEP55575.1| GTPase, Obg family [Clostridium butyricum E4 str. BoNT E BL5262] Length = 429 Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 132/323 (40%), Positives = 210/323 (65%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AKV+I+SG+GG G I+FRREK++ GGPDGG GG+GG + + + + TL+DF+Y+ Sbjct: 2 FIDKAKVFIKSGNGGDGAITFRREKYVPLGGPDGGDGGKGGSIIFKVDTGITTLLDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A+ G G G G D+++ VP+GT + E + +I D+ + + +++ GG Sbjct: 62 KKFIAECGGNGSGSKCYGKDGADLIINVPMGTIIREAESNKIIADMSHKDEELVVLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++T QAP+YA PG+ G E I L+LKL+AD+G++G PN GKST L+ T+A Sbjct: 122 GGKGNTKFATATKQAPHYAEPGMPGAELNITLELKLLADVGLLGFPNVGKSTLLSMTTKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTT+ PNLG+V +G + F++ADIPGII+ A +G G+G +FL+H ERT +L+ Sbjct: 182 KPKIANYHFTTIKPNLGVVAVDGIEPFVMADIPGIIEGAAEGVGLGIQFLRHIERTRLLI 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V S +E + I +EL Y+ +L + +IV ++ D + +++ + Sbjct: 242 HVVDISGVEGREPFEDFVKINEELKKYSVKLWDRPQIVVANKSDMLYDESIYEDFKKKVE 301 Query: 299 QCGQVP-FEFSSITGHGIPQILE 320 + G F+ S+ T G+ +++ Sbjct: 302 ELGYTKVFKMSAATNDGVDAVMK 324 >gi|251782721|ref|YP_002997024.1| GTPase ObgE [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391351|dbj|BAH81810.1| GTP-binding protein OBG family [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 437 Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 64 RKFKAKSGEKGMTKGMHGRGSEDLIIAVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQENLKAFKEKLA 303 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILEC 321 Q + +P F SS+ G+ +LE Sbjct: 304 AQYDEFDDLPMIFPISSLAHQGLDNLLEA 332 >gi|149194857|ref|ZP_01871951.1| GTPase ObgE [Caminibacter mediatlanticus TB-2] gi|149135016|gb|EDM23498.1| GTPase ObgE [Caminibacter mediatlanticus TB-2] Length = 354 Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 131/289 (45%), Positives = 194/289 (67%), Gaps = 2/289 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ ++SG GGAG +SFRREKF+ GGPDGG GG+GGDV ++ +N +TL F+ + Sbjct: 2 FVDNIKLTVKSGKGGAGCVSFRREKFVAKGGPDGGDGGKGGDVIVECDNNTHTLSHFKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KA +G G R + GA GED++L VP GT + + ++ D+ GQ+ +L GG Sbjct: 62 RLLKASNGRPGEGRKKHGADGEDLILKVPPGTIIKDAKTGEILLDMKYHGQKEVLLEGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+ Q P YA PG G+E I ++LKLIAD+G++G PNAGKST +++++ A Sbjct: 122 GGLGNWHFRGPRRQVPRYAQPGEEGKELEIIMELKLIADVGLVGFPNAGKSTLISALSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+VK + Y+ F++ADIPGII+ AH+G G+G FLKH ERT ++L Sbjct: 182 KPEIANYEFTTLTPKLGVVKVDEYRSFVMADIPGIIEGAHEGKGLGLEFLKHIERTKIIL 241 Query: 242 HIVS-ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 +++ A + ++ + EL Y+ L K+ + L+++D VDS + Sbjct: 242 YVIDLASFRDPVYQFKTLQKELKNYSETLAKRDYAIALNKVDAVDSSKV 290 >gi|331266522|ref|YP_004326152.1| GTP1/Obg family GTP-binding protein [Streptococcus oralis Uo5] gi|326683194|emb|CBZ00812.1| GTP1/Obg family GTP-binding protein [Streptococcus oralis Uo5] Length = 436 Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 142/329 (43%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + +I DL + GQ I+A GG Sbjct: 64 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVITDLIEHGQEFIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HI+ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 244 HIIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLKTFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 304 ANYDEFEELPAIFPISGLTKQGLATLLDA 332 >gi|312863431|ref|ZP_07723669.1| Obg family GTPase CgtA [Streptococcus vestibularis F0396] gi|311100967|gb|EFQ59172.1| Obg family GTPase CgtA [Streptococcus vestibularis F0396] Length = 437 Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 136/329 (41%), Positives = 207/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVKAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++GEKGM + G ED+++++P GT V + + +I D+ ++GQ I+A GG Sbjct: 64 RKFKAKNGEKGMTKGMHGRGAEDLIVSIPPGTTVRDAETGKVITDMVEDGQEFIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERELQLELKILADVGLVGFPSVGKSTILSVVTAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGESFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIVSALEENVQAAYQCILD---ELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ + Y+ L EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLQINKELETYNLRLMERPQIIVANKMDMPEAEENLKEFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+ G+ +LE Sbjct: 304 ANYDEFDELPQIFPISSLAHQGLENLLEA 332 >gi|162139399|ref|YP_280537.2| GTPase ObgE [Streptococcus pyogenes MGAS6180] Length = 435 Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 2 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVNEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 62 RKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 242 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQENLKAFKKKLA 301 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILEC 321 Q + +P F SS+ G+ +LE Sbjct: 302 AQYDEFDDLPMIFPISSLAHQGLENLLEA 330 >gi|257869432|ref|ZP_05649085.1| GTP-binding protein [Enterococcus gallinarum EG2] gi|257803596|gb|EEV32418.1| GTP-binding protein [Enterococcus gallinarum EG2] Length = 437 Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 142/333 (42%), Positives = 207/333 (62%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 4 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVILVVDEGLRTLMDFRFN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GE GM + G ED + VP GT V + D +L+ DL ++GQ + +A GG Sbjct: 64 RHFKAQPGENGMSKGMHGRGAEDTYIKVPQGTTVRDADTGALLGDLLEQGQTLTIAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 124 GGRGNIRFASPKNPAPELAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 RPKIGAYHFTTLVPNLGMVTTSDGRSFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + YQ I EL+ +N L ++ +I+ +++D +S + L + K +LA Sbjct: 244 HVIDMSGMEGRDPYEDYQAINQELATHNLRLLERPQIIVANKMDMPESEENLVKFKEQLA 303 Query: 298 TQ-----CGQVP-FEFSSITGHGIPQILECLHD 324 + +P F S +T GI +L D Sbjct: 304 KEQTDEFADPLPIFPISGVTRKGIDALLSATAD 336 >gi|123639685|sp|Q48SX8|OBG_STRPM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|71802829|gb|AAX72182.1| GTP-binding protein OBG family [Streptococcus pyogenes MGAS6180] Length = 437 Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVNEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 64 RKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQENLKAFKKKLA 303 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILEC 321 Q + +P F SS+ G+ +LE Sbjct: 304 AQYDEFDDLPMIFPISSLAHQGLENLLEA 332 >gi|323127547|gb|ADX24844.1| GTPase ObgE [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 439 Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 207/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 64 RKFKAKSGEKGMTKGMHGRGSEDLIIAVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQENLKAFKEKLA 303 Query: 298 TQCGQ-----VPFEFSSITGHGIPQILEC 321 Q + + F SS+ G+ +LE Sbjct: 304 AQYDEFDDLPMIFPISSLAHQGLDNLLEA 332 >gi|319948143|ref|ZP_08022306.1| GTPase CgtA [Dietzia cinnamea P4] gi|319438211|gb|EFV93168.1| GTPase CgtA [Dietzia cinnamea P4] Length = 486 Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 138/346 (39%), Positives = 207/346 (59%), Gaps = 17/346 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++ +GDGG G S REKF GGPDGG+GG GGDV + ++TL+DF + Sbjct: 3 RFVDRVVLHLAAGDGGRGCTSVHREKFKPLGGPDGGNGGDGGDVVLVVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H +A G+ GM +R+GA+G D+VL VP GT V +E+G ++ DL G R + A GG Sbjct: 63 RPHARAGKGQPGMGSHRNGAQGADLVLPVPPGTVVLDENG-EVLADLVGAGTRFVAAEGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+ + + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 KGGLGNAALASRARKAPGFALLGEPGEVRDVTLELKSMADVGLVGFPSAGKSSLVSVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A +G G+G FL+H ERT VL Sbjct: 182 AKPKIADYPFTTLVPNLGVVSVGDDTFTIADVPGLIPGASEGRGLGLDFLRHIERTAVLA 241 Query: 242 HIVSALEENVQAAYQCILD------ELSAYNSE--------LRKKIEIVGLSQIDTVDSD 287 H+V N+++ + D EL+AY SE L + +V L++ID D+ Sbjct: 242 HVVDC--ANLESDRDPVSDVDALEAELAAYRSELSDAGIGDLSDRPRVVVLNKIDVPDAA 299 Query: 288 TLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 +A E G + S++ G+ ++ L++ + + R N Sbjct: 300 DMAEMVREQFEARGWPVYAISAVAHKGLDELRFGLYELVKAHRKAN 345 >gi|38234350|ref|NP_940117.1| GTPase ObgE [Corynebacterium diphtheriae NCTC 13129] gi|81401324|sp|Q6NFV7|OBG_CORDI RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|38200613|emb|CAE50309.1| GTP1/OBG-family GTP-binding protein [Corynebacterium diphtheriae] Length = 508 Score = 218 bits (556), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 145/345 (42%), Positives = 205/345 (59%), Gaps = 19/345 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++ +GDGG G S REKF GGPDGG+GG GGD+ + + +TL+D Y Sbjct: 3 RFVDRVVLHLEAGDGGNGCASVHREKFKPLGGPDGGNGGHGGDIILTVSPQAHTLLDLHY 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H KAQ G G +R+GA+G+D+VL VP GT V E G +L DL G I A GG Sbjct: 63 RPHLKAQRGANGAGDHRNGARGQDLVLEVPAGTVVMSESGETL-ADLTSPGMTFIAAKGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S+ +AP +A G G++ + L+LK +ADIG++G P+AGKS+ ++ ++ Sbjct: 122 FGGLGNAALASAARKAPGFALKGEPGEQHDVILELKSMADIGLVGFPSAGKSSLISVMSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKI DYPFTTL PNLG+V G F +AD+PG+I A QG G+G FL+H ERT VL Sbjct: 182 AKPKIGDYPFTTLQPNLGVVDMGNDAFTIADVPGLIPGASQGKGLGLDFLRHIERTAVLA 241 Query: 242 HIVS---------------ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 H+V ALEE + AAYQ LDE ++ +LR++ IV L++ D D+ Sbjct: 242 HVVDAATLEPGRDPISDIEALEEEL-AAYQSALDEDTSLG-DLRERARIVILNKADIPDA 299 Query: 287 DTLAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 LA K ++ + G F S++ G+ + + D + R Sbjct: 300 LELAEFLKEDIEEKFGWPVFIISAVARKGLDPLKYAMLDLVQQSR 344 >gi|13358024|ref|NP_078298.1| GTPase ObgE [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170761902|ref|YP_001752546.1| GTPase ObgE [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920443|ref|ZP_02931753.1| GTP-binding protein [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|186701718|ref|ZP_02971410.1| GTP-binding protein Obg/CgtA family protein [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|81858602|sp|Q9PQ29|OBG_UREPA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277731|sp|B1AJA2|OBG_UREP2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|11356857|pir||F82888 GTP-binding protein UU461 [imported] - Ureaplasma urealyticum gi|6899454|gb|AAF30873.1|AE002142_7 GTP-binding protein [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827479|gb|ACA32741.1| GTP-binding protein [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902896|gb|EDT49185.1| GTP-binding protein [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|186700985|gb|EDU19267.1| GTP-binding protein Obg/CgtA family protein [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 435 Score = 218 bits (556), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 127/288 (44%), Positives = 183/288 (63%), Gaps = 5/288 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D+ K+ + +G+GG G +S+RRE + GGP GG+GG GG +W N +L + Sbjct: 1 MAFIDKCKIVLIAGNGGDGIVSWRRETHVPEGGPAGGNGGNGGSIWFVGNHNETSLEFLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ +A+HGEKG +N+ GA EDV + VP+GT V+ ++ D++ + Q+ ++A G Sbjct: 61 YKKIIRAKHGEKGDIKNQHGANAEDVFINVPLGTVVYNPITNEILADINIDQQKYLVAQG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKS N+AP G LG+ + L+LK IADIGIIGLPNAGKST +++ T Sbjct: 121 GLGGHGNTHFKSPFNKAPNLYELGELGENVEVLLELKTIADIGIIGLPNAGKSTLISTFT 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPK A+Y FTTL P LG + I ADIPG+I+ AH G G+G FLKH ER +L Sbjct: 181 NAKPKTANYMFTTLNPVLGTIYRDQNRIIFADIPGLIEGAHTGVGLGHDFLKHIERCFLL 240 Query: 241 LHIVSALEEN----VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 +H++S L+ N + AY+ I++EL Y L K ++ ++ID + Sbjct: 241 IHLIS-LDPNDNPDIINAYETIVNELKQYKQNLVNKPIVLVANKIDQI 287 >gi|162139080|ref|YP_596862.2| GTPase ObgE [Streptococcus pyogenes MGAS9429] gi|162139129|ref|YP_600685.2| GTPase ObgE [Streptococcus pyogenes MGAS2096] Length = 435 Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 2 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 62 RKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 242 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQENLKAFKKKLA 301 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILEC 321 Q + +P F SS+ G+ +LE Sbjct: 302 AQYDEFDDLPMIFPISSLAHQGLENLLEA 330 >gi|306827149|ref|ZP_07460439.1| obg family GTPase CgtA [Streptococcus pyogenes ATCC 10782] gi|304430605|gb|EFM33624.1| obg family GTPase CgtA [Streptococcus pyogenes ATCC 10782] Length = 437 Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 64 RKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQENLKAFKKKLA 303 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILEC 321 Q + +P F SS+ G+ +LE Sbjct: 304 AQYDEFDDLPMIFPISSLAHQGLENLLEA 332 >gi|315613023|ref|ZP_07887934.1| obg family GTPase CgtA [Streptococcus sanguinis ATCC 49296] gi|315315133|gb|EFU63174.1| obg family GTPase CgtA [Streptococcus sanguinis ATCC 49296] Length = 436 Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 141/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + +I DL + GQ I+A GG Sbjct: 64 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVITDLIEHGQEFIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLKTFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 304 ANYDEFEELPAIFPISGLTKQGLATLLDA 332 >gi|307703802|ref|ZP_07640743.1| GTP-binding protein Obg/CgtA [Streptococcus oralis ATCC 35037] gi|307622637|gb|EFO01633.1| GTP-binding protein Obg/CgtA [Streptococcus oralis ATCC 35037] Length = 434 Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 141/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 2 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + +I DL + GQ I+A GG Sbjct: 62 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVITDLIEHGQEFIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 122 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 242 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLKTFKEKLA 301 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 302 ANYDEFEELPAIFPISGLTKQGLATLLDA 330 >gi|261263108|sp|Q1JBB7|OBG_STRPB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263109|sp|Q1JLA1|OBG_STRPC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|94542269|gb|ABF32318.1| GTP-binding protein CgtA [Streptococcus pyogenes MGAS9429] gi|94546094|gb|ABF36141.1| GTP-binding protein CgtA [Streptococcus pyogenes MGAS2096] Length = 437 Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 64 RKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQENLKAFKKKLA 303 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILEC 321 Q + +P F SS+ G+ +LE Sbjct: 304 AQYDEFDDLPMIFPISSLAHQGLENLLEA 332 >gi|183603403|ref|ZP_02712185.2| Spo0B-associated GTP-binding protein [Streptococcus pneumoniae CDC1087-00] gi|225854575|ref|YP_002736087.1| GTPase ObgE [Streptococcus pneumoniae JJA] gi|298502909|ref|YP_003724849.1| GTP-binding protein [Streptococcus pneumoniae TCH8431/19A] gi|183569556|gb|EDT90084.1| Spo0B-associated GTP-binding protein [Streptococcus pneumoniae CDC1087-00] gi|225722417|gb|ACO18270.1| Spo0B-associated GTP-binding protein [Streptococcus pneumoniae JJA] gi|298238504|gb|ADI69635.1| GTP-binding protein [Streptococcus pneumoniae TCH8431/19A] Length = 436 Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 140/329 (42%), Positives = 206/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVLTDLIEHGQEFIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS----DTLARKKN 294 HI+ SA E + Y I EL +YN L ++ +I+ +++D +S + +K + Sbjct: 244 HIIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLEEFKKKLS 303 Query: 295 ELATQCGQVP--FEFSSITGHGIPQILEC 321 E + ++P F S +T G+ +L+ Sbjct: 304 ENYDEFEELPAIFPISGLTKQGLATLLDA 332 >gi|161484700|ref|NP_607444.2| GTPase ObgE [Streptococcus pyogenes MGAS8232] Length = 435 Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 2 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 62 RKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 242 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQENLKAFKKKLA 301 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILEC 321 Q + +P F SS+ G+ +LE Sbjct: 302 AQYDEFDDLPMIFPISSLAHQGLENLLEA 330 >gi|160938941|ref|ZP_02086292.1| hypothetical protein CLOBOL_03835 [Clostridium bolteae ATCC BAA-613] gi|158437904|gb|EDP15664.1| hypothetical protein CLOBOL_03835 [Clostridium bolteae ATCC BAA-613] Length = 441 Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 144/336 (42%), Positives = 215/336 (63%), Gaps = 10/336 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK++I+SG GG G +SFRRE ++ GGPDGG GGRGGDV Q NTL+DFR+ Sbjct: 14 FADSAKIFIKSGKGGDGHVSFRRELYVPNGGPDGGDGGRGGDVIFQVDKGKNTLVDFRHV 73 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ G++G K+ GA +D+++ VP GT + + + +I D+ + QR ++ GG Sbjct: 74 RKYIAKDGQEGGKKRCHGADADDLIVKVPEGTVLKDFETGKVIADMSGDNQREVILRGGR 133 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST Q P YA PG G E + L+LK+IAD+G++G PN GKST L+ V+ A Sbjct: 134 GGLGNMHFATSTMQVPKYAQPGQPGAELWVQLELKVIADVGLVGFPNVGKSTLLSVVSNA 193 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P+LG+V G F++ADIPG+I+ A +G G+G FLKH ERT VL+ Sbjct: 194 KPEIANYHFTTLNPHLGVVDLGDGAGFVMADIPGLIEGASEGIGLGHAFLKHIERTKVLV 253 Query: 242 HIV---SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV--DSDT---LARKK 293 H+V S + + I EL AYN EL K+ +++ +++D V + DT L + Sbjct: 254 HVVDGASVEGRDPLEDIRTINRELEAYNPELLKRPQVIAANKMDAVYAEEDTEIILDELR 313 Query: 294 NELATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 NE + +V F S+++ G+ ++L ++D + ++ Sbjct: 314 NEFEPKGIRV-FPISAVSRQGVKELLYHINDLLKTV 348 >gi|293365261|ref|ZP_06611978.1| Spo0B-associated GTP-binding protein [Streptococcus oralis ATCC 35037] gi|291316711|gb|EFE57147.1| Spo0B-associated GTP-binding protein [Streptococcus oralis ATCC 35037] Length = 436 Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 141/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + +I DL + GQ I+A GG Sbjct: 64 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVITDLIEHGQEFIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLKTFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 304 ANYDEFEELPAIFPISGLTKQGLATLLDA 332 >gi|322374444|ref|ZP_08048958.1| Obg family GTPase CgtA [Streptococcus sp. C300] gi|321279944|gb|EFX56983.1| Obg family GTPase CgtA [Streptococcus sp. C300] Length = 436 Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 141/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + +I DL + GQ I+A GG Sbjct: 64 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVITDLIEHGQEFIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLKTFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 304 ANYDEFEELPAIFPISGLTKQGLATLLDA 332 >gi|168494512|ref|ZP_02718655.1| Spo0B-associated GTP-binding protein [Streptococcus pneumoniae CDC3059-06] gi|183575546|gb|EDT96074.1| Spo0B-associated GTP-binding protein [Streptococcus pneumoniae CDC3059-06] Length = 434 Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 207/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 2 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + ++ DL + GQ I+A GG Sbjct: 62 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVLTDLIEHGQEFIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 122 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS----DTLARKKN 294 HI+ SA E + Y I EL +YN L ++ +I+ +++D +S + +K + Sbjct: 242 HIIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLEEFKKKLS 301 Query: 295 ELATQCGQVP--FEFSSITGHGIPQILEC 321 E + ++P F S +T G+ +L+ Sbjct: 302 ENYDEFEELPAIFPISGLTKQGLATLLDA 330 >gi|288800711|ref|ZP_06406168.1| Obg family GTPase CgtA [Prevotella sp. oral taxon 299 str. F0039] gi|288332172|gb|EFC70653.1| Obg family GTPase CgtA [Prevotella sp. oral taxon 299 str. F0039] Length = 389 Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 138/330 (41%), Positives = 212/330 (64%), Gaps = 9/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + R K+ GGPDGG GG GG V+++ N TL+ ++Q Sbjct: 6 FVDYVKIYCRSGKGGRGSMHLRHVKYNPNGGPDGGDGGDGGSVYLRGNHNYWTLLHLKFQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G + G G+ + VP GT V++ + +CD+ +GQ ++L GG Sbjct: 66 RHVYAEHGGNGGRDKCHGTNGKHQYIDVPCGTVVYDAETGKYVCDVKYDGQEVLLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F+++TNQAP YA PG QE+ I L+LKL+AD+G++G PNAGKST L+S++ A Sbjct: 126 GGLGNFQFRTATNQAPRYAQPGEPMQEQTIILELKLLADVGLVGFPNAGKSTLLSSLSSA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGY---KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +PKIA+YPFTTL P+LGIV GY K F++ADIPGII+ A +G G+G RFL+H ER + Sbjct: 186 RPKIANYPFTTLEPSLGIV--GYHDNKSFVMADIPGIIEGASEGKGLGLRFLRHIERNSL 243 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LL +V ++++ Y+ +L+EL +N ++ K ++ +++ D +D + ++ K L Sbjct: 244 LLFMVPGDTDDIKKEYEILLNELRNFNPDMLDKHRVLAVTKSDLLDEELISMLKETLPE- 302 Query: 300 CGQVPFEF-SSITGHGIPQILECLHDKIFS 328 +P F S++TG G+ ++ + L ++ S Sbjct: 303 --DLPCVFISAVTGQGLNELKDILWKELNS 330 >gi|209559575|ref|YP_002286047.1| GTPase ObgE [Streptococcus pyogenes NZ131] gi|261277709|sp|B5XLZ0|OBG_STRPZ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|209540776|gb|ACI61352.1| GTP-binding protein Obg [Streptococcus pyogenes NZ131] Length = 437 Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 207/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 64 RKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQENLKAFKKKLA 303 Query: 298 TQCGQ-----VPFEFSSITGHGIPQILEC 321 Q + + F SS+ G+ +LE Sbjct: 304 AQYDEFDDLPMIFPISSLAHQGLDNLLEA 332 >gi|161761309|ref|YP_060375.2| GTPase ObgE [Streptococcus pyogenes MGAS10394] Length = 435 Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 207/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 2 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 62 RKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 242 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQENLKAFKKKLA 301 Query: 298 TQCGQ-----VPFEFSSITGHGIPQILEC 321 Q + + F SS+ G+ +LE Sbjct: 302 AQYDEFDDLPMIFPISSLAHQGLENLLEA 330 >gi|161378150|ref|NP_269447.2| GTPase ObgE [Streptococcus pyogenes M1 GAS] gi|161936123|ref|YP_282451.2| GTPase ObgE [Streptococcus pyogenes MGAS5005] Length = 435 Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 2 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 62 RKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 242 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDIPEAQENLKAFKKKLA 301 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILEC 321 Q + +P F SS+ G+ +LE Sbjct: 302 AQYDEFDDLPMIFPISSLAHQGLENLLEA 330 >gi|81847934|sp|Q8P0I6|OBG_STRP8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|19748499|gb|AAL97943.1| putative GTP-binding protein [Streptococcus pyogenes MGAS8232] Length = 437 Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 64 RKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQENLKAFKKKLA 303 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILEC 321 Q + +P F SS+ G+ +LE Sbjct: 304 AQYDEFDDLPMIFPISSLAHQGLENLLEA 332 >gi|81822737|sp|Q5XBM1|OBG_STRP6 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|50903477|gb|AAT87192.1| CgtA [Streptococcus pyogenes MGAS10394] Length = 437 Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 207/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 64 RKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQENLKAFKKKLA 303 Query: 298 TQCGQ-----VPFEFSSITGHGIPQILEC 321 Q + + F SS+ G+ +LE Sbjct: 304 AQYDEFDDLPMIFPISSLAHQGLENLLEA 332 >gi|149003990|ref|ZP_01828798.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae SP14-BS69] gi|149013178|ref|ZP_01833995.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae SP19-BS75] gi|221231823|ref|YP_002510975.1| GTP-binding protein [Streptococcus pneumoniae ATCC 700669] gi|225861045|ref|YP_002742554.1| GTPase ObgE [Streptococcus pneumoniae Taiwan19F-14] gi|237650022|ref|ZP_04524274.1| GTPase ObgE [Streptococcus pneumoniae CCRI 1974] gi|237821742|ref|ZP_04597587.1| GTPase ObgE [Streptococcus pneumoniae CCRI 1974M2] gi|298230098|ref|ZP_06963779.1| GTPase ObgE [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255536|ref|ZP_06979122.1| GTPase ObgE [Streptococcus pneumoniae str. Canada MDR_19A] gi|261263114|sp|B8ZPS8|OBG_STRPJ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|147758049|gb|EDK65055.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae SP14-BS69] gi|147763029|gb|EDK69973.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae SP19-BS75] gi|220674283|emb|CAR68824.1| putative GTP-binding protein [Streptococcus pneumoniae ATCC 700669] gi|225728204|gb|ACO24055.1| Spo0B-associated GTP-binding protein [Streptococcus pneumoniae Taiwan19F-14] gi|301794198|emb|CBW36616.1| putative GTP-binding protein [Streptococcus pneumoniae INV104] gi|327389366|gb|EGE87711.1| GTP-binding protein Obg/CgtA [Streptococcus pneumoniae GA04375] gi|332075410|gb|EGI85879.1| GTP-binding protein Obg/CgtA [Streptococcus pneumoniae GA41301] gi|332201561|gb|EGJ15631.1| GTP-binding protein Obg/CgtA [Streptococcus pneumoniae GA47368] gi|332202936|gb|EGJ17004.1| GTP-binding protein Obg/CgtA [Streptococcus pneumoniae GA47901] Length = 434 Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 207/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 2 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + ++ DL + GQ I+A GG Sbjct: 62 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVLTDLIEHGQEFIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 122 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS----DTLARKKN 294 HI+ SA E + Y I EL +YN L ++ +I+ +++D +S + +K + Sbjct: 242 HIIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLEEFKKKLS 301 Query: 295 ELATQCGQVP--FEFSSITGHGIPQILEC 321 E + ++P F S +T G+ +L+ Sbjct: 302 ENYDEFEELPAIFPISGLTKQGLATLLDA 330 >gi|161410747|ref|NP_358578.2| GTPase ObgE [Streptococcus pneumoniae R6] Length = 434 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 141/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 2 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + ++ DL + GQ I+A GG Sbjct: 62 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVLTDLIEHGQEFIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 122 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HI+ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 242 HIIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVTNKMDMPESQENLEEFKKKLA 301 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 302 ENYDEFEELPAIFPISGLTKQGLATLLDA 330 >gi|162139103|ref|YP_598753.2| GTPase ObgE [Streptococcus pyogenes MGAS10270] Length = 435 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 2 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 62 RKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVIIDLVEHGQEVVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 242 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQENLKAFKKKLA 301 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILEC 321 Q + +P F SS+ G+ +LE Sbjct: 302 AQYDEFDDLPMIFPISSLAHQGLENLLEA 330 >gi|261263110|sp|Q1JGD5|OBG_STRPD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|94544161|gb|ABF34209.1| GTP-binding protein CgtA [Streptococcus pyogenes MGAS10270] Length = 437 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 64 RKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVIIDLVEHGQEVVIAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQENLKAFKKKLA 303 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILEC 321 Q + +P F SS+ G+ +LE Sbjct: 304 AQYDEFDDLPMIFPISSLAHQGLENLLEA 332 >gi|81856077|sp|Q99Z94|OBG_STRP1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|13622447|gb|AAK34168.1| putative GTP-binding protein [Streptococcus pyogenes M1 GAS] gi|71853683|gb|AAZ51706.1| GTP-binding protein OBG family [Streptococcus pyogenes MGAS5005] Length = 437 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 64 RKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDIPEAQENLKAFKKKLA 303 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILEC 321 Q + +P F SS+ G+ +LE Sbjct: 304 AQYDEFDDLPMIFPISSLAHQGLENLLEA 332 >gi|116515321|ref|YP_816441.1| GTPase ObgE [Streptococcus pneumoniae D39] gi|183603618|ref|ZP_02716115.2| Spo0B-associated GTP-binding protein [Streptococcus pneumoniae CDC0288-04] gi|81845105|sp|Q8DPV8|OBG_STRR6 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|122278673|sp|Q04KK7|OBG_STRP2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|15458598|gb|AAK99788.1| GTP-binding protein [Streptococcus pneumoniae R6] gi|116075897|gb|ABJ53617.1| GTP1/Obg family GTP-binding protein [Streptococcus pneumoniae D39] gi|183573748|gb|EDT94276.1| Spo0B-associated GTP-binding protein [Streptococcus pneumoniae CDC0288-04] Length = 436 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 141/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVLTDLIEHGQEFIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HI+ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 244 HIIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVTNKMDMPESQENLEEFKKKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 304 ENYDEFEELPAIFPISGLTKQGLATLLDA 332 >gi|307706491|ref|ZP_07643299.1| GTP-binding protein Obg/CgtA [Streptococcus mitis SK321] gi|307618131|gb|EFN97290.1| GTP-binding protein Obg/CgtA [Streptococcus mitis SK321] Length = 434 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 142/329 (43%), Positives = 207/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 2 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + ++ DL + GQ I+A GG Sbjct: 62 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVLTDLIEHGQEFIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 122 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HI+ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 242 HIIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLEEFKKKLA 301 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 302 ENYDEFEELPAIFPISGLTKQGLATLLDA 330 >gi|172079501|ref|ZP_02708105.2| Spo0B-associated GTP-binding protein [Streptococcus pneumoniae CDC1873-00] gi|172043361|gb|EDT51407.1| Spo0B-associated GTP-binding protein [Streptococcus pneumoniae CDC1873-00] Length = 436 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 142/329 (43%), Positives = 207/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVLTDLIEHGQEFIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HI+ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 244 HIIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLEEFKKKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 304 ENYDEFEELPAIFPISGLTKQGLATLLDA 332 >gi|50954531|ref|YP_061819.1| GTPase ObgE [Leifsonia xyli subsp. xyli str. CTCB07] gi|81612763|sp|Q6AFY1|OBG_LEIXX RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|50951013|gb|AAT88714.1| GTP-binding protein [Leifsonia xyli subsp. xyli str. CTCB07] Length = 514 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 139/340 (40%), Positives = 204/340 (60%), Gaps = 10/340 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V++R+G+GG G +S RREKF GPDGG+GG GGD+ + A + TL+ + + Sbjct: 4 FVDRVTVHLRAGNGGNGCVSVRREKFKPLAGPDGGNGGNGGDIVLVADPQVTTLLGYHRR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H + +G GM +RSG GED+ L VPVGT V +G L DL + G RI+ APGG Sbjct: 64 PHRSSGNGGFGMGDHRSGHTGEDLELPVPVGTVVKSSEGAEL-ADLTEPGMRIVAAPGGI 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA + +AP +A G G E I L+LK +ADI ++G P+AGKS+ +A+++ A Sbjct: 123 GGLGNAALSNPKRKAPGFALLGTPGWEGDILLELKTVADIALVGYPSAGKSSLIAALSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL+PNLG+V+ G + +AD+PG+I+ A +G G+G FL+H ER LLH Sbjct: 183 KPKIADYPFTTLHPNLGVVQVGDVRYTVADVPGLIEGASEGRGLGFEFLRHVERCSALLH 242 Query: 243 IV--SALE--ENVQAAYQCILDELSAY-----NSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++ + LE + + IL EL+AY L ++ +++ L++ID D+ LA Sbjct: 243 VLDCATLEPGRDPLSDLDVILAELAAYPVPEGQLPLLERPQLIALNKIDVPDARELADFL 302 Query: 294 NELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 G FE S+++ G+ + L + + R E Sbjct: 303 RPDLEARGYRVFEISTVSHEGLRPLSFALAELVERARKEQ 342 >gi|307709173|ref|ZP_07645632.1| GTP-binding protein Obg/CgtA [Streptococcus mitis SK564] gi|307620119|gb|EFN99236.1| GTP-binding protein Obg/CgtA [Streptococcus mitis SK564] Length = 434 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 142/329 (43%), Positives = 207/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 2 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + ++ DL + GQ I+A GG Sbjct: 62 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVLTDLIEHGQEFIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 122 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTQSGDSFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HIV SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 242 HIVDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLEEFKKKLA 301 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 302 ENYDEFEELPAIFPISGLTKQGLATLLDA 330 >gi|240047767|ref|YP_002961155.1| GTPase ObgE [Mycoplasma conjunctivae HRC/581] gi|239985339|emb|CAT05352.1| GTP-binding protein [Mycoplasma conjunctivae] Length = 416 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 134/297 (45%), Positives = 187/297 (62%), Gaps = 7/297 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLD+ K+ + +G GG G ISFRRE ++ GGPDGG GG GG ++ S LNTL++F Sbjct: 1 MKFLDQVKIQVEAGKGGNGVISFRREAHVDKGGPDGGDGGSGGSIYFVGDSGLNTLLNFY 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + K GE G +NR GA G D+ + VP+GTQV+ E+ L+CD+ +I A G Sbjct: 61 SLKIIKGNDGENGRSKNRYGAGGSDIFVKVPIGTQVYVEN--KLMCDVVTTKPYLI-AKG 117 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN FK++ N+AP + G LG+ + L LK++AD+G++G PNAGKST L+ ++ Sbjct: 118 GKGGRGNTKFKTAKNKAPRISENGDLGEFYELQLVLKVMADVGLVGKPNAGKSTLLSQIS 177 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIA+Y FTTL P LG+VK K F++AD+PG+I+ A QG G+G FLKH ER V+ Sbjct: 178 NAKPKIANYSFTTLVPQLGLVKLYDKSFVIADLPGLIEGASQGKGLGFTFLKHIERCRVI 237 Query: 241 LHIVS--ALEENVQAAYQCILDELSAYNSELRK--KIEIVGLSQIDTVDSDTLARKK 293 HI+ + E+N Y+ I EL+ +N L +I I S + + L+ KK Sbjct: 238 AHIIDFGSKEKNPIIDYENICKELNNFNPALSNLPQIIIANKSDLSEFSKNVLSFKK 294 >gi|242373944|ref|ZP_04819518.1| spo0B-associated GTP-binding protein [Staphylococcus epidermidis M23864:W1] gi|242348298|gb|EES39900.1| spo0B-associated GTP-binding protein [Staphylococcus epidermidis M23864:W1] Length = 430 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 136/333 (40%), Positives = 209/333 (62%), Gaps = 7/333 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVVFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE G N G ED+VL VP GT + D ++ DL ++GQR ++A GG Sbjct: 62 RHFKAKKGENGQSSNMHGKNAEDLVLKVPPGTIIKSVDTEEVLADLVEDGQRAVVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSENGEPGEELDVTLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + F++AD+PG+I+ A +G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDQRSFVMADLPGLIEGASEGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S E + Y+ I EL Y L + +IV +++D ++ + L K E+ Sbjct: 242 HMIDMSGSEGRDPIEDYKVINQELVNYKQRLEDRPQIVVANKMDIPEAEENLELFKEEIE 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +P S++T I Q+L + DK+ ++ Sbjct: 302 DDVTIIP--VSTVTRDNIDQLLYHIADKLEEVK 332 >gi|227524124|ref|ZP_03954173.1| GTP-binding protein [Lactobacillus hilgardii ATCC 8290] gi|227088755|gb|EEI24067.1| GTP-binding protein [Lactobacillus hilgardii ATCC 8290] Length = 436 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 134/328 (40%), Positives = 213/328 (64%), Gaps = 12/328 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G+GG G ++FRREKF+ GGP GG GGRGG + + S +NTL+DFRY Sbjct: 2 FVDQVKIDVQAGNGGNGIVAFRREKFVPNGGPAGGDGGRGGSIIFKVDSGMNTLMDFRYH 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++G G ++ +G +++++ VP GT V + +I DL + Q + +A GG Sbjct: 62 RKFKAKNGGDGGNKSMTGKSADNLIVPVPEGTIVTDTTTGEVIGDLLKPDQELTVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S+TN AP A G GQ + L+L+++AD+G++G P+AGKST L+ +T A Sbjct: 122 GGRGNIHFASATNPAPEIAENGEPGQAVSLSLELRVLADVGLVGFPSAGKSTLLSVITSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V+ + ++F +AD+PG+++ A +G G+G +FL+H ERT V+L Sbjct: 182 KPKIAGYHFTTLVPNLGMVRLDDGRDFAVADLPGLVEGASKGVGLGFQFLRHVERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H+V S +E + Y I EL Y+ ++ K+ +IV +++D ++ D L K++L Sbjct: 242 HLVDMSGVEGRDPYDDYLAINKELVEYDPDILKRPQIVVATKMDLPNAKDNLQIFKDKLT 301 Query: 298 ------TQCGQVPFEFSSITGHGIPQIL 319 T+ +V SS+T G+ +++ Sbjct: 302 SGHSVDTELPEV-LAISSVTHAGLSELI 328 >gi|225856723|ref|YP_002738234.1| GTPase ObgE [Streptococcus pneumoniae P1031] gi|225725339|gb|ACO21191.1| Spo0B-associated GTP-binding protein [Streptococcus pneumoniae P1031] Length = 434 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 141/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 2 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + ++ DL + GQ I+A GG Sbjct: 62 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVLTDLIEHGQEFIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 122 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HI+ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 242 HIIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLEEFKKKLA 301 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 302 ENYDEFEELPAIFPISGLTKQGLATLLDA 330 >gi|139473621|ref|YP_001128337.1| GTPase ObgE [Streptococcus pyogenes str. Manfredo] gi|261263112|sp|A2RE30|OBG_STRPG RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|134271868|emb|CAM30105.1| putative GTP-binding protein [Streptococcus pyogenes str. Manfredo] Length = 437 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 64 RKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGIGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQENLKAFKKKLA 303 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILEC 321 Q + +P F SS+ G+ +LE Sbjct: 304 AQYDEFDDLPMIFPISSLAHQGLENLLEA 332 >gi|149019681|ref|ZP_01835000.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae SP23-BS72] gi|225858892|ref|YP_002740402.1| GTPase ObgE [Streptococcus pneumoniae 70585] gi|307705127|ref|ZP_07642004.1| GTP-binding protein Obg/CgtA [Streptococcus mitis SK597] gi|307708629|ref|ZP_07645093.1| Spo0B-associated GTP-binding protein [Streptococcus mitis NCTC 12261] gi|147931056|gb|EDK82036.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae SP23-BS72] gi|225721966|gb|ACO17820.1| Spo0B-associated GTP-binding protein [Streptococcus pneumoniae 70585] gi|307615378|gb|EFN94587.1| Spo0B-associated GTP-binding protein [Streptococcus mitis NCTC 12261] gi|307621323|gb|EFO00383.1| GTP-binding protein Obg/CgtA [Streptococcus mitis SK597] Length = 434 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 141/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 2 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + ++ DL + GQ I+A GG Sbjct: 62 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVLTDLIEHGQEFIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 122 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HI+ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 242 HIIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLEEFKKKLA 301 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 302 ENYDEFEELPAIFPISGLTKQGLATLLDA 330 >gi|116628201|ref|YP_820820.1| GTPase ObgE [Streptococcus thermophilus LMD-9] gi|81820258|sp|Q5LYR4|OBG_STRT1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|81820424|sp|Q5M3C8|OBG_STRT2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|122267203|sp|Q03JJ8|OBG_STRTD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|55737465|gb|AAV61107.1| GTP-binding protein, GTP1/Obg family [Streptococcus thermophilus LMG 18311] gi|55739394|gb|AAV63035.1| GTP-binding protein, GTP1/Obg family [Streptococcus thermophilus CNRZ1066] gi|116101478|gb|ABJ66624.1| Predicted GTPase [Streptococcus thermophilus LMD-9] gi|312278818|gb|ADQ63475.1| GTPase obg [Streptococcus thermophilus ND03] Length = 437 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 135/329 (41%), Positives = 207/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++GEKGM + G ED+++++P GT V + + +I D+ ++GQ ++A GG Sbjct: 64 RKFKAKNGEKGMTKGMHGRGAEDLIVSIPPGTTVRDAETGKVITDMVEDGQEFVVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERELQLELKILADVGLVGFPSVGKSTILSVVTAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGESFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIVSALEENVQAAYQCILD---ELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ + Y+ L EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLQINKELETYNLRLMERPQIIVANKMDMPEAEENLKEFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+ G+ +LE Sbjct: 304 ANYDEFDELPQIFPISSLAHQGLENLLEA 332 >gi|162139180|ref|YP_602675.2| GTPase ObgE [Streptococcus pyogenes MGAS10750] Length = 435 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 207/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 2 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 62 RKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGIGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 242 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQENLKAFKKKLA 301 Query: 298 TQCGQ-----VPFEFSSITGHGIPQILEC 321 Q + + F SS+ G+ +LE Sbjct: 302 AQYDEFDDLPMIFPISSLAHQGLENLLEA 330 >gi|325270209|ref|ZP_08136816.1| Spo0B-associated GTP-binding protein [Prevotella multiformis DSM 16608] gi|324987510|gb|EGC19486.1| Spo0B-associated GTP-binding protein [Prevotella multiformis DSM 16608] Length = 390 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 139/322 (43%), Positives = 208/322 (64%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+Y RSG GG G + R K+ GGPDGG GG+GG V+++ N TL+ +YQ Sbjct: 6 FVDYVKIYCRSGKGGRGSMHLRHVKYNPNGGPDGGDGGKGGSVYLRGNHNYWTLLHLKYQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H A+HG G + G G+DV + VP GT V++ + +CD+ +GQ ++L GG Sbjct: 66 RHVYAEHGGNGGRDKCHGTDGKDVYIDVPCGTVVYDAETGKYVCDVMHDGQTVLLLKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F+++TNQAP YA PG QE I L+LKL+AD+G++G PNAGKST L+S++ A Sbjct: 126 GGLGNFQFRTATNQAPRYAQPGEPMQEMTIILELKLLADVGLVGFPNAGKSTLLSSLSSA 185 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+YPFTT+ P+LGIV + F++ADIPGII+ A +G G+G RFL+H ER +LL Sbjct: 186 RPKIANYPFTTMEPSLGIVSYRDSQSFVMADIPGIIEGASEGKGLGLRFLRHIERNSLLL 245 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + L T Sbjct: 246 FMVPGDTDDIRKEYEILLNELKQFNPEMLDKHRVLAVTKCDLLDEELIDLLHETLPT--- 302 Query: 302 QVPFEF-SSITGHGIPQILECL 322 +P F SS+TG GI ++ + L Sbjct: 303 DLPVVFISSVTGQGIDELKDRL 324 >gi|261263111|sp|Q1J652|OBG_STRPF RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|94548085|gb|ABF38131.1| GTP-binding protein CgtA [Streptococcus pyogenes MGAS10750] Length = 437 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 207/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 64 RKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGIGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQENLKAFKKKLA 303 Query: 298 TQCGQ-----VPFEFSSITGHGIPQILEC 321 Q + + F SS+ G+ +LE Sbjct: 304 AQYDEFDDLPMIFPISSLAHQGLENLLEA 332 >gi|161611282|ref|YP_139922.2| GTPase ObgE [Streptococcus thermophilus LMG 18311] gi|161936365|ref|YP_141850.2| GTPase ObgE [Streptococcus thermophilus CNRZ1066] Length = 435 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 135/329 (41%), Positives = 207/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 2 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++GEKGM + G ED+++++P GT V + + +I D+ ++GQ ++A GG Sbjct: 62 RKFKAKNGEKGMTKGMHGRGAEDLIVSIPPGTTVRDAETGKVITDMVEDGQEFVVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 122 GGRGNIRFATPRNPAPEIAENGEPGEERELQLELKILADVGLVGFPSVGKSTILSVVTAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTKSGESFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIVSALEENVQAAYQCILD---ELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ + Y+ L EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 242 HVIDMSASEGRDPYEDYLQINKELETYNLRLMERPQIIVANKMDMPEAEENLKEFKEKLA 301 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+ G+ +LE Sbjct: 302 ANYDEFDELPQIFPISSLAHQGLENLLEA 330 >gi|148657678|ref|YP_001277883.1| GTP1/OBG domain-containing protein [Roseiflexus sp. RS-1] gi|261263060|sp|A5UZ80|OBG_ROSS1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|148569788|gb|ABQ91933.1| GTP1/OBG sub domain protein [Roseiflexus sp. RS-1] Length = 439 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 140/329 (42%), Positives = 207/329 (62%), Gaps = 6/329 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D A++++++GDGG G +FRREK++ GGPDGG GGRGG +++ A LNTL+ FR + Sbjct: 5 FYDYARIFVQAGDGGDGAATFRREKYVPRGGPDGGDGGRGGHIYLVADPGLNTLLPFRER 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEE-DGISLICDLDQEGQRIILAPGG 121 F A+ G G + + G G DV + VPVGT DG + DLD G +++ A GG Sbjct: 65 TRFVAERGGNGGRSRKHGRNGRDVFIRVPVGTVARTIIDGETYTVDLDAPGLQLLAARGG 124 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN HF +S+ Q P A G G+ + I L+LKL+AD+G++G PNAGKST L+ ++ Sbjct: 125 RGGLGNVHFATSSYQVPRIAELGEPGERREIELELKLLADVGLVGFPNAGKSTLLSVISA 184 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A+PKIA YPFTTL PNLG+V+ G F++ADIPG+I+ AH+G G+G FL+H ERT +L+ Sbjct: 185 ARPKIAPYPFTTLQPNLGVVEVGDYSFVVADIPGLIEGAHRGVGLGFSFLRHIERTRLLI 244 Query: 242 HIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT-LARKKNELA 297 HI+ A + + I +EL Y EL ++ +IV L++ D ++ L+R ++ L Sbjct: 245 HIIDAAGVDGRDPVGDFHAINEELRLYQPELAQRPQIVALNKADLPEAQANLSRLRHALP 304 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI 326 V F S+ T G+ +L+ + ++ Sbjct: 305 LPDHDV-FVISAATREGVDALLQRVAGRL 332 >gi|149006248|ref|ZP_01829960.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae SP18-BS74] gi|307127390|ref|YP_003879421.1| Spo0B-associated GTP-binding protein [Streptococcus pneumoniae 670-6B] gi|147762025|gb|EDK68987.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae SP18-BS74] gi|306484452|gb|ADM91321.1| Spo0B-associated GTP-binding protein [Streptococcus pneumoniae 670-6B] gi|332075034|gb|EGI85505.1| GTP-binding protein Obg/CgtA [Streptococcus pneumoniae GA17545] Length = 434 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 141/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 2 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + ++ DL + GQ I+A GG Sbjct: 62 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVLTDLIKHGQEFIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 122 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HI+ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 242 HIIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLEEFKKKLA 301 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 302 ENYDEFEELPAIFPISGLTKQGLATLLDA 330 >gi|306825373|ref|ZP_07458713.1| obg family GTPase CgtA [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432311|gb|EFM35287.1| obg family GTPase CgtA [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 467 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 141/329 (42%), Positives = 207/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 35 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 94 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + +I DL GQ I+A GG Sbjct: 95 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVITDLIAHGQEFIVAHGGR 154 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 155 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 214 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 215 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 274 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 275 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLKTFKEKLA 334 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 335 ANYDEFEELPAIFPISGLTKQGLATLLDA 363 >gi|304373010|ref|YP_003856219.1| GTPase obg [Mycoplasma hyorhinis HUB-1] gi|304309201|gb|ADM21681.1| GTPase obg [Mycoplasma hyorhinis HUB-1] Length = 418 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 130/284 (45%), Positives = 185/284 (65%), Gaps = 5/284 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D+ K+ I +G GG G ISFRRE +++ GGPDGG GG GG ++ S LNTL+ Sbjct: 1 MKFIDQVKIKIAAGKGGDGVISFRREAYVDRGGPDGGDGGDGGSIFFVGDSGLNTLLSLH 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q K GE G +NR GAKGED+ + VP+GT VF++ LICD+ +E + ++A G Sbjct: 61 NEQIIKGNDGENGKSKNRYGAKGEDIFVKVPLGTLVFDDK--KLICDVVEE-KPYLVAKG 117 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN FKSS N+AP + G LGQ + L LK++AD+G +G P+AGKST L +++ Sbjct: 118 GRGGRGNTKFKSSKNKAPRISENGDLGQSFNLTLNLKVLADVGFVGKPSAGKSTVLEAIS 177 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADY FTTL P LG+VK K F+ AD+PG+I A G G+G FLKH ER + Sbjct: 178 NAKPKIADYEFTTLVPQLGLVKYYDKSFVAADLPGLIAGASLGKGLGFVFLKHIERCKAI 237 Query: 241 LHIVS--ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 HI+ + ++N + ++ I +EL +N +L+ +++ ++ D Sbjct: 238 AHIIDFGSEDKNPISDFELINNELFKFNEKLKNVQQVIVANKND 281 >gi|282908964|ref|ZP_06316782.1| obg family GTPase CgtA [Staphylococcus aureus subsp. aureus WW2703/97] gi|282327228|gb|EFB57523.1| obg family GTPase CgtA [Staphylococcus aureus subsp. aureus WW2703/97] Length = 287 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 125/285 (43%), Positives = 187/285 (65%), Gaps = 6/285 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVVFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE G N G ED+VL VP GT + + ++ DL ++GQR ++A GG Sbjct: 62 RHFKASKGENGQSSNMHGKNAEDLVLKVPPGTIIKNVETDEVLADLVEDGQRAVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDQRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 H++ S E ++ Y+ I EL+AY L + +IV +++D Sbjct: 242 HMIDMSGSEGREPIE-DYKVINQELAAYEQRLEDRPQIVVANKMD 285 >gi|182684171|ref|YP_001835918.1| GTP1/Obg family GTP-binding protein [Streptococcus pneumoniae CGSP14] gi|307067739|ref|YP_003876705.1| putative GTPase [Streptococcus pneumoniae AP200] gi|261277708|sp|B2IQ29|OBG_STRPS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|182629505|gb|ACB90453.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae CGSP14] gi|306409276|gb|ADM84703.1| Predicted GTPase [Streptococcus pneumoniae AP200] Length = 436 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 141/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVLTDLIEHGQEFIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HI+ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 244 HIIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLEDFKKKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 304 ENYDEFEELPAIFPISGLTKQGLATLLDA 332 >gi|332296186|ref|YP_004438109.1| GTPase obg [Thermodesulfobium narugense DSM 14796] gi|332179289|gb|AEE14978.1| GTPase obg [Thermodesulfobium narugense DSM 14796] Length = 336 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 120/286 (41%), Positives = 185/286 (64%), Gaps = 1/286 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D A+V G GG G +SFR+EK++ GGPDGG GGRG ++++ A+ ++ L F+ Sbjct: 8 FPDTARVKFVGGHGGRGCVSFRKEKYVPKGGPDGGDGGRGANIYLVASREVSDLSFFKSN 67 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 Q F+ ++GE G + G +D+ + VP+GT V + D +ICDLD G+ ++A GG Sbjct: 68 QEFRGKNGEPGSSKKMHGKDAQDLYINVPIGTLVRDLDTNEIICDLDYNGKVFLVAKGGK 127 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN++F + TN+ P+YA G G+EK + L+LK+IAD +IG PNAGKS+ L ++T A Sbjct: 128 GGLGNSNFATPTNRVPHYAQDGEPGEEKNVLLELKIIADASLIGFPNAGKSSLLNALTNA 187 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 K + +Y FTT+ P LG++ K +LADIPGII+ A +G G+G+ FL+H ER++ L+ Sbjct: 188 KAIVGEYSFTTIKPVLGVLSNDEKSIVLADIPGIIEGASKGKGLGNIFLRHIERSNFLIF 247 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT 288 ++ A + ++ Y I+ EL YN L +K I+ L++ D +D +T Sbjct: 248 VLDASLDPIK-YYNIIIKELEQYNKNLLQKKRIILLNKRDLIDKNT 292 >gi|169833915|ref|YP_001694504.1| GTPase ObgE [Streptococcus pneumoniae Hungary19A-6] gi|261263113|sp|B1IBL9|OBG_STRPI RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|168996417|gb|ACA37029.1| Spo0B-associated GTP-binding protein [Streptococcus pneumoniae Hungary19A-6] Length = 434 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 206/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 2 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + ++ DL + GQ I+A GG Sbjct: 62 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVLTDLIEHGQEFIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 122 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS----DTLARKKN 294 HI+ SA E + Y I EL +YN L ++ +I+ +++D +S + +K Sbjct: 242 HIIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLEDFKKKLA 301 Query: 295 ELATQCGQVP--FEFSSITGHGIPQILEC 321 E + ++P F S +T G+ +L+ Sbjct: 302 ENYDEFEELPAIFPISGLTKQGLATLLDA 330 >gi|322516332|ref|ZP_08069258.1| Spo0B-associated GTP-binding protein [Streptococcus vestibularis ATCC 49124] gi|322125170|gb|EFX96559.1| Spo0B-associated GTP-binding protein [Streptococcus vestibularis ATCC 49124] Length = 437 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 135/329 (41%), Positives = 206/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVKAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++GEKGM + G ED+++++P GT V + + +I D+ ++GQ I+ GG Sbjct: 64 RKFKAKNGEKGMTKGMHGRGAEDLIVSIPPGTTVRDAETGKVITDMVEDGQEFIVVHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERELQLELKILADVGLVGFPSVGKSTILSVVTAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGESFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIVSALEENVQAAYQCILD---ELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ + Y+ L EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLQINKELETYNLRLMERPQIIVANKMDMPEAEENLKEFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+ G+ +LE Sbjct: 304 ANYDEFDELPQIFPISSLAHQGLENLLEA 332 >gi|15900948|ref|NP_345552.1| GTPase ObgE [Streptococcus pneumoniae TIGR4] gi|111657927|ref|ZP_01408637.1| hypothetical protein SpneT_02000904 [Streptococcus pneumoniae TIGR4] gi|148985050|ref|ZP_01818293.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae SP3-BS71] gi|148998345|ref|ZP_01825787.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae SP11-BS70] gi|168576196|ref|ZP_02722090.1| Spo0B-associated GTP-binding protein [Streptococcus pneumoniae MLV-016] gi|194397798|ref|YP_002037710.1| GTPase ObgE [Streptococcus pneumoniae G54] gi|303256082|ref|ZP_07342102.1| GTPase ObgE [Streptococcus pneumoniae BS455] gi|303260617|ref|ZP_07346582.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae SP-BS293] gi|303263029|ref|ZP_07348962.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae SP14-BS292] gi|303264876|ref|ZP_07350792.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae BS397] gi|303266904|ref|ZP_07352781.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae BS457] gi|303269122|ref|ZP_07354902.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae BS458] gi|81855029|sp|Q97QW8|OBG_STRPN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263107|sp|B5E4J4|OBG_STRP4 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|14972554|gb|AAK75192.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae TIGR4] gi|147755742|gb|EDK62787.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae SP11-BS70] gi|147922748|gb|EDK73865.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae SP3-BS71] gi|183578008|gb|EDT98536.1| Spo0B-associated GTP-binding protein [Streptococcus pneumoniae MLV-016] gi|194357465|gb|ACF55913.1| GTP-binding protein Obg/CgtA [Streptococcus pneumoniae G54] gi|301800052|emb|CBW32646.1| putative GTP-binding protein [Streptococcus pneumoniae OXC141] gi|301802029|emb|CBW34759.1| putative GTP-binding protein [Streptococcus pneumoniae INV200] gi|302596929|gb|EFL64055.1| GTPase ObgE [Streptococcus pneumoniae BS455] gi|302635856|gb|EFL66358.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae SP14-BS292] gi|302638267|gb|EFL68737.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae SP-BS293] gi|302641371|gb|EFL71738.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae BS458] gi|302643537|gb|EFL73807.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae BS457] gi|302645564|gb|EFL75795.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae BS397] gi|332200542|gb|EGJ14614.1| GTP-binding protein Obg/CgtA [Streptococcus pneumoniae GA41317] Length = 434 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 141/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 2 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + ++ DL + GQ I+A GG Sbjct: 62 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVLTDLIEHGQEFIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 122 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HI+ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 242 HIIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLEDFKKKLA 301 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 302 ENYDEFEELPAIFPISGLTKQGLATLLDA 330 >gi|148994173|ref|ZP_01823488.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae SP9-BS68] gi|168488921|ref|ZP_02713120.1| Spo0B-associated GTP-binding protein [Streptococcus pneumoniae SP195] gi|147927416|gb|EDK78446.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae SP9-BS68] gi|183572485|gb|EDT93013.1| Spo0B-associated GTP-binding protein [Streptococcus pneumoniae SP195] gi|332073437|gb|EGI83916.1| GTP-binding protein Obg/CgtA [Streptococcus pneumoniae GA17570] Length = 434 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 141/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 2 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + ++ DL + GQ I+A GG Sbjct: 62 RHFKADSGEKGMTKGMHGRGAEDLRVLVPQGTTVRDAETGKVLTDLIEHGQEFIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 122 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HI+ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 242 HIIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLEEFKKKLA 301 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 302 ENYDEFEELPAIFPISGLTKQGLVTLLDA 330 >gi|228477263|ref|ZP_04061901.1| Obg family GTPase CgtA [Streptococcus salivarius SK126] gi|228251282|gb|EEK10453.1| Obg family GTPase CgtA [Streptococcus salivarius SK126] Length = 437 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 135/329 (41%), Positives = 206/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVKAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++GEKGM + G ED+++++P GT V + + +I D+ ++GQ ++A GG Sbjct: 64 RKFKAKNGEKGMTKGMHGRGAEDLIVSIPPGTTVRDAETGKVITDMVEDGQEFVIAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERELQLELKILADVGLVGFPSVGKSTILSVVTAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGESFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIVSALEENVQAAYQCILD---ELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ + Y+ L EL YN L ++ +I+ +++D + + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLQINKELETYNLRLMERPQIIVANKMDMPGAEENLKEFKEKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F SS+ G+ +LE Sbjct: 304 ANYDEFDELPQIFPISSLAHQGLENLLEA 332 >gi|146320600|ref|YP_001200311.1| GTPase ObgE [Streptococcus suis 98HAH33] gi|253751550|ref|YP_003024691.1| GTP-binding protein [Streptococcus suis SC84] gi|253753451|ref|YP_003026592.1| GTP-binding protein [Streptococcus suis P1/7] gi|253755721|ref|YP_003028861.1| GTP-binding protein [Streptococcus suis BM407] gi|261277710|sp|A4W0M2|OBG_STRS2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|145691406|gb|ABP91911.1| Predicted GTPase [Streptococcus suis 98HAH33] gi|251815839|emb|CAZ51447.1| putative GTP-binding protein [Streptococcus suis SC84] gi|251818185|emb|CAZ55986.1| putative GTP-binding protein [Streptococcus suis BM407] gi|251819697|emb|CAR45501.1| putative GTP-binding protein [Streptococcus suis P1/7] gi|292558197|gb|ADE31198.1| GTP-binding protein, GTP1/Obg family [Streptococcus suis GZ1] gi|319757982|gb|ADV69924.1| GTPase ObgE [Streptococcus suis JS14] Length = 437 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 140/329 (42%), Positives = 205/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG GG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGKGGDGMVAFRREKYVPNGGPWGGDGGHGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA GEKGM + G ED+++ VP GT V + D +I DL + GQ ++A GG Sbjct: 64 RRFKADDGEKGMTKGMHGRGAEDLIVRVPQGTTVRDADTGKIITDLVENGQEFVIAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G G+E+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGEERNLELELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT-LARKKNELA 297 H+ +SA E + Y I +EL YN L ++ +I+ +++D +++ L K +LA Sbjct: 244 HVLDMSASEGRDPYEDYVAINNELETYNLRLMERPQIIVANKMDMPEAEEHLEEFKKKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 T + ++P F S I G+ +LE Sbjct: 304 TNYDEFEELPQIFPISGIAHQGLENLLEA 332 >gi|307274993|ref|ZP_07556156.1| Obg family GTPase CgtA [Enterococcus faecalis TX2134] gi|306508441|gb|EFM77548.1| Obg family GTPase CgtA [Enterococcus faecalis TX2134] Length = 432 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 140/329 (42%), Positives = 209/329 (63%), Gaps = 7/329 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 2 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVVLVVEEGLRTLMDFRFN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM + G ED+++ VP GT V + + +LI DL + GQ +++A GG Sbjct: 62 RHFKATPGENGMSKGMHGRGSEDLLVKVPPGTTVRDAETGALIGDLIENGQTLVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 122 GGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 RPKIGAYHFTTLVPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I EL+++N L ++ +I+ +++D ++ + LA+ K +LA Sbjct: 242 HVIDMSGMEGRDPYEDYLAINKELASHNLRLMERPQIIVANKMDMPEAEENLAKFKEQLA 301 Query: 298 TQ-CGQVP-FEFSSITGHGIPQILECLHD 324 + ++P F S +T GI +L D Sbjct: 302 KERTDELPIFPISGVTRKGIEPLLNATAD 330 >gi|146318405|ref|YP_001198117.1| GTPase ObgE [Streptococcus suis 05ZYH33] gi|261277713|sp|A4VUC8|OBG_STRSY RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|145689211|gb|ABP89717.1| Predicted GTPase [Streptococcus suis 05ZYH33] Length = 437 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 140/329 (42%), Positives = 205/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG GG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGKGGDGMVAFRREKYVPNGGPWGGDGGHGGNVVFVVDEGLRTLMDFRYH 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA GEKGM + G ED+++ VP GT V + D +I DL + GQ ++A GG Sbjct: 64 RRFKADDGEKGMTKGMHGRGAEDLIVRVPQGTTVRDADTGKIITDLVENGQEFVIAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G G+E+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGEERNLELELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT-LARKKNELA 297 H+ +SA E + Y I +EL YN L ++ +I+ +++D +++ L K +LA Sbjct: 244 HVLDMSASEGRDPYEDYVAINNELETYNLRLMERPQIIVANKMDMPEAEEHLEEFKKKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 T + ++P F S I G+ +LE Sbjct: 304 TNYDEFEELPQIFPISGIAHQGLENLLEA 332 >gi|260887928|ref|ZP_05899191.1| Obg family GTPase CgtA [Selenomonas sputigena ATCC 35185] gi|330838582|ref|YP_004413162.1| GTP-binding protein Obg/CgtA [Selenomonas sputigena ATCC 35185] gi|260862328|gb|EEX76828.1| Obg family GTPase CgtA [Selenomonas sputigena ATCC 35185] gi|329746346|gb|AEB99702.1| GTP-binding protein Obg/CgtA [Selenomonas sputigena ATCC 35185] Length = 429 Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 132/337 (39%), Positives = 212/337 (62%), Gaps = 6/337 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D AK+ +++GDGG G +FRREKFI GGP GG GGRG D+ N+NTL+DFR Sbjct: 1 MQFIDRAKISVKAGDGGKGKSAFRREKFIPKGGPSGGDGGRGADIVFVVDRNMNTLLDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + FK + G G +N +GA E ++ VP GT V + +++ DL + GQ ++A Sbjct: 61 YHRKFKGKDGGNGDIKNMTGANAEPCIIKVPPGTLVKDAATGAVLADLTEVGQEAVIAKA 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F +S N+AP +A G G+ K + L+LKL+AD+G++G P+ GKS+ + +V+ Sbjct: 121 GRGGRGNARFSNSANRAPTFAELGEPGESKELLLELKLLADVGLVGYPSVGKSSLITAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P++A Y FTTL P LG+V+ Y K F++ADIPG+I+ A GAG+G FL+H ERT + Sbjct: 181 AARPEVAAYHFTTLVPVLGVVQTDYEKNFVMADIPGLIEGAADGAGLGHDFLRHVERTRL 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 +LH+V A + V+ Y+ I EL Y+ ++ + +I+ +++D ++ + Sbjct: 241 ILHLVDASGIEGRDPVEDYYR-INAELKKYSEKIAARTQILVANKMDLPEAAENLPRLEA 299 Query: 296 LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 LA + G F S+ G+ ++++ + + + +++ E Sbjct: 300 LAKKEGIRIFAVSAAAHQGLKELIDYVGETLETLKDE 336 >gi|148989122|ref|ZP_01820512.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae SP6-BS73] gi|147925345|gb|EDK76423.1| GTP-binding protein, GTP1/Obg family [Streptococcus pneumoniae SP6-BS73] Length = 434 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 206/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 2 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + ++ DL + GQ I+A GG Sbjct: 62 RHFKADSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVLTDLIEHGQEFIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 122 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+ Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIF 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS----DTLARKKN 294 HI+ SA E + Y I EL +YN L ++ +I+ +++D +S + +K + Sbjct: 242 HIIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLEEFKKKLS 301 Query: 295 ELATQCGQVP--FEFSSITGHGIPQILEC 321 E + ++P F S +T G+ +L+ Sbjct: 302 ENYDEFEELPAIFPISGLTKQGLATLLDA 330 >gi|227503070|ref|ZP_03933119.1| GTP-binding protein [Corynebacterium accolens ATCC 49725] gi|227076131|gb|EEI14094.1| GTP-binding protein [Corynebacterium accolens ATCC 49725] Length = 510 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 132/328 (40%), Positives = 199/328 (60%), Gaps = 15/328 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++++GDGG G +S REKF GGPDGG+GG GGD+ ++ + ++TL+DF Y Sbjct: 3 RFIDRVVLHLQAGDGGHGCVSVHREKFKPLGGPDGGNGGHGGDIILEVSEQIHTLMDFHY 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H KA+ G G R+GA+GED++L VP GT V E G +L DL G R + A GG Sbjct: 63 RPHIKAERGGNGAGDMRNGARGEDLILEVPAGTVVRTEKGETL-ADLTVPGTRFVAAEGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G GQ + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 FGGLGNAALASKNRKAPGFALQGEPGQAHDLVLELKSMADVGLVGFPSAGKSSLISVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKI DYPFTTL PNLG+V G F +AD+PG+I A G G+G FL+H ERT VL Sbjct: 182 AKPKIGDYPFTTLQPNLGVVDMGDSSFTIADVPGLIPGAADGKGLGLDFLRHIERTAVLA 241 Query: 242 HIVSALE----ENVQAAYQCILDELSAYNS---------ELRKKIEIVGLSQIDTVDSDT 288 H+V + ++ + + +EL+ Y +LR++ ++ L++ D +++ Sbjct: 242 HVVDTASIEPGRDPESDIEALENELAKYQEALESDTGLGDLRERPRVIILNKADVPEAEE 301 Query: 289 LAR-KKNELATQCGQVPFEFSSITGHGI 315 LA K++L + G F S+ G+ Sbjct: 302 LAEFVKDDLKEKFGWPVFIISAAARKGL 329 >gi|260583947|ref|ZP_05851695.1| Obg family GTPase CgtA [Granulicatella elegans ATCC 700633] gi|260158573|gb|EEW93641.1| Obg family GTPase CgtA [Granulicatella elegans ATCC 700633] Length = 436 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 130/291 (44%), Positives = 192/291 (65%), Gaps = 4/291 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D A +++++GDGG G ++FRREK++ GGP GG GGRGG V + S L TL+DFR++ Sbjct: 4 FYDRATIWVKAGDGGNGMVAFRREKYVPDGGPAGGDGGRGGSVIFKVDSGLRTLLDFRHK 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE GM ++ G +D+++ VP GT V LI DL + Q +++A GG Sbjct: 64 RHFKAKPGENGMSKSMYGRGADDLIVKVPAGTIVRNAQTKELIADLVEVDQEVVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 124 GGRGNIRFATHKNPAPDIAENGEPGEEFEIELELKVLADVGLVGFPSVGKSTLLSVISSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL P LG+ + ++F++AD+PG+I+ AH G G+G FLKH ERT VLL Sbjct: 184 KPKIADYHFTTLNPQLGMTQAPNGEQFVVADLPGLIEGAHMGVGLGIHFLKHIERTKVLL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 H++ +++E N YQ I+ EL +Y+ L ++ I+ +++D S+ L Sbjct: 244 HVIDMASMEGRNPYEDYQVIMQELGSYHLRLLERPMIIVANKMDQPQSEEL 294 >gi|211908963|gb|ACJ12776.1| CgtA [Vibrio alginolyticus] Length = 345 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 122/287 (42%), Positives = 183/287 (63%), Gaps = 8/287 (2%) Query: 45 VWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISL 104 V+IQA NLNTLID+R+Q+ ++A+ GE G N +G +G+D+VL VPVGT+ + + Sbjct: 17 VYIQADENLNTLIDYRFQRFYEAERGENGRGGNCTGKRGKDIVLRVPVGTRAVDIHTNEI 76 Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 + ++ + G+++++A GG G GN FKSS N+AP G G+ + I L+L L+AD+G+ Sbjct: 77 VAEVAEHGKKVMIAKGGWHGLGNTRFKSSVNRAPRQRTLGTKGEVREIRLELLLLADVGM 136 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQG 223 +GLPNAGKSTF+ +V+ AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A G Sbjct: 137 LGLPNAGKSTFIRAVSAAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADG 196 Query: 224 AGIGDRFLKHTERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 AG+G RFLKH ER VLLH++ + + VQ A I+DEL Y+ +L K + + Sbjct: 197 AGLGIRFLKHLERCRVLLHMIDIMPIDQSDPVQNAL-TIIDELEQYSEKLASKPRWLVFN 255 Query: 280 QIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHD 324 ++D + + K E+ G F+ S+I +G ++ L D Sbjct: 256 KVDLMPEEEANEKIQEILDALGWEDEYFKISAINRNGTKELCYKLAD 302 >gi|306836695|ref|ZP_07469659.1| GTP-binding protein [Corynebacterium accolens ATCC 49726] gi|304567434|gb|EFM43035.1| GTP-binding protein [Corynebacterium accolens ATCC 49726] Length = 510 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 132/328 (40%), Positives = 199/328 (60%), Gaps = 15/328 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++++GDGG G +S REKF GGPDGG+GG GGD+ ++ + ++TL+DF Y Sbjct: 3 RFIDRVVLHLQAGDGGHGCVSVHREKFKPLGGPDGGNGGHGGDIILEVSQQIHTLMDFHY 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H KA+ G G R+GA+GED++L VP GT V E G +L DL G R + A GG Sbjct: 63 RPHIKAERGGNGAGDMRNGARGEDLILEVPAGTVVRTEKGETL-ADLTVPGTRFVAAEGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G GQ + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 FGGLGNAALASKNRKAPGFALQGEPGQAHDLVLELKSMADVGLVGFPSAGKSSLISVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKI DYPFTTL PNLG+V G F +AD+PG+I A G G+G FL+H ERT VL Sbjct: 182 AKPKIGDYPFTTLQPNLGVVDMGDSSFTIADVPGLIPGAADGKGLGLDFLRHIERTAVLA 241 Query: 242 HIVSALE----ENVQAAYQCILDELSAYNS---------ELRKKIEIVGLSQIDTVDSDT 288 H+V + ++ + + +EL+ Y +LR++ ++ L++ D +++ Sbjct: 242 HVVDTASIEPGRDPESDIEALENELAKYQEALESDTGLGDLRERPRVIILNKADVPEAEE 301 Query: 289 LAR-KKNELATQCGQVPFEFSSITGHGI 315 LA K++L + G F S+ G+ Sbjct: 302 LAEFVKDDLKEKFGWPVFIISAAARKGL 329 >gi|319745448|gb|EFV97754.1| Spo0B-associated GTP-binding protein [Streptococcus agalactiae ATCC 13813] Length = 437 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 137/329 (41%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVKAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVNEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++FKA+ GEKGM + G ED+++++P GT V + + +I DL + Q ++A GG Sbjct: 64 RNFKAKAGEKGMTKGMHGRGAEDLIVSLPPGTTVRDANTGKVITDLVEHDQEFVVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERELQLELKILADVGLVGFPSVGKSTLLSVVSAA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D DS + LA K +LA Sbjct: 244 HVIDMSASEGRDPYDDYVSINNELETYNLRLMERPQIIVANKMDMPDSEENLAAFKEKLA 303 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILEC 321 + +P F SS+ G+ +++ Sbjct: 304 ANYDEFDDIPMIFPISSLAHQGLENLMDA 332 >gi|307128666|ref|YP_003880696.1| GTP-binding protein [Candidatus Sulcia muelleri CARI] gi|306483128|gb|ADM89998.1| GTP-binding protein [Candidatus Sulcia muelleri CARI] Length = 326 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 124/287 (43%), Positives = 201/287 (70%), Gaps = 2/287 (0%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 KF+D K+Y +SG+GG+G I FRREKFI GGPDGG GG+GG+V I+ + L T+ +Y Sbjct: 4 KFIDFIKIYCKSGNGGSGLIHFRREKFIHKGGPDGGDGGKGGNVIIKGNNQLYTISHLKY 63 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 ++H A++G+ G +G+ G+D ++ VP+GT + +E ++I ++ ++ IL GG Sbjct: 64 KKHNIAENGKNGGINRITGSNGKDCIIEVPIGTLIKDEYK-NIIMEILNHNEKKILLYGG 122 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN HFK++ QAP+Y+ G + +E +L+LK++AD+GIIG PN+GKST ++ +T Sbjct: 123 KGGKGNWHFKNAICQAPFYSEKGKIVKEFCFFLELKILADVGIIGFPNSGKSTLISIITS 182 Query: 182 AKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +KPKI++YPFTTL PN+GI+ + +K+ ++ADIPGIIK A +G G+G +F+KH +R ++ Sbjct: 183 SKPKISNYPFTTLNPNIGILNYKKFKKLVIADIPGIIKGASKGKGLGFKFIKHIQRNRII 242 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 L ++S E+N Y IL+EL+ ++ + KK ++ +S+ D +D++ Sbjct: 243 LIMISCEEKNYIKEYNIILNELNYFDPNILKKKRLLLISKSDYLDNE 289 >gi|203288208|ref|YP_002223223.1| GTP-binding protein Obg [Borrelia recurrentis A1] gi|261266684|sp|B5RQB8|OBG_BORRA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|201085428|gb|ACH95002.1| GTP-binding protein Obg [Borrelia recurrentis A1] Length = 327 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 118/280 (42%), Positives = 179/280 (63%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + SG+GGAG +SF REKF GGPDGG GGRGGDV + SNL TL +R Sbjct: 4 FKDSLNLIVSSGNGGAGCVSFLREKFKAKGGPDGGDGGRGGDVIFKVKSNLKTLSLYRNG 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 Q A +G+ GM +SGA G D+++ VP T +++ D ++ +L +++ GG Sbjct: 64 QKLSASNGKSGMGLKKSGAAGSDLIIFVPPNTSIYDADSNCMLFELKNFNDEVVVLKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FKSST + P +A PG G + L+L LIAD+G++GLPNAGKS+ ++ +T + Sbjct: 124 GGLGNVNFKSSTKRTPRFAQPGESGLTLNLRLELSLIADVGLVGLPNAGKSSLISKITAS 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 + K+A+YPFTT P+ G+V+ Y + I+AD+PGII+ A +G G+G FL+H +T +L+ Sbjct: 184 RSKVANYPFTTKIPHFGVVRVSYNDLIIADLPGIIEGASKGIGLGFEFLRHISKTQILVF 243 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 ++ + +AY +++EL Y+ L KK I+ S++D Sbjct: 244 LIDVSSNDFMSAYDILINELRVYDIGLLKKKRIIVASKLD 283 >gi|219685591|ref|ZP_03540407.1| GTP-binding protein Obg/CgtA [Borrelia garinii Far04] gi|219672869|gb|EED29892.1| GTP-binding protein Obg/CgtA [Borrelia garinii Far04] Length = 328 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 119/285 (41%), Positives = 180/285 (63%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + SG+GG+G +SF REKF GGPDGG+GG GG V + NL TL ++ Sbjct: 4 FKDSVSITVISGNGGSGCVSFLREKFNAKGGPDGGNGGSGGSVIFKVKENLRTLSSYKNG 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 A++G GM RSGA G+D++L VP T ++ E+ +L+C L++ ++ GG Sbjct: 64 HVLCAKNGRPGMGFKRSGANGKDLILFVPPNTDIYNENDETLLCRLEKLNDEFVILKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FK+S +AP +A PG G + L+L L+ADIG++GLPN GKS+ L +T A Sbjct: 124 GGLGNWNFKTSIRRAPRFAQPGESGNSLNVRLELSLVADIGLVGLPNVGKSSLLNRITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 K ++A+YPFTT P LG+++ Y + ++ADIPGIIK A G G+G +FLKH +T +L Sbjct: 184 KSRVANYPFTTKIPYLGVLRYSYDDLVIADIPGIIKGASFGVGLGTKFLKHITKTKILAL 243 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 ++ E N +Y +L+EL +Y+ +L K +I+ +++D S+ Sbjct: 244 VIDISEANFLESYNILLNELKSYSYKLFNKKKIIIANKLDLDSSE 288 >gi|327535100|gb|AEA93934.1| obg family GTPase CgtA [Enterococcus faecalis OG1RF] Length = 438 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 210/333 (63%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 4 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVVLVVEEGLRTLMDFRFN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM + G ED+++ VP GT V + + +LI DL + GQ +++A GG Sbjct: 64 RHFKATPGENGMSKGMHGRGSEDLLVKVPPGTTVRDAETGALIGDLIENGQTLVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 124 GGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 RPKIGAYHFTTLVPNLGMVTTSDGRSFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I EL+++N L ++ +I+ +++D ++ + LA+ K +LA Sbjct: 244 HVIDMSGMEGRDPYEDYLAINKELASHNLRLMERPQIIVANKMDMPEAEENLAKFKEQLA 303 Query: 298 TQ-----CGQVP-FEFSSITGHGIPQILECLHD 324 + ++P F S +T GI +L D Sbjct: 304 KERTDEYADELPIFPISGVTRKGIEPLLNATAD 336 >gi|219684470|ref|ZP_03539414.1| GTP-binding protein Obg/CgtA [Borrelia garinii PBr] gi|219672459|gb|EED29512.1| GTP-binding protein Obg/CgtA [Borrelia garinii PBr] Length = 328 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 119/285 (41%), Positives = 180/285 (63%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + SG+GG+G +SF REKF GGPDGG+GG GG V + NL TL ++ Sbjct: 4 FKDSVSITVISGNGGSGCVSFLREKFNAKGGPDGGNGGSGGSVIFKVKENLRTLSSYKNG 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 A++G GM RSGA G+D++L VP T ++ E+ +L+C L++ ++ GG Sbjct: 64 HVLCAKNGRPGMGFKRSGANGKDLILFVPPNTDIYNENDETLLCRLEKLNDEFVILKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FK+S +AP +A PG G + L+L L+ADIG++GLPN GKS+ L +T A Sbjct: 124 GGLGNWNFKTSIRRAPRFAQPGESGNSLNVRLELSLVADIGLVGLPNVGKSSLLNRITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 K ++A+YPFTT P LG+++ Y + ++ADIPGIIK A G G+G +FLKH +T +L Sbjct: 184 KSRVANYPFTTKIPYLGVLRYSYDDLVIADIPGIIKGASFGVGLGTKFLKHITKTKILAL 243 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 ++ E N +Y +L+EL +Y+ +L K +I+ +++D S+ Sbjct: 244 VIDISEANFLESYNILLNELKSYSYKLFNKKKIIIANKLDLDSSE 288 >gi|320547062|ref|ZP_08041360.1| Spo0B-associated GTP-binding protein [Streptococcus equinus ATCC 9812] gi|320448299|gb|EFW89044.1| Spo0B-associated GTP-binding protein [Streptococcus equinus ATCC 9812] Length = 437 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 140/329 (42%), Positives = 206/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AKV +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKVSVKAGRGGDGMVAFRREKYVANGGPWGGDGGKGGSVIFKVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ ++A GG Sbjct: 64 RIFKAKSGEKGMTKGMHGRGAEDLIVRVPEGTTVRDAETGKVITDLVENGQEFVVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERDLQLELKILADVGLVGFPSVGKSTLLSVVTAA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL +YN L ++ +I+ +++D ++ + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPEAEENLKVFKEKLA 303 Query: 298 TQC---GQVP--FEFSSITGHGIPQILEC 321 +VP F SS+ G+ ++E Sbjct: 304 ANYDDFDEVPMIFPISSLAHQGLENLMEA 332 >gi|257055296|ref|YP_003133128.1| GTPase ObgE [Saccharomonospora viridis DSM 43017] gi|256585168|gb|ACU96301.1| GTP-binding protein Obg/CgtA [Saccharomonospora viridis DSM 43017] Length = 493 Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 132/329 (40%), Positives = 199/329 (60%), Gaps = 9/329 (2%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++ +G+GG G S REKF GGPDGG+GG GGDV + ++TL+DF + Sbjct: 4 RFVDRVVIHLAAGNGGNGCASVHREKFKPLGGPDGGNGGHGGDVVLVVDPGVHTLLDFHF 63 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H +A +G++G +R+GA GED+ L VP GT V EDG ++ DL G R + A GG Sbjct: 64 RPHARAGNGKQGQGGHRNGAAGEDLELRVPDGTVVLTEDG-EVLADLVGAGTRFVAAKGG 122 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+E+ + L+L+ +AD+G++G P+AGKS+ ++ ++ Sbjct: 123 RGGLGNAALASRARKAPGFALLGEPGEERNLVLELRSVADVGLLGFPSAGKSSLISVLSA 182 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A QG G+G FL+H ER VL+ Sbjct: 183 AKPKIADYPFTTLVPNLGVVSAGDTVFTMADVPGLIPGASQGRGLGLDFLRHIERCAVLV 242 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNS----ELRKKIEIVGLSQIDTVDSDTLARKK 293 H++ E + + + + +EL+ Y +L + +V L+++D D+ LA Sbjct: 243 HVIDCATYEPERDPISDFDALENELAQYTPVLGGDLDSRPRVVVLNKVDVPDAAELAEMV 302 Query: 294 NELATQCGQVPFEFSSITGHGIPQILECL 322 G FE S+ T G+ ++ L Sbjct: 303 RPDFEARGLRVFEVSTATHAGLRELTYAL 331 >gi|322376493|ref|ZP_08050986.1| Obg family GTPase CgtA [Streptococcus sp. M334] gi|321282300|gb|EFX59307.1| Obg family GTPase CgtA [Streptococcus sp. M334] Length = 436 Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 140/329 (42%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G E++ + VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKADSGEKGMTKGMHGRGAEELRVRVPQGTTVRDAETGKVLTDLIEHGQEFIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HI+ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 244 HIIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLEEFKKKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 304 ENYDEFEELPAIFPISGLTKQGLATLLDA 332 >gi|310779183|ref|YP_003967516.1| GTP-binding protein Obg/CgtA [Ilyobacter polytropus DSM 2926] gi|309748506|gb|ADO83168.1| GTP-binding protein Obg/CgtA [Ilyobacter polytropus DSM 2926] Length = 428 Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 129/284 (45%), Positives = 194/284 (68%), Gaps = 4/284 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + I++GDGG G +FRREK ++FGGPDGG GG GG++ A +N+NTL+DF+Y+ Sbjct: 2 FIDEVVITIKAGDGGDGAATFRREKSVQFGGPDGGDGGNGGNIVFVADNNINTLVDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++GE G K+ G G D+++ VP+GTQV +++ L+ DL+ G+ +L GG Sbjct: 62 RIFKAENGENGAKKRMYGKTGTDLLIRVPIGTQVRDQETGKLLLDLNNNGEERVLIKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK++ +AP A G G E + L+LKL+AD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGQGNVHFKNAIRKAPTMAGKGREGAELEVKLELKLLADVALVGYPSVGKSSFINRVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K K+A Y FTTL P LG+V+ E K F++ADIPG+I+ AH+G G+GD+FL+H ER ++ Sbjct: 182 KSKVASYHFTTLSPKLGVVRLEEGKSFLMADIPGLIEGAHEGVGLGDKFLRHIERCKMIY 241 Query: 242 HIVSA--LEENVQAA-YQCILDELSAYNSELRKKIEIVGLSQID 282 HIV A LE ++ I +EL ++ +L K +IV +++D Sbjct: 242 HIVDAAGLEGRTPIEDFKKINEELQKFSPKLAAKKQIVIANKMD 285 >gi|182624043|ref|ZP_02951831.1| spo0B-associated GTP-binding protein [Clostridium perfringens D str. JGS1721] gi|177910936|gb|EDT73290.1| spo0B-associated GTP-binding protein [Clostridium perfringens D str. JGS1721] Length = 428 Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 133/323 (41%), Positives = 205/323 (63%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK++++SGDGG G +SFRREK++ GGPDGG GG+GGDV + TL+DF+Y+ Sbjct: 2 FIDTAKIFVKSGDGGHGSVSFRREKYVPLGGPDGGDGGKGGDVTFIVDPGMTTLLDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A G+ G G GE++ + VP+GT + + + ++ DL + GG Sbjct: 62 RKFVAGRGQDGQGSKCYGRDGENLTIKVPMGTIIRDVESNKVMADLSHRDDTYTICRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + T QAP +A PG+ G+E+ + L+LKL+AD+G++G PN GKST L+ VT+A Sbjct: 122 GGKGNCKFCTPTRQAPTFAEPGMPGEERWVALELKLLADVGLLGFPNVGKSTLLSVVTKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V G + F++AD+PGII+ A +G G+G FL+H ERT +L+ Sbjct: 182 KPKIANYHFTTLKPNLGVVAVPGIEPFVMADVPGIIEGASEGVGLGLDFLRHIERTRLLI 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H+V S +E + ++ I +EL Y+ +L + +IV ++ D + D + K E+ Sbjct: 242 HVVDISGVEGRDAVEDFKRINEELKNYSVKLWDRPQIVVANKCDMLFDEEIFENFKAEVN 301 Query: 298 TQCGQVPFEFSSITGHGIPQILE 320 F+ S+ T G+ ++++ Sbjct: 302 KMGFDKVFKMSAATSQGVEEVIK 324 >gi|289167841|ref|YP_003446110.1| GTP-binding protein, GTP1/Obg family [Streptococcus mitis B6] gi|288907408|emb|CBJ22245.1| GTP-binding protein, GTP1/Obg family [Streptococcus mitis B6] Length = 436 Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 140/329 (42%), Positives = 207/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD A + +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTANIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GEKGM + G ED+ + VP GT V + + ++ DL + GQ I+A GG Sbjct: 64 RHFKANSGEKGMTKGMHGRGAEDLRVRVPQGTTVRDAETGKVLTDLIEHGQEFIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HI+ SA E + Y I EL +YN L ++ +I+ +++D +S + L K +LA Sbjct: 244 HIIDMSASEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESQENLEEFKKKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S +T G+ +L+ Sbjct: 304 ENYDEFEELPAIFPISGLTKQGLATLLDA 332 >gi|18311109|ref|NP_563043.1| GTPase ObgE [Clostridium perfringens str. 13] gi|110799414|ref|YP_696805.1| GTPase ObgE [Clostridium perfringens ATCC 13124] gi|110803823|ref|YP_699403.1| GTPase ObgE [Clostridium perfringens SM101] gi|168205934|ref|ZP_02631939.1| spo0B-associated GTP-binding protein [Clostridium perfringens E str. JGS1987] gi|168208829|ref|ZP_02634454.1| spo0B-associated GTP-binding protein [Clostridium perfringens B str. ATCC 3626] gi|168215754|ref|ZP_02641379.1| spo0B-associated GTP-binding protein [Clostridium perfringens NCTC 8239] gi|81766686|sp|Q8XIJ2|OBG_CLOPE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|123047216|sp|Q0SR54|OBG_CLOPS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|123344557|sp|Q0TNI5|OBG_CLOP1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|18145792|dbj|BAB81833.1| Spo0B associated GTP-binding protein [Clostridium perfringens str. 13] gi|110674061|gb|ABG83048.1| spo0B-associated GTP-binding protein [Clostridium perfringens ATCC 13124] gi|110684324|gb|ABG87694.1| spo0B-associated GTP-binding protein [Clostridium perfringens SM101] gi|170662586|gb|EDT15269.1| spo0B-associated GTP-binding protein [Clostridium perfringens E str. JGS1987] gi|170713000|gb|EDT25182.1| spo0B-associated GTP-binding protein [Clostridium perfringens B str. ATCC 3626] gi|182382077|gb|EDT79556.1| spo0B-associated GTP-binding protein [Clostridium perfringens NCTC 8239] Length = 428 Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 133/323 (41%), Positives = 205/323 (63%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK++++SGDGG G +SFRREK++ GGPDGG GG+GGDV + TL+DF+Y+ Sbjct: 2 FIDTAKIFVKSGDGGHGSVSFRREKYVPLGGPDGGDGGKGGDVTFVVDPGMTTLLDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A G+ G G GE++ + VP+GT + + + ++ DL + GG Sbjct: 62 RKFVAGRGQDGQGSKCYGRDGENLTIKVPMGTIIRDVETNKVMADLSHRDDTYTICRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + T QAP +A PG+ G+E+ + L+LKL+AD+G++G PN GKST L+ VT+A Sbjct: 122 GGKGNCKFCTPTRQAPTFAEPGMPGEERWVALELKLLADVGLLGFPNVGKSTLLSVVTKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V G + F++AD+PGII+ A +G G+G FL+H ERT +L+ Sbjct: 182 KPKIANYHFTTLKPNLGVVAVPGIEPFVMADVPGIIEGASEGVGLGLDFLRHIERTRLLI 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H+V S +E + ++ I +EL Y+ +L + +IV ++ D + D + K E+ Sbjct: 242 HVVDISGVEGRDAVEDFKRINEELKNYSVKLWDRPQIVVANKCDMLFDEEIFENFKAEVN 301 Query: 298 TQCGQVPFEFSSITGHGIPQILE 320 F+ S+ T G+ ++++ Sbjct: 302 KMGFDKVFKMSAATSQGVEEVIK 324 >gi|227833688|ref|YP_002835395.1| putative GTP-binding protein [Corynebacterium aurimucosum ATCC 700975] gi|227454704|gb|ACP33457.1| putative GTP-binding protein [Corynebacterium aurimucosum ATCC 700975] Length = 517 Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 133/330 (40%), Positives = 208/330 (63%), Gaps = 19/330 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++++GDGG G S REKF GGPDGG+GG GGD+ ++ ++ ++TL+DF Y Sbjct: 12 RFIDRVVLHLQAGDGGHGCASVHREKFKPLGGPDGGNGGHGGDILLEVSTQIHTLMDFHY 71 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H K++ G G R+GA+G+D++L VP GT V+ EDG ++ DL G R + A GG Sbjct: 72 RPHIKSERGGNGAGDWRNGARGKDLILEVPAGTVVYTEDG-EMLADLTVPGTRFVAAEGG 130 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S+ +AP +A G G+ + + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 131 FGGLGNAALASAARKAPGFALQGEPGEARDLILELKSMADVGLVGFPSAGKSSLISVLSA 190 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKI DYPFTTL PNLG+V G++ F +AD+PG+I A +G G+G FL+H ERT VL Sbjct: 191 AKPKIGDYPFTTLQPNLGVVDMGHESFTMADVPGLIPGAAEGKGLGLDFLRHIERTAVLA 250 Query: 242 HIVS---------------ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 H+V ALE + A YQ +L++ + +LR++ ++ L++ D ++ Sbjct: 251 HVVDTASIEPGRDPLSDIEALETEL-AKYQELLEQDTGLG-DLRERPRVIILNKADVPEA 308 Query: 287 DTLAR-KKNELATQCGQVPFEFSSITGHGI 315 + LA K +L + G F S++ G+ Sbjct: 309 EELAEFVKGDLEEKYGWPVFTISAVARKGL 338 >gi|51599032|ref|YP_073220.1| GTPase ObgE [Borrelia garinii PBi] gi|81609746|sp|Q65ZZ3|OBG_BORGA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|51573603|gb|AAU07628.1| GTP-binding protein [Borrelia garinii PBi] Length = 329 Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 120/285 (42%), Positives = 181/285 (63%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + SG+GG+G +SF REKF GGPDGG+GG GG V + NL TL ++ Sbjct: 4 FKDSVSITVISGNGGSGCVSFLREKFNAKGGPDGGNGGSGGSVIFKVKENLRTLSSYKNG 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 A++G GM RSGA G+D++L VP T ++ E+ +L+C L++ ++ GG Sbjct: 64 HVLCAKNGRPGMSFKRSGANGKDLILFVPPNTDIYNENDEALLCRLEKLNDEFVILKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FK+S +AP +A PG G + L+L L+ADIG++G PNAGKS+ L +T A Sbjct: 124 GGLGNWNFKTSIRRAPRFAQPGESGNSLNVRLELFLVADIGLVGPPNAGKSSLLNRITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 K ++A+YPFTT P+LG+++ Y + I+ADIPGIIK A G G+G +FLKH +T +L Sbjct: 184 KSRVANYPFTTKIPHLGVLRYSYDDLIIADIPGIIKGASFGVGLGTKFLKHITKTKILAL 243 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 ++ E N +Y +L+EL +Y+ +L K +I+ +++D S+ Sbjct: 244 VIDISEANFLESYNILLNELKSYSYKLFNKKKIIIANKLDLDSSE 288 >gi|224373421|ref|YP_002607793.1| GTP-binding protein Obg/CgtA [Nautilia profundicola AmH] gi|261277700|sp|B9L605|OBG_NAUPA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|223588340|gb|ACM92076.1| GTP-binding protein Obg/CgtA [Nautilia profundicola AmH] Length = 357 Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 129/290 (44%), Positives = 194/290 (66%), Gaps = 4/290 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ ++SG GG G +SFRREKF+ GGPDGG GG+GGDV ++ N +TL ++ + Sbjct: 2 FVDNIKLKVKSGKGGQGCVSFRREKFVVKGGPDGGDGGKGGDVIVECDKNTHTLSHYKGR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KA++G G R + GA GED++L VP GT + + ++ D+ ++G+R +L GG Sbjct: 62 KLLKAKNGRPGEGRKKHGANGEDLILKVPPGTVIKNAETGEVLLDMKEDGERKVLLEGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+ NQ P YA PG GQE I L+LKLIAD+G++G PNAGKST +++++ A Sbjct: 122 GGLGNWHFRGPRNQTPRYAQPGEEGQELEIVLELKLIADVGLVGFPNAGKSTLISTLSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IA+Y FTTL P LG+V+ + Y+ F++ADIPGII+ AH+G G+G FLKH ERT +L Sbjct: 182 RPEIANYEFTTLTPKLGVVRVDEYRSFVMADIPGIIEGAHEGKGLGIEFLKHIERTSTIL 241 Query: 242 HIVSALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 +++ L YQ + EL Y+ +L + + L++ D+V+ + + Sbjct: 242 YMID-LSSYRDPVYQFKTLQKELKEYSEKLASRDYAIALTKCDSVEVEKI 290 >gi|148240431|ref|YP_001225818.1| GTPase ObgE [Synechococcus sp. WH 7803] gi|261277762|sp|A5GNK6|OBG_SYNPW RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|147848970|emb|CAK24521.1| Predicted GTPase [Synechococcus sp. WH 7803] Length = 329 Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 139/332 (41%), Positives = 209/332 (62%), Gaps = 5/332 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ +R G GG G ++FRREK++ GGP GG GG G DV ++A SNL TL+DF+ Sbjct: 1 MQFIDQARITVRGGRGGDGIVAFRREKYVPAGGPSGGDGGHGADVVLEADSNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F A G +G +GA G+ +V+ VP GT+V L+ DL G+R+ +A G Sbjct: 61 YKRLFAAIDGRRGGPNRCTGASGQPLVIKVPCGTEVRHLTTGILLGDLTNPGERLTVAFG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S+ N+AP G G+E + L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GRGGLGNAHYLSNRNRAPEKCTEGRDGEEWPLQLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ + + ADIPG+I A QGAG+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRRPSGDGTVFADIPGLIAGAAQGAGLGHDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V + ++ + + EL AY L + ++ L++++ +D L Sbjct: 241 LIHLVDSGADDPVGDLRVVEKELEAYGHGLVSRPRLLVLNKLELLDEQGRDDLLERLEAS 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 G P S++ G G L+ L D+++ + G Sbjct: 301 SGHRPLLISAVMGKG----LDALLDQVWQLLG 328 >gi|111115613|ref|YP_710231.1| GTPase ObgE [Borrelia afzelii PKo] gi|216263587|ref|ZP_03435582.1| GTP-binding protein Obg/CgtA [Borrelia afzelii ACA-1] gi|123145629|sp|Q0SM73|OBG_BORAP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|110890887|gb|ABH02055.1| GTP-binding protein [Borrelia afzelii PKo] gi|215980431|gb|EEC21252.1| GTP-binding protein Obg/CgtA [Borrelia afzelii ACA-1] Length = 328 Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 121/280 (43%), Positives = 178/280 (63%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + SG+GG+G +SF REKF GGPDGG+GG GG V + NL TL ++ Sbjct: 4 FKDSVSITVVSGNGGSGCVSFLREKFNAKGGPDGGNGGSGGSVIFKVRENLRTLSFYKNG 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 A++G+ GM RSGA G+D++L VP T ++ E+ +L+C L+ ++ GG Sbjct: 64 HVLCAKNGQPGMGFKRSGANGKDLILFVPPNTDIYNENDGTLLCRLENLNDEFVILKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FK+S +AP +A PG G + L+L L+ADIG++GLPNAGKS+ L +T A Sbjct: 124 GGLGNWNFKTSVRRAPRFAQPGESGNSLNVRLELFLVADIGLVGLPNAGKSSLLNRITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 K ++A+YPFTT P+LGI++ Y + I+ADIPGIIK A G G+G +FLKH +T +L Sbjct: 184 KSRVANYPFTTKIPHLGILRYSYDDLIIADIPGIIKGASFGVGLGTKFLKHISKTKILAL 243 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 ++ E N +Y +L+EL Y+ L K +I+ +++D Sbjct: 244 VIDISEANFLESYNILLNELKTYSYNLFYKKKIIIANKLD 283 >gi|203284675|ref|YP_002222415.1| GTP-binding protein Obg [Borrelia duttonii Ly] gi|261266681|sp|B5RMX3|OBG_BORDL RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|201084118|gb|ACH93709.1| GTP-binding protein Obg [Borrelia duttonii Ly] Length = 327 Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 118/280 (42%), Positives = 180/280 (64%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + SG+GGAG +SF REKF GGPDGG GGRGGDV + SNL TL +R Sbjct: 4 FKDSLNLIVSSGNGGAGCVSFLREKFKAKGGPDGGDGGRGGDVIFKVKSNLKTLSLYRNG 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 Q A +G+ GM +SGA G D+++ VP T +++ D ++ +L +++ GG Sbjct: 64 QKLSASNGKSGMGLKKSGAAGSDLIIFVPPNTSIYDADSNCMLFELKNFDDEVVVLKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FKSST + P +A PG G + L+L LIADIG++GLPNAGKS+ ++ +T + Sbjct: 124 GGLGNVNFKSSTKRTPRFAQPGESGLTLNLRLELSLIADIGLVGLPNAGKSSLISKITAS 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 + ++A+YPFTT P+ G+V+ Y + I+AD+PGII+ A +G G+G FL+H +T +L+ Sbjct: 184 RSRVANYPFTTKIPHFGVVRVSYNDLIIADLPGIIEGASKGIGLGFEFLRHISKTQILVF 243 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 ++ ++ +AY +++EL Y+ L KK I+ S++D Sbjct: 244 LIDVSSDDFMSAYDILINELRVYDIGLLKKKRIIVASKLD 283 >gi|168212836|ref|ZP_02638461.1| spo0B-associated GTP-binding protein [Clostridium perfringens CPE str. F4969] gi|170715602|gb|EDT27784.1| spo0B-associated GTP-binding protein [Clostridium perfringens CPE str. F4969] Length = 428 Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 133/323 (41%), Positives = 205/323 (63%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AK++++SGDGG G +SFRREK++ GGPDGG GG+GGDV + TL+DF+Y+ Sbjct: 2 FIDTAKIFVKSGDGGHGSVSFRREKYVPLGGPDGGDGGKGGDVTFVVDPGMTTLLDFKYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A G+ G G GE++ + VP+GT + + + ++ DL + GG Sbjct: 62 RKFVAGRGQDGQGSKCYGRDGENLTIKVPMGTIIRDVETNKVMADLSHRDDTYTICRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + T QAP +A PG+ G+E+ + L+LKL+AD+G++G PN GKST L+ VT+A Sbjct: 122 GGKGNCKFCTPTRQAPTFAEPGMPGEERWVALELKLLADVGLLGFPNVGKSTLLSVVTKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL PNLG+V G + F++AD+PGII+ A +G G+G FL+H ERT +L+ Sbjct: 182 KPKIANYHFTTLKPNLGVVAVPGIEAFVMADVPGIIEGASEGVGLGLDFLRHIERTRLLI 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 H+V S +E + ++ I +EL Y+ +L + +IV ++ D + D + K E+ Sbjct: 242 HVVDISGVEGRDAVEDFKRINEELKNYSVKLWDRPQIVVANKCDMLFDEEIFENFKAEVN 301 Query: 298 TQCGQVPFEFSSITGHGIPQILE 320 F+ S+ T G+ ++++ Sbjct: 302 KMGFDKVFKMSAATSQGVEEVIK 324 >gi|149178363|ref|ZP_01856954.1| GTP-binding protein OBG [Planctomyces maris DSM 8797] gi|148842781|gb|EDL57153.1| GTP-binding protein OBG [Planctomyces maris DSM 8797] Length = 333 Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 133/334 (39%), Positives = 215/334 (64%), Gaps = 7/334 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +Y ++GDGG G SFRRE + GGP+GG GG+GGDV + A N+++L + Sbjct: 2 FVDRVDIYCKAGDGGDGCASFRREAHVPRGGPNGGDGGKGGDVIVLADENVSSLGNIIGH 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+ A+ G G ++G GED ++ VP GT V + +L+ D+ Q G R+++A GG Sbjct: 62 KHWNAERGGHGSSSLKTGKCGEDAIIMVPPGTLVIDSKRGNLLRDMKQSGDRVVVAKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF ++T+Q P G +G+ + I L+LKLIAD+G++G PNAGKST L+ +++A Sbjct: 122 GGRGNRHFATATHQTPREFEKGGVGELRDISLELKLIADVGLVGKPNAGKSTLLSRLSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 P+IA YPFTT YPNLG+V+ G+ +F++ADIPG+I+ AH G G+G FL+H ERT VL+ Sbjct: 182 HPEIAAYPFTTKYPNLGLVRVGFDHQFVMADIPGLIEGAHAGVGLGHEFLRHVERTRVLV 241 Query: 242 HIV--SALEE-NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V S +++ + Y+ I +E+ Y++ L + EI+ +++ + D++ +A L Sbjct: 242 HLVEPSPMDQTDPIQNYRQIREEMRLYDASLMDRPEIIVVTKSELPDAEPVAEL---LGE 298 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + G+ + SS TG + +++ + D++ + E Sbjct: 299 ELGRPVMQISSATGSNLDKLVRMIIDELEELEVE 332 >gi|261266708|sp|A8Z6G0|OBG_CAMC1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|158604924|gb|ABW74744.1| GTP-binding protein Obg/CgtA [Campylobacter concisus 13826] Length = 352 Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 126/286 (44%), Positives = 191/286 (66%), Gaps = 2/286 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ + SG GGAG +SFRREK + GGPDGG GG GGDV+ +N +TL +++ + Sbjct: 2 FIDSVKLTLSSGHGGAGAVSFRREKHVILGGPDGGDGGDGGDVYFVCDNNTHTLANYKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +A GE GM R +G KGE + L VP GT V++ L+CD+ +EGQR + GG Sbjct: 62 RAMRASDGEAGMGRRMTGKKGESLELIVPPGTAVYDAQTNELLCDMVEEGQRTLFLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+S NQAP YA G+ + + L+LKLIAD+G++G PN GKST +++V+ A Sbjct: 122 GGLGNFHFKNSINQAPEYAQNGMPEESIEVRLELKLIADVGLVGFPNVGKSTLISAVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+V+ + + F++ADIPGII+ A G G+G +FLKH ER +LL Sbjct: 182 KPQIANYEFTTLTPKLGLVEVDQFSGFVMADIPGIIEGASDGRGLGVQFLKHIERNKILL 241 Query: 242 HIV-SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 ++ SA ++ + + +E++ ++S L + + ++++D ++ Sbjct: 242 FMIDSANYRSMSEQFSVLKEEVAKFSSVLASRDYAIAITRVDAAEN 287 >gi|330723380|gb|AEC45750.1| GTPase CgtA [Mycoplasma hyorhinis MCLD] Length = 418 Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 130/284 (45%), Positives = 184/284 (64%), Gaps = 5/284 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D+ K+ I +G GG G ISFRRE ++ GGPDGG GG GG ++ S LNTL+ Sbjct: 1 MKFIDQVKIKIAAGKGGDGVISFRREAHVDRGGPDGGDGGDGGSIFFVGDSGLNTLLSLH 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q K GE G +NR GAKGED+ + VP+GT VF++ LICD+ +E + ++A G Sbjct: 61 NEQIIKGNDGENGKSKNRYGAKGEDIFVKVPLGTLVFDDK--KLICDVVEE-KPYLVAKG 117 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN FKSS N+AP + G LGQ + L LK++AD+G +G P+AGKST L +++ Sbjct: 118 GRGGRGNTKFKSSKNKAPRISENGDLGQSFNLTLNLKVLADVGFVGKPSAGKSTVLEAIS 177 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADY FTTL P LG+VK K F+ AD+PG+I A G G+G FLKH ER + Sbjct: 178 NAKPKIADYEFTTLVPQLGLVKYYDKSFVAADLPGLIAGASLGKGLGFVFLKHIERCKAI 237 Query: 241 LHIVS--ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 HI+ + ++N + ++ I +EL +N +L+ +++ ++ D Sbjct: 238 AHIIDFGSEDKNPISDFELINNELFKFNEKLKNVQQVIVANKND 281 >gi|262184694|ref|ZP_06044115.1| GTPase ObgE [Corynebacterium aurimucosum ATCC 700975] Length = 508 Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 133/330 (40%), Positives = 208/330 (63%), Gaps = 19/330 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++++GDGG G S REKF GGPDGG+GG GGD+ ++ ++ ++TL+DF Y Sbjct: 3 RFIDRVVLHLQAGDGGHGCASVHREKFKPLGGPDGGNGGHGGDILLEVSTQIHTLMDFHY 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H K++ G G R+GA+G+D++L VP GT V+ EDG ++ DL G R + A GG Sbjct: 63 RPHIKSERGGNGAGDWRNGARGKDLILEVPAGTVVYTEDG-EMLADLTVPGTRFVAAEGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S+ +AP +A G G+ + + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 FGGLGNAALASAARKAPGFALQGEPGEARDLILELKSMADVGLVGFPSAGKSSLISVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKI DYPFTTL PNLG+V G++ F +AD+PG+I A +G G+G FL+H ERT VL Sbjct: 182 AKPKIGDYPFTTLQPNLGVVDMGHESFTMADVPGLIPGAAEGKGLGLDFLRHIERTAVLA 241 Query: 242 HIVS---------------ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 H+V ALE + A YQ +L++ + +LR++ ++ L++ D ++ Sbjct: 242 HVVDTASIEPGRDPLSDIEALETEL-AKYQELLEQDTGLG-DLRERPRVIILNKADVPEA 299 Query: 287 DTLAR-KKNELATQCGQVPFEFSSITGHGI 315 + LA K +L + G F S++ G+ Sbjct: 300 EELAEFVKGDLEEKYGWPVFTISAVARKGL 329 >gi|256832874|ref|YP_003161601.1| GTP-binding protein Obg/CgtA [Jonesia denitrificans DSM 20603] gi|256686405|gb|ACV09298.1| GTP-binding protein Obg/CgtA [Jonesia denitrificans DSM 20603] Length = 509 Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 130/325 (40%), Positives = 191/325 (58%), Gaps = 14/325 (4%) Query: 22 SFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGA 81 S RREKF GPDGG+GG GG V ++ N+ TL+D+ + H KA G GM R GA Sbjct: 23 SIRREKFKPLAGPDGGNGGNGGSVILRVDPNITTLLDYHHSPHRKAPSGTFGMGDMRHGA 82 Query: 82 KGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYA 141 GED++L VP GT V + DG ++I DL EG +I+A GG GG GNA S +AP +A Sbjct: 83 NGEDLILGVPDGTVVKDRDG-AIIADLVGEGTELIIAEGGRGGLGNAALASKRRKAPGFA 141 Query: 142 NPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV 201 G G E + L++K IAD+ ++G P+AGKS+ +A+++ A+PKIADYPFTTL PNLG+V Sbjct: 142 LLGEPGDEVTVRLEVKSIADVALVGFPSAGKSSLIAAMSAARPKIADYPFTTLVPNLGVV 201 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SALE--ENVQAAYQC 257 + G + +AD+PG+I A +G G+G FL+H ER V++H++ + LE + + Sbjct: 202 QAGESRYTIADVPGLIPGASEGKGLGLEFLRHIERCAVIVHVLDCATLEPGRDPVTDLEV 261 Query: 258 ILDELSAYNSE---------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFS 308 I EL AY+ E L ++ ++V L+++D D LA + G F S Sbjct: 262 IEQELRAYSDELDLDGARTPLHERPQLVVLNKVDIPDGADLADLVEPAIKERGLRTFRVS 321 Query: 309 SITGHGIPQILECLHDKIFSIRGEN 333 +++ HG+ ++ L + R N Sbjct: 322 AVSHHGLKELSFALAKYVEYARRTN 346 >gi|315172343|gb|EFU16360.1| Obg family GTPase CgtA [Enterococcus faecalis TX1346] Length = 436 Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 209/333 (62%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 2 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVVLVVEEGLRTLMDFRFN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM + G ED+++ VP GT V + + +LI DL + GQ +++A GG Sbjct: 62 RHFKATPGENGMSKGMHGRGSEDLLVKVPPGTTVRDAETGALIGDLIENGQTLVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 122 GGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 RPKIGAYHFTTLVPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I EL+++N L ++ +I+ +++D ++ + LA+ K +LA Sbjct: 242 HVIDMSGMEGRDPYEDYLAINKELASHNLRLMERPQIIVANKMDMPEAEENLAKFKEQLA 301 Query: 298 TQ-----CGQVP-FEFSSITGHGIPQILECLHD 324 + ++P F S +T GI +L D Sbjct: 302 KERTDEYADELPIFSISGVTRKGIEPLLNATAD 334 >gi|77409413|ref|ZP_00786110.1| GTP-binding protein, GTP1/Obg family [Streptococcus agalactiae COH1] gi|77171971|gb|EAO75143.1| GTP-binding protein, GTP1/Obg family [Streptococcus agalactiae COH1] Length = 437 Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 137/329 (41%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVKAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVNEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++FKA+ GEKGM + G ED+++++P GT V + + +I DL + Q ++A GG Sbjct: 64 RNFKAKAGEKGMTKGMHGRGAEDLIVSLPPGTTVRDANTGKVITDLVEHDQEFVVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERELQLELKILADVGLVGFPSVGKSTLLSVVSAA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D DS + LA K +LA Sbjct: 244 HVIDMSASEGRDPYDDYISINNELETYNLRLMERPQIIVANKMDMPDSEENLAAFKEKLA 303 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILEC 321 + +P F SS+ G+ +++ Sbjct: 304 ANYDEFDDMPMIFPISSLAHQGLENLMDA 332 >gi|254382742|ref|ZP_04998099.1| GTP-binding protein [Streptomyces sp. Mg1] gi|194341644|gb|EDX22610.1| GTP-binding protein [Streptomyces sp. Mg1] Length = 481 Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 135/332 (40%), Positives = 199/332 (59%), Gaps = 5/332 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G+GG G S REKF GGPDGG+GGRGGDV + + TL+D+ + Sbjct: 4 FVDRVELHVAAGNGGHGCASVHREKFKPLGGPDGGNGGRGGDVILVVEQAITTLLDYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG G+D+VL VP GT V +++G +++ DL +G + A GG Sbjct: 64 PHRKATNGKPGEGGNRSGKDGQDMVLPVPDGTVVLDKEG-NVLADLVGQGTTYVAAEGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G+ G I L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALSSARRKAPGFALLGVPGTTGDIVLELKTVADVALVGFPSAGKSSLISVLSSA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGSTVYTIADVPGLIPGASQGKGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + LE + A I +EL Y L K+ +V L+++D D LA Sbjct: 243 VLDTATLESDRDPIADLDVIEEELKLYGGGLEKRPRLVVLNKVDIPDGQELADMVRPDLE 302 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G FE S++ G+ ++ L + I R Sbjct: 303 ARGYKVFEVSAVARTGLKELSYFLAEGIAKAR 334 >gi|77405203|ref|ZP_00782301.1| GTP-binding protein, GTP1/Obg family [Streptococcus agalactiae H36B] gi|77176205|gb|EAO78976.1| GTP-binding protein, GTP1/Obg family [Streptococcus agalactiae H36B] Length = 437 Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 137/329 (41%), Positives = 207/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVKAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVNEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++FKA+ GEKGM + G ED+++++P GT V + +I DL + Q ++A GG Sbjct: 64 RNFKAKAGEKGMTKGMHGRGAEDLIVSLPPGTTVRDATTGKVITDLVEHDQEFVVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAEKGEPGEERELQLELKILADVGLVGFPSVGKSTLLSVVSAA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D DS + LA K +LA Sbjct: 244 HVIDMSASEGRDPYDDYVSINNELETYNLRLMERPQIIVANKMDMPDSEENLAAFKEKLA 303 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILEC 321 + +P F SS+ G+ +++ Sbjct: 304 ANYDEFDDMPMIFPISSLAHQGLENLMDA 332 >gi|256847025|ref|ZP_05552471.1| obg family GTPase CgtA [Lactobacillus coleohominis 101-4-CHN] gi|256715689|gb|EEU30664.1| obg family GTPase CgtA [Lactobacillus coleohominis 101-4-CHN] Length = 437 Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 137/327 (41%), Positives = 210/327 (64%), Gaps = 9/327 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +G GG G ++FRREK++ GGP GG GGRGG + ++ L TL+DFRY Sbjct: 4 FVDQVKIEAHAGKGGNGMVAFRREKYVPNGGPAGGDGGRGGSIILKVDEGLRTLMDFRYH 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FK+++G GM + +GA +D V+ VP GT V + D ++ DL + G +++A GG Sbjct: 64 RIFKSKNGGNGMSKQMTGADAKDTVIPVPQGTTVRDLDTGEIVGDLVKNGDELVIAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S+ N AP A G G++ + L+LK++AD+G+IG P+ GKST L+ VT A Sbjct: 124 GGRGNMRFASAKNPAPEIAENGEPGEDHYLELELKMLADVGLIGYPSVGKSTLLSVVTGA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPK+A Y FTTL PNLG+V ++F +AD+PG+I+ A +G G+G +FL+H ERT VLL Sbjct: 184 KPKVAAYEFTTLVPNLGMVMLPDGRDFAMADMPGLIEGASKGVGLGLQFLRHIERTRVLL 243 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H+V E+ + A ++ I EL++Y+ EL K+ +++ +++D +S D L + K LA Sbjct: 244 HLVDMGSEDPEQAMERFRSINHELASYDPELLKRPQLIVATKMDLPNSADNLEKFKKMLA 303 Query: 298 TQ--CGQVP--FEFSSITGHGIPQILE 320 +VP F S++T GI +++ Sbjct: 304 KDQTLPEVPEVFPISAVTHAGIDDLMK 330 >gi|169350139|ref|ZP_02867077.1| hypothetical protein CLOSPI_00881 [Clostridium spiroforme DSM 1552] gi|169292922|gb|EDS75055.1| hypothetical protein CLOSPI_00881 [Clostridium spiroforme DSM 1552] Length = 428 Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 132/332 (39%), Positives = 211/332 (63%), Gaps = 9/332 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+AK+ + +G GG G ++FRRE + GGP GG GG+GG V +AT++L+TL+D + Sbjct: 1 MQFIDKAKIRVEAGKGGDGTVAFRREAHVPKGGPAGGDGGKGGSVIFEATTSLSTLLDLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +KA G+ GM + G D ++ VPVGT + E+ ++ DL ++ QR+++A G Sbjct: 61 YNRLYKAPSGQNGMAKKMHGKDAIDTLIKVPVGTVIINEETNKVMADLTEDKQRVVIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F +S N AP G G++ + +LKL+AD+G++G P+ GKST L+ V+ Sbjct: 121 GRGGRGNARFATSRNPAPQICERGEPGEKFDLQCELKLLADVGLVGFPSVGKSTLLSVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGI--VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 RA+P+IADY FTT+ PNLG+ VK+G + F++AD+PG+I+ A QG G+G +FL+H ER Sbjct: 181 RARPEIADYHFTTIVPNLGVVQVKDG-RSFVMADLPGLIEGAAQGRGLGHQFLRHIERCR 239 Query: 239 VLLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKN 294 V++HI+ + + Y+ I EL Y L ++ +IV +++D + + LAR K Sbjct: 240 VIVHIIDMGAVDGRDPYEDYVTINKELGEYQYRLLERPQIVVANKMDEEGAKENLARFKE 299 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ + P S+I G+ Q+L + D + Sbjct: 300 QVGDEVKVFP--ISAIIHDGVDQVLYAIADTL 329 >gi|256619032|ref|ZP_05475878.1| GTPase ObgE [Enterococcus faecalis ATCC 4200] gi|256598559|gb|EEU17735.1| GTPase ObgE [Enterococcus faecalis ATCC 4200] Length = 436 Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 209/333 (62%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 2 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVVLVVEEGLRTLMDFRFN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM + G ED+++ VP GT V + + +LI DL + GQ +++A GG Sbjct: 62 RHFKATPGENGMSKGMHGRGSEDLLVKVPPGTTVRDAETGALIGDLIENGQTLVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 122 GGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 RPKIGAYHFTTLVPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I EL+++N L ++ +I+ +++D ++ + LA+ K +LA Sbjct: 242 HVIDMSGMEGRDPYEDYLAINKELASHNLRLMERPQIIVANKMDMPEAEENLAKFKEQLA 301 Query: 298 TQ-----CGQVP-FEFSSITGHGIPQILECLHD 324 + ++P F S +T GI +L D Sbjct: 302 KERTDEYADELPIFPISGVTRKGIEPLLNATAD 334 >gi|330832695|ref|YP_004401520.1| GTP-binding protein Obg/CgtA [Streptococcus suis ST3] gi|329306918|gb|AEB81334.1| GTP-binding protein Obg/CgtA [Streptococcus suis ST3] Length = 437 Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 204/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG GG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGKGGDGMVAFRREKYVPNGGPWGGDGGHGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA GEKGM + G ED+++ VP GT V + D +I DL + GQ ++A GG Sbjct: 64 RRFKADDGEKGMTKGMHGRGAEDLIVRVPQGTTVRDADTGKIITDLVENGQEFVIAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G G+E+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGEERNLELELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 H+ +SA E + Y I +EL YN L ++ +I+ +++D + ++ L K +LA Sbjct: 244 HVLDMSASEGRDPYEDYVAINNELETYNLRLMERPQIIVANKMDMPEAAENLEEFKKKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S I G+ +LE Sbjct: 304 ANYDEFEELPQIFPISGIAHQGLKNLLEA 332 >gi|269926942|ref|YP_003323565.1| GTP-binding protein Obg/CgtA [Thermobaculum terrenum ATCC BAA-798] gi|269790602|gb|ACZ42743.1| GTP-binding protein Obg/CgtA [Thermobaculum terrenum ATCC BAA-798] Length = 435 Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 125/285 (43%), Positives = 192/285 (67%), Gaps = 5/285 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 +D+ + +++GDGG G S RREKF+ GGPDGG GGRGG V++ A + NTL+ + ++ Sbjct: 1 MVDQVVIEVKAGDGGNGSASLRREKFVPKGGPDGGDGGRGGSVYLVADPSENTLLPYTFK 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ G G + R G G D+ L VPVGT V++++ L+ DL GQ++++A GG Sbjct: 61 KRYVAESGGHGRSQKRHGKAGADLFLPVPVGTVVYDDETGELLADLSTPGQKVLVARGGR 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF +ST Q P +A G G+E+ + L+LKL+AD+ ++GLPNAGKST L++++ A Sbjct: 121 GGLGNTHFATSTYQTPRFAEKGEPGEERRLRLELKLLADVSLVGLPNAGKSTLLSAISSA 180 Query: 183 KPKIADYPFTTLYPNLGIVKE--GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +PKI +YPFTTL P LG+V+ K F++ADIPG+++ AH+G G+GD FL+H ERT VL Sbjct: 181 RPKIGNYPFTTLEPVLGVVQVPGSEKSFVVADIPGLVEGAHEGTGLGDEFLRHIERTRVL 240 Query: 241 LHIVSALEE---NVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 L +V + + A + + +EL Y+ +L ++ +V ++ID Sbjct: 241 LFVVDGSSQDGVDPLDAIRILREELRYYDPKLLERPSLVAFNKID 285 >gi|223932470|ref|ZP_03624472.1| GTP-binding protein Obg/CgtA [Streptococcus suis 89/1591] gi|223898924|gb|EEF65283.1| GTP-binding protein Obg/CgtA [Streptococcus suis 89/1591] Length = 437 Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 204/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG GG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGKGGDGMVAFRREKYVPNGGPWGGDGGYGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA GEKGM + G ED+++ VP GT V + D +I DL + GQ ++A GG Sbjct: 64 RRFKADDGEKGMTKGMHGRGAEDLIVRVPQGTTVRDADTGKIITDLVENGQEFVIAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G G+E+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPKNPAPEISENGEPGEERNLELELKVLADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 H+ +SA E + Y I +EL YN L ++ +I+ +++D + ++ L K +LA Sbjct: 244 HVLDMSASEGRDPYEDYVAINNELETYNLRLMERPQIIVANKMDMPEAAENLEEFKKKLA 303 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S I G+ +LE Sbjct: 304 ANYDEFEELPQIFPISGIAHQGLKNLLEA 332 >gi|302338319|ref|YP_003803525.1| GTP-binding protein Obg/CgtA [Spirochaeta smaragdinae DSM 11293] gi|301635504|gb|ADK80931.1| GTP-binding protein Obg/CgtA [Spirochaeta smaragdinae DSM 11293] Length = 334 Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 124/286 (43%), Positives = 178/286 (62%), Gaps = 2/286 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F DE + + SG GG G ISFRREK++ GGPDGG GG GG+V NL TL + + Sbjct: 4 FADETYIDVASGSGGNGAISFRREKYVPKGGPDGGDGGNGGNVVFLVRKNLRTLAHLKKE 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQ--EGQRIILAPG 120 +HF+A+ G+ G + R G G D V+ VP GT + + +I DL + EG+ I G Sbjct: 64 RHFRAEAGQAGSGQRRHGRNGADAVIPVPPGTILRDPQSEEIIKDLAELEEGESWIFLSG 123 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKS+ Q P +A G G + + ++L+LIADIG +G PNAGKS+ L + T Sbjct: 124 GRGGKGNTHFKSARRQIPRFAQDGEEGSQARVHVELRLIADIGFVGFPNAGKSSLLKAAT 183 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKP++A Y FTT PNLG++ GY+E ILADIPG+I+ A QGAG+G FL+H RT L Sbjct: 184 NAKPEVASYEFTTKIPNLGMMNIGYRELILADIPGLIRGASQGAGLGHTFLRHISRTTGL 243 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 ++ ++ A+ +L EL++Y+ L +K ++ +++D ++ Sbjct: 244 AFLIDLSDDRYAEAFPVLLKELASYDPVLAEKPRLIVATKLDLPET 289 >gi|229545856|ref|ZP_04434581.1| GTP-binding protein [Enterococcus faecalis TX1322] gi|229550048|ref|ZP_04438773.1| GTP-binding protein [Enterococcus faecalis ATCC 29200] gi|256853093|ref|ZP_05558463.1| GTP-binding protein [Enterococcus faecalis T8] gi|294779888|ref|ZP_06745271.1| Obg family GTPase CgtA [Enterococcus faecalis PC1.1] gi|300860479|ref|ZP_07106566.1| Obg family GTPase CgtA [Enterococcus faecalis TUSoD Ef11] gi|81838922|sp|Q834V4|OBG_ENTFA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|29343554|gb|AAO81316.1| GTP-binding protein [Enterococcus faecalis V583] gi|229304827|gb|EEN70823.1| GTP-binding protein [Enterococcus faecalis ATCC 29200] gi|229309011|gb|EEN74998.1| GTP-binding protein [Enterococcus faecalis TX1322] gi|256711552|gb|EEU26590.1| GTP-binding protein [Enterococcus faecalis T8] gi|294453038|gb|EFG21457.1| Obg family GTPase CgtA [Enterococcus faecalis PC1.1] gi|300849518|gb|EFK77268.1| Obg family GTPase CgtA [Enterococcus faecalis TUSoD Ef11] Length = 438 Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 209/333 (62%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 4 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVVLVVEEGLRTLMDFRFN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM + G ED+++ VP GT V + + +LI DL + GQ +++A GG Sbjct: 64 RHFKATPGENGMSKGMHGRGSEDLLVKVPPGTTVRDAETGALIGDLIENGQTLVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 124 GGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 RPKIGAYHFTTLVPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I EL+++N L ++ +I+ +++D ++ + LA+ K +LA Sbjct: 244 HVIDMSGMEGRDPYEDYLAINKELASHNLRLMERPQIIVANKMDMPEAEENLAKFKEQLA 303 Query: 298 TQ-----CGQVP-FEFSSITGHGIPQILECLHD 324 + ++P F S +T GI +L D Sbjct: 304 KERTDEYADELPIFPISGVTRKGIEPLLNATAD 336 >gi|161511185|ref|NP_815246.2| GTPase ObgE [Enterococcus faecalis V583] gi|227518719|ref|ZP_03948768.1| GTP-binding protein [Enterococcus faecalis TX0104] gi|227553328|ref|ZP_03983377.1| GTP-binding protein [Enterococcus faecalis HH22] gi|255972828|ref|ZP_05423414.1| GTPase ObgE [Enterococcus faecalis T1] gi|255975884|ref|ZP_05426470.1| GTPase ObgE [Enterococcus faecalis T2] gi|256762458|ref|ZP_05503038.1| GTPase ObgE [Enterococcus faecalis T3] gi|256958949|ref|ZP_05563120.1| GTPase ObgE [Enterococcus faecalis DS5] gi|256961958|ref|ZP_05566129.1| GTPase ObgE [Enterococcus faecalis Merz96] gi|256965156|ref|ZP_05569327.1| GTPase ObgE [Enterococcus faecalis HIP11704] gi|257078980|ref|ZP_05573341.1| GTPase ObgE [Enterococcus faecalis JH1] gi|257082582|ref|ZP_05576943.1| GTPase ObgE [Enterococcus faecalis E1Sol] gi|257085215|ref|ZP_05579576.1| GTPase ObgE [Enterococcus faecalis Fly1] gi|257086776|ref|ZP_05581137.1| GTPase ObgE [Enterococcus faecalis D6] gi|257416062|ref|ZP_05593056.1| GTPase ObgE [Enterococcus faecalis AR01/DG] gi|257419265|ref|ZP_05596259.1| GTPase obgE [Enterococcus faecalis T11] gi|257422651|ref|ZP_05599641.1| GTP-binding protein [Enterococcus faecalis X98] gi|293383027|ref|ZP_06628945.1| Obg family GTPase CgtA [Enterococcus faecalis R712] gi|293389484|ref|ZP_06633941.1| Obg family GTPase CgtA [Enterococcus faecalis S613] gi|307271050|ref|ZP_07552333.1| Obg family GTPase CgtA [Enterococcus faecalis TX4248] gi|307273257|ref|ZP_07554503.1| Obg family GTPase CgtA [Enterococcus faecalis TX0855] gi|307278106|ref|ZP_07559190.1| Obg family GTPase CgtA [Enterococcus faecalis TX0860] gi|307289073|ref|ZP_07569029.1| Obg family GTPase CgtA [Enterococcus faecalis TX0109] gi|312900728|ref|ZP_07760025.1| Obg family GTPase CgtA [Enterococcus faecalis TX0470] gi|312907502|ref|ZP_07766493.1| Obg family GTPase CgtA [Enterococcus faecalis DAPTO 512] gi|312910120|ref|ZP_07768967.1| Obg family GTPase CgtA [Enterococcus faecalis DAPTO 516] gi|312951461|ref|ZP_07770357.1| Obg family GTPase CgtA [Enterococcus faecalis TX0102] gi|227073827|gb|EEI11790.1| GTP-binding protein [Enterococcus faecalis TX0104] gi|227177534|gb|EEI58506.1| GTP-binding protein [Enterococcus faecalis HH22] gi|255963846|gb|EET96322.1| GTPase ObgE [Enterococcus faecalis T1] gi|255968756|gb|EET99378.1| GTPase ObgE [Enterococcus faecalis T2] gi|256683709|gb|EEU23404.1| GTPase ObgE [Enterococcus faecalis T3] gi|256949445|gb|EEU66077.1| GTPase ObgE [Enterococcus faecalis DS5] gi|256952454|gb|EEU69086.1| GTPase ObgE [Enterococcus faecalis Merz96] gi|256955652|gb|EEU72284.1| GTPase ObgE [Enterococcus faecalis HIP11704] gi|256987010|gb|EEU74312.1| GTPase ObgE [Enterococcus faecalis JH1] gi|256990612|gb|EEU77914.1| GTPase ObgE [Enterococcus faecalis E1Sol] gi|256993245|gb|EEU80547.1| GTPase ObgE [Enterococcus faecalis Fly1] gi|256994806|gb|EEU82108.1| GTPase ObgE [Enterococcus faecalis D6] gi|257157890|gb|EEU87850.1| GTPase ObgE [Enterococcus faecalis ARO1/DG] gi|257161093|gb|EEU91053.1| GTPase obgE [Enterococcus faecalis T11] gi|257164475|gb|EEU94435.1| GTP-binding protein [Enterococcus faecalis X98] gi|291079692|gb|EFE17056.1| Obg family GTPase CgtA [Enterococcus faecalis R712] gi|291081101|gb|EFE18064.1| Obg family GTPase CgtA [Enterococcus faecalis S613] gi|306499782|gb|EFM69143.1| Obg family GTPase CgtA [Enterococcus faecalis TX0109] gi|306505503|gb|EFM74689.1| Obg family GTPase CgtA [Enterococcus faecalis TX0860] gi|306510242|gb|EFM79266.1| Obg family GTPase CgtA [Enterococcus faecalis TX0855] gi|306512548|gb|EFM81197.1| Obg family GTPase CgtA [Enterococcus faecalis TX4248] gi|310626530|gb|EFQ09813.1| Obg family GTPase CgtA [Enterococcus faecalis DAPTO 512] gi|310630427|gb|EFQ13710.1| Obg family GTPase CgtA [Enterococcus faecalis TX0102] gi|311289393|gb|EFQ67949.1| Obg family GTPase CgtA [Enterococcus faecalis DAPTO 516] gi|311292209|gb|EFQ70765.1| Obg family GTPase CgtA [Enterococcus faecalis TX0470] gi|315027298|gb|EFT39230.1| Obg family GTPase CgtA [Enterococcus faecalis TX2137] gi|315029417|gb|EFT41349.1| Obg family GTPase CgtA [Enterococcus faecalis TX4000] gi|315033937|gb|EFT45869.1| Obg family GTPase CgtA [Enterococcus faecalis TX0017] gi|315036946|gb|EFT48878.1| Obg family GTPase CgtA [Enterococcus faecalis TX0027] gi|315150569|gb|EFT94585.1| Obg family GTPase CgtA [Enterococcus faecalis TX0012] gi|315152516|gb|EFT96532.1| Obg family GTPase CgtA [Enterococcus faecalis TX0031] gi|315155794|gb|EFT99810.1| Obg family GTPase CgtA [Enterococcus faecalis TX0043] gi|315158039|gb|EFU02056.1| Obg family GTPase CgtA [Enterococcus faecalis TX0312] gi|315160477|gb|EFU04494.1| Obg family GTPase CgtA [Enterococcus faecalis TX0645] gi|315163982|gb|EFU07999.1| Obg family GTPase CgtA [Enterococcus faecalis TX1302] gi|315169068|gb|EFU13085.1| Obg family GTPase CgtA [Enterococcus faecalis TX1341] gi|315169695|gb|EFU13712.1| Obg family GTPase CgtA [Enterococcus faecalis TX1342] gi|315575899|gb|EFU88090.1| Obg family GTPase CgtA [Enterococcus faecalis TX0309B] gi|315580551|gb|EFU92742.1| Obg family GTPase CgtA [Enterococcus faecalis TX0309A] gi|323480692|gb|ADX80131.1| GTP-binding protein Obg/CgtA [Enterococcus faecalis 62] gi|329571341|gb|EGG53028.1| Obg family GTPase CgtA [Enterococcus faecalis TX1467] Length = 436 Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 209/333 (62%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 2 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVVLVVEEGLRTLMDFRFN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM + G ED+++ VP GT V + + +LI DL + GQ +++A GG Sbjct: 62 RHFKATPGENGMSKGMHGRGSEDLLVKVPPGTTVRDAETGALIGDLIENGQTLVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 122 GGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 RPKIGAYHFTTLVPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I EL+++N L ++ +I+ +++D ++ + LA+ K +LA Sbjct: 242 HVIDMSGMEGRDPYEDYLAINKELASHNLRLMERPQIIVANKMDMPEAEENLAKFKEQLA 301 Query: 298 TQ-----CGQVP-FEFSSITGHGIPQILECLHD 324 + ++P F S +T GI +L D Sbjct: 302 KERTDEYADELPIFPISGVTRKGIEPLLNATAD 334 >gi|167755865|ref|ZP_02427992.1| hypothetical protein CLORAM_01382 [Clostridium ramosum DSM 1402] gi|237734833|ref|ZP_04565314.1| GTP-binding protein [Mollicutes bacterium D7] gi|167704804|gb|EDS19383.1| hypothetical protein CLORAM_01382 [Clostridium ramosum DSM 1402] gi|229382161|gb|EEO32252.1| GTP-binding protein [Coprobacillus sp. D7] Length = 433 Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 135/332 (40%), Positives = 208/332 (62%), Gaps = 9/332 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+AK+ + +G GG G ++FRRE + GGP GG GGRGG V QAT++L+TL+D + Sbjct: 7 MQFIDKAKIRVEAGKGGDGTVAFRREAHVPKGGPAGGDGGRGGSVIFQATTSLSTLLDLK 66 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +KA G+ GM + G D V+ VPVGT + E+ ++ DL ++ QR+++A G Sbjct: 67 YNRLYKAPSGQNGMAKKMHGKDAIDTVIKVPVGTMILNEETGQIMADLTEDKQRVVIAKG 126 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F +S N AP G G+ + +LKL+AD+G++G P+ GKST L+ V+ Sbjct: 127 GRGGRGNARFATSRNPAPQICERGEPGENFDLICELKLLADVGLVGFPSVGKSTLLSVVS 186 Query: 181 RAKPKIADYPFTTLYPNLGI--VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 RA+P+IADY FTT+ PNLG+ VK+G + F++AD+PG+I+ A QG G+G +FL+H ER Sbjct: 187 RARPEIADYHFTTIVPNLGVVQVKDG-RSFVMADLPGLIEGAAQGKGLGHQFLRHIERCR 245 Query: 239 VLLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKN 294 V++HIV + + Y+ I EL Y L ++ +IV +++D + + L R K Sbjct: 246 VIVHIVDMGAVDGRDPYEDYVTINKELGEYQYRLLERPQIVVANKMDEEGAEENLVRFKK 305 Query: 295 ELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ P S+I G+ Q+L + D + Sbjct: 306 QVGEDVKIFP--ISAIIHDGVDQVLYAVADAL 335 >gi|291457094|ref|ZP_06596484.1| GTP-binding protein [Bifidobacterium breve DSM 20213] gi|291380929|gb|EFE88447.1| GTP-binding protein [Bifidobacterium breve DSM 20213] Length = 563 Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 134/349 (38%), Positives = 204/349 (58%), Gaps = 21/349 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V++R GDGG G RREK+ GP+GG+GG GG V A N +L+D+R+ Sbjct: 4 FVDRVTVHVRGGDGGNGSAGIRREKYKPLAGPNGGNGGDGGSVVFVADRNATSLLDYRFM 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI--------SLICDLDQEGQR 114 H A +G G+ N+ G+KGED++L VP GT VFE G + DL EG R Sbjct: 64 PHRTAGNGTMGLGDNKDGSKGEDLILPVPCGTVVFEARGEQGKTKHPGEQLADLRHEGDR 123 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 +++A GG GG GN + T +AP +A G LG+E+ + L+LK IAD+ ++G P+AGKS+ Sbjct: 124 VVVAQGGAGGLGNIALANKTRRAPGFALLGELGEERDVILELKSIADVALVGFPSAGKSS 183 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +A+++ AKPKIADYPFTTL PNLG+V G + +AD+PG+I A +G G+G FL+H Sbjct: 184 LIAAMSAAKPKIADYPFTTLVPNLGVVIAGDSRYTIADVPGLIPGASEGKGLGLEFLRHI 243 Query: 235 ERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + + + YQ + +EL+ Y +L ++ IV L++I Sbjct: 244 ERTEIIAHVIDCATLEPDRDPMSDYQALENELALYADKLELPLGAIPIPERPRIVILNKI 303 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 D ++ LA + G FE S+ + G+ ++ L + + +R Sbjct: 304 DVPEAKELAEFVRPEFEKLGLKVFEISTASHEGLKELNFALAELVHEMR 352 >gi|70726278|ref|YP_253192.1| GTPase ObgE [Staphylococcus haemolyticus JCSC1435] gi|123660395|sp|Q4L6Y9|OBG_STAHJ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|68447002|dbj|BAE04586.1| Spo0B-associated GTP-binding protein [Staphylococcus haemolyticus JCSC1435] Length = 430 Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 136/333 (40%), Positives = 207/333 (62%), Gaps = 7/333 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ + +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVTISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVVFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE G N G +D+VL VP GT + + ++ DL ++GQR ++A GG Sbjct: 62 RHFKAKKGENGQSSNMHGRGADDLVLKVPPGTIIKSVETDEVLADLVEDGQRAVVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP ++ G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFATPRNPAPDFSENGEPGEELDVTLELKLLADVGLVGFPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V + F++AD+PG+I+ A G G+G +FL+H ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVSTPDNRSFVMADLPGLIEGASDGVGLGHQFLRHVERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S E + YQ I EL Y L + +IV +++D D+ D L K ++ Sbjct: 242 HMIDMSGSEGRDPFDDYQIINKELVNYKQRLEDRPQIVVANKMDMPDAQDNLTLFKEQVD 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +P S+IT I Q+L + DK+ ++ Sbjct: 302 DSVTIIP--VSTITRDNIEQLLYAIADKLDEVK 332 >gi|288905605|ref|YP_003430827.1| GTP-binding protein, GTP1/Obg family [Streptococcus gallolyticus UCN34] gi|288732331|emb|CBI13901.1| putative GTP-binding protein, GTP1/Obg family [Streptococcus gallolyticus UCN34] Length = 435 Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 206/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 2 FLDTAKISVKAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ ++A GG Sbjct: 62 RIFKAKSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETNKVITDLVENGQEFVVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 122 GGRGNIRFATPRNPAPEIAENGEPGEERDLQLELKILADVGLVGFPSVGKSTLLSVVTAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 242 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAEENLKIFKEKLA 301 Query: 298 TQCG---QVP--FEFSSITGHGIPQILEC 321 ++P F SS+ G+ ++E Sbjct: 302 ANYDDFEEMPMIFPISSLAHQGLENLMEA 330 >gi|161485613|ref|NP_688464.2| GTPase ObgE [Streptococcus agalactiae 2603V/R] gi|161486744|ref|YP_330107.2| GTPase ObgE [Streptococcus agalactiae A909] gi|161486826|ref|NP_735974.2| GTPase ObgE [Streptococcus agalactiae NEM316] Length = 435 Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 137/329 (41%), Positives = 207/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 2 FLDTAKISVKAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVNEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++FKA+ GEKGM + G ED+++++P GT V + +I DL + Q ++A GG Sbjct: 62 RNFKAKAGEKGMTKGMHGRGAEDLIVSLPPGTTVRDATTGKVITDLVEHDQEFVVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPRNPAPEIAENGEPGEERELQLELKILADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D DS + LA K +LA Sbjct: 242 HVIDMSASEGRDPYDDYVSINNELETYNLRLMERPQIIVANKMDMPDSEENLAAFKEKLA 301 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILEC 321 + +P F SS+ G+ +++ Sbjct: 302 ANYDEFDDMPMIFPISSLAHQGLENLMDA 330 >gi|76797632|ref|ZP_00779902.1| GTP-binding protein [Streptococcus agalactiae 18RS21] gi|77411062|ref|ZP_00787416.1| GTP-binding protein, GTP1/Obg family [Streptococcus agalactiae CJB111] gi|77414112|ref|ZP_00790279.1| GTP-binding protein, GTP1/Obg family [Streptococcus agalactiae 515] gi|81845402|sp|Q8DYL0|OBG_STRA5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|81845582|sp|Q8E465|OBG_STRA3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|123601509|sp|Q3K046|OBG_STRA1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|22534498|gb|AAN00337.1|AE014259_8 GTP-binding protein, GTP1/Obg family [Streptococcus agalactiae 2603V/R] gi|24413118|emb|CAD47196.1| Unknown [Streptococcus agalactiae NEM316] gi|76562507|gb|ABA45091.1| GTP-binding protein [Streptococcus agalactiae A909] gi|76586993|gb|EAO63481.1| GTP-binding protein [Streptococcus agalactiae 18RS21] gi|77159823|gb|EAO70967.1| GTP-binding protein, GTP1/Obg family [Streptococcus agalactiae 515] gi|77162885|gb|EAO73842.1| GTP-binding protein, GTP1/Obg family [Streptococcus agalactiae CJB111] Length = 437 Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 137/329 (41%), Positives = 207/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVKAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVNEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++FKA+ GEKGM + G ED+++++P GT V + +I DL + Q ++A GG Sbjct: 64 RNFKAKAGEKGMTKGMHGRGAEDLIVSLPPGTTVRDATTGKVITDLVEHDQEFVVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERELQLELKILADVGLVGFPSVGKSTLLSVVSAA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D DS + LA K +LA Sbjct: 244 HVIDMSASEGRDPYDDYVSINNELETYNLRLMERPQIIVANKMDMPDSEENLAAFKEKLA 303 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILEC 321 + +P F SS+ G+ +++ Sbjct: 304 ANYDEFDDMPMIFPISSLAHQGLENLMDA 332 >gi|306831691|ref|ZP_07464848.1| obg family GTPase CgtA [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978631|ref|YP_004288347.1| GTP-binding protein, GTP1/Obg family [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|304426116|gb|EFM29231.1| obg family GTPase CgtA [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178559|emb|CBZ48603.1| GTP-binding protein, GTP1/Obg family [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 437 Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 206/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVKAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ ++A GG Sbjct: 64 RIFKAKSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETNKVITDLVENGQEFVVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERDLQLELKILADVGLVGFPSVGKSTLLSVVTAA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAEENLKIFKEKLA 303 Query: 298 TQCG---QVP--FEFSSITGHGIPQILEC 321 ++P F SS+ G+ ++E Sbjct: 304 ANYDDFEEMPMIFPISSLAHQGLENLMEA 332 >gi|302023669|ref|ZP_07248880.1| GTPase ObgE [Streptococcus suis 05HAS68] Length = 435 Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 204/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG GG+V L TL+DFRY Sbjct: 2 FLDTAKIKVKAGKGGDGMVAFRREKYVPNGGPWGGDGGHGGNVVFVVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA GEKGM + G ED+++ VP GT V + D +I DL + GQ ++A GG Sbjct: 62 RRFKADDGEKGMTKGMHGRGAEDLIVRVPQGTTVRDADTGKIITDLVENGQEFVIAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G G+E+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 122 GGRGNIRFATPKNPAPEISENGEPGEERNLELELKVLADVGLVGFPSVGKSTLLSVITAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTKSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 H+ +SA E + Y I +EL YN L ++ +I+ +++D + ++ L K +LA Sbjct: 242 HVLDMSASEGRDPYEDYVAINNELETYNLRLMERPQIIVANKMDMPEAAENLEEFKKKLA 301 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S I G+ +LE Sbjct: 302 ANYDEFEELPQIFPISGIAHQGLKNLLEA 330 >gi|325570357|ref|ZP_08146172.1| Spo0B-associated GTP-binding protein [Enterococcus casseliflavus ATCC 12755] gi|325156685|gb|EGC68861.1| Spo0B-associated GTP-binding protein [Enterococcus casseliflavus ATCC 12755] Length = 437 Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 207/333 (62%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 4 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVILVVDEGLRTLMDFRFN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GE GM + G +D + VP GT V + + +L+ DL ++GQ +++A GG Sbjct: 64 RHFKAQPGENGMSKGMHGRGSDDTYIKVPQGTTVRDAETGTLLGDLIEQGQTLVIAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 124 GGRGNIRFASPKNPAPELAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 RPKIGAYHFTTLVPNLGMVTTTDGRSFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I +ELS +N L ++ +I+ +++D D+ + LA K +LA Sbjct: 244 HVIDMSGMEGRDPYEDYLSINNELSTHNLRLLERPQIIVANKMDMPDAEENLALFKEQLA 303 Query: 298 TQCGQ------VPFEFSSITGHGIPQILECLHD 324 + + F S +T GI +L D Sbjct: 304 KEKTDEFADEPMIFPISGVTRKGIDALLNATAD 336 >gi|330836965|ref|YP_004411606.1| GTPase obg [Spirochaeta coccoides DSM 17374] gi|329748868|gb|AEC02224.1| GTPase obg [Spirochaeta coccoides DSM 17374] Length = 364 Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 132/302 (43%), Positives = 187/302 (61%), Gaps = 4/302 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F DE + + SG+GG G +SFRREK++ GGPDGG GG+GGDV +NL TL + + Sbjct: 4 FSDETYIDVASGNGGNGCVSFRREKYVPMGGPDGGDGGKGGDVVFVVRNNLRTLSHLKKE 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HF+A+ G G + + G G D+ + VP GT + + +I DL E +R + GG Sbjct: 64 RHFRAETGRNGSGQRKYGRDGNDIEIPVPPGTVIKDARSGEVIKDLTNE-ERWVFLKGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+SST QAP +A PG GQE I ++L++IAD+G +G PNAGKS+ L +T A Sbjct: 123 GGQGNWHFRSSTRQAPRFAQPGEPGQEMRIGVELQIIADLGFVGFPNAGKSSLLNLLTNA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 + K+A YPFTT P LG+ + G + +LADIPGII+ A +GAG+G +FLKH RT L+ Sbjct: 183 RAKVAGYPFTTRIPQLGMFRYGDHDVVLADIPGIIEGASEGAGMGFKFLKHISRTIGLVF 242 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQ 302 +V ++N AY + EL AY EL +K ++ +++ D D A + E+ T Sbjct: 243 LVDLSDDNYLTAYAALKGELGAYAPELLEKKHVIIGTKL---DEDGTAERLEEVRTAYPD 299 Query: 303 VP 304 VP Sbjct: 300 VP 301 >gi|257092395|ref|YP_003166036.1| GTP-binding protein Obg/CgtA [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044919|gb|ACV34107.1| GTP-binding protein Obg/CgtA [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 365 Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 141/340 (41%), Positives = 217/340 (63%), Gaps = 14/340 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G SFRR+K+ GGPDGG GG GG+V A N+NTLI++R Sbjct: 1 MKFIDEARILVAAGDGGNGIASFRRDKYEPEGGPDGGDGGHGGNVHFVADRNVNTLIEYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + ++AQ G G + G +G+D+ L VPVGT + + + ++ DLD +G++ +LA G Sbjct: 61 YVRRYRAQRGTNGGSSDCYGKRGKDLTLHVPVGTVIADVNTNEVLADLDIDGKKFLLARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSS N+ P G G+++ + L+L+L+AD+G++GLPNAGKSTFL +V+ Sbjct: 121 GRGGLGNIHFKSSVNRTPRQCTRGEPGEQRELRLELRLLADVGLLGLPNAGKSTFLRAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PK+ADYPFTTL+P+LG+V+ + F++ADIPG+I+ A GAG+G RFLKH RT + Sbjct: 181 AARPKVADYPFTTLHPHLGVVRTAPDRSFVIADIPGLIEGAADGAGLGIRFLKHLARTRL 240 Query: 240 LLHIVSALEENVQA----AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 LLHIV + A ++ EL Y+ +L K + +++D + ++ ++ Sbjct: 241 LLHIVDLAPPDPDADPIGDSLNVVSELEKYDPQLASKARWLVFNKLDLIPAE---EREER 297 Query: 296 LAT------QCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 +A G F S+I+G G + + L + + ++ Sbjct: 298 IAAFLRGVGAAGSPCFRISAISGDGCRALTQKLQEALDTL 337 >gi|91227102|ref|ZP_01261586.1| GTP1/Obg family protein [Vibrio alginolyticus 12G01] gi|91188754|gb|EAS75041.1| GTP1/Obg family protein [Vibrio alginolyticus 12G01] Length = 346 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 121/286 (42%), Positives = 182/286 (63%), Gaps = 8/286 (2%) Query: 46 WIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLI 105 +IQA NLNTLID+R+Q+ ++A+ GE G N +G +G+D+VL VPVGT+ + ++ Sbjct: 1 YIQADENLNTLIDYRFQRFYEAERGENGRGGNCTGKRGKDIVLRVPVGTRAVDIHTNEIV 60 Query: 106 CDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGII 165 ++ + G+++++A GG G GN FKSS N+AP G G+ + I L+L L+AD+G++ Sbjct: 61 AEVAEHGKKVMIAKGGWHGLGNTRFKSSVNRAPRQRTLGTKGEVREIRLELLLLADVGML 120 Query: 166 GLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGA 224 GLPNAGKSTF+ +V+ AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A GA Sbjct: 121 GLPNAGKSTFIRAVSAAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGA 180 Query: 225 GIGDRFLKHTERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 G+G RFLKH ER VLLH++ + + VQ A I+DEL Y+ +L K + ++ Sbjct: 181 GLGIRFLKHLERCRVLLHMIDIMPIDQSDPVQNAL-TIIDELEQYSEKLASKPRWLVFNK 239 Query: 281 IDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHD 324 +D + + K E+ G F+ S+I +G ++ L D Sbjct: 240 VDLMPEEEANEKIQEILDALGWEDEYFKISAINRNGTKELCYKLAD 285 >gi|171779940|ref|ZP_02920844.1| hypothetical protein STRINF_01727 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281288|gb|EDT46723.1| hypothetical protein STRINF_01727 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 437 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 206/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVKAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ ++A GG Sbjct: 64 RIFKAKSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETNKVITDLVENGQEFVVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERELQLELKILADVGLVGFPSVGKSTLLSVVTAA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 244 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAEENLKVFKEKLA 303 Query: 298 TQC---GQVP--FEFSSITGHGIPQILEC 321 ++P F SS+ G+ ++E Sbjct: 304 ANYDDFDEMPMIFPISSLAHQGLENLMEA 332 >gi|330444218|ref|YP_004377204.1| GTP-binding protein Obg/CgtA [Chlamydophila pecorum E58] gi|328807328|gb|AEB41501.1| GTP-binding protein Obg/CgtA [Chlamydophila pecorum E58] Length = 336 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 131/333 (39%), Positives = 196/333 (58%), Gaps = 9/333 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ + +++G GG G +S+R+EK + GGP GG+GG GG + I+A +N +L +R Sbjct: 2 FVDQVTLELQAGKGGNGVVSWRKEKCLPKGGPYGGNGGMGGSIIIEAVTNECSLDIYRNV 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KA G+ G NR+G GED+VL VP GT + + ++ D G+R+++ GG Sbjct: 62 RFLKASDGQNGATNNRTGRNGEDLVLKVPEGTLLRDAKTGEVLYDFTSHGERLVVCRGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK+STN+AP A PG G+ + + L+LKLIADIG++G PNAGKST ++ Sbjct: 122 GGKGNTFFKTSTNRAPTKATPGTPGECRQVELELKLIADIGMVGFPNAGKSTLFNTLAST 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-----YKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 + K+ YPFTTL P+LG++ K ++LADIPGII+ AH G+G FLKH ERT Sbjct: 182 EAKVGAYPFTTLTPSLGLISRPGNDLYLKPWVLADIPGIIEGAHNNRGLGLDFLKHIERT 241 Query: 238 HVLLHIV--SALEENV-QAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 +LL +V S E N + Q ++ EL +Y +L K +V L++ID + + + Sbjct: 242 RLLLFVVDISKSERNTPEEDLQILIQELQSYKEDLSHKDMVVALNKIDELLPEEQQERLE 301 Query: 295 ELATQCGQVPFE-FSSITGHGIPQILECLHDKI 326 F S +TG GI ++L C ++ Sbjct: 302 SFQESFPSCTFVLLSGLTGEGIEELLGCFKQRL 334 >gi|156744181|ref|YP_001434310.1| GTP-binding protein Obg/CgtA [Roseiflexus castenholzii DSM 13941] gi|156235509|gb|ABU60292.1| GTP-binding protein Obg/CgtA [Roseiflexus castenholzii DSM 13941] Length = 454 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 205/329 (62%), Gaps = 4/329 (1%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F D A++++++GDGG G +FRREK++ GGPDGG GGRGG V++ A LNTL+ FR Sbjct: 19 EFYDSARIFVQAGDGGDGAATFRREKYVPRGGPDGGDGGRGGHVYLVADPGLNTLLPFRE 78 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEE-DGISLICDLDQEGQRIILAPG 120 + F A+ G G + + G G DV + VPVGT DG + DLD G R++ A G Sbjct: 79 RTRFIAERGGNGGRSRKHGRNGRDVFIRVPVGTVARTVIDGETYSVDLDAPGLRLLAARG 138 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF +S+ Q P A G G+ + I L+LKL+AD+G+IG PNAGKST L+ ++ Sbjct: 139 GRGGLGNVHFATSSYQVPRIAELGEPGERREIELELKLLADVGLIGFPNAGKSTLLSVIS 198 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIA YPFTTL PNLG+V+ G F++ADIPG+I+ AH+G G+G FL+H ERT +L Sbjct: 199 AARPKIAPYPFTTLQPNLGVVEVGEYSFVVADIPGLIEGAHRGVGLGFSFLRHIERTRLL 258 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +HI+ A + + + I +EL Y L ++ ++V L++ D ++ ++ Sbjct: 259 IHIIDAAGVDGRDPVNDFSAINEELRLYQPALAQRPQVVALNKADLPEAQANLKRLRAAI 318 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI 326 Q F S+ T G+ +L+ + +++ Sbjct: 319 PVSEQDLFVISAATREGVDALLQRVAERL 347 >gi|227551353|ref|ZP_03981402.1| GTP-binding protein [Enterococcus faecium TX1330] gi|227179472|gb|EEI60444.1| GTP-binding protein [Enterococcus faecium TX1330] Length = 435 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 204/333 (61%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 2 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVILVVDEGLRTLMDFRFN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GE GM + G ED + VP GT V + + +L+ DL + GQ +++A GG Sbjct: 62 RHFKAQPGENGMSKGMHGRGSEDTYVKVPQGTTVRDAETGALLGDLIENGQTLVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 122 GGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 RPKIGAYHFTTLVPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I ELS YN L ++ +I+ +++D D+ + L + K +L Sbjct: 242 HVIDMSGMEGRDPYEDYLAINKELSTYNLRLLERPQIIVANKMDMPDAQENLVKFKEQLN 301 Query: 298 TQ-----CGQVP-FEFSSITGHGIPQILECLHD 324 + +P F S +T G+ +L D Sbjct: 302 KEKEDEFADDIPVFPISGVTRQGLDALLNATAD 334 >gi|257089853|ref|ZP_05584214.1| GTPase ObgE [Enterococcus faecalis CH188] gi|312903275|ref|ZP_07762455.1| Obg family GTPase CgtA [Enterococcus faecalis TX0635] gi|256998665|gb|EEU85185.1| GTPase ObgE [Enterococcus faecalis CH188] gi|310633151|gb|EFQ16434.1| Obg family GTPase CgtA [Enterococcus faecalis TX0635] gi|315577739|gb|EFU89930.1| Obg family GTPase CgtA [Enterococcus faecalis TX0630] Length = 436 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 208/333 (62%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 2 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVVLVVEEGLRTLMDFRFN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM + G ED+++ VP GT V + +LI DL + GQ +++A GG Sbjct: 62 RHFKATPGENGMSKGMHGRGSEDLLVKVPPGTTVRNAETGALIGDLIENGQTLVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 122 GGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 RPKIGAYHFTTLVPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I EL+++N L ++ +I+ +++D ++ + LA+ K +LA Sbjct: 242 HVIDMSGMEGRDPYEDYLAINKELASHNLRLMERPQIIVANKMDMPEAEENLAKFKEQLA 301 Query: 298 TQ-----CGQVP-FEFSSITGHGIPQILECLHD 324 + ++P F S +T GI +L D Sbjct: 302 KERTDEYADELPIFPISGVTRKGIEPLLNATAD 334 >gi|162447231|ref|YP_001620363.1| GTP-binding protein Obg/CgtA [Acholeplasma laidlawii PG-8A] gi|261266624|sp|A9NF57|OBG_ACHLI RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|161985338|gb|ABX80987.1| GTP-binding protein Obg/CgtA [Acholeplasma laidlawii PG-8A] Length = 419 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 124/281 (44%), Positives = 182/281 (64%), Gaps = 1/281 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V +++G GG G ++FRRE +EFGGP GG+GGRGG ++ NTLID +Y Sbjct: 4 FVDAVTVEVKAGRGGNGKVAFRREAHVEFGGPAGGNGGRGGHIYFIGDEGKNTLIDLKYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H KA +G G + GA ED + VP+GT V++ D +LI ++ + GQ +++A GG Sbjct: 64 RHIKAANGVHGGPKGMHGAHAEDTYVRVPLGTIVYD-DKENLIGEVLEHGQTLLIAQGGK 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S+ N+AP +A G LGQ + ++L+++AD+G++G PN GKST + ++ A Sbjct: 123 GGRGNMAFASNNNKAPDFAEQGDLGQIFLAKVELQVLADVGLLGYPNVGKSTLITRISNA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 K KIADY FTTL P LG+V F++AD+PG+I+ AH G G+G +FLKH ER VLLH Sbjct: 183 KAKIADYQFTTLSPQLGMVNVEDDAFVVADLPGLIEFAHLGVGLGLQFLKHVERCRVLLH 242 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT 283 IVS + Y I +EL Y+ +L+ + +IV +++D Sbjct: 243 IVSMDSLDPLDDYNKINNELVLYDEKLKDRTQIVVANKMDV 283 >gi|257887534|ref|ZP_05667187.1| GTP-binding protein [Enterococcus faecium 1,141,733] gi|257823588|gb|EEV50520.1| GTP-binding protein [Enterococcus faecium 1,141,733] Length = 437 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 204/333 (61%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 4 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVILVVDEGLRTLMDFRFN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GE GM + G ED + VP GT V + + +L+ DL + GQ +++A GG Sbjct: 64 RHFKAQPGENGMSKGMHGRGSEDTYVKVPQGTTVRDAETGALLGDLIENGQTLVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 124 GGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 RPKIGAYHFTTLVPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I ELS YN L ++ +I+ +++D D+ + L + K +L Sbjct: 244 HVIDMSGMEGRDPYEDYLAINKELSTYNLRLLERPQIIVANKMDMPDAQENLVKFKEQLN 303 Query: 298 TQ-----CGQVP-FEFSSITGHGIPQILECLHD 324 + +P F S +T G+ +L D Sbjct: 304 KEKEDEFADDIPVFPISGVTRQGLDALLNATAD 336 >gi|257866160|ref|ZP_05645813.1| GTP-binding protein [Enterococcus casseliflavus EC30] gi|257872490|ref|ZP_05652143.1| GTP-binding protein [Enterococcus casseliflavus EC10] gi|257800094|gb|EEV29146.1| GTP-binding protein [Enterococcus casseliflavus EC30] gi|257806654|gb|EEV35476.1| GTP-binding protein [Enterococcus casseliflavus EC10] Length = 437 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 207/333 (62%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 4 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVILVVDEGLRTLMDFRFN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GE GM + G +D + VP GT V + + +L+ DL ++GQ +++A GG Sbjct: 64 RHFKAQPGENGMSKGMHGRGSDDTYIKVPQGTTVRDAETGALLGDLIEQGQTLVIAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 124 GGRGNIRFASPKNPAPELAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 RPKIGAYHFTTLVPNLGMVTTTDGRSFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I +ELS +N L ++ +I+ +++D D+ + LA K +LA Sbjct: 244 HVIDMSGMEGRDPYEDYLSINNELSTHNLRLLERPQIIVANKMDMPDAEENLALFKEQLA 303 Query: 298 TQCGQ------VPFEFSSITGHGIPQILECLHD 324 + + F S +T GI +L D Sbjct: 304 KEKTDEFADEPMIFPISGVTRKGIDALLNATAD 336 >gi|261277903|sp|A7NRU6|OBG_ROSCS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 439 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 205/329 (62%), Gaps = 4/329 (1%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F D A++++++GDGG G +FRREK++ GGPDGG GGRGG V++ A LNTL+ FR Sbjct: 4 EFYDSARIFVQAGDGGDGAATFRREKYVPRGGPDGGDGGRGGHVYLVADPGLNTLLPFRE 63 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEE-DGISLICDLDQEGQRIILAPG 120 + F A+ G G + + G G DV + VPVGT DG + DLD G R++ A G Sbjct: 64 RTRFIAERGGNGGRSRKHGRNGRDVFIRVPVGTVARTVIDGETYSVDLDAPGLRLLAARG 123 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF +S+ Q P A G G+ + I L+LKL+AD+G+IG PNAGKST L+ ++ Sbjct: 124 GRGGLGNVHFATSSYQVPRIAELGEPGERREIELELKLLADVGLIGFPNAGKSTLLSVIS 183 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIA YPFTTL PNLG+V+ G F++ADIPG+I+ AH+G G+G FL+H ERT +L Sbjct: 184 AARPKIAPYPFTTLQPNLGVVEVGEYSFVVADIPGLIEGAHRGVGLGFSFLRHIERTRLL 243 Query: 241 LHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +HI+ A + + + I +EL Y L ++ ++V L++ D ++ ++ Sbjct: 244 IHIIDAAGVDGRDPVNDFSAINEELRLYQPALAQRPQVVALNKADLPEAQANLKRLRAAI 303 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKI 326 Q F S+ T G+ +L+ + +++ Sbjct: 304 PVSEQDLFVISAATREGVDALLQRVAERL 332 >gi|257896029|ref|ZP_05675682.1| GTP-binding protein [Enterococcus faecium Com12] gi|293378799|ref|ZP_06624956.1| Obg family GTPase CgtA [Enterococcus faecium PC4.1] gi|257832594|gb|EEV59015.1| GTP-binding protein [Enterococcus faecium Com12] gi|292642592|gb|EFF60745.1| Obg family GTPase CgtA [Enterococcus faecium PC4.1] Length = 437 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 204/333 (61%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 4 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVILVVDEGLRTLMDFRFN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GE GM + G ED + VP GT V + + +L+ DL + GQ +++A GG Sbjct: 64 RHFKAQPGENGMSKGMHGRGSEDTYVKVPQGTTVRDAETGALLGDLIENGQTLVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 124 GGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 RPKIGAYHFTTLVPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I ELS YN L ++ +I+ +++D D+ + L + K +L Sbjct: 244 HVIDMSGMEGRDPYEDYLAINKELSTYNLRLLERPQIIVANKMDMPDAQENLVKFKEQLN 303 Query: 298 TQ-----CGQVP-FEFSSITGHGIPQILECLHD 324 + +P F S +T G+ +L D Sbjct: 304 KEKEDEFADDIPVFPISGVTRQGLDALLNATAD 336 >gi|269125793|ref|YP_003299163.1| GTP-binding protein Obg/CgtA [Thermomonospora curvata DSM 43183] gi|268310751|gb|ACY97125.1| GTP-binding protein Obg/CgtA [Thermomonospora curvata DSM 43183] Length = 463 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 135/340 (39%), Positives = 206/340 (60%), Gaps = 12/340 (3%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++ +GDGG G S REKF GGPDGG+GGRGGDV + + +L+++ Sbjct: 6 QFIDRVVLHVAAGDGGHGCASVHREKFKPLGGPDGGNGGRGGDVILVVDTGTASLLEYHR 65 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H +A +G+ G +R+GA GEDVVL VP GT V DG ++ DL EG R ++A GG Sbjct: 66 RPHRRAGNGKPGQGSHRNGADGEDVVLPVPDGTVVMTTDG-QVLADLVGEGTRFVVARGG 124 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G++ I L+LK +AD+ ++G P+AGKS+ +A+++ Sbjct: 125 RGGLGNAALASPKRKAPGFALLGEEGEKLDIVLELKSVADVALVGFPSAGKSSLIAALSA 184 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A+PKIADYPFTTL PNLG+V+ G F +AD+PG+I+ A +G G+G FL+H ER+ ++ Sbjct: 185 ARPKIADYPFTTLTPNLGVVEAGDTTFTVADVPGLIEGASRGRGLGLEFLRHIERSSTIV 244 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNSELRKKI-------EIVGLSQIDTVDSDTLA 290 H++ + LE + Y+ I EL AY+ L + + ++ L++ID D LA Sbjct: 245 HVLDCATLEPGRDPLTDYEVIEKELQAYDRALGEHVRPLSDRPRLIALNKIDVPDGRELA 304 Query: 291 RKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 + G FE S+ T G+ ++ + + + S R Sbjct: 305 ELVRPEFEERGLKVFEVSAATREGLRELSFAMAEMVRSYR 344 >gi|69249875|ref|ZP_00605054.1| GTP-binding protein, HSR1-related:GTP1/OBG subdomain [Enterococcus faecium DO] gi|68194066|gb|EAN08613.1| GTP-binding protein, HSR1-related:GTP1/OBG subdomain [Enterococcus faecium DO] Length = 365 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 204/333 (61%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 4 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVILIVDEGLRTLMDFRFN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GE GM + G ED + VP GT V + + +L+ DL + GQ +++A GG Sbjct: 64 RHFKAQPGENGMSKGMHGRGSEDTYVKVPQGTTVRDAETGALLGDLIENGQTLVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 124 GGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 RPKIGAYHFTTLVPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I ELS YN L ++ +I+ +++D D+ + L + K +L Sbjct: 244 HVIDMSGMEGRDPYEDYLAINKELSTYNLRLLERPQIIVANKMDMPDAQENLVKFKEQLN 303 Query: 298 TQ-----CGQVP-FEFSSITGHGIPQILECLHD 324 + +P F S +T G+ +L D Sbjct: 304 KEKEDEFADDIPVFPISGVTRQGLDALLNATAD 336 >gi|313665421|ref|YP_004047292.1| Obg family GTPase CgtA [Mycoplasma leachii PG50] gi|312949823|gb|ADR24419.1| Obg family GTPase CgtA [Mycoplasma leachii PG50] Length = 433 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 126/287 (43%), Positives = 190/287 (66%), Gaps = 5/287 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D A + I++G GG G +SF F+ GGP+GG GG GG V+ Q ++L+D + Sbjct: 1 MKFVDSADLIIKAGKGGDGAVSFLHALFVPNGGPNGGDGGDGGSVYFQGDEGKHSLLDLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ + AQ G KG +N GAKGED ++ VPVGT ++++ +++ D+++ + +++A G Sbjct: 61 LQKKYSAQDGFKGDIKNMHGAKGEDKIIKVPVGTILYDKKTNNILADINENNKLVLIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F +S N+AP G LGQE I +LK++AD+G +GLPNAGKST L +++ Sbjct: 121 GKGGKGNARFANSRNKAPTIFEAGELGQEFEIRAELKVLADVGFVGLPNAGKSTLLRAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +KP +ADYPFTT+ P LG+ + + FI+AD+PG+I+ A G G+G +FLKH ER V Sbjct: 181 NSKPVVADYPFTTITPQLGVARTKNNDTFIVADLPGLIQGASLGKGLGHQFLKHIERCLV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 + HI+ A E++ Y+ I +EL AYN L K+ EI+ L+++D Sbjct: 241 ICHIIDASGNFGSEDIIKNYELIRNELKAYNLNLEKRAEIIVLNKMD 287 >gi|320335703|ref|YP_004172414.1| GTPase obg [Deinococcus maricopensis DSM 21211] gi|319756992|gb|ADV68749.1| GTPase obg [Deinococcus maricopensis DSM 21211] Length = 433 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 139/331 (41%), Positives = 207/331 (62%), Gaps = 8/331 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F D + + +G+GG G +SF R K++E GGPDGG GGRGG + ++A + +L Sbjct: 1 MAFRDVLDIEVIAGNGGDGSMSFHRAKYMEKGGPDGGHGGRGGSIVLRAIEGVESLERLV 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ FKA++G G R R G+ G D+V+ VPVGT F+ D ++ DL Q GQ ++A G Sbjct: 61 GKRKFKAENGAYGEGRLRQGSDGADLVIDVPVGTTAFDADSGKILADLVQVGQTKVIASG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN+ F SST QAP +A G G+ + + L+L+LIAD+G++G PNAGKS+ LA+++ Sbjct: 121 GYGGRGNSVFASSTRQAPRFAELGTRGERRRVRLELRLIADVGLVGYPNAGKSSLLAALS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 A P IADYPFTTL P LG+V+E ++ F +ADIPGII+ A +G G+G FL+H RT Sbjct: 181 NANPAIADYPFTTLSPILGVVQEDDRDRRFTMADIPGIIEGASEGKGLGLEFLRHISRTR 240 Query: 239 VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 +L+++++A + + Q + EL +Y+ L + +V L+++D +D D A + EL T Sbjct: 241 LLVYVLAADRDPI-GELQQLQAELRSYDPSLLENAALVALNKLDLIDEDIAAMIEEEL-T 298 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 Q G S+ Q +E L D IF + Sbjct: 299 QFGLPVLRVSARE----RQHIETLRDTIFEL 325 >gi|302534381|ref|ZP_07286723.1| obg family GTPase CgtA [Streptomyces sp. C] gi|302443276|gb|EFL15092.1| obg family GTPase CgtA [Streptomyces sp. C] Length = 481 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 134/333 (40%), Positives = 198/333 (59%), Gaps = 5/333 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G+GG G S REKF GGPDGG+GGRGGDV + + TL+D+ + Sbjct: 4 FVDRVELHVAAGNGGHGCASVHREKFKPLGGPDGGNGGRGGDVILVVEQAITTLLDYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG G+D+VL VP GT V ++ G +++ DL +G + A GG Sbjct: 64 PHRKATNGKPGEGGNRSGKDGQDLVLPVPDGTVVLDKQG-NVLADLVGQGTTYVAAEGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G+ G I L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALSSARRKAPGFALLGVPGDSGDIVLELKTVADVALVGFPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGSTVYTIADVPGLIPGASQGKGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + LE + A I +EL Y L K+ +V L+++D D LA Sbjct: 243 VLDTATLETDRDPVADLDVIEEELKIYGGGLEKRPRLVVLNKVDIPDGQELADMVRPDLE 302 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 G FE S++ G+ ++ L + + R Sbjct: 303 ARGYKVFEVSAVARTGLKELSYFLAEVVAKARA 335 >gi|271968503|ref|YP_003342699.1| GTPase ObgE [Streptosporangium roseum DSM 43021] gi|270511678|gb|ACZ89956.1| GTPase ObgE [Streptosporangium roseum DSM 43021] Length = 450 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 130/328 (39%), Positives = 200/328 (60%), Gaps = 5/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ ++I++GDGG G S REKF GGPDGG+GGRGGDV ++ N TL+++ + Sbjct: 4 FVDQVVLHIKAGDGGHGCASVHREKFKPLGGPDGGNGGRGGDVILEVDPNTATLLEYHRR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G +G NR GA G D++L VP GT V + ++ DL G R +LA GG+ Sbjct: 64 PHRKADNGRQGSGANRDGANGGDIILAVPDGTVVKDAVSGEVLIDLVGAGTRYVLAEGGH 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G E + L++K +AD+ ++G P+AGKS+ +A+++ A Sbjct: 124 GGLGNAALASAKRKAPGFALLGEPGDELDVMLEMKSVADVALVGFPSAGKSSLIAALSAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V G F +AD+PG+I A +G G+G FL+H ER + L+H Sbjct: 184 RPKIADYPFTTLVPNLGVVTAGDTIFTVADVPGLIPGASEGKGLGHEFLRHVERCNTLVH 243 Query: 243 IV--SALE--ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + +E + + Y+ I EL AY +L + + L++ D D+ LA + Sbjct: 244 VIDCATMEPGRDPISDYEAIEAELKAYG-KLEDRPRLAVLNKADVPDARELADIVRPMLE 302 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKI 326 + G F S+ T G+ ++ + + + Sbjct: 303 ERGLRVFSISAATHEGLKELTYAMGEMV 330 >gi|315147232|gb|EFT91248.1| Obg family GTPase CgtA [Enterococcus faecalis TX4244] Length = 436 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 208/333 (62%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 2 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVVLVVEEGLRTLMDFRFN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM + G ED+++ VP GT V + + +LI DL + GQ +++A GG Sbjct: 62 RHFKATPGENGMSKGMHGRGSEDLLVKVPPGTTVRDAETGALIGDLIENGQTLVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 122 GGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 RPKIGAYHFTTLVPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I EL ++N L ++ +I+ +++D ++ + LA+ K +LA Sbjct: 242 HVIDMSGMEGRDPYEDYLAINKELVSHNLRLMERPQIIVANKMDMPEAEENLAKFKEQLA 301 Query: 298 TQ-----CGQVP-FEFSSITGHGIPQILECLHD 324 + ++P F S +T GI +L D Sbjct: 302 KERTDEYADELPIFPISGVTRKGIEPLLNATAD 334 >gi|257898657|ref|ZP_05678310.1| GTP-binding protein [Enterococcus faecium Com15] gi|293569800|ref|ZP_06680887.1| GTP-binding protein [Enterococcus faecium E1071] gi|293570540|ref|ZP_06681595.1| GTP-binding protein [Enterococcus faecium E980] gi|257836569|gb|EEV61643.1| GTP-binding protein [Enterococcus faecium Com15] gi|291587548|gb|EFF19425.1| GTP-binding protein [Enterococcus faecium E1071] gi|291609486|gb|EFF38753.1| GTP-binding protein [Enterococcus faecium E980] Length = 437 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 204/333 (61%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 4 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVILIVDEGLRTLMDFRFN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GE GM + G ED + VP GT V + + +L+ DL + GQ +++A GG Sbjct: 64 RHFKAQPGENGMSKGMHGRGSEDTYVKVPQGTTVRDAETGALLGDLIENGQTLVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 124 GGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 RPKIGAYHFTTLVPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I ELS YN L ++ +I+ +++D D+ + L + K +L Sbjct: 244 HVIDMSGMEGRDPYEDYLAINKELSTYNLRLLERPQIIVANKMDMPDAQENLVKFKEQLN 303 Query: 298 TQ-----CGQVP-FEFSSITGHGIPQILECLHD 324 + +P F S +T G+ +L D Sbjct: 304 KEKEDEFADDIPVFPISGVTRQGLDALLNATAD 336 >gi|113955152|ref|YP_731590.1| GTPase ObgE [Synechococcus sp. CC9311] gi|123132403|sp|Q0I7I2|OBG_SYNS3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|113882503|gb|ABI47461.1| GTP-binding protein, GTP1/OBG family protein [Synechococcus sp. CC9311] Length = 329 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 135/329 (41%), Positives = 206/329 (62%), Gaps = 5/329 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ +R G GG G ++FRREK++ GGP GG GG+G DV ++A SNL TL+DF+ Sbjct: 1 MQFIDQARISVRGGRGGDGIVAFRREKYVPAGGPSGGDGGQGADVVLEADSNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F G +G +GA G +V+ VP GT+V ++ DL +R+ +A G Sbjct: 61 YKRLFAGIDGRRGGPNRCTGASGPPLVIKVPCGTEVRHLSTGIVLGDLTTHEERLTVAFG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S+ N+AP G G+E + L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GRGGLGNAHYLSNRNRAPEKCTEGRDGEEWPLQLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ + + ADIPG+I A QGAG+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLIPNLGVVRRPTGDGTVFADIPGLIAGAAQGAGLGHDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V E+ + + EL AY L ++ I+ +++ + + + L + L Sbjct: 241 LIHLVDGGAEDPLLDLRVVEKELEAYGHGLVERPRILVINKQELIQEEDLDAIVSALTEA 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFS 328 G+ P S+ G+ +L D+++S Sbjct: 301 SGRTPLLVSAAMNRGLDDML----DRVWS 325 >gi|26553646|ref|NP_757580.1| GTPase ObgE [Mycoplasma penetrans HF-2] gi|81846237|sp|Q8EWL0|OBG_MYCPE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|26453652|dbj|BAC43984.1| GTP-binding protein Obg [Mycoplasma penetrans HF-2] Length = 429 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 125/287 (43%), Positives = 180/287 (62%), Gaps = 3/287 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 +D+ +++R+G+GG G IS+R+E GGP GG GG+GGDV+I NLN+LID RY+ Sbjct: 2 LIDKCTLFLRAGNGGNGVISWRKEAHYPEGGPWGGDGGKGGDVYIIGDHNLNSLIDLRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +A+ GE G + +G G D+ + VPVGT + +I D+ GQ+ ++ GG Sbjct: 62 KKIEAEDGENGKTKLATGKNGNDIYIKVPVGTTITNSITNEVIVDILVTGQKYLICKGGM 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA+FKSS N+ P G LG+ +LK IAD+G++GLPNAGKST + S++ Sbjct: 122 GGKGNAYFKSSKNRIPNLCENGELGETIEAQFELKYIADVGLLGLPNAGKSTLVNSLSNT 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 K A+Y FTTL P+LG+V + + ADIPGII++A G+G+G FLKH ER H L+H Sbjct: 182 NLKTANYMFTTLSPSLGVVNFEDEHLVFADIPGIIEDASNGSGLGLDFLKHIERCHFLIH 241 Query: 243 IVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 ++S EN Y I++EL YN E+ K+ + L++ID DS Sbjct: 242 LISVANIDTENPFKDYLTIVEELKKYNKEILKRKIFIVLNKIDENDS 288 >gi|257878179|ref|ZP_05657832.1| GTP-binding protein [Enterococcus faecium 1,230,933] gi|257881038|ref|ZP_05660691.1| GTP-binding protein [Enterococcus faecium 1,231,502] gi|257889623|ref|ZP_05669276.1| GTP-binding protein [Enterococcus faecium 1,231,410] gi|257892436|ref|ZP_05672089.1| GTP-binding protein [Enterococcus faecium 1,231,408] gi|260559225|ref|ZP_05831411.1| GTP-binding protein [Enterococcus faecium C68] gi|261207758|ref|ZP_05922443.1| GTP-binding protein [Enterococcus faecium TC 6] gi|314939156|ref|ZP_07846413.1| Obg family GTPase CgtA [Enterococcus faecium TX0133a04] gi|314943925|ref|ZP_07850642.1| Obg family GTPase CgtA [Enterococcus faecium TX0133C] gi|314948034|ref|ZP_07851437.1| Obg family GTPase CgtA [Enterococcus faecium TX0082] gi|314953291|ref|ZP_07856222.1| Obg family GTPase CgtA [Enterococcus faecium TX0133A] gi|314993364|ref|ZP_07858731.1| Obg family GTPase CgtA [Enterococcus faecium TX0133B] gi|314994950|ref|ZP_07860071.1| Obg family GTPase CgtA [Enterococcus faecium TX0133a01] gi|257812407|gb|EEV41165.1| GTP-binding protein [Enterococcus faecium 1,230,933] gi|257816696|gb|EEV44024.1| GTP-binding protein [Enterococcus faecium 1,231,502] gi|257825983|gb|EEV52609.1| GTP-binding protein [Enterococcus faecium 1,231,410] gi|257828815|gb|EEV55422.1| GTP-binding protein [Enterococcus faecium 1,231,408] gi|260074982|gb|EEW63298.1| GTP-binding protein [Enterococcus faecium C68] gi|260078141|gb|EEW65847.1| GTP-binding protein [Enterococcus faecium TC 6] gi|313590807|gb|EFR69652.1| Obg family GTPase CgtA [Enterococcus faecium TX0133a01] gi|313592148|gb|EFR70993.1| Obg family GTPase CgtA [Enterococcus faecium TX0133B] gi|313594673|gb|EFR73518.1| Obg family GTPase CgtA [Enterococcus faecium TX0133A] gi|313597429|gb|EFR76274.1| Obg family GTPase CgtA [Enterococcus faecium TX0133C] gi|313641536|gb|EFS06116.1| Obg family GTPase CgtA [Enterococcus faecium TX0133a04] gi|313645514|gb|EFS10094.1| Obg family GTPase CgtA [Enterococcus faecium TX0082] Length = 435 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 204/333 (61%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 2 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVILIVDEGLRTLMDFRFN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GE GM + G ED + VP GT V + + +L+ DL + GQ +++A GG Sbjct: 62 RHFKAQPGENGMSKGMHGRGSEDTYVKVPQGTTVRDAETGALLGDLIENGQTLVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 122 GGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 RPKIGAYHFTTLVPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I ELS YN L ++ +I+ +++D D+ + L + K +L Sbjct: 242 HVIDMSGMEGRDPYEDYLAINKELSTYNLRLLERPQIIVANKMDMPDAPENLVKFKEQLN 301 Query: 298 TQ-----CGQVP-FEFSSITGHGIPQILECLHD 324 + +P F S +T G+ +L D Sbjct: 302 KEKEDEFADDIPVFPISGVTRQGLDALLNATAD 334 >gi|289565833|ref|ZP_06446275.1| GTPase ObgE [Enterococcus faecium D344SRF] gi|293560349|ref|ZP_06676844.1| GTP-binding protein [Enterococcus faecium E1162] gi|294614053|ref|ZP_06693982.1| Spo0B-associated GTP-binding protein [Enterococcus faecium E1636] gi|294617217|ref|ZP_06696867.1| GTP-binding protein, GTP1/Obg family [Enterococcus faecium E1679] gi|294620552|ref|ZP_06699853.1| GTP-binding protein [Enterococcus faecium U0317] gi|289162376|gb|EFD10234.1| GTPase ObgE [Enterococcus faecium D344SRF] gi|291593099|gb|EFF24679.1| Spo0B-associated GTP-binding protein [Enterococcus faecium E1636] gi|291596530|gb|EFF27773.1| GTP-binding protein, GTP1/Obg family [Enterococcus faecium E1679] gi|291599789|gb|EFF30793.1| GTP-binding protein [Enterococcus faecium U0317] gi|291605694|gb|EFF35133.1| GTP-binding protein [Enterococcus faecium E1162] Length = 437 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 204/333 (61%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 4 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVILIVDEGLRTLMDFRFN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GE GM + G ED + VP GT V + + +L+ DL + GQ +++A GG Sbjct: 64 RHFKAQPGENGMSKGMHGRGSEDTYVKVPQGTTVRDAETGALLGDLIENGQTLVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 124 GGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 RPKIGAYHFTTLVPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I ELS YN L ++ +I+ +++D D+ + L + K +L Sbjct: 244 HVIDMSGMEGRDPYEDYLAINKELSTYNLRLLERPQIIVANKMDMPDAPENLVKFKEQLN 303 Query: 298 TQ-----CGQVP-FEFSSITGHGIPQILECLHD 324 + +P F S +T G+ +L D Sbjct: 304 KEKEDEFADDIPVFPISGVTRQGLDALLNATAD 336 >gi|257884699|ref|ZP_05664352.1| GTP-binding protein [Enterococcus faecium 1,231,501] gi|257820537|gb|EEV47685.1| GTP-binding protein [Enterococcus faecium 1,231,501] Length = 435 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 204/333 (61%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 2 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVILIVDEGLRTLMDFRFN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GE GM + G ED + VP GT V + + +L+ DL + GQ +++A GG Sbjct: 62 RHFKAQPGENGMSKGMHGRGSEDTYVKVPQGTTVRDAETGALLGDLIENGQTLVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 122 GGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 RPKIGAYHFTTLVPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I ELS YN L ++ +I+ +++D D+ + L + K +L Sbjct: 242 HVIDMSGMEGRDPYEDYLAINKELSTYNLRLLERPQIIVANKMDMPDAQENLVKFKEQLN 301 Query: 298 TQ-----CGQVP-FEFSSITGHGIPQILECLHD 324 + +P F S +T G+ +L D Sbjct: 302 KEKEDEFADDIPVFPISGVTRQGLDALLNATAD 334 >gi|269114912|ref|YP_003302675.1| GTP-binding protein Obg [Mycoplasma hominis] gi|268322537|emb|CAX37272.1| GTP-binding protein Obg [Mycoplasma hominis ATCC 23114] Length = 424 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 129/278 (46%), Positives = 182/278 (65%), Gaps = 5/278 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE V + +G GG G ISFRRE ++ GGPDGG GG GGDV+ NTL+ F Sbjct: 1 MKFIDETNVIVIAGKGGDGIISFRREANVDKGGPDGGDGGDGGDVYFVGDPGQNTLLPFY 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ A+ GE G +N+ GA G+D+++ VP+GT V+ +G LI D+ + ++ ++A G Sbjct: 61 YQNKLVAESGENGRPKNQYGADGQDLIVKVPLGTMVY--NGDDLIADVVSQ-EKYLIAKG 117 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GN FKSSTN AP G GQ+ + L LK++AD+G +G P+AG ST L ++ Sbjct: 118 GHGGKGNPRFKSSTNTAPRICENGTPGQKFELHLVLKVLADVGFVGKPSAGNSTILGEIS 177 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADY FTTL P LG+VK +++AD+PG+I+NAH G G+G +FLKH ER ++ Sbjct: 178 NAKPKIADYDFTTLVPQLGLVKYFDNSYVVADLPGLIENAHLGKGLGIQFLKHIERCKII 237 Query: 241 LHIVS--ALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H++ + E+N Y+ I +EL +YN L K ++V Sbjct: 238 AHVIDFGSEEKNPIDDYEIINNELKSYNLLLEKLPQVV 275 >gi|300859007|ref|YP_003783990.1| hypothetical protein cpfrc_01590 [Corynebacterium pseudotuberculosis FRC41] gi|300686461|gb|ADK29383.1| hypothetical protein cpfrc_01590 [Corynebacterium pseudotuberculosis FRC41] gi|302206705|gb|ADL11047.1| GTPase ObgE [Corynebacterium pseudotuberculosis C231] gi|302331258|gb|ADL21452.1| GTPase ObgE [Corynebacterium pseudotuberculosis 1002] gi|308276947|gb|ADO26846.1| GTPase ObgE [Corynebacterium pseudotuberculosis I19] Length = 508 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 140/347 (40%), Positives = 209/347 (60%), Gaps = 21/347 (6%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++ +GDGG G S REKF GGPDGG+GG GGD+ ++ ++ ++TL+D Y Sbjct: 3 RFVDRVVLHLEAGDGGNGCASVHREKFKPLGGPDGGNGGHGGDIVLEVSNQVHTLLDLHY 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + + KA+ G G +R+GA+G+D+VL VP GT V ++G +L DL G + + A GG Sbjct: 63 RPNLKAKRGANGAGDHRNGARGDDLVLEVPAGTVVLAQNGETL-ADLTSPGMKFVAAKGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S+ +AP +A G G+ + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 FGGLGNAALASAARKAPGFALKGEPGEAHDVVLELKSMADVGLVGFPSAGKSSLISVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKI DYPFTTL PNLG+V+ G+ F +AD+PG+I A +G G+G FL+H ERT VL Sbjct: 182 AKPKIGDYPFTTLQPNLGVVEVGHDTFTIADVPGLIPGASEGKGLGLDFLRHIERTAVLA 241 Query: 242 HIVSALE--------------ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 H+V A E AAYQ LDE + +LR + IV L+++D D+ Sbjct: 242 HVVDAATMEPGRDPISDIEALETELAAYQSALDEDTGLG-DLRDRPRIVILNKVDIPDAL 300 Query: 288 TLAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 LA K ++ + G F S++ G L+ L K+ I E+ Sbjct: 301 ELAEFLKEDIEAKFGWPVFIISAVARKG----LDPLRYKLLEIVQED 343 >gi|306833831|ref|ZP_07466956.1| obg family GTPase CgtA [Streptococcus bovis ATCC 700338] gi|304424025|gb|EFM27166.1| obg family GTPase CgtA [Streptococcus bovis ATCC 700338] Length = 437 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 137/329 (41%), Positives = 205/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVKAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ ++A GG Sbjct: 64 RIFKAKSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETNKVITDLVENGQEFVVARGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ VT A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERNLQLELKILADVGLVGFPSVGKSTLLSVVTAA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +L Sbjct: 244 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAEENLKIFKEKLT 303 Query: 298 TQCG---QVP--FEFSSITGHGIPQILEC 321 ++P F SS+ G+ ++E Sbjct: 304 ANYDDFEEMPMIFPISSLAHQGLENLMEA 332 >gi|219854138|ref|YP_002471260.1| hypothetical protein CKR_0795 [Clostridium kluyveri NBRC 12016] gi|219567862|dbj|BAH05846.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 434 Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 135/323 (41%), Positives = 208/323 (64%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A+V+++SG GG G +SFRREK++ GGPDGG GG+GGDV + + TL+DF Y+ Sbjct: 12 FVDRAEVFVKSGSGGNGSVSFRREKYVPRGGPDGGDGGKGGDVILVVDPEITTLLDFSYK 71 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ GE G G GE++ + VP+GT + + D ++ DL G + I+A GG Sbjct: 72 KKYVAEKGENGSGSKCFGKNGENLYIKVPLGTVIRDVDTNKIMADLSHIGDKYIVAKGGK 131 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++ QAP +A PG+ G+E+ I L+LK++AD+G++G PN GKST L+ VT+A Sbjct: 132 GGRGNVRFTTAVRQAPDFAEPGMPGEERYISLELKILADVGLLGFPNVGKSTLLSVVTKA 191 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 PKIA+Y FTTL PNLG+V G + F++ADIPGII+ A +G G+G FL+H ERT +L+ Sbjct: 192 APKIANYHFTTLSPNLGVVNIPGIQSFVIADIPGIIEGAAEGVGLGIDFLRHIERTRLLI 251 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 HIV S LE + + I +EL Y+ +L + +I+ ++ D + D++ + + Sbjct: 252 HIVDISGLEGRDPFGDFIKINEELKKYDVKLWDRPQIIAANKADMLYDDSIFQDFKKKVE 311 Query: 299 QCG-QVPFEFSSITGHGIPQILE 320 G F+ S+ T G+ ++++ Sbjct: 312 NLGYNKVFKISAATRQGVEELMK 334 >gi|254432429|ref|ZP_05046132.1| GTP-binding protein Obg/CgtA [Cyanobium sp. PCC 7001] gi|197626882|gb|EDY39441.1| GTP-binding protein Obg/CgtA [Cyanobium sp. PCC 7001] Length = 346 Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 132/292 (45%), Positives = 197/292 (67%), Gaps = 1/292 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ ++ G GG G ++FRREK++ GGP GG GGRGGDV + A +NL TL+DF+ Sbjct: 1 MQFIDQARIAVKGGRGGDGIVAFRREKYVPAGGPAGGDGGRGGDVLLLADANLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F+A G +G +GA G+ +V+ VP GT+V + L+ DL G +++A G Sbjct: 61 YRRLFQAVDGRRGGPNRCTGASGDHLVIRVPCGTEVRDARTGILLGDLTAPGDELLVAAG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S+ N+AP G G+E + L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GRGGLGNAHYLSNRNRAPEKFTEGKEGEEWTLQLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ + + ADIPG+I A QGAG+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRRPSGDGTVFADIPGLIAGAAQGAGLGHDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 L+H++ A + + ELSAY L ++ +V L++I+ + + LA+ Sbjct: 241 LIHLLDAASPTLLEDLAVVERELSAYGHGLAQRPRLVVLNKIELLQPEDLAQ 292 >gi|269792506|ref|YP_003317410.1| GTP-binding protein Obg/CgtA [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100141|gb|ACZ19128.1| GTP-binding protein Obg/CgtA [Thermanaerovibrio acidaminovorans DSM 6589] Length = 453 Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 131/315 (41%), Positives = 200/315 (63%), Gaps = 3/315 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D A + + +G GG+G +SFRREKF+ GGPDGG+GGRGG+VW+ A N+ TL DF Sbjct: 1 MKFVDVATIKVVAGAGGSGCVSFRREKFVPKGGPDGGNGGRGGNVWLVANRNIQTLADFE 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ ++A+ G G R+G GED+ + VP GT V++ + DL +EG + A G Sbjct: 61 YKRIYRAEDGCPGSGAGRNGKSGEDLFIQVPCGTVVYDASSREVYADLMEEGDMFLAARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F SS +AP +A G G+ + + L+L+LIAD+G++GLPNAGKS+ L +++ Sbjct: 121 GRGGRGNRAFASSVRKAPRFAENGYPGEARELMLELRLIADLGLVGLPNAGKSSLLKALS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A PKIA YPFTT+ PN+G++ + I+ADIPG+I+ AH+ G+G FL+H +RT +L Sbjct: 181 NANPKIAPYPFTTITPNMGVMADHRHRLIIADIPGLIEGAHENRGLGVSFLRHIQRTRML 240 Query: 241 LHIV---SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LH++ S E V A ++ I E+ +++ + +K +V ++ID + + + L Sbjct: 241 LHLLDISSGDVEAVMADWRTIRQEMVSFDPSILEKPCLVVGNKIDLLSPEVRGDIIDHLR 300 Query: 298 TQCGQVPFEFSSITG 312 F F+SI+ Sbjct: 301 GSFTAEGFRFASISA 315 >gi|284030268|ref|YP_003380199.1| GTP-binding protein Obg/CgtA [Kribbella flavida DSM 17836] gi|283809561|gb|ADB31400.1| GTP-binding protein Obg/CgtA [Kribbella flavida DSM 17836] Length = 528 Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 130/336 (38%), Positives = 197/336 (58%), Gaps = 6/336 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V++ G+GG G S REKF GGPDGG+GG GG V ++ +L TL+D+ Sbjct: 6 FVDRVTVHVTGGNGGNGCASVHREKFKPLGGPDGGNGGDGGSVILRVDPDLTTLVDYHRS 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H A +G +G +++G+KG DV+L VP GT + +G ++ DL G + A GG Sbjct: 66 GHRSATNGAQGKGDHQAGSKGADVILPVPDGTVISTPEG-EILADLVGPGAEFVAAQGGK 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA SS +AP +A G G+++ I L+LK++ADIG++G P+AGKS+ +AS++RA Sbjct: 125 GGLGNAALASSARKAPGFALLGEDGEQRTIVLELKVVADIGLVGFPSAGKSSLVASISRA 184 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V G F +AD+PG+I+ A +G G+G FL+H ER L+H Sbjct: 185 RPKIADYPFTTLIPNLGVVVAGDTTFTVADVPGLIEGASEGRGLGHDFLRHVERCAALVH 244 Query: 243 IVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + + I EL A+ L + +V L+++D D+ +A Sbjct: 245 VIDCATYEPGRDPVSDLDTIEAELKAHGG-LEDRPRLVALNKVDVPDAREIAEMVTAELE 303 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 Q G F S+ + G+ + + + + + R E E Sbjct: 304 QRGLRVFSISTASHEGLEALKYAMAELVTARRAEQE 339 >gi|153953516|ref|YP_001394281.1| GTPase ObgE [Clostridium kluyveri DSM 555] gi|261266753|sp|B9E021|OBG_CLOK1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|146346397|gb|EDK32933.1| Predicted GTP-binding protein [Clostridium kluyveri DSM 555] Length = 424 Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 135/323 (41%), Positives = 208/323 (64%), Gaps = 5/323 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A+V+++SG GG G +SFRREK++ GGPDGG GG+GGDV + + TL+DF Y+ Sbjct: 2 FVDRAEVFVKSGSGGNGSVSFRREKYVPRGGPDGGDGGKGGDVILVVDPEITTLLDFSYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ GE G G GE++ + VP+GT + + D ++ DL G + I+A GG Sbjct: 62 KKYVAEKGENGSGSKCFGKNGENLYIKVPLGTVIRDVDTNKIMADLSHIGDKYIVAKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++ QAP +A PG+ G+E+ I L+LK++AD+G++G PN GKST L+ VT+A Sbjct: 122 GGRGNVRFTTAVRQAPDFAEPGMPGEERYISLELKILADVGLLGFPNVGKSTLLSVVTKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 PKIA+Y FTTL PNLG+V G + F++ADIPGII+ A +G G+G FL+H ERT +L+ Sbjct: 182 APKIANYHFTTLSPNLGVVNIPGIQSFVIADIPGIIEGAAEGVGLGIDFLRHIERTRLLI 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 HIV S LE + + I +EL Y+ +L + +I+ ++ D + D++ + + Sbjct: 242 HIVDISGLEGRDPFGDFIKINEELKKYDVKLWDRPQIIAANKADMLYDDSIFQDFKKKVE 301 Query: 299 QCG-QVPFEFSSITGHGIPQILE 320 G F+ S+ T G+ ++++ Sbjct: 302 NLGYNKVFKISAATRQGVEELMK 324 >gi|302519043|ref|ZP_07271385.1| obg family GTPase CgtA [Streptomyces sp. SPB78] gi|302427938|gb|EFK99753.1| obg family GTPase CgtA [Streptomyces sp. SPB78] Length = 481 Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 137/333 (41%), Positives = 203/333 (60%), Gaps = 8/333 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G+GG G S REKF GGPDGG+GGRGGDV + ++ TL+D+ + Sbjct: 4 FVDRVELHVAAGNGGHGCASVHREKFKPLGGPDGGNGGRGGDVILVVEQSVTTLLDYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG +GED+VL VP GT V + +G +++ DL +G + A GG Sbjct: 64 PHRKATNGKPGEGGNRSGKEGEDLVLPVPDGTVVLDREG-NVLADLVGQGTSFVAASGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G + L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALSSARRKAPGFALLGEPGDAGDLLLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V G F +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 RPKIADYPFTTLIPNLGVVTAGETVFTVADVPGLIPGASQGKGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK-KNELA 297 ++ + LE + I +EL Y L K+ +V L++ID D LA + +L Sbjct: 243 VLDTATLESDRDPVSDLDVIEEELKQYGG-LNKRPRVVVLNKIDVPDGKDLAEMVRPDLE 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 + QV FE S++ G+ ++ L D + R Sbjct: 302 ARGYQV-FEVSAVAHTGLRELSFALGDLVARYR 333 >gi|211908959|gb|ACJ12774.1| CgtA [Vibrio parahaemolyticus] Length = 346 Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 122/287 (42%), Positives = 182/287 (63%), Gaps = 8/287 (2%) Query: 45 VWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISL 104 V+IQA NLNTLID+R+Q+ ++A+ GE G N +G +G+D+VL VPVGT+ + + Sbjct: 19 VYIQADENLNTLIDYRFQRFYEAERGENGRGGNCTGKRGKDIVLRVPVGTRAVDIHTNEI 78 Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 + ++ + G+++++A GG G GN FKSS N+AP G G+ + I L+L L+AD+G+ Sbjct: 79 VAEVAEHGKKVMVAKGGWHGLGNTRFKSSVNRAPRQRTLGTKGEIREIRLELLLLADVGM 138 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQG 223 +GLPNAGKSTF+ +V+ AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A G Sbjct: 139 LGLPNAGKSTFIRAVSAAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADG 198 Query: 224 AGIGDRFLKHTERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 AG+G RFLKH ER VLLH++ + + VQ A I+DEL Y+ +L K + + Sbjct: 199 AGLGIRFLKHLERCRVLLHMIDIMPIDQSDPVQNAL-TIIDELEQYSEKLASKPRWLVFN 257 Query: 280 QIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHD 324 ++D + + K E+ G F+ S+I G ++ L D Sbjct: 258 KVDLMPEEEANEKIQEILDALGWEDEYFKISAINRSGTKELCYKLAD 304 >gi|260896912|ref|ZP_05905408.1| Obg family GTPase CgtA [Vibrio parahaemolyticus Peru-466] gi|308088721|gb|EFO38416.1| Obg family GTPase CgtA [Vibrio parahaemolyticus Peru-466] Length = 360 Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 122/287 (42%), Positives = 182/287 (63%), Gaps = 8/287 (2%) Query: 45 VWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISL 104 V+IQA NLNTLID+R+Q+ ++A+ GE G N +G +G+D+VL VPVGT+ + + Sbjct: 15 VYIQADENLNTLIDYRFQRFYEAERGENGRGGNCTGKRGKDIVLRVPVGTRAVDIHTNEI 74 Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 + ++ + G+++++A GG G GN FKSS N+AP G G+ + I L+L L+AD+G+ Sbjct: 75 VAEVAEHGKKVMVAKGGWHGLGNTRFKSSVNRAPRQRTLGTKGEIREIRLELLLLADVGM 134 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQG 223 +GLPNAGKSTF+ +V+ AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A G Sbjct: 135 LGLPNAGKSTFIRAVSAAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADG 194 Query: 224 AGIGDRFLKHTERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 AG+G RFLKH ER VLLH++ + + VQ A I+DEL Y+ +L K + + Sbjct: 195 AGLGIRFLKHLERCRVLLHMIDIMPIDQSDPVQNAL-TIIDELEQYSEKLASKPRWLVFN 253 Query: 280 QIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHD 324 ++D + + K E+ G F+ S+I G ++ L D Sbjct: 254 KVDLMPEEEANEKIQEILDALGWEDEYFKISAINRSGTKELCYKLAD 300 >gi|297379524|gb|ADI34411.1| GTP-binding protein Obg/CgtA [Helicobacter pylori v225d] Length = 342 Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 143/312 (45%), Positives = 197/312 (63%), Gaps = 12/312 (3%) Query: 21 ISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSG 80 +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR +H KA++G G RN +G Sbjct: 2 VSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGTKHHKAKNGAPGGTRNCAG 61 Query: 81 AKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYY 140 KGED ++ VP GTQVF +D + L DL + +R++ GG GG GNAHFKS+ Q P Y Sbjct: 62 KKGEDKIIVVPPGTQVFVDDALWL--DLVEPKKRVLALKGGKGGLGNAHFKSAIKQQPTY 119 Query: 141 ANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI 200 A G+ G EK + L+LKLIADIG++G PNAGKST +++++ KPKIA+Y FTTL PNLG+ Sbjct: 120 AQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNTKPKIANYEFTTLVPNLGV 179 Query: 201 VKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQC 257 V K EF++ADIPGII+ A +G G+G FLKH ERT VL ++ A L+ ++ YQ Sbjct: 180 VSVDEKSEFLMADIPGIIEGASEGKGLGISFLKHIERTKVLAFVLDASRLDLGIKEQYQR 239 Query: 258 ILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELATQCGQVPFEFSSITGHGIP 316 + EL ++ L K V L++ D V++ D +A+ C + E + G+ Sbjct: 240 LRLELEKFSPALANKPFGVLLNKCDVVENIDEMAKD------FCAFLNLEAQKLEAFGLE 293 Query: 317 QILECLHDKIFS 328 L LH + S Sbjct: 294 PYLGFLHPHLTS 305 >gi|160933796|ref|ZP_02081184.1| hypothetical protein CLOLEP_02657 [Clostridium leptum DSM 753] gi|156867673|gb|EDO61045.1| hypothetical protein CLOLEP_02657 [Clostridium leptum DSM 753] Length = 425 Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 138/333 (41%), Positives = 211/333 (63%), Gaps = 7/333 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F+D AK+ I++GDGG G +SFRREK++ GGPDGG GGRGG++ QA +NL+TL DFR Sbjct: 3 LLFVDIAKIRIKAGDGGNGAVSFRREKYVAAGGPDGGDGGRGGNIVFQADTNLSTLADFR 62 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDL-DQEGQRIILAP 119 YQ+ + AQ+GE G +G D+V+ VP+GT V + + +I DL D E + A Sbjct: 63 YQRKYTAQNGENGRGSRCNGKSAPDLVIRVPLGTVVKDAETGRIIADLSDYEPH--VAAK 120 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG+GN HF ++T Q P +A PGI G+ + L+LKL+AD+G++G PN GKST ++ V Sbjct: 121 GGKGGWGNIHFATATRQVPRFAKPGIPGEALEVTLELKLLADVGLVGFPNVGKSTLVSVV 180 Query: 180 TRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 + AKP IADY FTTL P LG+V G F++ADIPG+I+ A +G G+G +FL+H +R + Sbjct: 181 SEAKPVIADYHFTTLTPVLGVVHMGESSFVMADIPGLIEGAWEGVGLGHQFLRHVDRCRM 240 Query: 240 LLHI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+HI VS E + + ++ I EL+ +N L K+ +V ++ D + +D ++ E Sbjct: 241 LVHIVDVSGSEGRDPKEDFRVINQELAKFNPVLAKRPMLVAGNKCD-LATDEQIQEFKEF 299 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 G F + + + +L+ + + + ++ Sbjct: 300 VENQGYAFFPMMAAISYQVEPLLKKIQEMLSAL 332 >gi|87125336|ref|ZP_01081182.1| GTP1/OBG family:Hemolysin-type calcium-binding region [Synechococcus sp. RS9917] gi|86167105|gb|EAQ68366.1| GTP1/OBG family:Hemolysin-type calcium-binding region [Synechococcus sp. RS9917] Length = 329 Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 135/321 (42%), Positives = 210/321 (65%), Gaps = 1/321 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ +R+G GG G ++FRREK++ GGP GG GG GG+V ++A +NL TL+DF+ Sbjct: 1 MQFIDQARITVRAGRGGDGIVAFRREKYVPAGGPSGGDGGHGGNVILEADANLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F A G +G +GA G D+V+ VP GT+V L+ DL G+++++A G Sbjct: 61 YKRLFPAADGRRGGPNRCTGASGMDLVIRVPCGTEVRHLTTGILLGDLTDPGEQLVVAFG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S+ N+AP G G+E + L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GRGGLGNAHYLSNRNRAPEKCTEGRDGEEWPLQLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ + + ADIPG+I A QGAG+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRRPTGDGTVFADIPGLIAGAAQGAGLGHDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V E+ + + + EL+AY L ++ ++ L++++ +D + L Sbjct: 241 LIHLVDGGSEDPVSDLRVVEKELAAYGHGLVERPRLLVLNKLELLDEAGRDEQVMRLEQA 300 Query: 300 CGQVPFEFSSITGHGIPQILE 320 G+ S+ G G+ ++L+ Sbjct: 301 SGRPVLLISAAMGQGLDRLLD 321 >gi|162138551|ref|YP_377825.2| GTPase ObgE [Synechococcus sp. CC9902] gi|261277907|sp|Q3AV08|OBG_SYNS9 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 329 Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 138/327 (42%), Positives = 206/327 (62%), Gaps = 1/327 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ R G GG G +FRREK++ GGP GG GG GG V ++A SNL TL+DF+ Sbjct: 1 MQFIDQARISTRGGRGGDGIAAFRREKYVPAGGPSGGDGGHGGHVVLEADSNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F A G++G R+G G ++V+ VP GT+V L+ DL + G R++ A G Sbjct: 61 YKRLFAADDGKRGGPNKRTGVSGRELVIKVPCGTEVRHLTTGILLGDLIEPGTRLVAAFG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S+ N+AP G G+E + L+LKL+A++GIIGLPNAGKST +A ++ Sbjct: 121 GRGGLGNAHYLSNRNRAPEKFTEGRDGEEWPLQLELKLLAEVGIIGLPNAGKSTLIAVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ + + ADIPG+I A QGAG+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLIPNLGVVRRPSGDGTVFADIPGLIAGAAQGAGLGHDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V A ++ + + EL AY L + ++ L++ + V L +L Sbjct: 241 LIHLVDAGSDDPVEDLRVVEQELKAYGHGLVDRPRLLVLNKKELVQESDLPGVLADLENA 300 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKI 326 G+ S+ G + ++LE + +++ Sbjct: 301 SGRDVSCISAAMGTNLNELLENVWNEL 327 >gi|226360447|ref|YP_002778225.1| GTPase ObgE [Rhodococcus opacus B4] gi|226238932|dbj|BAH49280.1| GTP-binding protein Obg [Rhodococcus opacus B4] Length = 486 Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 134/327 (40%), Positives = 193/327 (59%), Gaps = 14/327 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++ +G GG G S REKF GGPDGG+GGRGGDV ++ N++TL+DF + Sbjct: 3 RFIDRVVLHVSAGKGGNGCASVHREKFKPLGGPDGGNGGRGGDVVLEVDGNVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H KA +G++GM NR GA+G+D++L VP GT V +EDG ++ DL G R A GG Sbjct: 63 HPHAKATNGKQGMGSNRDGAQGDDLILKVPDGTVVLDEDG-RILADLIGVGTRFEAAQGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G E+ + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 RGGLGNAALSSKARKAPGFALLGEDGVERELVLELKSVADVGLVGFPSAGKSSLVSVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A G G+G FL+H ER VL Sbjct: 182 AKPKIADYPFTTLVPNLGVVSSGDTTFTVADVPGLIPGASDGRGLGLDFLRHLERCAVLA 241 Query: 242 HIVSALE----ENVQAAYQCILDELSAYN---------SELRKKIEIVGLSQIDTVDSDT 288 H+V + + + EL+AY +L + IV L++ D ++ Sbjct: 242 HVVDCATLDPGRDPVSDIDALEAELAAYKGALSGDTGLGDLADRPRIVILNKADVPEAAE 301 Query: 289 LARKKNELATQCGQVPFEFSSITGHGI 315 LA G F S+++ G+ Sbjct: 302 LAEMVTPDLEARGWPIFTISAVSREGL 328 >gi|87308879|ref|ZP_01091018.1| GTP-binding protein OBG [Blastopirellula marina DSM 3645] gi|87288590|gb|EAQ80485.1| GTP-binding protein OBG [Blastopirellula marina DSM 3645] Length = 335 Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 134/332 (40%), Positives = 208/332 (62%), Gaps = 7/332 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D + + G GG G +SFRREK++ GGPDGG GG G ++ + A +++L+ + Sbjct: 2 FVDRVVIEVEGGSGGDGCMSFRREKYVPNGGPDGGDGGSGSNIIMVAEDGVDSLMAMSHI 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H++ Q G G NR+G EDV++ VP+GT V E D ++ DL+ G+++I A GG+ Sbjct: 62 KHWRGQRGNNGGPANRTGKSAEDVIIKVPLGTVVIEADAGFVMKDLNVAGEQMIAARGGS 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK+STN+AP + PG G+ + + L+LK IADIG+IG PNAGKST L+ ++RA Sbjct: 122 GGRGNLSFKNSTNRAPRQSTPGGKGERRKLILELKSIADIGLIGKPNAGKSTLLSRLSRA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IADYPFTT +PNLG V+ Y + F+LADIPG+I+ A +G G+G FL+H ER +L+ Sbjct: 182 RPEIADYPFTTKFPNLGQVQIDYDRTFVLADIPGLIEGASEGVGLGHEFLRHVERAGILI 241 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V + YQ I EL Y+++L + EI+ +++ + + + +++LA Sbjct: 242 HLVEPAPVDGTDPIENYQSIRHELMQYDADLAARPEILCVTKAELPEGKEV---RDKLAE 298 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G S++TG + +L D++ R Sbjct: 299 ITGGEVLLISAVTGENLNVLLNRAGDELDRAR 330 >gi|300788541|ref|YP_003768832.1| GTP-binding protein Obg [Amycolatopsis mediterranei U32] gi|299798055|gb|ADJ48430.1| GTP-binding protein Obg [Amycolatopsis mediterranei U32] Length = 485 Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 130/297 (43%), Positives = 188/297 (63%), Gaps = 9/297 (3%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D A +++ +GDGG G S REKF GGPDGG+GG GGDV + N++TL+DF + Sbjct: 4 RFVDRAVIHLTAGDGGNGCASVHREKFKPLGGPDGGNGGNGGDVLLVVDPNVHTLLDFHF 63 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H KA G+ G NR+GA GE +V+ VP GT VF EDG ++ DL G + A GG Sbjct: 64 RPHAKAGSGKMGQGGNRAGAAGETLVMKVPSGTVVFTEDG-EMVADLIGPGTTFVAAQGG 122 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+ + + L+L+ +AD+G++G P+AGKS+ ++ ++ Sbjct: 123 RGGLGNAALSSKARKAPGFALLGEPGETRNLVLELRSVADVGLLGFPSAGKSSLISVLSA 182 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG++ G F +AD+PG+I A +G G+G FL+H ER VL+ Sbjct: 183 AKPKIADYPFTTLVPNLGVITGGDTVFTMADVPGLIPGASEGKGLGLDFLRHIERCAVLV 242 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNSELRKKIE----IVGLSQIDTVDSDTLA 290 H+V + LE + + + EL+ Y L K+E +V L++ID ++ LA Sbjct: 243 HVVDCATLEPGRDPLSDVDALEAELAKYTPSLGGKLEERPRVVVLNKIDVPEAAELA 299 >gi|290580734|ref|YP_003485126.1| putative GTP-binding protein [Streptococcus mutans NN2025] gi|254997633|dbj|BAH88234.1| putative GTP-binding protein [Streptococcus mutans NN2025] Length = 436 Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 202/329 (61%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AKV +++G GG G ++FRREK++ GGP GG GGRGGDV L TL+DFRY Sbjct: 4 FLDTAKVSVKAGRGGDGMVAFRREKYVANGGPWGGDGGRGGDVIFVVNEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GEKGM + G E++ ++VP GT V + +I DL + GQ I+A GG Sbjct: 64 RHFKAKAGEKGMTKGMHGRGAENLYVSVPQGTTVRDAQTGKVIADLVKNGQEFIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G G+E+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPRNPAPEISENGEPGEERELALELKILADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 H++ SA E + Y I EL YN L ++ +I+ +++D ++ L + K +L Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELETYNLRLLERPQIIVANKMDMPQAAENLEQFKEKLD 303 Query: 298 TQCGQVP-----FEFSSITGHGIPQILEC 321 G+ F S I G+ +L+ Sbjct: 304 ANYGEFDDKPQIFPISGIAHQGLDALLDA 332 >gi|161511505|ref|NP_853232.2| GTPase ObgE [Mycoplasma gallisepticum str. R(low)] gi|261266896|sp|Q7NB30|OBG_MYCGA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|284812124|gb|AAP56800.2| GTPase ObgE [Mycoplasma gallisepticum str. R(low)] gi|284930717|gb|ADC30656.1| GTPase ObgE [Mycoplasma gallisepticum str. R(high)] Length = 434 Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 133/332 (40%), Positives = 205/332 (61%), Gaps = 8/332 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D ++ + +G+GG G I++RRE + GGP GGSGG+GG++ + A N +TL+ + Sbjct: 1 MQFIDRCQIKLIAGNGGDGIIAWRREAHYDKGGPAGGSGGKGGNIILVADHNQSTLLSLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A +G+ G SG G D + VP+GT V++E +I DL ++ Q I+ G Sbjct: 61 YSKIIRASNGDNGKPDLSSGQNGMDKYVKVPIGTTVYDEQTNEVIVDLIRDKQEYIICHG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FKSST +AP G G+EK + L+LK +A++GI+G PNAGKST ++ ++ Sbjct: 121 GKGGRGNAAFKSSTLRAPNLYELGDEGEEKTVRLELKYLANVGIVGYPNAGKSTLISKLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIA+Y FTTL P LGIV+ K + ADIPG+I+NA +G G+G FL+H ER VL Sbjct: 181 NAKPKIANYQFTTLVPILGIVENNDKRLVFADIPGLIENASEGYGLGHDFLRHVERCEVL 240 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +H++S ++V AY+ I+ EL Y+ L K +V +++D + + N+L Sbjct: 241 IHLISMNPLDHDDVIDAYEKIMTELRKYSQLLVNKKMLVVANKMDV---EGASENFNKLR 297 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 + + + SSI+ I + L D++F + Sbjct: 298 SYLAKKGIDISSIS--AINGDVNNLVDRVFDL 327 >gi|225551870|ref|ZP_03772813.1| GTP-binding protein Obg/CgtA [Borrelia sp. SV1] gi|225371665|gb|EEH01092.1| GTP-binding protein Obg/CgtA [Borrelia sp. SV1] Length = 328 Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 120/280 (42%), Positives = 179/280 (63%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + SG+GG+G +SF REKF GGPDGG+GG GG V + NL+TL ++ Sbjct: 4 FKDSVNITVVSGNGGSGCVSFLREKFNAKGGPDGGNGGSGGSVIFKVRENLSTLSFYKNG 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 A++G+ GM RSGA G+D+ L VP T+V+ E+ +L+ L ++ GG Sbjct: 64 HVLCAENGKPGMGFKRSGANGKDLTLFVPPNTEVYNENDGTLLYRLKNLNDEFVVLKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FK+S +AP +A PG G + L+L L+ADIG++GLPNAGKS+ L +T A Sbjct: 124 GGLGNWNFKTSARRAPRFAQPGESGNSLSVRLELFLVADIGLVGLPNAGKSSLLNRITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 K ++A+YPFTT P+LG+++ Y + I+ADIPGIIK A G G+G +FLKH +T +L Sbjct: 184 KSRVANYPFTTKIPHLGMLRRSYDDLIIADIPGIIKGASFGVGLGTKFLKHIAKTKILAL 243 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 ++ E N +Y +L+EL +Y+ +L K +I+ +++D Sbjct: 244 VIDVSEANFLESYNILLNELKSYSHKLFNKKKIIIANKLD 283 >gi|111018321|ref|YP_701293.1| GTPase ObgE [Rhodococcus jostii RHA1] gi|123046578|sp|Q0SH51|OBG_RHOSR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|110817851|gb|ABG93135.1| probable GTP-binding protein, GTP1/Obg family protein [Rhodococcus jostii RHA1] Length = 486 Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 134/327 (40%), Positives = 193/327 (59%), Gaps = 14/327 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++ +G GG G S REKF GGPDGG+GGRGGDV ++ N++TL+DF + Sbjct: 3 RFIDRVVLHVSAGKGGNGCASVHREKFKPLGGPDGGNGGRGGDVVLEVDGNVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H KA +G++GM NR GA+G+D++L VP GT V +EDG ++ DL G R A GG Sbjct: 63 HPHAKATNGKQGMGSNRDGAQGDDLILRVPDGTVVLDEDG-RILADLIGVGTRFEAAQGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G E+ + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 RGGLGNAALSSKARKAPGFALLGEDGVERELVLELKSVADVGLVGFPSAGKSSLVSVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A G G+G FL+H ER VL Sbjct: 182 AKPKIADYPFTTLVPNLGVVSSGDTTFTVADVPGLIPGASDGRGLGLDFLRHLERCAVLA 241 Query: 242 HIVSALE----ENVQAAYQCILDELSAYN---------SELRKKIEIVGLSQIDTVDSDT 288 H+V + + + EL+AY +L + IV L++ D ++ Sbjct: 242 HVVDCATLDPGRDPISDIDALEAELAAYKGALSGDAGLGDLADRPRIVILNKADVPEAAE 301 Query: 289 LARKKNELATQCGQVPFEFSSITGHGI 315 LA G F S+++ G+ Sbjct: 302 LAEMVTPDLEARGWPVFTISAVSREGL 328 >gi|326330739|ref|ZP_08197043.1| GTP-binding protein [Nocardioidaceae bacterium Broad-1] gi|325951580|gb|EGD43616.1| GTP-binding protein [Nocardioidaceae bacterium Broad-1] Length = 520 Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 132/334 (39%), Positives = 201/334 (60%), Gaps = 6/334 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ +G GG G S REKF GGPDGG+GG GG + ++ ++ TLID+ + Sbjct: 6 FVDRVTLHVEAGRGGHGVASVHREKFKPLGGPDGGNGGPGGSIILRVDPDVTTLIDYHHS 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 KA +G +G +++GA GED+VL VP GT V + G +++ DL G +++A GG Sbjct: 66 PKRKAPNGGQGAGDHKNGAHGEDMVLPVPDGTVVTDMRG-NVLADLVGPGSELVVAEGGR 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA SS +AP +A G G+ + I L+LK++ADIG++G P+AGKS+ +A+++RA Sbjct: 125 GGLGNAALASSKRKAPGFALLGEPGESREIGLELKVVADIGLVGFPSAGKSSLIAAISRA 184 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+VK G F +AD+PG+I+ A G G+G FL+H ER L+H Sbjct: 185 RPKIADYPFTTLVPNLGVVKGGEITFTVADVPGLIEGAADGRGLGHEFLRHIERCAALVH 244 Query: 243 IVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ N I +ELS + L + +V L+++D D +A Sbjct: 245 VIDTASIEPGRNPIDDLDVIENELSRHGG-LEDRPRLVALNKVDVPDGREIAEMTIGEFE 303 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + G FE S+ +G G Q++ + + + + R E Sbjct: 304 KRGLKVFEISAASGEGTQQLIYAMAELVAASRKE 337 >gi|312865969|ref|ZP_07726190.1| Obg family GTPase CgtA [Streptococcus downei F0415] gi|311098373|gb|EFQ56596.1| Obg family GTPase CgtA [Streptococcus downei F0415] Length = 435 Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 140/348 (40%), Positives = 212/348 (60%), Gaps = 15/348 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GG GG GG+GG V + L TL+DFRY Sbjct: 2 FLDTAKINVKAGRGGDGMVAFRREKYVPNGGSWGGDGGKGGSVIFKVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F+A++GEKGM + G ED+++ +P GT V + + ++ DL + GQ + A GG Sbjct: 62 RKFRAKNGEKGMTKGMHGRGAEDLIVAIPPGTTVRDAETGKVLTDLVENGQEFVAAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPRNPAPEISENGEPGQERDLQLELKILADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PN+G+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNIGMVRTKSGESFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I EL YN L ++ +I+ +++D ++ + L K ++A Sbjct: 242 HVIDMSAAEGRDPYEDYLSINKELETYNLRLLERPQIIVANKMDMPEAKENLKVFKEKMA 301 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILEC---LHDKI--FSIRGENEF 335 + +P F SS+ G+ +LE L DK F I E+E Sbjct: 302 ADYDEFDDLPMIFPISSLAHRGLENLLEATAELLDKTDEFLIYSEDEL 349 >gi|81845300|sp|Q8DUU2|OBG_STRMU RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|24377174|gb|AAN58519.1|AE014921_4 putative GTP-binding protein [Streptococcus mutans UA159] Length = 436 Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 202/329 (61%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AKV +++G GG G ++FRREK++ GGP GG GGRGGDV L TL+DFRY Sbjct: 4 FLDTAKVSVKAGRGGDGMVAFRREKYVANGGPWGGDGGRGGDVIFVVNEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GEKGM + G E++ ++VP GT V + +I DL + GQ I+A GG Sbjct: 64 RHFKAKAGEKGMTKGMHGRGAENLYVSVPQGTTVRDAQTGKVIADLVKNGQEFIVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G G+E+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 124 GGRGNIRFATPRNPAPEISENGEPGEERELALELKILADVGLVGFPSVGKSTLLSVITAA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 H++ SA E + Y I EL YN L ++ +I+ +++D ++ L + K +L Sbjct: 244 HVIDMSASEGRDPYEDYLAINKELETYNLRLLERPQIIVANKMDMPQAAENLEQFKEKLD 303 Query: 298 TQCGQVP-----FEFSSITGHGIPQILEC 321 G+ F S I G+ +L+ Sbjct: 304 ANYGEFDDKPQIFPISGIAHQGLDALLDA 332 >gi|320529184|ref|ZP_08030276.1| Obg family GTPase CgtA [Selenomonas artemidis F0399] gi|320138814|gb|EFW30704.1| Obg family GTPase CgtA [Selenomonas artemidis F0399] Length = 427 Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 133/324 (41%), Positives = 206/324 (63%), Gaps = 4/324 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D A + +++GDGG G +FR EKF+ GGP GG GGRGGDV +A NLNTL+ FR Sbjct: 1 MQFIDRAHITVKAGDGGHGKSAFRHEKFMPKGGPSGGDGGRGGDVVFRADRNLNTLLSFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A++GE G +N+ G + + VP GT V +E ++ DL + ++ G Sbjct: 61 FHRKFTAKNGENGEYKNQYGRNAAPLYVNVPPGTIVTDETTGEVLADLAEIDTEAVIVRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F ++ N+AP +A G G+ + + L+LKL+AD+G++G P+ GKS+ +AS + Sbjct: 121 GRGGRGNAKFANAANRAPTFAEFGEPGESRKLVLELKLLADVGLVGYPSVGKSSLVASCS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P+IADY FTTL P LG+V+ Y K F++ADIPG+I+ A G G+G FL+H ERT + Sbjct: 181 AARPEIADYHFTTLTPVLGVVQTDYEKSFVMADIPGLIEGAADGVGLGHDFLRHVERTRL 240 Query: 240 LLHIVSA--LE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 +LHIV A +E + Y I EL+ Y+ ++ ++ +I+ ++ID + + EL Sbjct: 241 ILHIVDASGIEGRDPVEDYHKINAELARYSEKIARRTQILVANKIDLPSAAEHLPRLREL 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILE 320 A + G FE S+ T G+ ++++ Sbjct: 301 AEREGLEFFEISAATRAGVQELID 324 >gi|168334005|ref|ZP_02692229.1| GTP-binding protein Obg/CgtA [Epulopiscium sp. 'N.t. morphotype B'] Length = 423 Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 133/293 (45%), Positives = 192/293 (65%), Gaps = 6/293 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+++RSG GG G +SFRREK++ GGPDGG GG GGD+ Q S +NTL++F++ Sbjct: 2 FVDHVKIFVRSGRGGDGHVSFRREKYVPNGGPDGGDGGTGGDIIFQVDSGINTLLNFKHI 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA GE G K+ G G D V+ VP GT + E + +I D+ + Q+ I+ GG Sbjct: 62 RQYKAGDGEPGAKKRCHGKDGLDKVIRVPKGTIIREAESQKIIADMYLDDQQEIIFKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + T QAP YA G +E + L+LK++AD+G++G PN GKST L+ V+ A Sbjct: 122 GGKGNQHFATPTRQAPKYAEKGRDAKEYWVTLELKMLADVGLVGFPNVGKSTLLSMVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADY FTTL PNLG+V + K+F++ADIPGII+ A G G+G FL+H ERT V++ Sbjct: 182 QPKIADYHFTTLSPNLGVVTNRFGKQFVMADIPGIIEGASDGVGLGFNFLRHIERTKVIV 241 Query: 242 HIVSAL---EENVQAAYQCILDELSAYNSE-LRKKIEIVGLSQIDTVDSDTLA 290 H+V A + ++ I+ EL YN + L K +I+ ++ID + S+ +A Sbjct: 242 HVVDAAGTEGRDPKSDILTIIKELDKYNPQILETKPQIIAANKID-ISSEYIA 293 >gi|293553440|ref|ZP_06674068.1| Obg family GTPase CgtA [Enterococcus faecium E1039] gi|291602317|gb|EFF32541.1| Obg family GTPase CgtA [Enterococcus faecium E1039] Length = 437 Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 139/333 (41%), Positives = 204/333 (61%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 4 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVILIVDEGLRTLMDFRFN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GE GM + G +D + VP GT V + + +L+ DL + GQ +++A GG Sbjct: 64 RHFKAQPGENGMSKGMHGRGSKDTYVKVPQGTTVRDAETGALLGDLIENGQTLVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 124 GGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 RPKIGAYHFTTLVPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I ELS YN L ++ +I+ +++D D+ + L + K +L Sbjct: 244 HVIDMSGMEGRDPYEDYLAINKELSTYNLRLLERPQIIVANKMDMPDAQENLVKFKEQLN 303 Query: 298 TQ-----CGQVP-FEFSSITGHGIPQILECLHD 324 + +P F S +T G+ +L D Sbjct: 304 KEKEDEFADDIPVFPISGVTRQGLDALLNATAD 336 >gi|313896278|ref|ZP_07829831.1| Obg family GTPase CgtA [Selenomonas sp. oral taxon 137 str. F0430] gi|312975077|gb|EFR40539.1| Obg family GTPase CgtA [Selenomonas sp. oral taxon 137 str. F0430] Length = 427 Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 133/324 (41%), Positives = 206/324 (63%), Gaps = 4/324 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D A + +++GDGG G +FR EKF+ GGP GG GGRGGDV +A NLNTL+ FR Sbjct: 1 MQFIDRAHITVKAGDGGHGKSAFRHEKFMPKGGPSGGDGGRGGDVVFRADRNLNTLLSFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A++GE G +N+ G + + VP GT V +E ++ DL + ++ G Sbjct: 61 FHRKFTAKNGENGEYKNQYGRNAAPLYVNVPPGTIVTDETTGEVLADLAEIDTEAVIVRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F ++ N+AP +A G G+ + + L+LKL+AD+G++G P+ GKS+ +AS + Sbjct: 121 GRGGRGNAKFANAANRAPTFAEFGEPGESRKLVLELKLLADVGLVGYPSVGKSSLVASCS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P+IADY FTTL P LG+V+ Y K F++ADIPG+I+ A G G+G FL+H ERT + Sbjct: 181 AARPEIADYHFTTLTPVLGVVQTDYEKSFVMADIPGLIEGAADGVGLGHDFLRHVERTRL 240 Query: 240 LLHIVSA--LE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 +LHIV A +E + Y I EL+ Y+ ++ ++ +I+ ++ID + + EL Sbjct: 241 ILHIVDASGIEGRDPVEDYHKINAELARYSEKIARRTQILVANKIDLPSAAEHLPRLREL 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILE 320 A + G FE S+ T G+ ++++ Sbjct: 301 AEREGIEFFEISAATRAGVQELID 324 >gi|42560974|ref|NP_975425.1| GTPase ObgE [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81829388|sp|Q6MTG9|OBG_MYCMS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|42492471|emb|CAE77067.1| GTP-binding protein Obg [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320546|gb|ADK69189.1| Obg family GTPase CgtA [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 433 Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 125/287 (43%), Positives = 189/287 (65%), Gaps = 5/287 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D A + I++G GG G +SF F+ GGP+GG GG GG V+ Q ++L+D + Sbjct: 1 MKFVDSADLIIKAGKGGDGAVSFLHALFVPNGGPNGGDGGDGGSVYFQGDEGKHSLLDLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ + AQ G KG +N GAKGED ++ VPVGT ++++ +++ D+++ + +++A G Sbjct: 61 LQKKYSAQDGFKGDIKNMHGAKGEDKIIKVPVGTILYDKKTNNILADINENNKLVLIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F +S N+AP G LGQE I +LK++AD+G +GLPNAGKST L +++ Sbjct: 121 GKGGKGNARFANSRNKAPTIFEAGELGQEFEIRAELKVLADVGFVGLPNAGKSTLLRAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +KP +ADYPFTT+ P LG+ + + FI+AD+PG+I+ A G G+G +FLKH ER V Sbjct: 181 NSKPVVADYPFTTITPQLGVARTKNNDTFIVADLPGLIQGASLGKGLGHQFLKHIERCLV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 + HI+ A E++ Y+ I +EL YN L K+ EI+ L+++D Sbjct: 241 ICHIIDASGNFGSEDIIKNYELIRNELKTYNLNLEKRAEIIVLNKMD 287 >gi|269123096|ref|YP_003305673.1| GTP-binding protein Obg/CgtA [Streptobacillus moniliformis DSM 12112] gi|268314422|gb|ACZ00796.1| GTP-binding protein Obg/CgtA [Streptobacillus moniliformis DSM 12112] Length = 432 Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 141/327 (43%), Positives = 212/327 (64%), Gaps = 11/327 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE+ + I+SG GG G +FRREKF++FGGPDGG GG+GGD+ A N+NTL+DF+ Sbjct: 2 FIDESIITIKSGKGGDGAATFRREKFVQFGGPDGGDGGKGGDIIFIADPNINTLVDFKTV 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F+A+ G++G GA G++ ++ VPVGT + + + L+ DLD + I+L GG+ Sbjct: 62 KMFEAEDGQRGSGARCKGASGKNCIIKVPVGTMIRDYETDKLLVDLDIPNEEIVLLKGGD 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSS +AP A G G E I L+LKL+AD+ ++G P+ GKS+F+ V+ A Sbjct: 122 GGRGNIHFKSSIRKAPKIAESGREGMELKIKLELKLLADVALVGYPSVGKSSFINKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K+A+Y FTTL P LG+V+ +E F++ADIPG+I+ AH+G G+GDRFLKH +R ++ Sbjct: 182 NSKVAEYHFTTLKPKLGVVRMSDEESFVIADIPGLIEGAHEGVGLGDRFLKHIQRCKTIV 241 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKKN 294 HI+ S +E E ++ ++ I +EL ++ L KK +IV +++D V D + KN Sbjct: 242 HIIDFSGIEGREPIE-DFEKINNELFKFSERLSKKEQIVFANKLDMVFDDREDKIKEFKN 300 Query: 295 ELATQ-CGQVPFEFSS-ITGHGIPQIL 319 EL + + F S ITG + ++L Sbjct: 301 ELIKRGIREENIVFGSIITGENLKELL 327 >gi|331703433|ref|YP_004400120.1| GTP binding protein Obg [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801988|emb|CBW54142.1| GTP binding protein Obg [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 433 Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 125/287 (43%), Positives = 189/287 (65%), Gaps = 5/287 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D A + I++G GG G +SF F+ GGP+GG GG GG ++ ++L+D + Sbjct: 1 MKFVDSADLIIKAGKGGDGAVSFLHALFVPNGGPNGGDGGDGGSIYFLGDEGKHSLLDLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ + AQ G KG +N GAKGED ++ VPVGT ++++ +++ D+++ + +++A G Sbjct: 61 LQKKYSAQDGFKGDIKNMHGAKGEDKIIKVPVGTILYDKKTNTILADINENNKLVLIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F +S N+AP G LGQE I +LK++AD+G +GLPNAGKST L +++ Sbjct: 121 GKGGKGNARFANSRNKAPTIFEAGELGQEFEIRAELKVLADVGFVGLPNAGKSTLLRAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +KP +ADYPFTT+ P LG+ + + FI+AD+PG+I+ A G G+G +FLKH ER V Sbjct: 181 NSKPVVADYPFTTITPQLGVARTKNNDTFIVADLPGLIQGASLGKGLGHQFLKHIERCLV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 + HI+ A E++ Y+ I DEL AYN L K+ E++ L++ID Sbjct: 241 ICHIIDASGNFGSEDIIKNYELIRDELKAYNLNLEKRPEVIVLNKID 287 >gi|83319638|ref|YP_424504.1| GTPase ObgE [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|123535660|sp|Q2SRV9|OBG_MYCCT RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|83283524|gb|ABC01456.1| Spo0B-associated GTP-binding protein, putative [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 433 Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 133/338 (39%), Positives = 207/338 (61%), Gaps = 19/338 (5%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D A + I++G GG G +SF F+ GGP+GG GG GG V+ Q ++L+D + Sbjct: 1 MKFVDSADLIIKAGKGGDGAVSFLHALFVPNGGPNGGDGGDGGSVYFQGDEGKHSLLDLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ + AQ G KG +N GA GED ++ VPVGT ++++ +++ D+++ + +++A G Sbjct: 61 LQKKYSAQDGFKGDIKNMHGANGEDKIIKVPVGTILYDKKTNTILADINENNKLVLIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F +S N+AP G LGQE I +LK++AD+G +GLPNAGKST L +++ Sbjct: 121 GKGGKGNARFANSRNKAPTIFEAGELGQEFEIRAELKVLADVGFVGLPNAGKSTLLRAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +KP +ADYPFTT+ P LG+ + + FI+AD+PG+I+ A G G+G +FLKH ER V Sbjct: 181 NSKPVVADYPFTTINPQLGVARTKNNDTFIVADLPGLIQGASLGKGLGHQFLKHIERCLV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGL-------SQIDTVDSDT 288 + HI+ A E++ Y+ I +EL AYN L K+ EI+ L +Q++ +D Sbjct: 241 ICHIIDASGNFGSEDIIKNYELIRNELKAYNLNLEKRAEIIVLNKMDLDEAQLNLLDEKI 300 Query: 289 LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + KN+ Q S + I Q+L +++++ Sbjct: 301 INYFKNKKVVQI-------SGLKKENIDQLLFMIYEEL 331 >gi|161486823|ref|NP_721213.2| GTPase ObgE [Streptococcus mutans UA159] Length = 434 Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 139/329 (42%), Positives = 202/329 (61%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AKV +++G GG G ++FRREK++ GGP GG GGRGGDV L TL+DFRY Sbjct: 2 FLDTAKVSVKAGRGGDGMVAFRREKYVANGGPWGGDGGRGGDVIFVVNEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GEKGM + G E++ ++VP GT V + +I DL + GQ I+A GG Sbjct: 62 RHFKAKAGEKGMTKGMHGRGAENLYVSVPQGTTVRDAQTGKVIADLVKNGQEFIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP + G G+E+ + L+LK++AD+G++G P+ GKST L+ +T A Sbjct: 122 GGRGNIRFATPRNPAPEISENGEPGEERELALELKILADVGLVGFPSVGKSTLLSVITAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTKSGDSFAVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELA 297 H++ SA E + Y I EL YN L ++ +I+ +++D ++ L + K +L Sbjct: 242 HVIDMSASEGRDPYEDYLAINKELETYNLRLLERPQIIVANKMDMPQAAENLEQFKEKLD 301 Query: 298 TQCGQVP-----FEFSSITGHGIPQILEC 321 G+ F S I G+ +L+ Sbjct: 302 ANYGEFDDKPQIFPISGIAHQGLDALLDA 330 >gi|326382842|ref|ZP_08204532.1| GTPase CgtA [Gordonia neofelifaecis NRRL B-59395] gi|326198432|gb|EGD55616.1| GTPase CgtA [Gordonia neofelifaecis NRRL B-59395] Length = 506 Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 139/348 (39%), Positives = 205/348 (58%), Gaps = 18/348 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ + +G+GG G S REKF GGPDGG+GGRGGDV + ++TL+DF + Sbjct: 3 RFVDRVQIEVVAGNGGHGCTSVHREKFKPLGGPDGGNGGRGGDVRLIVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H +A +G GM NR+GA G+D++L VP GT V + DG ++ DL G + A GG Sbjct: 63 RPHARATNGRPGMGGNRNGAAGDDLILKVPDGTVVMDADG-EIVADLVGPGTEFVAAQGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G E+ + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 RGGLGNAALASRARRAPGFALLGEPGDERALMLELKSVADVGLVGFPSAGKSSLVSVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G + F +AD+PG+I A QG G+G FL+H ER VL Sbjct: 182 AKPKIADYPFTTLAPNLGVVTAGAEVFTVADVPGLIPGASQGRGLGLDFLRHLERCAVLA 241 Query: 242 HIV---------------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 H+V ALE + AAYQ LD + +L + +V L+++D ++ Sbjct: 242 HVVDCATLEPGRDPVSDIDALEAEL-AAYQPALDADHSLG-DLATRPRVVILNKVDIPEA 299 Query: 287 DTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 LA + G F S++ G+ ++ L + + R E+E Sbjct: 300 AELADLVEADVAERGWPVFRISALAHKGLSELTFALAEMVAKYRTEHE 347 >gi|116072697|ref|ZP_01469963.1| Small GTP-binding protein domain [Synechococcus sp. BL107] gi|116064584|gb|EAU70344.1| Small GTP-binding protein domain [Synechococcus sp. BL107] Length = 329 Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 138/321 (42%), Positives = 201/321 (62%), Gaps = 1/321 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ R G GG G +FRREK++ GGP GG GG GG V ++A SNL TL+DF+ Sbjct: 1 MQFIDQARISTRGGRGGDGIAAFRREKYVPAGGPSGGDGGHGGHVVLEADSNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F A G++G R+G G ++V+ VP GT+V L+ DL + G R++ A G Sbjct: 61 YKRLFAADDGKRGGPNKRTGVSGRELVIKVPCGTEVRHLTTGILLGDLIEPGTRLVAAFG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S+ N+AP G G+E + L+LKL+A++GIIGLPNAGKST +A ++ Sbjct: 121 GRGGLGNAHYLSNRNRAPEKFTEGRDGEEWPLQLELKLLAEVGIIGLPNAGKSTLIAVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ + + ADIPG+I A QGAG+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLIPNLGVVRRPSGDGTVFADIPGLIAGAAQGAGLGHDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V A E+ + + EL AY L + ++ L++ + V L L Sbjct: 241 LIHLVDAGSEDPVEDLRVVEQELKAYGHGLVDRPRLLVLNKKELVQESDLPDVLANLENA 300 Query: 300 CGQVPFEFSSITGHGIPQILE 320 G+ S+ G + ++L+ Sbjct: 301 SGRNVSCISAAMGTNLNELLD 321 >gi|301629489|ref|XP_002943872.1| PREDICTED: hypothetical protein LOC100491309 [Xenopus (Silurana) tropicalis] Length = 943 Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 112/277 (40%), Positives = 185/277 (66%), Gaps = 11/277 (3%) Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H K GM + GA G+D++L +PVGT + + ++ +L G+R+++A GG+ Sbjct: 650 KHDKXXXXGHGMGSDMFGAAGDDIILKMPVGTIITDAQAGQVLYELLAPGERVMIAKGGD 709 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GGFGN FKS+ N+AP PG G+ K + L+LK++AD+G++G+PNAGKSTF+A+V+ A Sbjct: 710 GGFGNLRFKSAINRAPRQKTPGWPGEHKSLKLELKVLADVGLLGMPNAGKSTFIAAVSNA 769 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADYPFTTL+PNLG+V+ G ++ F++ADIPG+I+ A +GAG+G +FL+H +RT +LL Sbjct: 770 RPKIADYPFTTLHPNLGVVRVGPEQSFVVADIPGLIEGASEGAGLGHQFLRHLQRTRLLL 829 Query: 242 HIV------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKN 294 H+V A++ QA + I+ EL Y+++L K + L+++D V + + +A+ KN Sbjct: 830 HVVDLAPFDDAVDPVAQA--RAIVGELKKYDAQLYDKPRWLVLNKLDMVPAQERVAKVKN 887 Query: 295 ELATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 + Q P FE S++T G +++ ++ + ++ Sbjct: 888 FVKRFKWQGPVFEISALTREGCEPLIKAIYQHVHDLQ 924 >gi|227512146|ref|ZP_03942195.1| GTPase ObgE [Lactobacillus buchneri ATCC 11577] gi|227084540|gb|EEI19852.1| GTPase ObgE [Lactobacillus buchneri ATCC 11577] Length = 436 Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 134/328 (40%), Positives = 213/328 (64%), Gaps = 12/328 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G+GG G ++FRREKF+ GGP GG GGRGG + + S +NTL+DFRY Sbjct: 2 FVDQVKIDVQAGNGGNGIVAFRREKFVPNGGPAGGDGGRGGSIIFKVDSGMNTLMDFRYH 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++G G ++ +G +++++ VP GT V + +I DL + Q + +A GG Sbjct: 62 RKFKAKNGGDGGNKSMTGKSADNLIVPVPEGTTVTDTTTGEVIGDLLKPDQELTVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S+TN AP A G GQ + L+L+++AD+G++G P+AGKST L+ +T A Sbjct: 122 GGRGNIHFASATNPAPEIAENGEPGQAVSLSLELRVLADVGLVGFPSAGKSTLLSVITSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V+ + ++F +AD+PG+++ A +G G+G +FL+H ERT V+L Sbjct: 182 KPKIAGYHFTTLVPNLGMVRLDDGRDFAVADLPGLVEGASKGVGLGFQFLRHVERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H+V S +E + Y I EL Y+ ++ K+ +IV +++D ++ D L K++L Sbjct: 242 HLVDMSGVEGRDPYDDYLAINKELVEYDPDILKRPQIVVATKMDLPNAKDNLQIFKDKLT 301 Query: 298 ------TQCGQVPFEFSSITGHGIPQIL 319 T+ +V SS+T G+ +++ Sbjct: 302 SGHSVDTELPEV-LAISSVTHAGLSELI 328 >gi|284931377|gb|ADC31315.1| GTPase ObgE [Mycoplasma gallisepticum str. F] Length = 434 Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 133/332 (40%), Positives = 205/332 (61%), Gaps = 8/332 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D ++ + +G+GG G I++RRE + GGP GGSGG+GG++ + A N +TL+ + Sbjct: 1 MQFIDRCQIKLIAGNGGDGIIAWRREAHYDKGGPAGGSGGKGGNIILVADHNQSTLLSLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +A +G+ G SG G D + VP+GT V++E +I DL ++ Q I+ G Sbjct: 61 YSKIIRASNGDNGKPDLSSGQNGMDKYVKVPIGTTVYDEQTNEVIVDLIRDKQEYIICHG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FKSST +AP G G+EK + L+LK +A++GI+G PNAGKST ++ ++ Sbjct: 121 GKGGRGNAAFKSSTLRAPNLYELGDEGEEKAVRLELKYLANVGIVGYPNAGKSTLISKLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIA+Y FTTL P LGIV+ K + ADIPG+I+NA +G G+G FL+H ER VL Sbjct: 181 NAKPKIANYQFTTLVPILGIVENNDKRLVFADIPGLIENASEGYGLGHDFLRHVERCEVL 240 Query: 241 LHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +H++S ++V AY+ I+ EL Y+ L K +V +++D + + N+L Sbjct: 241 IHLISMNPLDHDDVIDAYEKIMTELRKYSQLLVNKKMLVVANKMDV---EGASENFNKLR 297 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 + + + SSI+ I + L D++F + Sbjct: 298 SYLAKKGIDISSIS--AINGDVNNLVDRVFDL 327 >gi|227509457|ref|ZP_03939506.1| GTP-binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191169|gb|EEI71236.1| GTP-binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 436 Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 134/328 (40%), Positives = 213/328 (64%), Gaps = 12/328 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++G+GG G ++FRREKF+ GGP GG GGRGG + + S +NTL+DFRY Sbjct: 2 FVDQVKIDVQAGNGGNGIVAFRREKFVPNGGPAGGDGGRGGSIIFKVDSGMNTLMDFRYH 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA++G G ++ +G +++++ VP GT V + +I DL + Q + +A GG Sbjct: 62 RKFKAKNGGDGGNKSMTGKSADNLIVPVPEGTTVTDTTTGEVIGDLLKPDQELTVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF S+TN AP A G GQ + L+L+++AD+G++G P+AGKST L+ +T A Sbjct: 122 GGRGNIHFASATNPAPEIAENGEPGQTVSLSLELRVLADVGLVGFPSAGKSTLLSVITSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA Y FTTL PNLG+V+ + ++F +AD+PG+++ A +G G+G +FL+H ERT V+L Sbjct: 182 KPKIAGYHFTTLVPNLGMVRLDDGRDFAVADLPGLVEGASKGVGLGFQFLRHVERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H+V S +E + Y I EL Y+ ++ K+ +IV +++D ++ D L K++L Sbjct: 242 HLVDMSGVEGRDPYDDYLVINKELVEYDPDILKRPQIVVATKMDLPNAKDNLQIFKDKLT 301 Query: 298 ------TQCGQVPFEFSSITGHGIPQIL 319 T+ +V SS+T G+ +++ Sbjct: 302 SGHSVDTELPEV-LAISSVTHAGLSELI 328 >gi|57506224|ref|ZP_00372143.1| GTP-binding protein Obg [Campylobacter upsaliensis RM3195] gi|57015492|gb|EAL52287.1| GTP-binding protein Obg [Campylobacter upsaliensis RM3195] Length = 338 Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 135/283 (47%), Positives = 196/283 (69%), Gaps = 2/283 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ + SGDGG G +SFRREK + GGPDGG GG+GGDV I +N +TL++F+ + Sbjct: 2 FIDSVKLTLASGDGGKGAVSFRREKHVPLGGPDGGDGGKGGDVIIICDNNTHTLMNFKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +AQ+G G RN++G KG ++ L VP GTQ+ + ++ DL +EGQR I GG Sbjct: 62 KELRAQNGAAGQGRNKNGKKGTNLELIVPQGTQIIDAKTGKILLDLIKEGQREIFLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+STNQ P YA PG+ G+ + L+LKLIAD+G++G PNAGKST ++ V+ A Sbjct: 122 GGLGNTHFKNSTNQRPDYAQPGVKGEICEVKLELKLIADVGLVGFPNAGKSTLISVVSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP+IA+Y FTTL P LG+V+ + Y F++ADIPGII+ A G G+G FLKH ERT+ LL Sbjct: 182 KPEIANYEFTTLTPKLGLVEVDEYHSFVMADIPGIIEGASGGKGLGLLFLKHIERTNFLL 241 Query: 242 HIVSALEE-NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT 283 ++ + + +++ + + EL +++ EL K+ V +S+ID+ Sbjct: 242 FVLDTMRQMSLKEQFIILKKELKSFSKELSKRSFGVMISKIDS 284 >gi|227872367|ref|ZP_03990718.1| spo0B-associated GTP-binding protein [Oribacterium sinus F0268] gi|227841796|gb|EEJ52075.1| spo0B-associated GTP-binding protein [Oribacterium sinus F0268] Length = 434 Score = 211 bits (538), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 138/330 (41%), Positives = 205/330 (62%), Gaps = 17/330 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+Y++SG GG G +SFRRE F+ GGPDGG GG+GGD+ ++ LN+L FR++ Sbjct: 2 FADIAKIYVKSGKGGNGHVSFRRELFVPAGGPDGGDGGKGGDIIVEVDKGLNSLEPFRHK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + A+ G++G R G G+D++L VP GT + +E+ LI D+ E QR+IL GG Sbjct: 62 TKYAAEPGQEGDGRKMHGKNGKDLILKVPEGTLLKDEETGKLIADMSGENQRMILLKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + QAP +A PG +E + ++L++IAD+G++G PN GKST L+ + A Sbjct: 122 GGLGNMHFATPAMQAPKFAQPGEEAREITLRMELRVIADVGLVGYPNVGKSTLLSMCSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IA+Y FTTL P+LG+V +G + F++ADIPGII+ A G G+G +FL+H R+ VL+ Sbjct: 182 RPEIANYHFTTLNPHLGVVNLKGDRSFVMADIPGIIEGASSGVGLGFQFLRHIHRSRVLI 241 Query: 242 HIVSA--------LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 H+V A LE+ +Q +C Y+ E+ +K IV ++I+ V S+ Sbjct: 242 HMVDAAGTEGRKPLEDFLQIQKEC-----EEYDEEILRKPMIVAANKIELVQSEEQEEDL 296 Query: 294 NELATQCGQ--VP-FEFSSITGHGIPQILE 320 L C + +P F S+ + GI ILE Sbjct: 297 VLLEKYCTEHKLPFFRLSAASNQGILPILE 326 >gi|311087796|gb|ADP67875.1| GTPase ObgE [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 245 Score = 211 bits (538), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 116/241 (48%), Positives = 171/241 (70%), Gaps = 1/241 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D+A +++ +G+GG G +SFRREK+I GGPDGG+GG GG++W++A +NLNTLID R Sbjct: 1 MKFIDQAIIHVIAGNGGNGCVSFRREKYIPKGGPDGGNGGDGGNIWLEANNNLNTLIDLR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+AQ+G+ G R SG KG+D+ + VP+GT+V +I DL Q Q++++A G Sbjct: 61 FKKKFQAQNGQNGSSRKSSGKKGDDIKIHVPIGTKVINYQTREIIGDLIQHKQKMLIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GNA FKSSTN+ P + G +G+++ I L+L L+AD+G +G+PN GKST + +++ Sbjct: 121 GWHGLGNARFKSSTNRTPRQSTLGSIGEKRDIQLELMLLADVGTLGMPNVGKSTLVTNIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AK KI+DYPFTTL+P LG V + K+FI+ADIPGIIK I + F K + + Sbjct: 181 GAKTKISDYPFTTLHPVLGSVNIQKNKKFIIADIPGIIKGGILWCRIRNSFFKAFRKMQI 240 Query: 240 L 240 + Sbjct: 241 I 241 >gi|318060736|ref|ZP_07979459.1| GTPase CgtA [Streptomyces sp. SA3_actG] gi|318081035|ref|ZP_07988367.1| GTPase CgtA [Streptomyces sp. SA3_actF] gi|333027127|ref|ZP_08455191.1| putative GTPase ObgE [Streptomyces sp. Tu6071] gi|332746979|gb|EGJ77420.1| putative GTPase ObgE [Streptomyces sp. Tu6071] Length = 481 Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 137/333 (41%), Positives = 202/333 (60%), Gaps = 8/333 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G+GG G S REKF GGPDGG+GGRGGDV + ++ TL+D+ + Sbjct: 4 FVDRVELHVAAGNGGHGCASVHREKFKPLGGPDGGNGGRGGDVILVVEQSVTTLLDYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG +GED+VL VP GT V + G +++ DL +G + A GG Sbjct: 64 PHRKATNGKPGEGGNRSGKEGEDLVLPVPDGTVVLDRAG-NVLADLVGQGTSFVAASGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G + L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALSSARRKAPGFALLGEPGDAGDLLLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V G F +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 RPKIADYPFTTLIPNLGVVTAGETVFTVADVPGLIPGASQGKGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK-KNELA 297 ++ + LE + I +EL Y L K+ +V L++ID D LA + +L Sbjct: 243 VLDTATLESDRDPVSDLDVIEEELKQYGG-LNKRPRVVVLNKIDVPDGKDLAEMVRPDLE 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 + QV FE S++ G+ ++ L D + R Sbjct: 302 ARGYQV-FEVSAVAHTGLRELSFALGDLVARYR 333 >gi|259046826|ref|ZP_05737227.1| Spo0B-associated GTP-binding protein [Granulicatella adiacens ATCC 49175] gi|259036449|gb|EEW37704.1| Spo0B-associated GTP-binding protein [Granulicatella adiacens ATCC 49175] Length = 449 Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 129/305 (42%), Positives = 200/305 (65%), Gaps = 5/305 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D A + +++G GG G ++FRREK++ GGP GG GG+GG V + S L TL+DFR++ Sbjct: 18 FYDRATIQVKAGKGGDGMVAFRREKYVPDGGPAGGDGGKGGSVIFKVDSGLRTLLDFRHK 77 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE GM ++ G ED+++ VP GT V + +LI DL ++GQ +++A GG Sbjct: 78 RHFKAKPGENGMSKSMYGRGAEDLIVKVPPGTIVRNAETKALIADLVEDGQEVVVAKGGR 137 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E + L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 138 GGRGNIRFATHKNPAPDIAENGEPGEEFELDLELKVLADVGLVGFPSVGKSTLLSVISSA 197 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL P LG+ + ++F++AD+PG+I+ AH G G+G FLKH ERT VLL Sbjct: 198 KPKIADYHFTTLNPQLGMAQSPNGEQFVVADLPGLIEGAHTGVGLGIHFLKHIERTKVLL 257 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ +A+E + Y+ I +EL +Y+ L ++ ++ +++D + + L + K +LA Sbjct: 258 HVIDMAAMEGRDPFEDYKIIQEELGSYHLRLLERPMLIVANKMDQPQAEENLEKFKKDLA 317 Query: 298 TQCGQ 302 + Sbjct: 318 DSLAE 322 >gi|295698491|ref|YP_003603146.1| GTP-binding protein Obg/CgtA [Candidatus Riesia pediculicola USDA] gi|291157374|gb|ADD79819.1| GTP-binding protein Obg/CgtA [Candidatus Riesia pediculicola USDA] Length = 337 Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 124/337 (36%), Positives = 208/337 (61%), Gaps = 11/337 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGG--PDGGSGGRGGDVWIQATSNLNTLID 58 MKF+DE ++ + +G+GG+G +SF++ K P+GG GG+GGD+++ + ++N L Sbjct: 1 MKFIDEIEISVIAGNGGSGCVSFQKNKTRTLNRKVPNGGDGGKGGDIYLVSDKDMNDLTY 60 Query: 59 FRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 + Y + +A++G+ G R G KG+D++ VPVGT+VF+E ++I DL Q I +A Sbjct: 61 YHYHRTIRAENGKNGRSYLRKGKKGKDMIEKVPVGTKVFDEKK-NMIMDLKFHNQSIKVA 119 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG+ G GN F+ T ++ + G G +K I+L+L +IAD+G++G+PN+GKS+ + Sbjct: 120 VGGSFGLGNHRFR--TKRSDRFTE-GKYGDKKKIFLELNMIADVGLLGMPNSGKSSLIRQ 176 Query: 179 VTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 ++ AKPK+ADYPFTTL+P+LG+V+ + FI+ADIPG+I A +G G+G RFLKH ER Sbjct: 177 ISSAKPKVADYPFTTLFPHLGVVRTEKRSFIVADIPGLIDGASKGIGLGIRFLKHLERCS 236 Query: 239 VLLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 +LLH+V +E+ ++ + I E+ +Y L +K + ++ID +D + +E Sbjct: 237 ILLHVVDISQEDTRSPIERIKTIDSEIISYKKSLFEKERWIVFNKIDLLDEKFYKKTVDE 296 Query: 296 LATQCG--QVPFEFSSITGHGIPQILECLHDKIFSIR 330 + + + + S+I G+ + + D I S R Sbjct: 297 IVQKISWKKKYYSISAIKKIGLKNLCRDIADYISSER 333 >gi|290960394|ref|YP_003491576.1| GTP-binding protein [Streptomyces scabiei 87.22] gi|260649920|emb|CBG73036.1| GTP-binding protein [Streptomyces scabiei 87.22] Length = 478 Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 135/328 (41%), Positives = 195/328 (59%), Gaps = 6/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G+GG G S REKF GGPDGG+GGRGGDV + ++ TL+D+ + Sbjct: 4 FVDRVELHVAAGNGGHGCASVHREKFKPLGGPDGGNGGRGGDVILTVDQSVTTLLDYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA G+ G NRSG G+D+VL VP GT V + G +++ DL G + A GG Sbjct: 64 PHRKATAGKPGEGGNRSGKDGQDLVLPVPDGTVVLDRQG-NVLADLVGHGTSFVAAQGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G+ G I L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALSSARRKAPGFALLGVPGDMGDIVLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGETVYTIADVPGLIPGASQGKGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + LE + I +EL+ Y L K+ IV L++ID D LA Sbjct: 243 VLDTATLESDRDPVSDLDIIEEELTQYGG-LDKRPRIVVLNKIDVPDGKDLAEMVRPDLE 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKI 326 G FE S++ G+ ++ L D + Sbjct: 302 ARGYRVFEVSAVAHTGLRELSFALADLV 329 >gi|256383883|gb|ACU78453.1| Obg family GTPase CgtA [Mycoplasma mycoides subsp. capri str. GM12] gi|256384714|gb|ACU79283.1| Obg family GTPase CgtA [Mycoplasma mycoides subsp. capri str. GM12] gi|296455910|gb|ADH22145.1| Obg family GTPase CgtA [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 433 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 126/287 (43%), Positives = 189/287 (65%), Gaps = 5/287 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D A + I++G GG G +SF F+ GGP+GG GG GG V+ ++L+D + Sbjct: 1 MKFVDFADLIIKAGKGGDGAVSFLHALFVPNGGPNGGDGGDGGSVYFLGDEGKHSLLDLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ + AQ G KG +N GAKGED ++ VPVGT ++++ +++ D+++ + +++A G Sbjct: 61 LQKKYSAQDGFKGDIKNMHGAKGEDKIIKVPVGTILYDKKTNTILADINENNKLVLIAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F +S N+AP G LGQE I +LK++AD+G +GLPNAGKST L +++ Sbjct: 121 GKGGKGNARFANSRNKAPTIFEAGELGQEFEIRAELKVLADVGFVGLPNAGKSTLLRAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +KP +ADYPFTT+ P LG+ + + FI+AD+PG+I+ A G G+G +FLKH ER V Sbjct: 181 NSKPVVADYPFTTITPQLGVARTKNNDTFIVADLPGLIQGASLGKGLGHQFLKHIERCLV 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 + HI+ A E++ Y+ I DEL AYN L K+ EI+ L+++D Sbjct: 241 ICHIIDASGNFGSEDIIKNYELIRDELKAYNLNLEKRPEIIVLNKMD 287 >gi|78169684|gb|ABB26781.1| Small GTP-binding protein domain [Synechococcus sp. CC9902] Length = 336 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 137/327 (41%), Positives = 206/327 (62%), Gaps = 1/327 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 ++F+D+A++ R G GG G +FRREK++ GGP GG GG GG V ++A SNL TL+DF+ Sbjct: 8 VQFIDQARISTRGGRGGDGIAAFRREKYVPAGGPSGGDGGHGGHVVLEADSNLQTLLDFK 67 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F A G++G R+G G ++V+ VP GT+V L+ DL + G R++ A G Sbjct: 68 YKRLFAADDGKRGGPNKRTGVSGRELVIKVPCGTEVRHLTTGILLGDLIEPGTRLVAAFG 127 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S+ N+AP G G+E + L+LKL+A++GIIGLPNAGKST +A ++ Sbjct: 128 GRGGLGNAHYLSNRNRAPEKFTEGRDGEEWPLQLELKLLAEVGIIGLPNAGKSTLIAVLS 187 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ + + ADIPG+I A QGAG+G FL+H ERT + Sbjct: 188 AARPKIADYPFTTLIPNLGVVRRPSGDGTVFADIPGLIAGAAQGAGLGHDFLRHIERTRL 247 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H+V A ++ + + EL AY L + ++ L++ + V L +L Sbjct: 248 LIHLVDAGSDDPVEDLRVVEQELKAYGHGLVDRPRLLVLNKKELVQESDLPGVLADLENA 307 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKI 326 G+ S+ G + ++LE + +++ Sbjct: 308 SGRDVSCISAAMGTNLNELLENVWNEL 334 >gi|293400492|ref|ZP_06644637.1| Obg family GTPase CgtA [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305518|gb|EFE46762.1| Obg family GTPase CgtA [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 429 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 133/325 (40%), Positives = 200/325 (61%), Gaps = 14/325 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D KV++++G GG G ++FRREK++ +GGP GG GG GGDV TL+D RY Sbjct: 2 FVDRVKVHVKAGKGGDGIVAFRREKYVAYGGPSGGDGGDGGDVVFMVDEGKTTLLDLRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 Q A+ G KG + GA+G D V+ VP+GT V + +I DL +GQR ++A GG Sbjct: 62 QKIAAEPGGKGKTKKMHGARGADCVVKVPLGTIVKDMKSGRIIADLTHKGQREVIAKGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 G GN HFKSS N AP YA G G+E I ++LK++AD+G++G P+ GKST L+ V++A Sbjct: 122 KGKGNFHFKSSKNTAPQYAELGAPGEELDIQVELKVLADVGLVGFPSVGKSTLLSVVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IA+Y FTTL PNLG+V+ + F++AD+PG+I+ A +G G+G +FL+H ER V++ Sbjct: 182 RPEIAEYHFTTLAPNLGMVQVPDGRSFVMADLPGLIEGASEGKGLGHQFLRHIERCRVII 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V + + Y+ I +EL+ Y L ++ +IV +++D L + K L Sbjct: 242 HVVDMGSHDGRDPLEDYKIINEELANYEYRLMERPQIVLANKMD------LEKAKENLER 295 Query: 299 QCGQVP----FEFSSITGHGIPQIL 319 P FE ++I G+ +L Sbjct: 296 FKKAYPEVEVFETTTIIAEGLEPVL 320 >gi|283779678|ref|YP_003370433.1| GTP-binding protein Obg/CgtA [Pirellula staleyi DSM 6068] gi|283438131|gb|ADB16573.1| GTP-binding protein Obg/CgtA [Pirellula staleyi DSM 6068] Length = 399 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 128/324 (39%), Positives = 202/324 (62%), Gaps = 7/324 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D + ++ G GG G +SFRREK++ GGPDGG GG GG V I A +N L + Sbjct: 2 FVDRVTIEVQGGRGGDGCVSFRREKYVPKGGPDGGDGGDGGSVIIVAKYGVNNLASMAHH 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + ++A G G R G ED+++ VP GT + + +I DL +G +I A GG Sbjct: 62 KFWRAPSGNHGSGSGRYGKAAEDLIIEVPPGTIISDAAAGYVIKDLANDGDTLIAAKGGG 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK+ TN+AP A PG G++++I L+LK+IAD+G++G PNAGKST L+ +TRA Sbjct: 122 GGRGNLRFKTPTNRAPREATPGAEGEKRLISLELKVIADVGLVGKPNAGKSTLLSRLTRA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IADYPFTT +PNLG+V+ + + F++ADIPG+I+ AH GAG+G FL+H ER +L+ Sbjct: 182 RPQIADYPFTTKHPNLGMVQVDADRTFVMADIPGLIEGAHSGAGLGHEFLRHIERAGILV 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V + ++ I EL Y+ +L ++ EI+ +++ + +++ + + +A Sbjct: 242 HLVEPSPTDGTDPLDNFRTIRSELKQYDVKLSERPEIIVVTKAELPNAEEV---RQIIAA 298 Query: 299 QCGQVPFEFSSITGHGIPQILECL 322 + G S++TG G+ ++ + Sbjct: 299 EAGLPVLLISAVTGQGLNELTRAI 322 >gi|260437114|ref|ZP_05790930.1| Obg family GTPase CgtA [Butyrivibrio crossotus DSM 2876] gi|292810426|gb|EFF69631.1| Obg family GTPase CgtA [Butyrivibrio crossotus DSM 2876] Length = 427 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 142/339 (41%), Positives = 213/339 (62%), Gaps = 12/339 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK++I+SG GG G +SFRRE F+ GGPDGG GG+GGDV + LNTL +FR+ Sbjct: 2 FADYAKIFIKSGKGGDGHVSFRRELFVAAGGPDGGDGGKGGDVIFEVDKGLNTLNEFRHV 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ GE+G KR G G D+++ VP GT + ++ +I D+ +R ++ GG Sbjct: 62 RKYVAESGEEGGKRLCHGRNGNDLIIKVPEGTIIRDDVSGKVIADMSNGREREVVLKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKL--KLIADIGIIGLPNAGKSTFLASVT 180 GG GN ++ ++T Q P YA PG GQ K +W+KL K+IAD+G++G PN GKST L+ V+ Sbjct: 122 GGKGNKNYATATMQVPKYAQPG--GQAKELWVKLELKVIADVGLVGFPNVGKSTLLSMVS 179 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIA+Y FTTL PNLG+V EG +++ADIPG+I+ A +G G+G FL+H ER V Sbjct: 180 NARPKIANYHFTTLNPNLGVVDLEGADGYVIADIPGLIEGASEGVGLGHEFLRHIERCKV 239 Query: 240 LLHIVSALEENVQAAYQCILD---ELSAYNSELRKKIEIVGLSQIDTV---DSDTLARKK 293 ++H+V A + I EL AYN EL K+ +++ ++ D + D D + + K Sbjct: 240 IIHMVDAASSEGRDPIDDINKINAELEAYNPELIKRPQVIAANKTDLIFAGDEDPVQKIK 299 Query: 294 NELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 +E + +V F S+ TG G+ ++L + + + S+ E Sbjct: 300 DEFEPKGIKV-FPISAATGKGLKELLYAVRNILDSLDPE 337 >gi|315640896|ref|ZP_07895992.1| Spo0B-associated GTP-binding protein [Enterococcus italicus DSM 15952] gi|315483314|gb|EFU73814.1| Spo0B-associated GTP-binding protein [Enterococcus italicus DSM 15952] Length = 442 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 139/334 (41%), Positives = 207/334 (61%), Gaps = 13/334 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGG+V L TL+DFR+ Sbjct: 9 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGNVVFVVDEGLRTLMDFRFN 68 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM + G ED+++ VP GT V + + +I DL ++GQ +++A GG Sbjct: 69 RHFKADPGENGMSKGMHGRGSEDLLVKVPQGTTVRDVETGKVIGDLIEQGQTLVVAQGGR 128 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ + L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 129 GGRGNIRFASPKNPAPELAENGEPGQERKLELELKVLADVGLVGFPSVGKSTLLSIISSA 188 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTTL PNLG+V ++F++AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 189 KPKIGAYHFTTLVPNLGMVHTSDGRDFVVADLPGLIEGASQGVGLGTQFLRHIERTRVIL 248 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HI+ S LE + Y I EL +N L ++ +++ +++D ++ + LA + ++A Sbjct: 249 HIIDMSGLEGRDPYDDYLAINHELETHNLRLLERPQLIVANKMDMPNAEENLAEFRKKIA 308 Query: 298 TQCG-------QVPFEFSSITGHGIPQILECLHD 324 Q Q+ F SSI GI +L D Sbjct: 309 AQQTDEFADPIQI-FPISSIAKKGIQPLLNATAD 341 >gi|119717671|ref|YP_924636.1| GTPase ObgE [Nocardioides sp. JS614] gi|261277706|sp|A1SMB4|OBG_NOCSJ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|119538332|gb|ABL82949.1| small GTP-binding protein [Nocardioides sp. JS614] Length = 516 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 193/320 (60%), Gaps = 6/320 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ +G GG G S REKF GGPDGG+GG GG V ++ ++ TL+D+ + Sbjct: 6 FVDRVTLHVSAGRGGNGVASVHREKFKPLGGPDGGNGGPGGSVTLRVDPDVTTLLDYHHS 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +A+HG G +R+GA G D+VL VP GT V + G L+ DL G +++A GG Sbjct: 66 PKRRAEHGGHGAGAHRNGAHGADLVLPVPDGTVVSDPQG-HLLADLVGPGTELVVAQGGR 124 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G E I L+LK++ADIG++G P+AGKS+ +A+++RA Sbjct: 125 GGLGNAALASAKRKAPGFALLGEPGDELEIVLELKVVADIGLVGFPSAGKSSLIAAISRA 184 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V G F +AD+PG+I+ A +G G+G FL+H ER ++H Sbjct: 185 RPKIADYPFTTLVPNLGVVSAGDTTFTVADVPGLIEGASEGRGLGHDFLRHIERCAAIVH 244 Query: 243 IVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 +V N I +EL+ Y L + +V L+++D D +A + Sbjct: 245 VVDTASIEPGRNPVDDLDVIENELTRYGG-LEDRPRLVALNKVDVPDGRDIAGFVVDELR 303 Query: 299 QCGQVPFEFSSITGHGIPQI 318 Q G FE S+ +G G+ ++ Sbjct: 304 QRGLRVFEVSAASGEGLREL 323 >gi|29839966|ref|NP_829072.1| GTPase ObgE [Chlamydophila caviae GPIC] gi|81838016|sp|Q824F3|OBG_CHLCV RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|29834313|gb|AAP04950.1| GTP1/OBG family protein [Chlamydophila caviae GPIC] Length = 335 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 132/328 (40%), Positives = 202/328 (61%), Gaps = 22/328 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +R+G GG G +++R+EK++ GGP GG+GG GG + I++ +++ + +R Sbjct: 2 FLDQITIELRAGKGGNGVVAWRKEKYLPKGGPYGGNGGVGGSIIIESATHVYSFESYRNI 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KA+ G+ G NRSG G+D+VL VP GT + + + +I D ++G+R+++ GG Sbjct: 62 RFLKAEDGQSGATNNRSGRNGKDLVLVVPEGTLLRDVETREIIYDFAKDGERLVICRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK+STN+AP A PG G+ + + L+LKLIADIG++G PNAGKST ++ + Sbjct: 122 GGKGNTFFKTSTNRAPTKATPGKPGEVRQVELELKLIADIGLVGFPNAGKSTLFNTLAKT 181 Query: 183 KPKIADYPFTTLYPNLGIV----KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 + K+ YPFTTL P LG+V K K +I+ADIPGII+ AHQ G+G FL+H ERT Sbjct: 182 EVKVGAYPFTTLQPVLGLVPCREKLYQKPWIIADIPGIIEGAHQNRGLGLDFLRHIERTR 241 Query: 239 VLLHIV-------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 +LL +V S+ EE++ + ++DEL Y +L K I+ L++ID + D Sbjct: 242 LLLFVVDICGCERSSPEEDL----RILMDELLHYKEDLADKGRIIALNKIDDLLPD---E 294 Query: 292 KKNELATQCGQVPFE----FSSITGHGI 315 ++ L P E S +TG G+ Sbjct: 295 RQERLENFQRLFPSEQFVMLSGLTGEGV 322 >gi|262038813|ref|ZP_06012162.1| Obg family GTPase CgtA [Leptotrichia goodfellowii F0264] gi|261747146|gb|EEY34636.1| Obg family GTPase CgtA [Leptotrichia goodfellowii F0264] Length = 427 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 136/322 (42%), Positives = 202/322 (62%), Gaps = 5/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE+ + + SG GG G +FRREKF++FGGPDGG GG+GGD+ N+NTL+DF+ Sbjct: 2 FIDESVITVISGRGGDGAATFRREKFVQFGGPDGGDGGKGGDIAFLTDPNINTLVDFKSS 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F+A GE+G +G G D+++ VPVGT + + + L+ DLD+ +++I GG+ Sbjct: 62 KKFQAGDGERGAAARSTGKSGNDLIIKVPVGTMIRDFETNRLLLDLDRPNEKVIFLKGGD 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFKSS +AP A G G E I L+LKL+AD ++G P+ GKS+F+ V+ A Sbjct: 122 GGRGNIHFKSSVRKAPRIAESGREGAELKIKLELKLLADAALVGYPSVGKSSFINKVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 K+A Y FTTL P LG+V+ G +E F++AD+PG+I+ AH+G G+GDRFLKH ER +++ Sbjct: 182 NSKVASYHFTTLKPKLGVVRIGDEESFVIADVPGLIEGAHEGIGLGDRFLKHIERCKLII 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 HIV S ++ + + + I EL Y+ +L KK +IV ++ID + D + Sbjct: 242 HIVDISGIDGRSPEEDFLKINRELENYSEKLAKKPQIVVANKIDMLYDDKKYDSFEKFVK 301 Query: 299 QCG-QVPFEFSSITGHGIPQIL 319 G + + S I GI +L Sbjct: 302 DRGIEYVYPVSVIANEGIKPVL 323 >gi|158317014|ref|YP_001509522.1| GTPase ObgE [Frankia sp. EAN1pec] gi|261266794|sp|A8L1V6|OBG_FRASN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|158112419|gb|ABW14616.1| GTP-binding protein Obg/CgtA [Frankia sp. EAN1pec] Length = 541 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 131/318 (41%), Positives = 193/318 (60%), Gaps = 6/318 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ +GDGG G S REKF GGPDGG+GGRGG+V ++ S + TL+DF + Sbjct: 4 FVDRVVLHAAAGDGGHGCCSIHREKFKPLGGPDGGNGGRGGNVLLRVDSGVTTLLDFHFH 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H +A G G NR GA G+D+VL+VP GT V DG I DL G +LA GG Sbjct: 64 PHQRAGGGRPGQGSNRHGADGDDLVLSVPDGTVVLSPDG-EQIVDLVGAGSTYVLAHGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G++ L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGRGNASLASARRKAPGFAELGEPGEQLDAVLELKSVADVALVGFPSAGKSSLVSVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADYPFTTL PNLG+V+ G ++ F +AD+PG+I A QG G+G FL+H ER +++ Sbjct: 183 RPKIADYPFTTLVPNLGVVQAGDHRPFTVADVPGLIPGASQGRGLGLEFLRHIERCSLIV 242 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 H++ + LE + I EL+AY ++L + +V L+++D D+ LA Sbjct: 243 HVLDCATLEPGRDPLTDLDVIEAELAAYTTDLSDRPRLVVLNKVDVPDAAELAELVTPDL 302 Query: 298 TQCGQVPFEFSSITGHGI 315 G + S+ + HG+ Sbjct: 303 QARGLAVHQISTASRHGV 320 >gi|313837369|gb|EFS75083.1| Obg family GTPase CgtA [Propionibacterium acnes HL037PA2] gi|314927957|gb|EFS91788.1| Obg family GTPase CgtA [Propionibacterium acnes HL044PA1] gi|314971753|gb|EFT15851.1| Obg family GTPase CgtA [Propionibacterium acnes HL037PA3] Length = 505 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 129/317 (40%), Positives = 192/317 (60%), Gaps = 5/317 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A + +G GG G S +REKF GGPDGG+GG GG V ++ + TL+D+ +Q Sbjct: 6 FVDRATLTAVAGRGGHGCASVKREKFKPLGGPDGGNGGNGGSVILRVDPQVTTLVDYHWQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 KA +GE G N++GA G D+VL VP GT V + D L+ DL G +++A GG Sbjct: 66 STRKATNGEPGRGDNQAGANGSDIVLGVPEGTIVSDADTGELLGDLVGAGSELVVAAGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA +S +AP +A G G+E+ I L+LK++ADIG++G P+AGKS+ +A+++RA Sbjct: 126 GGLGNAALANSARKAPGFALLGEAGEERKILLELKVVADIGLVGFPSAGKSSLIAAISRA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A G G+G FL+H ER ++H Sbjct: 186 KPKIADYPFTTLVPNLGVVVAGETTYTVADVPGLIPGASLGKGLGFDFLRHIERCRAIVH 245 Query: 243 IVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + + + I EL ++ L + +V L+++D D+ LA + Sbjct: 246 VIDCATYEPDRDPVSDLDVIEGELISHGG-LEDRPRLVVLNKVDVPDAADLADIVFDDVA 304 Query: 299 QCGQVPFEFSSITGHGI 315 + G F S+ +G G+ Sbjct: 305 KRGWPVFRISTKSGEGL 321 >gi|317123006|ref|YP_004103009.1| GTP-binding protein Obg/CgtA [Thermaerobacter marianensis DSM 12885] gi|315592986|gb|ADU52282.1| GTP-binding protein Obg/CgtA [Thermaerobacter marianensis DSM 12885] Length = 473 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 138/322 (42%), Positives = 206/322 (63%), Gaps = 4/322 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DEA++Y+ +G GG G +SFRREK++ GGPDGG GGRGGDV + L TL D RY+ Sbjct: 7 FVDEAEIYVEAGTGGNGAVSFRREKYVPRGGPDGGDGGRGGDVILVVDPALTTLADLRYR 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H++A G G NR G +GED + VP GT V + D +++ DL QR+++A GG Sbjct: 67 RHYRAGRGGHGEGGNRHGRRGEDCYVPVPPGTVVRDRDTGAILADLADPDQRVVVARGGR 126 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F + +AP A G G+ + + L+L+L+AD+G++G PNAGKS+ LA ++ A Sbjct: 127 GGRGNARFATPRRKAPRLAEKGEPGERRWLKLELRLLADVGLVGWPNAGKSSLLARISAA 186 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PK+A YPFTTL PNLG+V+ G + F++ADIPG+I+ AHQG G+G FL+H +RT VL+ Sbjct: 187 RPKVAAYPFTTLAPNLGVVQRGPGRSFVVADIPGLIEGAHQGVGLGHEFLRHVQRTRVLV 246 Query: 242 HIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++V A + Q + DEL AY + L ++ +V +++D + + E A Sbjct: 247 YVVDAAATEGRDPQQDLATLRDELEAYEASLLERPGVVAANKMDLPAAAAHLSRLEEAAR 306 Query: 299 QCGQVPFEFSSITGHGIPQILE 320 + G S+ TG G+ ++L+ Sbjct: 307 RWGLELVPISAATGEGLDRLLD 328 >gi|219670340|ref|YP_002460775.1| GTPase ObgE [Desulfitobacterium hafniense DCB-2] gi|261266758|sp|B8FUR9|OBG_DESHD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|219540600|gb|ACL22339.1| GTP-binding protein Obg/CgtA [Desulfitobacterium hafniense DCB-2] Length = 424 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 217/321 (67%), Gaps = 5/321 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+AK+Y++ GDGGAG ++FRREK++ GGP GG GGRGG V A L TL+DFRY+ Sbjct: 2 FYDQAKIYVKGGDGGAGAVAFRREKYVPEGGPSGGDGGRGGKVIFIADEGLRTLVDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KA GE G +N G GED+ + +PVGT V + D ++ DL + GQ++++A GG Sbjct: 62 RHYKADRGEHGQGKNMHGKSGEDMSVRIPVGTVVKDADTGEILADLIEHGQKVVVANGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F S+TN+AP A G G+E+ + L+LKL+AD+G++G PN GKST ++ ++ A Sbjct: 122 GGRGNARFMSNTNKAPTVAENGEPGEERNLLLELKLLADVGLVGFPNVGKSTIISRISAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+V+ E + F++ADIPG+I+ AH GAG+G FL+HTERT ++L Sbjct: 182 KPKIADYHFTTLVPNLGVVELEDGESFVVADIPGLIEGAHTGAGLGHEFLRHTERTRLIL 241 Query: 242 HIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ + E + +Q I +EL Y+ EL + ++ +++D ++ ++ E Sbjct: 242 HVLDIAGSEERDPLEDFQIIAEELRQYSQELANRPILIVANKMDIPGAEENLQRLTEKLG 301 Query: 299 QCGQVPFEFSSITGHGIPQIL 319 + ++ F S+ TG G+ +++ Sbjct: 302 EDYRI-FPVSAATGEGLKELV 321 >gi|56807406|ref|ZP_00365378.1| COG0536: Predicted GTPase [Streptococcus pyogenes M49 591] Length = 313 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 127/288 (44%), Positives = 189/288 (65%), Gaps = 4/288 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +++A GG Sbjct: 64 RKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ Sbjct: 244 HVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEA 291 >gi|315093141|gb|EFT65117.1| Obg family GTPase CgtA [Propionibacterium acnes HL060PA1] Length = 505 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 133/336 (39%), Positives = 199/336 (59%), Gaps = 6/336 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A + +G GG G S +REKF GGPDGG+GG GG V ++ + TL+D+ +Q Sbjct: 6 FVDRATLTAVAGKGGHGCASVKREKFKPLGGPDGGNGGHGGSVILRVDPQVTTLVDYHWQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 KA +GE G N++GA G D++L VP GT V + D L+ DL G +++A GG Sbjct: 66 STRKATNGESGRGDNQAGANGSDMILAVPEGTVVSDADTGELLGDLVGVGAELVVAAGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA +S +AP +A G G+E+ I L+LK++ADIG++G P+AGKS+ +A+++RA Sbjct: 126 GGLGNAALANSARKAPGFALLGEAGEERKILLELKVVADIGLVGFPSAGKSSLIAAISRA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A G G+G FL+H ER ++H Sbjct: 186 KPKIADYPFTTLVPNLGVVVAGETTYTVADVPGLIPGASLGKGLGFDFLRHIERCRAIVH 245 Query: 243 IVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + + I EL A+ L + +V L+++D D+ LA + Sbjct: 246 VIDCATYEPGRDPVSDLDVIEGELIAHGG-LEDRPRLVVLNKVDVPDAADLADIVFDDVA 304 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 + G F S+ +G G+ + + + I R +NE Sbjct: 305 ERGWPVFRVSTKSGEGLNSLKFAMAELIEKAR-DNE 339 >gi|315144449|gb|EFT88465.1| Obg family GTPase CgtA [Enterococcus faecalis TX2141] Length = 436 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 139/333 (41%), Positives = 208/333 (62%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGG V + L TL+DFR+ Sbjct: 2 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGGVVLVVEEGLRTLMDFRFN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM + G ED+++ VP GT V + + +LI DL + GQ +++A GG Sbjct: 62 RHFKATPGENGMSKGMHGRGSEDLLVKVPPGTTVRDAETGALIGDLIENGQTLVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 122 GGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 RPKIGAYHFTTLVPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I EL+++N L ++ +I+ +++D ++ + LA+ K +LA Sbjct: 242 HVIDMSGMEGRDPYEDYLAINKELASHNLRLMERPQIIVANKMDMPEAEENLAKFKEQLA 301 Query: 298 TQ-----CGQVP-FEFSSITGHGIPQILECLHD 324 + ++P F S +T GI +L D Sbjct: 302 KERTDEYADELPIFPISGVTRKGIEPLLNATAD 334 >gi|307292028|ref|ZP_07571897.1| Obg family GTPase CgtA [Enterococcus faecalis TX0411] gi|306497026|gb|EFM66574.1| Obg family GTPase CgtA [Enterococcus faecalis TX0411] Length = 436 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 138/333 (41%), Positives = 207/333 (62%), Gaps = 11/333 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGG + L TL+DFR+ Sbjct: 2 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGGGVLVVEEGLRTLMDFRFN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA GE GM + G ED+++ VP GT V + + +LI DL + GQ +++A GG Sbjct: 62 RHFKATPGENGMSKGMHGRGSEDLLVKVPPGTTVRDAETGALIGDLIENGQTLVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 122 GGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 RPKIGAYHFTTLVPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ S +E + Y I EL+++N L ++ +I+ +++D ++ + LA+ K +LA Sbjct: 242 HVIDMSGMEGRDPYEDYLAINKELASHNLRLMERPQIIVANKMDMPEAEENLAKFKEQLA 301 Query: 298 TQ-----CGQVP-FEFSSITGHGIPQILECLHD 324 + ++P F S +T GI +L D Sbjct: 302 KERTDEYADELPIFPISGVTRKGIEPLLNATAD 334 >gi|332686627|ref|YP_004456401.1| GTP-binding protein Obg [Melissococcus plutonius ATCC 35311] gi|332370636|dbj|BAK21592.1| GTP-binding protein Obg [Melissococcus plutonius ATCC 35311] Length = 440 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 138/335 (41%), Positives = 206/335 (61%), Gaps = 14/335 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFRY Sbjct: 2 FLDQTIIEVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVVLIVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++FKA+ GE GM + G E++ + VP GT + + + L+ DL Q GQ++++A GG Sbjct: 62 RYFKAKPGENGMNKGMHGRGAENIFVKVPPGTTIRDAETHELLGDLTQSGQKLVIANGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G G+E+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 122 GGRGNIRFASPRNPAPELAENGEPGEERKIELELKILADVGLVGFPSVGKSTLLSVISSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTT+ PNLG+V + F AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 RPKIGAYHFTTISPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGMQFLRHIERTRVIL 241 Query: 242 HIVSA---LEE-NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT--------L 289 H++ LEE + Y I EL+AY+ L ++ +I+ +++D +++ L Sbjct: 242 HVIDMSGGLEERDPYQDYLAINKELAAYDLNLLQRPQIIVANKMDMPNAENNLANFKQLL 301 Query: 290 ARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 +NE + Q+ F SSIT GI +L D Sbjct: 302 HNSENEQNIKVAQI-FPISSITKQGIESLLCATAD 335 >gi|15595126|ref|NP_212915.1| GTPase ObgE [Borrelia burgdorferi B31] gi|195941602|ref|ZP_03086984.1| GTPase ObgE [Borrelia burgdorferi 80a] gi|216264840|ref|ZP_03436832.1| GTP-binding protein Obg/CgtA [Borrelia burgdorferi 156a] gi|218249865|ref|YP_002375280.1| GTP-binding protein Obg/CgtA [Borrelia burgdorferi ZS7] gi|221217886|ref|ZP_03589353.1| GTP-binding protein Obg/CgtA [Borrelia burgdorferi 72a] gi|225548944|ref|ZP_03769921.1| GTP-binding protein Obg/CgtA [Borrelia burgdorferi 94a] gi|225549944|ref|ZP_03770905.1| GTP-binding protein Obg/CgtA [Borrelia burgdorferi 118a] gi|226320629|ref|ZP_03796188.1| GTP-binding protein Obg/CgtA [Borrelia burgdorferi 29805] gi|226321481|ref|ZP_03797008.1| GTP-binding protein Obg/CgtA [Borrelia burgdorferi Bol26] gi|81816062|sp|O51722|OBG_BORBU RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266680|sp|B7J0M7|OBG_BORBZ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|2688719|gb|AAC67127.1| GTP-binding protein (obg) [Borrelia burgdorferi B31] gi|215981313|gb|EEC22120.1| GTP-binding protein Obg/CgtA [Borrelia burgdorferi 156a] gi|218165053|gb|ACK75114.1| GTP-binding protein Obg/CgtA [Borrelia burgdorferi ZS7] gi|221192192|gb|EEE18412.1| GTP-binding protein Obg/CgtA [Borrelia burgdorferi 72a] gi|225369403|gb|EEG98855.1| GTP-binding protein Obg/CgtA [Borrelia burgdorferi 118a] gi|225370547|gb|EEG99983.1| GTP-binding protein Obg/CgtA [Borrelia burgdorferi 94a] gi|226233277|gb|EEH32029.1| GTP-binding protein Obg/CgtA [Borrelia burgdorferi Bol26] gi|226233952|gb|EEH32674.1| GTP-binding protein Obg/CgtA [Borrelia burgdorferi 29805] gi|312148440|gb|ADQ31099.1| GTP-binding protein Obg/CgtA [Borrelia burgdorferi JD1] gi|312148983|gb|ADQ29054.1| GTP-binding protein Obg/CgtA [Borrelia burgdorferi N40] Length = 328 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 119/280 (42%), Positives = 178/280 (63%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + SG+GG+G +SF REKF GGPDGG+GG GG V + NL+TL ++ Sbjct: 4 FKDSVNITVVSGNGGSGCVSFLREKFNAKGGPDGGNGGSGGSVIFKVRENLSTLSFYKNG 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 A++G+ GM RSGA G+D+ L VP T+V+ E+ +L+ L ++ GG Sbjct: 64 HVLCAENGKPGMGFKRSGANGKDLTLFVPPNTEVYNENDGTLLYRLKNLNDEFVVLKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FK+S + P +A PG G + L+L L+ADIG++GLPNAGKS+ L +T A Sbjct: 124 GGLGNWNFKTSVRRVPRFAQPGESGNSLSVRLELFLVADIGLVGLPNAGKSSLLNRITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 K ++A+YPFTT P+LG+++ Y + I+ADIPGIIK A G G+G +FLKH +T +L Sbjct: 184 KSRVANYPFTTKIPHLGMLRRSYDDLIIADIPGIIKGASFGVGLGTKFLKHIAKTKILAL 243 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 ++ E N +Y +L+EL +Y+ +L K +I+ +++D Sbjct: 244 VIDISEANFLESYNILLNELKSYSHKLFNKKKIIIANKLD 283 >gi|295398004|ref|ZP_06808060.1| obg family GTPase CgtA [Aerococcus viridans ATCC 11563] gi|294973762|gb|EFG49533.1| obg family GTPase CgtA [Aerococcus viridans ATCC 11563] Length = 441 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 133/331 (40%), Positives = 198/331 (59%), Gaps = 13/331 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+++++G GG G ++F REK+ GGP GG GGRGGD+ + L TL+DFRY Sbjct: 4 FFDYAKIWVKAGKGGDGMVAFLREKYRPDGGPAGGDGGRGGDIIFKVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE GM + G ED+ + VP GT V D +I DL + G+ +++A GG Sbjct: 64 RHFKAKPGENGMPKGMYGRGAEDMYVAVPPGTVVKNFDTGQIIGDLVENGEELVVAHGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G E + L+LKLIAD G++G P+ GKST L+ VT A Sbjct: 124 GGRGNMKFATHNNPAPEIAENGEPGDEITLQLELKLIADAGLVGFPSVGKSTLLSVVTAA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 PKI DY FTT+ PNLG+V ++ F+LAD+PG+I+ A +G G+G +FL+H ERT V+L Sbjct: 184 TPKIGDYHFTTITPNLGVVNTRSHESFVLADLPGLIEGAAEGIGLGFQFLRHVERTKVIL 243 Query: 242 HIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK-KNELA 297 H++ + + Y I EL Y+ L + I+ +++D +++ + K +LA Sbjct: 244 HVIDMGGSENRDPFDDYVAINKELDNYDDNLMSRPTIIVANKMDIPEAELYIEEFKEKLA 303 Query: 298 TQCG------QVP--FEFSSITGHGIPQILE 320 + ++P F S+ T G+ +++ Sbjct: 304 SYFAENYPDLELPEIFPISAYTREGLDPLMD 334 >gi|313890940|ref|ZP_07824562.1| Obg family GTPase CgtA [Streptococcus pseudoporcinus SPIN 20026] gi|313120664|gb|EFR43781.1| Obg family GTPase CgtA [Streptococcus pseudoporcinus SPIN 20026] Length = 435 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 136/329 (41%), Positives = 206/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ + +G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 2 FLDTAKISVHAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ I+A GG Sbjct: 62 RKFKAKAGEKGMTKGMHGRGSEDLIVPVPQGTTVKDAETGKIITDLVENGQEYIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPRNPAPEIAENGEPGEERDLELELKILADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 242 HVIDMSASEGRDPYEDYLSINNELETYNLRLLERPQIIVANKMDMPEAEENLKTFKEKLA 301 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S++ G+ +++ Sbjct: 302 ANYDEFDELPKIFPVSTLAKQGLDNLMDA 330 >gi|315080255|gb|EFT52231.1| Obg family GTPase CgtA [Propionibacterium acnes HL078PA1] Length = 505 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 129/317 (40%), Positives = 191/317 (60%), Gaps = 5/317 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A + +G GG G S +REKF GGPDGG+GG GG V ++ + TL+D+ +Q Sbjct: 6 FVDRATLTAVAGKGGHGCASVKREKFKPLGGPDGGNGGHGGSVILRVDPQVTTLVDYHWQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 KA +GE G N++GA G D++L VP GT V + D L+ DL G +++A GG Sbjct: 66 STRKATNGESGRGDNQAGANGSDMILAVPEGTVVSDADTGELLGDLVGVGAELVVAAGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA +S +AP +A G G+E+ I L+LK++ADIG++G P+AGKS+ +A+++RA Sbjct: 126 GGLGNAALANSARKAPGFALLGEAGEERKILLELKVVADIGLVGFPSAGKSSLIAAISRA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A G G+G FL+H ER ++H Sbjct: 186 KPKIADYPFTTLVPNLGVVVAGETTYTVADVPGLIPGASVGKGLGFDFLRHIERCRAIVH 245 Query: 243 IVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + + I EL A+ L + +V L+++D D+ LA + Sbjct: 246 VIDCATYEPGRDPVSDLDVIEGELIAHGG-LEDRPRLVVLNKVDVPDAADLADIIFDDVA 304 Query: 299 QCGQVPFEFSSITGHGI 315 + G F S+ +G G+ Sbjct: 305 ERGWPVFRVSTKSGEGL 321 >gi|282854189|ref|ZP_06263526.1| Obg family GTPase CgtA [Propionibacterium acnes J139] gi|282583642|gb|EFB89022.1| Obg family GTPase CgtA [Propionibacterium acnes J139] gi|314966941|gb|EFT11040.1| Obg family GTPase CgtA [Propionibacterium acnes HL082PA2] gi|314981282|gb|EFT25376.1| Obg family GTPase CgtA [Propionibacterium acnes HL110PA3] gi|315091756|gb|EFT63732.1| Obg family GTPase CgtA [Propionibacterium acnes HL110PA4] gi|315103213|gb|EFT75189.1| Obg family GTPase CgtA [Propionibacterium acnes HL050PA2] gi|327327762|gb|EGE69538.1| Spo0B-associated GTP-binding protein [Propionibacterium acnes HL103PA1] Length = 505 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 129/317 (40%), Positives = 191/317 (60%), Gaps = 5/317 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A + +G GG G S +REKF GGPDGG+GG GG V ++ + TL+D+ +Q Sbjct: 6 FVDRATLTAVAGKGGHGCASVKREKFKPLGGPDGGNGGHGGSVILRVDPQVTTLVDYHWQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 KA +GE G N++GA G D++L VP GT V + D L+ DL G +++A GG Sbjct: 66 STRKATNGESGRGDNQAGANGSDMILAVPEGTVVSDADTGELLGDLVGVGAELVVAAGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA +S +AP +A G G+E+ I L+LK++ADIG++G P+AGKS+ +A+++RA Sbjct: 126 GGLGNAALANSARKAPGFALLGEAGEERKILLELKVVADIGLVGFPSAGKSSLIAAISRA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A G G+G FL+H ER ++H Sbjct: 186 KPKIADYPFTTLVPNLGVVVAGETTYTVADVPGLIPGASLGKGLGFDFLRHIERCRAIVH 245 Query: 243 IVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + + I EL A+ L + +V L+++D D+ LA + Sbjct: 246 VIDCATYEPGRDPVSDLDVIEGELIAHGG-LEDRPRLVVLNKVDVPDAADLADIVFDDVA 304 Query: 299 QCGQVPFEFSSITGHGI 315 + G F S+ +G G+ Sbjct: 305 ERGWPVFRVSTKSGEGL 321 >gi|223889454|ref|ZP_03624040.1| GTP-binding protein Obg/CgtA [Borrelia burgdorferi 64b] gi|223885140|gb|EEF56244.1| GTP-binding protein Obg/CgtA [Borrelia burgdorferi 64b] Length = 328 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 119/280 (42%), Positives = 178/280 (63%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + SG+GG+G +SF REKF GGPDGG+GG GG V + NL+TL ++ Sbjct: 4 FKDSVNITVVSGNGGSGCVSFLREKFNAKGGPDGGNGGSGGSVIFKVRENLSTLSFYKNG 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 A++G+ GM RSGA G+D+ L VP T+V+ E+ +L+ L ++ GG Sbjct: 64 HVLCAENGKPGMGFKRSGANGKDLTLFVPPNTEVYNENDGTLLYRLKNLNDEFVVLKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FK+S + P +A PG G + L+L L+ADIG++GLPNAGKS+ L +T A Sbjct: 124 GGLGNWNFKTSVRRVPRFAQPGESGNSLSVRLELFLVADIGLVGLPNAGKSSLLNRITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 K ++A+YPFTT P+LG+++ Y + I+ADIPGIIK A G G+G +FLKH +T +L Sbjct: 184 KSRVANYPFTTKIPHLGMLRRSYDDLIIADIPGIIKGASFGVGLGTKFLKHIAKTKILAL 243 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 ++ E N +Y +L+EL +Y+ +L K +I+ +++D Sbjct: 244 VIDISEANFLESYNILLNELKSYSYKLFNKKKIIIANKLD 283 >gi|297160535|gb|ADI10247.1| GTPase ObgE [Streptomyces bingchenggensis BCW-1] Length = 477 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 134/325 (41%), Positives = 200/325 (61%), Gaps = 16/325 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G+GG G S REKF GGPDGG+GGRGGDV + ++ TL+D+ + Sbjct: 4 FVDRVELHVAAGNGGHGCASVHREKFKPLGGPDGGNGGRGGDVILVVDQSVTTLLDYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG G D+VL VP GT V + G +++ DL EG + A GG Sbjct: 64 PHRKATNGKPGEGGNRSGKDGTDLVLPVPDGTVVLDTQG-NVLADLVGEGTTFVAAQGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G + L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALASARRKAPGFALLGEPGHAGDVVLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGSTVYTIADVPGLIPGASQGKGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SALEENVQAAYQCILDELSAYNSELRK------KIEIVGLSQIDTVDSDTLAR-KK 293 ++ +ALE + L +L +ELR+ + +V L+++D D LA + Sbjct: 243 VLDTAALESE-----RDPLTDLDVIEAELREYGGLENRPRLVALNKVDVPDGQDLADIIR 297 Query: 294 NELATQCGQVPFEFSSITGHGIPQI 318 +L + QV FE S+++ HG+ ++ Sbjct: 298 PDLEARGYQV-FEVSAVSRHGLKEL 321 >gi|224531619|ref|ZP_03672251.1| GTP-binding protein Obg/CgtA [Borrelia valaisiana VS116] gi|224511084|gb|EEF81490.1| GTP-binding protein Obg/CgtA [Borrelia valaisiana VS116] Length = 328 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 121/285 (42%), Positives = 181/285 (63%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + SG+GG+G +SF REKF GGPDGG+GG GG V + NL TL ++ Sbjct: 4 FKDSVSITVVSGNGGSGCVSFLREKFNAKGGPDGGNGGNGGSVIFKVRENLCTLSFYKNG 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 A++G+ GM RSGA G+D++L VP T ++ E+ +L+ L ++ GG Sbjct: 64 HVLCAENGKPGMGFKRSGANGKDLILFVPPNTGIYNENDGTLLYRLKDLTDEFVILKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FK+S +AP +A PG G + L+L L+ADIG++GLPNAGKS+ L +T A Sbjct: 124 GGLGNWNFKTSVRRAPRFAQPGESGNSLNVRLELFLVADIGLVGLPNAGKSSLLNRITSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 K ++A+YPFTT P+LGI++ + + I+ADIPGIIK A G G+G +FLKH +T +L Sbjct: 184 KSRVANYPFTTKIPHLGILRYSWDDLIIADIPGIIKGASFGVGLGTKFLKHIAKTKILAL 243 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 ++ E N +Y +L+EL +Y+ EL K +I+ +++D +S+ Sbjct: 244 VIDISEANFLESYNILLNELKSYSYELFNKKKIIVANKLDLDNSN 288 >gi|313815725|gb|EFS53439.1| Obg family GTPase CgtA [Propionibacterium acnes HL059PA1] gi|315098338|gb|EFT70314.1| Obg family GTPase CgtA [Propionibacterium acnes HL059PA2] Length = 505 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 129/317 (40%), Positives = 191/317 (60%), Gaps = 5/317 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A + +G GG G S +REKF GGPDGG+GG GG V ++ + TL+D+ +Q Sbjct: 6 FVDRATLTAVAGKGGHGCASVKREKFKPLGGPDGGNGGHGGSVILRVDPQVTTLVDYHWQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 KA +GE G N++GA G D++L VP GT V + D L+ DL G +++A GG Sbjct: 66 STRKATNGESGRGDNQAGANGSDMILAVPEGTVVSDADTGELLGDLVGVGAELVVAAGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA +S +AP +A G G+E+ I L+LK++ADIG++G P+AGKS+ +A+++RA Sbjct: 126 GGLGNAALANSARKAPGFALLGEAGEERKILLELKVVADIGLVGFPSAGKSSLIAAISRA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A G G+G FL+H ER ++H Sbjct: 186 KPKIADYPFTTLVPNLGVVVAGETTYTVADVPGLIPGASVGKGLGFDFLRHIERCRAIVH 245 Query: 243 IVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + + I EL A+ L + +V L+++D D+ LA + Sbjct: 246 VIDCATYEPGRDPVSDLDVIEGELIAHGG-LEDRPRLVVLNKVDVPDAADLADIIFDDVA 304 Query: 299 QCGQVPFEFSSITGHGI 315 + G F S+ +G G+ Sbjct: 305 ERGWPVFRVSTKSGEGL 321 >gi|295130403|ref|YP_003581066.1| Obg family GTPase CgtA [Propionibacterium acnes SK137] gi|291377156|gb|ADE01011.1| Obg family GTPase CgtA [Propionibacterium acnes SK137] gi|313764658|gb|EFS36022.1| Obg family GTPase CgtA [Propionibacterium acnes HL013PA1] gi|313791707|gb|EFS39818.1| Obg family GTPase CgtA [Propionibacterium acnes HL110PA1] gi|313802209|gb|EFS43441.1| Obg family GTPase CgtA [Propionibacterium acnes HL110PA2] gi|313807318|gb|EFS45805.1| Obg family GTPase CgtA [Propionibacterium acnes HL087PA2] gi|313809825|gb|EFS47546.1| Obg family GTPase CgtA [Propionibacterium acnes HL083PA1] gi|313813135|gb|EFS50849.1| Obg family GTPase CgtA [Propionibacterium acnes HL025PA1] gi|313818364|gb|EFS56078.1| Obg family GTPase CgtA [Propionibacterium acnes HL046PA2] gi|313820126|gb|EFS57840.1| Obg family GTPase CgtA [Propionibacterium acnes HL036PA1] gi|313823065|gb|EFS60779.1| Obg family GTPase CgtA [Propionibacterium acnes HL036PA2] gi|313825659|gb|EFS63373.1| Obg family GTPase CgtA [Propionibacterium acnes HL063PA1] gi|313827903|gb|EFS65617.1| Obg family GTPase CgtA [Propionibacterium acnes HL063PA2] gi|313830738|gb|EFS68452.1| Obg family GTPase CgtA [Propionibacterium acnes HL007PA1] gi|313833956|gb|EFS71670.1| Obg family GTPase CgtA [Propionibacterium acnes HL056PA1] gi|313838536|gb|EFS76250.1| Obg family GTPase CgtA [Propionibacterium acnes HL086PA1] gi|314915153|gb|EFS78984.1| Obg family GTPase CgtA [Propionibacterium acnes HL005PA4] gi|314918393|gb|EFS82224.1| Obg family GTPase CgtA [Propionibacterium acnes HL050PA1] gi|314919882|gb|EFS83713.1| Obg family GTPase CgtA [Propionibacterium acnes HL050PA3] gi|314925354|gb|EFS89185.1| Obg family GTPase CgtA [Propionibacterium acnes HL036PA3] gi|314931897|gb|EFS95728.1| Obg family GTPase CgtA [Propionibacterium acnes HL067PA1] gi|314955760|gb|EFT00160.1| Obg family GTPase CgtA [Propionibacterium acnes HL027PA1] gi|314958245|gb|EFT02348.1| Obg family GTPase CgtA [Propionibacterium acnes HL002PA1] gi|314960200|gb|EFT04302.1| Obg family GTPase CgtA [Propionibacterium acnes HL002PA2] gi|314963006|gb|EFT07106.1| Obg family GTPase CgtA [Propionibacterium acnes HL082PA1] gi|314973164|gb|EFT17260.1| Obg family GTPase CgtA [Propionibacterium acnes HL053PA1] gi|314976334|gb|EFT20429.1| Obg family GTPase CgtA [Propionibacterium acnes HL045PA1] gi|314978186|gb|EFT22280.1| Obg family GTPase CgtA [Propionibacterium acnes HL072PA2] gi|314983458|gb|EFT27550.1| Obg family GTPase CgtA [Propionibacterium acnes HL005PA1] gi|314987650|gb|EFT31741.1| Obg family GTPase CgtA [Propionibacterium acnes HL005PA2] gi|314990130|gb|EFT34221.1| Obg family GTPase CgtA [Propionibacterium acnes HL005PA3] gi|315077651|gb|EFT49707.1| Obg family GTPase CgtA [Propionibacterium acnes HL053PA2] gi|315084517|gb|EFT56493.1| Obg family GTPase CgtA [Propionibacterium acnes HL027PA2] gi|315085854|gb|EFT57830.1| Obg family GTPase CgtA [Propionibacterium acnes HL002PA3] gi|315088729|gb|EFT60705.1| Obg family GTPase CgtA [Propionibacterium acnes HL072PA1] gi|315096359|gb|EFT68335.1| Obg family GTPase CgtA [Propionibacterium acnes HL038PA1] gi|315100967|gb|EFT72943.1| Obg family GTPase CgtA [Propionibacterium acnes HL046PA1] gi|327332137|gb|EGE73874.1| Spo0B-associated GTP-binding protein [Propionibacterium acnes HL096PA3] gi|327442757|gb|EGE89411.1| Obg family GTPase CgtA [Propionibacterium acnes HL013PA2] gi|327446128|gb|EGE92782.1| Obg family GTPase CgtA [Propionibacterium acnes HL043PA2] gi|327447893|gb|EGE94547.1| Obg family GTPase CgtA [Propionibacterium acnes HL043PA1] gi|327450980|gb|EGE97634.1| Obg family GTPase CgtA [Propionibacterium acnes HL087PA3] gi|327452941|gb|EGE99595.1| Obg family GTPase CgtA [Propionibacterium acnes HL092PA1] gi|327453671|gb|EGF00326.1| Obg family GTPase CgtA [Propionibacterium acnes HL083PA2] gi|328753668|gb|EGF67284.1| Obg family GTPase CgtA [Propionibacterium acnes HL020PA1] gi|328754404|gb|EGF68020.1| Obg family GTPase CgtA [Propionibacterium acnes HL087PA1] gi|328755002|gb|EGF68618.1| Obg family GTPase CgtA [Propionibacterium acnes HL025PA2] gi|328760509|gb|EGF74077.1| Spo0B-associated GTP-binding protein [Propionibacterium acnes HL099PA1] Length = 505 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 129/317 (40%), Positives = 191/317 (60%), Gaps = 5/317 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A + +G GG G S +REKF GGPDGG+GG GG V ++ + TL+D+ +Q Sbjct: 6 FVDRATLTAVAGKGGHGCASVKREKFKPLGGPDGGNGGHGGSVILRVDPQVTTLVDYHWQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 KA +GE G N++GA G D++L VP GT V + D L+ DL G +++A GG Sbjct: 66 STRKATNGESGRGDNQAGANGSDMILAVPEGTVVSDADTGELLGDLVGVGAELVVAAGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA +S +AP +A G G+E+ I L+LK++ADIG++G P+AGKS+ +A+++RA Sbjct: 126 GGLGNAALANSARKAPGFALLGEAGEERKILLELKVVADIGLVGFPSAGKSSLIAAISRA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A G G+G FL+H ER ++H Sbjct: 186 KPKIADYPFTTLVPNLGVVVAGETTYTVADVPGLIPGASVGKGLGFDFLRHIERCRAIVH 245 Query: 243 IVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + + I EL A+ L + +V L+++D D+ LA + Sbjct: 246 VIDCATYEPGRDPVSDLDVIEGELIAHGG-LEDRPRLVVLNKVDVPDAADLADIIFDDVA 304 Query: 299 QCGQVPFEFSSITGHGI 315 + G F S+ +G G+ Sbjct: 305 ERGWPVFRVSTKSGEGL 321 >gi|119953556|ref|YP_945766.1| GTPase ObgE [Borrelia turicatae 91E135] gi|261266685|sp|A1R0K4|OBG_BORT9 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|119862327|gb|AAX18095.1| GTP-binding protein CgtA [Borrelia turicatae 91E135] Length = 327 Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 115/280 (41%), Positives = 179/280 (63%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + SG GGAG +SF RE+F GGPDGG GGRGG+V + +L TL ++ Sbjct: 4 FKDSLNITVSSGSGGAGCVSFLRERFKAKGGPDGGDGGRGGNVVFKVKPDLKTLSFYKNG 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 Q A +G+ GM +SGA GED+V+ VP T+V++ S++ +L +I GG Sbjct: 64 QKLAANNGKPGMGSRKSGASGEDLVIFVPPNTRVYDVFTDSMLFELQNFDDEVIALKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +FKSST + P +A PG G + L+L LIADIG++GLPNAGKS+ ++++T + Sbjct: 124 GGLGNVNFKSSTKRTPRFAQPGESGTTLDLRLELVLIADIGLVGLPNAGKSSLISTITAS 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 + K+ +YPFTT P+LG++K Y++ ++AD+PGII+ A +G G+G FL+H +T +L+ Sbjct: 184 RSKVGNYPFTTKVPHLGVLKSSYEDLVIADVPGIIEGASRGMGLGFEFLRHISKTKILVF 243 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 ++ + + Y +++ELS Y+ L K I+ +++D Sbjct: 244 LIDVASNDFMSTYSILVNELSVYDVGLSSKKRIIVANKLD 283 >gi|262201998|ref|YP_003273206.1| GTP-binding protein Obg/CgtA [Gordonia bronchialis DSM 43247] gi|262085345|gb|ACY21313.1| GTP-binding protein Obg/CgtA [Gordonia bronchialis DSM 43247] Length = 488 Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 138/344 (40%), Positives = 195/344 (56%), Gaps = 18/344 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++ +G+GG G S REKF GGPDGG+GG GG V + ++TL+DF + Sbjct: 3 RFVDRVTIHVAAGNGGHGCASVHREKFKPLGGPDGGNGGNGGSVRLVVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H KA +G G NR GA GED+VL VP GT V + DG S++ DL G A GG Sbjct: 63 RPHAKAGNGRPGAGDNRDGATGEDLVLHVPDGTVVLDADG-SIVADLVGAGTTFEAAQGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+ + + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 RGGLGNAALASKARKAPGFALLGEEGEHRDLVLELKSVADVGLVGFPSAGKSSLVSVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V+ F +AD+PG+I A G G+G FL+H ER +L Sbjct: 182 AKPKIADYPFTTLVPNLGVVQTAGDVFTIADVPGLIPGASTGRGLGLEFLRHLERCALLA 241 Query: 242 HIV---------------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 H+V ALE + AAYQ LD +L + +V L++ID D+ Sbjct: 242 HVVDCATLEPGRDPVSDIDALEAEL-AAYQPALDADHGLG-DLADRPRVVILNKIDVPDA 299 Query: 287 DTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 LA Q G F S++T G+ ++ L + R Sbjct: 300 ADLADLVEPELAQRGWSVFRISAVTHQGLRELTFALARMVREYR 343 >gi|327325992|gb|EGE67782.1| Spo0B-associated GTP-binding protein [Propionibacterium acnes HL096PA2] Length = 505 Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 129/317 (40%), Positives = 190/317 (59%), Gaps = 5/317 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A + +G GG G S +REKF GGPDGG+GG GG V ++ + TL+D+ +Q Sbjct: 6 FVDRATLTAVAGKGGHGCASVKREKFKPLGGPDGGNGGHGGSVILRVDPQVTTLVDYHWQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 KA +GE G N++GA G D++L VP GT V + D L+ DL G +++A GG Sbjct: 66 STRKATNGESGRGDNQAGANGSDMILAVPEGTVVSDADTGELLGDLVGVGAELVVAAGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA +S +AP +A G G+E+ I L+LK++ADIG++G P+AGKS+ +A+++RA Sbjct: 126 GGLGNAALANSARKAPGFALLGEAGEERKILLELKVVADIGLVGFPSAGKSSLIAAISRA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A G G+G FL+H ER ++H Sbjct: 186 KPKIADYPFTTLVPNLGVVVAGETTYTVADVPGLIPGASVGKGLGFDFLRHIERCRAIVH 245 Query: 243 IVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + + I EL A+ L + +V L ++D D+ LA + Sbjct: 246 VIDCATYEPGRDPVSDLDVIEGELIAHGG-LEDRPRLVVLDKVDVPDAADLADIIFDDVA 304 Query: 299 QCGQVPFEFSSITGHGI 315 + G F S+ +G G+ Sbjct: 305 ERGWPVFRVSTKSGEGL 321 >gi|291296601|ref|YP_003507999.1| GTP-binding protein Obg/CgtA [Meiothermus ruber DSM 1279] gi|290471560|gb|ADD28979.1| GTP-binding protein Obg/CgtA [Meiothermus ruber DSM 1279] Length = 416 Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 207/320 (64%), Gaps = 3/320 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D ++ + +G GG G ISF REK+I GGPDGG GG GG V ++A + +++L + + Sbjct: 2 FRDVLEISVAAGRGGDGCISFWREKYIAKGGPDGGDGGDGGSVILRALAQVDSLSNLS-K 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +KA++G+ GM + G G+D+++ VP GT+V++ + L+ DL +EGQ + A GG Sbjct: 61 RVYKAENGQHGMGKGLFGKSGKDLIIEVPRGTRVYDAETGELLADLVEEGQTFVAARGGR 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GN F + T QAP +A G G+++ + L+L L+AD+G++G PNAGKS+ LA++T A Sbjct: 121 GGWGNPRFVTPTRQAPRFAEAGEEGEKRKLRLELMLLADVGLVGYPNAGKSSLLAALTHA 180 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 PKIA YPFTTL PNLG+++ + +ADIPGII+ A QG G+G FL+H RT VLL+ Sbjct: 181 TPKIASYPFTTLSPNLGVIERDLERITMADIPGIIEGAAQGRGLGLEFLRHIARTRVLLY 240 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQ 302 ++ ++ VQ + + EL AYN EL ++ ++ L++ D + + + EL ++ G Sbjct: 241 VLDGADQPVQTLH-TLQAELRAYNPELLQRQALIALNKTDLLTPEEVQTLVGEL-SRTGL 298 Query: 303 VPFEFSSITGHGIPQILECL 322 S+ + G+P+++E L Sbjct: 299 PVLPISTQSKAGLPELVEAL 318 >gi|213693149|ref|YP_002323735.1| GTP1/OBG sub domain protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|261266679|sp|B7GNK1|OBG_BIFLI RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|213524610|gb|ACJ53357.1| GTP1/OBG sub domain protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459329|dbj|BAJ69950.1| GTPase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 563 Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 133/351 (37%), Positives = 202/351 (57%), Gaps = 21/351 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+++ GDGG G RREK+ GP+GG+GG GG V A N +L+D+R+ Sbjct: 4 FVDRVTVHVKGGDGGNGSAGIRREKYKPLAGPNGGNGGDGGSVVFVADRNATSLLDYRFM 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI--------SLICDLDQEGQR 114 H A G G+ N+ G+KGED++L VP GT VFE G + + DL EG R Sbjct: 64 PHRVAGSGTMGLGDNKDGSKGEDLILPVPCGTVVFEARGEQGKAKHPGAQLADLRHEGDR 123 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 ++A GG GG GN + T +AP +A G LG+E+ + L+LK IAD+ ++G P+AGKS+ Sbjct: 124 CVVAQGGAGGLGNIALANKTRRAPGFALLGELGEERDVILELKSIADVALVGFPSAGKSS 183 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +A+++ AKPKIADYPFTTL PNLG+V G + +AD+PG+I A +G G+G FL+H Sbjct: 184 LIAAMSSAKPKIADYPFTTLVPNLGVVIAGDSRYTIADVPGLIPGASEGKGLGLEFLRHI 243 Query: 235 ERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + + + Y + +EL+ Y +L ++ IV L++I Sbjct: 244 ERTEIIAHVIDCATLEPDRDPMSDYHALENELALYADKLELPLGAIPIPERPRIVILNKI 303 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 D ++ LA + G FE S+ + G+ ++ L + +R E Sbjct: 304 DVPEAKELAEFVRPEFERLGLKVFEISTASHEGLKELNFALSALVHEMREE 354 >gi|62184838|ref|YP_219623.1| GTPase ObgE [Chlamydophila abortus S26/3] gi|81312985|sp|Q5L6R9|OBG_CHLAB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|62147905|emb|CAH63652.1| putative GTP-binding protein [Chlamydophila abortus S26/3] Length = 335 Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 132/339 (38%), Positives = 205/339 (60%), Gaps = 22/339 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +R+G GG G +++R+EK++ GGP GG+GG GG + I++ +++ + +R Sbjct: 2 FLDQITIELRAGKGGNGVVAWRKEKYLPKGGPYGGNGGVGGSIIIESATHVYSFESYRNI 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KA+ G G NRSG G+D+VL VP GT + + + ++ D + G+R+++ GG Sbjct: 62 RFLKAEDGRPGATNNRSGKNGKDLVLIVPEGTLLRDVETKEILYDFAKSGERLVVCRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK+STN+AP A PG G+ + + L+LKLIADIG++G PNAGKST ++ R Sbjct: 122 GGKGNTFFKTSTNRAPTKATPGKPGEIRQVELELKLIADIGLVGFPNAGKSTLFNTLART 181 Query: 183 KPKIADYPFTTLYPNLGIV----KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 + K+ YPFTTL P LG+V K K +I+ADIPGII+ AHQ G+G FL+H ERT Sbjct: 182 EVKVGAYPFTTLQPVLGLVPCQEKLYQKPWIIADIPGIIEGAHQNRGLGLDFLRHIERTR 241 Query: 239 VLLHIV-------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 +LL ++ S+ EE++ + ++DEL Y +L K I+ L++ID + D Sbjct: 242 LLLFVIDICGCERSSPEEDL----RILMDELVHYREDLADKNRIIALNKIDDLLPD---E 294 Query: 292 KKNELATQCGQVPFE----FSSITGHGIPQILECLHDKI 326 ++ L + P E S +TG G+ + +K+ Sbjct: 295 RQERLESFQKLFPSETFVLVSGLTGEGVDLLNSLFTNKL 333 >gi|134098002|ref|YP_001103663.1| GTPase ObgE [Saccharopolyspora erythraea NRRL 2338] gi|291007233|ref|ZP_06565206.1| GTPase ObgE [Saccharopolyspora erythraea NRRL 2338] gi|261263062|sp|A4F9L3|OBG_SACEN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|133910625|emb|CAM00738.1| probable GTP-binding protein, GTP1/Obg family [Saccharopolyspora erythraea NRRL 2338] Length = 492 Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 137/347 (39%), Positives = 199/347 (57%), Gaps = 18/347 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++ +GDGG G S REK+ GGPDGG+GGRGGDV + ++TL+DF + Sbjct: 7 RFVDRVTIHVAAGDGGNGCASVHREKYKPLGGPDGGNGGRGGDVRLVVDPGVHTLLDFHH 66 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H +A +G++G R+GA GED+VL VP GT V DG ++ DL G + A GG Sbjct: 67 RPHARASNGKQGRGSMRNGAIGEDLVLPVPEGTVVLTPDG-EVLADLVGVGTTFVAAQGG 125 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G E + L+LK +AD G++G P+AGKS+ ++ ++ Sbjct: 126 RGGLGNAALSSKARRAPGFALLGEPGDEHDLVLELKSVADAGLVGFPSAGKSSLISVLSA 185 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A +G G+G FL+H ER VL+ Sbjct: 186 AKPKIADYPFTTLVPNLGVVTAGDTVFTVADVPGLIPGASEGRGLGLDFLRHIERCAVLV 245 Query: 242 HI---------------VSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 H+ V ALEE + + E A + E R + +V L+++D ++ Sbjct: 246 HVVDCATQEPGRDPLSDVDALEEELARYTPALKTEHGAGDLESRPR--LVVLNKMDVPEA 303 Query: 287 DTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 LA Q G FE S+ + G+ ++ L + + R E Sbjct: 304 RELAELVRPELAQRGWPVFEVSTASHEGLRELRFALAEAVEEYRAEQ 350 >gi|329942520|ref|ZP_08291330.1| GTP-binding protein Obg/CgtA [Chlamydophila psittaci Cal10] gi|332287153|ref|YP_004422054.1| GTPase [Chlamydophila psittaci 6BC] gi|313847748|emb|CBY16738.1| putative GTP-binding protein [Chlamydophila psittaci RD1] gi|325506506|gb|ADZ18144.1| GTPase [Chlamydophila psittaci 6BC] gi|328815430|gb|EGF85418.1| GTP-binding protein Obg/CgtA [Chlamydophila psittaci Cal10] gi|328914397|gb|AEB55230.1| GTP-binding protein, GTP1/OBG family [Chlamydophila psittaci 6BC] Length = 335 Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 132/339 (38%), Positives = 206/339 (60%), Gaps = 22/339 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +R+G GG G +++R+EK++ GGP GG+GG GG + I++ +++ + +R Sbjct: 2 FLDQITIELRAGKGGNGVVAWRKEKYLPKGGPYGGNGGVGGSIIIESATHVYSFESYRNI 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KA+ G G NRSG G+D+VL VP GT + + + ++ D + G+R+++ GG Sbjct: 62 RFLKAEDGRPGATNNRSGKNGKDLVLIVPEGTLLRDVETKEILHDFAKSGERLVVCRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK+STN+AP A PG G+ + + L+LKLIADIG++G PNAGKST ++ R Sbjct: 122 GGKGNTFFKTSTNRAPTKATPGKPGEIRQVELELKLIADIGLVGFPNAGKSTLFNTLART 181 Query: 183 KPKIADYPFTTLYPNLGIV----KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 + K+ YPFTTL P LG+V K K +I+ADIPGII+ AHQ G+G FL+H ERT Sbjct: 182 EVKVGAYPFTTLQPVLGLVPCQEKLYQKPWIIADIPGIIEGAHQNRGLGLDFLRHIERTR 241 Query: 239 VLLHIV-------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 +LL ++ S+ EE++ + ++DEL Y ++L K I+ L++ID + D Sbjct: 242 LLLFVIDICGCERSSPEEDL----RILMDELVHYRADLADKNRIIALNKIDDLLPD---E 294 Query: 292 KKNELATQCGQVPFE----FSSITGHGIPQILECLHDKI 326 ++ L + P E S +TG G+ + +K+ Sbjct: 295 RQERLESFQKLFPSEQFVLVSGLTGEGVDLLNSLFTNKL 333 >gi|23465846|ref|NP_696449.1| GTPase ObgE [Bifidobacterium longum NCC2705] gi|227547012|ref|ZP_03977061.1| spo0B-associated GTP-binding protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239620889|ref|ZP_04663920.1| GTP-binding protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312133801|ref|YP_004001140.1| nbg [Bifidobacterium longum subsp. longum BBMN68] gi|317482956|ref|ZP_07941960.1| obg family GTPase CgtA [Bifidobacterium sp. 12_1_47BFAA] gi|322690001|ref|YP_004209735.1| GTPase [Bifidobacterium longum subsp. infantis 157F] gi|322691935|ref|YP_004221505.1| GTPase [Bifidobacterium longum subsp. longum JCM 1217] gi|81753803|sp|Q8G4U0|OBG_BIFLO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|23326544|gb|AAN25085.1| GTP-binding protein [Bifidobacterium longum NCC2705] gi|227212544|gb|EEI80433.1| spo0B-associated GTP-binding protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239516150|gb|EEQ56017.1| GTP-binding protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291516538|emb|CBK70154.1| Obg family GTPase CgtA [Bifidobacterium longum subsp. longum F8] gi|311773086|gb|ADQ02574.1| Nbg [Bifidobacterium longum subsp. longum BBMN68] gi|316915563|gb|EFV36981.1| obg family GTPase CgtA [Bifidobacterium sp. 12_1_47BFAA] gi|320456791|dbj|BAJ67413.1| GTPase [Bifidobacterium longum subsp. longum JCM 1217] gi|320461337|dbj|BAJ71957.1| GTPase [Bifidobacterium longum subsp. infantis 157F] Length = 563 Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 133/351 (37%), Positives = 202/351 (57%), Gaps = 21/351 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+++ GDGG G RREK+ GP+GG+GG GG V A N +L+D+R+ Sbjct: 4 FVDRVTVHVKGGDGGNGSAGIRREKYKPLAGPNGGNGGDGGSVVFVADRNATSLLDYRFM 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI--------SLICDLDQEGQR 114 H A G G+ N+ G+KGED++L VP GT VFE G + + DL EG R Sbjct: 64 PHRVAGSGTMGLGDNKDGSKGEDLILPVPCGTVVFEARGEQGKAKHPGAQLADLRHEGDR 123 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 ++A GG GG GN + T +AP +A G LG+E+ + L+LK IAD+ ++G P+AGKS+ Sbjct: 124 CVVAQGGAGGLGNIALANKTRRAPGFALLGELGEERDVILELKSIADVALVGFPSAGKSS 183 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +A+++ AKPKIADYPFTTL PNLG+V G + +AD+PG+I A +G G+G FL+H Sbjct: 184 LIAAMSSAKPKIADYPFTTLVPNLGVVIAGDSRYTIADVPGLIPGASEGKGLGLEFLRHI 243 Query: 235 ERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + + + Y + +EL+ Y +L ++ IV L++I Sbjct: 244 ERTEIIAHVIDCATLEPDRDPMSDYHALENELALYADKLELPLGAIPIPERPRIVILNKI 303 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 D ++ LA + G FE S+ + G+ ++ L + +R E Sbjct: 304 DVPEAKELAEFVRPEFEKLGLKVFEISTASHEGLKELNFALSALVHEMREE 354 >gi|332522688|ref|ZP_08398940.1| Obg family GTPase CgtA [Streptococcus porcinus str. Jelinkova 176] gi|332313952|gb|EGJ26937.1| Obg family GTPase CgtA [Streptococcus porcinus str. Jelinkova 176] Length = 435 Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 136/329 (41%), Positives = 206/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ + +G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 2 FLDTAKISVHAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDFRYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GEKGM + G ED+++ VP GT V + + +I DL + GQ I+A GG Sbjct: 62 RKFKAKAGEKGMTKGMHGRGSEDLIVPVPQGTTVKDAETGKVITDLVENGQEYIVAHGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNIRFATPRNPAPEIAENGEPGEERDLELELKILADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGIGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D ++ + L K +LA Sbjct: 242 HVIDMSASEGRDPYEDYVSINNELETYNLRLLERPQIIVANKMDMPEAEENLKAFKEKLA 301 Query: 298 T---QCGQVP--FEFSSITGHGIPQILEC 321 + ++P F S++ G+ +++ Sbjct: 302 ADYDEFDELPKVFPVSTLAKQGLDNLMDA 330 >gi|315108303|gb|EFT80279.1| Obg family GTPase CgtA [Propionibacterium acnes HL030PA2] Length = 505 Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 129/317 (40%), Positives = 190/317 (59%), Gaps = 5/317 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A + +G GG G S +REKF GGPDGG+GG GG V ++ + TL+D+ +Q Sbjct: 6 FVDRATLTAVAGKGGHGCASVKREKFKPLGGPDGGNGGHGGSVILRVDPQVTTLVDYHWQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 KA +GE G N++GA G D++L VP GT V + D L+ DL G +++A GG Sbjct: 66 STRKATNGESGRGDNQAGANGSDMILAVPEGTVVSDADTGELLGDLVGVGAELVVAAGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA +S +AP +A G G+E+ I L+LK++ADIG++G P+AGKS+ +A+++RA Sbjct: 126 GGLGNAALANSARKAPGFALLGEAGEERKILLELKVVADIGLVGFPSAGKSSLIAAISRA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A G G+G FL+H ER ++H Sbjct: 186 KPKIADYPFTTLVPNLGVVVAGETTYTVADVPGLIPGASVGKGLGFDFLRHIERCRAIVH 245 Query: 243 IVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + + I EL A+ L + +V L+++D D LA + Sbjct: 246 VIDCATYEPGRDPVSDLDVIEGELIAHGG-LEDRPRLVVLNKVDVPDPADLADIIFDDVA 304 Query: 299 QCGQVPFEFSSITGHGI 315 + G F S+ +G G+ Sbjct: 305 ERGWPVFRVSTKSGEGL 321 >gi|314923173|gb|EFS87004.1| Obg family GTPase CgtA [Propionibacterium acnes HL001PA1] Length = 505 Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 129/317 (40%), Positives = 191/317 (60%), Gaps = 5/317 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A + +G GG G S +REKF GGPDGG+GG GG V ++ + TL+D+ +Q Sbjct: 6 FVDRATLTAVAGKGGHGCASVKREKFKPLGGPDGGNGGHGGSVILRVDPQVTTLVDYHWQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 KA +GE G N++GA G D++L VP GT V + D L+ DL G +++A GG Sbjct: 66 STRKATNGEYGRGDNQAGANGSDMILAVPEGTVVSDADTGELLGDLVGVGAELVVAAGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA +S +AP +A G G+E+ I L+LK++ADIG++G P+AGKS+ +A+++RA Sbjct: 126 GGLGNAALANSARKAPGFALLGEAGEERKILLELKVVADIGLVGFPSAGKSSLIAAISRA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A G G+G FL+H ER ++H Sbjct: 186 KPKIADYPFTTLVPNLGVVVAGETTYTVADVPGLIPGASLGKGLGFDFLRHIERCRAIVH 245 Query: 243 IVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + + I EL A+ L + +V L+++D D+ LA + Sbjct: 246 VIDCATYEPGRDPVSDLDVIEGELIAHGG-LEDRPRLVVLNKVDVPDAADLADIVFDDVA 304 Query: 299 QCGQVPFEFSSITGHGI 315 + G F S+ +G G+ Sbjct: 305 ERGWPVFRVSTKSGEGL 321 >gi|296454935|ref|YP_003662079.1| GTP1/OBG sub domain-containing protein [Bifidobacterium longum subsp. longum JDM301] gi|296184367|gb|ADH01249.1| GTP1/OBG sub domain protein [Bifidobacterium longum subsp. longum JDM301] Length = 563 Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 133/351 (37%), Positives = 202/351 (57%), Gaps = 21/351 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+++ GDGG G RREK+ GP+GG+GG GG V A N +L+D+R+ Sbjct: 4 FVDRVTVHVKGGDGGNGSAGIRREKYKPLAGPNGGNGGDGGSVVFVADRNATSLLDYRFM 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI--------SLICDLDQEGQR 114 H A G G+ N+ G+KGED++L VP GT VFE G + + DL EG R Sbjct: 64 PHRVAGSGTMGLGDNKDGSKGEDLILPVPCGTVVFEARGEQGKAKHPGAQLADLRHEGDR 123 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 ++A GG GG GN + T +AP +A G LG+E+ + L+LK IAD+ ++G P+AGKS+ Sbjct: 124 CVVAQGGAGGLGNIALANKTRRAPGFALLGELGEERDVILELKSIADVALVGFPSAGKSS 183 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +A+++ AKPKIADYPFTTL PNLG+V G + +AD+PG+I A +G G+G FL+H Sbjct: 184 LIAAMSSAKPKIADYPFTTLVPNLGVVIAGDSRYTIADVPGLIPGASEGKGLGLEFLRHI 243 Query: 235 ERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + + + Y + +EL+ Y +L ++ IV L++I Sbjct: 244 ERTEIIAHVIDCATLEPDRDPMSDYHALENELALYADKLELPLGAIPIPERPRIVILNKI 303 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 D ++ LA + G FE S+ + G+ ++ L + +R E Sbjct: 304 DVPEAKELAEFVRPEFEKLGLKVFEISTASHEGLKELNFALSALVHEMREE 354 >gi|257439638|ref|ZP_05615393.1| Obg family GTPase CgtA [Faecalibacterium prausnitzii A2-165] gi|257197905|gb|EEU96189.1| Obg family GTPase CgtA [Faecalibacterium prausnitzii A2-165] Length = 427 Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 124/279 (44%), Positives = 185/279 (66%), Gaps = 7/279 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A +++ +G GG G +SF REKF+ GGPDGG GGRGGD+ +L+TL+DFRY+ Sbjct: 7 FIDIATIWLHAGKGGDGAVSFHREKFVAAGGPDGGDGGRGGDIIFVVDDHLSTLMDFRYK 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A G KG G E++++ VP+GT + + + +I DL + + +A GG Sbjct: 67 RKYTAPEGGKGGASLCHGKNAENLIIKVPLGTVIKDAESGLVIADL-SDHTPVTIAKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GNAHF + T Q P +A PG+ G++ + L+LKLIAD+G+IG PN GKST +++++ A Sbjct: 126 GGYGNAHFATPTRQIPKFAKPGMPGEDIQVTLELKLIADVGLIGFPNVGKSTLISTISAA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL P LG+V G F+ ADIPG+I+ A +G G+G FL+H ER +LL Sbjct: 186 KPKIANYHFTTLVPTLGVVSVGEGAGFVCADIPGLIEGASEGVGLGHDFLRHVERCRLLL 245 Query: 242 HIV----SALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+V S E V+ ++ I +EL+ ++ EL ++ +IV Sbjct: 246 HVVDVSGSECREPVE-DFEKINEELAKFSPELAQRPQIV 283 >gi|295838921|ref|ZP_06825854.1| GTP-binding protein [Streptomyces sp. SPB74] gi|197695476|gb|EDY42409.1| GTP-binding protein [Streptomyces sp. SPB74] Length = 481 Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 136/333 (40%), Positives = 202/333 (60%), Gaps = 8/333 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G+GG G S REKF GGPDGG+GGRGGDV + ++ TL+D+ + Sbjct: 4 FVDRVELHVAAGNGGHGCASVHREKFKPLGGPDGGNGGRGGDVILVVEQSVTTLLDYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG G+D+VL VP GT V + G +++ DL +G + A GG Sbjct: 64 PHRKATNGKPGEGGNRSGKDGQDLVLPVPDGTVVLDGAG-NVLADLVGQGTSFVAASGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G + L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALSSARRKAPGFALLGEPGDASDLLLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V G F +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 RPKIADYPFTTLVPNLGVVTAGETVFTVADVPGLIPGASQGKGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK-KNELA 297 ++ + LE + + I +EL Y L K+ +V L++ID D LA + +L Sbjct: 243 VLDTATLESDRDPLSDLDVIEEELQQYGG-LNKRPRVVVLNKIDVPDGKDLAEMVRPDLE 301 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 + QV FE S++ G+ ++ L D + R Sbjct: 302 ARGYQV-FEVSAVAHTGLRELSFALGDLVARYR 333 >gi|297199638|ref|ZP_06917035.1| obg family GTPase CgtA [Streptomyces sviceus ATCC 29083] gi|197713434|gb|EDY57468.1| obg family GTPase CgtA [Streptomyces sviceus ATCC 29083] Length = 478 Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 133/334 (39%), Positives = 198/334 (59%), Gaps = 10/334 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G+GG G S REKF GGPDGG+GGRGGDV + ++ TL+D+ + Sbjct: 4 FVDRVELHVAAGNGGHGCASVHREKFKPLGGPDGGNGGRGGDVILTVDQSVTTLLDYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG G+D+VL VP GT V + G +++ DL G + A GG Sbjct: 64 PHRKATNGKPGEGGNRSGKDGQDLVLPVPDGTVVLDRQG-NVLADLVGHGTSYVAAQGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G+ G + I L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALASARRKAPGFALLGVPGDLQDIVLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGDTVYTIADVPGLIPGASQGKGLGLEFLRHVERCSVLVH 242 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRK------KIEIVGLSQIDTVDSDTLARKKNEL 296 + L+ + + + +L +ELR+ + IV L++ID D LA Sbjct: 243 V---LDTATLESDRDPVSDLDIIEAELREYGGLGNRPRIVVLNKIDVPDGKDLAEMVRPD 299 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G FE S++ G+ ++ L D + + R Sbjct: 300 LEARGYRVFEVSAVAHMGLKELSFALADLVGTAR 333 >gi|89898615|ref|YP_515725.1| GTPase ObgE [Chlamydophila felis Fe/C-56] gi|123482893|sp|Q253F8|OBG_CHLFF RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|89331987|dbj|BAE81580.1| GTP-binding protein, GTP1 [Chlamydophila felis Fe/C-56] Length = 335 Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 130/328 (39%), Positives = 200/328 (60%), Gaps = 22/328 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD + +R+G GG G +++R+EK++ GGP GG+GG GG + I++ +++ + +R Sbjct: 2 FLDRITIELRAGKGGNGVVAWRKEKYLPKGGPYGGNGGVGGSIIIESATHVYSFESYRNI 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KA+ G+ G NRSG G+D+VL VP GT + + + ++ D ++G+R+++ GG Sbjct: 62 RFLKAEDGQAGATNNRSGRNGKDLVLVVPEGTLLRDVETQEILYDFTKDGERLVICRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK+STN+AP A PG G+ + + +LKLIADIG++G PNAGKST ++ R Sbjct: 122 GGKGNTFFKTSTNRAPTKATPGKPGEVRQVEFELKLIADIGLVGFPNAGKSTLFNTLART 181 Query: 183 KPKIADYPFTTLYPNLGIV----KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 + ++ YPFTTL P LG+V K K +I+ADIPGII+ AHQ G+G FLKH ERT Sbjct: 182 EVRVGAYPFTTLQPVLGLVPCQEKLYQKPWIIADIPGIIEGAHQNRGLGLDFLKHIERTR 241 Query: 239 VLLHIV-------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 +LL ++ S+ EE++ + ++DEL Y L K I+ L++ID + D Sbjct: 242 LLLFVIDICGCERSSPEEDL----RILIDELLHYKENLADKSRIIALNKIDDLLPD---E 294 Query: 292 KKNELATQCGQVPFE----FSSITGHGI 315 ++ L + P E S +TG G+ Sbjct: 295 RQERLESFQRLFPSEKFVLLSGLTGEGV 322 >gi|23494108|dbj|BAC19076.1| putative GTP-binding protein [Corynebacterium efficiens YS-314] Length = 510 Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 141/330 (42%), Positives = 203/330 (61%), Gaps = 19/330 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++ +GDGG G +S REKF GGPDGG+GG GGD+ ++ + ++TL+DF Y Sbjct: 11 RFIDRVVLHLAAGDGGNGCVSVHREKFKPLGGPDGGNGGHGGDIILEVSPQVHTLLDFHY 70 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H KA G G NRSGA+GED++L VP GT V G +L DL G + I A GG Sbjct: 71 HPHVKAPRGANGAGDNRSGARGEDLILEVPAGTVVLNSKGETL-ADLTTVGMKFIAAAGG 129 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G++ + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 130 QGGLGNAALASRARKAPGFALNGEPGEQHDLILELKSMADVGLVGFPSAGKSSLISVMSA 189 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKI DYPFTTL PNLG+V+ G++ FI+AD+PG+I A +G G+G FL+H ERT VL+ Sbjct: 190 AKPKIGDYPFTTLQPNLGVVEVGHQTFIMADVPGLIPGASEGKGLGLDFLRHIERTSVLV 249 Query: 242 HIVS---------------ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 H+V ALE + AAYQ LDE + +L K+ +V L++ D ++ Sbjct: 250 HVVDTASMDPGRDPISDIEALEAEL-AAYQSALDEDTGLG-DLDKRPRVVVLNKADVPEA 307 Query: 287 DTLAR-KKNELATQCGQVPFEFSSITGHGI 315 LA K ++ Q G F S++ G+ Sbjct: 308 LELAEFLKGDIEQQFGWPVFIVSAVAQRGL 337 >gi|89895909|ref|YP_519396.1| GTPase ObgE [Desulfitobacterium hafniense Y51] gi|122481864|sp|Q24SP0|OBG_DESHY RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|89335357|dbj|BAE84952.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 424 Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 142/321 (44%), Positives = 216/321 (67%), Gaps = 5/321 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+AK+Y++ GDGGAG ++FRREK++ GGP GG GGRGG V A L TL+DFRY+ Sbjct: 2 FYDQAKIYVKGGDGGAGAVAFRREKYVPEGGPSGGDGGRGGKVIFIADEGLRTLVDFRYK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KA GE G +N G GED+ + +PVGT V + D ++ DL + GQ++++A GG Sbjct: 62 RHYKADRGEHGQGKNMHGKSGEDMSVRIPVGTVVKDADTGEILADLIEHGQKVVVANGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F S+TN+AP A G G+E+ + L+LKL+AD+G++G PN GKST ++ ++ A Sbjct: 122 GGRGNARFMSNTNKAPTVAENGEPGEERNLLLELKLLADVGLVGFPNVGKSTIISRISAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADY FTTL PNLG+V+ E + F++ADIPG+I+ AH GAG+G FL+HTERT ++ Sbjct: 182 KPKIADYHFTTLVPNLGVVELEDGESFVVADIPGLIEGAHTGAGLGHEFLRHTERTRLIF 241 Query: 242 HIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H++ + E + +Q I +EL Y+ EL + ++ +++D ++ ++ E Sbjct: 242 HVLDIAGSEERDPLEDFQIIAEELRQYSQELANRPILIVANKMDIPGAEENLQRLTEKLG 301 Query: 299 QCGQVPFEFSSITGHGIPQIL 319 + ++ F S+ TG G+ +++ Sbjct: 302 EDYRI-FPVSAATGEGLKELV 321 >gi|260906324|ref|ZP_05914646.1| GTPase ObgE [Brevibacterium linens BL2] Length = 520 Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 132/331 (39%), Positives = 189/331 (57%), Gaps = 16/331 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D V++ +GDGG G S RREKF GGPDG +GG+GGDV + TL+ + Sbjct: 4 EFIDRVTVHLSAGDGGNGCASIRREKFKPLGGPDGANGGQGGDVKFVVDTQTTTLLPLHH 63 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H A G G R GA G D+V+ VP GT V +DG +I DL + G + A GG Sbjct: 64 RPHLTADDGGIGKGDLRHGADGGDLVIAVPEGTVVKSKDG-EIIADLVEPGTEYVAAAGG 122 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA SS +AP +A G G+ + L+LK IADI ++G P+AGKS+ +A+++ Sbjct: 123 RGGLGNAALASSKRKAPGFALLGEPGEALSLVLELKTIADIALVGYPSAGKSSLIAAMSE 182 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V+ G + +AD+PG+I A +G G+G FL+H ER L+ Sbjct: 183 AKPKIADYPFTTLVPNLGVVQAGDVRYTIADVPGLIPGASEGKGLGLEFLRHVERCAALV 242 Query: 242 HIVS--------------ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 H+V + E+ AAY LD+ S L ++ ++V L+++D D Sbjct: 243 HVVDMATWEPGRDPVSDLTIIESELAAYAVDLDDGSGLLP-LSERPKLVALNKVDIPDGH 301 Query: 288 TLARKKNELATQCGQVPFEFSSITGHGIPQI 318 LA G FE S+++ G+ ++ Sbjct: 302 DLADIVRPDLEAAGYRVFEISAVSHTGLREL 332 >gi|329957119|ref|ZP_08297686.1| Obg family GTPase CgtA [Bacteroides clarus YIT 12056] gi|328523387|gb|EGF50486.1| Obg family GTPase CgtA [Bacteroides clarus YIT 12056] Length = 325 Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 116/263 (44%), Positives = 172/263 (65%), Gaps = 7/263 (2%) Query: 67 AQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFG 126 A HGE G K G GED V+ VP GT V+ + ICD+ + GQ ++L GG GG G Sbjct: 2 AGHGESGSKNRSFGKDGEDKVIEVPCGTVVYNAETGEYICDVTEHGQEVVLLKGGRGGLG 61 Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HFK++T QAP +A PG QE + ++LKL+AD+G++G PNAGKST L++V+ AKPKI Sbjct: 62 NWHFKTATRQAPRFAQPGEPMQEMTVIMELKLLADVGLVGFPNAGKSTLLSAVSSAKPKI 121 Query: 187 ADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 A+YPFTTL PNLGIV ++G K F++ADIPGII+ A G G+G RFL+H ER +LL +V Sbjct: 122 ANYPFTTLEPNLGIVSYRDG-KSFVMADIPGIIEGASAGKGLGLRFLRHIERNSLLLFMV 180 Query: 245 SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP 304 A ++++ Y+ +L+EL +N E+ K ++ +++ D +D + + + L +P Sbjct: 181 PADSDDIRKEYEILLNELRTFNPEMLDKQRVLAITKCDMLDQELMDEIEPTLPE---SIP 237 Query: 305 FEF-SSITGHGIPQILECLHDKI 326 F S+I+G GI + + L +++ Sbjct: 238 HVFISAISGLGISVLKDILWEEL 260 >gi|296111693|ref|YP_003622075.1| GTP-binding protein [Leuconostoc kimchii IMSNU 11154] gi|295833225|gb|ADG41106.1| GTP-binding protein [Leuconostoc kimchii IMSNU 11154] Length = 439 Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 135/337 (40%), Positives = 208/337 (61%), Gaps = 13/337 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D+A++ +++G GG G +SFR EKF GGP GG GG GG + + L TL+DFR Sbjct: 1 MAFVDQAEIEVKAGKGGDGIVSFRHEKFEAMGGPFGGDGGHGGSIIFKVDEGLRTLMDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HFKAQ G G + +GA +D + VP GT V + + ++ DL + GQ +++A G Sbjct: 61 YNRHFKAQPGGNGGTKGMTGASSKDRYIKVPQGTTVTDTETGEILGDLLENGQELVVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F + N AP + G G + + L+LK++AD+G++G P+AGKST L+ V+ Sbjct: 121 GRGGRGNIRFATPANPAPELSENGEPGVIRNLKLELKVLADVGLVGFPSAGKSTLLSVVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPK+A Y FTTL PN+G+V+ + ++F++AD+PG+I+ A QG G+G +FL+H ERT + Sbjct: 181 NAKPKVAAYHFTTLSPNIGMVRLDDERDFVMADLPGLIEGASQGIGLGFQFLRHVERTKL 240 Query: 240 LLHIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE- 295 +LH+V S +E + Y+ ILDEL Y+ + + +IV +++D DS K E Sbjct: 241 VLHLVDMSGIEGTDPYTQYRKILDELQQYDETILDRPQIVVPTKMDMPDSPENLVKFREA 300 Query: 296 ------LATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L++Q VP S++T G+ ++ D + Sbjct: 301 VAADSGLSSQPTIVP--ISALTRDGVQNLMRLTADML 335 >gi|297194396|ref|ZP_06911794.1| GTPase ObgE [Streptomyces pristinaespiralis ATCC 25486] gi|297152255|gb|EFH31621.1| GTPase ObgE [Streptomyces pristinaespiralis ATCC 25486] Length = 608 Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 132/320 (41%), Positives = 195/320 (60%), Gaps = 6/320 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G+GG G S REKF GGPDGG+GGRGGDV + ++ TL+D+ + Sbjct: 4 FVDRVELHVAAGNGGHGCASVHREKFKPLGGPDGGNGGRGGDVILVVDQSVTTLLDYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG G+D+VL VP GT V +++G +++ DL +G + A GG Sbjct: 64 PHRKATNGKPGEGGNRSGKDGQDLVLPVPDGTVVLDKEG-NVLADLVGQGTTFVAAEGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G+ GQ I L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALASARRKAPGFALLGVPGQTGDIVLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGSTVYTIADVPGLIPGASQGRGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + LE + I +EL Y L + IV L+++D D LA Sbjct: 243 VLDTATLESDRDPVSDLDVIEEELRQYGG-LDDRPRIVVLNKVDIPDGQDLADMIRPDLE 301 Query: 299 QCGQVPFEFSSITGHGIPQI 318 G FE S++ G+ ++ Sbjct: 302 GRGYRVFEVSAVAHKGLKEL 321 >gi|161485964|ref|NP_738876.2| GTPase ObgE [Corynebacterium efficiens YS-314] gi|259507884|ref|ZP_05750784.1| GTP-binding protein [Corynebacterium efficiens YS-314] gi|261266905|sp|Q8FN81|OBG_COREF RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|259164518|gb|EEW49072.1| GTP-binding protein [Corynebacterium efficiens YS-314] Length = 502 Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 141/330 (42%), Positives = 203/330 (61%), Gaps = 19/330 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++ +GDGG G +S REKF GGPDGG+GG GGD+ ++ + ++TL+DF Y Sbjct: 3 RFIDRVVLHLAAGDGGNGCVSVHREKFKPLGGPDGGNGGHGGDIILEVSPQVHTLLDFHY 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H KA G G NRSGA+GED++L VP GT V G +L DL G + I A GG Sbjct: 63 HPHVKAPRGANGAGDNRSGARGEDLILEVPAGTVVLNSKGETL-ADLTTVGMKFIAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G++ + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 QGGLGNAALASRARKAPGFALNGEPGEQHDLILELKSMADVGLVGFPSAGKSSLISVMSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKI DYPFTTL PNLG+V+ G++ FI+AD+PG+I A +G G+G FL+H ERT VL+ Sbjct: 182 AKPKIGDYPFTTLQPNLGVVEVGHQTFIMADVPGLIPGASEGKGLGLDFLRHIERTSVLV 241 Query: 242 HIVS---------------ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 H+V ALE + AAYQ LDE + +L K+ +V L++ D ++ Sbjct: 242 HVVDTASMDPGRDPISDIEALEAEL-AAYQSALDEDTGLG-DLDKRPRVVVLNKADVPEA 299 Query: 287 DTLAR-KKNELATQCGQVPFEFSSITGHGI 315 LA K ++ Q G F S++ G+ Sbjct: 300 LELAEFLKGDIEQQFGWPVFIVSAVAQRGL 329 >gi|211908967|gb|ACJ12778.1| CgtA [Vibrio harveyi] Length = 344 Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 120/287 (41%), Positives = 181/287 (63%), Gaps = 8/287 (2%) Query: 45 VWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISL 104 V+IQA NLNTLID+R+Q+ ++A+ GE G N +G +G+D+ L VPVGT+ + + Sbjct: 17 VYIQADENLNTLIDYRFQRFYEAERGENGRGGNCTGKRGKDITLRVPVGTRAVDIHTNEI 76 Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 + ++ + G+++++A GG G GN FKSS N+AP G G+ + I L+L L+AD+G+ Sbjct: 77 VAEVAEHGKKVMVAKGGWHGLGNTRFKSSVNRAPRQRTLGTKGEIREIRLELLLLADVGM 136 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQG 223 +GLPNAGKSTF+ +V+ AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A G Sbjct: 137 LGLPNAGKSTFIRAVSAAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADG 196 Query: 224 AGIGDRFLKHTERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 AG+G RFLKH ER VLLH++ + + +Q A I+DEL Y+ +L K + + Sbjct: 197 AGLGIRFLKHLERCRVLLHMIDIMPIDQSDPIQNAL-TIIDELEQYSEKLAGKPRWLVFN 255 Query: 280 QIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHD 324 + D + + K E+ G F+ S+I +G ++ L D Sbjct: 256 KTDLMPEEEANEKIQEILDALGWEDEYFKISAINRNGTKELCYKLAD 302 >gi|303232627|ref|ZP_07319312.1| Obg family GTPase CgtA [Atopobium vaginae PB189-T1-4] gi|302481113|gb|EFL44188.1| Obg family GTPase CgtA [Atopobium vaginae PB189-T1-4] Length = 501 Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 127/338 (37%), Positives = 207/338 (61%), Gaps = 10/338 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D +++++ GDGGAG SFRRE ++ GGPDGG GG G ++ ++A +++L+ +R++ Sbjct: 6 FTDICRIFVKGGDGGAGCTSFRREAYVPKGGPDGGDGGHGANIILRANPQVSSLVAYRFK 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEED-----GISLICDLDQEGQRIIL 117 HFKA+ G G ++G+ G+D+VL VP+GT V E D + +I D+ G +++ Sbjct: 66 HHFKAERGTHGQGARKAGSDGKDMVLDVPLGTVVREVDPKTKKPLYVIADMCHAGMEVVV 125 Query: 118 APGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 A GG GG GN HF +S ++P ++ G +E I L++KL+AD ++G+P+ GKS+ +A Sbjct: 126 AKGGVGGRGNIHFVTSVRRSPAFSEKGEPAREHEIELEMKLLADAALVGMPSVGKSSIIA 185 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTER 236 ++ A+PKIADYPFTTL PNLG+V+ F++AD+PG+I+ A G G+G +FL+H ER Sbjct: 186 RISAARPKIADYPFTTLTPNLGMVRACSGASFVVADVPGLIEGASCGKGLGHQFLRHIER 245 Query: 237 THVLLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 + V+LH+V + A Y I +EL+AY L ++ ++V ++ D + + Sbjct: 246 SAVILHVVDMTGGFEGRDPVADYHTINNELAAYAPMLAERTQLVIANKCDMLTDTKPIER 305 Query: 293 KNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 A Q G E S++TG G+ +E + + +R Sbjct: 306 LRAAAKQDGFNCIEMSALTGMGVDAAIETIAQVVSRLR 343 >gi|327330693|gb|EGE72439.1| Spo0B-associated GTP-binding protein [Propionibacterium acnes HL097PA1] Length = 505 Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 129/317 (40%), Positives = 191/317 (60%), Gaps = 5/317 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A + +G GG G S +REKF GGPDGG+GG GG V ++ + TL+D+ +Q Sbjct: 6 FVDRATLTAVAGKGGHGCASVKREKFKPLGGPDGGNGGHGGSVILRVDPQVTTLVDYHWQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 KA +GE G N++GA G D++L VP GT V + D L+ DL G +++A GG Sbjct: 66 STRKATNGESGRGDNQAGANGSDMILAVPEGTVVSDADTGELLGDLVGVGAELVVAAGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA +S +AP +A G G+E+ I L+LK++ADIG++G P+AGKS+ +A+++RA Sbjct: 126 GGPGNAALANSARKAPGFALLGEAGEERKILLELKVVADIGLVGFPSAGKSSLIAAISRA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A G G+G FL+H ER ++H Sbjct: 186 KPKIADYPFTTLVPNLGVVVAGETTYTVADVPGLIPGASVGKGLGFDFLRHIERCRAIVH 245 Query: 243 IVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + + I EL A+ L + +V L+++D D+ LA + Sbjct: 246 VIDCATYEPGRDPVSDLDVIEGELIAHGG-LEDRPRLVVLNKVDVPDAADLADIIFDDVA 304 Query: 299 QCGQVPFEFSSITGHGI 315 + G F S+ +G G+ Sbjct: 305 ERGWPVFRVSTKSGEGL 321 >gi|297622276|ref|YP_003703710.1| GTP-binding protein Obg/CgtA [Truepera radiovictrix DSM 17093] gi|297163456|gb|ADI13167.1| GTP-binding protein Obg/CgtA [Truepera radiovictrix DSM 17093] Length = 466 Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 114/285 (40%), Positives = 170/285 (59%), Gaps = 6/285 (2%) Query: 45 VWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISL 104 V ++A ++ +L ++ ++A G +G RNR+GA+GEDVVL VPVGT + D Sbjct: 45 VVLEAIDDVTSLERLVSRRLYRAGTGGQGEGRNRTGARGEDVVLKVPVGTVATDLDTGER 104 Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 + DL + GQR ++A GG GG GNA F SS + P +A G G+ + + L+L+ IAD G+ Sbjct: 105 LADLTEVGQRALVARGGLGGRGNASFASSRRRTPRFAERGTPGETRRLRLELRTIADAGL 164 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGA 224 +G PNAGKS+ LA+++ A+P+IA YPFTTL PNLG+V+ G + F LADIPGII+ A +G Sbjct: 165 VGYPNAGKSSLLAALSNARPQIASYPFTTLSPNLGVVERGLERFTLADIPGIIEGASEGK 224 Query: 225 GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 G+G FL+H RT +L+ ++ E Q + + EL AY+ L ++ L+++D Sbjct: 225 GLGLEFLRHISRTRLLVFVLDVAEAPAQ-TLEALRHELRAYDPSLLTLPALIALNKVDLA 283 Query: 285 DSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 +A EL T G S++ G G LE L +F + Sbjct: 284 APSEVAAAVAEL-TPFGLPVLPVSALEGAG----LEALKGTLFDL 323 >gi|256370736|ref|YP_003108561.1| GTP-binding protein [Candidatus Sulcia muelleri SMDSEM] gi|256009528|gb|ACU52888.1| GTP-binding protein [Candidatus Sulcia muelleri SMDSEM] Length = 326 Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 129/296 (43%), Positives = 196/296 (66%), Gaps = 2/296 (0%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 KFLD K+Y RSG+GG+G I F++ K GGPDGG GG+GG+V I+ + L T+ + Sbjct: 4 KFLDYIKIYCRSGNGGSGMIHFKKNKTFPKGGPDGGDGGKGGNVLIRGNNQLYTISHLKK 63 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 ++H A++G+ G +G+KG++ ++ VP+GT V +E +I ++ + + IL GG Sbjct: 64 KKHNIAENGKNGGVNRITGSKGKNSIIEVPIGTIVKDEKK-QIIFEILHQNEEKILLYGG 122 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN +FK+S ++P+Y+ G LG+E I L+LK++AD+GIIG PN+GKST ++ +T Sbjct: 123 KGGKGNWNFKNSRCKSPFYSEKGKLGKEAIFILELKILADVGIIGFPNSGKSTLISVITS 182 Query: 182 AKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +K KI++YPFTTL PNLG + + + I+ADIPGIIK A+QG G+G +FLKH +R +L Sbjct: 183 SKSKISNYPFTTLIPNLGTLNLKKFNNLIIADIPGIIKGAYQGKGLGFKFLKHIQRNRIL 242 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L ++SA +N Y I++ELS Y+ L KK ++ +S+ D +D K EL Sbjct: 243 LIMISAETKNYIKEYNIIINELSEYDPYLLKKKRLLIISKSDLLDEKLKNEIKKEL 298 >gi|160943937|ref|ZP_02091167.1| hypothetical protein FAEPRAM212_01438 [Faecalibacterium prausnitzii M21/2] gi|158444613|gb|EDP21617.1| hypothetical protein FAEPRAM212_01438 [Faecalibacterium prausnitzii M21/2] gi|295104771|emb|CBL02315.1| Obg family GTPase CgtA [Faecalibacterium prausnitzii SL3/3] Length = 427 Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 129/331 (38%), Positives = 204/331 (61%), Gaps = 6/331 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A +++ +G GG G +SF REKF+ GGPDGG GGRGGD+ A +L+TL+DFRY+ Sbjct: 7 FIDIATIWLHAGKGGDGAVSFHREKFVAAGGPDGGDGGRGGDIIFVADDHLSTLMDFRYK 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A G KG G E++V+ VP+GT + + + +I DL + + +A GG Sbjct: 67 RKYVAPEGGKGGASLCHGKNAENLVIKVPLGTVIKDAESGLVIADL-SDHTPVTIAKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GNAHF + T Q P +A PG+ G++ + L+LKLIAD+G+IG PN GKST +++++ A Sbjct: 126 GGYGNAHFATPTRQIPKFAKPGMPGEDLQVTLELKLIADVGLIGFPNVGKSTLISTISAA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL P LG+V G F+ ADIPG+I+ A +G G+G FL+H ER +LL Sbjct: 186 KPKIANYHFTTLVPTLGVVSVGEGASFVCADIPGLIEGASEGVGLGHDFLRHVERCRLLL 245 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V + ++ I +EL+ ++ L ++ +IV ++ D + + + + Sbjct: 246 HVVDVSGSECRDPIEDFEKINEELAKFSPVLAERPQIVVGNKCDLATEEQIETFRQYVEG 305 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 + G S+ T G+ Q+ +++++ I Sbjct: 306 K-GLTFVPISAATMQGVKQLPGLVYNRLKDI 335 >gi|295100664|emb|CBK98209.1| Obg family GTPase CgtA [Faecalibacterium prausnitzii L2-6] Length = 427 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 122/278 (43%), Positives = 180/278 (64%), Gaps = 5/278 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A +++ +G GG G +SF REKF+ GGPDGG GGRGGD+ +L TL+DFRY+ Sbjct: 7 FIDIATIWLHAGKGGDGAVSFHREKFVAAGGPDGGDGGRGGDIIFVVDDHLTTLMDFRYK 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A G KG G ED+V+ VP+GT + + + +I DL + + +A GG Sbjct: 67 RKYTADEGGKGGASLCHGKNAEDLVIKVPLGTVIKDAESGLVIADL-SDHTPVTIARGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GNAHF + T Q P +A PG+ G++ + L+LKLIAD+G+IG PN GKST +++++ A Sbjct: 126 GGYGNAHFATPTRQIPKFAKPGMPGEDIQVTLELKLIADVGLIGFPNVGKSTLISTISAA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+Y FTTL P LG+V G F+ ADIPG+I+ A +G G+G FL+H ER +LL Sbjct: 186 KPKIANYHFTTLVPTLGVVSVGEGASFVCADIPGLIEGASEGVGLGHDFLRHVERCRLLL 245 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIV 276 H+V + ++ I +EL+ ++ L ++ +IV Sbjct: 246 HVVDVSGSECRDPIEDFEQINEELAKFSPALAERPQIV 283 >gi|314968163|gb|EFT12262.1| Obg family GTPase CgtA [Propionibacterium acnes HL037PA1] Length = 304 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 124/293 (42%), Positives = 181/293 (61%), Gaps = 5/293 (1%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 F+D A + +G GG G S +REKF GGPDGG+GG GG V ++ + TL+D+ + Sbjct: 5 SFVDRATLTAVAGKGGHGCASVKREKFKPLGGPDGGNGGHGGSVILRVDPQVTTLVDYHW 64 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 Q KA +GE G N++GA G D++L VP GT V + D L+ DL G +++A GG Sbjct: 65 QSTRKATNGESGRGDNQAGANGSDMILAVPEGTVVSDADTGELLGDLVGVGAELVVAAGG 124 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA +S +AP +A G G+E+ I L+LK++ADIG++G P+AGKS+ +A+++R Sbjct: 125 RGGLGNAALANSARKAPGFALLGEAGEERKILLELKVVADIGLVGFPSAGKSSLIAAISR 184 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G + +AD+PG+I A G G+G FL+H ER ++ Sbjct: 185 AKPKIADYPFTTLVPNLGVVVAGETTYTVADVPGLIPGASVGKGLGFDFLRHIERCRAIV 244 Query: 242 HIVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLA 290 H++ + + I EL A+ L + +V L+++D D+ LA Sbjct: 245 HVIDCATYEPGRDPVSDLDVIEGELIAHGG-LEDRPRLVVLNKVDVPDAADLA 296 >gi|23336705|ref|ZP_00121904.1| COG0536: Predicted GTPase [Bifidobacterium longum DJO10A] gi|189440480|ref|YP_001955561.1| GTPase ObgE [Bifidobacterium longum DJO10A] gi|261266678|sp|B3DPS4|OBG_BIFLD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|189428915|gb|ACD99063.1| Putative GTPase [Bifidobacterium longum DJO10A] Length = 563 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 132/351 (37%), Positives = 201/351 (57%), Gaps = 21/351 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+++ GDGG G RREK+ GP+GG+GG GG V A N +L+D+R+ Sbjct: 4 FVDRVTVHVKGGDGGNGSAGIRREKYKPLAGPNGGNGGDGGSVVFVADRNATSLLDYRFM 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI--------SLICDLDQEGQR 114 H A G G+ N+ G+KGED++L VP GT VFE G + + DL EG R Sbjct: 64 PHRVAGSGTMGLGDNKDGSKGEDLILPVPCGTVVFEARGEQGKAKHPGAQLADLRHEGDR 123 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 ++A GG GG GN + T +AP +A G LG+E+ + L+LK IAD+ ++G P+AGKS+ Sbjct: 124 CVVAQGGAGGLGNIALANKTRRAPGFALLGELGEERDVILELKSIADVALVGFPSAGKSS 183 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +A+++ KPKIADYPFTTL PNLG+V G + +AD+PG+I A +G G+G FL+H Sbjct: 184 LIAAMSSVKPKIADYPFTTLVPNLGVVIAGDSRYTIADVPGLIPGASEGKGLGLEFLRHI 243 Query: 235 ERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + + + Y + +EL+ Y +L ++ IV L++I Sbjct: 244 ERTEIIAHVIDCATLEPDRDPMSDYHALENELALYADKLELPLGAIPIPERPRIVILNKI 303 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 D ++ LA + G FE S+ + G+ ++ L + +R E Sbjct: 304 DVPEAKELAEFVRPEFEKLGLKVFEISTASHEGLKELNFALSALVHEMREE 354 >gi|46445853|ref|YP_007218.1| GTPase ObgE [Candidatus Protochlamydia amoebophila UWE25] gi|81829061|sp|Q6MEQ6|OBG_PARUW RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|46399494|emb|CAF22943.1| probable to GTP binding protein [Candidatus Protochlamydia amoebophila UWE25] Length = 337 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 128/328 (39%), Positives = 205/328 (62%), Gaps = 4/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D + + +G GG G +++RREK+I GGP GG+GGRGG V ++A + +++L FR++ Sbjct: 2 FVDRVIIELIAGKGGNGVVAWRREKYIPKGGPAGGNGGRGGSVILEADTQISSLDWFRHR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KAQ G G R G G D++L VP GT + + +I D ++ +R +L GG Sbjct: 62 RILKAQSGGDGGGNCRQGKNGTDLILKVPCGTLLKDAKSGKVIHDFVEDKERFVLCKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK+ T+QAP G LG+ I L+LKLIAD+G++G PNAGKST ++S+ Sbjct: 122 GGRGNDSFKTPTHQAPNICTEGTLGEIHHIELELKLIADVGLVGFPNAGKSTLISSLAGL 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 + K+A YPFTTL PNLG ++ + YK +ADIPGII+ A G+G FL+H ERT +L+ Sbjct: 182 RVKVAAYPFTTLQPNLGFIELDNYKRIYIADIPGIIEGASHNRGLGLEFLRHIERTKLLI 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 I+ A + + ++ + +E+ AYN EL ++ +V L++IDT DS + ++ + + Sbjct: 242 FILDASGIDGRTPSHDFRILREEIGAYNPELLERPYLVVLNKIDTEDSPSHIQEFEKNFS 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKI 326 + F+ S++ G G+ +++E + ++ Sbjct: 302 ISSDMLFKISAVYGEGLQELIEKMTQRL 329 >gi|15828824|ref|NP_326184.1| GTPase ObgE [Mycoplasma pulmonis UAB CTIP] gi|81855814|sp|Q98QK8|OBG_MYCPU RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|14089767|emb|CAC13526.1| GTP-BINDING PROTEIN [Mycoplasma pulmonis] Length = 418 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 126/284 (44%), Positives = 180/284 (63%), Gaps = 5/284 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +++G GG G I+FRRE ++ GGP GG GG GG+++ NTL+ Sbjct: 1 MKFIDEITLNVKAGKGGNGMIAFRREAHVDRGGPSGGDGGNGGNIYFVGDLGKNTLLHLY 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ +G G ++N GA GED + VPVGT V+E G +I D+ +E +I A G Sbjct: 61 LQKSIVGNNGVNGGRKNLYGAAGEDKFIKVPVGTVVYE--GQKVIADIVEEKPYLI-AKG 117 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN FK++ N+AP + G+ G+ K + L LK++AD+G +G P+AGKST L+ ++ Sbjct: 118 GRGGRGNTKFKTAKNKAPRISENGLPGESKKLTLVLKVLADVGFVGKPSAGKSTLLSVIS 177 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKP IADY FTTL P LG+VK F++AD+PG+IK AHQG G+G RFLKH ER V+ Sbjct: 178 NAKPTIADYDFTTLVPQLGLVKYFDNSFVVADLPGLIKGAHQGKGLGIRFLKHIERCKVI 237 Query: 241 LHIVSALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQID 282 +++ +EN YQ I +EL YN L +K E++ ++ D Sbjct: 238 ANVIDFGDENKNPLQDYQEIRNELKLYNLNLEEKDEVIVANKKD 281 >gi|211908965|gb|ACJ12777.1| CgtA [Vibrio cholerae] Length = 344 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 108/247 (43%), Positives = 166/247 (67%), Gaps = 4/247 (1%) Query: 45 VWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISL 104 V++ A NLNTLID+R+Q+ ++A+ G+ G N +G G+D L VPVGT+ + + Sbjct: 17 VYMVADENLNTLIDYRFQRFYEAERGKNGGGGNCTGKSGKDKELRVPVGTRAVDIHTNEI 76 Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 I ++ + G+++++A GG G GNA FKSS N++P G G+ + I L+L L+AD+G+ Sbjct: 77 IGEVAEHGKKVMIAKGGWHGLGNARFKSSVNRSPRQKTLGTKGELRDIRLELLLLADVGM 136 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQG 223 +G+PNAGKSTF+ +V+ AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A +G Sbjct: 137 LGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVSVLPEKSFVVADIPGLIEGAAEG 196 Query: 224 AGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQC--ILDELSAYNSELRKKIEIVGLSQ 280 AG+G RFLKH ER VLLH++ + + A+ I+DEL Y+ +L KK + ++ Sbjct: 197 AGLGIRFLKHLERCRVLLHMIDIMPADQSDPAHNALTIIDELEQYSEKLAKKPRWLVFNK 256 Query: 281 IDTVDSD 287 +D + + Sbjct: 257 VDLMSEE 263 >gi|294787323|ref|ZP_06752576.1| GTP-binding protein [Parascardovia denticolens F0305] gi|315227116|ref|ZP_07868903.1| GTP-binding protein [Parascardovia denticolens DSM 10105] gi|294484679|gb|EFG32314.1| GTP-binding protein [Parascardovia denticolens F0305] gi|315119566|gb|EFT82699.1| GTP-binding protein [Parascardovia denticolens DSM 10105] Length = 559 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 130/345 (37%), Positives = 200/345 (57%), Gaps = 18/345 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+ + GDGG G S +REK+ GPDGG GGRGG V + A N +L+ +R+ Sbjct: 4 FVDRVTVHAKGGDGGNGAASIKREKYKPLAGPDGGDGGRGGSVIVMADPNTTSLLHYRFA 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDG---ISLICDLDQEGQRIILAP 119 H A++G G ++ GA G+D++L VPVGT VF+ G ++ DL G ++++A Sbjct: 64 PHRTARNGTMGKGDDKDGAIGQDLILPVPVGTVVFDVTGGKKREVLADLQTPGDQVVVAK 123 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG GN + +AP +A G GQE+ + +LK IAD+ ++G P+AGKS+ +A++ Sbjct: 124 GGLGGQGNRSLANKARRAPGFALLGEPGQERDLVFELKSIADVALVGYPSAGKSSLVAAM 183 Query: 180 TRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 + AKPKIADYPFTTL PNLG+V+ G K F +AD+PG+I A QG G+G FL+H ERT V Sbjct: 184 SAAKPKIADYPFTTLVPNLGVVQAGDKVFTMADVPGLIPGAAQGKGLGLEFLRHIERTEV 243 Query: 240 LLHIVSALE----ENVQAAYQCILDELSAYNSEL---------RKKIEIVGLSQIDTVDS 286 + H++ + + YQ + EL Y +L + + ++ L+++D ++ Sbjct: 244 VAHVIDCATVEAGRDPLSDYQALEKELKQYEDQLDLPLGAIPIKDRPRLIILNKVDVPEA 303 Query: 287 DTLAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 LA K E + V S+ T G+ ++ L D + ++ Sbjct: 304 KELAEFVKPEFEKRGLPVAL-VSTATHEGLRRLTFLLSDMVSKVK 347 >gi|124022104|ref|YP_001016411.1| GTPase ObgE [Prochlorococcus marinus str. MIT 9303] gi|261277675|sp|A2C6N6|OBG_PROM3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|123962390|gb|ABM77146.1| GTP1/OBG family protein [Prochlorococcus marinus str. MIT 9303] Length = 329 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 132/320 (41%), Positives = 203/320 (63%), Gaps = 1/320 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ +R+G GG G ++FRREK++ GGP GG GG GG+V ++A NL TL+DF+ Sbjct: 1 MQFIDQARITVRAGRGGDGIMAFRREKYVPAGGPSGGDGGEGGNVVLEADGNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + F A G +G +GA G+D+++ VP GT+V L+ DL + +++A G Sbjct: 61 YNRLFPAPDGRRGGPNRCTGASGKDLIIKVPCGTEVRHLSTGILLGDLTRSDDLLVVAFG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S+ N+AP G G+E + L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GRGGLGNAHYLSNRNRAPEKFTEGRDGEEWFLQLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ + + ADIPG+I A QGAG+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRRPSGDGTVFADIPGLIAGAAQGAGLGHDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H++ E+ + EL AY +L ++ ++ L++ + +D + + L Sbjct: 241 LIHVLDGGAEDPVEDLLVVEKELVAYGHDLVERPRLLVLNKQELLDEQHQDQLVDALQAA 300 Query: 300 CGQVPFEFSSITGHGIPQIL 319 G+ S+ G G+ +L Sbjct: 301 SGRRLILISAAMGLGLEGLL 320 >gi|302551383|ref|ZP_07303725.1| obg family GTPase CgtA [Streptomyces viridochromogenes DSM 40736] gi|302469001|gb|EFL32094.1| obg family GTPase CgtA [Streptomyces viridochromogenes DSM 40736] Length = 478 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 133/332 (40%), Positives = 195/332 (58%), Gaps = 6/332 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G GG G S REKF GGPDGG+GGRGGDV + ++ TL+D+ + Sbjct: 4 FVDRVELHVAAGSGGHGCASVHREKFKPLGGPDGGNGGRGGDVILTVDQSITTLLDYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG G+D+VL VP GT V ++ G +++ DL G + A GG Sbjct: 64 PHRKATNGKPGEGGNRSGKDGQDLVLPVPDGTVVLDKAG-NVLADLVGHGTSFVAAQGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G + + L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALASARRKAPGFALLGEPGDLRDVVLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G F +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGSTVFTIADVPGLIPGASQGKGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + LE + I +EL Y L + IV +++ID D LA Sbjct: 243 VLDTATLESDRDPVSDLDIIEEELRQYGG-LDNRPRIVVMNKIDVPDGKDLAEMVRPDLE 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G FE S++ G+ ++ L + + R Sbjct: 302 ARGYRVFEVSAVAHMGLKELSYALGELVAKAR 333 >gi|239979422|ref|ZP_04701946.1| GTPase ObgE [Streptomyces albus J1074] gi|291451296|ref|ZP_06590686.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291354245|gb|EFE81147.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 481 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 132/332 (39%), Positives = 197/332 (59%), Gaps = 6/332 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G+GG G S REKF GGPDGG+GGRGGDV + ++ TL+++ Y Sbjct: 4 FVDRVELHVAAGNGGHGCASVHREKFKPLGGPDGGNGGRGGDVVLVVDQSVTTLLEYHYS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG G+D+VL VP GT V + +G ++ DL EG + A GG Sbjct: 64 PHRKATNGKPGEGGNRSGKDGQDLVLPVPDGTVVLDRNG-EVLADLIGEGTTYVAASGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G + L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALASARRKAPGFALLGEPGDAGDVVLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 RPKIADYPFTTLVPNLGVVTAGSTVYTVADVPGLIPGASQGKGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + LE + + I +EL +Y L + +V L++ID D LA Sbjct: 243 VLDTATLESDRDPVSDLDVIEEELRSYGG-LDGRPRVVVLNKIDVTDGQDLAEMVRPDLE 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G FE S++ G+ ++ L + + R Sbjct: 302 ARGYRVFEVSAVAHKGLKELSFALAELVGEAR 333 >gi|163791323|ref|ZP_02185736.1| GTP-binding protein [Carnobacterium sp. AT7] gi|159873402|gb|EDP67493.1| GTP-binding protein [Carnobacterium sp. AT7] Length = 437 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 136/335 (40%), Positives = 201/335 (60%), Gaps = 15/335 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++GDGG G ++FRREKF+ GGP GG GG+GGDV L TL+DFR+ Sbjct: 4 FLDQVTINVKAGDGGNGMVAFRREKFVPDGGPAGGDGGKGGDVVFIVDEGLRTLMDFRFN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+HGE GM +N G D V+ VP GT + E + L+ DL G +++A GG Sbjct: 64 RHFKAEHGENGMSKNMHGRGAGDNVIKVPPGTTIKEAETGKLLGDLVHHGHSLVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP A G G+E I ++LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNSRFATPRNPAPEIAENGEPGEEYKIDMELKVLADVGLVGFPSVGKSTILSVVSAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V+ + F++AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 RPKIGAYHFTTLVPNLGMVQTPDGRSFVMADLPGLIEGASQGIGLGTQFLRHIERTRVIL 243 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT---------L 289 H++ + Y I EL +N L ++ +I+ +++D +++ Sbjct: 244 HVIDMSGSEGRDPFDDYVAINKELETHNLRLMERPQIIVANKMDMPEAEENLISFKEKLQ 303 Query: 290 ARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 A KK+E Q+ F S+IT G +L D Sbjct: 304 ALKKDEYEEDL-QI-FAISAITHQGTQNLLNATAD 336 >gi|311113737|ref|YP_003984959.1| GTP-binding protein [Rothia dentocariosa ATCC 17931] gi|310945231|gb|ADP41525.1| GTP-binding protein [Rothia dentocariosa ATCC 17931] Length = 532 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 131/330 (39%), Positives = 199/330 (60%), Gaps = 13/330 (3%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++I G GG G +S RREKF GGP+GG+GG GGDV ++ + TL+++ + Sbjct: 3 EFVDRVVLHISGGHGGNGCVSVRREKFKPLGGPNGGNGGNGGDVILRVDNQTTTLLEYHH 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H A +G+ G G GED+VLTVP GT V + DG +++ DL G + A GG Sbjct: 63 SPHQHAPNGDIGRGDMHHGYNGEDLVLTVPQGTVVKDRDG-NVLADLLHVGDKYTAARGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S+ +AP +A GI G+E I L+LK IADI ++G P+AGKS+ +A+++ Sbjct: 122 QGGLGNAALASTKRKAPGFALLGIPGEETDIVLELKSIADIALVGYPSAGKSSLIAAISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A+PKIADYPFTTL PNLG+V+ G + +AD+PG+I+ A +G G+G RFL+H ER+ L+ Sbjct: 182 ARPKIADYPFTTLIPNLGVVQAGDVRYTVADVPGLIEGASEGKGLGHRFLRHVERSSALV 241 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNSE--------LRKKIEIVGLSQIDTVDSDTL 289 H++ + LE + + ++ I EL Y + L + +I+ L++ID ++ L Sbjct: 242 HVIDCATLEPGRDPISDFEVIRGELENYAVDPTAGVTVPLNDRPQIIVLNKIDVPEAREL 301 Query: 290 ARKKNELATQCGQVPFEFSSITGHGIPQIL 319 A G FE S+ + G+ ++ Sbjct: 302 ADFVRPEFENMGYKVFEISTASHEGLKPLI 331 >gi|300214766|gb|ADJ79182.1| GTPase obg (GTP-binding protein obg) [Lactobacillus salivarius CECT 5713] Length = 414 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 131/317 (41%), Positives = 198/317 (62%), Gaps = 9/317 (2%) Query: 21 ISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSG 80 ++FRREK++ GGP GG GG+GG + ++ L TL+DFRY + FKA+ G+ GM + G Sbjct: 2 VAFRREKYVPNGGPAGGDGGKGGSIILKVDQGLRTLMDFRYHRIFKAKPGQNGMIKGMYG 61 Query: 81 AKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYY 140 +D ++VP GT V + + L+ DL + +++A GG GG GN F S N AP Sbjct: 62 RGADDTYISVPQGTTVTDAETGELLGDLVEADDELVVAKGGRGGRGNIKFASPKNPAPEI 121 Query: 141 ANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI 200 A G G+E+ + L+LK++AD+G++G P+ GKST L+ VT AKPKIA+Y FTTL PNLG+ Sbjct: 122 AENGEPGEERKLKLELKVLADVGLVGFPSVGKSTLLSVVTSAKPKIAEYHFTTLVPNLGM 181 Query: 201 VK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SALE-ENVQAAYQ 256 V+ + +++++AD+PG+I+ A QG G+G +FL+H ERT V+LH++ S +E + + Sbjct: 182 VRLDDGRDYVMADLPGLIEGASQGVGLGIQFLRHVERTRVILHLIDMSGVEGRDPYDDFV 241 Query: 257 CILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELATQ--CGQVP--FEFSSIT 311 I +EL Y+ L + +IV S++D DS LA K +LA QVP E SS+T Sbjct: 242 KINEELKVYDPTLLDRPQIVVASKMDMPDSAKNLAEFKVKLAKDKTLKQVPEVMEISSLT 301 Query: 312 GHGIPQILECLHDKIFS 328 G+ ++ D + S Sbjct: 302 HQGLKELTHRTADVLES 318 >gi|283853092|ref|ZP_06370347.1| GTP-binding protein Obg/CgtA [Desulfovibrio sp. FW1012B] gi|283571490|gb|EFC19495.1| GTP-binding protein Obg/CgtA [Desulfovibrio sp. FW1012B] Length = 420 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 110/234 (47%), Positives = 154/234 (65%), Gaps = 5/234 (2%) Query: 93 GTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKII 152 G V E L+ DL + GQ + GG GG GN HF SST + P +A PG G+E+ I Sbjct: 170 GEAVEEAGDPELLVDLTEPGQTYVACKGGRGGKGNLHFASSTMRTPRFAQPGESGEERRI 229 Query: 153 WLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILA 211 L LK++AD+GIIGLPNAGKSTF+A+V+RA+PKIA YPFTTL PNLG++++ Y +LA Sbjct: 230 RLVLKVLADVGIIGLPNAGKSTFIAAVSRARPKIAAYPFTTLTPNLGVIEDDYGTRLVLA 289 Query: 212 DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE---ENVQAAYQCILDELSAYNSE 268 DIPG+I+ AH G G+G RFL+H ERT VLLH+VSA + E V A+ + +EL ++ Sbjct: 290 DIPGLIEGAHLGHGLGHRFLRHVERTRVLLHVVSAEDASPEGVFEAFGVVDEELRRFDPA 349 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 L ++ +I +++ID + + LA ++ +A GQ S+ TG G+ +LE L Sbjct: 350 LAERPQIRVVNKIDLLTPEDLAERQAAVAA-TGQTVLFMSAKTGQGVDAVLEAL 402 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/98 (51%), Positives = 71/98 (72%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA + +RSG GG G +SFRREKFI GGPDGG GG+GGDV +A +L TL D R Sbjct: 1 MRFVDEAWIVVRSGKGGRGAVSFRREKFIPRGGPDGGDGGKGGDVVFRADPDLLTLYDLR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 ++ ++A+ G+ G R + G ED+++ VPVGT+++E Sbjct: 61 LRRIYEAKGGDGGKGRQKHGKAAEDLIIDVPVGTELYE 98 >gi|211908961|gb|ACJ12775.1| CgtA [Vibrio vulnificus] Length = 343 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 118/287 (41%), Positives = 179/287 (62%), Gaps = 8/287 (2%) Query: 45 VWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISL 104 V+IQA NLNTLID+R+Q+ ++A+ G+ G N +G +G+D+ L VPVGT+ + Sbjct: 17 VYIQADENLNTLIDYRFQRFYEAERGQNGSGGNCTGKRGKDITLRVPVGTRAVDIHTNET 76 Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 + ++ + G+++++A GG G GN FKSS N+AP G G+ + + L+L L+AD+G+ Sbjct: 77 VAEVAEHGKKVMVAKGGWHGLGNTRFKSSVNRAPRQKTMGTKGEIRELRLELLLLADVGM 136 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQG 223 +GLPNAGKSTF+ +V+ AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A G Sbjct: 137 LGLPNAGKSTFIRAVSAAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADG 196 Query: 224 AGIGDRFLKHTERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 AG+G RFLKH ER VLLH++ + VQ A I+DEL Y+ +L K + + Sbjct: 197 AGLGIRFLKHLERCRVLLHMIDIFPIDQSDPVQNAL-TIIDELEQYSEKLANKPRWLVFN 255 Query: 280 QIDTVDSDTLARKKNELATQCG--QVPFEFSSITGHGIPQILECLHD 324 ++D V + E+ G + F+ S++ G ++ L D Sbjct: 256 KVDLVSEEQADEIIQEVIDALGWEEQYFKISAVNRQGTKELCYKLAD 302 >gi|50842319|ref|YP_055546.1| GTPase ObgE [Propionibacterium acnes KPA171202] gi|81611946|sp|Q6A9H8|OBG_PROAC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|50839921|gb|AAT82588.1| GTP1/OBG family [Propionibacterium acnes KPA171202] gi|315107026|gb|EFT79002.1| Obg family GTPase CgtA [Propionibacterium acnes HL030PA1] Length = 505 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 128/317 (40%), Positives = 190/317 (59%), Gaps = 5/317 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A + +G GG G S +REKF GGPDGG+GG GG V ++ + TL+D+ +Q Sbjct: 6 FVDRATLTAVAGKGGHGCASVKREKFKPLGGPDGGNGGHGGSVILRVDPQVTTLVDYHWQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 KA +GE G N++GA G D++L VP GT V + D L+ DL G +++A GG Sbjct: 66 STRKATNGESGRGDNQAGANGSDMILAVPEGTVVSDADTGELLGDLVGVGAELVVAAGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA +S +AP +A G G+E+ I L+LK++ADIG++G P+AGKS+ +A+++RA Sbjct: 126 GGLGNAALANSARKAPGFALLGEAGEERKILLELKVVADIGLVGFPSAGKSSLIAAISRA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A G G+G FL+H ER ++H Sbjct: 186 KPKIADYPFTTLVPNLGVVVAGETTYTVADVPGLIPGASVGKGLGFDFLRHIERCRAIVH 245 Query: 243 IVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + + I EL A+ L + +V L+++D D+ LA + Sbjct: 246 VIDCATYEPGRDPVSDLDVIEGELIAHGG-LEDRPRLVVLNKVDVPDAADLADIIFDDVA 304 Query: 299 QCGQVPFEFSSITGHGI 315 + G S+ +G G+ Sbjct: 305 ERGWPVSRVSTKSGEGL 321 >gi|33863811|ref|NP_895371.1| GTPase ObgE [Prochlorococcus marinus str. MIT 9313] gi|81834834|sp|Q7TUR3|OBG_PROMM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|33635394|emb|CAE21719.1| GTP1/OBG family:Hemolysin-type calcium-binding region [Prochlorococcus marinus str. MIT 9313] Length = 329 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 132/320 (41%), Positives = 204/320 (63%), Gaps = 1/320 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D+A++ +R+G GG G ++FRREK++ GGP GG GG GG+V ++A NL TL+DF+ Sbjct: 1 MQFIDQARITVRAGRGGDGIMAFRREKYVPAGGPSGGDGGNGGNVVLEADGNLQTLLDFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F A G +G +GA G+D+++ VP GT+V L+ DL + +++A G Sbjct: 61 YKRLFPAPDGRRGGPNRCTGASGKDLIIKVPCGTEVRHLYTGILLGDLTRSEDLLVVAFG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNAH+ S+ N+AP G G+E + L+LKL+A++GIIGLPNAGKST ++ ++ Sbjct: 121 GRGGLGNAHYLSNRNRAPEKFTEGRDGEEWFLQLELKLLAEVGIIGLPNAGKSTLISVLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+PKIADYPFTTL PNLG+V+ + + ADIPG+I A QGAG+G FL+H ERT + Sbjct: 181 AARPKIADYPFTTLVPNLGVVRRPSGDGTVFADIPGLIAGAAQGAGLGHDFLRHIERTRL 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L+H++ E+ + EL AY +L ++ ++ L++ + +D + + L Sbjct: 241 LIHVLDGGAEDPVEDLLVVEKELVAYGHDLVERPRLLVLNKQELLDEQHQDQLVDALQAA 300 Query: 300 CGQVPFEFSSITGHGIPQIL 319 G+ S+ G G+ +L Sbjct: 301 SGRSLILISAAMGLGLEGLL 320 >gi|329934594|ref|ZP_08284635.1| GTP-binding protein ObgE [Streptomyces griseoaurantiacus M045] gi|329305416|gb|EGG49272.1| GTP-binding protein ObgE [Streptomyces griseoaurantiacus M045] Length = 481 Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 132/335 (39%), Positives = 197/335 (58%), Gaps = 10/335 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G+GG G S REKF GGPDGG+GGRGGDV + ++ TL+D+ + Sbjct: 4 FVDRVELHVAAGNGGHGCASVHREKFKPLGGPDGGNGGRGGDVILTVDQSVTTLLDYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG G+D+VL VP GT V + G +++ DL G + A GG Sbjct: 64 PHRKATNGKPGEGGNRSGKDGQDLVLPVPDGTVVLDRAG-NVLADLVGHGTSYVAAQGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G+ G + I L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALASARRKAPGFALLGVPGDLQDIVLELKTVADVALVGYPSAGKSSLISVMSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGSTVYTVADVPGLIPGASQGKGLGLEFLRHVERCSVLVH 242 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRK------KIEIVGLSQIDTVDSDTLARKKNEL 296 + L+ + + + +L +ELR+ + IV L++ID D LA Sbjct: 243 V---LDTATLESERDPISDLDIIEAELREYGGLDDRPRIVVLNKIDVPDGKDLAEMVRPD 299 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 G FE S++ G+ ++ L + + R Sbjct: 300 LEARGYRVFEVSAVAHIGLRELSFALAELVAQARA 334 >gi|156399375|ref|XP_001638477.1| predicted protein [Nematostella vectensis] gi|156225598|gb|EDO46414.1| predicted protein [Nematostella vectensis] Length = 360 Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 126/323 (39%), Positives = 196/323 (60%), Gaps = 9/323 (2%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 KF+D KV +++GDGG G F+R +F GGPDGG GGRGG V + A S+L L + Sbjct: 36 KFIDWKKVIVKAGDGGNGLTHFKRLRFQPKGGPDGGDGGRGGSVILSADSSLQELAHVK- 94 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 +H KA++G G NR G D+++ VP+GT + I D+ +EG+ ++A GG Sbjct: 95 -KHLKAENGGSGGIDNRHGKNASDLIVKVPLGTIATHNKEV--IADISEEGESCVIAQGG 151 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA FK++T+QAP ++ G GQE++I L+LK IAD+G++G PNAGKST L +++R Sbjct: 152 EGGLGNATFKTATDQAPEKSSQGTPGQERVIELELKTIADVGLVGFPNAGKSTLLRAISR 211 Query: 182 AKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A P +A YPFTTL P++G+V+ + + + +ADIPG+I +AH G+G FL+H ER L Sbjct: 212 ATPTVAAYPFTTLNPSVGMVEYDDFSQIAVADIPGLIPDAHLNKGLGHTFLRHIERCCSL 271 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L+++ +++ + + + EL Y L + + ++ID DS ++ + E Sbjct: 272 LYVLDISQKDFHSQFISLQRELELYKKGLSSRPAAIVANKIDLADSIDVSCLEREFDLPV 331 Query: 301 GQVPFEFSSITGHGIPQILECLH 323 V ++ G+GIP + +H Sbjct: 332 MAVSGKY----GNGIPALKRAIH 350 >gi|300741643|ref|ZP_07071664.1| GTP-binding protein [Rothia dentocariosa M567] gi|300380828|gb|EFJ77390.1| GTP-binding protein [Rothia dentocariosa M567] Length = 532 Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 131/330 (39%), Positives = 198/330 (60%), Gaps = 13/330 (3%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++I G GG G +S RREKF GGP+GG+GG GGDV ++ + TL+++ + Sbjct: 3 EFVDRVVLHISGGHGGNGCVSVRREKFKPLGGPNGGNGGNGGDVILRVDNQTTTLLEYHH 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H A +G+ G G GED+VLTVP GT V + DG +++ DL G A GG Sbjct: 63 SPHQHAPNGDIGRGDMHHGYNGEDLVLTVPQGTVVKDRDG-NVLADLLHVGDEYTAARGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S+ +AP +A GI G+E I L+LK IADI ++G P+AGKS+ +A+++ Sbjct: 122 QGGLGNAALASTKRKAPGFALLGIPGEETDIVLELKSIADIALVGYPSAGKSSLIAAISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A+PKIADYPFTTL PNLG+V+ G + +AD+PG+I+ A +G G+G RFL+H ER+ L+ Sbjct: 182 ARPKIADYPFTTLIPNLGVVQAGDVRYTVADVPGLIEGASEGKGLGHRFLRHVERSSALV 241 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNSE--------LRKKIEIVGLSQIDTVDSDTL 289 H++ + LE + + ++ I EL Y + L + +I+ L++ID ++ L Sbjct: 242 HVIDCATLEPGRDPISDFEVIRGELENYAVDPTAGVTVPLNDRPQIIVLNKIDVPEAREL 301 Query: 290 ARKKNELATQCGQVPFEFSSITGHGIPQIL 319 A G FE S+ + G+ ++ Sbjct: 302 ADFVRPEFENMGYKVFEISTASHEGLKPLI 331 >gi|184200778|ref|YP_001854985.1| GTPase ObgE [Kocuria rhizophila DC2201] gi|261266840|sp|B2GGD9|OBG_KOCRD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|183581008|dbj|BAG29479.1| GTP-binding protein Obg [Kocuria rhizophila DC2201] Length = 531 Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 134/331 (40%), Positives = 195/331 (58%), Gaps = 17/331 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+ G+GG G +S +REKF GGPDGG+GG GG V ++ TL+ F + Sbjct: 4 FVDRVIVHATGGNGGHGCVSVKREKFKPLGGPDGGNGGDGGSVILRVDGQSTTLLGFHHA 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +GE G R G KG+D+VL+VP GT V + +G +++ DL EG +LA GG Sbjct: 64 PHQKAPNGEPGKGDMRHGFKGQDLVLSVPDGTVVKDREG-NVLADLLGEGSEYVLAAGGQ 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S +AP +A G G+E+ + L+LK IADI ++G P+AGKS+ +A+++ A Sbjct: 123 GGRGNAALASPKRKAPGFALLGTPGEEQEVELELKSIADIALVGFPSAGKSSLIAAMSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G F +AD+PG+I A +G G+G FL+H ER L+H Sbjct: 183 RPKIADYPFTTLVPNLGVVQAGDTRFTVADVPGLIPGASEGKGLGLEFLRHVERCAALVH 242 Query: 243 IV---------------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 ++ ALEE + Q I DE + L ++ +V L+++D ++ Sbjct: 243 VIDCATLEPGRDPLTDLDALEEELAHYAQDIADE-DPSSIPLTQRPRLVVLNKVDVPEAR 301 Query: 288 TLARKKNELATQCGQVPFEFSSITGHGIPQI 318 LA Q G FE S+ + G+ ++ Sbjct: 302 ELADFVRVELEQRGYPVFEISTASHEGLREL 332 >gi|71891883|ref|YP_277613.1| GTPase ObgE [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|123641159|sp|Q493U5|OBG_BLOPB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|71795989|gb|AAZ40740.1| putative GTP-binding protein [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 340 Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 125/307 (40%), Positives = 184/307 (59%), Gaps = 10/307 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISF----RREKFIEFGGPDGGSGGRGGDVWIQATSNLNTL 56 MKF+D + + +G+GG G +SF RR F++ P+G +GG GGDVW+ A N+NTL Sbjct: 1 MKFVDMTNITVIAGNGGNGCVSFQKSGRRASFLK--KPNGSNGGNGGDVWLLADPNINTL 58 Query: 57 IDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRII 116 F F+A HG+ G R +G +G+DV++ VP GT+V + L+ D+ +R++ Sbjct: 59 NYFHSNCVFRAGHGQSGRSRGCTGKRGKDVIVKVPWGTRVSYKKTNKLLGDMGIHHKRLM 118 Query: 117 LAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFL 176 +A GG G GN HFKSS + G G+ + + L+L LIA++GI GLPN+GKS+F+ Sbjct: 119 VAKGGRHGLGNGHFKSSLHYCKVLNTNGSTGEFQHLLLELLLIANVGIFGLPNSGKSSFI 178 Query: 177 ASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTE 235 ++ AKPK+ADYPFTTL P LG+V+ Y FI+ADIPGIIK A G G+G RFLKH E Sbjct: 179 RIISSAKPKVADYPFTTLVPYLGVVQINNYDRFIIADIPGIIKGASHGLGLGMRFLKHLE 238 Query: 236 RTHVLLHIVSALEENVQAAYQCIL---DELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 +LLH + + + I+ ELS YN L +K + ++ID ++ ++ Sbjct: 239 HCQILLHFIDIAPVDNSDPLENIITIQHELSNYNENLVRKPCWLIFNKIDLLEQQVAEKR 298 Query: 293 KNELATQ 299 N + + Sbjct: 299 INHVISS 305 >gi|284047611|ref|YP_003397950.1| GTP-binding protein Obg/CgtA [Acidaminococcus fermentans DSM 20731] gi|283951832|gb|ADB46635.1| GTP-binding protein Obg/CgtA [Acidaminococcus fermentans DSM 20731] Length = 425 Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 135/339 (39%), Positives = 210/339 (61%), Gaps = 4/339 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F D+A++Y+ +G GG G SFRREK++ GGPDGG+GGRGG V + A +LNTL+DFR Sbjct: 1 MLFTDKARIYVEAGSGGDGASSFRREKYVACGGPDGGNGGRGGSVVLVADKDLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F AQ G G +N +GAK +V + VP+GT V+++ + DL G + + A G Sbjct: 61 YKRKFVAQRGGNGAAKNCTGAKAPNVEVKVPLGTVVYDDATGVALADLAHPGDQFVAARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA + +ST Q +A G G + + L+LK++AD+G++G P+ GKS+ +A V+ Sbjct: 121 GRGGKGNACYVTSTKQGVTFAEKGEPGTKGWLRLELKMLADVGMVGYPSVGKSSIVARVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P++A Y FTTL P LG+V+ + F+LAD+PG+I+ A QG G+G FL+H ERT V Sbjct: 181 AARPEVAAYHFTTLTPVLGVVRLDAETSFVLADLPGLIEGASQGVGLGHDFLRHIERTRV 240 Query: 240 LLHI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 +LH+ VS E + ++ I +EL Y+ +L K+ +V +++D D++ +K Sbjct: 241 ILHVVDVSGCEGRDPVEDFKKINEELVLYSEKLAKRPMLVVANKMDLPDAEENYKKLEAY 300 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 T G + S+ T G+ +I+ ++ + E E Sbjct: 301 VTAQGYPIMKASAATSQGLREIMWKAYEMLQKAPAEEEI 339 >gi|21221053|ref|NP_626832.1| GTPase ObgE [Streptomyces coelicolor A3(2)] gi|256787783|ref|ZP_05526214.1| GTPase ObgE [Streptomyces lividans TK24] gi|289771666|ref|ZP_06531044.1| obg [Streptomyces lividans TK24] gi|81818264|sp|P95722|OBG_STRCO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|1783290|dbj|BAA13498.1| Obg [Streptomyces coelicolor A3(2)] gi|6983737|emb|CAB75376.1| GTP-binding protein [Streptomyces coelicolor A3(2)] gi|289701865|gb|EFD69294.1| obg [Streptomyces lividans TK24] Length = 478 Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 133/334 (39%), Positives = 197/334 (58%), Gaps = 10/334 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G+GG G S REKF GGPDGG+GGRGGDV + ++ TL+D+ + Sbjct: 4 FVDRVELHVAAGNGGHGCASVHREKFKPLGGPDGGNGGRGGDVILTVDQSVTTLLDYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG G+D+VL VP GT V + G +++ DL G + A GG Sbjct: 64 PHRKATNGKPGEGGNRSGKDGQDLVLPVPDGTVVLDGAG-NVLADLVGHGTSYVAAQGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G + I L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALASARRKAPGFALLGEPGDLQDIHLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGETVYTVADVPGLIPGASQGKGLGLEFLRHVERCSVLVH 242 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRK------KIEIVGLSQIDTVDSDTLARKKNEL 296 + L+ + + L +L +ELR+ + IV L++ID D LA Sbjct: 243 V---LDTATLESERDPLSDLDVIETELREYGGLDNRPRIVVLNKIDVPDGKDLAEMVRPD 299 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G FE S++ G+ ++ L + + + R Sbjct: 300 LEARGYRVFEVSAVAHMGLRELSFALAELVATAR 333 >gi|261277911|sp|Q7UVH6|OBG_RHOBA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|327543174|gb|EGF29609.1| GTPase ObgE [Rhodopirellula baltica WH47] Length = 407 Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 124/296 (41%), Positives = 186/296 (62%), Gaps = 7/296 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D ++ ++G GG G +SFR+EK++ GGPDGG GGRG + ++A +N+L F + Sbjct: 2 FFDRVEIEFQAGKGGDGCMSFRKEKYVPKGGPDGGDGGRGASIVLEARLGVNSLAQFATR 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F+A+ G GM R G KG ++ L VP GT + + +I DL Q G+ ++ GG Sbjct: 62 KFFRAEKGGFGMGALRHGRKGREMRLFVPCGTSIIDAKDGFVIKDLTQVGEEFVICRGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA FK+ NQAP G G+ + + ++LK IAD+G+IG PNAGKST L+ ++ A Sbjct: 122 GGHGNARFKTPQNQAPRERELGQPGETRHVIMELKSIADVGLIGKPNAGKSTLLSRISSA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IADYPFTT YPNLGIV + + FILADIPG+I+ A +G G+G FL+H ER +L+ Sbjct: 182 RPEIADYPFTTKYPNLGIVDVDIERSFILADIPGLIEGASEGIGLGHEFLRHVERAGLLV 241 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 H++ + +Q Y I +EL Y+ L + E+V +++ + +D D R++ Sbjct: 242 HLIEPTPVDGSDPIQ-NYVAIREELQHYDESLADRDELVVMTKCE-LDPDGEVREQ 295 >gi|32472070|ref|NP_865064.1| GTPase ObgE [Rhodopirellula baltica SH 1] gi|32397442|emb|CAD72748.1| GTP-binding protein OBG [Rhodopirellula baltica SH 1] Length = 415 Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 124/296 (41%), Positives = 186/296 (62%), Gaps = 7/296 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D ++ ++G GG G +SFR+EK++ GGPDGG GGRG + ++A +N+L F + Sbjct: 10 FFDRVEIEFQAGKGGDGCMSFRKEKYVPKGGPDGGDGGRGASIVLEARLGVNSLAQFATR 69 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F+A+ G GM R G KG ++ L VP GT + + +I DL Q G+ ++ GG Sbjct: 70 KFFRAEKGGFGMGALRHGRKGREMRLFVPCGTSIIDAKDGFVIKDLTQVGEEFVICRGGK 129 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA FK+ NQAP G G+ + + ++LK IAD+G+IG PNAGKST L+ ++ A Sbjct: 130 GGHGNARFKTPQNQAPRERELGQPGETRHVIMELKSIADVGLIGKPNAGKSTLLSRISSA 189 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IADYPFTT YPNLGIV + + FILADIPG+I+ A +G G+G FL+H ER +L+ Sbjct: 190 RPEIADYPFTTKYPNLGIVDVDIERSFILADIPGLIEGASEGIGLGHEFLRHVERAGLLV 249 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 H++ + +Q Y I +EL Y+ L + E+V +++ + +D D R++ Sbjct: 250 HLIEPTPVDGSDPIQ-NYVAIREELQHYDESLADRDELVVMTKCE-LDPDGEVREQ 303 >gi|170782188|ref|YP_001710521.1| GTPase ObgE [Clavibacter michiganensis subsp. sepedonicus] gi|261266732|sp|B0RDG3|OBG_CLAMS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|169156757|emb|CAQ01919.1| GTP-binding protein [Clavibacter michiganensis subsp. sepedonicus] Length = 517 Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 128/338 (37%), Positives = 201/338 (59%), Gaps = 12/338 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++R+G+GG G +S RREKF G DGG+GG GGD+ + A + TL+ + Sbjct: 4 FVDTVTLHLRAGNGGNGCVSVRREKFKPLAGTDGGNGGNGGDIVLVADPQVTTLLAYHRG 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H +++G GM +R G GE + L VPVGT V + DG L D+ G R I A G Sbjct: 64 PHRSSRNGGPGMGDHRHGTLGETLELPVPVGTVVKDADGNEL-ADMATPGMRFIAAEAGQ 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA ++ +AP +A G G E + L+LK++AD+ ++G P+AGKS+ +A+++ A Sbjct: 123 GGLGNASLATTKRKAPGFALLGTQGYEGDVVLELKVVADVALVGYPSAGKSSLVAAISAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL+PNLG+V+ + +AD+PG+I+ A +G G+G FL+H ER LLH Sbjct: 183 KPKIADYPFTTLHPNLGVVEVADSRYTVADVPGLIEGASEGKGLGLEFLRHVERCSALLH 242 Query: 243 IVSALE----ENVQAAYQCILDELSAY-----NSELRKKIEIVGLSQIDTVDSDTLAR-K 292 ++ + + IL EL+AY L ++ +++ L++ID ++ LA Sbjct: 243 VLDCATLDPGRDPVSDLDIILTELAAYPVPDGQVPLLERPQLIALNKIDVPEARELAELV 302 Query: 293 KNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 + EL + +V F+ S+++ G+ Q+ L + + R Sbjct: 303 RPELEARGYRV-FDISTVSHDGLRQLSFALAELVKDAR 339 >gi|315185754|gb|EFU19520.1| GTP-binding protein Obg/CgtA [Spirochaeta thermophila DSM 6578] Length = 343 Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 130/283 (45%), Positives = 182/283 (64%), Gaps = 2/283 (0%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+DE ++ + SG GG G +SFRREK++ GGPDGG GG+GGDV NL TL+ R Sbjct: 10 RFVDEVEIEVSSGKGGDGCVSFRREKYVPRGGPDGGDGGKGGDVVFVIRPNLKTLVHLRR 69 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQ--EGQRIILAP 119 + ++A +GE G + + G GE++V+ VP GT V + ++ DL ++ + Sbjct: 70 RSVYRAGNGEPGRGKQQHGKNGEELVIEVPPGTVVRDAATGEVLKDLSSLSSEEKWVFLR 129 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG GN HFKS TNQAP +A PG G+ + I L+L+LIADIG++G PNAGKST L+ V Sbjct: 130 GGRGGRGNVHFKSPTNQAPRHAEPGRPGETRRIILELRLIADIGLVGFPNAGKSTLLSVV 189 Query: 180 TRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 T A P+IA YPFTT P+LG++ E ILADIPGII+ A +GAG+G RFLKH RT Sbjct: 190 TNAHPRIASYPFTTRIPHLGVMYIHETELILADIPGIIEGASRGAGLGLRFLKHIARTAG 249 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 L ++ +E + A+ +++EL Y L +K I+ ++ID Sbjct: 250 LAFLIDLADEMWEGAFDILMNELRTYGQGLAEKPSIIVGTKID 292 >gi|292670996|ref|ZP_06604422.1| Spo0B-associated GTP-binding protein [Selenomonas noxia ATCC 43541] gi|292647617|gb|EFF65589.1| Spo0B-associated GTP-binding protein [Selenomonas noxia ATCC 43541] Length = 441 Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 133/324 (41%), Positives = 210/324 (64%), Gaps = 4/324 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D A++ +++GDGG G +FR EKF+ GGP GG GGRGGDV +A NLNTL+ FR Sbjct: 15 MQFIDRAQITVKAGDGGHGKSAFRHEKFMPKGGPSGGDGGRGGDVIFRADRNLNTLLSFR 74 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A++GE G +N+ G + + + VP GT V ++ ++ DL + G ++A G Sbjct: 75 FHRKFTAKNGENGEHKNQYGKNAQPLYVDVPPGTIVADDATGEVLADLTEVGAEAVIARG 134 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F ++ N+AP +A G G+ + + L+LKL+AD+G++G P+ GKS+ +AS + Sbjct: 135 GRGGRGNAKFANAANRAPSFAEFGEPGESRKLRLELKLLADVGLVGYPSVGKSSLVASCS 194 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P+IADY FTTL P LG+V+ Y K F++ADIPG+I+ A G G+G FL+H ERT + Sbjct: 195 AARPEIADYHFTTLTPVLGVVQTDYEKSFVMADIPGLIEGAADGVGLGHDFLRHVERTRL 254 Query: 240 LLHIVSA--LE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 +LHIV A +E + Y I EL+ Y+ ++ ++ +I+ ++ID ++ + EL Sbjct: 255 ILHIVDASGIEGRDPVEDYYTINRELARYSEKIARRTQILVANKIDLPSAEEHLPRLKEL 314 Query: 297 ATQCGQVPFEFSSITGHGIPQILE 320 A + G F S+ T G+ ++++ Sbjct: 315 AQKEGMEFFAISAATRAGVQELID 338 >gi|307718716|ref|YP_003874248.1| GTP-binding protein, GTP1/Obg family [Spirochaeta thermophila DSM 6192] gi|306532441|gb|ADN01975.1| GTP-binding protein, GTP1/Obg family [Spirochaeta thermophila DSM 6192] Length = 343 Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 130/283 (45%), Positives = 182/283 (64%), Gaps = 2/283 (0%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+DE ++ + SG GG G +SFRREK++ GGPDGG GG+GGDV NL TL+ R Sbjct: 10 RFVDEVEIEVSSGKGGDGCVSFRREKYVPRGGPDGGDGGKGGDVVFVIRPNLKTLVHLRR 69 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQ--EGQRIILAP 119 + ++A +GE G + + G GE++V+ VP GT V + ++ DL ++ + Sbjct: 70 RSVYRAGNGEPGRGKQQHGKNGEELVIEVPPGTVVRDAATGEVLKDLSSLSPEEKWVFLR 129 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG GN HFKS TNQAP +A PG G+ + I L+L+LIADIG++G PNAGKST L+ V Sbjct: 130 GGRGGRGNVHFKSPTNQAPRHAEPGRPGETRRIILELRLIADIGLVGFPNAGKSTLLSVV 189 Query: 180 TRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 T A P+IA YPFTT P+LG++ E ILADIPGII+ A +GAG+G RFLKH RT Sbjct: 190 TNAHPRIASYPFTTRIPHLGVMYIHETELILADIPGIIEGASRGAGLGLRFLKHIARTAG 249 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 L ++ +E + A+ +++EL Y L +K I+ ++ID Sbjct: 250 LAFLIDLADEMWEGAFDILMNELRTYGQGLAEKPSIIVGTKID 292 >gi|298710555|emb|CBJ25619.1| PObg1, plastid Obg/CgtA-like GTPase 1 [Ectocarpus siliculosus] Length = 578 Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 125/289 (43%), Positives = 193/289 (66%), Gaps = 9/289 (3%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F D A++ +++G GG G I+ RREK I GGP+GGSGGRGG ++++ + LNTL R+ Sbjct: 115 QFFDTARINVKAGKGGNGCIATRREKGISMGGPNGGSGGRGGSIFLRCSEGLNTLAMVRH 174 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H++A G+ G ++R+G G DV ++ P+GT V +++G+ L +L + Q +++A GG Sbjct: 175 KVHYRATDGQNGQGKSRTGNSGADVYVSAPLGTVVRDQEGV-LCGELTEHDQELLVARGG 233 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN FK+S ++ P + G G E+ + ++LKL+AD+G +G+PNAGKST LA + Sbjct: 234 RGGRGNEAFKTSRSKIPMFGEKGEPGGERWLSMELKLVADVGFVGVPNAGKSTLLAVSSN 293 Query: 182 AKPKIADYPFTTLYPNLGIV-------KEGY-KEFILADIPGIIKNAHQGAGIGDRFLKH 233 AKPKIADYPFTT+ PNLG+ + G K +LADIPG+++ AH+G G+G FL+H Sbjct: 294 AKPKIADYPFTTVTPNLGVCDVLGDEAEAGMDKGLVLADIPGLLEGAHEGVGLGLAFLRH 353 Query: 234 TERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 +R VL+H+VS + Y+ I EL ++ +L KK ++V L++ID Sbjct: 354 VQRCRVLVHLVSGDSVDPVGDYRAIQQELELFSPKLLKKQQVVVLTKID 402 >gi|227824787|ref|ZP_03989619.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226905286|gb|EEH91204.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 426 Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 134/324 (41%), Positives = 206/324 (63%), Gaps = 6/324 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F D+A++Y+ +G GG G SFRREKF+ GGPDGG+GGRGG V++ A +LNTL+DFR Sbjct: 1 MLFTDKARIYVEAGSGGDGASSFRREKFVAHGGPDGGNGGRGGSVYLVAYKDLNTLVDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F A G G +N +G K DV + VP+GT V ++ ++ DL EG R + A G Sbjct: 61 YKRKFVASRGGNGSAKNCTGPKAPDVEVKVPMGTVVIDDATGVVLADLSHEGDRFLAAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA + +ST Q +A G G + + L+LKL+AD+G++G P+ GKS+ +A V+ Sbjct: 121 GRGGKGNACYVTSTKQGVTFAEKGEPGTKGWLRLELKLLADVGMVGYPSVGKSSIVARVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P++A Y FTTL P LG+V+ + F+LAD+PG+I A +G G+G FL+H ERT V Sbjct: 181 AARPEVAAYHFTTLTPVLGVVRLDEENSFVLADLPGLIDGASKGVGLGHDFLRHIERTRV 240 Query: 240 LLHIV----SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 +LHIV S + V+ ++ I +EL+ Y+ +L K+ ++V +++D ++ + Sbjct: 241 ILHIVDTSGSEGRDPVE-DFKKINEELALYSDKLVKRPQLVVANKMDLPGAEENYPALEK 299 Query: 296 LATQCGQVPFEFSSITGHGIPQIL 319 T+ G + S+ TG G+ ++ Sbjct: 300 YVTEKGYPIMKASAATGDGLRTVM 323 >gi|145296325|ref|YP_001139146.1| GTPase ObgE [Corynebacterium glutamicum R] gi|261266804|sp|A4QG78|OBG_CORGB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|140846245|dbj|BAF55244.1| hypothetical protein [Corynebacterium glutamicum R] Length = 501 Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 143/343 (41%), Positives = 211/343 (61%), Gaps = 23/343 (6%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++ +GDGG G +S REKF GGPDGG+GG GGD+ ++ T+ ++TL+DF + Sbjct: 3 RFIDRVVLHLAAGDGGNGCVSVHREKFKPLGGPDGGNGGHGGDIILEVTAQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H KA+ G G +R+GA+G+D+VL VP GT V E G +L DL G + I A GG Sbjct: 63 HPHVKAERGANGAGDHRNGARGKDLVLEVPPGTVVLNEKGETL-ADLTSVGMKFIAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 NGG GNA S +AP +A G G+ + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 NGGLGNAALASKARKAPGFALIGEPGEAHDLILELKSMADVGLVGFPSAGKSSLISVMSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKI DYPFTTL PNLG+V G++ F +AD+PG+I A +G G+G FL+H ERT VL+ Sbjct: 182 AKPKIGDYPFTTLQPNLGVVNVGHETFTMADVPGLIPGASEGKGLGLDFLRHIERTSVLV 241 Query: 242 HIVS---------------ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 H+V ALE + AAYQ LDE + +L ++ IV L++ D ++ Sbjct: 242 HVVDTATMDPGRDPISDIEALEAEL-AAYQSALDEDTGLG-DLSQRPRIVVLNKADVPEA 299 Query: 287 DTLAR-KKNELATQCGQVPFEFSSITGHGIP----QILECLHD 324 + LA K ++ Q G F S++ G+ ++LE + D Sbjct: 300 EELAEFLKEDIEKQFGWPVFIISAVARKGLDPLKYKLLEIVQD 342 >gi|269794465|ref|YP_003313920.1| GTP-binding protein Obg/CgtA [Sanguibacter keddieii DSM 10542] gi|269096650|gb|ACZ21086.1| GTP-binding protein Obg/CgtA [Sanguibacter keddieii DSM 10542] Length = 517 Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 127/341 (37%), Positives = 197/341 (57%), Gaps = 14/341 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ G+GG G S RREKF GPDGG+GG GG + ++ + TL++F + Sbjct: 4 FVDRVVLHASGGNGGNGCASIRREKFKPLAGPDGGAGGMGGSIILRVDGQVTTLLEFHHL 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H A G +GM R GA GED++L+VP GT V + DG +++ DL G ++A GG+ Sbjct: 64 PHRSAPSGTQGMGDYRQGANGEDMILSVPDGTVVKDTDG-NVLADLIGLGAEYVVAEGGH 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN S +AP +A G G E + L+LK IAD+ ++G P+AGKS+ +A+++ A Sbjct: 123 GGLGNNALASKNRKAPGFALLGEPGNEASVVLELKTIADVALVGYPSAGKSSLIAAISAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G + +AD+PG+I+ A +G G+G FL+H ER VL+H Sbjct: 183 RPKIADYPFTTLVPNLGVVQAGSSRYTVADVPGLIEGASEGKGLGLEFLRHIERCAVLVH 242 Query: 243 IVSALE----ENVQAAYQCILDELSAYNSELR---------KKIEIVGLSQIDTVDSDTL 289 ++ + + + I EL+AY +L+ ++ +V L+++D ++ L Sbjct: 243 VLDCATLDPGRDPVSDLEVIEQELAAYAPDLQSDGSRIPLNERPRVVVLNKVDVPEAREL 302 Query: 290 ARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 A G FE S+ + G+ Q+ L + + R Sbjct: 303 AEMVRPEFEARGVKVFEVSAASHEGLKQLTYVLAEYVERAR 343 >gi|29832012|ref|NP_826646.1| GTPase ObgE [Streptomyces avermitilis MA-4680] gi|81838203|sp|Q82C85|OBG_STRAW RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|29609130|dbj|BAC73181.1| putative GTP-binding protein [Streptomyces avermitilis MA-4680] Length = 479 Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 132/333 (39%), Positives = 203/333 (60%), Gaps = 7/333 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G GG G S REKF GGPDGG+GGRGGDV + ++ TL+D+ ++ Sbjct: 4 FVDRVELHVAAGSGGHGCASVHREKFKPLGGPDGGNGGRGGDVILVVDQSVTTLLDYHHK 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H A +G+ G NRSG G+D++L VP GT + ++ G +++ DL G + A GG Sbjct: 64 PHRSATNGKPGEGGNRSGKDGQDLILPVPDGTVIQDKAG-NVLADLVGHGTSYVAAQGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G + I L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALASARRKAPGFALLGEPGDFQDIVLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGSTVYTIADVPGLIPGASQGKGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK-KNELA 297 ++ + LE + + I +EL+ Y L + +V L++ID D LA + EL Sbjct: 243 VLDTATLESDRDPVSDLDIIEEELTQYGGGLNNRPRMVVLNKIDVPDGKDLAEMVRPELE 302 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 + +V FE S++ G+ ++ L + + + R Sbjct: 303 ARGYRV-FEVSAVAHMGLKELSFALAELVGAAR 334 >gi|304436702|ref|ZP_07396671.1| obg family GTPase CgtA [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370398|gb|EFM24054.1| obg family GTPase CgtA [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 427 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 135/325 (41%), Positives = 209/325 (64%), Gaps = 6/325 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D A++ +++GDGG G +FR EKF+ GGP GG GGRGGDV +A NLNTL+ FR Sbjct: 1 MQFIDRAQITVKAGDGGHGKSAFRHEKFMPKGGPSGGDGGRGGDVIFRADRNLNTLLSFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F A++GE G +N+ G + + VP GT V +E ++ DL + G ++A G Sbjct: 61 YRRKFVAKNGENGEYKNQFGKNAAPLYVDVPPGTIVMDEATGEVLADLAEIGMEAVIARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F +S N+AP +A G G+ + + L+LKL+AD+G++G P+ GKS+ +AS + Sbjct: 121 GRGGRGNAKFANSANRAPSFAEFGEPGEGRKLRLELKLLADVGLVGYPSVGKSSLVASCS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P+IADY FTT+ P LG+V+ Y K F++ADIPG+I+ A G G+G FL+H ERT + Sbjct: 181 AARPEIADYHFTTITPVLGVVQTDYEKSFVMADIPGLIEGAADGVGLGHDFLRHVERTRL 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 +LHIV A + V+ Y+ I EL+ Y+ ++ ++ + + ++ID + + E Sbjct: 241 ILHIVDASGIEGRDPVEDYYK-INAELARYSEKIARRTQFLVANKIDLPSAAEHLPRLKE 299 Query: 296 LATQCGQVPFEFSSITGHGIPQILE 320 LA Q G F S+ T G+ ++++ Sbjct: 300 LAAQEGLAFFAISAATREGVQELID 324 >gi|325282728|ref|YP_004255269.1| GTPase obg [Deinococcus proteolyticus MRP] gi|324314537|gb|ADY25652.1| GTPase obg [Deinococcus proteolyticus MRP] Length = 431 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 137/330 (41%), Positives = 211/330 (63%), Gaps = 5/330 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F D ++ + +G+GG G +SF REK++E GGPDGG GGRGG V ++AT + +L Sbjct: 1 MAFRDTLEIEVAAGNGGDGAMSFHREKYLEKGGPDGGHGGRGGSVILRATEGVESLERMV 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ FKA++G G R R G GED+ + VPVGT F+ D ++ DL + GQ+ ++A G Sbjct: 61 GKRKFKAENGRYGEGRLRQGRDGEDMYIDVPVGTTAFDRDTGRVVADLTETGQQHVVARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN+ F S+T QAP +A GI GQ++ + L+L+LIAD+G++G PNAGKS+ LA+++ Sbjct: 121 GAGGRGNSTFVSATRQAPRFAELGIPGQKRRLRLELRLIADVGLVGYPNAGKSSLLAALS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKE--GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 AKP IADYPFTTL PNLG+V++ G + F LADIPGII+ A +G G+ FL+H RT Sbjct: 181 NAKPGIADYPFTTLSPNLGVVEQEGGDERFTLADIPGIIEGASEGKGL--EFLRHISRTR 238 Query: 239 VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 +L+ ++ V+ Q ++ EL +Y+ +L ++ L++++ V+ D +++LA Sbjct: 239 LLVFVLDVTVNPVEELRQ-LMAELRSYDPQLLDAPALIALNKVELVEEDIALMVEDDLAA 297 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFS 328 + G S+ G G+ + + D + S Sbjct: 298 EFGMAVLPVSAKEGQGLGDLRATIFDLLPS 327 >gi|19553556|ref|NP_601558.1| GTPase ObgE [Corynebacterium glutamicum ATCC 13032] gi|62391200|ref|YP_226602.1| GTPase ObgE [Corynebacterium glutamicum ATCC 13032] gi|97217907|sp|P0C1E6|OBG_CORGL RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|21325128|dbj|BAB99750.1| Predicted GTPase [Corynebacterium glutamicum ATCC 13032] gi|41326540|emb|CAF21022.1| Predicted GTPase [Corynebacterium glutamicum ATCC 13032] Length = 501 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 142/343 (41%), Positives = 211/343 (61%), Gaps = 23/343 (6%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++ +GDGG G +S REKF GGPDGG+GG GGD+ ++ T+ ++TL+DF + Sbjct: 3 RFIDRVVLHLAAGDGGNGCVSVHREKFKPLGGPDGGNGGHGGDIILEVTAQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H KA+ G G +R+GA+G+D+VL VP GT V E G +L DL G + I A GG Sbjct: 63 HPHVKAERGANGAGDHRNGARGKDLVLEVPPGTVVLNEKGETL-ADLTSVGMKFIAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 NGG GNA S +AP +A G G+ + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 NGGLGNAALASKARKAPGFALIGEPGEAHDLILELKSMADVGLVGFPSAGKSSLISVMSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKI DYPFTTL PNLG+V G++ F +AD+PG+I A +G G+G FL+H ERT VL+ Sbjct: 182 AKPKIGDYPFTTLQPNLGVVNVGHETFTMADVPGLIPGASEGKGLGLDFLRHIERTSVLV 241 Query: 242 HIVS---------------ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 H+V ALE + AAYQ LDE + +L ++ +V L++ D ++ Sbjct: 242 HVVDTATMDPGRDPISDIEALEAEL-AAYQSALDEDTGLG-DLSQRPRLVVLNKADVPEA 299 Query: 287 DTLAR-KKNELATQCGQVPFEFSSITGHGIP----QILECLHD 324 + LA K ++ Q G F S++ G+ ++LE + D Sbjct: 300 EELAEFLKEDIEKQFGWPVFIISAVARKGLDPLKYKLLEIVQD 342 >gi|294629326|ref|ZP_06707886.1| GTP-binding protein [Streptomyces sp. e14] gi|292832659|gb|EFF91008.1| GTP-binding protein [Streptomyces sp. e14] Length = 478 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 134/332 (40%), Positives = 193/332 (58%), Gaps = 6/332 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G+GG G S REKF GGPDGG+GGRGGDV + ++ TL+D+ + Sbjct: 4 FVDRVELHVAAGNGGHGCASVHREKFKPLGGPDGGNGGRGGDVILTVDQSVTTLLDYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG G D+VL VP GT V + G +++ DL G + A GG Sbjct: 64 PHRKATNGKPGEGGNRSGKDGADLVLPVPDGTVVLDRAG-NVLADLVGHGTSYVAAQGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G I L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALASARRKAPGFALLGEPGDVGDIVLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGSTVYTVADVPGLIPGASQGRGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + LE + I +EL Y L + IV L++ID D LA Sbjct: 243 VLDTATLESDRDPVSDLDVIEEELRQYGG-LGNRPRIVVLNKIDVPDGKDLAEMVRPDLE 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G FE S++ G+ ++ L + + R Sbjct: 302 SRGYRVFEVSAVAHTGLKELSYALAELVAGAR 333 >gi|313115673|ref|ZP_07801128.1| Obg family GTPase CgtA [Faecalibacterium cf. prausnitzii KLE1255] gi|310622000|gb|EFQ05500.1| Obg family GTPase CgtA [Faecalibacterium cf. prausnitzii KLE1255] Length = 427 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 124/280 (44%), Positives = 184/280 (65%), Gaps = 9/280 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A +++ +G GG G +SF REKF+ GGPDGG GGRGGD+ +L TL+DFRY+ Sbjct: 7 FIDIATIWLHAGKGGDGAVSFHREKFVAAGGPDGGDGGRGGDIIFVVDDHLTTLMDFRYK 66 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A G KG G E++V+ VP+GT + + + +I DL + + +A GG Sbjct: 67 RKYVAPEGGKGGASLCHGKNAENLVIKVPLGTVIKDAESGLVIADL-SDHTPVTIAKGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG+GNAHF + T Q P +A PG+ G++ + L+LKLIAD+G+IG PN GKST +++++ A Sbjct: 126 GGYGNAHFATPTRQIPKFAKPGMPGEDIQVTLELKLIADVGLIGFPNVGKSTLISTISAA 185 Query: 183 KPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 KPKIA+Y FTTL P LG+V EG F+ ADIPG+I+ A +G G+G FL+H ER +L Sbjct: 186 KPKIANYHFTTLVPTLGVVSVAEG-ASFVCADIPGLIEGASEGIGLGHDFLRHVERCRLL 244 Query: 241 LHIV----SALEENVQAAYQCILDELSAYNSELRKKIEIV 276 LH+V S E ++ ++ I +EL+ ++ L ++ +IV Sbjct: 245 LHVVDVSGSECREPIE-DFEKINEELAKFSPVLAERPQIV 283 >gi|294055319|ref|YP_003548977.1| GTP-binding protein Obg/CgtA [Coraliomargarita akajimensis DSM 45221] gi|293614652|gb|ADE54807.1| GTP-binding protein Obg/CgtA [Coraliomargarita akajimensis DSM 45221] Length = 346 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 134/335 (40%), Positives = 194/335 (57%), Gaps = 8/335 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F DE KV I +G GG G SFRR K+ GGPDGG+GGRGGDV+I N L D+ ++ Sbjct: 2 FYDEVKVSISAGKGGDGCFSFRRAKYEPKGGPDGGNGGRGGDVYIIGDHNKADLTDYYFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +KA +GE G N+ GA GED+ + +PVGT + + + I ++ ++GQRI + GG Sbjct: 62 PIWKAANGEPGRGSNQHGAGGEDLEMRLPVGTILQDRETGEAIAEVVEDGQRICVMRGGE 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FKSSTNQAP G G L +K IAD+G+IG PNAGKST L T A Sbjct: 122 GGKGNTMFKSSTNQAPREFTLGKPGGGGDFKLVIKTIADVGLIGFPNAGKSTLLNMTTNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 PK YPFTT++P +G+++ E Y+ LADIPG+I+ A + G+G RFLKH ER VL Sbjct: 182 HPKTGAYPFTTMFPTVGVLEFPEQYERITLADIPGLIEGASENRGLGHRFLKHVERCKVL 241 Query: 241 LHIVSALEENVQ---AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 L ++ + + A + +++EL Y L +K ++ +++D D+ L Sbjct: 242 LVMIDMQGTDGREPIADIRVLMNELKLYKPGLVRKPILIAANKMDEPDA---PENLKILQ 298 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + + F S ++ G P++ + L + + +R E Sbjct: 299 KKVKEPLFPISCVSDEGFPELKQALLEAVLEVRRE 333 >gi|237750724|ref|ZP_04581204.1| GTPase ObgE [Helicobacter bilis ATCC 43879] gi|229373814|gb|EEO24205.1| GTPase ObgE [Helicobacter bilis ATCC 43879] Length = 409 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 121/245 (49%), Positives = 169/245 (68%), Gaps = 1/245 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++I SG GGAG +SFRREKF+ GGPDGG GGRGGDV+ N TL FR Sbjct: 2 FVDSVSIFIGSGHGGAGAVSFRREKFVIQGGPDGGDGGRGGDVYFLVDKNTTTLAKFRGH 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A +G GM +N +G KG+D+V+ VP GTQ+ E+ ++ DL +G+++ L GG Sbjct: 62 KKFLAGNGMPGMGKNCNGKKGKDIVIKVPPGTQIINEENNEILLDLLIDGEKVKLLSGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+++NQ P YA G+ G + L+LKLIADI ++G PN GKS+ ++++T A Sbjct: 122 GGLGNTHFKNASNQRPTYAQKGLPGISLQVRLELKLIADIALVGFPNVGKSSLISTITNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADY FTTL PNLG+V + F++ADIPG+I+ A G G+G +FL+H ERT +LL Sbjct: 182 RPKIADYAFTTLIPNLGVVDIDDLHSFVIADIPGLIQGASTGKGLGLQFLQHIERTKLLL 241 Query: 242 HIVSA 246 ++ + Sbjct: 242 FMLDS 246 >gi|148272671|ref|YP_001222232.1| GTPase ObgE [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|261266731|sp|A5CR32|OBG_CLAM3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|147830601|emb|CAN01537.1| putative GTP-binding protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 512 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 129/338 (38%), Positives = 201/338 (59%), Gaps = 12/338 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++R+G+GG G +S RREKF GPDGG+GG GGD+ + A + TL+ + Sbjct: 4 FVDTVTLHLRAGNGGNGCVSVRREKFKPLAGPDGGNGGNGGDIVLVADPQVTTLLAYHRG 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H +++G GM +R G GE + L VPVGT V + DG L D+ G R I A G Sbjct: 64 PHRSSRNGGPGMGDHRHGTLGEALELHVPVGTVVKDADGNEL-ADMATPGMRFIAAEAGQ 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA ++ +AP +A G G E + L+LK++AD+ ++G P+AGKS+ +A+++ A Sbjct: 123 GGLGNASLATTKRKAPGFALLGTRGYEGDVVLELKVVADVALVGYPSAGKSSLVAAISAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL+PNLG+V+ + +AD+PG+I+ A +G G+G FL+H ER LLH Sbjct: 183 KPKIADYPFTTLHPNLGVVEVADSRYTVADVPGLIEGASEGKGLGLEFLRHVERCSALLH 242 Query: 243 IVSALE----ENVQAAYQCILDELSAY-----NSELRKKIEIVGLSQIDTVDSDTLAR-K 292 ++ + + IL EL+AY L + +++ L++ID ++ LA Sbjct: 243 VLDCATLDPGRDPISDLDIILTELAAYPVPDGQVPLLDRPQLIALNKIDVPEARELAELV 302 Query: 293 KNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 + EL + +V F+ S+++ G+ Q+ L + + R Sbjct: 303 RPELEARGYRV-FDISTVSHDGLRQLSFALAELVEDAR 339 >gi|238926180|ref|ZP_04657940.1| spo0B-associated GTP-binding protein [Selenomonas flueggei ATCC 43531] gi|238885860|gb|EEQ49498.1| spo0B-associated GTP-binding protein [Selenomonas flueggei ATCC 43531] Length = 463 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 135/325 (41%), Positives = 209/325 (64%), Gaps = 6/325 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D A++ +++GDGG G +FR EKF+ GGP GG GGRGGDV +A NLNTL+ FR Sbjct: 37 MQFIDRAQITVKAGDGGHGKSAFRHEKFMPKGGPSGGDGGRGGDVIFRADRNLNTLLSFR 96 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y++ F A++GE G +N+ G + + VP GT V +E ++ DL + G ++A G Sbjct: 97 YRRKFVAKNGENGEYKNQFGKNAAPLYVDVPPGTIVTDEATGEVLADLAEIGMEAVIARG 156 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F +S N+AP +A G G+ + + L+LKL+AD+G++G P+ GKS+ +AS + Sbjct: 157 GRGGRGNAKFANSANRAPSFAEFGEPGEGRKLRLELKLLADVGLVGYPSVGKSSLVASCS 216 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P+IADY FTT+ P LG+V+ Y K F++ADIPG+I+ A G G+G FL+H ERT + Sbjct: 217 AARPEIADYHFTTITPVLGVVQTDYEKSFVMADIPGLIEGAADGVGLGHDFLRHVERTRL 276 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 +LHIV A + V+ Y+ I EL+ Y+ ++ ++ + + ++ID + + E Sbjct: 277 ILHIVDASGIEGRDPVEDYYK-INAELARYSEKIARRTQFLVANKIDLPSAAEHLPRLKE 335 Query: 296 LATQCGQVPFEFSSITGHGIPQILE 320 LA Q G F S+ T G+ ++++ Sbjct: 336 LAAQEGLAFFAISAATREGVQELID 360 >gi|269957045|ref|YP_003326834.1| GTP-binding protein Obg/CgtA [Xylanimonas cellulosilytica DSM 15894] gi|269305726|gb|ACZ31276.1| GTP-binding protein Obg/CgtA [Xylanimonas cellulosilytica DSM 15894] Length = 503 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 132/327 (40%), Positives = 194/327 (59%), Gaps = 18/327 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ GDGG G S RREKF GPDGG+GG GG V + TL+ + + Sbjct: 4 FVDRVVLHASGGDGGHGVASIRREKFKPLAGPDGGNGGDGGSVLLVVDPQTTTLLTYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H A +G +GM +R GAKGED+VL VP GT V + DG +++ DL G + ++A GG Sbjct: 64 PHRHATNGTQGMGDDRDGAKGEDLVLAVPDGTVVKDLDG-NVLADLVGAGTQYVVAAGGK 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN S +AP +A G G+ I L+LK IAD+ ++G P+AGKS+ +A+++ A Sbjct: 123 GGLGNRALASPKRKAPGFALLGEPGESADIVLELKTIADVALVGFPSAGKSSLIAAISAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G + +AD+PG+I A +G G+G FL+H ERT V++H Sbjct: 183 RPKIADYPFTTLVPNLGVVEAGDTRYTVADVPGLIPGASEGKGLGLEFLRHIERTAVVVH 242 Query: 243 IVSALEENVQAAYQCILD------ELSAYNSELR-------KKIEIVGLSQIDTVDSDTL 289 ++ ++ I D EL+AY +L ++ +V L++ID ++ L Sbjct: 243 VLDC--ATLEPGRDPITDLDIIEAELAAYAEDLEIGRVPLAERPRLVVLNKIDVPEAREL 300 Query: 290 AR-KKNELATQCGQVPFEFSSITGHGI 315 A K EL + +V FE S+ + G+ Sbjct: 301 AEFVKPELEARGLRV-FEVSTASHEGL 326 >gi|302560677|ref|ZP_07313019.1| GTP-binding protein [Streptomyces griseoflavus Tu4000] gi|302478295|gb|EFL41388.1| GTP-binding protein [Streptomyces griseoflavus Tu4000] Length = 480 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 132/333 (39%), Positives = 197/333 (59%), Gaps = 6/333 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G+GG G S REKF GGPDGG+GGRGGDV + ++ TL+D+ + Sbjct: 4 FVDRVELHVAAGNGGHGCASVHREKFKPLGGPDGGNGGRGGDVILTVDQSVTTLLDYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG G+D+VL VP GT V ++ G +++ DL G + A GG Sbjct: 64 PHRKATNGKPGEGGNRSGKDGQDLVLPVPDGTVVLDKAG-NVLADLVGHGTAYVAAQGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G + I L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALASARRKAPGFALLGEPGDLQDIVLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGSTVYTIADVPGLIPGASQGKGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + LE + + I +EL Y L + +V L++ID D LA Sbjct: 243 VLDTATLESDRDPLSDLDIIEEELRQYGG-LDNRPRVVVLNKIDVPDGKDLAELVRPDLE 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 + G E S++ G+ ++ L + + R Sbjct: 302 ERGYRVLEVSAVAHMGLKELSFALAELVARARA 334 >gi|269303419|gb|ACZ33519.1| GTP-binding protein Obg/CgtA [Chlamydophila pneumoniae LPCoLN] Length = 335 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 120/292 (41%), Positives = 189/292 (64%), Gaps = 7/292 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ + +R+G GG G +++R+EK++ GGP GG+GG GG V I+AT+N+ + +R Sbjct: 2 FVDQITLELRAGKGGNGVVAWRKEKYLPKGGPYGGNGGNGGSVIIEATTNVYSFEAYRNI 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KA G+ G NR+G G+D++++VP GT + + + ++ D +G+R++++ GG Sbjct: 62 RFLKAPDGQSGATNNRTGRSGKDLIVSVPTGTLLRDAETGEILHDFTVDGERLLVSQGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK+S N+AP A PG G+ + + L+LKLIADIG++G PNAGKST ++ Sbjct: 122 GGKGNTFFKTSVNRAPTKATPGKPGEIRQVELELKLIADIGLVGFPNAGKSTLFNTLAHT 181 Query: 183 KPKIADYPFTTLYPNLGIV----KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 + K+ YPFTTL P+LG+V + K +I+ADIPGII+ AHQ G+G FL+H ERT Sbjct: 182 EVKVGAYPFTTLAPSLGLVLCNDRLYQKPWIIADIPGIIEGAHQNKGLGLDFLRHIERTL 241 Query: 239 VLLHI--VSALEENV-QAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 +LL + VS E N + + ++ EL ++ + KK +V L++ID + D Sbjct: 242 LLLFVIDVSKRERNSPEEDLETLIHELHSHQPDFEKKDMLVALNKIDDLLPD 293 >gi|85057906|ref|YP_456822.1| GTPase ObgE [Aster yellows witches'-broom phytoplasma AYWB] gi|123518045|sp|Q2NIK0|OBG_AYWBP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|84790011|gb|ABC65743.1| GTP-binding protein [Aster yellows witches'-broom phytoplasma AYWB] Length = 419 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 119/286 (41%), Positives = 184/286 (64%), Gaps = 1/286 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DEA + +G+GG G ++FRREK++ FGGP GG+GG GG V NTL+ + Sbjct: 1 MHFVDEAFNEVFAGNGGHGIVAFRREKYVAFGGPAGGNGGNGGSVIFVGDKGENTLLKLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ+H KA HG G + ++GA + + VP+GT + D + ++ + Q +++A G Sbjct: 61 YQKHLKAPHGINGKNKGQNGANAPHLYVKVPLGTVFYTADN-KFLGEILYDQQTLVIAKG 119 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN + NQAP Y+ G LG+ I +LK++ADIG++G P+ GKS+ +++++ Sbjct: 120 GKGGKGNKALATFKNQAPSYSEKGDLGESFKIKTELKVLADIGLLGFPSVGKSSLISAIS 179 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +A+PK+A YPFTT+ P+LG+V+ F++AD+PG+I+NAH G G+G +FLKH ER VL Sbjct: 180 KAQPKVASYPFTTIKPHLGVVEVDGFSFVVADLPGLIENAHLGCGMGIQFLKHIERCRVL 239 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 +HI+S N +Q + EL YN +L K +I+ +++D DS Sbjct: 240 VHILSMESSNPYQDFQTLNQELKQYNPQLLLKKQIIVTNKMDLPDS 285 >gi|328957586|ref|YP_004374972.1| GTPase Obg [Carnobacterium sp. 17-4] gi|328673910|gb|AEB29956.1| GTPase Obg [Carnobacterium sp. 17-4] Length = 438 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 125/284 (44%), Positives = 184/284 (64%), Gaps = 4/284 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++GDGG G ++FRREKF+ GGP GG GG+GGDV L TL+DFR+ Sbjct: 2 FLDQVTINVKAGDGGNGMVAFRREKFVPDGGPAGGDGGKGGDVVFIVDEGLRTLMDFRFN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKA+ GE GM +N G D V+ VP GT V E + ++ DL G +I++A GG Sbjct: 62 RHFKAEDGENGMSKNMHGRGAGDNVIKVPPGTTVIEAETGKVLGDLVHHGHKIVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F + N AP A G G++ I ++LK++AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNSRFATPRNPAPEIAENGEPGEDYKIEMELKVLADVGLVGFPSVGKSTLLSVVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V+ + F++AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 182 RPKIGAYHFTTLVPNLGMVQTPDGRSFVMADLPGLIEGASQGIGLGTQFLRHIERTRVIL 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 H++ S E + Y I EL +N L ++ +I+ +++D Sbjct: 242 HVIDMSGSEGRDPYDDYVAINKELETHNLRLMERPQIIVANKMD 285 >gi|239931315|ref|ZP_04688268.1| GTPase ObgE [Streptomyces ghanaensis ATCC 14672] gi|291439689|ref|ZP_06579079.1| GTP-binding protein [Streptomyces ghanaensis ATCC 14672] gi|291342584|gb|EFE69540.1| GTP-binding protein [Streptomyces ghanaensis ATCC 14672] Length = 481 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 133/333 (39%), Positives = 197/333 (59%), Gaps = 6/333 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G+GG G S REKF GGPDGG+GGRGGDV + ++ TL+D+ + Sbjct: 4 FVDRVELHVAAGNGGHGCASVHREKFKPLGGPDGGNGGRGGDVILTVDQSVTTLLDYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG G+D+VL VP GT V ++ G +++ DL G + A GG Sbjct: 64 PHRKATNGKPGEGGNRSGKDGQDLVLPVPDGTVVLDKAG-NVLADLVGHGTSYVAAQGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G + I L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALASARRKAPGFALLGEPGDLQDIVLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A +G G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGSTVYTIADVPGLIPGASRGKGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + LE + + I +EL Y L + IV L++ID D LA Sbjct: 243 VLDTATLESDRDPLSDLDVIEEELRQYGG-LDDRPRIVVLNKIDVPDGKDLAEMVRPDLE 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 G FE S++ G+ ++ L + + R Sbjct: 302 ARGYRVFEVSAVAHIGLRELSFALAELVARARA 334 >gi|229820116|ref|YP_002881642.1| GTP-binding protein Obg/CgtA [Beutenbergia cavernae DSM 12333] gi|229566029|gb|ACQ79880.1| GTP-binding protein Obg/CgtA [Beutenbergia cavernae DSM 12333] Length = 519 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 130/343 (37%), Positives = 198/343 (57%), Gaps = 14/343 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 F+D ++ GDGG G +S REKF GGPDGG+GG GG V + + TL+D+ + Sbjct: 3 SFVDRVTLHAVGGDGGNGCVSVHREKFKPLGGPDGGNGGDGGAVILAVDPQVTTLLDYHH 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H A+ G +G R G G+DVVL VP GT V DG ++ DL G+ ++A GG Sbjct: 63 RPHRSARSGTQGKGDLRHGKGGDDVVLPVPSGTVVRAADG-EILADLVGPGETFVVASGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+E+ I L+LK +AD+ ++G P+AGKS+ +A+++ Sbjct: 122 RGGLGNAALASQRRKAPGFALLGEPGEERDIVLELKSVADVALVGYPSAGKSSLVAAMSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A+PKIADYPFTTL PNLG+V+ G + F +AD+PG+I A +G G+G FL+H ER V++ Sbjct: 182 ARPKIADYPFTTLTPNLGVVEAGSERFTVADVPGLIPGASEGRGLGLEFLRHIERCAVIV 241 Query: 242 HIV--SALE--ENVQAAYQCILDELSAY---------NSELRKKIEIVGLSQIDTVDSDT 288 H++ + LE + IL EL+AY + L ++ +++ L++ID ++ Sbjct: 242 HVIDCATLEPRRDPLTDLDVILAELAAYAPDLDIAGGRTPLLERPQLIALNKIDVPEARE 301 Query: 289 LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 LA + G E S+ + G+ + L + + R Sbjct: 302 LAELVRPELEERGYRVVEISTASHEGLRSLSFALAELVTQARA 344 >gi|308177598|ref|YP_003917004.1| Obg family GTP-binding protein [Arthrobacter arilaitensis Re117] gi|307745061|emb|CBT76033.1| Obg-family GTP-binding protein [Arthrobacter arilaitensis Re117] Length = 529 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 128/347 (36%), Positives = 205/347 (59%), Gaps = 17/347 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ +G+GG G +S +REKF GGPDGG+GG+GGD+ ++ + TL+DF + Sbjct: 4 FVDRVTLHVTAGNGGHGCVSIKREKFKPLGGPDGGNGGKGGDIILRVDPQVTTLLDFHHL 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +GE G G GED++L VP GT + +DG ++ DL ++G I A GG Sbjct: 64 PHRKAGNGEPGKGGLHPGKHGEDLILGVPAGTVIKTKDG-DILGDLVKQGDEFIAAIGGM 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S +AP +A GI G + + L+LK +ADI ++G P+AGKS+ +A+V+ A Sbjct: 123 GGLGNASIASDKRKAPGFALLGIPGTSQDVVLELKSMADIALVGYPSAGKSSLIAAVSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G F +AD+PG+I A +G G+G FL+H ER ++H Sbjct: 183 RPKIADYPFTTLVPNLGVVEAGETRFTVADVPGLIPGASEGKGLGHEFLRHVERCAAIVH 242 Query: 243 IV--SALEENVQ--AAYQCILDELSAYNSE------------LRKKIEIVGLSQIDTVDS 286 ++ ++LE + + I EL+ Y ++ L ++ +++ L+++D D Sbjct: 243 VLDCASLEADRDPISDLDIIEAELANYEADSTFAGTDGTIVPLIERPKLIALNKVDMPDG 302 Query: 287 DTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 +A + G FE S+++ +G+ + + + + R E Sbjct: 303 ADMAEFVRPELEKRGYRVFEISALSRNGLRDLSFAMAELVEQARAEQ 349 >gi|169628702|ref|YP_001702351.1| GTPase ObgE [Mycobacterium abscessus ATCC 19977] gi|261266884|sp|B1MMY5|OBG_MYCA9 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|169240669|emb|CAM61697.1| Probable GTP1/Obg-family GTP-binding protein [Mycobacterium abscessus] Length = 482 Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 140/344 (40%), Positives = 206/344 (59%), Gaps = 16/344 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ ++G GG G S REKF GGPDGG+GGRGG V ++ ++TL+DF + Sbjct: 3 RFVDRVVIHAKAGTGGHGCASVHREKFKPLGGPDGGNGGRGGSVILEVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H +A +G +GM +R+GA G+D++L VP GT V ++DG ++ DL G R A GG Sbjct: 63 HPHLQAPNGTQGMGGHRNGANGDDLILKVPDGTVVLDDDG-RILADLVGAGARFDAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G E + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 RGGLGNAALASRARKAPGFALLGEAGAEVDLTLELKTVADVGLVGFPSAGKSSLVSVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F++AD+PG+I A +G G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLVPNLGVVTTGENSFVMADVPGLIPGAAEGRGLGLEFLRHIERCAVLV 241 Query: 242 HIV--SALE------------ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 H+V + LE EN A YQ L + S +L + V L+++D ++D Sbjct: 242 HVVDCATLEPGRDPVSDIDALENELARYQPTLQDDSVLG-DLADRPRAVVLNKVDVPEAD 300 Query: 288 TLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 LA E +Q G F+ S++T G+ + L + I + R Sbjct: 301 ELADFVTEEVSQRGWPVFKVSTLTRDGLRPLTFALWEMIVAARA 344 >gi|223998004|ref|XP_002288675.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220975783|gb|EED94111.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 329 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 125/300 (41%), Positives = 183/300 (61%), Gaps = 5/300 (1%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 KF D A++++ GDGG G ++FRREK GGP+GG GG GG V+ A +LNTL R Sbjct: 1 KFFDTARLHVTGGDGGNGCVAFRREKGEAMGGPNGGRGGAGGSVYFVADESLNTLAGLRS 60 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H +A G G +N+ G G+DV++ VP GT V E + +L +G+ +++A GG Sbjct: 61 RIHVRAASGRNGTGKNKDGCLGDDVMVRVPCGTIVRELHTQKVAGELRTDGETLMVARGG 120 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA F + AP + G G E+ + ++L+L+AD+G +G+PNAGKST L+ + Sbjct: 121 RGGRGNAAFMTHRRTAPKFCEHGEPGAERWLSVELRLVADVGFLGMPNAGKSTLLSVASA 180 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIA+YPFTT+ PNLG+ G + +L DIPG+I+ A G G+G FL+H +R V Sbjct: 181 AKPKIANYPFTTITPNLGVCDLGEESSGLVLCDIPGLIEGASLGTGLGFSFLRHVQRCKV 240 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LLH+V E+ + + +EL YN L KK ++V L++ D + + K+ EL Q Sbjct: 241 LLHVVDGTSEDPIGDFNILNNELKMYNDLLGKKPQVVVLNKCDVPE---VQEKEEELVAQ 297 >gi|261886121|ref|ZP_06010160.1| GTPase ObgE [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 281 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 111/269 (41%), Positives = 169/269 (62%), Gaps = 15/269 (5%) Query: 65 FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGG 124 KA +G G+ RN +G KG+++ L VP GT V++ D L+ DL EGQ+ + GG GG Sbjct: 1 MKAANGVPGLPRNMTGKKGDNLELIVPPGTAVYDADSNELLLDLISEGQKELFLSGGKGG 60 Query: 125 FGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKP 184 G+ HFK+S NQAP A PG+ G+ + I L+LKLIAD+G++G PN GKST ++S++ AKP Sbjct: 61 IGSVHFKTSVNQAPTKAQPGLSGETRNIRLELKLIADVGLVGFPNVGKSTLISSISNAKP 120 Query: 185 KIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHI 243 +IA+Y FTTL P LG+V+ + + FI+ADIPGII+ A G G+G +FLKH ERT VLL++ Sbjct: 121 QIANYEFTTLTPKLGLVEVDEFSGFIMADIPGIIEGASDGKGLGIQFLKHIERTKVLLYM 180 Query: 244 VS-ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID-TVDSDTLAR---------K 292 + A +++ ++ + E+ ++ L K+ + L+++D VD+D K Sbjct: 181 IDLANYRSLKEQFETLKSEVLKFSPNLAKRDFAIALTRLDAAVDADEKIEEFLNEFKFDK 240 Query: 293 KNELATQCGQVPF---EFSSITGHGIPQI 318 K ++ Q PF SS+ G G+ ++ Sbjct: 241 KQDIYEYDRQKPFFVLPISSVAGDGLKEL 269 >gi|311896009|dbj|BAJ28417.1| putative GTP-binding protein [Kitasatospora setae KM-6054] Length = 486 Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 127/333 (38%), Positives = 197/333 (59%), Gaps = 6/333 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G+GG G S REKF GGPDGG+GG GG V + S + TL+++ + Sbjct: 4 FVDRVELHVAAGNGGHGCASVHREKFKPLGGPDGGNGGEGGSVILVVDSQVTTLLEYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 KA +G+ G +R+GA G D+VL VP GT V + G +++ DL G + A GG Sbjct: 64 PKRKATNGKPGAGGHRTGALGPDIVLPVPDGTVVLDRQG-NVLADLVGHGTSFVAAQGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G+ + I ++LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALASARRKAPGFALLGEPGEARDIVMELKSVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGETVYTIADVPGLIPGASQGRGLGLEFLRHVERCEVLVH 242 Query: 243 IV--SALE--ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + LE + + I DEL+ Y L + +V L+++D D +A Sbjct: 243 VLDCATLEPGRDPLTDLETIEDELAQYGG-LEDRPRLVALNKVDVPDGQDIADLTRASLE 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 + G FE S++ G+ ++ L + + + R Sbjct: 302 ERGYRVFEVSALAHKGLRELSFALAEIVSAARA 334 >gi|88855092|ref|ZP_01129757.1| GTP-binding protein [marine actinobacterium PHSC20C1] gi|88815620|gb|EAR25477.1| GTP-binding protein [marine actinobacterium PHSC20C1] Length = 516 Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 128/325 (39%), Positives = 206/325 (63%), Gaps = 10/325 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ +++ +G GG G +S +REKF GPDGG GG GGD+ + + + + TL+++ Sbjct: 4 FVDQVTLHLVAGHGGNGCVSVKREKFKPLAGPDGGKGGDGGDIVLVSDTQVTTLLNYHRS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H K+QHG+ G +++G G +++L VPVGT V + DG ++ D+D G R+I+ PGG Sbjct: 64 PHRKSQHGQPGQGDHKAGTAGAELLLPVPVGTVVRDADG-EVLLDMDVPGLRLIVGPGGQ 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G + I+L+LK +AD+ ++G P+AGKS+ +A+++ A Sbjct: 123 GGLGNAALSSTKRKAPGFALLGTPGYQGDIFLELKTVADVALVGYPSAGKSSLIAAMSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL+PNLG+V+ G + +AD+PG+I+ A +G G+G FL+H ER LLH Sbjct: 183 KPKIADYPFTTLHPNLGVVESGDIRYTIADVPGLIEGASEGKGLGLEFLRHVERCTALLH 242 Query: 243 IV--SALE--ENVQAAYQCILDELSAY-----NSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++ + LE + + IL EL+AY L ++ +++ L++ID D LA Sbjct: 243 VLDCATLEPGRDPISDLDVILGELAAYPVPEGQKPLLEREQLIALNKIDVPDGSDLANLV 302 Query: 294 NELATQCGQVPFEFSSITGHGIPQI 318 + + G FE S+++ G+ ++ Sbjct: 303 RKELEERGYRVFEVSAVSHKGLREL 327 >gi|72080383|ref|YP_287441.1| GTPase ObgE [Mycoplasma hyopneumoniae 7448] gi|123645321|sp|Q4A8X1|OBG_MYCH7 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|71913507|gb|AAZ53418.1| GTP-binding protein Obg [Mycoplasma hyopneumoniae 7448] Length = 419 Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 134/339 (39%), Positives = 201/339 (59%), Gaps = 15/339 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D + + +G GG G ISFRRE ++ GGPDGG GG GG ++ S +NTL+ F Sbjct: 1 MRFVDYVSIEVVAGKGGDGIISFRREAHVDKGGPDGGDGGWGGSIYFVGDSGMNTLLPFY 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + +GE G + ++GA G+D+ + VP+GTQVF + SLICD+ E ++ ++A G Sbjct: 61 QTKKIFGYNGENGRPKRQTGANGKDIFIKVPLGTQVFLKK--SLICDIILE-KKYLIAKG 117 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF++S N+AP + G LGQ + L+LK++ADIG++G PNAGKST L+ ++ Sbjct: 118 GRGGLGNFHFRNSKNKAPRISENGELGQNFYLDLQLKVMADIGLVGKPNAGKSTLLSLIS 177 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +KPKIA+Y FTTL P LG+VK F+ AD+PG+I+ A G G+G FLKH ER + Sbjct: 178 NSKPKIANYEFTTLVPQLGVVKIYENSFVTADLPGLIQGASSGKGMGIIFLKHIERCRAI 237 Query: 241 LHIVSALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 +H++ +N + I EL +N +L + L+QI + L + LA Sbjct: 238 VHVIDFGSDNKNPIKDFIEIKSELEKFNKKL------LDLNQIVIANKCDLPNFQFNLAN 291 Query: 299 QCGQVP---FEFSSITGHGIPQILECLHDKIFSIRGENE 334 + P SS+ +I + +K+F + GEN+ Sbjct: 292 FKRKFPKIKIIKSSLISAKQNEI-NIIKEKMFGLLGENQ 329 >gi|229918397|ref|YP_002887043.1| GTP-binding protein Obg/CgtA [Exiguobacterium sp. AT1b] gi|229469826|gb|ACQ71598.1| GTP-binding protein Obg/CgtA [Exiguobacterium sp. AT1b] Length = 429 Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 126/288 (43%), Positives = 190/288 (65%), Gaps = 4/288 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ +++++GDGG G ++FRREK++ GGP GG GG GGDV + L TL+DFRY Sbjct: 2 FVDQVNIFVKAGDGGKGMVAFRREKYVPDGGPAGGDGGHGGDVIFEVEEGLRTLVDFRYS 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A GEKGM + G K + +++ VP GT VF+ + ++I DL + GQ+ +A GG Sbjct: 62 KKFIAHDGEKGMSKGMHGRKAKPLIVKVPPGTIVFDAETDTVIADLTEHGQQATIAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G GQE+ + L+LKL+AD+G++G P+ GKST L+ V+ A Sbjct: 122 GGRGNCRFATPANPAPEIAENGEPGQERELRLELKLLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTT+ PNLG+VK + F++AD+PG+I+ A QG G+G +FL+H ERT V++ Sbjct: 182 RPKIGAYHFTTITPNLGVVKTADDRSFVMADLPGLIEGASQGVGLGHQFLRHIERTKVIV 241 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 H++ S +E + Y I EL +YN L ++ ++V +++D D+ Sbjct: 242 HMIDMSGMEGRDPFEDYTTINRELESYNLRLLERPQVVVANKMDMPDA 289 >gi|222153295|ref|YP_002562472.1| GTPase ObgE [Streptococcus uberis 0140J] gi|261277714|sp|B9DSH7|OBG_STRU0 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|222114108|emb|CAR42557.1| putative GTP-binding protein [Streptococcus uberis 0140J] Length = 438 Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 136/329 (41%), Positives = 208/329 (63%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G GG G ++FRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F+A+ GEKGM + G ED+++ VP GT V + + +I DL + GQ ++A GG Sbjct: 64 RKFRAKAGEKGMTKGMHGRGSEDLIVLVPQGTTVKDAETGKVITDLVENGQEYVIAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERELELELKILADVGLVGFPSVGKSTLLSVVSAA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGIGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT-LARKKNELA 297 H++ SA E + Y I +EL YN L ++ +I+ +++D +++ LA K +LA Sbjct: 244 HVIDMSASEGRDPYEDYVSINNELETYNLRLLERPQIIVANKMDMPEAEEHLAAFKEKLA 303 Query: 298 TQCGQ---VP--FEFSSITGHGIPQILEC 321 + + +P F S++ G+ +L+ Sbjct: 304 AEYDEFDDMPQIFPVSTLAKQGLDSLLDA 332 >gi|283457949|ref|YP_003362553.1| putative GTPase [Rothia mucilaginosa DY-18] gi|283133968|dbj|BAI64733.1| predicted GTPase [Rothia mucilaginosa DY-18] Length = 535 Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 127/330 (38%), Positives = 200/330 (60%), Gaps = 13/330 (3%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++ G GG G +S RREKF GGP+GG+GG GG V ++ + TL+++ + Sbjct: 3 EFVDRVVLHVSGGRGGNGCVSVRREKFKPLGGPNGGNGGNGGAVILRVDNQTTTLLEYHH 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H A +G+ G G GED+VLTVP GT V + +G +++ DL + G + A GG Sbjct: 63 SPHQHAPNGDIGRGDMHHGFNGEDLVLTVPQGTVVKDREG-NVLADLLRVGDEYVAARGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S+ +AP +A G G+E I L+LK IAD+ ++G P+AGKS+ +A+++ Sbjct: 122 MGGLGNAALASAKRKAPGFALLGTPGEEADIVLELKSIADVALVGYPSAGKSSLIAAISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A+PKIADYPFTTL PNLG+V+ G + +AD+PG+I+ A +G G+G RFL+H ER+ L+ Sbjct: 182 ARPKIADYPFTTLIPNLGVVQAGDVRYTVADVPGLIEGASEGRGLGHRFLRHVERSSALV 241 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNSE--------LRKKIEIVGLSQIDTVDSDTL 289 H++ + LE + + ++ I EL Y + L ++ +IV L++ID ++ L Sbjct: 242 HVIDCATLEPGRDPISDFEVIRGELENYEVDPTAGVTVPLHERPQIVVLNKIDVPEAREL 301 Query: 290 ARKKNELATQCGQVPFEFSSITGHGIPQIL 319 A + G FE S+ + G+ ++ Sbjct: 302 AEFVRPEFEEMGFKVFEISTASHEGLKSLI 331 >gi|255326319|ref|ZP_05367404.1| Spo0B-associated GTP-binding protein [Rothia mucilaginosa ATCC 25296] gi|255296613|gb|EET75945.1| Spo0B-associated GTP-binding protein [Rothia mucilaginosa ATCC 25296] Length = 535 Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 127/330 (38%), Positives = 200/330 (60%), Gaps = 13/330 (3%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++ G GG G +S RREKF GGP+GG+GG GG V ++ + TL+++ + Sbjct: 3 EFVDRVVLHVSGGRGGNGCVSVRREKFKPLGGPNGGNGGNGGAVILRVDNQTTTLLEYHH 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H A +G+ G G GED+VLTVP GT V + +G +++ DL + G + A GG Sbjct: 63 SPHQHAPNGDIGRGDMHHGFNGEDLVLTVPQGTVVKDREG-NVLADLLRVGDEYVAARGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S+ +AP +A G G+E I L+LK IAD+ ++G P+AGKS+ +A+++ Sbjct: 122 MGGLGNAALASAKRKAPGFALLGTPGEEADIVLELKSIADVALVGYPSAGKSSLIAAISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A+PKIADYPFTTL PNLG+V+ G + +AD+PG+I+ A +G G+G RFL+H ER+ L+ Sbjct: 182 ARPKIADYPFTTLIPNLGVVQAGDVRYTVADVPGLIEGASEGRGLGHRFLRHVERSSALV 241 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNSE--------LRKKIEIVGLSQIDTVDSDTL 289 H++ + LE + + ++ I EL Y + L ++ +IV L++ID ++ L Sbjct: 242 HVIDCATLEPGRDPISDFEVIRGELQNYEVDPTAGVTVPLHERPQIVVLNKIDVPEAREL 301 Query: 290 ARKKNELATQCGQVPFEFSSITGHGIPQIL 319 A + G FE S+ + G+ ++ Sbjct: 302 AEFVRPEFEEMGFKVFEISTASHEGLKSLI 331 >gi|39938575|ref|NP_950341.1| GTPase ObgE [Onion yellows phytoplasma OY-M] gi|81830068|sp|Q6YRC6|OBG_ONYPE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|39721684|dbj|BAD04174.1| conserved hypothetical protein [Onion yellows phytoplasma OY-M] Length = 422 Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 118/286 (41%), Positives = 185/286 (64%), Gaps = 1/286 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F+DEA + +G+GG G ++FRREK++ FGGP GG+GG+GG V + TL+ + Sbjct: 4 LHFVDEAFNEVFAGNGGHGIVAFRREKYVAFGGPAGGNGGKGGSVIFVGDKDETTLLKLK 63 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ+H KA HG G + ++GA + + VP+GT + D + ++ + Q +++A G Sbjct: 64 YQKHLKAPHGINGKNKGQNGANAPHLYVKVPLGTVFYTADN-KFLGEILYDQQTLVIAKG 122 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN + NQAP YA G LG+ I +LK++ADIG++G P+ GKS+ +++++ Sbjct: 123 GKGGKGNKALATFKNQAPSYAEKGDLGESFKIKTELKVLADIGLLGFPSVGKSSLISAIS 182 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +A+PK+A YPFTT+ P+LG+V+ F++AD+PG+I NAH G G+G +FLKH ER VL Sbjct: 183 KAQPKVASYPFTTIKPHLGVVEVDGFSFVVADLPGLIANAHLGCGMGIQFLKHIERCRVL 242 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 +HI+S N +Q + ELS YN +L K +I+ +++D D+ Sbjct: 243 VHILSMESANPYQDFQTLNQELSQYNPQLLLKKQIIVTNKMDLPDA 288 >gi|7189138|gb|AAF38079.1| GTP1/OBG family protein [Chlamydophila pneumoniae AR39] Length = 343 Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 127/328 (38%), Positives = 201/328 (61%), Gaps = 18/328 (5%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F+D+ + +R+G GG G +++R+EK++ GGP GG+GG GG V I+AT+++ + +R Sbjct: 8 IMFVDQITLELRAGKGGNGVVAWRKEKYLPKGGPYGGNGGNGGSVIIEATTSVYSFEAYR 67 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + KA G+ G NR+G G+D++++VP GT + + + ++ D +G+R++++ G Sbjct: 68 NIRFLKAPDGQSGATNNRTGRSGKDLIVSVPTGTLLRDAETGEILHDFTVDGERLLVSQG 127 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN FK+S N+AP A PG G+ + + L+LKLIADIG++G PNAGKST ++ Sbjct: 128 GKGGKGNTFFKTSVNRAPTKATPGKPGEIRQVELELKLIADIGLVGFPNAGKSTLFNTLA 187 Query: 181 RAKPKIADYPFTTLYPNLGIV----KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTER 236 + K+ YPFTTL P+LG+V + K +I+ADIPGII+ AHQ G+G FL+H ER Sbjct: 188 HTEVKVGAYPFTTLAPSLGLVLCKDRLYQKPWIIADIPGIIEGAHQNKGLGLDFLRHIER 247 Query: 237 THVLLHI--VSALEENV-QAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 T +LL + VS E N + + ++ EL ++ + KK +V L++ID + D + Sbjct: 248 TLLLLFVIDVSKRERNSPEEDLETLIHELHSHQPDFEKKDMLVALNKIDDLLPD-----E 302 Query: 294 NELATQCGQVPFE------FSSITGHGI 315 E Q Q F S +TG G+ Sbjct: 303 QEECLQSFQKRFPSYTFVLISGLTGEGV 330 >gi|54019994|ref|YP_115558.1| GTPase ObgE [Mycoplasma hyopneumoniae 232] gi|81603679|sp|Q602A7|OBG_MYCH2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|53987167|gb|AAV27368.1| GTP-binding protein [Mycoplasma hyopneumoniae 232] Length = 419 Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 122/284 (42%), Positives = 180/284 (63%), Gaps = 5/284 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D + + +G GG G ISFRRE ++ GGPDGG GG GG ++ S +NTL+ F Sbjct: 1 MRFVDYVSIEVVAGKGGDGIISFRREAHVDKGGPDGGDGGWGGSIYFVGDSGMNTLLPFY 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + +GE G + ++GA G+D+ + VP+GTQVF + SLICD+ E ++ ++A G Sbjct: 61 QTKKIFGYNGENGRPKRQTGANGKDIFIKVPLGTQVFLKK--SLICDIILE-KKYLIAKG 117 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF++S N+AP + G LGQ + L+LK++ADIG++G PNAGKST L+ ++ Sbjct: 118 GRGGLGNFHFRNSKNKAPRISENGELGQNFYLDLQLKVMADIGLVGKPNAGKSTLLSLIS 177 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +KPKIA+Y FTTL P LG+VK F+ AD+PG+I+ A G G+G FLKH ER + Sbjct: 178 NSKPKIANYEFTTLVPQLGVVKIYENSFVTADLPGLIQGASSGKGMGIIFLKHIERCRAI 237 Query: 241 LHIVSALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQID 282 +H++ +N + I EL +N +L +IV ++ D Sbjct: 238 VHVIDFGSDNKNPIKDFIEIKSELEKFNKKLLDLNQIVIANKCD 281 >gi|15618455|ref|NP_224740.1| GTPase ObgE [Chlamydophila pneumoniae CWL029] gi|15836075|ref|NP_300599.1| GTPase ObgE [Chlamydophila pneumoniae J138] gi|33241896|ref|NP_876837.1| GTPase ObgE [Chlamydophila pneumoniae TW-183] gi|161353773|ref|NP_444759.2| GTPase ObgE [Chlamydophila pneumoniae AR39] gi|81859351|sp|Q9Z808|OBG_CHLPN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|4376835|gb|AAD18684.1| GTP binding protein [Chlamydophila pneumoniae CWL029] gi|8978915|dbj|BAA98750.1| GTP binding protein [Chlamydophila pneumoniae J138] gi|33236406|gb|AAP98494.1| GTP binding protein [Chlamydophila pneumoniae TW-183] Length = 335 Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 119/292 (40%), Positives = 189/292 (64%), Gaps = 7/292 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ + +R+G GG G +++R+EK++ GGP GG+GG GG V I+AT+++ + +R Sbjct: 2 FVDQITLELRAGKGGNGVVAWRKEKYLPKGGPYGGNGGNGGSVIIEATTSVYSFEAYRNI 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KA G+ G NR+G G+D++++VP GT + + + ++ D +G+R++++ GG Sbjct: 62 RFLKAPDGQSGATNNRTGRSGKDLIVSVPTGTLLRDAETGEILHDFTVDGERLLVSQGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FK+S N+AP A PG G+ + + L+LKLIADIG++G PNAGKST ++ Sbjct: 122 GGKGNTFFKTSVNRAPTKATPGKPGEIRQVELELKLIADIGLVGFPNAGKSTLFNTLAHT 181 Query: 183 KPKIADYPFTTLYPNLGIV----KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 + K+ YPFTTL P+LG+V + K +I+ADIPGII+ AHQ G+G FL+H ERT Sbjct: 182 EVKVGAYPFTTLAPSLGLVLCKDRLYQKPWIIADIPGIIEGAHQNKGLGLDFLRHIERTL 241 Query: 239 VLLHI--VSALEENV-QAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 +LL + VS E N + + ++ EL ++ + KK +V L++ID + D Sbjct: 242 LLLFVIDVSKRERNSPEEDLETLIHELHSHQPDFEKKDMLVALNKIDDLLPD 293 >gi|222151529|ref|YP_002560685.1| Spo0B-associated GTP-binding protein [Macrococcus caseolyticus JCSC5402] gi|222120654|dbj|BAH17989.1| Spo0B-associated GTP-binding protein [Macrococcus caseolyticus JCSC5402] Length = 429 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 127/322 (39%), Positives = 202/322 (62%), Gaps = 7/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G +++RREK++ GGP GG GG+G + + L TL+DFR+Q Sbjct: 2 FIDQVKINLKAGDGGNGIVAYRREKYVPLGGPAGGDGGKGASIVFEVDEGLRTLLDFRFQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + FKA+ GE G N G +D+VL VP GT + + +I DL QR ++A GG Sbjct: 62 RMFKAEPGENGQSSNMHGRGAKDLVLKVPPGTVIKNAETGEIIADLVTHEQRAVVARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ F S++N AP + G G+E + L+LKL+AD+G++G P+ GKST L+ V++A Sbjct: 122 GGRGNSRFASASNPAPDFCENGEPGEEIEVSLELKLLADVGLVGYPSVGKSTLLSIVSKA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PNLG+V+ + + F++AD+PG+I+ A +G G+G +FLKH ERT V++ Sbjct: 182 KPKIGAYHFTTIKPNLGVVQTKDQRSFVMADLPGLIEGASEGVGLGHQFLKHVERTRVII 241 Query: 242 HIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT-LARKKNELA 297 H++ + + Y I EL YN +L ++ +I+ +++D +++ L K++L Sbjct: 242 HMIDMGRTDGRDPFEDYTTINKELKQYNEKLARRPQIIVANKMDMPNAEEYLQEFKSKLK 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + E S+ T I +L Sbjct: 302 EDVEII--ELSAATYQNIDTLL 321 >gi|71893396|ref|YP_278842.1| GTPase ObgE [Mycoplasma hyopneumoniae J] gi|123646064|sp|Q4AAV4|OBG_MYCHJ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|71851523|gb|AAZ44131.1| GTP-binding protein Obg [Mycoplasma hyopneumoniae J] Length = 419 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 122/284 (42%), Positives = 180/284 (63%), Gaps = 5/284 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D + + +G GG G ISFRRE ++ GGPDGG GG GG ++ S +NTL+ F Sbjct: 1 MRFVDYVSIEVVAGKGGDGIISFRREAHVDKGGPDGGDGGWGGSIYFVGDSGMNTLLPFY 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + +GE G + ++GA G+D+ + VP+GTQVF + SLICD+ E ++ ++A G Sbjct: 61 QTKKIFGYNGENGRPKRQTGANGKDIFIKVPLGTQVFLKK--SLICDIILE-KKYLIAKG 117 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF++S N+AP + G LGQ + L+LK++ADIG++G PNAGKST L+ ++ Sbjct: 118 GRGGLGNFHFRNSKNKAPRISENGELGQNFYLDLQLKVMADIGLVGKPNAGKSTLLSLIS 177 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +KPKIA+Y FTTL P LG+VK F+ AD+PG+I+ A G G+G FLKH ER + Sbjct: 178 NSKPKIANYEFTTLAPQLGVVKIYENSFVTADLPGLIQGASSGKGMGIIFLKHIERCRAI 237 Query: 241 LHIVSALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQID 282 +H++ +N + I EL +N +L +IV ++ D Sbjct: 238 VHVIDFGSDNKNPIKDFIEIKSELEKFNKKLLDLNQIVIANKCD 281 >gi|323359803|ref|YP_004226199.1| GTPase [Microbacterium testaceum StLB037] gi|323276174|dbj|BAJ76319.1| predicted GTPase [Microbacterium testaceum StLB037] Length = 514 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 135/336 (40%), Positives = 204/336 (60%), Gaps = 12/336 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F+D +++R+G GG G +S RREKF GPDGG+GG GGDV + A TL+ + Sbjct: 2 VTFVDRVTLHLRAGKGGNGCVSVRREKFKPLAGPDGGNGGHGGDVVLVADPQTTTLLSYH 61 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + H A +G GM +RSGA GED L VP+GT V + DG L+ D+ G R ++APG Sbjct: 62 HSPHRSAGNGGFGMGDHRSGAMGEDQELPVPLGTVVKDTDGTVLV-DMLTPGMRFVVAPG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA S +AP +A G G E + L+LK +AD+ ++G P+AGKS+ +A+V+ Sbjct: 121 GLGGLGNAALASPKRKAPGFALLGTPGWEGDVVLELKTVADVALVGFPSAGKSSLIAAVS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL+PNLG+V+ G F +AD+PG+I+ A +G G+G FL+H ER L Sbjct: 181 AARPKIADYPFTTLHPNLGVVQAGDVRFTIADVPGLIEGASEGKGLGLEFLRHVERCTAL 240 Query: 241 LHIVSALE----ENVQAAYQCILDELSAY-----NSELRKKIEIVGLSQIDTVDSDTLAR 291 +H++ + + IL EL AY L ++ +I+ L+++D ++ LA Sbjct: 241 VHVLDCATLDPGRDPLSDLDVILAELGAYPVPEGQLPLLERPQIIALNKVDVPEAHELAD 300 Query: 292 -KKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + +L + +V FE S+++ G+ ++ L D + Sbjct: 301 FVRPDLEARGFRV-FEISTVSRAGLRELTFALADIV 335 >gi|307330527|ref|ZP_07609669.1| GTP-binding protein Obg/CgtA [Streptomyces violaceusniger Tu 4113] gi|306883862|gb|EFN14906.1| GTP-binding protein Obg/CgtA [Streptomyces violaceusniger Tu 4113] Length = 477 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 132/321 (41%), Positives = 196/321 (61%), Gaps = 8/321 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G+GG G S REKF GGPDGG+GGRGGDV + ++ TL+D+ + Sbjct: 4 FVDRVELHVAAGNGGHGCASVHREKFKPLGGPDGGNGGRGGDVILVVDQSVTTLLDYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG G D++L VP GT V ++ G +++ DL +G I A GG Sbjct: 64 PHRKATNGKPGEGGNRSGKDGTDLILPVPDGTVVLDKQG-NVLADLIGQGTTYIAAQGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G + L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALASARRKAPGFALLGEPGHAGDVVLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGSTVYTIADVPGLIPGASQGKGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SAL--EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR-KKNELA 297 ++ +AL E + I EL+ Y L + +V L+++D D LA + EL Sbjct: 243 VLDTAALESERDPLTDLDVIEAELAQYGG-LGDRPRVVVLNKVDIPDGQDLADIIRPELE 301 Query: 298 TQCGQVPFEFSSITGHGIPQI 318 + QV E S++ G+ ++ Sbjct: 302 ARGYQV-LEVSAVAHLGLKEL 321 >gi|293977893|ref|YP_003543323.1| GTP-binding protein Obg/CgtA [Candidatus Sulcia muelleri DMIN] gi|292667824|gb|ADE35459.1| GTP-binding protein Obg/CgtA [Candidatus Sulcia muelleri DMIN] Length = 337 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 120/287 (41%), Positives = 193/287 (67%), Gaps = 2/287 (0%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 KF D K+Y +SGDGG+G I FR+EKFI GGPDGG GG+GG++ I+ + L T+ +Y Sbjct: 14 KFTDFIKIYCKSGDGGSGIIHFRKEKFINRGGPDGGDGGKGGNILIRGNNKLFTIYHLKY 73 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 ++H A++G+ G + +G+ G+D ++ VP+GT V + +I L+ ++I+L G Sbjct: 74 KKHIIAENGKNGGRNRITGSNGKDSIIEVPIGTIVKDIYNNIIIEILNNNEEKILLFGGK 133 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 G GN HFK+S + P+Y+ G G+E I L+LK++AD+G+IGLPN+GKST ++ +T Sbjct: 134 GGK-GNCHFKNSLCKTPFYSEKGESGKEFIFVLELKILADVGLIGLPNSGKSTLISMITS 192 Query: 182 AKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +KPKI +YPFTTL N+G++ + +K+ ++ADIPGIIK A +G G+G FLKH +R ++ Sbjct: 193 SKPKIDNYPFTTLNTNIGVLNYKNFKKIVIADIPGIIKGASKGKGLGFEFLKHIQRNKII 252 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 + I+SA + Y I++EL+ ++ + KK ++ +S+ D +D + Sbjct: 253 VFILSAEVIYYKKYYNIIINELNFFDKNILKKKRLLVISKSDLLDQE 299 >gi|161833782|ref|YP_001597978.1| GTP-binding protein [Candidatus Sulcia muelleri GWSS] gi|261277715|sp|A8Z631|OBG_SULMW RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|152206272|gb|ABS30582.1| GTP-binding protein [Candidatus Sulcia muelleri GWSS] Length = 327 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 120/287 (41%), Positives = 193/287 (67%), Gaps = 2/287 (0%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 KF D K+Y +SGDGG+G I FR+EKFI GGPDGG GG+GG++ I+ + L T+ +Y Sbjct: 4 KFTDFIKIYCKSGDGGSGIIHFRKEKFINRGGPDGGDGGKGGNILIRGNNKLFTISHLKY 63 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 ++H A++G+ G + +G+ G+D ++ VP+GT V + +I L+ ++I+L G Sbjct: 64 KKHIIAENGKNGGRNRITGSNGKDSIIEVPIGTIVKDIYNNIIIEILNNNEEKILLFGGK 123 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 G GN HFK+S + P+Y+ G G+E I L+LK++AD+G+IGLPN+GKST ++ +T Sbjct: 124 GGK-GNCHFKNSLCKTPFYSEKGESGKEFIFVLELKILADVGLIGLPNSGKSTLISMITS 182 Query: 182 AKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +KPKI +YPFTTL N+G++ + +K+ ++ADIPGIIK A +G G+G FLKH +R ++ Sbjct: 183 SKPKIDNYPFTTLNTNIGVLNYKNFKKIVIADIPGIIKGASKGKGLGFEFLKHIQRNKII 242 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 + I+SA + Y I++EL+ ++ + KK ++ +S+ D +D + Sbjct: 243 VFILSAEVIYYKKYYNIIINELNFFDKNILKKKRLLVISKSDLLDQE 289 >gi|194246675|ref|YP_002004314.1| GTPase ObgE [Candidatus Phytoplasma mali] gi|261277666|sp|B3QZT1|OBG_PHYMT RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|193807032|emb|CAP18468.1| conserved hypothetical protein, GTP-binding [Candidatus Phytoplasma mali] Length = 421 Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 119/288 (41%), Positives = 185/288 (64%), Gaps = 1/288 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DEA I++G+GG G +SFR+EK++ GGPDGG+GG+GG ++ + N L+ + Sbjct: 1 MYFIDEAINEIKAGNGGNGVVSFRKEKYVPLGGPDGGNGGKGGSIFFIGEQSENNLLKLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ+H KA++GE G +N+ GA E++ + VP+GT ++ + ++ + G+ + +A G Sbjct: 61 YQKHLKAKNGENGKNKNKHGANAENIYIKVPLGTIIYNLQN-EITGEILKHGEILTIAKG 119 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN + N P YA G +G+ I +LK++AD+G+IG P+ GKST ++ ++ Sbjct: 120 GRGGKGNKSLATFKNPVPKYAEKGGIGESFKIKTELKILADVGLIGYPSVGKSTLISIIS 179 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL P LG+V + FI+AD+PG+I NAH G G+G +FLKH ER +L Sbjct: 180 DAKPKIADYPFTTLKPYLGMVYVDNESFIVADLPGLIPNAHLGKGMGIKFLKHIERCRIL 239 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT 288 +H+ + N + + EL YN L KK +I+ +++D + + T Sbjct: 240 IHMCDMSKSNPLQDIENLNQELKIYNKNLLKKPQIIIANKMDIIGAKT 287 >gi|152967398|ref|YP_001363182.1| GTPase ObgE [Kineococcus radiotolerans SRS30216] gi|261266837|sp|A6WDM9|OBG_KINRD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|151361915|gb|ABS04918.1| GTP-binding protein Obg/CgtA [Kineococcus radiotolerans SRS30216] Length = 513 Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 125/338 (36%), Positives = 196/338 (57%), Gaps = 10/338 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+ GDGG G S REKF GGPDGG+GG+GGDV ++ + TL+D + + Sbjct: 5 FVDRVVVHASGGDGGNGCASVHREKFKPLGGPDGGNGGKGGDVILEVDPQVTTLLDLQRR 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H A G GM +R+GA G+D+V+ VP GT V G L+ DL G R + APGG Sbjct: 65 PHRSAPDGRFGMGSHRNGADGDDLVIGVPDGTIVRSASG-ELLADLVGPGTRYVAAPGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G+ + L++K +AD+ ++G P+AGKS+ +A+++ A Sbjct: 124 GGLGNAALASAKRKAPGFALLGEPGEVLDLHLEVKTLADVALVGFPSAGKSSLVAALSAA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G + +AD+PG+I A +G G+G FL+H ER L+H Sbjct: 184 RPKIADYPFTTLVPNLGVVEAGSTRYTVADVPGLIPGASEGRGLGLDFLRHVERCVALVH 243 Query: 243 IVSA----LEENVQAAYQCILDELSAYNSE-----LRKKIEIVGLSQIDTVDSDTLARKK 293 ++ + + + + I EL+AY + L+ + I+ +++ D D+ +A Sbjct: 244 VLDGANLETDRDPVSDLEAIEKELAAYRVDDGAVPLQDRPRIIVINKADVPDARDMAEIV 303 Query: 294 NELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 + G F S++ G+ ++ + + + + R Sbjct: 304 RADLEEQGAPVFVVSAVAHTGLRELSFAMAELVSAARA 341 >gi|227494690|ref|ZP_03925006.1| GTPase ObgE [Actinomyces coleocanis DSM 15436] gi|226831872|gb|EEH64255.1| GTPase ObgE [Actinomyces coleocanis DSM 15436] Length = 529 Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 124/343 (36%), Positives = 203/343 (59%), Gaps = 14/343 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ G GG G S REKF GGPDGG+GG GG+V ++ + TL+++ Sbjct: 23 FVDTVTLHVAGGKGGHGCASIHREKFKPLGGPDGGNGGNGGNVILEVSEQTTTLLNYHRA 82 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA++G G + G G +++L VP GT V + G +++ DL G + I+A GG Sbjct: 83 PHQKAENGVPGSGDHGDGKNGANIILPVPEGTVVKDTKG-NVLADLTGVGTQFIVAEGGR 141 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S +AP +A G G+E+ I L+LK +ADI ++G P+AGKS+ +A+++ A Sbjct: 142 GGLGNAALASKKRKAPGFALLGEPGEERDIVLELKSVADIALVGFPSAGKSSLIAAMSAA 201 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G + + +AD+PG+I+ A QG G+G FL+H ER V++H Sbjct: 202 RPKIADYPFTTLVPNLGVVQAGDERYTIADVPGLIEGASQGRGLGLEFLRHIERCAVIVH 261 Query: 243 IVSAL----EENVQAAYQCILDELSAYNSE---------LRKKIEIVGLSQIDTVDSDTL 289 ++ A E + + + I EL+ Y S+ L ++ ++ ++++D D + Sbjct: 262 VLDAATFEPERDPASDLKIIETELAQYKSDLGELEGYVPLGQRPRVIVINKVDVPDGKEM 321 Query: 290 ARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 A + + G FE S+++ G+ ++ L + + + R + Sbjct: 322 AELQRLELEEYGWPVFEVSAVSREGLKELSFALAEMVAAHRAQ 364 >gi|193216635|ref|YP_001999877.1| GTPase ObgE [Mycoplasma arthritidis 158L3-1] gi|261266883|sp|B3PMC1|OBG_MYCA5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|193001958|gb|ACF07173.1| GTPase protein Obg [Mycoplasma arthritidis 158L3-1] Length = 422 Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 125/272 (45%), Positives = 177/272 (65%), Gaps = 7/272 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE V +++G GG G ISFRRE ++ GGPDGG+GGRGG+V+ + S LNTL+ F Sbjct: 1 MKFIDEVNVLVKAGKGGDGIISFRREANVDRGGPDGGNGGRGGNVYFRGDSGLNTLLAFH 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ A+ GE G +N GA G D ++ VP+GT V+ ED +LI D+ E + ++A G Sbjct: 61 YQNKISAKDGESGKPKNAYGAAGADEIVKVPLGTLVYYED--NLIADV-IEPKDYLIAKG 117 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN FKS+ N AP G G++ + L LK++AD+G++G P+AGKS+ L +++ Sbjct: 118 GRGGRGNLMFKSAKNTAPRICENGESGEKFALRLVLKVLADVGLVGKPSAGKSSLLNALS 177 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AK K ADY FTTL P LG++K K +AD+PG+I A +G G+G +FLKH ER V+ Sbjct: 178 NAKAKTADYDFTTLVPQLGMLKYYDKSCTIADLPGLIAQASEGKGLGFQFLKHIERCKVI 237 Query: 241 LHIV---SALEENVQAAYQCILDELSAYNSEL 269 H++ S+L++ + Y+ I EL YN L Sbjct: 238 AHVIDFGSSLKDPI-LDYETIKKELKDYNLNL 268 >gi|296273882|ref|YP_003656513.1| GTP-binding protein Obg/CgtA [Arcobacter nitrofigilis DSM 7299] gi|296098056|gb|ADG94006.1| GTP-binding protein Obg/CgtA [Arcobacter nitrofigilis DSM 7299] Length = 363 Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 124/282 (43%), Positives = 178/282 (63%), Gaps = 2/282 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K + SG GG G +FRREKF+ GGPDGG GG+GGDV +N +TL ++ + Sbjct: 2 FIDSVKFSVSSGKGGQGCAAFRREKFVVKGGPDGGDGGKGGDVCFVVDNNTDTLSWYKGK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 KA +G+ G+ +G GE +VL VP GTQV +D +I DL +EG + +L GG Sbjct: 62 HKLKADNGKPGLGSRCTGKSGETLVLVVPPGTQVINDDTDEVIADLLEEGDKKLLLEGGK 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+S NQ P Y PG+ G+ + L+LKLIAD+G++G PN GKST +++ + A Sbjct: 122 GGLGNTHFKNSRNQRPTYFQPGLPGETMNLRLELKLIADVGLVGYPNVGKSTLISTTSNA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 P++A+Y FTTL P LG+V+ G + F++ADIPGII A +G G+G FL+H ERT LL Sbjct: 182 TPEVANYEFTTLTPKLGVVELGDFNSFVMADIPGIIDGASEGKGLGLEFLRHIERTKTLL 241 Query: 242 HIVSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 + N + + +EL ++S+L K+ + L++ D Sbjct: 242 FTIDITNYRNTLDQFNVLKEELEKFSSDLSKRNYAIALTKTD 283 >gi|261266895|sp|B3DVG9|OBG_METI4 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 365 Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 135/337 (40%), Positives = 190/337 (56%), Gaps = 26/337 (7%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D ++ ++G GG G ISF RE F GGPDGG GG+GGDV ++ L+ L F + Sbjct: 2 FTDYVRILAKAGKGGNGCISFCREAFRPHGGPDGGDGGKGGDVILEVNPQLSDLSHFLFS 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDG-------------------IS 103 H A+ G+ G + R G G+++ L VP G V++ D + Sbjct: 62 PHQFAEDGQPGKGQKRKGRDGKNLKLEVPPGVVVYQLDPNRIFHSSRDLLPIPKPGEPLK 121 Query: 104 LICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIG 163 I +L + G R IL GG GG GN F+S NQ+P Y G GQ L+LK IAD+G Sbjct: 122 KIGELIEPGMRFILCKGGKGGRGNFQFRSPINQSPRYCEEGEEGQSGQFLLELKTIADVG 181 Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAH 221 +GLPN+GKST L VT AKPK A YPFTTL P++GIV +GY+ ADIPG+I+ AH Sbjct: 182 FVGLPNSGKSTLLRQVTDAKPKTAPYPFTTLKPHVGIVNFDDGYR-MSCADIPGLIEGAH 240 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGL 278 QG G+G FL+H ER+H+L++++ + + VQ Y + +EL YN EL KK ++ Sbjct: 241 QGKGLGFYFLRHIERSHLLVYVLDLADPFLDPVQVFY-TLRNELEKYNKELLKKPFLIVG 299 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 +++D V +D+L K + + G S++ GI Sbjct: 300 NKVDLVAADSLNHKSLDFNKRTGLSFLPISALKAQGI 336 >gi|298708794|emb|CBJ30754.1| PObg2, plastid Obg/CgtA-like GTPase 2 [Ectocarpus siliculosus] Length = 558 Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 129/302 (42%), Positives = 190/302 (62%), Gaps = 14/302 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F DEA+VY+R G GG G SF+ + G P+GGSGG+GGDV + S+LNTL++ R Sbjct: 116 FYDEAQVYVRGGSGGEGAASFKVMAKKQRGQPNGGSGGKGGDVSLVCESSLNTLVNLRGT 175 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEED-GISLICDLDQEGQRIILAPGG 121 F AQ G G +R +G G + + VP GT V + D G ++ +L + G+R+++A GG Sbjct: 176 MSFVAQKGTAGQQRLTNGKDGGSIEVPVPPGTVVKDRDNGGVVLGELREGGERLVVAKGG 235 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA K + QAP + PG G+ + + L+L+L+AD+G++G+P+AGKST LA+ T Sbjct: 236 FGGRGNAATKITRGQAPKASPPGA-GERRWLSLELRLVADVGLVGVPSAGKSTLLAASTN 294 Query: 182 AKPKIADYPFTTLYPNLGIVKE---GY--KEFILADIPGIIKNAHQGAGIGDRFLKHTER 236 AKPKIADYPFTTL PNLG+ G+ K +LADIPG+++ AH+G G+G FL+H ER Sbjct: 295 AKPKIADYPFTTLVPNLGVCDPEALGFKGKGMVLADIPGLLEGAHKGVGLGRAFLRHVER 354 Query: 237 THVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 ++HIVS + ++ I EL+ ++ L +V L++ID + + ++ EL Sbjct: 355 CRAIIHIVSGASPDPVGDFRAINQELALFSEAL----AVVVLNKIDLPEVED---RREEL 407 Query: 297 AT 298 T Sbjct: 408 ET 409 >gi|189219279|ref|YP_001939920.1| GTPase Obg [Methylacidiphilum infernorum V4] gi|189186137|gb|ACD83322.1| GTPase Obg [Methylacidiphilum infernorum V4] Length = 375 Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 135/337 (40%), Positives = 190/337 (56%), Gaps = 26/337 (7%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D ++ ++G GG G ISF RE F GGPDGG GG+GGDV ++ L+ L F + Sbjct: 12 FTDYVRILAKAGKGGNGCISFCREAFRPHGGPDGGDGGKGGDVILEVNPQLSDLSHFLFS 71 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDG-------------------IS 103 H A+ G+ G + R G G+++ L VP G V++ D + Sbjct: 72 PHQFAEDGQPGKGQKRKGRDGKNLKLEVPPGVVVYQLDPNRIFHSSRDLLPIPKPGEPLK 131 Query: 104 LICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIG 163 I +L + G R IL GG GG GN F+S NQ+P Y G GQ L+LK IAD+G Sbjct: 132 KIGELIEPGMRFILCKGGKGGRGNFQFRSPINQSPRYCEEGEEGQSGQFLLELKTIADVG 191 Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAH 221 +GLPN+GKST L VT AKPK A YPFTTL P++GIV +GY+ ADIPG+I+ AH Sbjct: 192 FVGLPNSGKSTLLRQVTDAKPKTAPYPFTTLKPHVGIVNFDDGYR-MSCADIPGLIEGAH 250 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIVGL 278 QG G+G FL+H ER+H+L++++ + + VQ Y + +EL YN EL KK ++ Sbjct: 251 QGKGLGFYFLRHIERSHLLVYVLDLADPFLDPVQVFY-TLRNELEKYNKELLKKPFLIVG 309 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 +++D V +D+L K + + G S++ GI Sbjct: 310 NKVDLVAADSLNHKSLDFNKRTGLSFLPISALKAQGI 346 >gi|288921991|ref|ZP_06416200.1| GTP-binding protein Obg/CgtA [Frankia sp. EUN1f] gi|288346653|gb|EFC80973.1| GTP-binding protein Obg/CgtA [Frankia sp. EUN1f] Length = 550 Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 135/333 (40%), Positives = 197/333 (59%), Gaps = 6/333 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ +GDGG G S REKF GGPDGG+GGRGGDV ++ + TL+DF + Sbjct: 4 FVDRVVLHAAAGDGGHGCCSIHREKFKPLGGPDGGNGGRGGDVVLRVDHGVTTLLDFHFH 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA G G NR GA G D+VL VP GT V DG LI DL G +LA GG Sbjct: 64 PHQKAGGGRPGQGSNRHGADGGDLVLAVPDGTVVISPDGEELI-DLVGPGSSYVLARGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G++ L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGRGNASLASARRKAPGFAELGEPGEQLDAVLELKSVADVALVGFPSAGKSSLVSVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA+YPFTTL PNLG+V+ G + + +AD+PG+I A QG G+G FL+H ER +++ Sbjct: 183 RPKIAEYPFTTLVPNLGVVQAGDHPPYTVADVPGLIPGASQGRGLGLEFLRHIERCSLIV 242 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 H++ + LE + I EL+AY ++L + +V L+++D D+ LA Sbjct: 243 HVLDCATLEPGRDPLTDLDIIEAELAAYTTDLSDRPRLVVLNKVDVPDAADLAELVTPDL 302 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G F S+ + HG+ + L + + S+R Sbjct: 303 QARGLTVFAVSTASRHGVRALSLALAELVASLR 335 >gi|317124520|ref|YP_004098632.1| GTP-binding protein Obg/CgtA [Intrasporangium calvum DSM 43043] gi|315588608|gb|ADU47905.1| GTP-binding protein Obg/CgtA [Intrasporangium calvum DSM 43043] Length = 505 Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 133/346 (38%), Positives = 201/346 (58%), Gaps = 14/346 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F+D A +++ +G GG G S +REKF GGPDGG+GG GG V ++ TL+D+ Sbjct: 3 VNFVDRAVLHLSAGAGGHGVASVKREKFKPLGGPDGGNGGHGGSVILRVDPQATTLLDYH 62 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 H KA +G+ G R+GA G D+VL VP GT V + DG ++ DL G ++A G Sbjct: 63 RHPHRKADNGKPGGGDERNGADGADLVLPVPEGTVVKDGDG-RIVVDLVGMGTEHVIARG 121 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN S+ +AP +A G G+E + L+LK +AD+ +IG P+AGKS+ ++ ++ Sbjct: 122 GRGGLGNKALASARRKAPGFALLGEPGEEVDVVLELKTLADVALIGFPSAGKSSLVSVLS 181 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL PNLG+V G F +AD+PG+I AH+G G+G FL+H ER VL Sbjct: 182 AARPKIADYPFTTLVPNLGVVTAGSTRFTIADVPGLIPGAHEGKGLGLEFLRHVERCSVL 241 Query: 241 LHIV--SALE--ENVQAAYQCILDELSAYNSE-------LRKKIEIVGLSQIDTVDSDTL 289 H+V + LE + + I ELS Y + L ++ ++ L++ D ++ L Sbjct: 242 AHVVDCATLEPGRDPLTDLEVIERELSLYVPDADLGGRPLAERTRLIVLNKADVPEAREL 301 Query: 290 ARK-KNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 A K +L + +V F S++ G+ ++ + + + R E E Sbjct: 302 AEMVKPDLEARGYEV-FIVSAVAHLGLKELTYAMARHVETARAEVE 346 >gi|111221365|ref|YP_712159.1| GTPase ObgE [Frankia alni ACN14a] gi|123143372|sp|Q0RPF6|OBG_FRAAA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|111148897|emb|CAJ60576.1| putative GTP-binding protein [Frankia alni ACN14a] Length = 544 Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 136/334 (40%), Positives = 197/334 (58%), Gaps = 6/334 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ +GDGG G S REKF GGPDGG GGRGGDV + ++ TL+DF + Sbjct: 4 FVDRVVLHAAAGDGGHGCASIHREKFKPLGGPDGGDGGRGGDVRLVVDPSVTTLLDFHFH 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H +A G G NRSGA GED++L VP GT V DG LI DL G +LA GG Sbjct: 64 PHQRASRGRPGQGSNRSGADGEDLILPVPDGTVVLTGDGEQLI-DLVGAGSAFVLARGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G+ L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGRGNAALASARRKAPGFAELGEPGELLDAVLELKTVADVALVGFPSAGKSSLVSVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADYPFTTL PNLG+ + G + + +AD+PG+I A +G G+G FL+H ER +++ Sbjct: 183 KPKIADYPFTTLVPNLGVARAGDHPPYTVADVPGLIPGASEGRGLGLEFLRHIERCSLIV 242 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 H++ + LE + I EL+AY+++L + +V L++ID D+ LA Sbjct: 243 HVLDCATLEPGRDPLTDLDVIEAELAAYSADLSDRPRLVVLNKIDVPDAADLADLVTADL 302 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 G F SS T G+ + L +++ ++R Sbjct: 303 RARGLDVFAVSSATRRGVHALSLALAERVAALRA 336 >gi|329117443|ref|ZP_08246160.1| Obg family GTPase CgtA [Streptococcus parauberis NCFD 2020] gi|326907848|gb|EGE54762.1| Obg family GTPase CgtA [Streptococcus parauberis NCFD 2020] Length = 438 Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 135/329 (41%), Positives = 204/329 (62%), Gaps = 10/329 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ + +G GG G +SFRREK++ GGP GG GG+GG V + L TL+DFRY Sbjct: 4 FLDTAKISVHAGRGGDGMVSFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F+A+ GEKGM + G ED+++ VP GT V + + +I DL + GQ +A GG Sbjct: 64 RKFRAKAGEKGMTKGMHGRGAEDLIVHVPQGTTVKDVETGKVIIDLVEHGQEFKIAQGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST L+ V+ A Sbjct: 124 GGRGNIRFATPRNPAPEIAENGEPGEERELELELKILADVGLVGFPSVGKSTLLSVVSAA 183 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKI Y FTT+ PN+G+V+ + F +AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 KPKIGAYHFTTIVPNIGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV--SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 HI+ SA E + Y+ I +EL YN L ++ +I+ +++D D+ + L K +L Sbjct: 244 HIIDMSASEGRDPYDDYKSINNELETYNLRLMERPQIIVANKMDMPDAEENLEDFKAKLY 303 Query: 298 TQCGQ-----VPFEFSSITGHGIPQILEC 321 + + + + S++ G+ +LE Sbjct: 304 AEYDEFEEKPLIYPISTLAQKGLDNLLEA 332 >gi|313772303|gb|EFS38269.1| Obg family GTPase CgtA [Propionibacterium acnes HL074PA1] Length = 469 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 108/275 (39%), Positives = 164/275 (59%), Gaps = 5/275 (1%) Query: 45 VWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISL 104 V + S + TL+D+ +Q KA +GE G N++GA G D++L VP GT V + D L Sbjct: 12 VIFRVDSPMTTLVDYHWQSTRKATNGESGRGDNQAGANGSDMILAVPEGTVVSDADTGEL 71 Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 + DL G +++A GG GG GNA +S +AP +A G G+E+ I L+LK++ADIG+ Sbjct: 72 LGDLVGVGAELVVAAGGRGGLGNAALANSARKAPGFALLGEAGEERKILLELKVVADIGL 131 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGA 224 +G P+AGKS+ +A+++RAKPKIADYPFTTL PNLG+V G + +AD+PG+I A G Sbjct: 132 VGFPSAGKSSLIAAISRAKPKIADYPFTTLVPNLGVVVAGETTYTVADVPGLIPGASVGK 191 Query: 225 GIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 G+G FL+H ER ++H++ + + I EL A+ L + +V L++ Sbjct: 192 GLGFDFLRHIERCRAIVHVIDCATYEPGRDPVSDLDVIEGELIAHGG-LEDRPRLVVLNK 250 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 +D D+ LA + + G F S+ +G G+ Sbjct: 251 VDVPDAADLADIIFDDVAERGWPVFRVSTKSGEGL 285 >gi|331695832|ref|YP_004332071.1| GTPase obg [Pseudonocardia dioxanivorans CB1190] gi|326950521|gb|AEA24218.1| GTPase obg [Pseudonocardia dioxanivorans CB1190] Length = 523 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 131/338 (38%), Positives = 200/338 (59%), Gaps = 10/338 (2%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ +G GG G S REKF GGPDGG+GGRGG + + ++TL+DF + Sbjct: 3 RFVDRVVLHAIAGAGGNGCASVHREKFKPLGGPDGGNGGRGGSIVLVVDPGVHTLLDFHH 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H KA++G++G R+GA ED+ L VP GT VF+E G +I DL G R + A GG Sbjct: 63 RPHAKARNGKEGQGSFRAGANAEDLELAVPDGTVVFDEQG-EIIADLVGAGTRFVAAQGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S+ +AP +A G G+ + + L+L+ +AD+G++G P+AGKS+ +A++++ Sbjct: 122 RGGLGNAALASAARKAPGFALLGEEGEARDLVLELRSMADVGLVGFPSAGKSSLVAALSQ 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A+PKIADYPFTTL P LG+V G F +AD+PG+I A +G G+G FL+H ER VL+ Sbjct: 182 ARPKIADYPFTTLVPQLGVVSAGESVFTVADVPGLIPGASEGRGLGLDFLRHIERCSVLV 241 Query: 242 HIVSALE--------ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 H+V +V+A Q + A +L + IV L++ID D+ L Sbjct: 242 HVVDCATFEPGRDPVADVRALEQELARYTPALGGDLASRPRIVALNKIDVPDAADLVDIV 301 Query: 294 NE-LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 E L + G F S+ + G+ ++ + +++ R Sbjct: 302 TEDLRAEFGWPIFPISTASRAGLRELTFAMAEQVDGYR 339 >gi|296139198|ref|YP_003646441.1| GTP-binding protein Obg/CgtA [Tsukamurella paurometabola DSM 20162] gi|296027332|gb|ADG78102.1| GTP-binding protein Obg/CgtA [Tsukamurella paurometabola DSM 20162] Length = 486 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 138/345 (40%), Positives = 199/345 (57%), Gaps = 14/345 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D V++ +G+GG G S REKF GGPDGG+GGRGG V ++ ++TL+DF + Sbjct: 3 RFVDRVTVHVTAGNGGHGCASIHREKFKPLGGPDGGNGGRGGSVILEVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H KA +G+ G NR G G+D++L VP GT V + DG ++ DL G R A GG Sbjct: 63 RPHLKATNGKPGEGGNREGKSGQDLILKVPDGTVVLDTDG-KMLADLVGAGTRFDAAQGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G GQ + + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 RGGRGNAALVSKARKAPGFALLGEDGQARDLVLELKSVADVGLVGFPSAGKSSLVSVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A G G+G FL+H ER VL Sbjct: 182 AKPKIADYPFTTLAPNLGVVSAGETTFTVADVPGLIPGASSGRGLGLDFLRHLERCAVLA 241 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNS---------ELRKKIEIVGLSQIDTVDSDT 288 H+V + LE + + + EL+AY EL ++ IV L++ D D++ Sbjct: 242 HVVDCATLEPGRDPVSDVDALEAELAAYQPALAADTGLGELSERPRIVVLNKADVPDAEE 301 Query: 289 LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 LA G F S++ G+ ++ L D + R E Sbjct: 302 LAEMVRPEFEARGWPVFVISAVAHTGLRELTFALADLVQKYREER 346 >gi|328907083|gb|EGG26849.1| Obg family GTPase CgtA [Propionibacterium sp. P08] Length = 458 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 106/273 (38%), Positives = 164/273 (60%), Gaps = 5/273 (1%) Query: 47 IQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLIC 106 ++ + TL+D+ +Q KA +GE G N++GA G D+VL VP GT V + D L+ Sbjct: 3 LRVDPQVTTLVDYHWQSTRKATNGEPGRGDNQAGANGSDIVLGVPEGTIVSDADTGELLG 62 Query: 107 DLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIG 166 DL G +++A GG GG GNA +S +AP +A G G+E+ I L+LK++ADIG++G Sbjct: 63 DLVGAGSELVVAAGGRGGLGNAALANSARKAPGFALLGEAGEERKILLELKVVADIGLVG 122 Query: 167 LPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGI 226 P+AGKS+ +A+++RAKPKIADYPFTTL PNLG+V G + +AD+PG+I A G G+ Sbjct: 123 FPSAGKSSLIAAISRAKPKIADYPFTTLVPNLGVVVAGETTYTVADVPGLIPGASLGKGL 182 Query: 227 GDRFLKHTERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 G FL+H ER ++H++ + + + I EL ++ L + +V L+++D Sbjct: 183 GFDFLRHIERCRAIVHVIDCATYEPDRDPVSDLDVIEGELISHGG-LEDRPRLVVLNKVD 241 Query: 283 TVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 D+ LA + + G F S+ +G G+ Sbjct: 242 VPDAADLADIVFDDVAKRGWPVFRISTKSGEGL 274 >gi|108804360|ref|YP_644297.1| GTPase ObgE [Rubrobacter xylanophilus DSM 9941] gi|123177324|sp|Q1AVU3|OBG_RUBXD RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|108765603|gb|ABG04485.1| Small GTP-binding protein domain [Rubrobacter xylanophilus DSM 9941] Length = 411 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 130/292 (44%), Positives = 195/292 (66%), Gaps = 7/292 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DEA+ +R G GG G +SF REK+ GGPDGG GG GG V ++AT +L TL + Sbjct: 1 MQFIDEARFVVRGGRGGDGAVSFHREKYRPRGGPDGGRGGDGGSVILRATEDLQTLERYS 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ A G G NR+G +G DVVL VPVGT V++E G L+ DL + GQ + A G Sbjct: 61 RRKVISAGRGGHGSGNNRAGERGRDVVLDVPVGTLVYDESG--LLADLAEPGQTFVAARG 118 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F +S QAP + G+ G+E+ I L+L++++D+G++GLPNAGKS+ L +++ Sbjct: 119 GEGGRGNASFATSRRQAPAFRELGLPGEEREIRLELRVLSDVGLVGLPNAGKSSLLRALS 178 Query: 181 RAKPKIADYPFTTLYPNLGIVKE-GY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 A+P++ DYPFTTL P LG+V+E GY + F++ADIPG+I A +G G+G+RFL+H R Sbjct: 179 AARPRVGDYPFTTLTPQLGVVEERGYARPFVVADIPGLISGASEGRGLGNRFLRHVARAR 238 Query: 239 VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLA 290 +L+ ++ A E+ + A + + EL A L + +V L+++D +D++ A Sbjct: 239 LLVLVLDA-SEDPEGAERTLRAELGAAG--LSGRPSLVVLNKVDLLDAELRA 287 >gi|291459217|ref|ZP_06598607.1| Obg family GTPase CgtA [Oribacterium sp. oral taxon 078 str. F0262] gi|291418471|gb|EFE92190.1| Obg family GTPase CgtA [Oribacterium sp. oral taxon 078 str. F0262] Length = 463 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 128/325 (39%), Positives = 202/325 (62%), Gaps = 6/325 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK++++SG GG G +SFRRE ++ GGPDGG GG+GGD+ + S LNTL DFR++ Sbjct: 23 FADTAKIFVKSGKGGDGHVSFRRELYVPAGGPDGGDGGKGGDIIFEVDSGLNTLEDFRHK 82 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + + A+ G +G + G G D+V+ VP GT + E++ +I D+ E +R++L GG Sbjct: 83 RKYTAEPGREGGGKRMHGRSGRDLVIRVPEGTILREDESGKIIADMSGENRRLLLLRGGK 142 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + QAP YA PG +E + L+L++IAD+G++G PNAGKS+ L+ + A Sbjct: 143 GGLGNMHFATPAMQAPKYAQPGQDSRELWLRLELRVIADVGLLGFPNAGKSSLLSMCSNA 202 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IA+Y FTTL P LG+V G + F++ADIPG+I+ A +G G+G +FL+H ER VL+ Sbjct: 203 RPEIANYHFTTLTPQLGVVGLRGDRSFVMADIPGLIEGASEGVGLGYQFLRHIERCRVLI 262 Query: 242 HIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V + A + + EL +Y+ L K+ ++ +++D + ++ + + L Sbjct: 263 HVVDLAGTEGRDPAADIETLRRELRSYDEHLLKRPMLIAANKVDLLSAEEERERLDILRE 322 Query: 299 QCGQVP--FEFSSITGHGIPQILEC 321 + G S+ GI ++LE Sbjct: 323 KYGDRMEVLPISAAANTGIGELLEA 347 >gi|330469628|ref|YP_004407371.1| GTPase CgtA [Verrucosispora maris AB-18-032] gi|328812599|gb|AEB46771.1| GTPase CgtA [Verrucosispora maris AB-18-032] Length = 494 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 134/333 (40%), Positives = 197/333 (59%), Gaps = 6/333 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++++GDGG G +S REKF FGGPDGG+GG GG V + ++TL+DF ++ Sbjct: 4 FVDRVVLHLQAGDGGHGCVSIHREKFKPFGGPDGGNGGHGGSVSLVVDPQVHTLLDFHFR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KAQ+G G NR GA G D+VLTVP GT V DG +++ D+ G +A GG Sbjct: 64 PHIKAQNGRGGAGSNRDGANGADLVLTVPDGTVVQTMDG-TVLADMVGAGTTFEVARGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA ++ +AP +A G G+ + L+LK +AD+G++G P+AGKS+ ++ ++ A Sbjct: 123 GGRGNASLANARRKAPGFAELGEPGEHLDVVLELKSVADVGLVGFPSAGKSSLISVISAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V+ F +AD+PG+I A G G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVRVDNHTFTVADVPGLIPGAATGKGLGLEFLRHIERCAVLVH 242 Query: 243 IV--SALE--ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + LE + A I EL+ Y L + +V L++ID D LA Sbjct: 243 VIDTATLEPGRDPLADIDTIEAELAEYGG-LADRPRLVALNKIDVPDGRDLADIVRPDLE 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 G +E S+ T G+ ++ + + + R Sbjct: 302 ARGLRVYEVSAATREGLKELTYAMAELVEQSRA 334 >gi|219114306|ref|XP_002176324.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217402727|gb|EEC42716.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 548 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 121/283 (42%), Positives = 182/283 (64%), Gaps = 1/283 (0%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 KF D A++++++GDGG G ++FRREK GGP+GG GGRGG +++ A LNTL+ R Sbjct: 36 KFFDTARIHVQAGDGGTGCVAFRREKGEARGGPNGGRGGRGGSLYLIADPGLNTLMPLRQ 95 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H KA+ G G +NR G +++ + VP GT V + + +L + GQ++++A GG Sbjct: 96 KVHVKARQGRNGQGKNRDGTSADNIYIRVPPGTVVRDLKTQKVAGELREAGQKLLVAKGG 155 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA F ++ AP A G G + + ++L+L+AD+G +G+PNAGKST LA+ + Sbjct: 156 RGGRGNAAFMTARRTAPKLAERGEPGSARWLSVELRLLADVGFLGMPNAGKSTLLAAASA 215 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIA+YPFTT+ PNLG+ G +L DIPG+I+ A +GAG+G FL+H +R VL Sbjct: 216 ARPKIANYPFTTIVPNLGVCDLGQGAGLVLCDIPGLIEGASEGAGMGGAFLRHVQRCRVL 275 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT 283 LH+V E+ + I EL Y+ L +K ++V L++ID Sbjct: 276 LHVVDGTSEDPIRDFNIINKELQQYDEFLAQKPQVVVLNKIDV 318 >gi|289427284|ref|ZP_06429000.1| Obg family GTPase CgtA [Propionibacterium acnes J165] gi|289159753|gb|EFD07941.1| Obg family GTPase CgtA [Propionibacterium acnes J165] gi|332675243|gb|AEE72059.1| GTPase Obg [Propionibacterium acnes 266] Length = 456 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 106/273 (38%), Positives = 163/273 (59%), Gaps = 5/273 (1%) Query: 47 IQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLIC 106 ++ + TL+D+ +Q KA +GE G N++GA G D++L VP GT V + D L+ Sbjct: 1 MRVDPQVTTLVDYHWQSTRKATNGESGRGDNQAGANGSDMILAVPEGTVVSDADTGELLG 60 Query: 107 DLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIG 166 DL G +++A GG GG GNA +S +AP +A G G+E+ I L+LK++ADIG++G Sbjct: 61 DLVGVGAELVVAAGGRGGLGNAALANSARKAPGFALLGEAGEERKILLELKVVADIGLVG 120 Query: 167 LPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGI 226 P+AGKS+ +A+++RAKPKIADYPFTTL PNLG+V G + +AD+PG+I A G G+ Sbjct: 121 FPSAGKSSLIAAISRAKPKIADYPFTTLVPNLGVVVAGETTYTVADVPGLIPGASVGKGL 180 Query: 227 GDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 G FL+H ER ++H++ + + I EL A+ L + +V L+++D Sbjct: 181 GFDFLRHIERCRAIVHVIDCATYEPGRDPVSDLDVIEGELIAHGG-LEDRPRLVVLNKVD 239 Query: 283 TVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 D+ LA + + G F S+ +G G+ Sbjct: 240 VPDAADLADIIFDDVAERGWPVFRVSTKSGEGL 272 >gi|325963633|ref|YP_004241539.1| GTP-binding protein Obg/CgtA [Arthrobacter phenanthrenivorans Sphe3] gi|323469720|gb|ADX73405.1| GTP-binding protein Obg/CgtA [Arthrobacter phenanthrenivorans Sphe3] Length = 529 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 132/336 (39%), Positives = 194/336 (57%), Gaps = 25/336 (7%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ G GG G +S REKF GGPDGG+GG GGDV ++ TL+D+ + Sbjct: 4 FVDRVVLHVSGGTGGHGCVSVHREKFKPLGGPDGGNGGNGGDVILRVDHQTTTLLDYHHA 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H A +G GM R G GE ++L VP GT V +DG +++ DL EG + A GG Sbjct: 64 PHRHATNGGPGMGDWRGGKNGETLILPVPDGTVVKSKDG-TVLADLVGEGAEYVAAHGGI 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S +AP +A GI G+ I L+LK IADI ++G P+AGKS+ +A+++ A Sbjct: 123 GGLGNAALSSQKRRAPGFALLGIEGEASDIVLELKSIADIALVGFPSAGKSSLIAAMSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G F +AD+PG+I+ A +G G+G FL+H ER L+H Sbjct: 183 RPKIADYPFTTLVPNLGVVQAGDVRFTIADVPGLIEGASEGKGLGHHFLRHVERCAALVH 242 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRK-------------------KIEIVGLSQIDT 283 + L+ A + L +L+ +EL K + +V L+++D Sbjct: 243 V---LDCGTLEADRDPLSDLAVIEAELEKYAVDMSYAGQDGEVVPLNHRPRLVALNKVDL 299 Query: 284 VDSDTLAR-KKNELATQCGQVPFEFSSITGHGIPQI 318 D +A + EL ++ +V FE S+ + G+ Q+ Sbjct: 300 PDGKDMAEFVRPELESRGYRV-FEISATSHEGLRQL 334 >gi|258614983|ref|ZP_05712753.1| GTPase ObgE [Enterococcus faecium DO] Length = 260 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 117/243 (48%), Positives = 163/243 (67%), Gaps = 1/243 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD+ + +++G GG G ++FRREK++ GGP GG GGRGGDV + L TL+DFR+ Sbjct: 4 FLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVILIVDEGLRTLMDFRFN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +HFKAQ GE GM + G ED + VP GT V + + +L+ DL + GQ +++A GG Sbjct: 64 RHFKAQPGENGMSKGMHGRGSEDTYVKVPQGTTVRDAETGALLGDLIENGQTLVVAKGGR 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A Sbjct: 124 GGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSA 183 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI Y FTTL PNLG+V + F AD+PG+I+ A QG G+G +FL+H ERT V+L Sbjct: 184 RPKIGAYHFTTLVPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGTQFLRHIERTRVIL 243 Query: 242 HIV 244 H++ Sbjct: 244 HVI 246 >gi|126642534|ref|YP_001085518.1| putative GTP-binding protein (Obg) [Acinetobacter baumannii ATCC 17978] Length = 321 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 103/248 (41%), Positives = 162/248 (65%), Gaps = 8/248 (3%) Query: 86 VVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGI 145 +VL VPVGT + + D +I DL ++GQR+++A GG GG GN HFKSSTN+AP G Sbjct: 1 MVLKVPVGTTIVDTDSGDIIGDLVEDGQRVMVASGGEGGLGNTHFKSSTNRAPRKCTTGT 60 Query: 146 LGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-KEG 204 G+ + I L+LK++AD+G++G+PNAGKSTF+ +V+ AKPK+ADYPFTT+ PNLG+V + Sbjct: 61 KGEFREIRLELKVLADVGLLGMPNAGKSTFIRAVSAAKPKVADYPFTTMVPNLGVVDADR 120 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE---ENVQAAYQCILDE 261 ++ F++ADIPG+I+ A +GAG+G RFLKH RT +LLHI+ + + I++E Sbjct: 121 HRSFVMADIPGLIEGAAEGAGLGIRFLKHLARTRILLHIIDVQPIDGSDPAHNAKAIMNE 180 Query: 262 LSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ---CGQVPFEFSSITGHGIPQI 318 L+ ++ L K ++ L+++D + ++ + + G V F+ S + G ++ Sbjct: 181 LAKFSPTLAKLPIVLVLNKLDQIAEESREEWCQHILDELQWTGPV-FKTSGLLEEGTKEV 239 Query: 319 LECLHDKI 326 + L D+I Sbjct: 240 VYYLMDQI 247 >gi|325110050|ref|YP_004271118.1| GTPase obg [Planctomyces brasiliensis DSM 5305] gi|324970318|gb|ADY61096.1| GTPase obg [Planctomyces brasiliensis DSM 5305] Length = 333 Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 132/318 (41%), Positives = 198/318 (62%), Gaps = 9/318 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ + ++G+GG G +SFRRE + GGPDGG GG GG + + A +LN+L Sbjct: 2 FVDKITLICKAGEGGRGCLSFRREAHVPRGGPDGGDGGDGGSIIVVANEHLNSLGHLAGH 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H+ A+ G G G G D + VP GT + + + ++ DL + G +++ A GG Sbjct: 62 IHWNAERGRHGEGDLCRGKSGVDSFIEVPPGTIIRDAEHGHILKDLSEPGDQVVAARGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++TN+AP G G+E+ I L+LK+IAD+G+IG PNAGKST L+ ++RA Sbjct: 122 GGRGNKRFATATNRAPKEFEMGQPGEERRIALELKVIADVGLIGKPNAGKSTLLSRLSRA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 P+IA+YPFTT +PNLG+V+ G+ +F+LADIPG+I+ AH G G+G FLKH ERT VL+ Sbjct: 182 TPEIANYPFTTKHPNLGVVQIGWDHDFVLADIPGLIEGAHAGVGLGHEFLKHVERTRVLV 241 Query: 242 HIV--SALEE-NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 H+V S +++ + Y I +EL Y+ EL + E++ +++ + D+D A EL Sbjct: 242 HLVEPSPMDQTDPIDNYFLIREELRQYDMELDGRPEVLVVTKSELTDADATA----ELLE 297 Query: 299 QCGQVPF-EFSSITGHGI 315 + + P SS TG G+ Sbjct: 298 EATKKPVHRISSATGAGL 315 >gi|28493438|ref|NP_787599.1| GTPase ObgE [Tropheryma whipplei str. Twist] gi|81839329|sp|Q83MU8|OBG_TROWT RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|28476479|gb|AAO44568.1| GTP-binding protein [Tropheryma whipplei str. Twist] Length = 445 Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 123/327 (37%), Positives = 200/327 (61%), Gaps = 13/327 (3%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D V +G GG G S RREK+ GPDGGSGG GG ++++A ++ TLI FR Sbjct: 8 EFVDCVTVEFSAGRGGNGCASVRREKYKPLAGPDGGSGGHGGSIFLKADTSERTLISFRR 67 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H+ A +G G+ R R+GA+G+D+ ++VP GT V++E G I DL G + + GG Sbjct: 68 KGHYSASNGAHGLSRLRNGARGKDLEVSVPCGTSVYDEGG-RQIADLVSPGSCLQVVRGG 126 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA + P +A G+ GQ++ + L++K IAD+ ++G P+ GKS+ +++++ Sbjct: 127 TGGLGNAALAGYRRKTPRFALLGLPGQKRKLRLEVKSIADVALVGFPSVGKSSIISAISS 186 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL+PNLG+V+ G + +AD+PG+++ A +G G+G FL+H ER V++ Sbjct: 187 AKPKIADYPFTTLHPNLGVVQSGPYRYTVADVPGLVEGASKGIGLGLNFLRHIERCSVVV 246 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNS-----ELRKKIEIVGLSQIDTVDS----DTLA 290 H++ +++ + + I ELS Y L K+ +++ L++ID + + DTL Sbjct: 247 HVIDCANTQQDPISGFNLIEKELSEYKVAENAIPLNKRPKVIVLNKIDVLQTKEEQDTLL 306 Query: 291 RKKNELATQCGQVPFEFSSITGHGIPQ 317 ++ V + S++T G+ Q Sbjct: 307 YLQSVFKKLVTDV-YAISAVTRSGLRQ 332 >gi|325971802|ref|YP_004247993.1| GTPase obg [Spirochaeta sp. Buddy] gi|324027040|gb|ADY13799.1| GTPase obg [Spirochaeta sp. Buddy] Length = 360 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 121/280 (43%), Positives = 175/280 (62%), Gaps = 1/280 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F DE + + SG+GG G +SFRREK+I GGPDGG GGRGGDV NL TL + Sbjct: 4 FSDETYLDVASGNGGNGCVSFRREKYIPKGGPDGGDGGRGGDVVFVVRQNLRTLAHLKLV 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + ++A++G+ G G G D+ + VP GT + D +I DL + R + GG Sbjct: 64 RTYRAENGKNGSGERCYGRDGVDIEIPVPPGTVIKNADTGEVIKDL-TDVDRWVFLKGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF+++T QAP +A PG G+E I ++L +IADIG +G PNAGKS+ L +T A Sbjct: 123 GGQGNYHFRTATRQAPRFAQPGEKGEEMRIGVELLIIADIGFVGFPNAGKSSLLNMLTNA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 + K+A YPFTT P LG+++ G + +LADIPG+I+ A +GAG+G +FL+H RT L Sbjct: 183 RSKVAGYPFTTKIPQLGMMRYGDHDIVLADIPGLIEGASEGAGMGIKFLRHISRTTGLAF 242 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 +V ++ AY + +EL+A+ EL KK +++ ++ D Sbjct: 243 LVDLSDDRYLEAYDILCNELAAFEPELLKKQQVIIGTKTD 282 >gi|15639729|ref|NP_219179.1| GTPase ObgE [Treponema pallidum subsp. pallidum str. Nichols] gi|189025967|ref|YP_001933739.1| GTPase ObgE [Treponema pallidum subsp. pallidum SS14] gi|81344885|sp|O83724|OBG_TREPA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277729|sp|B2S3Y1|OBG_TREPS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|3323049|gb|AAC65711.1| GTP-binding protein (obg) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018542|gb|ACD71160.1| GTP-binding protein [Treponema pallidum subsp. pallidum SS14] gi|291060104|gb|ADD72839.1| Obg family GTPase CgtA [Treponema pallidum subsp. pallidum str. Chicago] Length = 376 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 113/282 (40%), Positives = 172/282 (60%), Gaps = 2/282 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE + + SG GG G ++FRREK++ GGP GG GGRGGDV Q N+ TL+ RY Sbjct: 4 FVDEVLIRVSSGRGGNGCVAFRREKYVPRGGPAGGDGGRGGDVVFQVRRNMRTLVHLRYG 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQ-RIILAPGG 121 + F+A++G+ G R GAKG D V+ +P G + + ++ D + + L GG Sbjct: 64 RVFRAKNGQDGEGARRFGAKGHDCVIPLPPGCLLRDAQTHEVLHDFGHAHEGCVTLLSGG 123 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG+GN HF+ QAP A+ G GQE+++ ++L+++AD+G +GLPNAGKS+ L T Sbjct: 124 RGGWGNYHFRGPVQQAPQRAHSGQPGQERVVHVELRIVADVGFVGLPNAGKSSLLNFFTH 183 Query: 182 AKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+ ++A YPFTT P LG+++ G ++ ILAD+PGI++ A QG G+G RFLKH R L Sbjct: 184 ARSRVAPYPFTTRIPYLGVLRTGDGRDVILADVPGILERASQGVGLGLRFLKHLTRCAGL 243 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 ++ +E Y + EL A++ K ++ +++D Sbjct: 244 AFLIDLADERALHTYDLLCKELYAFSPVFETKARVLVGTKLD 285 >gi|28572450|ref|NP_789230.1| GTPase ObgE [Tropheryma whipplei TW08/27] gi|81839346|sp|Q83NP1|OBG_TROW8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|28410582|emb|CAD66968.1| GTP-binding protein [Tropheryma whipplei TW08/27] Length = 445 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 123/327 (37%), Positives = 200/327 (61%), Gaps = 13/327 (3%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D V +G GG G S RREK+ GPDGGSGG GG ++++A ++ TLI FR Sbjct: 8 EFVDCVTVEFSAGRGGDGCASVRREKYKPLAGPDGGSGGHGGSIFLKADTSERTLISFRR 67 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H+ A +G G+ R R+GA+G+D+ ++VP GT V++E G I DL G + + GG Sbjct: 68 KGHYSASNGAHGLSRLRNGARGKDLEVSVPCGTSVYDEGG-RQIADLVSPGSCLQVVRGG 126 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA + P +A G+ GQ++ + L++K IAD+ ++G P+ GKS+ +++++ Sbjct: 127 TGGLGNAALAGYRRKTPRFALLGLPGQKRKLRLEVKSIADVALVGFPSVGKSSIISAISS 186 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL+PNLG+V+ G + +AD+PG+++ A +G G+G FL+H ER V++ Sbjct: 187 AKPKIADYPFTTLHPNLGVVQSGPYRYTVADVPGLVEGASKGIGLGLNFLRHIERCSVVV 246 Query: 242 HIVSA--LEENVQAAYQCILDELSAYNS-----ELRKKIEIVGLSQIDTV----DSDTLA 290 H++ +++ + + I ELS Y L K+ +++ L++ID + + DTL Sbjct: 247 HVIDCANTQQDPISGFNLIEKELSEYKVAENAIPLNKRPKVIVLNKIDVLQTKEEQDTLL 306 Query: 291 RKKNELATQCGQVPFEFSSITGHGIPQ 317 ++ V + S++T G+ Q Sbjct: 307 YLQSVFKKLVTDV-YAISAVTRSGLRQ 332 >gi|54023322|ref|YP_117564.1| GTPase ObgE [Nocardia farcinica IFM 10152] gi|81602942|sp|Q5Z041|OBG_NOCFA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|54014830|dbj|BAD56200.1| putative GTP-binding protein [Nocardia farcinica IFM 10152] Length = 485 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 139/342 (40%), Positives = 200/342 (58%), Gaps = 14/342 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 KF+D +++R+G GG G S REKF GGPDGG+GG GGDV ++ N++TL+DF + Sbjct: 3 KFIDRVVLHVRAGKGGHGCASVHREKFKPLGGPDGGNGGNGGDVVLEVDPNVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H KA +G+ G NR G G D++L VP GT V + DG ++ DL G R + A GG Sbjct: 63 HPHAKAGNGKPGEGGNRDGKMGSDLLLKVPDGTVVLDRDG-EVLVDLVGAGNRFVAARGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+E+ + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 RGGLGNAALASKARKAPGFALLGEDGEERDLVLELKSVADVGLVGFPSAGKSSLVSVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A QG G+G FL+H ER VL Sbjct: 182 AKPKIADYPFTTLVPNLGVVASGDTTFTIADVPGLIPGASQGRGLGLDFLRHLERCAVLA 241 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNS---------ELRKKIEIVGLSQIDTVDSDT 288 H+V + LE + + + EL+AY +L + +V L++ D D+ Sbjct: 242 HVVDCATLEPGRDPISDVDALEAELAAYKPALAADAGLGDLADRPRVVILNKTDVPDAAE 301 Query: 289 LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 LA T G F+ S+++ G+ + L D + R Sbjct: 302 LAEMVTPEFTARGWPVFQISAVSRAGLRPLTFALADLVREYR 343 >gi|312195827|ref|YP_004015888.1| GTP-binding protein Obg/CgtA [Frankia sp. EuI1c] gi|311227163|gb|ADP80018.1| GTP-binding protein Obg/CgtA [Frankia sp. EuI1c] Length = 585 Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 133/321 (41%), Positives = 188/321 (58%), Gaps = 6/321 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ +GDGG G S REKF GGPDGG+GGRGGD+ + + TL+DF + Sbjct: 4 FVDRVVLHAAAGDGGHGCASIHREKFKPLGGPDGGNGGRGGDIRLVVDPGVTTLLDFHFH 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H +A G G N+SGA GED+VL VP GT V DG +I DL G +LA GG Sbjct: 64 PHRRATSGRPGQGSNKSGADGEDMVLPVPDGTVVLTPDGDEII-DLVGLGSTFVLAQGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA SS +AP +A G G+ L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGRGNAALASSRRKAPGFAELGEPGESLDAVLELKSVADVALVGYPSAGKSSLVSVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA+YPFTTL PNLG+ + G + +AD+PG+I A QG G+G FL+H ER V++ Sbjct: 183 KPKIAEYPFTTLVPNLGVAQAGDLPPYTVADVPGLIPGASQGRGLGLEFLRHIERCSVIV 242 Query: 242 HIVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 H++ + + I EL+AY+++L + +V L++ID D+ LA Sbjct: 243 HVLDCATLDPGRDPLSDLDTIEHELAAYSADLAGRPRLVVLNKIDVPDARELAEMVTADL 302 Query: 298 TQCGQVPFEFSSITGHGIPQI 318 G F SS T G+ Q+ Sbjct: 303 RSRGLEVFSISSATREGVRQL 323 >gi|329947023|ref|ZP_08294435.1| Obg family GTPase CgtA [Actinomyces sp. oral taxon 170 str. F0386] gi|328526834|gb|EGF53847.1| Obg family GTPase CgtA [Actinomyces sp. oral taxon 170 str. F0386] Length = 535 Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 127/307 (41%), Positives = 181/307 (58%), Gaps = 20/307 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ GDGG G S REKF GPDGG GG GGDV + S + TL+ + Sbjct: 4 FIDRVVLHVAGGDGGNGCTSVHREKFKPLAGPDGGDGGHGGDVVLAVDSRVTTLLSYHRS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H +A +G GM R G G+D+VL VP GT V ++ G +I DL EG I++A GG Sbjct: 64 PHQRAGNGTPGMGDWRRGTDGKDLVLPVPEGT-VVKDVGGQVIADLVGEGASIVVAEGGT 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN SS +AP + G GQ + + L+LK IAD+ ++G P+AGKS+ +A+++ A Sbjct: 123 GGRGNFSLASSKRKAPGFHLLGEPGQARDVTLELKTIADVALVGYPSAGKSSLIAAMSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G + +AD+PG+I A QG G+G FL+H ER V++H Sbjct: 183 RPKIADYPFTTLVPNLGVVEAGEVRYTIADVPGLIPGASQGKGLGLDFLRHIERCAVIVH 242 Query: 243 IV--SALE--ENVQAAYQCILDELSAYNSE---------------LRKKIEIVGLSQIDT 283 ++ + LE + + I ELSAY+ L ++ IV L+++D Sbjct: 243 VLDCATLEPGRDPLSDLDTIEAELSAYSERLGEQEDDPALTGRVPLMERPRIVVLNKVDV 302 Query: 284 VDSDTLA 290 D+ LA Sbjct: 303 PDAAELA 309 >gi|227495881|ref|ZP_03926192.1| GTPase ObgE [Actinomyces urogenitalis DSM 15434] gi|226834558|gb|EEH66941.1| GTPase ObgE [Actinomyces urogenitalis DSM 15434] Length = 521 Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 129/349 (36%), Positives = 193/349 (55%), Gaps = 20/349 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 F+D +++ GDGG G S REKF GPDGG GG GGDV + A ++ TL+ + Sbjct: 3 SFIDRVVLHVAGGDGGNGCTSIHREKFKPLAGPDGGDGGHGGDVILVADPDVTTLLSYHR 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H A+ G GM R G GED+VL VP GT V +G ++ DL + G R+++A GG Sbjct: 63 SPHRSAKGGTPGMGNWRRGVDGEDLVLPVPTGTVVKTSEG-EVLADLVEAGNRVVVAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN SS +AP + G G + L+LK IAD+ ++G P+AGKS+ +A+++ Sbjct: 122 TGGRGNFSLASSKRRAPGFHLLGEPGDRLDVVLELKTIADVALVGYPSAGKSSLIAAMSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A+PKIADYPFTTL PNLG+V+ G + +AD+PG+I A QG G+G FL+H ER V++ Sbjct: 182 ARPKIADYPFTTLVPNLGVVEAGATRYTIADVPGLIPGASQGKGLGLDFLRHIERCAVIV 241 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNS---------------ELRKKIEIVGLSQID 282 H++ + LE + + I EL+AY L ++ +V L+++D Sbjct: 242 HVLDCATLEPGRDPLSDLDTIESELAAYADGLGEAESDPSLTGRVPLMERPRVVVLNKVD 301 Query: 283 TVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 +++ LA E G F S++ G+ + L + + + R Sbjct: 302 VPEAEELADFVREDIEDRGLRVFTVSAVAHTGLRPLSFALAELVEAARA 350 >gi|257068979|ref|YP_003155234.1| GTPase ObgE [Brachybacterium faecium DSM 4810] gi|256559797|gb|ACU85644.1| GTP-binding protein Obg/CgtA [Brachybacterium faecium DSM 4810] Length = 509 Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 127/325 (39%), Positives = 197/325 (60%), Gaps = 19/325 (5%) Query: 23 FRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAK 82 RREKF GPDG GGRGGDV ++ ++ TL+ + ++ H +A G G R GA+ Sbjct: 24 IRREKFKPLAGPDGADGGRGGDVILEVDASTTTLLAYHHRPHQRATGGGFGKGDLRHGAR 83 Query: 83 GEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYAN 142 GED+VL VP GT V DG +++ DL G R + A GG+GG GNA ++ +AP +A Sbjct: 84 GEDLVLPVPDGTVVTGADG-TVLADLVGIGTRFVAARGGSGGLGNAALANAKRKAPGFAL 142 Query: 143 PGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK 202 G G+E+ + L+LK +AD+ ++G P+AGKS+ +A+++ A+PKIADYPFTTL PNLG+V+ Sbjct: 143 LGEPGEERTLVLELKTVADVALVGYPSAGKSSLIAAMSAARPKIADYPFTTLVPNLGVVE 202 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SALE------------ 248 G + +AD+PG+I A QG G+G FL+H ER HVL+H++ ++LE Sbjct: 203 AGQHRYTIADVPGLIPGASQGKGLGLDFLRHIERCHVLVHVLDTASLESDRDPAGDLATI 262 Query: 249 ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK-KNELATQCGQVPF-E 306 E+ A+Y LDE + L ++ ++ L++ D D +A +++LA + QVP + Sbjct: 263 EHELASYAASLDEETEGRVPLMERPTVIVLNKTDLPDGADMADMIRDQLAER--QVPIVD 320 Query: 307 FSSITGHGIPQILECLHDKIFSIRG 331 S+++ G+ ++ L D + R Sbjct: 321 VSAVSHKGLRELSFVLGDLVEQARA 345 >gi|159039388|ref|YP_001538641.1| GTPase ObgE [Salinispora arenicola CNS-205] gi|261263064|sp|A8M0Y9|OBG_SALAI RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|157918223|gb|ABV99650.1| GTP-binding protein Obg/CgtA [Salinispora arenicola CNS-205] Length = 481 Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 136/322 (42%), Positives = 198/322 (61%), Gaps = 8/322 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++++GDGG G +S REKF FGGPDGG+GG GG V + ++TL+DF ++ Sbjct: 4 FVDRVVLHLQAGDGGHGCVSIHREKFKPFGGPDGGNGGHGGSVSLVVDPQVHTLLDFHFR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NR GA G D+VL VP GT V + G +++ DL G +A GG Sbjct: 64 PHVKASNGKGGAGSNRDGANGADLVLRVPNGT-VVQTTGGTVLADLVGAGTTFEVARGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA ++ +AP +A G G + L+LK +ADIG++G P+AGKS+ ++ ++ A Sbjct: 123 GGRGNAALANARRKAPGFAELGEPGDKLDAVLELKSVADIGLVGYPSAGKSSLISVISAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V+ F +AD+PG+I A G G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVRVDNHTFTVADVPGLIPGAATGKGLGLEFLRHVERCAVLVH 242 Query: 243 IV-SALEENVQ---AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR-KKNELA 297 +V +A E + A I EL+AY L + +V L++ID D LA + +L Sbjct: 243 VVDTATLETARDPVADIDAIEAELTAYGG-LADRPRLVALNKIDVPDGRDLAEIVRPDLE 301 Query: 298 TQCGQVPFEFSSITGHGIPQIL 319 + +V FE S+ T G+ +++ Sbjct: 302 ARGFRV-FEVSAATREGLKELM 322 >gi|256375327|ref|YP_003098987.1| GTPase ObgE [Actinosynnema mirum DSM 43827] gi|255919630|gb|ACU35141.1| GTP-binding protein Obg/CgtA [Actinosynnema mirum DSM 43827] Length = 488 Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 136/325 (41%), Positives = 195/325 (60%), Gaps = 9/325 (2%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ +GDGG G S REKF GGPDGG+GG+GGDV + S ++TL+DF + Sbjct: 3 RFVDRVVIHAAAGDGGHGCASVHREKFKPLGGPDGGNGGKGGDVVLVVDSQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H A G+ G NR GA G D+ L VP GT V EDG ++ DL EG R+I A GG Sbjct: 63 RPHASAGSGKAGAGANRDGANGVDLELRVPDGTVVMTEDG-EVVADLVGEGTRLIAARGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+ + + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 RGGLGNASLASKARKAPGFALLGEPGESQDLVLELKSVADVGLLGFPSAGKSSLISVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG++ G F +AD+PG+I A +G G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLVPNLGVITAGATVFTMADVPGLIPGASEGKGLGLDFLRHIERCAVLV 241 Query: 242 HIV--SALEENVQ--AAYQCILDELSAYNSELRKKI----EIVGLSQIDTVDSDTLARKK 293 H+V + E+N + + EL+ Y L K + +V L++ID ++ LA Sbjct: 242 HVVDCATYEDNRDPLSDIDALETELAQYTPSLSKDLAERPRVVVLNKIDVPEARDLAEIV 301 Query: 294 NELATQCGQVPFEFSSITGHGIPQI 318 G FE S+ T G+ ++ Sbjct: 302 RADVEARGLPVFEISTATREGLREL 326 >gi|168705694|ref|ZP_02737971.1| predicted GTPase [Gemmata obscuriglobus UQM 2246] Length = 214 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 108/213 (50%), Positives = 146/213 (68%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++++ GDGG G SFRREK++ GGPDGG GG GG V ++A N + L + Sbjct: 2 FVDRVELFVKGGDGGRGAASFRREKYVPMGGPDGGDGGDGGSVIVRADPNADNLAGLTMK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H+KA++GE GM +G ED+VL VP GT V + + + I DL + G +++A GG Sbjct: 62 KHWKAKNGEAGMGSKCAGKNSEDIVLLVPPGTLVRDRERGNTIKDLVEPGDEVVVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HFK+STN+AP PG G+E+ + +LK+IAD G++G PNAGKSTFL+ VTRA Sbjct: 122 GGRGNVHFKTSTNRAPRQFEPGEEGEERWVSFELKVIADAGLVGFPNAGKSTFLSRVTRA 181 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 P+IA YPFTT PNLGIV G F+LAD+PG Sbjct: 182 TPEIASYPFTTKSPNLGIVTVGDAGFVLADLPG 214 >gi|108800514|ref|YP_640711.1| GTPase ObgE [Mycobacterium sp. MCS] gi|119869653|ref|YP_939605.1| GTPase ObgE [Mycobacterium sp. KMS] gi|126436130|ref|YP_001071821.1| GTPase ObgE [Mycobacterium sp. JLS] gi|123069920|sp|Q1B629|OBG_MYCSS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277647|sp|A3Q2F3|OBG_MYCSJ RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277648|sp|A1UJ07|OBG_MYCSK RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|108770933|gb|ABG09655.1| GTP1/OBG subdomain protein [Mycobacterium sp. MCS] gi|119695742|gb|ABL92815.1| GTP1/OBG sub domain protein [Mycobacterium sp. KMS] gi|126235930|gb|ABN99330.1| GTP1/OBG sub domain protein [Mycobacterium sp. JLS] Length = 485 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 137/343 (39%), Positives = 206/343 (60%), Gaps = 15/343 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ R+G+GG G S REKF GGPDGG+GGRGG + + ++TL+DF + Sbjct: 3 RFVDRVVIHARAGNGGNGCASVHREKFKPLGGPDGGNGGRGGSIVLVVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H A G++G NR GA G D+ + VP GT V +E+G ++ DL G R A GG Sbjct: 63 HPHVVAPSGKQGAGSNRDGAAGADLEVRVPDGTVVLDEEG-RVLADLVGAGTRFEAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S + +AP +A G GQ + + L+LK +AD+G+IG P+AGKS+ +++++ Sbjct: 122 RGGLGNAALASRSRRAPGFALLGEKGQVRELTLELKTVADVGLIGFPSAGKSSLVSTISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A +G G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLVPNLGVVSAGDHTFTVADVPGLIPGASEGRGLGLEFLRHIERCAVLV 241 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNS---------ELRKKIEIVGLSQIDTVDSDT 288 H+V + +E + + + + EL+AY +L ++ V L++ID D+ Sbjct: 242 HVVDCATMEPGRDPISDIEALEAELAAYRPTLQGDSTLGDLAERPRAVVLNKIDVPDARE 301 Query: 289 LAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 LA ++E+A + G FE S++ G+ + L D + + R Sbjct: 302 LADFVRDEVAERFGWPVFEVSTVAREGLRPFIFALWDMVRTYR 344 >gi|145595991|ref|YP_001160288.1| GTPase ObgE [Salinispora tropica CNB-440] gi|261263075|sp|A4XAG1|OBG_SALTO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|145305328|gb|ABP55910.1| small GTP-binding protein [Salinispora tropica CNB-440] Length = 481 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 135/324 (41%), Positives = 194/324 (59%), Gaps = 6/324 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++++GDGG G +S REKF FGGPDGG+GG GG V + ++TL+DF ++ Sbjct: 4 FVDRVVLHLQAGDGGHGCVSVHREKFKPFGGPDGGNGGHGGSVSLVVDPQVHTLLDFHFR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G G NR GA G ++VL VP GT V DG +++ DL G +A GG Sbjct: 64 PHVKAANGRGGAGSNRDGANGANLVLKVPNGTVVQSGDG-TVLADLVGVGTTFEVARGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA ++ +AP +A G G + + L+LK +AD+G++G P+AGKS+ ++ ++ A Sbjct: 123 GGRGNASLANARRKAPGFAELGEPGDQIDVVLELKSVADVGLVGYPSAGKSSLISVISAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V+ F +AD+PG+I A G G+G FL+H ER VLLH Sbjct: 183 KPKIADYPFTTLVPNLGVVRVDNHTFTVADVPGLIPGAATGKGLGLEFLRHIERCAVLLH 242 Query: 243 IV--SAL--EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 +V +AL E + A I EL AY L + +V L+++D D LA Sbjct: 243 VVDTAALETERDPVADIDAIEAELVAYGG-LVDRPRLVALNKVDVPDGRDLAEIVRPDLE 301 Query: 299 QCGQVPFEFSSITGHGIPQILECL 322 G FE S+ T G+ +++ + Sbjct: 302 ARGFRVFEVSAATRAGLKELMYAM 325 >gi|315303297|ref|ZP_07873932.1| Obg family GTPase CgtA [Listeria ivanovii FSL F6-596] gi|313628344|gb|EFR96842.1| Obg family GTPase CgtA [Listeria ivanovii FSL F6-596] Length = 372 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 108/268 (40%), Positives = 167/268 (62%), Gaps = 9/268 (3%) Query: 65 FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGG 124 FKA+HGE GM ++ G +D+V+ VP GT V + D +I DL GQR ++A G GG Sbjct: 7 FKAEHGEHGMSKSMHGRGAQDLVVKVPQGTIVKDIDTGEIIADLVAHGQRAVIAKAGRGG 66 Query: 125 FGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKP 184 GN F + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A+P Sbjct: 67 RGNKRFATPANPAPELSENGEPGQERNVQLELKVLADVGLVGFPSVGKSTLLSVVSAARP 126 Query: 185 KIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHI 243 KIA Y FTT+ PNLG+V G + F++AD+PG+I+ A QG G+G +FL+H ERT V++H+ Sbjct: 127 KIAAYHFTTIVPNLGMVDAGDGRSFVMADLPGLIEGASQGVGLGHQFLRHIERTRVIVHV 186 Query: 244 V--SALEENVQ-AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 + S E V Y I +EL YN L ++ +I+ +++D D++ E T+ Sbjct: 187 IDMSGSEGRVPFDDYVAINNELEQYNLRLMERPQIIVANKMDMPDAE---ENLKEFKTKI 243 Query: 301 -GQVP-FEFSSITGHGIPQILECLHDKI 326 ++P F S++T G+ ++L + DK+ Sbjct: 244 EEEIPVFPISAVTKTGLRELLLAIADKL 271 >gi|293192375|ref|ZP_06609486.1| GTP-binding protein [Actinomyces odontolyticus F0309] gi|292820290|gb|EFF79284.1| GTP-binding protein [Actinomyces odontolyticus F0309] Length = 495 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 122/318 (38%), Positives = 182/318 (57%), Gaps = 14/318 (4%) Query: 14 GDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKG 73 G+GG G S +REKF GPDGG GG GG V ++ + TL+++ H +A +G G Sbjct: 3 GNGGNGVASIKREKFKPLAGPDGGDGGNGGSVILEVSEQETTLLNYHRSPHRRADNGTPG 62 Query: 74 MKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSS 133 M R G G D++L VP GT V G L+ DL G R ++A GG GG GNA S Sbjct: 63 MGDFRQGKTGADIILPVPEGTVVKSMSG-ELLADLTGAGARYVVAEGGRGGLGNAALASK 121 Query: 134 TNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTT 193 +AP +A G G+E+ + L+LK +AD+ ++G P+AGKS+ +A+++ A+PKIADYPFTT Sbjct: 122 ARKAPGFALLGEPGEERDVILELKSVADVALVGFPSAGKSSLIAALSSARPKIADYPFTT 181 Query: 194 LYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SALEENV 251 L PNLG+V G + +AD+PG+I A QG G+G FL+H ER V++H++ +A E + Sbjct: 182 LVPNLGVVSAGDTRYTVADVPGLIPGASQGRGLGLDFLRHIERCAVIVHVLDTAAFETDR 241 Query: 252 QAA--YQCILDELSAYNSELRK---------KIEIVGLSQIDTVDSDTLARKKNELATQC 300 + + I EL AY +L + + ++ L++ID D LA Sbjct: 242 EPVEDLRIIEAELEAYQGDLTQVEGYVPIMERPRVIVLNKIDIPDGRDLAEITRPDLESF 301 Query: 301 GQVPFEFSSITGHGIPQI 318 G E S+++ G+ ++ Sbjct: 302 GWPVLEVSAVSHEGLKEL 319 >gi|154508996|ref|ZP_02044638.1| hypothetical protein ACTODO_01513 [Actinomyces odontolyticus ATCC 17982] gi|153798630|gb|EDN81050.1| hypothetical protein ACTODO_01513 [Actinomyces odontolyticus ATCC 17982] Length = 495 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 122/318 (38%), Positives = 182/318 (57%), Gaps = 14/318 (4%) Query: 14 GDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKG 73 G+GG G S +REKF GPDGG GG GG V ++ + TL+++ H +A +G G Sbjct: 3 GNGGNGVASIKREKFKPLAGPDGGDGGNGGSVILEVSEQETTLLNYHRSPHRRADNGTPG 62 Query: 74 MKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSS 133 M R G G D++L VP GT V G L+ DL G R ++A GG GG GNA S Sbjct: 63 MGDFRQGKTGADIILPVPEGTVVKSMSG-ELLADLTGAGARYVVAEGGRGGLGNAALASK 121 Query: 134 TNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTT 193 +AP +A G G+E+ + L+LK +AD+ ++G P+AGKS+ +A+++ A+PKIADYPFTT Sbjct: 122 ARKAPGFALLGEPGEERDVILELKSVADVALVGFPSAGKSSLIAALSSARPKIADYPFTT 181 Query: 194 LYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SALEENV 251 L PNLG+V G + +AD+PG+I A QG G+G FL+H ER V++H++ +A E + Sbjct: 182 LVPNLGVVSAGDTRYTVADVPGLIPGASQGRGLGLDFLRHIERCAVIVHVLDTAAFETDR 241 Query: 252 QAA--YQCILDELSAYNSELRK---------KIEIVGLSQIDTVDSDTLARKKNELATQC 300 + + I EL AY +L + + ++ L++ID D LA Sbjct: 242 EPVEDLRIIEAELEAYQGDLTQVEGYVPIMERPRVIVLNKIDIPDGRDLAEITRPDLESF 301 Query: 301 GQVPFEFSSITGHGIPQI 318 G E S+++ G+ ++ Sbjct: 302 GWPVLEVSAVSHEGLKEL 319 >gi|297626050|ref|YP_003687813.1| GTPase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921815|emb|CBL56375.1| GTPase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 533 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 134/340 (39%), Positives = 196/340 (57%), Gaps = 15/340 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D + + +G GG G S REKF GGPDGG+GGRGG V ++ L+TL+D+ +Q Sbjct: 6 FVDRVSLEVHAGKGGNGCASVLREKFKPLGGPDGGNGGRGGSVILRIDPQLSTLVDYHHQ 65 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 A +G+ G ++RSGA G DVVL VP GT V + D ++ DL + ++A GG Sbjct: 66 SQRSATNGQPGQGKHRSGANGADVVLPVPEGTVVSDLDTGEVLADLTGDETEYVVARGGR 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN S +AP +A G G + I L+LK+IADIG++G P+AGKS+ +A+++ A Sbjct: 126 GGLGNEALASKARKAPGFALLGEEGDARNIQLELKVIADIGLVGFPSAGKSSIIAAISAA 185 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+VK G + +AD+PG+I A QG G+G FL+H ER ++H Sbjct: 186 KPKIADYPFTTLVPNLGVVKAGDITYTVADVPGLIPGASQGKGLGFDFLRHIERCQAIVH 245 Query: 243 IVSALEENVQAAYQCILD---ELSAYNSELR------KKIEIVGLSQIDTVDSDTLARKK 293 ++ A Y+ D +L A +EL + ++ L+++D D +A Sbjct: 246 VIDT------ATYEPGRDPVRDLDAIEAELHAHGGLDDRPRLIVLNKVDVPDGKVIADMV 299 Query: 294 NELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 G FE S+ TG G+ Q++ + + R E+ Sbjct: 300 LPELEARGLRVFETSAKTGEGMKQLVWAMAHLVEERRKEH 339 >gi|196228291|ref|ZP_03127158.1| GTP-binding protein Obg/CgtA [Chthoniobacter flavus Ellin428] gi|196227694|gb|EDY22197.1| GTP-binding protein Obg/CgtA [Chthoniobacter flavus Ellin428] Length = 387 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 123/332 (37%), Positives = 183/332 (55%), Gaps = 49/332 (14%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ ++GDGG G +FRRE F+ GGPDGG GGRGG V ++A ++ + L F Y+ Sbjct: 2 FVDHIRIFAQAGDGGDGAATFRRESFVPMGGPDGGDGGRGGSVVLRADTHTDNLTPFFYE 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVF-----EEDG---------------- 101 KA+HGE+G R G D ++ VP+GT V+ E +G Sbjct: 62 PIVKAKHGERGQSRQCFGKSAPDKIVPVPIGTMVYRLPSEEPEGPDPMVTHGDGAMFVDF 121 Query: 102 ----------------------ISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPY 139 + LI DL + GQ +L GG GG GN HFKSS NQAP Sbjct: 122 TKTPEGEDRPKRDRKAPIDPNELELIADLTKPGQEFVLCKGGKGGIGNVHFKSSRNQAPT 181 Query: 140 YANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG 199 G G++ + +L+ IAD G++G PNAGKST L ++ A PK+A YPFTTL P++G Sbjct: 182 RYTEGTPGEQGYFYFELRKIADAGLVGYPNAGKSTLLGRISAAHPKVAPYPFTTLTPHIG 241 Query: 200 IVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV----SALEENVQAA 254 +V+ GY+ +ADIPG+I+ AH+ G+G FL+H R +L+ ++ S E ++ Sbjct: 242 VVELPGYRRLTVADIPGLIEGAHENVGLGHDFLRHIVRCKLLVFVLDMAGSEGREPLE-D 300 Query: 255 YQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 Q + EL Y+ +L ++ IV +++D D+ Sbjct: 301 LQKLRKELDLYDPKLSERPWIVVANKMDLPDA 332 >gi|182438748|ref|YP_001826467.1| GTPase ObgE [Streptomyces griseus subsp. griseus NBRC 13350] gi|326779394|ref|ZP_08238659.1| GTP-binding protein Obg/CgtA [Streptomyces cf. griseus XylebKG-1] gi|75539194|sp|P95758|OBG_STRGR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261263104|sp|B1VXD8|OBG_STRGG RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|1783294|dbj|BAA13501.1| Obg protein [Streptomyces griseus] gi|178467264|dbj|BAG21784.1| putative GTP-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326659727|gb|EGE44573.1| GTP-binding protein Obg/CgtA [Streptomyces cf. griseus XylebKG-1] Length = 478 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 131/320 (40%), Positives = 192/320 (60%), Gaps = 6/320 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ +G+GG G S REKF GGPDGG+GGRGGDV + ++ TL+D+ + Sbjct: 4 FVDRVELHAAAGNGGHGCASVHREKFKPLGGPDGGNGGRGGDVILVVEQSVTTLLDYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG G+D+VL VP GT V ++ G +++ DL +G + GG Sbjct: 64 PHRKATNGQPGAGDNRSGKDGQDLVLPVPDGTVVLDKAG-NVLADLVGQGTTFVAGQGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G+ + I L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALASARRKAPGFALLGEPGESRDIVLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGSTVYTIADVPGLIPGASQGKGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + LE + I +EL Y L + IV L+++D D LA Sbjct: 243 VLDTATLESDRDPVSDLDMIEEELRLYGG-LENRPRIVALNKVDIPDGQDLADMIRPDLE 301 Query: 299 QCGQVPFEFSSITGHGIPQI 318 G FE S+I G+ ++ Sbjct: 302 ARGYRVFEVSAIAHKGLKEL 321 >gi|282861861|ref|ZP_06270925.1| GTP-binding protein Obg/CgtA [Streptomyces sp. ACTE] gi|282563677|gb|EFB69215.1| GTP-binding protein Obg/CgtA [Streptomyces sp. ACTE] Length = 480 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 134/333 (40%), Positives = 195/333 (58%), Gaps = 6/333 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ +G+GG G S REKF GGPDGG+GGRGGDV + ++ TL+D+ + Sbjct: 4 FVDRVELHAAAGNGGHGVASVHREKFKPLGGPDGGNGGRGGDVILVVEQSVTTLLDYHHH 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG G+D+VL VP GT V ++ G +++ DL +G + GG Sbjct: 64 PHRKATNGQPGAGDNRSGKDGQDLVLPVPDGTVVLDKAG-NVLADLVGQGTTFVAGQGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G+ + I L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALASARRKAPGFALLGEPGESRDIVLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGSTVYTIADVPGLIPGASQGKGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + LE + I +EL Y L + IV L+++D D LA Sbjct: 243 VLDTATLESDRDPVSDLDMIEEELRLYGG-LENRPRIVALNKVDIPDGQDLADMIRPDLE 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 G FE S+I G+ ++ L I R Sbjct: 302 ARGYRVFEVSAIAHKGLNELSYALAGIIAEARA 334 >gi|86739929|ref|YP_480329.1| GTPase ObgE [Frankia sp. CcI3] gi|123737661|sp|Q2JDP2|OBG_FRASC RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|86566791|gb|ABD10600.1| GTP1/OBG subdomain [Frankia sp. CcI3] Length = 529 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 137/330 (41%), Positives = 196/330 (59%), Gaps = 8/330 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ +GDGG G S REKF GGPDGG GGRGGDV + ++ TL+DF + Sbjct: 4 FVDRVVLHATAGDGGHGCASIHREKFKPLGGPDGGDGGRGGDVRLVVDPSVTTLLDFHFH 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H +A G G NR GA G D+VL VP GT V EDG +I DL G +LA GG Sbjct: 64 PHQRASRGRPGQGSNRHGADGADLVLPVPDGTVVLTEDGEQII-DLVGPGSAFVLARGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G++ L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGRGNAALASARRKAPGFAELGEPGEQLDAVLELKTVADVALVGFPSAGKSSLVSVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIADYPFTTL PNLG+ + G + + +AD+PG+I A +G G+G FL+H ER V++ Sbjct: 183 KPKIADYPFTTLVPNLGVAQAGDRPPYTVADVPGLIPGASEGRGLGLEFLRHIERCSVIV 242 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR-KKNEL 296 H++ + LE + I EL+AY+++L + +V L++ID D+ LA EL Sbjct: 243 HVLDCATLEPGRDPMTDLDVIEAELAAYSADLSDRPRLVVLNKIDVPDAAELAELVAPEL 302 Query: 297 ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + V F S+ T G+ + L D + Sbjct: 303 RARDLAV-FAVSTATRRGVHALSLALADLV 331 >gi|289426313|ref|ZP_06428059.1| Obg family GTPase CgtA [Propionibacterium acnes SK187] gi|289153478|gb|EFD02193.1| Obg family GTPase CgtA [Propionibacterium acnes SK187] Length = 456 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 105/273 (38%), Positives = 162/273 (59%), Gaps = 5/273 (1%) Query: 47 IQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLIC 106 ++ + TL+D+ +Q KA +GE G N++GA G D++L VP GT V + D L+ Sbjct: 1 MRVDPQVTTLVDYHWQSTRKATNGESGRGDNQAGANGSDMILAVPEGTVVSDADTGELLG 60 Query: 107 DLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIG 166 DL G +++A GG GG GNA +S +AP +A G G+E+ I L+LK++ADIG++G Sbjct: 61 DLVGVGAELVVAAGGRGGLGNAALANSARKAPGFALLGEAGEERKILLELKVVADIGLVG 120 Query: 167 LPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGI 226 P+AGKS+ +A+++RAKPKIADYPFTTL PNLG+V G + +AD+PG+I A G G+ Sbjct: 121 FPSAGKSSLIAAISRAKPKIADYPFTTLVPNLGVVVAGETTYTVADVPGLIPGASVGKGL 180 Query: 227 GDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 G FL+H ER ++H++ + + I EL A+ L + +V L+++D Sbjct: 181 GFDFLRHIERCRAIVHVIDCATYEPGRDPVSDLDVIEGELIAHGG-LEDRPRLVVLNKVD 239 Query: 283 TVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 D+ LA + + G S+ +G G+ Sbjct: 240 VPDAADLADIIFDDVAERGWPVSRVSTKSGEGL 272 >gi|328882424|emb|CCA55663.1| GTP-binding protein Obg [Streptomyces venezuelae ATCC 10712] Length = 479 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 133/321 (41%), Positives = 197/321 (61%), Gaps = 8/321 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G+GG G S REKF GGPDGG+GGRGGDV + + TL+D+ + Sbjct: 4 FVDRVELHVAAGNGGHGCASVHREKFKPLGGPDGGNGGRGGDVILVVDQAVTTLLDYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG G+D+VL VP GT V ++ G +++ DL +G + GG Sbjct: 64 PHRKATNGQPGAGDNRSGKDGQDLVLNVPDGTVVLDKQG-NVLADLVGQGTTFVAGQGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G+ + I L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALSSARRKAPGFALLGEPGEARDIVLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGSTVYTIADVPGLIPGASQGRGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK-KNELA 297 ++ + LE + I +EL Y L + IV L+++D D LA + EL Sbjct: 243 VLDTATLESDRDPVTDLDIIEEELRQYGG-LDDRPRIVVLNKVDIPDGQDLADMIRPELE 301 Query: 298 TQCGQVPFEFSSITGHGIPQI 318 + QV FE S++ G+ ++ Sbjct: 302 ERGYQV-FEVSAVARLGLKEL 321 >gi|320010852|gb|ADW05702.1| GTP-binding protein Obg/CgtA [Streptomyces flavogriseus ATCC 33331] Length = 478 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 131/317 (41%), Positives = 192/317 (60%), Gaps = 6/317 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ +G+GG G S REKF GGPDGG+GGRGGDV + ++ TL+D+ + Sbjct: 4 FVDRVELHAAAGNGGHGVASVHREKFKPLGGPDGGNGGRGGDVILVVEQSVTTLLDYHHH 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG G+D+VL VP GT V ++ G +++ DL +G + GG Sbjct: 64 PHRKATNGQPGAGDNRSGKDGQDLVLPVPDGTVVLDKAG-NVLADLVGQGTTFVAGQGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G+ + I L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALASARRKAPGFALLGEPGESRDIVLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGSTVYTIADVPGLIPGASQGKGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + LE + + I +EL Y L + IV L+++D D LA Sbjct: 243 VLDTATLESDRDPLSDLDMIEEELRLYGG-LEDRPRIVALNKVDIPDGQDLADMIRPDLE 301 Query: 299 QCGQVPFEFSSITGHGI 315 + G FE S+I G+ Sbjct: 302 ERGYRVFEVSAIAHKGL 318 >gi|281356980|ref|ZP_06243470.1| GTP-binding protein Obg/CgtA [Victivallis vadensis ATCC BAA-548] gi|281316538|gb|EFB00562.1| GTP-binding protein Obg/CgtA [Victivallis vadensis ATCC BAA-548] Length = 338 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 124/302 (41%), Positives = 197/302 (65%), Gaps = 5/302 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+A + +++GDGG G SF REKF+ GGPDGG GG GG+V ++AT++ +L+ Y Sbjct: 2 FVDKATITVKAGDGGNGCCSFHREKFVPRGGPDGGDGGAGGNVILEATNSEQSLVSLIYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +H++A++GE+G N G K +D++L VPVGT + + LI D+++ G+++ +A GG Sbjct: 62 RHYQARNGEQGKGSNMHGRKAQDIILKVPVGTVITDRTTGELIADMEENGKQVTVAVGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++TN+AP PG G+E+ + L+LK IAD+G++G PNAGKST L +V+ A Sbjct: 122 GGRGNPRFATNTNRAPREWEPGEPGEERELNLELKTIADVGLVGYPNAGKSTLLRAVSAA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PK+A YPFTTL+P +G+++ Y +ADIPG+I+ AH G+G FLKH ERT VL Sbjct: 182 RPKVAPYPFTTLHPVVGVIEYPDYSRLTVADIPGLIEGAHDNVGLGHAFLKHIERTVVLA 241 Query: 242 HIVSALEENVQAAYQCIL---DELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELA 297 +++ + + + + +EL Y L K+ +V +++D ++ L + ELA Sbjct: 242 YVLDMGGVDGRLPWDDLAHLREELELYMKGLSKRPALVVANKMDLPGAAENLELLRAELA 301 Query: 298 TQ 299 ++ Sbjct: 302 SE 303 >gi|110005443|emb|CAK99765.1| probable gtp1/obg protein [Spiroplasma citri] Length = 434 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 121/304 (39%), Positives = 184/304 (60%), Gaps = 6/304 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D A + + +G GG G ++F RE ++ GGP GG GG GG + +NTL+D + Sbjct: 1 MKFIDVATIKLFAGKGGDGAVAFHRELYVPKGGPSGGDGGNGGSIIFVGDEGMNTLLDLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ+ KA GE G +N G + + VP+GT ++ +I D+ Q I+L G Sbjct: 61 YQREIKAVDGENGSIKNMHGKNAANKYIKVPLGTLIYNNKTNEIIGDITTHQQEIVLVKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F +S N+AP G LG+ I +LK++AD+G++GLPNAGKST LA ++ Sbjct: 121 GQGGRGNARFANSKNKAPTIFEAGDLGETLEIRCELKVLADVGLVGLPNAGKSTLLAKIS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 +AKP+IADYPFTTL P LG+V+ + + F++AD+PG+I A G G+G FL+H ER + Sbjct: 181 KAKPQIADYPFTTLTPQLGVVQDQNHHSFVVADLPGLIAGAAAGKGLGHDFLRHIERCKL 240 Query: 240 LLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT-VDSDTLARKKN 294 ++H++ E+V Y + EL YN +L + EI+ +++D + + L + K Sbjct: 241 IVHVLDMSGNYGTEDVYQNYLNVKTELKKYNYKLELRPEIIVANKMDLDIAAKNLIKFKT 300 Query: 295 ELAT 298 ++ T Sbjct: 301 QIPT 304 >gi|239941099|ref|ZP_04693036.1| GTPase ObgE [Streptomyces roseosporus NRRL 15998] gi|239987578|ref|ZP_04708242.1| GTPase ObgE [Streptomyces roseosporus NRRL 11379] gi|291444540|ref|ZP_06583930.1| obg protein [Streptomyces roseosporus NRRL 15998] gi|291347487|gb|EFE74391.1| obg protein [Streptomyces roseosporus NRRL 15998] Length = 478 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 134/333 (40%), Positives = 196/333 (58%), Gaps = 6/333 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ +G+GG G S REKF GGPDGG+GGRGGDV + ++ TL+D+ + Sbjct: 4 FVDRVELHAAAGNGGHGCASVHREKFKPLGGPDGGNGGRGGDVILVVEQSVTTLLDYHHH 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G+ G NRSG G+D+VL VP GT V ++ G +++ DL +G + GG Sbjct: 64 PHRKATNGQPGAGDNRSGKDGQDLVLPVPDGTVVLDKAG-NVLADLIGQGTTFVAGQGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G+ + I L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALASARRKAPGFALLGEPGESRDIVLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGSTVYTIADVPGLIPGASQGKGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SALEENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + LE + + I +EL Y L + IV L+++D D LA Sbjct: 243 VLDTATLESDRDPVSDLDMIEEELRLYGG-LDDRPRIVALNKVDIPDGQDLADMIRPDLE 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 G FE S+I G+ ++ L I R Sbjct: 302 ARGYRVFEVSAIAHKGLNELSYALAGIIAEARA 334 >gi|197294635|ref|YP_001799176.1| GTPase ObgE [Candidatus Phytoplasma australiense] gi|261277665|sp|B1VAF2|OBG_PHYAS RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|171853962|emb|CAM11925.1| Putative GTPase [Candidatus Phytoplasma australiense] Length = 421 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 115/287 (40%), Positives = 181/287 (63%), Gaps = 1/287 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F+DEA + +G+GG G ++FRREK++ FGGP GG+GG GG V TL+ + Sbjct: 4 LHFIDEAFNEVYAGNGGHGIVAFRREKYVPFGGPAGGNGGNGGSVIFVGEQGETTLLKLK 63 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ+H KA HG G ++++GA + + VP+GT F D + ++ + +++A G Sbjct: 64 YQKHLKASHGFNGKNKSQNGANAPHLYVKVPLGTVFFTMDN-HFLGEILHHQETLVIAKG 122 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN + N AP YA G LG+ I ++LK++AD+G++G P+ GKS+ ++ ++ Sbjct: 123 GKGGRGNKALANFKNPAPSYAEKGDLGEHFKIKIQLKVLADVGLLGFPSVGKSSLISLIS 182 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +A+PKI YPFTTL+P+LG+V F++AD+PG+I NAH G G+G +FLKH ER VL Sbjct: 183 KAQPKIDSYPFTTLFPHLGVVLIDGFSFVIADLPGLIPNAHLGQGLGIQFLKHIERCRVL 242 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 +H++S + Y + EL YNS L +K +I+ +++D D++ Sbjct: 243 VHLISMQSLDPYKDYVALNKELQQYNSTLVEKKQIIVANKMDLPDAE 289 >gi|315604380|ref|ZP_07879446.1| Spo0B-associated GTP-binding protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315314086|gb|EFU62137.1| Spo0B-associated GTP-binding protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 507 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 129/344 (37%), Positives = 191/344 (55%), Gaps = 14/344 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ G+GG G S +REKF GPDGG GG GG V ++ + TL+ + Sbjct: 4 FVDRVTLHAAGGNGGNGVASIKREKFKPLAGPDGGDGGNGGSVILEVSPQETTLLSYHRS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H +A G GM R G G D+VL VP GT V G L+ DL G R ++A GG Sbjct: 64 PHRRADSGTAGMGDFRQGKNGADIVLPVPDGTVVKSMSG-ELLADLTGAGARFVVAEGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S +AP +A G G+E+ + L+LK +AD+ ++G P+AGKS+ +A+++ A Sbjct: 123 GGLGNAALASKARKAPGFALLGEPGEERDVVLELKSVADVALVGFPSAGKSSLIAALSSA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER V++H Sbjct: 183 RPKIADYPFTTLVPNLGVVSAGDTRYTVADVPGLIPGASQGRGLGLDFLRHIERCAVIVH 242 Query: 243 IV--SALEENVQAA--YQCILDELSAYNSELR---------KKIEIVGLSQIDTVDSDTL 289 ++ +A E + + + I EL AY +L ++ ++ L++ID D L Sbjct: 243 VLDTAAFETDREPVEDLRIIEAELEAYQGDLTQIEGYVPIMQRPRVIVLNKIDVPDGRDL 302 Query: 290 ARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 A G E S+++ G+ ++ L D + RG+ Sbjct: 303 AEITRPDLESFGWPVLEVSAVSHEGLKELSFVLADIVEEERGKR 346 >gi|302869334|ref|YP_003837971.1| GTP-binding protein Obg/CgtA [Micromonospora aurantiaca ATCC 27029] gi|315504191|ref|YP_004083078.1| gtp-binding protein obg/cgta [Micromonospora sp. L5] gi|302572193|gb|ADL48395.1| GTP-binding protein Obg/CgtA [Micromonospora aurantiaca ATCC 27029] gi|315410810|gb|ADU08927.1| GTP-binding protein Obg/CgtA [Micromonospora sp. L5] Length = 483 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 131/328 (39%), Positives = 192/328 (58%), Gaps = 6/328 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++++GDGG G +S REKF FGGPDGG+GG GG V + + TL+DF ++ Sbjct: 4 FVDRVVLHMQAGDGGHGCVSIHREKFKPFGGPDGGNGGHGGSVSLVVDPQVTTLLDFHFR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA++G+ G NR GA G D+V+ VP GT V DG ++ DL G A GG Sbjct: 64 PHLKAENGKGGAGSNRDGANGRDLVIKVPNGTVVQSLDG-EVLADLVGVGTTFEAARGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA ++ +AP +A G G + L+LK +AD+G++G P+AGKS+ ++ ++ A Sbjct: 123 GGRGNASLANARRKAPGFAELGEPGDRLDVVLELKSVADVGLVGFPSAGKSSLISVISAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V+ F +AD+PG+I A G G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVRVDNHTFTVADVPGLIPGAASGKGLGLEFLRHVERCAVLVH 242 Query: 243 IV--SALE--ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + LE + A I ELS Y L + +V L+++D D LA Sbjct: 243 VIDTATLEPGRDPLADIDAIESELSQYGG-LADRPRLVALNKVDVPDGKDLADIVRPDLE 301 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKI 326 G F+ S+ T G+ ++ + + + Sbjct: 302 ARGLRVFDVSAATREGLRELTYAMAELV 329 >gi|118471780|ref|YP_888887.1| GTPase ObgE [Mycobacterium smegmatis str. MC2 155] gi|261277646|sp|A0R149|OBG_MYCS2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|118173067|gb|ABK73963.1| GTP-binding protein Obg/CgtA [Mycobacterium smegmatis str. MC2 155] Length = 485 Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 140/345 (40%), Positives = 203/345 (58%), Gaps = 19/345 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ R+G+GG G S REKF GGPDGG+GGRGG V + ++TL+DF + Sbjct: 3 RFVDRVVIHARAGNGGNGCASVHREKFKPLGGPDGGNGGRGGSVILVVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H A G+ G NR GA G D+ + VP GT V +E+G ++ DL G R A GG Sbjct: 63 HPHVVAPSGKPGAGSNRDGAAGIDLEVRVPDGTVVLDENG-RMLADLVGAGTRFEAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G GQE+ + L+LK +AD+G+IG P+AGKS+ +++++ Sbjct: 122 RGGLGNAALASRARKAPGFALLGEKGQERDLTLELKTVADVGLIGFPSAGKSSLVSTISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G + +AD+PG+I A +G G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLVPNLGVVSAGENTYTVADVPGLIPGASEGRGLGLDFLRHLERCAVLV 241 Query: 242 HIVS---------------ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 H+V ALE + AAY L SA +L + V L++ID D+ Sbjct: 242 HVVDCATMEPGRDPISDIEALEAEL-AAYTPTLQGDSALG-DLASRPRAVVLNKIDVPDA 299 Query: 287 DTLAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 LA ++E+A + G +E S+++ G+ ++ L + + R Sbjct: 300 RELADFVRDEVAGRFGWPVYEISTVSRDGLRPLIFALWEMVKKYR 344 >gi|84498601|ref|ZP_00997364.1| putative GTP-binding protein [Janibacter sp. HTCC2649] gi|84381134|gb|EAP97019.1| putative GTP-binding protein [Janibacter sp. HTCC2649] Length = 510 Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 133/346 (38%), Positives = 196/346 (56%), Gaps = 14/346 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F+D + + +GDGG G S +REKF GGPDGG+GG+GG V ++ TL+D+ Sbjct: 3 VNFVDRVVLNVAAGDGGHGVASVKREKFKPLGGPDGGNGGKGGSVVLRVDPQSTTLLDYH 62 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + H +A +G+ G R+G G D+VL VP GT V G ++ DL ++A G Sbjct: 63 HTPHRRAPNGKPGGGDERNGGDGGDLVLPVPEGTVVKNAAG-DILADLVGHDAEFVVAAG 121 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN S+ AP +A G G+ I L+LK +AD+ +IG P+AGKS+ ++ V+ Sbjct: 122 GRGGLGNKQLASARRVAPGFALLGEPGETLEIVLELKSLADVALIGFPSAGKSSLVSVVS 181 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+V G + +AD+PG+I A +G G+G FL+H ER VL Sbjct: 182 AAKPKIADYPFTTLIPNLGVVTAGSMRYTIADVPGLIPGASEGKGLGLEFLRHVERCSVL 241 Query: 241 LHIV--SALEEN--VQAAYQCILDELSAYNSE-------LRKKIEIVGLSQIDTVDSDTL 289 +H+V + LE N + I EL+AY + L ++ IV L++ D D+ L Sbjct: 242 VHVVDCATLESNRDPMSDLDVIEAELAAYVPDDSLGGRPLSERTRIVVLNKADVPDARDL 301 Query: 290 ARK-KNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 A K +L + +V S++ G+ ++ L + + R E E Sbjct: 302 AEMVKPDLEARGLEVHI-VSAVAHTGLKELTFSLANHVTEARKEME 346 >gi|120404898|ref|YP_954727.1| GTPase ObgE [Mycobacterium vanbaalenii PYR-1] gi|261277698|sp|A1TC21|OBG_MYCVP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|119957716|gb|ABM14721.1| GTP1/OBG sub domain protein [Mycobacterium vanbaalenii PYR-1] Length = 480 Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 135/339 (39%), Positives = 201/339 (59%), Gaps = 15/339 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ R+G+GG G S REKF GGPDGG+GGRGG V ++TL+DF + Sbjct: 3 RFIDRVVIHARAGNGGNGCASVHREKFKPLGGPDGGNGGRGGSVVFVVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H A G++G NR GA G D+ + VP GT V +E G ++ DL EG R A GG Sbjct: 63 HPHVVAPSGKQGAGSNRDGAAGTDLEVKVPDGTVVLDEHG-QILADLVGEGTRFEAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+ + + L+LK +AD+G++G P+AGKS+ +++++ Sbjct: 122 RGGLGNAALASRARKAPGFALLGEKGESRDLTLELKTVADVGLVGFPSAGKSSLVSTISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLAPNLGVVSAGEHTYTVADVPGLIPGASQGRGLGLDFLRHIERCAVLV 241 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNS---------ELRKKIEIVGLSQIDTVDSDT 288 H++ + LE + + + + EL+AY +L ++ V L++ID ++ Sbjct: 242 HVIDCATLEPGRDPISDIEALEAELAAYTPTLQGDSTLGDLAERPRAVVLNKIDVPEARE 301 Query: 289 LAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 LA + E+ + G FE S++ G+ Q+ L D + Sbjct: 302 LADFVREEIEAKFGWPVFEISTVAREGLRQLTFALWDMV 340 >gi|240170912|ref|ZP_04749571.1| GTPase ObgE [Mycobacterium kansasii ATCC 12478] Length = 479 Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 138/336 (41%), Positives = 190/336 (56%), Gaps = 15/336 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D V++R+G GG G S REKF GGPDGG+GGRGG + ++TL+DF + Sbjct: 3 RFVDRVVVHVRAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H A G+ GM NR GA G D+ + VP GT V +E G L+ DL G R A GG Sbjct: 63 HPHITAPSGKPGMGSNRDGAAGADLEVKVPDGTVVLDETG-RLLADLVGAGTRFAAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G GQ + + L+LK +AD+G+IG P+AGKS+ ++ ++ Sbjct: 122 RGGLGNAALASRARKAPGFALLGEPGQARDLTLELKTVADVGLIGFPSAGKSSLVSVISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A QG G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLVPNLGVVSAGEHAFTVADVPGLIPGAAQGRGLGLDFLRHIERCAVLV 241 Query: 242 HIVSALE----ENVQAAYQCILDELSAYNSELR---------KKIEIVGLSQIDTVDSDT 288 H+V + + + EL+AY LR ++ V L++ID ++ Sbjct: 242 HVVDCATNEPGRDPISDIDALEAELAAYTPTLRGDSVLDDLTERPRAVVLNKIDVPEARE 301 Query: 289 LARKKNELATQCGQVPFEFSSITGHGI-PQILECLH 323 LA + Q G F S++T + P I H Sbjct: 302 LAEFVRDEIAQRGWPVFLVSTVTRENLQPLIFGLWH 337 >gi|183983745|ref|YP_001852036.1| GTP1/OBGfamily GTP-binding protein Obg [Mycobacterium marinum M] gi|261266894|sp|B2HMG1|OBG_MYCMM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|183177071|gb|ACC42181.1| GTP1/OBG-family GTP-binding protein Obg [Mycobacterium marinum M] Length = 479 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 138/325 (42%), Positives = 192/325 (59%), Gaps = 18/325 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ R+G GG G S REKF GGPDGG+GGRGG V ++TL+DF + Sbjct: 3 RFVDRVVIHTRAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSVVFVVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H A G++GM NR GA G D+ + VP GT V +++G L+ DL G R A GG Sbjct: 63 RPHVTAASGKQGMGSNRDGAAGADLEVKVPDGTVVLDDNG-RLLADLVGAGTRFEAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G GQ + + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 RGGLGNAALASRARKAPGFALLGEPGQARDLTLELKTVADVGLVGFPSAGKSSLVSVISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G FI+AD+PG+I A QG G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLVPNLGVVAAGGHSFIVADVPGLIPGASQGRGLGLDFLRHIERCAVLV 241 Query: 242 HIV---------------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 H+V ALE + AAYQ L + A +L ++ V L++ID ++ Sbjct: 242 HVVDCATAEPGRDPISDIDALEAEL-AAYQPTL-QGDAVLDDLAERPRAVVLNKIDVPEA 299 Query: 287 DTLARKKNELATQCGQVPFEFSSIT 311 LA + Q G F S++T Sbjct: 300 RELAEFVEDELAQRGWPVFLVSTVT 324 >gi|309811079|ref|ZP_07704877.1| Obg family GTPase CgtA [Dermacoccus sp. Ellin185] gi|308435043|gb|EFP58877.1| Obg family GTPase CgtA [Dermacoccus sp. Ellin185] Length = 508 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 138/346 (39%), Positives = 202/346 (58%), Gaps = 14/346 (4%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F+D + + +G+GG G S REKF GGPDGG+GG GGDV ++ + TL+++ Sbjct: 3 INFVDRVVLNVTAGNGGHGVASVHREKFKPLGGPDGGNGGHGGDVVLEVDPQVTTLLEYH 62 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 H AQ+G+ G R+GA G+D+VL VP GT V + DG +++ DL G R + A G Sbjct: 63 KSPHRSAQNGKPGAGDERNGADGDDLVLPVPEGTVVKDRDG-TILADLVGFGSRYVAAAG 121 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN S +AP +A G G+ I L+LK +AD+ +IG P+AGKS+ ++ V+ Sbjct: 122 GRGGLGNKALASQRRKAPGFALLGEPGESNDIVLELKTLADVALIGFPSAGKSSLVSVVS 181 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNLG+V G + F +AD+PG+I A QG G+G FL+H ER VL Sbjct: 182 AAKPKIADYPFTTLVPNLGVVTAGSQRFTIADVPGLIPGASQGKGLGLEFLRHVERCSVL 241 Query: 241 LHIV--SALE--ENVQAAYQCILDELSAYNSE-------LRKKIEIVGLSQIDTVDSDTL 289 +H++ + LE + + I ELS Y ++ L ++ IV L++ D D+ L Sbjct: 242 VHVIDCATLEPGRDPMSDLDTIEHELSEYVADESLGGKPLSERTRIVVLNKADVPDAREL 301 Query: 290 ARK-KNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 A K +L + +V F S++ G+ ++ L + R E E Sbjct: 302 AEMVKPDLEARGLEV-FIVSAVAHQGLKELTFALAKHVEQARQEVE 346 >gi|332670929|ref|YP_004453937.1| GTP-binding protein Obg/CgtA [Cellulomonas fimi ATCC 484] gi|332339967|gb|AEE46550.1| GTP-binding protein Obg/CgtA [Cellulomonas fimi ATCC 484] Length = 507 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 131/344 (38%), Positives = 196/344 (56%), Gaps = 14/344 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ GDGG G S REKF GPDGG+GG GG V ++ + TL++F + Sbjct: 4 FVDRVVLHATGGDGGHGCASIHREKFKPLAGPDGGNGGNGGSVILEVDPQVTTLLEFHHL 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H +A G +GM +R GA G D+VL VP GT V DG ++ DL G R + A GG Sbjct: 64 PHRRAASGTQGMGDHRQGATGPDLVLGVPDGTVVKGPDG-EVLADLVGVGARYVAAAGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S +AP +A G G+ + + L+LK IAD+ ++G P+AGKS+ +A+++ A Sbjct: 123 GGLGNAALSSPRRKAPGFALLGEPGETQDVVLELKTIADVALVGYPSAGKSSLVAAISAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G + +AD+PG+I A QG G+G FL+H ER V++H Sbjct: 183 RPKIADYPFTTLVPNLGVVQAGSSRYTVADVPGLIPGASQGRGLGLEFLRHIERCAVIVH 242 Query: 243 IV--SALEENVQAA--YQCILDELSAYNSE---------LRKKIEIVGLSQIDTVDSDTL 289 ++ + LE + I EL++Y + L ++ +V L++ID ++ L Sbjct: 243 VLDCATLEPDRDPVSDLDVIEAELASYAGDLGIEGGRVPLTERPRVVVLNKIDVPEARDL 302 Query: 290 ARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 A G FE S+ + G+ + L +++ R E+ Sbjct: 303 ADLVRPELEARGLPVFEVSTASHEGLRPLTFALAERVERARRES 346 >gi|118376354|ref|XP_001021359.1| GTP1/OBG family protein [Tetrahymena thermophila] gi|89303126|gb|EAS01114.1| GTP1/OBG family protein [Tetrahymena thermophila SB210] Length = 377 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 133/338 (39%), Positives = 199/338 (58%), Gaps = 28/338 (8%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 KF+D+ KV ++G+GG G +S R++ + G PDGG GG+GGD+ ++A+ + L F+ Sbjct: 32 KFVDQVKVKFQAGNGGNGCVSHFRDRNVLTGAPDGGDGGKGGDILLKASHHFTDLHMFK- 90 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE---------EDGI-------SLI 105 + +G+ G R G G D+ ++VPVGT ++E + G+ + Sbjct: 91 GKPIIGNNGKSGGGLGRFGKDGGDLHISVPVGTLIYEILSETQSVNQAGVRKIQYNKKFL 150 Query: 106 CDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGII 165 DLD+EG+ +++ GG GG GN + +S Q G LGQ K I+++LK IAD G++ Sbjct: 151 SDLDEEGKEVLIVKGGKGGRGNQNHRSIKEQ-----EKGTLGQVKEIFMELKCIADCGLV 205 Query: 166 GLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGA 224 G PNAGKSTFLASV+R+ PKIA+YPFTTL P +G VK F +ADIPGII+ +HQ Sbjct: 206 GFPNAGKSTFLASVSRSLPKIANYPFTTLTPLVGKVKFVDNSAFTIADIPGIIEESHQNK 265 Query: 225 GIGDRFLKHTERTHVL---LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQI 281 G+G FL+H ERTHVL L I + E ++ + +EL Y S+ K IV ++ Sbjct: 266 GLGLEFLRHIERTHVLIFMLDISGSHNEEPWKNFEILKNELLQYRSDFLDKPYIVVANKT 325 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 D ++ D+ R+ EL + G+ FE S+ G GI +++ Sbjct: 326 D-IEPDS-QRRIKELEQKVGKKVFEISAKHGLGIGEVI 361 >gi|229817140|ref|ZP_04447422.1| hypothetical protein BIFANG_02398 [Bifidobacterium angulatum DSM 20098] gi|229784929|gb|EEP21043.1| hypothetical protein BIFANG_02398 [Bifidobacterium angulatum DSM 20098] Length = 558 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/351 (37%), Positives = 200/351 (56%), Gaps = 21/351 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+++ GDGG G RREK+ GP+GG+GG GG V A+ N +L+D+R+ Sbjct: 4 FVDRVTVHVKGGDGGNGSAGIRREKYKPLAGPNGGNGGDGGSVIFVASRNATSLLDYRFM 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI--------SLICDLDQEGQR 114 H A G G+ N+ G+KG+D++L VP GT +F G + DL EG R Sbjct: 64 PHRVAPGGTMGLGDNKDGSKGDDLILPVPCGTVIFTARGPQGQPKHPGEQLADLRHEGDR 123 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 + A GG GG GN + T +AP +A G LG+E+ + L+LK IAD+ ++G P+AGKS+ Sbjct: 124 FVAAAGGAGGLGNIALANRTRRAPGFALLGELGEERDVILELKSIADVALVGFPSAGKSS 183 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +A+++ AKPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H Sbjct: 184 LIAAMSSAKPKIADYPFTTLVPNLGVVVAGDTRYTIADVPGLIPGASQGKGLGLEFLRHI 243 Query: 235 ERTHVLLHIV--SALEENVQ--AAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + LE + + Y+ + EL+ Y L ++ IV L++ Sbjct: 244 ERTEIIAHVIDCATLEPDRDPVSDYEALEKELAEYAGSLELPLGAIPIPERPRIVILNKA 303 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 D ++ LA + G F S+ + G+ ++ L + +RGE Sbjct: 304 DVPEAKELAEFVRPEFEKRGMKTFIISTASHEGLKELNFALAKMVDEMRGE 354 >gi|319760240|ref|YP_004124178.1| GTPase obgE/cgtA [Candidatus Blochmannia vafer str. BVAF] gi|318038954|gb|ADV33504.1| GTPase obgE/cgtA [Candidatus Blochmannia vafer str. BVAF] Length = 361 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 128/343 (37%), Positives = 192/343 (55%), Gaps = 24/343 (6%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFR---REKFIEFGGPDGGSGGRGGDVWIQATSNLNTLI 57 MKF+D + + +G GG G ISF R KF F P+G +GG GG+VW+ + SN+ TL Sbjct: 1 MKFVDVVNITVIAGTGGNGCISFIKIGRNKF--FRKPNGSNGGDGGNVWLLSDSNIKTLS 58 Query: 58 DFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDL--DQEGQRI 115 F + FKA +G G R RSG +G+D+++ VPVGT+V +L+ D+ + G + Sbjct: 59 YFSSHRIFKAGNGVSGRSRGRSGKRGKDMIIHVPVGTRVSCLKTNALLGDMINQKNGTLL 118 Query: 116 ILAPGGNGGFGN--------AHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGL 167 ++A GG G GN H+K+++N + G G+ + + L L L+AD+G+ GL Sbjct: 119 LVARGGRHGVGNNGVKFLRNKHYKNNSNILCWDRVQGRSGEIQHLLLDLFLVADVGVFGL 178 Query: 168 PNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK------EFILADIPGIIKNAH 221 PN+GKS+F++ V++AK K+ADYPFTTL P LG+V+ K F++ D+PGIIK A Sbjct: 179 PNSGKSSFVSMVSQAKSKVADYPFTTLTPKLGVVQVEDKSVVNNSSFVIEDVPGIIKGAS 238 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---ELSAYNSELRKKIEIVGL 278 G+G+G RFLKH +R +LLH V + + I+D EL AY+ L K + Sbjct: 239 TGSGLGLRFLKHLQRCQMLLHFVDINPADKSDPVKNIIDIEQELKAYDRRLIDKTRWLVF 298 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 ++ID +D L + N + ++ H I L C Sbjct: 299 NKIDLLDEFKLEDRINSIIRSVQWNSRYYAISVTHKINISLLC 341 >gi|293363211|ref|ZP_06610095.1| Obg family GTPase CgtA [Mycoplasma alligatoris A21JP2] gi|292553070|gb|EFF41819.1| Obg family GTPase CgtA [Mycoplasma alligatoris A21JP2] Length = 420 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 116/283 (40%), Positives = 177/283 (62%), Gaps = 4/283 (1%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D+ + +++G GG G ISFRRE ++ GGPDGG GG GG+++ NTL+ F Sbjct: 3 RFIDQINILVQAGKGGDGMISFRREAHVDKGGPDGGDGGNGGNIYFVGDLGKNTLLSFYK 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 +H A+ G KG +N GA + VP+GT V++ D L+CD+ + + ++A GG Sbjct: 63 NKHIIAEDGVKGGPKNLYGANAFHTYINVPIGTLVYKND--KLVCDVIEPNKPYLVAAGG 120 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN FK+S N AP G+ G++ + LK+++D+G +G P+AGKSTFL +++ Sbjct: 121 KGGRGNTKFKTSKNTAPRICENGMPGEKFEAKIVLKILSDVGAVGKPSAGKSTFLNAISN 180 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A K+A+Y FTTL P LG+VK F +AD+PG+IK A G G+G +FLKH ER V+ Sbjct: 181 ANAKVAEYEFTTLVPQLGMVKFFDNSFSVADLPGLIKGASLGKGLGIQFLKHIERCRVIA 240 Query: 242 HIVSALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQID 282 HIV +EN Y+ I +EL++Y+ +L +K ++V ++ D Sbjct: 241 HIVDFGDENKDPIKDYETINNELTSYDLKLEQKEQLVIANKSD 283 >gi|320531518|ref|ZP_08032471.1| Obg family GTPase CgtA [Actinomyces sp. oral taxon 171 str. F0337] gi|320136275|gb|EFW28270.1| Obg family GTPase CgtA [Actinomyces sp. oral taxon 171 str. F0337] Length = 535 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 125/307 (40%), Positives = 178/307 (57%), Gaps = 20/307 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ GDGG G S REKF GPDGG GG GGDV + + TL+ + Sbjct: 4 FIDRVVLHVAGGDGGNGCTSVHREKFKPLAGPDGGDGGHGGDVVLTVDPRVTTLLSYHRS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H +A +G GM R G G+D+VL VP GT V + G +I DL EG +++A GG Sbjct: 64 PHQRAGNGTPGMGDWRRGTDGKDLVLPVPEGTVVKDSRG-QVIADLVGEGTNVVVAEGGT 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN SS +AP + G GQ I L+LK IAD+ ++G P+AGKS+ +A+++ A Sbjct: 123 GGRGNFSLASSKRKAPGFHLLGEPGQAGDITLELKTIADVALVGYPSAGKSSLIAAMSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G + +AD+PG+I A QG G+G FL+H ER V++H Sbjct: 183 RPKIADYPFTTLVPNLGVVEAGDVRYTIADVPGLIPGASQGKGLGLDFLRHIERCAVIVH 242 Query: 243 IV--SALE--ENVQAAYQCILDELSAYNSE---------------LRKKIEIVGLSQIDT 283 ++ + LE + + I EL+AY+ L ++ IV L+++D Sbjct: 243 VLDCATLEPGRDPLSDLDTIEAELAAYSERLGEQEDDPALTGRVPLMERPRIVVLNKVDV 302 Query: 284 VDSDTLA 290 D+ LA Sbjct: 303 PDAAELA 309 >gi|325068509|ref|ZP_08127182.1| GTPase CgtA [Actinomyces oris K20] Length = 535 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 124/307 (40%), Positives = 179/307 (58%), Gaps = 20/307 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ GDGG G S REKF GPDGG GG GGDV + + TL+ + Sbjct: 4 FIDRVVLHVAGGDGGNGCTSVHREKFKPLAGPDGGDGGHGGDVVLTVAPRVTTLLSYHRS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H +A +G GM R G G+++VL VP GT V + G +I DL EG +++A GG Sbjct: 64 PHQRAGNGTPGMGDWRRGTDGKNLVLPVPEGTVVKDSRG-QVIADLVGEGASVVVAQGGT 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN SS +AP + G GQ + I L+LK IAD+ ++G P+AGKS+ +A+++ A Sbjct: 123 GGRGNFSLASSKRKAPGFHLLGEPGQAQDITLELKTIADVALVGYPSAGKSSLIAAMSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G + +AD+PG+I A QG G+G FL+H ER V++H Sbjct: 183 RPKIADYPFTTLVPNLGVVEAGDVRYTIADVPGLIPGASQGKGLGLDFLRHIERCAVIVH 242 Query: 243 IV--SALE--ENVQAAYQCILDELSAYNSE---------------LRKKIEIVGLSQIDT 283 ++ + LE + + I EL+AY+ L ++ IV L+++D Sbjct: 243 VLDCATLEPGRDPLSDLDTIEAELAAYSERLGEQEDDPSLTGRVPLMERPRIVVLNKVDV 302 Query: 284 VDSDTLA 290 D+ LA Sbjct: 303 PDAAELA 309 >gi|118618973|ref|YP_907305.1| GTPase ObgE [Mycobacterium ulcerans Agy99] gi|261277697|sp|A0PU15|OBG_MYCUA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|118571083|gb|ABL05834.1| GTP1/OBG-family GTP-binding protein Obg [Mycobacterium ulcerans Agy99] Length = 479 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 137/325 (42%), Positives = 192/325 (59%), Gaps = 18/325 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ R+G GG G S REKF GGPDGG+GGRGG V ++TL+DF + Sbjct: 3 RFVDRVVIHTRAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSVVFVVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H A G++GM NR GA G D+ + VP GT V +++G L+ DL G R A GG Sbjct: 63 RPHVTAASGKQGMGSNRDGAAGADLEVKVPDGTVVLDDNG-RLLADLVGAGTRFEAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G GQ + + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 RGGLGNAALASRARKAPGFALLGEPGQARDLTLELKTVADVGLVGFPSAGKSSLVSVISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A QG G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLVPNLGVVAAGGHSFTVADVPGLIPGASQGRGLGLDFLRHIERCAVLV 241 Query: 242 HIVS---------------ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 H+V+ ALE + AAYQ L + A +L ++ V L++ID ++ Sbjct: 242 HVVNCATAEPGRDPISDIDALEAEL-AAYQPTL-QGDAVLDDLAERPRAVVLNKIDVPEA 299 Query: 287 DTLARKKNELATQCGQVPFEFSSIT 311 LA + Q G F S++T Sbjct: 300 RELAEFVEDELAQRGWPVFLVSTVT 324 >gi|315657093|ref|ZP_07909977.1| GTP-binding protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492196|gb|EFU81803.1| GTP-binding protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 513 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 130/336 (38%), Positives = 194/336 (57%), Gaps = 20/336 (5%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F+D K++ ++G GG G S RREK+ GPDGG+GG GG V ++ TL+ F Sbjct: 2 VSFVDYVKIFAQAGTGGNGCASIRREKYKPLAGPDGGAGGHGGSVILRVNPQETTLLPFH 61 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ H KA++G+ GM R G +GED+ L VP GT V EDG + DLD ++++A G Sbjct: 62 HRPHVKAENGQAGMGDYRDGRRGEDLFLDVPQGTVVTSEDG-EFLADLDSPEAQLVIARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN S+ +AP +A G G+E+ + L+LK +AD+ ++G P+AGKS+ +A+++ Sbjct: 121 GVGGMGNYGLASAKRKAPGFALLGEPGEERTVILELKSMADVALVGYPSAGKSSLIAAMS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL PNL +V + +AD+PG+I A QG G+G FL+H ER V+ Sbjct: 181 AARPKIADYPFTTLVPNLAVVDNPAARYTVADVPGLIPGAAQGKGLGLDFLRHIERCCVI 240 Query: 241 LHIVSAL----EENVQAAYQCILDELSAYNSELRK-------------KIEIVGLSQIDT 283 H+V E A + + EL+ Y S L + + + L++ID Sbjct: 241 AHVVDLAAWDPEREPLADIKTLERELAHYASSLDRYRPGRDFLPPLMERQRAIILNKIDV 300 Query: 284 VD-SDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 D D A + ELA + G FE S+ T G+ ++ Sbjct: 301 PDGRDMAALMETELA-KLGWPVFEVSATTHEGLKEL 335 >gi|304389786|ref|ZP_07371745.1| GTP-binding protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326962|gb|EFL94201.1| GTP-binding protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 513 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 130/336 (38%), Positives = 194/336 (57%), Gaps = 20/336 (5%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F+D K++ ++G GG G S RREK+ GPDGG+GG GG V ++ TL+ F Sbjct: 2 VSFVDYVKIFAQAGTGGNGCASIRREKYKPLAGPDGGTGGHGGSVILRVNPQETTLLPFH 61 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ H KA++G+ GM R G +GED+ L VP GT V EDG + DLD ++++A G Sbjct: 62 HRPHVKAENGQAGMGDYRDGRRGEDLFLDVPQGTVVTSEDG-EFLADLDSPEAQLVIARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN S+ +AP +A G G+E+ + L+LK +AD+ ++G P+AGKS+ +A+++ Sbjct: 121 GVGGMGNYGLASAKRKAPGFALLGEPGEERTVILELKSMADVALVGYPSAGKSSLIAAMS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL PNL +V + +AD+PG+I A QG G+G FL+H ER V+ Sbjct: 181 AARPKIADYPFTTLVPNLAVVDNPAARYTVADVPGLIPGAAQGKGLGLDFLRHIERCCVI 240 Query: 241 LHIVSAL----EENVQAAYQCILDELSAYNSELRK-------------KIEIVGLSQIDT 283 H+V E A + + EL+ Y S L + + + L++ID Sbjct: 241 AHVVDLAAWDPEREPLADIKTLERELAHYASSLDRYRPGRDFLPPLMERQRAIILNKIDV 300 Query: 284 VD-SDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 D D A + ELA + G FE S+ T G+ ++ Sbjct: 301 PDGRDMAALMETELA-KLGWPVFEVSATTHEGLKEL 335 >gi|298346475|ref|YP_003719162.1| spo0B-associated GTP-binding protein [Mobiluncus curtisii ATCC 43063] gi|298236536|gb|ADI67668.1| spo0B-associated GTP-binding protein [Mobiluncus curtisii ATCC 43063] Length = 513 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 130/336 (38%), Positives = 194/336 (57%), Gaps = 20/336 (5%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F+D K++ ++G GG G S RREK+ GPDGG+GG GG V ++ TL+ F Sbjct: 2 VSFVDYVKIFAQAGTGGNGCASIRREKYKPLAGPDGGAGGHGGSVILRVNPQETTLLPFH 61 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ H KA++G+ GM R G +GED+ L VP GT V EDG + DLD ++++A G Sbjct: 62 HRPHVKAENGQAGMGDYRDGRRGEDLFLDVPQGTVVTSEDG-EFLADLDSPEAQLVIARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN S+ +AP +A G G+E+ + L+LK +AD+ ++G P+AGKS+ +A+++ Sbjct: 121 GVGGMGNYGLASAKRKAPGFALLGEPGEERTVILELKSMADVALVGYPSAGKSSLIAAMS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL PNL +V + +AD+PG+I A QG G+G FL+H ER V+ Sbjct: 181 AARPKIADYPFTTLVPNLAVVDNPAARYTVADVPGLIPGAAQGKGLGLDFLRHIERCCVI 240 Query: 241 LHIVSAL----EENVQAAYQCILDELSAYNSELRK-------------KIEIVGLSQIDT 283 H+V E A + + EL+ Y S L + + + L++ID Sbjct: 241 AHVVDLAAWDPEREPLADIKTLERELAHYASSLDRYRPGRDFLPPLMERQRAIILNKIDV 300 Query: 284 VD-SDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 D D A + ELA + G FE S+ T G+ ++ Sbjct: 301 PDGRDMAALMETELA-KLGWPVFEVSATTHEGLKEL 335 >gi|154486655|ref|ZP_02028062.1| hypothetical protein BIFADO_00474 [Bifidobacterium adolescentis L2-32] gi|154084518|gb|EDN83563.1| hypothetical protein BIFADO_00474 [Bifidobacterium adolescentis L2-32] Length = 563 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 134/351 (38%), Positives = 207/351 (58%), Gaps = 21/351 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+++ GDGG G RREK+ GP+GG+GG GG V A SN N+L+D+R+ Sbjct: 4 FVDRVTVHVKGGDGGNGSAGIRREKYKPLAGPNGGNGGDGGSVIFMADSNANSLLDYRFM 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI--------SLICDLDQEGQR 114 H +A+ G G+ + G+KG D++L VPVGT VFE G + DL G + Sbjct: 64 PHREAESGTMGLGDTKDGSKGADLILPVPVGTVVFEAKGPQGKPKHPGEQLADLRHAGDK 123 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 ++A GGNGG GNA + T +AP +A G G+E+ + L+LK IAD+ ++G P+AGKS+ Sbjct: 124 FVVAAGGNGGLGNAALANRTRRAPGFALLGEPGEERDVILELKSIADVALVGFPSAGKSS 183 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +A+++ AKPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H Sbjct: 184 LIAAMSSAKPKIADYPFTTLVPNLGVVVAGDMRYTIADVPGLIPGASQGKGLGLEFLRHI 243 Query: 235 ERTHVLLHIV--SALE--ENVQAAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + LE + + YQ + EL+ Y +L ++ I+ L+++ Sbjct: 244 ERTEIIAHVIDCATLEPGRDPMSDYQALEHELAEYAGKLELPLGAIPIPERPRIIILNKV 303 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 D ++ LA + G + S+ + G+ ++ L D + ++R E Sbjct: 304 DVPEAKELAEFVKPEFEKLGLKVYIISTASHEGLKELNWALADLVTNMRAE 354 >gi|291302924|ref|YP_003514202.1| GTP-binding protein Obg/CgtA [Stackebrandtia nassauensis DSM 44728] gi|290572144|gb|ADD45109.1| GTP-binding protein Obg/CgtA [Stackebrandtia nassauensis DSM 44728] Length = 480 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 135/333 (40%), Positives = 197/333 (59%), Gaps = 6/333 (1%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 F+D +++++G GG G +S REKF FGGPDGG+GG GGDV ++ N++TL+DF + Sbjct: 3 SFVDRVVLHVQAGTGGHGCVSIHREKFKPFGGPDGGNGGHGGDVVLEVDPNVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H KA +G+ G NR+GA G+ + L VP GT V DG +I DL G I+LA GG Sbjct: 63 HPHAKAGNGKGGQGSNRNGAFGKSLHLKVPDGTVVQSADG-EVIADLTGVGTSIVLARGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA ++ +AP +A G G+ L+LK +AD+G++G P+AGKS+ +A+++ Sbjct: 122 RGGRGNAALANAARKAPGFAELGEEGEALDAVLELKSVADVGLVGFPSAGKSSLIAALSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A+PKIADYPFTTL PNLG+V G F +AD+PG+I A G G+G FL+H ER VL Sbjct: 182 ARPKIADYPFTTLVPNLGVVSAGETTFTIADVPGLIPGAAHGKGLGLEFLRHIERCAVLA 241 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 H+V + LE + + + EL+ Y L + IV L++ID ++ LA Sbjct: 242 HVVDCATLEPGRDPLSDIDALEHELAEYGG-LTDRPRIVVLNKIDVPEAAELAELVRADV 300 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G +E S++ G+ + L + + R Sbjct: 301 ETRGWPVYEVSAVARKGLSTLTYALAAAVTAHR 333 >gi|50365339|ref|YP_053764.1| GTPase ObgE [Mesoplasma florum L1] gi|81827282|sp|Q6F0U3|OBG_MESFL RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|50363895|gb|AAT75880.1| conserved GTPase [Mesoplasma florum L1] Length = 432 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 122/289 (42%), Positives = 190/289 (65%), Gaps = 7/289 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+D AK I++G+GG G +SF F+ GGP+GG GG GG V +A ++L+D + Sbjct: 1 MKFIDTAKFTIKAGNGGNGAVSFHTALFVPNGGPNGGDGGNGGSVIFEADGGKHSLLDLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ AQ G KG +N GA+G+D+++ VPVGT + E +++ D+D++ +++++A G Sbjct: 61 LQKQLSAQDGFKGDIKNMHGAQGKDLIVRVPVGTLIIENKTGTILADMDEDKKQVLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA F +S N+AP G +GQ + +LK++AD+G +GLPNAGKST L +++ Sbjct: 121 GKGGKGNARFANSRNKAPTIFEAGEIGQFYEVKAELKVLADVGFVGLPNAGKSTLLRAIS 180 Query: 181 RAKPKIADYPFTTLYPNLGI--VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 +KP++ADY FTTL P LG+ K+G F++AD+PG+I+ A G G+G +FLKH ER Sbjct: 181 NSKPEVADYAFTTLNPQLGVSRAKDG-STFVVADLPGLIEGASLGKGLGHQFLKHIERCR 239 Query: 239 VLLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT 283 V+ H++ +E+V Y+ I EL YN +L ++ EI+ +++DT Sbjct: 240 VICHVLDMSGNYGQEDVIKNYELIRSELVKYNYKLDERPEIIVANKMDT 288 >gi|326773625|ref|ZP_08232908.1| GTP-binding protein [Actinomyces viscosus C505] gi|326636855|gb|EGE37758.1| GTP-binding protein [Actinomyces viscosus C505] Length = 535 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 124/307 (40%), Positives = 179/307 (58%), Gaps = 20/307 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ GDGG G S REKF GPDGG GG GGDV + + TL+ + Sbjct: 4 FIDRVVLHVAGGDGGNGCTSVHREKFKPLAGPDGGDGGHGGDVVLTVDPRVTTLLSYHRS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H +A +G GM R G G+++VL VP GT V + G +I DL EG +++A GG Sbjct: 64 PHQRAGNGTPGMGDWRRGTDGKNLVLPVPEGTVVKDSRG-QVIADLVGEGTSVVVAQGGT 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN SS +AP + G GQ + I L+LK IAD+ ++G P+AGKS+ +A+++ A Sbjct: 123 GGRGNFSLASSKRKAPGFHLLGEPGQAQDITLELKTIADVALVGYPSAGKSSLIAAMSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G + +AD+PG+I A QG G+G FL+H ER V++H Sbjct: 183 RPKIADYPFTTLVPNLGVVEAGDVRYTIADVPGLIPGASQGKGLGLDFLRHIERCAVIVH 242 Query: 243 IV--SALE--ENVQAAYQCILDELSAYNSE---------------LRKKIEIVGLSQIDT 283 ++ + LE + + I EL+AY+ L ++ IV L+++D Sbjct: 243 VLDCATLEPGRDPLSDLDTIEAELAAYSERLGEQEDDPSLTGRVPLMERPRIVVLNKVDV 302 Query: 284 VDSDTLA 290 D+ LA Sbjct: 303 PDAAELA 309 >gi|323450929|gb|EGB06808.1| hypothetical protein AURANDRAFT_11871 [Aureococcus anophagefferens] Length = 313 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 137/301 (45%), Positives = 180/301 (59%), Gaps = 10/301 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F DEA++ + GDGG G +SFRREK+I FGGP GG+GGRGG V + LNTL R Sbjct: 1 FWDEARLEVWGGDGGDGCLSFRREKYIPFGGPSGGNGGRGGSVILVCDGGLNTLGVARRH 60 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLIC-DLDQEGQRIILAPGG 121 +A+ G KG + DV + VP GT V E + +L + G +++A GG Sbjct: 61 SLRRAKSGAKGQGSTKHAQARPDVYVRVPPGTVVREHAPPYRVAGELREPGDALLVARGG 120 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA FK+ AP A G G ++ L L+L+AD G++GLPNAGKST LA+ T Sbjct: 121 RGGRGNAAFKTPRMTAPRIAERGEQGARHVLSLSLQLVADCGLVGLPNAGKSTLLAAATA 180 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A+PKIADY FTTL PNLG +LAD+PG+I+NA GAG+GD FL+H ER L+ Sbjct: 181 ARPKIADYAFTTLVPNLG---------VLADVPGLIENASDGAGMGDAFLRHVERCAALV 231 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 H+V A E+ A Y I EL AY+ L +K +V L+++D +D +T AR L CG Sbjct: 232 HVVDATAEDPVADYGVIDRELRAYSRILAEKPRVVLLNKVDALDEETEARLVAALRAACG 291 Query: 302 Q 302 Sbjct: 292 H 292 >gi|312140342|ref|YP_004007678.1| gtpase [Rhodococcus equi 103S] gi|325677082|ref|ZP_08156751.1| Spo0B-associated GTP-binding protein [Rhodococcus equi ATCC 33707] gi|311889681|emb|CBH48998.1| putative GTPase [Rhodococcus equi 103S] gi|325552067|gb|EGD21760.1| Spo0B-associated GTP-binding protein [Rhodococcus equi ATCC 33707] Length = 486 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 134/342 (39%), Positives = 196/342 (57%), Gaps = 14/342 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +++ +G GG G S REKF GGPDGG+GGRGGDV ++ N++TL+DF + Sbjct: 3 RFIDRVVLHVSAGKGGNGCASVHREKFKPLGGPDGGNGGRGGDVVLEVDRNVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 KA +G +GM NR GA G D++L VP GT V ++DG ++ DL G R + A GG Sbjct: 63 HPRAKATNGTQGMGGNREGANGSDLILKVPDGTVVVDKDG-EVLADLVGIGTRFVAARGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+ + L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 RGGLGNASLASKARKAPGFALLGEDGESGDLILELKSVADVGLVGFPSAGKSSLVSVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKI DYPFTTL PNLG+V G F +AD+PG+I A +G G+G FL+H ER VL Sbjct: 182 AKPKIGDYPFTTLQPNLGVVSSGDTTFTVADVPGLIPGASEGRGLGLDFLRHLERCAVLA 241 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNSELR---------KKIEIVGLSQIDTVDSDT 288 H+V + LE + + + EL+AY L+ + IV L++ D ++ Sbjct: 242 HVVDCATLEPGRDPISDVDALETELAAYQPALKGDAGLGDLADRPRIVILNKADVPEAAE 301 Query: 289 LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 LA G F S+++ G+ + L + R Sbjct: 302 LAEMVTPDFEARGWPVFTISAVSREGLRPLTFALAKMVAEYR 343 >gi|149197034|ref|ZP_01874087.1| GTP-binding protein [Lentisphaera araneosa HTCC2155] gi|149140144|gb|EDM28544.1| GTP-binding protein [Lentisphaera araneosa HTCC2155] Length = 391 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 118/330 (35%), Positives = 188/330 (56%), Gaps = 2/330 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D KVY+++G+GG G ISFRREK++ GGP+GG+GG GG V A ++L+D ++ Sbjct: 2 FVDRIKVYVKAGNGGNGCISFRREKYVPKGGPNGGNGGDGGSVIFVADPGTSSLVDLKFN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISL-ICDLDQEGQRIILAPGG 121 QH A+HG G+ + G +GED+ + VP GT V + + + ICDLD+ I++A GG Sbjct: 62 QHIDAEHGGHGLGSDMHGNRGEDLYVKVPPGTVVMDINNDNYQICDLDEPESEIVIAQGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN F +S N+ P A G G+E ++ L+LK IAD+G++G PNAGKSTFL SV+ Sbjct: 122 KGGRGNRSFATSINRVPRQAEEGYPGEELVLLLELKTIADVGLVGYPNAGKSTFLNSVSN 181 Query: 182 AKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 + K A YPFTTL P +G + + +ADIPG+++ AH+ G+G FL+H ERT+ L Sbjct: 182 SGAKTASYPFTTLNPIVGTIDFPDFTRITIADIPGLVEGAHENIGLGHHFLRHIERTNNL 241 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 ++++ + + ++ + + + +D+ L + Sbjct: 242 VYVLDMNGTDGRDPLDDLVKLKEELELYEEGLSDRACMILANKMDNPASEENLERLRKET 301 Query: 301 GQVPFEFSSITGHGIPQILECLHDKIFSIR 330 F + G+ ++LE LH ++ ++ Sbjct: 302 DLTIFPVIAELRDGVDEVLEFLHKRVMELK 331 >gi|326428575|gb|EGD74145.1| GTP-binding protein Obg [Salpingoeca sp. ATCC 50818] Length = 405 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 120/342 (35%), Positives = 192/342 (56%), Gaps = 43/342 (12%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A++++ G GG G G +GG GG+V++QA ++++ L D + Sbjct: 46 FVDRARIFVVGGTGGQGHKRM------------GSAGGDGGNVFVQADASIHNLRDIAQK 93 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 FKA G+ G K+ +S GEDVV+ VPVGT ++ + G + DL + +++A GG Sbjct: 94 HRFKAGPGDPGSKKYKS-VPGEDVVVKVPVGTSIYLDSGRPM-GDLTFHAETLLVARGGE 151 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG + TNQ Y+ G+ G I L+LK IAD+G++G PNAGKS+ L +++RA Sbjct: 152 GG------SALTNQ--NYS--GLKGDRLHIVLELKSIADVGLVGFPNAGKSSLLGALSRA 201 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP++A+YPFTTL PN+G+++ + + + +ADIPG+I+ AH+ G+G FL+H ERT VLL Sbjct: 202 KPRVANYPFTTLRPNIGVLQYDDFSQLRMADIPGLIEGAHENRGMGHAFLRHIERTKVLL 261 Query: 242 HIVSA------LEENVQAAYQC---ILDELSAYNSELRKKI-EIVGLSQIDTVDSDTLAR 291 +++ + + A Q + EL Y+ LR+ IV L+++D D + Sbjct: 262 YVIDVNGFQLGPDHPYRTATQTLALLAAELDHYDPNLRRSCPAIVALNKMDLPDVEA--- 318 Query: 292 KKNELATQCGQV-----PFEFSSITGHGIPQILECLHDKIFS 328 K +E C Q+ S+ TG G+P + + D + S Sbjct: 319 KADEFCNACKQILPNTHVHRISTQTGEGLPDLAIAVKDTVES 360 >gi|315655045|ref|ZP_07907949.1| GTP-binding protein [Mobiluncus curtisii ATCC 51333] gi|315490701|gb|EFU80322.1| GTP-binding protein [Mobiluncus curtisii ATCC 51333] Length = 513 Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 130/336 (38%), Positives = 194/336 (57%), Gaps = 20/336 (5%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F+D K++ ++G GG G S RREK+ GPDGG+GG GG V ++ TL+ F Sbjct: 2 VSFVDYVKIFAQAGTGGNGCASIRREKYKPLAGPDGGAGGHGGSVILRVNPQETTLLPFH 61 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ H KA++G+ GM R G +GED+ L VP GT V EDG + DLD ++++A G Sbjct: 62 HRPHVKAENGQAGMGDYRDGRRGEDLFLDVPQGTVVTSEDG-EFLADLDSPEAQLVIARG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN S+ +AP +A G G+E+ + L+LK +AD+ ++G P+AGKS+ +A+++ Sbjct: 121 GVGGMGNYGLASAKRKAPGFALLGEPGEERAVILELKSMADVALVGYPSAGKSSLIAAMS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIADYPFTTL PNL +V + +AD+PG+I A QG G+G FL+H ER V+ Sbjct: 181 AARPKIADYPFTTLVPNLAVVDNLAARYTVADVPGLIPGAAQGKGLGLDFLRHIERCCVI 240 Query: 241 LHIVSAL----EENVQAAYQCILDELSAYNSELRK-------------KIEIVGLSQIDT 283 H+V E A + + EL+ Y S L + + + L++ID Sbjct: 241 AHVVDLAAWDPEREPLADIKTLERELAHYASSLDRYRPGRDFLPPLMERQRAIILNKIDV 300 Query: 284 VD-SDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 D D A + ELA + G FE S+ T G+ ++ Sbjct: 301 PDGRDMAALMETELA-KLGWPVFEVSATTHEGLKEL 335 >gi|238060595|ref|ZP_04605304.1| GTPase obgE [Micromonospora sp. ATCC 39149] gi|237882406|gb|EEP71234.1| GTPase obgE [Micromonospora sp. ATCC 39149] Length = 490 Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 128/332 (38%), Positives = 192/332 (57%), Gaps = 6/332 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++++GDGG G +S REKF FGGPDGG+GG GG V + ++TL+DF + Sbjct: 2 FVDRVVLHLQAGDGGHGCVSIHREKFKPFGGPDGGNGGHGGSVTLVVDPQVHTLLDFHFH 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H K ++G+ G NR GA G +VL VP GT V + G ++ D+ G +A GG Sbjct: 62 PHVKGENGKGGAGSNRDGANGRGLVLKVPDGT-VVQTLGGEVLADMVGAGTTFEVARGGR 120 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA ++ +AP +A G G++ + L+LK +AD+G++G P+AGKS+ ++ ++ A Sbjct: 121 GGRGNASLANARRKAPGFAELGEPGEQLDVVLELKSVADVGLVGFPSAGKSSLISVISAA 180 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V+ F +AD+PG+I A G G+G FL+H ER VL+H Sbjct: 181 KPKIADYPFTTLVPNLGVVRVDNHTFTVADVPGLIPGAATGKGLGLEFLRHIERCAVLVH 240 Query: 243 IVSALE----ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + A I EL+ Y L + +V L++ID D LA Sbjct: 241 VIDTATLDPGRDPLADIDAIESELNQYGG-LADRPRLVALNKIDVPDGRDLAEIVRPDLE 299 Query: 299 QCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 G +E S+ T G+ +++ L + + R Sbjct: 300 ARGLRVYEVSAATREGLKELMFALAELVEKAR 331 >gi|296270422|ref|YP_003653054.1| GTP-binding protein Obg/CgtA [Thermobispora bispora DSM 43833] gi|296093209|gb|ADG89161.1| GTP-binding protein Obg/CgtA [Thermobispora bispora DSM 43833] Length = 450 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 129/318 (40%), Positives = 197/318 (61%), Gaps = 5/318 (1%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D VY+++GDGG G S REK+ FGGPDGG+GGRGGDV + ++ +TL+D+ Sbjct: 3 EFVDRVVVYVKAGDGGNGCASIHREKYRPFGGPDGGNGGRGGDVIFEVDASTSTLLDYHR 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H +A +G GM ++ GA+GED+VL VP GT V + ++ DL G R + A GG Sbjct: 63 RPHRRAGNGRPGMGSHKDGARGEDLVLPVPNGTVVKDAKTGEVLVDLVGIGTRYVAARGG 122 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA +AP +A G G+E + L+LK +AD+ ++G PNAGKS+ +AS++ Sbjct: 123 AGGLGNAALAGPKRKAPGFALLGEPGEEAELLLELKTVADVALVGFPNAGKSSLIASLSA 182 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A+PKIADYPFTTL PNLG+V G F +AD+PG+I A QG G+G FL+H ER ++ Sbjct: 183 ARPKIADYPFTTLVPNLGVVTAGESVFTVADVPGLIPGASQGKGLGHDFLRHIERCSTIV 242 Query: 242 HIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 H++ + + + ++ I EL+AY L+ + +V L+++D ++ LA + Sbjct: 243 HVLDCATMEPDRDPVSDFEVIEAELAAYG-RLQDRPRMVVLNKVDVPEARELAEFVRPMF 301 Query: 298 TQCGQVPFEFSSITGHGI 315 + G F S+++ G+ Sbjct: 302 EERGLRVFAVSAVSREGL 319 >gi|119025260|ref|YP_909105.1| GTPase ObgE [Bifidobacterium adolescentis ATCC 15703] gi|261266677|sp|A0ZZZ0|OBG_BIFAA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|118764844|dbj|BAF39023.1| GTP-binding protein [Bifidobacterium adolescentis ATCC 15703] Length = 563 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 134/351 (38%), Positives = 206/351 (58%), Gaps = 21/351 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+++ GDGG G RREK+ GP+GG+GG GG V A SN N+L+D+R+ Sbjct: 4 FVDRVTVHVKGGDGGNGSAGIRREKYKPLAGPNGGNGGDGGSVIFMADSNANSLLDYRFM 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI--------SLICDLDQEGQR 114 H +A+ G G+ + G+KG D++L VPVGT VFE G + DL G + Sbjct: 64 PHREAESGTMGLGDTKDGSKGADLILPVPVGTVVFEAKGPQGKPKHPGEQLADLRHAGDK 123 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 ++A GGNGG GNA + T +AP +A G G+E+ + L+LK IAD+ ++G P+AGKS+ Sbjct: 124 FVVAAGGNGGLGNAALANRTRRAPGFALLGEPGEERDVILELKSIADVALVGFPSAGKSS 183 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +A+++ AKPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H Sbjct: 184 LIAAMSSAKPKIADYPFTTLVPNLGVVVAGDMRYTIADVPGLIPGASQGKGLGLEFLRHI 243 Query: 235 ERTHVLLHIV--SALE--ENVQAAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + LE + + YQ + EL+ Y +L ++ I+ L+++ Sbjct: 244 ERTEIIAHVIDCATLEPGRDPMSDYQALEHELAEYAGKLELPLGAIPIPERPRIIILNKV 303 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 D ++ LA + G S+ + G+ ++ L D + ++R E Sbjct: 304 DVPEAKELAEFVKPEFEKLGLKVHIISTASHEGLKELNWALADLVTNMRAE 354 >gi|289641531|ref|ZP_06473693.1| GTP-binding protein Obg/CgtA [Frankia symbiont of Datisca glomerata] gi|289508626|gb|EFD29563.1| GTP-binding protein Obg/CgtA [Frankia symbiont of Datisca glomerata] Length = 522 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 134/334 (40%), Positives = 196/334 (58%), Gaps = 6/334 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ +GDGG G S REKF GGPDGG+GGRGGDV ++ ++ TL+DF + Sbjct: 4 FVDRVILHVTAGDGGHGCASVHREKFKPLGGPDGGNGGRGGDVIVRVDPDVTTLLDFHFH 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H +A G G NR GA G D+VL VP GT V DG I DL G +++A GG Sbjct: 64 PHQRASGGRPGQGSNRHGADGADLVLPVPDGTVVLRPDG-EQIADLVGAGSSVVVARGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G++ L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGRGNAALASTRRKAPGFAELGEPGEQLDAVLELKTVADVALVGFPSAGKSSLVSVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIADYPFTTL PNLG+V+ G + +AD+PG+I A G G+G FL+H ER +++ Sbjct: 183 RPKIADYPFTTLVPNLGVVQAGDNAPYTVADVPGLIPGASTGRGLGLEFLRHIERCSLIV 242 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 H++ + LE + I EL+AY+++L + V L++ID D+ LA Sbjct: 243 HVLDCATLEPGRDPLTDLDVIEAELAAYSTDLSDRPRAVVLNKIDVPDARELAELVTSEI 302 Query: 298 TQCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 T G F SS T G+ + L +++ R Sbjct: 303 TARGLDVFAVSSATREGVRALSLALAERVAEHRA 336 >gi|145223224|ref|YP_001133902.1| GTPase ObgE [Mycobacterium gilvum PYR-GCK] gi|261266892|sp|A4T2J4|OBG_MYCGI RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|145215710|gb|ABP45114.1| GTP1/OBG sub domain protein [Mycobacterium gilvum PYR-GCK] Length = 482 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 134/339 (39%), Positives = 201/339 (59%), Gaps = 15/339 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D V+ R+G+GG G S REKF GGPDGG+GGRGG V ++TL+DF + Sbjct: 3 RFIDRVVVHARAGNGGNGCASVHREKFKPLGGPDGGNGGRGGSVVFVVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H A G++G NR GA G D+ + VP GT V +E G ++ DL G R A GG Sbjct: 63 HPHVVAPSGKQGAGSNRDGAAGADLEVKVPDGTVVLDERG-QILADLIGAGTRFEAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+ + + L+LK +AD+G++G P+AGKS+ +++++ Sbjct: 122 RGGLGNAALASRARKAPGFALLGEQGEVRELTLELKTVADVGLVGFPSAGKSSLVSTISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A +G G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLAPNLGVVSAGEHTFTVADVPGLIPGASEGRGLGLDFLRHIERCAVLV 241 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNS---------ELRKKIEIVGLSQIDTVDSDT 288 H+V + LE + + + + E++AY +L ++ V L++ID ++ Sbjct: 242 HVVDCATLEPGRDPISDIEALEAEIAAYTPTLQGDSTLGDLAERPRAVVLNKIDVPEARE 301 Query: 289 LAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 LA + ++ T+ G FE S++ G+ ++ L D + Sbjct: 302 LADFVREDVETRFGWPVFEISTVAREGLRPLIFALWDMV 340 >gi|306818168|ref|ZP_07451899.1| GTP-binding protein [Mobiluncus mulieris ATCC 35239] gi|307701722|ref|ZP_07638736.1| Obg family GTPase CgtA [Mobiluncus mulieris FB024-16] gi|304649132|gb|EFM46426.1| GTP-binding protein [Mobiluncus mulieris ATCC 35239] gi|307612980|gb|EFN92235.1| Obg family GTPase CgtA [Mobiluncus mulieris FB024-16] Length = 535 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 127/334 (38%), Positives = 187/334 (55%), Gaps = 20/334 (5%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F+D K++ +G GG G S RREK+ GPDGG+GG GG + ++ + TL++F Sbjct: 24 VSFVDYVKIFATAGAGGNGCASIRREKYKPLAGPDGGAGGHGGSIILRVDPQVTTLLEFH 83 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ H A++G G R G +GED+VL VP+GT V E G L+ DL LA G Sbjct: 84 HRPHVSAENGSAGAGDYRDGKRGEDLVLPVPLGTVVTSETG-ELLADLGTPEAEYTLARG 142 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN S+ +AP +A G G+E+ + L+LK +AD+ ++G P+AGKS+ +A+++ Sbjct: 143 GVGGLGNWGLASAKRKAPGFALLGEPGEERTVILELKSVADVALVGFPSAGKSSLVAALS 202 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNL +V F +AD+PG+I A QG G+G FL+H ER VL Sbjct: 203 AAKPKIADYPFTTLVPNLAVVDSPVTRFTMADVPGLIPGAAQGKGLGLDFLRHIERCCVL 262 Query: 241 LHIVSAL----EENVQAAYQCILDELSAYNSELRK---------------KIEIVGLSQI 281 H+V E + + + + EL+AY S+L + + + L++I Sbjct: 263 AHVVDLAAWEPERDPLSDIRALESELAAYASDLDRFGQVSAAGSLPPLMERRRAIILNKI 322 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 D D +A + G FE S+ T G+ Sbjct: 323 DVPDGREMAEVMRADLGRLGWPIFEVSAATHEGL 356 >gi|320093910|ref|ZP_08025749.1| Spo0B-associated GTP-binding protein [Actinomyces sp. oral taxon 178 str. F0338] gi|319979179|gb|EFW10683.1| Spo0B-associated GTP-binding protein [Actinomyces sp. oral taxon 178 str. F0338] Length = 510 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 117/310 (37%), Positives = 173/310 (55%), Gaps = 20/310 (6%) Query: 22 SFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGA 81 S +REKF GPDGG GG GG V ++ + TL+ + H +AQ+G +GM R G Sbjct: 23 SIKREKFKPLAGPDGGDGGDGGSVVLEVSDQETTLLTYHRSPHQRAQNGTQGMGDFRQGK 82 Query: 82 KGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYA 141 G D+VL VP GT V G L+ DL G R ++A GG GG GNA S +AP +A Sbjct: 83 NGADIVLPVPDGTVVKSTSG-ELLADLTGAGARFVVAQGGRGGLGNAALASKARKAPGFA 141 Query: 142 NPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV 201 G G+E+ + L+LK +AD ++G P++GKS+ +A+++ A+PKIADYPFTTL PNLG+V Sbjct: 142 LLGEPGEERDVVLELKSVADAALVGFPSSGKSSLIAAMSSARPKIADYPFTTLVPNLGVV 201 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDE 261 G + +AD+PG+I A G G+G FL+H ER V++H+ L+ V A + +D+ Sbjct: 202 AAGDVRYTMADVPGLIPGASAGKGLGLDFLRHIERCAVIVHV---LDTAVYEAERTPVDD 258 Query: 262 LSAYNSE----------------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 L +E L ++ ++ L+++D D LA G F Sbjct: 259 LRTIEAELGAYQGDLGGLEGHVPLMERPRVIVLNKVDVPDGRDLAEIVRPELEATGWPVF 318 Query: 306 EFSSITGHGI 315 E S+++ G+ Sbjct: 319 EVSAVSHEGL 328 >gi|283783661|ref|YP_003374415.1| Obg family GTPase CgtA [Gardnerella vaginalis 409-05] gi|283441969|gb|ADB14435.1| Obg family GTPase CgtA [Gardnerella vaginalis 409-05] Length = 560 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 130/337 (38%), Positives = 200/337 (59%), Gaps = 21/337 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+++ GDGG G RREK+ GP+GG+GG GG V A N N+L+D+R+ Sbjct: 4 FVDRVTVHVKGGDGGNGSAGVRREKYKPLAGPNGGNGGDGGSVIFVADRNANSLLDYRFM 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGIS--------LICDLDQEGQR 114 H A++G G+ + G+KG D+VL VPVGT VF G++ ++ DL G + Sbjct: 64 PHRTAENGTMGLGDTKDGSKGADLVLPVPVGTVVFTARGVAGSQKRPGEVLADLQHVGDK 123 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 ++A GG GG GNA + T +AP +A G G+E+ + L+LK IAD+ ++G P+AGKS+ Sbjct: 124 FVVAQGGAGGLGNAALANKTRRAPGFALLGEPGEERDVILELKSIADVALVGFPSAGKSS 183 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +AS++ AKPKIADYPFTTL PNLG+V G + +AD+PG+I A +G G+G FL+H Sbjct: 184 LVASISAAKPKIADYPFTTLVPNLGVVSFGNYRYTIADVPGLIPGASEGKGLGLEFLRHI 243 Query: 235 ERTHVLLHIV--SALEENVQ--AAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + LE N + Y + EL+ Y +L ++ I+ L+++ Sbjct: 244 ERTEIIAHVIDCATLEPNRDPISDYHALEHELAQYADKLELPLGAIPIPERPRIIVLNKV 303 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 D ++ LA + G FE S+ + G+ ++ Sbjct: 304 DVPEAKELADFVRGEFEKMGLTVFEISTASHEGLKEL 340 >gi|315443682|ref|YP_004076561.1| GTP-binding protein Obg/CgtA [Mycobacterium sp. Spyr1] gi|315261985|gb|ADT98726.1| GTP-binding protein Obg/CgtA [Mycobacterium sp. Spyr1] Length = 482 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 134/339 (39%), Positives = 201/339 (59%), Gaps = 15/339 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D V+ R+G+GG G S REKF GGPDGG+GGRGG V ++TL+DF + Sbjct: 3 RFIDRVVVHARAGNGGNGCASVHREKFKPLGGPDGGNGGRGGSVVFVVDLQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H A G++G NR GA G D+ + VP GT V +E G ++ DL G R A GG Sbjct: 63 HPHVVAPSGKQGAGSNRDGAAGADLEVKVPDGTVVLDERG-QILADLIGAGTRFEAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+ + + L+LK +AD+G++G P+AGKS+ +++++ Sbjct: 122 RGGLGNAALASRARKAPGFALLGEQGEVRELTLELKTVADVGLVGFPSAGKSSLVSTISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A +G G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLAPNLGVVSAGEHTFTVADVPGLIPGASEGRGLGLDFLRHIERCAVLV 241 Query: 242 HIV--SALE--ENVQAAYQCILDELSAYNS---------ELRKKIEIVGLSQIDTVDSDT 288 H+V + LE + + + + E++AY +L ++ V L++ID ++ Sbjct: 242 HVVDCATLEPGRDPISDIEALEAEIAAYTPTLQGDSTLGDLAERPRAVVLNKIDVPEARE 301 Query: 289 LAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 LA + ++ T+ G FE S++ G+ ++ L D + Sbjct: 302 LADFVREDVETRFGWPVFEISTVAREGLRPLIFALWDMV 340 >gi|269976523|ref|ZP_06183508.1| Spo0B-associated GTP-binding protein [Mobiluncus mulieris 28-1] gi|269935324|gb|EEZ91873.1| Spo0B-associated GTP-binding protein [Mobiluncus mulieris 28-1] Length = 535 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 127/334 (38%), Positives = 187/334 (55%), Gaps = 20/334 (5%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F+D K++ +G GG G S RREK+ GPDGG+GG GG + ++ + TL++F Sbjct: 24 VSFVDYVKIFATAGAGGNGCASIRREKYKPLAGPDGGAGGHGGSIILRVDPQVTTLLEFH 83 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ H A++G G R G +GED+VL VP+GT V E G L+ DL LA G Sbjct: 84 HRPHVSAENGLAGAGDYRDGKRGEDLVLPVPLGTVVTSETG-ELLADLGTPEAEYTLARG 142 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN S+ +AP +A G G+E+ + L+LK +AD+ ++G P+AGKS+ +A+++ Sbjct: 143 GVGGLGNWGLASAKRKAPGFALLGEPGEERTVILELKSVADVALVGFPSAGKSSLVAALS 202 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNL +V F +AD+PG+I A QG G+G FL+H ER VL Sbjct: 203 AAKPKIADYPFTTLVPNLAVVDSPVTRFTMADVPGLIPGAAQGKGLGLDFLRHIERCCVL 262 Query: 241 LHIVSAL----EENVQAAYQCILDELSAYNSELRK---------------KIEIVGLSQI 281 H+V E + + + + EL+AY S+L + + + L++I Sbjct: 263 AHVVDLAAWEPERDPLSDIRALESELAAYASDLDRFGQVSAAGSLPPLMERRRAIILNKI 322 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 D D +A + G FE S+ T G+ Sbjct: 323 DVPDGREMAEVMRADLGRLGWPIFEVSAATHEGL 356 >gi|227874872|ref|ZP_03993025.1| spo0B-associated GTP-binding protein [Mobiluncus mulieris ATCC 35243] gi|227844647|gb|EEJ54803.1| spo0B-associated GTP-binding protein [Mobiluncus mulieris ATCC 35243] Length = 535 Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 127/334 (38%), Positives = 187/334 (55%), Gaps = 20/334 (5%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F+D K++ +G GG G S RREK+ GPDGG+GG GG + ++ + TL++F Sbjct: 24 VSFVDYVKIFATAGAGGNGCASIRREKYKPLAGPDGGAGGHGGSIILRVDPQVTTLLEFH 83 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ H A++G G R G +GED+VL VP+GT V E G L+ DL LA G Sbjct: 84 HRPHVSAENGLAGAGDYRDGKRGEDLVLPVPLGTVVTSETG-ELLADLGTPEAEYTLARG 142 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN S+ +AP +A G G+E+ + L+LK +AD+ ++G P+AGKS+ +A+++ Sbjct: 143 GVGGLGNWGLASAKRKAPGFALLGEPGEERTVILELKSVADVALVGFPSAGKSSLVAALS 202 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIADYPFTTL PNL +V F +AD+PG+I A QG G+G FL+H ER VL Sbjct: 203 AAKPKIADYPFTTLVPNLAVVDSPVTRFTMADVPGLIPGAAQGKGLGLDFLRHIERCCVL 262 Query: 241 LHIVSAL----EENVQAAYQCILDELSAYNSELRK---------------KIEIVGLSQI 281 H+V E + + + + EL+AY S+L + + + L++I Sbjct: 263 AHVVDLAAWEPERDPLSDIRALESELAAYASDLDRFGQVSAAGSLPPLMERRRAIILNKI 322 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 D D +A + G FE S+ T G+ Sbjct: 323 DVPDGREMAEVMRADLGRLGWPIFEVSAATHEGL 356 >gi|258651737|ref|YP_003200893.1| GTPase ObgE [Nakamurella multipartita DSM 44233] gi|258554962|gb|ACV77904.1| GTP-binding protein Obg/CgtA [Nakamurella multipartita DSM 44233] Length = 504 Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 133/331 (40%), Positives = 194/331 (58%), Gaps = 21/331 (6%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D A +++++G+GG G S REKF GGPDGG+GG GGDV + +++TL+DF + Sbjct: 3 RFVDHAVLHLQAGNGGHGCASVHREKFRPLGGPDGGNGGNGGDVTLVVDDSVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H KA +G G N+ GA GE +VL VP GT V DG +++ DL G + + A GG Sbjct: 63 RPHAKAGNGRPGQGDNKDGANGEALVLKVPAGTVVLGPDG-TVLADLVGAGSQYVAARGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+ I L+LK +AD+G++G P+AGKS+ ++ ++ Sbjct: 122 RGGLGNAALASRARKAPGFALLGEPGEFAEIVLELKSVADVGLVGFPSAGKSSLVSVLSA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A+PKIADYPFTTL PNLG+V G + F +AD+PG+I A QG G+G FL+H ER VL Sbjct: 182 ARPKIADYPFTTLEPNLGVVTAGSEVFTVADVPGLIPGASQGKGLGLEFLRHIERCSVLA 241 Query: 242 HIVSALEENVQAAYQCILDELSAYN--------------SELRKKIEIVGLSQIDTVDSD 287 H++ A Y+ D LS S+L +K +V L++ID ++ Sbjct: 242 HVIDC------ATYETGRDPLSDITALEFELAEYGADLASDLTEKPRLVVLNKIDVPEAR 295 Query: 288 TLARKKNELATQCGQVPFEFSSITGHGIPQI 318 LA G F S++T G+ ++ Sbjct: 296 ELAEFVRPDLEAAGYRVFLISAVTHEGLSEL 326 >gi|291320457|ref|YP_003515721.1| GTP binding protein [Mycoplasma agalactiae] gi|290752792|emb|CBH40767.1| GTP binding protein [Mycoplasma agalactiae] Length = 422 Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 119/283 (42%), Positives = 177/283 (62%), Gaps = 5/283 (1%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 KF+DE K+ + +G GG G ISFRRE ++ GGPDGG GG+GG+++ NTL+ Sbjct: 3 KFIDEIKLTLIAGKGGDGIISFRREAHVDKGGPDGGDGGKGGNIYFVGDKGKNTLLSLYG 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + A+ G G +N GA G+ + VP+GT VF+ D L+ D+ +E + ++ A GG Sbjct: 63 NKQISAEDGVNGGPKNLYGATGKSTYVKVPIGTMVFKND--KLVADIIEEKEYLV-AQGG 119 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA FKSS N AP G G++ + + LK+++D+GIIG P+AGKST L++++ Sbjct: 120 IGGRGNAKFKSSRNTAPRICENGTPGEKYLAHIVLKVMSDVGIIGKPSAGKSTLLSAISN 179 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AK KIA+Y FTTL P LG+VK F +AD+PG+IK A +G G+G +FL+H ER V++ Sbjct: 180 AKAKIAEYEFTTLVPQLGLVKYHDHSFTVADLPGLIKGASEGKGLGIQFLRHIERCRVVV 239 Query: 242 HIVS--ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 I+ + E+N + I EL Y+ +L K ++V ++ D Sbjct: 240 QIIDFGSEEKNPIEDFGIINKELEEYSKKLASKPKVVVANKSD 282 >gi|117927966|ref|YP_872517.1| GTPase ObgE [Acidothermus cellulolyticus 11B] gi|261266639|sp|A0LSX1|OBG_ACIC1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|117648429|gb|ABK52531.1| GTP1/OBG sub domain protein [Acidothermus cellulolyticus 11B] Length = 476 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 125/290 (43%), Positives = 179/290 (61%), Gaps = 11/290 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V++R GDGG G S RREKF GGPDGG+GGRGGDV TL+D + Sbjct: 4 FVDRVVVHVRGGDGGNGCASIRREKFKPLGGPDGGNGGRGGDVVFVVDPGTTTLLDLHRR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H +A G G N+ GA G D+++ VP GT V + DG ++ DL G R + A GG Sbjct: 64 PHRRAAPGSPGQGNNKHGADGADLLIPVPDGTVVKDLDG-QVLADLVGAGTRYVAARGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G+E+ + +++K +ADI ++G PNAGKS+ +A+++ A Sbjct: 123 GGLGNAALASARRKAPGFALRGEPGEERDVVVEVKSVADIALVGYPNAGKSSLIAAISAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G F +AD+PG+++ A QG G+G FL+H ER ++H Sbjct: 183 RPKIADYPFTTLAPNLGVVEAGEIRFTVADVPGLVRGASQGRGLGLEFLRHIERCAAVVH 242 Query: 243 IVSAL----EENVQAAYQCILDELSAYNS------ELRKKIEIVGLSQID 282 +V + + A I EL+AY S L ++ ++V L++ID Sbjct: 243 VVDCAAAEPDRSPLADLAAIRAELAAYASLDLGGPPLHERPQLVVLNKID 292 >gi|148377771|ref|YP_001256647.1| GTPase ObgE [Mycoplasma agalactiae PG2] gi|261266885|sp|A5IYU8|OBG_MYCAP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|148291817|emb|CAL59207.1| GTP binding protein [Mycoplasma agalactiae PG2] Length = 422 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 118/283 (41%), Positives = 178/283 (62%), Gaps = 5/283 (1%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 KF+DE K+ + +G GG G ISFRRE ++ GGPDGG GG+GG+++ NTL+ Sbjct: 3 KFIDEIKLTLIAGKGGDGIISFRREAHVDKGGPDGGDGGKGGNIYFVGDKGKNTLLSLYG 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + A+ G G +N GA G+ + VP+GT VF+ D L+ D+ +E + ++ A GG Sbjct: 63 NKQISAEDGINGGPKNLYGATGKSTYVKVPIGTMVFKND--KLVADIIEEKEYLV-AQGG 119 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA FKS+ N AP G G++ + + LK+++D+GIIG P+AGKST L++++ Sbjct: 120 IGGRGNAKFKSNRNTAPRICENGTPGEKYLAHIVLKVMSDVGIIGKPSAGKSTLLSAISN 179 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AK KIA+Y FTTL P LG+VK F +AD+PG+IK A +G G+G +FL+H ER V++ Sbjct: 180 AKAKIAEYEFTTLVPQLGLVKYHDHSFTVADLPGLIKGASEGKGLGIQFLRHIERCRVVV 239 Query: 242 HIVS--ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 I+ + E+N ++ I EL Y+ +L K ++V ++ D Sbjct: 240 QIIDFGSEEKNPIEDFEIINKELEEYSKKLASKPKVVVANKSD 282 >gi|254392425|ref|ZP_05007606.1| obg protein [Streptomyces clavuligerus ATCC 27064] gi|294812595|ref|ZP_06771238.1| GTPase obg [Streptomyces clavuligerus ATCC 27064] gi|326440955|ref|ZP_08215689.1| GTPase CgtA [Streptomyces clavuligerus ATCC 27064] gi|197706093|gb|EDY51905.1| obg protein [Streptomyces clavuligerus ATCC 27064] gi|294325194|gb|EFG06837.1| GTPase obg [Streptomyces clavuligerus ATCC 27064] Length = 479 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 187/320 (58%), Gaps = 6/320 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ +G+GG G S REKF GGPDGG+GGRGGDV + ++ TL+D+ + Sbjct: 4 FVDRVELHVAAGNGGHGCASVHREKFKPLGGPDGGNGGRGGDVILVVDQSVTTLLDYHHS 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H KA +G G NRSG G D+VL VP GT V + G ++ DL G + GG Sbjct: 64 PHRKATNGMPGEGGNRSGRDGTDLVLPVPDGTVVLDAHG-EVLADLVGHGTTFVAGQGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S+ +AP +A G G+ + + L+LK +AD+ ++G P+AGKS+ ++ ++ A Sbjct: 123 GGLGNAALASARRKAPGFALLGEPGEARDVVLELKTVADVALVGYPSAGKSSLISVLSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 KPKIADYPFTTLVPNLGVVTAGSTVYTIADVPGLIPGASQGRGLGLEFLRHVERCSVLVH 242 Query: 243 IV--SALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ + LE + I EL Y L + IV L+++D D LA Sbjct: 243 VLDTATLESDRDPVSDLDVIEAELKEYGG-LGDRPRIVVLNKVDIPDGRDLAEMIRPDLE 301 Query: 299 QCGQVPFEFSSITGHGIPQI 318 G FE S++ G+ ++ Sbjct: 302 ARGYRVFEVSAVARTGLKEL 321 >gi|308234757|ref|ZP_07665494.1| GTPase ObgE [Gardnerella vaginalis ATCC 14018] gi|311114207|ref|YP_003985428.1| GTP-binding protein [Gardnerella vaginalis ATCC 14019] gi|310945701|gb|ADP38405.1| GTP-binding protein [Gardnerella vaginalis ATCC 14019] Length = 554 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 134/349 (38%), Positives = 202/349 (57%), Gaps = 21/349 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+++ GDGG G RREK+ GP+GG+GG GG V A N N+L+D+R+ Sbjct: 4 FVDRVTVHVKGGDGGNGSAGVRREKYKPLAGPNGGNGGNGGSVIFVADRNANSLLDYRFM 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGIS--------LICDLDQEGQR 114 H AQ G G+ + G+KGED++L VPVGT VFE G + ++ DL G Sbjct: 64 PHRVAQSGTMGLGDTKDGSKGEDLMLPVPVGTVVFEAKGAAGAQKKPGNVLADLQHVGDT 123 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 ++A GG GG GNA + T +AP +A G G+E+ + L+LK IAD+ ++G P+AGKS+ Sbjct: 124 FVVAVGGAGGLGNAALANKTRRAPGFALLGEPGEERDVILELKSIADVALVGFPSAGKSS 183 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +AS++ AKPKIADYPFTTL PNLG+V G + +AD+PG+I A +G G+G FL+H Sbjct: 184 LVASISAAKPKIADYPFTTLVPNLGVVSFGEYRYTIADVPGLIPGASEGKGLGLEFLRHI 243 Query: 235 ERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + + Y+ + ELS Y +L ++ I+ L++I Sbjct: 244 ERTEIIAHVIDCATLGPNRDPISDYKALEHELSQYADKLDLPLGAIPIPERPRIIVLNKI 303 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 D ++ LA + G FE S+ + G+ ++ L + S+R Sbjct: 304 DVPEAKELAEFVRSDFEKMGFPVFEISTASHEGLKELGFALGKMVASMR 352 >gi|145527963|ref|XP_001449781.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|74831349|emb|CAI39287.1| obg_C77 [Paramecium tetraurelia] gi|124417370|emb|CAK82384.1| unnamed protein product [Paramecium tetraurelia] Length = 369 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 116/289 (40%), Positives = 181/289 (62%), Gaps = 10/289 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G + + R++ + G PDGG GG+GGD++++A+ + L R + Sbjct: 22 FVDKMKIKVKAGDGGKGCVCYYRDRIVVTGAPDGGDGGKGGDIYLKASEQIYDLSIIR-K 80 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE---EDGISLICDLDQEGQRIILAP 119 H +G++GMK +G G D+ + VP+GT V+E +D LI DLD++ + ++A Sbjct: 81 PHLFGINGKQGMKLKCNGKTGSDIKVNVPLGTLVYELKSDDTKELIADLDEQNKECLVAK 140 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG GNA N G GQEK I+L++K +ADIG++G PNAGKSTFLA+ Sbjct: 141 GGAGGKGNAR-----NIGIREVQLGQQGQEKDIFLEVKTLADIGLVGFPNAGKSTFLAAA 195 Query: 180 TRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 +RA PKIADYPFTTL P +G V+ E +ADIPG+I+ AH G+G FL+H ER Sbjct: 196 SRALPKIADYPFTTLNPMVGKVRFVDNMEMTIADIPGLIEEAHNDKGLGHEFLRHIERCR 255 Query: 239 VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 +LL+++ N++ Q + E+ YN ++ +K +V +++ D + + Sbjct: 256 LLLYVLDGQAGNIEEQLQILKSEIKEYNEKILEKPYLVCVNKADLIKQE 304 >gi|308189950|ref|YP_003922881.1| GTP-binding protein [Mycoplasma fermentans JER] gi|319777231|ref|YP_004136882.1| gtp-binding protein [Mycoplasma fermentans M64] gi|307624692|gb|ADN68997.1| GTP-binding protein [Mycoplasma fermentans JER] gi|318038306|gb|ADV34505.1| GTP-binding protein [Mycoplasma fermentans M64] Length = 422 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 116/286 (40%), Positives = 177/286 (61%), Gaps = 4/286 (1%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+DE K+ +++G GG G ISFRRE ++ GGPDGG GGRGG+++ NTL++ Sbjct: 3 RFIDEIKITLQAGKGGDGMISFRREAHVDKGGPDGGDGGRGGNIYFIGDLGKNTLLNLYG 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + A+ G G +N GA G+D + VP+GT V++ + + + D+ + + ++A GG Sbjct: 63 NKKITAEDGINGGPKNLYGAAGKDTYVKVPLGTVVYKNNKV--VADIIEPNKNYLVAQGG 120 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN FKS N AP G G++ + LK+++D+G++G P+AGKST L+ ++ Sbjct: 121 QGGRGNMKFKSPRNTAPRICENGTKGEKFEAHIVLKVMSDVGVVGKPSAGKSTLLSVISN 180 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AK KIA+Y FTTL P LG+V+ F +AD+PG+IK A G G+G +FLKH ER V+ Sbjct: 181 AKAKIAEYEFTTLVPQLGLVRYFDNSFTVADLPGLIKGASLGKGLGFQFLKHIERCRVIA 240 Query: 242 HIVS--ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 HI+ E+N Y+ I +EL++Y+ L K +IV ++ D D Sbjct: 241 HIIDFGLSEKNPIEDYETINNELASYSMHLENKPQIVVANKSDMPD 286 >gi|238809901|dbj|BAH69691.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 426 Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 116/286 (40%), Positives = 177/286 (61%), Gaps = 4/286 (1%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+DE K+ +++G GG G ISFRRE ++ GGPDGG GGRGG+++ NTL++ Sbjct: 7 RFIDEIKITLQAGKGGDGMISFRREAHVDKGGPDGGDGGRGGNIYFIGDLGKNTLLNLYG 66 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + A+ G G +N GA G+D + VP+GT V++ + + + D+ + + ++A GG Sbjct: 67 NKKITAEDGINGGPKNLYGAAGKDTYVKVPLGTVVYKNNKV--VADIIEPNKNYLVAQGG 124 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN FKS N AP G G++ + LK+++D+G++G P+AGKST L+ ++ Sbjct: 125 QGGRGNMKFKSPRNTAPRICENGTKGEKFEAHIVLKVMSDVGVVGKPSAGKSTLLSVISN 184 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AK KIA+Y FTTL P LG+V+ F +AD+PG+IK A G G+G +FLKH ER V+ Sbjct: 185 AKAKIAEYEFTTLVPQLGLVRYFDNSFTVADLPGLIKGASLGKGLGFQFLKHIERCRVIA 244 Query: 242 HIVS--ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 HI+ E+N Y+ I +EL++Y+ L K +IV ++ D D Sbjct: 245 HIIDFGLSEKNPIEDYETINNELASYSMHLENKPQIVVANKSDMPD 290 >gi|294155732|ref|YP_003560116.1| putative rRNA maturation-associated GTP-binding protein [Mycoplasma crocodyli MP145] gi|291600372|gb|ADE19868.1| putative rRNA maturation-associated GTP-binding protein [Mycoplasma crocodyli MP145] Length = 420 Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 114/283 (40%), Positives = 174/283 (61%), Gaps = 4/283 (1%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D+ + +++G GG G ISFRRE ++ GGPDGG GG GG+++ NTL+ F Sbjct: 3 RFIDQINILVQAGKGGDGMISFRREAHVDKGGPDGGDGGNGGNIYFVGDLGKNTLLSFYK 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 +H A+ G KG +N GA + VP+GT V++ + LICD+ + ++A GG Sbjct: 63 NKHIIAEDGVKGGSKNLYGANAFHTYIKVPIGTLVYKNN--KLICDVIEPDVPYLVAKGG 120 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN FK+S N AP G+ G++ + LK+++D+G++G P+AGKSTFL +++ Sbjct: 121 KGGRGNTKFKTSKNTAPRICENGLPGEKYEAKIVLKILSDVGVVGKPSAGKSTFLNAISN 180 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 A K+A+Y FTTL P LG+VK F +AD+PG+IK A G G+G +FLKH ER V+ Sbjct: 181 ANAKVAEYEFTTLVPQLGMVKYFENSFSVADLPGLIKGAALGKGLGIQFLKHIERCRVIA 240 Query: 242 HIVSALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQID 282 HI+ E Y+ I +EL +Y+ +L +K ++V ++ D Sbjct: 241 HIIDFGSETKDPIKDYEVINNELKSYDLKLEEKEQLVIANKSD 283 >gi|13508302|ref|NP_110252.1| GTPase ObgE [Mycoplasma pneumoniae M129] gi|2495114|sp|P75215|OBG_MYCPN RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|1673950|gb|AAB95927.1| small GTPase OBG involved in cell growth [Mycoplasma pneumoniae M129] gi|301633608|gb|ADK87162.1| Obg family GTPase CgtA [Mycoplasma pneumoniae FH] Length = 433 Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 131/341 (38%), Positives = 195/341 (57%), Gaps = 7/341 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M D + +G+GG G I++RRE + GGP GG+GG GG+V +QA N ++L + Sbjct: 1 MGLTDYCECRFSAGNGGNGIIAWRREAHYDKGGPGGGNGGNGGNVVLQADHNCDSLFFLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++H A+ G G G GED+V+ VPVGT V + D ++ D + Q IL G Sbjct: 61 NKKHLFAESGGNGKPDLAHGKNGEDLVIKVPVGTTVRDLDTNQILMDFVHDQQSFILCYG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FKS +AP G GQ + L++K +A++GI+G PN GKST ++ ++ Sbjct: 121 GKGGKGNAAFKSPIMRAPNLYENGDKGQSLHVSLEIKYLANVGIVGFPNTGKSTLISKLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIA+Y FTTL P LG+VK + + ADIPG+I+NA +G+G+G FL+H ER +L Sbjct: 181 NAKPKIANYRFTTLVPVLGVVKHNDQSLVFADIPGLIENASEGSGLGHYFLRHIERCEIL 240 Query: 241 LHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +H++S ++ AY+ I+ ELS Y+ L KK +V ++ D T +K + Sbjct: 241 IHLISLDPVDHDDPCQAYEQIMRELSKYSQLLVKKKMLVVANKTDVDLDGTRFQKLAQYL 300 Query: 298 TQCGQVPFEFSSIT---GHGIPQILECLHDKIFSIRGENEF 335 G F+ S++ G + Q+ LH K + G N+F Sbjct: 301 ENKGIPLFKISALKQELGDLVAQVF-ALHQKTLAQFGANKF 340 >gi|298252880|ref|ZP_06976674.1| GTPase [Gardnerella vaginalis 5-1] gi|297533244|gb|EFH72128.1| GTPase [Gardnerella vaginalis 5-1] Length = 560 Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 130/337 (38%), Positives = 199/337 (59%), Gaps = 21/337 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+++ GDGG G RREK+ GP+GG+GG GG V A N N+L+D+R+ Sbjct: 4 FVDRVTVHVKGGDGGNGSAGVRREKYKPLAGPNGGNGGDGGSVIFVADRNANSLLDYRFM 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGIS--------LICDLDQEGQR 114 H A++G G+ + G+KG D+VL VPVGT VF G + ++ DL G + Sbjct: 64 PHRTAENGTMGLGDTKDGSKGADLVLPVPVGTVVFTARGAAGSQKRPGEVLADLQHVGDK 123 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 ++A GG GG GNA + T +AP +A G G+E+ + L+LK IAD+ ++G P+AGKS+ Sbjct: 124 FVVAQGGAGGLGNAALANKTRRAPGFALLGEPGEERDVILELKSIADVALVGFPSAGKSS 183 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +AS++ AKPKIADYPFTTL PNLG+V G + +AD+PG+I A +G G+G FL+H Sbjct: 184 LVASISAAKPKIADYPFTTLVPNLGVVSFGNYRYTIADVPGLIPGASEGKGLGLEFLRHI 243 Query: 235 ERTHVLLHIV--SALEENVQ--AAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + LE N + Y + EL+ Y +L ++ I+ L+++ Sbjct: 244 ERTEIIAHVIDCATLEPNRDPISDYHALEHELAQYADKLELPLGAIPIPERPRIIVLNKV 303 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 D ++ LA + G FE S+ + G+ ++ Sbjct: 304 DVPEAKELADFVRGEFEKMGLTVFEISTASHEGLKEL 340 >gi|260903384|ref|ZP_05911779.1| Obg family GTPase CgtA [Vibrio parahaemolyticus AQ4037] gi|308109032|gb|EFO46572.1| Obg family GTPase CgtA [Vibrio parahaemolyticus AQ4037] Length = 327 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 109/267 (40%), Positives = 165/267 (61%), Gaps = 8/267 (2%) Query: 65 FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGG 124 ++A+ GE G N +G +G+D+VL VPVGT+ + ++ ++ + G+++++A GG G Sbjct: 2 YEAERGENGRGGNCTGKRGKDIVLRVPVGTRAVDIHTNEIVAEVAEHGKKVMVAKGGWHG 61 Query: 125 FGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKP 184 GN FKSS N+AP G G+ + I L+L L+AD+G++GLPNAGKSTF+ +V+ AKP Sbjct: 62 LGNTRFKSSVNRAPRQRTLGTKGEIREIRLELLLLADVGMLGLPNAGKSTFIRAVSAAKP 121 Query: 185 KIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHI 243 K+ADYPFTTL P+LG+V K F++ADIPG+I+ A GAG+G RFLKH ER VLLH+ Sbjct: 122 KVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAADGAGLGIRFLKHLERCRVLLHM 181 Query: 244 VSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 + + + VQ A I+DEL Y+ +L K + +++D + + K E+ Sbjct: 182 IDIMPIDQSDPVQNAL-TIIDELEQYSEKLASKPRWLVFNKVDLMPEEEANEKIQEILDA 240 Query: 300 CGQVP--FEFSSITGHGIPQILECLHD 324 G F+ S+I G ++ L D Sbjct: 241 LGWEDEYFKISAINRSGTKELCYKLAD 267 >gi|296170492|ref|ZP_06852079.1| Spo0B-associated GTP-binding protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894844|gb|EFG74566.1| Spo0B-associated GTP-binding protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 480 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 134/329 (40%), Positives = 188/329 (57%), Gaps = 18/329 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ R+G GG G S REKF GGPDGG+GGRGG + ++TL+DF + Sbjct: 3 RFVDRVVIHARAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H A G++GM NR GA G D+ + VP GT V +E+G L+ DL G R A GG Sbjct: 63 HPHVTAPSGKQGMGNNRDGAAGADLEVKVPDGTVVLDENG-RLLADLVGAGTRFEAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+ + + L+LK +AD G+IG P+AGKS+ +++++ Sbjct: 122 RGGLGNAALASRARKAPGFALLGEQGEARDLTLELKTVADAGLIGFPSAGKSSLVSAISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A QG G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLVPNLGVVSAGEHTFTVADVPGLIPGASQGRGLGLDFLRHIERCAVLV 241 Query: 242 HIVSALEENVQAAYQCILD------ELSAYNS---------ELRKKIEIVGLSQIDTVDS 286 H+V + I D EL+AY +L ++ V L++ID ++ Sbjct: 242 HVVDC--ATAEPGRDPISDIDALEAELAAYTPTLQGDATLGDLAERPRAVVLNKIDVPEA 299 Query: 287 DTLARKKNELATQCGQVPFEFSSITGHGI 315 LA + + G F SS+ G+ Sbjct: 300 RELAEFVRDEIAERGWPVFLVSSVARVGL 328 >gi|215404378|ref|ZP_03416559.1| GTPase ObgE [Mycobacterium tuberculosis 02_1987] gi|215446687|ref|ZP_03433439.1| GTPase ObgE [Mycobacterium tuberculosis T85] gi|289746223|ref|ZP_06505601.1| GTP-binding protein [Mycobacterium tuberculosis 02_1987] gi|289758572|ref|ZP_06517950.1| GTP-binding protein [Mycobacterium tuberculosis T85] gi|294994450|ref|ZP_06800141.1| GTPase ObgE [Mycobacterium tuberculosis 210] gi|289686751|gb|EFD54239.1| GTP-binding protein [Mycobacterium tuberculosis 02_1987] gi|289714136|gb|EFD78148.1| GTP-binding protein [Mycobacterium tuberculosis T85] gi|326904055|gb|EGE50988.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis W-148] Length = 479 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 130/323 (40%), Positives = 185/323 (57%), Gaps = 14/323 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ R+G GG G S REKF GGPDGG+GGRGG + ++TL+DF + Sbjct: 3 RFVDRVVIHTRAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H A G+ GM NR GA G D+ + VP GT V +E+G L+ DL G R A GG Sbjct: 63 RPHLTAASGKHGMGNNRDGAAGADLEVKVPEGTVVLDENG-RLLADLVGAGTRFEAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G GQ + + L+LK +AD+G++G P+AGKS+ +++++ Sbjct: 122 RGGLGNAALASRVRKAPGFALLGEKGQSRDLTLELKTVADVGLVGFPSAGKSSLVSAISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A +G G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLVPNLGVVSAGEHAFTVADVPGLIPGASRGRGLGLDFLRHIERCAVLV 241 Query: 242 HIVSALE----ENVQAAYQCILDELSAYNS---------ELRKKIEIVGLSQIDTVDSDT 288 H+V + + + EL+ Y +L + V L++ID ++ Sbjct: 242 HVVDCATAEPGRDPISDIDALETELACYTPTLQGDAALGDLAARPRAVVLNKIDVPEARE 301 Query: 289 LARKKNELATQCGQVPFEFSSIT 311 LA + Q G F S+ T Sbjct: 302 LAEFVRDDIAQRGWPVFCVSTAT 324 >gi|308232132|ref|ZP_07415048.2| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu001] gi|308369719|ref|ZP_07418822.2| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu002] gi|308371014|ref|ZP_07423559.2| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu003] gi|308372233|ref|ZP_07427918.2| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu004] gi|308373411|ref|ZP_07432225.2| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu005] gi|308374579|ref|ZP_07436619.2| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu006] gi|308375889|ref|ZP_07445431.2| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu007] gi|308378015|ref|ZP_07481256.2| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu009] gi|308379203|ref|ZP_07668917.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu010] gi|308380368|ref|ZP_07669175.1| putative Obg family GTPase CgtA [Mycobacterium tuberculosis SUMu011] gi|308214872|gb|EFO74271.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu001] gi|308326634|gb|EFP15485.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu002] gi|308330059|gb|EFP18910.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu003] gi|308333899|gb|EFP22750.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu004] gi|308337702|gb|EFP26553.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu005] gi|308341383|gb|EFP30234.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu006] gi|308344870|gb|EFP33721.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu007] gi|308353801|gb|EFP42652.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu009] gi|308357751|gb|EFP46602.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu010] gi|308361695|gb|EFP50546.1| putative Obg family GTPase CgtA [Mycobacterium tuberculosis SUMu011] Length = 489 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 130/323 (40%), Positives = 185/323 (57%), Gaps = 14/323 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ R+G GG G S REKF GGPDGG+GGRGG + ++TL+DF + Sbjct: 13 RFVDRVVIHTRAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDFHF 72 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H A G+ GM NR GA G D+ + VP GT V +E+G L+ DL G R A GG Sbjct: 73 RPHLTAASGKHGMGNNRDGAAGADLEVKVPEGTVVLDENG-RLLADLVGAGTRFEAAAGG 131 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G GQ + + L+LK +AD+G++G P+AGKS+ +++++ Sbjct: 132 RGGLGNAALASRVRKAPGFALLGEKGQSRDLTLELKTVADVGLVGFPSAGKSSLVSAISA 191 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A +G G+G FL+H ER VL+ Sbjct: 192 AKPKIADYPFTTLVPNLGVVSAGEHAFTVADVPGLIPGASRGRGLGLDFLRHIERCAVLV 251 Query: 242 HIVSALE----ENVQAAYQCILDELSAYNS---------ELRKKIEIVGLSQIDTVDSDT 288 H+V + + + EL+ Y +L + V L++ID ++ Sbjct: 252 HVVDCATAEPGRDPISDIDALETELACYTPTLQGDAALGDLAARPRAVVLNKIDVPEARE 311 Query: 289 LARKKNELATQCGQVPFEFSSIT 311 LA + Q G F S+ T Sbjct: 312 LAEFVRDDIAQRGWPVFCVSTAT 334 >gi|71894190|ref|YP_278298.1| GTPase ObgE [Mycoplasma synoviae 53] gi|123644405|sp|Q4A6N4|OBG_MYCS5 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|71850978|gb|AAZ43587.1| GTP-binding protein Obg [Mycoplasma synoviae 53] Length = 424 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 125/323 (38%), Positives = 197/323 (60%), Gaps = 14/323 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 KF+D+ K+ +++G GG G ISFRRE ++ GGPDGG GG GG+++ A NTL+ F Sbjct: 3 KFIDQVKIMLKAGKGGDGMISFRREAHVDKGGPDGGDGGTGGNIYFVADLGKNTLLSFYK 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + A+ G KG +N GAKG+D ++ VP+GT V++ I + D+ +E ++A GG Sbjct: 63 NKFIIAEDGVKGGPKNLYGAKGKDTIVKVPLGTLVYKNKKI--VADVIKENHLYLVAKGG 120 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN FK+S N AP A G+ G++ + LK+++D+G++GLP+ GKST + +++ Sbjct: 121 KGGRGNNKFKTSKNTAPRIAENGMPGEKYEANIVLKILSDVGLVGLPSCGKSTLINALSN 180 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AK K+A+Y FTTL P LG+VK + +AD+PG+IK A G G+G +FL+H ER V++ Sbjct: 181 AKAKVAEYEFTTLVPQLGLVKYYDYSYTIADLPGLIKGASLGKGLGIQFLRHIERCKVVI 240 Query: 242 HIVS--ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 HIV +L+++ +Y+ I EL +Y L +K ++V ++ D LA KN + Sbjct: 241 HIVDFGSLDKDPIQSYEAIQKELESYKLNLTQKPQLVVANKSD------LANFKNNIEKF 294 Query: 300 CGQVP----FEFSSITGHGIPQI 318 + P E S++ H + + Sbjct: 295 KAKYPNIEIIEISALNYHNVENL 317 >gi|15609577|ref|NP_216956.1| GTPase ObgE [Mycobacterium tuberculosis H37Rv] gi|31793621|ref|NP_856114.1| GTPase ObgE [Mycobacterium bovis AF2122/97] gi|121638323|ref|YP_978547.1| GTPase ObgE [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662275|ref|YP_001283798.1| GTPase ObgE [Mycobacterium tuberculosis H37Ra] gi|148823642|ref|YP_001288396.1| GTPase ObgE [Mycobacterium tuberculosis F11] gi|161350065|ref|NP_336999.2| GTPase ObgE [Mycobacterium tuberculosis CDC1551] gi|215412199|ref|ZP_03420961.1| GTPase ObgE [Mycobacterium tuberculosis 94_M4241A] gi|215427826|ref|ZP_03425745.1| GTPase ObgE [Mycobacterium tuberculosis T92] gi|218754171|ref|ZP_03532967.1| GTPase ObgE [Mycobacterium tuberculosis GM 1503] gi|224990817|ref|YP_002645504.1| GTPase [Mycobacterium bovis BCG str. Tokyo 172] gi|253798480|ref|YP_003031481.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis KZN 1435] gi|254551490|ref|ZP_05141937.1| GTPase ObgE [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260187449|ref|ZP_05764923.1| GTPase ObgE [Mycobacterium tuberculosis CPHL_A] gi|260201568|ref|ZP_05769059.1| GTPase ObgE [Mycobacterium tuberculosis T46] gi|289443966|ref|ZP_06433710.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis T46] gi|289448084|ref|ZP_06437828.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis CPHL_A] gi|289553768|ref|ZP_06442978.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis KZN 605] gi|289751047|ref|ZP_06510425.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis T92] gi|289762609|ref|ZP_06521987.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis GM 1503] gi|297635048|ref|ZP_06952828.1| GTPase ObgE [Mycobacterium tuberculosis KZN 4207] gi|297732039|ref|ZP_06961157.1| GTPase ObgE [Mycobacterium tuberculosis KZN R506] gi|298525920|ref|ZP_07013329.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis 94_M4241A] gi|306804192|ref|ZP_07440860.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu008] gi|307085127|ref|ZP_07494240.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu012] gi|313659375|ref|ZP_07816255.1| GTPase CgtA [Mycobacterium tuberculosis KZN V2475] gi|81573391|sp|Q7TYK5|OBG_MYCBO RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|81670081|sp|P71909|OBG_MYCTU RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266886|sp|A1KLD6|OBG_MYCBP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261277649|sp|A5U5D6|OBG_MYCTA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|1666144|emb|CAB03779.1| PROBABLE GTP1/OBG-FAMILY GTP-BINDING PROTEIN OBG [Mycobacterium tuberculosis H37Rv] gi|31619214|emb|CAD97328.1| PROBABLE GTP1/OBG-FAMILY GTP-BINDING PROTEIN OBG [Mycobacterium bovis AF2122/97] gi|121493971|emb|CAL72448.1| Probable GTP1/obg-family GTP-binding protein obg [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148506427|gb|ABQ74236.1| putative GTP1/obg-family GTP-binding protein Obg [Mycobacterium tuberculosis H37Ra] gi|148722169|gb|ABR06794.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis F11] gi|224773930|dbj|BAH26736.1| GTPase [Mycobacterium bovis BCG str. Tokyo 172] gi|253319983|gb|ACT24586.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis KZN 1435] gi|289416885|gb|EFD14125.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis T46] gi|289421042|gb|EFD18243.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis CPHL_A] gi|289438400|gb|EFD20893.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis KZN 605] gi|289691634|gb|EFD59063.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis T92] gi|289710115|gb|EFD74131.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis GM 1503] gi|298495714|gb|EFI31008.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis 94_M4241A] gi|308349180|gb|EFP38031.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu008] gi|308365305|gb|EFP54156.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis SUMu012] gi|323718948|gb|EGB28098.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis CDC1551A] gi|328458248|gb|AEB03671.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis KZN 4207] Length = 479 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 130/323 (40%), Positives = 185/323 (57%), Gaps = 14/323 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ R+G GG G S REKF GGPDGG+GGRGG + ++TL+DF + Sbjct: 3 RFVDRVVIHTRAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H A G+ GM NR GA G D+ + VP GT V +E+G L+ DL G R A GG Sbjct: 63 RPHLTAASGKHGMGNNRDGAAGADLEVKVPEGTVVLDENG-RLLADLVGAGTRFEAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G GQ + + L+LK +AD+G++G P+AGKS+ +++++ Sbjct: 122 RGGLGNAALASRVRKAPGFALLGEKGQSRDLTLELKTVADVGLVGFPSAGKSSLVSAISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A +G G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLVPNLGVVSAGEHAFTVADVPGLIPGASRGRGLGLDFLRHIERCAVLV 241 Query: 242 HIVSALE----ENVQAAYQCILDELSAYNS---------ELRKKIEIVGLSQIDTVDSDT 288 H+V + + + EL+ Y +L + V L++ID ++ Sbjct: 242 HVVDCATAEPGRDPISDIDALETELACYTPTLQGDAALGDLAARPRAVVLNKIDVPEARE 301 Query: 289 LARKKNELATQCGQVPFEFSSIT 311 LA + Q G F S+ T Sbjct: 302 LAEFVRDDIAQRGWPVFCVSTAT 324 >gi|13882235|gb|AAK46813.1| GTP-binding protein [Mycobacterium tuberculosis CDC1551] Length = 484 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 130/323 (40%), Positives = 185/323 (57%), Gaps = 14/323 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ R+G GG G S REKF GGPDGG+GGRGG + ++TL+DF + Sbjct: 8 RFVDRVVIHTRAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDFHF 67 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H A G+ GM NR GA G D+ + VP GT V +E+G L+ DL G R A GG Sbjct: 68 RPHLTAASGKHGMGNNRDGAAGADLEVKVPEGTVVLDENG-RLLADLVGAGTRFEAAAGG 126 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G GQ + + L+LK +AD+G++G P+AGKS+ +++++ Sbjct: 127 RGGLGNAALASRVRKAPGFALLGEKGQSRDLTLELKTVADVGLVGFPSAGKSSLVSAISA 186 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A +G G+G FL+H ER VL+ Sbjct: 187 AKPKIADYPFTTLVPNLGVVSAGEHAFTVADVPGLIPGASRGRGLGLDFLRHIERCAVLV 246 Query: 242 HIVSALE----ENVQAAYQCILDELSAYNS---------ELRKKIEIVGLSQIDTVDSDT 288 H+V + + + EL+ Y +L + V L++ID ++ Sbjct: 247 HVVDCATAEPGRDPISDIDALETELACYTPTLQGDAALGDLAARPRAVVLNKIDVPEARE 306 Query: 289 LARKKNELATQCGQVPFEFSSIT 311 LA + Q G F S+ T Sbjct: 307 LAEFVRDDIAQRGWPVFCVSTAT 329 >gi|260205746|ref|ZP_05773237.1| GTPase ObgE [Mycobacterium tuberculosis K85] gi|289575135|ref|ZP_06455362.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis K85] gi|289539566|gb|EFD44144.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis K85] Length = 479 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 130/323 (40%), Positives = 185/323 (57%), Gaps = 14/323 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ R+G GG G S REKF GGPDGG+GGRGG + ++TL+DF + Sbjct: 3 RFVDRVVIHTRAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H A G+ GM NR GA G D+ + VP GT V +E+G L+ DL G R A GG Sbjct: 63 RPHLTAASGKHGMGNNRDGAAGADLEVKVPEGTVVLDENG-RLLADLVGAGTRFEAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G GQ + + L+LK +AD+G++G P+AGKS+ +++++ Sbjct: 122 RGGLGNAALASRVRKAPGFALLGEKGQPRDLTLELKTVADVGLVGFPSAGKSSLVSAISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A +G G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLVPNLGVVSAGEHAFTVADVPGLIPGASRGRGLGLDFLRHIERCAVLV 241 Query: 242 HIVSALE----ENVQAAYQCILDELSAYNS---------ELRKKIEIVGLSQIDTVDSDT 288 H+V + + + EL+ Y +L + V L++ID ++ Sbjct: 242 HVVDCATAEPGRDPISDIDALETELACYTPTLQGDAALGDLAARPRAVVLNKIDVPEARE 301 Query: 289 LARKKNELATQCGQVPFEFSSIT 311 LA + Q G F S+ T Sbjct: 302 LAEFVRDDIAQRGWPVFCVSTAT 324 >gi|297243305|ref|ZP_06927239.1| GTPase [Gardnerella vaginalis AMD] gi|296888712|gb|EFH27450.1| GTPase [Gardnerella vaginalis AMD] Length = 560 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 130/337 (38%), Positives = 198/337 (58%), Gaps = 21/337 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+++ GDGG G RREK+ GP+GG+GG GG V A N N+L+D+R+ Sbjct: 4 FVDRVTVHVKGGDGGNGSAGVRREKYKPLAGPNGGNGGDGGSVIFVADRNANSLLDYRFM 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGIS--------LICDLDQEGQR 114 H A++G G+ + G+KG D+VL VPVGT VF G + ++ DL G + Sbjct: 64 PHRTAENGTMGLGDTKDGSKGADLVLPVPVGTVVFTARGAAGSQKRPGEVLADLQHVGDK 123 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 ++A GG GG GNA + T +AP +A G G+E+ + L+LK IAD+ ++G P+AGKS+ Sbjct: 124 FVVAQGGAGGLGNAALANKTRRAPGFALLGEPGEERDVILELKSIADVALVGFPSAGKSS 183 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +AS++ AKPKIADYPFTTL PNLG+V G + +AD+PG+I A +G G+G FL+H Sbjct: 184 LVASISAAKPKIADYPFTTLVPNLGVVSFGNYRYTIADVPGLIPGASEGKGLGLEFLRHI 243 Query: 235 ERTHVLLHIV--SALEENVQ--AAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + LE N + Y + EL Y +L ++ I+ L+++ Sbjct: 244 ERTEIIAHVIDCATLEPNRDPISDYHALEHELVQYADKLELPLGAIPIPERPRIIVLNKV 303 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 D ++ LA + G FE S+ + G+ ++ Sbjct: 304 DVPEAKELADFVRGEFEKMGLTVFEISTASHEGLKEL 340 >gi|254365217|ref|ZP_04981263.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis str. Haarlem] gi|134150731|gb|EBA42776.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis str. Haarlem] Length = 480 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 130/323 (40%), Positives = 185/323 (57%), Gaps = 14/323 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ R+G GG G S REKF GGPDGG+GGRGG + ++TL+DF + Sbjct: 3 RFVDRVVIHTRAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H A G+ GM NR GA G D+ + VP GT V +E+G L+ DL G R A GG Sbjct: 63 RPHLTAASGKHGMGNNRDGAAGADLEVKVPEGTVVLDENG-RLLADLVGAGTRFEAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G GQ + + L+LK +AD+G++G P+AGKS+ +++++ Sbjct: 122 RGGLGNAALASRVRKAPGFALLGEKGQSRDLTLELKTVADVGLVGFPSAGKSSLVSAISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A +G G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLVPNLGVVSAGEHAFTVADVPGLIPGASRGRGLGLDFLRHIERCAVLV 241 Query: 242 HIVSALE----ENVQAAYQCILDELSAYNS---------ELRKKIEIVGLSQIDTVDSDT 288 H+V + + + EL+ Y +L + V L++ID ++ Sbjct: 242 HVVDCATAEPGRDPISDIDALETELACYTPTLQGDAALGDLAARPRAVVLNKIDVPEARE 301 Query: 289 LARKKNELATQCGQVPFEFSSIT 311 LA + Q G F S+ T Sbjct: 302 LAEFVRDDIAQRGWPVFCVSTAT 324 >gi|215431388|ref|ZP_03429307.1| GTPase ObgE [Mycobacterium tuberculosis EAS054] gi|289754549|ref|ZP_06513927.1| GTP-binding protein [Mycobacterium tuberculosis EAS054] gi|289695136|gb|EFD62565.1| GTP-binding protein [Mycobacterium tuberculosis EAS054] Length = 479 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 130/323 (40%), Positives = 184/323 (56%), Gaps = 14/323 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ R+G GG G S REKF GGPDGG+GGRGG + ++TL+DF + Sbjct: 3 RFVDRVVIHTRAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H A G+ GM NR GA G D+ + VP GT V +E G L+ DL G R A GG Sbjct: 63 RPHLTAASGKHGMGNNRDGAAGADLEVKVPEGTVVLDESG-RLLADLVGAGTRFEAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G GQ + + L+LK +AD+G++G P+AGKS+ +++++ Sbjct: 122 RGGLGNAALASRVRKAPGFALLGEKGQSRDLTLELKTVADVGLVGFPSAGKSSLVSAISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A +G G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLVPNLGVVSAGEHAFTVADVPGLIPGASRGRGLGLDFLRHIERCAVLV 241 Query: 242 HIVSALE----ENVQAAYQCILDELSAYNS---------ELRKKIEIVGLSQIDTVDSDT 288 H+V + + + EL+ Y +L + V L++ID ++ Sbjct: 242 HVVDCATAEPGRDPISDIDALETELACYTPTLQGDAALGDLAARPRAVVLNKIDVPEARE 301 Query: 289 LARKKNELATQCGQVPFEFSSIT 311 LA + Q G F S+ T Sbjct: 302 LAEFVRDDIAQRGWPVFCVSTAT 324 >gi|118466067|ref|YP_880958.1| GTPase ObgE [Mycobacterium avium 104] gi|261266882|sp|A0QDH0|OBG_MYCA1 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|118167354|gb|ABK68251.1| Spo0B-associated GTP-binding protein [Mycobacterium avium 104] Length = 492 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 130/331 (39%), Positives = 190/331 (57%), Gaps = 14/331 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ R+G GG G S REKF GGPDGG+GGRGG + ++TL+DF + Sbjct: 3 RFVDRVVIHARAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H A G++GM NR GA G D+ + VP GT V +E+G L+ DL G R A GG Sbjct: 63 HPHISAPSGKQGMGNNRDGAAGADLEVKVPDGTVVLDENG-RLLADLVGAGTRFEAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+ + + L+LK +AD+G+IG P+AGKS+ +++++ Sbjct: 122 RGGLGNAALASRARKAPGFALLGEPGETRELTLELKTVADVGLIGFPSAGKSSLVSAISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A G G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLVPNLGVVSAGEHTFTVADVPGLIPGASAGRGLGLDFLRHIERCAVLV 241 Query: 242 HIVSALEENVQAAYQCILD----ELSAYNSELRKKIEI---------VGLSQIDTVDSDT 288 H++ + +D EL+AY L+ + + V L++ID ++ Sbjct: 242 HVIDCATADPGRDPISDIDALEAELAAYTPTLQGDVTLGDLTERPRAVVLNKIDVPEARE 301 Query: 289 LARKKNELATQCGQVPFEFSSITGHGIPQIL 319 LA + + G F S++ G+ ++ Sbjct: 302 LAEFVRDEIAERGWPVFLVSTVAREGLQPLI 332 >gi|41408362|ref|NP_961198.1| GTPase ObgE [Mycobacterium avium subsp. paratuberculosis K-10] gi|81413880|sp|Q73XP5|OBG_MYCPA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|41396718|gb|AAS04581.1| Obg [Mycobacterium avium subsp. paratuberculosis K-10] Length = 492 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 130/331 (39%), Positives = 190/331 (57%), Gaps = 14/331 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ R+G GG G S REKF GGPDGG+GGRGG + ++TL+DF + Sbjct: 3 RFVDRVVIHARAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H A G++GM NR GA G D+ + VP GT V +E+G L+ DL G R A GG Sbjct: 63 HPHISAPSGKQGMGNNRDGAAGADLEVKVPDGTVVLDENG-RLLADLVGAGTRFEAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+ + + L+LK +AD+G+IG P+AGKS+ +++++ Sbjct: 122 RGGLGNAALASRARKAPGFALLGEPGETRELTLELKTVADVGLIGFPSAGKSSLVSAISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A G G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLVPNLGVVSAGEHTFTVADVPGLIPGASAGRGLGLDFLRHIERCAVLV 241 Query: 242 HIVSALEENVQAAYQCILD----ELSAYNSELRKKIEI---------VGLSQIDTVDSDT 288 H++ + +D EL+AY L+ + + V L++ID ++ Sbjct: 242 HVIDCATADPGRDPISDIDALEAELAAYTPTLQGDVTLGDLTERPRAVVLNKIDVPEARE 301 Query: 289 LARKKNELATQCGQVPFEFSSITGHGIPQIL 319 LA + + G F S++ G+ ++ Sbjct: 302 LAEFVRDEIAERGWPVFLVSTVAREGLQPLI 332 >gi|254774547|ref|ZP_05216063.1| GTPase ObgE [Mycobacterium avium subsp. avium ATCC 25291] Length = 492 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 130/327 (39%), Positives = 188/327 (57%), Gaps = 14/327 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ R+G GG G S REKF GGPDGG+GGRGG + ++TL+DF + Sbjct: 3 RFVDRVVIHARAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H A G++GM NR GA G D+ + VP GT V +E+G L+ DL G R A GG Sbjct: 63 HPHISAPSGKQGMGNNRDGAAGADLEVKVPDGTVVLDENG-RLLADLVGAGTRFEAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+ + + L+LK +AD+G+IG P+AGKS+ +++++ Sbjct: 122 RGGLGNAALASRARKAPGFALLGEPGETRELTLELKTVADVGLIGFPSAGKSSLVSAISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A G G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLVPNLGVVSAGEHTFTVADVPGLIPGASAGRGLGLDFLRHIERCAVLV 241 Query: 242 HIVSALEENVQAAYQCILD----ELSAYNSELRKKIEI---------VGLSQIDTVDSDT 288 H++ + +D EL+AY L+ + + V L++ID ++ Sbjct: 242 HVIDCATADPGRDPISDIDALEAELAAYTPTLQGDVTLGDLTERPRAVVLNKIDVPEARE 301 Query: 289 LARKKNELATQCGQVPFEFSSITGHGI 315 LA + + G F S++ G+ Sbjct: 302 LAEFVRDEIAERGWPVFLVSTVAREGL 328 >gi|167522751|ref|XP_001745713.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776062|gb|EDQ89684.1| predicted protein [Monosiga brevicollis MX1] Length = 475 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 111/290 (38%), Positives = 164/290 (56%), Gaps = 33/290 (11%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++++ G GG G G GG+GGDV+ A N+ TL R Sbjct: 66 FVDHVRLHVVGGTGGQGSARH------------GAMGGQGGDVFAMADPNVTTLQALRNM 113 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + +A+ GE G R+ + KGED +L VPVGT V ++G L DL Q G+ +LA GG+ Sbjct: 114 KRCRAEPGENG-SRHSAERKGEDAILKVPVGTLVCFDNGEPL-ADLSQPGETALLARGGD 171 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG + + S G+ G + +LK IAD+G++G PNAGKS+ L +++RA Sbjct: 172 GGSPKTNSQYS----------GLRGDRNHVIFELKAIADVGLVGFPNAGKSSLLRTISRA 221 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P+IA YPFTTL+PN+G V+ + + +ADIPG+++ A G+G FL+H ERTHVLL Sbjct: 222 RPRIASYPFTTLHPNIGTVEYDDFGRISVADIPGLVEGAALNRGMGHAFLRHVERTHVLL 281 Query: 242 HIVSA-------LEENVQAAYQCILDELSAYNSE-LRKKIEIVGLSQIDT 283 +V A + Q +L EL AY++E LR + IV +++DT Sbjct: 282 FVVDAHGFSHKEHRSTAERDLQILLQELEAYSAEWLRSRRCIVCFNKVDT 331 >gi|291000991|ref|XP_002683062.1| GTPase obg [Naegleria gruberi] gi|284096691|gb|EFC50318.1| GTPase obg [Naegleria gruberi] Length = 598 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 111/249 (44%), Positives = 163/249 (65%), Gaps = 7/249 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 ++++D+ V ++ G+GG G + F REK+ G GG GG GG V+I++ + +L D Sbjct: 62 IQYIDQCMVRVKGGNGGNGYVHFLREKYKPIGKASGGDGGSGGSVFIKSVDSRRSLCDID 121 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + Q KA GE G KRN++G KG + + VP+GTQ+F+ D L+ DL +G +++ G Sbjct: 122 FIQ--KAPDGENGQKRNKNGRKGVNTYIYVPLGTQIFDADTKELVADLQNDGDEVLVVKG 179 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF SSTN++P + GI G+++I+ LKLK IAD+G++G PNAGKST L S++ Sbjct: 180 GKGGLGNQHFSSSTNRSPQQSLDGIKGEQRILKLKLKTIADVGLLGYPNAGKSTLLGSIS 239 Query: 181 RAKPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAH---QGAGIGDRFLKHTE 235 AKPK+A Y FTTL+P +G V E F ADIPG+I+ + + G+G FL+H E Sbjct: 240 TAKPKVAAYSFTTLHPTVGEVYHSESGFTFSCADIPGLIEGMNSKLKTKGLGHDFLQHIE 299 Query: 236 RTHVLLHIV 244 RT +LL++V Sbjct: 300 RTKLLLYVV 308 >gi|254819835|ref|ZP_05224836.1| GTPase ObgE [Mycobacterium intracellulare ATCC 13950] Length = 499 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 133/333 (39%), Positives = 189/333 (56%), Gaps = 18/333 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ R+G GG G S REKF GGPDGG+GGRGG + ++TL+DF + Sbjct: 3 RFVDRVVIHARAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H A G++GM NR GA G D+ + VP GT V +++G L+ DL G R A GG Sbjct: 63 HPHVTAPSGKQGMGSNRDGAAGADLEVKVPDGTIVLDDNG-RLLADLVGAGTRFEAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G G+ + + L+LK +AD G+IG P+AGKS+ +++++ Sbjct: 122 RGGLGNAALASRARKAPGFALLGEQGETRDLTLELKTVADAGLIGFPSAGKSSLVSTISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A QG G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLVPNLGVVSAGEHTFTVADVPGLIPGASQGRGLGLDFLRHIERCAVLV 241 Query: 242 HIVSALEENVQAAYQCILD------ELSAYNSELR---------KKIEIVGLSQIDTVDS 286 H+V + I D EL+AY LR + V L++ID ++ Sbjct: 242 HVVDC--ATAEPGRDPISDIDALEAELAAYTPTLRGDATLGDLADRPRAVVLNKIDVPEA 299 Query: 287 DTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 LA + + G F S++ G+ ++ Sbjct: 300 RELAEFVYDEIAERGWPVFLVSTVAREGLQPLI 332 >gi|313678403|ref|YP_004056143.1| GTP1/OBG family GTP-binding protein [Mycoplasma bovis PG45] gi|312950673|gb|ADR25268.1| GTP-binding protein, GTP1/OBG family [Mycoplasma bovis PG45] Length = 422 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 116/283 (40%), Positives = 178/283 (62%), Gaps = 5/283 (1%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 KF+DE K+ + +G GG G ISFRRE ++ GGPDGG GG+GG+++ NTL+ Sbjct: 3 KFIDEIKLTLIAGKGGDGIISFRREAHVDKGGPDGGDGGKGGNIYFVGDKGKNTLLSLYG 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + A+ G G +N GA G+ + VP+GT V++ + L+ D+ +E + ++ A GG Sbjct: 63 NKQISAEDGINGGPKNLYGATGKSTYVKVPIGTMVYKNN--KLVADIVEEKEYLV-AQGG 119 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA FKSS N AP G G++ + + LK+++D+GIIG P+AGKST L++++ Sbjct: 120 IGGRGNAKFKSSRNTAPRICENGTPGEKYLAHIVLKVMSDVGIIGKPSAGKSTLLSAISN 179 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AK KIA+Y FTTL P LG+VK F +AD+PG+IK A +G G+G +FL+H ER V++ Sbjct: 180 AKAKIAEYEFTTLVPQLGLVKYHDHSFTVADLPGLIKGASEGKGLGIQFLRHIERCRVVV 239 Query: 242 HIVS--ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 I+ + E++ ++ I EL Y+ +L K ++V ++ D Sbjct: 240 QIIDFGSDEKDPIEDFEVINKELEEYSKKLASKAKVVVANKSD 282 >gi|261266650|sp|B2UQ30|OBG_AKKM8 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg Length = 350 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 118/301 (39%), Positives = 171/301 (56%), Gaps = 21/301 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ R+G GG G +SFRR KF+ GGPDGG GG GG V ++ + N L F Y Sbjct: 2 FVDNIRIFARAGKGGNGLVSFRRAKFVPKGGPDGGDGGDGGSVILEVDPHTNDLRSFFYD 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVF---------------EEDGISL--I 105 A G G + G G+ V+ VP GT ++ E +GI L I Sbjct: 62 PKLIATDGVGGQSAKKHGKNGKSVIGKVPPGTIIYRSNASSMAEATWLEREGEGIELEKI 121 Query: 106 CDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGII 165 DL + G R L GG GG GN HF+S+TNQAP A G G+E + +++L+ IAD G++ Sbjct: 122 ADLTEIGTRFTLCQGGLGGKGNWHFRSATNQAPTEAEMGTEGEEGVFFMELRRIADAGLV 181 Query: 166 GLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGA 224 G PNAGKST L ++ AKPK+A YPFTTL P +G+V+ + ++ ++ADIPGII+ AH Sbjct: 182 GYPNAGKSTLLGDISEAKPKVASYPFTTLQPIIGVVEFDSFRRCVVADIPGIIEGAHNNR 241 Query: 225 GIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQI 281 G+G FL+H R VL+ ++ + Q + E+ Y+ +L K+ V +++ Sbjct: 242 GLGHEFLRHITRCKVLVFVLDMAGSEGRDPIEDLQNLRTEIKLYSEDLAKQPWFVVANKM 301 Query: 282 D 282 D Sbjct: 302 D 302 >gi|187735234|ref|YP_001877346.1| GTP-binding protein Obg/CgtA [Akkermansia muciniphila ATCC BAA-835] gi|187425286|gb|ACD04565.1| GTP-binding protein Obg/CgtA [Akkermansia muciniphila ATCC BAA-835] Length = 356 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 118/301 (39%), Positives = 171/301 (56%), Gaps = 21/301 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ R+G GG G +SFRR KF+ GGPDGG GG GG V ++ + N L F Y Sbjct: 8 FVDNIRIFARAGKGGNGLVSFRRAKFVPKGGPDGGDGGDGGSVILEVDPHTNDLRSFFYD 67 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVF---------------EEDGISL--I 105 A G G + G G+ V+ VP GT ++ E +GI L I Sbjct: 68 PKLIATDGVGGQSAKKHGKNGKSVIGKVPPGTIIYRSNASSMAEATWLEREGEGIELEKI 127 Query: 106 CDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGII 165 DL + G R L GG GG GN HF+S+TNQAP A G G+E + +++L+ IAD G++ Sbjct: 128 ADLTEIGTRFTLCQGGLGGKGNWHFRSATNQAPTEAEMGTEGEEGVFFMELRRIADAGLV 187 Query: 166 GLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGA 224 G PNAGKST L ++ AKPK+A YPFTTL P +G+V+ + ++ ++ADIPGII+ AH Sbjct: 188 GYPNAGKSTLLGDISEAKPKVASYPFTTLQPIIGVVEFDSFRRCVVADIPGIIEGAHNNR 247 Query: 225 GIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIVGLSQI 281 G+G FL+H R VL+ ++ + Q + E+ Y+ +L K+ V +++ Sbjct: 248 GLGHEFLRHITRCKVLVFVLDMAGSEGRDPIEDLQNLRTEIKLYSEDLAKQPWFVVANKM 307 Query: 282 D 282 D Sbjct: 308 D 308 >gi|261338749|ref|ZP_05966633.1| GTP-binding protein [Bifidobacterium gallicum DSM 20093] gi|270276196|gb|EFA22050.1| GTP-binding protein [Bifidobacterium gallicum DSM 20093] Length = 563 Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 125/309 (40%), Positives = 192/309 (62%), Gaps = 21/309 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+++ GDGG G RREK+ GP+GG+GGRGG V A +N N+L+D+R+ Sbjct: 4 FVDRVTVHVKGGDGGNGSAGVRREKYKPLAGPNGGNGGRGGSVIFVADANANSLLDYRFM 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI--------SLICDLDQEGQR 114 H A +G G+ + G++G+D++L VP+GT VFE G + + DL G R Sbjct: 64 PHRNAGNGTMGLGDTKDGSQGDDLILPVPIGTVVFEAKGKEGEPKRPGAQLADLRHAGDR 123 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 ++A GG GG GNA + T +AP +A G G+E+ + L+LK IAD+ ++G P+AGKS+ Sbjct: 124 YVVAAGGAGGLGNAALANKTRRAPGFALLGEPGEERDVILELKSIADVALVGFPSAGKSS 183 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +A+++ AKPKIADYPFTTL PNLG+VK G + +AD+PG+I A QG G+G +FL+H Sbjct: 184 LIAAMSAAKPKIADYPFTTLVPNLGVVKAGDMRYTIADVPGLIPGASQGKGLGLQFLRHI 243 Query: 235 ERTHVLLHIV--SALE--ENVQAAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + LE + + Y + +EL Y+ EL ++ ++ L++ Sbjct: 244 ERTEIIAHVIDCATLEPGRDPMSDYYALENELGIYSDELELPLGAIPIPERPRVIVLNKA 303 Query: 282 DTVDSDTLA 290 D ++ LA Sbjct: 304 DVPEAKELA 312 >gi|255029869|ref|ZP_05301820.1| GTPase ObgE [Listeria monocytogenes LO28] Length = 347 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 101/249 (40%), Positives = 156/249 (62%), Gaps = 9/249 (3%) Query: 84 EDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANP 143 ED+V+ VP GT V + D +I DL GQR ++A G GG GN F + N AP + Sbjct: 1 EDLVVKVPQGTIVKDIDTGEIIADLVAHGQRAVIAKAGRGGRGNKRFATPANPAPELSEN 60 Query: 144 GILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE 203 G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A+PKIA Y FTT+ PNLG+V Sbjct: 61 GEPGQERNVQLELKVLADVGLVGFPSVGKSTLLSVVSAARPKIAAYHFTTIVPNLGMVDA 120 Query: 204 GY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQ-AAYQCIL 259 G + F++AD+PG+I+ A QG G+G +FL+H ERT V++H++ S E V Y I Sbjct: 121 GDGRSFVMADLPGLIEGASQGVGLGHQFLRHIERTRVIVHVIDMSGSEGRVPYEDYMAIN 180 Query: 260 DELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQ-VP-FEFSSITGHGIPQ 317 +EL YN L ++ +I+ +++D D++ NE T+ + +P F S++T G+ + Sbjct: 181 NELEQYNLRLMERPQIIVANKMDMPDAE---ENLNEFKTKIAEDIPVFPISAVTKTGLRE 237 Query: 318 ILECLHDKI 326 +L + DK+ Sbjct: 238 LLLAIADKL 246 >gi|15827767|ref|NP_302030.1| GTPase ObgE [Mycobacterium leprae TN] gi|221230244|ref|YP_002503660.1| GTPase ObgE [Mycobacterium leprae Br4923] gi|81537019|sp|Q9CBZ4|OBG_MYCLE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|261266893|sp|B8ZRN3|OBG_MYCLB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|13093319|emb|CAC30415.1| GTP1/Obg-family GTP-binding protein [Mycobacterium leprae] gi|219933351|emb|CAR71559.1| GTP1/Obg-family GTP-binding protein [Mycobacterium leprae Br4923] Length = 479 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 136/326 (41%), Positives = 191/326 (58%), Gaps = 19/326 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ +G GG G S R KF GGPDGG+GGRGG V +++TL+DF + Sbjct: 3 RFVDRVVIHTWAGSGGNGCASIHRSKFKPLGGPDGGNGGRGGSVVFVVDPHVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H A G++GM NR GA G D+ + VP GT V +EDG L+ DL G R A GG Sbjct: 63 RPHITAPSGKQGMGNNRDGAAGADLEVKVPDGTVVLDEDG-RLLADLVGAGTRFQAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S T + P +A G G+ + + L+LK +AD+G+IG P+AGKS+ ++ ++ Sbjct: 122 RGGLGNAALASRTRKVPGFALLGEQGESRDLTLELKSVADVGLIGFPSAGKSSLVSVISA 181 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 AKPKIADYPFTTL PNLG+V G F +AD+PG+I A G G+G FL+H ER VL+ Sbjct: 182 AKPKIADYPFTTLVPNLGVVSVGEHAFTVADVPGLIPGASAGRGLGLDFLRHIERCAVLV 241 Query: 242 HIVSALEENVQAAYQCILD------ELSAYNSELR---------KKIEIVGLSQIDTVDS 286 H+V +V+ ILD EL+AY L+ ++ V L++ID D+ Sbjct: 242 HVVDC--TSVEPGRDPILDIAALEAELAAYTPTLQGDTTLGDFAERPRAVVLNKIDVPDA 299 Query: 287 DTLAR-KKNELATQCGQVPFEFSSIT 311 LA + +A + G F S++T Sbjct: 300 RELAEFVCDNIAAERGWPVFSVSTVT 325 >gi|212716703|ref|ZP_03324831.1| hypothetical protein BIFCAT_01638 [Bifidobacterium catenulatum DSM 16992] gi|212660407|gb|EEB20982.1| hypothetical protein BIFCAT_01638 [Bifidobacterium catenulatum DSM 16992] Length = 563 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 128/351 (36%), Positives = 201/351 (57%), Gaps = 21/351 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+++ GDGG G RREK+ GP+GG+GG GG V A N N+L+D+R+ Sbjct: 4 FVDRVTVHVKGGDGGNGSAGIRREKYKPLAGPNGGNGGDGGSVIFLADQNANSLLDYRFM 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI--------SLICDLDQEGQR 114 H +A G G+ + G+KG D++L VPVGT +FE G + DL G + Sbjct: 64 PHREAGSGTMGLGDTKDGSKGADLILPVPVGTVIFEAKGPQGKPKHPGEQLADLRHAGDK 123 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 ++A GGNGG GNA + T +AP +A G G+E+ + L+LK IAD+ ++G P+AGKS+ Sbjct: 124 FVVAAGGNGGLGNAALANRTRRAPGFALLGEPGEERDVILELKSIADVALVGFPSAGKSS 183 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +A+++ AKPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H Sbjct: 184 LIAAMSSAKPKIADYPFTTLVPNLGVVMAGDMRYTIADVPGLIPGASQGKGLGLEFLRHI 243 Query: 235 ERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + + + Y+ + EL+ Y +L ++ I+ L+++ Sbjct: 244 ERTEIIAHVIDCATLEPDRDPMSDYKALEHELAEYADKLELPLGAIPIPERPRIIILNKV 303 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 D ++ LA + G + S+ + G+ ++ L + +R E Sbjct: 304 DMPEAKELAEFVKPEFEKLGLNVYVISTASHEGLKELNWALAAMVADMRKE 354 >gi|289704624|ref|ZP_06501054.1| Obg family GTPase CgtA [Micrococcus luteus SK58] gi|289558657|gb|EFD51918.1| Obg family GTPase CgtA [Micrococcus luteus SK58] Length = 515 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 128/345 (37%), Positives = 203/345 (58%), Gaps = 19/345 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ +G+GG G +S REKF GGPDGG GG GGD+ S TL+D+ + Sbjct: 4 FVDRVVLHLTAGNGGHGCVSVHREKFKPLGGPDGGDGGDGGDITFVVDSQTTTLLDYHHA 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H A++G+ GM +R G G+ +VL VP GT V +E G +++ DL EG + A GG Sbjct: 64 PHRSAENGQPGMGDHREGKNGQSLVLPVPDGTVVKDEQG-NIVADLVGEGATYVAAAGGQ 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S +AP +A G+ G+ + + L++K +AD+ ++G P+AGKS+ +A+++ A Sbjct: 123 GGLGNAALASVKRKAPGFALLGLPGESRDLTLEIKTVADVALVGFPSAGKSSLIAALSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G F +AD+PG+I A +G G+G FL+H ER L+H Sbjct: 183 RPKIADYPFTTLVPNLGVVQAGDVRFTVADVPGLIPGASEGRGLGLEFLRHVERCAALVH 242 Query: 243 IVS--ALEENVQ--AAYQCILDELSAYNSE------------LRKKIEIVGLSQIDTVDS 286 ++ +LE + A ++ I EL AY E L ++ ++ L++ D D Sbjct: 243 VLDCGSLESDRDPIADFEAIEAELEAYAVEPVFSQGGEGVVPLNERPRLIALNKTDLPDG 302 Query: 287 DTLARK-KNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +A ++EL + +V F+ S++ G+ + + + + R Sbjct: 303 AAMADMVRDELEGRGLRV-FDISALAREGLDALKYAMAELVAEAR 346 >gi|283455285|ref|YP_003359849.1| GTP-binding protein, GTP1/OBG family [Bifidobacterium dentium Bd1] gi|309803015|ref|ZP_07697116.1| Obg family GTPase CgtA [Bifidobacterium dentium JCVIHMP022] gi|283101919|gb|ADB09025.1| GTP-binding protein, GTP1/OBG family [Bifidobacterium dentium Bd1] gi|308220482|gb|EFO76793.1| Obg family GTPase CgtA [Bifidobacterium dentium JCVIHMP022] Length = 563 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 131/351 (37%), Positives = 199/351 (56%), Gaps = 21/351 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+++ GDGG G RREK+ GP+GG+GG GG V A N N+L+D+R+ Sbjct: 4 FVDRVTVHVKGGDGGNGSAGIRREKYKPLAGPNGGNGGNGGSVIFLADQNANSLLDYRFM 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI--------SLICDLDQEGQR 114 H +A G G+ + G+KG D++L VPVGT +FE G + DL G R Sbjct: 64 PHREAGSGTMGLGDTKDGSKGADLILPVPVGTVIFEAKGPQGARKYPGEQLADLRHVGDR 123 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 + A GGNGG GNA + T +AP +A G G+E+ + L+LK IAD+ ++G P+AGKS+ Sbjct: 124 YVAAAGGNGGLGNAALANRTRRAPGFALLGEPGEERDVILELKSIADVALVGFPSAGKSS 183 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +A+++ AKPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H Sbjct: 184 LIAAMSSAKPKIADYPFTTLVPNLGVVMAGDSRYTIADVPGLIPGASQGKGLGLEFLRHI 243 Query: 235 ERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + + + Y+ + EL+ Y +L ++ IV L+++ Sbjct: 244 ERTEIIAHVIDCATLEPDRDPMSDYRALEHELAEYADKLELPLGAIPIPERPRIVILNKV 303 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 D ++ LA G F S+ + G+ ++ L + +R E Sbjct: 304 DMPEAKELAEFVKPEFEALGLKVFIISTASHEGLKELNWALAGLVADMRKE 354 >gi|225351138|ref|ZP_03742161.1| hypothetical protein BIFPSEUDO_02726 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158594|gb|EEG71836.1| hypothetical protein BIFPSEUDO_02726 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 563 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 127/349 (36%), Positives = 200/349 (57%), Gaps = 21/349 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+++ GDGG G RREK+ GP+GG+GG GG V A N N+L+D+R+ Sbjct: 4 FVDRVTVHVKGGDGGNGSAGIRREKYKPLAGPNGGNGGDGGSVIFMADQNANSLLDYRFM 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI--------SLICDLDQEGQR 114 H +A G G+ + G+KG D++L VPVGT +FE G + DL G + Sbjct: 64 PHREAGSGTMGLGDTKDGSKGADLILPVPVGTVIFEAKGPQGKPKHPGEQLADLRHAGDK 123 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 ++A GGNGG GNA + T +AP +A G G+E+ + L+LK IAD+ ++G P+AGKS+ Sbjct: 124 FVVAAGGNGGLGNAALANRTRRAPGFALLGEPGEERDVILELKSIADVALVGFPSAGKSS 183 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +A+++ AKPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H Sbjct: 184 LIAAMSSAKPKIADYPFTTLVPNLGVVMAGDMRYTIADVPGLIPGASQGKGLGLEFLRHI 243 Query: 235 ERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + + + Y+ + EL+ Y +L ++ I+ L+++ Sbjct: 244 ERTEIIAHVIDCATLEPDRDPMSDYKALEHELAEYADKLELPLGAIPIPERPRIIILNKV 303 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 D ++ LA + G + S+ + G+ ++ L + +R Sbjct: 304 DMPEAKELAEFVKPEFEKLGLNVYVISTASHEGLKELNWALAAMVADMR 352 >gi|171741358|ref|ZP_02917165.1| hypothetical protein BIFDEN_00439 [Bifidobacterium dentium ATCC 27678] gi|306823649|ref|ZP_07457024.1| GTP-binding protein [Bifidobacterium dentium ATCC 27679] gi|171276972|gb|EDT44633.1| hypothetical protein BIFDEN_00439 [Bifidobacterium dentium ATCC 27678] gi|304553356|gb|EFM41268.1| GTP-binding protein [Bifidobacterium dentium ATCC 27679] Length = 584 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 131/351 (37%), Positives = 199/351 (56%), Gaps = 21/351 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+++ GDGG G RREK+ GP+GG+GG GG V A N N+L+D+R+ Sbjct: 25 FVDRVTVHVKGGDGGNGSAGIRREKYKPLAGPNGGNGGNGGSVIFLADQNANSLLDYRFM 84 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI--------SLICDLDQEGQR 114 H +A G G+ + G+KG D++L VPVGT +FE G + DL G R Sbjct: 85 PHREAGSGTMGLGDTKDGSKGADLILPVPVGTVIFEAKGPQGARKYPGEQLADLRHVGDR 144 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 + A GGNGG GNA + T +AP +A G G+E+ + L+LK IAD+ ++G P+AGKS+ Sbjct: 145 YVAAAGGNGGLGNAALANRTRRAPGFALLGEPGEERDVILELKSIADVALVGFPSAGKSS 204 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +A+++ AKPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H Sbjct: 205 LIAAMSSAKPKIADYPFTTLVPNLGVVMAGDSRYTIADVPGLIPGASQGKGLGLEFLRHI 264 Query: 235 ERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + + + Y+ + EL+ Y +L ++ IV L+++ Sbjct: 265 ERTEIIAHVIDCATLEPDRDPMSDYRALEHELAEYADKLELPLGAIPIPERPRIVILNKV 324 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 D ++ LA G F S+ + G+ ++ L + +R E Sbjct: 325 DMPEAKELAEFVKPEFEALGLKVFIISTASHEGLKELNWALAGLVADMRKE 375 >gi|239917524|ref|YP_002957082.1| GTP-binding protein Obg/CgtA [Micrococcus luteus NCTC 2665] gi|239838731|gb|ACS30528.1| GTP-binding protein Obg/CgtA [Micrococcus luteus NCTC 2665] Length = 515 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 127/345 (36%), Positives = 204/345 (59%), Gaps = 19/345 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ +G+GG G +S REKF GGPDGG GG GGD+ + S TL+D+ + Sbjct: 4 FVDRVVLHLTAGNGGHGCVSVHREKFKPLGGPDGGDGGDGGDITLVVDSQTTTLLDYHHA 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H A++G+ GM +R G G+ +VL VP GT V +E G +++ DL EG + A GG Sbjct: 64 PHRSAENGQPGMGDHREGKNGQSLVLPVPDGTVVKDEQG-NIVADLVGEGATYVAAAGGQ 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S +AP +A G+ G+ + + L++K +AD+ ++G P+AGKS+ +A+++ A Sbjct: 123 GGLGNAALASVKRKAPGFALLGLPGESRDLTLEIKTVADVALVGFPSAGKSSLIAALSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G F +AD+PG+I A +G G+G FL+H ER L+H Sbjct: 183 RPKIADYPFTTLVPNLGVVQAGDVRFTVADVPGLIPGASEGRGLGLEFLRHVERCAALVH 242 Query: 243 IVS--ALEENVQ--AAYQCILDELSAYNSE------------LRKKIEIVGLSQIDTVDS 286 ++ +LE + A ++ I EL AY E L ++ ++ L++ D + Sbjct: 243 VLDCGSLESDRDPIADFEAIEAELEAYAVEPVFSQGGEGVVPLNERPRLIALNKTDLPEG 302 Query: 287 DTLARK-KNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +A ++EL + +V F+ S++ G+ + + + + R Sbjct: 303 AAMADMVRDELEGRGLRV-FDISALAREGLDALKYAMAELVAEAR 346 >gi|212696201|ref|ZP_03304329.1| hypothetical protein ANHYDRO_00737 [Anaerococcus hydrogenalis DSM 7454] gi|212676830|gb|EEB36437.1| hypothetical protein ANHYDRO_00737 [Anaerococcus hydrogenalis DSM 7454] Length = 340 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 96/247 (38%), Positives = 158/247 (63%), Gaps = 6/247 (2%) Query: 90 VPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQE 149 +PVGT + E +I D + G+ ++A GG GG GN H+KSST QAP +A G GQ+ Sbjct: 1 MPVGTIIRESTSGKIIKDFKKNGEEFLIAKGGRGGKGNVHYKSSTRQAPRFAQKGKEGQK 60 Query: 150 KIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEF 208 + L+LK++AD+G++GLPN GKST ++ +++AKPKIA+Y FTTL PNLG+VK + + F Sbjct: 61 ITVNLELKILADVGLVGLPNVGKSTLISVISKAKPKIANYHFTTLDPNLGVVKIDKERSF 120 Query: 209 ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SALE-ENVQAAYQCILDELSAY 265 I+ADIPG+I+ A++G G+G FLKH +R +L+H+V S E + ++ I +EL + Sbjct: 121 IVADIPGLIEGANEGLGLGHDFLKHVQRCKILVHLVDISGFEGRDPIEDFELINNELKLF 180 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDK 325 + L K +I+ L++ D ++ R +++ + + F S+ T GI ++++ + + Sbjct: 181 DENLADKYQIIALNKSDLDSNENYKRFEDKYSDKYK--IFRISAATTSGIKELIDEVSNV 238 Query: 326 IFSIRGE 332 ++S E Sbjct: 239 LYSFDDE 245 >gi|312601010|gb|ADQ90265.1| GTPase obg [Mycoplasma hyopneumoniae 168] Length = 367 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 98/232 (42%), Positives = 147/232 (63%), Gaps = 5/232 (2%) Query: 53 LNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEG 112 +NTL+ F + +GE G + ++GA G+D+ + VP+GTQVF + SLICD+ E Sbjct: 1 MNTLLPFYQTKKIFGYNGENGRPKRQTGANGKDIFIKVPLGTQVFLKK--SLICDIILE- 57 Query: 113 QRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGK 172 ++ ++A GG GG GN HF++S N+AP + G LGQ + L+LK++ADIG++G PNAGK Sbjct: 58 KKYLIAKGGRGGLGNFHFRNSKNKAPRISENGELGQNFYLDLQLKVMADIGLVGKPNAGK 117 Query: 173 STFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLK 232 ST L+ ++ +KPKIA+Y FTTL P LG+VK F+ AD+PG+I+ A G G+G FLK Sbjct: 118 STLLSLISNSKPKIANYEFTTLVPQLGVVKIYENSFVTADLPGLIQGASSGKGMGIIFLK 177 Query: 233 HTERTHVLLHIVSALEENVQAA--YQCILDELSAYNSELRKKIEIVGLSQID 282 H ER ++H++ +N + I EL +N +L +IV ++ D Sbjct: 178 HIERCRAIVHVIDFGSDNKNPIKDFIEIKSELEKFNKKLLDLNQIVIANKCD 229 >gi|148229103|ref|NP_001090282.1| GTP binding protein 5 (putative) [Xenopus laevis] gi|71051155|gb|AAH99033.1| Gtpbp5 protein [Xenopus laevis] Length = 406 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 118/319 (36%), Positives = 184/319 (57%), Gaps = 10/319 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +V + +G GG G F E E+GGPDGG GG GG + ++A + +L Sbjct: 75 FVDHRRVRVVAGAGGNGACCFHSEPRKEYGGPDGGDGGNGGHIILKADPRVKSLSTV--T 132 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +K +GE+G N G G+ + + VP+GT V EE L+ DL + G + A GG Sbjct: 133 PLYKGSNGERGRSDNCFGRNGDSIYIRVPLGTLVKEEG--KLLADLSKPGDEFLAAHGGV 190 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S+ N+AP A PG G+E+I+ L+LK +A G++G PNAGKS+ L ++ A Sbjct: 191 GGKGNRFFLSNENRAPMMATPGEPGEERILHLELKTMAHAGMVGFPNAGKSSLLRLLSNA 250 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P +A YPFTTL P++G++K Y + +ADIPGII AHQ G+G FL+H ER +LL Sbjct: 251 RPAVAAYPFTTLNPHVGVIKYRDYVQIAVADIPGIIDGAHQNRGLGFAFLRHIERCRILL 310 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID-TVDSDTLARKKNELATQC 300 ++ + A + + EL Y+ +L + +++ +++D V +TL R + E ++ Sbjct: 311 FVLDLSHKEPWAQLESLRYELEQYDKDLLGRPQVIVANKLDLPVAQETLQRLRQETDSKV 370 Query: 301 GQVPFEFSSITGHGIPQIL 319 V S++TG +++ Sbjct: 371 IGV----SALTGENAEELI 385 >gi|12045245|ref|NP_073056.1| GTPase ObgE [Mycoplasma genitalium G37] gi|255660409|ref|ZP_05405818.1| GTPase ObgE [Mycoplasma genitalium G37] gi|1351567|sp|P47624|OBG_MYCGE RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|3844973|gb|AAC71611.1| GTPase1 Obg [Mycoplasma genitalium G37] gi|166078845|gb|ABY79463.1| GTPase1 Obg [synthetic Mycoplasma genitalium JCVI-1.0] Length = 433 Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 125/341 (36%), Positives = 199/341 (58%), Gaps = 7/341 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M D + +G+GG G I+++RE + GGP GG+GG GG+V +QA N ++L + Sbjct: 1 MAITDYCECRFTAGNGGNGIIAWKREAHYDKGGPGGGNGGNGGNVILQADHNCDSLFFLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++H A+ G+ G G G D+++ VP+GT V + S++ D + Q IL G Sbjct: 61 NKKHLFAEDGQNGKPDLAHGKNGSDLLIKVPIGTTVKNLENNSVLVDFVHDKQSFILCFG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GNA FKS +AP G G+ + L++K +A++GI+G PN+GKST ++ ++ Sbjct: 121 GKGGKGNAAFKSPIMRAPNLYENGDKGEILNVSLEVKYLANVGIVGFPNSGKSTLISKLS 180 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIA+Y FTTL P LG+VK + ADIPG+I+NA +G+G+G FL+H ER +L Sbjct: 181 NAKPKIANYRFTTLIPVLGVVKYQNNSLVFADIPGLIENASEGSGLGHDFLRHIERCEIL 240 Query: 241 LHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +H++S ++ AY I+DELS Y+ L KK +V ++ID + + +K + Sbjct: 241 IHLISLDPVDNDDPCKAYLQIMDELSKYSPLLVKKKMLVVANKIDVNEGEKRFKKLEKFL 300 Query: 298 TQCGQVPFEFSSIT---GHGIPQILECLHDKIFSIRGENEF 335 + + S++ G+ + ++ E L++K S G N+F Sbjct: 301 QKKSISVLKISALKKELGNLLDRVFE-LYNKTISQFGANKF 340 >gi|307266919|ref|ZP_07548438.1| GTP-binding protein Obg/CgtA [Thermoanaerobacter wiegelii Rt8.B1] gi|306918076|gb|EFN48331.1| GTP-binding protein Obg/CgtA [Thermoanaerobacter wiegelii Rt8.B1] Length = 339 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 101/245 (41%), Positives = 149/245 (60%), Gaps = 3/245 (1%) Query: 88 LTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILG 147 + VPVGT + ++ +I DL + Q+ I+ GG GG GN F +ST + P +A G G Sbjct: 3 IKVPVGTLIINDETGEIIADLVKPNQKAIVLRGGKGGRGNTKFATSTLKTPRFAESGEKG 62 Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE 207 +E + L+LKL+AD+G+IG PNAGKST LAS TRAKPKIA+YPFTTL PNLG+V+ K Sbjct: 63 KEMWVRLELKLLADVGLIGFPNAGKSTLLASCTRAKPKIANYPFTTLTPNLGVVEYKGKS 122 Query: 208 FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSA 264 F++ADIPG+I+ AH G G+G FL+H ERT +L+H+V+ + ++ I +EL Sbjct: 123 FVMADIPGLIEGAHIGEGLGHDFLRHIERTKMLIHVVNVSGNEGRDPIEDFEKINEELKL 182 Query: 265 YNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 Y+ L +IV ++ID + + G + S++T GI ++L+ + Sbjct: 183 YSERLLTLPQIVAANKIDLQSGRENYPDFEKEIKKRGYDVYPISALTKEGIDKLLDKTIE 242 Query: 325 KIFSI 329 + SI Sbjct: 243 ILSSI 247 >gi|183601871|ref|ZP_02963240.1| GTPase ObgE [Bifidobacterium animalis subsp. lactis HN019] gi|219682785|ref|YP_002469168.1| GTPase ObgE [Bifidobacterium animalis subsp. lactis AD011] gi|241190361|ref|YP_002967755.1| GTPase ObgE [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195767|ref|YP_002969322.1| GTPase ObgE [Bifidobacterium animalis subsp. lactis DSM 10140] gi|261266676|sp|B8DVU1|OBG_BIFA0 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|183218756|gb|EDT89398.1| GTPase ObgE [Bifidobacterium animalis subsp. lactis HN019] gi|219620435|gb|ACL28592.1| GTP-binding protein Obg/CgtA [Bifidobacterium animalis subsp. lactis AD011] gi|240248753|gb|ACS45693.1| GTPase ObgE [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250321|gb|ACS47260.1| GTPase ObgE [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793348|gb|ADG32883.1| GTPase ObgE [Bifidobacterium animalis subsp. lactis V9] Length = 570 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 129/351 (36%), Positives = 199/351 (56%), Gaps = 21/351 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+++ GDGG G RREK+ GP+GG+GG+GG V ++A N +L+DFR+ Sbjct: 4 FVDRVTVHVKGGDGGNGSAGIRREKYKPLAGPNGGNGGKGGSVILKADQNATSLLDFRFM 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI--------SLICDLDQEGQR 114 H A G G+ + G+ G D+VL VPVGT VFE G +++ DL G Sbjct: 64 PHRTADSGTMGLGDTKDGSNGADLVLPVPVGTVVFEARGAQGFPKKPGAVLADLRHAGDT 123 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 + A GG GG GNA + T +AP +A G G E+ I L+LK IAD+ ++G P+AGKS+ Sbjct: 124 YVAAAGGAGGLGNAALANRTRRAPGFALLGEPGDERDIILELKSIADVALVGFPSAGKSS 183 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +A+++ AKPKIADYPFTTL PNLG+V+ G + +AD+PG+I A QG G+G FL+H Sbjct: 184 LIAAMSAAKPKIADYPFTTLVPNLGVVQAGDMRYTIADVPGLIPGASQGKGLGLTFLRHI 243 Query: 235 ERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + + + + Y + EL Y +L ++ ++ L++I Sbjct: 244 ERTEIIAHVIDCVTIDPDRDPLSDYYALEKELGEYADDLDLPLGAIPIPERPRVIILNKI 303 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 D D+ LA + +E S+ + G+ ++ L + +R + Sbjct: 304 DVPDAKELADFVRPEFEKLDLPVYEISTASHAGLKELNFALAKLVKEMRAQ 354 >gi|220912891|ref|YP_002488200.1| GTPase ObgE [Arthrobacter chlorophenolicus A6] gi|261266661|sp|B8H9P2|OBG_ARTCA RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|219859769|gb|ACL40111.1| GTP-binding protein Obg/CgtA [Arthrobacter chlorophenolicus A6] Length = 529 Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 134/336 (39%), Positives = 194/336 (57%), Gaps = 25/336 (7%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ G GG G +S REKF GGPDGG+GG GGDV ++ TL+D+ + Sbjct: 4 FVDRVVLHVSGGTGGHGCVSVHREKFKPLGGPDGGNGGNGGDVILRVDHQTTTLLDYHHA 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H A +G GM R G GE +VL VP GT V +DG +++ DL EG I A GG Sbjct: 64 PHRHATNGGPGMGDWRGGKNGETLVLPVPDGTVVKSKDG-TVLADLVGEGTEYIAAAGGP 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S +AP +A GI G+ I L+LK IADI ++G P+AGKS+ +A+++ A Sbjct: 123 GGLGNAALSSQKRRAPGFALLGIEGESSDIVLELKSIADIALVGFPSAGKSSLIAAMSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G F +AD+PG+I+ A +G G+G FL+H ER L+H Sbjct: 183 RPKIADYPFTTLIPNLGVVQAGDVRFTIADVPGLIEGASEGKGLGHNFLRHVERCAALVH 242 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRK-------------------KIEIVGLSQIDT 283 + L+ + + L +LS +EL K + +V L+++D Sbjct: 243 V---LDCGTLESDRDPLSDLSIIETELEKYAVDMSYAGQDGEVVPLNHRPRLVALNKVDL 299 Query: 284 VDSDTLAR-KKNELATQCGQVPFEFSSITGHGIPQI 318 D +A + EL ++ +V FE S+ + G+ Q+ Sbjct: 300 PDGKDMAEFVRPELESRGYRV-FEVSATSHEGLRQL 334 >gi|72008805|ref|XP_784849.1| PREDICTED: similar to GTP binding protein 5 [Strongylocentrotus purpuratus] gi|115974066|ref|XP_001190951.1| PREDICTED: similar to GTP binding protein 5 [Strongylocentrotus purpuratus] Length = 390 Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 111/287 (38%), Positives = 174/287 (60%), Gaps = 5/287 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +V + G+GG G +S RRE +EFGGPDGG GG GG V ++ +L +L R Sbjct: 46 FVDWRRVRVAGGNGGDGCVSVRREAHVEFGGPDGGDGGNGGHVILECEQSLKSL--ERVL 103 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++ + G KG +NR G G+ V+ VP+GT V E + I I DL+ E +LA GG Sbjct: 104 PLYRGEAGGKGKSQNRHGRNGKHNVIKVPLGTLVKENNVI--IKDLENEHDMFMLAAGGE 161 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++ ++ P G G+E+++ L+L+ +A +G+IG PNAGKST L +++RA Sbjct: 162 GGRGNRSFMTAQHKTPMMGTCGTPGEERVLHLELRTMAHVGLIGFPNAGKSTLLRALSRA 221 Query: 183 KPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P +A YPFTTL P++G+V + ++ +ADIPG+I+ AHQ G+G FL+H ER LL Sbjct: 222 RPAVAAYPFTTLNPHVGMVIYDDMEQVAVADIPGLIRGAHQNRGLGHSFLRHIERCRCLL 281 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT 288 +++ ++ + + EL Y L ++ + +++D +S T Sbjct: 282 YVIDLSVKDPWSQLSDLRYELEQYLPGLSERPHAIVGNKMDLKESRT 328 >gi|116670935|ref|YP_831868.1| GTPase ObgE [Arthrobacter sp. FB24] gi|261266662|sp|A0JXJ8|OBG_ARTS2 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|116611044|gb|ABK03768.1| GTP1/OBG sub domain protein [Arthrobacter sp. FB24] Length = 529 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 133/336 (39%), Positives = 193/336 (57%), Gaps = 25/336 (7%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ G GG G +S REKF GGPDGG+GG GGDV ++ TL+D+ + Sbjct: 4 FVDRVVLHVSGGTGGHGCVSVHREKFKPLGGPDGGNGGDGGDVILRVDPQTTTLLDYHHA 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H A +G GM R G GE ++L VP GT V +DG ++ DL EG I A GG Sbjct: 64 PHRHATNGGPGMGDWRGGKNGETLILPVPEGTVVKTKDG-RVLADLVGEGTEFIAAAGGP 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S +AP +A GI G+ I L+LK IADI ++G P+AGKS+ +A+++ A Sbjct: 123 GGLGNAALSSQKRRAPGFALLGIEGESSDIVLELKSIADIALVGFPSAGKSSLIAAMSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G F +AD+PG+I+ A +G G+G FL+H ER L+H Sbjct: 183 RPKIADYPFTTLIPNLGVVQAGDVRFTIADVPGLIEGASEGKGLGHHFLRHVERCAALVH 242 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRK-------------------KIEIVGLSQIDT 283 + L+ A + L +L+ +EL K + +V L+++D Sbjct: 243 V---LDCGTLEADRDPLSDLAIIEAELEKYAVDMSYAGTDGEVVPLNHRPRLVALNKVDL 299 Query: 284 VDSDTLAR-KKNELATQCGQVPFEFSSITGHGIPQI 318 D +A + EL ++ +V FE S+ + G+ Q+ Sbjct: 300 PDGKDMAEFVRPELESRGYRV-FEISATSHEGLRQL 334 >gi|119960850|ref|YP_948099.1| GTPase ObgE [Arthrobacter aurescens TC1] gi|261266660|sp|A1R787|OBG_ARTAT RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|119947709|gb|ABM06620.1| putative GTPase of unknown function [Arthrobacter aurescens TC1] Length = 528 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 131/332 (39%), Positives = 191/332 (57%), Gaps = 17/332 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ G GG G +S +REKF GGPDGG+GG GGDV ++ ++ TL+D+ + Sbjct: 4 FVDRVVLHVSGGTGGHGCVSVKREKFKPLGGPDGGNGGNGGDVILRVSAQTTTLLDYHHA 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H A +G GM R G GE ++L VP GT V +DG ++ DL EG I A GG Sbjct: 64 PHRHATNGGPGMGDWRGGKNGETLILPVPDGTVVKTKDG-EVLADLVGEGTEYIAAAGGQ 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA S +AP +A GI G+ I L+LK IADI ++G P+AGKS+ +A+++ A Sbjct: 123 GGLGNASLSSQKRRAPGFALLGIEGESSDIVLELKSIADIALVGFPSAGKSSLIAAMSAA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIADYPFTTL PNLG+V+ G F +AD+PG+I+ A +G G+G FL+H ER L+H Sbjct: 183 RPKIADYPFTTLIPNLGVVQAGDVRFTIADVPGLIEGASEGKGLGHNFLRHVERCAALVH 242 Query: 243 IVS--ALEENVQ--AAYQCILDELSAYNSE------------LRKKIEIVGLSQIDTVDS 286 ++ LE + + I EL Y + L ++ ++V L+++D D Sbjct: 243 VLDCGTLESDRDPLSDLAIIEAELEKYAVDMSYAGVDGEVVPLNERPKLVVLNKVDLPDG 302 Query: 287 DTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 +A G FE S+ + G+ Q+ Sbjct: 303 KDMAEFVRPDLEARGYRVFEVSATSHEGLRQL 334 >gi|73992679|ref|XP_534473.2| PREDICTED: similar to GTP binding protein 5 [Canis familiaris] Length = 383 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 119/283 (42%), Positives = 170/283 (60%), Gaps = 9/283 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTL--IDFR 60 F+D +V +R G GG G F E EFGGPDGG GG GG V ++A + +L + R Sbjct: 55 FVDHRRVLVRGGRGGDGASCFHSEPRKEFGGPDGGDGGSGGHVVLRADQQVKSLSSVLSR 114 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ HGE G ++N SG G + + VPVGT V ++G ++ DL G + A G Sbjct: 115 YQ----GSHGEAGGRKNCSGRSGTLLYVPVPVGTLV--KEGNKVVADLSCPGDEYVAALG 168 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F ++ N+AP PG GQE++++L+LK++A G++G PNAGKS+ L +++ Sbjct: 169 GAGGKGNRFFLANDNRAPVTCTPGQPGQERVLFLELKMVAHAGMVGFPNAGKSSLLRAIS 228 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P +A YPFTTL P++GIV E +++ +ADIPGII+ AHQ G+G FL+H ER Sbjct: 229 NARPTVASYPFTTLKPHVGIVHCEDHQQIAVADIPGIIRGAHQNRGLGSTFLRHIERCRF 288 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 LL IV E + + EL Y + L K+ +V ++ID Sbjct: 289 LLFIVDLSEPEPWTQVEDLKFELEKYEAGLSKRPHVVVANKID 331 >gi|312379939|gb|EFR26075.1| hypothetical protein AND_08071 [Anopheles darlingi] Length = 371 Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 131/324 (40%), Positives = 185/324 (57%), Gaps = 12/324 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY- 61 F+D V G+GG G ISF R E GPDGG GG GG V +QAT ++ DF + Sbjct: 34 FVDCRPVRAIGGNGGDGCISFLRLWCNENAGPDGGDGGNGGHVVLQATQDVR---DFNHI 90 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 +A +GEKG ++ G V+ VP+GT V E G ++ DL EG + A GG Sbjct: 91 TTLLRADNGEKGATKDCHGRNANHTVVKVPLGTIVKNEQG-KVVGDLSDEGMMFVAARGG 149 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN FKS QAP A G G+E L+L+ +A IG IGLPNAGKST L +++R Sbjct: 150 AGGKGNQFFKSDLEQAPQVAELGANGEEMAYTLELRSMAHIGFIGLPNAGKSTLLRAISR 209 Query: 182 AKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PK+A YPFTTL P+LG+V+ + Y++ +AD+PG+IK++H+ G+G FLKH ER + L Sbjct: 210 ARPKVAPYPFTTLKPHLGMVQYDDYEQIAVADLPGLIKDSHRNKGLGINFLKHAERCNAL 269 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L +V A + YQ +L EL ++ EL ++ ++ ++ID + A + EL Sbjct: 270 LFVVDASADEPWLHYQTLLHELGMFSEELLERPRLLVANKIDLPE----AERNLELLAHH 325 Query: 301 GQVPFEFSSITGHGIPQILECLHD 324 +P I+ I E LH+ Sbjct: 326 VDIP--VLPISARMSVNIAELLHE 347 >gi|327271876|ref|XP_003220713.1| PREDICTED: GTP-binding protein 5-like [Anolis carolinensis] Length = 504 Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 123/326 (37%), Positives = 186/326 (57%), Gaps = 14/326 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D KV + +G GG G F E +GGPDGG GG GG + ++ + +L Sbjct: 170 FVDHRKVRLTAGKGGDGISCFHSEPRKIYGGPDGGDGGDGGHIILKVDQQVKSLASL--L 227 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++ +GEKG +N GA G+ + L VP+GT V E++ I + DL+Q G+ + GG Sbjct: 228 PLYRGFNGEKGGSKNCYGAAGKSIYLKVPIGTVVKEDNEI--VADLNQHGEEYVAVYGGT 285 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++ N+AP A G G+E+++ L+LK +A G++G PNAGKS+ L +++ A Sbjct: 286 GGKGNRFFLANDNRAPTMATEGEPGEERVLNLELKTMAHAGMVGFPNAGKSSLLRAISNA 345 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP +A YPFTTL P++GIV EGY++ +AD+PGIIK AHQ G+G FLKH ER LL Sbjct: 346 KPAVASYPFTTLNPHVGIVHYEGYEQVSVADVPGIIKGAHQNRGLGLAFLKHIERCRFLL 405 Query: 242 HIVSALEENVQAAYQCILD---ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ L+ +V + + D EL Y L K+ + +++D + + L Sbjct: 406 YV---LDLSVPEPWTQLRDLKYELEQYEEGLSKRPHAIIGNKLDLPQAKS---NLPLLKE 459 Query: 299 QCGQVPFEFSSITGHGIPQILECLHD 324 Q Q S++TG + ++L L D Sbjct: 460 QVEQRVIPLSALTGDNLEELLLHLKD 485 >gi|311063693|ref|YP_003970418.1| GTP-binding protein, GTP1/OBG family ObgE [Bifidobacterium bifidum PRL2010] gi|310866012|gb|ADP35381.1| ObgE GTP-binding protein, GTP1/OBG family [Bifidobacterium bifidum PRL2010] Length = 561 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 128/351 (36%), Positives = 199/351 (56%), Gaps = 21/351 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+++ GDGG G RREK+ GP+GG+GG GG V A +N +L+D+R+ Sbjct: 4 FVDRVTVHVKGGDGGNGSAGIRREKYKPLAGPNGGNGGNGGSVVFVADTNATSLLDYRFM 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI--------SLICDLDQEGQR 114 H A G G+ + G+KG D++L VP+GT +F G + DL G + Sbjct: 64 PHRNAGDGTMGLGDVKDGSKGADLILPVPLGTVIFAAVGAQGRPKRPGEQLADLRHNGDK 123 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 + A GG GG GNA + T +AP +A G G+E+ + L+LK IAD+ ++G P+AGKS+ Sbjct: 124 FVAAAGGAGGLGNAALANKTRRAPGFALLGEPGEERDVILELKSIADVALVGFPSAGKSS 183 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +A+++ AKPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H Sbjct: 184 LIAAMSAAKPKIADYPFTTLVPNLGVVVAGDHRYTIADVPGLIPGASQGKGLGLEFLRHI 243 Query: 235 ERTHVLLHIV--SALE--ENVQAAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + LE + + Y + EL+ Y +L ++ I+ L+++ Sbjct: 244 ERTEIIAHVIDCATLEPGRDPVSDYHALEHELAEYADKLELPLGAIPIPERPRIIVLNKV 303 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 D ++ LA + G FE S+ + G+ ++ L + +R E Sbjct: 304 DVPEAKELADFVRPDFERMGLKVFEISTASHEGLKELNFALAAMVADMRQE 354 >gi|224282352|ref|ZP_03645674.1| GTPase ObgE [Bifidobacterium bifidum NCIMB 41171] gi|313139496|ref|ZP_07801689.1| GTP-binding protein [Bifidobacterium bifidum NCIMB 41171] gi|313132006|gb|EFR49623.1| GTP-binding protein [Bifidobacterium bifidum NCIMB 41171] Length = 561 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 128/351 (36%), Positives = 199/351 (56%), Gaps = 21/351 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+++ GDGG G RREK+ GP+GG+GG GG V A +N +L+D+R+ Sbjct: 4 FVDRVTVHVKGGDGGNGSAGIRREKYKPLAGPNGGNGGNGGSVVFVADTNATSLLDYRFM 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI--------SLICDLDQEGQR 114 H A G G+ + G+KG D++L VP+GT +F G + DL G + Sbjct: 64 PHRNAGDGTMGLGDVKDGSKGADLILPVPLGTVIFAAVGAQGRPKRPGEQLADLRHNGDK 123 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 + A GG GG GNA + T +AP +A G G+E+ + L+LK IAD+ ++G P+AGKS+ Sbjct: 124 FVAAAGGAGGLGNAALANKTRRAPGFALLGEPGEERDVILELKSIADVALVGFPSAGKSS 183 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +A+++ AKPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H Sbjct: 184 LIAAMSAAKPKIADYPFTTLVPNLGVVVAGDHRYTIADVPGLIPGASQGKGLGLEFLRHI 243 Query: 235 ERTHVLLHIV--SALE--ENVQAAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + LE + + Y + EL+ Y +L ++ I+ L+++ Sbjct: 244 ERTEIIAHVIDCATLEPGRDPVSDYHALEHELAEYADKLELPLGAIPIPERPRIIVLNKV 303 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 D ++ LA + G FE S+ + G+ ++ L + +R E Sbjct: 304 DVPEAKELADFVRPDFERMGLKVFEISTASHEGLKELNFALAAMVADMRQE 354 >gi|310286797|ref|YP_003938055.1| GTPase ObgE [Bifidobacterium bifidum S17] gi|309250733|gb|ADO52481.1| GTPase ObgE [Bifidobacterium bifidum S17] Length = 561 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 128/351 (36%), Positives = 199/351 (56%), Gaps = 21/351 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V+++ GDGG G RREK+ GP+GG+GG GG V A +N +L+D+R+ Sbjct: 4 FVDRVTVHVKGGDGGNGSAGIRREKYKPLAGPNGGNGGNGGSVVFVADTNATSLLDYRFM 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI--------SLICDLDQEGQR 114 H A G G+ + G+KG D++L VP+GT +F G + DL G + Sbjct: 64 PHRNAGDGTMGLGDVKDGSKGADLILPVPLGTVIFAAVGAQGRPKRPGEQLADLRHNGDK 123 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 + A GG GG GNA + T +AP +A G G+E+ + L+LK IAD+ ++G P+AGKS+ Sbjct: 124 FVAAAGGAGGLGNAALANKTRRAPGFALLGEPGEERDVILELKSIADVALVGFPSAGKSS 183 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +A+++ AKPKIADYPFTTL PNLG+V G + +AD+PG+I A QG G+G FL+H Sbjct: 184 LIAAMSAAKPKIADYPFTTLVPNLGVVVAGDHRYTIADVPGLIPGASQGKGLGLEFLRHI 243 Query: 235 ERTHVLLHIV--SALE--ENVQAAYQCILDELSAYNSELR---------KKIEIVGLSQI 281 ERT ++ H++ + LE + + Y + EL+ Y +L ++ I+ L+++ Sbjct: 244 ERTEIIAHVIDCATLEPGRDPVSDYHALEHELAEYADKLELPLGAIPIPERPRIIVLNKV 303 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 D ++ LA + G FE S+ + G+ ++ L + +R E Sbjct: 304 DVPEAKELADFVRPDFERMGLKVFEISTASHEGLKELNFALAAMVADMRQE 354 >gi|149191621|ref|ZP_01869865.1| GTPase ObgE [Vibrio shilonii AK1] gi|148834521|gb|EDL51514.1| GTPase ObgE [Vibrio shilonii AK1] Length = 196 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 101/196 (51%), Positives = 145/196 (73%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA V +++GDGG+G +SF REKF+ GGPDGG GG GGD++I+A NLNTLID+R Sbjct: 1 MKFVDEAVVKVQAGDGGSGVVSFWREKFVAKGGPDGGDGGDGGDIYIEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +Q+ ++A+ GE G N +G +G+D VL VPVGT+ + ++ ++ + G+++++A G Sbjct: 61 FQRFYEAERGENGRGGNCTGKRGKDKVLKVPVGTRAVDIHTNEIVAEVAEHGKKVMVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+ + + L+L L+AD+G++GLPNAGKSTF+ +V+ Sbjct: 121 GWHGLGNTRFKSSVNRAPRPKTLGTKGEIRELRLELLLLADVGMLGLPNAGKSTFIRAVS 180 Query: 181 RAKPKIADYPFTTLYP 196 AKPK+ADYPFTTL P Sbjct: 181 AAKPKVADYPFTTLIP 196 >gi|256371570|ref|YP_003109394.1| GTP-binding protein Obg/CgtA [Acidimicrobium ferrooxidans DSM 10331] gi|256008154|gb|ACU53721.1| GTP-binding protein Obg/CgtA [Acidimicrobium ferrooxidans DSM 10331] Length = 422 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 125/292 (42%), Positives = 185/292 (63%), Gaps = 2/292 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A+++ R+GDGGAG +SFRRE ++ GGPDGG GG GG V++Q + +LI FR Q Sbjct: 4 FVDRAQLHARAGDGGAGAVSFRREAHVDRGGPDGGDGGDGGSVFVQGDEGVASLIAFRDQ 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +A+ G+ G + R G +G D+V+ +P+GT V + +G L LD R+ +A GG Sbjct: 64 PFRRAEDGQHGRGQRRHGRRGRDLVVRLPLGTVVRDGEGNVLAEILDTT-TRVEIARGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA F S+ +AP +A G G ++ + L+LKL+AD+ ++G PNAGKS+ + +T A Sbjct: 123 GGQGNARFLSNRRRAPAFAEQGEHGDDRWVNLELKLVADVALVGPPNAGKSSLVGVLTNA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKI DYPFTTL P LG+V+ G +EF++AD+PG+I+ A +G G+G FL+H ER V Sbjct: 183 RPKIGDYPFTTLEPTLGVVRRGPEREFVIADVPGLIEGASEGRGLGHAFLRHVERARVCA 242 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 +V A + L EL AY LR++ +V L + D VD + ++ Sbjct: 243 VVVDAASAAPERDAATTLHELHAYAPWLRERPTVVVLQKADLVDDRAMVAER 294 >gi|157115815|ref|XP_001658295.1| Putative GTP-binding protein 5 [Aedes aegypti] gi|108883465|gb|EAT47690.1| Putative GTP-binding protein 5 [Aedes aegypti] Length = 383 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 128/320 (40%), Positives = 184/320 (57%), Gaps = 9/320 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V G GG G ISF R E GPDGG GG GG V +QATS++ L Sbjct: 51 FVDCKHVRAVGGKGGDGCISFLRLWCNENAGPDGGDGGNGGHVVLQATSDVRDL--NHVT 108 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 A G+KG ++ G V+ VP+GT V +G ++ DLD EG I A GG Sbjct: 109 TLLSADEGDKGRNKDCHGKNASHTVVKVPLGTIVKTSNG-KVVGDLDSEGTMFIAARGGA 167 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S QAP A G G++K L+L+ +A +G IGLPNAGKST L +++RA Sbjct: 168 GGKGNHFFISDLEQAPQVAEFGGQGEDKSYILELRSMAHVGFIGLPNAGKSTLLRAISRA 227 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PK+A YPFTTL P+LG+V+ + Y++ +AD+PG+I ++H+ G+G +FLKH ER +VLL Sbjct: 228 RPKVASYPFTTLKPHLGMVQYDDYEQIAVADLPGLIPDSHKNKGLGIQFLKHAERCNVLL 287 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V E YQ ++ EL+ ++ EL + +++ ++ID + A K EL Sbjct: 288 FVVDVSSEEPWNHYQTLMHELTMFSEELADRPKMIIANKIDLPE----AEKNLELLQHHV 343 Query: 302 QVP-FEFSSITGHGIPQILE 320 VP S+ G + ++L+ Sbjct: 344 DVPVIPISAKLGTNVSELLK 363 >gi|218508941|ref|ZP_03506819.1| GTPase ObgE [Rhizobium etli Brasil 5] Length = 155 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 96/131 (73%), Positives = 107/131 (81%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGGAG +SFRREKFIEFGGPDGG GGRGGDVW++ + LNTLIDFR Sbjct: 1 MKFLDEAKVYIRSGDGGAGSVSFRREKFIEFGGPDGGDGGRGGDVWVETVNGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQQHFKA G GM RNR+GA G DV L VPVGTQ+FEED +LICDL EGQR +A Sbjct: 61 YQQHFKATIGTHGMGRNRTGANGSDVTLKVPVGTQIFEEDRETLICDLTVEGQRYCIAHA 120 Query: 121 GNGGFGNAHFK 131 GNG F +AH++ Sbjct: 121 GNGCFWHAHYR 131 >gi|254232575|ref|ZP_04925902.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis C] gi|124601634|gb|EAY60644.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis C] Length = 484 Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 124/323 (38%), Positives = 182/323 (56%), Gaps = 14/323 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ R+G GG G S REKF GGPDGG+GGRGG + ++TL+DF + Sbjct: 8 RFVDRVVIHTRAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDFHF 67 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H A G+ GM NR GA G D+ + VP GT V +E+G L+ DL G R A GG Sbjct: 68 RPHLTAASGKHGMGNNRDGAAGADLEVKVPEGTVVLDENG-RLLADLVGAGTRFEAAAGG 126 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G GQ + + L+LK +AD+G++G P+AGKS+ +++++ Sbjct: 127 RGGLGNAALASRVRKAPGFALLGEKGQSRDLTLELKTVADVGLVGFPSAGKSSLVSAISG 186 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 + ++ADYP TTL PNLG+V G F +AD+PG+I A +G G+G FL+H ER VL+ Sbjct: 187 GQLRLADYPVTTLVPNLGVVSAGEHAFTVADVPGLIPGASRGRGLGLDFLRHIERCAVLV 246 Query: 242 HIVSALE----ENVQAAYQCILDELSAYNS---------ELRKKIEIVGLSQIDTVDSDT 288 H+V + + + EL+ Y +L + V L++ID ++ Sbjct: 247 HVVDCATAEPGRDPISDIDALETELACYTPTLQGDAALGDLAARPRAVVLNKIDVPEARE 306 Query: 289 LARKKNELATQCGQVPFEFSSIT 311 LA + Q G F S+ T Sbjct: 307 LAEFVRDDIAQRGWPVFCVSTAT 329 >gi|326430654|gb|EGD76224.1| hypothetical protein PTSG_00927 [Salpingoeca sp. ATCC 50818] Length = 470 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 114/326 (34%), Positives = 178/326 (54%), Gaps = 20/326 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +V++R G GG G S+ + PDG GGRGG V + + +L Sbjct: 70 FVDLRRVFVRGGKGGLGCFSYENLGYKRKRRPDGADGGRGGSVNLTVDETVGSL------ 123 Query: 63 QHFKAQ----HGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 +H A G +G N+ GA + + VP GT V++EDG ++ DL++ G+ A Sbjct: 124 EHIPATISGITGGQGSSNNKLGANAKPRTIKVPAGTIVYDEDG-KVVADLERPGESFCAA 182 Query: 119 PGGNGGFGNAHFKSSTNQAPY--YANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFL 176 GG GG GN+ T + A G G+EK L+LK +AD+G++G+PNAGKSTFL Sbjct: 183 VGGKGGRGNSGGLKHTRCVSFDDEAKQGTPGEEKRFVLELKTLADVGLVGMPNAGKSTFL 242 Query: 177 ASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTE 235 +V+ A P++A YPFTTL P+LG+V Y +ADIPGI+ AH+ G+G FL+H E Sbjct: 243 NAVSNAHPRVAPYPFTTLNPHLGVVDFSDYWRMRVADIPGILPGAHENKGLGHNFLRHIE 302 Query: 236 RTHVLLHIVSALEE----NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT--VDSDTL 289 R VLL+I+ E A++ + +EL Y +EL ++ ++ +++D S+ Sbjct: 303 RNAVLLYIIDISESLGSPPAVEAFETLREELRLYKAELAERPFLIAANKVDCEGAQSNLE 362 Query: 290 ARKKNELATQCGQVPFEFSSITGHGI 315 +K+ A + ++ ++ TG G+ Sbjct: 363 RLRKHIGADKAQELIVPMAASTGEGV 388 >gi|163841972|ref|YP_001626377.1| GTPase ObgE [Renibacterium salmoninarum ATCC 33209] gi|261277693|sp|A9WUU2|OBG_RENSM RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|162955448|gb|ABY24963.1| GTP-binding protein OBG family [Renibacterium salmoninarum ATCC 33209] Length = 534 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 125/325 (38%), Positives = 192/325 (59%), Gaps = 19/325 (5%) Query: 24 RREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKG 83 +REKF GGPDGG+GG GG+V ++ + TL+D+ + H A +G +GM R G +G Sbjct: 25 KREKFKPLGGPDGGNGGDGGNVILRVSHQTTTLLDYHHAPHRHASNGGQGMGDWRGGKQG 84 Query: 84 EDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANP 143 E ++L VP GT V +DG ++ DL EG + A GG GG GN+ S +AP +A Sbjct: 85 ETLILPVPDGTVVKTKDG-EVLADLVGEGTEYVAAAGGQGGLGNSSLSSQKRRAPGFALL 143 Query: 144 GILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE 203 G+ G+ I L+LK IADI ++G P+AGKS+ +A+++ A+PKIADYPFTTL PNLG+V+ Sbjct: 144 GVDGEASDIVLELKSIADIALVGFPSAGKSSLIAAMSAARPKIADYPFTTLIPNLGVVEA 203 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQ--AAYQCIL 259 G F +AD+PG+I+ A +G G+G FL+H ER L+H++ + LE + + I Sbjct: 204 GEVRFTIADVPGLIEGASEGKGLGHHFLRHVERCTALVHVLDTATLESDRDPLSDLAIIE 263 Query: 260 DELSAYNSE------------LRKKIEIVGLSQIDTVDSDTLAR-KKNELATQCGQVPFE 306 EL Y + L ++ ++V L++IDT D +A + EL + +V FE Sbjct: 264 AELEKYAVDMSYAGVDGEVIPLNERPKLVALNKIDTPDGKDMAEFVRAELEGRGYRV-FE 322 Query: 307 FSSITGHGIPQILECLHDKIFSIRG 331 S+ + G+ Q+ + + + + R Sbjct: 323 VSASSHEGLRQLSFAMAELVTAARA 347 >gi|62460448|ref|NP_001014874.1| GTP-binding protein 5 [Bos taurus] gi|61554345|gb|AAX46542.1| GTP binding protein 5 [Bos taurus] gi|296481080|gb|DAA23195.1| GTP binding protein 5 [Bos taurus] Length = 454 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 115/283 (40%), Positives = 164/283 (57%), Gaps = 9/283 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTL--IDFR 60 F+D +V +R G GG G F E EFGGPDGG GG GG V ++ + +L + R Sbjct: 72 FVDHRRVLVRGGHGGNGVSCFHSEPRKEFGGPDGGDGGNGGHVVLRVDQQVKSLSSVLSR 131 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ GE G ++N G G + + VPVGT V ++G ++ DL + G I A G Sbjct: 132 YQ----GFDGEDGGRKNCFGRNGAVLYIRVPVGTLV--KEGNEVLADLSRPGDEFIAAVG 185 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F ++ N+AP PG GQE++++L+LK +A G++G PNAGKS+ L +++ Sbjct: 186 GTGGKGNRFFLANDNRAPTTCTPGQPGQERVLFLELKTVAHAGLVGFPNAGKSSLLRAIS 245 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P +A YPFTTL P++GIV E +++ +ADIPGII+ AHQ G+G FL+H ER Sbjct: 246 NARPAVAAYPFTTLNPHVGIVHYEDHQQIAVADIPGIIQGAHQNRGLGLAFLRHIERCPF 305 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 LL +V + EL Y+ L K+ V ++ID Sbjct: 306 LLFLVDLSVPEPWTQLDDLKYELEQYDEGLSKRPYTVVANKID 348 >gi|255280882|ref|ZP_05345437.1| Obg family GTPase CgtA [Bryantella formatexigens DSM 14469] gi|255268330|gb|EET61535.1| Obg family GTPase CgtA [Bryantella formatexigens DSM 14469] Length = 340 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 99/236 (41%), Positives = 150/236 (63%), Gaps = 9/236 (3%) Query: 91 PVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEK 150 P GT + E + +I D+ + R ++ GG GG GN +F + T Q P YA PG +E Sbjct: 1 PEGTVIKEAESGKVIADMSGDNLRQVILKGGKGGLGNMNFATPTMQVPKYAQPGKPAREL 60 Query: 151 IIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFIL 210 + L+LK+IAD+G+IG PN GKST L+ VT A+PKIA+Y FTTL PNLG+V K F++ Sbjct: 61 EVTLELKVIADVGLIGFPNVGKSTLLSRVTNARPKIANYHFTTLSPNLGVVDLEGKGFVI 120 Query: 211 ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL----EENVQAAYQCILDELSAYN 266 ADIPG+I+ A +GAG+G FL+H ERT V++H+V A + V Y+ I EL AYN Sbjct: 121 ADIPGLIEGASEGAGLGHEFLRHIERTRVMIHLVDAASTEGRDPVDDVYK-INHELRAYN 179 Query: 267 SELRKKIEIVGLSQIDTVDS---DTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 +EL + +++ +++D + + D + R ++E Q +V F S+++G G+ ++L Sbjct: 180 AELAGRPQVIAANKVDAIYTEGEDPVKRLRDEFEPQGIKV-FPISAVSGQGLKELL 234 >gi|332206707|ref|XP_003252437.1| PREDICTED: GTP-binding protein 10 isoform 1 [Nomascus leucogenys] Length = 387 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 130/358 (36%), Positives = 193/358 (53%), Gaps = 63/358 (17%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 F+D +++ R GG+GG+ + R G GG+GGDVW+ A + L L D Sbjct: 15 FIDNLRLFTR---GGSGGMGYPRLG---------GEGGKGGDVWVVAQNRMTLKQLKDKY 62 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ F A G G+KG+D + VPVG V +E+G +I +L++E +RI++A G Sbjct: 63 PQKRFVAGVGANSKISALKGSKGKDCEIPVPVGISVTDENG-KIIGELNKENERILVAEG 121 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG K TN P + GQ++II L LKLIAD+G++G PNAGKS+ L+ V+ Sbjct: 122 GLGG------KLLTNFLP------LKGQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVS 169 Query: 181 RAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKP IADY FTTL P LG I+ +K+ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 170 HAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQ 229 Query: 240 LLHIVS----ALEENVQ--AAYQCIL---DELSAYNSELRKKIEIVGLSQIDTVDSDTLA 290 LL +V L + Q A++ I+ EL Y EL+ K ++ ++++D D+ Sbjct: 230 LLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQD-- 287 Query: 291 RKKNELATQCGQVPFEF----------------------SSITGHGIPQILECLHDKI 326 K +EL +Q Q P +F S++TG GI ++ C+ + Sbjct: 288 -KFHELMSQL-QNPKDFLHLFGKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSL 343 >gi|317106668|dbj|BAJ53171.1| JHL18I08.5 [Jatropha curcas] Length = 504 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 118/348 (33%), Positives = 174/348 (50%), Gaps = 56/348 (16%) Query: 2 KFLDEAKVYIRSGDGGAGGI--------------------SFRREKFIEFGG----PDGG 37 K+ D+ + +RSGDGG G I S++ +F G P Sbjct: 71 KYFDQVIITVRSGDGGHGAILSMPNQRSPKSKGSWDKDKTSYKSSYKRDFDGSLILP--- 127 Query: 38 SGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHG--EKGM----KRNRSGAKGEDVVLTVP 91 GG GGD+ + A ++L++F + F A+ G GM + G + + VP Sbjct: 128 MGGHGGDIVVYADEGKDSLLEFHTKSSFNAKRGGNVDGMGVLTSQLHDGFAAPTLRIAVP 187 Query: 92 VGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGIL----- 146 +GT V + G L+ DL Q G I++A GG GG + +L Sbjct: 188 LGTVVKHKRG-KLLADLAQPGDEILVARGGQGGISLLKVPEHRRKRLMTLTTNVLRDDGD 246 Query: 147 --------GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL 198 G+E + L L+++AD+G++GLPNAGKST LA++TRAKP IADYPFTTL PNL Sbjct: 247 KVLILGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLAAITRAKPDIADYPFTTLMPNL 306 Query: 199 GIVKEG--------YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 G + E LAD+PG+++ AH G G+G FL+H RT VL+H+V A E+ Sbjct: 307 GRLDGDPTLGAGMYSSEATLADLPGLVEGAHLGKGLGRNFLRHLRRTRVLVHVVDAAAED 366 Query: 251 VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA 297 Y + +EL YN E ++ IV L++ID ++ D L+ E++ Sbjct: 367 PVNDYITVKEELRMYNPEYLERPYIVVLNKIDLPEARDRLSSLAEEIS 414 >gi|32423700|gb|AAP81243.1| putative GTP-binding protein [Candidatus Portiera aleyrodidarum] Length = 327 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 104/285 (36%), Positives = 165/285 (57%), Gaps = 11/285 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE ++I +G GG G +SF G DGG+GG GG+++ LNTL Sbjct: 1 MQFIDETYIFIEAGTGGTGCLSFSS----LLRGSDGGNGGTGGNIFCIGDKYLNTLFFLN 56 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + +KAQ+GE G + ++G G+DV + VPVG+ + + LI ++ Q I +A G Sbjct: 57 YNKVYKAQNGENGKPKKQNGNNGKDVFIKVPVGSMLRDAQTCELIGEIIIHRQNIKVAKG 116 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN K S N G +G+ + ++++L L+AD+G +G+PN+GKSTF+ S+T Sbjct: 117 GTSGIGNLKTKRSKNMK------GTIGESRNLYIELILLADVGCLGIPNSGKSTFIRSIT 170 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PK+A YPFTTL P LG VK FI+ D+PG+I A QG G+G +F+KH R + Sbjct: 171 SALPKVARYPFTTLRPFLGFVKLNKTYSFIITDVPGLIIGASQGLGLGLKFIKHLNRIKI 230 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 + +++ + V I+ E+ ++ +K + L+++D + Sbjct: 231 ICNLLDVMCNKVLDTTLGIISEIKTIYIDMFQKQRYLVLNKLDKL 275 >gi|168036040|ref|XP_001770516.1| predicted protein [Physcomitrella patens subsp. patens] gi|162678224|gb|EDQ64685.1| predicted protein [Physcomitrella patens subsp. patens] Length = 566 Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 117/326 (35%), Positives = 168/326 (51%), Gaps = 45/326 (13%) Query: 2 KFLDEAKVYIRSGDGGAGG-ISFRREKFIEFG---------------GPDGGS----GGR 41 K+ D+ + +RSGDGG G + F + K + GPDG GG Sbjct: 104 KYFDQVVITVRSGDGGNGATLKFPKPKVDDGDKKFKKEKKIPGTYKRGPDGSLILPLGGH 163 Query: 42 GGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRN------RSGAKGEDVVLTVPVGTQ 95 GGDV + A + +TL+ ++ A+ G R G + + VPVGT Sbjct: 164 GGDVILVADESADTLLPLHRKKRHNAKRGSNVSAMGTLSPSLRDGLDAPVLRIPVPVGTV 223 Query: 96 VFEEDGISLICDLDQEGQRIILAPGGNGGFG------NAHFKSS---TNQAP--YYANPG 144 V + G + DL + G I++A GG GG N + S T Q P G Sbjct: 224 VKRKRGGKFLADLAKPGDEIMVARGGRGGISVVEAANNKRLRDSGLPTIQDPDDKVLTLG 283 Query: 145 ILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-- 202 G+E + L L+++ADIG++GLPNAGKS+ LA+VT AKP+IA YPFTTL PNLG ++ Sbjct: 284 APGEEIALELTLRVVADIGLVGLPNAGKSSLLAAVTVAKPEIAAYPFTTLMPNLGCLEGD 343 Query: 203 -----EGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQ 256 G+ +AD+PG+IK+AH G G+G FL+H RT VL+H+V A + Y Sbjct: 344 PLKNDGGFSSGATMADLPGLIKDAHLGKGLGRMFLRHLRRTRVLVHVVDASSPDPVEDYT 403 Query: 257 CILDELSAYNSELRKKIEIVGLSQID 282 + +EL YN E ++ IV L+++D Sbjct: 404 VLREELHLYNPEYVRRPHIVVLNKLD 429 >gi|114614729|ref|XP_519187.2| PREDICTED: GTP-binding protein 10 isoform 2 [Pan troglodytes] Length = 387 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 130/358 (36%), Positives = 193/358 (53%), Gaps = 63/358 (17%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 F+D+ +++ R GG+GG+ + R G GG+GGDVW+ A + L L D Sbjct: 15 FIDKLRLFTR---GGSGGMGYPRLG---------GEGGKGGDVWVVAQNRMTLKQLKDRY 62 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ F A G G+KG+D + VPVG V +E+G +I +L++E RI++A G Sbjct: 63 PQKRFVAGVGANSKISALKGSKGKDCEIPVPVGISVTDENG-KIIGELNKENDRILVAQG 121 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG K TN P + GQ++II L LKLIAD+G++G PNAGKS+ L+ V+ Sbjct: 122 GLGG------KLLTNFLP------LKGQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVS 169 Query: 181 RAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKP IADY FTTL P LG I+ +K+ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 170 HAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQ 229 Query: 240 LLHIVS----ALEENVQ--AAYQCIL---DELSAYNSELRKKIEIVGLSQIDTVDSDTLA 290 LL +V L + Q A++ I+ EL Y EL+ K ++ ++++D D+ Sbjct: 230 LLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQD-- 287 Query: 291 RKKNELATQCGQVPFEF----------------------SSITGHGIPQILECLHDKI 326 K +EL +Q Q P +F S++TG GI ++ C+ + Sbjct: 288 -KFHELMSQL-QNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSL 343 >gi|297681111|ref|XP_002818310.1| PREDICTED: GTP-binding protein 10-like [Pongo abelii] Length = 387 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 130/358 (36%), Positives = 191/358 (53%), Gaps = 63/358 (17%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 F+D +++ R GG GG+ + R G GG+GGDVW+ A + L L D Sbjct: 15 FIDNLRLFTR---GGCGGMGYPRLG---------GEGGKGGDVWVVAQNRMTLKQLKDKY 62 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ F A G G+KG+D + VPVG V +E+G +I +L++E RI++A G Sbjct: 63 PQKRFVAGVGANSKVSALKGSKGKDCEIPVPVGISVTDENG-KIIGELNKENDRILVAQG 121 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG K TN P + GQ++II L LKLIAD+G++G PNAGKS+ L+ V+ Sbjct: 122 GLGG------KFLTNFLP------LKGQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVS 169 Query: 181 RAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKP IADY FTTL P LG I+ +K+ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 170 HAKPAIADYAFTTLNPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTKQ 229 Query: 240 LLHIVS----ALEENVQ--AAYQCIL---DELSAYNSELRKKIEIVGLSQIDTVDSDTLA 290 LL +V L + Q A++ I+ EL Y EL+ K ++ ++++D D+ Sbjct: 230 LLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQ--- 286 Query: 291 RKKNELATQCGQVPFEF----------------------SSITGHGIPQILECLHDKI 326 K +EL +Q Q P +F S++TG GI ++ C+ + Sbjct: 287 HKFHELMSQL-QNPKDFLHLFGKNMIPERTVAFQHIIPISAVTGEGIEELKNCIRKSL 343 >gi|109067563|ref|XP_001092504.1| PREDICTED: GTP-binding protein 10 [Macaca mulatta] Length = 387 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 124/336 (36%), Positives = 177/336 (52%), Gaps = 62/336 (18%) Query: 36 GGSGGRG-----------GDVWIQATS--NLNTLIDFRYQQHFKAQHGEKGMKRNRSGAK 82 GGSGG G GDVW+ A + L L D Q+ F A G G+K Sbjct: 25 GGSGGMGYPRLGGEGGKGGDVWVVARNRMTLKRLKDKYPQKRFVAGVGANSKVSALKGSK 84 Query: 83 GEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYAN 142 GED + VPVG V +E+G +I +L++E RI++A GG GG K TN P Sbjct: 85 GEDCEIPVPVGISVTDENG-KIIGELNKENDRILVAEGGLGG------KLLTNFLP---- 133 Query: 143 PGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IV 201 + GQ +II L LK+IAD+G++G PNAGKS+ L+ V+ AKP IADY FTTL P LG I+ Sbjct: 134 --LKGQRRIIHLDLKVIADVGLVGFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIM 191 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS----ALEENVQ--AAY 255 +K+ +AD+PG+I+ AH G+G +FLKH ERT LL +V L + Q A+ Sbjct: 192 YRDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAF 251 Query: 256 QCIL---DELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF----- 307 + I+ EL Y EL+ K ++ ++++D D+ + K +EL Q Q P +F Sbjct: 252 ETIILLTKELELYKEELQTKPALLAVNKMDLPDAQS---KFHELMNQL-QNPKDFLHLFG 307 Query: 308 -----------------SSITGHGIPQILECLHDKI 326 S++TG GI ++ C+ + Sbjct: 308 KNMTPERTVEFQHIIPISAVTGEGIEELKNCIRKSL 343 >gi|281182481|ref|NP_001162554.1| GTP-binding protein 10 [Papio anubis] gi|164612454|gb|ABY63619.1| GTP-binding protein 10, isoform 2 (predicted) [Papio anubis] Length = 387 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 124/336 (36%), Positives = 177/336 (52%), Gaps = 62/336 (18%) Query: 36 GGSGGRG-----------GDVWIQATS--NLNTLIDFRYQQHFKAQHGEKGMKRNRSGAK 82 GGSGG G GDVW+ A + L L D Q+ F A G G+K Sbjct: 25 GGSGGMGYPRLGGEGGKGGDVWVVARNRMTLKQLKDKYPQKRFVAGVGANSKVSALKGSK 84 Query: 83 GEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYAN 142 GED + VPVG V +E+G +I +L++E RI++A GG GG K TN P Sbjct: 85 GEDCEIPVPVGISVTDENG-KIIGELNKENDRILVAEGGLGG------KLLTNFLP---- 133 Query: 143 PGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IV 201 + GQ +II L LK+IAD+G++G PNAGKS+ L+ V+ AKP IADY FTTL P LG I+ Sbjct: 134 --LKGQRRIIHLDLKVIADVGLVGFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIM 191 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS----ALEENVQ--AAY 255 +K+ +AD+PG+I+ AH G+G +FLKH ERT LL +V L + Q A+ Sbjct: 192 YRDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAF 251 Query: 256 QCIL---DELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF----- 307 + I+ EL Y EL+ K ++ ++++D D+ + K +EL Q Q P +F Sbjct: 252 ETIILLTKELELYKEELQTKPALLAVNKMDLPDAQS---KFHELMNQL-QNPKDFLHLFG 307 Query: 308 -----------------SSITGHGIPQILECLHDKI 326 S++TG GI ++ C+ + Sbjct: 308 KNMTPERTVGFQHIIPISAVTGEGIEELKNCIRKSL 343 >gi|58332168|ref|NP_001011236.1| GTP binding protein 5 (putative) [Xenopus (Silurana) tropicalis] gi|56556285|gb|AAH87807.1| GTP binding protein 5 [Xenopus (Silurana) tropicalis] gi|89272419|emb|CAJ82811.1| GTP binding protein 5 [Xenopus (Silurana) tropicalis] Length = 405 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 92/233 (39%), Positives = 139/233 (59%), Gaps = 4/233 (1%) Query: 65 FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGG 124 +K +GE G N G GE + + VP+GT V EE L+ DL + G + A GG GG Sbjct: 134 YKGNNGEPGRSANCFGRNGESIYIKVPLGTLVKEEG--MLLADLSKAGDEFLAARGGVGG 191 Query: 125 FGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKP 184 GN F S+ N+AP A PG G+E+++ L+LK +A +G++G PNAGKS+ L ++ A+P Sbjct: 192 KGNRFFLSNENRAPMTATPGQPGEERVLHLELKTMAHVGMVGFPNAGKSSLLRLLSNARP 251 Query: 185 KIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHI 243 +A YPFTTL P++GI+K Y + +AD PGII AHQ G+G FL+H ER +LL + Sbjct: 252 AVAAYPFTTLNPHVGIIKYRDYVQIAVADTPGIIDGAHQNRGLGFAFLRHIERCRILLFV 311 Query: 244 VSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID-TVDSDTLARKKNE 295 + + A + EL YN +L ++ ++ +++D +TL R ++E Sbjct: 312 LDLSHKEPWAQLASLRYELEQYNEDLVQRPHVIVANKLDLPAARETLRRLRHE 364 >gi|119597284|gb|EAW76878.1| hypothetical protein, isoform CRA_a [Homo sapiens] Length = 407 Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 129/358 (36%), Positives = 193/358 (53%), Gaps = 63/358 (17%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 F+D+ +++ R GG+GG+ + R G GG+GGDVW+ A + L L D Sbjct: 35 FIDKLRLFTR---GGSGGMGYPRLG---------GEGGKGGDVWVVAQNRMTLKQLKDRY 82 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ F A G G+KG+D + VPVG V +E+G +I +L++E RI++A G Sbjct: 83 PRKRFVAGVGANSKISALKGSKGKDCEIPVPVGISVTDENG-KIIGELNKENDRILVAQG 141 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG K TN P + GQ++II L LKLIAD+G++G PNAGKS+ L+ V+ Sbjct: 142 GLGG------KLLTNFLP------LKGQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVS 189 Query: 181 RAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKP IADY FTTL P LG I+ +K+ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 190 HAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQ 249 Query: 240 LLHIVS----ALEENVQ--AAYQCIL---DELSAYNSELRKKIEIVGLSQIDTVDSDTLA 290 LL +V L + Q A++ I+ EL Y EL+ K ++ ++++D D+ Sbjct: 250 LLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQD-- 307 Query: 291 RKKNELATQCGQVPFEF----------------------SSITGHGIPQILECLHDKI 326 K +EL +Q Q P +F S++TG GI ++ C+ + Sbjct: 308 -KFHELMSQL-QNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSL 363 >gi|158298582|ref|XP_318758.4| AGAP009702-PA [Anopheles gambiae str. PEST] gi|157013953|gb|EAA14310.4| AGAP009702-PA [Anopheles gambiae str. PEST] Length = 396 Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 123/318 (38%), Positives = 177/318 (55%), Gaps = 7/318 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V G GG G +SF R E GPDGG GG GG V +QAT ++ L Sbjct: 56 FVDCRHVRTIGGKGGDGCVSFLRLWCNENAGPDGGDGGNGGHVVLQATQDVKDLNHI--T 113 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +A GEKG ++ G V+ VP+GT V G ++ DL EG + A GG Sbjct: 114 SLLRADDGEKGATKDCHGKNANHTVVKVPIGTIVRNPQG-KVVGDLSSEGMMFVAARGGA 172 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN FKS QAP A G G+E L+L+ +A IG IGLPNAGKST L +++RA Sbjct: 173 GGKGNHFFKSDLEQAPQVAEFGATGEETAYTLELRSMAHIGFIGLPNAGKSTLLRAISRA 232 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PK+A YPFTTL P+LG+V+ + Y++ +AD+PG+I+ +H+ G+G +FLKH ER + LL Sbjct: 233 RPKVAAYPFTTLKPHLGMVQYDDYEQIAVADLPGLIEGSHKNKGLGIQFLKHAERCNALL 292 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A + Y +L ELS ++ EL + + +++D +++ R LA Sbjct: 293 FVIDASADEPWVHYHTLLHELSMFSEELVTRPRFIIANKVDLPEAE---RNVELLALHVD 349 Query: 302 QVPFEFSSITGHGIPQIL 319 S+ G I ++L Sbjct: 350 VPVIPISAKMGTNIAEML 367 >gi|242037769|ref|XP_002466279.1| hypothetical protein SORBIDRAFT_01g004960 [Sorghum bicolor] gi|241920133|gb|EER93277.1| hypothetical protein SORBIDRAFT_01g004960 [Sorghum bicolor] Length = 505 Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 112/334 (33%), Positives = 168/334 (50%), Gaps = 54/334 (16%) Query: 2 KFLDEAKVYIRSGDGGAGGI----------------SFRR----EKFIEFGGPDGGS--- 38 K+ D A V +R+GDGG G + F R K + + GS Sbjct: 76 KYFDHAVVTVRAGDGGHGAVLAMPPPPSADAAKPRGRFNRGEKKSKKVSYKRNYDGSVAL 135 Query: 39 --GGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKG-------MKRNRSGAKGEDVVLT 89 GG GGDV + A TL+ F + + A+ G R SG GE + + Sbjct: 136 PMGGHGGDVVVYADEAEETLLRFHEKARYCAKRGGNVGAAGGTLSSRMHSGFAGETLRIP 195 Query: 90 VPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGIL--- 146 VPVGT V + G +++ DL G +++A GG GG + +P I+ Sbjct: 196 VPVGTVVKRKKG-AVLADLAHPGDEVLVARGGQGGISLIDVPEYRRRKAMALSPNIMRDT 254 Query: 147 ----------GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP 196 G+E + L L+++AD+G++GLPNAGKST L+++T A+P IADYPFTTL P Sbjct: 255 SDKVLTHGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLSAITLARPDIADYPFTTLMP 314 Query: 197 NLGIVK--------EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 NLG + + E LAD+PG+I+ AH G G+G FL+H RT V++H+V A Sbjct: 315 NLGRLGGDPALGALQFSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRVIVHVVDAAA 374 Query: 249 ENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 ++ Y+ + +EL YN + ++ +V L++ID Sbjct: 375 DDPVNDYKIVREELRMYNPQYLERPYVVVLNKID 408 >gi|242012161|ref|XP_002426805.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212511001|gb|EEB14067.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 875 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 120/320 (37%), Positives = 186/320 (58%), Gaps = 10/320 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD V G GG G ISF + E GPDGG GG GG V +A+S + L + Sbjct: 548 FLDYCSVETFGGKGGDGCISFLQIWANEKAGPDGGDGGHGGHVIFKASSEIKDLS--KIP 605 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KAQ+GE+G ++ G + +TVPVGT + +GI ++ DLD+E I A GG+ Sbjct: 606 KVIKAQNGERGFNKDCFGKNAKHEFVTVPVGTVIRNSNGI-IVGDLDEENAMFIAARGGS 664 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +F SST Q+P A G G+ L++K +A G++G+PNAGKST L +VTRA Sbjct: 665 GGHGNHYFASSTMQSPQVAELGADGENFKYTLEMKTMAHFGLVGVPNAGKSTLLRAVTRA 724 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PK+A Y FTTL P++GIV+ +++ +AD+PG+++ +H+ G+G +FLKH ER LL Sbjct: 725 RPKVAPYAFTTLRPHIGIVQYSDHEQLGIADLPGLVEGSHKNEGLGIQFLKHAERCQGLL 784 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELATQC 300 ++ +N Y+ + E+ +++EL + ++ ++ID ++ D L + ++ Sbjct: 785 FVIDLSIQNPIEQYEMLQYEILKFSNELGHRPRVIIGNKIDLPEARDNLK----DFESKV 840 Query: 301 GQVP-FEFSSITGHGIPQIL 319 P F S+ TG + L Sbjct: 841 KDYPVFAISAKTGLNLSNFL 860 >gi|111955139|ref|NP_149098.2| GTP-binding protein 10 isoform 2 [Homo sapiens] gi|162416050|sp|A4D1E9|GTPBA_HUMAN RecName: Full=GTP-binding protein 10; AltName: Full=Protein obg homolog 2; Short=ObgH2 gi|51094919|gb|EAL24164.1| hypothetical protein BC004923 [Homo sapiens] gi|119597288|gb|EAW76882.1| hypothetical protein, isoform CRA_e [Homo sapiens] Length = 387 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 129/358 (36%), Positives = 193/358 (53%), Gaps = 63/358 (17%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 F+D+ +++ R GG+GG+ + R G GG+GGDVW+ A + L L D Sbjct: 15 FIDKLRLFTR---GGSGGMGYPRLG---------GEGGKGGDVWVVAQNRMTLKQLKDRY 62 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ F A G G+KG+D + VPVG V +E+G +I +L++E RI++A G Sbjct: 63 PRKRFVAGVGANSKISALKGSKGKDCEIPVPVGISVTDENG-KIIGELNKENDRILVAQG 121 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG K TN P + GQ++II L LKLIAD+G++G PNAGKS+ L+ V+ Sbjct: 122 GLGG------KLLTNFLP------LKGQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVS 169 Query: 181 RAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKP IADY FTTL P LG I+ +K+ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 170 HAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQ 229 Query: 240 LLHIVS----ALEENVQ--AAYQCIL---DELSAYNSELRKKIEIVGLSQIDTVDSDTLA 290 LL +V L + Q A++ I+ EL Y EL+ K ++ ++++D D+ Sbjct: 230 LLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQD-- 287 Query: 291 RKKNELATQCGQVPFEF----------------------SSITGHGIPQILECLHDKI 326 K +EL +Q Q P +F S++TG GI ++ C+ + Sbjct: 288 -KFHELMSQL-QNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSL 343 >gi|328769698|gb|EGF79741.1| hypothetical protein BATDEDRAFT_12037 [Batrachochytrium dendrobatidis JAM81] Length = 355 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 106/281 (37%), Positives = 164/281 (58%), Gaps = 10/281 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D + + +G+GG G I+F + G P GG+GGRGG+++I A+ N+ +L + Sbjct: 1 FVDFKYIKVCAGNGGDGTIAFLKGLNGPIGPPAGGNGGRGGNIYITASKNITSLNNV--L 58 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + A+ G GM + G GED+ + VPVGT V E +L ++G+R ++ GG Sbjct: 59 NRYMARSGSAGMGKQMHGHDGEDLDIVVPVGTLVKE-------FELLEDGERKLVVRGGA 111 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN HF + T P A G+ + ++ L+LK +AD G++GLPNAGKST L + + A Sbjct: 112 GGLGNTHFVTPTIPGPGIAGRGVRVEPIVLQLELKTMADAGLVGLPNAGKSTLLKATSNA 171 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 PKIA YPFTTL P +G + E + +ADIPGIIK AH G+G RFL+H ERT +L+ Sbjct: 172 HPKIAPYPFTTLNPYVGTIDFEDFWTMTIADIPGIIKGAHDNLGLGHRFLRHIERTKLLV 231 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 +++ E + +EL A+ ++ + ++ ++ D Sbjct: 232 YVIDLAGEAPWDDLATLQNELEAFQKDMTDRPSLIAANKAD 272 >gi|301769859|ref|XP_002920357.1| PREDICTED: GTP-binding protein 5-like [Ailuropoda melanoleuca] Length = 389 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 115/283 (40%), Positives = 168/283 (59%), Gaps = 9/283 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTL--IDFR 60 F+D +V + G GG G F E EFGGPDGG GG GG V ++A + +L + R Sbjct: 62 FVDHRRVLVCGGRGGDGVSCFHSEPRKEFGGPDGGDGGNGGHVVLRADQQVKSLSSVLSR 121 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ HGE G ++N SG G + + VPVGT V ++G ++ DL G I A G Sbjct: 122 YQ----GAHGEAGGRKNCSGRSGAVLYVRVPVGTLV--KEGKEVVADLSCPGDEYIAALG 175 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F ++ N+AP PG GQ++I++L+LK +A G++G PNAGKS+ L +++ Sbjct: 176 GAGGKGNRFFLANDNRAPVTCTPGEPGQQRILFLELKTVAHAGMVGFPNAGKSSLLRAIS 235 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P +A YPFTTL P++GIV E +++ +ADIPGI++ AHQ G+G FL+H ER Sbjct: 236 NARPAVASYPFTTLKPHVGIVHCEDHQQIAVADIPGIVRGAHQNRGLGSTFLRHIERCRF 295 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 LL +V E + + EL Y + L ++ ++ ++ID Sbjct: 296 LLFVVDLSEPEPWTQVEDLKSELEKYEAGLSERPHVIVANKID 338 >gi|291416056|ref|XP_002724262.1| PREDICTED: GTP binding protein 5 (putative)-like [Oryctolagus cuniculus] Length = 423 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 116/311 (37%), Positives = 177/311 (56%), Gaps = 8/311 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +V +R G+GG+G F E EFGGPDGG GG GG V ++ + +L Q Sbjct: 72 FVDHRRVLVRGGNGGSGASCFHSEPRKEFGGPDGGDGGSGGHVILRVDQQVKSLSSVLSQ 131 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++ HGE G +N SG G + + VPVGT V ++G ++ DL + G + A GG Sbjct: 132 --YQGFHGEDGGSKNCSGRGGAVLYVRVPVGTLV--KEGGQVVADLCRPGDEYVAALGGA 187 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++ N+AP PG GQE+++ L+L+ IA G++G PNAGKS+ L +++ A Sbjct: 188 GGKGNRFFLANDNRAPVTCTPGQPGQERVLHLELQTIAHAGLVGFPNAGKSSLLCAISNA 247 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P +A YPFTTL P++GIV EG+ + +ADIPGI++ AH+ G+G FL+H ER LL Sbjct: 248 RPAVASYPFTTLNPHVGIVHYEGHLQIAVADIPGIVRGAHRNRGLGLAFLRHIERCRCLL 307 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V + + EL Y L ++ + +++D ++ + +L G Sbjct: 308 FLVDLSLPEPWTQVEDLQHELDRYKEGLSQRPHAIVANKVDLPEAKA---RLPQLRAHLG 364 Query: 302 QVPFEFSSITG 312 Q S++TG Sbjct: 365 QEVIALSAVTG 375 >gi|32491224|ref|NP_871478.1| GTPase ObgE [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|81741626|sp|Q8D279|OBG_WIGBR RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|25166431|dbj|BAC24621.1| yhbZ [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 337 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 101/256 (39%), Positives = 155/256 (60%), Gaps = 3/256 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M D A ++++ G+GG G +SFRREK+I GGPDGG+GG GG+VWI + N + L Sbjct: 1 MNLTDNAVIFVKGGNGGKGCVSFRREKYIPKGGPDGGNGGNGGNVWIYSDKNTHDLYHCL 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE-EDGISLICDLDQ-EGQRIILA 118 +++F A+ GE G K N SG G+DV++ VP+GT +F ++ ++I + Q+ ++A Sbjct: 61 VRKNFIAEDGENGKKNNSSGKNGKDVIIKVPIGTNIFFIKNSENIIFGHTRFHNQKFLVA 120 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG G GN +FKS TN+ P + G LG+ I L +AD+G+ G N G+S F+ S Sbjct: 121 KGGVRGLGNNYFKSPTNRTPMESTLGKLGESFKIKLDFVFLADVGLFGYSNTGRSCFMRS 180 Query: 179 VTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 ++ KPKI+ YPFTTL+P +G + K+ DIP I+ + + +RFLKH + Sbjct: 181 ISNVKPKISFYPFTTLFPYIGSLNFLNKDIKFVDIPSFIE-GKKKNNLRNRFLKHLQNCR 239 Query: 239 VLLHIVSALEENVQAA 254 +LLH ++ +NV+ Sbjct: 240 LLLHFINLDVKNVKKT 255 >gi|307173627|gb|EFN64478.1| GTP-binding protein 10-like protein [Camponotus floridanus] Length = 389 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 106/303 (34%), Positives = 170/303 (56%), Gaps = 37/303 (12%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNT--LIDF 59 +F+D ++ +R G GGAG + GG GG+V++ LN +I Sbjct: 22 RFIDSLRLLVRGGTGGAGLPRYGG------------IGGAGGNVYVVTKDKLNLQDVIKK 69 Query: 60 RYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAP 119 + KA G + GA GED +++VP G ++ ++G+ ++ +L++E ++++A Sbjct: 70 LKTKRIKADAGGDSSAKGIIGAPGEDKIISVPCGITIYNQNGV-ILGELNKEKMKLLVAK 128 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GGNGG + G+ G+ + I L +KLIAD+G++G PNAGKSTFLA+V Sbjct: 129 GGNGGCEETGY------------CGLKGESQTIKLDMKLIADVGLVGFPNAGKSTFLAAV 176 Query: 180 TRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 +R KPKIADYPFTT+ P LGI+K E ++ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 177 SRTKPKIADYPFTTIRPRLGIMKYEDERQITVADLPGLIEGAHMNVGMGHKFLKHIERTK 236 Query: 239 VLLHIVSALEENVQAAY---QCIL------DELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 +LL I+ + Y C+ E+ Y +L K IV ++++DT ++D + Sbjct: 237 LLLFIIDIQGFQLSPKYTRRSCLETLVLLNKEIELYKPDLLKMPTIVIINKMDTDNADNI 296 Query: 290 ARK 292 ++ Sbjct: 297 LKE 299 >gi|36338340|gb|AAH04923.3| GTPBP10 protein [Homo sapiens] gi|48257234|gb|AAH21573.2| GTPBP10 protein [Homo sapiens] Length = 378 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 129/358 (36%), Positives = 192/358 (53%), Gaps = 63/358 (17%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 F+D+ +++ R GG+GG+ + R G GG+GGDVW+ A + L L D Sbjct: 6 FIDKLRLFTR---GGSGGMGYPRLG---------GEGGKGGDVWVVAQNRMTLKQLKDRY 53 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ F A G G+KG+D + VPVG V +E+G +I +L +E RI++A G Sbjct: 54 PRKRFVAGVGANSKISALKGSKGKDWEIPVPVGISVTDENG-KIIGELSKENDRILVAQG 112 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG K TN P + GQ++II L LKLIAD+G++G PNAGKS+ L+ V+ Sbjct: 113 GLGG------KLLTNFLP------LKGQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVS 160 Query: 181 RAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKP IADY FTTL P LG I+ +K+ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 161 HAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQ 220 Query: 240 LLHIVS----ALEENVQ--AAYQCIL---DELSAYNSELRKKIEIVGLSQIDTVDSDTLA 290 LL +V L + Q A++ I+ EL Y EL+ K ++ ++++D D+ Sbjct: 221 LLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQD-- 278 Query: 291 RKKNELATQCGQVPFEF----------------------SSITGHGIPQILECLHDKI 326 K +EL +Q Q P +F S++TG GI ++ C+ + Sbjct: 279 -KFHELMSQL-QNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSL 334 >gi|21754841|dbj|BAC04573.1| unnamed protein product [Homo sapiens] Length = 387 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 129/358 (36%), Positives = 193/358 (53%), Gaps = 63/358 (17%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 F+D+ +++ R GG+GG+ + R G GG+GGDVW+ A + L L D Sbjct: 15 FIDKLRLFTR---GGSGGMGYPRLG---------GEGGKGGDVWVVAQNRMTLKQLKDRY 62 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ F A G G+KG+D + VPVG V +E+G +I +L++E RI++A G Sbjct: 63 PRKRFVAGVGANSKISALKGSKGKDWEIPVPVGISVTDENG-KIIGELNKENDRILVAQG 121 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG K TN P + GQ++II L LKLIAD+G++G PNAGKS+ L+ V+ Sbjct: 122 GLGG------KLLTNFLP------LKGQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVS 169 Query: 181 RAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKP IADY FTTL P LG I+ +K+ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 170 HAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQ 229 Query: 240 LLHIVS----ALEENVQ--AAYQCIL---DELSAYNSELRKKIEIVGLSQIDTVDSDTLA 290 LL +V L + Q A++ I+ EL Y EL+ K ++ ++++D D+ Sbjct: 230 LLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQD-- 287 Query: 291 RKKNELATQCGQVPFEF----------------------SSITGHGIPQILECLHDKI 326 K +EL +Q Q P +F S++TG GI ++ C+ + Sbjct: 288 -KFHELMSQL-QNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSL 343 >gi|224078456|ref|XP_002195000.1| PREDICTED: similar to GTP binding protein 5 (putative) [Taeniopygia guttata] Length = 408 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 127/286 (44%), Positives = 175/286 (61%), Gaps = 7/286 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLID-FRY 61 F+D+ KV + G GG GG SF E FGGPDGG+GG GG V +A + +L FR+ Sbjct: 74 FVDQRKVRVVGGQGGDGGHSFHSEPRKVFGGPDGGNGGDGGHVIFKADQQMKSLSSVFRF 133 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + F HGE+G +N GA G + + VPVGT V +EDG ++ DL Q G+ I A GG Sbjct: 134 YRGF---HGERGGSKNCYGANGAHLYVKVPVGTLV-KEDG-EVVADLTQHGEEYIAAYGG 188 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN F S+ N+AP PG GQE+++ L+LK A G++G PNAGKS+ L +++R Sbjct: 189 AGGKGNRFFLSNENRAPKLFTPGEPGQERVLQLELKTTAHAGLVGFPNAGKSSLLRAISR 248 Query: 182 AKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKP +A YPFTTL P++GIV + Y++ +ADIPG+IK AHQ G+G FLKH ER L Sbjct: 249 AKPAVAAYPFTTLNPHVGIVHYQDYEQVAVADIPGLIKGAHQNRGLGMAFLKHIERCRFL 308 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 L++V Q + EL AY L ++ +V +++D +S Sbjct: 309 LYVVDLSVPQPWIQLQDLKYELEAYEKGLSERPCVVVGNKVDLAES 354 >gi|194689984|gb|ACF79076.1| unknown [Zea mays] Length = 466 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 111/334 (33%), Positives = 167/334 (50%), Gaps = 54/334 (16%) Query: 2 KFLDEAKVYIRSGDGGAGGI----------------SFRR----EKFIEFGGPDGGS--- 38 K+ D A V +R+GDGG G + F R K + + GS Sbjct: 37 KYFDHAVVTVRAGDGGHGAVLAMPPAPSADAAKPRGRFNRGEKKSKKVSYKRNYDGSVAL 96 Query: 39 --GGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKG-------MKRNRSGAKGEDVVLT 89 GG GGDV + A TL+ F + + A+ G R SG GE + + Sbjct: 97 PTGGHGGDVVVYADEAEETLLRFHEKARYCAKRGGNVGAAGGTLSSRMHSGFAGETLRIP 156 Query: 90 VPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGIL--- 146 VPVGT V + G +++ DL +++A GG GG + +P I+ Sbjct: 157 VPVGTVVKRKKG-AVLADLAHHCDEVLVARGGQGGISLIDVPEYKRRKAMALSPNIMRDT 215 Query: 147 ----------GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP 196 G+E + L L+++AD+G++GLPNAGKST L+++T A+P IADYPFTTL P Sbjct: 216 SDKVLTHGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLSAITLARPDIADYPFTTLMP 275 Query: 197 NLGIVK--------EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 NLG + + E LAD+PG+I+ AH G G+G FL+H RT V++H+V A Sbjct: 276 NLGRLGGDPALGALQFSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRVIVHVVDAAA 335 Query: 249 ENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 ++ Y+ + +EL YN + ++ +V L++ID Sbjct: 336 DDPVNDYKIVREELRMYNPQYLERPYVVVLNKID 369 >gi|291234621|ref|XP_002737247.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii] Length = 378 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 110/312 (35%), Positives = 162/312 (51%), Gaps = 39/312 (12%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D ++Y++ GGAGG+ G P G G G + TS+ TL + Sbjct: 27 FQDTLRIYVK---GGAGGM----------GLPSLGGQGGDGGDVVLVTSSKMTLRKLQMT 73 Query: 63 Q---HFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAP 119 + F A +G +R +G +G D +++VP G V +DG +I DLDQ G+++++A Sbjct: 74 EPTKRFTASNGVNSRERRLAGIRGVDRIVSVPSGVTVVSDDG-QVIADLDQPGKQVVVAK 132 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG + G G+ K + L LKLIADIG++G PNAGKST L + Sbjct: 133 GGKGGCAATEWN------------GQKGERKSVKLDLKLIADIGLVGFPNAGKSTLLGGL 180 Query: 180 TRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 +R KPKIADYPFTT+ P +GI+ + ++ +AD+PG+++ AH G+G FLKH ERT Sbjct: 181 SRTKPKIADYPFTTVKPQIGIIHYDDNRQISMADLPGLVEGAHLNIGMGHMFLKHVERTK 240 Query: 239 VLLHIVSA---------LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 +LL I+ L + EL Y EL K I+ ++++DT +S Sbjct: 241 LLLFIIDVHGFQLSPKYLHRTAFETLSLLNRELELYKPELISKPAILAINKLDTEESQEK 300 Query: 290 ARKKNELATQCG 301 + E QCG Sbjct: 301 LQPLLEKLQQCG 312 >gi|212275246|ref|NP_001130736.1| hypothetical protein LOC100191840 [Zea mays] gi|195613726|gb|ACG28693.1| small GTP-binding protein domain [Zea mays] Length = 507 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 111/334 (33%), Positives = 167/334 (50%), Gaps = 54/334 (16%) Query: 2 KFLDEAKVYIRSGDGGAGGI----------------SFRR----EKFIEFGGPDGGS--- 38 K+ D A V +R+GDGG G + F R K + + GS Sbjct: 78 KYFDHAVVTVRAGDGGHGAVLAMPPAPSADAAKPRGRFNRGEKKSKKVSYKRNYDGSVAL 137 Query: 39 --GGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKG-------MKRNRSGAKGEDVVLT 89 GG GGDV + A TL+ F + + A+ G R SG GE + + Sbjct: 138 PTGGHGGDVVVYADEAEETLLRFHEKARYCAKRGGNVGAAGGTLSSRMHSGFAGETLRIP 197 Query: 90 VPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGIL--- 146 VPVGT V + G +++ DL +++A GG GG + +P I+ Sbjct: 198 VPVGTVVKRKKG-AVLADLAHHCDEVLVARGGQGGISLIDVPEYKRRKAMALSPNIMRDT 256 Query: 147 ----------GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP 196 G+E + L L+++AD+G++GLPNAGKST L+++T A+P IADYPFTTL P Sbjct: 257 SDKVLTHGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLSAITLARPDIADYPFTTLMP 316 Query: 197 NLGIVK--------EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 NLG + + E LAD+PG+I+ AH G G+G FL+H RT V++H+V A Sbjct: 317 NLGRLGGDPALGALQFSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRVIVHVVDAAA 376 Query: 249 ENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 ++ Y+ + +EL YN + ++ +V L++ID Sbjct: 377 DDPVNDYKIVREELRMYNPQYLERPYVVVLNKID 410 >gi|115455957|ref|NP_001051579.1| Os03g0799700 [Oryza sativa Japonica Group] gi|28209500|gb|AAO37518.1| putative GTP-binding protein [Oryza sativa Japonica Group] gi|108711581|gb|ABF99376.1| GTP1/OBG family protein, expressed [Oryza sativa Japonica Group] gi|113550050|dbj|BAF13493.1| Os03g0799700 [Oryza sativa Japonica Group] Length = 504 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 121/363 (33%), Positives = 183/363 (50%), Gaps = 65/363 (17%) Query: 2 KFLDEAKVYIRSGDGGAGGI-------------SFRRE---------KFIEFGGPDGGS- 38 K+ D A V +R+GDGG G + S RR K + + GS Sbjct: 74 KYFDHAVVTVRAGDGGHGAVLAMPASPSTDAPKSPRRRSDKGKRSGVKKVSYKRNYDGSV 133 Query: 39 ----GGRGGDVWIQATSNLNTLIDFRYQQHFKAQHG----EKGM--KRNRSGAKGEDVVL 88 GG GGDV + A TL+ F + + A+ G G R +G GE + + Sbjct: 134 ALPMGGHGGDVVVYADEAEETLLRFHEKARYCAKRGGNVGATGTLSSRMHNGFAGETLRI 193 Query: 89 TVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGIL-- 146 VPVGT V + G +++ DL G +I+A GG GG + +P I+ Sbjct: 194 PVPVGTVVKRKKG-AVLADLAHPGDEVIVARGGQGGISLIDVPEYRRRKAMVLSPNIMRD 252 Query: 147 -----------GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLY 195 G+E + L L+++AD+G++GLPNAGKST L+++T A+P IADYPFTTL Sbjct: 253 VSDRVLIHGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLSAITLARPDIADYPFTTLM 312 Query: 196 PNLGIVK--------EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 PNLG + + E LAD+PG+I+ AH G G+G FL+H RT V++H+V A Sbjct: 313 PNLGRLGGDPALGALQFSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRVIVHVVDAA 372 Query: 248 EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF 307 ++ Y+ + +EL YN + ++ +V L++ID L + ++ L++ + FE Sbjct: 373 ADDPVDDYKIVREELRMYNPQYLERPYVVVLNKID------LPKAQDRLSS----LAFEI 422 Query: 308 SSI 310 SSI Sbjct: 423 SSI 425 >gi|218193917|gb|EEC76344.1| hypothetical protein OsI_13922 [Oryza sativa Indica Group] Length = 504 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 121/363 (33%), Positives = 183/363 (50%), Gaps = 65/363 (17%) Query: 2 KFLDEAKVYIRSGDGGAGGI-------------SFRRE---------KFIEFGGPDGGS- 38 K+ D A V +R+GDGG G + S RR K + + GS Sbjct: 74 KYFDHAVVTVRAGDGGHGAVLAMPASPSTDAPKSPRRRSDKGKRSGVKKVSYKRNYDGSV 133 Query: 39 ----GGRGGDVWIQATSNLNTLIDFRYQQHFKAQHG----EKGM--KRNRSGAKGEDVVL 88 GG GGDV + A TL+ F + + A+ G G R +G GE + + Sbjct: 134 ALPMGGHGGDVVVYADEAEETLLRFHEKARYCAKRGGNVGATGTLSSRMHNGFAGETLRI 193 Query: 89 TVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGIL-- 146 VPVGT V + G +++ DL G +I+A GG GG + +P I+ Sbjct: 194 PVPVGTVVKRKKG-AILADLAHPGDEVIVARGGQGGISLIDVPEYRRRKAMALSPNIMRD 252 Query: 147 -----------GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLY 195 G+E + L L+++AD+G++GLPNAGKST L+++T A+P IADYPFTTL Sbjct: 253 VSDRVLIHGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLSAITLARPDIADYPFTTLM 312 Query: 196 PNLGIVK--------EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 PNLG + + E LAD+PG+I+ AH G G+G FL+H RT V++H+V A Sbjct: 313 PNLGRLGGDPALGALQFSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRVIVHVVDAA 372 Query: 248 EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF 307 ++ Y+ + +EL YN + ++ +V L++ID L + ++ L++ + FE Sbjct: 373 ADDPVDDYKIVREELRMYNPQYLERPYVVVLNKID------LPKAQDRLSS----LAFEI 422 Query: 308 SSI 310 SSI Sbjct: 423 SSI 425 >gi|195977104|gb|ACG63654.1| GTP-binding protein 10 (predicted) [Otolemur garnettii] Length = 356 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 110/274 (40%), Positives = 157/274 (57%), Gaps = 36/274 (13%) Query: 36 GGSGGRG-----------GDVWIQA--TSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAK 82 GGSGG G GDVW+ A L L + Q+ F A+ G G+K Sbjct: 25 GGSGGMGYPRLGGEGGRGGDVWVVAHKKMTLRQLKNKYPQKRFVAEGGANSKVSALKGSK 84 Query: 83 GEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYAN 142 G+D + VP+G V +E+G +I +L++EG RI++A GG GG K TN P Sbjct: 85 GKDYEIPVPLGISVTDENG-KIIGELNKEGDRILVAEGGLGG------KLLTNFLP---- 133 Query: 143 PGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IV 201 + GQ++II L LKLIAD+G++G PNAGKS+ L+ V+ AKP IADY FTTL P LG I+ Sbjct: 134 --LKGQKRIIHLDLKLIADVGLVGFPNAGKSSLLSRVSHAKPAIADYAFTTLKPELGKIM 191 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS------ALEENVQAAY 255 +K+ +AD+PG+I+ AH G+G RFLKH ERT LL +V + + + A+ Sbjct: 192 YNDFKQISVADLPGLIEGAHMNKGMGHRFLKHIERTRQLLFVVDICGFQLSSKTQYRTAF 251 Query: 256 QCIL---DELSAYNSELRKKIEIVGLSQIDTVDS 286 + IL EL Y EL+ K ++ ++++D D+ Sbjct: 252 ETILLLTKELELYKEELQTKPALLVVNKMDLPDA 285 >gi|281350067|gb|EFB25651.1| hypothetical protein PANDA_008992 [Ailuropoda melanoleuca] Length = 374 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 115/292 (39%), Positives = 167/292 (57%), Gaps = 37/292 (12%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 F+D +++ R GG+GG+ + R G GG+GGDVW+ A + L L D Sbjct: 8 FIDNLRLFTR---GGSGGMGYPRLG---------GEGGKGGDVWVVAHNKMTLKQLKDKY 55 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ F A G G+KG+D + VPVG V +E+G +I +L++E RI++A G Sbjct: 56 PQKRFVAGEGANSRVSALKGSKGKDCEIPVPVGISVTDENG-KIIGELNKEKDRILVAEG 114 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG K TN P + GQ++II L LKLIADIG++G PNAGKS+ L+ V+ Sbjct: 115 GLGG------KLLTNFLP------LKGQKRIIHLDLKLIADIGLVGFPNAGKSSLLSQVS 162 Query: 181 RAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKP IADY FTTL P LG I+ +++ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 163 HAKPAIADYAFTTLKPQLGKIMYNDFRQISVADLPGLIEGAHMNKGMGHKFLKHVERTRQ 222 Query: 240 LLHIV--SALEENVQAAYQCILD-------ELSAYNSELRKKIEIVGLSQID 282 LL +V S + + Q Y+ + EL Y EL+ K ++ ++++D Sbjct: 223 LLFVVDISGFQLSSQTQYRTAFETVILLTKELELYKEELQTKPALLAVNKMD 274 >gi|109091389|ref|XP_001089829.1| PREDICTED: GTP-binding protein 5 [Macaca mulatta] Length = 406 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 121/326 (37%), Positives = 183/326 (56%), Gaps = 10/326 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +V + G+GGAG F E EFGGPDGG GG GG V ++ + +L Q Sbjct: 72 FVDCRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSQ 131 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++ GE G +N G G + + VPVGT V ++G ++ DL + G I A GG Sbjct: 132 --YQGFSGEDGGSKNCFGRSGAVLYVQVPVGTLV--KEGGRVVADLSRMGDEYIAALGGA 187 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++ N+AP PG GQ++++ L+LK +A G++G PNAGKS+ L +++ A Sbjct: 188 GGKGNRFFLANDNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNA 247 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P +A YPFTTL P++GIV EG+++ +ADIPGII+ AHQ G+G FL+H ER LL Sbjct: 248 RPAVASYPFTTLKPHVGIVHYEGHQQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLL 307 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V + + EL Y L ++ + ++ID ++ ++L G Sbjct: 308 FVVDLSQPEPWTQVDDLKYELEMYEEGLSERPHAIIANKIDLPEARA---NLSQLRDHLG 364 Query: 302 QVPFEFSSITGHGIPQILECLHDKIF 327 + S++TG + Q+L LH K+ Sbjct: 365 REVIALSALTGENLEQLL--LHLKVL 388 >gi|197100334|ref|NP_001124977.1| GTP-binding protein 5 [Pongo abelii] gi|75070910|sp|Q5RDW1|GTPB5_PONAB RecName: Full=GTP-binding protein 5 gi|55726558|emb|CAH90046.1| hypothetical protein [Pongo abelii] Length = 406 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 124/328 (37%), Positives = 184/328 (56%), Gaps = 14/328 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTL--IDFR 60 F+D +V + G+GGAG F E EFGGPDGG GG GG V ++A + +L + R Sbjct: 72 FVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRADQQVKSLSSVLSR 131 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ GE G +N G G + + VP+GT V ++G ++ DL + G I A G Sbjct: 132 YQ----GFSGEDGGSKNCFGRSGAVLYIRVPMGTLV--KEGGRVVADLSRVGDEYIAALG 185 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F ++ N+AP PG GQ++++ L+LK +A G++G PNAGKS+ L +++ Sbjct: 186 GAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAIS 245 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P +A YPFTTL P++GIV EG+ + +ADIPGII+ AHQ G+G FL+H ER Sbjct: 246 NARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRF 305 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LL +V + + EL Y L ++ + ++ID ++ ++L Sbjct: 306 LLFVVDLSQPEPWTQVDDLKYELEMYEKGLSERPHAIIANKIDLPEAQA---NLSQLRDH 362 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIF 327 GQ S++TG + Q+L LH K+ Sbjct: 363 LGQEVIVLSALTGENLEQLL--LHLKVL 388 >gi|332020820|gb|EGI61218.1| GTP-binding protein 5 [Acromyrmex echinatior] Length = 604 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 118/288 (40%), Positives = 173/288 (60%), Gaps = 6/288 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY- 61 F+D V G+GG G ISF R + GPDGG GG GG V + TSN+ D R+ Sbjct: 270 FVDIRSVKTIGGNGGDGQISFLRLWINDRAGPDGGDGGHGGHVIFETTSNVK---DLRHI 326 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 +A+ GEKG ++ G E V+ VP+GT V + +G ++ DL +EG I A GG Sbjct: 327 DSVIRAKDGEKGYSKDCFGKNAEHNVVKVPIGTIVRDVEG-KILADLSKEGMMFIAARGG 385 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA FKS T Q P G +G+ L+++ +A IG+IGLPNAGKST L +++R Sbjct: 386 AGGHGNAFFKSDTQQTPEICEYGAIGENLQYVLEIRSMAHIGLIGLPNAGKSTLLRAISR 445 Query: 182 AKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIA YPFTTL P++GI++ + Y++ +AD+PG+I+++H+ G+G FLKH ER VL Sbjct: 446 ARPKIAAYPFTTLKPHIGIIQYDDYEQVAVADMPGLIEDSHKNRGLGITFLKHVERCAVL 505 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT 288 + I+ + Q + E+S +N L + I+ ++ID D++ Sbjct: 506 VFILDVTQNEPWEVLQTLKYEISQFNERLNDRPHIIVANKIDLPDAEV 553 >gi|149705919|ref|XP_001490276.1| PREDICTED: GTP-binding protein 10 (putative) [Equus caballus] Length = 386 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 125/354 (35%), Positives = 189/354 (53%), Gaps = 55/354 (15%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 F+D +++ R GG+GG+ + R G GG+GGDVW+ A + L L D Sbjct: 15 FIDNLRLFTR---GGSGGMGYPRLG---------GEGGKGGDVWVVAHNKMTLKQLKDKY 62 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ F A G G+KG+D + VPVG V +E+G +I +L++E R+++A G Sbjct: 63 PQKRFVAGEGANSRVSALKGSKGKDCEIPVPVGISVTDENG-KIIGELNKEKDRLLVAEG 121 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG K TN P + GQ+++I L LKL+ADIG++G PNAGKS+ L+ ++ Sbjct: 122 GLGG------KLLTNFLP------LKGQKRVIHLDLKLMADIGLVGFPNAGKSSLLSQIS 169 Query: 181 RAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKP IADY FTTL P LG I+ +K+ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 170 HAKPAIADYAFTTLKPELGKIMYNDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQ 229 Query: 240 LLHIV--SALEENVQAAYQCILD-------ELSAYNSELRKKIEIVGLSQIDTVDS-DTL 289 LL +V S + + Q Y+ + EL Y EL+ K ++ ++++D D+ D Sbjct: 230 LLFVVDISGFQLSSQTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQDKF 289 Query: 290 ARKKNELAT--------QCGQVP---FEF------SSITGHGIPQILECLHDKI 326 N+L + +P EF S+IT GI ++ C+ + Sbjct: 290 CVLMNQLQNPKDFLHLFEKNMIPERTIEFQHIIPISAITREGIDELKNCIRKSL 343 >gi|321457472|gb|EFX68558.1| hypothetical protein DAPPUDRAFT_203237 [Daphnia pulex] Length = 605 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 124/321 (38%), Positives = 182/321 (56%), Gaps = 12/321 (3%) Query: 4 LDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQ 63 +D + +R G GG G IS RR GGPDGG GG GG V +AT+N +L + Sbjct: 271 IDFRSIKVRGGKGGDGCISLRRLCKNPLGGPDGGDGGSGGHVTFKATNNKTSL------E 324 Query: 64 HF----KAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAP 119 H KA GEKG+ R+ G E +VL VPVGT +F+ ++ DL+++G I A Sbjct: 325 HIPSIIKADDGEKGINRDCHGRNAEHLVLEVPVGT-MFKSSNGQILADLNEDGAVFIAAR 383 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG GN +F + NQAP A G G+E ++++ IA +G+IGLPNAGKSTFL S+ Sbjct: 384 GGAGGKGNHYFATDVNQAPEIAEYGADGEELSYTVEIRTIAHVGLIGLPNAGKSTFLRSI 443 Query: 180 TRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 +RA+PK+A YPFTTL P++G+VK + ++ +ADIPG+I AH+ G+G FL+H ER Sbjct: 444 SRARPKVAPYPFTTLQPHVGVVKYDDLQQVTVADIPGLIAGAHRNRGLGIAFLRHIERCL 503 Query: 239 VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 LL++V + + EL Y+ L ++ V +++D S ++ + Sbjct: 504 CLLYVVDTSLPEPWQQLEVLRYELEQYDPHLLERPSGVLANKMDLPQSTINLKELKQYVE 563 Query: 299 QCGQVPFEFSSITGHGIPQIL 319 + F S++ G+ IL Sbjct: 564 KINLPLFPVSAMNNVGVLPIL 584 >gi|301769715|ref|XP_002920276.1| PREDICTED: GTP-binding protein 10-like [Ailuropoda melanoleuca] Length = 383 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 115/292 (39%), Positives = 167/292 (57%), Gaps = 37/292 (12%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 F+D +++ R GG+GG+ + R G GG+GGDVW+ A + L L D Sbjct: 15 FIDNLRLFTR---GGSGGMGYPRLG---------GEGGKGGDVWVVAHNKMTLKQLKDKY 62 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ F A G G+KG+D + VPVG V +E+G +I +L++E RI++A G Sbjct: 63 PQKRFVAGEGANSRVSALKGSKGKDCEIPVPVGISVTDENG-KIIGELNKEKDRILVAEG 121 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG K TN P + GQ++II L LKLIADIG++G PNAGKS+ L+ V+ Sbjct: 122 GLGG------KLLTNFLP------LKGQKRIIHLDLKLIADIGLVGFPNAGKSSLLSQVS 169 Query: 181 RAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKP IADY FTTL P LG I+ +++ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 170 HAKPAIADYAFTTLKPQLGKIMYNDFRQISVADLPGLIEGAHMNKGMGHKFLKHVERTRQ 229 Query: 240 LLHIV--SALEENVQAAYQCILD-------ELSAYNSELRKKIEIVGLSQID 282 LL +V S + + Q Y+ + EL Y EL+ K ++ ++++D Sbjct: 230 LLFVVDISGFQLSSQTQYRTAFETVILLTKELELYKEELQTKPALLAVNKMD 281 >gi|78070334|gb|AAI07715.1| GTP-binding protein 10 (putative) [Homo sapiens] Length = 387 Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 129/358 (36%), Positives = 192/358 (53%), Gaps = 63/358 (17%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 F+D+ +++ R GG+GG+ + R G GG+GGDVW+ A + L L D Sbjct: 15 FIDKLRLFTR---GGSGGMGYPRLG---------GEGGKGGDVWVVAQNRMTLKQLKDRY 62 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + F A G G+KG+D + VPVG V +E+G +I +L++E RI++A G Sbjct: 63 PGKRFVAGVGANSKISALKGSKGKDWEIPVPVGISVTDENG-KIIGELNKENDRILVAQG 121 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG K TN P + GQ++II L LKLIAD+G++G PNAGKS+ L+ V+ Sbjct: 122 GLGG------KLLTNFLP------LKGQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVS 169 Query: 181 RAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKP IADY FTTL P LG I+ +K+ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 170 HAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQ 229 Query: 240 LLHIVS----ALEENVQ--AAYQCIL---DELSAYNSELRKKIEIVGLSQIDTVDSDTLA 290 LL +V L + Q A++ I+ EL Y EL+ K ++ ++++D D+ Sbjct: 230 LLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQD-- 287 Query: 291 RKKNELATQCGQVPFEF----------------------SSITGHGIPQILECLHDKI 326 K +EL +Q Q P +F S++TG GI ++ C+ + Sbjct: 288 -KFHELMSQL-QNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSL 343 >gi|122692441|ref|NP_001073783.1| GTP-binding protein 10 [Bos taurus] gi|122139932|sp|Q3MHG6|GTPBA_BOVIN RecName: Full=GTP-binding protein 10 gi|75775299|gb|AAI05246.1| GTP-binding protein 10 (putative) [Bos taurus] Length = 387 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 120/336 (35%), Positives = 173/336 (51%), Gaps = 62/336 (18%) Query: 36 GGSGGRG-----------GDVWIQATS--NLNTLIDFRYQQHFKAQHGEKGMKRNRSGAK 82 GGSGG G GDVW+ A + L L D Q+ F A G G+K Sbjct: 25 GGSGGMGYPRLGGEGGKGGDVWVVAHNRMTLKQLKDKYPQKRFVAGEGANSRVSALKGSK 84 Query: 83 GEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYAN 142 G+D + VPVG V +E+G +I +L++E R+++A GG GG K TN P Sbjct: 85 GKDCEIPVPVGVSVTDENG-KIIGELNKEKDRLLVAEGGLGG------KLLTNFLP---- 133 Query: 143 PGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IV 201 + GQ+++I L LKLIADIG++G PNAGKS+ L+ ++ AKP IADY FTT+ P LG I+ Sbjct: 134 --LKGQKRVIHLDLKLIADIGLVGFPNAGKSSLLSKISHAKPAIADYAFTTIKPELGKIM 191 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCIL 259 +K+ +AD+PG+I+ AH G+G +FLKH ERT LL +V S + + Q Y+ Sbjct: 192 YSDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTKQLLFVVDISGFQLSSQTHYRTAF 251 Query: 260 D-------ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF----- 307 + EL Y EL K ++ ++++D D A+ K + Q P EF Sbjct: 252 ETIILLSKELELYKEELHTKPALLAVNKMDLPD----AQGKFHVLMNQLQNPKEFFHLFE 307 Query: 308 -----------------SSITGHGIPQILECLHDKI 326 S+ITG GI ++ C+ + Sbjct: 308 KNMIPERTVEFQHIIPISAITGEGIDELKNCIRKSL 343 >gi|139439733|ref|ZP_01773124.1| Hypothetical protein COLAER_02155 [Collinsella aerofaciens ATCC 25986] gi|133774883|gb|EBA38703.1| Hypothetical protein COLAER_02155 [Collinsella aerofaciens ATCC 25986] Length = 256 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 94/195 (48%), Positives = 135/195 (69%), Gaps = 5/195 (2%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F D +++ + GDGGAG +SFRRE F+ GGPDGG GGRGG+V IQA + L++LID+R+ Sbjct: 3 QFTDISRINVCGGDGGAGCMSFRREAFVPKGGPDGGDGGRGGNVVIQADAQLSSLIDYRF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEED-----GISLICDLDQEGQRII 116 + HF+A+ G G R+G GED++L VP+GT V E D + I DL +G+R++ Sbjct: 63 KHHFRAERGTHGQGARRNGKSGEDLILKVPMGTVVRELDPETQTPMFEIADLVHDGERVV 122 Query: 117 LAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFL 176 +APGG GG GN HF +S +AP +A G +E I L++KL+AD ++G P+ GKS+ + Sbjct: 123 VAPGGAGGLGNTHFVTSVRRAPAFAQLGEPAEEHWIELEMKLMADAALVGFPSVGKSSLI 182 Query: 177 ASVTRAKPKIADYPF 191 A ++ A+PKIADYPF Sbjct: 183 ARMSAARPKIADYPF 197 >gi|19115862|ref|NP_594950.1| mitochondrial GTPase Mtg2 [Schizosaccharomyces pombe 972h-] gi|74638883|sp|Q9UT06|YLWB_SCHPO RecName: Full=Uncharacterized GTP-binding protein P8A3.11c, mitochondrial; Flags: Precursor gi|5834796|emb|CAB55178.1| mitochondrial GTPase Mtg2 [Schizosaccharomyces pombe] Length = 419 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 121/348 (34%), Positives = 174/348 (50%), Gaps = 62/348 (17%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS-NLNTLIDFR 60 KF D+ ++ I+ GDGG G SF +EKF +G PDGG+GG GG V++ + N L Sbjct: 30 KFQDKIRIRIQGGDGGQGCSSFIKEKFRPYGPPDGGNGGDGGSVYVAVKPGSFNNLSHL- 88 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDG------------------- 101 Q KA +G G NR G+ G+ V+L VP GT + E Sbjct: 89 -SQIHKASNGTNGKGGNRHGSCGKSVILYVPPGTVIREISAVRSEQSLEWVQMPGKTKPP 147 Query: 102 ------ISLICDLDQEGQRI-------------------------ILAPGGNGGFGNAHF 130 IS + + + G+ + IL GG GG GN HF Sbjct: 148 KLKKGQISFVSEATRHGKELLYYRASSMISGAAEYSLEECDTTPQILCYGGVGGLGNVHF 207 Query: 131 KSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYP 190 S N++P +A G+ G++K+I L+LK I +IG++GLPNAGKST L +T +K K+ +Y Sbjct: 208 LSENNRSPKFATKGLTGEQKLIELELKTICEIGLVGLPNAGKSTLLNCLTASKSKVGEYE 267 Query: 191 FTTLYPNLGIVKEGYK------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 FTT+YP +G +K ++ LADIPGIIK A G G+G FL+H ER +L ++ Sbjct: 268 FTTIYPKIGTIKTTMPDDHSSFQYRLADIPGIIKGASDGKGLGYDFLRHVERAKMLCLVI 327 Query: 245 S---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 + A+Q + DEL+ Y L K+ +V ++ DT L Sbjct: 328 DINPKAKIPADQAFQLLWDELNKYEKNLINKVALVIANKADTAAEQDL 375 >gi|260812050|ref|XP_002600734.1| hypothetical protein BRAFLDRAFT_123502 [Branchiostoma floridae] gi|229286023|gb|EEN56746.1| hypothetical protein BRAFLDRAFT_123502 [Branchiostoma floridae] Length = 569 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 104/292 (35%), Positives = 156/292 (53%), Gaps = 37/292 (12%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSN--LNTLIDFR 60 F+D+ +VY+R G GG G + G GG GG V A + L +ID Sbjct: 19 FVDKLRVYVRGGSGGMGLPKYN------------GRGGDGGHVIFVAKEDMTLKQVIDST 66 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + F A G +R G KG ++ + VP G + D +I L+Q G + +A G Sbjct: 67 PNKRFIAGIGANASRRAIQGDKGHNLTVEVPTGITLLT-DTKQVIATLNQPGDQATVAKG 125 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG + F GQ + + L+LKLI+DIG++G PNAGKST L +V+ Sbjct: 126 GAGGAHWSDFHPKK------------GQIRSVTLELKLISDIGLVGFPNAGKSTLLKAVS 173 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PKIADYPFTT+ P +GI++ + + LAD+PG+I+ AH AG+G FL+H ERT + Sbjct: 174 SADPKIADYPFTTMRPQIGIIQYQDLRRVSLADLPGLIEGAHHNAGMGHHFLRHVERTKL 233 Query: 240 LLHIVS------ALEENVQAAYQCI---LDELSAYNSELRKKIEIVGLSQID 282 LL +V +++ + A+Q + + EL Y S+L K ++ +++ID Sbjct: 234 LLFMVDVHGFILSMKHPHRTAFQTVALLMKELELYKSDLVDKPAVLAINKID 285 >gi|260786159|ref|XP_002588126.1| hypothetical protein BRAFLDRAFT_87647 [Branchiostoma floridae] gi|229273284|gb|EEN44137.1| hypothetical protein BRAFLDRAFT_87647 [Branchiostoma floridae] Length = 383 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 105/281 (37%), Positives = 167/281 (59%), Gaps = 5/281 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +V + G GG G +F RE FGGP GG GG GG++ I+A + +L + + Sbjct: 39 FVDWRRVSVEGGKGGNGCSAFIREFGRPFGGPGGGDGGSGGNIVIKANKRVKSLA--KVK 96 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +KA++G G + G V+ VPVGT +E+G +++ DL++ G +++A GG Sbjct: 97 SIYKAENGSPGRNNSCHGKNASHTVIPVPVGT-CIKENG-NVVIDLERNGDAVVVAHGGL 154 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S+ ++AP A G G++ ++ L+L+ IA +G++G PNAGKST L +++RA Sbjct: 155 GGKGNQFFLSNEDKAPTLATAGESGEKCVLDLELRTIAHVGLVGFPNAGKSTLLRAISRA 214 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P +A YPFTTL P++GI++ E +++ +ADIPG+I+ AH G+G FL+H ER LL Sbjct: 215 QPTVAAYPFTTLKPHVGIIQYEDFEQVAVADIPGLIRGAHLNKGLGHSFLRHIERCRFLL 274 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 +V ++ EL Y S L + +++D Sbjct: 275 FVVDLSVREPWTQVDDLMYELEIYQSGLSSRPHAAVANKMD 315 >gi|281346743|gb|EFB22327.1| hypothetical protein PANDA_009067 [Ailuropoda melanoleuca] Length = 332 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 115/287 (40%), Positives = 169/287 (58%), Gaps = 14/287 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWI------QATSNLNTL 56 F+D +V + G GG G F E EFGGPDGG GG GG V + Q +L+++ Sbjct: 4 FVDHRRVLVCGGRGGDGVSCFHSEPRKEFGGPDGGDGGNGGHVVLRGMCSDQQVKSLSSV 63 Query: 57 IDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRII 116 + RYQ HGE G ++N SG G + + VPVGT V ++G ++ DL G I Sbjct: 64 LS-RYQ----GAHGEAGGRKNCSGRSGAVLYVRVPVGTLV--KEGKEVVADLSCPGDEYI 116 Query: 117 LAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFL 176 A GG GG GN F ++ N+AP PG GQ++I++L+LK +A G++G PNAGKS+ L Sbjct: 117 AALGGAGGKGNRFFLANDNRAPVTCTPGEPGQQRILFLELKTVAHAGMVGFPNAGKSSLL 176 Query: 177 ASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTE 235 +++ A+P +A YPFTTL P++GIV E +++ +ADIPGI++ AHQ G+G FL+H E Sbjct: 177 RAISNARPAVASYPFTTLKPHVGIVHCEDHQQIAVADIPGIVRGAHQNRGLGSTFLRHIE 236 Query: 236 RTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 R LL +V E + + EL Y + L ++ ++ ++ID Sbjct: 237 RCRFLLFVVDLSEPEPWTQVEDLKSELEKYEAGLSERPHVIVANKID 283 >gi|195616472|gb|ACG30066.1| small GTP-binding protein domain [Zea mays] Length = 507 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 110/334 (32%), Positives = 167/334 (50%), Gaps = 54/334 (16%) Query: 2 KFLDEAKVYIRSGDGGAGGI----------------SFRR----EKFIEFGGPDGGS--- 38 K+ D A V +R+GDGG G + F R K + + GS Sbjct: 78 KYFDHAVVTVRAGDGGHGAVLAMPPAPSADAAKPRGRFNRGEKKSKKVSYKRNYDGSVAL 137 Query: 39 --GGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKG-------MKRNRSGAKGEDVVLT 89 GG GGDV + A TL+ F + + A+ G R SG G+ + + Sbjct: 138 PTGGHGGDVVVYADEAEETLLRFHEKARYCAKRGGNVGAAGGTLSSRMHSGFAGKTLRIP 197 Query: 90 VPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGIL--- 146 VPVGT V + G +++ DL +++A GG GG + +P I+ Sbjct: 198 VPVGTVVKRKKG-AVLADLAHHCDEVLVARGGQGGISLIDVPEYKRRKAMALSPNIMRDT 256 Query: 147 ----------GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP 196 G+E + L L+++AD+G++GLPNAGKST L+++T A+P IADYPFTTL P Sbjct: 257 SDKVLTHGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLSAITLARPDIADYPFTTLMP 316 Query: 197 NLGIVK--------EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 NLG + + E LAD+PG+I+ AH G G+G FL+H RT V++H+V A Sbjct: 317 NLGRLGGDPALGALQFSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRVIVHVVDAAA 376 Query: 249 ENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 ++ Y+ + +EL YN + ++ +V L++ID Sbjct: 377 DDPVNDYKIVREELRMYNPQYLERPYVVVLNKID 410 >gi|196003358|ref|XP_002111546.1| hypothetical protein TRIADDRAFT_24567 [Trichoplax adhaerens] gi|190585445|gb|EDV25513.1| hypothetical protein TRIADDRAFT_24567 [Trichoplax adhaerens] Length = 322 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 111/282 (39%), Positives = 174/282 (61%), Gaps = 5/282 (1%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ I G GGAG +SF R + GGPDGG GG GGDV QA + TL Sbjct: 2 RFIDWRRIRIMGGSGGAGCVSFFRAANLPKGGPDGGDGGDGGDVIFQADHGVRTLEPI-- 59 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 +K ++G +G R R G +GE++++ VP+GT VF+ED +I DL ++ + + GG Sbjct: 60 GNLYKGKNGGRGTSRYRRGHRGENLIVKVPLGT-VFKEDS-EIIADLCKQDELFVACKGG 117 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 +GG GN F + TN+ P A G G+E+++ +++ IAD+G++G PNAGKST L +++R Sbjct: 118 SGGNGNVSFVTPTNRLPREATEGTPGEERLLEAEMQTIADVGLVGFPNAGKSTLLRALSR 177 Query: 182 AKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKP +A YPFTT P++G+++ E Y + +ADIPG++ AH+ G+G FL+H ER L Sbjct: 178 AKPAVAAYPFTTRNPHVGVIEYEDYMQIAVADIPGLVVGAHKNVGLGHSFLRHIERCRGL 237 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 L+++ A ++ + + + EL Y L + V ++ID Sbjct: 238 LYVIDAADDELCNQLEALHFELEQYQEGLSARSPAVVANKID 279 >gi|177773088|gb|ACB73282.1| hypothetical protein [Rhinolophus ferrumequinum] Length = 581 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 119/354 (33%), Positives = 184/354 (51%), Gaps = 55/354 (15%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 F+D +++ R GG+GG+ + R G GDVW+ A + L L D Sbjct: 209 FIDNLRLFTR---GGSGGMGYPRLGGEGGKG---------GDVWVVAHNKMTLKQLKDKY 256 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ F A G G+KG+D + VPVG V +E+G +I +L++E RI++A G Sbjct: 257 PKKRFVAGEGANSRVSALKGSKGKDCEIPVPVGISVTDENG-KIIGELNKEKDRILVAEG 315 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG K TN P + GQ+++I L LKLIAD+G++G PNAGKS+ L+ ++ Sbjct: 316 GLGG------KLFTNFLP------LKGQKRVIHLDLKLIADVGLVGFPNAGKSSLLSQIS 363 Query: 181 RAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKP+IADY FTTL P LG I+ +K+ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 364 HAKPEIADYAFTTLKPELGKIMYNDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTKQ 423 Query: 240 LLHIV--SALEENVQAAYQCILD-------ELSAYNSELRKKIEIVGLSQIDTVDSDTLA 290 LL +V S + + Q Y+ + EL Y E++ K ++ ++++D D+ Sbjct: 424 LLFVVDISGFQLSSQTQYRTAFETIILLTKELELYKEEVQTKPALLAVNKMDLPDAQNKF 483 Query: 291 R----------------KKNELATQCGQVP--FEFSSITGHGIPQILECLHDKI 326 R +KN + Q + S+IT GI ++ C+ + Sbjct: 484 RVLMNQLQNPKDFLHLFEKNMIPAQIMEFQHIIPTSAITREGIDELKNCIRTSL 537 >gi|332265101|ref|XP_003281564.1| PREDICTED: GTP-binding protein 5-like isoform 1 [Nomascus leucogenys] Length = 406 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 123/328 (37%), Positives = 181/328 (55%), Gaps = 14/328 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTL--IDFR 60 F+D +V + G+GGAG F E EFGGPDGG GG GG V ++ + +L + R Sbjct: 72 FVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDPQVKSLSSVLSR 131 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ GE G +N G G + + VPVGT V E + + DL G + A G Sbjct: 132 YQ----GISGEDGGSKNCFGRSGAVLYIRVPVGTLVKERGRV--VADLSCVGDEYVAALG 185 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F ++ N+AP PG GQ++++ L+LK +A G++G PNAGKS+ L +++ Sbjct: 186 GAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLQLELKTVAHAGMVGFPNAGKSSLLRAIS 245 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P +A YPFTTL P++GIV EG+++ +ADIPGII+ AHQ G+G FL+H ER Sbjct: 246 NARPAVASYPFTTLKPHVGIVHYEGHQQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRF 305 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LL +V + + EL Y L ++ + ++ID ++ ++L Sbjct: 306 LLFVVDLSQPEPWTQVDDLKYELEMYEKGLSERPHAIIANKIDLPEAQA---NLSQLQDH 362 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIF 327 GQ S++TG + Q+L LH K+ Sbjct: 363 LGQEVIVLSALTGENLEQLL--LHLKVL 388 >gi|156543597|ref|XP_001604177.1| PREDICTED: similar to Putative GTP-binding protein 5 [Nasonia vitripennis] Length = 384 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 111/281 (39%), Positives = 175/281 (62%), Gaps = 4/281 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +V ++ G GG G ISF + E GPDGG GG GG V Q ++++ L Sbjct: 75 FVDMKQVRVQGGKGGDGAISFLQLWVNERAGPDGGDGGHGGHVIFQVSADVKDLSTV--S 132 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +A+ GE G ++ G + ++ VPVGT V + +G +++ DLD+EG I A GG Sbjct: 133 SVLEAESGEDGHNKDCFGKNAKHNIIKVPVGTIVRDTEG-TILADLDEEGMMYIAARGGA 191 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GNA FKS+ NQ+P + G G+ K L+++ +A +G+IGLPNAGKST L +++RA Sbjct: 192 GGHGNAFFKSNMNQSPKISEYGAEGESKQYVLEVRSMAHVGLIGLPNAGKSTLLRAISRA 251 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PK+A YPFTTL P++G+++ + Y++ +AD+PG+I ++H+ G+G FLKH ER LL Sbjct: 252 RPKVASYPFTTLRPHIGMIQYDDYEQIAVADLPGLIPDSHKNKGLGITFLKHAERCAALL 311 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 IV +E ++ + E+S +N +L + I+ +++D Sbjct: 312 FIVDLTQEEPWTHFEILQYEISQFNDKLNDRPMIIIANKVD 352 >gi|24308117|ref|NP_056481.1| GTP-binding protein 5 [Homo sapiens] gi|32469779|sp|Q9H4K7|GTPB5_HUMAN RecName: Full=GTP-binding protein 5; AltName: Full=Protein obg homolog 1; Short=ObgH1 gi|12314026|emb|CAC04015.1| GTP binding protein 5 (putative) [Homo sapiens] gi|22477163|gb|AAH36716.1| GTP binding protein 5 (putative) [Homo sapiens] gi|312151420|gb|ADQ32222.1| GTP binding protein 5 (putative) [synthetic construct] Length = 406 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 124/328 (37%), Positives = 181/328 (55%), Gaps = 14/328 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTL--IDFR 60 F+D +V + G+GGAG F E EFGGPDGG GG GG V ++ + +L + R Sbjct: 72 FVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSR 131 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ GE G +N G G + + VPVGT V ++G ++ DL G I A G Sbjct: 132 YQ----GFSGEDGGSKNCFGRSGAVLYIRVPVGTLV--KEGGRVVADLSCVGDEYIAALG 185 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F ++ N+AP PG GQ++++ L+LK +A G++G PNAGKS+ L +++ Sbjct: 186 GAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAIS 245 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P +A YPFTTL P++GIV EG+ + +ADIPGII+ AHQ G+G FL+H ER Sbjct: 246 NARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRF 305 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LL +V + + EL Y L + + ++ID ++ ++L Sbjct: 306 LLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQA---NLSQLRDH 362 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIF 327 GQ S++TG + Q+L LH K+ Sbjct: 363 LGQEVIVLSALTGENLEQLL--LHLKVL 388 >gi|114682912|ref|XP_001143281.1| PREDICTED: GTP binding protein 5 isoform 1 [Pan troglodytes] gi|114682914|ref|XP_514816.2| PREDICTED: GTP-binding protein 5 isoform 2 [Pan troglodytes] Length = 406 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 124/328 (37%), Positives = 181/328 (55%), Gaps = 14/328 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTL--IDFR 60 F+D +V + G+GGAG F E EFGGPDGG GG GG V ++ + +L + R Sbjct: 72 FVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSR 131 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ GE G +N G G + + VPVGT V ++G ++ DL G I A G Sbjct: 132 YQ----GFSGEDGGSKNCFGRSGAVLYIRVPVGTLV--KEGGRVVADLSCVGDEYIAALG 185 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F ++ N+AP PG GQ++++ L+LK +A G++G PNAGKS+ L +++ Sbjct: 186 GAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAIS 245 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P +A YPFTTL P++GIV EG+ + +ADIPGII+ AHQ G+G FL+H ER Sbjct: 246 NARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRF 305 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LL +V + + EL Y L + + ++ID ++ ++L Sbjct: 306 LLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQA---NLSQLQDH 362 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIF 327 GQ S++TG + Q+L LH K+ Sbjct: 363 LGQEVIVLSALTGENLEQLL--LHLKVL 388 >gi|7022959|dbj|BAA91783.1| unnamed protein product [Homo sapiens] Length = 401 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 124/328 (37%), Positives = 181/328 (55%), Gaps = 14/328 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTL--IDFR 60 F+D +V + G+GGAG F E EFGGPDGG GG GG V ++ + +L + R Sbjct: 72 FVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSR 131 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ GE G +N G G + + VPVGT V ++G ++ DL G I A G Sbjct: 132 YQ----GFSGEDGGSKNCFGRSGAVLYIRVPVGTLV--KEGGRVVADLSCVGDEYIAALG 185 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F ++ N+AP PG GQ++++ L+LK +A G++G PNAGKS+ L +++ Sbjct: 186 GAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAIS 245 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P +A YPFTTL P++GIV EG+ + +ADIPGII+ AHQ G+G FL+H ER Sbjct: 246 NARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRF 305 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LL +V + + EL Y L + + ++ID ++ ++L Sbjct: 306 LLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQA---NLSQLRDH 362 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIF 327 GQ S++TG + Q+L LH K+ Sbjct: 363 LGQEVIVLSALTGENLEQLL--LHLKVL 388 >gi|125851418|ref|XP_001336634.1| PREDICTED: GTP-binding protein 5 [Danio rerio] Length = 369 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 103/285 (36%), Positives = 165/285 (57%), Gaps = 5/285 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ +V +++G GG G SF E E+GGPDGG GG GG + I+ + +L Sbjct: 42 FVDQRRVRLQAGSGGKGASSFHSEPRKEWGGPDGGDGGAGGHIIIRVNRQVKSLSSV--S 99 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++ + GE G +N G ++VPVGT V E G+ ++ DL Q+ Q++ +A GG Sbjct: 100 TVYRGRDGEAGGSKNCFGRNANPTYISVPVGT-VVREQGV-VLADLSQQDQQVTVAYGGA 157 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++ N+AP A G GQ++ I L+L+ +A ++G PN GKS+ L ++++A Sbjct: 158 GGKGNRSFLTNENRAPMRATEGQQGQQREIQLELRTMAHAALVGFPNVGKSSLLRAISKA 217 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P +A YPFTTL P++GIV+ + + +ADIPG+I AH G+G FL+H ER VLL Sbjct: 218 RPAVAAYPFTTLNPHVGIVEYRDHTQVAVADIPGLIPGAHLNRGLGLSFLRHIERCRVLL 277 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 +++ +Q + EL Y ++ + +++D +S Sbjct: 278 YVLDMSSPEPWEQFQQLCFELDQYRPLFSQRPHAIVANKMDLPES 322 >gi|296200857|ref|XP_002747783.1| PREDICTED: GTP-binding protein 5-like [Callithrix jacchus] Length = 406 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 123/328 (37%), Positives = 183/328 (55%), Gaps = 14/328 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTL--IDFR 60 F+D +V + G+GGAG F E EFGGPDGG GG GG V ++ + +L + R Sbjct: 72 FVDCRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSR 131 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ +GE G +N G G + + VPVGT V ++G ++ DL G I A G Sbjct: 132 YQ----GFNGEDGGSKNCFGRSGAVLYIQVPVGTLV--KEGNRVVADLAHLGDEYIAALG 185 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN F ++ N+AP PG GQ++++ L+LK +A G++G PNAGKS+ L +++ Sbjct: 186 GAGGKGNRFFLANDNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRALS 245 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P +A YPFTTL P++GIV EG+++ +ADIPG+I+ AHQ G+G FL+H ER Sbjct: 246 NARPAVASYPFTTLKPHVGIVHYEGHQQIAVADIPGLIRGAHQNRGLGSAFLRHIERCCF 305 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LL +V + EL Y L ++ + ++ID ++ ++L Sbjct: 306 LLFVVDLSLPEPWTQVDDLKYELEMYEEGLSERPHAIVANKIDLPEAQA---NLSQLRDH 362 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIF 327 GQ S++TG + Q+L LH K+ Sbjct: 363 MGQEVIALSAVTGENLEQLL--LHLKVL 388 >gi|149918343|ref|ZP_01906834.1| GTP-binding protein [Plesiocystis pacifica SIR-1] gi|149820869|gb|EDM80278.1| GTP-binding protein [Plesiocystis pacifica SIR-1] Length = 487 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 91/234 (38%), Positives = 141/234 (60%), Gaps = 10/234 (4%) Query: 104 LICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIG 163 LI DL G R+++A GG GG GN HF+SSTN+ P A PG G+ + + L+LKL+AD+G Sbjct: 249 LIGDLQDHGDRLLVARGGRGGRGNIHFRSSTNRTPDRAEPGTEGEARWLRLELKLLADVG 308 Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQ 222 I+G PN GKST ++S++RA+P+I YPFTTL P LG+V + ++AD+PG++ A + Sbjct: 309 IVGYPNVGKSTLISSISRARPEIGAYPFTTLTPQLGVVSLSDERTMVVADVPGLVDGASE 368 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD------ELSAYNSELRKKIEIV 276 G G+G FL+H ERT VLLH+++ + + ++D EL Y S + +V Sbjct: 369 GRGLGHEFLRHLERTRVLLHLLAP---DPTEGREPLVDLEALEGELRRYGSMFDGRPRVV 425 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 L++IDT + + + R+ + F ++TG G +LE L ++ +R Sbjct: 426 ALNKIDTPEGEAMIRRTRRALRKRNIPLFPICAVTGEGTEALLEALWRRLVLVR 479 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 46/99 (46%), Positives = 67/99 (67%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D ++ + +GDGG G +++RRE + GGP GG GG GGD+W+ A L+TL+D + Sbjct: 1 MRFIDRVRIQVCAGDGGNGAVAWRREAHVPKGGPAGGDGGNGGDIWLVADEGLSTLLDLK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEE 99 Y+QH +AQ G G ++G GED V+ VPVGT V+ E Sbjct: 61 YRQHHRAQPGRAGAGAGKNGRGGEDWVIKVPVGTAVYFE 99 >gi|322783664|gb|EFZ11002.1| hypothetical protein SINV_04026 [Solenopsis invicta] Length = 645 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 116/288 (40%), Positives = 174/288 (60%), Gaps = 6/288 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY- 61 F+D V G+GG G ISF R + GPDGG GG GG V +A ++ D R+ Sbjct: 314 FVDIKSVRTIGGNGGDGQISFLRLWVNDRAGPDGGDGGHGGHVIFEAKMDVK---DLRHI 370 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 KA++GEKG ++ G E V+ VP+GT V + DG ++ DLD+EG I A GG Sbjct: 371 NSMIKAENGEKGYNKDCFGKNAEHNVVKVPIGTIVRDVDG-KILADLDKEGMMFIAARGG 429 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA FKS T Q P G +G+ L+++ +A IG+IGLPNAGKST L +++R Sbjct: 430 AGGHGNAFFKSDTQQTPEICEYGAVGENLQYVLEVRSMAHIGLIGLPNAGKSTLLRAISR 489 Query: 182 AKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A+PKIA YPFTTL P++G+++ + Y++ +AD+PG+I+++H+ G+G FLKH ER L Sbjct: 490 ARPKIAAYPFTTLKPHIGMIQYDDYEQVAVADMPGLIEDSHKNRGLGITFLKHAERCAAL 549 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT 288 + I+ + A + + E++ +N L + I+ ++ID D++ Sbjct: 550 IFILDVTQNEPWEALEILKYEINQFNKNLNDRPHIIVANKIDLPDAEV 597 >gi|256825001|ref|YP_003148961.1| GTPase ObgE [Kytococcus sedentarius DSM 20547] gi|256688394|gb|ACV06196.1| GTP-binding protein Obg/CgtA [Kytococcus sedentarius DSM 20547] Length = 500 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 123/324 (37%), Positives = 184/324 (56%), Gaps = 12/324 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +++ +G GG G S REKF GGPDGG+GG GGDV ++ + TL+++ Sbjct: 4 FVDRVVLHLAAGKGGHGVASVHREKFKPLGGPDGGNGGHGGDVLLEVDDQVTTLLEYHRG 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H A +G+ G R+GA GE +VL VP GT V + G ++ DL G + + A GG Sbjct: 64 PHRSAPNGQPGEGDERNGAAGEHLVLRVPDGTVVKDRAG-EVLADLVGHGTQFVAARGGR 122 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN S +AP +A G G+E+ + L+LK +AD+ +IG P+AGKS+ ++ ++ A Sbjct: 123 GGLGNKALASRRRKAPGFALLGEPGEERELVLELKTLADVALIGFPSAGKSSLVSVLSSA 182 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 +PKIA+YPFTTL PNLG+V G F +AD+PG+I A QG G+G FL+H ER VL+H Sbjct: 183 RPKIAEYPFTTLVPNLGVVTAGDDRFTVADVPGLIPGAAQGKGLGLEFLRHVERCGVLVH 242 Query: 243 IV--SALE--ENVQAAYQCILDELSAYNSE-------LRKKIEIVGLSQIDTVDSDTLAR 291 +V + LE + I EL Y + L ++ +V L++ D ++ LA Sbjct: 243 VVDCATLEPGRDPLTDLDVIEAELRQYVPDQALGGRPLSERTRVVVLNKADVPEARELAE 302 Query: 292 KKNELATQCGQVPFEFSSITGHGI 315 + + G S++ G+ Sbjct: 303 MVEPMLVERGVEVHIVSAVAHQGL 326 >gi|119597285|gb|EAW76879.1| hypothetical protein, isoform CRA_b [Homo sapiens] Length = 361 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 124/349 (35%), Positives = 184/349 (52%), Gaps = 71/349 (20%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 F+D+ +++ R GG+GG+ + R G GG+GGDVW+ A + L L D Sbjct: 15 FIDKLRLFTR---GGSGGMGYPRLG---------GEGGKGGDVWVVAQNRMTLKQLKDRY 62 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ F A G G+KG+D + VPVG V +E+G +I +L++E RI++A G Sbjct: 63 PRKRFVAGVGANSKISALKGSKGKDCEIPVPVGISVTDENG-KIIGELNKENDRILVAQG 121 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG K TN P + GQ++II L LKLIAD+G++G PNAGKS+ L+ V+ Sbjct: 122 GLGG------KLLTNFLP------LKGQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVS 169 Query: 181 RAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKP IADY FTTL P LG I+ +K+ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 170 HAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQ 229 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 LL + EL Y EL+ K ++ ++++D D+ K +EL +Q Sbjct: 230 LLFV-----------------ELELYKEELQTKPALLAVNKMDLPDAQD---KFHELMSQ 269 Query: 300 CGQVPFEF----------------------SSITGHGIPQILECLHDKI 326 Q P +F S++TG GI ++ C+ + Sbjct: 270 L-QNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSL 317 >gi|209571724|gb|ACI62514.1| GTP-binding protein 10 (predicted) [Oryctolagus cuniculus] Length = 365 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 119/332 (35%), Positives = 170/332 (51%), Gaps = 54/332 (16%) Query: 36 GGSGGRG-----------GDVWIQATS--NLNTLIDFRYQQHFKAQHGEKGMKRNRSGAK 82 GGSGG G GDVW+ A + L L D Q+ F A G G+K Sbjct: 25 GGSGGMGYPRLGGEGGKGGDVWVVAHTKMTLKQLRDKYPQKRFVAGAGANSRVSALKGSK 84 Query: 83 GEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYAN 142 G+D + PVG V +E+G +I +L++E RI++A GG GG K TN P Sbjct: 85 GKDCEIPAPVGISVKDENG-KIIGELNKEEDRILVAEGGLGG------KLLTNFLP---- 133 Query: 143 PGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IV 201 + GQ++II L LKL AD+G++G PNAGKS+ L+ V+ AKP IADY FTTL P LG I+ Sbjct: 134 --LKGQKRIIHLDLKLTADVGLVGFPNAGKSSLLSRVSHAKPAIADYAFTTLKPQLGKIM 191 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCIL 259 YK+ +AD+PG+I+ AH G+G +FLKH ERT LL +V S + + Q Y+ Sbjct: 192 YSDYKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRHLLFVVDISGFQLSSQTLYRTAF 251 Query: 260 D-------ELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA-------------- 297 + EL Y EL+ K ++ ++++D + D N+L Sbjct: 252 ETIILLTKELELYKEELQTKPALLAVNKMDLPGARDKFQDLMNQLQNPKDFLHLCERSMI 311 Query: 298 ---TQCGQVPFEFSSITGHGIPQILECLHDKI 326 T Q S++TG GI ++ C+ + Sbjct: 312 PERTMAFQHIIPVSAVTGEGIEELKNCIRKSL 343 >gi|168986660|gb|ACA35055.1| GTPBP10 protein (predicted) [Callicebus moloch] Length = 359 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 112/317 (35%), Positives = 168/317 (52%), Gaps = 51/317 (16%) Query: 44 DVWIQATS--NLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDG 101 DVW+ A + L L D Q+ F A G G+KG+D + VPVG + +E+G Sbjct: 15 DVWVVAQNRMTLKQLKDRYPQKRFVAGVGANSRISALKGSKGKDCEIPVPVGISITDENG 74 Query: 102 ISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIAD 161 +I +L +E RI++A GG GG K TN P + GQ+++I L LKLIAD Sbjct: 75 -KIIGELSKEDDRILVAEGGLGG------KLLTNFLP------LKGQKRVIHLDLKLIAD 121 Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNA 220 +G++G PNAGKS+ L+ ++ AKP IADY FTTL P LG I+ +K+ +AD+PG+I+ A Sbjct: 122 VGLVGFPNAGKSSLLSQISHAKPAIADYAFTTLKPELGKIMYNDFKQISVADLPGLIEGA 181 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVS------ALEENVQAAYQCIL---DELSAYNSELRK 271 H G+G +FLKH ERT LL +V + + A++ I+ EL Y EL+ Sbjct: 182 HMNKGMGHKFLKHIERTRQLLFVVDISGFQLSYRTQYRTAFETIILLTKELELYKEELQT 241 Query: 272 KIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF----------------------SS 309 K ++ ++++D D+ K +EL Q Q P +F S+ Sbjct: 242 KPTLLAVNKMDLPDAQD---KFHELMNQL-QNPKDFLHLFGKNMIPERTVEFQHIIPISA 297 Query: 310 ITGHGIPQILECLHDKI 326 +TG GI ++ C+ + Sbjct: 298 VTGEGIEELKNCIRKSL 314 >gi|289606542|emb|CBI61146.1| unnamed protein product [Sordaria macrospora] Length = 164 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 89/164 (54%), Positives = 118/164 (71%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M FLD+AK+++RSG GG G +SFRREKF+E+GGPDGG+GG+GGD+ +A LNTLIDFR Sbjct: 1 MHFLDQAKIFVRSGGGGPGAVSFRREKFMEYGGPDGGNGGKGGDIIFEAVPGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y QHF+A G G NR+G G D+++ VPVGTQV ED +++ D + GQR + G Sbjct: 61 YTQHFRAPRGSGGSGANRTGPGGRDLIIRVPVGTQVLSEDKETVLADFTRPGQREVFLRG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 G+GG GNA +K+STN+AP G G E +WL+LKL+AD G+ Sbjct: 121 GDGGRGNASYKTSTNRAPRQHGTGWPGDEAWVWLRLKLLADAGL 164 >gi|308806365|ref|XP_003080494.1| putative GTP-binding protein (ISS) [Ostreococcus tauri] gi|116058954|emb|CAL54661.1| putative GTP-binding protein (ISS) [Ostreococcus tauri] Length = 532 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 102/328 (31%), Positives = 173/328 (52%), Gaps = 31/328 (9%) Query: 26 EKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQ---HGEK------GMKR 76 +K+IE + GGRGG+V+++ ++L+ ++ ++A+ HG G +R Sbjct: 194 KKYIELPAAEPADGGRGGNVYLRVDRTCDSLLHLHERKTWRAKKGYHGSAADYAAGGRER 253 Query: 77 NRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAH----FKS 132 +R E + + VP GT V + L+ D+ + GQ +++A G F++ Sbjct: 254 HRVAPDQEHMYIPVPPGTVVRRKRTGELLGDMTKHGQTLLVAEAKAGEPSPKRQAEDFEA 313 Query: 133 S---TNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADY 189 S + A ++ G G+E I L ++++AD G++GLPN GKS+ L +VTRA P+IA+Y Sbjct: 314 SDIAIDTASLVSSAGEAGEELSIELLMRVVADCGLVGLPNVGKSSLLKAVTRASPEIANY 373 Query: 190 PFTTLYPNLGIVK-------EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 FTTL PNLG++K G ++AD+PG+I+ AH+G G+G FL+H RT ++ Sbjct: 374 AFTTLMPNLGVIKTEDDLAPTGESSTVMADLPGLIQGAHKGLGLGRAFLRHLRRTRAMVC 433 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID----TVDSDTLARKKNELAT 298 +V A ++ Y + EL YN E ++ I+ L+++D + +D L + L Sbjct: 434 VVDASGQDPLNDYVVVRQELKLYNPEYVQRPHILVLNKMDIEWAALRTDELMQGVEALNE 493 Query: 299 QCGQVP----FEFSSITGHGIPQILECL 322 VP S+ G G+P+ +E L Sbjct: 494 DMIGVPPVAVLPISAKEGTGVPEFMEAL 521 >gi|295394995|ref|ZP_06805207.1| Spo0B-associated GTP-binding protein [Brevibacterium mcbrellneri ATCC 49030] gi|294972154|gb|EFG48017.1| Spo0B-associated GTP-binding protein [Brevibacterium mcbrellneri ATCC 49030] Length = 487 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 120/311 (38%), Positives = 177/311 (56%), Gaps = 14/311 (4%) Query: 21 ISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSG 80 +S RREKF GGPDG +GG GGDV ++ TL+ F H KA++G G R G Sbjct: 1 MSVRREKFKPLGGPDGANGGDGGDVILRVDDQTTTLLPFHRSPHRKAENGGVGKGDLRHG 60 Query: 81 AKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYY 140 GE++VL VP G+ V +DG ++ DL G I A GG GG GNA S+ +AP + Sbjct: 61 VNGENLVLLVPEGSVVKTKDG-HVLADLMGIGTEFIAARGGRGGLGNAALASTKRKAPGF 119 Query: 141 ANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI 200 A G G+E+ + L++K +ADI ++G P+AGKS+ +A+++ A+PKIADYPFTTL PNLG+ Sbjct: 120 ALLGEPGEERELVLEIKSVADIALVGFPSAGKSSLIAALSAARPKIADYPFTTLKPNLGV 179 Query: 201 VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL----EENVQAAYQ 256 V+ G F +AD+PG+I A QG G+G FL+H ER L+H++ + + + Sbjct: 180 VEAGDVRFTVADVPGLIPGAAQGRGLGLEFLRHIERCAALVHVIDMATWESDRDPVSDLH 239 Query: 257 CILDELSAYNSE---------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF 307 I EL+ Y E L K+ +V L++ D D ++ G FE Sbjct: 240 AIEAELAEYEVEVDPSGDLLPLSKRPALVTLNKTDLPDGQDMSDMVRSELEAAGYRTFEI 299 Query: 308 SSITGHGIPQI 318 S+++ G+ ++ Sbjct: 300 SAVSHKGLKEL 310 >gi|171912891|ref|ZP_02928361.1| GTP-binding protein Obg/CgtA [Verrucomicrobium spinosum DSM 4136] Length = 345 Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 117/296 (39%), Positives = 167/296 (56%), Gaps = 16/296 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ +V+ R+G GG G F R KF GGPDGG GG GG+V +Q + ++L F Y Sbjct: 2 FVDQIRVFARAGRGGDGSAHFHRGKFRPKGGPDGGDGGNGGNVILQVDPSTDSLRTFFYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV------FEEDG------ISLICDLDQ 110 A+ G+ G +G G V VP G V F+E+ + + DL + Sbjct: 62 AKMVAEDGKPGAGAQCTGRSGSHGVYKVPPGLLVSRIEERFDEETGEMVTETTPVADLTE 121 Query: 111 EGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNA 170 GQ +L GG GG GN HFKS TNQAP PG G+ +L+ IAD G++G PNA Sbjct: 122 TGQEYVLCKGGKGGKGNVHFKSPTNQAPKEFTPGTDGESGFYHFELRSIADAGLVGFPNA 181 Query: 171 GKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDR 229 GKST L ++ AKPKIA+YPFTTL P++G+V+ + +ADIPG+I+ AH G+G Sbjct: 182 GKSTLLTKLSHAKPKIANYPFTTLQPHVGVVEFTETRRGTVADIPGLIEGAHANVGLGHD 241 Query: 230 FLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 FL+H R +LL +V + + A + +E+S Y+SEL K+ + +++D Sbjct: 242 FLRHIMRCRILLFVVDTPGSEGRDPIADISTLREEISLYSSELAKRPWCILANKMD 297 >gi|291394845|ref|XP_002713748.1| PREDICTED: GTP-binding protein 10 [Oryctolagus cuniculus] Length = 584 Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 119/332 (35%), Positives = 170/332 (51%), Gaps = 54/332 (16%) Query: 36 GGSGGRG-----------GDVWIQATS--NLNTLIDFRYQQHFKAQHGEKGMKRNRSGAK 82 GGSGG G GDVW+ A + L L D Q+ F A G G+K Sbjct: 25 GGSGGMGYPRLGGEGGKGGDVWVVAHTKMTLKQLRDKYPQKRFVAGAGANSRVSALKGSK 84 Query: 83 GEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYAN 142 G+D + PVG V +E+G +I +L++E RI++A GG GG K TN P Sbjct: 85 GKDCEIPAPVGISVKDENG-KIIGELNKEEDRILVAEGGLGG------KLLTNFLP---- 133 Query: 143 PGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IV 201 + GQ++II L LKL AD+G++G PNAGKS+ L+ V+ AKP IADY FTTL P LG I+ Sbjct: 134 --LKGQKRIIHLDLKLTADVGLVGFPNAGKSSLLSRVSHAKPAIADYAFTTLKPQLGKIM 191 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCIL 259 YK+ +AD+PG+I+ AH G+G +FLKH ERT LL +V S + + Q Y+ Sbjct: 192 YSDYKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRHLLFVVDISGFQLSSQTHYRTAF 251 Query: 260 D-------ELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELA-------------- 297 + EL Y EL+ K ++ ++++D + D N+L Sbjct: 252 ETIILLTKELELYKEELQTKPALLAVNKMDLPGARDKFQDLMNQLQNPKDFLHLFERSMI 311 Query: 298 ---TQCGQVPFEFSSITGHGIPQILECLHDKI 326 T Q S++TG GI ++ C+ + Sbjct: 312 PERTMAFQHIIPVSAVTGEGIEELKNCIRKSL 343 >gi|119595793|gb|EAW75387.1| GTP binding protein 5 (putative), isoform CRA_b [Homo sapiens] Length = 399 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 122/326 (37%), Positives = 179/326 (54%), Gaps = 17/326 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +V + G+GGAG F E EFGGPDGG GG Q +L++++ RYQ Sbjct: 72 FVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNVD----QQVKSLSSVLS-RYQ 126 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 GE G +N G G + + VPVGT V ++G ++ DL G I A GG Sbjct: 127 ----GFSGEDGGSKNCFGRSGAVLYIRVPVGTLV--KEGGRVVADLSCVGDEYIAALGGA 180 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++ N+AP PG GQ++++ L+LK +A G++G PNAGKS+ L +++ A Sbjct: 181 GGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNA 240 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +P +A YPFTTL P++GIV EG+ + +ADIPGII+ AHQ G+G FL+H ER LL Sbjct: 241 RPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLL 300 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V + + EL Y L + + ++ID ++ ++L G Sbjct: 301 FVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQA---NLSQLRDHLG 357 Query: 302 QVPFEFSSITGHGIPQILECLHDKIF 327 Q S++TG + Q+L LH K+ Sbjct: 358 QEVIVLSALTGENLEQLL--LHLKVL 381 >gi|307187768|gb|EFN72740.1| GTP-binding protein 5 [Camponotus floridanus] Length = 587 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 109/281 (38%), Positives = 173/281 (61%), Gaps = 4/281 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D + G GG G ISF R + GPDGG GG GG V +A ++ L + Q Sbjct: 252 FVDIKQTRTIGGKGGDGEISFLRLWVNDRAGPDGGDGGSGGHVIFEAKKDVKDLRNV--Q 309 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +A+ GEKG ++ G E V+ VP+GT V + + ++ DLDQ+G I A GG Sbjct: 310 SVIRAEDGEKGYTKDCFGKNAEHNVVKVPIGTIVRDLNN-KILADLDQDGMMFIAARGGA 368 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN+ FKS T Q+P + G +G++ L+++ +A +G+IGLPNAGKST L +++RA Sbjct: 369 GGHGNSFFKSDTQQSPEISEYGAIGEDLRYVLEIRSMAHVGLIGLPNAGKSTLLRAISRA 428 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PK+A YPFTTL P++G+++ + Y++ +AD+PG+I+++H+ G+G FLKH ER L+ Sbjct: 429 RPKVAAYPFTTLRPHIGMIQYDDYEQVAVADMPGLIEDSHKNKGLGVTFLKHAERCAALI 488 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 I+ + A + + E+S +N +L + +IV +++D Sbjct: 489 FILDITVDEPWKALEVLKYEISQFNEKLNDRPQIVVANKMD 529 >gi|207109577|ref|ZP_03243739.1| GTPase ObgE [Helicobacter pylori HPKX_438_CA4C1] Length = 176 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 87/171 (50%), Positives = 118/171 (69%), Gaps = 4/171 (2%) Query: 125 FGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKP 184 GNAHFKS+T Q P YA G+ G EK + L+LKLIADIG++G PNAGKST +++++ AKP Sbjct: 1 LGNAHFKSATKQQPTYAQKGLEGVEKCVRLELKLIADIGLVGFPNAGKSTLISTISNAKP 60 Query: 185 KIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHI 243 KIA+Y FTTL PNLG+V K EF++ADIPGII+ A QG G+G FLKH ERT VL + Sbjct: 61 KIANYEFTTLVPNLGVVSVDEKSEFLMADIPGIIEGASQGKGLGISFLKHIERTKVLAFV 120 Query: 244 VSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLAR 291 + A L+ ++ YQ + EL ++ L K V L++ D V++ D +A+ Sbjct: 121 LDASRLDLGIKEQYQRLRLELEKFSPALANKPFGVLLNKCDVVENIDKMAK 171 >gi|149636028|ref|XP_001505964.1| PREDICTED: similar to GTP binding protein 5 [Ornithorhynchus anatinus] Length = 430 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 114/285 (40%), Positives = 164/285 (57%), Gaps = 5/285 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +V + G GG G F E EFGGPDGG+GG GG V ++ S + +L Sbjct: 96 FVDHRRVCVTGGRGGNGITCFHSEPRKEFGGPDGGNGGDGGHVILKVDSEVKSLASV--L 153 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++ GE G RN G G+ + + VP+GT V E++ I + DL Q G+ + A GG Sbjct: 154 SMYRGFDGEAGGSRNSYGRNGDCLYIKVPLGTLVKEDNEI--VADLSQAGEEYVAAFGGL 211 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++ N+AP PG GQ ++++L+LK +A G++G PNAGKS+ L + +A Sbjct: 212 GGKGNRFFLANDNRAPMTCTPGQPGQARVLYLELKTMAHAGMVGFPNAGKSSLLRAKKKA 271 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP +A YPFTTL P++GIV E Y++ +ADIPGII+ AHQ G+G FL+H ER LL Sbjct: 272 KPAVASYPFTTLNPHVGIVHYEDYQQVAVADIPGIIRGAHQNRGLGFAFLRHIERCRFLL 331 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 +V + + EL Y+ L K+ + ++ID S Sbjct: 332 FVVDLSTSEPWTQLEDLKYELEKYDEGLSKRPHAIIGNKIDLPQS 376 >gi|326501518|dbj|BAK02548.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 514 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 120/375 (32%), Positives = 182/375 (48%), Gaps = 83/375 (22%) Query: 2 KFLDEAKVYIRSGDGGAGGI------------------------------------SFRR 25 K+ D A V +R+GDGG G + SF+R Sbjct: 83 KYFDHAVVSVRAGDGGHGAVLNMPPGTSADAAPARPRGGGRAADKGKAKRGSGKKVSFKR 142 Query: 26 EKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHG----EKGM--KRNRS 79 P GG GGDV + A TL+ F + A+ G G R + Sbjct: 143 NYDGSVSLP---VGGHGGDVVLYADEAEETLLGFHSKARLCAKRGGNVGATGTLSSRMHN 199 Query: 80 GAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGF----------GNAH 129 G GE + + VPVGT V + G S++ DL G +++A GG GG G A Sbjct: 200 GFAGETLRIPVPVGTVVRRKKG-SVLADLAHPGDEVLVARGGQGGISLIDAPDYKRGKAM 258 Query: 130 ------FKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAK 183 + T++ + PG +E + L L+++AD+G++GLPNAGKST L+++T A+ Sbjct: 259 ALSPNVMRDVTDKVLTHGQPG---EEISLELILRVVADVGLVGLPNAGKSTLLSAITLAR 315 Query: 184 PKIADYPFTTLYPNLGIV----KEGYKEF----ILADIPGIIKNAHQGAGIGDRFLKHTE 235 P IADYPFTTL PNLG + G +F LAD+PG+I+ AH G G+G FL+H Sbjct: 316 PDIADYPFTTLMPNLGRLGGDPTLGALQFSSGATLADLPGLIEGAHLGKGLGRNFLRHLR 375 Query: 236 RTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 RT V++H+V A ++ Y+ + +EL YN + ++ +V L++ID L + ++ Sbjct: 376 RTRVIVHVVDAAADDPVNDYKIVREELRMYNPKYLERPYVVVLNKID------LPKAQDR 429 Query: 296 LATQCGQVPFEFSSI 310 L++ + E SS+ Sbjct: 430 LSS----LALEISSV 440 >gi|222625975|gb|EEE60107.1| hypothetical protein OsJ_12974 [Oryza sativa Japonica Group] Length = 409 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 105/299 (35%), Positives = 161/299 (53%), Gaps = 38/299 (12%) Query: 39 GGRGGDVWIQATSNLNTLIDFRYQQHFKAQHG----EKGM--KRNRSGAKGEDVVLTVPV 92 GG GGDV + A TL+ F + + A+ G G R +G GE + + VPV Sbjct: 43 GGHGGDVVVYADEAEETLLRFHEKARYCAKRGGNVGATGTLSSRMHNGFAGETLRIPVPV 102 Query: 93 GTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGIL------ 146 GT V + G +++ DL G +I+A GG GG + +P I+ Sbjct: 103 GTVVKRKKG-AVLADLAHPGDEVIVARGGQGGISLIDVPEYRRRKAMVLSPNIMRDVSDR 161 Query: 147 -------GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG 199 G+E + L L+++AD+G++GLPNAGKST L+++T A+P IADYPFTTL PNLG Sbjct: 162 VLIHGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLSAITLARPDIADYPFTTLMPNLG 221 Query: 200 IVK--------EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENV 251 + + E LAD+PG+I+ AH G G+G FL+H RT V++H+V A ++ Sbjct: 222 RLGGDPALGALQFSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRVIVHVVDAAADDP 281 Query: 252 QAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSI 310 Y+ + +EL YN + ++ +V L++ID L + ++ L++ + FE SSI Sbjct: 282 VDDYKIVREELRMYNPQYLERPYVVVLNKID------LPKAQDRLSS----LAFEISSI 330 >gi|307210109|gb|EFN86806.1| GTP-binding protein 5 [Harpegnathos saltator] Length = 606 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 110/288 (38%), Positives = 175/288 (60%), Gaps = 6/288 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +V G GG G I+F R + GPDGG GG GG + +A+ ++ D + Sbjct: 272 FVDIKQVRTIGGKGGDGEITFLRLWVNDRAGPDGGDGGNGGHIIFEASMDVK---DLSHV 328 Query: 63 QHF-KAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 F +A GE+G ++ G E ++ VP+GT V + G ++CDL+Q G I A GG Sbjct: 329 HSFVQADDGERGYSKSCFGKNAEHKMVKVPIGTIVRDITG-KILCDLNQSGMMFIAARGG 387 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN FKS +Q+P G +G++ L++K +A IG+IGLPNAGKST L +++R Sbjct: 388 AGGHGNTFFKSDIHQSPEICEYGAVGEDIQYILEIKSMAHIGLIGLPNAGKSTLLQAISR 447 Query: 182 AKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPKIA YPFTTL P++G+V+ + Y++ +AD+PG+I+++H+ G+G FLKH ER L Sbjct: 448 AKPKIAPYPFTTLKPHIGMVQYDDYEQIAVADMPGLIEDSHKNKGLGITFLKHAERCTAL 507 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT 288 ++I+ + A + + E+S +N +L + +V +++D +++ Sbjct: 508 MYIIDVTLDEPWRALELLRYEISQFNEKLNDRPLLVVANKMDLPNAEV 555 >gi|255070805|ref|XP_002507484.1| obg family gtp-binding protein [Micromonas sp. RCC299] gi|226522759|gb|ACO68742.1| obg family gtp-binding protein [Micromonas sp. RCC299] Length = 523 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 166/334 (49%), Gaps = 54/334 (16%) Query: 3 FLDEAKVYIRSGDGGAGGI----------SFR------REKFIEFGGPDGGSGGRGGDVW 46 + DEA + + G GG G +F+ +KFIE + GGRGG+V+ Sbjct: 114 YFDEATITVSGGQGGDGEAWQTSKTKTVKNFKYKWGTNSQKFIELPAAEPADGGRGGNVY 173 Query: 47 IQATSNLNTLIDFRYQQHFKAQ---------HGEKGMKRNRSGAKGEDVVLTVPVGTQVF 97 I+ ++L+ ++ ++A+ H G +R R ED+ ++VP GT V Sbjct: 174 IRVDRACDSLLHIHKRKFWRAKKGYHGSSAPHSTPGRERPRLALTQEDLYISVPAGTVVR 233 Query: 98 EEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQ---------------APYYAN 142 + LI DL G I++A GG GG + ++ +P Sbjct: 234 RKRSGELIADLTSHGMAILVAEGGAGGIAARPSQQMYSRRQKKEKEVSDVGLEISPRVTT 293 Query: 143 PGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV- 201 G G+ + L ++++ADIGI+GLPNAGKS+ L ++TRA P IA YPFTTL PNLG++ Sbjct: 294 SGEPGEVVTLQLLMRVVADIGIVGLPNAGKSSILKAITRATPDIASYPFTTLMPNLGVIH 353 Query: 202 -------------KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 E ++AD+PG+IK AH+G G+G FL+H RT +L +V A Sbjct: 354 CERIVSEKLIDIDHETCALPVIADLPGLIKGAHKGRGLGRAFLRHLRRTRAMLIVVDASG 413 Query: 249 ENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 ++ + Y I +EL YN E + I+ L++ID Sbjct: 414 QDPVSDYTTIREELRLYNPEYILRPHILALNKID 447 >gi|332375482|gb|AEE62882.1| unknown [Dendroctonus ponderosae] Length = 376 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 111/281 (39%), Positives = 166/281 (59%), Gaps = 4/281 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +V G+GG G ISF EF GPDGG GG GG V + AT++ L Sbjct: 43 FIDTKQVRAVGGNGGDGCISFLSLWSNEFAGPDGGDGGHGGHVILHATTDAKDLCQLPTV 102 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +A G KG +N G + +V+ VPVGT + +G +I DL +EG I A GG Sbjct: 103 A--RAAEGGKGENKNCHGKNADHLVIEVPVGTVIKNING-KVIGDLSKEGLMFIAARGGA 159 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + T Q+P G +G+E ++++ +A +G+IG PNAGKS+ L +++RA Sbjct: 160 GGKGNQFFTTDTEQSPVICEFGAMGEEIEYLVEIRSMAHVGLIGFPNAGKSSLLRAMSRA 219 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PK+A YPFTTL P LGIV+ + Y++ +AD+PG+I ++H+ G+G +FLKHTER VLL Sbjct: 220 RPKVASYPFTTLKPYLGIVEYDDYEQIAIADLPGLIPDSHKNKGLGIQFLKHTERCMVLL 279 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 ++V A + + + EL ++ + I+ ++ID Sbjct: 280 YVVDASLDEPWTYVETLKHELLQFSESFSDRPHIIAANKID 320 >gi|326931913|ref|XP_003212068.1| PREDICTED: GTP-binding protein 5-like, partial [Meleagris gallopavo] Length = 381 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 98/240 (40%), Positives = 147/240 (61%), Gaps = 8/240 (3%) Query: 48 QATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICD 107 Q T +L++++ F ++ HGE+G +N GA G V + VP+GT V +EDG+ ++ D Sbjct: 95 QQTKSLSSVLPF-----YQGFHGERGGSKNCYGANGACVYVKVPIGTLV-KEDGV-VVAD 147 Query: 108 LDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGL 167 L Q G+ + A GG GG GN F S+ +AP + PG GQE+++ L+LK A G++G Sbjct: 148 LTQHGEEYVAAYGGAGGKGNRFFLSNEERAPTFFTPGEPGQERVLHLELKTTAHAGLVGF 207 Query: 168 PNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGI 226 PNAGKS+ L +++ AKP +A YPFTTL P++GIV+ E Y++ +ADIPG+I+ AHQ G+ Sbjct: 208 PNAGKSSLLRALSNAKPAVAAYPFTTLNPHVGIVRYEDYEQVAVADIPGLIRGAHQNRGL 267 Query: 227 GDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 G FL+H ER LL++V Q + EL Y L + +V ++ID +S Sbjct: 268 GMAFLRHIERCCFLLYVVDLSVSQPWIQLQDLKYELEQYKKGLSTRPCVVIGNKIDLAES 327 >gi|154816192|ref|NP_001094285.1| GTP-binding protein 10 [Rattus norvegicus] gi|149029048|gb|EDL84342.1| claudin 12 (predicted) [Rattus norvegicus] Length = 369 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 123/358 (34%), Positives = 187/358 (52%), Gaps = 63/358 (17%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSN--LNTLIDFR 60 F+D +++ + GG+GG+ + R G GGRGGDVW+ A N L L + Sbjct: 15 FIDNLRIFTK---GGSGGMGYPRLG---------GEGGRGGDVWVVAHKNMTLKQLKNKY 62 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ F A G G+KG+D + PVG V +E+G ++ +L++E RI++A G Sbjct: 63 PQKRFVAGGGANSRVSALKGSKGKDCEVPAPVGVSVTDENG-EVLGELNKEKDRILVAKG 121 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG K TN P + GQ++II L LK+IAD+G++G PNAGKS+ L+ V+ Sbjct: 122 GLGG------KLHTNFLP------LKGQKRIIHLDLKVIADVGLVGFPNAGKSSLLSRVS 169 Query: 181 RAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A P IA Y FTTL P LG I+ +K+ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 170 HATPVIASYAFTTLRPELGKIMYNDFKQISVADLPGLIEGAHMNKGMGHKFLKHLERTRQ 229 Query: 240 LLHIV--SALEENVQAAYQCILD-------ELSAYNSELRKKIEIVGLSQIDTVDSDTLA 290 LL +V S + + Y+ + EL Y EL+ K ++ ++++D D+ Sbjct: 230 LLFVVDISGFQLSSVTPYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQV-- 287 Query: 291 RKKNELATQCGQVPFEF----------------------SSITGHGIPQILECLHDKI 326 K +EL Q Q P +F S++TG GI ++ C+ + + Sbjct: 288 -KLHELMKQL-QKPEDFLHLFEAKMIPEKAIEFQHIIPISAVTGEGIEELKNCIRESL 343 >gi|307069650|ref|YP_003878127.1| putative Obg family GTPase CgtA [Candidatus Zinderia insecticola CARI] gi|306482910|gb|ADM89781.1| putative Obg family GTPase CgtA [Candidatus Zinderia insecticola CARI] Length = 333 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 108/276 (39%), Positives = 175/276 (63%), Gaps = 10/276 (3%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE K+ + G GG G ISF K P+GG+GG GG++WI+ +NTLI+F+ Sbjct: 1 MKFIDETKILLEGGKGGNGLISFNFIKNKSNLIPNGGNGGNGGNIWIKCNKKINTLINFK 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y+++FKAQ+G+ G N+ G G+++ L VP+GT++ + +L + ++++ G Sbjct: 61 YKKNFKAQNGKNGKNFNKKGKNGKNLFLEVPIGTKIKDIKNNIWYKELKKNNDKLLIVKG 120 Query: 121 GNGGFGNAHF-KSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 G GG GN +F K + + Y G +G++K I++K+ + ++IG++GLPN+GKSTFL+ Sbjct: 121 GLGGLGNKNFKKKNITYSDIYK--GKIGEKKYIYIKIIIFSEIGLLGLPNSGKSTFLSKN 178 Query: 180 TRAKPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 + +K KI +Y FTTLYP LGI K+F + DIPGIIKN+++ G+G +FLKH ++T Sbjct: 179 SNSKTKIDNYNFTTLYPELGITFLTKKKKFSITDIPGIIKNSYKNKGLGIKFLKHLKKTK 238 Query: 239 VLLHIVS-----ALEENVQAAYQCILDELSAYNSEL 269 ++L+I+ + N++ + IL L Y +L Sbjct: 239 LILYIIDITNFFIYKNNIKYILK-ILFNLKKYKMKL 273 >gi|170039923|ref|XP_001847767.1| Spo0B-associated GTP-binding protein [Culex quinquefasciatus] gi|167863509|gb|EDS26892.1| Spo0B-associated GTP-binding protein [Culex quinquefasciatus] Length = 319 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 110/267 (41%), Positives = 160/267 (59%), Gaps = 4/267 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V G GG G +SF R E GPDGG GG GG V +QA+ ++ L Q Sbjct: 48 FVDCKHVRTIGGKGGDGCVSFLRLWCNENAGPDGGDGGNGGHVVLQASGDVRDLNHVTVQ 107 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 A G+ G ++ G V+ VP+GT V +G ++ DLD+EG + A GG Sbjct: 108 --LNADAGDNGRNKDCHGKNAGHTVVKVPLGTIVKSGEG-KVVGDLDKEGTMFVAARGGA 164 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F S QAP A G G++K L+L+ +A +G IGLPNAGKST L +++RA Sbjct: 165 GGKGNHFFISDLEQAPQVAEFGAQGEDKSYILELRSMAHVGFIGLPNAGKSTLLRAISRA 224 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PK+A YPFTTL P+LG+V+ + Y++ +AD+PG+I ++H+ G+G +FLKH ER ++LL Sbjct: 225 RPKVAAYPFTTLKPHLGMVQYDDYEQIAVADLPGLIPDSHKNKGLGIQFLKHAERCNILL 284 Query: 242 HIVSALEENVQAAYQCILDELSAYNSE 268 +V A AY ++ EL+ ++ + Sbjct: 285 FVVDASAAEPWTAYHTLMHELTMFSED 311 >gi|72010073|ref|XP_786273.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115936437|ref|XP_001181855.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 390 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 161/289 (55%), Gaps = 33/289 (11%) Query: 44 DVWIQATSN--LNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDG 101 DV++QA + L + + +Q + A G+ R G KG D+++ VP G V +D Sbjct: 56 DVYVQALPDETLKNVKSSKREQRYIAGPGDNSKARILQGVKGRDLIIKVPPGVCV-TDDN 114 Query: 102 ISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIAD 161 L+ DL++ G ++++A GG GG + + G G K+I LKLIAD Sbjct: 115 NRLLGDLNKVGDKVLVARGGEGG---------KQKNEWSGTKGTKGSFKLI---LKLIAD 162 Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 +G +G PNAGKST L +V+R +PKIADYPFTT+ P +GIV+ + ++ +AD+PG+I+ + Sbjct: 163 VGFVGFPNAGKSTLLKAVSRTEPKIADYPFTTIRPQVGIVEYDDKRQISMADLPGLIEGS 222 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILD-------ELSAYNSELRK 271 HQ G+G RFL+H ERT +LL +V + + + AY+ + EL Y SEL + Sbjct: 223 HQNMGMGHRFLRHVERTKLLLFVVDVHGFQLSPRHAYRNAFETINILNKELELYKSELVE 282 Query: 272 KIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 K I+ L+++D +D L ++ E + ++ T H P ++E Sbjct: 283 KPAILALNKLDMEGADELLQETLE--------AIQNNTETSHSHPDMVE 323 >gi|134031950|ref|NP_001076798.1| GTP binding protein 5 [Mus musculus] gi|134031986|ref|NP_082698.1| GTP binding protein 5 [Mus musculus] gi|134032025|ref|NP_852089.2| GTP binding protein 5 [Mus musculus] gi|134032035|ref|NP_001076797.1| GTP binding protein 5 [Mus musculus] gi|123222478|emb|CAM28007.1| GTP binding protein 5 [Mus musculus] gi|148675361|gb|EDL07308.1| GTP binding protein 5, isoform CRA_a [Mus musculus] gi|148675365|gb|EDL07312.1| GTP binding protein 5, isoform CRA_a [Mus musculus] Length = 405 Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 123/326 (37%), Positives = 182/326 (55%), Gaps = 11/326 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +V +R G GG+G F E EFGGPDGG GG GG + ++ + +L Q Sbjct: 71 FVDHRRVLVRGGSGGSGMSCFHSEPRKEFGGPDGGDGGNGGHIILRVDQQVKSLSSVLSQ 130 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++ GE G +N SG G + + VPVGT V E D I + DL G + A GG Sbjct: 131 --YQGFSGEDGGSKNCSGRGGATLYIQVPVGTLVKEGDKI--VADLSNLGDEYVAALGGA 186 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++ N+AP PG GQE++++L+LK +A G++G PNAGKS+ L +++ A Sbjct: 187 GGKGNRFFLANDNRAPVTCTPGQPGQERVLYLELKTMAHAGMVGFPNAGKSSLLRAISNA 246 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP +A YPFTTL P++GIV EG+++ +ADIPGII+ AHQ G+G FL+H ER L Sbjct: 247 KPAVASYPFTTLNPHVGIVHYEGHQQVAVADIPGIIRGAHQNKGLGLSFLRHIERCRFFL 306 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +V + EL + L ++ ++ ++ID + + +L + G Sbjct: 307 FVVDLTLPEPWTQVDDLKYELEKFEEGLSERSHVIIANKIDLPQARA---RLPQLQARLG 363 Query: 302 QVPFEFSSITGHGIPQI---LECLHD 324 Q S++TG + Q+ L+ LHD Sbjct: 364 QEAIGLSALTGENLEQLLLHLKELHD 389 >gi|126341553|ref|XP_001378035.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 385 Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 118/322 (36%), Positives = 177/322 (54%), Gaps = 41/322 (12%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 F+D +++ + GGAGG+ + R G GG+GGDVWI A NL + D Sbjct: 15 FMDNLRLFTK---GGAGGMGYPRLG---------GEGGKGGDVWIVAKKRVNLKQIKDKY 62 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ F A G G KG D ++ PVG V +E G +I +L++E +I++A G Sbjct: 63 PQKRFVAGDGANSRISALKGEKGLDCEISAPVGIIVTDERG-QIIGELNKEDDKILIAQG 121 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG ++F S GQ++II L LKLIADIG++G PNAGKS+ L+ ++ Sbjct: 122 GLGGNLLSNFLPSK------------GQKRIIHLDLKLIADIGLVGFPNAGKSSLLSKIS 169 Query: 181 RAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKP IADY FTT+ P LG I+ K+ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 170 HAKPDIADYAFTTIRPQLGKIMYNDLKQVSVADLPGLIEGAHLNKGMGHKFLKHIERTKQ 229 Query: 240 LLHIVS------ALEENVQAAYQCIL---DELSAYNSELRKKIEIVGLSQIDTVDSDTLA 290 LL +V + + ++A++ ++ EL Y +L K ++ ++++D D+ Sbjct: 230 LLFVVDITGFQLSSKTKFRSAFETVILLTKELELYKEDLMMKPSLLAVNKMDLPDAKD-- 287 Query: 291 RKKNELATQCGQVPFEFSSITG 312 K +EL Q Q P +FS + G Sbjct: 288 -KFSELVKQL-QNPKDFSHLFG 307 >gi|83320123|ref|NP_694756.1| GTP-binding protein 10 [Mus musculus] gi|81878296|sp|Q8K013|GTPBA_MOUSE RecName: Full=GTP-binding protein 10 gi|21961479|gb|AAH34507.1| GTP-binding protein 10 (putative) [Mus musculus] gi|74137820|dbj|BAE24078.1| unnamed protein product [Mus musculus] gi|148682695|gb|EDL14642.1| cDNA sequence BC034507, isoform CRA_b [Mus musculus] Length = 366 Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 122/357 (34%), Positives = 186/357 (52%), Gaps = 61/357 (17%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSN--LNTLIDFR 60 F+D +++ + GG+GG+ + R G GGRGGDVW+ A N L L + Sbjct: 15 FIDNLRIFTK---GGSGGMGYPRLG---------GEGGRGGDVWVVAHKNMTLKQLKNKY 62 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ F A G G+KG+D + PVG V +E+G ++ +L++E R+++A G Sbjct: 63 PQKRFVAGGGANSRVSALQGSKGKDCEVPAPVGISVTDENG-QVLGELNKEEDRVLVAKG 121 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG K TN P + GQ++I+ L LK+IAD+G++G PNAGKS+ L+ V+ Sbjct: 122 GLGG------KLHTNFLP------LKGQKRIVHLDLKVIADVGLVGFPNAGKSSLLSRVS 169 Query: 181 RAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A P IADY FTTL P LG I+ +K+ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 170 HATPVIADYAFTTLRPELGKIMYNDFKQISVADLPGLIEGAHMNKGMGHKFLKHLERTRQ 229 Query: 240 LLHIV--SALEENVQAAYQCILD-------ELSAYNSELRKKIEIVGLSQIDTVDSDTLA 290 LL +V S + + Y+ + EL Y EL+ K ++ ++++D D+ Sbjct: 230 LLFVVDISGFQLSSVTPYRTAFETIILLTKELELYKEELQTKPALLAINKMDLPDAQV-- 287 Query: 291 RKKNELATQ------------CGQVP---FEF------SSITGHGIPQILECLHDKI 326 K EL Q +P EF S++TG GI ++ C+ + Sbjct: 288 -KLQELMKQLLSPEDFLHLFETKMIPEKALEFQHIVPISTVTGEGIAELKSCIRKAL 343 >gi|145628201|ref|ZP_01784002.1| GTPase ObgE [Haemophilus influenzae 22.1-21] gi|144979976|gb|EDJ89635.1| GTPase ObgE [Haemophilus influenzae 22.1-21] Length = 212 Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 96/196 (48%), Positives = 136/196 (69%), Gaps = 3/196 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE+ + I +GDGG G +SFRREKFI GGPDGG GG GGDV++QA NLNTLID+R Sbjct: 1 MKFIDESLIRIEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGDVYLQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + F A+ GE G + +G +G+D++L VPVGT+ + D + DL Q GQ++++A G Sbjct: 61 FNKRFAAERGENGRSSDCTGRRGKDIILPVPVGTRAIDNDTKETLGDLTQHGQKMLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G G GN FKSS N+AP G G+++ + L+L L+AD+G++GLPNAGKSTF + Sbjct: 121 GYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLLLELMLLADVGMLGLPNAGKSTFYSCRF 180 Query: 181 RAKPK---IADYPFTT 193 ++ K ++ Y F+T Sbjct: 181 SSQTKSCRLSIYYFST 196 >gi|66547462|ref|XP_396976.2| PREDICTED: GTP-binding protein 10 homolog [Apis mellifera] Length = 392 Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 102/301 (33%), Positives = 175/301 (58%), Gaps = 39/301 (12%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 + +D ++++ G GG+G S+ GG GG+V++ L TL + +Y Sbjct: 25 RLIDSLRIHVTGGTGGSGLPSYGG------------LGGSGGNVYLIPEKKL-TLKNVKY 71 Query: 62 Q---QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 + KA +G + K+ G G+D+ ++VP+G V++E+ I L +++ + ++++A Sbjct: 72 KLKNMKLKAGNGSESSKKGLIGISGKDLNISVPIGISVYDENRIKL-GEINSQDTKLMIA 130 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG Q Y G+ G+ + I L L+L+AD+G+IG PNAGKSTFL + Sbjct: 131 KGGMGG---------CEQTGYC---GLKGESRTIILDLQLLADVGLIGFPNAGKSTFLNA 178 Query: 179 VTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 +++AKPKIA+YPFTT+ P LGI+K + Y++ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 179 ISKAKPKIANYPFTTIKPQLGIIKYKDYRQISIADLPGLIEGAHINKGMGHKFLKHVERT 238 Query: 238 HVLLHIVS------ALEENVQAAYQCIL---DELSAYNSELRKKIEIVGLSQIDTVDSDT 288 +LL IV +++ ++ + IL E+ Y +L K ++ ++++DT +D Sbjct: 239 KLLLFIVDIQGCQISIKHKYRSCLETILLLNKEIELYKPDLLDKPAMIIINKMDTKRADE 298 Query: 289 L 289 + Sbjct: 299 I 299 >gi|297736891|emb|CBI26092.3| unnamed protein product [Vitis vinifera] Length = 397 Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 91/231 (39%), Positives = 139/231 (60%), Gaps = 2/231 (0%) Query: 104 LICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIG 163 ++ +L GQR +L PGG GG GNA FKS TN+ P A G G E + L+LKL+AD+G Sbjct: 42 VLLELLHPGQRAMLLPGGRGGRGNASFKSGTNKVPKIAENGEEGPEMWLELELKLVADVG 101 Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQ 222 I+G PNAGKST L+ ++ A+P IA+YPFTTL PNLG+V GY ++AD+PG+++ AH+ Sbjct: 102 IVGAPNAGKSTLLSVISAAQPTIANYPFTTLLPNLGVVSFGYDATMVVADLPGLLEGAHK 161 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 G G+G FL+HTER L+H+V + + + + EL ++ EL +K +V +++D Sbjct: 162 GFGLGHEFLRHTERCSSLVHVVDGSSQQPEYEFDAVRLELELFSPELAEKPYVVAYNKMD 221 Query: 283 TVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 ++ E G F S++ G G +++ C ++ R E+ Sbjct: 222 LPEAYERWPSFKERLQARGIGTFCMSAVKGEGTHEVV-CAAYELLRNRTES 271 Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust. Identities = 24/41 (58%), Positives = 33/41 (80%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGR 41 M+ D AK+Y+++GDGG G ++FRREK++ FGGP GG GGR Sbjct: 1 MRCFDRAKIYVKAGDGGNGVVAFRREKYVPFGGPSGGDGGR 41 >gi|219118313|ref|XP_002179934.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217408987|gb|EEC48920.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 400 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 102/256 (39%), Positives = 150/256 (58%), Gaps = 15/256 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +V + G GG G +S + + PDGG GG GG V++ A TL Sbjct: 92 RFVDRVRVQVSGGAGGKGSLSSEQMRRRHHLRPDGGHGGHGGQVFLVADPREQTL--SWT 149 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGIS---LICDLDQEGQRIILA 118 H +A+ G G + SG KGE++++ VP G + D + +I DLD+ G ++A Sbjct: 150 HPHAQAEKGTNGSSKECSGRKGENLIIRVPSGNEESLTDSVRRTVVIADLDEPGSYALVA 209 Query: 119 PGGNGGFGNAHFKSSTNQAP------YYANPGILGQEKIIWLKLKLIADIGIIGLPNAGK 172 GG GG G++++ S+ P A P G+ + L+LKLIADIG++G PNAGK Sbjct: 210 RGGQGGIGSSYYASAQGPTPDAKILIRKAKPEP-GEIAFLELELKLIADIGLVGFPNAGK 268 Query: 173 STFLASVTRAKPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRF 230 S+ L +++RA P+IA YPFTTL+P +G + ++GY+ ADIPG+I+ A +G G G F Sbjct: 269 SSLLHAMSRASPEIAPYPFTTLHPLIGCIEYQDGYR-IRAADIPGLIEGASEGRGCGHAF 327 Query: 231 LKHTERTHVLLHIVSA 246 L+H ERT LL+IV A Sbjct: 328 LRHIERTKALLYIVDA 343 >gi|126303096|ref|XP_001376950.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 406 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 116/285 (40%), Positives = 162/285 (56%), Gaps = 5/285 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +V++ G+GG G F E EFGGPDGG GG GG V ++ ++ +L Sbjct: 72 FVDRRRVFVTGGNGGNGISCFHSEPRKEFGGPDGGDGGDGGHVILKVDKHIRSLSSVLSV 131 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H GE G +N G G+ + + VP GT V EE+ I + DL Q G I A GG Sbjct: 132 YH--GFDGEPGGNKNCFGRNGDCLYIRVPPGTLVKEENEI--VADLAQPGDEYIAALGGA 187 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++ N+AP PG GQE+++ L+LK +A G++G PNAGKS+ L ++ A Sbjct: 188 GGKGNRFFLANDNRAPMTCTPGQQGQERVLHLELKTMAHAGMVGFPNAGKSSLLRVISNA 247 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP +A YPFTTL P++GIV EGY++ +ADIPG+IK AHQ G+G FL+H ER LL Sbjct: 248 KPAVASYPFTTLNPHVGIVHYEGYQQVAVADIPGLIKGAHQNRGLGFAFLRHIERCRFLL 307 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 +V + + EL Y L ++ + ++ID S Sbjct: 308 FVVDLSVAEPWTQLEDLKYELEKYEEGLSERPHAIIGNKIDLPQS 352 >gi|332024489|gb|EGI64687.1| GTP-binding protein 10-like protein [Acromyrmex echinatior] Length = 388 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 90/236 (38%), Positives = 146/236 (61%), Gaps = 23/236 (9%) Query: 67 AQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFG 126 A+ G R GA G+D ++VP G V+ ++G+ L+ DL++E +I++A GG GG Sbjct: 78 AECGHDSSARGIIGAPGQDKNISVPRGILVYNQNGV-LLGDLNEEDSKILIAKGGLGGTK 136 Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 + ++ G+ G+ ++I L LKLIADIG++G PNAGKSTFLA+V+ AKPKI Sbjct: 137 DTNY------------CGLKGESQVIKLDLKLIADIGLVGFPNAGKSTFLAAVSNAKPKI 184 Query: 187 ADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV- 244 A+YPFTT+ P LGI+ + +E +AD+PG+I+ AH G+G +FLKH ERT +L+ IV Sbjct: 185 ANYPFTTIRPRLGIMNYDDLREITIADLPGLIEGAHMNIGMGHKFLKHIERTKLLMFIVD 244 Query: 245 -SALEENVQAAYQCILD-------ELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 + + + Y+ L+ E+ Y +L K ++ ++++DT ++D + ++ Sbjct: 245 IQGFQLSPRHGYRSCLETIVLLNKEIELYKPDLLKMPAVLIINKMDTDNADNILKE 300 >gi|260361678|ref|ZP_05774705.1| GTPase CgtA [Vibrio parahaemolyticus K5030] gi|308115503|gb|EFO53043.1| GTPase CgtA [Vibrio parahaemolyticus K5030] Length = 295 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 94/228 (41%), Positives = 141/228 (61%), Gaps = 8/228 (3%) Query: 104 LICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIG 163 ++ ++ + G+++++A GG G GN FKSS N+AP G G+ + I L+L L+AD+G Sbjct: 9 IVAEVAEHGKKVMVAKGGWHGLGNTRFKSSVNRAPRQRTLGTKGEIREIRLELLLLADVG 68 Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQ 222 ++GLPNAGKSTF+ +V+ AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A Sbjct: 69 MLGLPNAGKSTFIRAVSAAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIEGAAD 128 Query: 223 GAGIGDRFLKHTERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEIVGL 278 GAG+G RFLKH ER VLLH++ + + VQ A I+DEL Y+ +L K + Sbjct: 129 GAGLGIRFLKHLERCRVLLHMIDIMPIDQSDPVQNAL-TIIDELEQYSEKLASKPRWLVF 187 Query: 279 SQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHD 324 +++D + + K E+ G F+ S+I G ++ L D Sbjct: 188 NKVDLMPEEEANEKIQEILDALGWEDEYFKISAINRSGTKELCYKLAD 235 >gi|50758753|ref|XP_417403.1| PREDICTED: hypothetical protein [Gallus gallus] Length = 387 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 98/240 (40%), Positives = 145/240 (60%), Gaps = 8/240 (3%) Query: 48 QATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICD 107 Q +L++++ F ++ HGE+G +N GA G V + VPVGT V +EDG+ ++ D Sbjct: 101 QQMKSLSSVLPF-----YQGFHGERGGSKNCYGANGACVYVKVPVGTLV-KEDGV-VVAD 153 Query: 108 LDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGL 167 L Q G+ + A GG GG GN F S+ +AP PG GQE+++ L+LK A G++G Sbjct: 154 LTQHGEEYVAAYGGAGGKGNRFFLSNEKRAPTLFTPGEPGQERVLHLELKTTAHAGLVGF 213 Query: 168 PNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGI 226 PNAGKS+ L +++ AKP +A YPFTTL P++GIV+ E Y++ +ADIPG+I+ AHQ G+ Sbjct: 214 PNAGKSSLLRALSNAKPAVAAYPFTTLNPHVGIVRYEDYEQVAVADIPGLIRGAHQNRGL 273 Query: 227 GDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 G FL+H ER LL++V Q + EL Y L + +V ++ID +S Sbjct: 274 GMAFLRHIERCCFLLYVVDLSVSQPWIQLQDLKYELEQYKKGLSTRPCVVIGNKIDLAES 333 >gi|307199041|gb|EFN79765.1| GTP-binding protein 10-like protein [Harpegnathos saltator] Length = 382 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 82/183 (44%), Positives = 118/183 (64%), Gaps = 14/183 (7%) Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + KA+HG R G G + VP G V+ E+G+ L+ +L+QEG ++++ GG Sbjct: 67 KRIKAEHGNDSKARGIIGTPGTSKNIEVPCGITVYSENGV-LLGELNQEGTKLLVVRGGM 125 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG F G+ G+ ++I L +KLIAD+G++G PNAGKSTFLA+V++A Sbjct: 126 GGCEETGF------------CGVKGESQVIKLDMKLIADVGLVGFPNAGKSTFLAAVSKA 173 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA YPFTT+ P LG++K E Y++ +AD+PG+I+ AH G+G +FLKH ERT +LL Sbjct: 174 KPKIASYPFTTIRPRLGLMKYEDYRQISVADLPGLIEGAHMDIGMGHKFLKHIERTKLLL 233 Query: 242 HIV 244 IV Sbjct: 234 FIV 236 >gi|325528027|gb|EGD05249.1| GTPase CgtA [Burkholderia sp. TJI49] Length = 185 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 97/185 (52%), Positives = 134/185 (72%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA++ + +GDGG G S RREKF+ FGGPDGG GGRGG V+ A N+NTLID+R Sbjct: 1 MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGSVYAIADRNINTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y + A++GE G + G G+D+ L +PVGT + + D LI DL + Q+++LA G Sbjct: 61 YAKKHLARNGENGRGSDCYGKGGDDITLRMPVGTIITDMDTGELIADLTEHDQQVMLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HFKSSTN+AP G G+ +++ L+LK++AD+G++G+PNAGKSTF++SV+ Sbjct: 121 GAGGLGNLHFKSSTNRAPRQKTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVS 180 Query: 181 RAKPK 185 AKPK Sbjct: 181 NAKPK 185 >gi|218462949|ref|ZP_03503040.1| GTPase ObgE [Rhizobium etli Kim 5] Length = 115 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 89/114 (78%), Positives = 96/114 (84%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKFLDEAKVYIRSGDGGAG +SFRREKFIEFGGPDGG GGRGGDVW++ + LNTLIDFR Sbjct: 1 MKFLDEAKVYIRSGDGGAGSVSFRREKFIEFGGPDGGDGGRGGDVWVETVNGLNTLIDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQR 114 YQQHFKA G GM RNR+GA G DV L VPVGTQ+FEED +LICDL EGQR Sbjct: 61 YQQHFKATIGTHGMGRNRTGANGSDVTLKVPVGTQIFEEDRETLICDLTVEGQR 114 >gi|189164141|gb|ACD77180.1| GTP-binding protein 10 (predicted) [Sorex araneus] Length = 389 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 98/256 (38%), Positives = 148/256 (57%), Gaps = 25/256 (9%) Query: 44 DVWIQATS--NLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDG 101 DVW+ A L L ++ F A G G+KG+D + VPVG V +E G Sbjct: 15 DVWVVAHEKMTLKQLKSKYPKKRFVAGEGANSRVSALKGSKGKDCEIPVPVGVSVTDEHG 74 Query: 102 ISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIAD 161 +I +L++E +RI++A GG GG K TN P + GQ+++I L LKL+AD Sbjct: 75 -KIIGELNKEKERILVAEGGLGG------KLLTNFLP------LKGQKRVIRLDLKLVAD 121 Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNA 220 IG++G PNAGKS+ L+ ++ AKP+IADY FTTL P LG I+ + +K+ +AD+PG+I+ A Sbjct: 122 IGLVGFPNAGKSSLLSQISHAKPEIADYAFTTLKPELGKIMYDDFKQVSVADLPGLIEGA 181 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVS------ALEENVQAAYQCIL---DELSAYNSELRK 271 H G+G +FLKH ERT LL +V + + A++ I+ EL Y EL+ Sbjct: 182 HMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSYTQYRTAFETIILLTKELELYKEELQT 241 Query: 272 KIEIVGLSQIDTVDSD 287 K ++ ++++D +D Sbjct: 242 KPALLAVNKMDLPHAD 257 >gi|149034047|gb|EDL88830.1| similar to GTP binding protein 5, isoform CRA_a [Rattus norvegicus] gi|149034048|gb|EDL88831.1| similar to GTP binding protein 5, isoform CRA_a [Rattus norvegicus] Length = 406 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 123/326 (37%), Positives = 180/326 (55%), Gaps = 10/326 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +V R G GG+G F E EFGGPDGG GG GG + ++ + +L Q Sbjct: 72 FVDHRRVLFRGGSGGSGMSCFHSEPRKEFGGPDGGDGGNGGHIILRVDQQVKSLSSVLSQ 131 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++ GE G +N G G + + VPVGT V E D I + DL G + A GG Sbjct: 132 --YQGFSGEDGGSKNCFGRGGATLYIQVPVGTLVKEGDEI--VADLSHLGDEYVAALGGA 187 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++ N+AP PG GQE++++L+LK +A G++G PNAGKS+ L +++ A Sbjct: 188 GGKGNRFFLANDNRAPVTCTPGQPGQERVLYLELKTMAHAGMVGFPNAGKSSLLRAISNA 247 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP +A YPFTTL P++GIV EG+++ +ADIPGII+ AHQ G+G FL+H ER L Sbjct: 248 KPAVASYPFTTLNPHVGIVHYEGHQQVAVADIPGIIRGAHQNKGLGLSFLRHIERCRFFL 307 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++V + EL Y L ++ ++ ++ID + +L + G Sbjct: 308 YVVDLSLPEPWTQVDDLKYELEKYEEGLSERSHVIIANKIDLPQARA---HLLQLQDRLG 364 Query: 302 QVPFEFSSITGHGIPQILECLHDKIF 327 Q S++TG + Q+L LH K+ Sbjct: 365 QEVIALSALTGENLEQLL--LHLKVL 388 >gi|225717452|gb|ACO14572.1| GTP-binding protein 10 homolog [Caligus clemensi] Length = 394 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 108/304 (35%), Positives = 165/304 (54%), Gaps = 45/304 (14%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 ++D +VY++ G GG G S G GG V I + + +L+ Y+ Sbjct: 16 WIDSLRVYVKGGHGGNGLPSIGGAG------------GPGGSVLISPSRKVKSLMKV-YK 62 Query: 63 QHFKAQHGEK-----GMKRNRS---GAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQR 114 +F + ++ G +RS G GED+ VP+G Q+F+ D L+ DLD E Sbjct: 63 DNFDGEQKQRLVASSGNHSSRSIILGQSGEDITFQVPLGIQIFD-DHQRLLKDLDSEEVL 121 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 + +A GGNGG +Q + PG Q + I L LK+IAD+G++G PNAGKST Sbjct: 122 VKVAAGGNGG---------CSQNGWIGQPG---QSRHIRLDLKIIADVGLVGFPNAGKST 169 Query: 175 FLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLK 232 L +++RAKPKIA YPFTT+ PNLG + + +LAD+PG+I+ A G+G RFLK Sbjct: 170 LLKAISRAKPKIASYPFTTIQPNLGEVLYSSDMRRIVLADLPGLIEGASYNVGMGHRFLK 229 Query: 233 HTERTHVLLHIVSA----LEE--NVQAAYQCIL---DELSAYNSELRKKIEIVGLSQIDT 283 H ERT +LL I+ L+E ++A++ ++ E+ YN +L +K + +++DT Sbjct: 230 HLERTRLLLFIIDVNGFKLKEGGTYRSAFETLVLLNKEIQLYNPDLLEKPCVCVFNKMDT 289 Query: 284 VDSD 287 S+ Sbjct: 290 EGSE 293 >gi|148682694|gb|EDL14641.1| cDNA sequence BC034507, isoform CRA_a [Mus musculus] Length = 380 Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 114/325 (35%), Positives = 175/325 (53%), Gaps = 38/325 (11%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSN--LNTLIDFR 60 F+D +++ + GG+GG+ + R G GGRGGDVW+ A N L L + Sbjct: 15 FIDNLRIFTK---GGSGGMGYPRLG---------GEGGRGGDVWVVAHKNMTLKQLKNKY 62 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ F A G G+KG+D + PVG V +E+G ++ +L++E R+++A G Sbjct: 63 PQKRFVAGGGANSRVSALQGSKGKDCEVPAPVGISVTDENG-QVLGELNKEEDRVLVAKG 121 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG K TN P + GQ++I+ L LK+IAD+G++G PNAGKS+ L+ V+ Sbjct: 122 GLGG------KLHTNFLP------LKGQKRIVHLDLKVIADVGLVGFPNAGKSSLLSRVS 169 Query: 181 RAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A P IADY FTTL P LG I+ +K+ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 170 HATPVIADYAFTTLRPELGKIMYNDFKQISVADLPGLIEGAHMNKGMGHKFLKHLERTRQ 229 Query: 240 LLHIV--SALEENVQAAYQCILD-------ELSAYNSELRKKIEIVGLSQIDTVDSDT-L 289 LL +V S + + Y+ + EL Y EL+ K ++ ++++D D+ L Sbjct: 230 LLFVVDISGFQLSSVTPYRTAFETIILLTKELELYKEELQTKPALLAINKMDLPDAQVKL 289 Query: 290 ARKKNELATQCGQVPFEFSSITGHG 314 +L + G+ F + G Sbjct: 290 QELMKQLLSPEGKAAVRFHLVRSAG 314 >gi|303274584|ref|XP_003056610.1| hypothetical protein MICPUCDRAFT_49494 [Micromonas pusilla CCMP1545] gi|226462694|gb|EEH59986.1| hypothetical protein MICPUCDRAFT_49494 [Micromonas pusilla CCMP1545] Length = 443 Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 107/351 (30%), Positives = 165/351 (47%), Gaps = 74/351 (21%) Query: 2 KFLDEAKVYIRSGDGGAGGISF----------------RREKFIEFGGPDGGSGGRGGDV 45 KF DEA + ++ G GG G +K+IE + GG+GGDV Sbjct: 42 KFFDEATILVKGGQGGDGEAWLGAKAKTVKNFKYKWGRNMKKYIELPAAEPADGGKGGDV 101 Query: 46 WIQATSNLNTLIDFRYQQHFKAQ---------HGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 +I+ + ++L+ F F+A+ H G R R +D+ + VP GT V Sbjct: 102 FIRVDRHCDSLLGFHENNVFQAKKGYHGSAAAHANPGRGRLRIAPPQDDIFIDVPPGTVV 161 Query: 97 FEEDGISLICDLDQEGQRIILA----------------------------PGGNGGFGNA 128 + L+ DL + GQ +++A G + FG Sbjct: 162 RLKRSGELLGDLTKHGQTLLVAEGGAGGTAARRTRPQNRKGDQKVTRSKISGNDPDFGEI 221 Query: 129 HFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIAD 188 + T + G G+E + L ++++ADIG++GLPNAGKS+ L ++TRA P++A Sbjct: 222 ELDTET----WIPIEGKKGEELTLELLMRVVADIGLVGLPNAGKSSILRALTRATPEVAP 277 Query: 189 YPFTTLYPNLGIV---------KEGYKEF--------ILADIPGIIKNAHQGAGIGDRFL 231 YPFTTL PNLG+V Y + +LAD+PG+I AH+G G+G FL Sbjct: 278 YPFTTLMPNLGVVIPTDGSVLTPRAYSKTCEANTAPPVLADLPGLIAGAHKGRGLGRAFL 337 Query: 232 KHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 +H RT L+ +V A ++ Y I +EL YN E K+ I+ L+++D Sbjct: 338 RHLRRTRGLVVVVDASGKDPVGDYAIIRNELLMYNPEYTKRKHILVLNKMD 388 >gi|296209747|ref|XP_002751691.1| PREDICTED: GTP-binding protein 10-like [Callithrix jacchus] Length = 327 Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 101/271 (37%), Positives = 153/271 (56%), Gaps = 41/271 (15%) Query: 80 GAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPY 139 G+KG+D + VPVG + +E+G +I +L++E RI++A GG GG K TN P Sbjct: 21 GSKGKDCEIPVPVGISITDENG-KIIGELNKEDDRILVAEGGLGG------KFLTNFLP- 72 Query: 140 YANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG 199 + GQ+++I L LKLIAD+G++G PNAGKS+ L+ V+ AKP IADY FTTL P LG Sbjct: 73 -----LKGQKRVIHLDLKLIADVGLVGFPNAGKSSLLSRVSHAKPAIADYAFTTLKPELG 127 Query: 200 -IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS------ALEENVQ 252 I+ +K+ +AD+PG+I+ AH G+G +FLKH ERT LL +V + + Sbjct: 128 KIMYNDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSYHTQYR 187 Query: 253 AAYQCIL---DELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNEL-----------A 297 A++ I+ EL Y EL+ K ++ ++++D D+ D L N+L Sbjct: 188 TAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQDKLHELMNQLQNPKDFLHLFGK 247 Query: 298 TQCGQVPFEF------SSITGHGIPQILECL 322 + EF S++TG GI ++ C+ Sbjct: 248 NMIPERTVEFQHIIPISAVTGEGIEELKNCI 278 >gi|223718858|gb|ACN22216.1| GTP-binding protein 10 (predicted) [Dasypus novemcinctus] Length = 382 Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 109/295 (36%), Positives = 166/295 (56%), Gaps = 40/295 (13%) Query: 36 GGSGGRG-----------GDVWIQATS--NLNTLIDFRYQQHFKAQHGEKGMKRNRSGAK 82 GGSGG G GDVW+ A L L D ++ F A G G+K Sbjct: 25 GGSGGMGYPRLGGEGGRGGDVWVIADKKMTLKQLKDKYPKKRFVAGGGANSRVSALKGSK 84 Query: 83 GEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYAN 142 G+D + VPVG + +E+ +I +L++E +RI++A GG GG TN P Sbjct: 85 GKDYEIPVPVGITITDEND-KIIGELNKEKERILVAEGGLGG------TLLTNFLP---- 133 Query: 143 PGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IV 201 + GQ+++I L LKLIAD+G++G PNAGKS+ L+ V+ AKP IADY FTTL P LG I+ Sbjct: 134 --LKGQKRVIHLDLKLIADVGLVGFPNAGKSSLLSQVSHAKPLIADYAFTTLKPELGKIM 191 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS------ALEENVQAAY 255 + +K+ +AD+PG+I+ AH G+G +FLKH ERT LL +V + + + ++A+ Sbjct: 192 YQDFKQISVADLPGLIEGAHLNQGMGHKFLKHIERTRQLLFVVDVSGFQLSSQTHYRSAF 251 Query: 256 QCIL---DELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF 307 + I+ EL Y EL+ K ++ ++++D ++ + +EL Q Q P +F Sbjct: 252 ETIILLTKELELYKEELQTKPALLAVNKMDLPNAQD---RFHELMNQL-QNPKDF 302 >gi|320167012|gb|EFW43911.1| small GTP-binding protein [Capsaspora owczarzaki ATCC 30864] Length = 643 Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 111/314 (35%), Positives = 167/314 (53%), Gaps = 47/314 (14%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D + + G GG G ISF R + GGPDGG+GG GG+V A+ ++L Sbjct: 116 FIDFTRSEVTGGHGGDGAISFLRTITTDEGGPDGGNGGGGGNVVFMASDKYSSLAHV--P 173 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV-------------------FEEDG-- 101 + + G G R GA G+D+++ VP GT + FE Sbjct: 174 RKIAGRAGGNGQGDQRFGATGDDLIVHVPPGTVISVETQPFASLPAQLAAAAKFESQATR 233 Query: 102 -------------ISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQ 148 + ++ DL G + + A GG GGFGN HF++ T QAP A G G Sbjct: 234 VAAGSARSTLSANLRVLADLANFGDKYVAAVGGLGGFGNRHFRTPTEQAPEIATSGTAGS 293 Query: 149 EKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKE 207 ++ L+LK IAD+G++G PNAGKSTFL +V+ A P++A YPFTTL P +G+V + + Sbjct: 294 SALVVLELKTIADVGLVGWPNAGKSTFLGAVSNAHPEVAPYPFTTLNPFVGVVDFDDHHR 353 Query: 208 FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS 267 +ADIPG+++ AH G+G FL+H ER+ VLL+I+ ++ + Q ++ Sbjct: 354 MTVADIPGLVEGAHANRGLGHSFLRHVERSKVLLYIIDTAAQDGRDPLQDLI-------- 405 Query: 268 ELRKKIEI--VGLS 279 L++++E+ VGLS Sbjct: 406 ALQRELELFRVGLS 419 >gi|270641585|ref|ZP_06222127.1| GTP-binding protein, GTP1/Obg family [Haemophilus influenzae HK1212] gi|270317339|gb|EFA28878.1| GTP-binding protein, GTP1/Obg family [Haemophilus influenzae HK1212] Length = 160 Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 77/160 (48%), Positives = 112/160 (70%), Gaps = 1/160 (0%) Query: 57 IDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRII 116 ID+R+ + F A+ GE G + +G +G+D++L VPVGT+ + D + DL Q GQ+++ Sbjct: 1 IDYRFNKRFAAERGENGRSSDCTGRRGKDIILPVPVGTRAIDNDTKETLGDLTQHGQKML 60 Query: 117 LAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFL 176 +A GG G GN FKSS N+AP G G+++ + L+L L+AD+G++G PNAGKSTF+ Sbjct: 61 VAKGGYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLLLELMLLADVGMLGFPNAGKSTFI 120 Query: 177 ASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPG 215 V+ AKPK+ADYPFTTL P+LG+VK + F++ADIPG Sbjct: 121 RVVSAAKPKVADYPFTTLVPSLGVVKVDDSHSFVVADIPG 160 >gi|148675363|gb|EDL07310.1| GTP binding protein 5, isoform CRA_c [Mus musculus] Length = 290 Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 99/259 (38%), Positives = 147/259 (56%), Gaps = 9/259 (3%) Query: 70 GEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAH 129 GE G +N SG G + + VPVGT V E D I + DL G + A GG GG GN Sbjct: 21 GEDGGSKNCSGRGGATLYIQVPVGTLVKEGDKI--VADLSNLGDEYVAALGGAGGKGNRF 78 Query: 130 FKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADY 189 F ++ N+AP PG GQE++++L+LK +A G++G PNAGKS+ L +++ AKP +A Y Sbjct: 79 FLANDNRAPVTCTPGQPGQERVLYLELKTMAHAGMVGFPNAGKSSLLRAISNAKPAVASY 138 Query: 190 PFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 PFTTL P++GIV EG+++ +ADIPGII+ AHQ G+G FL+H ER L +V Sbjct: 139 PFTTLNPHVGIVHYEGHQQVAVADIPGIIRGAHQNKGLGLSFLRHIERCRFFLFVVDLTL 198 Query: 249 ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFS 308 + EL + L ++ ++ ++ID + + +L + GQ S Sbjct: 199 PEPWTQVDDLKYELEKFEEGLSERSHVIIANKIDLPQARA---RLPQLQARLGQEAIGLS 255 Query: 309 SITGHGIPQI---LECLHD 324 ++TG + Q+ L+ LHD Sbjct: 256 ALTGENLEQLLLHLKELHD 274 >gi|224533095|ref|ZP_03673696.1| GTPase ObgE [Borrelia burgdorferi WI91-23] gi|224511975|gb|EEF82375.1| GTPase ObgE [Borrelia burgdorferi WI91-23] Length = 223 Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 74/175 (42%), Positives = 113/175 (64%) Query: 108 LDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGL 167 L ++ GG GG GN +FK+S + P +A PG G + L+L L+ADIG++GL Sbjct: 4 LKNLNDEFVVLKGGRGGLGNWNFKTSVRRVPRFAQPGESGNSLSVRLELFLVADIGLVGL 63 Query: 168 PNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIG 227 PNAGKS+ L +T AK ++A+YPFTT P+LG+++ Y + I+ADIPGIIK A G G+G Sbjct: 64 PNAGKSSLLNRITSAKSRVANYPFTTKIPHLGMLRRSYDDLIIADIPGIIKGASFGVGLG 123 Query: 228 DRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 +FLKH +T +L ++ E N +Y +L+EL +Y+ +L K +I+ +++D Sbjct: 124 TKFLKHIAKTKILALVIDISEANFLESYNILLNELKSYSHKLFNKKKIIIANKLD 178 >gi|222637651|gb|EEE67783.1| hypothetical protein OsJ_25512 [Oryza sativa Japonica Group] Length = 666 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 87/208 (41%), Positives = 128/208 (61%), Gaps = 1/208 (0%) Query: 113 QRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGK 172 +R +L PGG GG GNA FKS TN+AP A G G E I L+LKL+AD+GI+G PNAGK Sbjct: 320 ERALLLPGGRGGRGNAAFKSGTNKAPRIAEKGEKGPEMWIDLELKLVADVGIVGAPNAGK 379 Query: 173 STFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNAHQGAGIGDRFL 231 ST L +++ AKP IA+YPFTTL PNLG+V + ++AD+PG+++ AH+G G+G FL Sbjct: 380 STLLTAISAAKPTIANYPFTTLLPNLGVVSLDFDATMVVADLPGLLEGAHRGYGLGHEFL 439 Query: 232 KHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 +H+ER VL+H+V E + ++ + EL ++ L K IV +++D ++ Sbjct: 440 RHSERCSVLVHVVDGSGEQPEYEFEAVRLELELFSPSLVDKPYIVVYNKMDLPEASERWN 499 Query: 292 KKNELATQCGQVPFEFSSITGHGIPQIL 319 K E G P+ S++ G ++ Sbjct: 500 KFQEKLQAEGIEPYCISAMNRQGTEDVV 527 >gi|327274498|ref|XP_003222014.1| PREDICTED: GTP-binding protein 10-like [Anolis carolinensis] Length = 367 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 113/352 (32%), Positives = 181/352 (51%), Gaps = 55/352 (15%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDF 59 +F+D+ ++Y++ GG GG+ + R G GG+GGDVW+ A L + D Sbjct: 14 RFMDDLRIYVK---GGTGGMGYPRLG---------GEGGKGGDVWLVANEKITLKRIKDR 61 Query: 60 RYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAP 119 + F A+ G GA G+D + VP+G V +DG ++ +L++ G+R+++A Sbjct: 62 YPNKRFIAEAGANSSIAALKGASGKDSEVNVPLGISVTTDDG-NIFGELNKPGERLLVAR 120 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG +F S GQ +I L LKLIAD+G++G PNAGKS+ L + Sbjct: 121 GGIGGCLVTNFFPSK------------GQAHMIHLDLKLIADVGLVGFPNAGKSSLLTKI 168 Query: 180 TRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 + A P+IA YPFTT+ P LG VK +K+ +AD+PG+I+ AH G G +FLKH ERT Sbjct: 169 SHATPEIAAYPFTTIKPELGTVKYPDHKQITVADLPGLIEGAHVNKGRGHKFLKHVERTK 228 Query: 239 VLLHIVS------ALEENVQAAYQCIL---DELSAYNSELRKKIEIVGLSQIDTVDS--- 286 LL +V + + A++ ++ EL Y EL K ++ ++++D ++ Sbjct: 229 QLLFVVDVSGFRLSPSAPFRTAFETVMLLSKELELYKEELCTKPALLAVNKMDLPNAKEN 288 Query: 287 -DTLARKKNELATQCGQVPFEF--------------SSITGHGIPQILECLH 323 D L + + +P S+I+G G+ +++ECL Sbjct: 289 LDELMEQLQKPEDYMHLLPVNMIPELTVKFRDIIPISAISGEGMEELIECLR 340 >gi|91084027|ref|XP_966382.1| PREDICTED: similar to Putative GTP-binding protein 5 [Tribolium castaneum] gi|270008002|gb|EFA04450.1| hypothetical protein TcasGA2_TC014754 [Tribolium castaneum] Length = 368 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 121/320 (37%), Positives = 180/320 (56%), Gaps = 9/320 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D + G GG G ISF EF GPDGG GG GG V +A S LI+ Sbjct: 42 FIDLKTLRATGGCGGNGCISFLSLWSNEFAGPDGGDGGNGGHVIFKANSATKDLINV--P 99 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +A+ GEKG ++ +G ++ VPVGT V +G+ ++ DL EG + A GG Sbjct: 100 PIIRAEDGEKGQNKDCNGKNAPHCIVDVPVGTVVKNANGV-VVGDLSSEGIMFVAARGGA 158 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + T QAP G G++ L++K +A +G+IG PNAGKST L++V+RA Sbjct: 159 GGKGNHFFVTDTEQAPKICEYGAEGEDLEYTLEIKSMAHVGLIGFPNAGKSTLLSAVSRA 218 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +PKIA YPFTTL P++G+V+ + Y++ +AD+PG+I +H+ G+G +FLKH ER LL Sbjct: 219 RPKIAPYPFTTLKPHIGMVQYDDYEQIAVADLPGLIPESHKNRGLGIQFLKHAERCTALL 278 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +I+ + + ELS ++ L ++ ++V ++ID + A K EL Q Sbjct: 279 YIIDLSLDKPWQYLHTLQYELSQFSKHLLERPQLVIANKIDLPE----AEKNLELLKQET 334 Query: 302 QVP-FEFSSITGHGIPQILE 320 + S+ G I Q+L+ Sbjct: 335 DLKVIPVSAKLGTNITQLLQ 354 >gi|332373810|gb|AEE62046.1| unknown [Dendroctonus ponderosae] Length = 384 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 104/298 (34%), Positives = 163/298 (54%), Gaps = 37/298 (12%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 F D +V++ G GG G F GG+GGDV ++AT +L T+ Sbjct: 24 FRDSLRVFVSGGPGGNGLPKFGG------------VGGKGGDVIVEATEGISLETVYKAN 71 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + + AQ G+ G GEDVV VPVG ++ E G L +L+++G+++++A G Sbjct: 72 ISKRYAAQKGKHASHNFILGPPGEDVVFKVPVGVRLVTELGKKL-GELNEDGEKLVIAKG 130 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG F G GQ + + LKLIAD+G++G PNAGKST L +++ Sbjct: 131 GTGGHAKNGFL------------GTRGQAYPVKMDLKLIADVGLVGFPNAGKSTLLKAIS 178 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A+P+IA YPFTT+ P LG++ E +++ +AD+PG+I+ A+ G+G FLKH ERT + Sbjct: 179 EARPRIASYPFTTVRPILGVISYEDHRQVSIADLPGLIEGAYSNRGMGHEFLKHIERTKL 238 Query: 240 LLHI--VSALEENVQAAYQCILD-------ELSAYNSELRKKIEIVGLSQIDTVDSDT 288 LL I V+ + + Q ++ L+ EL YN +L K I+ ++++D+ S+ Sbjct: 239 LLMIVDVNGFQLSPQYPHRSCLETIMLLNKELELYNEDLLNKHAILLINKMDSEGSEA 296 >gi|213419141|ref|ZP_03352207.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 177 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 88/176 (50%), Positives = 128/176 (72%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFL 176 G G GN FKSS N+ P G G ++ + L+L L+AD+G++G+PNAGKSTF+ Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRDLLLELMLLADVGMLGMPNAGKSTFI 176 >gi|62078577|ref|NP_001013946.1| GTP-binding protein 5 [Rattus norvegicus] gi|53734242|gb|AAH83707.1| GTP binding protein 5 [Rattus norvegicus] Length = 406 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 122/326 (37%), Positives = 179/326 (54%), Gaps = 10/326 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +V R G GG+G F E EFGGPDGG GG GG + ++ + +L Q Sbjct: 72 FVDHRRVLFRGGSGGSGMSCFHSEPRKEFGGPDGGDGGNGGHIILRVDQQVKSLSSVLSQ 131 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++ GE G +N G G + + VPVGT V E D I + DL G + A GG Sbjct: 132 --YQGFSGEDGGSKNCFGRGGATLYIQVPVGTLVKEGDEI--VADLSHLGDEYVAALGGA 187 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F ++ N+AP PG GQE++++L+LK +A G++G PNAGKS+ L +++ A Sbjct: 188 GGKGNRFFLANDNRAPVTCTPGQPGQERVLYLELKTMAHAGMVGFPNAGKSSLLRAISNA 247 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP +A YPFTTL P++GIV EG+++ +ADIPGII+ AHQ G+G FL+H ER L Sbjct: 248 KPAVASYPFTTLNPHVGIVHYEGHQQVAVADIPGIIRGAHQNKGLGLSFLRHIERCRFFL 307 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++V + EL Y ++ ++ ++ID + +L + G Sbjct: 308 YVVDLSLPEPWTQVDDLKYELEKYEEGPSERSHVIIANKIDLPQARA---HLLQLQDRLG 364 Query: 302 QVPFEFSSITGHGIPQILECLHDKIF 327 Q S++TG + Q+L LH K+ Sbjct: 365 QEVIALSALTGENLEQLL--LHLKVL 388 >gi|145349154|ref|XP_001419005.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579235|gb|ABO97298.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 293 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 93/292 (31%), Positives = 154/292 (52%), Gaps = 35/292 (11%) Query: 26 EKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKA---------QHGEKGMKR 76 +K+IE + GGRGG+V+++ ++L+ ++ ++A +H G +R Sbjct: 1 KKYIELPAAEPADGGRGGNVYLRVDRTCDSLLHLHERKTWRAKKGYHGSAAEHASGGRER 60 Query: 77 NRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQ 136 +R E + + VP GT V + L+ D+ + GQ +++A GG GG + N+ Sbjct: 61 HRVAPDQEHMYIPVPPGTVVRRKRTGELLGDMTKHGQTLLVAEGGGGGLAARRQQRQVNR 120 Query: 137 -------------------APYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 A + G G+E I L ++++AD G++GLPN GKS+ L Sbjct: 121 KMRNGKEEDFEASDIAIDTASLVSTVGEDGEELSIELLMRVVADCGLVGLPNVGKSSLLK 180 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVK-------EGYKEFILADIPGIIKNAHQGAGIGDRF 230 +VTRA P+IA+Y FTTL PNLG++K G ++AD+PG+I+ AH+G G+G F Sbjct: 181 AVTRASPEIANYAFTTLMPNLGVIKTEDDLAPTGESSTVMADLPGLIEGAHKGLGLGRAF 240 Query: 231 LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 L+H RT ++ +V A ++ + Y + EL YN E K+ I+ L++ D Sbjct: 241 LRHLRRTRSMVCVVDASGQDPVSDYVVVRQELKLYNPEYVKRPHILVLNKTD 292 >gi|296424719|ref|XP_002841894.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638145|emb|CAZ86085.1| unnamed protein product [Tuber melanosporum] Length = 533 Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 100/287 (34%), Positives = 154/287 (53%), Gaps = 24/287 (8%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D ++ + +G GG G +SF REKFI +G +GG+GG GG +++QA +L + Sbjct: 97 FADMQELTLIAGSGGNGCVSFLREKFIPYGPANGGNGGSGGSIFVQAVYGETSLHKLSRE 156 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISL--------ICDLDQEG-Q 113 +A+ G G + +G +G+DV++ VPVGT L DL + + Sbjct: 157 GTIRAKPGRNGKGSSINGKRGDDVIIRVPVGTTHHLSASTMLEITHPRNVYLDLSKPTME 216 Query: 114 RIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKS 173 I+L PG GG GN +F + + P +A G G I L+LK++ADIG++GLPNAGKS Sbjct: 217 PILLVPGAPGGLGNPNFVTDGRRRPMFATKGGKGIRMKIQLELKMLADIGLVGLPNAGKS 276 Query: 174 TFLASVTRAKPKIADYPFTTLYPNLGIV---------------KEGYKEFILADIPGIIK 218 +FL +V+ K ++ ++ FTTL PN+G V ++ F +ADIPG+I Sbjct: 277 SFLRAVSGRKARVGEWAFTTLAPNIGTVVMEERHLPPPRPGETQKRLPRFTIADIPGLIA 336 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 +AH G+G FL+H ER L ++ E+ + + E+ AY Sbjct: 337 DAHLNRGLGHGFLRHIERAKALCFVIDLSREDPVEDLKGLWREIKAY 383 >gi|33519572|ref|NP_878404.1| GTP-binding protein [Candidatus Blochmannia floridanus] gi|33517235|emb|CAD83618.1| probable GTP-binding protein [Candidatus Blochmannia floridanus] Length = 305 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 99/261 (37%), Positives = 145/261 (55%), Gaps = 16/261 (6%) Query: 48 QATSNLNTLIDFRYQQH-FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLIC 106 A LNTL F + H F+A++G+ G + +G +G+DVV+ VP+GT++F L+ Sbjct: 1 MADPKLNTLSHFNHNNHVFRAENGKSGGSGSCTGRRGKDVVIQVPLGTKIFCSKTHKLLG 60 Query: 107 DLDQEGQRIILAPGG--------NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKL 158 D+ Q ++ G N G +G+ K + L+L L Sbjct: 61 DMIQYRNIPLMVARGGRRGLGIRNNRVKKNIIHKKNKDVIQNRIQGEVGECKNLLLELNL 120 Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKE---FILADIP 214 IAD+GI+GLPN+GKS+F+ +++A PK+ADYPFTTL P LG VK +GY + FI+ADIP Sbjct: 121 IADVGIVGLPNSGKSSFVRIISKATPKVADYPFTTLVPQLGSVKVDGYADNNRFIIADIP 180 Query: 215 GIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---ELSAYNSELRK 271 GIIK A G G+G RFLKH R +LLH V + + I+D ELS Y+++L Sbjct: 181 GIIKGASSGCGLGLRFLKHLTRCRMLLHFVDINSVDDSDPVKNIIDIEQELSNYDAQLIN 240 Query: 272 KIEIVGLSQIDTVDSDTLARK 292 K + ++ID + L +K Sbjct: 241 KPRWLVFNKIDLLTQSELFKK 261 >gi|308505974|ref|XP_003115170.1| hypothetical protein CRE_28278 [Caenorhabditis remanei] gi|308259352|gb|EFP03305.1| hypothetical protein CRE_28278 [Caenorhabditis remanei] Length = 361 Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 118/328 (35%), Positives = 188/328 (57%), Gaps = 13/328 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQA---TSNLNTLIDF 59 F+D +V +G+GG G +SF R FGGPDGG GG GG V +A +L+T+ Sbjct: 35 FVDYRRVRCIAGNGGNGMVSFFRGYKKPFGGPDGGDGGHGGHVVFRARRGAKDLSTVYSI 94 Query: 60 RYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAP 119 +A +GE G ++ G E + VP+GT VF+ DG + + +L+QE I A Sbjct: 95 -----VRAHNGEFGRSKSCHGKSAEHKEINVPLGT-VFKSDGTT-VFELNQENDMFIAAR 147 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG GN + S+ + P+ A G G+E I ++++++A G++G PNAGKS+ L ++ Sbjct: 148 GGVGGRGNQFYVSNEVRKPFKAEYGGQGEELIYDVEMRVMATAGLVGFPNAGKSSLLRAI 207 Query: 180 TRAKPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 +RAKPK+A YPFTTL P++G+V E +++ +ADIPG+I++AH G+G FLKH ER Sbjct: 208 SRAKPKVASYPFTTLRPHIGVVFYEDFEQIAVADIPGLIEDAHLNKGLGISFLKHIERCQ 267 Query: 239 VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 L +++ N+ Y+ + EL Y L + + +++ID D D+ + L++ Sbjct: 268 SLWYVLDYSAGNLTEQYKLLRIELEGYQKGLGDRASTIVINKIDLSDKDS-EEENQHLSS 326 Query: 299 QCGQVP-FEFSSITGHGIPQILECLHDK 325 +P F S+ G+ +LE L ++ Sbjct: 327 LFPNLPVFPVSAQERIGLEPLLEHLREQ 354 >gi|322490887|emb|CBZ26151.1| putative GTP-binding protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 487 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 101/254 (39%), Positives = 152/254 (59%), Gaps = 6/254 (2%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQAT---SNLNTLID 58 +F+D KV + SG GG G E EF GP GG+GG GG+V +Q ++L+ ++D Sbjct: 14 RFVDRVKVLLCSGSGGDGASIMAHEHGNEFAGPGGGNGGNGGNVLLQCVKQHTDLSHIVD 73 Query: 59 FRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 Q A G G R G +G+D+ L +P+GTQV + D + D+D+EG +I+L Sbjct: 74 LGSQ--ISAGAGCCGFSREAHGKRGQDLWLQLPLGTQVVDMDTNEVQYDMDEEGMQIVLL 131 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GNA F + + +P + G+ G + ++LK IAD G+IG PNAGKS+ L++ Sbjct: 132 EGGQGGKGNAAFANKWHHSPIESTKGLPGNTMLAQIELKTIADCGLIGYPNAGKSSLLSA 191 Query: 179 VTRAKPKIADYPFTTLYPNLGIVKEGYKEFI-LADIPGIIKNAHQGAGIGDRFLKHTERT 237 ++ +KP IA Y FTTL P +G++ + Y +ADIPG+I+ A++ G+G +FL+H ERT Sbjct: 192 ISASKPTIAPYAFTTLRPYVGVLHDLYGNVCRVADIPGLIEGAYENRGLGHQFLRHVERT 251 Query: 238 HVLLHIVSALEENV 251 L +V + V Sbjct: 252 KSLALVVDMCDTYV 265 >gi|195438457|ref|XP_002067153.1| GK24168 [Drosophila willistoni] gi|194163238|gb|EDW78139.1| GK24168 [Drosophila willistoni] Length = 380 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 113/321 (35%), Positives = 179/321 (55%), Gaps = 7/321 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D KV G GG G +SF + E GPDGG GG GG V QA++++ Sbjct: 51 FSDAKKVRTVGGKGGDGCVSFLQLWCNERAGPDGGDGGNGGHVIFQASNDVRNFNHVDSV 110 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 H A+ GE GM ++ G + +V+ VP+GT + G+ ++ DL + + A GG Sbjct: 111 LH--AEPGEVGMAKDCHGKNAKHMVIKVPIGTVIRNNQGL-IVGDLSKADLMFVAARGGA 167 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN F + +P G G++ L+L+ +AD+G+IG PNAGKST L ++TRA Sbjct: 168 GGKGNRFFTTDRETSPRVCEYGPSGEDVGYTLELRSMADVGLIGYPNAGKSTLLNALTRA 227 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPK+A Y FTTL P+LG V+ + + + +AD+PG++ +AH+ G+G +FLKH ER +LL Sbjct: 228 KPKVAPYAFTTLRPHLGTVQYDDHVQLTIADLPGLVPDAHRNKGLGIQFLKHAERCTLLL 287 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 ++ A ++ Y ++ EL + L ++ +++ ++ID +S T EL + Sbjct: 288 FVLDASAQDPWLHYGQLMHELQQFGGCLAQRPQLIVANKIDMDESKT---NYEELKRRLN 344 Query: 302 QVPFEFSSITGHGIPQILECL 322 Q S+ GH + Q+L+ + Sbjct: 345 QPILGISAKMGHNLAQLLQTI 365 >gi|196000713|ref|XP_002110224.1| hypothetical protein TRIADDRAFT_54006 [Trichoplax adhaerens] gi|190586175|gb|EDV26228.1| hypothetical protein TRIADDRAFT_54006 [Trichoplax adhaerens] Length = 370 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 94/259 (36%), Positives = 150/259 (57%), Gaps = 23/259 (8%) Query: 36 GGSGGRGGDVWIQATSNLNTLIDF--RYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVG 93 G GG GG+V++ A L D R + F A +GE ++ +G KG+D + +P G Sbjct: 31 GAMGGDGGEVYVVAKDG-AALFDIAQRKDRRFIAGNGENCSRQAFNGHKGKDCRIAIPTG 89 Query: 94 TQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIW 153 T + D ++ LD+ +A GG GG P + G+ GQ+++I Sbjct: 90 TLITCLDSKKVLVSLDKVDSTFTVAKGGMGG--------CPQTGPKWC--GLKGQKRMIS 139 Query: 154 LKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-KEGYKEFILAD 212 L+LKLIAD+G+IG PNAGKST L ++T AKPK+A+Y FTT+ P+LG V Y + +AD Sbjct: 140 LELKLIADVGLIGFPNAGKSTTLRALTGAKPKVANYSFTTIRPHLGTVFYPDYVKVRIAD 199 Query: 213 IPGIIKNAHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCILD-------ELS 263 +PG+I+ A Q G+G +FLKH ERT +LL I ++ + + + +++ L+ EL Sbjct: 200 LPGLIEGASQNVGMGHKFLKHVERTKLLLFIIDINGFQLSEKFSFRTPLETISLLAQELK 259 Query: 264 AYNSELRKKIEIVGLSQID 282 +Y+ EL K+ I+ +++++ Sbjct: 260 SYSHELLKRPSIIAINKVE 278 >gi|328781300|ref|XP_395391.3| PREDICTED: GTP-binding protein 5-like [Apis mellifera] Length = 604 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 122/327 (37%), Positives = 188/327 (57%), Gaps = 12/327 (3%) Query: 4 LDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQ 63 +D KV G GG G ISF + E GPDGG GG GG V QA ++ L Sbjct: 276 VDLKKVRTIGGKGGDGNISFLQLWANENAGPDGGDGGNGGHVIFQAAYDVRDL--SHLTS 333 Query: 64 HFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNG 123 KA++GE G ++ G E ++ VP+GT V +G +I DL+Q+G I A GG G Sbjct: 334 ILKAENGENGHNKSCFGKNAEHTIIHVPIGTIVRNIEG-HIIADLNQKGMMFIAARGGAG 392 Query: 124 GFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAK 183 G GNA FKS Q P + G G++ L++ +A +G+IG PNAGKST L +++RA+ Sbjct: 393 GHGNAFFKSDVYQVPRISEYGANGEDLQYVLEISSMAHVGLIGFPNAGKSTLLRTISRAR 452 Query: 184 PKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 PK+A YPFTTL P+LG+V + +++ +AD+PG+I ++H+ G+G +FLKH ER +LL Sbjct: 453 PKVAAYPFTTLKPHLGMVLYDDHEQIAVADLPGLIPDSHKNKGLGIQFLKHIERCKILLF 512 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQ 302 I+ + ++ + E++ +N +L K++ ++ +++D S T+ KK E+ Q Sbjct: 513 ILDITSDEPWRDFEILKYEITKFNIQLNKRLFLIAANKMDL--SGTM--KKLEILKQKIH 568 Query: 303 VP-FEFSSITGHGIPQILE---CLHDK 325 +P S+ G I +L+ L+DK Sbjct: 569 LPIIPISAKMGTNISILLKEIRILYDK 595 >gi|296488373|gb|DAA30486.1| GTP-binding protein 10 [Bos taurus] Length = 232 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 95/220 (43%), Positives = 130/220 (59%), Gaps = 27/220 (12%) Query: 36 GGSGGRG-----------GDVWIQATS--NLNTLIDFRYQQHFKAQHGEKGMKRNRSGAK 82 GGSGG G GDVW+ A + L L D Q+ F A G G+K Sbjct: 25 GGSGGMGYPRLGGEGGKGGDVWVVAHNRMTLKQLKDKYPQKRFVAGEGANSRVSALKGSK 84 Query: 83 GEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYAN 142 G+D + VPVG V +E+G +I +L++E R+++A GG GG K TN P Sbjct: 85 GKDCEIPVPVGVSVTDENG-KIIGELNKEKDRLLVAEGGLGG------KLLTNFLP---- 133 Query: 143 PGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IV 201 + GQ+++I L LKLIADIG++G PNAGKS+ L+ ++ AKP IADY FTT+ P LG I+ Sbjct: 134 --LKGQKRVIHLDLKLIADIGLVGFPNAGKSSLLSKISHAKPAIADYAFTTIKPELGKIM 191 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 +K+ +AD+PG+I+ AH G+G +FLKH ERT LL Sbjct: 192 YSDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTKQLL 231 >gi|302810251|ref|XP_002986817.1| hypothetical protein SELMODRAFT_124813 [Selaginella moellendorffii] gi|300145471|gb|EFJ12147.1| hypothetical protein SELMODRAFT_124813 [Selaginella moellendorffii] Length = 319 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 98/268 (36%), Positives = 143/268 (53%), Gaps = 47/268 (17%) Query: 2 KFLDEAKVYIRSGDGGAGGI-----------SFRREKFIEFG----GPDGG----SGGRG 42 K+ D+ + +RSGDGG G I ++ K + +G PDG GG G Sbjct: 9 KYFDQVTIIVRSGDGGDGAILSMPKPPADKEEAKKRKKLNWGPLRKAPDGSILLPMGGHG 68 Query: 43 GDVWIQATSNLNTLIDFRYQQHFKAQHGEKG------MKRNRSGAKGEDVVLTVPVGTQV 96 GDV I A N ++L++F ++ + A+ G R R + L VPVGT V Sbjct: 69 GDVVIAADENADSLLEFHKKKRYNARRGSDVGAVKILTPRLRDAGAAPTLKLYVPVGTVV 128 Query: 97 FEEDGISLICDLDQEGQRIILAPGGNGGFG--NAHFKSSTNQ---APYYANP-------G 144 ++ G L+ DL + G +I++A GG GG N Q AP +P G Sbjct: 129 KQKTGSKLLADLTKPGDKILVARGGRGGMSMLNNPVSRKVPQKLIAPIVTDPRDKTLIKG 188 Query: 145 ILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG 204 + G+E ++ L L+++ADIG++GLPNAGKS+ LA+V++A+P IA YPFTTL PNLG + +G Sbjct: 189 VPGEELVLELTLRVVADIGLVGLPNAGKSSLLAAVSQARPDIAAYPFTTLMPNLGRL-QG 247 Query: 205 YKEF---------ILADIPGIIKNAHQG 223 E +AD+PG+IK+AH G Sbjct: 248 DPETPDGGLCGGATMADLPGLIKDAHLG 275 >gi|322503666|emb|CBZ38752.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 487 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 101/254 (39%), Positives = 151/254 (59%), Gaps = 6/254 (2%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQAT---SNLNTLID 58 +F+D KV + SG GG G E EF GP GG+GG GG+V +Q ++L+ + D Sbjct: 14 RFVDRVKVLLCSGAGGDGASIMAHEHGNEFAGPGGGNGGNGGNVMLQCVKQHTDLSHIED 73 Query: 59 FRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 Q A G G R G +G+D+ L +P+GTQV + D + D+D+EG +I+L Sbjct: 74 LGSQ--ISAGAGFCGFSREAHGKRGQDLWLQLPLGTQVVDMDTNEVQYDMDEEGMQIVLL 131 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GNA F + + +P + G+ G + ++LK IAD G+IG PNAGKS+ L++ Sbjct: 132 EGGQGGKGNAAFANKWHHSPIESTKGLPGNTMLAQIELKTIADCGLIGYPNAGKSSLLSA 191 Query: 179 VTRAKPKIADYPFTTLYPNLGIVKEGYKEFI-LADIPGIIKNAHQGAGIGDRFLKHTERT 237 ++ +KP IA Y FTTL P +G++ + Y +ADIPG+I+ A++ G+G +FL+H ERT Sbjct: 192 ISASKPTIAPYAFTTLRPYVGVLHDLYGNVCRVADIPGLIEGAYENRGLGHQFLRHVERT 251 Query: 238 HVLLHIVSALEENV 251 L +V + V Sbjct: 252 KCLALVVDMCDTYV 265 >gi|146104007|ref|XP_001469706.1| GTP-binding protein [Leishmania infantum] gi|134074076|emb|CAM72818.1| putative GTP-binding protein [Leishmania infantum JPCM5] Length = 487 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 101/254 (39%), Positives = 151/254 (59%), Gaps = 6/254 (2%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQAT---SNLNTLID 58 +F+D KV + SG GG G E EF GP GG+GG GG+V +Q ++L+ + D Sbjct: 14 RFVDRVKVLLCSGAGGDGASIMAHEHGNEFAGPGGGNGGNGGNVMLQCVKQHTDLSHIED 73 Query: 59 FRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 Q A G G R G +G+D+ L +P+GTQV + D + D+D+EG +I+L Sbjct: 74 LGSQ--ISAGAGFCGFSREAHGKRGQDLWLQLPLGTQVVDMDTNEVQYDMDEEGMQIVLL 131 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GNA F + + +P + G+ G + ++LK IAD G+IG PNAGKS+ L++ Sbjct: 132 EGGQGGKGNAAFANKWHHSPIESTKGLPGNTMLAQIELKTIADCGLIGYPNAGKSSLLSA 191 Query: 179 VTRAKPKIADYPFTTLYPNLGIVKEGYKEFI-LADIPGIIKNAHQGAGIGDRFLKHTERT 237 ++ +KP IA Y FTTL P +G++ + Y +ADIPG+I+ A++ G+G +FL+H ERT Sbjct: 192 ISASKPTIAPYAFTTLRPYVGVLHDLYGNVCRVADIPGLIEGAYENRGLGHQFLRHVERT 251 Query: 238 HVLLHIVSALEENV 251 L +V + V Sbjct: 252 KCLALVVDMCDTYV 265 >gi|50732459|ref|XP_418645.1| PREDICTED: hypothetical protein [Gallus gallus] Length = 440 Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 119/356 (33%), Positives = 177/356 (49%), Gaps = 59/356 (16%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWI--QATSNLNTLIDFR 60 F+D+ ++Y+R GG GG+ + R RGGDVW Q S L + I R Sbjct: 83 FIDDLRLYVR---GGTGGMGYPRLGGEGG---------RGGDVWFVAQEGSTLKS-IKAR 129 Query: 61 Y-QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAP 119 Y Q+ F A G + G KG+D + VP G V ++DG I +L+ G+R + A Sbjct: 130 YPQKRFVAGTGANSSVKALKGEKGKDCEVHVPPGISVLDDDGKK-IGELNGAGERFLAAR 188 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG +TN P GQ +I+ L LKLIAD+G++G PNAGKS+ L+ + Sbjct: 189 GGLGG------SLATNFLP------CKGQRRIVHLDLKLIADVGLVGFPNAGKSSLLSKI 236 Query: 180 TRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 ++AKP+IA+Y FTT+ P LG I+ E +K+ ++AD+PG+I+ AHQ G G +FLKH ERT Sbjct: 237 SQAKPEIANYAFTTIQPELGKIMYEDFKQILVADLPGLIEGAHQNKGRGHKFLKHVERTK 296 Query: 239 VLLHIVS------ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 LL +V + + + A++ +L + + L I+ +D Sbjct: 297 HLLLVVDISGFQLSNKTQFRTAFETVLLLTKELELYNEELLTKPALLAINKMDLPCAKDN 356 Query: 293 KNELATQCGQVPFEF----------------------SSITGHGIPQILECLHDKI 326 NEL Q Q P +F S+ TG GI ++ C+ + Sbjct: 357 LNELMKQL-QNPEDFLHLLEEEVIPENTVDFREIIPISTYTGEGIEELKACVRRSL 411 >gi|157877092|ref|XP_001686878.1| GTP-binding protein [Leishmania major strain Friedlin] gi|68129953|emb|CAJ09261.1| putative GTP-binding protein [Leishmania major strain Friedlin] Length = 487 Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 100/247 (40%), Positives = 149/247 (60%), Gaps = 6/247 (2%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQAT---SNLNTLID 58 +F+D KV + SG GG G E EF GP GG+GG GG+V +Q ++L+ + D Sbjct: 14 RFVDRVKVLLCSGAGGDGASIMAHEHGNEFAGPGGGNGGNGGNVMLQCVKQHTDLSHIED 73 Query: 59 FRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 Q A G G R G +G+D+ L +P+GTQV + D + D+D+EG +I+L Sbjct: 74 LGSQ--ISAGAGCCGFSREAHGKRGQDLWLQLPLGTQVVDMDTNEVQYDMDEEGMQIVLL 131 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GNA F + + +P + G+ G + ++LK IAD G+IG PNAGKS+ L++ Sbjct: 132 EGGQGGKGNAAFANKWHHSPIESTKGLPGNTMLAQIELKTIADCGLIGYPNAGKSSLLSA 191 Query: 179 VTRAKPKIADYPFTTLYPNLGIVKEGYKEFI-LADIPGIIKNAHQGAGIGDRFLKHTERT 237 ++ +KP IA Y FTTL P +G++ + Y +ADIPG+I+ A++ G+G +FL+H ERT Sbjct: 192 ISASKPTIAPYAFTTLRPYVGVLHDLYGNVCRVADIPGLIEGAYENRGLGHQFLRHVERT 251 Query: 238 HVLLHIV 244 L +V Sbjct: 252 KCLALVV 258 >gi|167527311|ref|XP_001747988.1| hypothetical protein [Monosiga brevicollis MX1] gi|163773737|gb|EDQ87375.1| predicted protein [Monosiga brevicollis MX1] Length = 432 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 106/285 (37%), Positives = 154/285 (54%), Gaps = 7/285 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 +KF+D + +R G GG G +++ R P+G GGRGGDV + A ++TL Sbjct: 87 VKFVDHKSIVVRGGRGGNGCVAWYRNSARTRKFPEGADGGRGGDVILVADGGMSTLATV- 145 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 G+ G N GA + VPVGT + DG ++ DL + GQ + A G Sbjct: 146 -PPVMVGYAGKPGGSANMLGAAAPPRRMRVPVGT-LIHRDG-EVVADLTEPGQEFLAARG 202 Query: 121 GNGGFGNAH-FKSSTNQAPYYANP-GILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 G G GN + + Q P G G++ L+ IAD+G++GLPNAGKSTFL + Sbjct: 203 GAAGRGNTGGLERTRAQQPMDERAVGKPGEDIRYLFDLRTIADVGLVGLPNAGKSTFLNA 262 Query: 179 VTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 V+ A P+IAD+PFTTL P+ G+V Y +AD+PG+I A Q G+G RFLKH ER Sbjct: 263 VSNAHPRIADFPFTTLNPHCGVVDFPDYFRLRIADVPGLIAGASQNVGLGHRFLKHVERN 322 Query: 238 HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 +L++I+ + + I DEL AYN L ++ +V +++D Sbjct: 323 RILVYIIDVSRPDCCEQFCIIRDELQAYNPALVERQTLVVANKMD 367 >gi|324512635|gb|ADY45228.1| GTP-binding protein 5 [Ascaris suum] Length = 384 Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 111/326 (34%), Positives = 185/326 (56%), Gaps = 17/326 (5%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F+D +V ++G+GG G +SF R + +GGPDGG GG G V +QA ++ L R Sbjct: 45 VSFVDFKRVTCKAGNGGNGMVSFFRGFRVPYGGPDGGDGGHGAHVILQADESVKDLS--R 102 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 A++GE G ++ G + +++ VP+GT V + + +++ +L G + A G Sbjct: 103 LNSVITAKNGEYGKPKSCHGKSAKHLIVKVPLGTVVKQINTNTVLAELTSPGSIFLAARG 162 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN + S++ + P A G +G+EK ++++++A G++G PNAGKS+ L +++ Sbjct: 163 GAGGHGNQFYVSNSVRTPIKAEFGGIGEEKCYDIEMRIMATAGLVGFPNAGKSSLLRAIS 222 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 RAKPK+A YPFTTL ++GIV + Y + +ADIPG+I+ +H+ G+G FLKH R H Sbjct: 223 RAKPKVACYPFTTLNAHVGIVHYDDYVQISVADIPGLIEGSHKNIGLGFSFLKHITRCHC 282 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID----TVDSDTLARK--K 293 L ++ +Q + + EL ++ L KK + +++ D D+D + R+ Sbjct: 283 LFFVLDLSLSQLQEQFDSLRGELGHFDESLLKKSSTIVVNKYDLAPKNFDTDEVRRRFAP 342 Query: 294 NELATQCGQVPFEFSSITGHGIPQIL 319 NE+ F S+ G GI Q+L Sbjct: 343 NEV--------FFTSAKFGIGIEQLL 360 >gi|225718426|gb|ACO15059.1| GTP-binding protein 10 homolog [Caligus clemensi] Length = 394 Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 105/304 (34%), Positives = 163/304 (53%), Gaps = 45/304 (14%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 ++D +VY++ G GG G S G GG V I + + +L+ Y+ Sbjct: 16 WIDSLRVYVKGGHGGNGLPSIGGAG------------GPGGSVLISPSRKVKSLMKV-YK 62 Query: 63 QHFKAQHGEK-----GMKRNRS---GAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQR 114 +F + ++ G +RS G GED+ VP+G Q+F+ D L+ DL E Sbjct: 63 DNFDGEQKQRLVASSGNHSSRSIILGQSGEDITFQVPLGIQIFD-DHQRLLKDLGSEEVL 121 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 + +A GGNGG +Q + PG Q + I L LK+IAD+G++G PNAGKS Sbjct: 122 VKVAAGGNGG---------CSQNGWIGQPG---QSRHIRLDLKIIADVGLVGFPNAGKSI 169 Query: 175 FLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLK 232 L +++RAKPKIA YPFTT+ PNLG + + +LAD+PG+I+ A G+G RFLK Sbjct: 170 LLKAISRAKPKIASYPFTTIQPNLGEVLYSSDMRRIVLADLPGLIEGASYNVGMGHRFLK 229 Query: 233 HTERTHVLLHIVSA----LEE--NVQAAYQCIL---DELSAYNSELRKKIEIVGLSQIDT 283 + ERT +LL I+ L+E ++A++ ++ E+ YN +L +K + +++DT Sbjct: 230 YLERTRLLLFIIDVNGFKLKEGSTYRSAFETLVLLNKEIQLYNPDLLEKPCVCVFNKMDT 289 Query: 284 VDSD 287 S+ Sbjct: 290 EGSE 293 >gi|167463849|ref|ZP_02328938.1| GTPase ObgE [Paenibacillus larvae subsp. larvae BRL-230010] Length = 327 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/228 (39%), Positives = 144/228 (63%), Gaps = 6/228 (2%) Query: 108 LDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGL 167 L + GQ +I+A GG GG GN F + N AP A G GQE+ + L+LK++AD+G++G Sbjct: 1 LTRHGQEVIVAKGGRGGRGNMRFATPKNSAPEIAENGEEGQERWVVLELKVMADVGLVGF 60 Query: 168 PNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGI 226 P+ GKST L+ V+ A+PKI Y FTTL PNLG+V G + F++AD+PG+I+ AH+G G+ Sbjct: 61 PSVGKSTLLSIVSGARPKIGAYHFTTLTPNLGVVDVGDGRSFVMADLPGLIQGAHEGVGL 120 Query: 227 GDRFLKHTERTHVLLHI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT 283 G FL+H ERT V+ H+ ++A E + YQ I DEL YN++L ++ +IV +++D Sbjct: 121 GHEFLRHVERTRVIAHVLDMAATEGRDPYDDYQKINDELKLYNAKLEERPQIVVANKMDM 180 Query: 284 VDSDT-LARKKNELATQCGQVPF-EFSSITGHGIPQILECLHDKIFSI 329 +++ L + K L+ +V S+++ G+ ++ + D + +I Sbjct: 181 PEAEEHLEQFKANLSKAGDEVEIVPISAVSRSGVQVLMYKIADLLETI 228 >gi|301117278|ref|XP_002906367.1| GTPase [Phytophthora infestans T30-4] gi|262107716|gb|EEY65768.1| GTPase [Phytophthora infestans T30-4] Length = 428 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/266 (37%), Positives = 142/266 (53%), Gaps = 26/266 (9%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D +V G GG G SF E + P+GG GG GGDV I+A+ + L Sbjct: 74 RFVDRIRVKATGGHGGNGCASFFSESAMR-KRPNGGHGGAGGDVVIEASDKMQNLAS--A 130 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV-----FE---EDG-------ISLIC 106 HFK G GM + +G +G+ + VP GT V +E EDG + ++ Sbjct: 131 THHFKGGAGTNGMPNDSAGRRGKHCHVKVPCGTLVKRVERYERELEDGEYEIVDRMEVVA 190 Query: 107 DLDQEGQRIILAPGGNGGFGNAHFKSSTNQ-------APYYANPGILGQEKIIWLKLKLI 159 DLD G + A GG G GN T + P G G + L+LK I Sbjct: 191 DLDTPGAAFLAAKGGKPGLGNRILAGKTTKFGRLRKHMPESKTTGSPGTSQYYELELKTI 250 Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIK 218 AD+G++G PNAGKST L+ ++RA P+IA YPFTTL+P +GIV+ +ADIPG+I Sbjct: 251 ADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEFPDTFRLSMADIPGLID 310 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 AH+ G+G FL+H ERT +L++++ Sbjct: 311 GAHRNVGLGHDFLRHIERTKILMYVL 336 >gi|255538792|ref|XP_002510461.1| GTP-dependent nucleic acid-binding protein engD, putative [Ricinus communis] gi|223551162|gb|EEF52648.1| GTP-dependent nucleic acid-binding protein engD, putative [Ricinus communis] Length = 474 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 113/334 (33%), Positives = 166/334 (49%), Gaps = 60/334 (17%) Query: 2 KFLDEAKVYIRSGDGGAGGI-------------------SFRREKFIEFGG----PDGGS 38 K+ D+ + +RSGDGG G I + + +F G P Sbjct: 68 KYFDQVIITVRSGDGGHGAILNMPQPQQKSSDVKSKKKQNKKSSYKRDFDGSLILP---M 124 Query: 39 GGRGGDVWIQATSNLNTLIDFRYQQHFKAQHG----EKGMKRN--RSGAKGEDVVLTVPV 92 GG GGDV I A + L++F + F A+ G G+ + G + + VPV Sbjct: 125 GGHGGDVVIYADEGKDFLLEFHSKSRFNAKRGGNVDAMGVLNSLLHDGFAAPTLRIPVPV 184 Query: 93 GTQVFEEDGISLICDLDQEGQRIILAPGGNGGFG----------------NAHFKSSTNQ 136 GT V + G L+ DL Q G I++A GG GG + +++ Sbjct: 185 GTVVKHKRG-KLLADLTQPGDEILVARGGQGGISLLDAPEHRRKRLMALTTNVLRDDSDK 243 Query: 137 APYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP 196 PG +E + L L+++AD+G++GLPNAGKST LA++T A+P IADYPFTTL P Sbjct: 244 VLVLGQPG---EEVNLELILRVVADVGLVGLPNAGKSTLLAAITHARPDIADYPFTTLMP 300 Query: 197 NLGIVKEG--------YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 NLG + E LAD+PG+I+ AH G G+G FL+H RT +L+H+V A Sbjct: 301 NLGRLDGDPTLGAAMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAAA 360 Query: 249 ENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 E+ Y+ + +EL YN E ++ +V L++ID Sbjct: 361 EDPVNDYRTVKEELRMYNPEYLERPHVVVLNKID 394 >gi|194863131|ref|XP_001970291.1| GG23451 [Drosophila erecta] gi|190662158|gb|EDV59350.1| GG23451 [Drosophila erecta] Length = 381 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 113/325 (34%), Positives = 175/325 (53%), Gaps = 15/325 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D K+ G GG G +SF + E GPDGG GG GG V QA++ D R Sbjct: 52 FSDAKKIRAIGGKGGDGCVSFLQLWCNERAGPDGGDGGNGGHVVFQASN------DVRNF 105 Query: 63 QH----FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 H KA+ GE G ++ G + V+ VP+GT + G+ ++ DL Q + A Sbjct: 106 NHVGSVLKAEEGEPGSSKDCHGKNAKHSVIKVPIGTVIRNAQGL-IVGDLGQADLMFVAA 164 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GN F + +P + G +G+ L+L+ +AD+G+IG PNAGKST L + Sbjct: 165 RGGAGGKGNRFFTTDKETSPKVSEYGPMGENLSYTLELRSMADVGLIGYPNAGKSTLLNA 224 Query: 179 VTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 +TRAKPK+A Y FTTL P+LG V+ + + + +AD+PG++ +AH+ G+G +FLKH ER Sbjct: 225 LTRAKPKVAPYAFTTLRPHLGTVQYDDHVQLTIADLPGLVPDAHRNKGLGIQFLKHAERC 284 Query: 238 HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +LL ++ A Y+ ++ EL + L + ++V +++D +S + EL Sbjct: 285 TLLLFVLDASAPEPWTHYEQLMHELRQFGGRLASRPQLVVANKLDVEESQS---NFEELQ 341 Query: 298 TQCGQVPFEFSSITGHGIPQILECL 322 + S+ GH + Q+L + Sbjct: 342 RRLQNPVLGISAKMGHNLGQLLNSI 366 >gi|149734262|ref|XP_001491141.1| PREDICTED: similar to GTP binding protein 5 [Equus caballus] Length = 405 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 89/244 (36%), Positives = 139/244 (56%), Gaps = 6/244 (2%) Query: 70 GEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAH 129 GE G ++N G G + + VP+GT V ++G ++ DL G + A GG GG GN Sbjct: 136 GEDGGRKNCFGRNGALLYIRVPLGTLV--KEGHEVVADLSHPGDEYVAALGGAGGKGNRF 193 Query: 130 FKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADY 189 F ++ N+AP PG GQE++++L+LK +A G++G PNAGKS+ L +++ AKP +A Y Sbjct: 194 FLANDNRAPVTCTPGQPGQERVLFLELKTVAHAGMVGFPNAGKSSLLRAISNAKPTVASY 253 Query: 190 PFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 PFTTL P++GIV E +++ +ADIPG+++ AH+ G+G FL+H ER LL +V Sbjct: 254 PFTTLNPHVGIVHYEDHQQIAVADIPGLVRGAHRNRGLGCAFLRHVERCRFLLFVVDLSV 313 Query: 249 ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFS 308 + + EL Y L + + ++ID ++ + EL + GQ S Sbjct: 314 PEPWTQVEDLKYELEKYEEGLSARPHAIVANKIDLPEARA---RLPELQARLGQKAIALS 370 Query: 309 SITG 312 + TG Sbjct: 371 AATG 374 >gi|154346006|ref|XP_001568940.1| GTP-binding protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134066282|emb|CAM44073.1| putative GTP-binding protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 487 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 98/251 (39%), Positives = 150/251 (59%), Gaps = 6/251 (2%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQAT---SNLNTLID 58 +F+D KV + SG GG G E EF GP GG+GG GG+V ++ ++L+ + D Sbjct: 14 RFVDRVKVLLCSGAGGDGASIMAHEHGNEFAGPGGGNGGNGGNVMLRCAKQYTDLSHIED 73 Query: 59 FRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 Q A G G R G +G+D+ L +P+GTQV + D + D+D+EG +I+L Sbjct: 74 MGSQ--ISAGAGCCGFSREAHGKRGQDLWLPLPLGTQVVDMDTNEVQYDMDEEGMQIVLL 131 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GNA F + + +P + G+ G + ++LK IAD G++G PNAGKS+ L++ Sbjct: 132 EGGQGGKGNAAFANKWHHSPIESTNGLPGNTMLAQIELKTIADCGLVGYPNAGKSSLLSA 191 Query: 179 VTRAKPKIADYPFTTLYPNLGIVKEGYKEFI-LADIPGIIKNAHQGAGIGDRFLKHTERT 237 ++ +KP IA Y FTTL P +G++ + Y +ADIPG+I+ A++ G+G +FL+H ERT Sbjct: 192 ISASKPTIAPYAFTTLRPYVGVLHDLYGNVCRVADIPGLIEGAYENRGLGHQFLRHVERT 251 Query: 238 HVLLHIVSALE 248 L +V + Sbjct: 252 KCLALVVDMCD 262 >gi|254227132|ref|ZP_04920677.1| hypothetical GTP-binding protein YhbZ [Vibrio cholerae V51] gi|125620346|gb|EAZ48735.1| hypothetical GTP-binding protein YhbZ [Vibrio cholerae V51] Length = 263 Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 76/164 (46%), Positives = 112/164 (68%), Gaps = 4/164 (2%) Query: 128 AHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIA 187 A FKSS N++P G G+ + I L+L L+AD+G++G+PNAGKSTF+ +V+ AKPK+A Sbjct: 1 ARFKSSVNRSPRQKTLGTKGELRDIRLELLLLADVGMLGMPNAGKSTFIRAVSAAKPKVA 60 Query: 188 DYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 DYPFTTL P+LG+V K F++ADIPG+I+ A +GAG+G RFLKH ER VLLH++ Sbjct: 61 DYPFTTLVPSLGVVSVLPEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHMIDI 120 Query: 247 L-EENVQAAYQC--ILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 + + A+ I+DEL Y+ +L KK + +++D + + Sbjct: 121 MPADQSDPAHNALTIIDELEQYSEKLAKKPRWLVFNKVDLMSEE 164 >gi|91083037|ref|XP_974807.1| PREDICTED: similar to AGAP008337-PA [Tribolium castaneum] Length = 385 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 107/319 (33%), Positives = 164/319 (51%), Gaps = 44/319 (13%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D KV++ G GG G F GG+GGDV + N++ F+ Sbjct: 24 FRDSLKVFVSGGTGGNGLPKFGG------------VGGQGGDVIAVGSDNISLQDVFKRN 71 Query: 63 QH--FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q + A+ G G GE + VPVG V E G I +++ +G+ ++LA G Sbjct: 72 QSKSYTAKAGRHSSHNFILGPPGESLKFEVPVGVTVITELGKK-IGEINNKGEELLLAKG 130 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG P G GQ + LKLIAD+G++G PNAGKST L +++ Sbjct: 131 GTGG------------NPKNGYLGTKGQAYPVIFDLKLIADVGLVGFPNAGKSTLLKAIS 178 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIA YPFTT+ PN+GI++ + +E +AD+PG+I+ A+ G+G +FLKH ERT + Sbjct: 179 HAKPKIASYPFTTVRPNVGIIQYKDLREISMADLPGLIEGAYANKGMGHKFLKHVERTKL 238 Query: 240 LLHIV--SALEENVQAAYQCILD-------ELSAYNSELRKKIEIVGLSQIDTVDS---- 286 LL +V + + + Q ++ L+ EL YN +L +K ++ ++++DT +S Sbjct: 239 LLLVVDINGFQLSPQYPHRSCLETVLLLNKELELYNKDLLEKPSMLVINKMDTENSHQKY 298 Query: 287 ---DTLARKKNELATQCGQ 302 L + + A QC + Sbjct: 299 SEIKDLLKNLTDAARQCPE 317 >gi|219115689|ref|XP_002178640.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217410375|gb|EEC50305.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 652 Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 93/268 (34%), Positives = 148/268 (55%), Gaps = 30/268 (11%) Query: 39 GGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 GG G Q+T+ L + F+A++G G ++ ++G G+DV + VP GT V E Sbjct: 192 GGSGAAAAPQSTATLRP-------KSFRAENGSDGDRQFKNGRYGKDVYIRVPPGTVVQE 244 Query: 99 E----DGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWL 154 E D L + + ++ G G ++ + P P G K++ L Sbjct: 245 EISPGDYRELGSLTEVTDELVVAQGGQGGEGTGVQGRNRGVRRPRI--PATGGDRKVLKL 302 Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI------VKE----- 203 LK++AD+ ++G+PNAGKSTFLA+VTRAKPKIA+YPFTT+ PNLG+ ++E Sbjct: 303 TLKIVADVALVGVPNAGKSTFLAAVTRAKPKIANYPFTTVIPNLGVWIPGGALEEAQSSQ 362 Query: 204 -----GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCI 258 G + +L D+PG+I A QG G+G FL+H ER HV+LH++ A + A Y+ + Sbjct: 363 PDKGAGSEGLVLCDVPGLIAGAAQGVGLGHAFLRHVERCHVILHLIDATSNDPAADYEML 422 Query: 259 LDELSAYNS-ELRKKIEIVGLSQIDTVD 285 E+ Y + +L + ++V +++ID + Sbjct: 423 NREIVKYGTGQLAQMPQVVVINKIDAFE 450 >gi|71401680|ref|XP_803715.1| GTP-binding protein [Trypanosoma cruzi strain CL Brener] gi|70866466|gb|EAN81997.1| GTP-binding protein, putative [Trypanosoma cruzi] Length = 512 Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 93/244 (38%), Positives = 148/244 (60%), Gaps = 2/244 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ + SG GG G E EF GP GG+GG GG+V ++ + + L + Sbjct: 57 FVDAVKMLVSSGAGGDGASVMSHENGNEFAGPGGGNGGNGGNVMLRCSKRIADLSHLKEM 116 Query: 63 -QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 A G G R G +G+D++L +PVGT+V + D ++ D+D++G ++L GG Sbjct: 117 GSQITASPGSVGFARTAHGKRGKDLLLELPVGTEVVDLDTNEVVYDVDEDGMELLLLEGG 176 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA F + + +P + G+ G ++ +LK IAD+G+IG PNAGKS+ L++++ Sbjct: 177 QGGKGNAAFANKWHHSPTESTRGLPGNTMLVQFELKTIADVGLIGYPNAGKSSLLSAIST 236 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +KP IA Y FTTL P +G++ + Y +AD+PG+I+ A++ G+G +FL+H ERT L Sbjct: 237 SKPMIAPYVFTTLRPYVGVIHDLYGNTCRVADLPGLIEGAYENRGLGHQFLRHVERTQSL 296 Query: 241 LHIV 244 ++V Sbjct: 297 AYVV 300 >gi|225458137|ref|XP_002280904.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 506 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 113/333 (33%), Positives = 166/333 (49%), Gaps = 56/333 (16%) Query: 2 KFLDEAKVYIRSGDGGAGGI-------------------------SFRREKFIEFGGPDG 36 K+ D+ + +RSGDGG G I S++R+ P Sbjct: 77 KYFDQVLITVRSGDGGHGAILSMPNQRAPSKPQGKHDKDKMRKKSSYKRDFDGSLILP-- 134 Query: 37 GSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHG----EKGMKRNR--SGAKGEDVVLTV 90 GG GG V I A ++L++F + A+ G G+ ++ G + + V Sbjct: 135 -MGGHGGGVIIYADEGEDSLLEFHKKSRHNAKRGGNVDAMGVLTSQLHDGLAAPTLRIPV 193 Query: 91 PVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFG--------NAHFKSSTNQAPYYAN 142 PVGT V + G L+ DL Q G I++A GG GG + T N Sbjct: 194 PVGTVVKRKRG-KLLADLAQPGDEILVARGGQGGISLIEMPEHKRKKLMALTTNVMRDDN 252 Query: 143 PGIL-----GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN 197 +L G+E + L L+++AD+G++GLPNAGKST LA++T AKP IADYPFTTL PN Sbjct: 253 DKVLVLGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLAAITLAKPDIADYPFTTLMPN 312 Query: 198 LGIVK--------EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 LG + + E LAD+PG+I+ AH G G+G FL+H RT +L+H+V A E Sbjct: 313 LGRLDGDPSLGAGKYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAAAE 372 Query: 250 NVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 + Y+ + +EL YN ++ +V L++ID Sbjct: 373 DPVKDYRTVKEELRMYNPNYLERPYVVVLNKID 405 >gi|302142573|emb|CBI19776.3| unnamed protein product [Vitis vinifera] Length = 509 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 113/333 (33%), Positives = 166/333 (49%), Gaps = 56/333 (16%) Query: 2 KFLDEAKVYIRSGDGGAGGI-------------------------SFRREKFIEFGGPDG 36 K+ D+ + +RSGDGG G I S++R+ P Sbjct: 80 KYFDQVLITVRSGDGGHGAILSMPNQRAPSKPQGKHDKDKMRKKSSYKRDFDGSLILP-- 137 Query: 37 GSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHG----EKGMKRNR--SGAKGEDVVLTV 90 GG GG V I A ++L++F + A+ G G+ ++ G + + V Sbjct: 138 -MGGHGGGVIIYADEGEDSLLEFHKKSRHNAKRGGNVDAMGVLTSQLHDGLAAPTLRIPV 196 Query: 91 PVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFG--------NAHFKSSTNQAPYYAN 142 PVGT V + G L+ DL Q G I++A GG GG + T N Sbjct: 197 PVGTVVKRKRG-KLLADLAQPGDEILVARGGQGGISLIEMPEHKRKKLMALTTNVMRDDN 255 Query: 143 PGIL-----GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN 197 +L G+E + L L+++AD+G++GLPNAGKST LA++T AKP IADYPFTTL PN Sbjct: 256 DKVLVLGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLAAITLAKPDIADYPFTTLMPN 315 Query: 198 LGIVK--------EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 LG + + E LAD+PG+I+ AH G G+G FL+H RT +L+H+V A E Sbjct: 316 LGRLDGDPSLGAGKYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAAAE 375 Query: 250 NVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 + Y+ + +EL YN ++ +V L++ID Sbjct: 376 DPVKDYRTVKEELRMYNPNYLERPYVVVLNKID 408 >gi|148230757|ref|NP_001088518.1| GTP-binding protein 10 [Xenopus laevis] gi|82180103|sp|Q5U528|GTPBA_XENLA RecName: Full=GTP-binding protein 10 gi|54311272|gb|AAH84856.1| LOC495388 protein [Xenopus laevis] Length = 383 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 110/352 (31%), Positives = 166/352 (47%), Gaps = 51/352 (14%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++Y++ GG GG+ R G D + G L + D Sbjct: 15 FVDNLRIYVK---GGTGGMGLPRLGGQGGNGGDVCLLAKKG-------VTLKNIKDKYPH 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F G R G GE + VP G + E G+ I +LD+EG I +A GG+ Sbjct: 65 KRFIGGVGVNSSVRALKGLAGEVCQVEVPPGIVITNEHGVK-IGELDKEGDEIRVARGGH 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG F S GQ ++I L LKLI+D+G++G PNAGKS+ L ++ A Sbjct: 124 GGIFKTDFLPSK------------GQTRVIHLDLKLISDVGLVGFPNAGKSSLLGKISHA 171 Query: 183 KPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP++ADY FTT+ P LG I+ YK+ +AD+PG+I+ AH G+G +FLKH ERT LL Sbjct: 172 KPQVADYAFTTVKPELGKIMYPDYKQVSVADLPGLIEGAHYNRGMGHKFLKHIERTKQLL 231 Query: 242 HIVSALEENVQAAYQC---------ILDELSAYNSELRKKIEIVGLSQIDTVDSD-TLAR 291 +V + A C ++ EL Y EL K ++ ++++D ++D L Sbjct: 232 FVVDIAGFQLSAITPCRSAFETVQLLILELQLYKEELLDKPAVLAVNKMDLPNADEKLGE 291 Query: 292 KKNELATQCG-------------QVPFE----FSSITGHGIPQILECLHDKI 326 +L G Q+ F+ S+ TG G+ ++ C+ I Sbjct: 292 LLKQLENPTGNLHSLPDELVPERQIEFKHIVPVSAATGQGLEDLIGCIRKTI 343 >gi|195473017|ref|XP_002088793.1| GE11035 [Drosophila yakuba] gi|194174894|gb|EDW88505.1| GE11035 [Drosophila yakuba] Length = 384 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 112/325 (34%), Positives = 174/325 (53%), Gaps = 15/325 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D ++ G GG G +SF + E GPDGG GG GG V QA++ D R Sbjct: 52 FSDSKRIRAVGGKGGDGCVSFLQLWCNERAGPDGGDGGHGGHVVFQASN------DVRNF 105 Query: 63 QH----FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 H KA+ GE G ++ G + V+ VP+GT + G ++ DL Q + A Sbjct: 106 NHVGSILKAEEGEPGSSKDCHGKNAKHYVIKVPIGTVIRNAQG-QIVGDLGQANLMFVAA 164 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GN F + +P + G G++ L+L+ +AD+G+IG PNAGKST L + Sbjct: 165 RGGAGGKGNRFFTTDKETSPKVSEYGPRGEDLSYTLELRSMADVGLIGYPNAGKSTLLNA 224 Query: 179 VTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 +TRAKPK+A Y FTTL P+LG V+ + + + +AD+PG++ +AH+ G+G +FLKH ER Sbjct: 225 LTRAKPKVAPYAFTTLRPHLGTVQYDDHVQLTIADLPGLVPDAHRNKGLGIQFLKHAERC 284 Query: 238 HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +LL ++ A A Y+ ++ EL + L + ++V +++D + + EL Sbjct: 285 TLLLFVLDASAPEPWAHYEQLMHELRQFGGRLASRPQLVVANKLDVEEGQS---NFEELQ 341 Query: 298 TQCGQVPFEFSSITGHGIPQILECL 322 + S+ GH + Q+L + Sbjct: 342 RRLQNPVLGISAKMGHNLGQLLNSI 366 >gi|170593109|ref|XP_001901307.1| GTP1/OBG family protein [Brugia malayi] gi|158591374|gb|EDP29987.1| GTP1/OBG family protein [Brugia malayi] Length = 378 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 103/270 (38%), Positives = 155/270 (57%), Gaps = 7/270 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ ++ ++G+GG G +SFRRE + FGGPDGG GG GG + + + L R Sbjct: 44 FVDQKRINCKAGNGGDGMVSFRREAGVMFGGPDGGDGGNGGHIIFEVDPCVKDLS--RIP 101 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 KA +GE G ++ G ++ VPVGT E +I DLD+EG + A GG Sbjct: 102 TMIKAMNGEGGHPKSCHGKSAHHKIIKVPVGTVFKEPHTDKVIIDLDKEGAIFLAARGGA 161 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +K++ + P A G LG+E +++ IA G+IG PNAGKS+ L +++RA Sbjct: 162 GGHGNQFYKTNEMRIPLKAELGGLGEELTYDVEMCRIATAGLIGYPNAGKSSLLRAISRA 221 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 KPK+A YPFTTL +G+V Y++FI +ADIPGI++ +H G+G FL+H R H Sbjct: 222 KPKVACYPFTTLTAYIGVVH--YEDFIQVAVADIPGIVEGSHADVGLGHSFLRHITRCHC 279 Query: 240 LLHIVSALEENVQAAYQCILDELSAYNSEL 269 L +++ ++ + + E+ Y L Sbjct: 280 LFYVLDLTLSQLRKQFDSLKFEVDQYQHGL 309 >gi|312068697|ref|XP_003137335.1| GTP1/OBG family protein [Loa loa] gi|307767499|gb|EFO26733.1| GTP1/OBG family protein [Loa loa] Length = 378 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 110/319 (34%), Positives = 175/319 (54%), Gaps = 7/319 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ ++ ++G+GG G +SFRRE + FGGPDGG GG GG + + + L R Sbjct: 44 FVDQRRINCKAGNGGDGMVSFRREAGVMFGGPDGGDGGNGGHIIFEVDPLVKDLS--RLP 101 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 KA +GE G ++ G V+ VP+GT E +I DL++EG + A GG Sbjct: 102 TMIKAMNGEGGHSKSCHGKSAPHKVIKVPIGTMFKEPHTERVITDLNKEGAVFLAARGGA 161 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN +K++ + P A G +G+E +++ IA G+IG PNAGKS+ L ++RA Sbjct: 162 GGHGNQFYKTNEVRVPLKAELGGIGEELTYDVEMCRIATAGLIGYPNAGKSSLLRVISRA 221 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPK+A YPFTTL +GIV + + + +ADIPG+++ +H G+G FLKH R H L Sbjct: 222 KPKVACYPFTTLTAYVGIVHYDDFTQIAVADIPGLVEGSHLDVGLGHSFLKHITRCHCLF 281 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC- 300 +++ ++ + + E++ Y L + + ++++D D K+ + Q Sbjct: 282 YVLDLTLSQLREQFDSLKFEVNQYQQGLGSRSSTIIINKMDLASLDF---DKDAIRQQFP 338 Query: 301 GQVPFEFSSITGHGIPQIL 319 G F S+ G GI ++L Sbjct: 339 GYSIFFISTKFGTGIEELL 357 >gi|242005423|ref|XP_002423568.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212506697|gb|EEB10830.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 394 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 90/244 (36%), Positives = 138/244 (56%), Gaps = 29/244 (11%) Query: 55 TLIDFRYQQHFK----AQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQ 110 T+++ ++++ K A+ GE G G DV++ VP G V++E + + +L+ Sbjct: 66 TILNHTWKKYSKLLVTAESGENSKTMKVFGKPGNDVIIPVPPGVVVYDE-FMRKMGELNA 124 Query: 111 EGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNA 170 G +I++A GG GG N P Y+ G G ++I + LKLIADIG++G PNA Sbjct: 125 VGDKIMVAEGGPGG--------GPNSVPAYS--GSKGHSQLITIDLKLIADIGLVGFPNA 174 Query: 171 GKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDR 229 GKST L S++RAKPKIADY FTTL P+LGI++ ++ +AD+PG+++ A G+G Sbjct: 175 GKSTLLNSLSRAKPKIADYAFTTLRPHLGILEYSDLRKISMADLPGLVEGASDDVGMGHE 234 Query: 230 FLKHTERTHVLLHIVSALEENVQAAYQC-----------ILDELSAYNSELRKKIEIVGL 278 FLKH ER+ +LL +V Q QC + EL Y SEL K ++ + Sbjct: 235 FLKHVERSSLLLLVVDIF--GFQLTPQCSHRNCIESVILLNKELELYKSELLDKPAVLAI 292 Query: 279 SQID 282 +++D Sbjct: 293 NKMD 296 >gi|71402860|ref|XP_804292.1| GTP-binding protein [Trypanosoma cruzi strain CL Brener] gi|70867184|gb|EAN82441.1| GTP-binding protein, putative [Trypanosoma cruzi] Length = 499 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 92/244 (37%), Positives = 148/244 (60%), Gaps = 2/244 (0%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ + SG GG G E EF GP GG+GG GG+V ++ + + L + Sbjct: 44 FVDAVKMLVSSGAGGDGASVMSHENGNEFAGPGGGNGGNGGNVMLRCSKRIADLSHLKEM 103 Query: 63 -QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 A G G R G +G+D++L +PVGT+V + D ++ D+D++G ++L GG Sbjct: 104 GSQITASPGSVGFARTAHGKRGKDLLLELPVGTEVVDLDTNEVVYDVDEDGMELLLLEGG 163 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA F + + +P + G+ G ++ +LK +AD+G+IG PNAGKS+ L++++ Sbjct: 164 QGGKGNAAFANKWHHSPTESTRGLPGNTMLVQFELKTMADVGLIGYPNAGKSSLLSAIST 223 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +KP IA Y FTTL P +G++ + Y +AD+PG+I+ A++ G+G +FL+H ERT L Sbjct: 224 SKPMIAPYVFTTLRPYVGVIHDLYGNTCRVADLPGLIEGAYENRGLGHQFLRHVERTQSL 283 Query: 241 LHIV 244 ++V Sbjct: 284 AYVV 287 >gi|37912980|gb|AAR05312.1| predicted GTPase protein [uncultured marine gamma proteobacterium EB000-45B06] Length = 185 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 89/182 (48%), Positives = 125/182 (68%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DEA + +R+G+GGAG SFRREK+I FGGPDGG GG+G DV + N NTLIDF+ Sbjct: 1 MNFIDEAFLEVRAGNGGAGASSFRREKYIPFGGPDGGDGGKGADVVFRVNLNKNTLIDFQ 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 ++ F A++G G +N++G+ ED+V+ +P GT ++++ + D + +LA G Sbjct: 61 NKRVFIAKNGRPGSGKNKTGSAAEDLVIDIPKGTVIYDDISGDELLDCCDDDIEYVLAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG GNA FKSSTNQAP G G+ + I L+LK +AD+G++G PNAGKSTFL V+ Sbjct: 121 GDGGQGNARFKSSTNQAPRKFTLGFEGEVRFIRLELKSLADVGLVGFPNAGKSTFLNKVS 180 Query: 181 RA 182 A Sbjct: 181 SA 182 >gi|332977934|gb|EGK14679.1| Spo0B-associated GTP-binding protein [Desmospora sp. 8437] Length = 297 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 79/208 (37%), Positives = 128/208 (61%), Gaps = 7/208 (3%) Query: 130 FKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADY 189 F S N AP+ A G G E+ + L+LKL+AD G++G P+ GKST L++V+ A+PK+ Y Sbjct: 1 FSSPKNPAPHVAENGEPGVERWVELELKLLADAGLVGYPSVGKSTLLSAVSAARPKVGAY 60 Query: 190 PFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 FTT++PNLG+V+ E + F++AD+PG+I+ AH G G+G +FL+H ERT VL+H+V Sbjct: 61 HFTTIHPNLGVVETEDGRSFVMADLPGLIEGAHTGVGLGHQFLRHVERTRVLVHVVDMAG 120 Query: 249 ENVQAAYQCIL---DELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELATQCGQVP 304 + Y+ L +EL Y EL + +IV +++D ++ + L R K + + P Sbjct: 121 SEGRDPYEDWLQINEELRLYRKELADRPQIVAANKMDLPEAKENLERFKAAIDGKVSVFP 180 Query: 305 FEFSSITGHGIPQILECLHDKIFSIRGE 332 SS T G+ ++L + D++ ++ E Sbjct: 181 --VSSATREGLRELLFAVADRLDALPDE 206 >gi|17508313|ref|NP_493334.1| hypothetical protein M01E5.2 [Caenorhabditis elegans] gi|3878629|emb|CAB07637.1| C. elegans protein M01E5.2, confirmed by transcript evidence [Caenorhabditis elegans] Length = 358 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 113/325 (34%), Positives = 188/325 (57%), Gaps = 7/325 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +V ++G+GG G +SF R FGGPDGG GG GG V +A+ + L Sbjct: 36 FIDYRRVRCQAGNGGNGMVSFFRGYRKPFGGPDGGDGGHGGHVVFRASRSSKDLSTV--H 93 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 +AQ+GE G ++ G + + VP+GT VF+ DG + I +L+ E I A GG Sbjct: 94 SIVRAQNGEFGRSKSCHGKSADHKEVEVPLGT-VFKADG-NTIFELNNENDMFIAARGGV 151 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG GN + S+ + P+ A G G+E I ++++++A G++G PNAGKS+ L +++RA Sbjct: 152 GGRGNQFYVSNEVRKPFKAEYGGEGEELIYDVEMRVMATAGLVGFPNAGKSSLLRAISRA 211 Query: 183 KPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPK+A YPFTTL+P++G+V E +++ +ADIPG+I+++H G+G FLKH ER L Sbjct: 212 KPKVASYPFTTLHPHIGVVFYEDFEQIAVADIPGLIEDSHLNKGLGISFLKHIERCESLW 271 Query: 242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 +++ ++ Y+ + EL Y L + + +++ID + + + + L++ Sbjct: 272 YVLDYSTGSLTDQYKMLRVELEGYQKGLGDRASTIVINKID-LSGKSPEEEAHHLSSLFP 330 Query: 302 QVP-FEFSSITGHGIPQILECLHDK 325 +P F S+ G+ +LE L ++ Sbjct: 331 NLPVFPVSAQQRIGLEPLLEHLREQ 355 >gi|50539968|ref|NP_001002454.1| GTP-binding protein 10 [Danio rerio] gi|82183255|sp|Q6DHF7|GTPBA_DANRE RecName: Full=GTP-binding protein 10 gi|49900497|gb|AAH76017.1| GTP-binding protein 10 (putative) [Danio rerio] Length = 380 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 93/266 (34%), Positives = 145/266 (54%), Gaps = 34/266 (12%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQAT--SNLNTLIDFR 60 F+D ++Y+R G GG G GDVW+ A + L + D Sbjct: 15 FVDNVRLYVRGGTGGMGLPRLGGHGGDG------------GDVWVVAKKDTRLKQIKDKH 62 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + F A G + GAKGEDV + P G V + G ++ +L++EG ++++A G Sbjct: 63 PDKRFIAGVGSNSSIQALRGAKGEDVEVFAPTGISVTSDHG-RMLGELNREGDKLLVAKG 121 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG + Q+ + N G Q + I L LKLIAD G++G PNAGKS+ L +++ Sbjct: 122 GRGG---------SPQSGFLPNKG---QTRNIRLDLKLIADFGLVGFPNAGKSSLLTALS 169 Query: 181 RAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIA+YPFTT+ P +G ++ + +K+ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 170 HAKPKIANYPFTTIKPEIGKVMYDDHKQVSVADLPGLIEGAHVNKGMGHKFLKHVERTKQ 229 Query: 240 LLHIVS------ALEENVQAAYQCIL 259 L+ +V A + ++A++ +L Sbjct: 230 LMFVVDVCGFQLASKTPFRSAFETVL 255 >gi|156397356|ref|XP_001637857.1| predicted protein [Nematostella vectensis] gi|156224973|gb|EDO45794.1| predicted protein [Nematostella vectensis] Length = 292 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 106/308 (34%), Positives = 158/308 (51%), Gaps = 40/308 (12%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 + D A++Y+R G GG G ++ G GG GGDV + A S L Sbjct: 2 RLCDHARLYVRGGSGGQGSMAH------------AGMGGDGGDVILDARSCLKLPDALNE 49 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 HFK +KR + G +G D+V+ VP GT V +DG I L++ G R+++A GG Sbjct: 50 LPHFKLY---SSLKRRKRGIRGLDLVVPVPPGTTVTTDDG-RFIGKLEELGTRLLVARGG 105 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG ST G G II + LKL AD+G++G PNAGKST L +T+ Sbjct: 106 RGG------NPSTEDWG-----GEKGNACIIRIDLKLAADVGLVGFPNAGKSTLLGMLTQ 154 Query: 182 AKPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 A P +ADYPFTTL P +G++ + + +AD+PG+++ AH G+ +FLKH E T +L Sbjct: 155 ADPTVADYPFTTLRPVIGMLGQHDDSQISVADLPGLVEGAHLNRGMVHKFLKHVEGTRLL 214 Query: 241 LHIVSALEENVQAAY---------QCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 +V + +A+ +L EL Y S L + +++ +S++D +D+ Sbjct: 215 ALVVDVNGFQLSSAHPRRTAFESLCLLLKELVLYESRLTYQPKLLIVSKMDCERADS--- 271 Query: 292 KKNELATQ 299 K EL Q Sbjct: 272 KYQELLEQ 279 >gi|328851744|gb|EGG00895.1| hypothetical protein MELLADRAFT_26220 [Melampsora larici-populina 98AG31] Length = 281 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 101/282 (35%), Positives = 162/282 (57%), Gaps = 12/282 (4%) Query: 14 GDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKG 73 GDGG GG+SF REKF+ GGP GG+GG+GG ++++ + ++++L R + A G G Sbjct: 1 GDGGDGGVSFHREKFVARGGPSGGNGGKGGSIYLRPSEHVHSL--NRIPKILNAPIGSHG 58 Query: 74 MKRNRSGAKGEDVVLTVPVGTQVFE-EDGISLICDLDQEGQRIILAPGGNGGFGNAHFKS 132 + +G GED++L VP+GT V E D + D+ +LA GG GG GN++F Sbjct: 59 AGQWMNGKSGEDLILDVPIGTVVKEIRDQVD---DVQDSPGTFLLAKGGEGGMGNSNFIG 115 Query: 133 STNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFT 192 + P +A G G+ + L+LK +AD+G++G PN+GKST + ++T ++ +IA Y FT Sbjct: 116 NQTVLPRFATKGKKGEVYKLELELKTLADVGLVGFPNSGKSTLIHTLTNSRSEIAPYEFT 175 Query: 193 TLYPNLG---IVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 TL+P +G I +G + + PG++ A G+G FL+H ER+ +L+ +V L Sbjct: 176 TLHPQIGTLIIYTDGTWDTGDQSHCPGLLPKASMNVGLGHAFLRHIERSRILVVVVDILA 235 Query: 249 ENVQAA--YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT 288 E + + ++ EL Y S L ++ IV ++ D S T Sbjct: 236 ELDKPCRDVEMLMKELEEYQSGLSGRVMIVVANKADLSTSST 277 >gi|331004823|ref|ZP_08328241.1| GTP-binding protein Obg [gamma proteobacterium IMCC1989] gi|330421354|gb|EGG95602.1| GTP-binding protein Obg [gamma proteobacterium IMCC1989] Length = 166 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 79/166 (47%), Positives = 121/166 (72%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +G+GG+G +SFRREK+I GGPDGG GG GG V++ +LNTL+D+R Sbjct: 1 MKFVDEAAISVYAGNGGSGCLSFRREKYIAKGGPDGGDGGDGGSVYLVGDGDLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ ++A++G G +N +GAKG+D++L VPVGT VF+ + L+ D+ ++ QR+++A Sbjct: 61 YQPKYRAKNGGSGRGQNCAGAKGDDLILRVPVGTSVFDVETEELLGDITEDKQRLLVAQA 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIG 166 G G GN FKSS N+AP +PG G+ + + L+LK++AD+G++G Sbjct: 121 GFHGLGNTRFKSSVNRAPRQTSPGSEGEHRELKLELKVLADVGLLG 166 >gi|241999190|ref|XP_002434238.1| GTP-binding protein, putative [Ixodes scapularis] gi|215495997|gb|EEC05638.1| GTP-binding protein, putative [Ixodes scapularis] Length = 371 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 114/313 (36%), Positives = 166/313 (53%), Gaps = 40/313 (12%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSN--LNTLIDF 59 +FLD+ ++ +R G+GG G F GG GG +++QA L +I Sbjct: 19 RFLDKLRLNVRGGNGGTGLPRFGG------------VGGEGGSIYVQAKDKVELKDIITK 66 Query: 60 RYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAP 119 + KA HG G G +VV+ VPVG VF G LI DL + G +++ Sbjct: 67 YPDKTIKAGHGGNSKSTQILGPDGHNVVVNVPVGVSVFNGFG-HLIGDLIKPGDKVLAVK 125 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG F G GQ +I L LKLIAD+G +G PNAGKST L ++ Sbjct: 126 GGKGGNPATDFH------------GTKGQTDVITLHLKLIADVGFVGFPNAGKSTLLRAL 173 Query: 180 TRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 +RA PK+A+YPFTT+ PN+GI++ E +++ LAD+PG+I+ AH+ G+G FL+H ERT Sbjct: 174 SRAVPKVANYPFTTIRPNIGIMEYEDHRQISLADLPGLIEGAHRNFGLGHNFLRHVERTS 233 Query: 239 VLLHIVSA----LEE--NVQAAYQCILD---ELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 +LL IV L E + A++ ++ EL Y L +K I+ ++++DT D+ Sbjct: 234 MLLFIVDVNGFQLNERSKFRNAFETVMSLNKELELYKEALLEKPAILAVNKMDTDDA--- 290 Query: 290 ARKKNELATQCGQ 302 K EL G+ Sbjct: 291 KEKYEELLESLGK 303 >gi|325181120|emb|CCA15535.1| GTPase putative [Albugo laibachii Nc14] Length = 499 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 109/311 (35%), Positives = 157/311 (50%), Gaps = 37/311 (11%) Query: 2 KFLDEAKVYIRSGDGGAGGISFR-REKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 +F+D ++ G GG G SF + F + P GG GG GG V IQA S + L Sbjct: 149 RFVDRIRIKAAGGYGGNGCCSFNAKNSFTK--RPSGGHGGAGGAVIIQADSAVQDLASST 206 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGT-----------------QVFEEDGIS 103 + HFK G+ G +G G + VP GT VFE + Sbjct: 207 H--HFKGGSGQNGKPNEGAGRCGSACIFRVPCGTIVKKVTREEIETECGDFDVFER--LE 262 Query: 104 LICDLDQEGQRIILAPGGNGGFGNAHFKSST-------NQAPYYANPGILGQEKIIWLKL 156 I DLD+ G + + A GG G GN S T N+ N G G L+L Sbjct: 263 SIYDLDRHGSQFVAAEGGKPGLGNRVLLSRTTTFGTLKNKMDEGKNIGQPGTSNHYELEL 322 Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIP 214 K+IAD+G++G PNAGKST L+ ++RA PK+A YPFTTL+P +GIV+ + +K +ADIP Sbjct: 323 KIIADVGLVGYPNAGKSTLLSRLSRASPKVAPYPFTTLHPFVGIVEFPDCFK-LSVADIP 381 Query: 215 GIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---ELSAYNSELRK 271 G+I AH+ G+G FL+H ERT +LL+++ A + Q + EL Y + Sbjct: 382 GLIDGAHRNVGLGHDFLRHIERTKILLYVLDASSSEERDPLQDLFHLQRELELYRPSMTA 441 Query: 272 KIEIVGLSQID 282 + ++ +++D Sbjct: 442 RPSLIVANKMD 452 >gi|195339196|ref|XP_002036206.1| GM12999 [Drosophila sechellia] gi|194130086|gb|EDW52129.1| GM12999 [Drosophila sechellia] Length = 381 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 112/325 (34%), Positives = 172/325 (52%), Gaps = 15/325 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D ++ G GG G +SF + E GPDGG GG GG V QA++ D R Sbjct: 52 FSDAKRIRAIGGKGGDGCVSFLQLWCNERAGPDGGDGGHGGHVVFQASN------DVRNF 105 Query: 63 QH----FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 H KA+ GE G ++ G + V+ VP+GT + G ++ DL Q + A Sbjct: 106 NHVGSILKAEEGEPGSSKDCHGKNAKHSVIKVPIGTVIRNAQG-QIVGDLGQADLMFVAA 164 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GN F + +P + G G++ L+L+ +AD+G+IG PNAGKST L + Sbjct: 165 RGGAGGKGNRFFTTDKETSPKVSEYGPKGEDLSYTLELRSMADVGLIGYPNAGKSTLLNA 224 Query: 179 VTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 +TRAKPK+A Y FTTL P+LG V+ + + + +AD+PG++ NAH+ G+G +FLKH ER Sbjct: 225 LTRAKPKVAPYAFTTLRPHLGTVQYDDHVQLTIADLPGLVPNAHRNKGLGIQFLKHAERC 284 Query: 238 HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +LL ++ A Y+ ++ EL + L + ++V +++D + EL Sbjct: 285 TLLLFVLDASAPEPWKHYEQLMHELRQFGGRLASRPQLVVANKLDVEEGQN---NFEELQ 341 Query: 298 TQCGQVPFEFSSITGHGIPQILECL 322 + S+ GH + Q+L + Sbjct: 342 RRLQNPVLGISAKMGHNLGQLLNSI 366 >gi|307105636|gb|EFN53884.1| hypothetical protein CHLNCDRAFT_25193 [Chlorella variabilis] Length = 287 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 95/247 (38%), Positives = 147/247 (59%), Gaps = 6/247 (2%) Query: 44 DVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGIS 103 +V ++A +N+ +L R Q +KA G G K+ + G G D V+ VPVGT + Sbjct: 35 NVVVRAVANMKSLAGVR--QLYKAPPGLHGTKQRQHGRAGRDAVVLVPVGTVQDPQQQYQ 92 Query: 104 LICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQ-APYYANPGILGQEKIIWLKLKLIADI 162 L+ DL ++GQ ++ A GG GG GNA K++ ++ AP G+ G+E + L+LKL+AD+ Sbjct: 93 LLADLVEDGQEVVAARGGRGGRGNAGLKATPSRPAPAEPGQGLPGEEVRLLLELKLLADV 152 Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI---VKEGYKEFILADIPGIIKN 219 G++GLP+AGKST L +T A P++ DY FTTL P LG+ + ++ADIPG+I+ Sbjct: 153 GLVGLPSAGKSTLLRGLTAATPRVGDYAFTTLSPQLGVWTAPDPAEEPIVVADIPGLIEG 212 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 AHQ G+G FL+H ERT V+ +++ N + + EL+AY L + +V + Sbjct: 213 AHQNRGLGHSFLRHIERTKVIAYVLDCQSGNGSESLDTLQRELAAYAPHLSRLPALVLAN 272 Query: 280 QIDTVDS 286 ++D V S Sbjct: 273 KLDAVRS 279 >gi|195385721|ref|XP_002051553.1| GJ11528 [Drosophila virilis] gi|194148010|gb|EDW63708.1| GJ11528 [Drosophila virilis] Length = 376 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 112/323 (34%), Positives = 175/323 (54%), Gaps = 10/323 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D +V G GG G +SF + E GPDGG GG GG V QA+ N + +F + Sbjct: 44 FSDAKRVRTVGGKGGDGCVSFLQLWCNERAGPDGGDGGNGGHVIFQAS---NDVRNFNHV 100 Query: 63 QH-FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 +A G G ++ G + V+ VP+GT + +G+ ++ DL + A GG Sbjct: 101 NSVLRANEGGIGSAKDCHGKNAKHTVIKVPIGTVIRNAEGL-IVADLANADLMFVAARGG 159 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN F + T +P G G++ L+L+ +A++G+IG PNAGKST L ++TR Sbjct: 160 AGGKGNRFFTTDTETSPKVCEYGPPGEDCSYILELRSMAEVGLIGFPNAGKSTLLNALTR 219 Query: 182 AKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPK+A Y FTTL P+LG V+ + + + +AD+PG++ +AH+ G+G +FLKH ER +L Sbjct: 220 AKPKVAPYAFTTLRPHLGTVQYDDHVQLTIADLPGLVPDAHRNRGLGIQFLKHAERCTLL 279 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L ++ A N Y ++ EL + L ++ ++V +++D S A +L Q Sbjct: 280 LFVLDASSPNPWMQYNQLMHELEKFGGSLAQRPQLVVANKMDVPAS---AGNFEQLQQQL 336 Query: 301 GQVPFE-FSSITGHGIPQILECL 322 Q S+ GH + Q+L + Sbjct: 337 RQPNLLGISAKMGHNLAQLLSSI 359 >gi|224004001|ref|XP_002291672.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973448|gb|EED91779.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 576 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 117/355 (32%), Positives = 173/355 (48%), Gaps = 75/355 (21%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDF-RY 61 F DEA +YIR+G GG G ++++ + G PDGG+GG+GG+V ++ +LNTL RY Sbjct: 144 FFDEATIYIRAGSGGQGSSTYKKGVNSQNGPPDGGNGGKGGNVVLKLDDSLNTLAGLARY 203 Query: 62 QQ-----------------------------------HFKAQHGEKGMKRNRSGAKGEDV 86 F+A++G G ++ + G G+D+ Sbjct: 204 AWKPNSFGGGGGAKRRGGGGSGGNASGGDASTTTRVLSFRAENGADGARQCKQGRNGKDI 263 Query: 87 VLTVPVGTQVFEE---------DGISLICD---LDQEGQRIILAPGGNGGFGNAHFKSST 134 V+ VP GT V +E DG D + +++A GG GG G+A + Sbjct: 264 VVRVPPGTVVQQEIMDPNANSEDGTPTYIDQGTITHANPTLVIATGGQGGEGSALHSTLQ 323 Query: 135 NQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL 194 P G+ K + L LK++AD+ ++ +PNAGKST L+ VTRAKPKIADYPFTT+ Sbjct: 324 RGVRRPRTPPQGGERKRLKLTLKVVADVALVAVPNAGKSTLLSKVTRAKPKIADYPFTTV 383 Query: 195 YPNLG--------------------------IVKEGYKEFILADIPGIIKNAHQGAGIGD 228 PNLG I K IL D+PG+I A +G G+G Sbjct: 384 VPNLGVWVPSNALDAFDDEEEYYEYDVDGNPIASSKSKSLILCDVPGLIAGASEGVGLGH 443 Query: 229 RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS-ELRKKIEIVGLSQID 282 FL+H ER HV+LH++ A V Y I EL Y + +L + ++V ++++D Sbjct: 444 AFLRHVERCHVILHLLDATSNKVLEEYAMINRELLNYGTGKLARMPQVVVVNKLD 498 >gi|195577574|ref|XP_002078644.1| GD22413 [Drosophila simulans] gi|194190653|gb|EDX04229.1| GD22413 [Drosophila simulans] Length = 381 Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 112/325 (34%), Positives = 172/325 (52%), Gaps = 15/325 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D +V G GG G +SF + E GPDGG GG GG V QA++ D R Sbjct: 52 FSDAKRVRAVGGKGGDGCVSFLQLWCNERAGPDGGDGGHGGHVVFQASN------DVRNF 105 Query: 63 QH----FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 H KA+ GE G ++ G + V+ VP+GT + G ++ DL Q + A Sbjct: 106 NHVGSILKAEEGEPGSSKDCHGKNAKHSVIKVPIGTVIRNAQG-QIVGDLGQADLMFVAA 164 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GN F + +P + G G++ L+L+ +AD+G+IG PNAGKST L + Sbjct: 165 RGGAGGKGNRFFTTDKETSPKVSEYGPKGEDLSYTLELRSMADVGLIGYPNAGKSTLLNA 224 Query: 179 VTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 +TRAKPK+A Y FTTL P+LG V+ + + + +AD+PG++ +AH+ G+G +FLKH ER Sbjct: 225 LTRAKPKVAPYAFTTLRPHLGTVQYDDHVQLTIADLPGLVPDAHRNKGLGIQFLKHAERC 284 Query: 238 HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +LL ++ A Y+ ++ EL + L + ++V +++D + EL Sbjct: 285 TLLLFVLDASAPEPWKHYEQLMHELRQFGGRLASRPQLVVANKLDVEEGQN---NFEELQ 341 Query: 298 TQCGQVPFEFSSITGHGIPQILECL 322 + S+ GH + Q+L + Sbjct: 342 RRLQNPVLGISAKMGHNLGQLLNSI 366 >gi|20129375|ref|NP_609218.1| CG13390 [Drosophila melanogaster] gi|7297396|gb|AAF52655.1| CG13390 [Drosophila melanogaster] Length = 381 Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 111/325 (34%), Positives = 172/325 (52%), Gaps = 15/325 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D ++ G GG G +SF + E GPDGG GG GG V QA++ D R Sbjct: 52 FSDAKRIRAIGGKGGDGCVSFLQLWCNERAGPDGGDGGHGGHVVFQASN------DVRNF 105 Query: 63 QH----FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 H KA+ GE G ++ G + V+ VP+GT + G ++ DL Q + A Sbjct: 106 NHVGSVLKAEEGEPGSSKDCHGKNAKHSVIKVPIGTVIRNAQG-QIVGDLGQADLMFVAA 164 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GN F + +P + G G++ L+L+ +AD+G+IG PNAGKST L + Sbjct: 165 RGGAGGKGNRFFTTDKETSPKVSEYGPRGEDLSYTLELRSMADVGLIGYPNAGKSTLLNA 224 Query: 179 VTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 +TRAKPK+A Y FTTL P+LG V+ + + + +AD+PG++ +AH+ G+G +FLKH ER Sbjct: 225 LTRAKPKVAPYAFTTLRPHLGTVQYDDHVQLTIADLPGLVPDAHRNKGLGIQFLKHAERC 284 Query: 238 HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +LL ++ A Y+ ++ EL + L + ++V +++D + EL Sbjct: 285 TLLLFVLDASAPEPWTHYEQLMHELRQFGGRLASRPQLVVANKLDVEEGQN---NFEELQ 341 Query: 298 TQCGQVPFEFSSITGHGIPQILECL 322 + S+ GH + Q+L + Sbjct: 342 RRLQNPVLGISAKMGHNLGQLLNSI 366 >gi|255017674|ref|ZP_05289800.1| GTPase ObgE [Listeria monocytogenes FSL F2-515] Length = 295 Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 78/196 (39%), Positives = 126/196 (64%), Gaps = 9/196 (4%) Query: 137 APYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP 196 AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ V+ A+PKIA Y FTT+ P Sbjct: 2 APELSENGEPGQERNVQLELKVLADVGLVGFPSVGKSTLLSVVSAARPKIAAYHFTTIVP 61 Query: 197 NLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQ- 252 NLG+V G + F++AD+PG+I+ A QG G+G +FL+H ERT V++H++ S E V Sbjct: 62 NLGMVDAGDGRSFVMADLPGLIEGASQGVGLGHQFLRHIERTRVIVHVIDMSGSEGRVPY 121 Query: 253 AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQ-VP-FEFSSI 310 Y I +EL YN L ++ +I+ +++D D++ NE T+ + +P F S++ Sbjct: 122 EDYMAINNELEQYNLRLMERPQIIVANKMDMPDAE---ENLNEFKTKIAEDIPVFPISAV 178 Query: 311 TGHGIPQILECLHDKI 326 T G+ ++L + DK+ Sbjct: 179 TKTGLRELLLAIADKL 194 >gi|51092027|gb|AAT94427.1| RE71283p [Drosophila melanogaster] Length = 382 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 111/325 (34%), Positives = 172/325 (52%), Gaps = 15/325 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D ++ G GG G +SF + E GPDGG GG GG V QA++ D R Sbjct: 53 FSDAKRIRAIGGKGGDGCVSFLQLWCNERAGPDGGDGGHGGHVVFQASN------DVRNF 106 Query: 63 QH----FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 H KA+ GE G ++ G + V+ VP+GT + G ++ DL Q + A Sbjct: 107 NHVGSVLKAEEGEPGSSKDCHGKNAKHSVIKVPIGTVIRNAQG-QIVGDLGQADLMFVAA 165 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GN F + +P + G G++ L+L+ +AD+G+IG PNAGKST L + Sbjct: 166 RGGAGGKGNRFFTTDKETSPKVSEYGPRGEDLSYTLELRSMADVGLIGYPNAGKSTLLNA 225 Query: 179 VTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 +TRAKPK+A Y FTTL P+LG V+ + + + +AD+PG++ +AH+ G+G +FLKH ER Sbjct: 226 LTRAKPKVAPYAFTTLRPHLGTVQYDDHVQLTIADLPGLVPDAHRNKGLGIQFLKHAERC 285 Query: 238 HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +LL ++ A Y+ ++ EL + L + ++V +++D + EL Sbjct: 286 TLLLFVLDASAPEPWTHYEQLMHELRQFGGRLASRPQLVVANKLDVEEGQN---NFEELQ 342 Query: 298 TQCGQVPFEFSSITGHGIPQILECL 322 + S+ GH + Q+L + Sbjct: 343 RRLQNPVLGISAKMGHNLGQLLNSI 367 >gi|257875794|ref|ZP_05655447.1| GTP-binding protein [Enterococcus casseliflavus EC20] gi|257809960|gb|EEV38780.1| GTP-binding protein [Enterococcus casseliflavus EC20] Length = 321 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 83/209 (39%), Positives = 125/209 (59%), Gaps = 11/209 (5%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N F S N AP A G GQE+ I L+LK++AD+G++G P+ GKST L+ ++ A+PKI Sbjct: 12 NIRFASPKNPAPELAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVISSARPKI 71 Query: 187 ADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV- 244 Y FTTL PNLG+V + F +AD+PG+I+ A QG G+G +FL+H ERT V+LH++ Sbjct: 72 GAYHFTTLVPNLGMVTTTDGRSFAVADLPGLIEGASQGVGLGTQFLRHIERTRVILHVID 131 Query: 245 -SALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELATQCG 301 S +E + Y I +ELS +N L ++ +I+ +++D D+ + LA K +LA + Sbjct: 132 MSGMEGRDPYEDYLSINNELSTHNLRLLERPQIIVANKMDMPDAEENLALFKEQLAKEKA 191 Query: 302 Q------VPFEFSSITGHGIPQILECLHD 324 + F S +T GI +L D Sbjct: 192 DEFADEPMIFPISGVTRKGIDALLNATAD 220 >gi|195155619|ref|XP_002018699.1| GL25811 [Drosophila persimilis] gi|194114852|gb|EDW36895.1| GL25811 [Drosophila persimilis] Length = 382 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 112/325 (34%), Positives = 171/325 (52%), Gaps = 15/325 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D +V G GG G +SF + E GPDGG GG GG V QA++ D R Sbjct: 53 FSDAKRVRAVGGKGGDGCVSFLQLWCNERAGPDGGDGGNGGHVVFQASN------DVRNF 106 Query: 63 QH----FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 H +A+ GE+G ++ G + V+ VP+GT + G+ ++ DL + A Sbjct: 107 NHVGSVLRAEEGERGNAKDCHGKNAKHAVIKVPIGTIIRNAQGL-IVGDLGHADLMFVAA 165 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GN F + +P G G++ ++L+ +AD+G+IG PNAGKST L + Sbjct: 166 RGGAGGKGNRFFTTDKETSPKVCEYGPTGEDISYTIELRSMADVGLIGYPNAGKSTLLNA 225 Query: 179 VTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 +TRAKPK+A Y FTTL P+LG V+ + + +AD+PG++ +AH G+G +FLKH ER Sbjct: 226 LTRAKPKVAPYAFTTLRPHLGTVQYDDLVQITIADLPGLVPDAHLNKGLGIQFLKHAERC 285 Query: 238 HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +LL ++ A Y+ ++ EL + L + ++V ++ID DS A EL Sbjct: 286 TLLLFVLDASAPEPWTHYEQLMHELRQFGGSLASRPQLVVANKIDMEDS---AANFEELQ 342 Query: 298 TQCGQVPFEFSSITGHGIPQILECL 322 + S+ G + Q+L + Sbjct: 343 RRLQNPVLGISAKMGQNLGQLLSSI 367 >gi|125987345|ref|XP_001357435.1| GA12249 [Drosophila pseudoobscura pseudoobscura] gi|54645766|gb|EAL34504.1| GA12249 [Drosophila pseudoobscura pseudoobscura] Length = 382 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 112/325 (34%), Positives = 171/325 (52%), Gaps = 15/325 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D +V G GG G +SF + E GPDGG GG GG V QA++ D R Sbjct: 53 FSDAKRVRAVGGKGGDGCVSFLQLWCNERAGPDGGDGGNGGHVVFQASN------DVRNF 106 Query: 63 QH----FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 H +A+ GE+G ++ G + V+ VP+GT + G+ ++ DL + A Sbjct: 107 NHVGSVLRAEEGERGNAKDCHGKNAKHAVIKVPIGTIIRNAQGL-IVGDLGHADLMFVAA 165 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GN F + +P G G++ ++L+ +AD+G+IG PNAGKST L + Sbjct: 166 RGGAGGKGNRFFTTDKETSPKVCEYGPTGEDISYTIELRSMADVGLIGYPNAGKSTLLNA 225 Query: 179 VTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 +TRAKPK+A Y FTTL P+LG V+ + + +AD+PG++ +AH G+G +FLKH ER Sbjct: 226 LTRAKPKVAPYAFTTLRPHLGTVQYDDLVQITIADLPGLVPDAHLNKGLGIQFLKHAERC 285 Query: 238 HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 +LL ++ A Y+ ++ EL + L + ++V ++ID DS A EL Sbjct: 286 TLLLFVLDASAPEPWTHYEQLMHELRQFGGSLASRPQLVVANKIDMEDS---AANFEELQ 342 Query: 298 TQCGQVPFEFSSITGHGIPQILECL 322 + S+ G + Q+L + Sbjct: 343 RRLQNPVLGISAKMGQNLGQLLSSI 367 >gi|47229332|emb|CAG04084.1| unnamed protein product [Tetraodon nigroviridis] Length = 381 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 87/233 (37%), Positives = 138/233 (59%), Gaps = 6/233 (2%) Query: 88 LTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILG 147 L VP+GT V +E G + + DL Q GQ + A GG GG GN F ++ N+AP + PG G Sbjct: 139 LKVPLGT-VIKEQGRT-VTDLSQHGQEFMAASGGAGGKGNRFFLTNENRAPMTSTPGAQG 196 Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYK 206 QE+++ L+L+ +A G++G PNAGKS+ L +++ AKP +A YPFTTL P++GIV + Sbjct: 197 QERLLHLELRTMAHAGLVGFPNAGKSSLLRAISNAKPAVAAYPFTTLKPHVGIVNYRDHV 256 Query: 207 EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN 266 + +ADIPGII+ AH G+G FL+H ER LL ++ + A Q + EL Y Sbjct: 257 QVAVADIPGIIRGAHLNRGLGLSFLRHIERCRFLLFVLDMSSPDPWAQLQDLHHELDHYE 316 Query: 267 SELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 +L ++ + + +++D D+ + L T+ +P S++TG +++ Sbjct: 317 PDLSQRPQAIIANKMDLPDARSKLEALRSLVTR-RVIP--VSAVTGQNTEELI 366 >gi|219558438|ref|ZP_03537514.1| GTPase ObgE [Mycobacterium tuberculosis T17] gi|289570594|ref|ZP_06450821.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis T17] gi|289544348|gb|EFD47996.1| GTP1/obg-family GTP-binding protein obg [Mycobacterium tuberculosis T17] Length = 482 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 119/333 (35%), Positives = 172/333 (51%), Gaps = 31/333 (9%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ R+G GG G S REKF GGPDGG+GGRGG + ++TL+DF + Sbjct: 3 RFVDRVVIHTRAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDFHF 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 + H A G+ GM NR GA G D+ + VP GT V +E+G L+ DL G R A GG Sbjct: 63 RPHLTAASGKHGMGNNRDGAAGADLEVKVPEGTVVLDENG-RLLADLVGAGTRFEAAAGG 121 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA S +AP +A G GQ + + L+LK +AD+G++G P+AGKS+ +++++ Sbjct: 122 RGGLGNAALASRVRKAPGFALLGEKGQSRDLTLELKTVADVGLVGFPSAGKSSLVSAISA 181 Query: 182 AKPKIADYPFTTLYPNLGI----------VKEGYKEFILADIPGIIKNAHQGAGIGDRFL 231 AKPKIADYPFTTL PNLG V+ + I IPG + G F Sbjct: 182 AKPKIADYPFTTLVPNLGCGLGWRGTRFTVRRRCRGLIPGRIPGPVV-------WGWTFC 234 Query: 232 KHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNS---------ELRKKIEIVGL 278 + + L+H+V + + + EL+ Y +L + V L Sbjct: 235 RTSSACAELVHVVDCATAEPGRDPISDIDALETELACYTPTLQGDAALGDLAARPRAVVL 294 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSIT 311 ++ID ++ LA + Q G F S+ T Sbjct: 295 NKIDVPEARELAEFVRDDIAQRGWPVFCVSTAT 327 >gi|225711586|gb|ACO11639.1| GTP-binding protein 10 [Caligus rogercresseyi] Length = 378 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 95/263 (36%), Positives = 143/263 (54%), Gaps = 32/263 (12%) Query: 43 GDVWIQATSNLNTLID------FRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 G V+I +S + +L +Q A G+ + G G+D+ L VP G QV Sbjct: 27 GSVYISPSSKVESLASVYTTNFIEKKQRLLAAQGDHASRSLVLGQPGKDIHLEVPTGIQV 86 Query: 97 FEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKL 156 +E G L+ DLD E + +A A + PG+ + I L L Sbjct: 87 LDEGG-RLLKDLDSEELTVRVA---------AGGNGGGPTNGWMGQPGV---SRHIRLDL 133 Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV---KEGYKEFILADI 213 K+IAD+G +G PNAGKST L +++RAKP+IA YPFTT+ PNLG + K+G K +LAD+ Sbjct: 134 KIIADVGFVGFPNAGKSTLLRALSRAKPRIASYPFTTIKPNLGEIFYSKDGRK-VLLADL 192 Query: 214 PGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SALE----ENVQAAYQCIL---DELSA 264 PG+I+ A G+G RFLKH ERT +LL +V + E ++ +Q I+ EL Sbjct: 193 PGLIEGASYNVGMGHRFLKHVERTRLLLFVVDINGFELRKGSTHRSPFQTIVLLNKELEL 252 Query: 265 YNSELRKKIEIVGLSQIDTVDSD 287 YN++L +K ++ ++++DT S+ Sbjct: 253 YNADLIRKPCVLVVNKMDTPGSE 275 >gi|313618798|gb|EFR90694.1| Spo0B-associated GTP-binding protein [Listeria innocua FSL S4-378] Length = 302 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 78/204 (38%), Positives = 127/204 (62%), Gaps = 9/204 (4%) Query: 129 HFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIAD 188 F + N AP + G GQE+ + L+LK++AD+G++G + GKST L+ V+ A+PKIA Sbjct: 1 RFATPANPAPELSENGEPGQERNVQLELKVLADVGLVGXXSVGKSTLLSVVSAARPKIAA 60 Query: 189 YPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--S 245 Y FTT+ PNLG+V G + F++AD+PG+I+ A QG G+G +FL+H ERT V++H++ S Sbjct: 61 YHFTTIVPNLGMVDAGDGRSFVMADLPGLIEGASQGVGLGHQFLRHIERTRVIVHVIDMS 120 Query: 246 ALEENVQ-AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQ-V 303 E V Y I +EL YN L ++ +I+ +++D D++ E T+ + + Sbjct: 121 GSEGRVPYEDYMAINNELEQYNLRLMERPQIIVANKMDMPDAE---ENLKEFKTKIAEDI 177 Query: 304 P-FEFSSITGHGIPQILECLHDKI 326 P F S++T G+ ++L + DK+ Sbjct: 178 PVFPISAVTKTGLRELLLAIADKL 201 >gi|195433974|ref|XP_002064981.1| GK15220 [Drosophila willistoni] gi|194161066|gb|EDW75967.1| GK15220 [Drosophila willistoni] Length = 384 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 85/240 (35%), Positives = 128/240 (53%), Gaps = 22/240 (9%) Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + A GE K + G +G+D + VPVG QV++E LI DL++ ++A GG Sbjct: 74 KRISASSGEDSSKVSIFGKRGQDQRIEVPVGVQVYDEQQRKLIADLNEHDATCMVAAGGT 133 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 G +F G G + + L LKLIAD+G++G PNAGKST L ++ A Sbjct: 134 AGCVGNNFL------------GRPGDNRTVSLDLKLIADVGLVGFPNAGKSTLLKGISNA 181 Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPKIA YPFTT+ P +G + + +AD+PG+I+ AH G+G +FLKH ERT +LL Sbjct: 182 KPKIAAYPFTTIRPQVGTIDYSDLRSISIADLPGLIEGAHANFGMGHKFLKHIERTRLLL 241 Query: 242 HIVSALEENVQAAY---QCILD------ELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 +V + + C+ + EL Y+ L K ++ L++ID S+ L ++ Sbjct: 242 FMVDIFGFQLSPRHPHRDCLTNIYSLNKELELYDPSLLDKPCVLLLNKIDKEGSEDLLKE 301 >gi|125535355|gb|EAY81903.1| hypothetical protein OsI_37081 [Oryza sativa Indica Group] Length = 528 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 87/236 (36%), Positives = 132/236 (55%), Gaps = 19/236 (8%) Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHF-------KSSTNQAPYYANPGILGQEKIIWLKLK 157 + ++ + GQR+I+A GG GG GNA K+ + + G G E + L+LK Sbjct: 278 VAEMTKPGQRLIIARGGEGGLGNACILKEMWLSKAHKEEEMASLSTGHPGTETYLILELK 337 Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGI 216 IAD+G++G+PNAGKST L++++RA+P+IADY FTTL PN+G + E Y +ADIPG+ Sbjct: 338 SIADVGLVGMPNAGKSTLLSTLSRARPEIADYAFTTLRPNIGSLTYEDYFSVKVADIPGL 397 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-----EENVQAAYQC--ILDELSAYNSEL 269 IK AH+ G+G FL+H ERT VL +++ + V Q ++ EL Y L Sbjct: 398 IKGAHENRGLGHAFLRHIERTKVLAYVLDLAATLNGRKGVPPWEQLRDLVVELEHYQEGL 457 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHD 324 K+ ++ ++ID +D + EL + VP F +I G+P + L D Sbjct: 458 TKRPSLIVANKIDEEGADEMY---EELKKRVQGVPMFPICAILQEGVPDLRVGLRD 510 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 4/95 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR-Y 61 +D ++ + GDGG G IS RR + G PDGG+GGRGGDV ++ + ++ DF Sbjct: 46 MVDRFRLRAKGGDGGNGCISLRRSRSDRQGKPDGGNGGRGGDVILECS---RSVWDFSGL 102 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 Q H KA G G+ +N+ G +G D + VPVGT + Sbjct: 103 QHHMKASRGANGVSKNQIGTRGSDKIAQVPVGTVI 137 >gi|302847269|ref|XP_002955169.1| hypothetical protein VOLCADRAFT_96071 [Volvox carteri f. nagariensis] gi|300259461|gb|EFJ43688.1| hypothetical protein VOLCADRAFT_96071 [Volvox carteri f. nagariensis] Length = 699 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 81/219 (36%), Positives = 122/219 (55%), Gaps = 15/219 (6%) Query: 70 GEKGMKRNRSGAKGEDVVLTVPV--GTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGN 127 G G K+N+ K L +PV GT V +L+ +L Q GQR+ ++ G Sbjct: 211 GSGGPKKNKEIKKALTPSLEIPVPPGTVVKRRGTGALLGELLQPGQRLTVSKG------- 263 Query: 128 AHFKSSTNQAPYYANP--GILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPK 185 + + P + + G G + + L L+++AD+G++G PNAGKS+ L ++TRA P Sbjct: 264 --VEVVDVEDPGWVSDSRGQPGHQLTLTLTLRVVADVGLVGFPNAGKSSLLKALTRASPA 321 Query: 186 IADYPFTTLYPNLGIVKE--GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHI 243 IA YPFTTL PNLG++ G +LAD+PG+I+ AH+G G+G FL+H RT LLH+ Sbjct: 322 IAPYPFTTLMPNLGVLSAGGGATRAVLADLPGLIEGAHKGRGLGRNFLRHLRRTRALLHV 381 Query: 244 VSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 V A + Y + +EL YN E + +V L++ D Sbjct: 382 VDASGPDPATDYYAVREELRMYNPEYCARPHVVALNKTD 420 >gi|213401503|ref|XP_002171524.1| GTP-binding protein [Schizosaccharomyces japonicus yFS275] gi|211999571|gb|EEB05231.1| GTP-binding protein [Schizosaccharomyces japonicus yFS275] Length = 363 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 90/291 (30%), Positives = 142/291 (48%), Gaps = 59/291 (20%) Query: 60 RYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE--------------------- 98 R ++A++G+ G NR G G+ V+L VPVGT + E Sbjct: 31 RNSHAYQAKNGQNGKGDNRHGKAGKSVLLRVPVGTVMREIQFSQKESEPESLQWVLYPTL 90 Query: 99 --ED--------------------------GISLICDLDQEGQRI-ILAPGGNGGFGNAH 129 ED L D D+E + ++ GG GG GN + Sbjct: 91 QAEDVEHSSFFQKAKARAKGLVPLRKTKTTDTPLCIDFDKESTKPQLVCKGGKGGLGNIY 150 Query: 130 FKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADY 189 F S N +P +A G+ G+EK+ L+LK I DIG++G+PNAGKST L ++T AK I ++ Sbjct: 151 FLSEENWSPKFATKGLRGEEKVFELELKTICDIGLVGMPNAGKSTLLNTLTEAKSPIGNW 210 Query: 190 PFTTLYPNLGIVK------EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH---VL 240 FTTL P+LG ++ ++ +AD+PG+I+ A +G G+G FL+H ER+ +L Sbjct: 211 EFTTLKPHLGTLRYFDHDLNTSQKLQIADLPGLIEGASKGKGLGLNFLRHVERSRALCML 270 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 + I + A++ + EL YN++L + +V ++ D + D R Sbjct: 271 IDISPMARVTGETAFELLWKELCTYNAQLVHRPVLVLANKADIAEEDAFYR 321 >gi|270007653|gb|EFA04101.1| hypothetical protein TcasGA2_TC014336 [Tribolium castaneum] Length = 361 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 101/285 (35%), Positives = 148/285 (51%), Gaps = 37/285 (12%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D KV++ G GG G F GG+GGDV + N++ F+ Sbjct: 24 FRDSLKVFVSGGTGGNGLPKFGG------------VGGQGGDVIAVGSDNISLQDVFKRN 71 Query: 63 QH--FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q + A+ G G GE + VPVG V E G I +++ +G+ ++LA G Sbjct: 72 QSKSYTAKAGRHSSHNFILGPPGESLKFEVPVGVTVITELGKK-IGEINNKGEELLLAKG 130 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG P G GQ + LKLIAD+G++G PNAGKST L +++ Sbjct: 131 GTGG------------NPKNGYLGTKGQAYPVIFDLKLIADVGLVGFPNAGKSTLLKAIS 178 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIA YPFTT+ PN+GI++ + +E +AD+PG+I+ A+ G+G +FLKH ERT + Sbjct: 179 HAKPKIASYPFTTVRPNVGIIQYKDLREISMADLPGLIEGAYANKGMGHKFLKHVERTKL 238 Query: 240 LLHIV--SALEENVQAAYQCILD-------ELSAYNSELRKKIEI 275 LL +V + + + Q ++ L+ EL YN +L +K I Sbjct: 239 LLLVVDINGFQLSPQYPHRSCLETVLLLNKELELYNKDLLEKPSI 283 >gi|115486799|ref|NP_001068543.1| Os11g0704300 [Oryza sativa Japonica Group] gi|77552708|gb|ABA95505.1| GTP1/OBG family protein, expressed [Oryza sativa Japonica Group] gi|113645765|dbj|BAF28906.1| Os11g0704300 [Oryza sativa Japonica Group] gi|215740588|dbj|BAG97244.1| unnamed protein product [Oryza sativa Japonica Group] Length = 528 Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 87/236 (36%), Positives = 132/236 (55%), Gaps = 19/236 (8%) Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHF-------KSSTNQAPYYANPGILGQEKIIWLKLK 157 + ++ + GQR+I+A GG GG GNA K+ + + G G E + L+LK Sbjct: 278 VAEMTKPGQRLIIARGGEGGLGNACILKEMWLSKAHKEEEMASLSTGHPGTETYLILELK 337 Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGI 216 IAD+G++G+PNAGKST L++++RA+P+IADY FTTL PN+G + E Y +ADIPG+ Sbjct: 338 SIADVGLVGMPNAGKSTLLSALSRARPEIADYAFTTLRPNIGSLTYEDYFSVKVADIPGL 397 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-----EENVQAAYQC--ILDELSAYNSEL 269 IK AH+ G+G FL+H ERT VL +++ + V Q ++ EL Y L Sbjct: 398 IKGAHENRGLGHAFLRHIERTKVLAYVLDLAATLNGRKGVPPWEQLRDLVVELEHYQEGL 457 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHD 324 K+ ++ ++ID +D + EL + VP F +I G+P + L D Sbjct: 458 TKRPSLIVANKIDEEGADEMY---EELKKRVQGVPMFPICAILQEGVPDLRVGLRD 510 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 4/100 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR-Y 61 +D ++ + GDGG G IS RR + G PDGG+GGRGGDV ++ + ++ DF Sbjct: 46 MVDRFRLRAKGGDGGNGCISLRRSRSDRQGKPDGGNGGRGGDVILECS---RSVWDFSGL 102 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDG 101 Q H KA G G+ +N+ G +G D + VPVGT + +G Sbjct: 103 QHHMKASRGANGVSKNQIGTRGSDKIAQVPVGTVIHLVEG 142 >gi|62733239|gb|AAX95356.1| F22G5.1-related [Oryza sativa Japonica Group] Length = 664 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 87/236 (36%), Positives = 132/236 (55%), Gaps = 19/236 (8%) Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHF-------KSSTNQAPYYANPGILGQEKIIWLKLK 157 + ++ + GQR+I+A GG GG GNA K+ + + G G E + L+LK Sbjct: 278 VAEMTKPGQRLIIARGGEGGLGNACILKEMWLSKAHKEEEMASLSTGHPGTETYLILELK 337 Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGI 216 IAD+G++G+PNAGKST L++++RA+P+IADY FTTL PN+G + E Y +ADIPG+ Sbjct: 338 SIADVGLVGMPNAGKSTLLSALSRARPEIADYAFTTLRPNIGSLTYEDYFSVKVADIPGL 397 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-----EENVQAAYQC--ILDELSAYNSEL 269 IK AH+ G+G FL+H ERT VL +++ + V Q ++ EL Y L Sbjct: 398 IKGAHENRGLGHAFLRHIERTKVLAYVLDLAATLNGRKGVPPWEQLRDLVVELEHYQEGL 457 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHD 324 K+ ++ ++ID +D + EL + VP F +I G+P + L D Sbjct: 458 TKRPSLIVANKIDEEGADEMY---EELKKRVQGVPMFPICAILQEGVPDLRVGLRD 510 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 4/95 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR-Y 61 +D ++ + GDGG G IS RR + G PDGG+GGRGGDV ++ + ++ DF Sbjct: 46 MVDRFRLRAKGGDGGNGCISLRRSRSDRQGKPDGGNGGRGGDVILECS---RSVWDFSGL 102 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 Q H KA G G+ +N+ G +G D + VPVGT + Sbjct: 103 QHHMKASRGANGVSKNQIGTRGSDKIAQVPVGTVI 137 >gi|326504088|dbj|BAK02830.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 517 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 87/236 (36%), Positives = 134/236 (56%), Gaps = 19/236 (8%) Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHF-------KSSTNQAPYYANPGILGQEKIIWLKLK 157 + ++ + GQR+I+A GG GG GNA K + + + G G E + L+LK Sbjct: 267 VAEMTRPGQRLIVAHGGEGGLGNASIGRDVRLSKGNRQEEVACLSTGQPGTESFLVLELK 326 Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGI 216 IAD+G++GLPNAGKST L++++RA+P+IADY FTTL PN+G + + Y +ADIPG+ Sbjct: 327 SIADVGLVGLPNAGKSTLLSALSRARPEIADYAFTTLRPNIGSLTYDDYLSVKVADIPGL 386 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVS-ALEENVQ---AAYQCILD---ELSAYNSEL 269 IK AH+ G+G FL+H ERT VL +++ A N + ++ + D EL Y + Sbjct: 387 IKGAHENRGLGHAFLRHIERTKVLSYVLDLAATLNGRKGIPPWEQLRDLVVELEHYQEGM 446 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHD 324 K+ ++ ++ID +D + EL + VP F +I G+P + L D Sbjct: 447 TKRPSLIVANKIDEEGADVM---YEELKLRVQGVPIFPVCAILQEGVPDLRVGLRD 499 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 4/95 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDF-RY 61 +D ++ R GDGG G IS RR + G PDGG GG GG+V ++ + ++ DF Sbjct: 49 MVDRFRLLARGGDGGNGCISQRRSRSDRQGRPDGGDGGTGGNVILECS---RSVWDFSNL 105 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 Q H KA G G+ + + G +G D V VPVGT + Sbjct: 106 QHHTKAVRGGNGLSKKQIGTRGPDKVAQVPVGTVI 140 >gi|322818632|gb|EFZ25983.1| GTP-binding protein, putative [Trypanosoma cruzi] Length = 450 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 90/238 (37%), Positives = 144/238 (60%), Gaps = 2/238 (0%) Query: 9 VYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ-QHFKA 67 + + SG GG G E EF GP GG+GG GG+V ++ + + L + A Sbjct: 1 MLVSSGAGGDGASVMSHENGNEFAGPGGGNGGNGGNVMLRCSKRIADLSHLKEMGSQITA 60 Query: 68 QHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGN 127 G G R G +G+D++L +PVGT+V + D ++ D+D++G ++L GG GG GN Sbjct: 61 SPGSVGFARTAHGKRGKDLLLELPVGTEVVDLDTNEVVYDVDEDGMELLLLEGGQGGKGN 120 Query: 128 AHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIA 187 A F + + +P + G+ G ++ +LK IAD+G+IG PNAGKS+ L++++ +KP IA Sbjct: 121 AAFANKWHHSPTESTRGLPGNTMLVQFELKTIADVGLIGYPNAGKSSLLSAISTSKPMIA 180 Query: 188 DYPFTTLYPNLGIVKEGYKEFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 Y FTTL P +G++ + Y +AD+PG+I+ A++ G+G +FL+H ERT L ++V Sbjct: 181 PYVFTTLRPYVGVIHDLYGNTCRVADLPGLIEGAYENRGLGHQFLRHVERTQSLAYVV 238 >gi|328718050|ref|XP_001950342.2| PREDICTED: GTP-binding protein 10 homolog isoform 1 [Acyrthosiphon pisum] Length = 407 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 100/272 (36%), Positives = 152/272 (55%), Gaps = 34/272 (12%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPD-GGSGGRGGDVWIQATSNLNTLIDFR 60 KFLD ++++++G GG FG P GG GG+GGDV AT + TL DF Sbjct: 47 KFLDSLRIHVKAGTGG-------------FGFPRYGGEGGKGGDVCFVATEGM-TLKDFL 92 Query: 61 YQ---QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIIL 117 + + +A+ G R G GED + VP G V+++ + LI +L++ +I+ Sbjct: 93 KKYPLKKLRAEMGGNSHSRRILGQIGEDKKVNVPTGITVYDDKNV-LIGELNEPDSELIV 151 Query: 118 APGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 + TN G+ G+ K I L+LKLIADIG++G PNAGKST L Sbjct: 152 G-------KGGVGGNKTN-----GYCGLKGESKSIKLELKLIADIGLVGFPNAGKSTLLK 199 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTER 236 +++ AKPKIA YPFTT+ PN+G++ + ++ +AD+PG+I+ AH G+G RFL+H ER Sbjct: 200 AISNAKPKIASYPFTTIRPNIGVMTYDDLRQISMADLPGLIEGAHCNIGMGHRFLRHVER 259 Query: 237 THVLLHIV--SALEENVQAAYQCILDELSAYN 266 T +LL +V + + N + ++ LD + N Sbjct: 260 TKLLLLVVDINGFQLNPKHQFRSCLDTVVLLN 291 >gi|170052067|ref|XP_001862053.1| claudin 12 [Culex quinquefasciatus] gi|167873078|gb|EDS36461.1| claudin 12 [Culex quinquefasciatus] Length = 393 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 93/275 (33%), Positives = 144/275 (52%), Gaps = 34/275 (12%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 KFLD ++ +R G GG G + V+ QA TL D + Sbjct: 23 KFLDTLRLSLRGGHGGNGLPKYGGVGGQGGA------------VYFQAKEG-TTLKDVLH 69 Query: 62 Q---QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 + + A +GE+ K G +G D + VPVG +V EE G L+ +LD++G+ + A Sbjct: 70 KYPGKRVLAGNGEESSKVRILGRRGGDRAVEVPVGIRVLEEGG-ELVAELDEDGKTCLAA 128 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 + + PG Q +++ L LKLIAD+G++G PNAGKST + + Sbjct: 129 ---------GGGSGGCSGNSFLGKPG---QTRMVTLDLKLIADVGLVGFPNAGKSTLVKA 176 Query: 179 VTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 ++ A PKIA YPFTT+ P +G ++ + Y++ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 177 LSNATPKIASYPFTTIRPQIGTIEYDDYRQVTIADLPGLIEGAHANFGMGHKFLKHVERT 236 Query: 238 HVLLHIVSALEENVQAAYQ---CILDELSAYNSEL 269 +LL IV + +++ C L+ + A N EL Sbjct: 237 RLLLIIVDIFGFQLSQSHRKRNC-LENIYALNREL 270 >gi|195030136|ref|XP_001987924.1| GH10882 [Drosophila grimshawi] gi|193903924|gb|EDW02791.1| GH10882 [Drosophila grimshawi] Length = 375 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 112/323 (34%), Positives = 171/323 (52%), Gaps = 10/323 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D +V G GG G +SF + E GPDGG GG GG V +QA+ N + +F + Sbjct: 44 FSDAKRVRTVGGKGGDGCVSFLQLWCNERAGPDGGDGGNGGHVILQAS---NDVRNFNHV 100 Query: 63 QH-FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 +A G G + G + V+ VP+GT V G+ ++ DL + A GG Sbjct: 101 SSVLRASEGGIGGAKECHGKNAKHTVIKVPIGTVVRSGKGL-IVADLATADLMFVAARGG 159 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN F + +P G G++ L+L+ +A++G+IG PNAGKST L ++TR Sbjct: 160 AGGKGNRFFTTDKETSPKVCEYGPPGEDSSYILELRSMAEVGMIGFPNAGKSTLLNALTR 219 Query: 182 AKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPK+A Y FTTL P+LG V+ E + + +AD+PG++ +AH+ G+G +FLKH ER +L Sbjct: 220 AKPKVAPYAFTTLRPHLGTVQYEDHVQLTIADLPGLVPDAHRNKGLGIQFLKHAERCTLL 279 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 L ++ A YQ + EL + L + ++V +++D S A +L Q Sbjct: 280 LFVLDASAPEPWTQYQQLKHELEQFGGSLANRPQLVVANKMDVPAS---ASNYEQLQQQL 336 Query: 301 GQVPFE-FSSITGHGIPQILECL 322 + S+ GH + Q+L + Sbjct: 337 DEPKLLGISAKMGHNLTQLLSTI 359 >gi|309800493|ref|ZP_07694647.1| Spo0B-associated GTP-binding protein [Streptococcus infantis SK1302] gi|308115888|gb|EFO53410.1| Spo0B-associated GTP-binding protein [Streptococcus infantis SK1302] Length = 306 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 81/202 (40%), Positives = 125/202 (61%), Gaps = 10/202 (4%) Query: 130 FKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADY 189 + N AP + G GQE+ + L+LK++AD+G++G P+ GKST L+ +T AKPKI Y Sbjct: 1 MRHQKNPAPEISENGEPGQERELQLELKILADVGLVGFPSVGKSTLLSVITSAKPKIGAY 60 Query: 190 PFTTLYPNLGIVKEGYKE-FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SA 246 FTT+ PNLG+V+ E F +AD+PG+I+ A QG G+G +FL+H ERT V+LHI+ SA Sbjct: 61 HFTTIVPNLGMVRTQSGESFAVADLPGLIEGASQGVGLGTQFLRHIERTRVILHIIDMSA 120 Query: 247 LE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS-DTLARKKNELAT---QCG 301 E + Y I EL +YN L ++ +I+ +++D +S + L K +LAT + Sbjct: 121 SEGRDPYEDYLAINKELESYNLRLMERPQIIVANKMDMPESKENLEEFKKKLATNFDEFE 180 Query: 302 QVP--FEFSSITGHGIPQILEC 321 ++P F S +T G+ +L+ Sbjct: 181 ELPAIFPISGLTKQGLAPLLDA 202 >gi|157107339|ref|XP_001649734.1| 35 kDa GTP-binding protein, putative [Aedes aegypti] gi|108879611|gb|EAT43836.1| 35 kDa GTP-binding protein, putative [Aedes aegypti] Length = 385 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/275 (36%), Positives = 147/275 (53%), Gaps = 34/275 (12%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 KFLD ++ +R G GG G + V+ A TL D + Sbjct: 23 KFLDSLRLAVRGGHGGNGLPKYGGVGGQGGA------------VYFIAKEG-KTLKDVLH 69 Query: 62 QQHFK---AQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 + K A +GE+ K G +G D + VPVG +V E+DG + + +LD+EG+ + A Sbjct: 70 KYRAKKVTAGNGEESSKARILGRRGLDEQVEVPVGIRVLEDDG-AFVAELDEEGKTCLAA 128 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG+GG F G GQ + + L LKLIAD+G++G PNAGKST + + Sbjct: 129 GGGSGGCAGNSF------------LGKAGQTRTLKLDLKLIADVGLVGFPNAGKSTLVKA 176 Query: 179 VTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 ++ A PKIA YPFTT+ P +G ++ E Y++ +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 177 LSNATPKIASYPFTTIRPQIGTIEYEDYRQITIADLPGLIEGAHANFGMGHKFLKHVERT 236 Query: 238 HVLLHIVSALEENVQAAYQ---CILDELSAYNSEL 269 +LL IV + +++ C L+ + A N EL Sbjct: 237 RLLLIIVDVFGFQLSQSHRRRNC-LENIYALNKEL 270 >gi|58332182|ref|NP_001011239.1| GTP-binding protein 10 [Xenopus (Silurana) tropicalis] gi|82179492|sp|Q5M8V6|GTPBA_XENTR RecName: Full=GTP-binding protein 10 gi|56556222|gb|AAH87811.1| hypothetical LOC496681 [Xenopus (Silurana) tropicalis] Length = 383 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 110/351 (31%), Positives = 166/351 (47%), Gaps = 57/351 (16%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++Y++ GGAGG+ R G D + + L + D Sbjct: 15 FIDNLRIYVK---GGAGGMGLPRLGGQGGKGGDV-------KLVAKKEVTLKKIKDKFPH 64 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F G R G GE + VP G + E G+ I +LD+EG I +A GG Sbjct: 65 KRFIGGVGGNSSVRALKGQPGEVCQVEVPSGIVITTEHGVK-IGELDKEGDEIRVARGGQ 123 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 GG F S GQ++II L LKLI+D+G++G PNAGKS+ L+ ++ A Sbjct: 124 GGVFQTDFLPSK------------GQKRIIHLDLKLISDVGLVGFPNAGKSSLLSRISHA 171 Query: 183 KPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KP++A+Y FTT+ P LG I+ YK+ +AD+PG+I+ AH G+G +FLKH ERT LL Sbjct: 172 KPQVAEYAFTTVKPELGRIMYPDYKQISVADLPGLIEGAHYNRGMGHKFLKHIERTRQLL 231 Query: 242 HIV---------SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 +V S L + + EL Y EL K ++ ++++D +++ K Sbjct: 232 FVVDVAGFQLSASTLYRSAFETVLLLTLELQLYKQELLDKPALLAVNKMDLPNAN---EK 288 Query: 293 KNELATQ---------------CGQVPFEF------SSITGHGIPQILECL 322 EL Q + P EF S+ TG G+ ++ C+ Sbjct: 289 FEELLKQLENPAGNFHLLPDELVPERPIEFKHIIPVSAATGQGLENLIGCI 339 >gi|195115679|ref|XP_002002384.1| GI12998 [Drosophila mojavensis] gi|193912959|gb|EDW11826.1| GI12998 [Drosophila mojavensis] Length = 372 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 104/288 (36%), Positives = 159/288 (55%), Gaps = 6/288 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D +V G GG G +SF + E GPDGG GG GG V QA+ N + +F + Sbjct: 44 FSDAKRVRAIGGKGGDGCVSFLQLWCNERAGPDGGDGGNGGHVIFQAS---NDVRNFNHV 100 Query: 63 QH-FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 +A G G + G + V+ VPVGT V +G+ ++ DL + A GG Sbjct: 101 NSVLQAAEGGIGSAKECHGKNAKHTVIKVPVGTVVRNAEGL-IVADLGSVDLMFVAARGG 159 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN F + +P G G++ L+L+ +A++G+IG PNAGKST L ++TR Sbjct: 160 AGGKGNRFFTTDKETSPKVCEYGPAGEDMSYMLELRSMAEVGLIGFPNAGKSTLLNALTR 219 Query: 182 AKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPK+A Y FTTL P+LG V+ + + + +AD+PG++ +AH+ G+G +FLKH ER +L Sbjct: 220 AKPKVAPYAFTTLRPHLGTVQYDDHVQLTIADLPGLVPDAHRNKGLGIQFLKHAERCTLL 279 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT 288 L ++ A Y+ ++ EL + L K+ +V +++D S + Sbjct: 280 LFVLDASAPEPWMQYKQLMHELEQFGGRLAKRPHLVVANKMDVESSAS 327 >gi|71747846|ref|XP_822978.1| GTP-binding protein [Trypanosoma brucei TREU927] gi|70832646|gb|EAN78150.1| GTP-binding protein, putative [Trypanosoma brucei] Length = 472 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 105/281 (37%), Positives = 163/281 (58%), Gaps = 5/281 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D KV I SG GG G E EF GP GG+GGRGG+V ++ + +N L + Sbjct: 17 FVDAVKVLISSGAGGDGASVMSHEHGNEFAGPGGGNGGRGGNVMLKGSKKVNDLSHIKAM 76 Query: 63 -QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 A G G R G KG+D++L +PVGT V + D ++ D+D++G ++L GG Sbjct: 77 GTQISAAPGSVGFARTAHGKKGKDLLLELPVGTTVVDVDTNEVVYDVDEDGVELLLLQGG 136 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA F + + +P + G+ G + L+LK +AD+G++G PNAGKS+ L++++ Sbjct: 137 QGGKGNAAFANKWHHSPTESTRGLPGNTMLAQLELKSLADVGLVGYPNAGKSSILSAISS 196 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +KP IA Y FTT P +G + + Y +AD+PG+I+ A + G+G RFL+H ERT L Sbjct: 197 SKPTIAPYAFTTKRPYVGFIYDLYGNTCRVADLPGLIEGAFENRGLGHRFLRHAERTQSL 256 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIE--IVGLS 279 +++ E ++ L+ A + LR+++E + GLS Sbjct: 257 AYVIDMAESYNPSSSTKPLEPWEAVET-LRRELEYYLPGLS 296 >gi|194759412|ref|XP_001961943.1| GF14685 [Drosophila ananassae] gi|190615640|gb|EDV31164.1| GF14685 [Drosophila ananassae] Length = 376 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 100/282 (35%), Positives = 158/282 (56%), Gaps = 6/282 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D +V G GG G +SF + E GPDGG GG GG V QA+ N + +F + Sbjct: 51 FSDAKRVRAIGGKGGDGCVSFLQLWCNERAGPDGGDGGHGGHVVFQAS---NDVRNFNHV 107 Query: 63 QH-FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 +A+ GE+G ++ G + ++ VP+GT + G ++ DL + A GG Sbjct: 108 DSVLRAEEGERGSAKDCHGKNAKHSLIKVPIGTVIRNSQG-QIVGDLAHANLMFVAARGG 166 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GN F + +P G G++ L+L+ +AD+G+IG PNAGKST L ++TR Sbjct: 167 AGGKGNRFFTTDKETSPKVCEYGPTGEDLSYTLELRSMADVGLIGYPNAGKSTLLNALTR 226 Query: 182 AKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 AKPK+A Y FTTL P+LG ++ + + + +AD+PG++ +AH G+G +FLKH ER +L Sbjct: 227 AKPKVAPYAFTTLRPHLGTVLYDDHVQLTIADLPGLVPDAHLNKGLGIQFLKHAERCTLL 286 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 L ++ A Y+ ++ EL + L + ++V +++D Sbjct: 287 LFVLDASAAKPWKHYEQLMHELRQFGGSLASRPQLVVANKLD 328 >gi|223940693|ref|ZP_03632532.1| GTP-binding protein Obg/CgtA [bacterium Ellin514] gi|223890620|gb|EEF57142.1| GTP-binding protein Obg/CgtA [bacterium Ellin514] Length = 397 Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 75/187 (40%), Positives = 120/187 (64%), Gaps = 4/187 (2%) Query: 100 DGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLI 159 +G L+ DL +GQ+ +L GG GG GN +F ++ +Q P +A PG G E L+L+LI Sbjct: 161 EGEELVADLTVDGQQFVLCKGGRGGLGNRNFATARHQTPRFAQPGEPGDEGNYRLELRLI 220 Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIK 218 A++G++G PNAGKST L +++RA+PKIA YPFTTL+P +GIV+ + + D+PG+I+ Sbjct: 221 AEVGLVGYPNAGKSTLLTAISRARPKIAPYPFTTLHPQIGIVEYADFARLTVCDVPGLIE 280 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEI 275 AH G+G FL+H ER +L+ ++ + +A Y+ +L EL ++ L +K + Sbjct: 281 GAHNNVGLGHAFLRHIERCKILVLLIDMAGTDNRAPWDDYKQLLSELELHDPTLLEKPRL 340 Query: 276 VGLSQID 282 V +++D Sbjct: 341 VVANKMD 347 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/95 (47%), Positives = 62/95 (65%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+DE K+Y R+G GG G ++F RE +I GGP GG+GGRGG+V +QA +LN LI Y Sbjct: 2 FIDEIKIYARAGHGGKGCVAFHREAYITKGGPSGGNGGRGGNVILQADHDLNNLIHQFYN 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVF 97 A+ GE GM + G G+D+++ VP GT V+ Sbjct: 62 PRLIAETGEAGMGKGMDGHAGKDIIVKVPCGTLVW 96 >gi|198429189|ref|XP_002122906.1| PREDICTED: similar to GTP-binding protein 10 [Ciona intestinalis] Length = 378 Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 92/313 (29%), Positives = 161/313 (51%), Gaps = 39/313 (12%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWI----QATSNLNTLID 58 F+D+ ++Y+R G GG G + GDV++ ++ L ++ D Sbjct: 17 FIDKLRIYVRGGTGGNGHPTLGGIGGRG------------GDVYLVGATKSDMTLKSMKD 64 Query: 59 FRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 ++ F A G+ K+ SG G + + VP G + + ++ ++ ++++A Sbjct: 65 KYPEKRFVADTGQSSRKQALSGLNGASIYVQVPHGISIVDAANNQVMGEISGSLDKLLVA 124 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 + T + PG Q + ++L LKLIAD+G +G PNAGKST L+ Sbjct: 125 ---------RGGRGGTRSTGFIPRPG---QRRNLYLDLKLIADVGFVGFPNAGKSTLLSR 172 Query: 179 VTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 +++AKPKIA YPFTT+ P +G+++ +++ LAD+PG+++ A+ G G FLKH ERT Sbjct: 173 ISKAKPKIASYPFTTITPQIGVLEYPDFRKIQLADLPGLVEGAYLNKGRGHSFLKHIERT 232 Query: 238 HVLLHIVS------ALEENVQAAY---QCILDELSAYNSELRKKIEIVGLSQIDTVDSDT 288 +LL +V + + + A+ Q + ELS+Y+ L K I+ ++++D +D Sbjct: 233 KLLLFVVDISGFQLSTKHQFRNAFETVQLLTQELSSYDGTLTNKPSILAVNKMDLPAADD 292 Query: 289 LARK-KNELATQC 300 L K K+ L T+ Sbjct: 293 LFNKLKDGLNTRT 305 >gi|320163564|gb|EFW40463.1| GTP-binding protein [Capsaspora owczarzaki ATCC 30864] Length = 839 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 95/303 (31%), Positives = 160/303 (52%), Gaps = 43/303 (14%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVW--IQATSNLNTLIDFR 60 F+D ++ +R+GDGG G + G+GG GG V+ ++ T +L + Sbjct: 449 FVDRVRISVRAGDGGTGRPA--------------GTGGAGGSVYLVVKQTGSLANIPKL- 493 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +A G +R G G+D ++VP GT + + ++ D+ G+ +LA G Sbjct: 494 ----VEAGRGADSRERAPRGRGGDDSYVSVPPGTVISDGRTGKVMFDVSTIGESYLLAKG 549 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG + G G++ + L+LK IAD+G++G PNAGKST L +++ Sbjct: 550 GAGGGQDGGLPR-----------GGKGEQLPLNLELKSIADVGLVGFPNAGKSTLLTAIS 598 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 A PKIA YPFTTL P++G+V+ + + +AD+PG+++ AHQ G+G +FL+H ERT Sbjct: 599 NATPKIAPYPFTTLRPHIGVVQYDQFTRIAVADVPGLVEGAHQNVGMGHQFLRHIERTSA 658 Query: 240 LLHIVS------ALEENVQA---AYQCILDELSAY-NSELRKKIEIVGLSQIDTVDSDTL 289 LL++V +++ + ++ + DELS Y + ++ IV L+++D + Sbjct: 659 LLYVVDVNGFQLSMDSPFRTPAETFRLLFDELSVYGGGGMERRPFIVVLNKMDQPGASAA 718 Query: 290 ARK 292 A K Sbjct: 719 ATK 721 >gi|195118884|ref|XP_002003962.1| GI18192 [Drosophila mojavensis] gi|193914537|gb|EDW13404.1| GI18192 [Drosophila mojavensis] Length = 384 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 93/274 (33%), Positives = 143/274 (52%), Gaps = 33/274 (12%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREK----FIEFGGPDGGSGGRGGDVWIQATSNLNTLID 58 FLD ++ +R G GG G + + F +G + + NL Sbjct: 24 FLDTLRLTVRGGHGGNGLPKYGGVGGQGGCVYFVAKEGLT-------LRKVAQNLR---- 72 Query: 59 FRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 ++ +A +GE K + G +G D + VP+G QV++E L+ DL++ I+A Sbjct: 73 ---EKRVQATNGEDSSKVSIYGKRGMDQRIEVPLGVQVYDEQQQKLLADLNEPDSSCIVA 129 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG +F G G+ + + L LKLIAD+G++G PNAGKST L + Sbjct: 130 GGGTGGCVGNNFI------------GRPGESRTVQLDLKLIADVGLVGFPNAGKSTLLKA 177 Query: 179 VTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 ++ AKPKIA YPFTT+ P +G V+ + +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 178 ISNAKPKIAAYPFTTIRPQVGTVEYADLRSITIADLPGLIEGAHANFGMGHKFLKHIERT 237 Query: 238 HVLLHIVS--ALEENVQAAYQCILDELSAYNSEL 269 +LL +V + + + A++ L + A N EL Sbjct: 238 RLLLFMVDIFGFQLSPRHAHRDCLSNIYALNKEL 271 >gi|8778535|gb|AAF79543.1|AC022464_1 F22G5.1 [Arabidopsis thaliana] Length = 445 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 71/164 (43%), Positives = 97/164 (59%), Gaps = 24/164 (14%) Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHF----------KSSTNQAPYYA------------- 141 + +L Q+GQR+I+A GG GG GN KS+ Q + Sbjct: 177 VAELTQQGQRVIIARGGEGGLGNVSATRYVRGSKFAKSTIRQTNLRSMEDDAEEDDERSS 236 Query: 142 -NPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI 200 G+LG E ++ L+LK IAD+G++G+PNAGKST L +++RAKP++ Y FTTL PNLG Sbjct: 237 IKAGLLGSEAVLILELKSIADVGLVGMPNAGKSTLLGALSRAKPRVGHYAFTTLRPNLGN 296 Query: 201 VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 V +ADIPG+IK AHQ G+G FL+H ERT VL ++V Sbjct: 297 VNYDDFSMTVADIPGLIKGAHQNRGLGHNFLRHIERTKVLAYVV 340 >gi|153871763|ref|ZP_02000852.1| GTP-binding protein, GTP1/Obg family protein [Beggiatoa sp. PS] gi|152071773|gb|EDN69150.1| GTP-binding protein, GTP1/Obg family protein [Beggiatoa sp. PS] Length = 186 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/171 (43%), Positives = 119/171 (69%), Gaps = 7/171 (4%) Query: 154 LKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILAD 212 L+L+++AD+G++GLPNAGKSTF+ +V+ A+PK+ADYPFTTL+PNLG+V + + F++AD Sbjct: 3 LELQVLADVGLLGLPNAGKSTFIRAVSAARPKVADYPFTTLHPNLGVVSIDIDRSFVIAD 62 Query: 213 IPGIIKNAHQGAGIGDRFLKHTERTHVLLHI--VSALEEN-VQAAYQCILDELSAYNSEL 269 IPG+I+ A G G+G +FL+H RTH+LLHI +S L+ + VQ A + I+ EL Y+ +L Sbjct: 63 IPGLIEGAADGHGLGIQFLRHLSRTHLLLHIIDISPLDSDPVQDAIK-IIQELKKYSPKL 121 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCG-QVP-FEFSSITGHGIPQI 318 ++ + L++ID + SD + + Q P FE S+++G G ++ Sbjct: 122 AERERWLILNKIDLLPSDEQTEYCQLIIEELNWQGPAFEISAVSGQGCMEV 172 >gi|125983963|ref|XP_001355746.1| GA10450 [Drosophila pseudoobscura pseudoobscura] gi|121994395|sp|Q29K06|GTPBA_DROPS RecName: Full=GTP-binding protein 10 homolog gi|54644063|gb|EAL32805.1| GA10450 [Drosophila pseudoobscura pseudoobscura] Length = 383 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 87/226 (38%), Positives = 127/226 (56%), Gaps = 23/226 (10%) Query: 67 AQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFG 126 A GE K + G +G D + VPVG QV++E L+ DL++ + I+A GG GG Sbjct: 78 ASSGEDSSKVSIFGKRGVDTRIEVPVGVQVYDEQQ-KLLADLNENDAKCIVAGGGTGGCT 136 Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 +F G G+ +I+ L LKLIAD+G++G PNAGKST L +V+ AKPKI Sbjct: 137 GNNFL------------GRPGENRIVNLDLKLIADVGLVGFPNAGKSTLLKAVSNAKPKI 184 Query: 187 ADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS 245 A YPFTT+ P +G ++ G + LAD+PG+I+ AH G+G +FLKH ERT +LL +V Sbjct: 185 AAYPFTTIRPQIGTIEYGDLRSISLADLPGLIEGAHANFGMGHKFLKHIERTRLLLFMVD 244 Query: 246 AL---------EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 + A + EL Y+ L +K ++ L+++D Sbjct: 245 IFGFQLSPRHPHRDCLANIYSLNKELELYDPSLLEKPCVLLLNKMD 290 >gi|195156383|ref|XP_002019080.1| GL25622 [Drosophila persimilis] gi|194115233|gb|EDW37276.1| GL25622 [Drosophila persimilis] Length = 383 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 87/226 (38%), Positives = 127/226 (56%), Gaps = 23/226 (10%) Query: 67 AQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFG 126 A GE K + G +G D + VPVG QV++E L+ DL++ + I+A GG GG Sbjct: 78 ASSGEDSSKVSIFGKRGVDTRIEVPVGVQVYDEQQ-KLLADLNENDAKCIVAGGGTGGCT 136 Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 +F G G+ +I+ L LKLIAD+G++G PNAGKST L +V+ AKPKI Sbjct: 137 GNNFL------------GRPGENRIVNLDLKLIADVGLVGFPNAGKSTLLKAVSNAKPKI 184 Query: 187 ADYPFTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS 245 A YPFTT+ P +G ++ G + LAD+PG+I+ AH G+G +FLKH ERT +LL +V Sbjct: 185 AAYPFTTIRPQIGTIEYGDLRSISLADLPGLIEGAHANFGMGHKFLKHIERTRLLLFMVD 244 Query: 246 AL---------EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 + A + EL Y+ L +K ++ L+++D Sbjct: 245 IFGFQLSPRHPHRDCLANIYSLNKELELYDPSLLEKPCVLLLNKMD 290 >gi|261332825|emb|CBH15820.1| GTP-binding protein, putative [Trypanosoma brucei gambiense DAL972] Length = 472 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 103/281 (36%), Positives = 163/281 (58%), Gaps = 5/281 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D K+ I SG GG G E EF GP GG+GGRGG+V ++ + +N L + Sbjct: 17 FVDAVKLLISSGAGGDGASVMSHEHGNEFAGPGGGNGGRGGNVMLKGSKKVNDLSHIKAM 76 Query: 63 -QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 A G G R G KG+D++L +PVGT V + D ++ D+D++G ++L GG Sbjct: 77 GTQISAAPGSVGFARTAHGKKGKDLLLELPVGTTVVDVDTNEVVYDVDEDGVELLLLQGG 136 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTR 181 GG GNA F + + +P + G+ G + L+LK +AD+G++G PNAGKS+ L++++ Sbjct: 137 QGGKGNAAFANKWHHSPTESTRGLPGNTMLAQLELKSLADVGLVGYPNAGKSSILSAISS 196 Query: 182 AKPKIADYPFTTLYPNLGIVKEGYKEFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +KP IA Y FTT P +G + + Y +AD+PG+I+ A + G+G +FL+H ERT L Sbjct: 197 SKPTIAPYAFTTKRPYVGFIYDLYGNTCRVADLPGLIEGAFENRGLGHKFLRHAERTQSL 256 Query: 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIE--IVGLS 279 +++ E ++ L+ A + LR+++E + GLS Sbjct: 257 AYVIDMAESYNPSSSTKPLEPWEAVET-LRRELEYYLPGLS 296 >gi|8439910|gb|AAF75096.1|AC007583_32 It is a member of GTP1/OBG family PF|01018 [Arabidopsis thaliana] Length = 1029 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 71/164 (43%), Positives = 97/164 (59%), Gaps = 24/164 (14%) Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHF----------KSSTNQAPYYA------------- 141 + +L Q+GQR+I+A GG GG GN KS+ Q + Sbjct: 761 VAELTQQGQRVIIARGGEGGLGNVSATRYVRGSKFAKSTIRQTNLRSMEDDAEEDDERSS 820 Query: 142 -NPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI 200 G+LG E ++ L+LK IAD+G++G+PNAGKST L +++RAKP++ Y FTTL PNLG Sbjct: 821 IKAGLLGSEAVLILELKSIADVGLVGMPNAGKSTLLGALSRAKPRVGHYAFTTLRPNLGN 880 Query: 201 VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 V +ADIPG+IK AHQ G+G FL+H ERT VL ++V Sbjct: 881 VNYDDFSMTVADIPGLIKGAHQNRGLGHNFLRHIERTKVLAYVV 924 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 42/101 (41%), Positives = 59/101 (58%), Gaps = 4/101 (3%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR- 60 + D +Y R G+GG+G S RR + +G PDGG+GGRGGDV ++ T + + DF Sbjct: 585 RMRDRFTLYARGGEGGSGCSSVRRSRADRYGKPDGGNGGRGGDVILECT---HAVWDFSG 641 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDG 101 Q H K G +NR G +GED VL VP+GT + ++G Sbjct: 642 LQPHIKGGKAGHGTSKNRIGNRGEDKVLLVPIGTVIHLQEG 682 >gi|145323774|ref|NP_001077476.1| GTP binding [Arabidopsis thaliana] gi|332190028|gb|AEE28149.1| GTP-binding protein Obg/CgtA [Arabidopsis thaliana] Length = 493 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 71/164 (43%), Positives = 97/164 (59%), Gaps = 24/164 (14%) Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHF----------KSSTNQAPYYA------------- 141 + +L Q+GQR+I+A GG GG GN KS+ Q + Sbjct: 225 VAELTQQGQRVIIARGGEGGLGNVSATRYVRGSKFAKSTIRQTNLRSMEDDAEEDDERSS 284 Query: 142 -NPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI 200 G+LG E ++ L+LK IAD+G++G+PNAGKST L +++RAKP++ Y FTTL PNLG Sbjct: 285 IKAGLLGSEAVLILELKSIADVGLVGMPNAGKSTLLGALSRAKPRVGHYAFTTLRPNLGN 344 Query: 201 VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 V +ADIPG+IK AHQ G+G FL+H ERT VL ++V Sbjct: 345 VNYDDFSMTVADIPGLIKGAHQNRGLGHNFLRHIERTKVLAYVV 388 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 42/101 (41%), Positives = 59/101 (58%), Gaps = 4/101 (3%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR- 60 + D +Y R G+GG+G S RR + +G PDGG+GGRGGDV ++ T + + DF Sbjct: 49 RMRDRFTLYARGGEGGSGCSSVRRSRADRYGKPDGGNGGRGGDVILECT---HAVWDFSG 105 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDG 101 Q H K G +NR G +GED VL VP+GT + ++G Sbjct: 106 LQPHIKGGKAGHGTSKNRIGNRGEDKVLLVPIGTVIHLQEG 146 >gi|118788994|ref|XP_317120.3| AGAP008337-PA [Anopheles gambiae str. PEST] gi|116123013|gb|EAA12226.3| AGAP008337-PA [Anopheles gambiae str. PEST] Length = 384 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 77/207 (37%), Positives = 119/207 (57%), Gaps = 18/207 (8%) Query: 67 AQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFG 126 A +GE+ K G +G D + VPVG +V E++ L+C+LD+EG+ + Sbjct: 78 AGNGEESSKARILGRRGTDQKVEVPVGIRVLEQE-TGLLCELDEEGKTFL---------A 127 Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 + + + PG Q + + L LKLIAD+G++G PNAGKST + +++ A PKI Sbjct: 128 SGGGSGGCSGNSFLGKPG---QLRTLTLDLKLIADVGLVGFPNAGKSTLVKAISNASPKI 184 Query: 187 ADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS 245 A YPFTT+ P + ++ E Y++ +AD+PG+I+ AH G+G +FLKH ERT +LL +V Sbjct: 185 ASYPFTTIRPQIATIEYEDYRQITIADLPGLIEGAHANFGMGHKFLKHVERTRLLLIMVD 244 Query: 246 ALEENVQAAYQ---CILDELSAYNSEL 269 + +Q C L+ + A N EL Sbjct: 245 VFGFQLSQQHQKRNC-LETVYALNKEL 270 >gi|291190102|ref|NP_001167429.1| GTP-binding protein 10 [Salmo salar] gi|223649018|gb|ACN11267.1| GTP-binding protein 10 [Salmo salar] Length = 300 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 83/220 (37%), Positives = 127/220 (57%), Gaps = 26/220 (11%) Query: 101 GISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIA 160 I I +L+ EG R+++A GG GG ++ F S GQ + I L LKLIA Sbjct: 22 SIPSIGELNTEGDRVLVARGGQGGSYHSEFLPSK------------GQTRQIRLDLKLIA 69 Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKN 219 D+G++G PNAGKS+ L +++ AKP+IA Y FTTL P +G ++ E +K+ +AD+PG+I+ Sbjct: 70 DLGLVGFPNAGKSSLLTALSHAKPQIASYAFTTLRPEIGKVMYEDHKQISVADLPGLIEG 129 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVS------ALEENVQAAY---QCILDELSAYNSELR 270 AH G+G +FLKH ERT LL +V A + ++A+ Q ++ EL Y +L Sbjct: 130 AHMNRGMGHQFLKHVERTRQLLFVVDVCGFQLASKTPFRSAFEAVQLLIKELELYKEDLP 189 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSI 310 K ++ ++++D D++ K EL Q P EFS + Sbjct: 190 CKPAVLVVNKMDLPDAED---KLTELQEQLLN-PHEFSHL 225 >gi|134055910|emb|CAK37388.1| unnamed protein product [Aspergillus niger] Length = 494 Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 106/283 (37%), Positives = 157/283 (55%), Gaps = 20/283 (7%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+ + I +G GG G +SF REK++E G P+GG GG GG ++IQA + +L + Sbjct: 80 FQDKCRSTIYAGAGGHGCVSFLREKYVEEGPPNGGDGGSGGSIYIQAVEGMTSLHKLARR 139 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI----SLICDLDQEGQR-IIL 117 KA G+ G +++ G +G DV+L VP+GT V E D + + DL Q + I+L Sbjct: 140 GIIKAGRGKNGQGKSKGGKRGNDVLLQVPIGTVVREVDPLEPKAPIYLDLSQHMDKPILL 199 Query: 118 APGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 A GG GG GN HF + P +A+ G G + +LKL+AD+G++G PNAGKST L Sbjct: 200 AAGGVGGLGNPHFVTRNMNRPTFASRGEGGMRLELEFELKLLADVGLVGKPNAGKSTLLR 259 Query: 178 SVTRAKPKIADYPFTTLYPNLGIV---------------KEGYKEFILADIPGIIKNAHQ 222 S+T ++ ++ ++ FTTL PN+G V K F +ADIPG+I++AH Sbjct: 260 SLTNSRTRVGNWEFTTLSPNIGTVVIDNHKGRPLVESKGKARRTNFTIADIPGLIEDAHL 319 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 G+G FL+H ER +L +V + + + EL Y Sbjct: 320 DKGLGLGFLRHIERAGILAFVVDLSAGDPVQGLKNLWHELGEY 362 >gi|242069565|ref|XP_002450059.1| hypothetical protein SORBIDRAFT_05g027660 [Sorghum bicolor] gi|241935902|gb|EES09047.1| hypothetical protein SORBIDRAFT_05g027660 [Sorghum bicolor] Length = 540 Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 75/193 (38%), Positives = 117/193 (60%), Gaps = 15/193 (7%) Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHF-------KSSTNQAPYYANPGILGQEKIIWLKLK 157 + ++ + GQR+I+A GG GG GNA K++ + + G G E + L+LK Sbjct: 291 VAEMTKPGQRLIVARGGEGGLGNAFIMKEMRPSKANKQEKIARLSTGQPGTESFLILELK 350 Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGI 216 IAD+G++GLPNAGKST L++++RA+P+IADY FTTL PN+G + E Y +ADIPG+ Sbjct: 351 SIADVGLVGLPNAGKSTLLSALSRAQPEIADYEFTTLRPNIGSLTYEDYFSVKVADIPGL 410 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVS-ALEENVQAA------YQCILDELSAYNSEL 269 IK AH+ G+G FL+H ERT V+ +++ A N + Q ++ EL Y + Sbjct: 411 IKGAHENRGLGHAFLRHIERTKVIAYVLDLAATLNGRKGVPPWEQLQDLVSELEHYQEGM 470 Query: 270 RKKIEIVGLSQID 282 ++ ++ ++ID Sbjct: 471 TRRPSLIVANKID 483 Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 4/100 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR-Y 61 +D+ ++ + GDGG G +S RR + G PDGG+GG+GGDV ++ + ++ DF Sbjct: 53 MVDKFRMRAKGGDGGNGCVSLRRSRSSRLGMPDGGNGGKGGDVILECS---RSIWDFSGL 109 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDG 101 Q H + G G+ +N+ G +G D + VPVGT + +G Sbjct: 110 QHHMRGGRGGNGVSKNQIGTRGSDKIAQVPVGTVIHLVEG 149 >gi|297849056|ref|XP_002892409.1| hypothetical protein ARALYDRAFT_311814 [Arabidopsis lyrata subsp. lyrata] gi|297338251|gb|EFH68668.1| hypothetical protein ARALYDRAFT_311814 [Arabidopsis lyrata subsp. lyrata] Length = 1010 Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 72/164 (43%), Positives = 96/164 (58%), Gaps = 24/164 (14%) Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHF----------KSSTNQAPYYA------------- 141 + +L Q+GQRII+A GG GG GN K++ Q + Sbjct: 742 VAELTQQGQRIIIARGGEGGLGNVSATRYVRGSKFAKTAIRQTNLRSMEDDAEDDDERSS 801 Query: 142 -NPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI 200 G LG E ++ L+LK IAD+G++GLPNAGKST L +++RAKP++ Y FTTL PNLG Sbjct: 802 IKAGSLGSEAVLILELKSIADVGLVGLPNAGKSTLLGALSRAKPRVGHYAFTTLRPNLGN 861 Query: 201 VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 V +ADIPG+IK AHQ G+G FL+H ERT VL ++V Sbjct: 862 VNYDDFSMTVADIPGLIKGAHQNRGLGHNFLRHIERTKVLAYVV 905 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 5/101 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR- 60 + D +Y R G+GG+G S RR + +G PDGG+GGRGGDV ++ T + + DF Sbjct: 578 RMRDRFTLYARGGEGGSGCSSVRRSRADRYGKPDGGNGGRGGDVILECT---HAVWDFSG 634 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV-FEED 100 Q H K G +NR G +GED VL VP+GT + +ED Sbjct: 635 LQPHIKGGKAGHGTSKNRIGNRGEDKVLQVPIGTVIHLQED 675 >gi|17944993|gb|AAL48559.1| RE03627p [Drosophila melanogaster] Length = 383 Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 144/292 (49%), Gaps = 37/292 (12%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 FLD ++ +R G GG G + V++ A L ++ Sbjct: 24 FLDTLRLAVRGGHGGNGLPKYGGVGGQGGC------------VYLVAKEGLTLRKVVQGL 71 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + A GE K + G +G D + VPVG QV++ D LI DLD+ I+A G Sbjct: 72 KDKRVAASSGEDSSKASIFGRRGADQRIEVPVGVQVYD-DQQKLIADLDEHEATCIVAGG 130 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG +F G G+ + + L LKLIAD+G++G PNAGKST L +V+ Sbjct: 131 GTGGCTTTNFL------------GRPGENRTVNLDLKLIADVGLVGFPNAGKSTLLKAVS 178 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIA YPFTT+ P +G ++ + +AD+PG+I+ AH G+G +FLKH ERT + Sbjct: 179 NAKPKIAAYPFTTIRPQIGTIEYRDLRSITVADLPGLIEGAHANFGMGHKFLKHIERTRL 238 Query: 240 LLHIVSAL---------EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 L+ +V + A + EL Y+ L +K ++ L+++D Sbjct: 239 LVFMVDIFGFQLSPKHPHRDCLANVYALNKELELYDPSLLEKPSVLLLNKMD 290 >gi|194760467|ref|XP_001962461.1| GF15477 [Drosophila ananassae] gi|190616158|gb|EDV31682.1| GF15477 [Drosophila ananassae] Length = 383 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/323 (31%), Positives = 159/323 (49%), Gaps = 45/323 (13%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKF----IEFGGPDGGSGGRGGDVWIQATSNLNTLID 58 FLD ++ +R G GG G + + F +G + L ++ Sbjct: 24 FLDTLRLAVRGGHGGNGLPKYGGVGGQGGCVYFVAKEGLT--------------LRKVVQ 69 Query: 59 FRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 + A GE K + G +G D + VPVG QV++E LI DL++ + I+A Sbjct: 70 SLKDKRVVASSGEDSSKASIFGRRGVDQRIEVPVGVQVYDERQ-KLIADLNENDAQCIVA 128 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG +F G G+ +I+ L LKLIAD+G++G PNAGKST L + Sbjct: 129 GGGVGGCTGTNFI------------GRPGENRIVNLDLKLIADVGLVGFPNAGKSTLLKA 176 Query: 179 VTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 V+ AKPKIA YPFTT+ P +G ++ + + +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 177 VSNAKPKIAAYPFTTIRPQIGTIEYKDLRSITVADLPGLIEGAHANFGMGHKFLKHIERT 236 Query: 238 HVLLHIVSAL---------EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT 288 +++ +V + A + EL Y+ L +K ++ L+++D + Sbjct: 237 RLMVFMVDIFGFQLSPRHPHRDCLANIYALNRELELYDPSLLEKPSVLLLNKMDKEGAHE 296 Query: 289 LARKK----NELATQCGQVPFEF 307 + K ++LA+ Q P E Sbjct: 297 ILTKVKPIIDDLASGLEQCPEEL 319 >gi|195484560|ref|XP_002090744.1| GE12631 [Drosophila yakuba] gi|194176845|gb|EDW90456.1| GE12631 [Drosophila yakuba] Length = 383 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 113/367 (30%), Positives = 170/367 (46%), Gaps = 64/367 (17%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 FLD ++ +R G GG G + V++ A L ++ Sbjct: 24 FLDNLRLAVRGGHGGNGLPKYGGVGGQGGC------------VYLVAKEGLTLRKVVQGL 71 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + A GE K + G +G D + VPVG QV++ D LI DL++ I+A G Sbjct: 72 KDKRVAASSGEDSSKASIFGRRGLDQRIEVPVGVQVYD-DQQKLIADLNEHAATCIVAGG 130 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG +F G G+ + + L LKLIAD+G++G PNAGKST L +V+ Sbjct: 131 GTGGCTATNFL------------GRPGENRTVNLDLKLIADVGLVGFPNAGKSTLLKAVS 178 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIA YPFTT+ P +G ++ + +AD+PG+I+ AH G+G +FLKH ERT + Sbjct: 179 NAKPKIAAYPFTTIRPQIGTIEYSDLRSITVADLPGLIEGAHANFGMGHKFLKHIERTRL 238 Query: 240 LLHIVSAL-------------EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 L+ +V ENV A + EL Y+ L +K ++ L+++D + Sbjct: 239 LVFMVDIFGFQLSPRHPHRDCLENVYALNK----ELELYDPSLLEKPSVLLLNKMDKEGA 294 Query: 287 DTLARKK----NELATQCGQVPFEF--------------SSITGHGIPQILECLHDKIFS 328 + K N+LA+ Q P E S+I IPQ+ L + Sbjct: 295 HEILTKVKPFINDLASGLEQCPEELRPKQILKFESIVPISAINSSKIPQVKSQLRRTLVR 354 Query: 329 IRGENEF 335 + E +F Sbjct: 355 L-AEKQF 360 >gi|90077190|dbj|BAE88275.1| unnamed protein product [Macaca fascicularis] Length = 231 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 72/202 (35%), Positives = 116/202 (57%), Gaps = 7/202 (3%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N F ++ N+AP PG GQ++++ L+LK +A G++G NAGKS+ L +++ A+P + Sbjct: 17 NRFFLANDNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFSNAGKSSLLRAISNARPAV 76 Query: 187 ADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS 245 A YPFTTL P++GIV EG+++ +ADIPGII+ AHQ G+G FL+H ER LL +V Sbjct: 77 ASYPFTTLKPHVGIVHYEGHQQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVD 136 Query: 246 ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 + + EL Y L ++ + ++ID ++ ++L G+ Sbjct: 137 LSQPEPWTQVDDLKYELEMYEEGLSERPHAIIANKIDLPEARA---NLSQLRDHLGREVI 193 Query: 306 EFSSITGHGIPQI---LECLHD 324 S++TG + Q+ L+ LHD Sbjct: 194 ALSALTGENLEQLLLHLKVLHD 215 >gi|312374793|gb|EFR22276.1| hypothetical protein AND_15519 [Anopheles darlingi] Length = 525 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 94/276 (34%), Positives = 144/276 (52%), Gaps = 35/276 (12%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKF----IEFGGPDGGSGGRGGDVWIQATSNLNTLI 57 +FLD ++ ++ G GG G + + F DG TS + Sbjct: 163 RFLDTLRLTVKGGHGGNGLPKYGGVGGQGGAVYFVAKDG-------------TSLRDVAA 209 Query: 58 DFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIIL 117 F + A +GE+ K G +G D + VP+G +V ++ ++I +LD+ G+ + Sbjct: 210 KFS-NKRVIAGNGEESSKARILGRRGTDQRVEVPLGIRVLDDLEGTVIGELDEAGKNCLA 268 Query: 118 APGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA 177 A GG+GG F G GQ + + L LKLIAD+G++G PNAGKST + Sbjct: 269 AGGGSGGCSGNSFL------------GKAGQLRTLTLDLKLIADVGLVGFPNAGKSTLVK 316 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTER 236 +++RA PKIA YPFTT+ P + ++ E Y++ +AD+PG+I+ AH G+G +FLKH ER Sbjct: 317 AISRASPKIASYPFTTIRPQIATIEYEDYRQITIADLPGLIEGAHANYGMGHKFLKHVER 376 Query: 237 THVLLHIVSALEENVQAAYQ---CILDELSAYNSEL 269 T +LL IV + +Q C L+ + A N EL Sbjct: 377 TRLLLIIVDVFGFQLSPKHQKRNC-LETIYALNREL 411 >gi|225434959|ref|XP_002281079.1| PREDICTED: similar to GTP1/OBG family member [Vitis vinifera] Length = 1383 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 87/237 (36%), Positives = 128/237 (54%), Gaps = 28/237 (11%) Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANP---------------GILGQE 149 + +L +EGQRII+A GG GG GN SS N + G G E Sbjct: 1128 VAELTEEGQRIIVACGGEGGVGN--ISSSKNSRDHKLTKLGAEVSDDDQSSLGIGSPGSE 1185 Query: 150 KIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI 209 I+ L+LK IAD+G++G PNAGKST L +++RAKP + Y FTTL PN+G +K Sbjct: 1186 AILVLELKSIADVGLVGFPNAGKSTLLGAMSRAKPTVGHYAFTTLRPNIGNLKYDDLSIT 1245 Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV---SALE--ENVQAAYQC--ILDEL 262 +ADIPG+IK AH+ G+G FL+H ERT V+ ++V +AL+ + + Q ++ EL Sbjct: 1246 VADIPGLIKGAHENRGLGHAFLRHIERTKVIAYVVDLAAALDGRKGIPPWEQLKDLILEL 1305 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQI 318 Y L + +V ++ID ++ EL + VP F ++ GIP++ Sbjct: 1306 EYYREGLSNRPSLVVANKIDEAGTEEFYE---ELKRRVQGVPIFPVCAVLEEGIPEL 1359 >gi|218505853|gb|ACK77588.1| FI02804p [Drosophila melanogaster] Length = 396 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 144/292 (49%), Gaps = 37/292 (12%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 FLD ++ +R G GG G + V++ A L ++ Sbjct: 37 FLDTLRLAVRGGHGGNGLPKYGGVGGQGGC------------VYLVAKEGLTLRKVVQGL 84 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + A GE K + G +G D + VPVG QV++ D LI DLD+ I+A G Sbjct: 85 KDKRVAASSGEDSSKASIFGRRGADQRIEVPVGVQVYD-DQQKLIADLDEHEATCIVAGG 143 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG +F G G+ + + L LKLIAD+G++G PNAGKST L +V+ Sbjct: 144 GTGGCTATNFL------------GRPGENRTVNLDLKLIADVGLVGFPNAGKSTLLKAVS 191 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIA YPFTT+ P +G ++ + +AD+PG+I+ AH G+G +FLKH ERT + Sbjct: 192 NAKPKIAAYPFTTIRPQIGTIEYRDLRSITVADLPGLIEGAHANFGMGHKFLKHIERTRL 251 Query: 240 LLHIVSAL---------EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 L+ +V + A + EL Y+ L +K ++ L+++D Sbjct: 252 LVFMVDIFGFQLSPKHPHRDCLANVYALNKELELYDPSLLEKPSVLLLNKMD 303 >gi|195345191|ref|XP_002039156.1| GM16989 [Drosophila sechellia] gi|194134286|gb|EDW55802.1| GM16989 [Drosophila sechellia] Length = 383 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 144/292 (49%), Gaps = 37/292 (12%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNT--LIDFR 60 FLD ++ +R G GG G + V++ A L ++ Sbjct: 24 FLDTLRLAVRGGHGGNGLPKYGGVGGQGGC------------VYLVAKEGLTIRKVVQGL 71 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + A GE K + G +G D + VPVG QV++ D LI DLD+ I+A G Sbjct: 72 KDKRVAASSGEDSSKASIFGRRGVDQRIEVPVGVQVYD-DQQKLIADLDEHEATCIVAGG 130 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG +F G G+ + + L LKLIAD+G++G PNAGKST L +V+ Sbjct: 131 GTGGCTANNFL------------GRPGENRTVNLDLKLIADVGLVGFPNAGKSTLLKAVS 178 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIA YPFTT+ P +G ++ + +AD+PG+I+ AH G+G +FLKH ERT + Sbjct: 179 NAKPKIAAYPFTTIRPQIGTIEYRDLRSITVADLPGLIEGAHANFGMGHKFLKHIERTRL 238 Query: 240 LLHIVSAL---------EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 L+ +V + A + EL Y+ L +K ++ L+++D Sbjct: 239 LVFMVDIFGFQLSPRHPHRDCLANVYALNKELELYDPSLLEKPSVLLLNKMD 290 >gi|194879309|ref|XP_001974214.1| GG21611 [Drosophila erecta] gi|190657401|gb|EDV54614.1| GG21611 [Drosophila erecta] Length = 383 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 104/321 (32%), Positives = 161/321 (50%), Gaps = 41/321 (12%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 FLD ++ +R G GG G + V++ A L ++ Sbjct: 24 FLDTLRLAVRGGHGGNGLPKYGGVGGQGGC------------VYLVAKEGLTLRKVVQGL 71 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + A GE K + G +G D + VPVG QV++ D LI DLD+ I+A G Sbjct: 72 KDKRVAASSGEDSSKASIFGRRGVDQRIEVPVGVQVYD-DQQKLIADLDEHEATCIVAGG 130 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG +F G G+ + + L LKLIAD+G++G PNAGKST L +V+ Sbjct: 131 GTGGCTATNFL------------GRPGENRTVNLDLKLIADVGLVGFPNAGKSTLLKAVS 178 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIA YPFTT+ P +G ++ + +AD+PG+I+ AH G+G +FLKH ERT + Sbjct: 179 NAKPKIAAYPFTTIRPQIGTIEYSDLRSITVADLPGLIEGAHANFGLGHKFLKHIERTRL 238 Query: 240 LLHIVS--ALEENVQAAYQCILD-------ELSAYNSELRKKIEIVGLSQIDTVDS-DTL 289 L+ +V + + + ++ LD EL Y+ L +K ++ L+++D + + L Sbjct: 239 LVFMVDIFGFQLSPRHPHRNCLDNVYALNKELELYDPSLLEKPSVLLLNKMDKEGAHEIL 298 Query: 290 ARKK---NELATQCGQVPFEF 307 ++ K N+L + Q P E Sbjct: 299 SKVKPVINDLGSGLEQCPEEL 319 >gi|24585318|ref|NP_609999.2| CG10628 [Drosophila melanogaster] gi|74866639|sp|Q9I7M2|GTPBA_DROME RecName: Full=GTP-binding protein 10 homolog gi|22946874|gb|AAG22443.2| CG10628 [Drosophila melanogaster] Length = 383 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 144/292 (49%), Gaps = 37/292 (12%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 FLD ++ +R G GG G + V++ A L ++ Sbjct: 24 FLDTLRLAVRGGHGGNGLPKYGGVGGQGGC------------VYLVAKEGLTLRKVVQGL 71 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + A GE K + G +G D + VPVG QV++ D LI DLD+ I+A G Sbjct: 72 KDKRVAASSGEDSSKASIFGRRGADQRIEVPVGVQVYD-DQQKLIADLDEHEATCIVAGG 130 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG +F G G+ + + L LKLIAD+G++G PNAGKST L +V+ Sbjct: 131 GTGGCTATNFL------------GRPGENRTVNLDLKLIADVGLVGFPNAGKSTLLKAVS 178 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIA YPFTT+ P +G ++ + +AD+PG+I+ AH G+G +FLKH ERT + Sbjct: 179 NAKPKIAAYPFTTIRPQIGTIEYRDLRSITVADLPGLIEGAHANFGMGHKFLKHIERTRL 238 Query: 240 LLHIVSAL---------EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 L+ +V + A + EL Y+ L +K ++ L+++D Sbjct: 239 LVFMVDIFGFQLSPKHPHRDCLANVYALNKELELYDPSLLEKPSVLLLNKMD 290 >gi|5712728|gb|AAD47628.1| GTP-binding protein-like protein [Pseudomonas sp. BG33R] Length = 208 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 115/199 (57%), Gaps = 1/199 (0%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +++GDGG G +SFRREKFIE GGP+GG GG GG +++ A NLNTL+D+R Sbjct: 1 MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSIYMMADENLNTLVDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Y +HF A+ G G + +G KGED+VL VPVGT + + +I DL + G ++++ G Sbjct: 61 YTRHFDAERGSNGGSTDCTGEKGEDLVLRVPVGTTIIDSPTQEVIGDLTKAGHKLMVVHG 120 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G F SSTN+AP PG G+ + + L + + P L + Sbjct: 121 GWHXLCXTXFXSSTNRAPRXTTPGXPGEXRDLKLXNXNYSPTFCLVWPAQXPXKXLHPLX 180 Query: 181 -RAKPKIADYPFTTLYPNL 198 + + PFTTL PNL Sbjct: 181 IXRQXQSLPXPFTTLVPNL 199 >gi|195580261|ref|XP_002079971.1| GD21736 [Drosophila simulans] gi|194191980|gb|EDX05556.1| GD21736 [Drosophila simulans] Length = 383 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 144/292 (49%), Gaps = 37/292 (12%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS--NLNTLIDFR 60 FLD ++ +R G GG G + V++ A L ++ Sbjct: 24 FLDTLRLAVRGGHGGNGLPKYGGVGGQGGC------------VYLVAKEGLTLRKVVQGL 71 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 + A GE K + G +G D + VPVG QV++ D LI DLD+ I+A G Sbjct: 72 KDKRVAASSGEDSSKASIFGRRGVDQRIEVPVGVQVYD-DQQKLIADLDEHEATCIVAGG 130 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG +F G G+ + + L LKLIAD+G++G PNAGKST L +V+ Sbjct: 131 GTGGCTATNFL------------GRPGENRTVNLDLKLIADVGLVGFPNAGKSTLLKAVS 178 Query: 181 RAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 AKPKIA YPFTT+ P +G ++ + +AD+PG+I+ AH G+G +FLKH ERT + Sbjct: 179 NAKPKIAAYPFTTIRPQIGTIEYRDLRSITVADLPGLIEGAHANFGMGHKFLKHIERTRL 238 Query: 240 LLHIVSAL---------EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 L+ +V + A + EL Y+ L +K ++ L+++D Sbjct: 239 LVFMVDIFGFQLSPRHPHRDCLANVYALNKELELYDPSLLEKPSVLLLNKMD 290 >gi|195053114|ref|XP_001993475.1| GH13046 [Drosophila grimshawi] gi|193900534|gb|EDV99400.1| GH13046 [Drosophila grimshawi] Length = 383 Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 96/274 (35%), Positives = 142/274 (51%), Gaps = 34/274 (12%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKF----IEFGGPDGGSGGRGGDVWIQATSNLNTLID 58 FLD ++ +R G GG G + + F +G + + +L D Sbjct: 24 FLDTLRLTVRGGHGGNGLPKYGGVGGQGGCVYFVAKEGHTLRKVA----------QSLKD 73 Query: 59 FRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 R A GE K + G +G D + VPVG QV++E L+ DL+++ I+A Sbjct: 74 KRVH----ATSGEDSSKLSIFGRRGGDQRIEVPVGVQVYDEQH-KLLADLNEDEASCIVA 128 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG +F G G+ +I+ L LKLIAD+G++G PNAGKST L + Sbjct: 129 GGGTGGCTGNNFL------------GRPGESRIVNLDLKLIADVGLVGFPNAGKSTLLKA 176 Query: 179 VTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 ++ AKPKIA YPFTT+ P +G ++ + LAD+PG+I+ AH G+G +FLKH ERT Sbjct: 177 ISNAKPKIAAYPFTTIRPQIGTIEYSDLRSISLADLPGLIEGAHANFGMGHKFLKHIERT 236 Query: 238 HVLLHIVS--ALEENVQAAYQCILDELSAYNSEL 269 +LL IV + + + ++ L + A N EL Sbjct: 237 RLLLFIVDIFGFQLSPRHPHRDCLANIYALNKEL 270 >gi|222616444|gb|EEE52576.1| hypothetical protein OsJ_34863 [Oryza sativa Japonica Group] Length = 512 Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 83/229 (36%), Positives = 125/229 (54%), Gaps = 21/229 (9%) Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 + ++ + GQR+I+A GG ST G G E + L+LK IAD+G+ Sbjct: 278 VAEMTKPGQRLIIARGGEAHKEEEMASLST---------GHPGTETYLILELKSIADVGL 328 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQG 223 +G+PNAGKST L++++RA+P+IADY FTTL PN+G + E Y +ADIPG+IK AH+ Sbjct: 329 VGMPNAGKSTLLSALSRARPEIADYAFTTLRPNIGSLTYEDYFSVKVADIPGLIKGAHEN 388 Query: 224 AGIGDRFLKHTERTHVLLHIVSAL-----EENVQAAYQC--ILDELSAYNSELRKKIEIV 276 G+G FL+H ERT VL +++ + V Q ++ EL Y L K+ ++ Sbjct: 389 RGLGHAFLRHIERTKVLAYVLDLAATLNGRKGVPPWEQLRDLVVELEHYQEGLTKRPSLI 448 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHD 324 ++ID +D + EL + VP F +I G+P + L D Sbjct: 449 VANKIDEEGADEMY---EELKKRVQGVPMFPICAILQEGVPDLRVGLRD 494 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 4/100 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR-Y 61 +D ++ + GDGG G IS RR + G PDGG+GGRGGDV ++ + ++ DF Sbjct: 46 MVDRFRLRAKGGDGGNGCISLRRSRSDRQGKPDGGNGGRGGDVILECS---RSVWDFSGL 102 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDG 101 Q H KA G G+ +N+ G +G D + VPVGT + +G Sbjct: 103 QHHMKASRGANGVSKNQIGTRGSDKIAQVPVGTVIHLVEG 142 >gi|146332309|gb|ABQ22660.1| GTP-binding protein 5-like protein [Callithrix jacchus] Length = 209 Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 71/194 (36%), Positives = 112/194 (57%), Gaps = 6/194 (3%) Query: 135 NQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL 194 N+AP PG GQ++++ L+LK +A G++G PNAGKS+ L +++ A+P +A YPFTTL Sbjct: 3 NRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRALSNARPAVASYPFTTL 62 Query: 195 YPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA 253 P++GIV EG+++ +ADIPG+I+ AHQ G+G FL+H ER LL +V Sbjct: 63 KPHVGIVHYEGHQQIAVADIPGLIRGAHQNRGLGSAFLRHIERCCFLLFVVDLSLPEPWT 122 Query: 254 AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGH 313 + EL Y L ++ + ++ID ++ ++L GQ S++TG Sbjct: 123 QVDDLKYELEMYEEGLFERPHAIVANKIDLPEAQA---NLSQLRDHMGQEVIALSAVTGE 179 Query: 314 GIPQILECLHDKIF 327 + Q+L LH K+ Sbjct: 180 NLEQLL--LHLKVL 191 >gi|328718052|ref|XP_003246370.1| PREDICTED: GTP-binding protein 10 homolog isoform 2 [Acyrthosiphon pisum] Length = 322 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 81/218 (37%), Positives = 125/218 (57%), Gaps = 19/218 (8%) Query: 55 TLIDFRYQ---QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQE 111 TL DF + + +A+ G R G GED + VP G V+++ + LI +L++ Sbjct: 2 TLKDFLKKYPLKKLRAEMGGNSHSRRILGQIGEDKKVNVPTGITVYDDKNV-LIGELNEP 60 Query: 112 GQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAG 171 +I+ + TN Y G+ G+ K I L+LKLIADIG++G PNAG Sbjct: 61 DSELIVG-------KGGVGGNKTNG---YC--GLKGESKSIKLELKLIADIGLVGFPNAG 108 Query: 172 KSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRF 230 KST L +++ AKPKIA YPFTT+ PN+G++ + ++ +AD+PG+I+ AH G+G RF Sbjct: 109 KSTLLKAISNAKPKIASYPFTTIRPNIGVMTYDDLRQISMADLPGLIEGAHCNIGMGHRF 168 Query: 231 LKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYN 266 L+H ERT +LL +V + + N + ++ LD + N Sbjct: 169 LRHVERTKLLLLVVDINGFQLNPKHQFRSCLDTVVLLN 206 >gi|307136389|gb|ADN34199.1| mitochondrial GTPase [Cucumis melo subsp. melo] Length = 521 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/166 (40%), Positives = 98/166 (59%), Gaps = 21/166 (12%) Query: 99 EDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYA----------------- 141 E+ + + +L +EGQ++I+A GG GG GN H + ++ P + Sbjct: 234 EEMMYNVAELTEEGQQVIIARGGEGGLGNVH-EHKLSKKPKTSVGHEDESIDSNLSEINV 292 Query: 142 ---NPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL 198 G LG E ++ L+LK IAD+G +G+PNAGKST L +++RAKP + Y FTTL PNL Sbjct: 293 SNRRTGSLGSEAVLVLELKSIADVGFVGMPNAGKSTLLGAISRAKPTVGHYAFTTLRPNL 352 Query: 199 GIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G + +ADIPG+IK AH+ G+G FL+H ERT VL +++ Sbjct: 353 GNLHYDDLSITVADIPGLIKGAHENRGLGHSFLRHIERTRVLAYVL 398 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 4/88 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR- 60 + +D KVY + GDGG G S RR + +G PDGG GGRGGDV ++ ++ L DF Sbjct: 48 RMIDRFKVYAKGGDGGNGCQSMRRSRHERYGHPDGGDGGRGGDVILECST---ALWDFST 104 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVL 88 H KA G G +N+ G KG D V+ Sbjct: 105 LNHHIKASRGGHGSSKNKIGTKGADKVV 132 >gi|255642054|gb|ACU21293.1| unknown [Glycine max] Length = 319 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 66/159 (41%), Positives = 91/159 (57%), Gaps = 19/159 (11%) Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYA-------------------NPGI 145 + +L +EGQ+I++A GG GG GN + + A G Sbjct: 58 VAELTEEGQQIVIARGGEGGLGNVSCVKDSRKPVTMAFSCQHMDNVQDPDSVLSSQQAGS 117 Query: 146 LGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY 205 G E ++ L+LK IAD+ +G+PNAGKST L +++RAKP + DY FTTL PNLG + Sbjct: 118 PGSETVLILELKSIADVSFVGMPNAGKSTLLGAISRAKPAVGDYAFTTLRPNLGNLNYDD 177 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 +ADIPG+IK AHQ G+G FL+H ERT VL ++V Sbjct: 178 LSITVADIPGLIKGAHQNRGLGHAFLRHIERTKVLAYVV 216 >gi|255584240|ref|XP_002532858.1| Mitochondrial GTPase, putative [Ricinus communis] gi|223527395|gb|EEF29536.1| Mitochondrial GTPase, putative [Ricinus communis] Length = 417 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 68/161 (42%), Positives = 99/161 (61%), Gaps = 21/161 (13%) Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQA--------------PYYANP------- 143 + +L + GQ+II+A GG+GG GNA + + +A P ++ Sbjct: 239 VAELTKPGQKIIIAHGGDGGLGNASSLNVSKKAKTAKLGVNKDITFDPEISSEYQSSLSL 298 Query: 144 GILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE 203 G G E ++ L+LK IAD+G++G+PNAGKST L +++RAKP++ Y FTTL PNLG +K Sbjct: 299 GCPGSEAVLVLELKSIADVGLVGMPNAGKSTLLGALSRAKPRVGHYSFTTLRPNLGKLKF 358 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 +ADIPG+IK AH+ G+G FL+H ERT VL ++V Sbjct: 359 DDLSITVADIPGLIKGAHENRGLGHAFLRHIERTKVLAYVV 399 Score = 35.8 bits (81), Expect = 8.7, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 4/96 (4%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR- 60 + D + + G GG G SFRR + G PDGG+GGRGGDV ++ + + DF Sbjct: 57 RMRDRFMLNAKGGHGGNGCSSFRRSRHDRCGRPDGGNGGRGGDVILECSP---AIWDFSG 113 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 H A G G +N G +GED V+ VP+GT + Sbjct: 114 LHHHVNAAKGGHGGSKNMIGTRGEDKVVQVPIGTVI 149 >gi|320174547|gb|EFW49683.1| GTPase ObgE [Shigella dysenteriae CDC 74-1112] Length = 234 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/133 (48%), Positives = 96/133 (72%), Gaps = 6/133 (4%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGI 216 L+AD+G++G+PNAGKSTF+ +V+ AKPK+ADYPFTTL P+LG+V+ + K F++ADIPG+ Sbjct: 2 LLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGL 61 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELRKK 272 I+ A +GAG+G RFLKH ER VLLH++ + V+ A + I+ EL Y+ +L K Sbjct: 62 IEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENA-RIIISELEKYSQDLAAK 120 Query: 273 IEIVGLSQIDTVD 285 + ++ID +D Sbjct: 121 PRWLVFNKIDLLD 133 >gi|269958632|ref|YP_003328419.1| putative GTPase [Anaplasma centrale str. Israel] gi|269848461|gb|ACZ49105.1| putative GTPase [Anaplasma centrale str. Israel] Length = 157 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 71/138 (51%), Positives = 99/138 (71%) Query: 49 ATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDL 108 A++ +NTL+ FRY QH +A++G+ G + + GA G D V+ VPVGTQ+++E G LI DL Sbjct: 5 ASNAVNTLLYFRYNQHIRAENGKPGSGKGKFGAAGRDRVVEVPVGTQLYDEHGDDLIADL 64 Query: 109 DQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLP 168 + GQR I A GG GG GNA +KSSTN+AP Y G G+E + LKLK+++D+GIIG+P Sbjct: 65 NSVGQRHIAAAGGRGGVGNAQYKSSTNRAPTYFTYGTPGEEHCVLLKLKIVSDVGIIGMP 124 Query: 169 NAGKSTFLASVTRAKPKI 186 NAGKS+ L+ T +K K+ Sbjct: 125 NAGKSSLLSRCTASKTKV 142 >gi|298713775|emb|CBJ27147.1| Mtg2, mitochondrial Obg/CtgA-like GTPase [Ectocarpus siliculosus] Length = 494 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 77/224 (34%), Positives = 121/224 (54%), Gaps = 13/224 (5%) Query: 102 ISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIAD 161 + + DL+++G +++LA GG G GN H S PG G+ + +L+ IAD Sbjct: 210 VRYVADLEKDGDKVLLASGGKPGLGNLHVASRRVGTKI---PGQRGESRHYRFELRTIAD 266 Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI---LADIPGIIK 218 +G++G PNAGKST L +T AKPK+A YPFTTL P +G V+ Y + I +ADIPG+I Sbjct: 267 VGLVGYPNAGKSTLLGCITSAKPKVAMYPFTTLTPVVGHVE--YSDTIRLRVADIPGLID 324 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL---DELSAYNSELRKKIEI 275 AH+ G+G FL+H RT L+ +V A + ++ +EL Y+ EL K Sbjct: 325 GAHRNRGLGHEFLRHVSRTRALMFVVDAAGSEGRDPVDDLMSLKEELRLYDGELAGKPAF 384 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 V ++ D +++ + A VP S++ G+ +++ Sbjct: 385 VVANKTDLQETEGHLERLRSAAGPLPVVP--ISALESRGLLELV 426 >gi|224082930|ref|XP_002306896.1| predicted protein [Populus trichocarpa] gi|222856345|gb|EEE93892.1| predicted protein [Populus trichocarpa] Length = 240 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 85/228 (37%), Positives = 120/228 (52%), Gaps = 42/228 (18%) Query: 39 GGRGGDVWIQATSNLNTLIDFRYQQHFKAQHG----EKGM--KRNRSGAKGEDVVLTVPV 92 GG GGDV I A ++L++ + F A+ G G+ + +G + + VPV Sbjct: 36 GGHGGDVVIYADEGKDSLLELHSKSRFNAKRGGNVDAMGVLTYQLHNGFDASTLRIPVPV 95 Query: 93 GTQVFEEDGISLICDL--DQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEK 150 + +E ++L + D + +IL G G+E Sbjct: 96 APERRKERLMALTTNAMRDDSDKVLIL--------------------------GQTGEEV 129 Query: 151 IIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG------IVKEG 204 + L L+++AD+G++GLPNAGKST LAS+T AKP IADYPFTTL PNLG + G Sbjct: 130 SLELILQVVADVGLVGLPNAGKSTLLASITLAKPDIADYPFTTLMPNLGRHNGDPTLGAG 189 Query: 205 Y--KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 E LAD+PG+I+ AH G G+G FLKH RTHVL+H+V A E+ Sbjct: 190 MYSSEATLADLPGLIECAHLGKGLGRNFLKHLRRTHVLVHVVDAAAED 237 >gi|108711582|gb|ABF99377.1| GTP1/OBG family protein, expressed [Oryza sativa Japonica Group] Length = 382 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 94/276 (34%), Positives = 134/276 (48%), Gaps = 55/276 (19%) Query: 2 KFLDEAKVYIRSGDGGAGGI-------------SFRRE---------KFIEFGGPDGGS- 38 K+ D A V +R+GDGG G + S RR K + + GS Sbjct: 74 KYFDHAVVTVRAGDGGHGAVLAMPASPSTDAPKSPRRRSDKGKRSGVKKVSYKRNYDGSV 133 Query: 39 ----GGRGGDVWIQATSNLNTLIDFRYQQHFKAQHG----EKGM--KRNRSGAKGEDVVL 88 GG GGDV + A TL+ F + + A+ G G R +G GE + + Sbjct: 134 ALPMGGHGGDVVVYADEAEETLLRFHEKARYCAKRGGNVGATGTLSSRMHNGFAGETLRI 193 Query: 89 TVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGIL-- 146 VPVGT V + G +++ DL G +I+A GG GG + +P I+ Sbjct: 194 PVPVGTVVKRKKG-AVLADLAHPGDEVIVARGGQGGISLIDVPEYRRRKAMVLSPNIMRD 252 Query: 147 -----------GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLY 195 G+E + L L+++AD+G++GLPNAGKST L+++T A+P IADYPFTTL Sbjct: 253 VSDRVLIHGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLSAITLARPDIADYPFTTLM 312 Query: 196 PNLGIVK--------EGYKEFILADIPGIIKNAHQG 223 PNLG + + E LAD+PG+I+ AH G Sbjct: 313 PNLGRLGGDPALGALQFSSEATLADLPGLIEGAHLG 348 >gi|316974774|gb|EFV58247.1| Spo0B-associated GTP-binding protein [Trichinella spiralis] Length = 238 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 86/266 (32%), Positives = 135/266 (50%), Gaps = 50/266 (18%) Query: 5 DEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQA--TSNLNTLIDFRYQ 62 D ++Y+R G GG G EK+ G GG GGDV+++ ++ L+ L Sbjct: 12 DHLRIYVRGGSGGKG-----LEKY-------GAIGGDGGDVYLEVNESATLHALAKSNPS 59 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 + F A G K G KG+D+V++VP G V +DG L+ +LD G R+++A Sbjct: 60 KRFIAGKGSDSGKFRIFGEKGQDLVISVPKGISVTTDDG-KLLGNLDHHGDRMLVAI--- 115 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 + + G+ G+ II L LKLIADIG++G PNAGKST L +++RA Sbjct: 116 ---------GGEGGSSKSSYGGLKGEPHIIRLDLKLIADIGLLGFPNAGKSTLLKALSRA 166 Query: 183 KPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 KP+IA+YP+ +PG+I+ ++ G+G +FLKH ERT++LL Sbjct: 167 KPRIANYPY---------------------LPGLIEGSYMNVGMGHKFLKHVERTYLLLF 205 Query: 243 IVS--ALEENVQAAYQCILDELSAYN 266 ++ + N + ++ L+ N Sbjct: 206 VIDIRGFQLNAASPFRSALENYLLLN 231 >gi|224533405|ref|ZP_03673999.1| putative small GTP-binding protein domain protein [Borrelia burgdorferi CA-11.2a] gi|224513570|gb|EEF83927.1| putative small GTP-binding protein domain protein [Borrelia burgdorferi CA-11.2a] Length = 178 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 59/131 (45%), Positives = 92/131 (70%) Query: 152 IWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA 211 + L+L L+ADIG++GLPNAGKS+ L +T AK ++A+YPFTT P+LG+++ Y + I+A Sbjct: 3 VRLELFLVADIGLVGLPNAGKSSLLNRITSAKSRVANYPFTTKIPHLGMLRRSYDDLIIA 62 Query: 212 DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 DIPGIIK A G G+G +FLKH +T +L ++ E N +Y +L+EL +Y+ +L Sbjct: 63 DIPGIIKGASFGVGLGTKFLKHIAKTKILALVIDISEANFLESYNILLNELKSYSHKLFN 122 Query: 272 KIEIVGLSQID 282 K +I+ +++D Sbjct: 123 KKKIIIANKLD 133 >gi|147782291|emb|CAN60824.1| hypothetical protein VITISV_037057 [Vitis vinifera] Length = 484 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 106/327 (32%), Positives = 155/327 (47%), Gaps = 63/327 (19%) Query: 2 KFLDEAKVYIRSGDGGAGGI-SFRREKFIEFGGPDGGSGGRGGD---------------- 44 K+ D+ + +RSGDGG G I S ++ P G D Sbjct: 80 KYFDQVLITVRSGDGGHGAILSMPNQR-----APSKPQGKHDKDKMRKKSSYKRDFDGSL 134 Query: 45 ----------VWIQATSNLNTLIDFRYQQHFKAQHG----EKGMKRNR--SGAKGEDVVL 88 V I A ++L++F + A+ G G+ ++ G + + Sbjct: 135 ILPXGGHGGGVIIYADEGEDSLLEFHKKSRHNAKRGGNVDAMGVLTSQLHDGLAAPTLRI 194 Query: 89 TVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFG--------NAHFKSSTNQAPYY 140 VPVGT V + G L+ DL Q G I++A GG GG + T Sbjct: 195 PVPVGTVVKRKRG-KLLADLAQPGDEILVARGGQGGISLIEMPEHKRKKLMALTTNXMRD 253 Query: 141 ANPGIL-----GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLY 195 N +L G+E + L L+++AD+G++GLPNAGKST LA++T AKP IADYPFTTL Sbjct: 254 DNDKVLILGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLAAITLAKPDIADYPFTTLM 313 Query: 196 PNLGIVK--------EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 PNLG + + E LAD+PG+I+ AH G G+G FL+H RT +L+H+V A Sbjct: 314 PNLGRLDGDPSLGAGKYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAA 373 Query: 248 EENVQAAYQCI---LDELSAYNSELRK 271 E+ Y+ + +D L + E+ K Sbjct: 374 AEDPVKDYRTVKEAMDRLPSLTQEIMK 400 >gi|195384999|ref|XP_002051196.1| GJ14682 [Drosophila virilis] gi|194147653|gb|EDW63351.1| GJ14682 [Drosophila virilis] Length = 383 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 92/274 (33%), Positives = 139/274 (50%), Gaps = 34/274 (12%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKF----IEFGGPDGGSGGRGGDVWIQATSNLNTLID 58 FLD ++ +R G GG G + + F +G + L L Sbjct: 24 FLDTLRLTVRGGHGGNGLPKYGGVGGQGGCVYFVAKEGLT--------------LRKLAQ 69 Query: 59 FRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 + +A GE K + G +G D + VP+G QV++E L+ DL++ I+A Sbjct: 70 NLRDKRVQATSGEDSSKVSIFGRRGVDQRIEVPLGVQVYDEQQ-KLLADLNEHEASCIVA 128 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG +F G G+ + + L LKLIAD+G++G PNAGKST L + Sbjct: 129 GGGTGGCTGNNFL------------GRPGESRTVHLDLKLIADVGLVGFPNAGKSTLLKA 176 Query: 179 VTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 ++ AKPKIA YPFTT+ P +G V+ + +AD+PG+I+ AH G+G +FLKH ERT Sbjct: 177 ISNAKPKIAAYPFTTIRPQIGTVEYSDLRSISIADLPGLIEGAHANFGMGHKFLKHIERT 236 Query: 238 HVLLHIVS--ALEENVQAAYQCILDELSAYNSEL 269 +LL +V + + + ++ L + A N EL Sbjct: 237 RLLLFMVDIFGFQLSPRHPHRDCLSNIYALNKEL 270 >gi|328875786|gb|EGG24150.1| GTP1/OBG family protein [Dictyostelium fasciculatum] Length = 692 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 68/175 (38%), Positives = 100/175 (57%), Gaps = 31/175 (17%) Query: 112 GQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAG 171 G+ I+L GG GG GNA+F + N++P YA PG+ G +K L+LK+IAD+G++G PNAG Sbjct: 288 GEEIVLLQGGRGGKGNANFATGRNRSPEYAQPGLKGGDKYFELELKIIADVGLVGYPNAG 347 Query: 172 KSTFLASVTRAKPKIADYPFTTLYPNLGIV------------------------------ 201 KST L+ V+ A PKI +Y FTTL+P +G++ Sbjct: 348 KSTLLSRVSNAIPKIRNYAFTTLHPYVGVMDFPHVIDRTIKLSRRGRGGDGSAGSSSVEK 407 Query: 202 -KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY 255 K ++ +AD+PGI++ AH G+G FLKH ERT VL +++ E V + + Sbjct: 408 AKGKLEKATMADLPGILEGAHLNIGLGLDFLKHIERTKVLCYVIDMSNEGVPSLW 462 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 61/98 (62%), Gaps = 2/98 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F+D+ ++ ++GDGGAG ++F R K+I G PDGG+GG G + I++ + N L Sbjct: 121 LSFMDKIRIKCKAGDGGAGCVNFFRAKYIPLGPPDGGNGGNGASIIIRSDLHENNLAHL- 179 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 ++H+ GEKG ++G G+D+++ VP GT + E Sbjct: 180 -ERHYVGDSGEKGKGAKKTGKDGDDIIIHVPPGTIIRE 216 >gi|294935470|ref|XP_002781428.1| Spo0B-associated GTP-binding protein, putative [Perkinsus marinus ATCC 50983] gi|239892071|gb|EER13223.1| Spo0B-associated GTP-binding protein, putative [Perkinsus marinus ATCC 50983] Length = 308 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 108/293 (36%), Positives = 169/293 (57%), Gaps = 20/293 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRRE---KFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDF 59 +D +V +RSG GGAG +S+ + K G P GG+GGRGGDV +A N+ +L + Sbjct: 21 LVDRRRVEVRSGQGGAGHVSYIKHVSPKLFGPGVPAGGNGGRGGDVIFKADPNVISLTNV 80 Query: 60 RYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVF---EEDG--ISLICDLDQEGQR 114 + +A G KG R SG +V+ VP+G V +EDG ++ DL++ Q Sbjct: 81 --PRVARAMDGGKGRNRKISGKNASPLVVKVPLGVVVSTEPQEDGEKSVVLADLNKAEQS 138 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 I A GG GG GN P+ G G+ K + L+LK IAD+G++G PNAGKS+ Sbjct: 139 YIAAFGGAGGHGNVVLDH-----PHDFTVGDCGEVKHLILELKSIADVGLVGFPNAGKSS 193 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE---FILADIPGIIKNAHQGAGIGDRFL 231 L ++T+A+PKIA YPFTTL P+LG ++ + +++AD+PG+++ AH G+G +FL Sbjct: 194 LLRALTKARPKIASYPFTTLAPHLGTLRFTDDQDGGYVIADLPGLVEGAHDNVGLGHQFL 253 Query: 232 KHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 +H +RT LL++V S + + + + E+ Y+ E+ + IV +++ D Sbjct: 254 RHIQRTTALLYVVDGSLGADAALSTLRALQLEVKLYSGEMADRPFIVLVNKCD 306 >gi|320174548|gb|EFW49684.1| GTPase ObgE [Shigella dysenteriae CDC 74-1112] Length = 147 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 73/139 (52%), Positives = 101/139 (72%), Gaps = 2/139 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVWI+A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWIEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GNGGFGNAHFKSSTNQAPY 139 G G GN FKSS N PY Sbjct: 121 GWHGLGNTRFKSSVN--PY 137 >gi|294890753|ref|XP_002773297.1| Spo0B-associated GTP-binding protein, putative [Perkinsus marinus ATCC 50983] gi|239878349|gb|EER05113.1| Spo0B-associated GTP-binding protein, putative [Perkinsus marinus ATCC 50983] Length = 388 Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 103/279 (36%), Positives = 157/279 (56%), Gaps = 18/279 (6%) Query: 3 FLDEAKVYIRSGDGGAGGISFRRE---KFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDF 59 +D +V +RSG GGAG +S+ + K G P GG+GGRGGDV +A N+ +L + Sbjct: 21 LVDRRRVEVRSGQGGAGHVSYIKHVSPKLFGPGVPAGGNGGRGGDVIFKADPNVISLTNV 80 Query: 60 RYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPV----GTQVFEEDGISLI-CDLDQEGQR 114 + +A G KG R SG +V+ VP+ T+ E+ S++ DL++ Q Sbjct: 81 --PRVARAMDGGKGRNRKISGKNASPLVVKVPLGVVVSTEPREDREKSVVLADLNKAEQS 138 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 A GG GG GN P+ G G+ K + L+LK IAD+G++G PNAGKS+ Sbjct: 139 YTAAFGGAGGHGNVVLDH-----PHDFTVGDCGEVKHLILELKSIADVGLVGFPNAGKSS 193 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE---FILADIPGIIKNAHQGAGIGDRFL 231 L ++T+A+PK+A YPFTTL P+LG ++ + +++AD+PG+++ AH G+G +FL Sbjct: 194 LLRALTKARPKVASYPFTTLAPHLGTLRFTDDQDGGYVIADLPGLVEGAHDNVGLGHQFL 253 Query: 232 KHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR 270 +H +RT LL++V L A L L A E++ Sbjct: 254 RHIQRTTALLYVVGLLPLPQSAPSTLALSTLRALQLEVK 292 >gi|297746085|emb|CBI16141.3| unnamed protein product [Vitis vinifera] Length = 501 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 83/222 (37%), Positives = 125/222 (56%), Gaps = 20/222 (9%) Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 + +L +EGQRII+A GG G S +Q+ G G E I+ L+LK IAD+G+ Sbjct: 232 VAELTEEGQRIIVACGGEG-------VSDDDQSSL--GIGSPGSEAILVLELKSIADVGL 282 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGA 224 +G PNAGKST L +++RAKP + Y FTTL PN+G +K +ADIPG+IK AH+ Sbjct: 283 VGFPNAGKSTLLGAMSRAKPTVGHYAFTTLRPNIGNLKYDDLSITVADIPGLIKGAHENR 342 Query: 225 GIGDRFLKHTERTHVLLHIV---SALE--ENVQAAYQC--ILDELSAYNSELRKKIEIVG 277 G+G FL+H ERT V+ ++V +AL+ + + Q ++ EL Y L + +V Sbjct: 343 GLGHAFLRHIERTKVIAYVVDLAAALDGRKGIPPWEQLKDLILELEYYREGLSNRPSLVV 402 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQI 318 ++ID ++ EL + VP F ++ GIP++ Sbjct: 403 ANKIDEAGTEEFY---EELKRRVQGVPIFPVCAVLEEGIPEL 441 >gi|254509381|ref|ZP_05121466.1| GTP1/Obg family protein [Vibrio parahaemolyticus 16] gi|219547689|gb|EED24729.1| GTP1/Obg family protein [Vibrio parahaemolyticus 16] Length = 245 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 65/130 (50%), Positives = 91/130 (70%), Gaps = 6/130 (4%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIK 218 AD+G++GLPNAGKSTF+ +V+ AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ Sbjct: 15 ADVGMLGLPNAGKSTFIRAVSAAKPKVADYPFTTLIPSLGVVSVVPEKSFVVADIPGLIE 74 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIE 274 A GAG+G RFLKH ER VLLH++ + + VQ A I+DEL Y+ +L K Sbjct: 75 GAADGAGLGIRFLKHLERCRVLLHMIDIMPIDQSDPVQNAL-TIIDELEQYSEKLADKPR 133 Query: 275 IVGLSQIDTV 284 + +++D + Sbjct: 134 WLIFNKVDLM 143 >gi|159472719|ref|XP_001694492.1| predicted protein [Chlamydomonas reinhardtii] gi|158276716|gb|EDP02487.1| predicted protein [Chlamydomonas reinhardtii] Length = 387 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 101/325 (31%), Positives = 152/325 (46%), Gaps = 18/325 (5%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 K DE + ++SG GG G + + G +GG+ + + T R Sbjct: 73 KVFDEIVINVKSGAGGNGEVCDPGVDSLLHLHAGGNTGGKRAAGGAKGDAGRPTFA-ARD 131 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPV--GTQVFEEDGISLICDLDQEGQRIILAP 119 + G G KRN K + L +PV GT V + +L+ +L Q GQR++ Sbjct: 132 GSNANPNTGSGGPKRNAEIKKAKTPALEIPVPPGTVVKRKGTGALMGELMQPGQRLV--- 188 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 N G S + PG Q+ + L L+++AD+G++G PNAGKS+ L S+ Sbjct: 189 --NKGVEVVEVDDSGWREDVKGQPG---QQLGLTLLLRVVADVGLVGFPNAGKSSLLKSL 243 Query: 180 TRAKPKIADYPFTTLYPNLGIVKE--GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 TRA P IA YPFTTL PNLG++ G + +LAD+PG AH+G G+G FL+H RT Sbjct: 244 TRASPTIAPYPFTTLMPNLGVLSAGGGASKAVLADLPG----AHKGRGLGRNFLRHLRRT 299 Query: 238 HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 LLH+V A + Y + +EL YN + + + + + A E Sbjct: 300 SALLHVVDASAPDPVTDYYAVREELRMYNPDYCARPHVAAIRGAAQAQAAEHAEHAYEGP 359 Query: 298 TQCGQVPF-EFSSITGHGIPQILEC 321 T G + + TG G+ ++ C Sbjct: 360 TPVGPLSIVPCCAATGEGLKELGAC 384 >gi|326921738|ref|XP_003207113.1| PREDICTED: GTP-binding protein 10-like [Meleagris gallopavo] Length = 289 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 83/245 (33%), Positives = 128/245 (52%), Gaps = 42/245 (17%) Query: 107 DLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIG 166 +L++ G+R + A GG GG +TN P GQ +I+ L LKLIAD+G++G Sbjct: 25 ELNRAGERFLAARGGLGG------SLATNFLPCK------GQRRIVHLDLKLIADVGLVG 72 Query: 167 LPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAG 225 PNAGKS+ L+ +++AKP+IA+Y FTT+ P LG I+ E +K+ ++AD+PG+I+ AH+ G Sbjct: 73 FPNAGKSSLLSKISQAKPEIANYAFTTIQPELGKIMYEDFKQILVADLPGLIEGAHRNKG 132 Query: 226 IGDRFLKHTERTHVLLHIVS------ALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 G +FLKH ERT LL +V + + + A++ +L + + L Sbjct: 133 RGHKFLKHVERTKHLLLVVDISGFQLSSKTQFRTAFETVLLLTKELELYNEELLTKPALL 192 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEF----------------------SSITGHGIPQ 317 I+ +D NEL Q Q P +F S+ TG GI + Sbjct: 193 AINKMDLPCANDNLNELMKQL-QNPEDFLHLLKEEVIPENTIDFRDIIPISTYTGEGIEE 251 Query: 318 ILECL 322 + EC+ Sbjct: 252 LKECV 256 >gi|296118767|ref|ZP_06837343.1| GTP-binding protein [Corynebacterium ammoniagenes DSM 20306] gi|295968256|gb|EFG81505.1| GTP-binding protein [Corynebacterium ammoniagenes DSM 20306] Length = 351 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/185 (37%), Positives = 106/185 (57%), Gaps = 18/185 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +AD+G++G P+AGKS+ ++ ++ AKPKI DYPFTTL PNLG+V G F +AD+PG+I Sbjct: 1 MADVGLVGFPSAGKSSLISVLSAAKPKIGDYPFTTLQPNLGVVDMGDSSFTIADVPGLIP 60 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNS------- 267 A G G+G FL+H ERT VL H+V + Q+ + + EL++Y S Sbjct: 61 GAADGKGLGLDFLRHIERTAVLAHVVDTASIEPGRDPQSDIEALEKELASYQSALDADTG 120 Query: 268 --ELRKKIEIVGLSQIDTVDSDTLAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 +LR + I+ L++ D +++ LA K +L Q G F S++ G LE L Sbjct: 121 LGDLRDRQRIIILNKADVPEAEELAEFVKEDLEEQFGWPVFIISAVARKG----LEPLKY 176 Query: 325 KIFSI 329 K+ + Sbjct: 177 KLLEM 181 >gi|260945441|ref|XP_002617018.1| hypothetical protein CLUG_02462 [Clavispora lusitaniae ATCC 42720] gi|238848872|gb|EEQ38336.1| hypothetical protein CLUG_02462 [Clavispora lusitaniae ATCC 42720] Length = 443 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/150 (40%), Positives = 96/150 (64%), Gaps = 2/150 (1%) Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 +++ GG GG GN HF ++ + P ++ G G + L+LKLIAD+G++GLPNAGKS+ Sbjct: 228 VLILRGGKGGMGNMHFLTTNVRNPRFSKKGRQGLCEYFILELKLIADLGLVGLPNAGKSS 287 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLK 232 L ++++A+P++ + FTTL P +G + + F +ADIPGIIK A + G+G FL+ Sbjct: 288 LLRAISKARPRVGHWEFTTLQPTIGTIFTTIDKDPFTVADIPGIIKGASENRGMGMDFLR 347 Query: 233 HTERTHVLLHIVSALEENVQAAYQCILDEL 262 H ER+ L+ +VS EN Q +++E+ Sbjct: 348 HIERSGGLVFVVSLESENPALDLQTLMNEI 377 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 2/94 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D + + +G+GG G +SF R+ G PDGG GG GG++++Q +N+++L + + Sbjct: 34 FVDLRLLRLHTGNGGNGCVSFLRDANRPIGPPDGGDGGDGGNIYVQVVNNVSSL--HKIK 91 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 + + A +G G G GED++L +PVGT + Sbjct: 92 RSYNAGNGRPGTSSQLDGKSGEDIILEIPVGTTM 125 >gi|296822528|ref|XP_002850300.1| GTP-binding protein 5 [Arthroderma otae CBS 113480] gi|238837854|gb|EEQ27516.1| GTP-binding protein 5 [Arthroderma otae CBS 113480] Length = 570 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 71/183 (38%), Positives = 109/183 (59%), Gaps = 16/183 (8%) Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 I+LA G GG GN HF S + P +A G G + L+LKL+AD+G++GLPNAGKST Sbjct: 264 IVLAAGAVGGLGNPHFVSKSVSRPMFATKGEQGMRLELELELKLLADVGLVGLPNAGKST 323 Query: 175 FLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKE---------------FILADIPGIIK 218 L S+T ++ ++ ++ FTTL PN+G +V + Y + F +ADIPG+I+ Sbjct: 324 LLRSITNSRTRVGNWAFTTLSPNIGTVVLDDYSQRKASLTTPGRPPRPRFTIADIPGLIE 383 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 NAHQ G+G FL+H ER +L +V + AA + + +EL AY S +++++ Sbjct: 384 NAHQDKGLGLGFLRHVERAGILAFVVDLSAGDAVAALKGLWNELGAYQSMRDRELDMDTQ 443 Query: 279 SQI 281 S++ Sbjct: 444 SRL 446 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 62/109 (56%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + +G GG+G ++F R K++E G +GG GG GG++ IQA +L + Sbjct: 83 FQDRCSLTVHTGSGGSGCVAFLRLKYLEHGPANGGDGGTGGNILIQAVEGQTSLHKLARR 142 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQE 111 KA G G +++ G +GEDV+L VPVGT V E + + + ++E Sbjct: 143 GVIKAGRGRNGRGKSQGGVRGEDVLLQVPVGTVVREVERFDPVAEKERE 191 >gi|325001939|ref|ZP_08123051.1| GTPase CgtA [Pseudonocardia sp. P1] Length = 357 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/179 (35%), Positives = 107/179 (59%), Gaps = 14/179 (7%) Query: 154 LKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADI 213 L+L+ +AD+G++G P+AGKS+ +AS++ A+PKIADYPFTTL P LG+V G + F +AD+ Sbjct: 12 LELRSLADVGLVGFPSAGKSSLVASLSAARPKIADYPFTTLVPQLGVVSAGDETFTVADV 71 Query: 214 PGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSEL 269 PG+I A G G+G FL+H ER VL+H+V E + + + + EL+ Y +L Sbjct: 72 PGLIPGAADGRGLGLEFLRHVERCSVLVHVVDCATFETERDPVSDIEALETELAHYADQL 131 Query: 270 ---------RKKIEIVGLSQIDTVD-SDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 ++ ++ L++ID D +D + + +L + G F S+ + G+ ++ Sbjct: 132 GTSALGERIDERPRLIALNKIDVPDAADLVDMVREDLTERFGWPVFAISTASRAGLREL 190 >gi|156061739|ref|XP_001596792.1| hypothetical protein SS1G_03015 [Sclerotinia sclerotiorum 1980] gi|154700416|gb|EDO00155.1| hypothetical protein SS1G_03015 [Sclerotinia sclerotiorum 1980 UF-70] Length = 469 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 81/235 (34%), Positives = 120/235 (51%), Gaps = 31/235 (13%) Query: 102 ISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIAD 161 ISL + E + ++LA G GG GN HF + P +A G G + L+LKL+AD Sbjct: 241 ISLDLSMPME-RPLLLAAGAVGGLGNPHFVTKQVPRPKFATKGEAGLRITLELELKLLAD 299 Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-----------------EG 204 +G++GLPNAGKST L +++ ++ ++ D+ FTTL PN+G V E Sbjct: 300 VGLVGLPNAGKSTLLRAMSNSRTRVGDWEFTTLEPNIGTVVIDDNKGRPLAQVNYENGEP 359 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 F +ADIPG++++AH G+G FL+H ER VL +V + N A + + EL+ Sbjct: 360 RTNFTIADIPGLVEDAHLDRGLGISFLRHVERARVLAFVVDLGKGNAVEALKGLWRELAE 419 Query: 265 YNSELRKKIE--------IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSIT 311 Y R KIE IV + +V+ D +A + + G FE S T Sbjct: 420 YE---RMKIEEEKEKANPIVEWTPFTSVE-DAVANRSETIVINTGPT-FEKSPRT 469 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/98 (41%), Positives = 61/98 (62%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+AK+ + +G GG G ISF REK+I G +GG GG GG+++IQA +L + Sbjct: 73 FADKAKIDVYAGAGGHGCISFLREKYIAAGPANGGDGGTGGNIYIQAVRGETSLHKLARR 132 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEED 100 ++ KA G+ G + + G +G D+++ VPVGT V E D Sbjct: 133 RNLKAGRGKNGQGKTKGGERGTDIIIEVPVGTIVRELD 170 >gi|18447544|gb|AAL68333.1| RE72863p [Drosophila melanogaster] Length = 222 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/197 (33%), Positives = 111/197 (56%), Gaps = 4/197 (2%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N F + +P + G G++ L+L+ +AD+G+IG PNAGKST L ++TRAKPK+ Sbjct: 14 NRFFTTDKETSPKVSEYGPRGEDLSYTLELRSMADVGLIGYPNAGKSTLLNALTRAKPKV 73 Query: 187 ADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS 245 A Y FTTL P+LG V+ + + + +AD+PG++ +AH+ G+G +FLKH ER +LL ++ Sbjct: 74 APYAFTTLRPHLGTVQYDDHVQLTIADLPGLVPDAHRNKGLGIQFLKHAERCTLLLFVLD 133 Query: 246 ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 A Y+ ++ EL + L + ++V +++D + EL + Sbjct: 134 ASAPEPWTHYEQLMHELRQFGGRLASRPQLVVANKLDVEEGQN---NFEELQRRLQNPVL 190 Query: 306 EFSSITGHGIPQILECL 322 S+ GH + Q+L + Sbjct: 191 GISAKMGHNLGQLLNSI 207 >gi|313229129|emb|CBY23714.1| unnamed protein product [Oikopleura dioica] Length = 337 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 81/269 (30%), Positives = 141/269 (52%), Gaps = 16/269 (5%) Query: 44 DVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGIS 103 ++W++A+ L++L + + AQ G+ G +R G G+DV + VPVG+ V G S Sbjct: 13 NIWLRASGKLSSLTHLK--DTYIAQDGKNGGTDHRYGRNGKDVEIEVPVGSLVKNSQG-S 69 Query: 104 LICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIG 163 ++ DL G ++ GG GG+GN F + N P A PG G+ ++L+ IAD G Sbjct: 70 VLIDLINSGDGFLIVSGGAGGYGNKEFANVDNPTPRTALPGEQGEIVNAEIELRSIADFG 129 Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI---LADIPGIIKNA 220 ++GLPNAGKS+ ++T +++D P TTL P+LG + Y++ + +AD+PGI + Sbjct: 130 LVGLPNAGKSSLTMTITNTDLEVSDIPGTTLIPHLGHIT--YRDKVSCSIADLPGIEPDQ 187 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + RFL+H R L++++ E++V + I L+ Y++ + ++ + Sbjct: 188 PRAP----RFLQHCARCVSLIYLIDGDDFHEQHVVEQFYIIRQHLADYDATINAEVRELE 243 Query: 278 LSQIDTVDS-DTLARKKNELATQCGQVPF 305 L++ D D +E + PF Sbjct: 244 LAKSKFYDRYDQDFETNDERYSSLADKPF 272 >gi|76156371|gb|AAX27584.2| SJCHGC03366 protein [Schistosoma japonicum] Length = 217 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 81/228 (35%), Positives = 123/228 (53%), Gaps = 38/228 (16%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQA--TSNLNTLIDFR 60 F+D+ ++++R+G G AG + + G GG GG V+++A T L L+ Sbjct: 5 FIDKLRIFVRAGSGAAGSPATK------------GHGGNGGSVFLEADETQTLQHLLKNN 52 Query: 61 YQQHFKAQHGEKGMKRN--RSGAKGEDVVLTVPVG-TQVFEEDGIS--------LICDLD 109 + FKA+HG + KR G G+D+ + VP G T +F G S +I +LD Sbjct: 53 PTKRFKAEHGVESSKRRGLVMGQDGKDLTIRVPAGVTVLFGGQGASSSDGSEQRIIGNLD 112 Query: 110 QEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPN 169 + GQ++++A GG GGF +Q Y PG Q I L LKL+AD +IG PN Sbjct: 113 KAGQKLLVAQGGMGGF---------HQNGYIGTPG---QAHSIILDLKLMADYSLIGFPN 160 Query: 170 AGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGI 216 AGKS+ L +++ A KIA YPFTT+ P + + Y++ +AD+PG+ Sbjct: 161 AGKSSLLKALSGAPVKIASYPFTTIKPQVAKCIYSDYRQISIADLPGL 208 >gi|154293788|ref|XP_001547339.1| hypothetical protein BC1G_14222 [Botryotinia fuckeliana B05.10] gi|150845195|gb|EDN20388.1| hypothetical protein BC1G_14222 [Botryotinia fuckeliana B05.10] Length = 550 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 79/242 (32%), Positives = 120/242 (49%), Gaps = 33/242 (13%) Query: 102 ISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIAD 161 ISL + E + ++LA G GG GN HF + P +A G G + L+LKL+AD Sbjct: 241 ISLDLSMPME-RPLLLAAGAVGGLGNPHFVTKQVPRPKFATKGDAGLRITLELELKLLAD 299 Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +G++GLPNAGKST L +++ ++ ++ D+ FTTL PN+G V E Sbjct: 300 VGLVGLPNAGKSTLLRAMSNSRTRVGDWEFTTLEPNIGTVIIDDNKGRPLAQSHYETGEP 359 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 F +ADIPG++++AH G+G FL+H ER VL +V N A + + EL+ Sbjct: 360 RTNFTIADIPGLVEDAHLDRGLGISFLRHVERARVLAFVVDLGRGNAVEALKGLWRELAE 419 Query: 265 YNSELRKKIE--------IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIP 316 Y R KIE +V + +V+ D +A + + G F + +P Sbjct: 420 YE---RMKIEEEKEKANPVVEWTPFTSVE-DAVANRSETIVVSSGPT---FENPLAPNLP 472 Query: 317 QI 318 I Sbjct: 473 SI 474 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/98 (41%), Positives = 61/98 (62%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+AK+ + +G GG G ISF REK+I G +GG GG GG+++IQA +L + Sbjct: 73 FADKAKIDVFAGAGGHGCISFLREKYIAAGPANGGDGGTGGNIYIQAVRGETSLHKLARR 132 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEED 100 ++ KA G+ G + + G +G D+++ VPVGT V E D Sbjct: 133 RNLKAGRGKNGQGKTKGGERGTDIIIEVPVGTIVRELD 170 >gi|154288984|ref|XP_001545192.1| hypothetical protein BC1G_16293 [Botryotinia fuckeliana B05.10] gi|150851867|gb|EDN27059.1| hypothetical protein BC1G_16293 [Botryotinia fuckeliana B05.10] Length = 456 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 103/190 (54%), Gaps = 21/190 (11%) Query: 102 ISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIAD 161 ISL + E + ++LA G GG GN HF + P +A G G + L+LKL+AD Sbjct: 241 ISLDLSMPME-RPLLLAAGAVGGLGNPHFVTKQVPRPNFATKGDAGLRITLELELKLLAD 299 Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +G++GLPNAGKST L +++ ++ ++ D+ FTTL PN+G V E Sbjct: 300 VGLVGLPNAGKSTLLRAMSNSRTRVGDWEFTTLEPNIGTVIIDDNKGRPLAQSHYETGEP 359 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 F +ADIPG++++AH G+G FL+H ER VL +V N A + + EL+ Sbjct: 360 RTNFTIADIPGLVEDAHLDRGLGISFLRHVERARVLAFVVDLGRGNAVEALKGLWRELAE 419 Query: 265 YNSELRKKIE 274 Y R KIE Sbjct: 420 YE---RMKIE 426 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/98 (41%), Positives = 61/98 (62%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+AK+ + +G GG G ISF REK+I G +GG GG GG+++IQA +L + Sbjct: 73 FADKAKIDVFAGAGGHGCISFLREKYIAAGPANGGDGGTGGNIYIQAVRGETSLHKLARR 132 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEED 100 ++ KA G+ G + + G +G D+++ VPVGT V E D Sbjct: 133 RNLKAGRGKNGQGKTKGGERGTDIIIEVPVGTIVRELD 170 >gi|145351868|ref|XP_001420283.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580517|gb|ABO98576.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 305 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 89/255 (34%), Positives = 130/255 (50%), Gaps = 12/255 (4%) Query: 81 AKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYY 140 ++G D VP+GT V E ++ DL ++GQ +LA GG GG GN + Sbjct: 56 SRGADARARVPLGTIVRGE--WLVVADLTRDGQTCVLARGGKGGKGNKRM--PVGREAGT 111 Query: 141 ANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI 200 PG G+E L+LK +AD+G++GLPNAGKST L +++ A P++ Y FTT+ P LG Sbjct: 112 REPGAPGEEGKFVLELKTVADVGLVGLPNAGKSTLLRALSNATPRVGSYAFTTMQPQLGA 171 Query: 201 VKEGYKEFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQA--AYQ 256 V E I LADIPG+IK AH+ G+G FL+H ER L ++V + V+ A Sbjct: 172 VSATDGETITLADIPGLIKGAHENKGLGHNFLRHVERCEALAYVVDLSSGDGVKPWDALD 231 Query: 257 CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGI 315 + EL Y L K+ + ++ D + AR L + P F S+ G Sbjct: 232 ILKRELEEYLPGLSKRPGFIVATKTDLPHT---ARTLKALRARTAPTPVFAVSAANREGT 288 Query: 316 PQILECLHDKIFSIR 330 ++L ++I R Sbjct: 289 DEVLRVFENEIIGNR 303 >gi|119494807|ref|XP_001264208.1| GTP-binding protein Obg [Neosartorya fischeri NRRL 181] gi|119412370|gb|EAW22311.1| GTP-binding protein Obg [Neosartorya fischeri NRRL 181] Length = 558 Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 108/345 (31%), Positives = 158/345 (45%), Gaps = 82/345 (23%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+ + I +G GG G +SF REK+IE G P+GG GG GG ++IQA + +L + Sbjct: 79 FQDKCRSTIYAGSGGNGCVSFLREKYIEEGPPNGGDGGSGGSIYIQAVEGITSLHKLARR 138 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICD--------------L 108 KA G+ G +++ G +GEDV+L VPVGT V E D + + L Sbjct: 139 GVIKAGRGKNGQGKSKGGRRGEDVLLQVPVGTVVREVDRYDPVAEELKRRKAPAVDVDEL 198 Query: 109 DQEG------QRIILAPGGNGG-------------------------------------- 124 D+ G R +L PG N Sbjct: 199 DEIGLPSVRHDRWVLYPGSNPSDFLTTVFPRNPPRRQNIAAMEPKAPIYLDLSKPMDKPI 258 Query: 125 ---------FGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTF 175 GN H+ S + P +A+ G G + +LKL+AD+G++G PNAGKST Sbjct: 259 LLAAGGIGGLGNPHWVSRSITRPKFASRGEGGMRLELEFELKLLADVGLVGKPNAGKSTL 318 Query: 176 LASVTRAKPKIADYPFTTLYPNLGIV---------------KEGYKEFILADIPGIIKNA 220 L S+T ++ ++ ++ FTTL P++G V K F +ADIPG+I+ A Sbjct: 319 LRSLTNSRTRVGNWEFTTLSPSIGTVVIDDHKGRPLVEAKGKAIRTNFTIADIPGLIEGA 378 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 H G+G FL+H ER +L +V + + Q + ELS Y Sbjct: 379 HLDRGLGLGFLRHIERAGILAFVVDLSAGDPVQSLQNLWHELSEY 423 >gi|312211553|emb|CBX91638.1| similar to GTP-binding protein Obg [Leptosphaeria maculans] Length = 556 Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 104/358 (29%), Positives = 163/358 (45%), Gaps = 90/358 (25%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D V + +G GG G +SF REK+IE G +GG GG GG+V+IQA +L + Sbjct: 75 FADRCIVTVEAGGGGHGCVSFLREKYIEEGPANGGDGGSGGNVYIQAVRGETSLHKLARR 134 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE---EDGISLI-----------CDL 108 + KA G+ G + + G +G D+++TVPVGT V E D IS++ + Sbjct: 135 RLIKAGRGKNGQGKVKGGERGSDILITVPVGTVVREIQRHDPISIMEEEHWKMESYEGEA 194 Query: 109 DQEGQ--------RIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKL---- 156 D+ G+ R ++ PG N K P ++ L + IWL L Sbjct: 195 DESGEDKGSYRKDRWLVYPGTVPAELN-RMKFPKLPPPRRSHLAALEPDSPIWLDLDKHM 253 Query: 157 ---------------------------------------------KLIADIGIIGLPNAG 171 K++AD+G++GLPNAG Sbjct: 254 ETPMLIAAGAMGGLGNPHFMTPFNNRPKMATRGDEGLKISLQLELKILADLGLVGLPNAG 313 Query: 172 KSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYK----------------EFILADIP 214 KST L +++ ++ ++ ++ FTTL PN+G +V + +K F +AD+P Sbjct: 314 KSTLLRALSNSRARVGNWAFTTLQPNVGTVVLDNHKGRPLVTSRNKHGELRDNFTVADVP 373 Query: 215 GIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G+I++AH G+G FL+H ER VL ++ + A + + E+S Y + LR K Sbjct: 374 GLIEDAHLDKGLGLGFLRHIERAAVLAFVIDLNAGDAVDALKLLWREVSEYET-LRGK 430 >gi|324518264|gb|ADY47053.1| GTP-binding protein 10 [Ascaris suum] Length = 391 Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 96/313 (30%), Positives = 147/313 (46%), Gaps = 59/313 (18%) Query: 1 MKFLDEAKVY--IRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLID 58 M +DE ++ IR+G+GG G + F G GG GG+V++ NL D Sbjct: 24 MSIIDEDRIRLSIRAGNGGLGILRF------------NGLGGDGGNVYMIGQPNL----D 67 Query: 59 FRYQQH-------FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQE 111 FR + +A G+K + +GED +L VPVG + + + LI + Sbjct: 68 FREMRKRLAGSRKIRAGDGQKALHTKLVAERGEDAILHVPVGVEAVDAETNVLIARCTRP 127 Query: 112 GQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAG 171 R ++A GG GG + ++ G G+ ++ LKL +IG++G PNAG Sbjct: 128 FHRYLVARGGLGGCRDNQYQ------------GRRGERCVVDFHLKLRPNIGLVGFPNAG 175 Query: 172 KSTFLASVTRAKP-KIADYPFTTLYPNLGIVK--------EGYKEFILA--DIPGIIKNA 220 KST + ++ K KIA YPFTT P L V+ EG EF L+ D+PGII+ A Sbjct: 176 KSTIMKALIPKKTIKIASYPFTTRKPQLCYVRDFDGVTNVEGDDEFTLSIVDLPGIIEGA 235 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILD-------ELSAYNSEL 269 G G FLKH + + VLL +V L + ++ L+ EL Y+ L Sbjct: 236 SLNRGRGISFLKHLQYSDVLLMVVDVTGFKLSVSPSEPFRSALETVALLNIELERYDPHL 295 Query: 270 RKKIEIVGLSQID 282 +K ++ +++ D Sbjct: 296 VRKPTVLAINKTD 308 >gi|71020559|ref|XP_760510.1| hypothetical protein UM04363.1 [Ustilago maydis 521] gi|46100405|gb|EAK85638.1| hypothetical protein UM04363.1 [Ustilago maydis 521] Length = 905 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 107/201 (53%), Gaps = 39/201 (19%) Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 I+LA GG GG GN F SS N++P +A G G+ + L+LK +DIG++GLPNAGKST Sbjct: 703 ILLASGGRGGLGNPTFLSSANRSPKFATRGEWGESLEVMLELKRPSDIGLVGLPNAGKST 762 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVK----------------EGY------------- 205 L +++ +K ++ + FTTL PNLG+V+ EGY Sbjct: 763 ILRAISASKAQVGHWRFTTLSPNLGVVRLGSDGNVIGVDDSEVQEGYGDDRAIYSKCAST 822 Query: 206 --------KEF--ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY 255 +EF +L+DIPG+I A G+G FL+H ER +L +++ E Sbjct: 823 GEACVDAEEEFRLVLSDIPGLIDGAADNRGLGHTFLRHIERCSLLAYVLDLTEPEPWRDL 882 Query: 256 QCILDELSAYNSELRKKIEIV 276 + + +EL++Y ++L K ++ Sbjct: 883 KVLHNELASYRNDLPTKARLL 903 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 2/94 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ + + +G GG G +SF REKF++FG P GG+GG GG ++I+A TL R Sbjct: 404 FVDQLYLRLTAGKGGDGCVSFHREKFVQFGPPSGGNGGSGGSIYIRAVDGPTTLA--RIS 461 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 + F+ G G G K ED + VPVGT V Sbjct: 462 RRFRGADGPHGQGSFLHGKKMEDKFIEVPVGTVV 495 >gi|281210707|gb|EFA84873.1| GTP1/OBG family protein [Polysphondylium pallidum PN500] Length = 566 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/175 (39%), Positives = 104/175 (59%), Gaps = 21/175 (12%) Query: 102 ISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIAD 161 + ++ D+++ GQ ++L GG GG GN +F + +N++P YA G G++K + +LK+IAD Sbjct: 268 VQVLADMNEPGQELVLLQGGKGGKGNFNFATGSNRSPNYAQSGTPGEQKYLEFELKIIAD 327 Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG---------------------I 200 IG++G PNAGKST L+ V+ A PKI +YPFTTL P +G + Sbjct: 328 IGLVGYPNAGKSTLLSRVSNAIPKIRNYPFTTLRPYVGVVDLNTEAEHKPVKLSKRPRKV 387 Query: 201 VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY 255 V++ LAD+PGI++ AH G+G FL+H ERT VL ++ E V A + Sbjct: 388 VEDHLNTTTLADLPGILEGAHLNIGLGLDFLRHIERTKVLCFVIDMSNEGVPAIW 442 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/98 (40%), Positives = 63/98 (64%), Gaps = 2/98 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+D+ ++ ++GDGG+G + F R K+I G PDGG+GG G V ++A N N L Sbjct: 96 MSFVDKLRIKAKAGDGGSGSVHFFRAKYIPEGPPDGGNGGDGASVIVRANMNDNNLSHL- 154 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 +++ ++GEKG ++G KGED++L+VP GT + E Sbjct: 155 -SRNYVGENGEKGKGGKKTGKKGEDIILSVPPGTIIKE 191 >gi|225077097|ref|ZP_03720296.1| hypothetical protein NEIFLAOT_02150 [Neisseria flavescens NRL30031/H210] gi|224951654|gb|EEG32863.1| hypothetical protein NEIFLAOT_02150 [Neisseria flavescens NRL30031/H210] Length = 218 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/126 (46%), Positives = 89/126 (70%), Gaps = 5/126 (3%) Query: 167 LPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAG 225 +PNAGKST + +V+ A+PKIA+YPFTTL+PNLG+V+ + F++ADIPG+I+ A +GAG Sbjct: 1 MPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAG 60 Query: 226 IGDRFLKHTERTHVLLHIV--SALEENVQAAYQ--CILDELSAYNSELRKKIEIVGLSQI 281 +G RFLKH RT +LLH+V + +E A + I++EL Y+ EL K + L+++ Sbjct: 61 LGHRFLKHLSRTGLLLHVVDLAPFDETANPAEEALAIINELRKYDEELYGKPRWLVLNKL 120 Query: 282 DTVDSD 287 D +D + Sbjct: 121 DMLDEE 126 >gi|237830965|ref|XP_002364780.1| GTP-binding protein, putative [Toxoplasma gondii ME49] gi|211962444|gb|EEA97639.1| GTP-binding protein, putative [Toxoplasma gondii ME49] gi|221507661|gb|EEE33265.1| conserved hypothetical protein [Toxoplasma gondii VEG] Length = 733 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 51/110 (46%), Positives = 80/110 (72%), Gaps = 1/110 (0%) Query: 138 PYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN 197 P+ A+ G G+EK+I ++LK IAD+G++G PNAGKS+ LA+++R P++A +PFTT PN Sbjct: 208 PHRADCGEEGEEKVIEVELKSIADVGLVGFPNAGKSSILAALSRCAPRVASFPFTTTGPN 267 Query: 198 LGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 +G V E +AD+PG+++NAH G+G FL+H ERT +L++++ A Sbjct: 268 VGSVSFENGDTLSVADLPGLVQNAHLNEGMGHAFLRHCERTSLLVYVLDA 317 >gi|159131671|gb|EDP56784.1| GTP-binding protein Obg [Aspergillus fumigatus A1163] Length = 558 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 109/345 (31%), Positives = 161/345 (46%), Gaps = 82/345 (23%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+ + I +G GG G +SF REK+IE G P+GG GG GG ++IQA + +L + Sbjct: 79 FQDKCRSTIYAGSGGNGCVSFLREKYIEEGPPNGGDGGSGGSIYIQAVEGITSLHKLARR 138 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICD--------------L 108 KA G+ G +++ G +GEDV+L VPVGT V E D + + L Sbjct: 139 GVIKAGRGKNGQGKSKGGRRGEDVLLQVPVGTVVREVDRYDPVAEELKRRKTPAADVDEL 198 Query: 109 DQEG------QRIILAPGGNGG-------------------------------------- 124 D+ G R +L PG N Sbjct: 199 DEIGLPSVRHDRWVLYPGSNPSDFLTTVFPKKPPRRQNIAAMEPKAPIYLDLSKPMDKPI 258 Query: 125 ---------FGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTF 175 GNAH+ S + P +A+ G G + +LKL+AD+G++G PNAGKST Sbjct: 259 LLAAGGVGGLGNAHWVSRSITRPKFASRGEGGMRLELEFELKLLADVGLVGKPNAGKSTL 318 Query: 176 LASVTRAKPKIADYPFTTLYPNLG-IVKEGYK--------------EFILADIPGIIKNA 220 L S+T ++ ++ ++ FTTL P++G ++ + YK F +ADIPG+I+ A Sbjct: 319 LRSLTNSRTRVGNWAFTTLSPSIGTVIIDDYKGRPLVEAKGKAMRTNFTIADIPGLIEGA 378 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 H G+G FL+H ER +L +V + Q + ELS Y Sbjct: 379 HLDRGLGLGFLRHIERAGILAFVVDLSAGDPVQGLQNLWHELSEY 423 >gi|70996324|ref|XP_752917.1| GTP-binding protein Obg [Aspergillus fumigatus Af293] gi|66850552|gb|EAL90879.1| GTP-binding protein Obg [Aspergillus fumigatus Af293] Length = 558 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 109/345 (31%), Positives = 161/345 (46%), Gaps = 82/345 (23%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+ + I +G GG G +SF REK+IE G P+GG GG GG ++IQA + +L + Sbjct: 79 FQDKCRSTIYAGSGGNGCVSFLREKYIEEGPPNGGDGGSGGSIYIQAVEGITSLHKLARR 138 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICD--------------L 108 KA G+ G +++ G +GEDV+L VPVGT V E D + + L Sbjct: 139 GVIKAGRGKNGQGKSKGGRRGEDVLLQVPVGTVVREVDRYDPVAEELKRRKTPAADVDEL 198 Query: 109 DQEG------QRIILAPGGNGG-------------------------------------- 124 D+ G R +L PG N Sbjct: 199 DEIGLPSVRHDRWVLYPGSNPSDFLTTVFPKNPPRRQNIAAMEPKAPIYLDLSKPMDKPI 258 Query: 125 ---------FGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTF 175 GNAH+ S + P +A+ G G + +LKL+AD+G++G PNAGKST Sbjct: 259 LLAAGGVGGLGNAHWVSRSITRPKFASRGEGGMRLELEFELKLLADVGLVGKPNAGKSTL 318 Query: 176 LASVTRAKPKIADYPFTTLYPNLG-IVKEGYK--------------EFILADIPGIIKNA 220 L S+T ++ ++ ++ FTTL P++G ++ + YK F +ADIPG+I+ A Sbjct: 319 LRSLTNSRTRVGNWAFTTLSPSIGTVIIDDYKGRPLVEAKGKAMRTNFTIADIPGLIEGA 378 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 H G+G FL+H ER +L +V + Q + ELS Y Sbjct: 379 HLDRGLGLGFLRHIERAGILAFVVDLSAGDPVQGLQNLWHELSEY 423 >gi|6456500|gb|AAF09165.1|U31922_1 GTP-binding protein homolog [Streptococcus pyogenes] Length = 145 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 62/131 (47%), Positives = 91/131 (69%), Gaps = 1/131 (0%) Query: 104 LICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIG 163 +I DL + GQ +++A GG GG GN F + N AP A G G+E+ + L+LK++AD+G Sbjct: 13 VITDLVEHGQEVVIAKGGRGGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVG 72 Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQ 222 ++G P+ GKST L+ V+ AKPKI Y FTT+ PNLG+V+ + F +AD+PG+I+ A Q Sbjct: 73 LVGFPSVGKSTLLSVVSSAKPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQ 132 Query: 223 GAGIGDRFLKH 233 G G+G +FL+H Sbjct: 133 GVGLGTQFLRH 143 >gi|255719256|ref|XP_002555908.1| KLTH0H00660p [Lachancea thermotolerans] gi|238941874|emb|CAR30046.1| KLTH0H00660p [Lachancea thermotolerans] Length = 536 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 79/218 (36%), Positives = 121/218 (55%), Gaps = 5/218 (2%) Query: 64 HFKAQHGEKGMKRNRSGAKGEDV-VLTVPVGTQVFEEDGISLI-CDLDQEGQR-IILAPG 120 HFK + E +++N E V + + + + D L+ DLD+ R I L G Sbjct: 261 HFKGKDEEYHLEKNWFKQLKEKVSIYDLELASSELSADKFPLLGIDLDKPSDRPICLVKG 320 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG GN HF ++ + P ++ G G E+ +LK +ADIG++GLPNAGKST L ++ Sbjct: 321 GKGGLGNMHFLTNLIRNPRFSKMGRSGLEQFFMFELKSLADIGLVGLPNAGKSTILNKIS 380 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 +A+PKI + FTT +P++G G + F +ADIPGIIK+A + G+G FL+H +R+ Sbjct: 381 KARPKIGHWEFTTTHPSIGTFNVGAEGFGFTVADIPGIIKDASKDKGMGLEFLRHIQRSK 440 Query: 239 VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +VS E+ A Q ++ EL RK + +V Sbjct: 441 GWTIVVSLEREDPLADLQLLISELGGMEEVARKNVLVV 478 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 2/95 (2%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 KF+D + RSG GG G +SF R+ G PDGG GG GG V++QA LN+L + Sbjct: 105 KFVDVRILKCRSGQGGDGAVSFFRDAGRAIGPPDGGDGGDGGSVFVQAIEGLNSLA--KL 162 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 + + A+ G G + GA+G+DV+++VPVGT V Sbjct: 163 KTSYIAEDGANGAAKQLDGARGKDVLISVPVGTVV 197 >gi|315056211|ref|XP_003177480.1| GTP-binding protein 5 [Arthroderma gypseum CBS 118893] gi|311339326|gb|EFQ98528.1| GTP-binding protein 5 [Arthroderma gypseum CBS 118893] Length = 574 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 71/183 (38%), Positives = 107/183 (58%), Gaps = 16/183 (8%) Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 I+LA G GG GN HF S + P +A G G + L+LKL+AD+G++GLPNAGKST Sbjct: 267 IVLAAGAVGGLGNPHFVSKSIGRPMFATKGEQGMRLELELELKLLADVGLVGLPNAGKST 326 Query: 175 FLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKE---------------FILADIPGIIK 218 L S+T ++ +I ++ FTTL PN+G +V + Y + F +ADIPG+I+ Sbjct: 327 LLRSITNSRTRIGNWAFTTLSPNIGTVVLDDYSQRKARLATPGRAPRPRFTIADIPGLIE 386 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 NAH G+G FL+H ER +L +V + AA + + +EL AY S +++ + Sbjct: 387 NAHLDRGLGLGFLRHVERAGILAFVVDLSAGDAVAALKGLWNELGAYQSMRDRELSLDTQ 446 Query: 279 SQI 281 S++ Sbjct: 447 SRL 449 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 63/109 (57%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + +G GG+G ++F R K++E G +GG GG GG++ IQA +L + Sbjct: 86 FQDRCSLTVHTGSGGSGCVAFLRLKYLEHGPANGGDGGTGGNILIQAVEGQTSLHKLARR 145 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQE 111 KA G+ G +++ G +GEDV+L VPVGT V E + + + ++E Sbjct: 146 GVIKAGRGKNGRGKSQGGVRGEDVLLQVPVGTVVREVERHDPVAEKERE 194 >gi|254580329|ref|XP_002496150.1| ZYRO0C11638p [Zygosaccharomyces rouxii] gi|238939041|emb|CAR27217.1| ZYRO0C11638p [Zygosaccharomyces rouxii] Length = 535 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 60/138 (43%), Positives = 86/138 (62%), Gaps = 2/138 (1%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF ++ + P +A G G E + +LK IAD+G++GLPNAGKST L ++ AKPKI Sbjct: 327 NMHFLTNMIRNPRFAKAGRSGLECLFLFELKSIADLGLVGLPNAGKSTILNKISNAKPKI 386 Query: 187 ADYPFTTLYPNLGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + FTTL P++G + G + F +ADIPGII+NA Q G+G FL+H ER+ + ++ Sbjct: 387 GHWEFTTLNPSIGTISPGIDKPSFTVADIPGIIENAAQDKGMGLEFLRHIERSKGWVFVI 446 Query: 245 SALEENVQAAYQCILDEL 262 S EN + +L EL Sbjct: 447 SIANENPLEDFHILLQEL 464 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 40/94 (42%), Positives = 58/94 (61%), Gaps = 2/94 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V RSGDGG G +SF R+ G P+GG GG GG V+++A++ +N+L R Sbjct: 105 FVDIRIVKCRSGDGGDGIVSFFRDANRSVGPPNGGDGGDGGSVYVRASTGINSLAKLRTT 164 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 + A +G G GA+G+D+++TVPVGT V Sbjct: 165 --YIADNGSNGAADQLDGARGKDILITVPVGTVV 196 >gi|300120363|emb|CBK19917.2| unnamed protein product [Blastocystis hominis] Length = 373 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 95/315 (30%), Positives = 145/315 (46%), Gaps = 80/315 (25%) Query: 45 VWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGT---QVFEEDG 101 V+I+ SN++ L + +KA+ G+ G + G G D+ + VPVGT ++FE + Sbjct: 14 VYIRVNSNMDALT--LPKSVYKAEDGQNGKGKCMHGRGGNDMFIDVPVGTLVYKIFENEN 71 Query: 102 IS------------------------------------------------LICDLD--QE 111 S L+ D ++ Sbjct: 72 FSGNSLQENEARASFEEQMIQHMGSRFLQVRESEKAQSSQSNENSEMIKELLFDTSFAED 131 Query: 112 GQRIILAPGGNGGFGN-----------AHFKSSTN----QAPYYA-----NPGILGQEKI 151 Q +A GG GG GN H+ S QA YY N G G+E Sbjct: 132 KQLFCVARGGKGGEGNHEWYEKMKRSHLHYWGSNRDRRLQATYYKHDENHNAGEPGEEIS 191 Query: 152 IWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI-L 210 + L+ + +A++G+IG PNAGKST ++ +T+ PKIA YPFTTL P +G ++ I + Sbjct: 192 LLLQTQKLAEVGLIGYPNAGKSTLISKLTKTAPKIAAYPFTTLRPLVGYIQYSDSSMISV 251 Query: 211 ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNS 267 ADIPGII AH G+G FL+H +RT VL +++ + ++V Y+ I EL Y+ Sbjct: 252 ADIPGIISGAHNNRGLGFSFLRHIQRTKVLTYVID-VSDSVHLPNQVYREIQKELLHYDE 310 Query: 268 ELRKKIEIVGLSQID 282 L +K I+ ++ID Sbjct: 311 SLLRKPTIIVANKID 325 >gi|331006569|ref|ZP_08329860.1| GTP-binding protein Obg [gamma proteobacterium IMCC1989] gi|330419619|gb|EGG93994.1| GTP-binding protein Obg [gamma proteobacterium IMCC1989] Length = 244 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 61/141 (43%), Positives = 91/141 (64%), Gaps = 11/141 (7%) Query: 167 LPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAG 225 +PNAGKSTF+ +V+ AKPK+ADYPFTTL PNLG+VK E ++ F++ADIPG+I A GAG Sbjct: 1 MPNAGKSTFIRAVSSAKPKVADYPFTTLVPNLGVVKVEEHRSFVVADIPGLIAGASDGAG 60 Query: 226 IGDRFLKHTERTHVLLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 +G RFLKH R VLLH+V E + + I++E+ ++ +L + + L+++D Sbjct: 61 LGIRFLKHLTRCRVLLHLVDMAPFDESSPLENAKSIINEIERFSDKLAGRERWLLLNKVD 120 Query: 283 TVDSDTLARKKNELATQCGQV 303 + D E+ +C +V Sbjct: 121 LLPGD-------EVEARCKEV 134 >gi|317026542|ref|XP_001389783.2| GTP-binding protein Obg [Aspergillus niger CBS 513.88] Length = 557 Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 104/346 (30%), Positives = 154/346 (44%), Gaps = 83/346 (23%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+ + I +G GG G +SF REK++E G P+GG GG GG ++IQA + +L + Sbjct: 80 FQDKCRSTIYAGAGGHGCVSFLREKYVEEGPPNGGDGGSGGSIYIQAVEGMTSLHKLARR 139 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICD----LDQEG------ 112 KA G+ G +++ G +G DV+L VP+GT V E D + + QEG Sbjct: 140 GIIKAGRGKNGQGKSKGGKRGNDVLLQVPIGTVVREVDRYDPVTEEIVRRKQEGAEERDE 199 Query: 113 -----------QRIILAPGGNGG------------------------------------- 124 R +L PG N Sbjct: 200 IDELGLPSIRHDRWVLYPGANPSDYLTTVFPKNPPRRQHIAALEPKAPIYLDLSQHMDKP 259 Query: 125 ----------FGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 GN HF + P +A+ G G + +LKL+AD+G++G PNAGKST Sbjct: 260 ILLAAGGVGGLGNPHFVTRNMNRPTFASRGEGGMRLELEFELKLLADVGLVGKPNAGKST 319 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIV---------------KEGYKEFILADIPGIIKN 219 L S+T ++ ++ ++ FTTL PN+G V K F +ADIPG+I++ Sbjct: 320 LLRSLTNSRTRVGNWEFTTLSPNIGTVVIDNHKGRPLVESKGKARRTNFTIADIPGLIED 379 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 AH G+G FL+H ER +L +V + + + EL Y Sbjct: 380 AHLDKGLGLGFLRHIERAGILAFVVDLSAGDPVQGLKNLWHELGEY 425 >gi|302895419|ref|XP_003046590.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256727517|gb|EEU40877.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 574 Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 30/220 (13%) Query: 84 EDVVLTVPVGTQVFEEDGISLICDLDQEGQR-IILAPGGNGGFGNAHFKSSTNQAPYYAN 142 + V +P +++++ + DL + + I+LA GG GG GN HF S + P +A Sbjct: 238 QTVFPRLPKRHRLYKQPPPKIHLDLSRPTPKPILLATGGIGGLGNPHFTSRAHPRPMFAT 297 Query: 143 PGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV- 201 G + L+LKL+AD+G++GLPNAGKST L ++T ++ ++ ++ FTTL PN+G V Sbjct: 298 KGEDAISMKVELELKLLADVGLVGLPNAGKSTLLRAITNSRTRVGNWAFTTLQPNIGTVV 357 Query: 202 ---------------------------KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 E F +ADIPG+I+ AH G+G FL+H Sbjct: 358 LDKYSGRPTIKSYRRYPAQMGLPEEIETEPRTRFTIADIPGLIEGAHLDRGLGIAFLRHV 417 Query: 235 ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 ER VL ++ N A + E+ Y +++R + E Sbjct: 418 ERAGVLAFVIDLAAGNAVKALDALWREVGLY-AQMRDEEE 456 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+A++ + +G GG G ISF RE ++ G P+GG GG GG+V+IQA +L + Sbjct: 61 FSDKAQLSLYAGRGGNGCISFLREAYLAEGPPNGGDGGHGGNVYIQAAHGETSLHKLARK 120 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE---EDGIS 103 + +A G+ G +SG +G+DV++TVPVGT V E ED ++ Sbjct: 121 RFIRAGRGKHGQGSAKSGTRGDDVIITVPVGTVVRELEREDPVA 164 >gi|46136459|ref|XP_389921.1| hypothetical protein FG09745.1 [Gibberella zeae PH-1] Length = 567 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 110/218 (50%), Gaps = 30/218 (13%) Query: 86 VVLTVPVGTQVFEEDGISLICDLDQEGQR-IILAPGGNGGFGNAHFKSSTNQAPYYANPG 144 V +P T++ ++ ++ DL + I+LA GG GG GN HF S + P +A G Sbjct: 239 VFPKLPKRTRLLKQPPPTIRLDLSRPTPTPILLATGGIGGLGNPHFTSRAHPRPMFATKG 298 Query: 145 ILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV--- 201 I L+LKL+AD+G++GLPNAGKST L ++T ++ ++ ++ FTTL PN+G V Sbjct: 299 DDAVTMKIELELKLLADVGLVGLPNAGKSTLLRAITNSRTRVGNWAFTTLQPNIGTVVLD 358 Query: 202 -------------------------KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTER 236 E F +ADIPG+I+ AH G+G FL+H ER Sbjct: 359 KYSGRPTIKSYRRYPAQLGLPEEVETEPRTRFTIADIPGLIEGAHLDRGLGIAFLRHVER 418 Query: 237 THVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 VL ++ + A + E+ Y +++R + E Sbjct: 419 AGVLAFVIDLSAGDAVKALDSLWREVGLY-AQMRDEEE 455 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 62/105 (59%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+A + + +G GG G ISF RE ++ G P+GG GG GG+V+IQA +L + Sbjct: 59 FSDKAFLTLYAGRGGNGCISFLREAYLAEGPPNGGDGGHGGNVYIQAAHGETSLHKLSRK 118 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICD 107 + +A G+ G + G +G+D+++TVPVGT V E + + D Sbjct: 119 RFVRAGRGKHGQGSAKGGTRGDDIIITVPVGTVVRELEREDPVAD 163 >gi|302503284|ref|XP_003013602.1| hypothetical protein ARB_00049 [Arthroderma benhamiae CBS 112371] gi|291177167|gb|EFE32962.1| hypothetical protein ARB_00049 [Arthroderma benhamiae CBS 112371] Length = 569 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/183 (38%), Positives = 106/183 (57%), Gaps = 16/183 (8%) Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 IILA G GG GN HF S + P +A G G + L+LKL+AD+G++GLPNAGKST Sbjct: 262 IILAAGAVGGLGNPHFVSKSIGRPMFATKGEQGMRLELELELKLLADVGLVGLPNAGKST 321 Query: 175 FLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKE---------------FILADIPGIIK 218 L S+T ++ ++ ++ FTTL PN+G +V + Y + F +ADIPG+I+ Sbjct: 322 LLRSITNSRTRVGNWAFTTLSPNIGTVVLDDYSQRKARLATPGRAPRPRFTIADIPGLIE 381 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 NAH G+G FL+H ER +L +V + A + + +EL AY S +++ + Sbjct: 382 NAHLDKGLGLGFLRHVERAGILAFVVDLSAGDAVTALKGLWNELGAYQSMRDRELSLDTQ 441 Query: 279 SQI 281 S++ Sbjct: 442 SRL 444 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 63/109 (57%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + +G GG+G ++F R K++E G +GG GG GG++ IQA +L + Sbjct: 81 FQDRCSLTVHTGSGGSGCVAFLRLKYLEHGPANGGDGGTGGNILIQAVEGQTSLHKLARR 140 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQE 111 KA G+ G +++ G +GEDV+L VPVGT V E + + + ++E Sbjct: 141 GVIKAGRGKNGRGKSQGGVRGEDVLLQVPVGTVVREIERFDPVAEKERE 189 >gi|255086521|ref|XP_002509227.1| predicted protein [Micromonas sp. RCC299] gi|226524505|gb|ACO70485.1| predicted protein [Micromonas sp. RCC299] Length = 207 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/168 (38%), Positives = 99/168 (58%), Gaps = 12/168 (7%) Query: 141 ANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI 200 + PG G++ I L+LK +ADIG++G PNAGKST L +++ A+PK+A+Y FTT+ P LG Sbjct: 22 SEPGGKGEDATIVLELKSVADIGLVGFPNAGKSTLLRAISSAQPKVAEYAFTTISPQLGA 81 Query: 201 VKE--GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV-----SALEENVQA 253 V G F++ADIPG+I+ AH+ G+G FL+H ER +++V + V+ Sbjct: 82 VSTDGGISSFVVADIPGLIEGAHENRGLGHNFLRHVERCAAFVYVVDLGAGAGGRPGVRP 141 Query: 254 --AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLA---RKKNEL 296 A Q ++ EL AY L + IV ++ D +S A R++ L Sbjct: 142 WNALQTLMAELEAYLPGLSARPAIVVGTKADLPNSSRAAETLRRRTTL 189 >gi|310792264|gb|EFQ27791.1| obg family GTPase CgtA [Glomerella graminicola M1.001] Length = 593 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 105/206 (50%), Gaps = 31/206 (15%) Query: 91 PVGTQVFEEDGISLICDLDQEG-QRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQE 149 P T+++ + + DL + Q I+LA GG GG GN HF S P +A G Sbjct: 260 PTRTRLYHQPPGPIQLDLSRPSPQPILLAVGGIGGLGNPHFVSREYPRPIFATKGERAVT 319 Query: 150 KIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYK-- 206 I L+LKL+AD+G++GLPNAGKST L ++T ++ ++ ++ FTTL PN+G +V + YK Sbjct: 320 MEIELELKLLADVGLVGLPNAGKSTLLRALTNSRTRVGNWAFTTLQPNIGTVVLDSYKGR 379 Query: 207 ---------------------------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 F +ADIPG+I+ AH G+G FL+H ER V Sbjct: 380 PVIKSYKRYPATNGGSGQEEVLVEQRTRFTVADIPGLIEGAHLDRGLGIAFLRHVERAGV 439 Query: 240 LLHIVSALEENVQAAYQCILDELSAY 265 L +V A + + +E+ Y Sbjct: 440 LAFVVDLSAGPAVKALKALWNEVGLY 465 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 60/96 (62%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+A V + +G GG G ISF R+ ++ G P+GG GG GG+++IQA +L + Sbjct: 67 FADKASVTLYAGPGGHGCISFFRDAYLPDGPPNGGDGGHGGNIYIQAVHGETSLHKLARR 126 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 + +A G+ G ++ G +G+DV++TVPVGT V E Sbjct: 127 RFIRAGKGKSGQGSSKGGQRGDDVIITVPVGTVVRE 162 >gi|302781054|ref|XP_002972301.1| hypothetical protein SELMODRAFT_412920 [Selaginella moellendorffii] gi|300159768|gb|EFJ26387.1| hypothetical protein SELMODRAFT_412920 [Selaginella moellendorffii] Length = 406 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/206 (33%), Positives = 113/206 (54%), Gaps = 22/206 (10%) Query: 135 NQAPYYAN-PGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTT 193 N P N PG G E ++ L+LK IAD+G++G PNAGKST L S+++AKP + YPFTT Sbjct: 194 NGLPRLENEPGEPGSEAVLILELKSIADVGLVGAPNAGKSTLLGSMSKAKPCVGSYPFTT 253 Query: 194 LYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS------- 245 L P +G V+ Y F +AD+PG+I+ AH+ G+G FL+H ERT V ++++ Sbjct: 254 LRPIIGRVEFPDYYCFSVADVPGLIEGAHENRGLGFHFLRHVERTKVFVYVLDASLGVAG 313 Query: 246 -----ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 A ++ Q Y E+ Y S + K+ IV +++D ++ + R EL + Sbjct: 314 REGDYAWDQLEQLKY-----EMECYRSGMTKRRSIVVANKMDEEGAEEVVR---ELRRRT 365 Query: 301 GQVPFEFSSITGHGIPQILECLHDKI 326 + ++ G G+ ++ E + + Sbjct: 366 DLPVYPVCAVLGEGVEELKEGMRQMV 391 >gi|189192805|ref|XP_001932741.1| mitochondrial GTPase 2 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187978305|gb|EDU44931.1| mitochondrial GTPase 2 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 375 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 104/187 (55%), Gaps = 18/187 (9%) Query: 99 EDGISLICDLDQEGQR-IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLK 157 E + DLD+ + +++A G GG GN HF + N P A G G + + L+LK Sbjct: 60 EPEAPMWLDLDKHMETPMLIAAGAMGGLGNPHFMTPYNSRPKIATRGDEGLKISLQLELK 119 Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--------------- 202 ++AD+G++GLPNAGKST L +++ ++ ++ ++ FTTL PN+G V Sbjct: 120 ILADLGLVGLPNAGKSTLLRALSNSRARVGNWAFTTLQPNVGTVVLDNHKGRPLVTSRRP 179 Query: 203 --EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD 260 E + F +AD+PG+I++AH G+G FL+H ER VL ++ + AA + + Sbjct: 180 NGELRENFTVADVPGLIEDAHLDKGLGLGFLRHIERAAVLAFVIDLSAGDAVAALKLLWR 239 Query: 261 ELSAYNS 267 E+S Y + Sbjct: 240 EVSEYET 246 >gi|330922285|ref|XP_003299782.1| hypothetical protein PTT_10841 [Pyrenophora teres f. teres 0-1] gi|311326440|gb|EFQ92140.1| hypothetical protein PTT_10841 [Pyrenophora teres f. teres 0-1] Length = 555 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 104/187 (55%), Gaps = 18/187 (9%) Query: 99 EDGISLICDLDQEGQR-IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLK 157 E + DLD+ + +++A G GG GN HF + N P A G G + + L+LK Sbjct: 240 EPEAPMWLDLDKHMETPMLIAAGAMGGLGNPHFMTPYNSRPKMATRGDEGLKISMQLELK 299 Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--------------- 202 ++AD+G++GLPNAGKST L +++ ++ ++ ++ FTTL PN+G V Sbjct: 300 ILADLGLVGLPNAGKSTLLRALSNSRARVGNWAFTTLQPNVGTVVLDNHKGRPLVTSRRP 359 Query: 203 --EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD 260 E + F +AD+PG+I++AH G+G FL+H ER VL ++ + AA + + Sbjct: 360 NGELRENFTVADVPGLIEDAHLDKGLGLGFLRHIERAAVLAFVIDLSAGDAVAALKLLWR 419 Query: 261 ELSAYNS 267 E+S Y + Sbjct: 420 EVSEYET 426 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 43/113 (38%), Positives = 64/113 (56%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + +G GG G +SF REK+IE G +GG GG GG+V+IQA +L + Sbjct: 76 FADRCILTVEAGAGGHGCVSFLREKYIEEGPANGGDGGSGGNVYIQAIRGETSLHKLARR 135 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRI 115 + KA G G + + G +G DV++TVPVGT V E I +++E ++ Sbjct: 136 RQIKAGRGRNGQGKVKGGERGTDVLITVPVGTIVRELQRHDPIAIMEKEHWKM 188 >gi|302666575|ref|XP_003024885.1| hypothetical protein TRV_00960 [Trichophyton verrucosum HKI 0517] gi|291188961|gb|EFE44274.1| hypothetical protein TRV_00960 [Trichophyton verrucosum HKI 0517] Length = 569 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 69/183 (37%), Positives = 106/183 (57%), Gaps = 16/183 (8%) Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 I+LA G GG GN HF S + P +A G G + L+LKL+AD+G++GLPNAGKST Sbjct: 262 IVLAAGAVGGLGNPHFVSKSIGRPMFATKGEQGMRLELELELKLLADVGLVGLPNAGKST 321 Query: 175 FLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKE---------------FILADIPGIIK 218 L S+T ++ ++ ++ FTTL PN+G +V + Y + F +ADIPG+I+ Sbjct: 322 LLRSITNSRTRVGNWAFTTLSPNIGTVVLDDYSQRKARLATPGRAPRPRFTIADIPGLIE 381 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 NAH G+G FL+H ER +L +V + A + + +EL AY S +++ + Sbjct: 382 NAHLDKGLGLGFLRHVERAGILAFVVDLSAGDAVTALKGLWNELGAYQSMRDRELSLDTQ 441 Query: 279 SQI 281 S++ Sbjct: 442 SRL 444 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 63/109 (57%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + +G GG+G ++F R K++E G +GG GG GG++ IQA +L + Sbjct: 81 FQDRCSLTVHTGSGGSGCVAFLRLKYLEHGPANGGDGGTGGNILIQAVEGQTSLHKLARR 140 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQE 111 KA G+ G +++ G +GEDV+L VPVGT V E + + + ++E Sbjct: 141 GVIKAGRGKNGRGKSQGGVRGEDVLLQVPVGTVVREIERFDPVAEKERE 189 >gi|50289843|ref|XP_447353.1| hypothetical protein [Candida glabrata CBS 138] gi|49526663|emb|CAG60290.1| unnamed protein product [Candida glabrata] Length = 543 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/199 (33%), Positives = 109/199 (54%), Gaps = 7/199 (3%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF ++ + P +A G G ++ +LK+IAD+G++GLPNAGKST L ++ AKP+I Sbjct: 334 NMHFLTNLIRNPRFAKHGRPGLDQYFLFELKMIADLGLVGLPNAGKSTLLTKISNAKPRI 393 Query: 187 ADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + FTTL P++G + G + +F +ADIPGIIK A Q G+G FL+H ER++ + ++ Sbjct: 394 GHWEFTTLEPSVGTISLGIQGPQFTVADIPGIIKGASQDKGMGIEFLRHIERSNGWVFVI 453 Query: 245 SALEENVQAAYQCILDELSAYNSELRKKIEIVG----LSQIDTVDSDTLARKKNELATQC 300 S + +++EL +K++ +V ++ T D R K E Sbjct: 454 SLENPDPLNDLNILINELGGQEIIKQKRVLVVANKADINHTSTESRDKYMRLK-EFCDSK 512 Query: 301 GQVPFEFSSITGHGIPQIL 319 G S++ H I ++L Sbjct: 513 GWDSIPISALHSHNIDKLL 531 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 2/94 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V SG GG G +SF R+ G PDGG GG GG +++QA S L++L R Sbjct: 111 FVDVRIVKCTSGKGGDGCVSFFRDAGRSIGPPDGGDGGHGGSIYVQAESGLDSLAKMR-- 168 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 + A G G GA+G+D+++TVP GT + Sbjct: 169 ATYVASDGGSGQSGQLDGARGKDILITVPTGTVI 202 >gi|326475237|gb|EGD99246.1| GTP-binding protein Obg [Trichophyton tonsurans CBS 112818] gi|326480419|gb|EGE04429.1| GTP-binding protein 5 [Trichophyton equinum CBS 127.97] Length = 574 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 69/183 (37%), Positives = 106/183 (57%), Gaps = 16/183 (8%) Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 I+LA G GG GN HF S + P +A G G + L+LKL+AD+G++GLPNAGKST Sbjct: 267 IVLAAGAVGGLGNPHFVSKSIGRPMFATKGEQGMRLELELELKLLADVGLVGLPNAGKST 326 Query: 175 FLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKE---------------FILADIPGIIK 218 L S+T ++ ++ ++ FTTL PN+G +V + Y + F +ADIPG+I+ Sbjct: 327 LLRSITNSRTRVGNWAFTTLSPNIGTVVLDDYSQRKARLATPGRAPRPRFTIADIPGLIE 386 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 NAH G+G FL+H ER +L +V + A + + +EL AY S +++ + Sbjct: 387 NAHLDKGLGLGFLRHVERAGILAFVVDLSAGDAVMALKGLWNELGAYQSMRDRELSLDTQ 446 Query: 279 SQI 281 S++ Sbjct: 447 SRL 449 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 63/109 (57%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + +G GG+G ++F R K++E G +GG GG GG++ IQA +L + Sbjct: 86 FQDRCSLTVHTGSGGSGCVAFLRLKYLEHGPANGGDGGTGGNILIQAVEGQTSLHKLARR 145 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQE 111 KA G+ G +++ G +GEDV+L VPVGT V E + + + ++E Sbjct: 146 GVIKAGRGKNGRGKSQGGVRGEDVLLQVPVGTVVREIERFDPVAEKERE 194 >gi|330800989|ref|XP_003288514.1| hypothetical protein DICPUDRAFT_16626 [Dictyostelium purpureum] gi|325081474|gb|EGC34989.1| hypothetical protein DICPUDRAFT_16626 [Dictyostelium purpureum] Length = 517 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 104/185 (56%), Gaps = 31/185 (16%) Query: 102 ISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIAD 161 +S D+D+ G+ +++ GG+GG GNA+F S +N++P Y+ PG G+ K I L+LK+IAD Sbjct: 214 VSKEIDMDEPGKELVICKGGHGGKGNANFSSGSNRSPDYSEPGTKGEIKYIELELKIIAD 273 Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------- 201 G++G PNAGKST L+ ++ A P I Y FTT+ P +G + Sbjct: 274 FGLVGFPNAGKSTLLSVISNAIPNIKSYAFTTMNPYVGTIDFIGSNNINNNSNNNNNNNI 333 Query: 202 -------KEGYKEFI----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 K+ + I +AD+PGI++ AH G+G FL+H ERT +++++ N Sbjct: 334 SLSRRRRKQKLEPTIDVASIADLPGILEGAHLNLGLGLGFLRHIERTKAIVYVIDMSNSN 393 Query: 251 VQAAY 255 V A + Sbjct: 394 VPAFW 398 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 45/98 (45%), Positives = 66/98 (67%), Gaps = 2/98 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F+D+ +V +++GDGG GGISF R K+I G PDGG+GG G +V I+A + N L + Sbjct: 40 LSFIDKIRVNVKAGDGGDGGISFYRAKYIPEGPPDGGNGGNGANVIIRADLDNNNLSHLK 99 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 +++ +HG KG+ R+G GED+VL VPVGT + E Sbjct: 100 --KNYVGKHGGKGLGERRAGGTGEDIVLRVPVGTVIRE 135 >gi|154276594|ref|XP_001539142.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150414215|gb|EDN09580.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 637 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 84/357 (23%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFG------------------------------ 32 F D + + +G GG G +SF REK+I+ G Sbjct: 155 FQDRCTLTLHAGSGGNGCVSFLREKYIDDGPANGGDGGSGGNIFIQAVEGETSLHKLARR 214 Query: 33 -------GPDGGSGGRGG----DVWIQAT--------SNLNTLID--FRYQQHFKAQHGE 71 G G RGG DV +Q L+ L++ R Q + E Sbjct: 215 GIIKAGHGRSGQGKSRGGQRGKDVLLQVPVGTVIREIGRLDPLVEEERRLAQLIREIGKE 274 Query: 72 KGMK-----RNR---------SGAKGEDVVLTVPVGTQVF--EEDGISLICDLDQE-GQR 114 KGM+ R R S ED + P + + DL + + Sbjct: 275 KGMRAASERRERWVFYPGSQPSDFLTEDFPVLPPARRSALATSQPKKPIYLDLSEHMPEP 334 Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 I+LA G GG GN +F S+TN P +A G G + + +LKL+AD+G++GLPNAGKST Sbjct: 335 ILLAAGAVGGLGNPNFVSNTNTKPRFATRGEKGLKLELEFELKLLADVGLVGLPNAGKST 394 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIV-------------KEGYKE---FILADIPGIIK 218 L S+T ++ ++ ++ FTTL PN+G V K G+ F +ADIPG+I+ Sbjct: 395 LLRSITNSRTRVGNWAFTTLSPNIGTVVIDDHSGRPFLESKPGHPRRTHFTIADIPGLIE 454 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 AH G+G FL+H ER +L ++ + A + + EL YN +K+ I Sbjct: 455 GAHLDKGLGLGFLRHIERAGILAFVIDLSAGDAVQALKGLWRELYEYNRLRERKLNI 511 >gi|156087543|ref|XP_001611178.1| hypothetical protein [Babesia bovis T2Bo] gi|154798432|gb|EDO07610.1| hypothetical protein BBOV_III000430 [Babesia bovis] Length = 385 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 88/255 (34%), Positives = 131/255 (51%), Gaps = 44/255 (17%) Query: 57 IDFRY-QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI------------- 102 +D R+ KA G G R SG G DV L +P+GT V++ + Sbjct: 80 VDLRHIPGAVKAPDGTIG-NRYASGRPGNDVKLKMPLGTLVYKLEPSFLHDSDKCWRQLC 138 Query: 103 -----SLICDL-DQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKL 156 SLI D+ D I+LA GG GG GN T + PY+A G E ++L Sbjct: 139 WSWKRSLIADINDASHSPILLARGGCGGRGN------TMRTPYHAEYGGEADEGYYEIEL 192 Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPG 215 K IADIG++GLPN GKST L+++TRA KIA YPFTT+ P +G I+ K +AD+PG Sbjct: 193 KSIADIGLVGLPNVGKSTLLSAMTRANSKIAAYPFTTIAPCIGYIMFTDGKSISVADLPG 252 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIV-------SALEENVQAAYQCILDELSAYNSE 268 I+ F +H ERT LL+++ S++EEN + + +++ + S Sbjct: 253 IVT-----CRFTQDFFRHIERTKALLYVIDVCNATCSSIEEN----FASLREQIHVHGSG 303 Query: 269 LRKKIEIVGLSQIDT 283 L +K ++ ++++D Sbjct: 304 LSEKPFVIVVTKMDV 318 >gi|224059494|ref|XP_002299874.1| predicted protein [Populus trichocarpa] gi|222847132|gb|EEE84679.1| predicted protein [Populus trichocarpa] Length = 191 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/180 (37%), Positives = 104/180 (57%), Gaps = 11/180 (6%) Query: 147 GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK 206 G E ++ L+LK IAD+G +G+PNAGKST L +++RAKP + Y FTTL PNLG V Sbjct: 1 GSEALLVLELKSIADVGFVGMPNAGKSTLLGAISRAKPAVGHYAFTTLRPNLGKVNFEDI 60 Query: 207 EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV---SALEEN----VQAAYQCIL 259 +ADIPG+IK AH+ G+G FL+H ERT VL +++ +AL N + ++ Sbjct: 61 SITVADIPGLIKGAHENRGLGHAFLRHIERTKVLAYVIDLAAALNGNKGLPPWEQLKDLV 120 Query: 260 DELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQI 318 EL + L + +V ++ID ++ + EL + VP + ++ G G+P++ Sbjct: 121 LELEHHQEGLSNRPALVVANKIDEAGAEDV---YEELKGRVRGVPLYPVCAVLGEGVPEL 177 >gi|17552324|ref|NP_498042.1| hypothetical protein C26E6.12 [Caenorhabditis elegans] gi|14550340|gb|AAK67213.1|U13875_12 Hypothetical protein C26E6.12 [Caenorhabditis elegans] Length = 390 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 93/308 (30%), Positives = 145/308 (47%), Gaps = 49/308 (15%) Query: 4 LDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLN-TLIDFRYQ 62 +D+ V I++G GG+G + G GG GGD++ A +L T I R + Sbjct: 27 IDKYLVNIKAGSGGSGLSRY------------NGVGGNGGDIYFVAKPSLAFTDIKKRLK 74 Query: 63 QHFK--AQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 K +++GE K G + VPVG +V + + LI + R ++A G Sbjct: 75 NKMKIRSENGEAATKIMLIGQHAKHQFFDVPVGIEVVDREKNKLIARCSKPFHRYLIARG 134 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+ +K S G + + LKL +IG++G PNAGKST L ++ Sbjct: 135 GEGGYSKIGYKGSK------------GDTFDVEIHLKLRPNIGLLGFPNAGKSTLLKALV 182 Query: 181 RAKP-KIADYPFTTLYPNLGIVKEGYKEF---------ILADIPGIIKNAHQGAGIGDRF 230 K KIADY FTT+ P + K +EF +AD+PGII+ A G G +F Sbjct: 183 PEKSVKIADYAFTTVNPQVAFFKNK-EEFSVEDPSFTLSIADLPGIIEGASMNRGKGYKF 241 Query: 231 LKHTERTHVLLHIVSA----LEENVQAAYQCILD-------ELSAYNSELRKKIEIVGLS 279 LKH E +++ +V L+ + ++ L+ E+ YN +L +K I L+ Sbjct: 242 LKHLEYADIVVMVVDCQGFQLKNELDCPFRNPLESIALLNREVELYNQKLARKPVICVLN 301 Query: 280 QIDTVDSD 287 +ID +D + Sbjct: 302 KIDALDEN 309 >gi|240279022|gb|EER42528.1| GTP-binding protein [Ajellomyces capsulatus H143] gi|325090281|gb|EGC43591.1| GTP-binding protein [Ajellomyces capsulatus H88] Length = 573 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 68/177 (38%), Positives = 102/177 (57%), Gaps = 16/177 (9%) Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 I+LA G GG GN +F S+TN P +A G G + + +LKL+AD+G++GLPNAGKST Sbjct: 271 ILLAAGAVGGLGNPNFVSNTNTKPRFATRGEKGLKLELEFELKLLADVGLVGLPNAGKST 330 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIV-------------KEGYKE---FILADIPGIIK 218 L S+T ++ ++ ++ FTTL PN+G V K G+ F +ADIPG+I+ Sbjct: 331 LLRSITNSRTRVGNWAFTTLSPNIGTVVIDDHSGRPFLESKPGHPRRTHFTIADIPGLIE 390 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 AH G+G FL+H ER +L ++ ++ A + + EL YN +K+ I Sbjct: 391 GAHLDKGLGLGFLRHIERAGILAFVIDLSAGDIVQALKGLWRELYEYNRLRERKLNI 447 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 3/113 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + +G GG G +SF REK+I+ G +GG GG GG+++IQA +L + Sbjct: 91 FQDRCALTLHAGSGGNGCVSFLREKYIDDGPANGGDGGSGGNIFIQAVEGETSLHKLARR 150 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRI 115 KA HG G ++R G +G+DV+L VPVGT + E I + L +E +R+ Sbjct: 151 GIIKAGHGRSGQGKSRGGQRGKDVLLQVPVGTVIRE---IGRLDPLVEEERRL 200 >gi|327294213|ref|XP_003231802.1| GTP-binding protein Obg [Trichophyton rubrum CBS 118892] gi|326465747|gb|EGD91200.1| GTP-binding protein Obg [Trichophyton rubrum CBS 118892] Length = 574 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 68/183 (37%), Positives = 105/183 (57%), Gaps = 16/183 (8%) Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 I+LA G GG GN HF S + P +A G G + L+LKL+AD+G++GLPNAGKST Sbjct: 267 IVLAAGAVGGLGNPHFVSKSIGRPMFATKGEQGMRLELELELKLLADVGLVGLPNAGKST 326 Query: 175 FLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKE---------------FILADIPGIIK 218 L S+T ++ ++ ++ FTTL P +G +V + Y + F +ADIPG+I+ Sbjct: 327 LLRSITNSRTRVGNWAFTTLSPKIGTVVLDDYSQRKARLATPGRAPRPRFTIADIPGLIE 386 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 NAH G+G FL+H ER +L +V + A + + +EL AY S +++ + Sbjct: 387 NAHMDKGLGLGFLRHVERAGILAFVVDLSAGDAVTALKGLWNELGAYQSMRDRELSLDTQ 446 Query: 279 SQI 281 S++ Sbjct: 447 SRL 449 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 63/109 (57%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + +G GG+G ++F R K++E G +GG GG GG++ IQA +L + Sbjct: 86 FQDRCSLTVHTGSGGSGCVAFLRLKYLEHGPANGGDGGTGGNILIQAVEGQTSLHKLARR 145 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQE 111 KA G+ G +++ G +GEDV+L VPVGT V E + + + ++E Sbjct: 146 GVIKAGRGKNGRGKSQGGVRGEDVLLQVPVGTVVREIERFDPVAEKERE 194 >gi|325119889|emb|CBZ55442.1| hypothetical protein NCLIV_058650 [Neospora caninum Liverpool] Length = 800 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 52/111 (46%), Positives = 80/111 (72%), Gaps = 3/111 (2%) Query: 138 PYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN 197 P+ A G G+EK+I ++LK IAD+G++G PNAGKS+ LA+++R P++A +PFTT PN Sbjct: 304 PHRAAGGEDGEEKVIQVELKSIADVGLVGFPNAGKSSILAALSRCSPRVAGFPFTTKAPN 363 Query: 198 LGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 +G V K G +AD+PG+++NAH G+G FL+H ERT +L++++ A Sbjct: 364 VGQVAFKNG-DTLAVADLPGLVQNAHLNEGLGHAFLRHCERTSLLVYVIDA 413 >gi|25395700|pir||H88444 protein C26E6.12 [imported] - Caenorhabditis elegans Length = 1802 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 93/308 (30%), Positives = 145/308 (47%), Gaps = 49/308 (15%) Query: 4 LDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLN-TLIDFRYQ 62 +D+ V I++G GG+G + G GG GGD++ A +L T I R + Sbjct: 27 IDKYLVNIKAGSGGSGLSRY------------NGVGGNGGDIYFVAKPSLAFTDIKKRLK 74 Query: 63 QHFK--AQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 K +++GE K G + VPVG +V + + LI + R ++A G Sbjct: 75 NKMKIRSENGEAATKIMLIGQHAKHQFFDVPVGIEVVDREKNKLIARCSKPFHRYLIARG 134 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG+ +K G G + + LKL +IG++G PNAGKST L ++ Sbjct: 135 GEGGYSKIGYK------------GSKGDTFDVEIHLKLRPNIGLLGFPNAGKSTLLKALV 182 Query: 181 RAKP-KIADYPFTTLYPNLGIVKEGYKEF---------ILADIPGIIKNAHQGAGIGDRF 230 K KIADY FTT+ P + K +EF +AD+PGII+ A G G +F Sbjct: 183 PEKSVKIADYAFTTVNPQVAFFK-NKEEFSVEDPSFTLSIADLPGIIEGASMNRGKGYKF 241 Query: 231 LKHTERTHVLLHIVSA----LEENVQAAYQCILD-------ELSAYNSELRKKIEIVGLS 279 LKH E +++ +V L+ + ++ L+ E+ YN +L +K I L+ Sbjct: 242 LKHLEYADIVVMVVDCQGFQLKNELDCPFRNPLESIALLNREVELYNQKLARKPVICVLN 301 Query: 280 QIDTVDSD 287 +ID +D + Sbjct: 302 KIDALDEN 309 >gi|150864275|ref|XP_001383028.2| Mitochondrial GTPase 2 [Scheffersomyces stipitis CBS 6054] gi|149385531|gb|ABN64999.2| Mitochondrial GTPase 2 [Scheffersomyces stipitis CBS 6054] Length = 488 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 98/161 (60%), Gaps = 4/161 (2%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF + + P ++ G G + L+LKLIAD+G++GLPNAGKST L +++RA+P++ Sbjct: 280 NMHFLTKDIRNPNFSKKGRDGIQTHFLLELKLIADLGLVGLPNAGKSTLLRAISRARPRV 339 Query: 187 ADYPFTTLYPNLGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + FTTL P +G + + F +ADIPGIIK A + G+G FL+H ER+ L+ +V Sbjct: 340 GHWEFTTLQPTVGTIFTTIDKDPFTVADIPGIIKGASENKGMGLDFLRHIERSGGLVFVV 399 Query: 245 SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 S EN A + +L+E+ + ++ K +V ++ D D Sbjct: 400 SLESENPVADLEVLLNEVGS--KRMKDKEVLVVATKADLTD 438 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 59/95 (62%), Gaps = 3/95 (3%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQ-ATSNLNTLIDFRY 61 F+D + +RSG+GG G +S+ R+ G PDGG GG GGDV+I A N+++L + Sbjct: 72 FIDLKVIKVRSGNGGNGCVSYFRDANRPSGPPDGGDGGDGGDVYISVAEKNMSSL--HKV 129 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 ++ ++A+HG G G GED+V+ VPVGT + Sbjct: 130 KRTYEAKHGTTGKGSQLDGKSGEDIVIEVPVGTTI 164 >gi|212533563|ref|XP_002146938.1| GTP-binding protein Obg [Penicillium marneffei ATCC 18224] gi|210072302|gb|EEA26391.1| GTP-binding protein Obg [Penicillium marneffei ATCC 18224] Length = 535 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 95/315 (30%), Positives = 139/315 (44%), Gaps = 49/315 (15%) Query: 9 VYIRSGDGGAGGISFRREKFIEFGGPDGGSGG-----RGGDVWIQATSNLNTLIDFRYQQ 63 +YI++ DG R+ I G G G RG DV IQ RY Sbjct: 119 IYIQAVDGLTSLHKLARQGTIRAGNGKNGQGKSRGGKRGHDVLIQVPVGTVVREVSRYDP 178 Query: 64 HFKAQHGEKGMK----------------RNR----SGAKGEDVVLTV------PVGTQVF 97 +A+H + +K R+R G+ D + T P + + Sbjct: 179 IEEAEHEYRTLKGTLSREEQAMGMYVAQRDRFVLYPGSLPSDFLTTTFPTLGPPRRSNLA 238 Query: 98 E-EDGISLICDLDQE-GQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLK 155 E + DL Q Q +LA G GGFGN HF + + P +A G G + + Sbjct: 239 ALEPPAPIHLDLSQPMEQPKLLAAGAVGGFGNPHFIARSMGRPKFATKGEGGMTLHLEFE 298 Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------- 201 LKL+AD+G++G PNAGKST L S+T ++ +I ++ FTTL PN+G V Sbjct: 299 LKLLADVGLVGFPNAGKSTLLRSLTNSRTRIGNWEFTTLSPNIGTVVLDDFKGRPKVESL 358 Query: 202 --KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL 259 K F +ADIPG++++AH G+G FL+H ER +L +V + Q + Sbjct: 359 NKKSPRTNFTIADIPGLVEDAHLDRGLGLGFLRHIERAGILGFVVDLSSADPVKTLQKLW 418 Query: 260 DELSAYNSELRKKIE 274 EL Y+ +IE Sbjct: 419 HELGEYDKLRNAEIE 433 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/109 (39%), Positives = 63/109 (57%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+ + +G GG G ++F REK+IE G P+GG GG GG ++IQA L +L Q Sbjct: 77 FQDKCTAKVVTGSGGNGCVAFLREKYIEEGPPNGGDGGSGGSIYIQAVDGLTSLHKLARQ 136 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQE 111 +A +G+ G ++R G +G DV++ VPVGT V E I + + E Sbjct: 137 GTIRAGNGKNGQGKSRGGKRGHDVLIQVPVGTVVREVSRYDPIEEAEHE 185 >gi|207344530|gb|EDZ71645.1| YHR168Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 228 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 65/168 (38%), Positives = 97/168 (57%), Gaps = 3/168 (1%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF ++ + P ++ PG G E+ +LK IAD+G+IGLPNAGKST L ++ AKPKI Sbjct: 17 NMHFLTNLIRNPRFSKPGRNGLEQHFLFELKSIADLGLIGLPNAGKSTILNKISNAKPKI 76 Query: 187 ADYPFTTLYPNLGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + FTTL P +G V G+ + F +ADIPGII+ A G+G FL+H ER++ + ++ Sbjct: 77 GHWQFTTLSPTIGTVSLGFGQDVFTVADIPGIIQGASLDKGMGLEFLRHIERSNGWVFVL 136 Query: 245 SALEENVQAAYQCILDELSAYNSELRKKIEIV-GLSQIDTVDSDTLAR 291 +N Q +++E+ K I IV ID S++ A+ Sbjct: 137 DLSNKNPLNDLQLLIEEVGTLEKVKTKNILIVCNKVDIDAEKSESFAK 184 >gi|330685061|gb|EGG96730.1| putative Obg family GTPase CgtA [Staphylococcus epidermidis VCU121] Length = 167 Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 71/158 (44%), Positives = 102/158 (64%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+ +++GDGG G ++RREK++ FGGP GG GG+G V + L TL+DFRYQ Sbjct: 2 FVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASVIFEVDEGLRTLLDFRYQ 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 HFKA+ GE G N G ED+VL VP GT V + ++ DL ++GQR I+A GG Sbjct: 62 THFKAKKGENGQSSNMHGRNAEDLVLKVPPGTIVKSVETEEVLADLVEDGQRAIVAKGGR 121 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIA 160 GG GN+ F + N AP ++ G G+E + L++K+I+ Sbjct: 122 GGRGNSRFATPRNPAPDFSENGEPGEEIDVTLRIKIIS 159 >gi|225560271|gb|EEH08553.1| GTP-binding protein Obg [Ajellomyces capsulatus G186AR] Length = 573 Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 68/177 (38%), Positives = 101/177 (57%), Gaps = 16/177 (9%) Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 I+LA G GG GN +F S+TN P +A G G + + +LKL+AD+G++GLPNAGKST Sbjct: 271 ILLAAGAVGGLGNPNFVSNTNTKPRFATRGEKGLKLELEFELKLLADVGLVGLPNAGKST 330 Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIV-------------KEGYKE---FILADIPGIIK 218 L S+T ++ ++ ++ FTTL PN+G V K G+ F +ADIPG+I+ Sbjct: 331 LLRSITNSRTRVGNWAFTTLSPNIGTVVIDDHSGRPFLESKPGHPRRTHFTIADIPGLIE 390 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 AH G+G FL+H ER +L ++ + A + + EL YN +K+ I Sbjct: 391 GAHLDKGLGLGFLRHIERAGILAFVIDLSAGDAVQALKGLWRELYEYNRLRERKLNI 447 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 3/113 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + +G GG G +SF REK+I+ G +GG GG GG+++IQA +L + Sbjct: 91 FQDRCTLTLHAGSGGNGCVSFLREKYIDDGPANGGDGGSGGNIFIQAVEGETSLHKLARR 150 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRI 115 KA HG G ++R G +G+DV+L VPVGT + E I + L +E +R+ Sbjct: 151 GIIKAGHGRSGQGKSRGGQRGKDVLLQVPVGTVIRE---IGRLDPLVEEERRL 200 >gi|50302589|ref|XP_451230.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640361|emb|CAH02818.1| KLLA0A05225p [Kluyveromyces lactis] Length = 562 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/198 (32%), Positives = 112/198 (56%), Gaps = 7/198 (3%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF +S + P + G G ++ +LK IAD+G++GLPNAGKST L ++ A P++ Sbjct: 357 NMHFLTSLIRNPRFCKEGRSGLQQHFMFELKSIADLGLVGLPNAGKSTILNQISNATPRV 416 Query: 187 ADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + FTTL+P +G + G +F +ADIPGIIK+A Q G+G FL+H ER+ + ++ Sbjct: 417 GHWEFTTLHPTIGTISLGIDKPKFTVADIPGIIKDASQDKGMGLEFLRHIERSKGWVFVI 476 Query: 245 SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP 304 S +++ Q +++E+ K I +V ++ D +D + +K ++ QC + Sbjct: 477 SLEKDDPSQDLQILIEEVGGKEVVSLKNILVV-CNKAD-IDEKSTFKKYQKIQAQCQENN 534 Query: 305 FE---FSSITGHGIPQIL 319 ++ S++ G I +L Sbjct: 535 WDVVPISALKGENIDVLL 552 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 2/94 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D + SG+GG G ISF R++ G PDGG GG GG V++QA +N+L + Q Sbjct: 135 FVDLRIIKCASGNGGDGCISFFRDRGRAIGPPDGGDGGGGGSVYVQAIEGINSL--SKLQ 192 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 + A +G G G+KG+DV++TVPVGT V Sbjct: 193 TTYIADNGSNGTSAQADGSKGKDVMITVPVGTVV 226 >gi|330443587|ref|NP_012038.2| Mtg2p [Saccharomyces cerevisiae S288c] gi|115502420|sp|P38860|MTG2_YEAST RecName: Full=GTPase MTG2, mitochondrial; AltName: Full=Mitochondrial GTPase 2; Flags: Precursor gi|49354655|gb|AAT65075.1| mitochondrial Mtg2p [Saccharomyces cerevisiae] gi|256273962|gb|EEU08880.1| Mtg2p [Saccharomyces cerevisiae JAY291] gi|329136680|tpg|DAA06861.2| TPA: Mtg2p [Saccharomyces cerevisiae S288c] Length = 518 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 75/216 (34%), Positives = 116/216 (53%), Gaps = 13/216 (6%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF ++ + P ++ PG G E+ +LK IAD+G+IGLPNAGKST L ++ AKPKI Sbjct: 307 NMHFLTNLIRNPRFSKPGRNGLEQHFLFELKSIADLGLIGLPNAGKSTILNKISNAKPKI 366 Query: 187 ADYPFTTLYPNLGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + FTTL P +G V G+ + F +ADIPGII+ A G+G FL+H ER++ + ++ Sbjct: 367 GHWQFTTLSPTIGTVSLGFGQDVFTVADIPGIIQGASLDKGMGLEFLRHIERSNGWVFVL 426 Query: 245 SALEENVQAAYQCILDELSAYNSELRKKIEIV-GLSQIDTVDSDTLAR----KKNELATQ 299 +N Q +++E+ K I IV ID S++ A+ +K + + Sbjct: 427 DLSNKNPLNDLQLLIEEVGTLEKVKTKNILIVCNKVDIDAEKSESFAKYLQVEKFSKSQE 486 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 VP S++ I + L K+F ++EF Sbjct: 487 WDCVP--ISALREENI----DVLKKKMFKCARQSEF 516 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 2/94 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V +SG GG+G +SF R+ G PDGG GG GG V+IQA + L +L + + Sbjct: 91 FVDVRIVKCKSGAGGSGAVSFFRDAGRSIGPPDGGDGGAGGSVYIQAVAGLGSLA--KMK 148 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 + A+ GE G R G +G DV++ VPVGT V Sbjct: 149 TTYTAEDGEAGAARQLDGMRGRDVLIQVPVGTVV 182 >gi|323354702|gb|EGA86537.1| Mtg2p [Saccharomyces cerevisiae VL3] Length = 518 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/168 (38%), Positives = 97/168 (57%), Gaps = 3/168 (1%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF ++ + P ++ PG G E+ +LK IAD+G+IGLPNAGKST L ++ AKPKI Sbjct: 307 NMHFLTNLIRNPRFSKPGRNGLEQHFLFELKSIADLGLIGLPNAGKSTILNKISNAKPKI 366 Query: 187 ADYPFTTLYPNLGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + FTTL P +G V G+ + F +ADIPGII+ A G+G FL+H ER++ + ++ Sbjct: 367 GHWQFTTLSPTIGTVSLGFGQDVFTVADIPGIIQGASLDKGMGLEFLRHIERSNGWVFVL 426 Query: 245 SALEENVQAAYQCILDELSAYNSELRKKIEIV-GLSQIDTVDSDTLAR 291 +N Q +++E+ K I IV ID S++ A+ Sbjct: 427 DLSNKNPLNDLQLLIEEVGTLEKVKTKNILIVCNKVDIDAEKSESFAK 474 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 2/94 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V +SG GG+G +SF R+ G PDGG GG GG V+IQA + L +L + + Sbjct: 91 FVDVRIVKCKSGAGGSGAVSFFRDAGRSIGPPDGGDGGAGGSVYIQAVAGLGSLA--KMK 148 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 + A+ GE G R G +G DV++ VPVGT V Sbjct: 149 TTYTAEDGEAGAARQLDGMRGRDVLIQVPVGTVV 182 >gi|151944114|gb|EDN62407.1| GTPase [Saccharomyces cerevisiae YJM789] Length = 518 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/168 (38%), Positives = 97/168 (57%), Gaps = 3/168 (1%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF ++ + P ++ PG G E+ +LK IAD+G+IGLPNAGKST L ++ AKPKI Sbjct: 307 NMHFLTNLIRNPRFSKPGRNGLEQHFLFELKSIADLGLIGLPNAGKSTILNKISNAKPKI 366 Query: 187 ADYPFTTLYPNLGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + FTTL P +G V G+ + F +ADIPGII+ A G+G FL+H ER++ + ++ Sbjct: 367 GHWQFTTLSPTIGTVSLGFGQDVFTVADIPGIIQGASLDKGMGLEFLRHIERSNGWVFVL 426 Query: 245 SALEENVQAAYQCILDELSAYNSELRKKIEIV-GLSQIDTVDSDTLAR 291 +N Q +++E+ K I IV ID S++ A+ Sbjct: 427 DLSNKNPLNDLQLLIEEVGTLEKVKTKNILIVCNKVDIDAEKSESFAK 474 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 2/94 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V +SG GG+G +SF R+ G PDGG GG GG V+IQA + L +L + + Sbjct: 91 FVDVRIVKCKSGAGGSGAVSFFRDAGRSIGPPDGGDGGAGGSVYIQAVAGLGSLA--KMK 148 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 + A+ GE G R G +G DV++ VPVGT V Sbjct: 149 TTYTAEDGEAGAARQLDGMRGRDVLILVPVGTVV 182 >gi|323304639|gb|EGA58402.1| Mtg2p [Saccharomyces cerevisiae FostersB] gi|323308783|gb|EGA62021.1| Mtg2p [Saccharomyces cerevisiae FostersO] Length = 518 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/168 (38%), Positives = 97/168 (57%), Gaps = 3/168 (1%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF ++ + P ++ PG G E+ +LK IAD+G+IGLPNAGKST L ++ AKPKI Sbjct: 307 NMHFLTNLIRNPRFSKPGRNGLEQHFLFELKSIADLGLIGLPNAGKSTILNKISNAKPKI 366 Query: 187 ADYPFTTLYPNLGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + FTTL P +G V G+ + F +ADIPGII+ A G+G FL+H ER++ + ++ Sbjct: 367 GHWQFTTLSPTIGTVSLGFGQDVFTVADIPGIIQGASLDKGMGLEFLRHIERSNGWVFVL 426 Query: 245 SALEENVQAAYQCILDELSAYNSELRKKIEIV-GLSQIDTVDSDTLAR 291 +N Q +++E+ K I IV ID S++ A+ Sbjct: 427 DLSNKNPLNDLQLLIEEVGTLEKVKTKNILIVCNKVDIDAEKSESFAK 474 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 2/94 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V +SG GG+G +SF R+ G PDGG GG GG V+IQA + L +L + + Sbjct: 91 FVDVRIVKCKSGAGGSGAVSFFRDAGRSIGPPDGGDGGAGGSVYIQAVAGLGSLA--KMK 148 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 + A+ GE G R G +G DV++ VPVGT V Sbjct: 149 TTYTAEDGEAGAARQLDGMRGRDVLIQVPVGTVV 182 >gi|259146926|emb|CAY80182.1| Mtg2p [Saccharomyces cerevisiae EC1118] gi|323348320|gb|EGA82569.1| Mtg2p [Saccharomyces cerevisiae Lalvin QA23] Length = 518 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/168 (38%), Positives = 97/168 (57%), Gaps = 3/168 (1%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF ++ + P ++ PG G E+ +LK IAD+G+IGLPNAGKST L ++ AKPKI Sbjct: 307 NMHFLTNLIRNPRFSKPGRNGLEQHFLFELKSIADLGLIGLPNAGKSTILNKISNAKPKI 366 Query: 187 ADYPFTTLYPNLGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + FTTL P +G V G+ + F +ADIPGII+ A G+G FL+H ER++ + ++ Sbjct: 367 GHWQFTTLSPTIGTVSLGFGQDVFTVADIPGIIQGASLDKGMGLEFLRHIERSNGWVFVL 426 Query: 245 SALEENVQAAYQCILDELSAYNSELRKKIEIV-GLSQIDTVDSDTLAR 291 +N Q +++E+ K I IV ID S++ A+ Sbjct: 427 DLSNKNPLNDLQLLIEEVGTLEKVKTKNILIVCNKVDIDAEKSESFAK 474 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 2/94 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V +SG GG+G +SF R+ G PDGG GG GG V+IQA + L +L + + Sbjct: 91 FVDVRIVKCKSGAGGSGAVSFFRDAGRSIGPPDGGDGGAGGSVYIQAVAGLGSLA--KMK 148 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 + A+ GE G R G +G DV++ VPVGT V Sbjct: 149 TTYTAEDGEAGAARQLDGMRGRDVLIQVPVGTVV 182 >gi|458902|gb|AAB68013.1| Yhr168wp [Saccharomyces cerevisiae] Length = 499 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/168 (38%), Positives = 97/168 (57%), Gaps = 3/168 (1%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF ++ + P ++ PG G E+ +LK IAD+G+IGLPNAGKST L ++ AKPKI Sbjct: 307 NMHFLTNLIRNPRFSKPGRNGLEQHFLFELKSIADLGLIGLPNAGKSTILNKISNAKPKI 366 Query: 187 ADYPFTTLYPNLGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + FTTL P +G V G+ + F +ADIPGII+ A G+G FL+H ER++ + ++ Sbjct: 367 GHWQFTTLSPTIGTVSLGFGQDVFTVADIPGIIQGASLDKGMGLEFLRHIERSNGWVFVL 426 Query: 245 SALEENVQAAYQCILDELSAYNSELRKKIEIV-GLSQIDTVDSDTLAR 291 +N Q +++E+ K I IV ID S++ A+ Sbjct: 427 DLSNKNPLNDLQLLIEEVGTLEKVKTKNILIVCNKVDIDAEKSESFAK 474 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 2/94 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V +SG GG+G +SF R+ G PDGG GG GG V+IQA + L +L + + Sbjct: 91 FVDVRIVKCKSGAGGSGAVSFFRDAGRSIGPPDGGDGGAGGSVYIQAVAGLGSLA--KMK 148 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 + A+ GE G R G +G DV++ VPVGT V Sbjct: 149 TTYTAEDGEAGAARQLDGMRGRDVLIQVPVGTVV 182 >gi|242778441|ref|XP_002479239.1| JmjC domain protein, putative [Talaromyces stipitatus ATCC 10500] gi|218722858|gb|EED22276.1| JmjC domain protein, putative [Talaromyces stipitatus ATCC 10500] Length = 1075 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/178 (36%), Positives = 94/178 (52%), Gaps = 16/178 (8%) Query: 113 QRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGK 172 Q +LA G GGFGN HF + P +A G G + +LKL+AD+G++G PNAGK Sbjct: 256 QPKLLAAGAVGGFGNPHFVARNMGRPKFATKGEGGMTLHLEFELKLLADVGLVGFPNAGK 315 Query: 173 STFLASVTRAKPKIADYPFTTLYPNLGIV----------------KEGYKEFILADIPGI 216 ST L S+T ++ +I ++ FTTL PN+G V K F +ADIPG+ Sbjct: 316 STLLRSLTNSRTRIGNWEFTTLSPNIGTVVLDDFKGRPRVESSNKKSPRTNFTIADIPGL 375 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 +++AH G+G FL+H ER +L +V + Q + EL Y+ +IE Sbjct: 376 VEDAHLDRGLGLGFLRHIERAGILGFVVDLSSADPVKTLQKLWHELGEYDKLRNAEIE 433 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 41/96 (42%), Positives = 58/96 (60%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+ + +G GG G ++F REK+IE G P+GG GG GG ++IQA L +L Q Sbjct: 77 FQDKCTAKLVAGSGGNGCVAFLREKYIEEGPPNGGDGGSGGSIYIQAIDGLTSLHKLARQ 136 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 +A G+ G ++R G +G DV++ VPVGT V E Sbjct: 137 GTIRAGRGKNGQGKSRGGKRGHDVLIQVPVGTVVRE 172 >gi|255027715|ref|ZP_05299701.1| GTPase ObgE [Listeria monocytogenes FSL J2-003] Length = 261 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 102/163 (62%), Gaps = 9/163 (5%) Query: 170 AGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGD 228 GKST L+ V+ A+PKIA Y FTT+ PNLG+V G + F++AD+PG+I+ A QG G+G Sbjct: 1 VGKSTLLSVVSAARPKIAAYHFTTIVPNLGMVDAGDGRSFVMADLPGLIEGASQGVGLGH 60 Query: 229 RFLKHTERTHVLLHIV--SALEENVQAA-YQCILDELSAYNSELRKKIEIVGLSQIDTVD 285 +FL+H ERT V++H++ S E V Y I +EL YN L ++ +I+ +++D D Sbjct: 61 QFLRHIERTRVIVHVIDMSGSEGRVPYEDYMAINNELEQYNLRLMERPQIIVANKMDMPD 120 Query: 286 SDTLARKKNELATQCGQ-VP-FEFSSITGHGIPQILECLHDKI 326 ++ NE T+ + +P F S++T G+ ++L + DK+ Sbjct: 121 AE---ENLNEFKTKIAEDIPVFPISAVTKTGLRELLLAIADKL 160 >gi|258563288|ref|XP_002582389.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237907896|gb|EEP82297.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 361 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 70/177 (39%), Positives = 101/177 (57%), Gaps = 17/177 (9%) Query: 106 CDLDQEGQR-IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 DL Q + ++LA G GG+GN HF S +N P +A G G + L+LKL+AD+G+ Sbjct: 46 LDLSQPMDKPMLLAAGAVGGYGNPHFVSRSNPRPIFATRGEDGMSLELELELKLLADVGL 105 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------KEGYK---EF 208 +GLPNAGKST L S+T ++ +I ++ FTTL PN+G V K G K F Sbjct: 106 VGLPNAGKSTLLRSITNSRARIGNWAFTTLSPNIGTVVLDNLTGRPFTQSKPGAKPRSRF 165 Query: 209 ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 +ADIPG++++AH G+G FL+H ER +L +V + A + + EL Y Sbjct: 166 TIADIPGLVEDAHLNKGLGLGFLRHIERAGILAFVVDLSAGDAVQALKGLWRELDEY 222 >gi|50549883|ref|XP_502413.1| YALI0D04697p [Yarrowia lipolytica] gi|49648281|emb|CAG80601.1| YALI0D04697p [Yarrowia lipolytica] Length = 527 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 110/190 (57%), Gaps = 6/190 (3%) Query: 76 RNRSGAKGEDVVL-TVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSST 134 R + K +D VL + T VF DG+ L C+ + Q +L GG GG GN + Sbjct: 268 RTKEATKFDDAVLRSTEEATDVFPVDGLDL-CEPGKPPQ--LLLKGGAGGAGNMRYHRDD 324 Query: 135 NQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL 194 + P +A G G L+LKL+AD+G++GLPNAGKST L +++RA P++ + FTTL Sbjct: 325 IRNPKFAKLGRSGITATFMLELKLLADLGLVGLPNAGKSTLLGAISRASPRVGHWEFTTL 384 Query: 195 YPNLGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 +P +G + G + F +ADIPGIIK A G+G FL+H ER++ L+ +++ + Sbjct: 385 HPTIGTISVGMDKPSFTVADIPGIIKGARINKGMGLDFLRHVERSNGLVFVIALDRPDPV 444 Query: 253 AAYQCILDEL 262 + + ++ EL Sbjct: 445 SDLRVLIGEL 454 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 2/94 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD V +G GG G +SF RE + +G DGG GG GG V+IQA ++ TL + ++ Sbjct: 81 FLDVRLVKCSAGKGGNGRVSFAREAMMPYGPADGGDGGEGGSVYIQAVDSIRTLKNLSFK 140 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 + A G+ G + G +G DV+L VPVGT V Sbjct: 141 --YMAGAGKAGGSSHMYGHRGTDVLLQVPVGTVV 172 >gi|84999412|ref|XP_954427.1| GTP-binding protein [Theileria annulata] gi|65305425|emb|CAI73750.1| GTP-binding protein, putative [Theileria annulata] Length = 582 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 93/295 (31%), Positives = 152/295 (51%), Gaps = 22/295 (7%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 K +D + + GDGG G +SFRREK + GG +GG+GG GGDV+IQ +++ L F Sbjct: 67 KLVDLCVIKVSGGDGGDGCMSFRREKHVPLGGANGGNGGPGGDVYIQCDESVSDLRWFDT 126 Query: 62 QQHFKAQHGEKGMKRNRSGA----------KGEDVVLTVPVGTQVFEEDGISLICDLDQE 111 + +KA+ G G N++G KG+D+ L VP GT + E+ + L + Sbjct: 127 NKLYKAEDGVNGKGSNKNGVSPNFIYIPNGKGKDMYLYVPKGTVITSEENVQ--ATLQND 184 Query: 112 GQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAG 171 G ++ +A GG GG GN HF + N P G G ++I+ L K +DI +IG PN+G Sbjct: 185 GDKVRIARGGRGGKGNRHFITKFNVDPRICERGEEGIKRIVKLIYKRYSDIALIGKPNSG 244 Query: 172 KSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG--------IIKNAHQG 223 KS+ + +T AKP+IA++PF+T +P G++ + I D+ +I+ H+ Sbjct: 245 KSSIIKRLTNAKPRIANFPFSTKFPIHGVLINNQE--ITDDVDSSNNTSNSDVIETEHED 302 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + + + ++ + D + NSE+RK+I +V + Sbjct: 303 GDLGYEYEEEFDSCGYDSDEDIDEQDEDIDEMDQMDDSVEVGNSEMRKRISLVDV 357 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 E K L D+PG+I + QG G+G FL+ E +++L +I+ + ++ Y+ + EL Sbjct: 347 EMRKRISLVDVPGLIDGSSQGKGLGHDFLRQIENSNILSYIIDSSNQDPLEDYKSVRREL 406 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILEC 321 YN E+ K+EI+ L++ID +D+ T+ N F S+ TG + + Sbjct: 407 EIYNPEILNKMEIILLNKIDLIDNQTIFNLINSFLKHVNHDQIYFISAKTGENM-DFISS 465 Query: 322 LHDKIFS 328 L K+FS Sbjct: 466 LFQKLFS 472 >gi|303284477|ref|XP_003061529.1| predicted protein [Micromonas pusilla CCMP1545] gi|226456859|gb|EEH54159.1| predicted protein [Micromonas pusilla CCMP1545] Length = 243 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 20/207 (9%) Query: 141 ANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI 200 A+ G G + + L+LK +AD+G++GLPNAGKST L +++ A+P +ADY FTT+ P LG Sbjct: 32 ADKGADGGKLTVVLELKSVADLGLVGLPNAGKSTLLRAISDARPNVADYAFTTMSPQLGA 91 Query: 201 VKE--GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENV------- 251 VK G +ADIPG+IK AH+ G+G FL+H ER L +V L + Sbjct: 92 VKLDGGLSSVTVADIPGLIKGAHENRGLGHNFLRHVERCAAFLFVVD-LSSGMGDRPGMR 150 Query: 252 -QAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLA---RKKNELATQCGQVPFEF 307 A + + EL AY L + IV ++ D + A R++ +L C Sbjct: 151 PWEALKVLRAELDAYLPGLSNRPAIVVGTKTDVARTSKAAEALRRRTDLPVVC------V 204 Query: 308 SSITGHGIPQILECLHDKIFSIRGENE 334 S+ GI +L D + + E + Sbjct: 205 SANASEGIDALLSATEDLLERAKRERD 231 >gi|170095197|ref|XP_001878819.1| predicted protein [Laccaria bicolor S238N-H82] gi|164646123|gb|EDR10369.1| predicted protein [Laccaria bicolor S238N-H82] Length = 182 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/169 (36%), Positives = 98/169 (57%), Gaps = 11/169 (6%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT--RAKP 184 N HF ++ N++P +A G G+ + L+LKL+AD+G++G+PNAGKST L ++T RAK Sbjct: 12 NPHFTTTDNRSPKFATRGQEGERITLSLELKLLADVGLVGMPNAGKSTLLRALTGGRAKS 71 Query: 185 KIADYPFTTLYPNLGI--VKEGYK-------EFILADIPGIIKNAHQGAGIGDRFLKHTE 235 +IA Y FTTL P +GI ++ G+ F +AD PG+I A + G+G FL+ E Sbjct: 72 EIAGYAFTTLNPIVGITRIRHGHHFDLFESFRFTIADNPGLISRASENVGLGHAFLRSME 131 Query: 236 RTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 R+ L+++V N + + +EL Y + K +V ++ D + Sbjct: 132 RSLALVYVVDLSAPNPWDELRVLFEELEKYQPGMSSKARMVVANKADLL 180 >gi|255721751|ref|XP_002545810.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240136299|gb|EER35852.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 537 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 62/153 (40%), Positives = 91/153 (59%), Gaps = 3/153 (1%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF + + P + G G L+LKLIAD+G++GLPNAGKS+ L +++RA P++ Sbjct: 326 NMHFTTKDIKGPKFCKAGRPGITTSFLLELKLIADLGLVGLPNAGKSSLLRAISRATPRV 385 Query: 187 ADYPFTTLYPNLGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + FTTL P +G + E F +ADIPGIIK A Q G+G FL+H ER+ L+ +V Sbjct: 386 GHWEFTTLQPTVGTIFRRMDEEPFTVADIPGIIKGASQNKGMGLDFLRHIERSGGLVFVV 445 Query: 245 SALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 S +N A + +L+E+ + KK+ IV Sbjct: 446 SLGSKNPVADLEILLEEVGPKRMK-DKKVLIVA 477 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 9/98 (9%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWI----QATSNLNTLID 58 F+D + I SG+GG G +SF ++ F FG DGG GG GG+V+I Q +S+L+ L Sbjct: 118 FIDLKLIKITSGNGGNGSVSFFKDSFKPFGPADGGDGGNGGNVFINVIDQHSSSLHGL-- 175 Query: 59 FRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 ++ + A++G+ G G GEDV++ VP+GT + Sbjct: 176 ---KKRYIAKNGQPGRSSQLDGKNGEDVIIDVPLGTVI 210 >gi|320582195|gb|EFW96413.1| Mitochondrial GTPase 2 [Pichia angusta DL-1] Length = 547 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 58/167 (34%), Positives = 97/167 (58%), Gaps = 2/167 (1%) Query: 129 HFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIAD 188 HF +S + P +A G G E+ +LKL+AD G++GLPNAGKST L +++ A+P++ Sbjct: 345 HFLTSNVRNPRFAKMGRSGLEQNFIFELKLLADFGLVGLPNAGKSTLLRAISNARPRVGH 404 Query: 189 YPFTTLYPNLGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 + FTTL P +G ++ + F +ADIPG++K A + G+G FL+H ER+ L+ ++S Sbjct: 405 WEFTTLQPTIGTIQLRIDQPPFTVADIPGVVKGASENRGMGLTFLRHVERSGGLVFVISL 464 Query: 247 LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 EN + +L E+ E + + + + +D +S L K+ Sbjct: 465 GSENPVEDLKVLLQEMGPQRMENKNVLIVATKADLDGAESRFLKLKE 511 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 2/95 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D V +RSG GG G +SF R+ I G PDGG GG GG++++ A L++L + + Sbjct: 134 FADLKVVKVRSGKGGNGAVSFFRDTGIAVGPPDGGDGGDGGNIYVSAVEGLSSLHSIKAK 193 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVF 97 + A G G G +GE+V + VPVGT + Sbjct: 194 --YVAGDGGNGQSGQLDGKRGENVYIQVPVGTTMM 226 >gi|85001522|ref|XP_955477.1| GTP-binding protein [Theileria annulata strain Ankara] gi|65303623|emb|CAI76001.1| GTP-binding protein, putative [Theileria annulata] Length = 347 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 103/308 (33%), Positives = 156/308 (50%), Gaps = 43/308 (13%) Query: 3 FLDEAKVYIRSGDGGAGGISFRRE---KFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDF 59 F+D ++ G GG G ++F + + G P GG GG GG+V+ + LN DF Sbjct: 23 FVDIKRIKCIGGKGGDGALAFSKHGPHHLLGPGLPVGGRGGNGGNVYAEPIKKLNERSDF 82 Query: 60 R-YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI---------------S 103 ++G G G GEDV+L +P+GTQ+++ + + + Sbjct: 83 SSIPSVVVGKNGSPGKGNRIRGNNGEDVLLRMPIGTQIYKFEPLGDLENWRNLCDNWSKN 142 Query: 104 LICDLDQ-EGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADI 162 LI D D E +R++LA GG GG GN PY + G +E L+LKLIAD+ Sbjct: 143 LIADFDSIECERVLLASGGLGGLGNNF------STPYESEFGTEPEENYYELQLKLIADV 196 Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNA 220 G++GLPN GKST +++TR K+ +YPFTTL P +G VK +G + + D+PGII Sbjct: 197 GLLGLPNVGKSTLFSTITRCVSKVGNYPFTTLSPYVGYVKFNDGV-DLSIVDLPGIID-- 253 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALE------ENVQAAYQCILDELSAYNSELRKKIE 274 G + FL H ER ++L+++ EN +C ++L YN L +K Sbjct: 254 ---CGKENLFLSHLERVRLILYLIDPCNPTHNCIENFNTL-RCFREKLIGYN--LSEKPF 307 Query: 275 IVGLSQID 282 I+ S++D Sbjct: 308 IIVTSKMD 315 >gi|321225275|gb|EFX50334.1| GTP-binding protein Obg [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 130 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 62/121 (51%), Positives = 91/121 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA + + +GDGG G +SFRREK+I GGPDGG GG GGDVW++A NLNTLID+R Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 +++ F+A+ G+ G R+ +G +G+DV + VPVGT+V ++ + D+ + GQR+++A G Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 G 121 G Sbjct: 121 G 121 >gi|116196512|ref|XP_001224068.1| hypothetical protein CHGG_04854 [Chaetomium globosum CBS 148.51] gi|88180767|gb|EAQ88235.1| hypothetical protein CHGG_04854 [Chaetomium globosum CBS 148.51] Length = 505 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 38/214 (17%) Query: 90 VPVGTQVFEEDGISLICDLDQEGQR-IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQ 148 +P ++ ++ + DL + R I+LA GG GG GN HF + P +A G Sbjct: 163 LPNRERLLQQPKAPIQLDLSRPTPRPILLAVGGIGGLGNPHFVTKGTPKPMFATRGEGAV 222 Query: 149 EKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------ 202 I L+LKL+AD+G++GLPNAGKST L S++ ++ ++ ++ FTTL PN+G V Sbjct: 223 SMEIELELKLLADVGLVGLPNAGKSTLLRSISNSRTRVGNWAFTTLQPNIGTVVLDNNKG 282 Query: 203 -------------------------------EGYKEFILADIPGIIKNAHQGAGIGDRFL 231 E F +ADIPG+I+ AH G+G FL Sbjct: 283 RPVLTSYRKVSDASPLRDDPFNLSAEPQPGLERRTRFTIADIPGLIEGAHLDKGLGIAFL 342 Query: 232 KHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 +H ER VL ++ N A + + +E+ Y Sbjct: 343 RHVERAGVLAFVLDLGAGNAVQALKALWNEVGLY 376 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/96 (43%), Positives = 61/96 (63%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+AK+ + +G+GG G ISF RE ++E G +GG GG GG+++IQA +L + Sbjct: 4 FADKAKLNLYAGNGGHGCISFLREAYLEDGPANGGDGGHGGNIYIQAVHGETSLHKLSRR 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 + +A G+ GM R G +G+DVV+ VPVGT V E Sbjct: 64 KIVRAGKGKSGMGGARGGRRGDDVVIAVPVGTVVRE 99 >gi|320590416|gb|EFX02859.1| methyltransferase [Grosmannia clavigera kw1407] Length = 1467 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 66/194 (34%), Positives = 97/194 (50%), Gaps = 31/194 (15%) Query: 112 GQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAG 171 Q I+LA GG GG GN HF S P A G I L+L+L+AD+G++GLPNAG Sbjct: 298 AQPILLASGGVGGLGNPHFLSRKMPRPVVATKGEAAVSMTINLELRLLADVGLVGLPNAG 357 Query: 172 KSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGYKE------- 207 KST L +++ ++ ++ + FTTL PN+G V G + Sbjct: 358 KSTLLRALSNSRARVGSWAFTTLQPNIGTVVLDSNRGRPLVAVRPASSHGSSDTGESTDT 417 Query: 208 ------FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDE 261 F +ADIPG+I+ AH G+G FL+H ER VL +V + A + + E Sbjct: 418 LPPRTRFTVADIPGLIEGAHLDKGLGIAFLRHVERAGVLAFVVDLGAGDAVKAVKALWTE 477 Query: 262 LSAYNSELRKKIEI 275 + Y + +R + E+ Sbjct: 478 VGLY-ARMRDEEEL 490 Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 43/105 (40%), Positives = 63/105 (60%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+A + + +G GG G ISF R+ F+ G P+GG GG GG+V+IQA +L + Sbjct: 80 FADKATLTVHAGVGGQGCISFLRDLFLPDGPPNGGDGGHGGNVYIQAVPGETSLHKIARR 139 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICD 107 + +A G+ G R+G +G+DV++TVPVGT V E I + D Sbjct: 140 RVMRAGRGKHGQGSARNGQRGDDVIVTVPVGTIVTEVSRIDPVAD 184 >gi|254568336|ref|XP_002491278.1| hypothetical protein [Pichia pastoris GS115] gi|238031075|emb|CAY68998.1| hypothetical protein PAS_chr2-1_0832 [Pichia pastoris GS115] gi|328352204|emb|CCA38603.1| GTPase MTG2, mitochondrial [Pichia pastoris CBS 7435] Length = 535 Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 54/139 (38%), Positives = 88/139 (63%), Gaps = 2/139 (1%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF + + P ++ G G E+ +LKL+AD+G++GLPNAGKST L +++ A+P++ Sbjct: 333 NMHFLTDDIRNPRFSKVGRPGLEQTFVFELKLLADLGLVGLPNAGKSTLLRAISNARPRV 392 Query: 187 ADYPFTTLYPNLGIVKEGY--KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + FTTL P +G + G + F +ADIPGIIK A + G+G FL+H ER+ L+ ++ Sbjct: 393 GHWEFTTLQPTIGTIPMGIDKEPFTVADIPGIIKGASENRGMGISFLRHVERSGGLVFVI 452 Query: 245 SALEENVQAAYQCILDELS 263 S + +N + +L E++ Sbjct: 453 SLVGQNPINDLEILLAEMT 471 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 2/94 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + +RSG GG G +SF RE G P+GG GG GGD+++Q S++++L + Sbjct: 124 FSDIRVLKLRSGRGGNGAVSFLREANRSKGPPNGGDGGTGGDIYVQTASHMHSL--HKLS 181 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 + A+ G G K G +G DVV+ VPVGT + Sbjct: 182 SRYLAEDGSSGEKNQLDGKRGRDVVIEVPVGTHI 215 >gi|256045443|ref|ZP_05448335.1| GTPase ObgE [Brucella melitensis bv. 1 str. Rev.1] Length = 134 Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 61/126 (48%), Positives = 76/126 (60%) Query: 208 FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS 267 F++ADIPG+I+ A +G G+GDRFL H ERT VLLH+VSA EE+V AYQ I EL AY Sbjct: 1 FVIADIPGLIEGASEGVGLGDRFLGHVERTRVLLHLVSAQEEDVAKAYQVIRGELEAYEH 60 Query: 268 ELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 L K EIV LSQ+DT+D +T K L CG P S+++ G+ L L I Sbjct: 61 GLADKPEIVALSQVDTLDPETRKAKVKALKKACGCEPLLLSAVSHEGLNDTLRQLARIID 120 Query: 328 SIRGEN 333 R E Sbjct: 121 LSRAEE 126 >gi|146414786|ref|XP_001483363.1| hypothetical protein PGUG_04092 [Meyerozyma guilliermondii ATCC 6260] gi|146391836|gb|EDK39994.1| hypothetical protein PGUG_04092 [Meyerozyma guilliermondii ATCC 6260] Length = 514 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 107/198 (54%), Gaps = 4/198 (2%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF + + P ++ G G + L+LK+IAD+G++GLPNAGKST L +++RA+P++ Sbjct: 313 NMHFLTKDIRNPRFSKRGREGLRQFFILELKIIADLGLVGLPNAGKSTLLRAISRARPRV 372 Query: 187 ADYPFTTLYPNLGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + FTTL P +G + F +ADIPGIIK A G+G FL+H ER++ L+ +V Sbjct: 373 GHWEFTTLQPTVGTIFTTIDRDPFTVADIPGIIKGASHDKGMGLDFLRHIERSNGLVFVV 432 Query: 245 SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP 304 S ++ + ++ E+ E KK+ +V ++ D + R+ + G Sbjct: 433 SLESKSPNEDLEILVQEVGKKRME-DKKVLVVA-TKADVNSTPDRYRQFQKYVESNGWKI 490 Query: 305 FEFSSITGHGIPQILECL 322 S+ G + + +E + Sbjct: 491 LPVSAQNGENVERCIEMM 508 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 2/94 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V SG GG G +SF R+ G DGG GGRGGDV++ L +L + + Sbjct: 107 FVDLKLVQAVSGRGGNGSVSFFRDAHRPVGPADGGDGGRGGDVYVHVVEGLTSL--HKVK 164 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 + + AQ+G G R G KG+DVV+ VP GT + Sbjct: 165 KTYVAQNGGAGTGRQLDGKKGDDVVIEVPAGTTI 198 >gi|332265103|ref|XP_003281565.1| PREDICTED: GTP-binding protein 5-like isoform 2 [Nomascus leucogenys] Length = 178 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 94/165 (56%), Gaps = 6/165 (3%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQ 222 ++G PNAGKS+ L +++ A+P +A YPFTTL P++GIV EG+++ +ADIPGII+ AHQ Sbjct: 1 MVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHQQIAVADIPGIIRGAHQ 60 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 G+G FL+H ER LL +V + + EL Y L ++ + ++ID Sbjct: 61 NRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSERPHAIIANKID 120 Query: 283 TVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 ++ ++L GQ S++TG + Q+L LH K+ Sbjct: 121 LPEAQA---NLSQLQDHLGQEVIVLSALTGENLEQLL--LHLKVL 160 >gi|168040550|ref|XP_001772757.1| predicted protein [Physcomitrella patens subsp. patens] gi|162675982|gb|EDQ62471.1| predicted protein [Physcomitrella patens subsp. patens] Length = 406 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/147 (40%), Positives = 91/147 (61%), Gaps = 8/147 (5%) Query: 144 GILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK- 202 G G E I+ L+LK IAD+G++G PNAGKST L +++RAKP + Y FTTL PN+G ++ Sbjct: 208 GSPGSEAILVLELKTIADVGLVGAPNAGKSTLLGAISRAKPTVGHYAFTTLRPNIGKLEY 267 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV---SALEEN----VQAAY 255 E + +ADIPG+IK AH+ G+G FL+H ERT L +++ + +E+N + Sbjct: 268 EDHFSLTVADIPGLIKGAHENRGLGHAFLRHIERTKALAYVLDLSADIEDNKGPLPWDQF 327 Query: 256 QCILDELSAYNSELRKKIEIVGLSQID 282 + + EL Y L + ++ ++ID Sbjct: 328 EELKFELDKYKDGLSARPALIVATKID 354 >gi|119186571|ref|XP_001243892.1| hypothetical protein CIMG_03333 [Coccidioides immitis RS] Length = 555 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 17/187 (9%) Query: 106 CDLDQEGQR-IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 DL Q + ++L G GG GN HF S N P +A G G + L+LKL+AD+G+ Sbjct: 246 LDLSQHMDKPMLLVAGAVGGRGNPHFVSKENPRPAFATKGEGGMAVELELELKLLADVGL 305 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------KEGYKE---F 208 +GLPNAGKST L S+T ++ +I ++ FTTL PN+G V K G K+ F Sbjct: 306 VGLPNAGKSTLLRSITNSRARIGNWAFTTLSPNIGTVVLDDLTGRPLTHSKPGGKQRSRF 365 Query: 209 ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 +ADIPG+++NAH G+G FL+H ER ++ +V + A + + EL Y Sbjct: 366 TIADIPGLVENAHLDKGLGLGFLRHIERAGIIAFVVDLSAGDAVKALKGLWRELDEYQLL 425 Query: 269 LRKKIEI 275 K++ + Sbjct: 426 REKQLNM 432 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 53/96 (55%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + +G GG G +SF REK+I G +GG GG GG V+IQA +L + Sbjct: 76 FQDRCTLRLHTGSGGNGCVSFLREKYISEGPANGGDGGTGGSVYIQAIDGHTSLHKLARR 135 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 +A G G + + G +G DV+L VPVGT V E Sbjct: 136 GVIRAGRGRNGKGKLQGGQRGNDVLLQVPVGTVVRE 171 >gi|303317676|ref|XP_003068840.1| GTP1/OBG family protein [Coccidioides posadasii C735 delta SOWgp] gi|240108521|gb|EER26695.1| GTP1/OBG family protein [Coccidioides posadasii C735 delta SOWgp] Length = 558 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 17/187 (9%) Query: 106 CDLDQEGQR-IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 DL Q + ++L G GG GN HF S N P +A G G + L+LKL+AD+G+ Sbjct: 249 LDLSQHMDKPMLLVAGAVGGRGNPHFVSKENPRPAFATKGEGGMAVELELELKLLADVGL 308 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------KEGYKE---F 208 +GLPNAGKST L S+T ++ +I ++ FTTL PN+G V K G K+ F Sbjct: 309 VGLPNAGKSTLLRSITNSRARIGNWAFTTLSPNIGTVVLDDLTGRPLTHSKPGGKQRSRF 368 Query: 209 ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 +ADIPG+++NAH G+G FL+H ER ++ +V + A + + EL Y Sbjct: 369 TIADIPGLVENAHLDKGLGLGFLRHIERAGIIAFVVDLSAGDAVKALKGLWRELDEYQLL 428 Query: 269 LRKKIEI 275 K++ + Sbjct: 429 REKQLNM 435 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 53/96 (55%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + +G GG G +SF REK+I G +GG GG GG ++IQA +L + Sbjct: 79 FQDRCTLRLHTGSGGNGCVSFLREKYISEGPANGGDGGTGGSIYIQAIDGHTSLHKLARR 138 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 +A G G + + G +G DV+L VPVGT V E Sbjct: 139 GVIRAGRGRNGKGKLQGGQRGNDVLLQVPVGTVVRE 174 >gi|320038845|gb|EFW20780.1| GTP-binding protein Obg [Coccidioides posadasii str. Silveira] Length = 555 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 17/187 (9%) Query: 106 CDLDQEGQR-IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 DL Q + ++L G GG GN HF S N P +A G G + L+LKL+AD+G+ Sbjct: 246 LDLSQHMDKPMLLVAGAVGGRGNPHFVSKENPRPAFATKGEGGMAVELELELKLLADVGL 305 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------KEGYKE---F 208 +GLPNAGKST L S+T ++ +I ++ FTTL PN+G V K G K+ F Sbjct: 306 VGLPNAGKSTLLRSITNSRARIGNWAFTTLSPNIGTVVLDDLTGRPLTHSKPGGKQRSRF 365 Query: 209 ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 +ADIPG+++NAH G+G FL+H ER ++ +V + A + + EL Y Sbjct: 366 TIADIPGLVENAHLDKGLGLGFLRHIERAGIIAFVVDLSAGDAVKALKGLWRELDEYQLL 425 Query: 269 LRKKIEI 275 K++ + Sbjct: 426 REKQLNM 432 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 53/96 (55%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + +G GG G +SF REK+I G +GG GG GG ++IQA +L + Sbjct: 76 FQDRCTLRLHTGSGGNGCVSFLREKYISEGPANGGDGGTGGSIYIQAIDGHTSLHKLARR 135 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 +A G G + + G +G DV+L VPVGT V E Sbjct: 136 GVIRAGRGRNGKGKLQGGQRGNDVLLQVPVGTVVRE 171 >gi|332858899|ref|XP_003317088.1| PREDICTED: GTP-binding protein 5 [Pan troglodytes] Length = 178 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 92/165 (55%), Gaps = 6/165 (3%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQ 222 ++G PNAGKS+ L +++ A+P +A YPFTTL P++GIV EG+ + +ADIPGII+ AHQ Sbjct: 1 MVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQ 60 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 G+G FL+H ER LL +V + + EL Y L + + ++ID Sbjct: 61 NRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKID 120 Query: 283 TVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 ++ ++L GQ S++TG + Q+L LH K+ Sbjct: 121 LPEAQA---NLSQLQDHLGQEVIVLSALTGENLEQLL--LHLKVL 160 >gi|119595792|gb|EAW75386.1| GTP binding protein 5 (putative), isoform CRA_a [Homo sapiens] gi|194386774|dbj|BAG61197.1| unnamed protein product [Homo sapiens] gi|221045442|dbj|BAH14398.1| unnamed protein product [Homo sapiens] gi|221046038|dbj|BAH14696.1| unnamed protein product [Homo sapiens] Length = 178 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 92/165 (55%), Gaps = 6/165 (3%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQ 222 ++G PNAGKS+ L +++ A+P +A YPFTTL P++GIV EG+ + +ADIPGII+ AHQ Sbjct: 1 MVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQ 60 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 G+G FL+H ER LL +V + + EL Y L + + ++ID Sbjct: 61 NRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKID 120 Query: 283 TVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 ++ ++L GQ S++TG + Q+L LH K+ Sbjct: 121 LPEAQA---NLSQLRDHLGQEVIVLSALTGENLEQLL--LHLKVL 160 >gi|68074697|ref|XP_679265.1| GTP-binding protein [Plasmodium berghei strain ANKA] gi|56499972|emb|CAI04426.1| GTP-binding protein, putative [Plasmodium berghei] Length = 516 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 90/344 (26%), Positives = 163/344 (47%), Gaps = 68/344 (19%) Query: 3 FLDEAKVYIRSGDGGAG---GISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDF 59 F D + ++ G+GG G +F ++K ++ GG GG+GGD+++ ++ ++ Sbjct: 25 FHDRCIINVKGGNGGDGICCFTTFSQKKNKKYAS--GGRGGKGGDIYLIGDKKIDNFLNL 82 Query: 60 RYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAP 119 + + + A +G+KG N+ G G+D + +P+ T ++E++ I + + Q++++A Sbjct: 83 KLKSFYYAGNGKKGCNNNQQGENGKDEYINIPINTIIYEDN--KFINFIHSDYQKVLVAK 140 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG GN +++ + + PY G +EK I LK D+GIIG PN GKST L + Sbjct: 141 GGKGGKGNYSYRTKSLKIPYVCQFGEKTKEKQIILKKIFFTDLGIIGYPNVGKSTLLNKI 200 Query: 180 TRAKPKIADYPFTTLYPNLGIVK-------------------EGYKEFILADI------- 213 T A KIA+Y +T+L+PN GI K E YK+ I ++I Sbjct: 201 TNANVKIANYSYTSLFPNFGIYKCKNEVKHMGSHEPEKAIKVEEYKQEIESEIKEEREKN 260 Query: 214 ----------------------------------PGIIKNAHQG-AGIGDRFLKHTERTH 238 PGII+ + + + ++L+H + + Sbjct: 261 ELEIGEENKLKNEGKNTEICAERINTRNYTVIDFPGIIEGLDKKLSNVSYKYLEHLKYSK 320 Query: 239 VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 +L+++ + Y+ I + L Y+ KK E++ L++ID Sbjct: 321 ILIYMFDINNNCIVETYKNIKNVLVQYDKIFEKKKEVIILNKID 364 >gi|156848400|ref|XP_001647082.1| hypothetical protein Kpol_1050p84 [Vanderwaltozyma polyspora DSM 70294] gi|156117765|gb|EDO19224.1| hypothetical protein Kpol_1050p84 [Vanderwaltozyma polyspora DSM 70294] Length = 550 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 58/163 (35%), Positives = 95/163 (58%), Gaps = 3/163 (1%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF + + P +A G G + +LK IAD+G++GLPNAGKST L ++ +KP+I Sbjct: 339 NMHFLTQVIRNPRFAKSGRDGLSEYFLFELKTIADLGLVGLPNAGKSTILNRISNSKPRI 398 Query: 187 ADYPFTTLYPNLGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + FTTL+P +G + G + F +ADIPGII+ A Q G+G F++H ER+ + ++ Sbjct: 399 GHWKFTTLFPTVGTISLGIDKPSFTVADIPGIIEGASQDKGMGLEFIRHIERSTGWVMVI 458 Query: 245 SALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 S E+ +++EL +++KK +V ++ D +D Sbjct: 459 SLEEDEPLNQLHTLINELGG-PEKIKKKNILVVCNKADIAAND 500 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 2/94 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D + SG GG G +SF R+ G PDGG GG GG +++QA +N+L + + Sbjct: 117 FVDTRIIKCSSGQGGNGVVSFYRDAGRAIGPPDGGDGGDGGSIYVQAVEGMNSLA--KLK 174 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 + A G G GA+G D+++ VPVGT + Sbjct: 175 SSYLASEGSDGAGDQLHGARGRDILIKVPVGTVI 208 >gi|58261374|ref|XP_568097.1| essential GTPase [Cryptococcus neoformans var. neoformans JEC21] gi|58261376|ref|XP_568098.1| essential GTPase [Cryptococcus neoformans var. neoformans JEC21] gi|57230179|gb|AAW46580.1| essential conserved GTPase, putative [Cryptococcus neoformans var. neoformans JEC21] gi|57230180|gb|AAW46581.1| essential conserved GTPase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 525 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 91/336 (27%), Positives = 142/336 (42%), Gaps = 76/336 (22%) Query: 60 RYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQE-------- 111 R+Q+ F A KG A GED++ E I+ DQ Sbjct: 177 RWQRWFIAHPSTKGEVSEEEYADGEDLLRR--------ERRWIAHTPSFDQTPPFHLDIS 228 Query: 112 ---GQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLP 168 + +++A GG+GG GN F S P A+ G L +LKL+AD+G++G P Sbjct: 229 EPLDEPVLIASGGSGGLGNPFFPS-----PRLASRGTLPPTHTFEFELKLLADVGLVGFP 283 Query: 169 NAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK---------------EGYKE------ 207 NAGKST L ++T + ++A Y FTTL P +G+V+ E + E Sbjct: 284 NAGKSTILRALTGRRAEVAGYQFTTLNPQIGVVRVYEDGSWGVGKEEVVETWIEREREDF 343 Query: 208 -------------------------FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 F L+D PG++ A Q G+G FL+ ER+ VL + Sbjct: 344 SRQTGGPFPASRIKNGREDKMERLRFTLSDNPGLLPMASQNVGLGHSFLRSIERSPVLAY 403 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT---- 298 ++ + + Q + EL AY L ++ +V L++ D V + ++ E+A Sbjct: 404 VLDLTKPSPVQDLQVLKTELEAYKPGLSERAGVVVLNKGDAVPEEEGKKRVEEVAAFVSE 463 Query: 299 -QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 + GQV S G G+ ++ L D + R E Sbjct: 464 HKSGQV-IVLSGRYGLGMETLVALLADNVEKARIER 498 >gi|302795332|ref|XP_002979429.1| hypothetical protein SELMODRAFT_419125 [Selaginella moellendorffii] gi|300152677|gb|EFJ19318.1| hypothetical protein SELMODRAFT_419125 [Selaginella moellendorffii] Length = 302 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 48/92 (52%), Positives = 69/92 (75%), Gaps = 4/92 (4%) Query: 154 LKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILAD 212 L+LKL+AD+GIIG+PNAGKST L+++ A+P IA YPFTTL PNL +V + ++AD Sbjct: 65 LELKLVADVGIIGVPNAGKSTLLSAIRAARPSIAAYPFTTLLPNLSVVSLDFDATMVIAD 124 Query: 213 IPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 +PG+++ AH G G+G FL+HT VL+H++ Sbjct: 125 LPGLLEGAHAGCGLGHEFLRHTR---VLIHVI 153 >gi|308809237|ref|XP_003081928.1| Predicted GTP-binding protein (ODN superfamily) (ISS) [Ostreococcus tauri] gi|116060395|emb|CAL55731.1| Predicted GTP-binding protein (ODN superfamily) (ISS) [Ostreococcus tauri] Length = 396 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 84/287 (29%), Positives = 127/287 (44%), Gaps = 60/287 (20%) Query: 69 HGEKGMKRNRSGAKGEDVVLTVPVGTQV----FEEDG----------------------- 101 G+ G + G++GED + TVP+GT V FE+DG Sbjct: 78 RGKPGGSQGMIGSRGEDAIATVPLGTVVWRERFEDDGEHPDVVDTSNWGTSTPVAMNDDD 137 Query: 102 ---------------------------ISLICDLDQEGQRIILAPGGNGGFGNAHFKSST 134 ++ DL EGQ +LA G G + + Sbjct: 138 GDGDGGASTSTRREGGWTRPRGLGRGAWEIVADLTAEGQTCVLA--AGGRGGKGNRRMPV 195 Query: 135 NQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL 194 + PG G+E L+LK +AD+G+IGLPNAGKST L +++ A P++ Y FTT+ Sbjct: 196 GKEAGTREPGEPGEEGSYVLELKSVADVGLIGLPNAGKSTLLRALSNATPRVGSYAFTTM 255 Query: 195 YPNLGIVKEGYKEFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS-ALEENVQ 252 P LG ++ I +ADIPG+IK AH+ G+G FL+H ER +IV + ++V+ Sbjct: 256 QPQLGAIERSNGTSITVADIPGLIKGAHENRGLGHNFLRHIERCEAFAYIVDVSCGDSVK 315 Query: 253 A--AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 A + EL Y L + V ++ D ++ + E A Sbjct: 316 PWDALDVLRKELEEYLPGLSSRPAFVVATKTDLPNTSRALKTLRERA 362 >gi|134115587|ref|XP_773507.1| hypothetical protein CNBI1210 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256133|gb|EAL18860.1| hypothetical protein CNBI1210 [Cryptococcus neoformans var. neoformans B-3501A] Length = 525 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 93/337 (27%), Positives = 142/337 (42%), Gaps = 78/337 (23%) Query: 60 RYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQE-------- 111 R+Q+ F A KG A GED++ E I+ DQ Sbjct: 177 RWQRWFIAHPSTKGEVSEEEYADGEDLLRR--------ERRWIAHTPSFDQTPPFHLDIS 228 Query: 112 ---GQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLP 168 + +++A GG+GG GN F S P A+ G L +LKL+AD+G++G P Sbjct: 229 EPLDEPVLIASGGSGGLGNPFFPS-----PRLASRGTLPPTHTFEFELKLLADVGLVGFP 283 Query: 169 NAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK---------------EGYKE------ 207 NAGKST L ++T + ++A Y FTTL P +G+V+ E + E Sbjct: 284 NAGKSTILRALTGRRAEVAGYQFTTLNPQIGVVRVYEDGSWGVGKEEVVETWIEREREDF 343 Query: 208 -------------------------FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 F L+D PG++ A Q G+G FL+ ER+ VL + Sbjct: 344 SRQTGGPFPASRIKNGREDKMERLRFTLSDNPGLLPMASQNVGLGHSFLRSIERSPVLAY 403 Query: 243 IVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT---- 298 ++ + + Q + EL AY L ++ +V L++ D V + RK+ E T Sbjct: 404 VLDLTKPSPVQDLQVLKTELEAYKPGLSERAGVVVLNKGDAVPEEE-GRKRVEEVTAFVS 462 Query: 299 --QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 + GQV S G G+ ++ L D + R E Sbjct: 463 EHKSGQV-IVLSGRYGLGMETLVALLADNVEKARIER 498 >gi|241958756|ref|XP_002422097.1| mitochondrial GTPase, precursor, putative [Candida dubliniensis CD36] gi|223645442|emb|CAX40098.1| mitochondrial GTPase, precursor, putative [Candida dubliniensis CD36] Length = 553 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 55/138 (39%), Positives = 84/138 (60%), Gaps = 2/138 (1%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF + + P + G G L+LKLIAD+G++GLPNAGKS+ L ++++A+P++ Sbjct: 341 NMHFLTKEIKGPRFCKMGRPGITANFLLELKLIADLGLVGLPNAGKSSLLRAISKARPRV 400 Query: 187 ADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + FTTL P +G + + F +ADIPGIIK A Q G+G FL+H ER+ L+ +V Sbjct: 401 GHWEFTTLQPTVGTIFTRIDKDPFTVADIPGIIKGASQNKGMGLDFLRHIERSGGLVFVV 460 Query: 245 SALEENVQAAYQCILDEL 262 S N + +L+E+ Sbjct: 461 SLESANPVNDLKILLEEV 478 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 3/96 (3%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS-NLNTLIDFR 60 KF+D + + SG+GG G +SF ++ F G PDGG GG GG +++ N+ +L Sbjct: 132 KFIDLKLIKLTSGNGGNGCVSFFKDNFKPMGPPDGGDGGNGGSIYLNVVDKNITSLHGL- 190 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 Q+ + A+ G+ G G G+D+++ +P+GT V Sbjct: 191 -QKRYVAKGGQPGKGSQLDGKSGDDIIIDIPLGTIV 225 >gi|50427923|ref|XP_462574.1| DEHA2G23804p [Debaryomyces hansenii CBS767] gi|49658244|emb|CAG91087.1| DEHA2G23804p [Debaryomyces hansenii] Length = 535 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/157 (38%), Positives = 98/157 (62%), Gaps = 3/157 (1%) Query: 92 VGTQVFEEDGISLICDLDQEGQR-IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEK 150 + +++E++ + D D+ + ++L GG GG GN HF + + P + G G K Sbjct: 298 IKEELYEDNFPMMGIDFDKPTSKPVLLIKGGKGGMGNMHFLTKDIRNPKFCKMGRAGLTK 357 Query: 151 IIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE--F 208 L+LKLIAD+G++GLPNAGKST L ++++A+P++ + FTTL P +G + + F Sbjct: 358 FFLLELKLIADLGLVGLPNAGKSTLLRAISKARPRVGHWEFTTLQPTIGTIFTSIDKDPF 417 Query: 209 ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS 245 +ADIPGIIK A + G+G FL+H ER+ L+ ++S Sbjct: 418 TVADIPGIIKGASENKGMGLDFLRHIERSGGLVFVIS 454 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 2/94 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D + ++SG GG G SF R+ F G PDGG GG GG++++ A +N+ +L + + Sbjct: 126 FIDLKLIRVKSGKGGNGSASFFRDAFRPMGPPDGGDGGYGGNIYVNAVNNITSL--HKVK 183 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 + ++A+ G +GM + G GEDV++ VPVGT V Sbjct: 184 RSYEARDGTQGMGKQLDGKNGEDVIIEVPVGTTV 217 >gi|238880001|gb|EEQ43639.1| conserved hypothetical protein [Candida albicans WO-1] Length = 548 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/138 (39%), Positives = 84/138 (60%), Gaps = 2/138 (1%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF + + P + G G L+LKLIAD+G++GLPNAGKS+ L ++++A+P++ Sbjct: 341 NMHFLTKEIKGPRFCKMGRPGITANFLLELKLIADLGLVGLPNAGKSSLLRAISKARPRV 400 Query: 187 ADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + FTTL P +G + + F +ADIPGIIK A Q G+G FL+H ER+ L+ +V Sbjct: 401 GHWEFTTLQPTVGTIFTRIDKDPFTVADIPGIIKGASQNKGMGLDFLRHIERSGGLVFVV 460 Query: 245 SALEENVQAAYQCILDEL 262 S N + +L+E+ Sbjct: 461 SLESANPVDDLKILLEEV 478 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 3/96 (3%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS-NLNTLIDFR 60 KF+D + + SG+GG G +SF ++ F G PDGG GG GG +++ N+ +L Sbjct: 132 KFIDLKLIKLTSGNGGNGCVSFFKDNFKPMGPPDGGDGGNGGSIYLNVVDKNITSLHGL- 190 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 Q+ + A+ G+ G G G+D+++ +P+GT V Sbjct: 191 -QKRYVAKGGQPGKGSQLDGKSGDDIIIDIPLGTIV 225 >gi|45190905|ref|NP_985159.1| AER302Cp [Ashbya gossypii ATCC 10895] gi|44983947|gb|AAS52983.1| AER302Cp [Ashbya gossypii ATCC 10895] Length = 539 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/152 (36%), Positives = 85/152 (55%), Gaps = 2/152 (1%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF + + P +A G G E+ +LK + D+G++GLPNAGKST L ++ A+P++ Sbjct: 332 NMHFLTKLIRNPRFAKRGRNGLEQFFMFELKTVGDLGLVGLPNAGKSTILNRISAARPRV 391 Query: 187 ADYPFTTLYPNLGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + FTTL P +G V G + F + DIPGIIK A Q G+G F++H ER+ + ++ Sbjct: 392 GHWEFTTLAPTVGTVSLGIDKPTFTVVDIPGIIKGAAQDKGMGLEFIRHIERSKGWVFVI 451 Query: 245 SALEENVQAAYQCILDELSAYNSELRKKIEIV 276 S + A ++ EL KK+ +V Sbjct: 452 SLEKNQPIADLHTLIGELGGLEKVSSKKVLVV 483 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 2/94 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V +SG GG G +SF R+ G PDGG GG GG V++QA L TL + + Sbjct: 111 FVDVRIVRCKSGSGGNGAVSFFRDAGRAIGPPDGGDGGDGGGVYVQAVPGLTTLA--KLK 168 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 ++A G+ G GA+G DV++ VPVGT V Sbjct: 169 STYEAHDGKNGGGVQLDGARGRDVLIQVPVGTVV 202 >gi|68487952|ref|XP_712193.1| hypothetical protein CaO19.13974 [Candida albicans SC5314] gi|68488949|ref|XP_711719.1| hypothetical protein CaO19.6653 [Candida albicans SC5314] gi|46433040|gb|EAK92497.1| hypothetical protein CaO19.6653 [Candida albicans SC5314] gi|46433564|gb|EAK93000.1| hypothetical protein CaO19.13974 [Candida albicans SC5314] Length = 548 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/138 (39%), Positives = 84/138 (60%), Gaps = 2/138 (1%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF + + P + G G L+LKLIAD+G++GLPNAGKS+ L ++++A+P++ Sbjct: 341 NMHFLTKEIKGPRFCKMGRPGITANFLLELKLIADLGLVGLPNAGKSSLLRAISKARPRV 400 Query: 187 ADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + FTTL P +G + + F +ADIPGIIK A Q G+G FL+H ER+ L+ +V Sbjct: 401 GHWEFTTLQPTVGTIFTRIDKDPFTVADIPGIIKGASQNKGMGLDFLRHIERSGGLVFVV 460 Query: 245 SALEENVQAAYQCILDEL 262 S N + +L+E+ Sbjct: 461 SLESANPVDDLKILLEEV 478 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 3/96 (3%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATS-NLNTLIDFR 60 KF+D + + SG+GG G +SF ++ F G PDGG GG GG +++ N+ +L Sbjct: 132 KFIDLKLIKLTSGNGGNGCVSFFKDNFKPMGPPDGGDGGNGGSIYLNVVDKNITSLHGL- 190 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 Q+ + A+ G+ G G G+D+++ +P+GT V Sbjct: 191 -QKRYVAKGGQPGKGSQLDGKSGDDIIIDIPLGTIV 225 >gi|111955063|ref|NP_001036182.1| GTP-binding protein 10 isoform 1 [Homo sapiens] gi|119597286|gb|EAW76880.1| hypothetical protein, isoform CRA_c [Homo sapiens] gi|194377298|dbj|BAG57597.1| unnamed protein product [Homo sapiens] Length = 308 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 79/248 (31%), Positives = 121/248 (48%), Gaps = 41/248 (16%) Query: 116 ILAPGGNGGFGNAHFKSSTNQAP----YYANPGILGQEKIIWLKLKLIADIGIIG-LPNA 170 + GG+GG G + N L Q K + + + +A +G PNA Sbjct: 21 LFTRGGSGGMGYPRLGGEGGKGGDVWVVAQNRMTLKQLKDRYPRKRFVAGVGANSKFPNA 80 Query: 171 GKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDR 229 GKS+ L+ V+ AKP IADY FTTL P LG I+ +K+ +AD+PG+I+ AH G+G + Sbjct: 81 GKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHK 140 Query: 230 FLKHTERTHVLLHIVS----ALEENVQ--AAYQCIL---DELSAYNSELRKKIEIVGLSQ 280 FLKH ERT LL +V L + Q A++ I+ EL Y EL+ K ++ +++ Sbjct: 141 FLKHIERTRQLLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNK 200 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEF----------------------SSITGHGIPQI 318 +D D+ K +EL +Q Q P +F S++TG GI ++ Sbjct: 201 MDLPDAQD---KFHELMSQL-QNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEEL 256 Query: 319 LECLHDKI 326 C+ + Sbjct: 257 KNCIRKSL 264 >gi|218461168|ref|ZP_03501259.1| GTPase ObgE [Rhizobium etli Kim 5] Length = 112 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 51/92 (55%), Positives = 63/92 (68%) Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQI 281 +G GIGDRFL H ERT VLLH+VSA EE V AY+ + EL AY ++L K EIV LSQI Sbjct: 2 KGVGIGDRFLGHVERTRVLLHLVSAQEEKVGKAYKTVKHELEAYGNDLTDKPEIVALSQI 61 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGH 313 D +D L +K ELA CG+ PF S++TG+ Sbjct: 62 DVLDEAELKKKTKELAKACGKTPFLISAVTGN 93 >gi|153820538|ref|ZP_01973205.1| GTP-binding protein, GTP1/Obg family [Vibrio cholerae NCTC 8457] gi|126508918|gb|EAZ71512.1| GTP-binding protein, GTP1/Obg family [Vibrio cholerae NCTC 8457] Length = 221 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/119 (45%), Positives = 80/119 (67%), Gaps = 4/119 (3%) Query: 173 STFLASVTRAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFL 231 STF+ +V+ AKPK+ADYPFTTL P+LG+V K F++ADIPG+I+ A +GAG+G RFL Sbjct: 4 STFIRAVSAAKPKVADYPFTTLVPSLGVVSVLPEKSFVVADIPGLIEGAAEGAGLGIRFL 63 Query: 232 KHTERTHVLLHIVSAL-EENVQAAYQC--ILDELSAYNSELRKKIEIVGLSQIDTVDSD 287 KH ER VLLH++ + + A+ I+DEL Y+ +L KK + +++D + + Sbjct: 64 KHLERCRVLLHMIDVMPADQSDPAHNALTIIDELEQYSEKLAKKPRWLVFNKVDLMSEE 122 >gi|25990400|gb|AAN76513.1|AF351613_1 UG0751c10 [Homo sapiens] Length = 308 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 79/248 (31%), Positives = 121/248 (48%), Gaps = 41/248 (16%) Query: 116 ILAPGGNGGFGNAHFKSSTNQAP----YYANPGILGQEKIIWLKLKLIADIGIIG-LPNA 170 + GG+GG G + N L Q K + + + +A +G PNA Sbjct: 21 LFTRGGSGGMGYPRLGGEGGKGGDVWVVAQNRMTLKQLKDRYPRKRFVAGVGANSKFPNA 80 Query: 171 GKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDR 229 GKS+ L+ V+ AKP IADY FTTL P LG I+ +K+ +AD+PG+I+ AH G+G + Sbjct: 81 GKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHK 140 Query: 230 FLKHTERTHVLLHIVS----ALEENVQ--AAYQCIL---DELSAYNSELRKKIEIVGLSQ 280 FLKH ERT LL +V L + Q A++ I+ EL Y EL+ K ++ +++ Sbjct: 141 FLKHIERTRQLLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNK 200 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEF----------------------SSITGHGIPQI 318 +D D+ K +EL +Q Q P +F S++TG GI ++ Sbjct: 201 MDLPDAQD---KFHELMSQL-QNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEEL 256 Query: 319 LECLHDKI 326 C+ + Sbjct: 257 KNCIRKSL 264 >gi|332206709|ref|XP_003252438.1| PREDICTED: GTP-binding protein 10 isoform 2 [Nomascus leucogenys] Length = 308 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 79/248 (31%), Positives = 121/248 (48%), Gaps = 41/248 (16%) Query: 116 ILAPGGNGGFGNAHFKSSTNQAP----YYANPGILGQEKIIWLKLKLIADIGIIG-LPNA 170 + GG+GG G + N L Q K + + + +A +G PNA Sbjct: 21 LFTRGGSGGMGYPRLGGEGGKGGDVWVVAQNRMTLKQLKDKYPQKRFVAGVGANSKFPNA 80 Query: 171 GKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDR 229 GKS+ L+ V+ AKP IADY FTTL P LG I+ +K+ +AD+PG+I+ AH G+G + Sbjct: 81 GKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHK 140 Query: 230 FLKHTERTHVLLHIVS----ALEENVQ--AAYQCIL---DELSAYNSELRKKIEIVGLSQ 280 FLKH ERT LL +V L + Q A++ I+ EL Y EL+ K ++ +++ Sbjct: 141 FLKHIERTRQLLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNK 200 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEF----------------------SSITGHGIPQI 318 +D D+ K +EL +Q Q P +F S++TG GI ++ Sbjct: 201 MDLPDAQD---KFHELMSQL-QNPKDFLHLFGKNMIPERTVEFQHIIPISAVTGEGIEEL 256 Query: 319 LECLHDKI 326 C+ + Sbjct: 257 KNCIRKSL 264 >gi|66817210|ref|XP_642483.1| GTP1/OBG family protein [Dictyostelium discoideum AX4] gi|60470595|gb|EAL68574.1| GTP1/OBG family protein [Dictyostelium discoideum AX4] Length = 628 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 49/97 (50%), Positives = 70/97 (72%) Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 I DL++ GQ +++A GG GG GN +F S +N++P YA PG G+ K I L+LK+IAD G+ Sbjct: 272 IIDLNEFGQEVVVASGGLGGKGNYNFASGSNRSPEYAQPGTKGEIKRIELELKIIADFGL 331 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV 201 +G PNAGKST L+ ++ A P I +Y FTTL P +G++ Sbjct: 332 VGYPNAGKSTLLSVISNAIPNIQNYAFTTLNPYVGVI 368 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/98 (41%), Positives = 67/98 (68%), Gaps = 2/98 (2%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 + F+D+ +V +++GDGG G ISF R K+I G PDGG+GG G ++ ++A + N L + Sbjct: 90 LSFIDKIRVGVKAGDGGGGAISFFRAKYIPEGPPDGGNGGSGANIIVRADFDNNNLSHLK 149 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 +++K ++G+KGM +SG G+D+VL VP+GT + E Sbjct: 150 --KNYKGENGQKGMGARKSGKDGDDIVLRVPIGTVIKE 185 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 16/46 (34%), Positives = 29/46 (63%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY 255 +AD+PGI++ AH G+G FL+H ERT +++++ + A + Sbjct: 454 IADLPGILEGAHLNLGLGLDFLRHIERTKAIVYVLDMSNNGLPAIW 499 >gi|221060472|ref|XP_002260881.1| GTP binding protein [Plasmodium knowlesi strain H] gi|193810955|emb|CAQ42853.1| GTP binding protein, putative [Plasmodium knowlesi strain H] Length = 575 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 117/204 (57%), Gaps = 6/204 (2%) Query: 2 KFLDEAKVYIRSGDGGAG---GISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLID 58 +F D + ++ G+GG G +F ++K ++ G GG+GG+V++ ++ + Sbjct: 66 QFHDRCVINVKGGNGGDGICCFTTFSQKKNKKYASG--GRGGKGGNVYLIGDKKIDNFLS 123 Query: 59 FRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 + + + A +G KG+ N+SG G+D + +PV T +++E+ + + GQ++++A Sbjct: 124 LKLKSFYYAGNGGKGLNNNQSGENGKDECINIPVNTIIYDEEK-KFLNFIHLNGQKVLIA 182 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GN +++ + + P+ G +EK I+LK D GIIG PN GKST L Sbjct: 183 LGGKGGKGNYSYRTKSLKIPFVCQFGEKTKEKKIFLKKIFFTDFGIIGYPNVGKSTLLNR 242 Query: 179 VTRAKPKIADYPFTTLYPNLGIVK 202 +T A KIA+Y +T+ +PNLGI K Sbjct: 243 ITNANVKIANYSYTSKFPNLGIFK 266 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 68/137 (49%), Gaps = 11/137 (8%) Query: 204 GYKEFILADIPGIIKNAHQG-AGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCIL 259 G + + D PGIIKN + + I ++L+H + +L+++ + N+ Y+ I Sbjct: 341 GKNNYTVIDFPGIIKNLDKKESNISYKYLEHLKHCKILIYMFD-INSNIDVLLETYKNIK 399 Query: 260 DELSAYNSELRKKIEIVGLSQIDTV--DSDTLARKKNELATQCG-QVPFEFSSITGHGIP 316 D L ++ + K E+V L++ID + D +++ N L + F S++TG Sbjct: 400 DVLVQFDPIFKGKKEVVLLNKIDIYKEEKDNVSKIINHLRENLKIEKIFCISALTGEN-- 457 Query: 317 QILECLHDKIFSIRGEN 333 +E +++ + +I EN Sbjct: 458 -AVEAINEIVSNINDEN 473 >gi|332866462|ref|XP_003318617.1| PREDICTED: GTP-binding protein 10 isoform 1 [Pan troglodytes] Length = 308 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 79/248 (31%), Positives = 121/248 (48%), Gaps = 41/248 (16%) Query: 116 ILAPGGNGGFGNAHFKSSTNQAP----YYANPGILGQEKIIWLKLKLIADIGIIG-LPNA 170 + GG+GG G + N L Q K + + + +A +G PNA Sbjct: 21 LFTRGGSGGMGYPRLGGEGGKGGDVWVVAQNRMTLKQLKDRYPQKRFVAGVGANSKFPNA 80 Query: 171 GKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDR 229 GKS+ L+ V+ AKP IADY FTTL P LG I+ +K+ +AD+PG+I+ AH G+G + Sbjct: 81 GKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHK 140 Query: 230 FLKHTERTHVLLHIVS----ALEENVQ--AAYQCIL---DELSAYNSELRKKIEIVGLSQ 280 FLKH ERT LL +V L + Q A++ I+ EL Y EL+ K ++ +++ Sbjct: 141 FLKHIERTRQLLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNK 200 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEF----------------------SSITGHGIPQI 318 +D D+ K +EL +Q Q P +F S++TG GI ++ Sbjct: 201 MDLPDAQD---KFHELMSQL-QNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEEL 256 Query: 319 LECLHDKI 326 C+ + Sbjct: 257 KNCIRKSL 264 >gi|70942533|ref|XP_741422.1| GTP-binding protein [Plasmodium chabaudi chabaudi] gi|56519790|emb|CAH78333.1| GTP-binding protein, putative [Plasmodium chabaudi chabaudi] Length = 471 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 100/375 (26%), Positives = 176/375 (46%), Gaps = 62/375 (16%) Query: 14 GDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKG 73 GDG +F ++K ++ GG GG+GGD+++ ++ ++ + + + A +G KG Sbjct: 2 GDGICCFTTFSQKKNKKYAS--GGRGGKGGDIYLIGDKKIDNFLNLKLKAFYYAGNGGKG 59 Query: 74 MKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSS 133 N+ G G+D + +P+ T ++E++ I + + Q++++A GG GG GN +++ Sbjct: 60 CNNNQQGENGKDEYINIPINTIIYEDN--KFINFIHSDYQKVLVAKGGKGGKGNYSYRTK 117 Query: 134 TNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTT 193 + + PY G +EK I LK D+GIIG PN GKST L +T A KIA+Y +T+ Sbjct: 118 SLKIPYVCQFGEKTKEKQIILKKIFFTDLGIIGYPNVGKSTLLNKITNANVKIANYSYTS 177 Query: 194 LYPNLGIVK-------------------EGYK---------------------------- 206 L+PN GI K E YK Sbjct: 178 LFPNFGIYKCKNEAKDMESHEPDEAIKVEEYKHEIESNVSEENEKNELEISEKNTEACEE 237 Query: 207 -----EFILADIPGIIKNAHQG-AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD 260 + + D PGII+ + + + ++L+H + + VL+++ ++ + Y+ I + Sbjct: 238 RVKTRNYTVIDFPGIIEGLDKKLSNVSYKYLEHLKYSKVLIYMFDINDKCIVETYKNIKN 297 Query: 261 ELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELATQC-GQVPFEFSSITGHGIPQI 318 L Y+ KK E+V L++ID D + + N L F S++TG + Sbjct: 298 VLVQYDQIFEKKKEVVILNKIDIYQDKENINTVINYLKENLKNDKIFCISALTG---TNV 354 Query: 319 LECLHDKIFSIRGEN 333 +E + + I +I EN Sbjct: 355 IETIDEIILNINKEN 369 >gi|156102290|ref|XP_001616838.1| GTP-binding protein [Plasmodium vivax SaI-1] gi|148805712|gb|EDL47111.1| GTP-binding protein, putative [Plasmodium vivax] Length = 570 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 118/204 (57%), Gaps = 6/204 (2%) Query: 2 KFLDEAKVYIRSGDGGAG---GISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLID 58 +F D + I+ G+GG G +F ++K ++ GG GG+GG+V++ ++ + Sbjct: 65 QFHDRCVINIKGGNGGDGICCFTTFSQKKNKKYAS--GGRGGKGGNVYLIGDKKIDNFLS 122 Query: 59 FRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 + + + A +G KG+ N+SG G+D + +PV T +++E+ + + GQ++++A Sbjct: 123 LKLKSFYYAGNGGKGLNNNQSGESGKDECINIPVNTIIYDEEK-KFVNFIHLNGQKVLVA 181 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG GN +++ + + P+ G +EK I+LK D GIIG PN GKST L Sbjct: 182 LGGKGGKGNYSYRTKSLKIPFVCQFGEKTKEKKIFLKKIFFTDFGIIGYPNVGKSTLLNR 241 Query: 179 VTRAKPKIADYPFTTLYPNLGIVK 202 +T A KIA+Y +T+ +PNLGI + Sbjct: 242 ITNANVKIANYSYTSKFPNLGIFR 265 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 6/140 (4%) Query: 202 KEGYKEFILADIPGIIKNAHQG-AGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCI 258 K K + + D PGIIKN + + I ++L+H + +L+++ +++ + + Y+ I Sbjct: 334 KNAAKNYTVIDFPGIIKNLDKKVSNISYKYLEHLKHCKILIYMFDINSSCDVLLETYRNI 393 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTV--DSDTLARKKNELATQCG-QVPFEFSSITGHGI 315 D L Y+ + K E+V L++ID D++ N+L + F S++TG Sbjct: 394 KDVLVQYDPIFKGKREVVLLNKIDICKEKKDSVRNVMNQLRENLKVENIFCISALTGENA 453 Query: 316 PQILECLHDKIFSIRGENEF 335 + + + KI +EF Sbjct: 454 VEAINEIVSKINDDSTASEF 473 >gi|124808333|ref|XP_001348287.1| GTP binding protein, putative [Plasmodium falciparum 3D7] gi|23497178|gb|AAN36726.1| GTP binding protein, putative [Plasmodium falciparum 3D7] Length = 627 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 117/203 (57%), Gaps = 6/203 (2%) Query: 3 FLDEAKVYIRSGDGGAG---GISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDF 59 F D + +++G+GG G F ++K ++ GG GG GGD+++ ++ ++ Sbjct: 35 FHDRCVIKVKAGNGGDGICCFTVFSQKKNKKYAS--GGRGGNGGDIYVIGNKKIDNFLNV 92 Query: 60 RYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAP 119 + + + A++G KG+ N+ G G+D + VP+ T ++ E I + Q++++A Sbjct: 93 KLKSFYNAENGGKGLNNNQVGYNGKDEYIYVPINTIIYNEQK-EFINFIYMNNQKVLIAK 151 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG GN +++ + + P+ G +EK I+LK L D+GIIG PN GKST L + Sbjct: 152 GGKGGKGNYSYRTKSLKIPFVCQYGEKTKEKKIYLKKILFTDLGIIGYPNVGKSTLLNKI 211 Query: 180 TRAKPKIADYPFTTLYPNLGIVK 202 T+A KIA+Y +T+ +PN+G+ K Sbjct: 212 TKANVKIANYSYTSKFPNVGMFK 234 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 3/115 (2%) Query: 208 FILADIPGIIKNAHQGAG-IGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN 266 F + D PGIIK+ + I ++L+H + + +L+++ +N+ Y+ I + L Y+ Sbjct: 401 FSVIDFPGIIKDLDKKINNISYKYLEHLKYSKILVYMFDINNDNIMEIYKNIKNVLVQYD 460 Query: 267 SELRKKIEIVGLSQIDTVDS-DTLARKKNELATQCG-QVPFEFSSITGHGIPQIL 319 + K E+V L++ID D+ + + N L Q + S++TG + + + Sbjct: 461 NIFLNKKEVVVLNKIDIYDNKENIQTFINNLKEQLKIHNIYYLSALTGENVEKTI 515 >gi|169622146|ref|XP_001804482.1| hypothetical protein SNOG_14289 [Phaeosphaeria nodorum SN15] gi|160704709|gb|EAT78160.2| hypothetical protein SNOG_14289 [Phaeosphaeria nodorum SN15] Length = 269 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 57/166 (34%), Positives = 95/166 (57%), Gaps = 17/166 (10%) Query: 115 IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST 174 +++A G GG GN F + N P A G G + + L+LK++AD+G++GLPNAGKST Sbjct: 1 MLIAAGSIGGLGNPGFMTPYNSRPKMATRGDEGLKLSLQLELKILADLGLVGLPNAGKST 60 Query: 175 FLASVTRAKPKIADYPFTTLYPNLG-IVKEGYK----------------EFILADIPGII 217 L +++ ++ ++ ++ FTTL PN+G +V + +K F +AD+PG+I Sbjct: 61 LLRALSNSRARVGNWAFTTLQPNVGTVVLDNHKGRPLVTSRRRNGELRDNFTVADVPGLI 120 Query: 218 KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 ++AH G+G FL+H ER VL ++ + A + + E+S Sbjct: 121 EDAHLDKGLGLGFLRHIERAAVLAFVIDLSAGDAVHALKLLWREVS 166 >gi|313213547|emb|CBY40493.1| unnamed protein product [Oikopleura dioica] Length = 164 Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 56/155 (36%), Positives = 90/155 (58%), Gaps = 3/155 (1%) Query: 44 DVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGIS 103 ++W++A+ L++L + + AQ G+ G +R G G+D+ + VPVG+ V G S Sbjct: 13 NIWLRASGKLSSLTHLK--DSYNAQDGKNGGTDHRYGRNGKDLEIEVPVGSLVKNSQG-S 69 Query: 104 LICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIG 163 ++ DL G ++ GG GG+GN F + N P A PG G+ ++L+ IAD G Sbjct: 70 VLIDLINCGDGFLIVSGGAGGYGNKEFANVDNPTPRTALPGEQGEIVNAEIELRSIADFG 129 Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL 198 ++GLPNAGKS+ ++T +++D P TTL P+L Sbjct: 130 LVGLPNAGKSSLTMTITNTDLEVSDIPGTTLIPHL 164 >gi|30172724|gb|AAD15550.2| unknown [Homo sapiens] Length = 232 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/188 (36%), Positives = 101/188 (53%), Gaps = 36/188 (19%) Query: 167 LPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAG 225 PNAGKS+ L+ V+ AKP IADY FTTL P LG I+ +K+ +AD+PG+I+ AH G Sbjct: 1 FPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKG 60 Query: 226 IGDRFLKHTERTHVLLHIVS----ALEENVQ--AAYQCIL---DELSAYNSELRKKIEIV 276 +G +FLKH ERT LL +V L + Q A++ I+ EL Y EL+ K ++ Sbjct: 61 MGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALL 120 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEF----------------------SSITGHG 314 ++++D D+ K +EL +Q Q P +F S++TG G Sbjct: 121 AVNKMDLPDAQD---KFHELMSQL-QNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEG 176 Query: 315 IPQILECL 322 I ++ C+ Sbjct: 177 IEELKNCI 184 >gi|309357399|emb|CAP35687.2| hypothetical protein CBG_18192 [Caenorhabditis briggsae AF16] Length = 1998 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/250 (29%), Positives = 121/250 (48%), Gaps = 35/250 (14%) Query: 59 FRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 + + ++ +G K G + VPVG +V + D LI + R ++A Sbjct: 73 LKNKMKIRSDNGGNATKTTLIGQHAKHQFFDVPVGIEVVDRDNNVLIARCSKPFGRYLIA 132 Query: 119 PGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLAS 178 GG GG+ +K G G+ + + LKL +IG++G PNAGKST L + Sbjct: 133 HGGQGGYVKTGYK------------GARGEALDVEIHLKLRPNIGLLGFPNAGKSTLLKA 180 Query: 179 VTRAKP-KIADYPFTTLYPNLG-----------IVKEGYKEFILADIPGIIKNAHQGAGI 226 + K KIA+Y FTT++P L ++++ +AD+PGII+ A Q G Sbjct: 181 LVPEKSVKIAEYAFTTVHPQLAFYKSKNDNNSSLLEDNMFTLSVADLPGIIEGASQNRGK 240 Query: 227 GDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILD-------ELSAYNSELRKKIEI 275 G +FLKH E V++ I+ + L+ ++ ++ L+ EL Y+ +L +K I Sbjct: 241 GYKFLKHLEYADVIVMIIDSQGFQLKNDLDCPFRTPLESVSLLNKELELYDPKLVRKPAI 300 Query: 276 VGLSQIDTVD 285 L++ DT+D Sbjct: 301 CILNKADTLD 310 >gi|47225414|emb|CAG11897.1| unnamed protein product [Tetraodon nigroviridis] Length = 258 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 78/208 (37%), Positives = 107/208 (51%), Gaps = 29/208 (13%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSN--LNTLIDFR 60 F+D ++Y+R G GG G GDVW+ A N L L D Sbjct: 4 FVDNLRLYVRGGSGGMGLPRLGGHGGNG------------GDVWVVAAKNTTLKRLKDKH 51 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ F A G R G +G+DV + PVG V ++G L DL+ +G R+++A G Sbjct: 52 PQRRFVAGTGANSSVRALKGERGQDVEIVAPVGVTVTTDEGKKL-GDLNADGDRVLVAKG 110 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G+GG + F+ S GQ K I L LKLIAD+G++G PNAGKS+ L +V+ Sbjct: 111 GSGGSFYSGFEPSK------------GQIKHIRLDLKLIADVGLVGFPNAGKSSLLMAVS 158 Query: 181 RAKPKIADYPFTTLYPNLGIVKEGYKEF 208 A P+IA Y FTTL P +G K YK++ Sbjct: 159 SATPQIASYAFTTLKPEIG--KLMYKDY 184 >gi|221102161|ref|XP_002155820.1| PREDICTED: similar to CG10628 CG10628-PA [Hydra magnipapillata] Length = 225 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/166 (39%), Positives = 98/166 (59%), Gaps = 17/166 (10%) Query: 39 GGRGGDVWIQATS--NLNTLIDFRYQQHFKAQHGEKGMKRNRSGAK-GEDVVLTVPVGTQ 95 GG GG+V+I+ + +L+T + + + A HG KRN+ K G DV + VP GT+ Sbjct: 66 GGDGGNVYIKCLNGGSLSTFAN-KENRRIVAGHGFPA-KRNQVRVKDGNDVYIIVPPGTE 123 Query: 96 VFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLK 155 V + + I DL++EGQ + + GG GG A Y G G+++ I L+ Sbjct: 124 VKSSEDVH-ISDLNEEGQTLKIVNGGAGG-----------SAKYENFNGQKGEKRNIVLE 171 Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV 201 LK IAD+ + G PNAGKS+ L +++RA+PK+ADYPFTT+ P +G + Sbjct: 172 LKSIADVALTGFPNAGKSSLLCALSRARPKVADYPFTTINPMVGSI 217 >gi|312066343|ref|XP_003136225.1| GTP-binding/GTP1/OBG domain containing protein [Loa loa] gi|307768611|gb|EFO27845.1| GTP-binding/GTP1/OBG domain containing protein [Loa loa] Length = 381 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 85/310 (27%), Positives = 136/310 (43%), Gaps = 42/310 (13%) Query: 5 DEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQH 64 D +++IR+G+GG G F G + ++ + Sbjct: 22 DCLRLFIRAGNGGQGLQRFNGVGGDGGDVIMVGHSKMTLEAMLKNAKH--------RVMK 73 Query: 65 FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGG 124 +AQ G + + G G +L VPVG V + LI + ++A GG GG Sbjct: 74 VQAQSGTNSSQTSLIGINGRPKILKVPVGVDVINAETKVLIARCSRPFFNYVIARGGRGG 133 Query: 125 FGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFL-ASVTRAK 183 F+++ G+ I L LKL +IG++G PNAGKST + A V + Sbjct: 134 CAENCFQATA------------GERFFIDLHLKLHPNIGLVGFPNAGKSTVMKALVPKKS 181 Query: 184 PKIADYPFTTLYPNLGIVKE----------GYKEFILADIPGIIKNAHQGAGIGDRFLKH 233 KIA YPFTT+ P +G + + +AD+PG+I+ A G G FLKH Sbjct: 182 IKIASYPFTTVKPQIGYINDFELDSTDDDDDSFSLSIADLPGLIEGAAMNRGRGREFLKH 241 Query: 234 TERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRK-------KIEIVGLSQID 282 E + +LL +V L+ ++ Y+ L+ ++ N EL K K I+ L++ID Sbjct: 242 LEFSDILLIVVDVLGFKLDLSLSNPYRNALETVALLNIELEKYDPALVMKPAIITLNKID 301 Query: 283 TVDSDTLARK 292 + + A++ Sbjct: 302 LPNGEQKAKE 311 >gi|170581280|ref|XP_001895615.1| GTP-binding/GTP1/OBG domian containing protein [Brugia malayi] gi|158597375|gb|EDP35541.1| GTP-binding/GTP1/OBG domian containing protein [Brugia malayi] Length = 389 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 87/318 (27%), Positives = 139/318 (43%), Gaps = 47/318 (14%) Query: 5 DEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQH 64 D ++++R+G+GG G F G + ++ + Sbjct: 28 DRLRLFVRAGNGGQGLQRFNGVGGNGGDVIMVGHSKMTFEAMLKNAKH--------RVLK 79 Query: 65 FKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGG 124 +AQ G + + G G +L VPVG + + LI + ++A GG+GG Sbjct: 80 VQAQSGMNSSQTSLIGINGRPKILKVPVGVDIINAETKMLIARCSRPFFNYVIARGGHGG 139 Query: 125 FGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFL-ASVTRAK 183 F+++ G+ + L LKL +IG+IG PNAGKST + A V + Sbjct: 140 CAENCFQATA------------GERFFVDLHLKLHPNIGLIGFPNAGKSTVMKALVPKRN 187 Query: 184 PKIADYPFTTLYPNLGIVKEGYKEF------------ILADIPGIIKNAHQGAGIGDRFL 231 KIA YPFTTL P L + E +AD+PG+++ A G G FL Sbjct: 188 IKIACYPFTTLKPQLCYINNFGSELESIDDDDDSFSLSIADLPGLLEGAALNRGRGREFL 247 Query: 232 KHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRK-------KIEIVGLSQ 280 KH E + +LL +V L+ ++ Y+ L+ ++ N EL K K I+ L++ Sbjct: 248 KHLEFSDILLMVVDVLGFKLDLSLNNPYRNALETVALLNXELEKYDPALVMKPTIITLNK 307 Query: 281 IDTVDSDTLARKKNELAT 298 ID + + +K NEL + Sbjct: 308 IDLPNGE---QKANELVS 322 >gi|119597287|gb|EAW76881.1| hypothetical protein, isoform CRA_d [Homo sapiens] Length = 282 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 74/235 (31%), Positives = 111/235 (47%), Gaps = 49/235 (20%) Query: 120 GGNGGFGNAHFKSSTNQAP----YYANPGILGQEKIIWLKLKLIADIGIIG-LPNAGKST 174 GG+GG G + N L Q K + + + +A +G PNAGKS+ Sbjct: 25 GGSGGMGYPRLGGEGGKGGDVWVVAQNRMTLKQLKDRYPRKRFVAGVGANSKFPNAGKSS 84 Query: 175 FLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKH 233 L+ V+ AKP IADY FTTL P LG I+ +K+ +AD+PG+I+ AH G+G +FLKH Sbjct: 85 LLSCVSHAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHKFLKH 144 Query: 234 TERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 ERT LL + EL Y EL+ K ++ ++++D D+ K Sbjct: 145 IERTRQLLFV-----------------ELELYKEELQTKPALLAVNKMDLPDAQD---KF 184 Query: 294 NELATQCGQVPFEF----------------------SSITGHGIPQILECLHDKI 326 +EL +Q Q P +F S++TG GI ++ C+ + Sbjct: 185 HELMSQL-QNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSL 238 >gi|323451980|gb|EGB07855.1| hypothetical protein AURANDRAFT_7122 [Aureococcus anophagefferens] Length = 112 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 45/104 (43%), Positives = 69/104 (66%), Gaps = 6/104 (5%) Query: 147 GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK---- 202 G+E + L+LK++AD+ ++GLPNAGKS+ L +++ A K+A Y FTTL P LG+V Sbjct: 3 GEEAFVDLELKILADVALVGLPNAGKSSLLRALSNADIKVAAYAFTTLAPQLGVVNYAAA 62 Query: 203 --EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + D+PG++++AH G G+G FL+H ER+ LLH+V Sbjct: 63 ATGDADAVRVLDVPGLVEDAHAGRGMGGEFLRHVERSAALLHVV 106 >gi|322706720|gb|EFY98300.1| GTP-binding protein Obg [Metarhizium anisopliae ARSEF 23] Length = 586 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 81/167 (48%), Gaps = 28/167 (16%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF S + P +A G + L+LKL+AD+G++GLPNAGKST L ++T ++ ++ Sbjct: 290 NPHFTSREHPKPIFATKGEEAVSMKLTLELKLLADVGLVGLPNAGKSTLLRALTNSRTRV 349 Query: 187 ADYPFTTLYPNLGIVK----------------------------EGYKEFILADIPGIIK 218 + FTTL PN+G V E F +ADIPG+I+ Sbjct: 350 GSWAFTTLQPNIGTVVLDKYSGQPTARSHRKPSIEADESSGAALEPRTRFTVADIPGLIE 409 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 AH G+G FL+H ER VL ++ N A + E+ Y Sbjct: 410 GAHLDRGLGIAFLRHVERAGVLAFVIDLAAGNAVTALNALWREVGLY 456 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/96 (42%), Positives = 61/96 (63%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+A++ I +G GG G +SF RE F+ G P+GG GG GG+++IQA +L + Sbjct: 61 FADKAELTIYAGRGGNGCVSFLREAFLPDGPPNGGDGGAGGNIYIQAAHGETSLHKLARR 120 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 + +A G+ G + G++GEDV++TVPVGT V E Sbjct: 121 RFIRAGRGKHGQGSAKGGSRGEDVIITVPVGTIVRE 156 >gi|322700994|gb|EFY92746.1| OBG family small GTPase [Metarhizium acridum CQMa 102] Length = 586 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 81/167 (48%), Gaps = 28/167 (16%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF S + P +A G + L+LKL+AD+G++GLPNAGKST L ++T ++ ++ Sbjct: 290 NPHFTSREHPKPVFATKGEEAVSMKLILELKLLADVGLVGLPNAGKSTLLRALTNSRTRV 349 Query: 187 ADYPFTTLYPNLGIVK----------------------------EGYKEFILADIPGIIK 218 + FTTL PN+G V E F +ADIPG+I+ Sbjct: 350 GSWAFTTLQPNIGTVVLDKYSGQPTARSHRKPSVETDESSGAALEPRTRFTVADIPGLIE 409 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 AH G+G FL+H ER VL ++ N A + E+ Y Sbjct: 410 GAHLDRGLGIAFLRHVERAGVLAFVIDLAAGNAVTALNALWREVGLY 456 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/96 (42%), Positives = 61/96 (63%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+A++ I +G GG G +SF RE F+ G P+GG GG GG+++IQA +L + Sbjct: 61 FADKAELTIYAGRGGNGCVSFLREAFLPDGPPNGGDGGAGGNIYIQAAHGETSLHKLARR 120 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 + +A G+ G + G++GEDV++TVPVGT V E Sbjct: 121 RFIRAGRGKHGQGSAKGGSRGEDVIITVPVGTIVRE 156 >gi|169862205|ref|XP_001837733.1| GTPase [Coprinopsis cinerea okayama7#130] gi|116501182|gb|EAU84077.1| GTPase [Coprinopsis cinerea okayama7#130] Length = 575 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 46/89 (51%), Positives = 67/89 (75%), Gaps = 2/89 (2%) Query: 116 ILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTF 175 ++A GG GG GN HF ++ N++P YA G G+ + L+LKL+AD+G++G+PNAGKST Sbjct: 275 LVASGGQGGAGNTHFLTTDNRSPKYATRGQEGERITLELELKLLADVGLVGMPNAGKSTL 334 Query: 176 LASVT--RAKPKIADYPFTTLYPNLGIVK 202 L ++T RAK ++A+YPFTTL P +GIV+ Sbjct: 335 LRALTGGRAKTEVANYPFTTLNPVVGIVR 363 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 2/96 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD V +R+G GG G +F REKF +G P GG+GGRG DV+I T +L TL Sbjct: 73 FLDHVIVTVRAGKGGDGCAAFHREKFKPYGPPSGGNGGRGADVYILPTPHLTTLSSV--P 130 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 + +A++G G ++G VL VP+GT V E Sbjct: 131 KKIRAENGTHGQGAWQNGKSAPPYVLRVPLGTIVRE 166 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 20/75 (26%), Positives = 38/75 (50%) Query: 208 FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS 267 F ++D PG+I A + G+G FL+ ER+ L++++ + + DEL Y + Sbjct: 432 FTISDNPGLISRASENHGLGHSFLRAMERSPALVYVIDLSAPDPWNELIVLRDELEKYEA 491 Query: 268 ELRKKIEIVGLSQID 282 + K +V ++ D Sbjct: 492 GMSTKARMVIANKAD 506 >gi|308487828|ref|XP_003106109.1| hypothetical protein CRE_20196 [Caenorhabditis remanei] gi|308254683|gb|EFO98635.1| hypothetical protein CRE_20196 [Caenorhabditis remanei] Length = 407 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 33/258 (12%) Query: 59 FRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 + + + +A +GE K + G + VP+G +V + SLI + +R ++A Sbjct: 73 LKSKMNIRADNGEAATKISLIGQHAKHQYFDVPIGIEVVNRENNSLISRCSKPFRRYLIA 132 Query: 119 PGGNGGFGNAHFK------SSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGK 172 GG GG+ ++K S N + G G + L LKL +IG++G PNAGK Sbjct: 133 RGGQGGYAKLNYKCVLFIYCSIN----FLFRGTKGDIFDVELHLKLRPNIGLLGFPNAGK 188 Query: 173 STFLASVTRAKP-KIADYPFTTLYPNLGIVK-----EGYK------EFILADIPGIIKNA 220 ST L ++ K KIADY FTT+ P + K +G+ +AD+PGII+ A Sbjct: 189 STLLKALVPEKSVKIADYAFTTVNPQVAFYKNETNNDGFNLEDPPYTLSVADLPGIIEGA 248 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSE-------L 269 + G G +FLKH E +++ ++ + L+ + ++ L+ +S N E L Sbjct: 249 SKNRGRGYQFLKHLEYADIIVMVIDSQGFQLKNELDCPFRNALESVSLLNKEVELYDQRL 308 Query: 270 RKKIEIVGLSQIDTVDSD 287 +K + L+++D ++ + Sbjct: 309 ARKPIVCVLNKVDALNEE 326 >gi|309266720|ref|XP_003086841.1| PREDICTED: GTP-binding protein 10-like, partial [Mus musculus] Length = 210 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 97/186 (52%), Gaps = 34/186 (18%) Query: 168 PNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGI 226 PNAGKS+ L+ V+ A P IADY FTTL P LG I+ +K+ +AD+PG+I+ AH G+ Sbjct: 1 PNAGKSSLLSRVSHATPVIADYAFTTLRPELGKIMYNDFKQISVADLPGLIEGAHMNKGM 60 Query: 227 GDRFLKHTERTHVLLHIVS------ALEENVQAAYQCIL---DELSAYNSELRKKIEIVG 277 G +FLKH ERT LL +V + + A++ I+ EL Y EL+ K ++ Sbjct: 61 GHKFLKHLERTRQLLFVVDISGFQLSSVTPYRTAFETIILLTKELELYKEELQTKPALLA 120 Query: 278 LSQIDTVDSDTLARKKNELATQ------------CGQVP---FEF------SSITGHGIP 316 ++++D D+ K EL Q +P EF S++TG GI Sbjct: 121 INKMDLPDAQV---KLQELMKQLLSPEDFLHLFETKMIPEKALEFQHIVPISTVTGEGIA 177 Query: 317 QILECL 322 ++ C+ Sbjct: 178 ELKSCI 183 >gi|313241734|emb|CBY33953.1| unnamed protein product [Oikopleura dioica] Length = 483 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 10/145 (6%) Query: 153 WLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILA 211 +++LK IAD+G IG PNAGKST L ++++A P+I+ PFTT+ PN+G++K + + LA Sbjct: 206 FVELKRIADVGFIGFPNAGKSTLLKALSKANPQISAAPFTTIRPNIGVIKFDDGRRIELA 265 Query: 212 DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS----ALEENV--QAAYQCI---LDEL 262 D+PG+I AH G G G +FL ER L +V L+ N + A++ I + EL Sbjct: 266 DLPGLIDGAHSGRGYGHQFLHMIERNSCHLMVVDINGFQLDANAPFRTAFETIVQLVSEL 325 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSD 287 YN + K + L++ D DS+ Sbjct: 326 ELYNEHISSKPFNLVLTKADIPDSN 350 >gi|77410320|ref|ZP_00786743.1| GTP-binding protein, GTP1/Obg family [Streptococcus agalactiae COH1] gi|77171071|gb|EAO74517.1| GTP-binding protein, GTP1/Obg family [Streptococcus agalactiae COH1] Length = 125 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 52/125 (41%), Positives = 82/125 (65%) Query: 56 LIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRI 115 ++DFRY ++FKA+ GEKGM + G ED+++++P GT V + + +I DL + Q Sbjct: 1 MMDFRYNRNFKAKAGEKGMTKGMHGRGAEDLIVSLPPGTTVRDANTGKVITDLVEHDQEF 60 Query: 116 ILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTF 175 ++A GG GG GN F + N AP A G G+E+ + L+LK++AD+G++G P+ GKST Sbjct: 61 VVARGGRGGRGNIRFATPRNPAPEIAENGEPGEERELQLELKILADVGLVGFPSVGKSTL 120 Query: 176 LASVT 180 L+ V+ Sbjct: 121 LSVVS 125 >gi|313235753|emb|CBY11203.1| unnamed protein product [Oikopleura dioica] Length = 405 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 10/145 (6%) Query: 153 WLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILA 211 +++LK IAD+G IG PNAGKST L ++++A P+I+ PFTT+ PN+G++K + + LA Sbjct: 128 FVELKRIADVGFIGFPNAGKSTLLKALSKANPQISAAPFTTIRPNIGVIKFDDGRRIELA 187 Query: 212 DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS----ALEENV--QAAYQCI---LDEL 262 D+PG+I AH G G G +FL ER L +V L+ N + A++ I + EL Sbjct: 188 DLPGLIDGAHSGRGYGHQFLHMIERNSCHLMVVDINGFQLDANAPFRTAFETIVQLVSEL 247 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSD 287 YN + K + L++ D DS+ Sbjct: 248 GLYNEHISSKPFNLVLTKADIPDSN 272 >gi|67517225|ref|XP_658493.1| hypothetical protein AN0889.2 [Aspergillus nidulans FGSC A4] gi|40746762|gb|EAA65918.1| hypothetical protein AN0889.2 [Aspergillus nidulans FGSC A4] gi|259488825|tpe|CBF88584.1| TPA: GTP-binding protein Obg (AFU_orthologue; AFUA_1G15500) [Aspergillus nidulans FGSC A4] Length = 555 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 88/159 (55%), Gaps = 16/159 (10%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N H+ S N P +A+ G G+ + +LKL+AD+G++G PNAGKST L S+T ++ +I Sbjct: 276 NPHWVSRENPRPKFASRGEGGKRLELEFELKLLADVGLVGKPNAGKSTLLRSLTNSRTRI 335 Query: 187 ADYPFTTLYPNLGIV---------------KEGYKEFILADIPGIIKNAHQGAGIGDRFL 231 ++ FTTL PN+G V K K F +ADIPG+IK AH G+G FL Sbjct: 336 GNWAFTTLEPNIGTVVIDNDKGRPLVELKNKPPRKRFTIADIPGLIKGAHLDRGLGLGFL 395 Query: 232 KHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR 270 +H ER +L +V + Q + +EL Y ELR Sbjct: 396 RHIERAGILAFVVDLSAGDPVQELQELWNELGKY-EELR 433 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/98 (44%), Positives = 60/98 (61%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + I +GDGG G +SF+REK+I G P+GG GG GG V+IQA L +L Sbjct: 73 FQDRCRSTIYAGDGGNGCVSFQREKYIPEGPPNGGDGGSGGSVYIQAVEGLTSLHKLARS 132 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEED 100 +A G+ G +++ G +GEDV++ VPVGT V E D Sbjct: 133 GVIRATRGKNGQGKSKGGKRGEDVLIQVPVGTVVREVD 170 >gi|159487607|ref|XP_001701814.1| predicted protein [Chlamydomonas reinhardtii] gi|158281033|gb|EDP06789.1| predicted protein [Chlamydomonas reinhardtii] Length = 131 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 83/131 (63%), Gaps = 2/131 (1%) Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHFKS-STNQAPYYANPGILGQEKIIWLKLKLIADIG 163 + +L Q GQ +++A GG GG GN F + + AP + PG G+ + + L+ +L+AD+G Sbjct: 1 VVELTQHGQELLVARGGAGGRGNKSFPALAGRPAPDTSEPGQPGELRWVILETRLLADVG 60 Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQ 222 +GLPNAGKST L ++T A+ K+ Y FTT+ P LG + E + ADIPG+++ AH Sbjct: 61 FVGLPNAGKSTLLGAITAARAKVGAYAFTTVRPQLGTITFEDGSRLVTADIPGLVQGAHA 120 Query: 223 GAGIGDRFLKH 233 G G+ FL+H Sbjct: 121 NKGRGNAFLRH 131 >gi|261200955|ref|XP_002626878.1| GTP-binding protein Obg [Ajellomyces dermatitidis SLH14081] gi|239593950|gb|EEQ76531.1| GTP-binding protein Obg [Ajellomyces dermatitidis SLH14081] gi|239607174|gb|EEQ84161.1| GTP-binding protein Obg [Ajellomyces dermatitidis ER-3] gi|327351133|gb|EGE79990.1| GTP-binding protein Obg [Ajellomyces dermatitidis ATCC 18188] Length = 575 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 62/162 (38%), Positives = 91/162 (56%), Gaps = 17/162 (10%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N F S+TN P +A G G + + +LKL+AD+G++GLPNAGKST L S+T ++ +I Sbjct: 284 NPTFASNTNPKPRFATRGEKGLKLELEFELKLLADVGLVGLPNAGKSTLLRSITNSRTRI 343 Query: 187 ADYPFTTLYPNLGIV-------------KEGYKE---FILADIPGIIKNAHQGAGIGDRF 230 ++ FTTL P +G V K G+ F +ADIPG+I+ AH G+G F Sbjct: 344 GNWAFTTLSPKIGTVVIDNHSGRPLVEPKPGHPRRTNFTIADIPGLIEGAHLDKGLGLGF 403 Query: 231 LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 L+H ER VL ++ + A + + EL YN LR++ Sbjct: 404 LRHVERAGVLAFVIDLSAGDAVQALKGLWRELYEYN-RLRER 444 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/96 (42%), Positives = 58/96 (60%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + I +G GG G +SF REK+I+ G +GG GG GG+++IQA +L + Sbjct: 92 FQDRCTLTIHAGSGGNGCVSFLREKYIDDGPANGGDGGSGGNIFIQAVEGQTSLHKLARK 151 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 KA HG G +++ G +G+DV+L VPVGT V E Sbjct: 152 GIIKAGHGRSGQGKSKGGQRGKDVLLQVPVGTVVRE 187 >gi|149490501|ref|XP_001515607.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus] Length = 254 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 66/189 (34%), Positives = 100/189 (52%), Gaps = 27/189 (14%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWI--QATSNLNTLIDFR 60 F+D +++ + GG GG+ + R G GDVW+ Q L + D Sbjct: 79 FIDNLRLFTQ---GGTGGMGYPRLGGEGGKG---------GDVWVVAQKGMTLKKIKDLY 126 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 Q+ F A+ G R G KG+D + PVG V +E G +I +L+++ ++++A G Sbjct: 127 PQKRFVAERGANSQVRALKGQKGKDRAIPAPVGISVTDESG-RVIGELNKDKDKVLVAQG 185 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT 180 G GG ++F + GQ++II L LKLIADIG++G PNAGKS+ L+ V+ Sbjct: 186 GLGGCLLSNFLP------------LKGQKRIINLDLKLIADIGLVGFPNAGKSSLLSKVS 233 Query: 181 RAKPKIADY 189 A P+IADY Sbjct: 234 HAHPEIADY 242 >gi|330883568|gb|EGH17717.1| GTPase CgtA [Pseudomonas syringae pv. glycinea str. race 4] Length = 155 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/140 (39%), Positives = 81/140 (57%), Gaps = 18/140 (12%) Query: 183 KPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KPK+ADYPFTTL PNLG+V + +K F++ADIPG+I+ A GAG+G RFLKH RT +LL Sbjct: 1 KPKVADYPFTTLVPNLGVVSVDRWKSFVVADIPGLIEGASDGAGLGIRFLKHLARTRLLL 60 Query: 242 HIVSAL---EENVQAAYQCILDELSAYNSEL--RKKIEIVG------------LSQIDTV 284 H+V E + A + I++EL ++ L R + ++G +S+ + Sbjct: 61 HLVDMAPLDESSAPDAAEVIVNELEKFSPSLAERDRWLVLGSGQSASESVLELVSRDHAI 120 Query: 285 DSDTLARKKNELATQCGQVP 304 + ++ R TQ GQ P Sbjct: 121 EVHSVHRSAGFKLTQLGQFP 140 >gi|171688498|ref|XP_001909189.1| hypothetical protein [Podospora anserina S mat+] gi|170944211|emb|CAP70321.1| unnamed protein product [Podospora anserina S mat+] Length = 564 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 34/210 (16%) Query: 90 VPVGTQVFEEDGISLICDLDQEGQR-IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQ 148 +P+ ++ ++ + DL + R I+LA GG GG GN HF S + P +A G Sbjct: 230 LPIRDRLLKQPKAPVYLDLSRPTPRPILLAAGGLGGLGNPHFVSKNLRKPMFATRGENAM 289 Query: 149 EKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------- 201 I ++LKL+AD+G++GLPNAGKST L +VT ++ ++ ++ FTTL PN+G V Sbjct: 290 TMEIEMELKLLADVGLVGLPNAGKSTLLRAVTNSRARVGNWAFTTLQPNIGTVVLDNNKG 349 Query: 202 ---------------KEGYKE-----------FILADIPGIIKNAHQGAGIGDRFLKHTE 235 + + E F +ADIPG+I+ AH G+G FL+H E Sbjct: 350 RPVVKSFKVTAEDVSDDPWAEPAEPELQQRTKFTIADIPGLIEGAHLDRGLGIAFLRHVE 409 Query: 236 RTHVLLHIVSALEENVQAAYQCILDELSAY 265 R VL ++ N A + + E+ Y Sbjct: 410 RAGVLAFVIDLGNGNAVEALKALWLEVGLY 439 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/96 (42%), Positives = 60/96 (62%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+AK+ + +G GG G ISF RE ++ G P+GG GG GG ++IQA + +L + Sbjct: 72 FADKAKLTLHAGPGGHGCISFLREAYMADGPPNGGDGGHGGSIYIQAVHSETSLHKLARR 131 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 + +A G+ G + G +GEDV+L+VPVGT V E Sbjct: 132 KFARAGRGKSGQGSAKGGQRGEDVILSVPVGTVVRE 167 >gi|164660830|ref|XP_001731538.1| hypothetical protein MGL_1721 [Malassezia globosa CBS 7966] gi|159105438|gb|EDP44324.1| hypothetical protein MGL_1721 [Malassezia globosa CBS 7966] Length = 218 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 23/165 (13%) Query: 147 GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-- 204 G+ ++ L+ K +DIG++GLPNAGKST L ++RA+ ++ Y FTTL PNLG+V+ G Sbjct: 3 GESLLLSLEYKQPSDIGLVGLPNAGKSTLLRCLSRAEAEVGSYSFTTLRPNLGVVRFGAD 62 Query: 205 -----------------YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 +AD+PG++++A + G+G FL+H ER L++IV Sbjct: 63 GKIISDEQHQHQHQNHETMRLTIADLPGLVRDASKNRGLGHDFLRHIERCRSLVYIVDFG 122 Query: 248 EENVQAAYQCIL--DELSAYNSELRKKIEIVGLSQIDTV--DSDT 288 N + + +L EL Y L ++ +V ++ D + D DT Sbjct: 123 PSNPRPSSDVVLLNRELETYRPGLTDRVTMVVANKADLLGGDHDT 167 >gi|33322659|gb|AAQ07063.1|AF496377_1 GTP-binding protein Obg [Lactobacillus delbrueckii subsp. lactis] Length = 114 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 56/114 (49%), Positives = 75/114 (65%), Gaps = 7/114 (6%) Query: 180 TRAKPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 T AKPKIA Y FTTL PNLG+V +G ++F + D+PG+IK A QG G G +FL+H ERT Sbjct: 1 TSAKPKIAAYQFTTLKPNLGMVLLPDG-RDFSMXDLPGLIKGASQGVGXGIQFLRHVERT 59 Query: 238 HVLLHIVSALEENVQAA---YQCILDELSAYN-SELRKKIEIVGLSQIDTVDSD 287 V+LH+VS N + A Y+ IL EL++Y +L K EI+ SQ+D +D Sbjct: 60 KVILHMVSMDPNNGRDAYEDYETILHELASYTEDDLSSKREIIVASQMDIPGAD 113 >gi|255003131|ref|ZP_05278095.1| GTPase ObgE [Anaplasma marginale str. Puerto Rico] Length = 100 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 56/100 (56%), Positives = 77/100 (77%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DEAK++++ G GG G +SFRREKFIEFGGPDGG+GG GG V A+S +NTL+ FR Sbjct: 1 MSFVDEAKIHVKGGKGGDGCVSFRREKFIEFGGPDGGNGGNGGSVIFVASSAVNTLLYFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEED 100 Y QH +A++G+ G + + GA G + V+ VPVGTQ+++ED Sbjct: 61 YNQHIRAENGKAGSGKGKFGAAGRNRVVEVPVGTQLYDED 100 >gi|226288931|gb|EEH44443.1| GTPase MTG2 [Paracoccidioides brasiliensis Pb18] Length = 573 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 59/156 (37%), Positives = 89/156 (57%), Gaps = 16/156 (10%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N +F S+TN P +A G G + + +LKL+AD+G++GLPNAGKST L S+T ++ +I Sbjct: 283 NPNFVSNTNPKPRFATRGEKGIKLELEFELKLLADVGLVGLPNAGKSTLLRSITNSRTRI 342 Query: 187 ADYPFTTLYPNLGIV-------------KEGYKE---FILADIPGIIKNAHQGAGIGDRF 230 ++ FTTL P +G V K G FI+ADIPG+I+ AH G+G F Sbjct: 343 GNWAFTTLSPKIGTVVIDNHSGRPLIEPKPGCPRRTNFIIADIPGLIEGAHLDRGLGLGF 402 Query: 231 LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN 266 L+H ER +L ++ + A + + EL+ Y+ Sbjct: 403 LRHVERAGILAFVIDLSAGDAVQALKGLWRELNEYS 438 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 58/96 (60%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + +G GG G +SF REK+I+ G +GG GG GG+++IQA +L + Sbjct: 91 FQDRCTLTLYAGSGGNGCVSFLREKYIDDGPANGGDGGSGGNIYIQAIEGQTSLHKLARR 150 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 KA HG G +++ G +G+DV+L VPVGT + E Sbjct: 151 GVIKAGHGRSGQGKSQGGQRGKDVLLQVPVGTVIRE 186 >gi|295671458|ref|XP_002796276.1| mitochondrial GTPase [Paracoccidioides brasiliensis Pb01] gi|226284409|gb|EEH39975.1| mitochondrial GTPase [Paracoccidioides brasiliensis Pb01] Length = 1229 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 63/183 (34%), Positives = 99/183 (54%), Gaps = 22/183 (12%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N +F S+TN P +A G G + + +LKL+AD+G++GLPNAGKST L S+T ++ +I Sbjct: 362 NPNFVSNTNPKPRFATRGEKGIKLELEFELKLLADVGLVGLPNAGKSTLLRSITNSRTRI 421 Query: 187 ADYPFTTLYPNLGIV-------------KEGYKE---FILADIPGIIKNAHQGAGIGDRF 230 ++ FTTL P +G V K G FI+ADIPG+I+ AH G+G F Sbjct: 422 GNWAFTTLSPKIGTVVIDNHSVRPLIEPKPGCPRRTNFIIADIPGLIEGAHLDKGLGLGF 481 Query: 231 LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS------ELRKKIEIVGLSQIDTV 284 L+H ER +L ++ + A + + EL+ Y+ L+ + ++ + +D Sbjct: 482 LRHVERAGILAFVIDLSAGDAVQALKGLWRELNEYSRLQDRELNLKTQHRLISWTPLDHN 541 Query: 285 DSD 287 SD Sbjct: 542 SSD 544 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 58/96 (60%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + +G GG G +SF REK+I+ G +GG GG GG+++IQA +L + Sbjct: 170 FQDRCTLTLYAGSGGNGCVSFLREKYIDDGPANGGDGGSGGNIYIQAIEGQTSLHKLARR 229 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 KA HG G +++ G +G+DV+L VPVGT + E Sbjct: 230 GVIKAGHGRSGQGKSQGGQRGKDVLLQVPVGTVIRE 265 >gi|255930429|ref|XP_002556774.1| Pc06g01690 [Penicillium chrysogenum Wisconsin 54-1255] gi|211581387|emb|CAP79162.1| Pc06g01690 [Penicillium chrysogenum Wisconsin 54-1255] Length = 578 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/152 (35%), Positives = 82/152 (53%), Gaps = 13/152 (8%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N HF + T P +A+ G G + +LKL+AD+G++G PNAGKST L S+T ++ +I Sbjct: 296 NPHFATRTMGRPKFASRGEGGMMLELDFELKLLADVGLVGKPNAGKSTLLRSLTNSRTRI 355 Query: 187 ADYPFTTLYPNLGIV-------------KEGYKEFILADIPGIIKNAHQGAGIGDRFLKH 233 ++ FTTL P++G V K F +ADIPG+++ AH G+G FL+H Sbjct: 356 GNWEFTTLSPSIGTVITDDMKGRPLVESKARRTHFTIADIPGLVEGAHLDRGLGLGFLRH 415 Query: 234 TERTHVLLHIVSALEENVQAAYQCILDELSAY 265 +R +L +V + Q + EL Y Sbjct: 416 IDRAGILAFVVDLSRGDPVQELQKLWHELGEY 447 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 3/116 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+ +V + +G GG G +++ REK++E G P+GG GG GG ++IQ L +L + Sbjct: 81 FQDKCRVKVHAGSGGHGCVAYLREKYVEEGPPNGGDGGSGGGIYIQTVEGLTSLHKLARR 140 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILA 118 +A G G +++ G +GEDV+L VPVGT V E +S +++E RI A Sbjct: 141 GIIRASRGRNGQGKSKGGKRGEDVLLQVPVGTVVRE---VSRYDPVEEEWARIKAA 193 >gi|302682564|ref|XP_003030963.1| hypothetical protein SCHCODRAFT_68519 [Schizophyllum commune H4-8] gi|300104655|gb|EFI96060.1| hypothetical protein SCHCODRAFT_68519 [Schizophyllum commune H4-8] Length = 573 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 53/128 (41%), Positives = 74/128 (57%), Gaps = 17/128 (13%) Query: 77 NRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQ 136 +R K EDV P+G + E G+ ++A GG GG GN HF N+ Sbjct: 231 DREFTKEEDV--DAPLGVRKHEPMGV-------------LVATGGPGGLGNPHFLGENNR 275 Query: 137 APYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT--RAKPKIADYPFTTL 194 +P YA G G+ + L+LKL+ADIG++G PNAGKST L ++T R K ++A Y FTTL Sbjct: 276 SPKYATRGRPGERVTLALELKLVADIGLVGFPNAGKSTLLRALTGGRVKTEVAGYAFTTL 335 Query: 195 YPNLGIVK 202 P +G+V+ Sbjct: 336 NPVVGVVR 343 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 41/75 (54%) Query: 208 FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS 267 F +AD PG+I+ A + G+G FLK ER+ L+++V E+ Q + DEL Y Sbjct: 408 FTVADNPGLIERASENVGLGHSFLKSMERSLALVYVVDLSGEDPQKELSVLRDELEKYQP 467 Query: 268 ELRKKIEIVGLSQID 282 L +K +V ++ D Sbjct: 468 MLSEKACMVIANKAD 482 >gi|163785655|ref|ZP_02180195.1| GTPase ObgE [Hydrogenivirga sp. 128-5-R1-1] gi|159879077|gb|EDP73041.1| GTPase ObgE [Hydrogenivirga sp. 128-5-R1-1] Length = 150 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 53/115 (46%), Positives = 82/115 (71%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+AK+Y+++GDGG G +++RREKF+ GGP GG+GG+GGDV ++A + L TL DF+++ Sbjct: 2 FVDKAKIYVKAGDGGRGCVAWRREKFVPMGGPAGGNGGKGGDVILKADNRLQTLYDFKHK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIIL 117 HFKA G+ G N+ G ED+++ VPVGT V + +I DL Q ++++L Sbjct: 62 VHFKADRGQHGSGSNKHGRNAEDLIIKVPVGTVVKDAQTGEVIADLTQTDRKLLL 116 >gi|321256363|ref|XP_003193373.1| GTPase [Cryptococcus gattii WM276] gi|317459843|gb|ADV21586.1| GTPase, putative [Cryptococcus gattii WM276] Length = 537 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 100/419 (23%), Positives = 162/419 (38%), Gaps = 120/419 (28%) Query: 32 GGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVP 91 P GG+G GG V++ + L +L R + G G + G KGED+++ VP Sbjct: 90 SSPSGGNGAHGGSVYVTTSPELTSLATVR--KRLIGGAGGSGGGAFKHGRKGEDLIVQVP 147 Query: 92 VGTQVFE---------------EDGISLICDLDQEGQRIILA-PGGNGGFGNAHF----- 130 VGT V E + G+S + QR LA P G + Sbjct: 148 VGTIVRELKREGEEERMEREEDDLGLSDADKKKKRWQRWFLAHPSTKGEVSEEEYTDAED 207 Query: 131 -----------KSSTNQAP---------------------------YYANP-----GILG 147 S +Q P ++ +P G L Sbjct: 208 LLRREKRWIPHTPSFDQTPPLYLDITEPLDEPVLLASGGAGGLGNPFFTSPRLASRGTLP 267 Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----- 202 +LKL+AD+G++G PNAGKST L ++T + ++A Y FTTL P +G+V+ Sbjct: 268 PTHTFEFELKLLADVGLVGFPNAGKSTILRALTGRRAEVAGYQFTTLNPQIGVVRIYEDG 327 Query: 203 ---EGYKE----------------------------------------FILADIPGIIKN 219 G++E F L+D PG++ Sbjct: 328 SWGVGHEEVVETWIEREREDLSRQTGSPFPASRTKNRQDKLERLERLRFTLSDNPGLLPM 387 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A Q G+G FL+ ER+ VL +++ + + Q + +EL AY L ++ +V L+ Sbjct: 388 ASQNVGLGHSFLRSIERSPVLAYVLDLTKPSPVEDLQVLKEELEAYKPGLSERAAVVVLN 447 Query: 280 QIDTVDSDTLARKKNEL-----ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 + D V + ++ ++ A G+V S G G+ +++ L D + R E Sbjct: 448 KADGVPEEEGKKRVEDVKAFVNAHGGGEV-IILSGRYGLGMERLVAVLADNVEKARTER 505 >gi|7671204|gb|AAF66421.1| CgtA [Vibrio harveyi] Length = 99 Score = 92.8 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 57/98 (58%), Positives = 76/98 (77%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DEA V +++GDGG+G +SF REKFI GGPDGG GG GGDV+IQA NLNTLID+R Sbjct: 1 MKFVDEAVVKVQAGDGGSGVVSFWREKFITKGGPDGGDGGDGGDVYIQADENLNTLIDYR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 +Q+ ++A+ GE G N +G +G+D+ L VPVGT+ + Sbjct: 61 FQRFYEAERGENGRGGNCTGKRGKDITLRVPVGTRAVD 98 >gi|331217187|ref|XP_003321272.1| GTPase ObgE [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309300262|gb|EFP76853.1| GTPase ObgE [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 588 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 51/183 (27%) Query: 116 ILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTF 175 ++A GG GG GN++F + P +A G G+ + L+LK +ADIG++G PN+GKST Sbjct: 271 LIAKGGEGGLGNSNFSGNQTTLPRFATRGKKGEVIELELELKTLADIGLVGFPNSGKSTL 330 Query: 176 LASVTRAKPKIADYPFTTLYPNLGIV-------------------KEGYKEFI------- 209 + ++T ++ +IA YPFTTL P +G + ++E++ Sbjct: 331 IHTLTNSRAEIAPYPFTTLNPQIGTLIIFNDGSWDLDEPTDAINHSPSHREYLDANSATD 390 Query: 210 -------------------------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 +AD PG++ A + G+G FL+H ER+ +L+ +V Sbjct: 391 LIRDRSNRQRSSSHSPRKCESIRLTIADCPGLLPKASENVGLGHAFLRHIERSRMLVVVV 450 Query: 245 SAL 247 + Sbjct: 451 DLM 453 >gi|83273483|ref|XP_729418.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23487173|gb|EAA20983.1| GTP-binding protein-related [Plasmodium yoelii yoelii] Length = 553 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 116/203 (57%), Gaps = 7/203 (3%) Query: 3 FLDEAKVYIRSGDGGAG---GISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDF 59 F D + ++ G+GG G +F ++K ++ GG GG+GGD+++ ++ ++ Sbjct: 62 FHDRCIINVKGGNGGDGICCFTTFSQKKNKKYAS--GGRGGKGGDIYLIGDKKIDNFLNL 119 Query: 60 RYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAP 119 + + + A +G KG N+ G G+D + +P+ T ++E++ I + + Q++++A Sbjct: 120 KLKSFYYAGNGGKGCNNNQQGENGKDEYIKIPINTIIYEDN--KFINFIHSDYQKVLVAK 177 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASV 179 GG GG GN +++ + + PY G +EK I LK D+GIIG PN GKST L + Sbjct: 178 GGKGGKGNYSYRTKSLKIPYVCQFGEKTKEKQIILKKLFFTDLGIIGYPNVGKSTLLNKI 237 Query: 180 TRAKPKIADYPFTTLYPNLGIVK 202 T A KIA+Y +T+L+PN GI K Sbjct: 238 TNANVKIANYSYTSLFPNFGIYK 260 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 18/78 (23%), Positives = 43/78 (55%), Gaps = 1/78 (1%) Query: 206 KEFILADIPGIIKNAHQG-AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 + + + D PGII+ + + + ++L+H + + +L+++ + Y+ I + L Sbjct: 324 RNYTVIDFPGIIEGLDKKLSNVSYKYLEHLKYSKILIYMFDINNNCIVETYKNIKNVLVQ 383 Query: 265 YNSELRKKIEIVGLSQID 282 Y++ KK E++ L++ID Sbjct: 384 YDTIFEKKKEVIILNKID 401 >gi|325528036|gb|EGD05257.1| GTPase CgtA [Burkholderia sp. TJI49] Length = 179 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 87/143 (60%), Gaps = 7/143 (4%) Query: 191 FTTLYPNLGIVKEG-YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SAL 247 FTTL PNLG+V+ G K F++ADIPG+I+ A +GAG+G +FL+H +RT VLLH+V + Sbjct: 1 FTTLAPNLGVVRVGPSKSFVIADIPGLIEGAAEGAGLGHQFLRHLQRTGVLLHLVDLAPF 60 Query: 248 EENVQ--AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQ--V 303 +E+V A + I+ EL Y+ L +K + L+++D V D + ++ + G Sbjct: 61 DESVDPVAEAKAIVGELRKYDEALYEKPRWLVLNKLDMVPEDEREARVDDFLERFGWDGP 120 Query: 304 PFEFSSITGHGIPQILECLHDKI 326 FE S++TG G + ++D + Sbjct: 121 VFEISALTGQGCEALCYAIYDYL 143 >gi|225681856|gb|EEH20140.1| mitochondrial GTPase [Paracoccidioides brasiliensis Pb03] Length = 1106 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/156 (37%), Positives = 89/156 (57%), Gaps = 16/156 (10%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N +F S+TN P +A G G + + +LKL+AD+G++GLPNAGKST L S+T ++ +I Sbjct: 204 NPNFVSNTNPKPRFATRGEKGIKLELEFELKLLADVGLVGLPNAGKSTLLRSITNSRTRI 263 Query: 187 ADYPFTTLYPNLGIV-------------KEGYKE---FILADIPGIIKNAHQGAGIGDRF 230 ++ FTTL P +G V K G FI+ADIPG+I+ AH G+G F Sbjct: 264 GNWAFTTLSPKIGTVVIDNHSGRPLIEPKPGCPRRTNFIIADIPGLIEGAHLDRGLGLGF 323 Query: 231 LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN 266 L+H ER +L ++ + A + + EL+ Y+ Sbjct: 324 LRHVERAGILAFVIDLSAGDAVQALKGLWRELNEYS 359 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 51/82 (62%) Query: 17 GAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKR 76 G G +SF REK+I+ G +GG GG GG+++IQA +L + KA HG G + Sbjct: 26 GNGCVSFLREKYIDDGPANGGDGGSGGNIYIQAIEGQTSLHKLARRGVIKAGHGRSGQGK 85 Query: 77 NRSGAKGEDVVLTVPVGTQVFE 98 ++ G +G+DV+L VPVGT + E Sbjct: 86 SQGGQRGKDVLLQVPVGTVIRE 107 >gi|3599920|gb|AAC36496.1| GTP-binding protein homolog [Lawsonia intracellularis] Length = 115 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/114 (50%), Positives = 79/114 (69%), Gaps = 2/114 (1%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+DE + + +G GG G +SFRREKFI GGP+GG GG GG++ +A S L TL DFR Sbjct: 1 MRFVDEVTISVSAGKGGNGCVSFRREKFIPKGGPNGGDGGDGGNIIFKADSRLLTLYDFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEE--DGISLICDLDQEG 112 Q+H++AQ+GE G R G KGED++L +PVGT +FE+ D + DLD+ G Sbjct: 61 VQRHYRAQNGEGGKGSQRHGKKGEDLILHLPVGTIIFEQLLDKEYFLVDLDRPG 114 >gi|71032369|ref|XP_765826.1| hypothetical protein [Theileria parva strain Muguga] gi|68352783|gb|EAN33543.1| hypothetical protein TP01_0299 [Theileria parva] Length = 388 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 50/211 (23%) Query: 134 TNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTT 193 +N P G G ++++ L K I+DI +IG PN+GKS+ + +T A+P++A++PF+T Sbjct: 37 SNVVPRICERGEEGIKRVVKLIYKKISDIALIGKPNSGKSSVIRRLTNARPRVANFPFST 96 Query: 194 LYPNLGIVKE-------------------------------GYK---------------- 206 +P GI+ + GY+ Sbjct: 97 RFPIHGILNQTQHDTNQVDKVGSAESVEQETEETEDEFDSCGYESDEEIDDTEEQIDVTD 156 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 L D+PG+I + +G G+G FL+ E + L +++ + ++ Y + EL Sbjct: 157 PGDRISLVDVPGLIDGSSEGKGLGHDFLRQIEHSKTLSYVIDSSNQDPLGDYMSVRRELE 216 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 YN E+ +K EI+ L++ID +D+ T+ + N Sbjct: 217 LYNPEILEKDEIILLNKIDLIDNQTIFKLIN 247 >gi|325117328|emb|CBZ52880.1| putative GTP-binding protein [Neospora caninum Liverpool] Length = 511 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 77/297 (25%), Positives = 135/297 (45%), Gaps = 41/297 (13%) Query: 59 FRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQR---- 114 + ++ +A G G +R G +D V+ VPVGT V + L EG+R Sbjct: 69 LQLEEKLRADDGGDGEGTSR-GIHAKDKVVKVPVGTIVRKRVSTGR---LSPEGRRYKQS 124 Query: 115 ------------IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADI 162 + +A GG GG + FK + P PG + + L+L+L+ D+ Sbjct: 125 LFWFQFLFDKQSLTVAAGGRGGLAPSTFKKKDGRLP---EPG---ERNFLELELRLVNDV 178 Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNA 220 ++G PN+GK++F A+VTR + KI T P++G ++ +G EF L D+P + A Sbjct: 179 ALLGAPNSGKTSFAAAVTRYQSKIGSEGMQTRRPHIGTLRYVDGV-EFKLMDLPALCPGA 237 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 HQ G R L+H R+ +L++++ + Q + K+ ++ Q Sbjct: 238 HQDKARGMRILRHLYRSRLLVYVIDVARGRALSPVQ---------DGRKGKERSLLTDDQ 288 Query: 281 IDTVDSDTLARKKNEL--ATQCGQVPFEFSSITGHGIP-QILECLHDKIFSIRGENE 334 + D+++ R+ + A G F+ +TG G P + L +++ R +NE Sbjct: 289 SRSGDAESYERRPEGVGEAGWGGDHATSFAGVTGRGDPFEDFLYLREEVMKHRKDNE 345 >gi|115397661|ref|XP_001214422.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114192613|gb|EAU34313.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 545 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/154 (37%), Positives = 86/154 (55%), Gaps = 15/154 (9%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N H+ S + P +A+ G G + +LKL+AD+G++G PNAGKST L S+T ++ +I Sbjct: 265 NPHWVSRSITRPKFASRGEGGMRLELEFELKLLADVGLVGKPNAGKSTLLRSLTNSRTRI 324 Query: 187 ADYPFTTLYPNLG-IVKEGYK--------------EFILADIPGIIKNAHQGAGIGDRFL 231 ++ FTTL PN+G +V + YK F +ADIPG+I++AH G+G FL Sbjct: 325 GNWEFTTLSPNIGTVVIDDYKGRPLVESKGKAPRTNFTIADIPGLIEDAHLDKGLGLGFL 384 Query: 232 KHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 +H ER +L +V + Q + EL Y Sbjct: 385 RHIERAGILAFVVDLSAGDPIEGLQKLWRELREY 418 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/105 (40%), Positives = 62/105 (59%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+ + I +G GG G +SF REK++E G P+GG GG GG ++IQA L +L + Sbjct: 70 FQDKCRSVIYAGSGGNGCVSFLREKYVEEGPPNGGDGGSGGSIYIQAVEGLTSLHKLARR 129 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICD 107 KA G+ G +++ G +G DV++ VPVGT V E D + + Sbjct: 130 GIIKAGRGKNGQGKSKGGKRGNDVLIQVPVGTVVREVDRYDPVAE 174 >gi|169767298|ref|XP_001818120.1| GTP-binding protein Obg [Aspergillus oryzae RIB40] gi|238484149|ref|XP_002373313.1| GTP-binding protein Obg [Aspergillus flavus NRRL3357] gi|83765975|dbj|BAE56118.1| unnamed protein product [Aspergillus oryzae] gi|220701363|gb|EED57701.1| GTP-binding protein Obg [Aspergillus flavus NRRL3357] Length = 550 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/154 (36%), Positives = 83/154 (53%), Gaps = 15/154 (9%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N H+ S + P +A+ G G + +LKL+AD+G++G PNAGKST L S+T ++ +I Sbjct: 272 NPHWVSRSINRPKFASRGEGGMRLELEFELKLLADVGLVGKPNAGKSTLLRSLTNSRTRI 331 Query: 187 ADYPFTTLYPNLGIV---------------KEGYKEFILADIPGIIKNAHQGAGIGDRFL 231 ++ FTTL PN+G V K F +ADIPG+I+NAH G+G FL Sbjct: 332 GNWEFTTLSPNIGTVVIDDFKGRPLVESKGKTPRTNFTIADIPGLIENAHLDRGLGLGFL 391 Query: 232 KHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 +H ER +L +V + + + EL Y Sbjct: 392 RHIERAGILAFVVDLSAGDPIQGLKNLWHELGEY 425 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/96 (42%), Positives = 60/96 (62%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+ + I +G GG G +SF REK++E G P+GG GG GG ++IQA + +L + Sbjct: 76 FQDKCRSVIYAGAGGNGCVSFLREKYVEEGPPNGGDGGSGGSIYIQAIEGITSLHKLARR 135 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 KA G+ G +++ G +GED++L VPVGT V E Sbjct: 136 GVIKAGRGKNGQGKSKGGRRGEDILLQVPVGTVVRE 171 >gi|330721576|gb|EGG99605.1| GTP-binding protein Obg [gamma proteobacterium IMCC2047] Length = 214 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 44/103 (42%), Positives = 69/103 (66%), Gaps = 4/103 (3%) Query: 186 IADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 +A+YPFTTL PNLG+V ++ F++ADIPGII+ A +GAG+G +FLKH RT +LLHIV Sbjct: 1 MANYPFTTLVPNLGVVSLSKHRSFVIADIPGIIEGAAEGAGLGFQFLKHVSRTRLLLHIV 60 Query: 245 SAL---EENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 + + + +CI +E+ ++ L K+ + L+++D V Sbjct: 61 DMAPYDDTDPADSVRCISEEMEKFSPTLAKRDRWLVLNKLDMV 103 >gi|255004257|ref|ZP_05279058.1| GTPase ObgE [Anaplasma marginale str. Virginia] Length = 95 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/95 (56%), Positives = 72/95 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DEAK++++ G GG G +SFRREKFIEFGGPDGG+GG GG V A+S +NTL+ FR Sbjct: 1 MSFVDEAKIHVKGGKGGDGCVSFRREKFIEFGGPDGGNGGNGGSVIFIASSAVNTLLYFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQ 95 Y QH +A++G+ G + + GA G + V+ VPVGTQ Sbjct: 61 YNQHIRAENGKAGSGKGKFGAAGRNRVVEVPVGTQ 95 >gi|289618215|emb|CBI54939.1| unnamed protein product [Sordaria macrospora] Length = 584 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 36/220 (16%) Query: 90 VPVGTQVFEEDGISLICDLDQEGQR-IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQ 148 +P ++F++ + DL++ R ++LA GG GG GN HF + P +A G Sbjct: 242 LPRRDRLFQQPAAPIYLDLNRPTPRPVLLAAGGLGGLGNPHFANKDRPRPMFATKGEPAM 301 Query: 149 EKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------- 201 I L+LKL+AD+G++GLPNAGKST L ++T ++ ++ + FTTL PN+G V Sbjct: 302 SLEIELELKLLADVGLVGLPNAGKSTLLRALTNSRARVGHWAFTTLQPNIGTVVLDNNKG 361 Query: 202 ---------------------------KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 E F +ADIPG+I+ AH G+G FL+H Sbjct: 362 RPSVKSFKRISDAPVDDPFALTGAPDEVEQRTRFTVADIPGLIEGAHLDKGLGIAFLRHV 421 Query: 235 ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 ER VL ++ N A + + +E+ Y +++R+ E Sbjct: 422 ERAGVLAFVIDLGAGNAVKALKALWNEVGLY-AQMREDEE 460 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/92 (45%), Positives = 58/92 (63%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+AK+ + +G GG G ISF RE FI G +GG GG GG+V+IQA +L + Sbjct: 75 FADKAKLNVYAGPGGNGCISFLRELFIPEGPANGGDGGHGGNVYIQAVHGETSLHKLARR 134 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGT 94 +H +A G+ G + G +GEDV++TVPVGT Sbjct: 135 RHIRAGRGKHGQGSAQGGQRGEDVIITVPVGT 166 >gi|265991873|ref|ZP_06104430.1| GTPase ObgE [Brucella melitensis bv. 1 str. Rev.1] gi|263002829|gb|EEZ15232.1| GTPase ObgE [Brucella melitensis bv. 1 str. Rev.1] Length = 118 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 52/109 (47%), Positives = 62/109 (56%) Query: 225 GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTV 284 G+GDRFL H ERT VLLH+VSA EE+V AYQ I EL AY L K EIV LSQ+DT+ Sbjct: 2 GLGDRFLGHVERTRVLLHLVSAQEEDVAKAYQVIRGELEAYEHGLADKPEIVALSQVDTL 61 Query: 285 DSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 D +T K L CG P S+++ G+ L L I R E Sbjct: 62 DPETRKAKVKALKKACGCEPLLLSAVSHEGLNDTLRQLARIIDLSRAEE 110 >gi|85105966|ref|XP_962073.1| hypothetical protein NCU05302 [Neurospora crassa OR74A] gi|28923667|gb|EAA32837.1| conserved hypothetical protein [Neurospora crassa OR74A] Length = 591 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 72/220 (32%), Positives = 112/220 (50%), Gaps = 36/220 (16%) Query: 90 VPVGTQVFEEDGISLICDLDQEGQR-IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQ 148 +P ++F++ + DL++ R I+LA GG GG GN HF + P +A G Sbjct: 250 LPRRDRLFQQPPAPIYLDLNRPTPRPILLAAGGLGGLGNPHFANKERPRPMFATKGEPAM 309 Query: 149 EKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------- 201 I L+LKL+AD+G++GLPNAGKST L ++T ++ ++ + FTTL PN+G V Sbjct: 310 SLEIELELKLLADVGLVGLPNAGKSTLLRALTNSRARVGHWAFTTLQPNIGTVVLDNNKG 369 Query: 202 ---KEGYK------------------------EFILADIPGIIKNAHQGAGIGDRFLKHT 234 + YK F +ADIPG+I+ AH G+G FL+H Sbjct: 370 RPSVKSYKRISDAPVDDPFALTGAPDEVEQRTRFTVADIPGLIEGAHLDKGLGIAFLRHV 429 Query: 235 ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 ER VL ++ N A + + +E+ Y +++R+ E Sbjct: 430 ERAGVLAFVIDLGAGNAVKALKALWNEVGLY-AQMREDEE 468 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/115 (42%), Positives = 69/115 (60%), Gaps = 6/115 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+AK+++ +G GG G ISF RE FI G +GG GG GG+V+IQA +L + Sbjct: 75 FADKAKLHVYAGPGGNGCISFLRELFIPEGPANGGDGGHGGNVYIQAVHGETSLHKLARR 134 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIIL 117 +H +A G+ G + G +GEDV++TVPVGT V E I D EG+R ++ Sbjct: 135 RHIRAGRGKHGQGSAQGGQRGEDVIITVPVGTVVSE------ISRDDPEGERQLI 183 >gi|268561734|ref|XP_002646515.1| Hypothetical protein CBG20352 [Caenorhabditis briggsae] Length = 263 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 72/119 (60%), Gaps = 1/119 (0%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQG 223 + L N ++ L +++RAKPK+A YPFTTL P++G+V E +++ +ADIPG+I++AH Sbjct: 100 MALNNTRVNSLLRAISRAKPKVASYPFTTLRPHIGVVFYEDFEQIAVADIPGLIEDAHLN 159 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 G+G FLKH ER L +++ + Y+ + EL Y L + + +++ID Sbjct: 160 KGLGISFLKHIERCQSLWYVLDYSSGQLAEQYKQLRFELEGYQKGLGDRATTIVINKID 218 >gi|121700883|ref|XP_001268706.1| GTP-binding protein Obg [Aspergillus clavatus NRRL 1] gi|119396849|gb|EAW07280.1| GTP-binding protein Obg [Aspergillus clavatus NRRL 1] Length = 566 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 73/227 (32%), Positives = 109/227 (48%), Gaps = 28/227 (12%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N H+ S + P +A+ G G + +LKL+AD+G++G PNAGKST L S+T ++ +I Sbjct: 276 NPHWVSRSIGRPKFASRGEGGMRLELEFELKLLADVGLVGKPNAGKSTLLRSLTNSRTRI 335 Query: 187 ADYPFTTLYPNLGIV---------------KEGYKEFILADIPGIIKNAHQGAGIGDRFL 231 ++ FTTL PN+G V K F +ADIPG+I+ AH G+G FL Sbjct: 336 GNWEFTTLSPNIGTVVIDDHKGRPLVESRGKVRRTNFTIADIPGLIEGAHLDRGLGLGFL 395 Query: 232 KHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 +H ER +L +V + + + EL Y E + IE+ + D S L Sbjct: 396 RHIERAGILAFVVDLSAGDPVQGLRNLWHELGEY--ERVRNIELASEGEEDPF-SWKLGE 452 Query: 292 KKNELATQCGQ--------VPFEFSSITGHGIPQI-LECLHDKIFSI 329 EL Q G P EF S + +P + L +H K + + Sbjct: 453 GLPELRAQNGLEDSDSPFGTPTEFPS-SSKELPSLELPPIHTKPWFV 498 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/96 (42%), Positives = 61/96 (63%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+ + + +G GG+G +SF REK++E G P+GG GG GG ++IQA + +L + Sbjct: 84 FQDKCRSTLYAGSGGSGCVSFLREKYVEEGPPNGGDGGSGGGIYIQAVEGITSLHKLARR 143 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 KA+ G G +++ G +GEDV+L VPVGT V E Sbjct: 144 GVIKAERGRNGQGKSKGGRRGEDVLLQVPVGTVVRE 179 >gi|256071587|ref|XP_002572121.1| developmentally regulated GTP-binding protein-related [Schistosoma mansoni] gi|238657273|emb|CAZ28351.1| developmentally regulated GTP-binding protein-related [Schistosoma mansoni] Length = 356 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 91/359 (25%), Positives = 147/359 (40%), Gaps = 105/359 (29%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSN--LNTLIDFR 60 F+D+ ++++R+G G AG P G GG GG V+++A N L L Sbjct: 14 FIDKLRIFVRAGSGAAGS------------PPIKGRGGNGGSVFLEAGENETLQKLFMAN 61 Query: 61 YQQHFKAQHGEKGMKRN--RSGAKGEDVVLTVPVG-TQVFEEDGIS--------LICDLD 109 + F A HG + KR G G+D+ + VP G T +F G S ++ +LD Sbjct: 62 PTKRFAAGHGTEASKRRGLVVGLDGQDLTIRVPAGITVLFGGQGTSSANGSEQRILGNLD 121 Query: 110 QEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPN 169 + GQ++++A GG GGF Sbjct: 122 KVGQKLLVAQGGVGGFH------------------------------------------- 138 Query: 170 AGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGD 228 ++ L +++ A KIA+YPFTT+ P + + ++E +AD+PG Sbjct: 139 --QNGLLKALSGAPAKIANYPFTTIKPQVAKCIYSDHREISIADLPGFSNFPRH-----T 191 Query: 229 RFLKHTERTHVLLHIVSAL---------EENVQAAYQCILDELSAY-NSELRKKIEIVGL 278 RFLKH ER+ +L ++ +L + N A IL+++ + N L +K L Sbjct: 192 RFLKHVERSSCILLVLDSLGFCKDQLSPKRNALAVAYLILNQMERWSNGLLLEKPMACIL 251 Query: 279 SQIDTVDSDT--------LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 +++DT + L R + A Q Q+P P++L L K SI Sbjct: 252 NKVDTTGAMDEALETKYWLERMDSSEAKQYSQLP-----------PKLLPSLTPKFESI 299 >gi|294950261|ref|XP_002786541.1| hypothetical protein Pmar_PMAR005247 [Perkinsus marinus ATCC 50983] gi|239900833|gb|EER18337.1| hypothetical protein Pmar_PMAR005247 [Perkinsus marinus ATCC 50983] Length = 1530 Score = 86.3 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 129/260 (49%), Gaps = 32/260 (12%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V +R+G GG +R +G G GG GG V+I+ T +++L+ + + Sbjct: 1103 FIDRMWVNVRAGRGGDPKPKTKRT----YGFKGPGYGGHGGHVFIRCTDQIDSLLSVKQE 1158 Query: 63 QHFKAQHGEKGMKRNR--SGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQR------ 114 H A++G G + N G G+D + VP GT V E D ++ R Sbjct: 1159 VH--AKNGGNGGEVNPYGRGIHGDDCTIYVPPGTIVRERIKTGHKSDANRSVHRSRFLYQ 1216 Query: 115 -------IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGL 167 I + GG GG G + FK + G G+ K + L+L+++ D+ ++G Sbjct: 1217 FLADKEMIRICRGGKGGVGYSSFKKHDGRM------GAPGEGKKLELELRVLTDVALLGK 1270 Query: 168 PNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI---LADIPGIIKNAHQGA 224 PN+GKS+ +SV R +I ++T+ P+ G+++ +++ + + D+PGI + A + Sbjct: 1271 PNSGKSSIASSVCRMMTRIGPEEYSTIRPHTGVIR--FRDGVNIKITDLPGISEGAAEDR 1328 Query: 225 GIGDRFLKHTERTHVLLHIV 244 G R L+H R +L++++ Sbjct: 1329 LRGLRVLRHMYRARLLVYVI 1348 >gi|39975987|ref|XP_369384.1| hypothetical protein MGG_06080 [Magnaporthe oryzae 70-15] gi|145011629|gb|EDJ96285.1| hypothetical protein MGG_06080 [Magnaporthe oryzae 70-15] Length = 580 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 72/225 (32%), Positives = 111/225 (49%), Gaps = 36/225 (16%) Query: 77 NRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQR-IILAPGGNGGFGNAHFKSSTN 135 N + K D+ L +P T+ + + ++ DL Q +R I+LA GG GG GN HF S Sbjct: 226 NTTERKNLDLPLRLPKRTRYYSQPAAPVLLDLSQPTRRPILLAAGGIGGLGNPHFLSRER 285 Query: 136 QAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLY 195 P +A G + L+LKL+AD+G++GLPNAGKST + +++ ++ ++ + FTTL Sbjct: 286 PKPMFATKGERPMSMKLELELKLLADVGLVGLPNAGKSTLVRALSNSRARVGAWAFTTLK 345 Query: 196 PNLG-IVKEGYK----------------------------------EFILADIPGIIKNA 220 PN+G +V + K F +ADIPG+I+ A Sbjct: 346 PNIGTVVLDNNKGKPLVRSVRRVPRHSEDMPYGAAGEDDTEVVPRTRFTVADIPGLIEGA 405 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 H G+G FL+H ER VL ++ N A + + E+ Y Sbjct: 406 HLDKGLGMAFLRHVERAGVLAFVLDLSAGNAVKALKALWHEVGQY 450 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 49/115 (42%), Positives = 69/115 (60%), Gaps = 6/115 (5%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+AK+ I +G GG G ISF RE ++E G P+GG GG GG+V+IQA +L + Sbjct: 66 FSDKAKITITAGAGGNGCISFLREAYVEEGPPNGGDGGHGGNVYIQAVHGQTSLHKLARK 125 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIIL 117 + +A G+ G +++G KG+DVV+ VPVGT V E I LD E + +L Sbjct: 126 RSIRAAPGKHGQGSSKTGQKGDDVVIQVPVGTIVRE------ISRLDPETEDRML 174 >gi|302795336|ref|XP_002979431.1| hypothetical protein SELMODRAFT_419128 [Selaginella moellendorffii] gi|300152679|gb|EFJ19320.1| hypothetical protein SELMODRAFT_419128 [Selaginella moellendorffii] Length = 284 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 37/67 (55%), Positives = 55/67 (82%), Gaps = 1/67 (1%) Query: 154 LKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK-EFILAD 212 L+LKL+AD+GIIG+PNAGKST L++++ A+P IA YPFTTL PNLG+V + ++AD Sbjct: 78 LELKLVADVGIIGVPNAGKSTLLSAISAARPAIAAYPFTTLLPNLGVVSLDFDATMVIAD 137 Query: 213 IPGIIKN 219 +PG++++ Sbjct: 138 LPGLLED 144 >gi|221486943|gb|EEE25189.1| GTP-binding protein, putative [Toxoplasma gondii GT1] Length = 713 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 28/183 (15%) Query: 80 GAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQR----------------IILAPGGNG 123 G +D ++ VP+GT V + L EG+R + +A GG G Sbjct: 290 GLHAKDRIVKVPLGTIVRKRVATG---RLSPEGRRYKQSLFWFQFLFNKQSLAVAAGGRG 346 Query: 124 GFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAK 183 G + FK + P G+ + L+L+L+ D+ ++G PN+GK++F A+VTR + Sbjct: 347 GLAPSSFKKKDGRLPEP------GERTFLELELRLLNDVALVGAPNSGKTSFAAAVTRYQ 400 Query: 184 PKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KI T P++G ++ +G EF L D+P + AHQ G R L+H R+ +L+ Sbjct: 401 SKIGSESMQTRRPHIGTLRYVDGV-EFKLMDLPAVCPGAHQDKSRGMRILRHLYRSRLLV 459 Query: 242 HIV 244 +++ Sbjct: 460 YVL 462 >gi|221506630|gb|EEE32247.1| GTP-binding protein, putative [Toxoplasma gondii VEG] Length = 713 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 28/183 (15%) Query: 80 GAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQR----------------IILAPGGNG 123 G +D ++ VP+GT V + L EG+R + +A GG G Sbjct: 290 GLHAKDRIVKVPLGTIVRKRVATG---RLSPEGRRYKQSLFWFQFLFNKQSLAVAAGGRG 346 Query: 124 GFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAK 183 G + FK + P G+ + L+L+L+ D+ ++G PN+GK++F A+VTR + Sbjct: 347 GLAPSSFKKKDGRLPEP------GERTFLELELRLLNDVALVGAPNSGKTSFAAAVTRYQ 400 Query: 184 PKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KI T P++G ++ +G EF L D+P + AHQ G R L+H R+ +L+ Sbjct: 401 SKIGSESMQTRRPHIGTLRYVDGV-EFKLMDLPAVCPGAHQDKSRGMRILRHLYRSRLLV 459 Query: 242 HIV 244 +++ Sbjct: 460 YVL 462 >gi|237831823|ref|XP_002365209.1| GTP-binding protein, putative [Toxoplasma gondii ME49] gi|211962873|gb|EEA98068.1| GTP-binding protein, putative [Toxoplasma gondii ME49] Length = 713 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 28/183 (15%) Query: 80 GAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQR----------------IILAPGGNG 123 G +D ++ VP+GT V + L EG+R + +A GG G Sbjct: 290 GLHAKDRIVKVPLGTIVRKRVATG---RLSPEGRRYKQSLFWFQFLFNKQSLAVAAGGRG 346 Query: 124 GFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAK 183 G + FK + P G+ + L+L+L+ D+ ++G PN+GK++F A+VTR + Sbjct: 347 GLAPSSFKKKDGRLPEP------GERTFLELELRLLNDVALVGAPNSGKTSFAAAVTRYQ 400 Query: 184 PKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL 241 KI T P++G ++ +G EF L D+P + AHQ G R L+H R+ +L+ Sbjct: 401 SKIGSESMQTRRPHIGTLRYVDGV-EFKLMDLPAVCPGAHQDKSRGMRILRHLYRSRLLV 459 Query: 242 HIV 244 +++ Sbjct: 460 YVL 462 >gi|246771698|gb|ACS94975.1| OBG family small GTPase [Sporothrix schenckii] Length = 651 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 78/181 (43%), Gaps = 42/181 (23%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 N F S P A G I L+LKL+AD+G++GLPNAGKST L +V+ ++ ++ Sbjct: 343 NPRFVSRRLPRPMVATRGENAVSLTIHLELKLLADVGLVGLPNAGKSTLLRAVSNSRARV 402 Query: 187 ADYPFTTLYPNLGIV------------------------------------------KEG 204 + FTTL PN+G V Sbjct: 403 GSWAFTTLQPNIGTVVLDNNRGRPVVSMRPTKKKAVTSTADGEIHTVAGDEANATVAVPP 462 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 F +ADIPG+I+ AH G+G FL+H ER VL +V + A + + E+ Sbjct: 463 RTRFTIADIPGLIEGAHLDKGLGIEFLRHVERAGVLAFVVDLGAGDAVTALKALWKEVGL 522 Query: 265 Y 265 Y Sbjct: 523 Y 523 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 52/86 (60%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+A + + +G GGAG ISF R+ F+ G +GG GG GG+V+IQA +L + Sbjct: 104 FADKATLTVHAGSGGAGCISFLRDMFLPDGPANGGDGGHGGNVYIQAVPGETSLHKIARR 163 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVL 88 + +A G+ G R+G +G+D+++ Sbjct: 164 RVMRAGRGKHGQGSARNGPRGDDLIV 189 >gi|309356281|emb|CAP37386.2| hypothetical protein CBG_20352 [Caenorhabditis briggsae AF16] Length = 200 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 68/110 (61%), Gaps = 1/110 (0%) Query: 174 TFLASVTRAKPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNAHQGAGIGDRFLK 232 + L +++RAKPK+A YPFTTL P++G+V E +++ +ADIPG+I++AH G+G FLK Sbjct: 46 SLLRAISRAKPKVASYPFTTLRPHIGVVFYEDFEQIAVADIPGLIEDAHLNKGLGISFLK 105 Query: 233 HTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 H ER L +++ + Y+ + EL Y L + + +++ID Sbjct: 106 HIERCQSLWYVLDYSSGQLAEQYKQLRFELEGYQKGLGDRATTIVINKID 155 >gi|187918107|ref|YP_001883670.1| GTP-dependent nucleic acid-binding protein EngD [Borrelia hermsii DAH] gi|119860955|gb|AAX16750.1| GTP-binding protein [Borrelia hermsii DAH] Length = 368 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 31/156 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 ++GI+GLPN GKST +S+T +K +IA+YPF T+ PN+GIV+ Sbjct: 4 NVGIVGLPNVGKSTLFSSLTASKSEIANYPFCTIDPNIGIVEIPDFRLSEIASLVMSKKT 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD- 260 EF+ DI G++K A +G G+G++FL + +++H++ E+ ++ Sbjct: 64 VPAVMEFV--DIAGLVKGASRGEGLGNKFLANIREVSIIVHVIRCFEDREVIHVDGDVNP 121 Query: 261 --ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 ++S N+EL L+ +DTV L +KN Sbjct: 122 QRDISTINTEL-------CLADLDTVQKSILKNEKN 150 >gi|119953031|ref|YP_945240.1| GTP-dependent nucleic acid-binding protein EngD [Borrelia turicatae 91E135] gi|119861802|gb|AAX17570.1| GTP-binding protein [Borrelia turicatae 91E135] Length = 368 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 82/156 (52%), Gaps = 31/156 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 ++GI+GLPN GKST +S+T +K +IA+YPF T+ PN+GIV+ Sbjct: 4 NVGIVGLPNVGKSTLFSSLTASKSEIANYPFCTIDPNIGIVEIPDERLSRIASLVVSKKT 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD- 260 EF+ DI G++K A +G G+G++FL + +++H+V E+ ++ Sbjct: 64 VPAVIEFV--DIAGLVKGASRGEGLGNKFLANIREVSIIVHVVRCFEDREVIHVDGDVNP 121 Query: 261 --ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 ++S N+EL L+ +DTV L +KN Sbjct: 122 QRDISTINTEL-------CLADLDTVQKSILKNEKN 150 >gi|221101430|ref|XP_002158493.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 371 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 92/163 (56%), Gaps = 3/163 (1%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 KF+D ++Y+++G+GG G SF K GGP+GG GGRGG V + A S+ L + Sbjct: 212 KFIDWKRLYLKAGNGGKGSNSFVHSK-DHRGGPNGGDGGRGGSVIVVADSSFTQLAHLKS 270 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGG 121 H A+ G G RN G G+D+ + VP G+ + + ++I DL ++G +A GG Sbjct: 271 AYH--AECGRNGSGRNMHGRNGDDLFIKVPQGSLILKAGTSNIIADLLKDGDSATVAYGG 328 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 GG GN HFKS N P G LG E I ++LK IAD+G+ Sbjct: 329 YGGKGNVHFKSPLNVRPREFTEGSLGDELYIDVELKSIADVGL 371 >gi|42524125|ref|NP_969505.1| translation-associated GTPase [Bdellovibrio bacteriovorus HD100] gi|39576333|emb|CAE80498.1| GTP-binding protein [Bdellovibrio bacteriovorus HD100] Length = 366 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------ 209 +GI+GLPN GKST ++T AK + A+YPF T+ PN+G+V + EFI Sbjct: 5 VGIVGLPNVGKSTLFNALTSAKAEAANYPFCTIDPNVGVVTVPDPRMDKITEFIKPQKVV 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI+K A QG G+G++FL H +T ++H+V ++ Sbjct: 65 PTTMEFVDIAGIVKGASQGEGLGNQFLSHIRQTDAIVHVVRCFDD 109 >gi|71892122|ref|YP_277854.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796228|gb|AAZ40979.1| putative GTP-binding protein with nucleoside triP hydrolase domain [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 358 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 21/109 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 D GIIGLPN GKST + +T A KI+++PF T++PN+ +V+ Sbjct: 4 DCGIIGLPNVGKSTVFSVLTNAPVKISNFPFCTIHPNISVVRIPDPRVYQLAGIVASRET 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 G +F+ DI G+IK A QG G+G + L H + T VL H+V ++N Sbjct: 64 VHGKIKFV--DIAGLIKGAAQGIGLGSKILNHIQTTKVLCHVVRCFDDN 110 >gi|91203876|emb|CAJ71529.1| strongly similar to GTP-binding protein [Candidatus Kuenenia stuttgartiensis] Length = 362 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 34/191 (17%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T AK A+YPF T+ PN+G+V + E I Sbjct: 4 NCGIVGLPNVGKSTIFNALTSAKAASANYPFCTIDPNVGVVSVPDIRMDKIAEIISTEKI 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCIL 259 DI G++K A +G G+G++FL H + + LLH+V E++ V+ + Sbjct: 64 VPTIVEFVDIAGLVKGASKGEGLGNQFLGHIKNVNALLHVVRCFEKSDTIHVEGSVHPER 123 Query: 260 DELSAYNSELRKKIEIVGLSQIDTVD-----SDTLARKKNELATQCGQVPFEFSSITGHG 314 D + N+EL L+ I+TVD S+ LA+ ++ V + + +G Sbjct: 124 D-IDIINTELI-------LADIETVDKRLNRSEKLAKTGDKKNLATIDVLKKVKNALNNG 175 Query: 315 IPQILECLHDK 325 +P L CL D+ Sbjct: 176 VPVRLLCLTDE 186 >gi|203287692|ref|YP_002222707.1| conserved hypothetical GTP-binding protein [Borrelia recurrentis A1] gi|201084912|gb|ACH94486.1| conserved hypothetical GTP-binding protein [Borrelia recurrentis A1] Length = 368 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 33/195 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI----------- 209 ++GI+GLPN GKST +S+T +K +IA+YPF T+ PN+GIV+ + + Sbjct: 4 NVGIVGLPNVGKSTLFSSLTASKSEIANYPFCTIDPNVGIVEVPDERLLKIANLVSSKKI 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD--- 260 DI G+++ A +G G+G++FL + +++H+V + +D Sbjct: 64 IPAVIEFVDIAGLVREAFKGEGLGNKFLANIREVSIIVHVVRCFNDREVIHIDGDIDPQR 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++S N+EL L+ ++TV L +KN A + E S I I +L Sbjct: 124 DISTINTEL-------CLADLETVQKSILKNEKN--AKSIDKNISENSKI----IVSLLR 170 Query: 321 CLHDKIFSIRGENEF 335 L + +R +EF Sbjct: 171 DLEKHLIDVRPASEF 185 >gi|323340447|ref|ZP_08080703.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus ruminis ATCC 25644] gi|323092136|gb|EFZ34752.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus ruminis ATCC 25644] Length = 367 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 71/127 (55%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDARLARIDEIIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL++ + ++H+V A +EN+ + LD++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQVDAIVHVVRAFDDENITHVSNKVDPLDDI 125 Query: 263 SAYNSEL 269 N EL Sbjct: 126 DTINMEL 132 >gi|329920845|ref|ZP_08277432.1| GTP-binding protein YchF [Lactobacillus iners SPIN 1401G] gi|328935625|gb|EGG32092.1| GTP-binding protein YchF [Lactobacillus iners SPIN 1401G] Length = 366 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDKRLARIQELIPAKKVVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V A E++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFEDD 110 >gi|309808162|ref|ZP_07702072.1| GTP-binding protein YchF [Lactobacillus iners LactinV 01V1-a] gi|308168543|gb|EFO70651.1| GTP-binding protein YchF [Lactobacillus iners LactinV 01V1-a] Length = 347 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDKRLARIQELIPAKKVVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V A E++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFEDD 110 >gi|148543348|ref|YP_001270718.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus reuteri DSM 20016] gi|184152758|ref|YP_001841099.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus reuteri JCM 1112] gi|227364422|ref|ZP_03848512.1| GTP-binding translation factor YchF [Lactobacillus reuteri MM2-3] gi|325683621|ref|ZP_08163137.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus reuteri MM4-1A] gi|148530382|gb|ABQ82381.1| GTP-binding protein YchF [Lactobacillus reuteri DSM 20016] gi|183224102|dbj|BAG24619.1| GTP-binding protein [Lactobacillus reuteri JCM 1112] gi|227070515|gb|EEI08848.1| GTP-binding translation factor YchF [Lactobacillus reuteri MM2-3] gi|324977971|gb|EGC14922.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus reuteri MM4-1A] Length = 365 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 66/105 (62%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFILA----- 211 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V+ + +E I A Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDSRLDRIQELIPAKKIVP 65 Query: 212 ------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL++ +T ++H+V A ++N Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDN 110 >gi|259501226|ref|ZP_05744128.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus iners DSM 13335] gi|302191034|ref|ZP_07267288.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus iners AB-1] gi|309803330|ref|ZP_07697425.1| GTP-binding protein YchF [Lactobacillus iners LactinV 11V1-d] gi|309808976|ref|ZP_07702850.1| GTP-binding protein YchF [Lactobacillus iners SPIN 2503V10-D] gi|312871087|ref|ZP_07731189.1| GTP-binding protein YchF [Lactobacillus iners LEAF 3008A-a] gi|312872097|ref|ZP_07732172.1| GTP-binding protein YchF [Lactobacillus iners LEAF 2062A-h1] gi|312873497|ref|ZP_07733547.1| GTP-binding protein YchF [Lactobacillus iners LEAF 2052A-d] gi|312875280|ref|ZP_07735288.1| GTP-binding protein YchF [Lactobacillus iners LEAF 2053A-b] gi|315653258|ref|ZP_07906181.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus iners ATCC 55195] gi|325911331|ref|ZP_08173744.1| GTP-binding protein YchF [Lactobacillus iners UPII 143-D] gi|325913557|ref|ZP_08175922.1| GTP-binding protein YchF [Lactobacillus iners UPII 60-B] gi|259167353|gb|EEW51848.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus iners DSM 13335] gi|308164494|gb|EFO66746.1| GTP-binding protein YchF [Lactobacillus iners LactinV 11V1-d] gi|308170632|gb|EFO72651.1| GTP-binding protein YchF [Lactobacillus iners SPIN 2503V10-D] gi|311089114|gb|EFQ47550.1| GTP-binding protein YchF [Lactobacillus iners LEAF 2053A-b] gi|311091006|gb|EFQ49400.1| GTP-binding protein YchF [Lactobacillus iners LEAF 2052A-d] gi|311092390|gb|EFQ50759.1| GTP-binding protein YchF [Lactobacillus iners LEAF 2062A-h1] gi|311093415|gb|EFQ51757.1| GTP-binding protein YchF [Lactobacillus iners LEAF 3008A-a] gi|315489421|gb|EFU79060.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus iners ATCC 55195] gi|325476891|gb|EGC80044.1| GTP-binding protein YchF [Lactobacillus iners UPII 143-D] gi|325477136|gb|EGC80283.1| GTP-binding protein YchF [Lactobacillus iners UPII 60-B] Length = 366 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDKRLARIQELIPAKKVVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V A E++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFEDD 110 >gi|309806389|ref|ZP_07700401.1| GTP-binding protein YchF [Lactobacillus iners LactinV 03V1-b] gi|308167220|gb|EFO69387.1| GTP-binding protein YchF [Lactobacillus iners LactinV 03V1-b] Length = 342 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDKRLARIQELIPAKKVVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V A E++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFEDD 110 >gi|227543816|ref|ZP_03973865.1| GTP-binding translation factor YchF [Lactobacillus reuteri CF48-3A] gi|300908884|ref|ZP_07126347.1| GTP-binding protein YchF [Lactobacillus reuteri SD2112] gi|227186193|gb|EEI66264.1| GTP-binding translation factor YchF [Lactobacillus reuteri CF48-3A] gi|300894291|gb|EFK87649.1| GTP-binding protein YchF [Lactobacillus reuteri SD2112] Length = 365 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 66/105 (62%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFILA----- 211 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V+ + +E I A Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDSRLDRIQELIPAKKIVP 65 Query: 212 ------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL++ +T ++H+V A ++N Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDN 110 >gi|309805078|ref|ZP_07699131.1| GTP-binding protein YchF [Lactobacillus iners LactinV 09V1-c] gi|308165532|gb|EFO67762.1| GTP-binding protein YchF [Lactobacillus iners LactinV 09V1-c] Length = 343 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDKRLARIQELIPAKKVVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V A E++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFEDD 110 >gi|331700963|ref|YP_004397922.1| GTP-binding protein YchF [Lactobacillus buchneri NRRL B-30929] gi|329128306|gb|AEB72859.1| GTP-binding protein YchF [Lactobacillus buchneri NRRL B-30929] Length = 366 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 79/143 (55%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE--------------- 207 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V+ K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDKRLDRIQELIPAKKVVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL++ + ++H+V A ++N+ + LD++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQVDAIVHVVRAFDDDNITTVSGKVDPLDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N EL G++ +D+V+ Sbjct: 126 DTINLEL-------GIADLDSVN 141 >gi|81427635|ref|YP_394632.1| translation-associated GTPase [Lactobacillus sakei subsp. sakei 23K] gi|78609274|emb|CAI54321.1| Putative GTP-binding protein [Lactobacillus sakei subsp. sakei 23K] Length = 366 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 72/127 (56%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE--------------- 207 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V+ K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDKRLDRIQEIIPAKKIVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL++ + ++H+V A ++N+ + + LD++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQVDAIVHVVRAFDDDNITSVTGTVDPLDDI 125 Query: 263 SAYNSEL 269 N EL Sbjct: 126 DTINLEL 132 >gi|224532300|ref|ZP_03672932.1| GTP-binding protein YchF [Borrelia valaisiana VS116] gi|224511765|gb|EEF82171.1| GTP-binding protein YchF [Borrelia valaisiana VS116] Length = 368 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 37/161 (22%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST AS+T +K +IA+YPF T+ PN+GIV+ Sbjct: 6 GIVGLPNVGKSTLFASLTSSKVEIANYPFCTIEPNVGIVEIPDERLLKIAGCIVPQKIIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 EF+ DI G++K A G G+G++FL + +++H+V EE E+ Sbjct: 66 AVMEFV--DIAGLVKGASTGEGLGNKFLANIREVSLIVHVVRCFEEK----------EVI 113 Query: 264 AYNSELRKKIEI------VGLSQIDTVDSDTLARKKNELAT 298 N+E+ + +I + LS ++TV ++KN +T Sbjct: 114 HINNEINPEKDITTINIELCLSDLETVQKSLQKQEKNVKST 154 >gi|156097773|ref|XP_001614919.1| GTP-binding protein [Plasmodium vivax SaI-1] gi|148803793|gb|EDL45192.1| GTP-binding protein, putative [Plasmodium vivax] Length = 517 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 74/270 (27%), Positives = 131/270 (48%), Gaps = 37/270 (13%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F D V +SG GG RR + ++ G GG GG+V +++ ++ LI + Sbjct: 18 RFCDFLWVVAKSGKGGEPNYKRRRSRKLK----GEGYGGHGGNVILKSKKSIYDLI--KI 71 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQR------- 114 +Q KA GE K N G G D V+ VPVGT V + + C E R Sbjct: 72 EQKVKANDGE-NFKENSRGKDGSDKVIFVPVGTIVRKR----IYCKKKNENNRKVYKSIF 126 Query: 115 ----------IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 +++A GG GG + FK + P +G++ ++ L+L+L+ D+ Sbjct: 127 WYQFLKENEELLVARGGKGGISYSFFKKHDYRLPE------MGEKMLLELELRLLNDVAF 180 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQ 222 IG+ N+GK++ +S++R I+ + F+T P++ + +G E L D P + NAH+ Sbjct: 181 IGIENSGKTSLCSSLSRYYGNISSHMFSTTIPHVSNINYIDGV-EITLLDTPFLFHNAHR 239 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 G R L+H R+ ++++++ + ++ Sbjct: 240 DCSRGKRILRHLYRSKLIVYVIDVASDQLE 269 >gi|256848576|ref|ZP_05554017.1| translation-associated GTPase [Lactobacillus coleohominis 101-4-CHN] gi|256714628|gb|EEU29608.1| translation-associated GTPase [Lactobacillus coleohominis 101-4-CHN] Length = 365 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 65/105 (61%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFILA----- 211 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V+ + E I A Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDPRLDRINELIPAKKIVP 65 Query: 212 ------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL++ +T ++H+V A ++N Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDN 110 >gi|325969562|ref|YP_004245754.1| GTPase-like protein [Vulcanisaeta moutnovskia 768-28] gi|323708765|gb|ADY02252.1| GTPase-like protein [Vulcanisaeta moutnovskia 768-28] Length = 405 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 92/191 (48%), Gaps = 35/191 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------VKEGYKEF 208 IGI+G PN GKSTF A+ T KIA YPFTT+ PN+GI VK+ + Sbjct: 9 IGIVGKPNVGKSTFFAAATMIDVKIAPYPFTTIEPNVGIGYVRIPCVCRDLGVKDNPRNS 68 Query: 209 I-----------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS---ALEEN---V 251 I L D+ G++ A QG G+G++FL H R VL+H+V A +E V Sbjct: 69 ICIDGNRFIPVELIDVAGLVPGAWQGRGLGNQFLDHLRRAPVLIHVVDMAGATDEEGRLV 128 Query: 252 QAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSIT 311 + LD++ ++E+ + + Q+ + D D L R + +V ++ S Sbjct: 129 KPGTHDPLDDIEFLSNEV-----TMWMVQMLSKDWDKLVRLVDYAKKPLLEVLYDRFSGL 183 Query: 312 GHGIPQILECL 322 G PQI + L Sbjct: 184 GITQPQIGDAL 194 >gi|227529767|ref|ZP_03959816.1| GTP-binding translation factor YchF [Lactobacillus vaginalis ATCC 49540] gi|227350251|gb|EEJ40542.1| GTP-binding translation factor YchF [Lactobacillus vaginalis ATCC 49540] Length = 365 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 65/105 (61%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFILA----- 211 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V+ + E I A Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDSRLQRIDEIIPAKKIVP 65 Query: 212 ------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL++ +T ++H+V A ++N Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDN 110 >gi|194467508|ref|ZP_03073495.1| GTP-binding protein YchF [Lactobacillus reuteri 100-23] gi|194454544|gb|EDX43441.1| GTP-binding protein YchF [Lactobacillus reuteri 100-23] Length = 365 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 66/105 (62%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFILA----- 211 GI+GLPN GKST ++T+A ++++YPF T+ PN+G+V+ + +E I A Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMSNYPFATIDPNVGMVEVPDSRLDRIQELIPAKKIVP 65 Query: 212 ------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL++ +T ++H+V A ++N Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDN 110 >gi|207108404|ref|ZP_03242566.1| GTPase ObgE [Helicobacter pylori HPKX_438_CA4C1] Length = 123 Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 2/114 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D ++ I SG GG G +SFRREKF+ GGPDGG GG GGDV+ + +N +TL FR Sbjct: 2 FVDSVEIIIASGKGGPGMVSFRREKFVIKGGPDGGDGGDGGDVYFEVDNNTDTLASFRGT 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRII 116 +H KA++G G RN +G KGED ++ VP GTQVF D + L DL + +R++ Sbjct: 62 KHHKAKNGAPGGTRNCAGKKGEDKIIVVPPGTQVFVGDKLWL--DLVEPKKRVL 113 >gi|203284154|ref|YP_002221894.1| conserved hypothetical GTP-binding protein [Borrelia duttonii Ly] gi|201083597|gb|ACH93188.1| conserved hypothetical GTP-binding protein [Borrelia duttonii Ly] Length = 368 Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 27/154 (17%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 ++GI+GLPN GKST +S+T +K +IA+YPF T+ PN+GIV+ K+ Sbjct: 4 NVGIVGLPNVGKSTLFSSLTASKSEIANYPFCTIDPNVGIVEVPDARLLKIANLVSSKKI 63 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD--- 260 I A DI G+++ A +G G+G++FL + +++H+V + +D Sbjct: 64 IPAVIEFVDIAGLVRGASKGEGLGNKFLANIREVSIIVHVVRCFNDREVIHVDGDIDPQR 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 ++S N+EL L+ ++TV L +KN Sbjct: 124 DISTINTEL-------CLADLETVQKSILKNEKN 150 >gi|241895292|ref|ZP_04782588.1| GTP-binding translation factor YchF [Weissella paramesenteroides ATCC 33313] gi|241871598|gb|EER75349.1| GTP-binding translation factor YchF [Weissella paramesenteroides ATCC 33313] Length = 367 Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 66/105 (62%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFILA----- 211 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V+ + +E I A Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDDRLDRIQELIPADKVVP 65 Query: 212 ------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A QG G+G++FL++ + + ++H+V A +++ Sbjct: 66 TTFEFTDIAGIVKGASQGEGLGNKFLENIRQVNAIVHVVRAFDDD 110 >gi|312868936|ref|ZP_07729116.1| GTP-binding protein YchF [Lactobacillus oris PB013-T2-3] gi|311095500|gb|EFQ53764.1| GTP-binding protein YchF [Lactobacillus oris PB013-T2-3] Length = 365 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE--------------- 207 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V+ K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDKRLDRIQELIPAKKIVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL++ +T ++H+V A +++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDD 110 >gi|259502030|ref|ZP_05744932.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus antri DSM 16041] gi|259169994|gb|EEW54489.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus antri DSM 16041] Length = 365 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE--------------- 207 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V+ K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDKRLDRIQELIPAKKIVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL++ +T ++H+V A +++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDD 110 >gi|170016611|ref|YP_001727530.1| GTPase, translation factor [Leuconostoc citreum KM20] gi|169803468|gb|ACA82086.1| Predicted GTPase, probable translation factor [Leuconostoc citreum KM20] Length = 366 Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDDRLARIQELVPADKIIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A QG G+G++FL++ + + ++H+V A + +++ + LD++ Sbjct: 66 TTFEFTDIAGIVKGASQGEGLGNKFLENIRQVNAIIHVVRAFDGDDIIHVNGVVNPLDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL L+ ++TVD Sbjct: 126 DTINTELI-------LADLETVD 141 >gi|300173930|ref|YP_003773096.1| GTP-binding protein YchF [Leuconostoc gasicomitatum LMG 18811] gi|299888309|emb|CBL92277.1| GTP-binding protein YchF [Leuconostoc gasicomitatum LMG 18811] Length = 366 Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDDRLARIQEIEPADKIIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A QG G+G++FL++ + + ++H+V A + +++ + LD++ Sbjct: 66 TTFEFTDIAGIVKGASQGEGLGNKFLENIRQVNAIIHVVRAFDGDDIIHVNGVVDPLDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL L+ ++TVD Sbjct: 126 DTINTELI-------LADLETVD 141 >gi|300854238|ref|YP_003779222.1| putative GTP-binding protein [Clostridium ljungdahlii DSM 13528] gi|300434353|gb|ADK14120.1| predicted GTP-binding protein [Clostridium ljungdahlii DSM 13528] Length = 365 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K+ Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVSVPDKRLDVLEKMYNSKKKV 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y DI G++K A +G G+G++FL H ++H+V E++ Sbjct: 63 YTAIEFYDIAGLVKGASKGEGLGNKFLSHIREVEAIVHVVRCFEDD 108 >gi|167945175|ref|ZP_02532249.1| GTP1/OBG sub domain protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 169 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 88/149 (59%), Gaps = 9/149 (6%) Query: 193 TLYPNLGIVKEGY-KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SALEE 249 TLYPNLG+V + F++ADIPG+I+ A +GAG+G +FLKH RT +LLH+V + L+E Sbjct: 5 TLYPNLGVVSLARERSFVVADIPGVIEGAAEGAGLGIQFLKHLSRTRLLLHLVDMAPLDE 64 Query: 250 N---VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG-QVP- 304 + VQA + I EL+ Y+ EL + + L++ D + + + + + G Q P Sbjct: 65 SDDPVQAVRR-IEQELACYSDELAGRERWLVLNKRDLLSPEAYSERLTAIVDALGWQGPV 123 Query: 305 FEFSSITGHGIPQILECLHDKIFSIRGEN 333 + S+++G G Q++ L ++ ++ E Sbjct: 124 YGISAVSGEGAQQLVADLMARLEAVWQEE 152 >gi|255994513|ref|ZP_05427648.1| GTP-binding protein YchF [Eubacterium saphenum ATCC 49989] gi|255993226|gb|EEU03315.1| GTP-binding protein YchF [Eubacterium saphenum ATCC 49989] Length = 364 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 22/129 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 3 LGIVGLPNVGKSTLFNAITQAGAESANYPFCTIEPNVGMVTVPDYRIDKLSEIYKPKKTT 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 Y +DI G++K A +G G+G++FL H +LH+V E+ +V A I D Sbjct: 63 YATIKFSDIAGLVKGASKGEGLGNQFLGHIREAAAILHVVRCFEDPNIVHVHAGLDPI-D 121 Query: 261 ELSAYNSEL 269 ++ N+EL Sbjct: 122 DIEVINTEL 130 >gi|70948141|ref|XP_743618.1| GTP-binding protein [Plasmodium chabaudi chabaudi] gi|56523202|emb|CAH79333.1| GTP-binding protein, putative [Plasmodium chabaudi chabaudi] Length = 483 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 82/348 (23%), Positives = 159/348 (45%), Gaps = 65/348 (18%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F D + +SG GG +R + ++ G GG GG+V +++ ++ LI + Sbjct: 25 RFCDFLWITAKSGKGGNPNYKKQRSRKLKGEG----YGGHGGNVILKSKKSIYDLI--KI 78 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQR------- 114 +Q KA GE K N G G+D ++ VPVGT V + + C + R Sbjct: 79 EQKIKANDGE-DFKENSRGKDGKDKIIFVPVGTIVRKR----IYCQKKNQNNRKIYKSVF 133 Query: 115 ----------IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 +++A GG GG + FK + P L ++ ++ L+L+L+ D+ Sbjct: 134 WYQFLNENEELLVARGGKGGISYSLFKKHDFRLPE------LSEKILLELELRLMNDVAF 187 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQ 222 IG+ N+GK++ +S+++ I +TT P++ + +G E L D P + NAH+ Sbjct: 188 IGIENSGKTSLCSSLSKYYGNINSDIYTTTIPHVSNINYIDGV-EITLLDTPYLFYNAHK 246 Query: 223 GAGIGDRFLKHTERTHVLLHIVSAL--------EENVQAAYQCIL--------------- 259 G R L+H R+ ++++++ ++N++ Y L Sbjct: 247 DKARGKRILRHLYRSKLIIYVIDVSNDKLKNVDDQNIEDYYLASLKNENNPNKHNKIDPP 306 Query: 260 ----DELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQV 303 + L Y ++ K+I+++ +++ + D L +K+ +AT+C + Sbjct: 307 SIDDENLKEYYNDTIKQIKMLR-NELFLFNPDYLKKKELVVATKCDML 353 >gi|330718088|ref|ZP_08312688.1| GTPase, translation factor [Leuconostoc fallax KCTC 3537] Length = 367 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDARLARIQEMVPADKIIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCI---LDEL 262 F DI GI+K A QG G+G++FL + + + ++H+V A + + + LD++ Sbjct: 66 TTFEFTDIAGIVKGASQGEGLGNKFLDNIRQVNAIVHVVRAFDNDEIIHVNGVVNPLDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL L+ ++T+D Sbjct: 126 DTINTELI-------LADLETID 141 >gi|295693710|ref|YP_003602320.1| GTP-binding protein [Lactobacillus crispatus ST1] gi|295031816|emb|CBL51295.1| GTP-binding protein [Lactobacillus crispatus ST1] Length = 366 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDKRLARIQELIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V A +++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDD 110 >gi|58338072|ref|YP_194657.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus acidophilus NCFM] gi|227902750|ref|ZP_04020555.1| GTP-binding translation factor YchF [Lactobacillus acidophilus ATCC 4796] gi|58255389|gb|AAV43626.1| GTP-binding protein [Lactobacillus acidophilus NCFM] gi|227869413|gb|EEJ76834.1| GTP-binding translation factor YchF [Lactobacillus acidophilus ATCC 4796] Length = 366 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDKRLARIQELIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V A +++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDD 110 >gi|329668017|gb|AEB93965.1| putative GTP-binding protein [Lactobacillus johnsonii DPC 6026] Length = 366 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDSRLARIQELIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V A +++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDD 110 >gi|227879187|ref|ZP_03997059.1| GTP-binding translation factor YchF [Lactobacillus crispatus JV-V01] gi|256844012|ref|ZP_05549499.1| GTP-binding protein YchF [Lactobacillus crispatus 125-2-CHN] gi|256849425|ref|ZP_05554857.1| translation-associated GTPase [Lactobacillus crispatus MV-1A-US] gi|262046092|ref|ZP_06019055.1| GTP-binding protein YchF [Lactobacillus crispatus MV-3A-US] gi|293380695|ref|ZP_06626744.1| GTP-binding protein YchF [Lactobacillus crispatus 214-1] gi|312976914|ref|ZP_07788663.1| GTP-binding protein YchF [Lactobacillus crispatus CTV-05] gi|227861190|gb|EEJ68837.1| GTP-binding translation factor YchF [Lactobacillus crispatus JV-V01] gi|256613917|gb|EEU19119.1| GTP-binding protein YchF [Lactobacillus crispatus 125-2-CHN] gi|256713541|gb|EEU28530.1| translation-associated GTPase [Lactobacillus crispatus MV-1A-US] gi|260573422|gb|EEX29979.1| GTP-binding protein YchF [Lactobacillus crispatus MV-3A-US] gi|290922735|gb|EFD99688.1| GTP-binding protein YchF [Lactobacillus crispatus 214-1] gi|310896242|gb|EFQ45307.1| GTP-binding protein YchF [Lactobacillus crispatus CTV-05] Length = 366 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDKRLARIQELIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V A +++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDD 110 >gi|191637028|ref|YP_001986194.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus casei BL23] gi|227534577|ref|ZP_03964626.1| GTP-binding translation factor YchF [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631041|ref|ZP_04674072.1| translation-associated GTPase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301065362|ref|YP_003787385.1| putative GTPase, probable translation factor [Lactobacillus casei str. Zhang] gi|190711330|emb|CAQ65336.1| Predicted GTPase, probable translation factor [Lactobacillus casei BL23] gi|227187826|gb|EEI67893.1| GTP-binding translation factor YchF [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239527324|gb|EEQ66325.1| translation-associated GTPase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300437769|gb|ADK17535.1| Predicted GTPase, probable translation factor [Lactobacillus casei str. Zhang] gi|327381055|gb|AEA52531.1| hypothetical protein LC2W_0195 [Lactobacillus casei LC2W] gi|327384230|gb|AEA55704.1| hypothetical protein LCBD_0204 [Lactobacillus casei BD-II] Length = 368 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 73/127 (57%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE--------------- 207 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V+ K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDKRLARIDELIPAKKIIH 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL++ + ++H+V A ++N+ + + L+++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQVDAIVHVVRAFDDDNITSVTGKVDPLEDM 125 Query: 263 SAYNSEL 269 + N EL Sbjct: 126 ATINMEL 132 >gi|15639118|ref|NP_218564.1| GTP-dependent nucleic acid-binding protein EngD [Treponema pallidum subsp. pallidum str. Nichols] gi|189025358|ref|YP_001933130.1| GTP-dependent nucleic acid-binding protein EngD [Treponema pallidum subsp. pallidum SS14] gi|3322387|gb|AAC65113.1| conserved hypothetical GTP-binding protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189017933|gb|ACD70551.1| possible GTP-binding protein [Treponema pallidum subsp. pallidum SS14] gi|291059543|gb|ADD72278.1| GTP-binding protein YchF [Treponema pallidum subsp. pallidum str. Chicago] Length = 368 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 17/108 (15%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV---------------- 201 + + GIIGLPN GKST +++T + A+YPF T+ PN+G+V Sbjct: 1 MAVNCGIIGLPNVGKSTIFSALTANVVEAANYPFCTIEPNVGMVTVPDVRLEALAGHFRP 60 Query: 202 -KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 K Y DI G++K A QG G+G+RFL H VL H+V E Sbjct: 61 KKTVYASIECVDIAGLVKGASQGEGLGNRFLAHVREVGVLAHVVRCFE 108 >gi|161508047|ref|YP_001578014.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus helveticus DPC 4571] gi|260103051|ref|ZP_05753288.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus helveticus DSM 20075] gi|160349036|gb|ABX27710.1| GTP-binding protein [Lactobacillus helveticus DPC 4571] gi|260083141|gb|EEW67261.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus helveticus DSM 20075] gi|328464351|gb|EGF35763.1| GTP-binding protein YchF [Lactobacillus helveticus MTCC 5463] Length = 366 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDKRLARIQELIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V A +++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDD 110 >gi|254479533|ref|ZP_05092852.1| GTP-binding protein YchF [Carboxydibrachium pacificum DSM 12653] gi|214034535|gb|EEB75290.1| GTP-binding protein YchF [Carboxydibrachium pacificum DSM 12653] Length = 363 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 29/170 (17%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +IGI+GLPN GKST ++T+A + A+YPF T+ PN+GIV E ++ Sbjct: 2 EIGIVGLPNVGKSTLFNAITKAGAECANYPFCTIEPNVGIVSVPDERLDFLAKIENPQKV 61 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 + A DI G++K A +G G+G++FL H +L++V E++ + +D + Sbjct: 62 VPATIKFVDIAGLVKGASKGEGLGNKFLSHIREVDAILNVVRCFEDSNIVHVEGSIDPV- 120 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDTLAR---KKNELATQCGQVPFEFSSI 310 + +EI+ L I D +T+ R K ++LA + FE + Sbjct: 121 -------RDVEIINLELI-LADLETVERRMQKTSKLARNDKKAAFELEVL 162 >gi|199597917|ref|ZP_03211342.1| translation-associated GTPase [Lactobacillus rhamnosus HN001] gi|229550859|ref|ZP_04439584.1| GTP-binding translation factor YchF [Lactobacillus rhamnosus LMS2-1] gi|258538429|ref|YP_003172928.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus rhamnosus Lc 705] gi|199591174|gb|EDY99255.1| translation-associated GTPase [Lactobacillus rhamnosus HN001] gi|229315684|gb|EEN81657.1| GTP-binding translation factor YchF [Lactobacillus rhamnosus LMS2-1] gi|257150105|emb|CAR89077.1| GTP-binding protein YchF [Lactobacillus rhamnosus Lc 705] Length = 368 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 73/127 (57%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE--------------- 207 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V+ K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDKRLARIDELIPAKKIIH 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL++ + ++H+V A ++N+ + + L+++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQVDAIVHVVRAFDDDNITSVTGKVDPLEDM 125 Query: 263 SAYNSEL 269 + N EL Sbjct: 126 ATINMEL 132 >gi|323467279|gb|ADX70966.1| Predicted GTPase, probable translation factor [Lactobacillus helveticus H10] gi|323467322|gb|ADX71009.1| Predicted GTPase, probable translation factor [Lactobacillus helveticus H10] Length = 366 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDKRLARIQELIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V A +++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDD 110 >gi|300812297|ref|ZP_07092733.1| GTP-binding protein YchF [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496717|gb|EFK31803.1| GTP-binding protein YchF [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 366 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 18/109 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDKRLARIQELIPAKKVVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQA 253 F DI G++K A +G G+G++FL++ +T ++H+V A +EN+ + Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDENITS 114 >gi|295426133|ref|ZP_06818800.1| GTP-binding protein YchF [Lactobacillus amylolyticus DSM 11664] gi|295064169|gb|EFG55110.1| GTP-binding protein YchF [Lactobacillus amylolyticus DSM 11664] Length = 366 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDERLARIQELIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V A +++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIIHVVRAFDDD 110 >gi|42519766|ref|NP_965696.1| translation-associated GTPase [Lactobacillus johnsonii NCC 533] gi|268320130|ref|YP_003293786.1| hypothetical protein FI9785_1666 [Lactobacillus johnsonii FI9785] gi|41584056|gb|AAS09662.1| probable GTP-binding protein [Lactobacillus johnsonii NCC 533] gi|262398505|emb|CAX67519.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785] Length = 366 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDSRLARIQELIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V A +++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDD 110 >gi|116630293|ref|YP_815519.1| translation-associated GTPase [Lactobacillus gasseri ATCC 33323] gi|311110079|ref|ZP_07711476.1| GTP-binding protein YchF [Lactobacillus gasseri MV-22] gi|116095875|gb|ABJ61027.1| Predicted GTPase, probable translation factor [Lactobacillus gasseri ATCC 33323] gi|311065233|gb|EFQ45573.1| GTP-binding protein YchF [Lactobacillus gasseri MV-22] Length = 366 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDSRLARIQELIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V A +++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDD 110 >gi|258507242|ref|YP_003169993.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus rhamnosus GG] gi|257147169|emb|CAR86142.1| GTP-binding protein YchF [Lactobacillus rhamnosus GG] gi|259648608|dbj|BAI40770.1| translation-associated GTPase [Lactobacillus rhamnosus GG] Length = 368 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 73/127 (57%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDNRLARIDELIPAKKIIH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL++ + ++H+V A ++N+ + + L+++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQVDAIVHVVRAFDDDNITSVTGKVDPLEDM 125 Query: 263 SAYNSEL 269 + N EL Sbjct: 126 ATINMEL 132 >gi|238853715|ref|ZP_04644082.1| GTP-binding protein YchF [Lactobacillus gasseri 202-4] gi|300362904|ref|ZP_07059074.1| GTP-binding protein YchF [Lactobacillus gasseri JV-V03] gi|238833651|gb|EEQ25921.1| GTP-binding protein YchF [Lactobacillus gasseri 202-4] gi|300352954|gb|EFJ68832.1| GTP-binding protein YchF [Lactobacillus gasseri JV-V03] Length = 366 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDSRLARIQELIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V A +++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDD 110 >gi|227889295|ref|ZP_04007100.1| GTP-binding translation factor YchF [Lactobacillus johnsonii ATCC 33200] gi|227850097|gb|EEJ60183.1| GTP-binding translation factor YchF [Lactobacillus johnsonii ATCC 33200] Length = 366 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDSRLARIQELIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V A +++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDD 110 >gi|116493786|ref|YP_805520.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus casei ATCC 334] gi|116103936|gb|ABJ69078.1| Predicted GTPase, probable translation factor [Lactobacillus casei ATCC 334] Length = 368 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 73/127 (57%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE--------------- 207 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V+ K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDKRLARIDELIPAKKIIH 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL++ + ++H+V A ++N+ + + L+++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQVDAIVHVVRAFDDDNITSVTGKVDPLEDM 125 Query: 263 SAYNSEL 269 + N EL Sbjct: 126 ATINMEL 132 >gi|282852931|ref|ZP_06262272.1| GTP-binding protein YchF [Lactobacillus gasseri 224-1] gi|282556039|gb|EFB61660.1| GTP-binding protein YchF [Lactobacillus gasseri 224-1] Length = 366 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDSRLARIQELIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V A +++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDD 110 >gi|313124630|ref|YP_004034889.1| GTPase, translation factor [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312281193|gb|ADQ61912.1| Predicted GTPase, probable translation factor [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325684931|gb|EGD27075.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 366 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 18/109 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDKRLARIQELIPAKKVVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQA 253 F DI G++K A +G G+G++FL++ +T ++H+V A +EN+ + Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDENITS 114 >gi|306820419|ref|ZP_07454055.1| GTP-binding protein YchF [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551494|gb|EFM39449.1| GTP-binding protein YchF [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 365 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVAVPDFRVDKLSEINHSKKTV 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL H ++H+V A E++ Sbjct: 63 HTTIEFVDIAGLVKGASKGEGLGNKFLSHIREVEAIIHVVRAFEDS 108 >gi|104774700|ref|YP_619680.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514828|ref|YP_813734.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103423781|emb|CAI98789.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116094143|gb|ABJ59296.1| Predicted GTPase, probable translation factor [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126522|gb|ADY85852.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 366 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 18/109 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDKRLARIQELIPAKKVVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQA 253 F DI G++K A +G G+G++FL++ +T ++H+V A +EN+ + Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDENITS 114 >gi|20808085|ref|NP_623256.1| translation-associated GTPase [Thermoanaerobacter tengcongensis MB4] gi|20516668|gb|AAM24860.1| predicted GTPase [Thermoanaerobacter tengcongensis MB4] Length = 363 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 29/170 (17%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +IGI+GLPN GKST ++T+A + A+YPF T+ PN+GIV E ++ Sbjct: 2 EIGIVGLPNVGKSTLFNAITKAGAECANYPFCTIEPNVGIVSVPDERLDFLAKIENPQKV 61 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 + A DI G++K A +G G+G++FL H +L++V E++ + +D + Sbjct: 62 VPATIKFVDIAGLVKGASKGEGLGNKFLSHIREVDAILNVVRCFEDSNIVHVEGSIDPV- 120 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDTLAR---KKNELATQCGQVPFEFSSI 310 + +EI+ L I D +T+ R K ++LA + FE + Sbjct: 121 -------RDVEIINLELI-LADLETVERRMQKTSKLARNDKKAAFELEVL 162 >gi|227894003|ref|ZP_04011808.1| GTP-binding translation factor YchF [Lactobacillus ultunensis DSM 16047] gi|227864204|gb|EEJ71625.1| GTP-binding translation factor YchF [Lactobacillus ultunensis DSM 16047] Length = 366 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDKRLARIQELIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V A +++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDD 110 >gi|315039143|ref|YP_004032711.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus amylovorus GRL 1112] gi|325957614|ref|YP_004293026.1| GTP-binding protein YchF [Lactobacillus acidophilus 30SC] gi|312277276|gb|ADQ59916.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus amylovorus GRL 1112] gi|325334179|gb|ADZ08087.1| GTP-binding protein YchF [Lactobacillus acidophilus 30SC] gi|327184259|gb|AEA32706.1| GTP-binding protein YchF [Lactobacillus amylovorus GRL 1118] Length = 366 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDERLARIQELIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V A +++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDD 110 >gi|296111120|ref|YP_003621501.1| GTP-binding protein [Leuconostoc kimchii IMSNU 11154] gi|295832651|gb|ADG40532.1| GTP-binding protein [Leuconostoc kimchii IMSNU 11154] Length = 366 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/143 (32%), Positives = 77/143 (53%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAEMANYPFATIEPNVGMVEVPDDRLARIQEIEPADKIIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCI---LDEL 262 F DI GI+K A QG G+G++FL++ + + ++H+V A + + I LD++ Sbjct: 66 TTFEFTDIAGIVKGASQGEGLGNKFLENIRQVNAIIHVVRAFDGDDIIHVNGIVNPLDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL L+ ++T+D Sbjct: 126 DTINTELI-------LADLETID 141 >gi|242372650|ref|ZP_04818224.1| GTP-binding protein [Staphylococcus epidermidis M23864:W1] gi|242349705|gb|EES41306.1| GTP-binding protein [Staphylococcus epidermidis M23864:W1] Length = 365 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 32/160 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDSRLLKLEEMVQPKKTIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + +V A +ENV + LD++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDENVTHVSGRVNPLDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELA 297 N EL L+ +++VD + +AR+K++ A Sbjct: 126 EVINMELV-------LADLESVDKRLPKIEKMARQKDKTA 158 >gi|125973394|ref|YP_001037304.1| GTP-dependent nucleic acid-binding protein EngD [Clostridium thermocellum ATCC 27405] gi|256004371|ref|ZP_05429352.1| GTP-binding protein YchF [Clostridium thermocellum DSM 2360] gi|281417596|ref|ZP_06248616.1| GTP-binding protein YchF [Clostridium thermocellum JW20] gi|125713619|gb|ABN52111.1| GTP-binding protein YchF [Clostridium thermocellum ATCC 27405] gi|255991655|gb|EEU01756.1| GTP-binding protein YchF [Clostridium thermocellum DSM 2360] gi|281408998|gb|EFB39256.1| GTP-binding protein YchF [Clostridium thermocellum JW20] gi|316940371|gb|ADU74405.1| GTP-binding protein YchF [Clostridium thermocellum DSM 1313] Length = 364 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 +GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV E YK Sbjct: 3 MGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGIVAVPDERLNKLAEMYKPEKVT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL H ++H+V E++ Sbjct: 63 PTTIEFV--DIAGLVKGASKGEGLGNKFLSHIREVDAIVHVVRCFEDS 108 >gi|314935010|ref|ZP_07842369.1| GTP-binding protein YchF [Staphylococcus caprae C87] gi|313652940|gb|EFS16703.1| GTP-binding protein YchF [Staphylococcus caprae C87] Length = 365 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 32/160 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDSRLFKLEEMVQPKKTIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + +V A +ENV + LD++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDENVTHVSGRVNPLDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELA 297 N EL L+ +++VD + +AR+K++ A Sbjct: 126 EVINMELV-------LADLESVDKRLPKIEKMARQKDKTA 158 >gi|223043362|ref|ZP_03613408.1| GTP-binding protein YchF [Staphylococcus capitis SK14] gi|222443151|gb|EEE49250.1| GTP-binding protein YchF [Staphylococcus capitis SK14] Length = 365 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 32/160 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDSRLFKLEEMVQPKKTIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + +V A +ENV + LD++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDENVTHVSGRVNPLDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELA 297 N EL L+ +++VD + +AR+K++ A Sbjct: 126 EVINMELV-------LADLESVDKRLPKIEKMARQKDKTA 158 >gi|183221493|ref|YP_001839489.1| GTP-dependent nucleic acid-binding protein EngD [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911580|ref|YP_001963135.1| GTP-dependent nucleic acid-binding protein EngD [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776256|gb|ABZ94557.1| GTPase, probable translation factor [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779915|gb|ABZ98213.1| Putative GTP-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 365 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 24/131 (18%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK---- 206 + GI+GLPN GKST ++T+A + A+YPF T+ PN G+V+ E YK Sbjct: 4 NCGIVGLPNVGKSTIFNALTKAGAQAANYPFCTIEPNTGVVEVPDERLNRLAEIYKPKRT 63 Query: 207 -----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI-- 258 EF+ DI G++K A QG G+G++FL H + H+V A + EN+ + + Sbjct: 64 VPTMIEFV--DIAGLVKGASQGEGLGNQFLSHIREVDAICHVVRAFQDENITHVHGKVDP 121 Query: 259 LDELSAYNSEL 269 +++++ N EL Sbjct: 122 IEDITVINYEL 132 >gi|326692155|ref|ZP_08229160.1| GTP-binding protein YchF [Leuconostoc argentinum KCTC 3773] Length = 366 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 75/127 (59%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFILA----- 211 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V+ +E + A Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDDRLARIQELVPADKIIP 65 Query: 212 ------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI GI+K A QG G+G++FL++ + + ++H+V A + +++ + LD++ Sbjct: 66 TTFEFTDIAGIVKGASQGEGLGNKFLENIRQVNAIVHVVRAFDGDDIIHVNGVVNPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 DTINTEL 132 >gi|116328196|ref|YP_797916.1| translation-associated GTPase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120940|gb|ABJ78983.1| GTPase, probable translation factor [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 365 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/131 (35%), Positives = 69/131 (52%), Gaps = 24/131 (18%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++ +YPF T+ PN GIV+ Sbjct: 4 NCGIVGLPNVGKSTIFNALTKAGAQMENYPFCTIEPNKGIVEVPDLRLERLAEIAKPQKV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI-- 258 EF+ DI G++K A QG G+G++FL H + H+V A E ENV + I Sbjct: 64 VPAIIEFV--DIAGLVKGASQGEGLGNKFLSHIREVDTICHVVRAFEDENVTHVHGKINP 121 Query: 259 LDELSAYNSEL 269 +D+ + N EL Sbjct: 122 VDDAAVVNMEL 132 >gi|227511974|ref|ZP_03942023.1| GTP-binding translation factor YchF [Lactobacillus buchneri ATCC 11577] gi|227524959|ref|ZP_03955008.1| GTP-binding translation factor YchF [Lactobacillus hilgardii ATCC 8290] gi|227084782|gb|EEI20094.1| GTP-binding translation factor YchF [Lactobacillus buchneri ATCC 11577] gi|227087871|gb|EEI23183.1| GTP-binding translation factor YchF [Lactobacillus hilgardii ATCC 8290] Length = 366 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE--------------- 207 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V+ K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDKRLDRIQELIPAKKVVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL++ + ++H+V A ++N+ I +D++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQVDAIVHVVRAFDDDNITHVSGKIDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N EL G++ +D V+ Sbjct: 126 ETINLEL-------GIADLDAVN 141 >gi|227509068|ref|ZP_03939117.1| GTP-binding translation factor YchF [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191455|gb|EEI71522.1| GTP-binding translation factor YchF [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 366 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE--------------- 207 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V+ K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDKRLDRIQELIPAKKVVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL++ + ++H+V A ++N+ I +D++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQVDAIVHVVRAFDDDNITHVSGKIDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N EL G++ +D V+ Sbjct: 126 ETINLEL-------GIADLDAVN 141 >gi|116330920|ref|YP_800638.1| translation-associated GTPase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116124609|gb|ABJ75880.1| GTPase, probable translation factor [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 365 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/131 (35%), Positives = 69/131 (52%), Gaps = 24/131 (18%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++ +YPF T+ PN GIV+ Sbjct: 4 NCGIVGLPNVGKSTIFNALTKAGAQMENYPFCTIEPNKGIVEVPDLRLERLAEIAKPQKV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI-- 258 EF+ DI G++K A QG G+G++FL H + H+V A E ENV + I Sbjct: 64 VPAIIEFV--DIAGLVKGASQGEGLGNKFLSHIREVDAICHVVRAFEDENVTHVHGKINP 121 Query: 259 LDELSAYNSEL 269 +D+ + N EL Sbjct: 122 VDDAAVVNMEL 132 >gi|227432678|ref|ZP_03914651.1| GTP-binding translation factor YchF [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351560|gb|EEJ41813.1| GTP-binding translation factor YchF [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 366 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDNRLARIQEVVPADKIIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCI---LDEL 262 F DI GI+K A QG G+G++FL++ + + ++H+V A + + + LD++ Sbjct: 66 TTFEFTDIAGIVKGASQGEGLGNKFLENIRQVNAIVHVVRAFDGDEIIHVNGVVDPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 ETINTEL 132 >gi|116617474|ref|YP_817845.1| GTPase, translation factor [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096321|gb|ABJ61472.1| Predicted GTPase, probable translation factor [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 366 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDTRLARIQEVVPADKIIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCI---LDEL 262 F DI GI+K A QG G+G++FL++ + + ++H+V A + + + LD++ Sbjct: 66 TTFEFTDIAGIVKGASQGEGLGNKFLENIRQVNAIVHVVRAFDGDEIIHVNGVVDPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 ETINTEL 132 >gi|31544866|ref|NP_853444.1| GTP-dependent nucleic acid-binding protein EngD [Mycoplasma gallisepticum str. R(low)] gi|19699026|gb|AAL91130.1| GTP-binding protein [Mycoplasma gallisepticum] gi|31541712|gb|AAP57012.1| YchF subfamily translation-associated GTPase [Mycoplasma gallisepticum str. R(low)] gi|284930942|gb|ADC30881.1| YchF subfamily translation-associated GTPase [Mycoplasma gallisepticum str. R(high)] Length = 367 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GIIGLPN GKST ++T A +A+YPF T+ P+ GIV K Y Sbjct: 5 GIIGLPNVGKSTLFNAITNANSLVANYPFATIEPSFGIVELLDDRLNQLAKQIKPDKVVY 64 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 + DI G++KNA +G G+G++FL + L+H+V + +N+ + + ++++ Sbjct: 65 ATIMFVDIAGLVKNASKGEGLGNKFLSNIREVDCLIHVVRCFDNKNITHVHNHVDPINDI 124 Query: 263 SAYNSEL 269 N EL Sbjct: 125 ETINLEL 131 >gi|229542330|ref|ZP_04431390.1| GTP-binding protein YchF [Bacillus coagulans 36D1] gi|229326750|gb|EEN92425.1| GTP-binding protein YchF [Bacillus coagulans 36D1] Length = 366 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY------- 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ E Y Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAESANYPFCTIDPNVGMVEVPDERLEKLTELYHPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + H+V E EN+ + +D++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRCFEDENITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELAT 298 N EL L+ ++TVD + +A++K++ A Sbjct: 126 ETINLELI-------LADLETVDKRIGRVEKIAKQKDKEAV 159 >gi|284931697|gb|ADC31635.1| YchF subfamily translation-associated GTPase [Mycoplasma gallisepticum str. F] Length = 367 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GIIGLPN GKST ++T A +A+YPF T+ P+ GIV K Y Sbjct: 5 GIIGLPNVGKSTLFNAITNANSLVANYPFATIEPSFGIVELLDDRLNQLAKQIKPDKVVY 64 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++KNA +G G+G++FL + L+H+V + Sbjct: 65 ATIMFVDIAGLVKNASKGEGLGNKFLSNIREVDCLIHVVRCFD 107 >gi|116334621|ref|YP_796148.1| translation-associated GTPase [Lactobacillus brevis ATCC 367] gi|116099968|gb|ABJ65117.1| Predicted GTPase, probable translation factor [Lactobacillus brevis ATCC 367] Length = 366 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFILA----- 211 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V+ + +E I A Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDNRLDRIQELIPAKKVVP 65 Query: 212 ------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 DI GI+K A +G G+G++FL++ + ++H+V A ++N+ I +D++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNQFLENIRQVDAIVHVVRAFDDDNITHVSGKIDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N EL GLS ++ V+ Sbjct: 126 ETINLEL-------GLSDLEAVN 141 >gi|159040657|ref|YP_001539909.1| translation-associated GTPase [Caldivirga maquilingensis IC-167] gi|157919492|gb|ABW00919.1| GTPase-like protein [Caldivirga maquilingensis IC-167] Length = 419 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------VKEGYKEF 208 +GI+G PNAGKSTF A+ T KIA YPFTT+ PN+G+ VK+ + Sbjct: 25 VGIVGKPNAGKSTFFAASTLIDVKIAPYPFTTIEPNVGVGYVTIPCVCRDLGVKDNPRNS 84 Query: 209 I-----------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 I L D+ G++ A QG G+G++FL H R VL+H+V A Sbjct: 85 ICMDGTRLIPVELIDVAGLVPGAWQGRGLGNQFLDHLRRAPVLIHVVDA 133 >gi|326390533|ref|ZP_08212089.1| GTP-binding protein YchF [Thermoanaerobacter ethanolicus JW 200] gi|325993358|gb|EGD51794.1| GTP-binding protein YchF [Thermoanaerobacter ethanolicus JW 200] Length = 364 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 29/166 (17%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +IGI+GLPN GKST ++T+A + A+YPF T+ PN+GIV E ++ Sbjct: 2 EIGIVGLPNVGKSTLFNAITKAGAECANYPFCTIEPNVGIVSVPDERLDFLSKIENPQKI 61 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 I A DI G++K A +G G+G++FL H +L++V E++ + +D + Sbjct: 62 IPATIKFVDIAGLVKGASKGEGLGNKFLSHIREVDAILNVVRCFEDSNIVHVEGSIDPI- 120 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDTLAR---KKNELATQCGQVPFE 306 + +EI+ L I D + + R K ++LA + FE Sbjct: 121 -------RDVEIITLELI-LADMEVIERRLQKTSKLARNDKKAAFE 158 >gi|12044874|ref|NP_072684.1| GTP-dependent nucleic acid-binding protein EngD [Mycoplasma genitalium G37] gi|255660380|ref|ZP_05405789.1| GTP-dependent nucleic acid-binding protein EngD [Mycoplasma genitalium G37] gi|1351788|sp|P47270|Y024_MYCGE RecName: Full=Probable GTP-binding protein MG024 gi|3844633|gb|AAC71240.1| GTP-binding protein YchF [Mycoplasma genitalium G37] gi|166078651|gb|ABY79269.1| GTP-binding protein YchF [synthetic Mycoplasma genitalium JCVI-1.0] Length = 367 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST +++T + +IA+YPF T+ PN GIV K Y Sbjct: 5 GIVGLPNVGKSTLFSAITNLQVEIANYPFATIEPNTGIVNVSDERLDKLASLINPEKIVY 64 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F DI G++K A QG G+G++FL + ++ H+V ++ Sbjct: 65 TTFRFVDIAGLVKGASQGQGLGNQFLANIREVDLICHVVRCFQD 108 >gi|116490233|ref|YP_809777.1| GTPase, translation factor [Oenococcus oeni PSU-1] gi|118586489|ref|ZP_01543933.1| GTP-binding protein [Oenococcus oeni ATCC BAA-1163] gi|290889615|ref|ZP_06552705.1| hypothetical protein AWRIB429_0095 [Oenococcus oeni AWRIB429] gi|116090958|gb|ABJ56112.1| Predicted GTPase, probable translation factor [Oenococcus oeni PSU-1] gi|118433053|gb|EAV39775.1| GTP-binding protein [Oenococcus oeni ATCC BAA-1163] gi|290480813|gb|EFD89447.1| hypothetical protein AWRIB429_0095 [Oenococcus oeni AWRIB429] Length = 367 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 26/141 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGVVEVPDSRLARIQEIEPADKVVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILDE 261 F DI GI+K A +G G+G++FL++ +T ++ +V A E++ V I D Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQTDAIIEVVRAFEDSEITHVTGKVDPIAD- 124 Query: 262 LSAYNSELRKKIEIVGLSQID 282 + N+EL I + QID Sbjct: 125 IETINTELI----IADMEQID 141 >gi|28379581|ref|NP_786473.1| translation-associated GTPase [Lactobacillus plantarum WCFS1] gi|254557724|ref|YP_003064141.1| translation-associated GTPase [Lactobacillus plantarum JDM1] gi|300769520|ref|ZP_07079406.1| GTP-binding protein YchF [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308181810|ref|YP_003925938.1| translation-associated GTPase [Lactobacillus plantarum subsp. plantarum ST-III] gi|28272421|emb|CAD65345.1| GTP-binding protein [Lactobacillus plantarum WCFS1] gi|254046651|gb|ACT63444.1| translation-associated GTPase [Lactobacillus plantarum JDM1] gi|300492935|gb|EFK28117.1| GTP-binding protein YchF [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308047301|gb|ADN99844.1| translation-associated GTPase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 366 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 62/105 (59%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE--------------- 207 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V+ K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDKRLDRIQEIIPAKKVVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL++ + ++H+V A +++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQVDAIVHVVRAFDDD 110 >gi|256851850|ref|ZP_05557238.1| translation-associated GTPase [Lactobacillus jensenii 27-2-CHN] gi|260661889|ref|ZP_05862799.1| translation-associated GTPase [Lactobacillus jensenii 115-3-CHN] gi|282931972|ref|ZP_06337436.1| GTP-binding protein YchF [Lactobacillus jensenii 208-1] gi|297205474|ref|ZP_06922870.1| GTP-binding protein YchF [Lactobacillus jensenii JV-V16] gi|256615808|gb|EEU20997.1| translation-associated GTPase [Lactobacillus jensenii 27-2-CHN] gi|260547358|gb|EEX23338.1| translation-associated GTPase [Lactobacillus jensenii 115-3-CHN] gi|281303914|gb|EFA96052.1| GTP-binding protein YchF [Lactobacillus jensenii 208-1] gi|297150052|gb|EFH30349.1| GTP-binding protein YchF [Lactobacillus jensenii JV-V16] Length = 366 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDPRLARIDELIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V + +++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIIHVVRSFDDD 110 >gi|289436045|ref|YP_003465917.1| GTP-binding protein YchF [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172289|emb|CBH28835.1| GTP-binding protein YchF [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313631466|gb|EFR98777.1| GTP-binding protein YchF [Listeria seeligeri FSL N1-067] gi|313635832|gb|EFS01823.1| GTP-binding protein YchF [Listeria seeligeri FSL S4-171] Length = 366 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGIVEVPDHRLNKLTELVKPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + H+ +EN+ + LD++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVTRCFDDENITHVEGRVDPLDDI 125 Query: 263 SAYNSEL 269 S N EL Sbjct: 126 STINLEL 132 >gi|238854401|ref|ZP_04644743.1| GTP-binding protein YchF [Lactobacillus jensenii 269-3] gi|260665094|ref|ZP_05865944.1| translation-associated GTPase [Lactobacillus jensenii SJ-7A-US] gi|282931805|ref|ZP_06337290.1| GTP-binding protein YchF [Lactobacillus jensenii 208-1] gi|238833023|gb|EEQ25318.1| GTP-binding protein YchF [Lactobacillus jensenii 269-3] gi|260561148|gb|EEX27122.1| translation-associated GTPase [Lactobacillus jensenii SJ-7A-US] gi|281304112|gb|EFA96229.1| GTP-binding protein YchF [Lactobacillus jensenii 208-1] Length = 366 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 63/105 (60%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDPRLARIDELIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL++ +T ++H+V + +++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNKFLENIRQTDAIIHVVRSFDDD 110 >gi|302874622|ref|YP_003843255.1| GTP-binding protein YchF [Clostridium cellulovorans 743B] gi|307690767|ref|ZP_07633213.1| GTP-dependent nucleic acid-binding protein EngD [Clostridium cellulovorans 743B] gi|302577479|gb|ADL51491.1| GTP-binding protein YchF [Clostridium cellulovorans 743B] Length = 365 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V ++ Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVNVPDKRLDVLEKIYNTKRKV 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 Y DI G++K A +G G+G++FL H + + H+V E ENV Sbjct: 63 YANVEFYDIAGLVKGASKGEGLGNKFLSHIRESAAICHVVRCFEDENV 110 >gi|227891376|ref|ZP_04009181.1| GTP-binding translation factor YchF [Lactobacillus salivarius ATCC 11741] gi|227866765|gb|EEJ74186.1| GTP-binding translation factor YchF [Lactobacillus salivarius ATCC 11741] Length = 366 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDSRLARIDEIIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL++ + ++H+V A ++N+ + L+++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQVDAIVHVVRAFDDDNITHVANKVDPLEDI 125 Query: 263 SAYNSEL 269 N EL Sbjct: 126 DTINMEL 132 >gi|301301108|ref|ZP_07207265.1| GTP-binding protein YchF [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851237|gb|EFK78964.1| GTP-binding protein YchF [Lactobacillus salivarius ACS-116-V-Col5a] Length = 366 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDSRLARIDEIIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL++ + ++H+V A ++N+ + L+++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQVDAIVHVVRAFDDDNITHVANKVDPLEDI 125 Query: 263 SAYNSEL 269 N EL Sbjct: 126 DTINMEL 132 >gi|300215176|gb|ADJ79592.1| GTP-binding protein, probable translation factor [Lactobacillus salivarius CECT 5713] Length = 366 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDSRLARIDEIIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL++ + ++H+V A ++N+ + L+++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQVDAIVHVVRAFDDDNITHVANKVDPLEDI 125 Query: 263 SAYNSEL 269 N EL Sbjct: 126 DTINMEL 132 >gi|90962563|ref|YP_536479.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus salivarius UCC118] gi|90821757|gb|ABE00396.1| GTP-binding protein, probable translation factor [Lactobacillus salivarius UCC118] Length = 366 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDSRLARIDEIIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL++ + ++H+V A ++N+ + L+++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQVDAIVHVVRAFDDDNITHVANKVDPLEDI 125 Query: 263 SAYNSEL 269 N EL Sbjct: 126 DTINMEL 132 >gi|218281563|ref|ZP_03487992.1| hypothetical protein EUBIFOR_00557 [Eubacterium biforme DSM 3989] gi|218217352|gb|EEC90890.1| hypothetical protein EUBIFOR_00557 [Eubacterium biforme DSM 3989] Length = 367 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+++ + A+YPF T+ PN+G+V K Y Sbjct: 6 GIVGLPNVGKSTLFNAITKSQVEAANYPFATIQPNVGVVEVPDYRIDRLVEIFNPKKTIY 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 F DI G++K A QG G+G++FL + T + H+V + Sbjct: 66 TTFEFTDIAGLVKGASQGEGLGNQFLSNIRLTDAICHVVRCFD 108 >gi|167037215|ref|YP_001664793.1| GTP-dependent nucleic acid-binding protein EngD [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167040645|ref|YP_001663630.1| GTP-dependent nucleic acid-binding protein EngD [Thermoanaerobacter sp. X514] gi|300914686|ref|ZP_07132002.1| GTP-binding protein YchF [Thermoanaerobacter sp. X561] gi|307724080|ref|YP_003903831.1| GTP-binding protein YchF [Thermoanaerobacter sp. X513] gi|320115634|ref|YP_004185793.1| GTP-binding protein YchF [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166854885|gb|ABY93294.1| GTP-binding protein YchF [Thermoanaerobacter sp. X514] gi|166856049|gb|ABY94457.1| GTP-binding protein YchF [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|300889621|gb|EFK84767.1| GTP-binding protein YchF [Thermoanaerobacter sp. X561] gi|307581141|gb|ADN54540.1| GTP-binding protein YchF [Thermoanaerobacter sp. X513] gi|319928725|gb|ADV79410.1| GTP-binding protein YchF [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 363 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 29/167 (17%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +IGI+GLPN GKST ++T+A + A+YPF T+ PN+GIV E ++ Sbjct: 2 EIGIVGLPNVGKSTLFNAITKAGAECANYPFCTIEPNVGIVAVPDKRLDFLAKIENPQKV 61 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 I A DI G++K A +G G+G++FL H +L++V E++ + +D + Sbjct: 62 IPATIKFVDIAGLVKGASKGEGLGNKFLSHIREVDAILNVVRCFEDSNIVHVEGSIDPI- 120 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDTLAR---KKNELATQCGQVPFEF 307 + +EI+ L I D + + R K ++LA + FE Sbjct: 121 -------RDVEIITLELI-LADMEVVERRLQKTSKLARNDKKAAFEL 159 >gi|254518686|ref|ZP_05130742.1| translation-associated GTPase [Clostridium sp. 7_2_43FAA] gi|226912435|gb|EEH97636.1| translation-associated GTPase [Clostridium sp. 7_2_43FAA] Length = 365 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 17/106 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 ++GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K+ Sbjct: 2 NLGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVSVPDKRLDVLEKMYNTKKK 61 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y DI G++K A +G G+G++FL H ++H+V ++ Sbjct: 62 VYTAVEFYDIAGLVKGASKGEGLGNKFLSHIREVSAIVHVVRCFDD 107 >gi|310827281|ref|YP_003959638.1| GTP-binding protein YchF [Eubacterium limosum KIST612] gi|308739015|gb|ADO36675.1| GTP-binding protein YchF [Eubacterium limosum KIST612] Length = 361 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/130 (36%), Positives = 71/130 (54%), Gaps = 24/130 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V ++ Y+ Sbjct: 3 IGIVGLPNVGKSTIFNAITKAGAESANYPFCTIDPNVGVVTVPDERLEVLEKMYQSKRVV 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--L 259 EF+ DI G+++ A +G G+G++FL H + H+V E ENV I L Sbjct: 63 PTTIEFV--DIAGLVRGASKGEGLGNKFLSHIREVDAIAHVVRCFEDENVVHVEGKIDPL 120 Query: 260 DELSAYNSEL 269 D+L N EL Sbjct: 121 DDLETINLEL 130 >gi|116493449|ref|YP_805184.1| GTPase, translation factor [Pediococcus pentosaceus ATCC 25745] gi|116103599|gb|ABJ68742.1| Predicted GTPase, probable translation factor [Pediococcus pentosaceus ATCC 25745] Length = 368 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 62/105 (59%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDQRLDRIQEIIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL++ + ++H+V A +++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQVDAIVHVVRAFDDD 110 >gi|299782737|gb|ADJ40735.1| GTP-binding translation factor YchF [Lactobacillus fermentum CECT 5716] Length = 365 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDSRLARIDELIPAKKIVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL++ +T ++H+V A +++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDD 110 >gi|227514201|ref|ZP_03944250.1| GTP-binding translation factor YchF [Lactobacillus fermentum ATCC 14931] gi|227087433|gb|EEI22745.1| GTP-binding translation factor YchF [Lactobacillus fermentum ATCC 14931] Length = 365 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDSRLARIDELIPAKKIVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL++ +T ++H+V A +++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDD 110 >gi|304385708|ref|ZP_07368052.1| GTP-binding protein YchF [Pediococcus acidilactici DSM 20284] gi|304328212|gb|EFL95434.1| GTP-binding protein YchF [Pediococcus acidilactici DSM 20284] Length = 368 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 62/105 (59%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDARLARIQEIIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL++ + ++H+V A +++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQVDAIVHVVRAFDDD 110 >gi|184154555|ref|YP_001842895.1| GTP-dependent nucleic acid-binding protein EngD [Lactobacillus fermentum IFO 3956] gi|260662616|ref|ZP_05863511.1| GTP-binding protein YchF [Lactobacillus fermentum 28-3-CHN] gi|183225899|dbj|BAG26415.1| GTP-binding protein [Lactobacillus fermentum IFO 3956] gi|260553307|gb|EEX26250.1| GTP-binding protein YchF [Lactobacillus fermentum 28-3-CHN] Length = 365 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDSRLARIDELIPAKKIVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL++ +T ++H+V A +++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQTDAIVHVVRAFDDD 110 >gi|116874141|ref|YP_850922.1| translation-associated GTPase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116743019|emb|CAK22143.1| GTP-binding protein YchF [Listeria welshimeri serovar 6b str. SLCC5334] Length = 366 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGIVEVPDHRLNKLTELVKPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + H+ +EN+ + LD++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVTRCFDDENITHVEGRVDPLDDI 125 Query: 263 SAYNSEL 269 S N EL Sbjct: 126 STINLEL 132 >gi|51894084|ref|YP_076775.1| GTP-dependent nucleic acid-binding protein EngD [Symbiobacterium thermophilum IAM 14863] gi|51857773|dbj|BAD41931.1| highly conserved GTP-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 367 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 50/148 (33%), Positives = 73/148 (49%), Gaps = 26/148 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 IGI+GLPN GKST ++TRA + A+YPF T+ PN+G+V +LA Sbjct: 5 IGIVGLPNVGKSTLFNAITRAGAEAANYPFCTIEPNVGVVDVPDARLPVLAKMFNSARIV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 DI GI+K A +G G+G++FL H + H+V E+ +D LS Sbjct: 65 PTSIKFIDIAGIVKGASKGEGLGNKFLHHIREVDAIAHVVRCFEDPNVTHVSGRVDPLS- 123 Query: 265 YNSELRKKIEIVGLSQIDTVDSDTLARK 292 IE++ L I D +T+ R+ Sbjct: 124 -------DIEVINLELI-LADLETIERR 143 >gi|313616512|gb|EFR89383.1| GTP-binding protein YchF [Listeria innocua FSL S4-378] Length = 366 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGIVEVPDHRLNKLTELVKPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + H+ +EN+ + LD++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVTRCFDDENITHVEGRVDPLDDI 125 Query: 263 SAYNSEL 269 S N EL Sbjct: 126 STINLEL 132 >gi|284800335|ref|YP_003412200.1| translation-associated GTPase [Listeria monocytogenes 08-5578] gi|284993520|ref|YP_003415288.1| translation-associated GTPase [Listeria monocytogenes 08-5923] gi|284055897|gb|ADB66838.1| translation-associated GTPase [Listeria monocytogenes 08-5578] gi|284058987|gb|ADB69926.1| translation-associated GTPase [Listeria monocytogenes 08-5923] Length = 366 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGIVEVPDHRLNKLTELVKPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + H+ +EN+ + LD++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVTRCFDDENITHVEGRVDPLDDI 125 Query: 263 SAYNSEL 269 S N EL Sbjct: 126 STINLEL 132 >gi|16801978|ref|NP_472246.1| GTP-dependent nucleic acid-binding protein EngD [Listeria innocua Clip11262] gi|16804816|ref|NP_466301.1| GTP-dependent nucleic acid-binding protein EngD [Listeria monocytogenes EGD-e] gi|46908969|ref|YP_015358.1| GTP-dependent nucleic acid-binding protein EngD [Listeria monocytogenes serotype 4b str. F2365] gi|47092669|ref|ZP_00230456.1| GTP-binding protein YchF [Listeria monocytogenes str. 4b H7858] gi|47095586|ref|ZP_00233194.1| GTP-binding protein YchF [Listeria monocytogenes str. 1/2a F6854] gi|217966014|ref|YP_002351692.1| GTP-binding protein YchF [Listeria monocytogenes HCC23] gi|224498375|ref|ZP_03666724.1| translation-associated GTPase [Listeria monocytogenes Finland 1988] gi|224502809|ref|ZP_03671116.1| translation-associated GTPase [Listeria monocytogenes FSL R2-561] gi|226225332|ref|YP_002759439.1| GTP-binding protein [Listeria monocytogenes Clip81459] gi|254824852|ref|ZP_05229853.1| translation-associated GTPase [Listeria monocytogenes FSL J1-194] gi|254827347|ref|ZP_05232034.1| translation-associated GTPase [Listeria monocytogenes FSL N3-165] gi|254830784|ref|ZP_05235439.1| GTP-dependent nucleic acid-binding protein EngD [Listeria monocytogenes 10403S] gi|254851914|ref|ZP_05241262.1| GTP-binding protein YchF [Listeria monocytogenes FSL R2-503] gi|254899763|ref|ZP_05259687.1| GTP-dependent nucleic acid-binding protein EngD [Listeria monocytogenes J0161] gi|254913034|ref|ZP_05263046.1| GTP-binding protein YchF [Listeria monocytogenes J2818] gi|254930944|ref|ZP_05264303.1| translation-associated GTPase [Listeria monocytogenes HPB2262] gi|254937415|ref|ZP_05269112.1| translation-associated GTPase [Listeria monocytogenes F6900] gi|254992807|ref|ZP_05274997.1| GTP-dependent nucleic acid-binding protein EngD [Listeria monocytogenes FSL J2-064] gi|255016987|ref|ZP_05289113.1| GTP-dependent nucleic acid-binding protein EngD [Listeria monocytogenes FSL F2-515] gi|255025148|ref|ZP_05297134.1| GTP-dependent nucleic acid-binding protein EngD [Listeria monocytogenes FSL J2-003] gi|255029443|ref|ZP_05301394.1| GTP-dependent nucleic acid-binding protein EngD [Listeria monocytogenes LO28] gi|255521559|ref|ZP_05388796.1| GTP-dependent nucleic acid-binding protein EngD [Listeria monocytogenes FSL J1-175] gi|290891961|ref|ZP_06554958.1| translation-associated GTPase [Listeria monocytogenes FSL J2-071] gi|300763460|ref|ZP_07073458.1| GTP-binding protein YchF [Listeria monocytogenes FSL N1-017] gi|16412279|emb|CAD00992.1| lmo2779 [Listeria monocytogenes EGD-e] gi|16415460|emb|CAC98144.1| lin2919 [Listeria innocua Clip11262] gi|46882242|gb|AAT05535.1| GTP-binding protein YchF [Listeria monocytogenes serotype 4b str. F2365] gi|47016016|gb|EAL06941.1| GTP-binding protein YchF [Listeria monocytogenes str. 1/2a F6854] gi|47018964|gb|EAL09710.1| GTP-binding protein YchF [Listeria monocytogenes str. 4b H7858] gi|217335284|gb|ACK41078.1| GTP-binding protein YchF [Listeria monocytogenes HCC23] gi|225877794|emb|CAS06509.1| Putative GTP-binding protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258599725|gb|EEW13050.1| translation-associated GTPase [Listeria monocytogenes FSL N3-165] gi|258605210|gb|EEW17818.1| GTP-binding protein YchF [Listeria monocytogenes FSL R2-503] gi|258610017|gb|EEW22625.1| translation-associated GTPase [Listeria monocytogenes F6900] gi|290558555|gb|EFD92072.1| translation-associated GTPase [Listeria monocytogenes FSL J2-071] gi|293582491|gb|EFF94523.1| translation-associated GTPase [Listeria monocytogenes HPB2262] gi|293591034|gb|EFF99368.1| GTP-binding protein YchF [Listeria monocytogenes J2818] gi|293594094|gb|EFG01855.1| translation-associated GTPase [Listeria monocytogenes FSL J1-194] gi|300515737|gb|EFK42786.1| GTP-binding protein YchF [Listeria monocytogenes FSL N1-017] gi|307572370|emb|CAR85549.1| GTP-dependent nucleic acid-binding protein [Listeria monocytogenes L99] gi|313621924|gb|EFR92583.1| GTP-binding protein YchF [Listeria innocua FSL J1-023] gi|328468257|gb|EGF39263.1| GTP-binding protein YchF [Listeria monocytogenes 1816] gi|328469124|gb|EGF40072.1| GTP-binding protein YchF [Listeria monocytogenes 220] gi|332313212|gb|EGJ26307.1| GTP-dependent nucleic acid-binding protein engD [Listeria monocytogenes str. Scott A] Length = 366 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGIVEVPDHRLNKLTELVKPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + H+ +EN+ + LD++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVTRCFDDENITHVEGRVDPLDDI 125 Query: 263 SAYNSEL 269 S N EL Sbjct: 126 STINLEL 132 >gi|270290034|ref|ZP_06196260.1| GTP-binding protein YchF [Pediococcus acidilactici 7_4] gi|270281571|gb|EFA27403.1| GTP-binding protein YchF [Pediococcus acidilactici 7_4] Length = 368 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 62/105 (59%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDARLARIQEIIPAKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL++ + ++H+V A +++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQVDAIVHVVRAFDDD 110 >gi|145591863|ref|YP_001153865.1| translation-associated GTPase [Pyrobaculum arsenaticum DSM 13514] gi|145283631|gb|ABP51213.1| GTPase of unknown function-like protein [Pyrobaculum arsenaticum DSM 13514] Length = 401 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 45/108 (41%), Positives = 58/108 (53%), Gaps = 23/108 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------------------- 200 IGI+G PNAGKSTF A+ T KI+ PFTT+ PN+GI Sbjct: 9 IGIVGKPNAGKSTFFAAATLKDVKISPMPFTTIDPNIGIGYVRIDDCPCGSIRCNPRSYS 68 Query: 201 VKEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 V EG Y L D+ G++ A QG G+G++FL H R VL+H+V A Sbjct: 69 VVEGVCYAPVELIDVAGLVPGAWQGRGLGNQFLDHLRRAPVLIHVVDA 116 >gi|332687253|ref|YP_004457027.1| GTP-binding and nucleic acid-binding protein YchF [Melissococcus plutonius ATCC 35311] gi|332371262|dbj|BAK22218.1| GTP-binding and nucleic acid-binding protein YchF [Melissococcus plutonius ATCC 35311] Length = 366 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGVEAANYPFATIEPNVGIVEVPDDRLDQLTELFQPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A QG G+G++FL H + + H+V +++ Sbjct: 66 ATFEFTDIAGIVKGASQGEGLGNQFLSHIRQVDAICHVVRCFDDD 110 >gi|189485155|ref|YP_001956096.1| GTP-dependent nucleic acid-binding protein EngD [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287114|dbj|BAG13635.1| GTP-dependent nucleic acid-binding protein EngD [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 363 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 21/106 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +GIIGLPN GKST ++T A+ + A+YPF T+ PN+G+V Sbjct: 3 LGIIGLPNVGKSTLFNAITEARSETANYPFCTIDPNVGVVNVPDKRLDFLEKLYNSKKKV 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 EF+ DI G++K A QG G+G++FL H T ++H V E Sbjct: 63 HATAEFL--DIAGLVKGASQGEGLGNQFLSHIRETAAVIHTVRCFE 106 >gi|284047297|ref|YP_003397637.1| GTP-binding protein YchF [Conexibacter woesei DSM 14684] gi|283951518|gb|ADB54262.1| GTP-binding protein YchF [Conexibacter woesei DSM 14684] Length = 359 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 61/102 (59%), Gaps = 17/102 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFILA---- 211 +GI+G+PNAGKS+ ++TRA + A+YPFTT+ PN+ +V + E + A Sbjct: 3 VGIVGMPNAGKSSLFNALTRAGAEAANYPFTTIEPNVAVVPVEDERIDALAELLGASEIV 62 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 DI G+++ AH+G G+G++FL + T ++H+V A Sbjct: 63 ADSIDFHDIAGLVRGAHEGEGLGNQFLANIRETDAIIHVVRA 104 >gi|121535350|ref|ZP_01667162.1| GTP-binding protein YchF [Thermosinus carboxydivorans Nor1] gi|121306042|gb|EAX46972.1| GTP-binding protein YchF [Thermosinus carboxydivorans Nor1] Length = 368 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 26/149 (17%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK---- 206 ++GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ E YK Sbjct: 6 EVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVEVPDERLWTLAEMYKPRKT 65 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 DI G++K A QG G+G++FL H + + +V + + LD L Sbjct: 66 TPTAMRFVDIAGLVKGASQGEGLGNKFLSHIRQVDAVAQVVRCFADANITHVEGALDPL- 124 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDTLARK 292 + IEI+ +++ D +T+A++ Sbjct: 125 -------RDIEIIN-TELCLADLETVAKR 145 >gi|11498960|ref|NP_070193.1| translation-associated GTPase [Archaeoglobus fulgidus DSM 4304] gi|2649213|gb|AAB89884.1| GTP-binding protein [Archaeoglobus fulgidus DSM 4304] Length = 388 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 43/109 (39%), Positives = 66/109 (60%), Gaps = 22/109 (20%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI----VK------------ 202 + +IGI G PNAGKSTF + T A +IA+YPFTT+ PN+GI VK Sbjct: 1 MIEIGIAGKPNAGKSTFFKAATLADAEIANYPFTTIKPNVGIGHVRVKCVCQELGVKCNE 60 Query: 203 --EGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 +G++ FI L D+ G++ +AH+G G+G+ FL + ++ ++H+V A Sbjct: 61 CVDGWR-FIPVKLIDVAGLVPDAHKGRGLGNEFLDNLRQSEAVIHVVDA 108 >gi|89898353|ref|YP_515463.1| GTP-dependent nucleic acid-binding protein EngD [Chlamydophila felis Fe/C-56] gi|89331725|dbj|BAE81318.1| GTP binding protein [Chlamydophila felis Fe/C-56] Length = 364 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 + GIIGLPN GKS ++T A+ +YPF T+ PN+GIV K Sbjct: 5 ECGIIGLPNVGKSGLFNALTGAQVASCNYPFCTIDPNIGIVPVIDNRLDILAKMSQSQKV 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y + DI G++K A GAG+G+RFL H TH + H+V + + Sbjct: 65 IYADMKFVDIAGLVKGASDGAGLGNRFLSHIRETHAIAHVVRCFDND 111 >gi|256751319|ref|ZP_05492199.1| GTP-binding protein HSR1-related protein [Thermoanaerobacter ethanolicus CCSD1] gi|256749874|gb|EEU62898.1| GTP-binding protein HSR1-related protein [Thermoanaerobacter ethanolicus CCSD1] Length = 168 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 29/167 (17%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +IGI+GLPN GKST ++T+A + A+YPF T+ PN+GIV E ++ Sbjct: 2 EIGIVGLPNVGKSTLFNAITKAGAECANYPFCTIEPNVGIVAVPDERLDFLAKIENPQKV 61 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 I A DI G++K A +G G+G++FL H +L++V E++ + +D + Sbjct: 62 IPATIKFVDIAGLVKGASKGEGLGNKFLSHIREVDAILNVVRCFEDSNIVHVEGSIDPI- 120 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDTLAR---KKNELATQCGQVPFEF 307 + +EI+ L I D + + R K ++LA + FE Sbjct: 121 -------RDVEIITLELI-LADMEVVERRLQKTSKLARNDKKAAFEL 159 >gi|307595327|ref|YP_003901644.1| GTPase [Vulcanisaeta distributa DSM 14429] gi|307550528|gb|ADN50593.1| GTPase of unknown function domain protein [Vulcanisaeta distributa DSM 14429] Length = 405 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 44/107 (41%), Positives = 58/107 (54%), Gaps = 24/107 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------VKEGYKEF 208 IGI+G PN GKSTF A+ T KIA YPFTT+ PN+GI VK+ + Sbjct: 9 IGIVGKPNVGKSTFFAAATMIDVKIAPYPFTTIEPNVGIGYVRIPCVCRDLGVKDNPRNS 68 Query: 209 I-----------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 I L D+ G++ A QG G+G++FL H R VL+H+V Sbjct: 69 ICIEGNRFIPVELIDVAGLVPGAWQGRGLGNQFLDHLRRAPVLIHVV 115 >gi|228474173|ref|ZP_04058910.1| GTP-binding protein YchF [Staphylococcus hominis SK119] gi|314935175|ref|ZP_07842528.1| GTP-binding protein YchF [Staphylococcus hominis subsp. hominis C80] gi|228271868|gb|EEK13205.1| GTP-binding protein YchF [Staphylococcus hominis SK119] gi|313656510|gb|EFS20249.1| GTP-binding protein YchF [Staphylococcus hominis subsp. hominis C80] Length = 365 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 32/160 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDTRLNKLTEMVEPKKTIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQ--AAYQCILDEL 262 F DI GI+K A +G G+G++FL H + +V A +ENV A LD++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDENVTHVAGRVNPLDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELA 297 N EL L+ +++V+ + +AR+K++ A Sbjct: 126 EVINMELV-------LADLESVEKRLPRIEKMARQKDKTA 158 >gi|331269344|ref|YP_004395836.1| GTP-binding protein YchF [Clostridium botulinum BKT015925] gi|329125894|gb|AEB75839.1| GTP-binding protein YchF [Clostridium botulinum BKT015925] Length = 365 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K+ Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVAVPDKRLDVLEKMYETKKKI 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y DI G++K A +G G+G++FL H ++H+V +++ Sbjct: 63 YATVEFYDIAGLVKGASKGEGLGNKFLSHIREVEAIVHVVRCFQDD 108 >gi|188587506|ref|YP_001919051.1| GTP-binding protein YchF [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352193|gb|ACB86463.1| GTP-binding protein YchF [Natranaerobius thermophilus JW/NM-WN-LF] Length = 368 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 68/133 (51%), Gaps = 24/133 (18%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------------- 201 I GIIGLPN GKST ++T A +A+Y F T+ PN GIV Sbjct: 3 ILKCGIIGLPNVGKSTLFNALTNAGAAVANYAFCTVDPNKGIVAIPDERLEQVKYCAGSP 62 Query: 202 --KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAY--Q 256 EG EF+ DI G++K A+QG G+G++FL H L+H++ E ENV Y Sbjct: 63 EKTEGSIEFV--DIAGLVKGANQGEGLGNQFLSHIREMDALIHVLRGFEDENVGHIYGQP 120 Query: 257 CILDELSAYNSEL 269 I ++L N EL Sbjct: 121 DIHEDLEVINLEL 133 >gi|23100935|ref|NP_694402.1| translation-associated GTPase [Oceanobacillus iheyensis HTE831] gi|22779170|dbj|BAC15436.1| GTP-binding protein [Oceanobacillus iheyensis HTE831] Length = 366 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 81/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAEAANYPFATIDPNVGIVEVPDERLNKLTELVNPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNQFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELAT 298 N EL L+ +DTV+ + LAR+K++ A Sbjct: 126 EIINLELI-------LADLDTVNKRYQRVEKLARQKDKDAV 159 >gi|253681986|ref|ZP_04862783.1| GTP-binding protein YchF [Clostridium botulinum D str. 1873] gi|253561698|gb|EES91150.1| GTP-binding protein YchF [Clostridium botulinum D str. 1873] Length = 365 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K+ Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVAVPDKRLDVLEKMYETKKKI 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y DI G++K A +G G+G++FL H ++H+V +++ Sbjct: 63 YATVEFYDIAGLVKGASKGEGLGNKFLSHIREVEAIVHVVRCFQDD 108 >gi|110801535|ref|YP_699149.1| GTP-dependent nucleic acid-binding protein EngD [Clostridium perfringens SM101] gi|110682036|gb|ABG85406.1| GTP-binding protein YchF [Clostridium perfringens SM101] Length = 365 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +G++GLPN GKST ++T+A + A+YPF T+ PN+G+V K+ Sbjct: 3 LGMVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVSVPDKRLDVLEKIYNTKKKV 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 Y DI G++K A +G G+G++FL H ++H+V +ENV Sbjct: 63 YTAIEFYDIAGLVKGASKGEGLGNKFLSHIREVAAIVHVVRCFDDENV 110 >gi|70727630|ref|YP_254546.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus haemolyticus JCSC1435] gi|68448356|dbj|BAE05940.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 365 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 32/160 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK------ 206 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV+ E K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDSRLNKLTEMVKPKKTIP 65 Query: 207 -EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + +V A +ENV + LD++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDENVTHVSGRVNPLDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELA 297 N EL L+ +++V+ + +AR+K++ A Sbjct: 126 EVINMELV-------LADLESVEKRLPRIEKMARQKDKTA 158 >gi|305676745|ref|YP_003868417.1| putative GTPase with RNA binding site [Bacillus subtilis subsp. spizizenii str. W23] gi|305414989|gb|ADM40108.1| putative GTPase with RNA binding site [Bacillus subtilis subsp. spizizenii str. W23] Length = 366 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 38/174 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDDRLQKLTELVNPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + H+V A ++N+ + +D++ Sbjct: 66 TAFQFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFSDDNITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELATQCGQVPFEFSSIT 311 N EL L+ ++TV+ LA++K++ A FEF ++ Sbjct: 126 ETINLELI-------LADMETVEKRITRVSKLAKQKDKEAV------FEFEILS 166 >gi|18310848|ref|NP_562782.1| translation-associated GTPase [Clostridium perfringens str. 13] gi|110799604|ref|YP_696549.1| GTP-dependent nucleic acid-binding protein EngD [Clostridium perfringens ATCC 13124] gi|168206080|ref|ZP_02632085.1| GTP-binding protein YchF [Clostridium perfringens E str. JGS1987] gi|168210771|ref|ZP_02636396.1| GTP-binding protein YchF [Clostridium perfringens B str. ATCC 3626] gi|168215225|ref|ZP_02640850.1| GTP-binding protein YchF [Clostridium perfringens CPE str. F4969] gi|168215495|ref|ZP_02641120.1| GTP-binding protein YchF [Clostridium perfringens NCTC 8239] gi|169343656|ref|ZP_02864655.1| GTP-binding protein YchF [Clostridium perfringens C str. JGS1495] gi|182626156|ref|ZP_02953916.1| GTP-binding protein YchF [Clostridium perfringens D str. JGS1721] gi|18145530|dbj|BAB81572.1| probable GTP-binding protein [Clostridium perfringens str. 13] gi|110674251|gb|ABG83238.1| GTP-binding protein YchF [Clostridium perfringens ATCC 13124] gi|169298216|gb|EDS80306.1| GTP-binding protein YchF [Clostridium perfringens C str. JGS1495] gi|170662398|gb|EDT15081.1| GTP-binding protein YchF [Clostridium perfringens E str. JGS1987] gi|170711164|gb|EDT23346.1| GTP-binding protein YchF [Clostridium perfringens B str. ATCC 3626] gi|170713377|gb|EDT25559.1| GTP-binding protein YchF [Clostridium perfringens CPE str. F4969] gi|177908593|gb|EDT71118.1| GTP-binding protein YchF [Clostridium perfringens D str. JGS1721] gi|182382129|gb|EDT79608.1| GTP-binding protein YchF [Clostridium perfringens NCTC 8239] Length = 365 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +G++GLPN GKST ++T+A + A+YPF T+ PN+G+V K+ Sbjct: 3 LGMVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVSVPDKRLDVLEKIYNTKKKV 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 Y DI G++K A +G G+G++FL H ++H+V +ENV Sbjct: 63 YTAIEFYDIAGLVKGASKGEGLGNKFLSHIREVAAIVHVVRCFDDENV 110 >gi|296330021|ref|ZP_06872505.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|296153060|gb|EFG93925.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus subtilis subsp. spizizenii ATCC 6633] Length = 366 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 38/174 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDDRLQKLTELVNPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + H+V A ++N+ + +D++ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFSDDNITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELATQCGQVPFEFSSIT 311 N EL L+ ++TV+ LA++K++ A FEF ++ Sbjct: 126 ETINLELI-------LADMETVEKRITRVSKLAKQKDKEAV------FEFEILS 166 >gi|239637260|ref|ZP_04678248.1| GTP-binding protein YchF [Staphylococcus warneri L37603] gi|239597216|gb|EEQ79725.1| GTP-binding protein YchF [Staphylococcus warneri L37603] gi|330685081|gb|EGG96748.1| GTP-binding protein YchF [Staphylococcus epidermidis VCU121] Length = 365 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 32/160 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDSRLLKLEEMVQPKKTIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + +V A +ENV + LD++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDENVTHVSGRVNPLDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELA 297 N EL L+ +++V+ + +AR+K++ A Sbjct: 126 EVINMELV-------LADLESVEKRLPKIEKMARQKDKTA 158 >gi|27469293|ref|NP_765930.1| translation-associated GTPase [Staphylococcus epidermidis ATCC 12228] gi|57865980|ref|YP_187641.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus epidermidis RP62A] gi|251811316|ref|ZP_04825789.1| GTP-binding protein [Staphylococcus epidermidis BCM-HMP0060] gi|282874669|ref|ZP_06283551.1| GTP-binding protein YchF [Staphylococcus epidermidis SK135] gi|293367629|ref|ZP_06614281.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus epidermidis M23864:W2(grey)] gi|27316843|gb|AAO06018.1|AE016752_51 GTP-binding protein [Staphylococcus epidermidis ATCC 12228] gi|57636638|gb|AAW53426.1| conserved hypothetical protein TIGR00092 [Staphylococcus epidermidis RP62A] gi|251805183|gb|EES57840.1| GTP-binding protein [Staphylococcus epidermidis BCM-HMP0060] gi|281296593|gb|EFA89105.1| GTP-binding protein YchF [Staphylococcus epidermidis SK135] gi|291318199|gb|EFE58593.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus epidermidis M23864:W2(grey)] gi|329723884|gb|EGG60411.1| GTP-binding protein YchF [Staphylococcus epidermidis VCU144] gi|329734375|gb|EGG70689.1| GTP-binding protein YchF [Staphylococcus epidermidis VCU028] gi|329736076|gb|EGG72349.1| GTP-binding protein YchF [Staphylococcus epidermidis VCU045] Length = 365 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 32/160 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDSRLIKLEEMVQPKKTIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + +V A +ENV + LD++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDENVTHVSGRVNPLDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELA 297 N EL L+ +++V+ + +AR+K++ A Sbjct: 126 EVINMELV-------LADLESVEKRLPKIEKMARQKDKTA 158 >gi|307266523|ref|ZP_07548056.1| GTP-binding protein HSR1-related protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306918442|gb|EFN48683.1| GTP-binding protein HSR1-related protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 168 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +IGI+GLPN GKST ++T+A + A+YPF T+ PN+GIV E ++ Sbjct: 2 EIGIVGLPNVGKSTLFNAITKAGAECANYPFCTIEPNVGIVAVPDERLDFLAKIENPQKV 61 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 I A DI G++K A +G G+G++FL H +L++V E++ Sbjct: 62 IPATIKFVDIAGLVKGASKGEGLGNKFLSHIREVDAILNVVRCFEDS 108 >gi|16081144|ref|NP_391972.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus subtilis subsp. subtilis str. 168] gi|221312074|ref|ZP_03593921.1| translation-associated GTPase [Bacillus subtilis subsp. subtilis str. 168] gi|221316399|ref|ZP_03598204.1| translation-associated GTPase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221321312|ref|ZP_03602606.1| translation-associated GTPase [Bacillus subtilis subsp. subtilis str. JH642] gi|221325595|ref|ZP_03606889.1| translation-associated GTPase [Bacillus subtilis subsp. subtilis str. SMY] gi|321313652|ref|YP_004205939.1| GTP-binding protein YchF [Bacillus subtilis BSn5] gi|586848|sp|P37518|ENGD_BACSU RecName: Full=GTP-dependent nucleic acid-binding protein engD gi|467376|dbj|BAA05222.1| unknown [Bacillus subtilis] gi|2636639|emb|CAB16129.1| putative GTPase with RNA binding site [Bacillus subtilis subsp. subtilis str. 168] gi|291486729|dbj|BAI87804.1| translation-associated GTPase [Bacillus subtilis subsp. natto BEST195] gi|320019926|gb|ADV94912.1| GTP-binding protein YchF [Bacillus subtilis BSn5] Length = 366 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDDRLQKLTELVNPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL H + + H+V A ++ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFSDD 110 >gi|242243296|ref|ZP_04797741.1| GTP-binding protein [Staphylococcus epidermidis W23144] gi|242233245|gb|EES35557.1| GTP-binding protein [Staphylococcus epidermidis W23144] gi|319399806|gb|EFV88054.1| GTP-dependent nucleic acid-binding protein engD [Staphylococcus epidermidis FRI909] Length = 365 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 32/160 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDSRLIKLEEMVQPKKTIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + +V A +ENV + LD++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDENVTHVSGRVNPLDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELA 297 N EL L+ +++V+ + +AR+K++ A Sbjct: 126 EVINMELV-------LADLESVEKRLPKIEKMARQKDKTA 158 >gi|332639014|ref|ZP_08417877.1| GTP-binding protein YchF [Weissella cibaria KACC 11862] Length = 367 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 62/105 (59%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEMANYPFATIEPNVGMVEVPDDRLARIQELVPADKIVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL++ + + ++H+V A +++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLENIRQVNAIVHVVRAFDDD 110 >gi|308175798|ref|YP_003922503.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus amyloliquefaciens DSM 7] gi|307608662|emb|CBI45033.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus amyloliquefaciens DSM 7] gi|328555774|gb|AEB26266.1| GTP-binding protein YchF [Bacillus amyloliquefaciens TA208] gi|328914163|gb|AEB65759.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus amyloliquefaciens LL3] Length = 366 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 38/174 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLQKLTELVNPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + H+V A ++N+ + +D++ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFADDNITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELATQCGQVPFEFSSIT 311 N EL L+ ++TV+ LA++K++ A FEF ++ Sbjct: 126 ETINLELI-------LADMETVEKRITRVSKLAKQKDKEAV------FEFDILS 166 >gi|260888784|ref|ZP_05900047.1| GTP-binding protein YchF [Selenomonas sputigena ATCC 35185] gi|330839824|ref|YP_004414404.1| GTP-binding protein YchF [Selenomonas sputigena ATCC 35185] gi|260861537|gb|EEX76037.1| GTP-binding protein YchF [Selenomonas sputigena ATCC 35185] gi|329747588|gb|AEC00945.1| GTP-binding protein YchF [Selenomonas sputigena ATCC 35185] Length = 368 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK---- 206 D+GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V E Y+ Sbjct: 5 DVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVDVPDARLAVLHEMYQSKKT 64 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL+H + + H+V E+ Sbjct: 65 TPASVRFVDIAGLVAGASKGEGLGNKFLEHIRQVDAIAHVVRCFEDT 111 >gi|218291074|ref|ZP_03495097.1| GTP-binding protein YchF [Alicyclobacillus acidocaldarius LAA1] gi|218238959|gb|EED06166.1| GTP-binding protein YchF [Alicyclobacillus acidocaldarius LAA1] Length = 366 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE--------------- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFCTIDPNVGVVEVPDPRLQVLADIVHPKRIVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 F DI G++K A QG G+G+RFL H ++H+V E Sbjct: 66 TAFEFVDIAGLVKGASQGEGLGNRFLAHIREVDAIVHVVRCFE 108 >gi|322420136|ref|YP_004199359.1| GTP-binding protein YchF [Geobacter sp. M18] gi|320126523|gb|ADW14083.1| GTP-binding protein YchF [Geobacter sp. M18] Length = 364 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 27/154 (17%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-----------YKEFI 209 + GI+GLPN GKST ++T A + A+YPF T+ PN+GIV + E I Sbjct: 4 NCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVSVPDPRMDKLAEIVHPERI 63 Query: 210 LA------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 L DI G++K A QG G+G++FL H +LH+V E ENV + + Sbjct: 64 LPTTIEFLDIAGLVKGASQGEGLGNKFLGHIRSVDAILHVVRCFENENVVHVSGSVSPVR 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 ++ +EL L+ +DTV+ L +K Sbjct: 124 DIEVIQTEL-------ALADLDTVEKRLLRTEKQ 150 >gi|258512889|ref|YP_003186323.1| GTP-binding protein YchF [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479615|gb|ACV59934.1| GTP-binding protein YchF [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 366 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE--------------- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFCTIDPNVGVVEVPDPRLQVLADIVHPKRIVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 F DI G++K A QG G+G+RFL H ++H+V E Sbjct: 66 TAFEFVDIAGLVKGASQGEGLGNRFLAHIREVDAIVHVVRCFE 108 >gi|154688196|ref|YP_001423357.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus amyloliquefaciens FZB42] gi|154354047|gb|ABS76126.1| EngD [Bacillus amyloliquefaciens FZB42] Length = 366 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 38/174 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLQKLTELVNPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + H+V A ++N+ + +D++ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFADDNITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELATQCGQVPFEFSSIT 311 N EL L+ ++TV+ LA++K++ A FEF ++ Sbjct: 126 ETINLELI-------LADMETVEKRITRVSKLAKQKDKEAV------FEFDILS 166 >gi|168186148|ref|ZP_02620783.1| GTP-binding protein YchF [Clostridium botulinum C str. Eklund] gi|169295641|gb|EDS77774.1| GTP-binding protein YchF [Clostridium botulinum C str. Eklund] Length = 365 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K+ Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVAVPDKRLDVLEKMYDTKKKV 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y DI G++K A +G G+G++FL H ++H+V ++ Sbjct: 63 YATVEFYDIAGLVKGASKGEGLGNKFLSHIREVEAIVHVVRCFNDD 108 >gi|118443130|ref|YP_878006.1| GTP-dependent nucleic acid-binding protein EngD [Clostridium novyi NT] gi|118133586|gb|ABK60630.1| GTP-binding protein YchF [Clostridium novyi NT] Length = 365 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K+ Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVAVPDKRLDVLEKMYDTKKKV 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y DI G++K A +G G+G++FL H ++H+V ++ Sbjct: 63 YATVEFYDIAGLVKGASKGEGLGNKFLSHIREVEAIVHVVRCFNDD 108 >gi|194016267|ref|ZP_03054881.1| GTP-binding protein YchF [Bacillus pumilus ATCC 7061] gi|194011740|gb|EDW21308.1| GTP-binding protein YchF [Bacillus pumilus ATCC 7061] Length = 366 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLQKLTELVQPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL H + + H+V A ++ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFADD 110 >gi|296875516|ref|ZP_06899588.1| GTP-binding protein YchF [Streptococcus parasanguinis ATCC 15912] gi|296433440|gb|EFH19215.1| GTP-binding protein YchF [Streptococcus parasanguinis ATCC 15912] Length = 378 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 24/139 (17%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------------- 201 K K+ GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V Sbjct: 5 KRKMALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEM 64 Query: 202 ----KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV----- 251 K F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 65 ITPKKTVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQG 124 Query: 252 -QAAYQCILDELSAYNSEL 269 + A+ L ++ N EL Sbjct: 125 REDAFVDPLADIDTINLEL 143 >gi|157694463|ref|YP_001488925.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus pumilus SAFR-032] gi|157683221|gb|ABV64365.1| GTP-binding protein [Bacillus pumilus SAFR-032] Length = 366 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLQKLTELVQPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL H + + H+V A ++ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFADD 110 >gi|255527768|ref|ZP_05394621.1| GTP-binding protein YchF [Clostridium carboxidivorans P7] gi|296187069|ref|ZP_06855468.1| GTP-binding protein YchF [Clostridium carboxidivorans P7] gi|255508555|gb|EET84942.1| GTP-binding protein YchF [Clostridium carboxidivorans P7] gi|296048356|gb|EFG87791.1| GTP-binding protein YchF [Clostridium carboxidivorans P7] Length = 366 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K+ Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVSVPDKRLDVLEKMYNSKKKV 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y DI G++K A +G G+G++FL H ++H+V ++ Sbjct: 63 YTAIEFYDIAGLVKGASKGEGLGNKFLSHIREVESIVHVVRCFDD 107 >gi|162447565|ref|YP_001620697.1| YchF family protein, GTPase [Acholeplasma laidlawii PG-8A] gi|161985672|gb|ABX81321.1| YchF family protein, GTPase [Acholeplasma laidlawii PG-8A] Length = 366 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 32/171 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG----------YK----- 206 IGI+GLPN GKST ++T+++ A+YPF T+ PN+G+V YK Sbjct: 4 IGIVGLPNVGKSTLFNAITKSQVTAANYPFATIDPNVGVVHVKDERLEKLAAIYKSGKII 63 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-- 260 EFI DI G++K A G G+G++FL H + + H++ E++ + +D Sbjct: 64 PTTIEFI--DIAGLVKGASSGEGLGNQFLSHIRQVDAIAHVIRCFEDSEITHVEGKVDPL 121 Query: 261 -ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSI 310 +L ELR LS +++VD LAR + ++ + + E S++ Sbjct: 122 RDLEIIEIELR-------LSDLESVDK-RLARLEKQVKVKIKEAIIEQSAL 164 >gi|332971414|gb|EGK10372.1| GTP-dependent nucleic acid-binding protein EngD [Desmospora sp. 8437] Length = 366 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE--------------- 207 GI+GLPN GKST ++TRA + A+YPF T+ PN+G+V + Sbjct: 6 GIVGLPNVGKSTLFNAITRAGAESANYPFCTIDPNVGVVDVPDERMNRLAEIVNPQRIVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++K A +G G+G++FL H ++H+V E++ Sbjct: 66 TSFQFTDIAGLVKGASKGEGLGNQFLSHIREVDAIIHVVRCFEDD 110 >gi|260437309|ref|ZP_05791125.1| GTP-binding protein YchF [Butyrivibrio crossotus DSM 2876] gi|292810221|gb|EFF69426.1| GTP-binding protein YchF [Butyrivibrio crossotus DSM 2876] Length = 365 Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVSVPDERLQLLSDLYNSAKIV 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL H T ++H+V E + Sbjct: 63 PAVIEFV--DIAGLVKGASKGEGLGNQFLSHIRETDAIVHVVRCFENS 108 >gi|221053412|ref|XP_002258080.1| gtp-binding protein [Plasmodium knowlesi strain H] gi|193807913|emb|CAQ38617.1| gtp-binding protein, putative [Plasmodium knowlesi strain H] Length = 754 Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 74/270 (27%), Positives = 130/270 (48%), Gaps = 37/270 (13%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F D V +SG GG RR K ++ G GG GG+V +++ ++ LI + Sbjct: 259 RFCDFLWVVAKSGKGGEPNYKRRRSKKLKGEG----YGGHGGNVILKSKKSIYDLI--KI 312 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQR------- 114 +Q KA GE K N G G D ++ VPVGT V + + C E R Sbjct: 313 EQKVKANDGE-NFKENSRGKDGSDKIVFVPVGTIVRKR----IYCKKKNENNRKMYKSIF 367 Query: 115 ----------IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 +++A GG GG + FK + P G++ ++ L+L+L+ D+ Sbjct: 368 WHQFLKENEELLVARGGKGGISYSFFKKHDYRLPEN------GEKMLLELELRLMNDVAF 421 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQ 222 IG+ N+GK++ +S++R I+ F+T P++ + +G E L D P + NAH+ Sbjct: 422 IGIGNSGKTSLCSSLSRYYGNISSQIFSTTIPHVSNINYIDGV-EITLLDTPFLFYNAHK 480 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 + G R L+H R+ ++++++ + ++ Sbjct: 481 DSSRGKRILRHLYRSKLIVYVIDVASDKLE 510 >gi|167769139|ref|ZP_02441192.1| hypothetical protein ANACOL_00462 [Anaerotruncus colihominis DSM 17241] gi|167668779|gb|EDS12909.1| hypothetical protein ANACOL_00462 [Anaerotruncus colihominis DSM 17241] Length = 365 Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 37/149 (24%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------K 202 +GI+GLPN GKST ++T A + A+YPF T+ PN+G+V Sbjct: 3 LGIVGLPNVGKSTLFNAITNAGAQSANYPFCTIEPNVGMVAVPDSRLDALAKLYDPDKFT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 EF+ DI G+++ A +G G+G++FL H ++H+V E+ E+ Sbjct: 63 PAVIEFV--DIAGLVRGASKGEGLGNKFLSHIREVDAVVHVVRCFEDG----------EI 110 Query: 263 SAYNSEL--RKKIEIVGL----SQIDTVD 285 + E+ R+ IE +GL S ID VD Sbjct: 111 VHVDGEIGPRRDIETIGLELIFSDIDIVD 139 >gi|26554480|ref|NP_758414.1| translation-associated GTPase [Mycoplasma penetrans HF-2] gi|26454490|dbj|BAC44818.1| GTP-binding protein [Mycoplasma penetrans HF-2] Length = 365 Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 40/192 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T + + A+YPF T+ PN+GIV K Y Sbjct: 6 GIVGLPNVGKSTLFNAITNSSVEAANYPFATIEPNVGIVNVPDVRLTNLANLINPEKVVY 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 F DI G++K A +G G+G++FL + + H++ E +++ Sbjct: 66 NTFKFVDIAGLVKGASKGEGLGNKFLSNIREVDAICHVIRCFENT----------DITHV 115 Query: 266 NSELR--KKIEIVGLSQIDT---VDSDTLARKKNELATQCGQVPFE-------FSSITGH 313 NS + + +EI+ L I + V ++ L R + ++C FE +++T Sbjct: 116 NSSVDPIRDLEIINLELIFSDIEVINNRLGRIGKKAQSRCKDSAFEKEVCEKILAALTNE 175 Query: 314 GIPQILECLHDK 325 + +E L+DK Sbjct: 176 KLANTVE-LNDK 186 >gi|150390656|ref|YP_001320705.1| GTP-binding protein YchF [Alkaliphilus metalliredigens QYMF] gi|149950518|gb|ABR49046.1| GTP-binding protein YchF [Alkaliphilus metalliredigens QYMF] Length = 364 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 63/106 (59%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGY--KEFI 209 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V KE Y ++ I Sbjct: 3 LGIVGLPNVGKSTLFNAITQAGAESANYPFCTIEPNIGVVAVPDYRLSNLKEMYNSQKVI 62 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI G++K A +G G+G++FL H ++H+V E++ Sbjct: 63 PAAIEFYDIAGLVKGASKGEGLGNKFLSHIREVESIVHVVRCFEDS 108 >gi|311070632|ref|YP_003975555.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus atrophaeus 1942] gi|310871149|gb|ADP34624.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus atrophaeus 1942] Length = 366 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLQKLTELVNPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL H + + H+V A ++ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRAFADD 110 >gi|290969065|ref|ZP_06560600.1| GTP-binding protein YchF [Megasphaera genomosp. type_1 str. 28L] gi|290781021|gb|EFD93614.1| GTP-binding protein YchF [Megasphaera genomosp. type_1 str. 28L] Length = 368 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 28/160 (17%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY--KEF 208 ++GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ + Y K+ Sbjct: 6 EVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVEVPDTRLRTLTDMYHPKKT 65 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 I A DI G++ A +G G+G++FL H T + +V E++ +D L Sbjct: 66 IPAVMRFVDIAGLVAGASKGEGLGNKFLSHIRETDAIAEVVRCFEDDNITHVSGSVDPL- 124 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA--TQCG 301 + I+I+ +++ D +T+ R+ + LA QCG Sbjct: 125 -------RDIDIIN-TELCLADLETVQRRVDRLAKIAQCG 156 >gi|327311740|ref|YP_004338637.1| translation-associated GTPase [Thermoproteus uzoniensis 768-20] gi|326948219|gb|AEA13325.1| translation-associated GTPase [Thermoproteus uzoniensis 768-20] Length = 399 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 45/107 (42%), Positives = 57/107 (53%), Gaps = 22/107 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------------------V 201 IGI+G PNAGKSTF A+ T KI PFTT+ PN+GI V Sbjct: 9 IGIVGKPNAGKSTFFAAATMKDVKIGPVPFTTVEPNVGIGYVRRDCPCKNLKCNPVSYLV 68 Query: 202 KEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 +G Y L D+ G++ A QG G+G++FL H R VL+HIV A Sbjct: 69 LDGVCYIPVELVDVAGLVPGAWQGRGLGNQFLDHIRRAPVLIHIVDA 115 >gi|226315510|ref|YP_002775406.1| GTP-dependent nucleic acid-binding protein EngD [Brevibacillus brevis NBRC 100599] gi|226098460|dbj|BAH46902.1| GTP-dependent nucleic acid-binding protein EngD [Brevibacillus brevis NBRC 100599] Length = 366 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 23/152 (15%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------K 202 A GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 3 ASCGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLEKLTQIVVPNK 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 F DI G++K A +G G+G++FL H + H+V E+ +D L Sbjct: 63 VVPTAFEFVDIAGLVKGASRGEGLGNQFLGHIREVDAIAHVVRCFEDENITHVAGRVDPL 122 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS--DTLARK 292 S + +E++ + +D+VD D +ARK Sbjct: 123 SDIET---INLELI-FADLDSVDRRIDRIARK 150 >gi|29840223|ref|NP_829329.1| translation-associated GTPase [Chlamydophila caviae GPIC] gi|29834571|gb|AAP05207.1| GTP-binding protein, YcfH family [Chlamydophila caviae GPIC] Length = 364 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 + GI+GLPN GKS ++T A+ +YPF T+ PN+GIV K Sbjct: 5 ECGIVGLPNVGKSGLFNALTGAQVASCNYPFCTIDPNVGIVPVIDNRLDVLAKMSQSQKV 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y + DI G++K A GAG+G+RFL H TH + H+V + + Sbjct: 65 IYADMKFVDIAGLVKGAADGAGLGNRFLSHIRETHAIAHVVRCFDND 111 >gi|148265699|ref|YP_001232405.1| GTP-dependent nucleic acid-binding protein EngD [Geobacter uraniireducens Rf4] gi|146399199|gb|ABQ27832.1| GTP-binding protein YchF [Geobacter uraniireducens Rf4] Length = 364 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 27/153 (17%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK---EGYKEFIL------- 210 + GI+GLPN GKST ++T A + A+YPF T+ PN+GIV+ E K+ + Sbjct: 4 NCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVQVPDERMKQLAVIVKPERI 63 Query: 211 -------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 DI G++K A QG G+G++FL H ++H+V E ENV + + Sbjct: 64 LPTTIEFLDIAGLVKGASQGEGLGNKFLGHIRSVDAIVHVVRCFEDENVVHVSGSVDPVS 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++ +EL GL+ +D+V+ + +K Sbjct: 124 DIEVIKTEL-------GLADLDSVEKKLVRVEK 149 >gi|126460411|ref|YP_001056689.1| translation-associated GTPase [Pyrobaculum calidifontis JCM 11548] gi|126250132|gb|ABO09223.1| GTPase of unknown function-like protein [Pyrobaculum calidifontis JCM 11548] Length = 401 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 45/108 (41%), Positives = 58/108 (53%), Gaps = 23/108 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------------------- 200 +GI+G PNAGKSTF A+ T KI+ PFTT+ PN+GI Sbjct: 9 VGIVGKPNAGKSTFFAAATLKDVKISPVPFTTIDPNVGIGYARVDDCPCAKIKCNPRSYM 68 Query: 201 VKEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 V +G Y L D+ G++ A QG G+G++FL H R VLLHIV A Sbjct: 69 VIDGVCYAPVELIDVAGLVPGAWQGRGLGNQFLDHLRRAPVLLHIVDA 116 >gi|329942813|ref|ZP_08291592.1| GTP Binding Protein [Chlamydophila psittaci Cal10] gi|332287405|ref|YP_004422306.1| GTP-dependent nucleic acid-binding protein [Chlamydophila psittaci 6BC] gi|313847985|emb|CBY16982.1| putative ATP/GTP-binding protein [Chlamydophila psittaci RD1] gi|325506931|gb|ADZ18569.1| GTP-dependent nucleic acid-binding protein [Chlamydophila psittaci 6BC] gi|328815073|gb|EGF85062.1| GTP Binding Protein [Chlamydophila psittaci Cal10] gi|328914654|gb|AEB55487.1| GTP-binding protein YchF [Chlamydophila psittaci 6BC] Length = 364 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 17/108 (15%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKS ++T A+ +YPF T+ PN+GIV K Sbjct: 4 TECGIVGLPNVGKSGLFNALTGAQVASCNYPFCTIDPNIGIVPVIDDRLDILAKMSQSQK 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y + DI G++K A GAG+G+RFL H TH + H+V + + Sbjct: 64 VIYADMKFVDIAGLVKGAADGAGLGNRFLSHIRETHAVAHVVRCFDND 111 >gi|189425648|ref|YP_001952825.1| GTP-dependent nucleic acid-binding protein EngD [Geobacter lovleyi SZ] gi|189421907|gb|ACD96305.1| GTP-binding protein YchF [Geobacter lovleyi SZ] Length = 364 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 27/153 (17%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 + GI+GLPN GKST ++T A + A+YPF T+ PN+GIV K Sbjct: 4 NCGIVGLPNVGKSTIFNAITSAGAESANYPFCTIDPNVGIVQVPDPRIDQLSAIVKPQKC 63 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQCI-LD 260 + DI G++K A G G+G++FL H ++H+V +++ V A + D Sbjct: 64 QFTTIEFVDIAGLVKGASAGEGLGNQFLGHIRSVDAVVHVVRCFDDDNVVHVAGKVSPAD 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++ N+EL LS +DT++ L +K Sbjct: 124 DIEIINTEL-------ALSDLDTLEKKVLRAEK 149 >gi|150015880|ref|YP_001308134.1| GTP-dependent nucleic acid-binding protein EngD [Clostridium beijerinckii NCIMB 8052] gi|149902345|gb|ABR33178.1| GTP-binding protein YchF [Clostridium beijerinckii NCIMB 8052] Length = 365 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +G++GLPN GKST ++T+A + A+YPF T+ PN+G+V K+ Sbjct: 3 LGMVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVSVPDKRLDVLEKMYNTKKKV 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y DI G++K A +G G+G++FL H ++H+V ++ Sbjct: 63 YTAIEFYDIAGLVKGASKGEGLGNKFLSHIREVAAIVHVVRCFDD 107 >gi|15834986|ref|NP_296745.1| translation-associated GTPase [Chlamydia muridarum Nigg] gi|270285155|ref|ZP_06194549.1| GTP-dependent nucleic acid-binding protein EngD [Chlamydia muridarum Nigg] gi|270289176|ref|ZP_06195478.1| GTP-dependent nucleic acid-binding protein EngD [Chlamydia muridarum Weiss] gi|301336550|ref|ZP_07224752.1| GTP-dependent nucleic acid-binding protein EngD [Chlamydia muridarum MopnTet14] gi|8163210|gb|AAF73549.1| GTP-binding protein, YchF family [Chlamydia muridarum Nigg] Length = 364 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 17/108 (15%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKS ++T A+ +YPF T+ PN+GIV K Sbjct: 4 TECGIVGLPNVGKSGLFNALTGAQVASCNYPFCTIDPNVGIVPVVDSRLEILARISQSHK 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y + DI G++K A GAG+G+RFL H TH + H+V + + Sbjct: 64 IIYADMKFVDIAGLVKGAASGAGLGNRFLSHIRETHAIAHVVRCFDND 111 >gi|260588072|ref|ZP_05853985.1| GTP-binding protein YchF [Blautia hansenii DSM 20583] gi|331082359|ref|ZP_08331485.1| GTP-binding protein YchF [Lachnospiraceae bacterium 6_1_63FAA] gi|260541599|gb|EEX22168.1| GTP-binding protein YchF [Blautia hansenii DSM 20583] gi|330400845|gb|EGG80446.1| GTP-binding protein YchF [Lachnospiraceae bacterium 6_1_63FAA] Length = 365 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/130 (37%), Positives = 70/130 (53%), Gaps = 24/130 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV---KEGYK------------ 206 +GI+GLPN GKST S+T+A + A+YPF T+ PN+GIV E K Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGIVAVPDERLKLLGDFYQSKKVT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--L 259 EF+ DI G++K A +G G+G++FL + ++H+V E ENV CI L Sbjct: 63 PAVIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDENVIHVDGCIDPL 120 Query: 260 DELSAYNSEL 269 ++ N EL Sbjct: 121 RDIETINLEL 130 >gi|62185076|ref|YP_219861.1| translation-associated GTPase [Chlamydophila abortus S26/3] gi|62148143|emb|CAH63900.1| putative ATP/GTP-binding protein [Chlamydophila abortus S26/3] Length = 364 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 17/108 (15%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKS ++T A+ +YPF T+ PN+GIV K Sbjct: 4 TECGIVGLPNVGKSGLFNALTGAQVASCNYPFCTIDPNIGIVPVIDNRLDILAKMSQSQK 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y + DI G++K A GAG+G+RFL H TH + H+V + + Sbjct: 64 VIYADMKFVDIAGLVKGAADGAGLGNRFLSHIRETHAVAHVVRCFDND 111 >gi|289578686|ref|YP_003477313.1| GTP-binding protein YchF [Thermoanaerobacter italicus Ab9] gi|289528399|gb|ADD02751.1| GTP-binding protein YchF [Thermoanaerobacter italicus Ab9] Length = 363 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 29/166 (17%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +IGI+GLPN GKST ++T+A + A+YPF T+ PN+GIV E ++ Sbjct: 2 EIGIVGLPNVGKSTLFNAITKAGAECANYPFCTIEPNVGIVSVPDERLDFLSKIEKPQKV 61 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 I A DI G+ K A +G G+G++FL H +L++V E++ + +D + Sbjct: 62 IPATIKFVDIAGLTKGASKGEGLGNKFLSHIREVDAILNVVRCFEDSNIVHVEGSIDPI- 120 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDTLAR---KKNELATQCGQVPFE 306 + +EI+ L I D + + R K ++LA + FE Sbjct: 121 -------RDVEIITLELI-LADMEVIERRLQKTSKLARNDKKAAFE 158 >gi|6672050|dbj|BAA88662.1| GTP binding protein [Chlamydophila pneumoniae] Length = 364 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 + GI+GLPN GKS ++T A+ +YPF T+ PN+GIV K Sbjct: 5 ECGIVGLPNVGKSGLFNALTGAQVASCNYPFCTIDPNVGIVPVIDERLEALAKISNSQKI 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y + DI G++K A GAG+G+RFL H TH + H+V ++ Sbjct: 65 IYADMKFVDIAGLVKGASDGAGLGNRFLSHIRETHAIAHVVRCFDD 110 >gi|15618241|ref|NP_224526.1| GTP-dependent nucleic acid-binding protein EngD [Chlamydophila pneumoniae CWL029] gi|15835856|ref|NP_300380.1| translation-associated GTPase [Chlamydophila pneumoniae J138] gi|16752717|ref|NP_444984.1| translation-associated GTPase [Chlamydophila pneumoniae AR39] gi|33241666|ref|NP_876607.1| translation-associated GTPase [Chlamydophila pneumoniae TW-183] gi|4376598|gb|AAD18470.1| GTP Binding Protein [Chlamydophila pneumoniae CWL029] gi|8163431|gb|AAF73667.1| GTP-binding protein, YcfH family [Chlamydophila pneumoniae AR39] gi|8978695|dbj|BAA98531.1| GTP binding protein [Chlamydophila pneumoniae J138] gi|33236175|gb|AAP98264.1| putative GTP-binding protein [Chlamydophila pneumoniae TW-183] gi|269303195|gb|ACZ33295.1| GTP-dependent nucleic acid-binding protein engD [Chlamydophila pneumoniae LPCoLN] Length = 364 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 + GI+GLPN GKS ++T A+ +YPF T+ PN+GIV K Sbjct: 5 ECGIVGLPNVGKSGLFNALTGAQVASCNYPFCTIDPNVGIVPVIDERLEALAKISNSQKI 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y + DI G++K A GAG+G+RFL H TH + H+V ++ Sbjct: 65 IYADMKFVDIAGLVKGASDGAGLGNRFLSHIRETHAIAHVVRCFDD 110 >gi|297544906|ref|YP_003677208.1| GTP-binding protein YchF [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842681|gb|ADH61197.1| GTP-binding protein YchF [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 363 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 29/166 (17%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +IGI+GLPN GKST ++T+A + A+YPF T+ PN+GIV E ++ Sbjct: 2 EIGIVGLPNVGKSTLFNAITKAGAECANYPFCTIEPNVGIVSVPDERLDFLSKIEKPQKV 61 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 I A DI G+ K A +G G+G++FL H +L++V E++ + +D + Sbjct: 62 IPATIKFVDIAGLTKGASKGEGLGNKFLSHIREVDAILNVVRCFEDSNIVHVEGSIDPI- 120 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDTLAR---KKNELATQCGQVPFE 306 + +EI+ L I D + + R K ++LA + FE Sbjct: 121 -------RDVEIITLELI-LADMEVIERRLQKTSKLARNDKKAAFE 158 >gi|160914922|ref|ZP_02077136.1| hypothetical protein EUBDOL_00930 [Eubacterium dolichum DSM 3991] gi|158433462|gb|EDP11751.1| hypothetical protein EUBDOL_00930 [Eubacterium dolichum DSM 3991] Length = 384 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+++ + A+YPF T+ PN+G+V K Y Sbjct: 23 GIVGLPNVGKSTLFNAITKSQVEAANYPFATIQPNVGVVEVPDHRLDRLSELFHPKKTIY 82 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F DI G++K A +G G+G++FL + T + H+V ++ Sbjct: 83 TTFEFTDIAGLVKGASKGEGLGNQFLSNIRLTDAICHVVRCFDD 126 >gi|291459283|ref|ZP_06598673.1| GTP-binding protein YchF [Oribacterium sp. oral taxon 078 str. F0262] gi|291418537|gb|EFE92256.1| GTP-binding protein YchF [Oribacterium sp. oral taxon 078 str. F0262] Length = 365 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 30/154 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 +GI+GLPN GKST ++TRA + A+YPF T+ PN+G+V E Y Sbjct: 3 LGIVGLPNVGKSTLFNAITRAGAEAANYPFCTIDPNVGVVAVPDERLHLLSELYHSEKTT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 EF+ DI G++K A +G G+G++FL + T ++H+V E+ +D L Sbjct: 63 PAVIEFV--DIAGLVKGASKGEGLGNQFLSNIRETDAIVHVVRCFEDPNVIHVDGSVDPL 120 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 + IE + L I + D D L R+ +L Sbjct: 121 --------RDIETINLELIFS-DLDLLERRMQKL 145 >gi|294501977|ref|YP_003565677.1| GTP-binding protein EngD [Bacillus megaterium QM B1551] gi|294351914|gb|ADE72243.1| GTP-binding protein EngD [Bacillus megaterium QM B1551] Length = 366 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/107 (38%), Positives = 57/107 (53%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDHRLQKLTELVKPKKTIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 F DI GI+K A +G G+G++FL H + H+V E EN+ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICHVVRCFEDENI 112 >gi|166155188|ref|YP_001653443.1| translation-associated GTPase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|165931176|emb|CAP06741.1| GTP-binding protein [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 366 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 + GI+GLPN GKS ++T A+ +YPF T+ PN+GIV K Sbjct: 7 ECGIVGLPNVGKSGLFNALTGAQVASCNYPFCTIDPNVGIVPVIDPRLETLARISQSQKI 66 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y + DI G++K A GAG+G+RFL H TH + H+V + + Sbjct: 67 IYADMKFVDIAGLVKGAASGAGLGNRFLSHIRETHAIAHVVRCFDND 113 >gi|295707328|ref|YP_003600403.1| GTP-binding protein EngD [Bacillus megaterium DSM 319] gi|294804987|gb|ADF42053.1| GTP-binding protein EngD [Bacillus megaterium DSM 319] Length = 366 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/107 (38%), Positives = 57/107 (53%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDHRLQKLTELVKPKKTIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 F DI GI+K A +G G+G++FL H + H+V E EN+ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICHVVRCFEDENI 112 >gi|170761797|ref|YP_001786875.1| GTP-dependent nucleic acid-binding protein EngD [Clostridium botulinum A3 str. Loch Maree] gi|169408786|gb|ACA57197.1| GTP-binding protein YchF [Clostridium botulinum A3 str. Loch Maree] Length = 365 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V +E Y Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVSVPDKRLDVLEEMYNSKKKV 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF DI G++K A +G G+G++FL H ++H+V E++ Sbjct: 63 PTAIEFY--DIAGLVKGASKGEGLGNKFLSHIREVEAIVHVVRCFEDS 108 >gi|166154313|ref|YP_001654431.1| translation-associated GTPase [Chlamydia trachomatis 434/Bu] gi|301335564|ref|ZP_07223808.1| GTP-dependent nucleic acid-binding protein EngD [Chlamydia trachomatis L2tet1] gi|165930301|emb|CAP03787.1| GTP-binding protein [Chlamydia trachomatis 434/Bu] Length = 366 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 + GI+GLPN GKS ++T A+ +YPF T+ PN+GIV K Sbjct: 7 ECGIVGLPNVGKSGLFNALTGAQVASCNYPFCTIDPNVGIVPVIDPRLETLARISQSQKI 66 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y + DI G++K A GAG+G+RFL H TH + H+V + + Sbjct: 67 IYADMKFVDIAGLVKGAASGAGLGNRFLSHIRETHAIAHVVRCFDND 113 >gi|76788805|ref|YP_327891.1| translation-associated GTPase [Chlamydia trachomatis A/HAR-13] gi|76167335|gb|AAX50343.1| GTP-binding protein, probable translation factor [Chlamydia trachomatis A/HAR-13] Length = 366 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 17/108 (15%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKS ++T A+ +YPF T+ PN+GIV K Sbjct: 6 TECGIVGLPNVGKSGLFNALTGAQVASCNYPFCTIDPNVGIVPVIDSRLETLARISQSQK 65 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y + DI G++K A GAG+G+RFL H TH + H+V + + Sbjct: 66 IIYADMKFVDIAGLVKGAASGAGLGNRFLSHIRETHAIAHVVRCFDND 113 >gi|322434942|ref|YP_004217154.1| GTP-binding protein YchF [Acidobacterium sp. MP5ACTX9] gi|321162669|gb|ADW68374.1| GTP-binding protein YchF [Acidobacterium sp. MP5ACTX9] Length = 366 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 21/103 (20%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 ++GI+GLPN GKST ++T A+ + A+YPF T+ PN+G+V+ Sbjct: 4 NVGIVGLPNVGKSTIFNALTSAEAQAANYPFCTIDPNVGVVQVPDARMDRIVTMVKPDSI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 EF+ DI GI++ A +G G+G++FL H +T +LH+V Sbjct: 64 VPTTMEFV--DIAGIVEGASKGEGLGNQFLSHIRQTDAILHVV 104 >gi|222529619|ref|YP_002573501.1| GTP-dependent nucleic acid-binding protein EngD [Caldicellulosiruptor bescii DSM 6725] gi|222456466|gb|ACM60728.1| GTP-binding protein YchF [Caldicellulosiruptor bescii DSM 6725] Length = 362 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 30/150 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VK 202 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+ V Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVAVPDERLDVLARIYNPEKVT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 + EF+ DI G++K A +G G+G++FL H ++H+V ++ I+ Sbjct: 63 PAFIEFV--DIAGLVKGASKGEGLGNKFLSHIREVDAIVHVVRCFDDT------DIVHVE 114 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 + N R+ IEI+ L I D + L R+ Sbjct: 115 GSVNP--RRDIEIINLELI-FADMEMLERR 141 >gi|24215029|ref|NP_712510.1| GTP-dependent nucleic acid-binding protein EngD [Leptospira interrogans serovar Lai str. 56601] gi|45657485|ref|YP_001571.1| GTP-dependent nucleic acid-binding protein EngD [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24196077|gb|AAN49528.1| translation-associated GTPase [Leptospira interrogans serovar Lai str. 56601] gi|45600724|gb|AAS70208.1| GTP-binding protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 365 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 22/111 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++ +YPF T+ PN GIV+ Sbjct: 4 NCGIVGLPNVGKSTIFNALTKAGAQMENYPFCTIEPNKGIVEVPDLRLNRLAEIAKPQKV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++K A QG G+G++FL H + H+V A E ENV Sbjct: 64 VPAIIEFV--DIAGLVKGASQGEGLGNKFLSHIREVDAICHVVRAFEDENV 112 >gi|295398152|ref|ZP_06808201.1| GTP-binding protein YchF [Aerococcus viridans ATCC 11563] gi|294973671|gb|EFG49449.1| GTP-binding protein YchF [Aerococcus viridans ATCC 11563] Length = 364 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 33/167 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY------- 205 GI+GLPN GKST ++T+++ + A+YPF T+ PN+G+V+ E Y Sbjct: 6 GIVGLPNVGKSTLFNAITKSQVEAANYPFATIDPNVGVVEVPDSRLQTLTEFYVPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE--------NVQAA--- 254 F DI GI+K A +G G+G++FL + ++H+V E+ V A Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIIHVVRCFEDGNITHVSGKVDPADDI 125 Query: 255 ----YQCILDELSAYNSELRKKIEIVGLSQIDT-VDSDTLARKKNEL 296 + IL +L N K +++ D V+++ LA+ K L Sbjct: 126 ETINLELILSDLETVNKRYEKAVKMAKSKDHDAIVEANALAKVKEVL 172 >gi|15604811|ref|NP_219595.1| GTP-dependent nucleic acid-binding protein EngD [Chlamydia trachomatis D/UW-3/CX] gi|237802524|ref|YP_002887718.1| GTP-dependent nucleic acid-binding protein EngD [Chlamydia trachomatis B/Jali20/OT] gi|237804441|ref|YP_002888595.1| GTP-dependent nucleic acid-binding protein EngD [Chlamydia trachomatis B/TZ1A828/OT] gi|255317194|ref|ZP_05358440.1| GTP-dependent nucleic acid-binding protein EngD [Chlamydia trachomatis 6276s] gi|255348454|ref|ZP_05380461.1| GTP-dependent nucleic acid-binding protein EngD [Chlamydia trachomatis 70] gi|255502996|ref|ZP_05381386.1| GTP-dependent nucleic acid-binding protein EngD [Chlamydia trachomatis 70s] gi|3328488|gb|AAC67683.1| GTP Binding Protein [Chlamydia trachomatis D/UW-3/CX] gi|231272741|emb|CAX09645.1| GTP-binding protein [Chlamydia trachomatis B/TZ1A828/OT] gi|231273758|emb|CAX10539.1| GTP-binding protein [Chlamydia trachomatis B/Jali20/OT] gi|289525136|emb|CBJ14608.1| GTP-binding protein [Chlamydia trachomatis Sweden2] gi|296434680|gb|ADH16858.1| GTP-dependent nucleic acid-binding protein EngD [Chlamydia trachomatis E/150] gi|296435609|gb|ADH17783.1| GTP-dependent nucleic acid-binding protein EngD [Chlamydia trachomatis G/9768] gi|296436532|gb|ADH18702.1| GTP-dependent nucleic acid-binding protein EngD [Chlamydia trachomatis G/11222] gi|296437469|gb|ADH19630.1| GTP-dependent nucleic acid-binding protein EngD [Chlamydia trachomatis G/11074] gi|296438397|gb|ADH20550.1| GTP-dependent nucleic acid-binding protein EngD [Chlamydia trachomatis E/11023] gi|297139968|gb|ADH96726.1| GTP-dependent nucleic acid-binding protein EngD [Chlamydia trachomatis G/9301] gi|297748221|gb|ADI50767.1| GTP-binding protein, probable translation factor [Chlamydia trachomatis D-EC] gi|297749101|gb|ADI51779.1| GTP-binding protein, probable translation factor [Chlamydia trachomatis D-LC] Length = 366 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 17/108 (15%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKS ++T A+ +YPF T+ PN+GIV K Sbjct: 6 TECGIVGLPNVGKSGLFNALTGAQVASCNYPFCTIDPNVGIVPVIDPRLETLARISQSQK 65 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y + DI G++K A GAG+G+RFL H TH + H+V + + Sbjct: 66 IIYADMKFVDIAGLVKGAASGAGLGNRFLSHIRETHAIAHVVRCFDND 113 >gi|94985674|ref|YP_605038.1| translation-associated GTPase [Deinococcus geothermalis DSM 11300] gi|94555955|gb|ABF45869.1| GTPase, probable translation factor [Deinococcus geothermalis DSM 11300] Length = 365 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 67/134 (50%), Gaps = 28/134 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++TRA A+YPF T+ PN+G V Sbjct: 5 IGIVGLPNVGKSTLFNAITRAGALAANYPFATIEPNVGRVTVPDERLKALSRVFTRGERV 64 Query: 203 ----EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAY 255 Y EF+ DI G+++ A QG G+G++FL + + H+V E ENV A Sbjct: 65 PPIIPTYVEFV--DIAGLVRGASQGEGLGNQFLANIREVDAIAHVVRCFEDENVVHVAGR 122 Query: 256 QCILDELSAYNSEL 269 LD++ N+EL Sbjct: 123 VDPLDDIETINTEL 136 >gi|310659210|ref|YP_003936931.1| GTP-binding protein [Clostridium sticklandii DSM 519] gi|308825988|emb|CBH22026.1| putative GTP-binding protein [Clostridium sticklandii] Length = 365 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYKEFILA 211 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V E Y+ L Sbjct: 3 LGIVGLPNVGKSTLFNAITQAGAESANYPFCTIEPNVGVVAVPDDRLEKLAELYESKKLV 62 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL H ++H+V E++ Sbjct: 63 PTAIEFYDIAGLVKGASKGEGLGNKFLSHIREVEAIVHVVRCFEDS 108 >gi|255310894|ref|ZP_05353464.1| GTP-dependent nucleic acid-binding protein EngD [Chlamydia trachomatis 6276] gi|255506667|ref|ZP_05382306.1| GTP-dependent nucleic acid-binding protein EngD [Chlamydia trachomatis D(s)2923] Length = 364 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 17/108 (15%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKS ++T A+ +YPF T+ PN+GIV K Sbjct: 4 TECGIVGLPNVGKSGLFNALTGAQVASCNYPFCTIDPNVGIVPVIDPRLETLARISQSQK 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y + DI G++K A GAG+G+RFL H TH + H+V + + Sbjct: 64 IIYADMKFVDIAGLVKGAASGAGLGNRFLSHIRETHAIAHVVRCFDND 111 >gi|313895727|ref|ZP_07829283.1| GTP-binding protein YchF [Selenomonas sp. oral taxon 137 str. F0430] gi|312975853|gb|EFR41312.1| GTP-binding protein YchF [Selenomonas sp. oral taxon 137 str. F0430] Length = 374 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 ++GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 11 EVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVAVPDARLTALTDLYHSKKT 70 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL+H + + H+V E + Sbjct: 71 TPASVRFVDIAGLVKGASKGEGLGNKFLEHIRQVDAVAHVVRCFESS 117 >gi|292671029|ref|ZP_06604455.1| GTP-dependent nucleic acid-binding protein EngD [Selenomonas noxia ATCC 43541] gi|292647346|gb|EFF65318.1| GTP-dependent nucleic acid-binding protein EngD [Selenomonas noxia ATCC 43541] Length = 368 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 ++GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 5 EVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVAVPDGRLKVLTDLYHSKKT 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 DI G++K A +G G+G++FL+H + + H+V E Sbjct: 65 TPASVRFVDIAGLVKGASKGEGLGNKFLEHIRQVDAVAHVVRCFE 109 >gi|238926218|ref|ZP_04657978.1| GTP-binding protein [Selenomonas flueggei ATCC 43531] gi|304436740|ref|ZP_07396708.1| GTP-binding protein YchF [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|238885898|gb|EEQ49536.1| GTP-binding protein [Selenomonas flueggei ATCC 43531] gi|304370220|gb|EFM23877.1| GTP-binding protein YchF [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 368 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 ++GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 5 EVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVAVPDARLKVLTDLYHSKKT 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL+H + + H+V E + Sbjct: 65 TPASVRFVDIAGLVKGASKGEGLGNKFLEHIRQVDAVAHVVRCFESS 111 >gi|29377737|ref|NP_816891.1| GTP-dependent nucleic acid-binding protein EngD [Enterococcus faecalis V583] gi|227518148|ref|ZP_03948197.1| GTP-binding translation factor YchF [Enterococcus faecalis TX0104] gi|227555646|ref|ZP_03985693.1| GTP-binding translation factor YchF [Enterococcus faecalis HH22] gi|229547168|ref|ZP_04435893.1| GTP-binding translation factor YchF [Enterococcus faecalis TX1322] gi|229550738|ref|ZP_04439463.1| GTP-binding translation factor YchF [Enterococcus faecalis ATCC 29200] gi|255971513|ref|ZP_05422099.1| translation-associated GTPase [Enterococcus faecalis T1] gi|255974463|ref|ZP_05425049.1| translation-associated GTPase [Enterococcus faecalis T2] gi|256618564|ref|ZP_05475410.1| translation-associated GTPase [Enterococcus faecalis ATCC 4200] gi|256761818|ref|ZP_05502398.1| translation-associated GTPase [Enterococcus faecalis T3] gi|256854945|ref|ZP_05560306.1| translation-associated GTPase [Enterococcus faecalis T8] gi|256957052|ref|ZP_05561223.1| translation-associated GTPase [Enterococcus faecalis DS5] gi|256960916|ref|ZP_05565087.1| translation-associated GTPase [Enterococcus faecalis Merz96] gi|257078729|ref|ZP_05573090.1| translation-associated GTPase [Enterococcus faecalis JH1] gi|257081311|ref|ZP_05575672.1| translation-associated GTPase [Enterococcus faecalis E1Sol] gi|257083969|ref|ZP_05578330.1| translation-associated GTPase [Enterococcus faecalis Fly1] gi|257087799|ref|ZP_05582160.1| translation-associated GTPase [Enterococcus faecalis D6] gi|257088444|ref|ZP_05582805.1| translation-associated GTPase [Enterococcus faecalis CH188] gi|257417386|ref|ZP_05594380.1| translation-associated GTPase [Enterococcus faecalis AR01/DG] gi|257418877|ref|ZP_05595871.1| translation-associated GTPase [Enterococcus faecalis T11] gi|257421308|ref|ZP_05598298.1| translation-associated GTPase [Enterococcus faecalis X98] gi|293384811|ref|ZP_06630656.1| GTP-binding protein YchF [Enterococcus faecalis R712] gi|293388233|ref|ZP_06632752.1| GTP-binding protein YchF [Enterococcus faecalis S613] gi|294781212|ref|ZP_06746559.1| GTP-binding protein YchF [Enterococcus faecalis PC1.1] gi|300861458|ref|ZP_07107542.1| GTP-binding protein YchF [Enterococcus faecalis TUSoD Ef11] gi|307268875|ref|ZP_07550240.1| GTP-binding protein YchF [Enterococcus faecalis TX4248] gi|307277349|ref|ZP_07558447.1| GTP-binding protein YchF [Enterococcus faecalis TX2134] gi|307283999|ref|ZP_07564169.1| GTP-binding protein YchF [Enterococcus faecalis TX0860] gi|307286505|ref|ZP_07566604.1| GTP-binding protein YchF [Enterococcus faecalis TX0109] gi|307289978|ref|ZP_07569904.1| GTP-binding protein YchF [Enterococcus faecalis TX0411] gi|312901338|ref|ZP_07760619.1| GTP-binding protein YchF [Enterococcus faecalis TX0470] gi|312902985|ref|ZP_07762174.1| GTP-binding protein YchF [Enterococcus faecalis TX0635] gi|312908853|ref|ZP_07767792.1| GTP-binding protein YchF [Enterococcus faecalis DAPTO 512] gi|312952971|ref|ZP_07771827.1| GTP-binding protein YchF [Enterococcus faecalis TX0102] gi|312979504|ref|ZP_07791186.1| GTP-binding protein YchF [Enterococcus faecalis DAPTO 516] gi|29345205|gb|AAO82961.1| GTP-binding protein, GTP1/OBG family [Enterococcus faecalis V583] gi|227074416|gb|EEI12379.1| GTP-binding translation factor YchF [Enterococcus faecalis TX0104] gi|227175223|gb|EEI56195.1| GTP-binding translation factor YchF [Enterococcus faecalis HH22] gi|229304171|gb|EEN70167.1| GTP-binding translation factor YchF [Enterococcus faecalis ATCC 29200] gi|229307750|gb|EEN73737.1| GTP-binding translation factor YchF [Enterococcus faecalis TX1322] gi|255962531|gb|EET95007.1| translation-associated GTPase [Enterococcus faecalis T1] gi|255967335|gb|EET97957.1| translation-associated GTPase [Enterococcus faecalis T2] gi|256598091|gb|EEU17267.1| translation-associated GTPase [Enterococcus faecalis ATCC 4200] gi|256683069|gb|EEU22764.1| translation-associated GTPase [Enterococcus faecalis T3] gi|256709458|gb|EEU24505.1| translation-associated GTPase [Enterococcus faecalis T8] gi|256947548|gb|EEU64180.1| translation-associated GTPase [Enterococcus faecalis DS5] gi|256951412|gb|EEU68044.1| translation-associated GTPase [Enterococcus faecalis Merz96] gi|256986759|gb|EEU74061.1| translation-associated GTPase [Enterococcus faecalis JH1] gi|256989341|gb|EEU76643.1| translation-associated GTPase [Enterococcus faecalis E1Sol] gi|256991999|gb|EEU79301.1| translation-associated GTPase [Enterococcus faecalis Fly1] gi|256995829|gb|EEU83131.1| translation-associated GTPase [Enterococcus faecalis D6] gi|256997256|gb|EEU83776.1| translation-associated GTPase [Enterococcus faecalis CH188] gi|257159214|gb|EEU89174.1| translation-associated GTPase [Enterococcus faecalis ARO1/DG] gi|257160705|gb|EEU90665.1| translation-associated GTPase [Enterococcus faecalis T11] gi|257163132|gb|EEU93092.1| translation-associated GTPase [Enterococcus faecalis X98] gi|291077893|gb|EFE15257.1| GTP-binding protein YchF [Enterococcus faecalis R712] gi|291082380|gb|EFE19343.1| GTP-binding protein YchF [Enterococcus faecalis S613] gi|294451675|gb|EFG20130.1| GTP-binding protein YchF [Enterococcus faecalis PC1.1] gi|295112313|emb|CBL30950.1| GTP-binding protein YchF [Enterococcus sp. 7L76] gi|300848919|gb|EFK76672.1| GTP-binding protein YchF [Enterococcus faecalis TUSoD Ef11] gi|306498972|gb|EFM68464.1| GTP-binding protein YchF [Enterococcus faecalis TX0411] gi|306502378|gb|EFM71655.1| GTP-binding protein YchF [Enterococcus faecalis TX0109] gi|306503370|gb|EFM72619.1| GTP-binding protein YchF [Enterococcus faecalis TX0860] gi|306505983|gb|EFM75155.1| GTP-binding protein YchF [Enterococcus faecalis TX2134] gi|306514791|gb|EFM83341.1| GTP-binding protein YchF [Enterococcus faecalis TX4248] gi|310625291|gb|EFQ08574.1| GTP-binding protein YchF [Enterococcus faecalis DAPTO 512] gi|310629112|gb|EFQ12395.1| GTP-binding protein YchF [Enterococcus faecalis TX0102] gi|310633653|gb|EFQ16936.1| GTP-binding protein YchF [Enterococcus faecalis TX0635] gi|311287686|gb|EFQ66242.1| GTP-binding protein YchF [Enterococcus faecalis DAPTO 516] gi|311291571|gb|EFQ70127.1| GTP-binding protein YchF [Enterococcus faecalis TX0470] gi|315026608|gb|EFT38540.1| GTP-binding protein YchF [Enterococcus faecalis TX2137] gi|315030102|gb|EFT42034.1| GTP-binding protein YchF [Enterococcus faecalis TX4000] gi|315033595|gb|EFT45527.1| GTP-binding protein YchF [Enterococcus faecalis TX0017] gi|315036260|gb|EFT48192.1| GTP-binding protein YchF [Enterococcus faecalis TX0027] gi|315143574|gb|EFT87590.1| GTP-binding protein YchF [Enterococcus faecalis TX2141] gi|315148287|gb|EFT92303.1| GTP-binding protein YchF [Enterococcus faecalis TX4244] gi|315151252|gb|EFT95268.1| GTP-binding protein YchF [Enterococcus faecalis TX0012] gi|315153737|gb|EFT97753.1| GTP-binding protein YchF [Enterococcus faecalis TX0031] gi|315158674|gb|EFU02691.1| GTP-binding protein YchF [Enterococcus faecalis TX0312] gi|315163397|gb|EFU07414.1| GTP-binding protein YchF [Enterococcus faecalis TX0645] gi|315165664|gb|EFU09681.1| GTP-binding protein YchF [Enterococcus faecalis TX1302] gi|315168470|gb|EFU12487.1| GTP-binding protein YchF [Enterococcus faecalis TX1341] gi|315172088|gb|EFU16105.1| GTP-binding protein YchF [Enterococcus faecalis TX1342] gi|315174221|gb|EFU18238.1| GTP-binding protein YchF [Enterococcus faecalis TX1346] gi|315576183|gb|EFU88374.1| GTP-binding protein YchF [Enterococcus faecalis TX0309B] gi|315579762|gb|EFU91953.1| GTP-binding protein YchF [Enterococcus faecalis TX0630] gi|315582994|gb|EFU95185.1| GTP-binding protein YchF [Enterococcus faecalis TX0309A] gi|323479203|gb|ADX78642.1| GTP-dependent nucleic acid-binding protein engD-like protein [Enterococcus faecalis 62] gi|327536394|gb|AEA95228.1| GTP-binding protein YchF [Enterococcus faecalis OG1RF] gi|329577031|gb|EGG58506.1| GTP-binding protein YchF [Enterococcus faecalis TX1467] Length = 371 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 24/131 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDARLQRLTELVKPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-------EENVQAAYQCI 258 F DI GI+K A +G G+G++FL H + + H+V E+N A + Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNQFLSHIRQVDAICHVVRCFDDENIMREQNRDADFVDP 125 Query: 259 LDELSAYNSEL 269 L ++ N EL Sbjct: 126 LADIDTINLEL 136 >gi|330444475|ref|YP_004377461.1| GTP-binding protein YchF [Chlamydophila pecorum E58] gi|328807585|gb|AEB41758.1| GTP-binding protein YchF [Chlamydophila pecorum E58] Length = 364 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 + GI+GLPN GKS ++T A+ +YPF T+ PN+GIV K Sbjct: 5 ECGIVGLPNVGKSGLFNALTGAQVASCNYPFCTIDPNVGIVPVLDKRLEILAEMSQSKKI 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y + DI G++ A GAG+G+RFL H TH + H+V E++ Sbjct: 65 LYADMKFIDIAGLVMGASSGAGLGNRFLSHIRETHAIAHVVRCFEDS 111 >gi|322386428|ref|ZP_08060057.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus cristatus ATCC 51100] gi|321269514|gb|EFX52445.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus cristatus ATCC 51100] Length = 376 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 18/115 (15%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------------- 201 K+++ GI+GLPN GKST ++T+A + A+YPF T+ PN+G V Sbjct: 3 KIRMALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGRVEVPDARLDKLTEL 62 Query: 202 ----KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 K+ F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 63 IKPQKKVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 117 >gi|315155037|gb|EFT99053.1| GTP-binding protein YchF [Enterococcus faecalis TX0043] Length = 371 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 24/131 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDARLQRLTELVKPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-------EENVQAAYQCI 258 F DI GI+K A +G G+G++FL H + + H+V E+N A + Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNQFLSHIRQVDAICHVVRCFDDENIMREQNRDADFVDP 125 Query: 259 LDELSAYNSEL 269 L ++ N EL Sbjct: 126 LADIDTINLEL 136 >gi|332980994|ref|YP_004462435.1| GTP-binding protein YchF [Mahella australiensis 50-1 BON] gi|332698672|gb|AEE95613.1| GTP-binding protein YchF [Mahella australiensis 50-1 BON] Length = 364 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 21/106 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VK 202 +GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+ V Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAEVANYPFCTIEPNMGVVPVPDERLDKLAEIFHPEKVT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 EF DI G++K A +G G+G++FL H ++H+V E Sbjct: 63 PAVVEFF--DIAGLVKGASKGEGLGNKFLSHIREVDAIVHVVRCFE 106 >gi|229082684|ref|ZP_04215138.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus Rock4-2] gi|229181721|ref|ZP_04309044.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus 172560W] gi|228601754|gb|EEK59252.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus 172560W] gi|228700629|gb|EEL53161.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus Rock4-2] Length = 369 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 33/195 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 9 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 68 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 69 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 128 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELATQCGQVPFEFSSITGHGIP- 316 N EL L+ +++VD LAR+K++ A ++ G P Sbjct: 129 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAVYEHEILVRLKEAFEEGKPA 181 Query: 317 QILECLHDKIFSIRG 331 + +E +++ ++G Sbjct: 182 RTVEFTEEQMKVVKG 196 >gi|328945178|gb|EGG39333.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus sanguinis SK1087] Length = 376 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 18/115 (15%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------------- 201 K+++ GI+GLPN GKST ++T+A + A+YPF T+ PN+G V Sbjct: 3 KIRMALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGRVEVPDARLDKLTEL 62 Query: 202 ----KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 K+ F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 63 IKPQKKVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 117 >gi|320537510|ref|ZP_08037454.1| GTP-binding protein YchF [Treponema phagedenis F0421] gi|320145651|gb|EFW37323.1| GTP-binding protein YchF [Treponema phagedenis F0421] Length = 388 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 21/108 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST +++TRA + A+YPF T+ PN+GIV Sbjct: 24 NCGIVGLPNVGKSTIFSALTRAPAEAANYPFCTINPNVGIVSLPDSRLTKLAEHFNPKKV 83 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL H V+ H+V ++ Sbjct: 84 IPATVEFV--DIAGLVKGASKGEGLGNQFLSHIREVGVIAHVVRCFDD 129 >gi|257456166|ref|ZP_05621363.1| GTP-binding protein YchF [Treponema vincentii ATCC 35580] gi|257446252|gb|EEV21298.1| GTP-binding protein YchF [Treponema vincentii ATCC 35580] Length = 368 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 21/108 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK---- 206 + GI+GLPN GKST +++TRA + A+YPF T+ PN+GIV + ++ Sbjct: 4 NCGIVGLPNVGKSTIFSALTRAPAEAANYPFCTINPNIGIVDLPDERLTKLSQAFEPKKT 63 Query: 207 -----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL H V+ H+V ++ Sbjct: 64 IPATVEFV--DIAGLVKGASKGEGLGNQFLSHIREVGVIAHVVRCFDD 109 >gi|256963946|ref|ZP_05568117.1| translation-associated GTPase [Enterococcus faecalis HIP11704] gi|307273950|ref|ZP_07555160.1| GTP-binding protein YchF [Enterococcus faecalis TX0855] gi|256954442|gb|EEU71074.1| translation-associated GTPase [Enterococcus faecalis HIP11704] gi|306509258|gb|EFM78318.1| GTP-binding protein YchF [Enterococcus faecalis TX0855] Length = 371 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 24/131 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDARLQRLTELVKPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-------EENVQAAYQCI 258 F DI GI+K A +G G+G++FL H + + H+V E+N A + Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNQFLSHIRQVDAICHVVRCFDDENIMREQNRDADFVDP 125 Query: 259 LDELSAYNSEL 269 L ++ N EL Sbjct: 126 LADIDTINLEL 136 >gi|322515789|ref|ZP_08068734.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus vestibularis ATCC 49124] gi|322125751|gb|EFX97069.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus vestibularis ATCC 49124] Length = 371 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 21/126 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLTKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV---QAAYQCILDE 261 F DI GI+K A +G G+G++FL + ++H+V A +ENV Q +D Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGREDAFVDP 125 Query: 262 LSAYNS 267 ++ N+ Sbjct: 126 MADINT 131 >gi|293399777|ref|ZP_06643923.1| GTP-binding protein YchF [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306177|gb|EFE47420.1| GTP-binding protein YchF [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 367 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+++ + A+YPF T+ PN+G+V K Y Sbjct: 6 GIVGLPNVGKSTLFNAITKSQVEAANYPFATIQPNVGVVEVPDHRIDRLVELFHPKKTIY 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F DI G++K A +G G+G++FL + T + H+V ++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNQFLSNIRLTDAICHVVRCFDD 109 >gi|325689358|gb|EGD31364.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus sanguinis SK115] gi|327471612|gb|EGF17055.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus sanguinis SK408] gi|327490342|gb|EGF22129.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus sanguinis SK1058] gi|332363610|gb|EGJ41391.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus sanguinis SK1059] gi|332364168|gb|EGJ41945.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus sanguinis SK49] Length = 376 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 18/115 (15%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------------- 201 K+++ GI+GLPN GKST ++T+A + A+YPF T+ PN+G V Sbjct: 3 KIRMALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGRVEVPDARLDKLTEL 62 Query: 202 ----KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 K+ F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 63 IKPQKKVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 117 >gi|323350833|ref|ZP_08086492.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus sanguinis VMC66] gi|322123007|gb|EFX94710.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus sanguinis VMC66] gi|324989582|gb|EGC21528.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus sanguinis SK353] gi|325686481|gb|EGD28510.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus sanguinis SK72] gi|325695764|gb|EGD37663.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus sanguinis SK150] Length = 376 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 18/115 (15%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------------- 201 K+++ GI+GLPN GKST ++T+A + A+YPF T+ PN+G V Sbjct: 3 KIRMALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGRVEVPDARLDKLTEL 62 Query: 202 ----KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 K+ F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 63 IKPQKKVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 117 >gi|312866782|ref|ZP_07726995.1| GTP-binding protein YchF [Streptococcus parasanguinis F0405] gi|311097565|gb|EFQ55796.1| GTP-binding protein YchF [Streptococcus parasanguinis F0405] Length = 377 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 26/139 (18%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------------- 201 K+ L A GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V Sbjct: 6 KMALTA--GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEM 63 Query: 202 ----KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV----- 251 K F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 64 ITPKKTVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQG 123 Query: 252 -QAAYQCILDELSAYNSEL 269 + A+ L ++ N EL Sbjct: 124 REDAFVDPLADIDTINLEL 142 >gi|332365098|gb|EGJ42863.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus sanguinis SK355] Length = 376 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 18/115 (15%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------------- 201 K+++ GI+GLPN GKST ++T+A + A+YPF T+ PN+G V Sbjct: 3 KIRMALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGRVEVPDARLDKLTEL 62 Query: 202 ----KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 K+ F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 63 IKPQKKVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 117 >gi|324991862|gb|EGC23785.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus sanguinis SK405] gi|324996248|gb|EGC28158.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus sanguinis SK678] gi|325698028|gb|EGD39909.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus sanguinis SK160] gi|327458486|gb|EGF04836.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus sanguinis SK1] Length = 376 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 18/115 (15%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------------- 201 K+++ GI+GLPN GKST ++T+A + A+YPF T+ PN+G V Sbjct: 3 KIRMALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGRVEVPDVRLDKLTEL 62 Query: 202 ----KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 K+ F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 63 IKPQKKVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 117 >gi|320528923|ref|ZP_08030015.1| GTP-binding protein YchF [Selenomonas artemidis F0399] gi|320138553|gb|EFW30443.1| GTP-binding protein YchF [Selenomonas artemidis F0399] Length = 381 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 ++GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 18 EVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVAVPDARLTVLTDLYHSKKT 77 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL+H + + H+V E + Sbjct: 78 TPASVRFVDIAGLVKGASKGEGLGNKFLEHIRQVDAVAHVVRCFESS 124 >gi|146296726|ref|YP_001180497.1| translation-associated GTPase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410302|gb|ABP67306.1| GTP-binding protein YchF [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 362 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VK 202 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+ V Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVAVPDERLEVLAKIYNPEKVT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + EF+ DI G++K A +G G+G++FL H ++H+V +++ Sbjct: 63 PAFIEFV--DIAGLVKGASKGEGLGNKFLSHIREVDAIVHVVRCFDDS 108 >gi|297847982|ref|XP_002891872.1| hypothetical protein ARALYDRAFT_474672 [Arabidopsis lyrata subsp. lyrata] gi|297337714|gb|EFH68131.1| hypothetical protein ARALYDRAFT_474672 [Arabidopsis lyrata subsp. lyrata] Length = 421 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 22/138 (15%) Query: 135 NQAPYYANPGILG----QEKIIWLKLKLIADIGIIGLPNAGKST-FLASVTRAKPKIADY 189 NQ + N +G Q++ K+ + GI+GLPN GKST F A V K + A++ Sbjct: 25 NQLLFSGNSKFVGVLTLQKRCFASKVSMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANF 84 Query: 190 PFTTLYPNLGIVK------------EGYKEFILA-----DIPGIIKNAHQGAGIGDRFLK 232 PF T+ PN+GIV G ++ + A DI G++K A QG G+G++FL Sbjct: 85 PFCTIEPNVGIVAVPDSRLQVLSKLSGSQKTVPASIEFVDIAGLVKGASQGEGLGNKFLS 144 Query: 233 HTERTHVLLHIVSALEEN 250 H +L +V E+N Sbjct: 145 HIREVDSILQVVRCFEDN 162 >gi|224475512|ref|YP_002633118.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus carnosus subsp. carnosus TM300] gi|222420119|emb|CAL26933.1| putative GTP-binding protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 365 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDSRLQALSDIVNPKKVIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + +V A ++NV + LD++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDDNVTHVSGRVDPLDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELAT 298 N EL L+ +++VD + +AR+K++ A Sbjct: 126 EVINMELV-------LADLESVDKRLPRLEKMARQKDKDAV 159 >gi|292557470|gb|ADE30471.1| GTP-binding protein [Streptococcus suis GZ1] Length = 377 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFIL------ 210 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ + E I+ Sbjct: 12 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELIIPKKTVP 71 Query: 211 -----ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 72 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 118 >gi|108805012|ref|YP_644949.1| GTP-dependent nucleic acid-binding protein EngD [Rubrobacter xylanophilus DSM 9941] gi|108766255|gb|ABG05137.1| conserved hypothetical protein [Rubrobacter xylanophilus DSM 9941] Length = 369 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--VKEGYKEFI---------- 209 +GI+GLPN GKST ++TRA + +YPFTT+ PN+G+ V +G + + Sbjct: 12 VGIVGLPNVGKSTLFNALTRAGAEAQNYPFTTVDPNVGVAAVPDGRLQRLAEAVGGVRAV 71 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 DI G+++ A +G G+G+RFL H + H+V E ENV Sbjct: 72 PATVEFVDIAGLVRGASRGEGLGNRFLAHIRECDAVAHVVRCFEDENV 119 >gi|289449885|ref|YP_003475171.1| GTP-binding protein YchF [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184432|gb|ADC90857.1| GTP-binding protein YchF [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 364 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYKE---- 207 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V E YK Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVPVPDQRLDFLAEMYKPEKYT 62 Query: 208 ---FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 L DI G++ A +G G+G++FL H + ++H+V ++ Sbjct: 63 PAVLELVDIAGLVAGASRGEGLGNKFLSHIRQVDAIIHVVRCFDD 107 >gi|299820864|ref|ZP_07052753.1| GTP-binding protein YchF [Listeria grayi DSM 20601] gi|299817885|gb|EFI85120.1| GTP-binding protein YchF [Listeria grayi DSM 20601] Length = 366 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGIVEVPDNRLNKLTELVKPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + H+ +EN+ + +D++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVTRCFDDENITHVEGRVDPIDDI 125 Query: 263 SAYNSEL 269 + N EL Sbjct: 126 TTINLEL 132 >gi|15895403|ref|NP_348752.1| GTP-dependent nucleic acid-binding protein EngD [Clostridium acetobutylicum ATCC 824] gi|15025125|gb|AAK80092.1|AE007714_5 Predicted GTPase, YYAF B.subtilis ortholog [Clostridium acetobutylicum ATCC 824] gi|325509549|gb|ADZ21185.1| translation-associated GTPase [Clostridium acetobutylicum EA 2018] Length = 365 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K+ Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVSVPDKRLDVLEKMYNSKKKV 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL H + ++H+V +++ Sbjct: 63 HTSIEFYDIAGLVKGASKGEGLGNKFLSHIRESAAIVHVVRCFKDD 108 >gi|313899138|ref|ZP_07832663.1| GTP-binding protein YchF [Clostridium sp. HGF2] gi|312956078|gb|EFR37721.1| GTP-binding protein YchF [Clostridium sp. HGF2] Length = 367 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+++ + A+YPF T+ PN+G+V K Y Sbjct: 6 GIVGLPNVGKSTLFNAITKSQVEAANYPFATIQPNVGVVEVPDYRIDRLVELFHPKKTIY 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F DI G++K A +G G+G++FL + T + H+V ++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNQFLSNIRLTDAICHVVRCFDD 109 >gi|302389209|ref|YP_003825030.1| GTP-binding protein YchF [Thermosediminibacter oceani DSM 16646] gi|302199837|gb|ADL07407.1| GTP-binding protein YchF [Thermosediminibacter oceani DSM 16646] Length = 364 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 26/156 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 +IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 2 EIGIVGLPNVGKSTLFNAITKAGAECANYPFCTIEPNVGVVAVPDRRLDELAKLENPQKV 61 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 DI G+++ A +G G+G++FL H + H+V E+ +D + Sbjct: 62 TPATIRFVDIAGLVRGASRGEGLGNKFLSHIREVDAIAHVVRCFEDPNVVHVDGSVDPI- 120 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 + IE + L I D +TL R+ + ++ Q Sbjct: 121 -------RDIETINLELI-FADLETLGRRIDRVSKQ 148 >gi|229020700|ref|ZP_04177427.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus AH1273] gi|229026916|ref|ZP_04183239.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus AH1272] gi|228734374|gb|EEL85045.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus AH1272] gi|228740595|gb|EEL90866.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus AH1273] Length = 369 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 9 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 68 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 69 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 128 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 129 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 162 >gi|6056379|gb|AAF02843.1|AC009894_14 Similar to GTP-binding protein [Arabidopsis thaliana] Length = 419 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 22/138 (15%) Query: 135 NQAPYYANPGILG----QEKIIWLKLKLIADIGIIGLPNAGKST-FLASVTRAKPKIADY 189 NQ + N +G Q++ K+ + GI+GLPN GKST F A V K + A++ Sbjct: 25 NQLLFSGNSKFVGVLTLQKRCFSSKVSMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANF 84 Query: 190 PFTTLYPNLGIVK------------EGYKEFILA-----DIPGIIKNAHQGAGIGDRFLK 232 PF T+ PN+GIV G ++ + A DI G++K A QG G+G++FL Sbjct: 85 PFCTIEPNVGIVAVPDSRLQVLSKLSGSQKTVPASIEFVDIAGLVKGASQGEGLGNKFLS 144 Query: 233 HTERTHVLLHIVSALEEN 250 H +L +V E+N Sbjct: 145 HIREVDSILQVVRCFEDN 162 >gi|222152206|ref|YP_002561381.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus uberis 0140J] gi|222113017|emb|CAR40322.1| putative GTP-binding protein [Streptococcus uberis 0140J] Length = 371 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFIL------ 210 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ + E I+ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNIGMVEVPDERLDKLTELIIPKKTVP 65 Query: 211 -----ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|309775265|ref|ZP_07670274.1| GTP-binding protein YchF [Erysipelotrichaceae bacterium 3_1_53] gi|308916928|gb|EFP62659.1| GTP-binding protein YchF [Erysipelotrichaceae bacterium 3_1_53] Length = 367 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+++ + A+YPF T+ PN+G+V K Y Sbjct: 6 GIVGLPNVGKSTLFNAITKSQVEAANYPFATIQPNVGVVEVPDHRIDRLVELFHPKKTIY 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F DI G++K A +G G+G++FL + T + H+V ++ Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNQFLSNIRLTDAICHVVRCFDD 109 >gi|229072940|ref|ZP_04206136.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus F65185] gi|228710186|gb|EEL62164.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus F65185] Length = 366 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 33/195 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELATQCGQVPFEFSSITGHGIP- 316 N EL L+ +++VD LAR+K++ A ++ G P Sbjct: 126 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAVYEHEILVRLKEAFEEGKPA 178 Query: 317 QILECLHDKIFSIRG 331 + +E +++ ++G Sbjct: 179 RTVEFTEEQMKVVKG 193 >gi|21672472|ref|NP_660539.1| translation-associated GTPase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25091702|sp|Q8K9V2|ENGD_BUCAP RecName: Full=GTP-dependent nucleic acid-binding protein engD gi|21623088|gb|AAM67750.1| probable GTP-binding protein In trea-pth [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 362 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 24/129 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GIIGLPN GKST +T+ +A++PF T+ PN+GIV Sbjct: 6 GIIGLPNVGKSTLFNVLTKGNSAVANFPFCTIKPNIGIVSVPDNRINNLSKIILPKKITN 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCILDEL 262 + EF+ DI G++K A +G G+G++FL + TH + H+V ++NV Y + ++ Sbjct: 66 AFIEFV--DIAGLVKGASKGEGLGNQFLSNIRDTHAIAHVVRCFKDDNVSHIYNQLQPKI 123 Query: 263 SA--YNSEL 269 NSEL Sbjct: 124 DVDIINSEL 132 >gi|323442580|gb|EGB00208.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus O46] Length = 365 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 32/160 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDARLLKLEEMVQPKKTLP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQ--AAYQCILDEL 262 F DI GI+K A +G G+G++FL H + +V A ++NV A +D++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDDNVTHVAGRVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELA 297 N EL L+ +++V+ + LAR+K++ A Sbjct: 126 EVINMELV-------LADLESVEKRLPRIEKLARQKDKTA 158 >gi|42562778|ref|NP_176001.2| GTP-binding protein-related [Arabidopsis thaliana] gi|332195215|gb|AEE33336.1| putative GTP-binding protein [Arabidopsis thaliana] Length = 421 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 22/138 (15%) Query: 135 NQAPYYANPGILG----QEKIIWLKLKLIADIGIIGLPNAGKST-FLASVTRAKPKIADY 189 NQ + N +G Q++ K+ + GI+GLPN GKST F A V K + A++ Sbjct: 25 NQLLFSGNSKFVGVLTLQKRCFSSKVSMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANF 84 Query: 190 PFTTLYPNLGIVK------------EGYKEFILA-----DIPGIIKNAHQGAGIGDRFLK 232 PF T+ PN+GIV G ++ + A DI G++K A QG G+G++FL Sbjct: 85 PFCTIEPNVGIVAVPDSRLQVLSKLSGSQKTVPASIEFVDIAGLVKGASQGEGLGNKFLS 144 Query: 233 HTERTHVLLHIVSALEEN 250 H +L +V E+N Sbjct: 145 HIREVDSILQVVRCFEDN 162 >gi|312622163|ref|YP_004023776.1| GTP-binding protein ychf [Caldicellulosiruptor kronotskyensis 2002] gi|312202630|gb|ADQ45957.1| GTP-binding protein YchF [Caldicellulosiruptor kronotskyensis 2002] Length = 362 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VK 202 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+ V Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVAVPDERLDVLARIYNPEKVT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + EF+ DI G++K A +G G+G++FL H ++H+V ++ Sbjct: 63 PAFIEFV--DIAGLVKGASKGEGLGNKFLSHIREVDAIVHVVRCFDDT 108 >gi|228924220|ref|ZP_04087491.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835438|gb|EEM80808.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 126 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 159 >gi|312135392|ref|YP_004002730.1| gtp-binding protein ychf [Caldicellulosiruptor owensensis OL] gi|311775443|gb|ADQ04930.1| GTP-binding protein YchF [Caldicellulosiruptor owensensis OL] Length = 362 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VK 202 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+ V Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVAVPDERLDVLARIYNPEKVT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + EF+ DI G++K A +G G+G++FL H ++H+V ++ Sbjct: 63 PAFIEFV--DIAGLVKGASKGEGLGNKFLSHIREVDAIVHVVRCFDDT 108 >gi|229035133|ref|ZP_04189079.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus AH1271] gi|228728199|gb|EEL79229.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus AH1271] Length = 369 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 9 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 68 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 69 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 128 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 129 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 162 >gi|167641728|ref|ZP_02399971.1| GTP-binding protein YchF [Bacillus anthracis str. A0193] gi|177655282|ref|ZP_02936836.1| GTP-binding protein YchF [Bacillus anthracis str. A0174] gi|254735150|ref|ZP_05192860.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus anthracis str. Western North America USA6153] gi|167510282|gb|EDR85685.1| GTP-binding protein YchF [Bacillus anthracis str. A0193] gi|172080209|gb|EDT65301.1| GTP-binding protein YchF [Bacillus anthracis str. A0174] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDSIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 126 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 159 >gi|153939941|ref|YP_001390800.1| GTP-dependent nucleic acid-binding protein EngD [Clostridium botulinum F str. Langeland] gi|168182381|ref|ZP_02617045.1| GTP-binding protein YchF [Clostridium botulinum Bf] gi|170757373|ref|YP_001781090.1| GTP-dependent nucleic acid-binding protein EngD [Clostridium botulinum B1 str. Okra] gi|237794790|ref|YP_002862342.1| GTP-binding protein YchF [Clostridium botulinum Ba4 str. 657] gi|152935837|gb|ABS41335.1| GTP-binding protein YchF [Clostridium botulinum F str. Langeland] gi|169122585|gb|ACA46421.1| GTP-binding protein YchF [Clostridium botulinum B1 str. Okra] gi|182674281|gb|EDT86242.1| GTP-binding protein YchF [Clostridium botulinum Bf] gi|229262432|gb|ACQ53465.1| GTP-binding protein YchF [Clostridium botulinum Ba4 str. 657] gi|295318870|gb|ADF99247.1| GTP-binding protein YchF [Clostridium botulinum F str. 230613] Length = 365 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA---------- 211 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K + Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVSVPDKRLDVLEKMYNSKKKV 62 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL H ++H+V E++ Sbjct: 63 PTAIEFYDIAGLVKGASKGEGLGNKFLSHIREVEAIVHVVRCFEDS 108 >gi|322377902|ref|ZP_08052390.1| GTP-binding protein YchF [Streptococcus sp. M334] gi|321281078|gb|EFX58090.1| GTP-binding protein YchF [Streptococcus sp. M334] Length = 371 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 24/136 (17%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV---------------- 201 ++ GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V Sbjct: 1 MVLTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITP 60 Query: 202 -KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV------QA 253 K F DI GI+K A +G G+G++FL + ++H+V A +ENV + Sbjct: 61 KKTVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGRED 120 Query: 254 AYQCILDELSAYNSEL 269 A+ L ++ N EL Sbjct: 121 AFVDPLADIDTINLEL 136 >gi|301056949|ref|YP_003795160.1| GTP-binding protein YchF [Bacillus anthracis CI] gi|300379118|gb|ADK08022.1| conserved GTP-binding protein YchF [Bacillus cereus biovar anthracis str. CI] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 126 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 159 >gi|253750929|ref|YP_003024070.1| GTP-binding protein [Streptococcus suis SC84] gi|253752828|ref|YP_003025968.1| GTP-binding protein [Streptococcus suis P1/7] gi|253754653|ref|YP_003027793.1| GTP-binding protein [Streptococcus suis BM407] gi|251815218|emb|CAZ50782.1| putative GTP-binding protein [Streptococcus suis SC84] gi|251817117|emb|CAZ54838.1| putative GTP-binding protein [Streptococcus suis BM407] gi|251819073|emb|CAR44087.1| putative GTP-binding protein [Streptococcus suis P1/7] gi|319757178|gb|ADV69120.1| GTP-binding protein [Streptococcus suis JS14] Length = 371 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFIL------ 210 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ + E I+ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELIIPKKTVP 65 Query: 211 -----ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|229099902|ref|ZP_04230825.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus Rock3-29] gi|229106067|ref|ZP_04236682.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus Rock3-28] gi|228677353|gb|EEL31615.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus Rock3-28] gi|228683517|gb|EEL37472.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus Rock3-29] Length = 369 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 9 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 68 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 69 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 128 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 129 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 162 >gi|229065134|ref|ZP_04200427.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus AH603] gi|229136300|ref|ZP_04265047.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus BDRD-ST196] gi|229170178|ref|ZP_04297864.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus AH621] gi|228613279|gb|EEK70418.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus AH621] gi|228647172|gb|EEL03260.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus BDRD-ST196] gi|228716163|gb|EEL67882.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus AH603] Length = 369 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 9 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 68 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 69 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 128 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 129 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 162 >gi|229176151|ref|ZP_04303643.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus MM3] gi|228607310|gb|EEK64640.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus MM3] Length = 369 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 9 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 68 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 69 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 128 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 129 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 162 >gi|302871602|ref|YP_003840238.1| GTP-binding protein YchF [Caldicellulosiruptor obsidiansis OB47] gi|302574461|gb|ADL42252.1| GTP-binding protein YchF [Caldicellulosiruptor obsidiansis OB47] Length = 362 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VK 202 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+ V Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVAVPDERLDILARIYNPEKVT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + EF+ DI G++K A +G G+G++FL H ++H+V ++ Sbjct: 63 PAFIEFV--DIAGLVKGASKGEGLGNKFLSHIREVDAIVHVVRCFDDT 108 >gi|322805769|emb|CBZ03334.1| GTP-binding and nucleic acid-binding protein YchF [Clostridium botulinum H04402 065] Length = 365 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA---------- 211 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K + Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVSVPDKRLDVLEKMYNSKKKV 62 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL H ++H+V E++ Sbjct: 63 PTAIEFYDIAGLVKGASKGEGLGNKFLSHIREVEAIVHVVRCFEDS 108 >gi|187779896|ref|ZP_02996369.1| hypothetical protein CLOSPO_03492 [Clostridium sporogenes ATCC 15579] gi|187773521|gb|EDU37323.1| hypothetical protein CLOSPO_03492 [Clostridium sporogenes ATCC 15579] Length = 365 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA---------- 211 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K + Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVSVPDKRLDVLEKMYNSKKKV 62 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL H ++H+V E++ Sbjct: 63 PTAIEFYDIAGLVKGASKGEGLGNKFLSHIREVEAIVHVVRCFEDS 108 >gi|168180110|ref|ZP_02614774.1| GTP-binding protein YchF [Clostridium botulinum NCTC 2916] gi|182668960|gb|EDT80936.1| GTP-binding protein YchF [Clostridium botulinum NCTC 2916] Length = 365 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA---------- 211 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K + Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVSVPDKRLDVLEKMYNSKKKV 62 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL H ++H+V E++ Sbjct: 63 PTAIEFYDIAGLVKGASKGEGLGNKFLSHIREVEAIVHVVRCFEDS 108 >gi|148379424|ref|YP_001253965.1| GTP-binding protein YchF [Clostridium botulinum A str. ATCC 3502] gi|153931199|ref|YP_001383803.1| GTP-dependent nucleic acid-binding protein EngD [Clostridium botulinum A str. ATCC 19397] gi|153937204|ref|YP_001387353.1| GTP-dependent nucleic acid-binding protein EngD [Clostridium botulinum A str. Hall] gi|226948788|ref|YP_002803879.1| GTP-binding protein YchF [Clostridium botulinum A2 str. Kyoto] gi|148288908|emb|CAL82995.1| putative GTP-binding protein [Clostridium botulinum A str. ATCC 3502] gi|152927243|gb|ABS32743.1| GTP-binding protein YchF [Clostridium botulinum A str. ATCC 19397] gi|152933118|gb|ABS38617.1| GTP-binding protein YchF [Clostridium botulinum A str. Hall] gi|226841555|gb|ACO84221.1| GTP-binding protein YchF [Clostridium botulinum A2 str. Kyoto] Length = 365 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA---------- 211 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K + Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVSVPDKRLDVLEKMYNSKKKV 62 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL H ++H+V E++ Sbjct: 63 PTAIEFYDIAGLVKGASKGEGLGNKFLSHIREVEAIVHVVRCFEDS 108 >gi|220928042|ref|YP_002504951.1| GTP-dependent nucleic acid-binding protein EngD [Clostridium cellulolyticum H10] gi|219998370|gb|ACL74971.1| GTP-binding protein YchF [Clostridium cellulolyticum H10] Length = 365 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 +GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV + Y Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGIVAVPDERLDTLTKMYNPDKTT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL H ++H+V E++ Sbjct: 63 PTVIEFV--DIAGLVKGASKGEGLGNKFLSHIREVDAIVHVVRCFEDS 108 >gi|258424584|ref|ZP_05687461.1| GTP-binding protein YchF [Staphylococcus aureus A9635] gi|257845179|gb|EEV69216.1| GTP-binding protein YchF [Staphylococcus aureus A9635] Length = 365 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 32/160 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDARLLKLEEMVQPKKTLP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQ--AAYQCILDEL 262 F DI GI+K A +G G+G++FL H + +V A ++NV A +D++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDDNVTHVAGRVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELA 297 N EL L+ +++V+ + LAR+K++ A Sbjct: 126 EVINMELV-------LADLESVEKRLPRIEKLARQKDKTA 158 >gi|73663684|ref|YP_302465.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72496199|dbj|BAE19520.1| putative GTPase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 365 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 32/158 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDSRLDVLTKMVQPKKTIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + +V A ++NV + +D++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDDNVTHVSGRVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNE 295 N EL L+ +++VD + +AR+K++ Sbjct: 126 EVINMELV-------LADLESVDKRLPKVEKMARQKDK 156 >gi|13507765|ref|NP_109714.1| translation-associated GTPase [Mycoplasma pneumoniae M129] gi|2495122|sp|P75088|Y026_MYCPN RecName: Full=Probable GTP-binding protein MG024 homolog gi|1673787|gb|AAB95776.1| GTPase-like protein [Mycoplasma pneumoniae M129] Length = 362 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 21/136 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST +++T + +IA+YPF T+ PN GIV K + Sbjct: 5 GIVGLPNVGKSTLFSAITNLQVEIANYPFATIEPNAGIVNVIDERLDKLASLIKPDKVTH 64 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDE 261 F DI G++K A +G G+G++FL + ++ H+V E+ +V + D Sbjct: 65 TTFRFVDIAGLVKGASKGEGLGNQFLANIREVDLICHVVRCYEDKKIVHVNNQVDPVFDF 124 Query: 262 LSAYNSELRKKIEIVG 277 N ++ IE+V Sbjct: 125 EIIVNELIQADIEVVN 140 >gi|301633323|gb|ADK86877.1| GTP-binding protein YchF [Mycoplasma pneumoniae FH] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 21/136 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST +++T + +IA+YPF T+ PN GIV K + Sbjct: 5 GIVGLPNVGKSTLFSAITNLQVEIANYPFATIEPNAGIVNVIDERLDKLASLIKPDKVTH 64 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDE 261 F DI G++K A +G G+G++FL + ++ H+V E+ +V + D Sbjct: 65 TTFRFVDIAGLVKGASKGEGLGNQFLANIREVDLICHVVRCYEDKKIVHVNNQVDPVFDF 124 Query: 262 LSAYNSELRKKIEIVG 277 N ++ IE+V Sbjct: 125 EIIVNELIQADIEVVN 140 >gi|229000264|ref|ZP_04159833.1| GTP-dependent nucleic acid-binding protein engD [Bacillus mycoides Rock3-17] gi|229007788|ref|ZP_04165374.1| GTP-dependent nucleic acid-binding protein engD [Bacillus mycoides Rock1-4] gi|228753465|gb|EEM02917.1| GTP-dependent nucleic acid-binding protein engD [Bacillus mycoides Rock1-4] gi|228759596|gb|EEM08573.1| GTP-dependent nucleic acid-binding protein engD [Bacillus mycoides Rock3-17] Length = 369 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 9 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 68 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 69 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 128 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 129 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 162 >gi|163943155|ref|YP_001648039.1| translation-associated GTPase [Bacillus weihenstephanensis KBAB4] gi|163865352|gb|ABY46411.1| GTP-binding protein YchF [Bacillus weihenstephanensis KBAB4] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 126 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 159 >gi|283469670|emb|CAQ48881.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus ST398] Length = 365 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 32/160 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDARLLKLEEMVQPKKTLP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQ--AAYQCILDEL 262 F DI GI+K A +G G+G++FL H + +V A ++NV A +D++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDDNVTHVAGRVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELA 297 N EL L+ +++V+ + LAR+K++ A Sbjct: 126 EVINMELV-------LADLESVEKRLPRIEKLARQKDKTA 158 >gi|228905419|ref|ZP_04069374.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis IBL 4222] gi|228854239|gb|EEM98942.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis IBL 4222] Length = 369 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 9 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 68 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 69 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 128 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 129 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 162 >gi|118480503|ref|YP_897654.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus thuringiensis str. Al Hakam] gi|228936755|ref|ZP_04099546.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228988703|ref|ZP_04148788.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229124978|ref|ZP_04254152.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus 95/8201] gi|229187704|ref|ZP_04314840.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus BGSC 6E1] gi|118419728|gb|ABK88147.1| GTP-binding protein [Bacillus thuringiensis str. Al Hakam] gi|228595772|gb|EEK53456.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus BGSC 6E1] gi|228658479|gb|EEL14145.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus 95/8201] gi|228771015|gb|EEM19496.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228822964|gb|EEM68805.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 369 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 9 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 68 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 69 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 128 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 129 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 162 >gi|302332100|gb|ADL22293.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus subsp. aureus JKD6159] Length = 365 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 32/160 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDARLLKLEEMVQPKKTLP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQ--AAYQCILDEL 262 F DI GI+K A +G G+G++FL H + +V A ++NV A +D++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDDNVTHVAGRVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELA 297 N EL L+ +++V+ + LAR+K++ A Sbjct: 126 EVINMELV-------LADLESVEKRLPRIEKLARQKDKTA 158 >gi|312793829|ref|YP_004026752.1| gtp-binding protein ychf [Caldicellulosiruptor kristjanssonii 177R1B] gi|312877459|ref|ZP_07737422.1| GTP-binding protein YchF [Caldicellulosiruptor lactoaceticus 6A] gi|311795780|gb|EFR12146.1| GTP-binding protein YchF [Caldicellulosiruptor lactoaceticus 6A] gi|312180969|gb|ADQ41139.1| GTP-binding protein YchF [Caldicellulosiruptor kristjanssonii 177R1B] Length = 362 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VK 202 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+ V Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVAVPDERLDVLAKIYNPEKVT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + EF+ DI G++K A +G G+G++FL H ++H+V ++ Sbjct: 63 PAFIEFV--DIAGLVKGASKGEGLGNKFLSHIREVDAIVHVVRCFDDT 108 >gi|312127334|ref|YP_003992208.1| gtp-binding protein ychf [Caldicellulosiruptor hydrothermalis 108] gi|311777353|gb|ADQ06839.1| GTP-binding protein YchF [Caldicellulosiruptor hydrothermalis 108] Length = 362 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VK 202 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+ V Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVAVPDERLDVLAKIYNPEKVT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + EF+ DI G++K A +G G+G++FL H ++H+V ++ Sbjct: 63 PAFIEFV--DIAGLVKGASKGEGLGNKFLSHIREVDAIVHVVRCFDDT 108 >gi|228961739|ref|ZP_04123342.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar pakistani str. T13001] gi|228797933|gb|EEM44943.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar pakistani str. T13001] Length = 369 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 9 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 68 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 69 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 128 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 129 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 162 >gi|222152191|ref|YP_002561351.1| GTP-binding protein [Macrococcus caseolyticus JCSC5402] gi|222121320|dbj|BAH18655.1| GTP-binding protein [Macrococcus caseolyticus JCSC5402] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDHRLNKLTELVEPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + +V A E EN+ + +D++ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFEDENITHVSGKVNPVDDI 125 Query: 263 SAYNSEL 269 N EL Sbjct: 126 EVINMEL 132 >gi|124512296|ref|XP_001349281.1| GTP binding protein, putative [Plasmodium falciparum 3D7] gi|23499050|emb|CAD51130.1| GTP binding protein, putative [Plasmodium falciparum 3D7] Length = 773 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 73/264 (27%), Positives = 125/264 (47%), Gaps = 37/264 (14%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F D V +SG GG +R K ++ G GG GG+V +++ ++ LI + Sbjct: 244 RFCDFLWVTTKSGKGGNPNYKKQRSKKLK----GEGYGGHGGNVILKSKKSIYDLI--KI 297 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQR------- 114 +Q KA +GE K N G G+D ++ VPVGT V + + C + E R Sbjct: 298 EQKVKANNGE-DFKENSRGKDGKDKIIFVPVGTIVRKR----ISCKIKNENNRKIYKSIF 352 Query: 115 ----------IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 +++A GG GG +HFK + P + +L E +L+ D+ Sbjct: 353 WYQFLNENEELLVARGGKGGISYSHFKKHDYRLPEKSETTLLELEL------RLLNDVAF 406 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQ 222 IG+ N+GK++ +S+++ I FTT P++ + +G E L D P + NAH+ Sbjct: 407 IGIENSGKTSLCSSLSKYLGNINSNTFTTTIPHVSNINYVDGV-EITLLDTPYLFFNAHK 465 Query: 223 GAGIGDRFLKHTERTHVLLHIVSA 246 G R L+H R+ ++++++ Sbjct: 466 DKNKGKRILRHLYRSKLIVYVIDV 489 >gi|15616810|ref|NP_240022.1| translation-associated GTPase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681563|ref|YP_002467949.1| GTP-binding protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682121|ref|YP_002468505.1| GTP-binding protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471248|ref|ZP_05635247.1| GTP-dependent nucleic acid-binding protein EngD [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|14286041|sp|P57288|ENGD_BUCAI RecName: Full=GTP-dependent nucleic acid-binding protein engD gi|25330204|pir||D84952 GTP-binding protein [imported] - Buchnera sp. (strain APS) gi|10038873|dbj|BAB12908.1| GTP-binding protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219621854|gb|ACL30010.1| GTP-binding protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624406|gb|ACL30561.1| GTP-binding protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311085933|gb|ADP66015.1| GTP-dependent nucleic acid-binding protein EngD [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086505|gb|ADP66586.1| GTP-dependent nucleic acid-binding protein EngD [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087086|gb|ADP67166.1| GTP-dependent nucleic acid-binding protein EngD [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087638|gb|ADP67717.1| GTP-dependent nucleic acid-binding protein EngD [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 362 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 24/129 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GIIGLPN GKST +T+ +A++PF T+ PN+GIV Sbjct: 6 GIIGLPNVGKSTLFNLLTKGNSAVANFPFCTIKPNIGIVPVIDERINNLNQIVSPQKTVN 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LD 260 + EFI DI G++K A QG G+G++FL + H + H+V ++N+ Y + + Sbjct: 66 AFIEFI--DIAGLVKGASQGEGLGNQFLGNIRDVHAIAHVVRCFKDDNITHIYNQVQPIK 123 Query: 261 ELSAYNSEL 269 ++ NSEL Sbjct: 124 DIDIINSEL 132 >gi|228994194|ref|ZP_04154094.1| GTP-dependent nucleic acid-binding protein engD [Bacillus pseudomycoides DSM 12442] gi|228765646|gb|EEM14300.1| GTP-dependent nucleic acid-binding protein engD [Bacillus pseudomycoides DSM 12442] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 126 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 159 >gi|229164426|ref|ZP_04292354.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus R309803] gi|228619031|gb|EEK75929.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus R309803] Length = 369 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 9 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 68 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 69 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 128 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 129 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 162 >gi|146319856|ref|YP_001199567.1| GTPase, translation factor [Streptococcus suis 98HAH33] gi|145690662|gb|ABP91167.1| Predicted GTPase, probable translation factor [Streptococcus suis 98HAH33] Length = 292 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFIL------ 210 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ + E I+ Sbjct: 12 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELIIPKKTVP 71 Query: 211 -----ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 72 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 118 >gi|72080631|ref|YP_287689.1| GTP-dependent nucleic acid-binding protein EngD [Mycoplasma hyopneumoniae 7448] gi|71913755|gb|AAZ53666.1| GTP-binding protein YchF [Mycoplasma hyopneumoniae 7448] Length = 367 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 79/166 (47%), Gaps = 29/166 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 G+IGLPN GKS+ +++T+ +IA+YPF T+ PN+ V K + Sbjct: 6 GLIGLPNVGKSSLFSALTKMNVEIANYPFATIEPNIATVEIHDPRILQLTKIVKPEKTVF 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDE 261 + DI G+IK A G G+G++FL + L+HIV ++ +V I D Sbjct: 66 ATYSFVDIAGLIKGASTGEGLGNKFLANVRNVDCLVHIVRCFQDPKIIHVNNEINPIFD- 124 Query: 262 LSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF 307 + N EL L I T+ S LA+K N T QV FEF Sbjct: 125 IQTINLELI----FADLGTIQTIIS-RLAKKANN--TNDKQVKFEF 163 >gi|15923353|ref|NP_370887.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus subsp. aureus Mu50] gi|15926064|ref|NP_373597.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus subsp. aureus N315] gi|21282068|ref|NP_645156.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus subsp. aureus MW2] gi|49482593|ref|YP_039817.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus subsp. aureus MRSA252] gi|49485243|ref|YP_042464.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus subsp. aureus MSSA476] gi|57652623|ref|YP_185326.1| translation-associated GTPase [Staphylococcus aureus subsp. aureus COL] gi|87160850|ref|YP_493078.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194145|ref|YP_498935.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148266850|ref|YP_001245793.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus subsp. aureus JH9] gi|150392896|ref|YP_001315571.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus subsp. aureus JH1] gi|151220567|ref|YP_001331389.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus subsp. aureus str. Newman] gi|156978691|ref|YP_001440950.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus subsp. aureus Mu3] gi|161508634|ref|YP_001574293.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142671|ref|ZP_03567164.1| translation-associated GTPase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253316536|ref|ZP_04839749.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253730726|ref|ZP_04864891.1| GTP-binding protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253735105|ref|ZP_04869270.1| GTP-binding protein [Staphylococcus aureus subsp. aureus TCH130] gi|255005158|ref|ZP_05143759.2| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257424507|ref|ZP_05600936.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus 55/2053] gi|257427176|ref|ZP_05603578.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus 65-1322] gi|257429812|ref|ZP_05606199.1| translation-associated GTPase [Staphylococcus aureus subsp. aureus 68-397] gi|257432516|ref|ZP_05608879.1| translation-associated GTPase [Staphylococcus aureus subsp. aureus E1410] gi|257435418|ref|ZP_05611469.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus M876] gi|257794198|ref|ZP_05643177.1| GTP-binding protein YchF [Staphylococcus aureus A9781] gi|258413517|ref|ZP_05681792.1| translation-associated GTPase [Staphylococcus aureus A9763] gi|258421359|ref|ZP_05684286.1| GTP-binding protein YchF [Staphylococcus aureus A9719] gi|258436940|ref|ZP_05689280.1| translation-associated GTPase [Staphylococcus aureus A9299] gi|258444343|ref|ZP_05692677.1| translation-associated GTPase [Staphylococcus aureus A8115] gi|258444880|ref|ZP_05693201.1| translation-associated GTPase [Staphylococcus aureus A6300] gi|258448085|ref|ZP_05696214.1| translation-associated GTPase [Staphylococcus aureus A6224] gi|258453044|ref|ZP_05701037.1| translation-associated GTPase [Staphylococcus aureus A5948] gi|258455918|ref|ZP_05703873.1| translation-associated GTPase [Staphylococcus aureus A5937] gi|262048925|ref|ZP_06021805.1| hypothetical protein SAD30_0771 [Staphylococcus aureus D30] gi|262052850|ref|ZP_06025035.1| hypothetical protein SA930_1148 [Staphylococcus aureus 930918-3] gi|269202011|ref|YP_003281280.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus subsp. aureus ED98] gi|282893523|ref|ZP_06301756.1| GTP-binding protein YchF [Staphylococcus aureus A8117] gi|282902948|ref|ZP_06310841.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus C160] gi|282907346|ref|ZP_06315194.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus Btn1260] gi|282907689|ref|ZP_06315531.1| translation-associated GTPase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282912596|ref|ZP_06320392.1| translation-associated GTPase [Staphylococcus aureus subsp. aureus WBG10049] gi|282913221|ref|ZP_06321013.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus M899] gi|282915685|ref|ZP_06323456.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus D139] gi|282921660|ref|ZP_06329378.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus C427] gi|282922336|ref|ZP_06330027.1| GTP-binding protein YchF [Staphylococcus aureus A9765] gi|282922848|ref|ZP_06330538.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus C101] gi|282927417|ref|ZP_06335035.1| GTP-binding protein YchF [Staphylococcus aureus A10102] gi|283768091|ref|ZP_06341006.1| ychF translation-associated GTPase [Staphylococcus aureus subsp. aureus H19] gi|283959801|ref|ZP_06377242.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus A017934/97] gi|284023372|ref|ZP_06377770.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus subsp. aureus 132] gi|293498270|ref|ZP_06666124.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus 58-424] gi|293509211|ref|ZP_06667929.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus M809] gi|293550475|ref|ZP_06673147.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus M1015] gi|294850011|ref|ZP_06790749.1| GTP-binding protein YchF [Staphylococcus aureus A9754] gi|295405635|ref|ZP_06815445.1| GTP-binding protein YchF [Staphylococcus aureus A8819] gi|295426897|ref|ZP_06819536.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus EMRSA16] gi|296275190|ref|ZP_06857697.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus subsp. aureus MR1] gi|297209124|ref|ZP_06925523.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245542|ref|ZP_06929410.1| GTP-binding protein YchF [Staphylococcus aureus A8796] gi|297588891|ref|ZP_06947532.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus MN8] gi|300911125|ref|ZP_07128574.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus TCH70] gi|304380328|ref|ZP_07363048.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|13700277|dbj|BAB41575.1| SA0351 [Staphylococcus aureus subsp. aureus N315] gi|14246131|dbj|BAB56525.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus Mu50] gi|21203504|dbj|BAB94204.1| MW0339 [Staphylococcus aureus subsp. aureus MW2] gi|49240722|emb|CAG39383.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus MRSA252] gi|49243686|emb|CAG42110.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57286809|gb|AAW38903.1| conserved hypothetical protein TIGR00092 [Staphylococcus aureus subsp. aureus COL] gi|87126824|gb|ABD21338.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201703|gb|ABD29513.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147739919|gb|ABQ48217.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus JH9] gi|149945348|gb|ABR51284.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus JH1] gi|150373367|dbj|BAF66627.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus str. Newman] gi|156720826|dbj|BAF77243.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|160367443|gb|ABX28414.1| possible GTP-binding protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253725570|gb|EES94299.1| GTP-binding protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253726905|gb|EES95634.1| GTP-binding protein [Staphylococcus aureus subsp. aureus TCH130] gi|257273525|gb|EEV05627.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus 55/2053] gi|257276807|gb|EEV08258.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus 65-1322] gi|257280293|gb|EEV10880.1| translation-associated GTPase [Staphylococcus aureus subsp. aureus 68-397] gi|257283395|gb|EEV13527.1| translation-associated GTPase [Staphylococcus aureus subsp. aureus E1410] gi|257286014|gb|EEV16130.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus M876] gi|257788170|gb|EEV26510.1| GTP-binding protein YchF [Staphylococcus aureus A9781] gi|257839764|gb|EEV64233.1| translation-associated GTPase [Staphylococcus aureus A9763] gi|257842783|gb|EEV67205.1| GTP-binding protein YchF [Staphylococcus aureus A9719] gi|257848731|gb|EEV72718.1| translation-associated GTPase [Staphylococcus aureus A9299] gi|257850602|gb|EEV74550.1| translation-associated GTPase [Staphylococcus aureus A8115] gi|257856198|gb|EEV79112.1| translation-associated GTPase [Staphylococcus aureus A6300] gi|257858600|gb|EEV81474.1| translation-associated GTPase [Staphylococcus aureus A6224] gi|257859254|gb|EEV82109.1| translation-associated GTPase [Staphylococcus aureus A5948] gi|257862130|gb|EEV84903.1| translation-associated GTPase [Staphylococcus aureus A5937] gi|259159251|gb|EEW44310.1| hypothetical protein SA930_1148 [Staphylococcus aureus 930918-3] gi|259162997|gb|EEW47559.1| hypothetical protein SAD30_0771 [Staphylococcus aureus D30] gi|262074301|gb|ACY10274.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus subsp. aureus ED98] gi|269939943|emb|CBI48315.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus TW20] gi|282315069|gb|EFB45455.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus C101] gi|282316075|gb|EFB46459.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus C427] gi|282320501|gb|EFB50840.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus D139] gi|282323321|gb|EFB53640.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus M899] gi|282324292|gb|EFB54608.1| translation-associated GTPase [Staphylococcus aureus subsp. aureus WBG10049] gi|282328594|gb|EFB58865.1| translation-associated GTPase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330245|gb|EFB59766.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus Btn1260] gi|282590741|gb|EFB95817.1| GTP-binding protein YchF [Staphylococcus aureus A10102] gi|282593462|gb|EFB98457.1| GTP-binding protein YchF [Staphylococcus aureus A9765] gi|282597407|gb|EFC02366.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus C160] gi|282764209|gb|EFC04336.1| GTP-binding protein YchF [Staphylococcus aureus A8117] gi|283461970|gb|EFC09054.1| ychF translation-associated GTPase [Staphylococcus aureus subsp. aureus H19] gi|283789393|gb|EFC28220.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus A017934/97] gi|285816085|gb|ADC36572.1| GTP-binding and nucleic acid-binding protein YchF [Staphylococcus aureus 04-02981] gi|290919522|gb|EFD96598.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus M1015] gi|291097201|gb|EFE27459.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus 58-424] gi|291467963|gb|EFF10471.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus M809] gi|294823145|gb|EFG39576.1| GTP-binding protein YchF [Staphylococcus aureus A9754] gi|294969710|gb|EFG45729.1| GTP-binding protein YchF [Staphylococcus aureus A8819] gi|295129349|gb|EFG58976.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus EMRSA16] gi|296886057|gb|EFH24991.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177528|gb|EFH36779.1| GTP-binding protein YchF [Staphylococcus aureus A8796] gi|297577402|gb|EFH96115.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus MN8] gi|298693701|gb|ADI96923.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ED133] gi|300887304|gb|EFK82500.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus TCH70] gi|302750235|gb|ADL64412.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341309|gb|EFM07228.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312436523|gb|ADQ75594.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus TCH60] gi|312828885|emb|CBX33727.1| GTP-dependent nucleic acid-binding protein engD [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130010|gb|EFT85999.1| translation-associated GTPase [Staphylococcus aureus subsp. aureus CGS03] gi|315194822|gb|EFU25211.1| translation-associated GTPase [Staphylococcus aureus subsp. aureus CGS00] gi|315198044|gb|EFU28376.1| translation-associated GTPase [Staphylococcus aureus subsp. aureus CGS01] gi|320139329|gb|EFW31208.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus MRSA131] gi|320142879|gb|EFW34675.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus MRSA177] gi|323438823|gb|EGA96561.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus O11] gi|329313056|gb|AEB87469.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus T0131] gi|329724230|gb|EGG60743.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus 21189] gi|329725875|gb|EGG62354.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus 21172] gi|329732584|gb|EGG68934.1| GTP-binding protein YchF [Staphylococcus aureus subsp. aureus 21193] Length = 365 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 32/160 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDARLLKLEEMVQPKKTLP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQ--AAYQCILDEL 262 F DI GI+K A +G G+G++FL H + +V A ++NV A +D++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDDNVTHVAGRVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELA 297 N EL L+ +++V+ + LAR+K++ A Sbjct: 126 EVINMELV-------LADLESVEKRLPRIEKLARQKDKTA 158 >gi|42784671|ref|NP_981918.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus cereus ATCC 10987] gi|42740603|gb|AAS44526.1| GTP-binding protein YchF [Bacillus cereus ATCC 10987] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 126 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 159 >gi|310644401|ref|YP_003949160.1| gtpase translation factor-like protein [Paenibacillus polymyxa SC2] gi|309249352|gb|ADO58919.1| GTPase probable translation factor-like protein [Paenibacillus polymyxa SC2] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 21/149 (14%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLDKLTELVVPNKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 F DI G+++ A +G G+G++FL H ++H+V E+ +D +S Sbjct: 66 TAFEFVDIAGLVRGASKGEGLGNKFLAHIREVDAIVHVVRCFEDENITHVDGKIDPISDI 125 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKN 294 + +E++ L+ I++VD +KN Sbjct: 126 QT---INLELI-LADIESVDKRIERSRKN 150 >gi|229159035|ref|ZP_04287091.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus ATCC 4342] gi|228624454|gb|EEK81225.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus ATCC 4342] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 126 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 159 >gi|229014641|ref|ZP_04171755.1| GTP-dependent nucleic acid-binding protein engD [Bacillus mycoides DSM 2048] gi|228746652|gb|EEL96541.1| GTP-dependent nucleic acid-binding protein engD [Bacillus mycoides DSM 2048] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 126 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 159 >gi|55820107|ref|YP_138549.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus thermophilus LMG 18311] gi|55821997|ref|YP_140438.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus thermophilus CNRZ1066] gi|55736092|gb|AAV59734.1| GTP-binding protein [Streptococcus thermophilus LMG 18311] gi|55737982|gb|AAV61623.1| GTP-binding protein [Streptococcus thermophilus CNRZ1066] Length = 371 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLTKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIIHVVRAFDDENV 112 >gi|30023499|ref|NP_835130.1| translation-associated GTPase [Bacillus cereus ATCC 14579] gi|218234290|ref|YP_002370250.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus cereus B4264] gi|229051144|ref|ZP_04194688.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus AH676] gi|229112888|ref|ZP_04242419.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus Rock1-15] gi|229130721|ref|ZP_04259674.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus BDRD-Cer4] gi|229148025|ref|ZP_04276364.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus BDRD-ST24] gi|229153634|ref|ZP_04281810.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus m1550] gi|296505903|ref|YP_003667603.1| translation-associated GTPase [Bacillus thuringiensis BMB171] gi|29899060|gb|AAP12331.1| GTP-binding protein [Bacillus cereus ATCC 14579] gi|218162247|gb|ACK62239.1| GTP-binding protein YchF [Bacillus cereus B4264] gi|228629820|gb|EEK86473.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus m1550] gi|228635450|gb|EEK91941.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus BDRD-ST24] gi|228652738|gb|EEL08623.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus BDRD-Cer4] gi|228670567|gb|EEL25880.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus Rock1-15] gi|228722207|gb|EEL73608.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus AH676] gi|296326955|gb|ADH09883.1| translation-associated GTPase [Bacillus thuringiensis BMB171] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 126 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 159 >gi|229087962|ref|ZP_04220070.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus Rock3-44] gi|228695347|gb|EEL48224.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus Rock3-44] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 126 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 159 >gi|229118965|ref|ZP_04248310.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus Rock1-3] gi|228664490|gb|EEL19986.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus Rock1-3] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 126 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 159 >gi|82750075|ref|YP_415816.1| GTP-dependent nucleic acid-binding protein EngD [Staphylococcus aureus RF122] gi|82655606|emb|CAI80002.1| GTP-binding protein [Staphylococcus aureus RF122] Length = 365 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 32/160 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDARLLKLEEMVQPKKTLP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQ--AAYQCILDEL 262 F DI GI+K A +G G+G++FL H + +V A ++NV A +D++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFADDNVTHVAGRVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELA 297 N EL L+ +++V+ + LAR+K++ A Sbjct: 126 EVINMELV-------LADLESVEKRLPRIEKLARQKDKTA 158 >gi|116626977|ref|YP_819596.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus thermophilus LMD-9] gi|116100254|gb|ABJ65400.1| Predicted GTPase, probable translation factor [Streptococcus thermophilus LMD-9] gi|312277422|gb|ADQ62079.1| Predicted GTPase, probable translation factor [Streptococcus thermophilus ND03] Length = 371 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLTKLTELFTPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIIHVVRAFDDENV 112 >gi|196036125|ref|ZP_03103525.1| GTP-binding protein YchF [Bacillus cereus W] gi|195991292|gb|EDX55260.1| GTP-binding protein YchF [Bacillus cereus W] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 126 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 159 >gi|304407783|ref|ZP_07389434.1| GTP-binding protein YchF [Paenibacillus curdlanolyticus YK9] gi|304343266|gb|EFM09109.1| GTP-binding protein YchF [Paenibacillus curdlanolyticus YK9] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 27/152 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLIKLTELVTPNKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA-LEENVQAAYQCI--LDEL 262 F DI G++ A +G G+G++FL H ++H+V ++EN+ + L ++ Sbjct: 66 TAFEFVDIAGLVAGASKGEGLGNKFLAHIREVDAIVHVVRCFVDENITHVAGKVDPLGDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 N EL LS ID+VD +KN Sbjct: 126 QTINLELI-------LSDIDSVDRRIDRSRKN 150 >gi|30265493|ref|NP_847870.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus anthracis str. Ames] gi|47531061|ref|YP_022410.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus anthracis str. 'Ames Ancestor'] gi|49188312|ref|YP_031565.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus anthracis str. Sterne] gi|49480471|ref|YP_039465.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52145283|ref|YP_086740.1| translation-associated GTPase [Bacillus cereus E33L] gi|165873025|ref|ZP_02217646.1| GTP-binding protein YchF [Bacillus anthracis str. A0488] gi|167635080|ref|ZP_02393397.1| GTP-binding protein YchF [Bacillus anthracis str. A0442] gi|170689478|ref|ZP_02880668.1| GTP-binding protein YchF [Bacillus anthracis str. A0465] gi|170707556|ref|ZP_02898009.1| GTP-binding protein YchF [Bacillus anthracis str. A0389] gi|190569303|ref|ZP_03022197.1| GTP-binding protein YchF [Bacillus anthracis Tsiankovskii-I] gi|196041950|ref|ZP_03109237.1| GTP-binding protein YchF [Bacillus cereus NVH0597-99] gi|196045504|ref|ZP_03112735.1| GTP-binding protein YchF [Bacillus cereus 03BB108] gi|206975804|ref|ZP_03236715.1| GTP-binding protein YchF [Bacillus cereus H3081.97] gi|217962968|ref|YP_002341546.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus cereus AH187] gi|218906667|ref|YP_002454501.1| GTP-binding protein YchF [Bacillus cereus AH820] gi|222098952|ref|YP_002533010.1| gtp-dependent nucleic acid-binding protein engd [Bacillus cereus Q1] gi|225867456|ref|YP_002752834.1| GTP-binding protein YchF [Bacillus cereus 03BB102] gi|227818244|ref|YP_002818253.1| GTP-binding protein YchF [Bacillus anthracis str. CDC 684] gi|228918087|ref|ZP_04081615.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228930481|ref|ZP_04093481.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228949197|ref|ZP_04111465.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229094586|ref|ZP_04225653.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus Rock3-42] gi|229142224|ref|ZP_04270748.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus BDRD-ST26] gi|229199605|ref|ZP_04326265.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus m1293] gi|229601860|ref|YP_002869684.1| GTP-binding protein YchF [Bacillus anthracis str. A0248] gi|254687084|ref|ZP_05150942.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus anthracis str. CNEVA-9066] gi|254724133|ref|ZP_05185918.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus anthracis str. A1055] gi|254742141|ref|ZP_05199828.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus anthracis str. Kruger B] gi|254755949|ref|ZP_05207981.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus anthracis str. Vollum] gi|254761371|ref|ZP_05213393.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus anthracis str. Australia 94] gi|300118823|ref|ZP_07056543.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus cereus SJ1] gi|30260171|gb|AAP29356.1| GTP-binding protein YchF [Bacillus anthracis str. Ames] gi|47506209|gb|AAT34885.1| GTP-binding protein YchF [Bacillus anthracis str. 'Ames Ancestor'] gi|49182239|gb|AAT57615.1| GTP-binding protein YchF [Bacillus anthracis str. Sterne] gi|49332027|gb|AAT62673.1| conserved GTP-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51978752|gb|AAU20302.1| conserved GTP-binding protein [Bacillus cereus E33L] gi|164711237|gb|EDR16793.1| GTP-binding protein YchF [Bacillus anthracis str. A0488] gi|167529554|gb|EDR92304.1| GTP-binding protein YchF [Bacillus anthracis str. A0442] gi|170127552|gb|EDS96426.1| GTP-binding protein YchF [Bacillus anthracis str. A0389] gi|170666580|gb|EDT17353.1| GTP-binding protein YchF [Bacillus anthracis str. A0465] gi|190559610|gb|EDV13601.1| GTP-binding protein YchF [Bacillus anthracis Tsiankovskii-I] gi|196023711|gb|EDX62387.1| GTP-binding protein YchF [Bacillus cereus 03BB108] gi|196027205|gb|EDX65825.1| GTP-binding protein YchF [Bacillus cereus NVH0597-99] gi|206745898|gb|EDZ57294.1| GTP-binding protein YchF [Bacillus cereus H3081.97] gi|217064503|gb|ACJ78753.1| GTP-binding protein YchF [Bacillus cereus AH187] gi|218538267|gb|ACK90665.1| GTP-binding protein YchF [Bacillus cereus AH820] gi|221243011|gb|ACM15721.1| conserved GTP-binding protein [Bacillus cereus Q1] gi|225790039|gb|ACO30256.1| GTP-binding protein YchF [Bacillus cereus 03BB102] gi|227003405|gb|ACP13148.1| GTP-binding protein YchF [Bacillus anthracis str. CDC 684] gi|228583879|gb|EEK42037.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus m1293] gi|228641242|gb|EEK97549.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus BDRD-ST26] gi|228688833|gb|EEL42664.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus Rock3-42] gi|228810480|gb|EEM56833.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228829200|gb|EEM74837.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228841567|gb|EEM86683.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229266268|gb|ACQ47905.1| GTP-binding protein YchF [Bacillus anthracis str. A0248] gi|298723791|gb|EFI64513.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus cereus SJ1] gi|324329426|gb|ADY24686.1| GTP-binding protein YchF [Bacillus thuringiensis serovar finitimus YBT-020] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 126 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 159 >gi|319945978|ref|ZP_08020227.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus australis ATCC 700641] gi|319747786|gb|EFW00031.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus australis ATCC 700641] Length = 371 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 24/131 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV------QAAYQCI 258 F DI GI+K A +G G+G++FL + ++H+V A +ENV + A+ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGREDAFVDP 125 Query: 259 LDELSAYNSEL 269 L ++ N EL Sbjct: 126 LADIDTINLEL 136 >gi|308071170|ref|YP_003872775.1| GTP-dependent nucleic acid-binding protein engD [Paenibacillus polymyxa E681] gi|305860449|gb|ADM72237.1| GTP-dependent nucleic acid-binding protein engD [Paenibacillus polymyxa E681] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 21/149 (14%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLDKLTELVVPNKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 F DI G+++ A +G G+G++FL H ++H+V E+ +D +S Sbjct: 66 TAFEFVDIAGLVRGASKGEGLGNKFLAHIREVDAIVHVVRCFEDENITHVDGKIDPISDI 125 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKN 294 + +E++ L+ I++VD +KN Sbjct: 126 QT---INLELI-LADIESVDKRIERSRKN 150 >gi|71893640|ref|YP_279086.1| GTP-dependent nucleic acid-binding protein EngD [Mycoplasma hyopneumoniae J] gi|71851767|gb|AAZ44375.1| GTP-binding protein YchF [Mycoplasma hyopneumoniae J] Length = 367 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 79/166 (47%), Gaps = 29/166 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 G+IGLPN GKS+ +++T+ +IA+YPF T+ PN+ V K + Sbjct: 6 GLIGLPNVGKSSLFSALTKMNVEIANYPFATIEPNIATVEIHDPRILQLTKIVKPEKTVF 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDE 261 + DI G+IK A G G+G++FL + L+HIV ++ +V I D Sbjct: 66 ATYSFVDIAGLIKGASTGEGLGNKFLANVRNVDCLVHIVRCFQDPKIIHVNNEINPIFD- 124 Query: 262 LSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF 307 + N EL L I T+ S LA+K N T QV FEF Sbjct: 125 IQTINLELI----FADLGTIQTIIS-RLAKKANN--TNDKQVKFEF 163 >gi|206970397|ref|ZP_03231350.1| GTP-binding protein YchF [Bacillus cereus AH1134] gi|228955726|ref|ZP_04117721.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229193726|ref|ZP_04320667.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus ATCC 10876] gi|206734974|gb|EDZ52143.1| GTP-binding protein YchF [Bacillus cereus AH1134] gi|228589751|gb|EEK47629.1| GTP-dependent nucleic acid-binding protein engD [Bacillus cereus ATCC 10876] gi|228803954|gb|EEM50578.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 126 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 159 >gi|152977674|ref|YP_001377191.1| translation-associated GTPase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026426|gb|ABS24196.1| GTP-binding protein YchF [Bacillus cytotoxicus NVH 391-98] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDDRLNKLTELVEPKKTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 126 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 159 >gi|65317456|ref|ZP_00390415.1| COG0012: Predicted GTPase, probable translation factor [Bacillus anthracis str. A2012] Length = 346 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 126 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 159 >gi|312865808|ref|ZP_07726030.1| GTP-binding protein YchF [Streptococcus downei F0415] gi|311098683|gb|EFQ56905.1| GTP-binding protein YchF [Streptococcus downei F0415] Length = 371 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 24/131 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLEKLTQLIKPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV------QAAYQCI 258 F DI GI+K A +G G+G++FL + ++H+V A +ENV + A+ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGREDAFVDP 125 Query: 259 LDELSAYNSEL 269 L ++ N EL Sbjct: 126 LADIDTINLEL 136 >gi|224368463|ref|YP_002602626.1| GTP-binding protein [Desulfobacterium autotrophicum HRM2] gi|223691179|gb|ACN14462.1| GTP-binding protein [Desulfobacterium autotrophicum HRM2] Length = 369 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 21/108 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST +++T A ++A+YPF T+ PN+GIV Sbjct: 4 NCGIVGLPNVGKSTLFSALTSAPAEVANYPFCTIEPNVGIVSVPDSRLAKITGFVNPKKV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL H + ++H+V ++ Sbjct: 64 IPAVVEFV--DIAGLVKGASKGEGLGNKFLGHIRQVGAIIHVVRCFDD 109 >gi|322390528|ref|ZP_08064046.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus parasanguinis ATCC 903] gi|321142802|gb|EFX38262.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus parasanguinis ATCC 903] Length = 371 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 24/131 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV------QAAYQCI 258 F DI GI+K A +G G+G++FL + ++H+V A +ENV + A+ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGREDAFVDP 125 Query: 259 LDELSAYNSEL 269 L ++ N EL Sbjct: 126 LADIDTINLEL 136 >gi|218900616|ref|YP_002449027.1| GTP-binding protein YchF [Bacillus cereus G9842] gi|228911314|ref|ZP_04075118.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis IBL 200] gi|228968627|ref|ZP_04129610.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar sotto str. T04001] gi|218542496|gb|ACK94890.1| GTP-binding protein YchF [Bacillus cereus G9842] gi|228791056|gb|EEM38674.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar sotto str. T04001] gi|228848332|gb|EEM93182.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis IBL 200] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 126 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 159 >gi|116510850|ref|YP_808066.1| translation-associated GTPase [Lactococcus lactis subsp. cremoris SK11] gi|125622889|ref|YP_001031372.1| translation-associated GTPase [Lactococcus lactis subsp. cremoris MG1363] gi|116106504|gb|ABJ71644.1| Predicted GTPase, probable translation factor [Lactococcus lactis subsp. cremoris SK11] gi|124491697|emb|CAL96616.1| GTP-dependent nucleic acid-binding protein [Lactococcus lactis subsp. cremoris MG1363] gi|300069627|gb|ADJ59027.1| GTP-dependent nucleic acid-binding protein EngD [Lactococcus lactis subsp. cremoris NZ9000] Length = 371 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 18/108 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLNKLTELIKPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQ 252 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASRGEGLGNKFLANIREVDAIIHVVRAFDDENVM 113 >gi|54020443|ref|YP_115816.1| GTP-dependent nucleic acid-binding protein EngD [Mycoplasma hyopneumoniae 232] gi|53987616|gb|AAV27817.1| GTP-binding protein [Mycoplasma hyopneumoniae 232] Length = 367 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 79/166 (47%), Gaps = 29/166 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 G+IGLPN GKS+ +++T+ +IA+YPF T+ PN+ V K + Sbjct: 6 GLIGLPNVGKSSLFSALTKMNVEIANYPFATIEPNIATVEIHDPRILQLTKIVKPEKTVF 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDE 261 + DI G+IK A G G+G++FL + L+HIV ++ +V I D Sbjct: 66 ATYSFVDIAGLIKGASTGEGLGNKFLANVRNVDCLVHIVRCFQDPKIIHVNNEINPIFD- 124 Query: 262 LSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF 307 + N EL L I T+ S LA+K N T QV FEF Sbjct: 125 IQTINLELI----FADLGTIQTIIS-RLAKKANN--TNDKQVKFEF 163 >gi|223933457|ref|ZP_03625442.1| GTP-binding protein YchF [Streptococcus suis 89/1591] gi|302023113|ref|ZP_07248324.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus suis 05HAS68] gi|330831855|ref|YP_004400680.1| GTP-binding protein YchF [Streptococcus suis ST3] gi|223897895|gb|EEF64271.1| GTP-binding protein YchF [Streptococcus suis 89/1591] gi|329306078|gb|AEB80494.1| GTP-binding protein YchF [Streptococcus suis ST3] Length = 371 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|320547717|ref|ZP_08042002.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus equinus ATCC 9812] gi|320447792|gb|EFW88550.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus equinus ATCC 9812] Length = 371 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 24/131 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV------QAAYQCI 258 F DI GI+K A +G G+G++FL + ++H+V A +ENV + A+ Sbjct: 66 TTFEFTDIAGIVKGASRGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGREDAFVDP 125 Query: 259 LDELSAYNSEL 269 L ++ N EL Sbjct: 126 LADIDTINLEL 136 >gi|306826190|ref|ZP_07459525.1| GTP-binding protein YchF [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|322375219|ref|ZP_08049733.1| GTP-binding protein YchF [Streptococcus sp. C300] gi|304431666|gb|EFM34647.1| GTP-binding protein YchF [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|321280719|gb|EFX57758.1| GTP-binding protein YchF [Streptococcus sp. C300] Length = 371 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|289166913|ref|YP_003445180.1| GTP-binding protein [Streptococcus mitis B6] gi|288906478|emb|CBJ21308.1| GTP-binding protein [Streptococcus mitis B6] Length = 371 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|228942624|ref|ZP_04105156.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975554|ref|ZP_04136106.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982190|ref|ZP_04142479.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis Bt407] gi|228777542|gb|EEM25820.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis Bt407] gi|228784164|gb|EEM32191.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817050|gb|EEM63143.1| GTP-dependent nucleic acid-binding protein engD [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326943273|gb|AEA19169.1| translation-associated GTPase [Bacillus thuringiensis serovar chinensis CT-43] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGKVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 126 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 159 >gi|148997954|ref|ZP_01825467.1| GTP-binding protein [Streptococcus pneumoniae SP11-BS70] gi|168576114|ref|ZP_02722019.1| GTP-binding protein YchF [Streptococcus pneumoniae MLV-016] gi|307066640|ref|YP_003875606.1| putative GTPase, probable translation factor [Streptococcus pneumoniae AP200] gi|147755964|gb|EDK63007.1| GTP-binding protein [Streptococcus pneumoniae SP11-BS70] gi|183578043|gb|EDT98571.1| GTP-binding protein YchF [Streptococcus pneumoniae MLV-016] gi|306408177|gb|ADM83604.1| Predicted GTPase, probable translation factor [Streptococcus pneumoniae AP200] gi|332198661|gb|EGJ12744.1| GTP-binding protein YchF [Streptococcus pneumoniae GA41317] Length = 371 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|326405604|gb|ADZ62675.1| GTP-dependent nucleic acid-binding protein [Lactococcus lactis subsp. lactis CV56] Length = 371 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 18/108 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLNKLTELIKPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQ 252 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASRGEGLGNKFLANIREVDAIIHVVRAFDDENVM 113 >gi|320528614|ref|ZP_08029767.1| GTP-binding protein YchF [Solobacterium moorei F0204] gi|320130980|gb|EFW23557.1| GTP-binding protein YchF [Solobacterium moorei F0204] Length = 367 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 29/143 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T ++ +YPF T+ PN+G+V K Y Sbjct: 6 GIVGLPNVGKSTLFNAITNSQVLAENYPFATINPNVGVVEVPDKRMDDFVELFHPKKTIY 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDE 261 F DI G++K A +G G+G++FL + T ++H+V + E+V+ + I D Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNQFLANIRETDAIVHVVRCFDDSNIEHVEGSVDPIRD- 124 Query: 262 LSAYNSELRKKIEIVGLSQIDTV 284 + N EL LS +DTV Sbjct: 125 IEEINLEL-------CLSDLDTV 140 >gi|281490505|ref|YP_003352485.1| GTP-dependent nucleic acid-binding protein, probable translation factor [Lactococcus lactis subsp. lactis KF147] gi|281374323|gb|ADA63856.1| GTP-dependent nucleic acid-binding protein, probable translation factor [Lactococcus lactis subsp. lactis KF147] Length = 371 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 18/108 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLNKLTELIKPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQ 252 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASRGEGLGNKFLANIREVDAIIHVVRAFDDENVM 113 >gi|126651980|ref|ZP_01724172.1| translation-associated GTPase [Bacillus sp. B14905] gi|126591249|gb|EAZ85358.1| translation-associated GTPase [Bacillus sp. B14905] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 33/195 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDARLDKLTELVVPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA-LEENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + +V ++EN+ + +D++ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLAHIREVDAICQVVRCFVDENITHVSGAVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELATQCGQVPFEFSSITGHGIP- 316 N EL L+ +++VD +A++K++ A V + +G P Sbjct: 126 EVINLEL-------ALADLESVDKRIQRVSKMAKQKDKEAMIEEPVLLKIKEQLENGKPA 178 Query: 317 QILECLHDKIFSIRG 331 + E D++ I+G Sbjct: 179 RAAELSDDELKVIKG 193 >gi|47568674|ref|ZP_00239371.1| GTP-binding protein YchF [Bacillus cereus G9241] gi|47554662|gb|EAL13016.1| GTP-binding protein YchF [Bacillus cereus G9241] Length = 366 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 32/161 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------EGYKE-- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLNKLTELVEPKKTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V E EN+ + +D++ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFEDENITHVSGEVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT-----LARKKNELAT 298 N EL L+ +++VD LAR+K++ A Sbjct: 126 ETINLELI-------LADLESVDKRIERVAKLARQKDKEAV 159 >gi|315612156|ref|ZP_07887071.1| GTP-binding protein YchF [Streptococcus sanguinis ATCC 49296] gi|331265442|ref|YP_004325072.1| putative GTP-binding protein [Streptococcus oralis Uo5] gi|315315717|gb|EFU63754.1| GTP-binding protein YchF [Streptococcus sanguinis ATCC 49296] gi|326682114|emb|CBY99730.1| putative GTP-binding protein [Streptococcus oralis Uo5] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|290579530|ref|YP_003483922.1| putative GTP-binding protein [Streptococcus mutans NN2025] gi|254996429|dbj|BAH87030.1| putative GTP-binding protein [Streptococcus mutans NN2025] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFIL------ 210 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ + E I+ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDIRLQKLTELIVPKKTVP 65 Query: 211 -----ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFNDENV 112 >gi|18313871|ref|NP_560538.1| translation-associated GTPase [Pyrobaculum aerophilum str. IM2] gi|18161436|gb|AAL64720.1| GTP binding protein, putative [Pyrobaculum aerophilum str. IM2] Length = 399 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/114 (38%), Positives = 59/114 (51%), Gaps = 23/114 (20%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG---------------- 199 +K + IIG PNAGKSTF A+ T KI+ PFTT+ PN+G Sbjct: 1 MKTKVQVAIIGKPNAGKSTFFAAATLKDVKISPTPFTTIDPNIGVGYVRIDDCPCKSVAC 60 Query: 200 -----IVKEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 +V EG Y L D+ G++ A QG G+G++FL H R VL+H+V A Sbjct: 61 NPKSYVVVEGVCYAPVELIDVAGLVPGAWQGRGLGNQFLDHLRRAPVLIHVVDA 114 >gi|15671988|ref|NP_266162.1| translation-associated GTPase [Lactococcus lactis subsp. lactis Il1403] gi|12722842|gb|AAK04104.1|AE006240_2 GTP-binding protein [Lactococcus lactis subsp. lactis Il1403] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 18/108 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLNKLTELIKPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQ 252 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASRGEGLGNKFLANIREVDAIIHVVRAFDDENVM 113 >gi|306828593|ref|ZP_07461787.1| GTP-binding protein YchF [Streptococcus mitis ATCC 6249] gi|304429201|gb|EFM32287.1| GTP-binding protein YchF [Streptococcus mitis ATCC 6249] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|240047577|ref|YP_002960965.1| GTP-dependent nucleic acid-binding protein EngD [Mycoplasma conjunctivae HRC/581] gi|239985149|emb|CAT05159.1| GTP-binding protein [Mycoplasma conjunctivae] Length = 384 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 17/123 (13%) Query: 144 GILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-- 201 GI +K ++KL + GI+GLPN GKS+ A++T + +IA+YPF T+ PN IV Sbjct: 4 GISFNQKSFFIKLIMSLKAGIVGLPNVGKSSLFAALTNSTVEIANYPFATIEPNTAIVEI 63 Query: 202 ---------------KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 K + F DI G+I+ A +G G+G++FL + ++ +V Sbjct: 64 KDPRLIEISRIVKPEKIIFSTFTFVDIAGLIEGASKGEGLGNKFLNNIRDVDCIVQVVRC 123 Query: 247 LEE 249 E+ Sbjct: 124 FED 126 >gi|255656639|ref|ZP_05402048.1| putative GTP-binding protein [Clostridium difficile QCD-23m63] gi|296449905|ref|ZP_06891669.1| GTP-binding protein YchF [Clostridium difficile NAP08] gi|296878286|ref|ZP_06902295.1| GTP-binding protein YchF [Clostridium difficile NAP07] gi|296261175|gb|EFH08006.1| GTP-binding protein YchF [Clostridium difficile NAP08] gi|296430734|gb|EFH16572.1| GTP-binding protein YchF [Clostridium difficile NAP07] Length = 365 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 22/110 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V +E Y Sbjct: 3 LGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVSVPDERLNKLQELYNSEKIV 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF DI G+++ A +G G+G++FL H ++H+V E ENV Sbjct: 63 PTAIEF--CDIAGLVRGASKGEGLGNKFLSHIREVDAIVHVVRCFEDENV 110 >gi|194398291|ref|YP_002036725.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pneumoniae G54] gi|194357958|gb|ACF56406.1| GTP-binding protein [Streptococcus pneumoniae G54] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|56808862|ref|ZP_00366573.1| COG0012: Predicted GTPase, probable translation factor [Streptococcus pyogenes M49 591] gi|209558591|ref|YP_002285063.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pyogenes NZ131] gi|209539792|gb|ACI60368.1| GTP-binding and nucleic acid-binding protein YchF [Streptococcus pyogenes NZ131] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASRGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|15899953|ref|NP_344557.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pneumoniae TIGR4] gi|111658626|ref|ZP_01409276.1| hypothetical protein SpneT_02000216 [Streptococcus pneumoniae TIGR4] gi|225857813|ref|YP_002739323.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pneumoniae 70585] gi|14971468|gb|AAK74197.1| GTP-binding protein [Streptococcus pneumoniae TIGR4] gi|225721677|gb|ACO17531.1| GTP-binding protein YchF [Streptococcus pneumoniae 70585] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|323126264|gb|ADX23561.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNIGMVEVPDERLQKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|169830188|ref|YP_001700346.1| GTP-dependent nucleic acid-binding protein [Lysinibacillus sphaericus C3-41] gi|168994676|gb|ACA42216.1| GTP-dependent nucleic acid-binding protein [Lysinibacillus sphaericus C3-41] Length = 366 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 33/195 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDARLDKLTELVVPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA-LEENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + +V ++EN+ + +D++ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLAHIREVDAICQVVRCFVDENITHVSGAVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELATQCGQVPFEFSSITGHGIP- 316 N EL L+ +++VD +A++K++ A V + +G P Sbjct: 126 EVINLEL-------ALADLESVDKRIQRVSKMAKQKDKEAMIEEPVLLKIKEQLENGKPA 178 Query: 317 QILECLHDKIFSIRG 331 + E D++ I+G Sbjct: 179 RAAELSDDELKVIKG 193 >gi|322388483|ref|ZP_08062086.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus infantis ATCC 700779] gi|321140796|gb|EFX36298.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus infantis ATCC 700779] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 24/131 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV------QAAYQCI 258 F DI GI+K A +G G+G++FL + ++H+V A +ENV + A+ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGREDAFVDP 125 Query: 259 LDELSAYNSEL 269 L ++ N EL Sbjct: 126 LADIDTINLEL 136 >gi|270291825|ref|ZP_06198040.1| GTP-binding protein YchF [Streptococcus sp. M143] gi|270279353|gb|EFA25195.1| GTP-binding protein YchF [Streptococcus sp. M143] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|182682974|ref|YP_001834721.1| GTP-binding protein [Streptococcus pneumoniae CGSP14] gi|298501794|ref|YP_003723734.1| GTP-binding translation factor YchF [Streptococcus pneumoniae TCH8431/19A] gi|182628308|gb|ACB89256.1| GTP-binding protein [Streptococcus pneumoniae CGSP14] gi|298237389|gb|ADI68520.1| GTP-binding translation factor YchF [Streptococcus pneumoniae TCH8431/19A] Length = 374 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 9 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 68 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 69 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 115 >gi|126700276|ref|YP_001089173.1| putative GTP-binding protein [Clostridium difficile 630] gi|254976255|ref|ZP_05272727.1| putative GTP-binding protein [Clostridium difficile QCD-66c26] gi|255093641|ref|ZP_05323119.1| putative GTP-binding protein [Clostridium difficile CIP 107932] gi|255101830|ref|ZP_05330807.1| putative GTP-binding protein [Clostridium difficile QCD-63q42] gi|255307697|ref|ZP_05351868.1| putative GTP-binding protein [Clostridium difficile ATCC 43255] gi|255315390|ref|ZP_05356973.1| putative GTP-binding protein [Clostridium difficile QCD-76w55] gi|255518055|ref|ZP_05385731.1| putative GTP-binding protein [Clostridium difficile QCD-97b34] gi|255651171|ref|ZP_05398073.1| putative GTP-binding protein [Clostridium difficile QCD-37x79] gi|260684237|ref|YP_003215522.1| putative GTP-binding protein [Clostridium difficile CD196] gi|260687896|ref|YP_003219030.1| putative GTP-binding protein [Clostridium difficile R20291] gi|306521018|ref|ZP_07407365.1| putative GTP-binding protein [Clostridium difficile QCD-32g58] gi|115251713|emb|CAJ69548.1| putative GTP-binding protein [Clostridium difficile] gi|260210400|emb|CBA64799.1| putative GTP-binding protein [Clostridium difficile CD196] gi|260213913|emb|CBE05961.1| putative GTP-binding protein [Clostridium difficile R20291] Length = 365 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 22/110 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V +E Y Sbjct: 3 LGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVSVPDERLNKLQELYNSEKIV 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF DI G+++ A +G G+G++FL H ++H+V E ENV Sbjct: 63 PTAIEF--CDIAGLVRGASKGEGLGNKFLSHIREVDAIVHVVRCFEDENV 110 >gi|222054666|ref|YP_002537028.1| GTP-binding protein YchF [Geobacter sp. FRC-32] gi|221563955|gb|ACM19927.1| GTP-binding protein YchF [Geobacter sp. FRC-32] Length = 364 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 27/153 (17%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-----------YKEFI 209 + GI+GLPN GKST ++T A + A+YPF T+ PN+GIV+ + E I Sbjct: 4 NCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVQVPDERMKKLAEIVHPERI 63 Query: 210 LA------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 L DI G++K A QG G+G++FL H ++H+V E ENV + ++ Sbjct: 64 LPTTIEFLDIAGLVKGASQGEGLGNKFLGHIRSVDAIVHVVRCFEDENVVHVSGGVNPVN 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++ +EL GL+ +D+V+ + +K Sbjct: 124 DIEVIKTEL-------GLADLDSVEKKLVRVEK 149 >gi|15902048|ref|NP_357598.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pneumoniae R6] gi|116516338|ref|YP_815423.1| translation-associated GTPase [Streptococcus pneumoniae D39] gi|148984548|ref|ZP_01817836.1| translation-associated GTPase [Streptococcus pneumoniae SP3-BS71] gi|148988908|ref|ZP_01820323.1| translation-associated GTPase [Streptococcus pneumoniae SP6-BS73] gi|148993581|ref|ZP_01823052.1| GTP-binding protein [Streptococcus pneumoniae SP9-BS68] gi|149013380|ref|ZP_01834089.1| GTP-binding protein [Streptococcus pneumoniae SP19-BS75] gi|149020162|ref|ZP_01835136.1| translation-associated GTPase [Streptococcus pneumoniae SP23-BS72] gi|168484304|ref|ZP_02709256.1| GTP-binding protein YchF [Streptococcus pneumoniae CDC1873-00] gi|168487224|ref|ZP_02711732.1| GTP-binding protein YchF [Streptococcus pneumoniae CDC1087-00] gi|168489339|ref|ZP_02713538.1| GTP-binding protein YchF [Streptococcus pneumoniae SP195] gi|168491774|ref|ZP_02715917.1| GTP-binding protein YchF [Streptococcus pneumoniae CDC0288-04] gi|168493996|ref|ZP_02718139.1| GTP-binding protein YchF [Streptococcus pneumoniae CDC3059-06] gi|169834529|ref|YP_001693438.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pneumoniae Hungary19A-6] gi|221230952|ref|YP_002510104.1| GTP-binding protein [Streptococcus pneumoniae ATCC 700669] gi|225853615|ref|YP_002735127.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pneumoniae JJA] gi|225855739|ref|YP_002737250.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pneumoniae P1031] gi|225860050|ref|YP_002741559.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pneumoniae Taiwan19F-14] gi|298229485|ref|ZP_06963166.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pneumoniae str. Canada MDR_19F] gi|303254905|ref|ZP_07340990.1| translation-associated GTPase [Streptococcus pneumoniae BS455] gi|303259730|ref|ZP_07345706.1| GTP-binding protein [Streptococcus pneumoniae SP-BS293] gi|303262197|ref|ZP_07348142.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS292] gi|303265393|ref|ZP_07351300.1| GTP-binding protein [Streptococcus pneumoniae BS397] gi|303266059|ref|ZP_07351953.1| GTP-binding protein [Streptococcus pneumoniae BS457] gi|303268467|ref|ZP_07354261.1| GTP-binding protein [Streptococcus pneumoniae BS458] gi|307126178|ref|YP_003878209.1| GTP-binding protein YchF [Streptococcus pneumoniae 670-6B] gi|307705910|ref|ZP_07642748.1| GTP-dependent nucleic acid-binding protein engD [Streptococcus mitis SK597] gi|15457532|gb|AAK98808.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116076914|gb|ABJ54634.1| GTP-binding protein [Streptococcus pneumoniae D39] gi|147762903|gb|EDK69851.1| GTP-binding protein [Streptococcus pneumoniae SP19-BS75] gi|147923325|gb|EDK74439.1| translation-associated GTPase [Streptococcus pneumoniae SP3-BS71] gi|147925719|gb|EDK76795.1| translation-associated GTPase [Streptococcus pneumoniae SP6-BS73] gi|147927802|gb|EDK78824.1| GTP-binding protein [Streptococcus pneumoniae SP9-BS68] gi|147930840|gb|EDK81821.1| translation-associated GTPase [Streptococcus pneumoniae SP23-BS72] gi|168997031|gb|ACA37643.1| GTP-binding protein YchF [Streptococcus pneumoniae Hungary19A-6] gi|172042448|gb|EDT50494.1| GTP-binding protein YchF [Streptococcus pneumoniae CDC1873-00] gi|183569891|gb|EDT90419.1| GTP-binding protein YchF [Streptococcus pneumoniae CDC1087-00] gi|183572250|gb|EDT92778.1| GTP-binding protein YchF [Streptococcus pneumoniae SP195] gi|183574077|gb|EDT94605.1| GTP-binding protein YchF [Streptococcus pneumoniae CDC0288-04] gi|183575869|gb|EDT96397.1| GTP-binding protein YchF [Streptococcus pneumoniae CDC3059-06] gi|220673412|emb|CAR67870.1| putative putative GTP-binding protein [Streptococcus pneumoniae ATCC 700669] gi|225723826|gb|ACO19679.1| GTP-binding protein YchF [Streptococcus pneumoniae JJA] gi|225725903|gb|ACO21755.1| GTP-binding protein YchF [Streptococcus pneumoniae P1031] gi|225726812|gb|ACO22663.1| GTP-binding protein YchF [Streptococcus pneumoniae Taiwan19F-14] gi|301799153|emb|CBW31665.1| putative putative GTP-binding protein [Streptococcus pneumoniae OXC141] gi|301800977|emb|CBW33638.1| putative putative GTP-binding protein [Streptococcus pneumoniae INV200] gi|302598176|gb|EFL65237.1| translation-associated GTPase [Streptococcus pneumoniae BS455] gi|302636837|gb|EFL67327.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS292] gi|302639282|gb|EFL69741.1| GTP-binding protein [Streptococcus pneumoniae SP-BS293] gi|302641968|gb|EFL72321.1| GTP-binding protein [Streptococcus pneumoniae BS458] gi|302644363|gb|EFL74616.1| GTP-binding protein [Streptococcus pneumoniae BS457] gi|302645070|gb|EFL75310.1| GTP-binding protein [Streptococcus pneumoniae BS397] gi|306483240|gb|ADM90109.1| GTP-binding protein YchF [Streptococcus pneumoniae 670-6B] gi|307620571|gb|EFN99669.1| GTP-dependent nucleic acid-binding protein engD [Streptococcus mitis SK597] gi|327388989|gb|EGE87337.1| GTP-binding protein [Streptococcus pneumoniae GA04375] gi|332071326|gb|EGI81821.1| GTP-binding protein [Streptococcus pneumoniae GA17545] gi|332071707|gb|EGI82200.1| GTPase [Streptococcus pneumoniae GA17570] gi|332077811|gb|EGI88270.1| GTP-binding conserved hypothetical domain protein [Streptococcus pneumoniae GA41301] gi|332198868|gb|EGJ12950.1| GTPase [Streptococcus pneumoniae GA47368] gi|332199071|gb|EGJ13152.1| GTPase [Streptococcus pneumoniae GA47901] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|332523762|ref|ZP_08400014.1| GTP-binding protein YchF [Streptococcus porcinus str. Jelinkova 176] gi|332315026|gb|EGJ28011.1| GTP-binding protein YchF [Streptococcus porcinus str. Jelinkova 176] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLNKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|76788043|ref|YP_328733.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus agalactiae A909] gi|77405626|ref|ZP_00782715.1| GTP-binding protein YchF [Streptococcus agalactiae H36B] gi|77407685|ref|ZP_00784440.1| GTP-binding protein YchF [Streptococcus agalactiae COH1] gi|77411310|ref|ZP_00787659.1| GTP-binding protein YchF [Streptococcus agalactiae CJB111] gi|76563100|gb|ABA45684.1| GTP-binding protein YchF [Streptococcus agalactiae A909] gi|77162646|gb|EAO73608.1| GTP-binding protein YchF [Streptococcus agalactiae CJB111] gi|77173684|gb|EAO76798.1| GTP-binding protein YchF [Streptococcus agalactiae COH1] gi|77175770|gb|EAO78550.1| GTP-binding protein YchF [Streptococcus agalactiae H36B] gi|319746179|gb|EFV98449.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus agalactiae ATCC 13813] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|293364519|ref|ZP_06611244.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus oralis ATCC 35037] gi|307702809|ref|ZP_07639759.1| GTP-dependent nucleic acid-binding protein engD [Streptococcus oralis ATCC 35037] gi|291317027|gb|EFE57455.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus oralis ATCC 35037] gi|307623665|gb|EFO02652.1| GTP-dependent nucleic acid-binding protein engD [Streptococcus oralis ATCC 35037] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|329116224|ref|ZP_08244941.1| GTP-binding protein YchF [Streptococcus parauberis NCFD 2020] gi|326906629|gb|EGE53543.1| GTP-binding protein YchF [Streptococcus parauberis NCFD 2020] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 24/131 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLDKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV------QAAYQCI 258 F DI GI+K A +G G+G++FL + ++H+V A +ENV + A+ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGREDAFVDP 125 Query: 259 LDELSAYNSEL 269 L ++ N EL Sbjct: 126 LADIDTINLEL 136 >gi|322392422|ref|ZP_08065882.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus peroris ATCC 700780] gi|321144414|gb|EFX39815.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus peroris ATCC 700780] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|71902671|ref|YP_279474.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pyogenes MGAS6180] gi|71801766|gb|AAX71119.1| GTP-binding protein [Streptococcus pyogenes MGAS6180] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASRGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|322373975|ref|ZP_08048509.1| GTP-binding protein YchF [Streptococcus sp. C150] gi|321276941|gb|EFX54012.1| GTP-binding protein YchF [Streptococcus sp. C150] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLTKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|307711219|ref|ZP_07647641.1| GTP-dependent nucleic acid-binding protein engD [Streptococcus mitis SK321] gi|307617181|gb|EFN96359.1| GTP-dependent nucleic acid-binding protein engD [Streptococcus mitis SK321] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|293553535|ref|ZP_06674162.1| GTP-binding protein YchF [Enterococcus faecium E1039] gi|291602290|gb|EFF32515.1| GTP-binding protein YchF [Enterococcus faecium E1039] Length = 366 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNIGMVEVPDWRLQRLTELVHPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL H + + H+V +++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNQFLSHIRQVDAICHVVRCFDDD 110 >gi|301793329|emb|CBW35688.1| putative putative GTP-binding protein [Streptococcus pneumoniae INV104] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|94989513|ref|YP_597613.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pyogenes MGAS10270] gi|94543021|gb|ABF33069.1| GTP-binding protein, probable translation factor [Streptococcus pyogenes MGAS10270] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASRGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|296134463|ref|YP_003641710.1| GTP-binding protein YchF [Thermincola sp. JR] gi|296033041|gb|ADG83809.1| GTP-binding protein YchF [Thermincola potens JR] Length = 364 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------ 209 +GI+GLPN GKST ++TRA + A+YPF T+ PN+G+V+ + E + Sbjct: 3 LGIVGLPNVGKSTLFNAITRAGAEAANYPFCTIDPNVGVVEVPDPRLDKLAEMVNPQRVV 62 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL H ++H+V ++ Sbjct: 63 PTVTQFVDIAGLVRGASKGEGLGNKFLSHIREVDAIVHVVRCFRDD 108 >gi|19745204|ref|NP_606340.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pyogenes MGAS8232] gi|50913350|ref|YP_059322.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pyogenes MGAS10394] gi|94993400|ref|YP_601498.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pyogenes MGAS10750] gi|139472892|ref|YP_001127607.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pyogenes str. Manfredo] gi|19747293|gb|AAL96839.1| putative GTP-binding protein [Streptococcus pyogenes MGAS8232] gi|50902424|gb|AAT86139.1| GTP-binding protein [Streptococcus pyogenes MGAS10394] gi|94546908|gb|ABF36954.1| GTP-binding protein, probable translation factor [Streptococcus pyogenes MGAS10750] gi|134271138|emb|CAM29348.1| putative GTP-binding protein [Streptococcus pyogenes str. Manfredo] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASRGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|306834604|ref|ZP_07467716.1| GTP-binding protein YchF [Streptococcus bovis ATCC 700338] gi|304423240|gb|EFM26394.1| GTP-binding protein YchF [Streptococcus bovis ATCC 700338] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 24/131 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV------QAAYQCI 258 F DI GI+K A +G G+G++FL + ++H+V A +ENV + A+ Sbjct: 66 TTFEFTDIAGIVKGASRGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGREDAFVDP 125 Query: 259 LDELSAYNSEL 269 L ++ N EL Sbjct: 126 LADIDTINLEL 136 >gi|164686384|ref|ZP_02210414.1| hypothetical protein CLOBAR_02822 [Clostridium bartlettii DSM 16795] gi|164601986|gb|EDQ95451.1| hypothetical protein CLOBAR_02822 [Clostridium bartlettii DSM 16795] Length = 365 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KE--GYKEFI 209 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V KE K+ + Sbjct: 3 LGIVGLPNVGKSTLFNAITQAGAESANYPFCTIEPNVGVVAVPDERLNVLKELNNAKKIV 62 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL H ++H+V E++ Sbjct: 63 PTAIEFCDIAGLVRGASKGEGLGNKFLSHIREVDAIVHVVRCFEDS 108 >gi|94987635|ref|YP_595736.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pyogenes MGAS9429] gi|94991501|ref|YP_599600.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pyogenes MGAS2096] gi|94541143|gb|ABF31192.1| GTP-binding protein, probable translation factor [Streptococcus pyogenes MGAS9429] gi|94545009|gb|ABF35056.1| GTP-binding protein, probable translation factor [Streptococcus pyogenes MGAS2096] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASRGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|22536191|ref|NP_687042.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus agalactiae 2603V/R] gi|25010081|ref|NP_734476.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus agalactiae NEM316] gi|76797979|ref|ZP_00780238.1| GTP-binding protein YchF [Streptococcus agalactiae 18RS21] gi|77414475|ref|ZP_00790625.1| GTP-binding protein YchF [Streptococcus agalactiae 515] gi|22533008|gb|AAM98914.1|AE014191_6 GTP-binding protein YchF [Streptococcus agalactiae 2603V/R] gi|23094432|emb|CAD45651.1| Unknown [Streptococcus agalactiae NEM316] gi|76586659|gb|EAO63158.1| GTP-binding protein YchF [Streptococcus agalactiae 18RS21] gi|77159485|gb|EAO70646.1| GTP-binding protein YchF [Streptococcus agalactiae 515] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|258615282|ref|ZP_05713052.1| GTP-dependent nucleic acid-binding protein EngD [Enterococcus faecium DO] Length = 211 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDWRLQRLTELVHPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL H + + H+V +++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNQFLSHIRQVDAICHVVRCFDDD 110 >gi|228476804|ref|ZP_04061452.1| GTP-binding protein YchF [Streptococcus salivarius SK126] gi|312864135|ref|ZP_07724370.1| GTP-binding protein YchF [Streptococcus vestibularis F0396] gi|228251541|gb|EEK10678.1| GTP-binding protein YchF [Streptococcus salivarius SK126] gi|311100367|gb|EFQ58575.1| GTP-binding protein YchF [Streptococcus vestibularis F0396] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLTKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|307707902|ref|ZP_07644377.1| GTP-binding protein YchF [Streptococcus mitis NCTC 12261] gi|307710362|ref|ZP_07646803.1| GTP-dependent nucleic acid-binding protein engD [Streptococcus mitis SK564] gi|307615967|gb|EFN95165.1| GTP-binding protein YchF [Streptococcus mitis NCTC 12261] gi|307618954|gb|EFN98089.1| GTP-dependent nucleic acid-binding protein engD [Streptococcus mitis SK564] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|299144033|ref|ZP_07037113.1| GTP-binding protein YchF [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518518|gb|EFI42257.1| GTP-binding protein YchF [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 364 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 3 LGIVGLPNVGKSTLFNALTKAGAEAANYPFATIEPNIGVVNVPDERLKVLSEMSNSDKTV 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 Y DI G++K A +G G+G++FL + ++H+V E EN+ Sbjct: 63 YTNIEFFDIAGLVKGASKGEGLGNQFLSNIREVDAIVHVVRCFENENI 110 >gi|251781473|ref|YP_002995774.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390101|dbj|BAH80560.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|311032238|ref|ZP_07710328.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus sp. m3-13] Length = 366 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVDVPDERLQKLTELVNPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL H + + H+V ++ Sbjct: 66 THFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRCFADD 110 >gi|306826406|ref|ZP_07459720.1| GTP-binding protein YchF [Streptococcus pyogenes ATCC 10782] gi|304431401|gb|EFM34396.1| GTP-binding protein YchF [Streptococcus pyogenes ATCC 10782] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASRGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|288904228|ref|YP_003429449.1| GTP-binding protein [Streptococcus gallolyticus UCN34] gi|306832488|ref|ZP_07465640.1| GTP-binding protein YchF [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325977205|ref|YP_004286921.1| putative GTP-binding protein YLF2 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288730953|emb|CBI12497.1| putative GTP-binding protein [Streptococcus gallolyticus UCN34] gi|304425388|gb|EFM28508.1| GTP-binding protein YchF [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177133|emb|CBZ47177.1| putative GTP-binding protein YLF2 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 24/131 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV------QAAYQCI 258 F DI GI+K A +G G+G++FL + ++H+V A +ENV + A+ Sbjct: 66 TTFEFTDIAGIVKGASRGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGREDAFVDP 125 Query: 259 LDELSAYNSEL 269 L ++ N EL Sbjct: 126 LADIDTINLEL 136 >gi|226355406|ref|YP_002785146.1| GTP-dependent nucleic acid-binding protein EngD [Deinococcus deserti VCD115] gi|226317396|gb|ACO45392.1| putative GTP-dependent nucleic acid-binding protein [Deinococcus deserti VCD115] Length = 365 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 35/171 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++TRA A+YPF T+ PN+G V Sbjct: 5 IGIVGLPNVGKSTLFNAITRAGALAANYPFATIEPNVGRVMVPDERLSALSKVFTKGERV 64 Query: 203 ----EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQ 256 + EF+ DI G++K A QG G+G++FL + + H+V E+ V A + Sbjct: 65 PPIIPTFVEFV--DIAGLVKGASQGEGLGNQFLANIREVDAIAHVVRCFEDGNVVHVAGK 122 Query: 257 C-ILDELSAYNSELRKKIEIVGLS------QIDTVDSDTLARKKNELATQC 300 LD++ N+EL ++ GL Q +D AR++ ELA Q Sbjct: 123 VDPLDDIETINTELILA-DLSGLEKRLQNLQKKAKGNDKEAREQAELAEQI 172 >gi|21909540|ref|NP_663808.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pyogenes MGAS315] gi|28894916|ref|NP_801266.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pyogenes SSI-1] gi|21903720|gb|AAM78611.1| putative GTP-binding protein [Streptococcus pyogenes MGAS315] gi|28810161|dbj|BAC63099.1| putative GTP-binding protein [Streptococcus pyogenes SSI-1] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASRGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|298255138|ref|ZP_06978724.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pneumoniae str. Canada MDR_19A] Length = 342 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 24/131 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV------QAAYQCI 258 F DI GI+K A +G G+G++FL + ++H+V A +ENV + A+ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGREDAFVDP 125 Query: 259 LDELSAYNSEL 269 L ++ N EL Sbjct: 126 LADIDTINLEL 136 >gi|51244634|ref|YP_064518.1| translation-associated GTPase [Desulfotalea psychrophila LSv54] gi|50875671|emb|CAG35511.1| probable GTP-binding protein (YchF) [Desulfotalea psychrophila LSv54] Length = 365 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T A +YPF T+ PN+GIV K + Sbjct: 6 GIVGLPNVGKSTIFNALTAAGIDAENYPFCTIEPNVGIVPVLDSRLDVLSEIAKTKKTIH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A QG G+G++FL H + ++H+V E++ Sbjct: 66 TQMEFVDIAGLVKGASQGEGLGNKFLGHIRQVEAIVHVVRCFEDD 110 >gi|299541780|ref|ZP_07052103.1| GTP-dependent nucleic acid-binding protein [Lysinibacillus fusiformis ZC1] gi|298725518|gb|EFI66159.1| GTP-dependent nucleic acid-binding protein [Lysinibacillus fusiformis ZC1] Length = 366 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 33/195 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDARLDKLTELVVPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA-LEENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + +V ++EN+ + +D++ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLAHIREVDAICQVVRCFVDENITHVSGAVDPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELATQCGQVPFEFSSITGHGIP- 316 N EL L+ +++VD +A++K++ A V + +G P Sbjct: 126 EVINLEL-------ALADLESVDKRLQRVSKMAKQKDKEAMIEEPVLLKIKEQLENGKPA 178 Query: 317 QILECLHDKIFSIRG 331 + E D++ I+G Sbjct: 179 RAAELSDDELKVIKG 193 >gi|225869492|ref|YP_002745439.1| GTP-binding protein [Streptococcus equi subsp. equi 4047] gi|225698896|emb|CAW91880.1| putative GTP-binding protein [Streptococcus equi subsp. equi 4047] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|149003144|ref|ZP_01828053.1| translation-associated GTPase [Streptococcus pneumoniae SP14-BS69] gi|237651083|ref|ZP_04525335.1| translation-associated GTPase [Streptococcus pneumoniae CCRI 1974] gi|237821196|ref|ZP_04597041.1| translation-associated GTPase [Streptococcus pneumoniae CCRI 1974M2] gi|147758885|gb|EDK65881.1| translation-associated GTPase [Streptococcus pneumoniae SP14-BS69] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|322412919|gb|EFY03826.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 371 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|52082637|ref|YP_081428.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus licheniformis ATCC 14580] gi|52788036|ref|YP_093865.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus licheniformis ATCC 14580] gi|319648503|ref|ZP_08002719.1| GTP-dependent nucleic acid-binding protein engD [Bacillus sp. BT1B_CT2] gi|52005848|gb|AAU25790.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus licheniformis ATCC 14580] gi|52350538|gb|AAU43172.1| YyaF [Bacillus licheniformis ATCC 14580] gi|317389582|gb|EFV70393.1| GTP-dependent nucleic acid-binding protein engD [Bacillus sp. BT1B_CT2] Length = 366 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDERLQKLTELVNPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL H + + H+V ++ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICHVVRCFADD 110 >gi|300813415|ref|ZP_07093764.1| GTP-binding protein YchF [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512473|gb|EFK39624.1| GTP-binding protein YchF [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 364 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV--------------KEG--- 204 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K G Sbjct: 3 LGIVGLPNVGKSTLFNALTQAGAEAANYPFATIEPNIGVVNVPDERLKVLSDISKSGRIV 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 Y DI G++K A +G G+G++FL + ++H+V E ENV Sbjct: 63 YTNIEFYDIAGLVKGASKGEGLGNQFLSNIREVDAIVHVVRCFENENV 110 >gi|119872047|ref|YP_930054.1| translation-associated GTPase [Pyrobaculum islandicum DSM 4184] gi|119673455|gb|ABL87711.1| GTPase of unknown function [Pyrobaculum islandicum DSM 4184] Length = 401 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 23/108 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI------------VKEGYKEFI 209 IGI+G PNAGKSTF A+ T KI+ PFTT+ PN+GI ++ + +I Sbjct: 9 IGIVGKPNAGKSTFFAAATLKDVKISPIPFTTIDPNIGIGYVRIETCPCTNIRCNPRSYI 68 Query: 210 -----------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 L D+ G++ A QG G+G++FL H R VL+H+V A Sbjct: 69 VLDGVCFAPVELIDVAGLVPGAWQGRGLGNQFLDHLRRAPVLIHVVDA 116 >gi|282883227|ref|ZP_06291826.1| GTP-binding protein YchF [Peptoniphilus lacrimalis 315-B] gi|281297039|gb|EFA89536.1| GTP-binding protein YchF [Peptoniphilus lacrimalis 315-B] Length = 364 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV--------------KEG--- 204 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K G Sbjct: 3 LGIVGLPNVGKSTLFNALTQAGAEAANYPFATIEPNIGVVNVPDERLKVLSDISKSGRIV 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 Y DI G++K A +G G+G++FL + ++H+V E ENV Sbjct: 63 YTNIEFYDIAGLVKGASKGEGLGNQFLSNIREVDAIVHVVRCFENENV 110 >gi|28211303|ref|NP_782247.1| GTP-dependent nucleic acid-binding protein EngD [Clostridium tetani E88] gi|28203743|gb|AAO36184.1| GTP-binding protein [Clostridium tetani E88] Length = 372 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++T A + A+YPF T+ PN+G+V ++ Sbjct: 10 LGIVGLPNVGKSTLFNAITSAGAEAANYPFCTIEPNVGVVTVPDKRLDVLEKMYNTKRKL 69 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y DI G++K A +G G+G++FL H ++H+V ++ Sbjct: 70 YATIEFYDIAGLVKGASKGEGLGNKFLSHIREVESIVHVVRCFDD 114 >gi|134299143|ref|YP_001112639.1| GTP-binding protein YchF [Desulfotomaculum reducens MI-1] gi|134051843|gb|ABO49814.1| GTP-binding protein YchF [Desulfotomaculum reducens MI-1] Length = 367 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 32/157 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIEPNVGVVTVPDHRLDKLTELVIPKKTIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 F DI G++K A +G G+G++FL H + H+V +C +D+ + Sbjct: 66 TTFEFVDIAGLVKGASRGEGLGNKFLSHIREVDAIAHVV-----------RCFIDDDITH 114 Query: 266 NS---ELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 S + IE++ L + D +++ R++ LA++ Sbjct: 115 VSGKIDPINDIEVINLELV-LADLESMERRQERLASK 150 >gi|327399686|ref|YP_004340555.1| GTP-binding protein YchF [Hippea maritima DSM 10411] gi|327182315|gb|AEA34496.1| GTP-binding protein YchF [Hippea maritima DSM 10411] Length = 363 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--VKEG--YK------------ 206 GI+GLPN GKST +++R + +++PF T+ PN+GI VK+ YK Sbjct: 6 GIVGLPNVGKSTTFNALSRGNAESSNFPFCTIEPNVGIAEVKDERLYKLAELVNPKKITP 65 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +GAG+G+RFL H V++H+V E+ Sbjct: 66 AVVEFV--DIAGLVKGASEGAGLGNRFLSHIRDVQVIVHVVRCFED 109 >gi|15806403|ref|NP_295109.1| GTP-dependent nucleic acid-binding protein EngD [Deinococcus radiodurans R1] gi|6459140|gb|AAF10955.1|AE001984_5 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 365 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 83/174 (47%), Gaps = 35/174 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++TRA A+YPF T+ PN+G V Sbjct: 5 IGIVGLPNVGKSTLFNAITRAGALAANYPFATIEPNVGRVTVPDERLSALSQVFTKGERV 64 Query: 203 ----EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-NV--QAAY 255 + EF+ DI G++K A QG G+G++FL + + H+V E+ NV A Sbjct: 65 PPIIPTFVEFV--DIAGLVKGASQGEGLGNQFLANIREVDAIAHVVRCFEDPNVVHVAGR 122 Query: 256 QCILDELSAYNSELRKKIEIVGLS------QIDTVDSDTLARKKNELATQCGQV 303 LD++ N+EL ++ GL Q D A+++ ELA Q QV Sbjct: 123 VDPLDDIETINTELILA-DLAGLEKRAQNLQKKAKGGDKDAKEQLELAEQIIQV 175 >gi|171778200|ref|ZP_02919429.1| hypothetical protein STRINF_00268 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283024|gb|EDT48448.1| hypothetical protein STRINF_00268 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 371 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 24/131 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV------QAAYQCI 258 F DI GI+K A +G G+G++FL + ++H+V A +ENV + A+ Sbjct: 66 TTFEFTDIAGIVKGASRGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGREDAFVDP 125 Query: 259 LDELSAYNSEL 269 L ++ N EL Sbjct: 126 LADIDTINLEL 136 >gi|303242082|ref|ZP_07328573.1| GTP-binding protein YchF [Acetivibrio cellulolyticus CD2] gi|302590376|gb|EFL60133.1| GTP-binding protein YchF [Acetivibrio cellulolyticus CD2] Length = 364 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 +GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV + Y Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGIVAVPDERLDKLAKMYNPEKLT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL H ++H+V E++ Sbjct: 63 PTAIEFV--DIAGLVKGASKGEGLGNKFLSHIREVDSIVHVVRCFEDS 108 >gi|69247500|ref|ZP_00604370.1| Conserved hypothetical protein 92 [Enterococcus faecium DO] gi|257878634|ref|ZP_05658287.1| translation-associated GTPase [Enterococcus faecium 1,230,933] gi|257881300|ref|ZP_05660953.1| translation-associated GTPase [Enterococcus faecium 1,231,502] gi|257888109|ref|ZP_05667762.1| translation-associated GTPase [Enterococcus faecium 1,141,733] gi|257890517|ref|ZP_05670170.1| translation-associated GTPase [Enterococcus faecium 1,231,410] gi|257893093|ref|ZP_05672746.1| translation-associated GTPase [Enterococcus faecium 1,231,408] gi|257896272|ref|ZP_05675925.1| translation-associated GTPase [Enterococcus faecium Com12] gi|257899259|ref|ZP_05678912.1| translation-associated GTPase [Enterococcus faecium Com15] gi|260558215|ref|ZP_05830411.1| translation-associated GTPase [Enterococcus faecium C68] gi|293379353|ref|ZP_06625497.1| GTP-binding protein YchF [Enterococcus faecium PC4.1] gi|293563239|ref|ZP_06677691.1| GTP-binding protein YchF [Enterococcus faecium E1162] gi|293569171|ref|ZP_06680477.1| GTP-binding protein YchF [Enterococcus faecium E1071] gi|293572706|ref|ZP_06683670.1| GTP-binding protein YchF [Enterococcus faecium E980] gi|294619733|ref|ZP_06699138.1| GTP-binding protein YchF [Enterococcus faecium E1679] gi|294623747|ref|ZP_06702575.1| GTP-binding protein YchF [Enterococcus faecium U0317] gi|68194825|gb|EAN09300.1| Conserved hypothetical protein 92 [Enterococcus faecium DO] gi|257812862|gb|EEV41620.1| translation-associated GTPase [Enterococcus faecium 1,230,933] gi|257816958|gb|EEV44286.1| translation-associated GTPase [Enterococcus faecium 1,231,502] gi|257824163|gb|EEV51095.1| translation-associated GTPase [Enterococcus faecium 1,141,733] gi|257826877|gb|EEV53503.1| translation-associated GTPase [Enterococcus faecium 1,231,410] gi|257829472|gb|EEV56079.1| translation-associated GTPase [Enterococcus faecium 1,231,408] gi|257832837|gb|EEV59258.1| translation-associated GTPase [Enterococcus faecium Com12] gi|257837171|gb|EEV62245.1| translation-associated GTPase [Enterococcus faecium Com15] gi|260075389|gb|EEW63695.1| translation-associated GTPase [Enterococcus faecium C68] gi|291588140|gb|EFF19982.1| GTP-binding protein YchF [Enterococcus faecium E1071] gi|291594003|gb|EFF25472.1| GTP-binding protein YchF [Enterococcus faecium E1679] gi|291596701|gb|EFF27924.1| GTP-binding protein YchF [Enterococcus faecium U0317] gi|291604778|gb|EFF34260.1| GTP-binding protein YchF [Enterococcus faecium E1162] gi|291607198|gb|EFF36556.1| GTP-binding protein YchF [Enterococcus faecium E980] gi|292641876|gb|EFF60042.1| GTP-binding protein YchF [Enterococcus faecium PC4.1] Length = 366 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDWRLQRLTELVHPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL H + + H+V +++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNQFLSHIRQVDAICHVVRCFDDD 110 >gi|313889527|ref|ZP_07823173.1| GTP-binding protein YchF [Streptococcus pseudoporcinus SPIN 20026] gi|313122139|gb|EFR45232.1| GTP-binding protein YchF [Streptococcus pseudoporcinus SPIN 20026] Length = 371 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 18/108 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLNKLTELITPKKTIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQ 252 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVM 113 >gi|187933242|ref|YP_001886641.1| GTP-dependent nucleic acid-binding protein EngD [Clostridium botulinum B str. Eklund 17B] gi|187721395|gb|ACD22616.1| GTP-binding protein YchF [Clostridium botulinum B str. Eklund 17B] Length = 365 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K+ Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVSVPDKRLDVLEKMYNTKKKI 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 Y DI G++K A +G G+G++FL + ++H+V +ENV Sbjct: 63 YTAIEFYDIAGLVKGASKGEGLGNKFLANIREVESIVHVVRCFDDENV 110 >gi|251781054|ref|ZP_04823974.1| GTP-binding protein YchF [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085369|gb|EES51259.1| GTP-binding protein YchF [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 365 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K+ Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVSVPDKRLDVLEKMYNTKKKI 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 Y DI G++K A +G G+G++FL + ++H+V +ENV Sbjct: 63 YTAIEFYDIAGLVKGASKGEGLGNKFLANIREVESIVHVVRCFDDENV 110 >gi|195977161|ref|YP_002122405.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225867622|ref|YP_002743570.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus] gi|195973866|gb|ACG61392.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225700898|emb|CAW97559.1| putative GTP-binding protein [Streptococcus equi subsp. zooepidemicus] Length = 371 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|328725674|ref|XP_003248571.1| PREDICTED: GTP-dependent nucleic acid-binding protein engD-like, partial [Acyrthosiphon pisum] Length = 314 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 65/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDHRLQELTKLVKPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA-LEENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + +V A ++ENV + +D++ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFVDENVTHVSGKVDPIDDI 125 Query: 263 SAYNSEL 269 N EL Sbjct: 126 EVINMEL 132 >gi|291278879|ref|YP_003495714.1| GTP-binding protein [Deferribacter desulfuricans SSM1] gi|290753581|dbj|BAI79958.1| GTP-binding protein [Deferribacter desulfuricans SSM1] Length = 363 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 80/154 (51%), Gaps = 27/154 (17%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFI--------- 209 + GIIGLPN GKST ++TRAK + A+YPF T+ PN+GIV + FI Sbjct: 4 NCGIIGLPNVGKSTIFNALTRAKAESANYPFCTIDPNVGIVNVPDERLYFIADCIKPKKV 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LD 260 DI G++K A +G G+G++FL + + + H+V +ENV + + + Sbjct: 64 TPTVIEFVDIAGLVKGASKGEGLGNQFLSNIRQVDAIAHVVRCFDDENVVHVHGKVDPAN 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 ++ N+EL L+ ++ +D L +KN Sbjct: 124 DIEIINTELL-------LADLEVLDKAILKLEKN 150 >gi|257885575|ref|ZP_05665228.1| translation-associated GTPase [Enterococcus faecium 1,231,501] gi|257821431|gb|EEV48561.1| translation-associated GTPase [Enterococcus faecium 1,231,501] Length = 366 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDWRLQRLTELVHPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL H + + H+V +++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNQFLSHIRQVDAICHVVRCFDDD 110 >gi|227550625|ref|ZP_03980674.1| GTP-binding translation factor YchF [Enterococcus faecium TX1330] gi|314940143|ref|ZP_07847323.1| GTP-binding protein YchF [Enterococcus faecium TX0133a04] gi|314943026|ref|ZP_07849830.1| GTP-binding protein YchF [Enterococcus faecium TX0133C] gi|314948144|ref|ZP_07851540.1| GTP-binding protein YchF [Enterococcus faecium TX0082] gi|314953442|ref|ZP_07856360.1| GTP-binding protein YchF [Enterococcus faecium TX0133A] gi|314993819|ref|ZP_07859155.1| GTP-binding protein YchF [Enterococcus faecium TX0133B] gi|314998156|ref|ZP_07863038.1| GTP-binding protein YchF [Enterococcus faecium TX0133a01] gi|227180226|gb|EEI61198.1| GTP-binding translation factor YchF [Enterococcus faecium TX1330] gi|313587868|gb|EFR66713.1| GTP-binding protein YchF [Enterococcus faecium TX0133a01] gi|313591710|gb|EFR70555.1| GTP-binding protein YchF [Enterococcus faecium TX0133B] gi|313594545|gb|EFR73390.1| GTP-binding protein YchF [Enterococcus faecium TX0133A] gi|313598226|gb|EFR77071.1| GTP-binding protein YchF [Enterococcus faecium TX0133C] gi|313640648|gb|EFS05228.1| GTP-binding protein YchF [Enterococcus faecium TX0133a04] gi|313645398|gb|EFS09978.1| GTP-binding protein YchF [Enterococcus faecium TX0082] Length = 370 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 10 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDWRLQRLTELVHPKKTVP 69 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL H + + H+V +++ Sbjct: 70 TTFEFTDIAGIVKGASKGEGLGNQFLSHIRQVDAICHVVRCFDDD 114 >gi|283768264|ref|ZP_06341177.1| GTP-binding protein YchF [Bulleidia extructa W1219] gi|283105141|gb|EFC06512.1| GTP-binding protein YchF [Bulleidia extructa W1219] Length = 367 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 29/145 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T ++ +YPF T+ PN+G+V K Y Sbjct: 6 GIVGLPNVGKSTLFNAITNSQVLAENYPFATIQPNVGVVEVPDYRMEEFVKIFQPKKTIY 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDE 261 F DI G++K A +G G+G++FL + +T ++H+V + E+V+ + I D Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNQFLANIRQTDAIIHVVRCFDDSNIEHVEGSVDPIRD- 124 Query: 262 LSAYNSELRKKIEIVGLSQIDTVDS 286 + N EL L+ +DT+++ Sbjct: 125 IEEINLEL-------CLADLDTIEN 142 >gi|326203524|ref|ZP_08193388.1| GTP-binding protein YchF [Clostridium papyrosolvens DSM 2782] gi|325986344|gb|EGD47176.1| GTP-binding protein YchF [Clostridium papyrosolvens DSM 2782] Length = 364 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 +GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV + Y Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGIVAVPDERLDMLAKMYNPEKIT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL H ++H+V E++ Sbjct: 63 PTVIEFV--DIAGLVKGASKGEGLGNKFLSHIREVDSIVHVVRCFEDS 108 >gi|24378536|ref|NP_720491.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus mutans UA159] gi|24376384|gb|AAN57797.1|AE014853_4 putative GTP-binding protein [Streptococcus mutans UA159] Length = 371 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFIL------ 210 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ + E I+ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDIRLQKLTELIVPKKTVP 65 Query: 211 -----ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREIDAIVHVVRAFNDENV 112 >gi|229824654|ref|ZP_04450723.1| hypothetical protein GCWU000282_02001 [Catonella morbi ATCC 51271] gi|229786025|gb|EEP22139.1| hypothetical protein GCWU000282_02001 [Catonella morbi ATCC 51271] Length = 368 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 17/106 (16%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------ 209 + L GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ + I Sbjct: 1 MTLALTAGIVGLPNVGKSTLFNAITKAGVEAANYPFATIDPNVGIVEVPDQRLIEITKLV 60 Query: 210 -----------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI GI+K A +G G+G++FL H + + H+V Sbjct: 61 KPKKTVPTAIEFTDIAGIVKGASRGEGLGNKFLSHIRQVDAICHVV 106 >gi|188590381|ref|YP_001921601.1| GTP-dependent nucleic acid-binding protein EngD [Clostridium botulinum E3 str. Alaska E43] gi|188500662|gb|ACD53798.1| GTP-binding protein YchF [Clostridium botulinum E3 str. Alaska E43] Length = 365 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K+ Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVSVPDKRLDVLEKMYNTKKKI 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 Y DI G++K A +G G+G++FL + ++H+V +ENV Sbjct: 63 YTAIEFYDIAGLVKGASKGEGLGNKFLANIREVESIVHVVRCFDDENV 110 >gi|288930576|ref|YP_003434636.1| hypothetical protein Ferp_0174 [Ferroglobus placidus DSM 10642] gi|288892824|gb|ADC64361.1| GTPase of unknown function domain protein [Ferroglobus placidus DSM 10642] Length = 385 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 23/108 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 +IG+ G PNAGKSTF + T A +IADYPFTT+ PN+G+ Sbjct: 3 EIGLAGKPNAGKSTFFKASTMADAEIADYPFTTIEPNVGVAYVRVECVCKELEVYPCGNC 62 Query: 203 -EGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 EG++ FI + D+ G++ AH+G G+G+ FL + + ++H+V A Sbjct: 63 VEGWR-FIPVKIIDVAGLVPEAHKGRGLGNAFLDNLRQADAIIHVVDA 109 >gi|239828697|ref|YP_002951321.1| GTP-dependent nucleic acid-binding protein EngD [Geobacillus sp. WCH70] gi|239808990|gb|ACS26055.1| GTP-binding protein YchF [Geobacillus sp. WCH70] Length = 366 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKE----- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E +K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGIVEVPDERLKVLTEMFKPQRTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL H + + +V +EN+ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFTDENI 112 >gi|15674254|ref|NP_268427.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pyogenes M1 GAS] gi|71909818|ref|YP_281368.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus pyogenes MGAS5005] gi|13621329|gb|AAK33149.1| putative GTP-binding protein [Streptococcus pyogenes M1 GAS] gi|71852600|gb|AAZ50623.1| GTP-binding protein [Streptococcus pyogenes MGAS5005] Length = 371 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASRGEGLGNKFLANIREIDAIVHVVRAFDDENV 112 >gi|169335900|ref|ZP_02863093.1| hypothetical protein ANASTE_02335 [Anaerofustis stercorihominis DSM 17244] gi|169258638|gb|EDS72604.1| hypothetical protein ANASTE_02335 [Anaerofustis stercorihominis DSM 17244] Length = 364 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IG++GLPN GKST ++T+A +YPF T+ PN+G+V K Sbjct: 3 IGLVGLPNVGKSTLFNALTKANAGAENYPFCTIEPNVGVVNVPDYRIDNLSKLYDTLKTI 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y DI G++KNA +G G+G++FL + H +L +V ++ Sbjct: 63 YATVEFVDIAGLVKNAGKGEGLGNQFLSNIRNVHAILQVVRCFDD 107 >gi|210622326|ref|ZP_03293095.1| hypothetical protein CLOHIR_01043 [Clostridium hiranonis DSM 13275] gi|210154314|gb|EEA85320.1| hypothetical protein CLOHIR_01043 [Clostridium hiranonis DSM 13275] Length = 365 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGY--KEFI 209 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V KE Y K+ + Sbjct: 3 LGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNIGVVSVPDPRLDKLKELYNSKKIV 62 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 63 QTAIEFCDIAGLVKGASKGEGLGNKFLSNIREVDAIVHVVRCFED 107 >gi|171915805|ref|ZP_02931275.1| translation-associated GTPase [Verrucomicrobium spinosum DSM 4136] Length = 371 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 27/150 (18%) Query: 163 GIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST +VTR K + A+YPF T+ PN G+V G ++ I Sbjct: 5 GIVGLPNVGKSTLFNAVTRTRKAEAANYPFCTIEPNQGVVVVPDERLEALSKISGSQKLI 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 A DI G++K A QG G+G++FL H ++H+V E + +D + Sbjct: 65 PAAIEFVDIAGLVKGASQGEGLGNQFLSHIREVDAIVHVVRCFESSDIHHVDGNVDPV-- 122 Query: 265 YNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 + IE++ +++ D D++A++K+ Sbjct: 123 ------RDIEVIN-TELILADMDSVAKRKS 145 >gi|299135995|ref|ZP_07029179.1| GTP-binding protein YchF [Acidobacterium sp. MP5ACTX8] gi|298602119|gb|EFI58273.1| GTP-binding protein YchF [Acidobacterium sp. MP5ACTX8] Length = 366 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 21/103 (20%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T +K + A+YPF T+ PN+GIV Sbjct: 4 NCGIVGLPNVGKSTIFNALTASKAQAANYPFCTIDPNVGIVPVPDVRMDRIVTMVKPNSI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 EF+ DI GI++ A +G G+G++FL H +T +LH+V Sbjct: 64 VPTTMEFV--DIAGIVEGASKGEGLGNQFLSHIRQTDAILHVV 104 >gi|2909718|gb|AAC12968.1| putative GTP binding protein [Lactococcus lactis subsp. cremoris MG1363] Length = 214 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 18/108 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLNKLTELIKPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQ 252 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASRGEGLGNKFLANIREVDAIIHVVRAFDDENVM 113 >gi|163791207|ref|ZP_02185624.1| translation-associated GTPase [Carnobacterium sp. AT7] gi|159873538|gb|EDP67625.1| translation-associated GTPase [Carnobacterium sp. AT7] Length = 366 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGVVEVPDYRLTRLTELVSPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL + + + H+V E++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIRQVDAICHVVRCFEDD 110 >gi|328958777|ref|YP_004376163.1| GTP-dependent nucleic acid-binding protein EngD [Carnobacterium sp. 17-4] gi|328675101|gb|AEB31147.1| GTP-dependent nucleic acid-binding protein EngD [Carnobacterium sp. 17-4] Length = 366 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGVVEVPDYRLTRLTELVSPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL + + + H+V E++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIRQVDAICHVVRCFEDD 110 >gi|39995770|ref|NP_951721.1| GTP-dependent nucleic acid-binding protein EngD [Geobacter sulfurreducens PCA] gi|39982534|gb|AAR33994.1| GTP binding protein YchF [Geobacter sulfurreducens PCA] Length = 364 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 27/145 (18%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T A + A+YPF T+ PN+GIV+ + E + Sbjct: 4 NCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVQVPDVRLDRLAEIVSPERI 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 DI G++K A QG G+G++FL H ++H+V E ENV + L Sbjct: 64 LPTTIEFVDIAGLVKGASQGEGLGNQFLGHIRSVDAIVHVVRCFEDENVVHVSGSVDPLR 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVD 285 ++ +EL L+ +D+VD Sbjct: 124 DIDIIQTEL-------ALADLDSVD 141 >gi|302838235|ref|XP_002950676.1| hypothetical protein VOLCADRAFT_37752 [Volvox carteri f. nagariensis] gi|300264225|gb|EFJ48422.1| hypothetical protein VOLCADRAFT_37752 [Volvox carteri f. nagariensis] Length = 87 Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%) Query: 167 LPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAG 225 LPNAGKST L +T A+ K+ Y FTT+ P LG I+ + ++ADIPG+++ AH G Sbjct: 1 LPNAGKSTLLGGITAARAKVGSYAFTTVRPQLGTIIYDDGCRLVVADIPGLVQGAHANRG 60 Query: 226 IGDRFLKHTERTHVLLHIV 244 G+ FL+H ER + +V Sbjct: 61 HGNAFLRHIERCRCMAFVV 79 >gi|317473243|ref|ZP_07932540.1| GTP-binding protein YchF [Anaerostipes sp. 3_2_56FAA] gi|316899338|gb|EFV21355.1| GTP-binding protein YchF [Anaerostipes sp. 3_2_56FAA] Length = 365 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGY--KEFI 209 +GI+GLPN GKST S+T+A + A+YPF T+ PN+GIV E Y K+ I Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGIVTVPDKRLDVLSEMYHSKKVI 62 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 A DI G++K A +G G+G++FL + ++H+V E EN+ Sbjct: 63 PAVIEFVDIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDENI 110 >gi|291166087|gb|EFE28133.1| GTP-binding protein YchF [Filifactor alocis ATCC 35896] Length = 365 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +GI GLPN GKST ++T A + A+YPF T+ PN+G+V Sbjct: 3 LGIAGLPNVGKSTLFNAITNAGAESANYPFCTIEPNVGVVSVPDERLEVLAKIYESKKIV 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y EF DI G++K A +G G+G++FL H ++H+V E++ Sbjct: 63 PTYIEFY--DIAGLVKGASKGEGLGNKFLSHIREVEAIVHVVRCFEDD 108 >gi|298504780|gb|ADI83503.1| GTP-dependent translational factor YchF, putative [Geobacter sulfurreducens KN400] Length = 364 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 27/145 (18%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T A + A+YPF T+ PN+GIV+ + E + Sbjct: 4 NCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVQVPDVRLDRLAEIVSPERI 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 DI G++K A QG G+G++FL H ++H+V E ENV + L Sbjct: 64 LPTTIEFVDIAGLVKGASQGEGLGNQFLGHIRSVDAIVHVVRCFEDENVVHVSGSVDPLR 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVD 285 ++ +EL L+ +D+VD Sbjct: 124 DIDIIQTEL-------ALADLDSVD 141 >gi|32491100|ref|NP_871354.1| GTP-dependent nucleic acid-binding protein EngD [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166307|dbj|BAC24497.1| ychF [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 357 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 24/131 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VK 202 IGIIGLPN GKST ++T ++ K ++PF T+ PN+ I + Sbjct: 5 IGIIGLPNVGKSTLFNALTNSQVKAKNFPFCTIKPNIAIAPVPDVRLFKLKNIVKSKKIV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENV--QAAY-QCIL 259 + EFI DI G++K A +G G+G+ FL +V+ H++ E + ++ Y + IL Sbjct: 65 PNFIEFI--DIAGLVKGASKGEGLGNSFLNQIRNVNVVCHVIECFSEKLISKSEYVKNIL 122 Query: 260 DELSAYNSELR 270 ++ N ELR Sbjct: 123 KDIKIINDELR 133 >gi|67593816|ref|XP_665752.1| GTP-binding protein [Cryptosporidium hominis TU502] gi|54656570|gb|EAL35521.1| GTP-binding protein [Cryptosporidium hominis] Length = 432 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 24/107 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------- 201 IG +G P++GKSTF +S+T KI +YPFTT+ PN+GI Sbjct: 10 IGCVGKPSSGKSTFFSSITDNAAKIGNYPFTTIEPNVGITHYIAECPCKKYNVICKPKYG 69 Query: 202 --KEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 GY+ + DI G+I AH G G+G++FL HVLLHI+ Sbjct: 70 NCNNGYRYVPIKMLDIAGLIPGAHLGNGLGNKFLDDLRHAHVLLHII 116 >gi|315640397|ref|ZP_07895510.1| GTP-dependent nucleic acid-binding protein EngD [Enterococcus italicus DSM 15952] gi|315483853|gb|EFU74336.1| GTP-dependent nucleic acid-binding protein EngD [Enterococcus italicus DSM 15952] Length = 366 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDWRLQRLTELVRPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI++ A +G G+G++FL H + + H+V +++ Sbjct: 66 TTFEFTDIAGIVRGASKGEGLGNQFLSHIRQVDAICHVVRCFDDD 110 >gi|163816699|ref|ZP_02208062.1| hypothetical protein COPEUT_02889 [Coprococcus eutactus ATCC 27759] gi|158447956|gb|EDP24951.1| hypothetical protein COPEUT_02889 [Coprococcus eutactus ATCC 27759] Length = 365 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 +GI+GLPN GKST S+T+A + A+YPF T+ PN+GIV E Y Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGIVAVPDERLDRLTEMYNSAKTT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 63 PAVIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDT 108 >gi|257866238|ref|ZP_05645891.1| translation-associated GTPase [Enterococcus casseliflavus EC30] gi|257873248|ref|ZP_05652901.1| translation-associated GTPase [Enterococcus casseliflavus EC10] gi|257875873|ref|ZP_05655526.1| translation-associated GTPase [Enterococcus casseliflavus EC20] gi|325567662|ref|ZP_08144329.1| GTP-dependent nucleic acid-binding protein EngD [Enterococcus casseliflavus ATCC 12755] gi|257800196|gb|EEV29224.1| translation-associated GTPase [Enterococcus casseliflavus EC30] gi|257807412|gb|EEV36234.1| translation-associated GTPase [Enterococcus casseliflavus EC10] gi|257810039|gb|EEV38859.1| translation-associated GTPase [Enterococcus casseliflavus EC20] gi|325159095|gb|EGC71241.1| GTP-dependent nucleic acid-binding protein EngD [Enterococcus casseliflavus ATCC 12755] Length = 366 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDWRLQRLTELVRPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI++ A +G G+G++FL H + + H+V +++ Sbjct: 66 TTFEFTDIAGIVRGASKGEGLGNQFLSHIRQVDAICHVVRCFDDD 110 >gi|167745325|ref|ZP_02417452.1| hypothetical protein ANACAC_00016 [Anaerostipes caccae DSM 14662] gi|167655046|gb|EDR99175.1| hypothetical protein ANACAC_00016 [Anaerostipes caccae DSM 14662] Length = 376 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGY--KEFI 209 +GI+GLPN GKST S+T+A + A+YPF T+ PN+GIV E Y K+ I Sbjct: 14 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGIVTVPDKRLDVLSEMYHSKKVI 73 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 A DI G++K A +G G+G++FL + ++H+V E EN+ Sbjct: 74 PAVIEFVDIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDENI 121 >gi|261206905|ref|ZP_05921594.1| translation-associated GTPase [Enterococcus faecium TC 6] gi|289567296|ref|ZP_06447675.1| GTP-binding protein YchF [Enterococcus faecium D344SRF] gi|294616671|ref|ZP_06696442.1| GTP-binding protein YchF [Enterococcus faecium E1636] gi|260078533|gb|EEW66235.1| translation-associated GTPase [Enterococcus faecium TC 6] gi|289160915|gb|EFD08836.1| GTP-binding protein YchF [Enterococcus faecium D344SRF] gi|291590491|gb|EFF22229.1| GTP-binding protein YchF [Enterococcus faecium E1636] Length = 366 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNIGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDWRLQRLTELVHPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL H + + H+V +++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNQFLSHIRQVDAICHVVRCFDDD 110 >gi|149182307|ref|ZP_01860786.1| translation-associated GTPase [Bacillus sp. SG-1] gi|148849999|gb|EDL64170.1| translation-associated GTPase [Bacillus sp. SG-1] Length = 366 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 33/195 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAESANYPFCTIDPNVGIVEVPDYRLDKLTELVQPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL H + + +V ++N+ + LD++ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFADDNITHVSGKVNPLDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELATQCGQVPFEFSSITGHGIP- 316 N EL L+ +++VD LA++K++ A ++ + G P Sbjct: 126 EVINLELI-------LADLESVDKRIARVQKLAKQKDKEAAYEHEILLKLKEAFEEGRPA 178 Query: 317 QILECLHDKIFSIRG 331 + +E +++ ++G Sbjct: 179 RTVEFTEEQMKVVKG 193 >gi|171920784|ref|ZP_02931974.1| GTP-binding protein YchF [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185178815|ref|ZP_02964606.1| GTP-binding protein YchF [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024408|ref|ZP_02997068.1| GTP-binding protein YchF [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518425|ref|ZP_03003917.1| GTP-binding protein YchF [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524218|ref|ZP_03004277.1| GTP-binding protein YchF [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867428|ref|ZP_03079432.1| GTP-binding protein YchF [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273348|ref|ZP_03205884.1| GTP-binding protein YchF [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554109|ref|YP_002285050.1| GTP-dependent nucleic acid-binding protein EngD [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550552|ref|ZP_03771501.1| GTP-binding protein YchF [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551421|ref|ZP_03772367.1| GTP-binding protein YchF [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903543|gb|EDT49832.1| GTP-binding protein YchF [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209446|gb|EDU06489.1| GTP-binding protein YchF [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018686|gb|EDU56726.1| GTP-binding protein YchF [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998251|gb|EDU67348.1| GTP-binding protein YchF [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195660076|gb|EDX53456.1| GTP-binding protein YchF [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660904|gb|EDX54157.1| GTP-binding protein YchF [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249868|gb|EDY74648.1| GTP-binding protein YchF [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541610|gb|ACI59839.1| GTP-binding protein YchF [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379236|gb|EEH01601.1| GTP-binding protein YchF [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379706|gb|EEH02068.1| GTP-binding protein YchF [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 368 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T +K + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNTITNSKVEAANYPFATIEPNVGIVNINDSRLKKLASLVIPDKIVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F DI G++K A QG G+G++FL + + + H+V ++ Sbjct: 66 TTFKFVDIAGLVKGASQGEGLGNQFLSNIREVNAICHVVRCFDD 109 >gi|154485079|ref|ZP_02027527.1| hypothetical protein EUBVEN_02802 [Eubacterium ventriosum ATCC 27560] gi|149734032|gb|EDM50151.1| hypothetical protein EUBVEN_02802 [Eubacterium ventriosum ATCC 27560] Length = 395 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 21/111 (18%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--------------- 202 LI +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V Sbjct: 29 LIMKLGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVAVPDERIDKLTALYNS 88 Query: 203 ----EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 89 KKTIPAVIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFED 137 >gi|32398750|emb|CAD98710.1| GTP-binding protein, probable [Cryptosporidium parvum] Length = 432 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 24/107 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------- 201 IG +G P++GKSTF +S+T KI +YPFTT+ PN+GI Sbjct: 10 IGCVGKPSSGKSTFFSSITDNPAKIGNYPFTTIEPNVGITHYIAECPCKKYNVICKPKYG 69 Query: 202 --KEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 GY+ + DI G+I AH G G+G++FL HVLLHI+ Sbjct: 70 NCNNGYRYVPIKMLDIAGLIPGAHLGNGLGNKFLDDLRHAHVLLHII 116 >gi|220933169|ref|YP_002510077.1| GTP-binding protein YchF [Halothermothrix orenii H 168] gi|219994479|gb|ACL71082.1| GTP-binding protein YchF [Halothermothrix orenii H 168] Length = 364 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 22/110 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 IGI+GLPN GKST ++TRA+ A+YPF T+ PN+G+V E Y+ Sbjct: 3 IGIVGLPNVGKSTLFNALTRARADAANYPFCTIDPNVGVVNVPDPRLEVLNEMYQPAKKT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G+++ A +G G+G++FL H + +V +ENV Sbjct: 63 PTTIEFV--DIAGLVRGASKGEGLGNQFLAHIREVEAIAQVVRCFTDENV 110 >gi|153953805|ref|YP_001394570.1| GTP-dependent nucleic acid-binding protein EngD [Clostridium kluyveri DSM 555] gi|219854421|ref|YP_002471543.1| hypothetical protein CKR_1078 [Clostridium kluyveri NBRC 12016] gi|146346686|gb|EDK33222.1| Predicted GTP-binding protein [Clostridium kluyveri DSM 555] gi|219568145|dbj|BAH06129.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 365 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA---------- 211 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K + Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVSVPDKRLDVLEKMYSSKKKI 62 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 DI G++K A +G G+G++FL H ++H+V E EN+ Sbjct: 63 PTAIEFYDIAGLVKGASRGEGLGNKFLSHIREVESIVHVVRCFEDENI 110 >gi|66475434|ref|XP_627533.1| MJ1332/Ygr210cp-like GTP binding protein; GTpase OBG family plus RNA binding domain TGS [Cryptosporidium parvum Iowa II] gi|46229282|gb|EAK90131.1| MJ1332/Ygr210cp-like GTP binding protein; GTpase OBG family plus RNA binding domain TGS [Cryptosporidium parvum Iowa II] Length = 443 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 24/107 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------- 201 IG +G P++GKSTF +S+T KI +YPFTT+ PN+GI Sbjct: 21 IGCVGKPSSGKSTFFSSITDNPAKIGNYPFTTIEPNVGITHYIAECPCKKYNVICKPKYG 80 Query: 202 --KEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 GY+ + DI G+I AH G G+G++FL HVLLHI+ Sbjct: 81 NCNNGYRYVPIKMLDIAGLIPGAHLGNGLGNKFLDDLRHAHVLLHII 127 >gi|329929033|ref|ZP_08282835.1| GTP-binding protein YchF [Paenibacillus sp. HGF5] gi|328937022|gb|EGG33451.1| GTP-binding protein YchF [Paenibacillus sp. HGF5] Length = 366 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLDKLTELVQPNKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 F DI G+++ A +G G+G++FL H ++H+V E EN+ Sbjct: 66 TAFEFVDIAGLVRGASKGEGLGNKFLAHIREVDAIVHVVRCFEDENI 112 >gi|307244153|ref|ZP_07526271.1| GTP-binding protein YchF [Peptostreptococcus stomatis DSM 17678] gi|306492524|gb|EFM64559.1| GTP-binding protein YchF [Peptostreptococcus stomatis DSM 17678] Length = 365 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K+ Y Sbjct: 3 LGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVSVPDNRLNKLKDLYNSKKIV 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E++ Sbjct: 63 QTAIEFV--DIAGLVKGASKGEGLGNKFLSNIREVDAIVHVVRCFEDS 108 >gi|261409699|ref|YP_003245940.1| GTP-binding protein YchF [Paenibacillus sp. Y412MC10] gi|261286162|gb|ACX68133.1| GTP-binding protein YchF [Paenibacillus sp. Y412MC10] Length = 366 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLDKLTELVQPNKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 F DI G+++ A +G G+G++FL H ++H+V E EN+ Sbjct: 66 TAFEFVDIAGLVRGASKGEGLGNKFLAHIREVDAIVHVVRCFEDENI 112 >gi|326804284|ref|YP_004322102.1| GTP-binding protein YchF [Aerococcus urinae ACS-120-V-Col10a] gi|326651413|gb|AEA01596.1| GTP-binding protein YchF [Aerococcus urinae ACS-120-V-Col10a] Length = 365 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 33/167 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK------ 206 GI+GLPN GKST ++T+++ + A+YPF T+ PN+G+V+ E Y+ Sbjct: 6 GIVGLPNVGKSTLFNAITKSQVEAANYPFATIDPNVGVVEVPDQRLWKLSEIYQPKKTIP 65 Query: 207 -EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAY 255 F DI GI+K A +G G+G++FL + + H+V ++ N Q Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAICHVVRCFDDGNITHVSGGINPQDDI 125 Query: 256 QCI-----LDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNEL 296 + I L +L + N K +++ D V +++TL + K L Sbjct: 126 ETINLELVLADLESVNKRYEKAVKMAKSKDHDAVTEANTLKKLKEAL 172 >gi|298492272|ref|YP_003722449.1| GTP-binding protein YchF ['Nostoc azollae' 0708] gi|298234190|gb|ADI65326.1| GTP-binding protein YchF ['Nostoc azollae' 0708] Length = 363 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 42/106 (39%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V AK + A++PF T+ PN+GIV K+ I Sbjct: 5 GIVGLPNVGKSTLFNAVVANAKAEAANFPFCTIEPNVGIVSVPDDRLNVLARIATSKQII 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI G++K A QG G+G++FL H ++H+V E + Sbjct: 65 PARVEFVDIAGLVKGASQGEGLGNQFLSHIREVDAIVHVVRCFEND 110 >gi|226226614|ref|YP_002760720.1| GTP-binding protein [Gemmatimonas aurantiaca T-27] gi|226089805|dbj|BAH38250.1| GTP-binding protein [Gemmatimonas aurantiaca T-27] Length = 366 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +GI+GLPN GKST ++T AK + A+YPF T+ PN+G+V+ Sbjct: 4 LGIVGLPNVGKSTLFNALTSAKAEAANYPFCTVEPNVGMVEVPDARLTRLAEIVQPKRTV 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 +F+ DI G++K A QG G+G++FL++ T ++H++ ++ Sbjct: 64 PAVVQFV--DIAGLVKGASQGEGLGNKFLQNIRETDAIVHVIRCFADD 109 >gi|315649893|ref|ZP_07902975.1| GTP-binding protein YchF [Paenibacillus vortex V453] gi|315274692|gb|EFU38074.1| GTP-binding protein YchF [Paenibacillus vortex V453] Length = 366 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLDKLTELVQPNKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 F DI G+++ A +G G+G++FL H ++H+V E EN+ Sbjct: 66 TAFEFVDIAGLVRGASKGEGLGNKFLAHIREVDAIVHVVRCFEDENI 112 >gi|289423068|ref|ZP_06424883.1| GTP-binding protein YchF [Peptostreptococcus anaerobius 653-L] gi|289156399|gb|EFD05049.1| GTP-binding protein YchF [Peptostreptococcus anaerobius 653-L] Length = 365 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K+ Y Sbjct: 3 LGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVSVPDQRLNVLKDLYNSKKIV 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E++ Sbjct: 63 QTAIEFV--DIAGLVKGASKGEGLGNKFLSNIREVDAIVHVVRCFEDS 108 >gi|254994988|ref|ZP_05277178.1| GTPase ObgE [Anaplasma marginale str. Mississippi] Length = 84 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 47/84 (55%), Positives = 63/84 (75%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M F+DEAK++++ G GG G +SFRREKFIEFGGPDGG+GG GG V A+S +NTL+ FR Sbjct: 1 MSFVDEAKIHVKGGKGGDGCVSFRREKFIEFGGPDGGNGGNGGSVIFIASSAVNTLLYFR 60 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGE 84 Y QH +A++G+ G + + GA G Sbjct: 61 YNQHIRAENGKAGSGKGKFGAAGR 84 >gi|315660044|ref|ZP_07912902.1| GTP-binding protein YchF [Staphylococcus lugdunensis M23590] gi|315494945|gb|EFU83282.1| GTP-binding protein YchF [Staphylococcus lugdunensis M23590] Length = 365 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 32/160 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDTRLDKLTEMVEPKKTIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQ--AAYQCILDEL 262 F DI GI+K A +G G+G++FL H + +V A ++NV A L+++ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDDNVTHVAGRVNPLEDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELA 297 N EL L+ +++V+ + +AR+K++ A Sbjct: 126 EVINMELV-------LADLESVEKRLPRIEKMARQKDKTA 158 >gi|313885419|ref|ZP_07819169.1| GTP-binding protein YchF [Eremococcus coleocola ACS-139-V-Col8] gi|312619149|gb|EFR30588.1| GTP-binding protein YchF [Eremococcus coleocola ACS-139-V-Col8] Length = 366 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGVEAANYPFATIDPNVGVVEVPDKRLDDITKIVNPKKTVA 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F DI GI+K A +G G+G++FL + + + H+V E+ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSNIRQVDAICHVVRCFED 109 >gi|302339539|ref|YP_003804745.1| GTP-binding protein YchF [Spirochaeta smaragdinae DSM 11293] gi|301636724|gb|ADK82151.1| GTP-binding protein YchF [Spirochaeta smaragdinae DSM 11293] Length = 369 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 21/108 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST +++T A + A+YPF T+ PN+GIV Sbjct: 4 NCGIVGLPNVGKSTIFSALTSAPAEAANYPFCTIDPNVGIVSVPDPRLDHIVELIPPKKV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G+RFL H V+ H+V E+ Sbjct: 64 VPAIVEFV--DIAGLVAGASKGEGLGNRFLSHIREVGVIAHVVRCFED 109 >gi|17228218|ref|NP_484766.1| GTP-dependent nucleic acid-binding protein EngD [Nostoc sp. PCC 7120] gi|17130068|dbj|BAB72680.1| all0723 [Nostoc sp. PCC 7120] Length = 363 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V AK + A++PF T+ PN+G+V G + I Sbjct: 5 GIVGLPNVGKSTLFNAVVANAKAEAANFPFCTIEPNVGVVAVPDERLNVLSQISGSAQII 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI G++K A QG G+G++FL H ++H+V E + Sbjct: 65 PARVEFVDIAGLVKGASQGEGLGNQFLSHIREVDAIVHVVRCFEND 110 >gi|182417145|ref|ZP_02948518.1| GTP-binding protein YchF [Clostridium butyricum 5521] gi|237668098|ref|ZP_04528082.1| GTP-binding protein YchF [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378987|gb|EDT76493.1| GTP-binding protein YchF [Clostridium butyricum 5521] gi|237656446|gb|EEP54002.1| GTP-binding protein YchF [Clostridium butyricum E4 str. BoNT E BL5262] Length = 365 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +G++GLPN GKST ++T+A + A+YPF T+ PN+G+V K+ Sbjct: 3 LGMVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVSVPDKRLDVLEKMYNTKKKV 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 Y DI G++K A +G G+G++FL + ++H+V +ENV Sbjct: 63 YTAIEFYDIAGLVKGASKGEGLGNKFLANIREVAAIVHVVRCFDDENV 110 >gi|78044617|ref|YP_358903.1| GTP-dependent nucleic acid-binding protein EngD [Carboxydothermus hydrogenoformans Z-2901] gi|77996732|gb|ABB15631.1| GTP-binding protein YchF [Carboxydothermus hydrogenoformans Z-2901] Length = 362 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 17/101 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 +IGI+GLPN GKST ++T+AK + A+YPF T+ PN+G+V+ + E + Sbjct: 2 EIGIVGLPNVGKSTLFNAITKAKAEAANYPFCTIEPNVGVVEVPDPRVDKIAEVVKPERV 61 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI G+++ A +G G+G++FL H + + H+V Sbjct: 62 VRAVTRFVDIAGLVRGASRGEGLGNKFLSHIRQVDGIAHVV 102 >gi|312601295|gb|ADQ90550.1| GTP-binding protein YchF [Mycoplasma hyopneumoniae 168] Length = 367 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 78/166 (46%), Gaps = 29/166 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 G+IGLPN GKS+ +++T+ IA+YPF T+ PN+ V K + Sbjct: 6 GLIGLPNVGKSSLFSALTKMNVGIANYPFATIEPNIATVEIHDPRILQLTKIVKPEKTVF 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDE 261 + DI G+IK A G G+G++FL + L+HIV ++ +V I D Sbjct: 66 ATYSFVDIAGLIKGASTGEGLGNKFLANVRNVDCLVHIVRCFQDPKIIHVNNEINPIFD- 124 Query: 262 LSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF 307 + N EL L I T+ S LA+K N T QV FEF Sbjct: 125 IQTINLELI----FADLGTIQTIIS-RLAKKANN--TNDKQVKFEF 163 >gi|326791428|ref|YP_004309249.1| GTP-binding protein YchF [Clostridium lentocellum DSM 5427] gi|326542192|gb|ADZ84051.1| GTP-binding protein YchF [Clostridium lentocellum DSM 5427] Length = 364 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Y Sbjct: 3 LGIVGLPNVGKSTLFNALTKAGAESANYPFCTIEPNVGVVAVPDKRLEVLKNMYNSQRVL 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL H ++ +V E++ Sbjct: 63 PAAIEFV--DIAGLIKGASKGEGLGNQFLSHIREVDAIVQVVRCFEDD 108 >gi|75910821|ref|YP_325117.1| GTP-dependent nucleic acid-binding protein EngD [Anabaena variabilis ATCC 29413] gi|75704546|gb|ABA24222.1| GTP-binding protein, HSR1-related protein [Anabaena variabilis ATCC 29413] Length = 363 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V AK + A++PF T+ PN+G+V G + I Sbjct: 5 GIVGLPNVGKSTLFNAVVANAKAEAANFPFCTIEPNVGVVAVPDERLNVLSQISGSAQII 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI G++K A QG G+G++FL H ++H+V E + Sbjct: 65 PARVEFVDIAGLVKGASQGEGLGNQFLSHIREVDAIVHVVRCFEND 110 >gi|289551784|ref|YP_003472688.1| GTP-binding and nucleic acid-binding protein YchF [Staphylococcus lugdunensis HKU09-01] gi|289181315|gb|ADC88560.1| GTP-binding and nucleic acid-binding protein YchF [Staphylococcus lugdunensis HKU09-01] Length = 365 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 32/160 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDTRLDKLTEMVEPKKTIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQ--AAYQCILDEL 262 F DI GI+K A +G G+G++FL H + +V A ++NV A L+++ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDDNVTHVAGRVNPLEDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELA 297 N EL L+ +++V+ + +AR+K++ A Sbjct: 126 EVINMELV-------LADLESVEKRLPRIEKMARQKDKTA 158 >gi|284047524|ref|YP_003397863.1| GTP-binding protein YchF [Acidaminococcus fermentans DSM 20731] gi|283951745|gb|ADB46548.1| GTP-binding protein YchF [Acidaminococcus fermentans DSM 20731] Length = 369 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 23/109 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--------------------I 200 ++GI+GLPN GKST ++T+A + A+YPF T+ PN+G I Sbjct: 7 EMGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVDVPDARLKVLADMFHSKKI 66 Query: 201 VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 V G K DI G++K A +G G+G++FL H +T + +V E+ Sbjct: 67 VPAGMK---FVDIAGLVKGASKGEGLGNKFLSHIRQTDAIAEVVRCFED 112 >gi|323342317|ref|ZP_08082549.1| GTP-dependent nucleic acid-binding protein EngD [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463429|gb|EFY08623.1| GTP-dependent nucleic acid-binding protein EngD [Erysipelothrix rhusiopathiae ATCC 19414] Length = 367 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 17/99 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+++ + A+YPF T+ PN+G+VK + ++FI Sbjct: 6 GIVGLPNVGKSTLFNAITKSQVEAANYPFATIAPNVGVVKVNDPRLDTIQKFIESKKIIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI G++K A +G G+G++FL + ++H+V Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNQFLSNIREVDAIVHVV 104 >gi|167464539|ref|ZP_02329628.1| translation-associated GTPase [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383120|ref|ZP_08056947.1| EngD-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152782|gb|EFX45408.1| EngD-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 366 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE--------------- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ + Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLQKLADIVVPNRIVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F DI G++K A +G G+G++FL H ++H+V E+ Sbjct: 66 TAFEFVDIAGLVKGASKGEGLGNKFLAHIREVDAIVHVVRCFED 109 >gi|319940211|ref|ZP_08014564.1| GTP-binding protein [Streptococcus anginosus 1_2_62CV] gi|319810682|gb|EFW07012.1| GTP-binding protein [Streptococcus anginosus 1_2_62CV] Length = 371 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G V K+ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGRVEVPDARLDKLTELIKPQKKVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|325291435|ref|YP_004267616.1| GTP-binding protein YchF [Syntrophobotulus glycolicus DSM 8271] gi|324966836|gb|ADY57615.1| GTP-binding protein YchF [Syntrophobotulus glycolicus DSM 8271] Length = 366 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 30/154 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------KEGYK-------- 206 +GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K+ K Sbjct: 5 VGIVGLPNVGKSTLFNAITKAGAESANYPFCTIDPNVGIVHVPDDRLKQLAKIVSPDRIV 64 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 EF+ DI G+++ A +G G+G++FL H ++H+V ++ + +D + Sbjct: 65 PAAVEFV--DIAGLVRGASKGEGLGNQFLSHIREVDAIVHVVRCFQDENVVHVEGFIDPV 122 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 + IE + + I D D + R++ +L Sbjct: 123 --------RDIETIKMELI-LADMDAVQRRQAKL 147 >gi|253574237|ref|ZP_04851579.1| GTP-binding protein YchF [Paenibacillus sp. oral taxon 786 str. D14] gi|251846714|gb|EES74720.1| GTP-binding protein YchF [Paenibacillus sp. oral taxon 786 str. D14] Length = 366 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFIL------ 210 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ + E ++ Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDERLDKLTELVVPNRTVP 65 Query: 211 -----ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 DI G+++ A +G G+G++FL H ++H+V E EN+ Sbjct: 66 TAFEFVDIAGLVRGASKGEGLGNKFLAHIREVDAIVHVVRCFEDENI 112 >gi|327463838|gb|EGF10154.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus sanguinis SK1057] gi|327467734|gb|EGF13228.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus sanguinis SK330] Length = 371 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G V K+ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGRVEVPDARLDKLTELIKPQKKVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|257871371|ref|ZP_05651024.1| translation-associated GTPase [Enterococcus gallinarum EG2] gi|257805535|gb|EEV34357.1| translation-associated GTPase [Enterococcus gallinarum EG2] Length = 366 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDWRLQRLTELVHPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI++ A +G G+G++FL H + + H+V +++ Sbjct: 66 TTFEFTDIAGIVRGASKGEGLGNQFLSHIRQVDAICHVVRCFDDD 110 >gi|315222840|ref|ZP_07864725.1| GTP-binding protein YchF [Streptococcus anginosus F0211] gi|315188076|gb|EFU21806.1| GTP-binding protein YchF [Streptococcus anginosus F0211] Length = 371 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G V K+ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGRVEVPDARLDKLTELIKPQKKVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|313157990|gb|EFR57396.1| GTP-binding protein YchF [Alistipes sp. HGB5] Length = 366 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ + + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDRRLVRLAEIDKPKRVIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++K A +G G+G++FL + TH ++H++ + Sbjct: 66 TTIEIVDIAGLVKGASKGEGLGNKFLANIRNTHAIIHVLRCFD 108 >gi|125716892|ref|YP_001034025.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus sanguinis SK36] gi|125496809|gb|ABN43475.1| GTP-binding protein, putative [Streptococcus sanguinis SK36] Length = 371 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G V K+ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGRVEVPDARLDKLTELIKPQKKVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|78224041|ref|YP_385788.1| GTP-dependent nucleic acid-binding protein EngD [Geobacter metallireducens GS-15] gi|78195296|gb|ABB33063.1| GTP-binding protein, HSR1-related:conserved hypothetical protein [Geobacter metallireducens GS-15] Length = 364 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 18/109 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T A + A+YPF T+ PN+GIV+ E E + Sbjct: 4 NCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVQVPDERLERLAEIVNPERI 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI G++K A QG G+G++FL H ++H+V +ENV Sbjct: 64 LPTTIEFVDIAGLVKGASQGEGLGNQFLGHIRSVDAIVHVVRCFDDENV 112 >gi|332359492|gb|EGJ37311.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus sanguinis SK1056] Length = 371 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G V K+ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGRVEVPDDRLDKLTELIKPQKKVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|157151596|ref|YP_001451367.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus gordonii str. Challis substr. CH1] gi|157076390|gb|ABV11073.1| GTP-binding protein [Streptococcus gordonii str. Challis substr. CH1] Length = 371 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G V K+ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGRVEVPDARLDKLTELIKPQKKVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|226323787|ref|ZP_03799305.1| hypothetical protein COPCOM_01562 [Coprococcus comes ATCC 27758] gi|225207971|gb|EEG90325.1| hypothetical protein COPCOM_01562 [Coprococcus comes ATCC 27758] Length = 349 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY--KEFI 209 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V E Y K+ I Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVTVPDERLNVLGEMYHTKKII 62 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI G++K A +G G+G++FL + ++H+V E++ Sbjct: 63 PAAIEFVDIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDS 108 >gi|262281638|ref|ZP_06059407.1| translation-associated GTPase [Streptococcus sp. 2_1_36FAA] gi|262262092|gb|EEY80789.1| translation-associated GTPase [Streptococcus sp. 2_1_36FAA] Length = 371 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G V K+ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGRVEVPDARLDKLTELIKPQKKVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 112 >gi|227499159|ref|ZP_03929294.1| GTP-binding protein ychF [Acidaminococcus sp. D21] gi|226904606|gb|EEH90524.1| GTP-binding protein ychF [Acidaminococcus sp. D21] Length = 369 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 61/106 (57%), Gaps = 17/106 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGY--KEF 208 ++GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV + Y K Sbjct: 7 EMGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGIVDVPDPRLQVLSDLYHSKRI 66 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + A DI G++K A +G G+G++FL H +T + +V E+ Sbjct: 67 VPAGMKFVDIAGLVKGASKGEGLGNKFLSHIRQTDAIAEVVRCFED 112 >gi|78777320|ref|YP_393635.1| translation-associated GTPase [Sulfurimonas denitrificans DSM 1251] gi|78497860|gb|ABB44400.1| GTP-binding protein, HSR1-related [Sulfurimonas denitrificans DSM 1251] Length = 366 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-----------------KE 203 IG++GLPN GKST ++T+A+ + A+YPF T+ PN +V + Sbjct: 5 IGLVGLPNVGKSTTFNALTKAQNAEAANYPFCTIEPNKAVVPVPDSRLQALAKIVNPERI 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y DI G++K A +G G+G++FL + T V+LHIV E++ Sbjct: 65 QYSTLDFVDIAGLVKGASKGEGLGNKFLSNIRETEVILHIVRCFEDD 111 >gi|86133344|ref|ZP_01051926.1| GTP-dependent nucleic acid-binding protein [Polaribacter sp. MED152] gi|85820207|gb|EAQ41354.1| GTP-dependent nucleic acid-binding protein [Polaribacter sp. MED152] Length = 363 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG+V E +E + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNLGVVNVPDTRIEKLEELVNPEKVVP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T +LH++ + + Sbjct: 64 ATVEIVDIAGLVKGASKGEGLGNQFLANIRETDAILHVLRCFDND 108 >gi|89897783|ref|YP_521270.1| translation-associated GTPase [Desulfitobacterium hafniense Y51] gi|219670932|ref|YP_002461367.1| GTP-dependent nucleic acid-binding protein EngD [Desulfitobacterium hafniense DCB-2] gi|89337231|dbj|BAE86826.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219541192|gb|ACL22931.1| GTP-binding protein YchF [Desulfitobacterium hafniense DCB-2] Length = 366 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ + E + Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAEAANYPFCTIDPNVGMVQVPDARLQVLAEMVHPDKIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL H ++H+V E++ Sbjct: 66 ATVEFVDIAGLVKGASKGEGLGNKFLSHIREVDAVVHVVRCFEDS 110 >gi|149173934|ref|ZP_01852563.1| probable GTP-binding protein [Planctomyces maris DSM 8797] gi|148847464|gb|EDL61798.1| probable GTP-binding protein [Planctomyces maris DSM 8797] Length = 363 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T A +YPF T+ PN+GIV E ++I Sbjct: 4 GIVGLPNVGKSTLFNALTAAGIASENYPFCTIEPNVGIVNVPDPRLEMIHKYIPTDKVIP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 L DI GI+K A +G G+G++FL H +LH+V E Sbjct: 64 AILRLVDIAGIVKGASEGEGLGNKFLSHIRNVDAILHVVRCFE 106 >gi|171186066|ref|YP_001794985.1| translation-associated GTPase [Thermoproteus neutrophilus V24Sta] gi|170935278|gb|ACB40539.1| GTPase of unknown function domain protein [Thermoproteus neutrophilus V24Sta] Length = 401 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 23/108 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------------------- 200 IG++G PNAGKSTF A+ T KI+ PFTT+ PN+GI Sbjct: 9 IGVVGKPNAGKSTFFAAATLKDVKISPTPFTTIDPNIGIGYVRIDGCPCSEIKCSPRTYA 68 Query: 201 VKEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 V +G + L D+ G++ A QG G+G++FL H R VL+H+V A Sbjct: 69 VVDGVCFAPVELIDVAGLVPGAWQGRGLGNQFLDHLRRAPVLIHVVDA 116 >gi|304317215|ref|YP_003852360.1| GTP-binding protein YchF [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778717|gb|ADL69276.1| GTP-binding protein YchF [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 363 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILA-------- 211 +IGI+GLPN GKST ++T+A + A+YPF T+ PN+GIV + + LA Sbjct: 2 EIGIVGLPNVGKSTIFNAITQAGAECANYPFCTIEPNVGIVSVPDNRLYELAKIVNPQKI 61 Query: 212 --------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL H +L++V E++ Sbjct: 62 IPATIKFVDIAGLVKGASKGEGLGNKFLSHIREVDAILNVVRCFEDS 108 >gi|154498964|ref|ZP_02037342.1| hypothetical protein BACCAP_02956 [Bacteroides capillosus ATCC 29799] gi|150271804|gb|EDM99030.1| hypothetical protein BACCAP_02956 [Bacteroides capillosus ATCC 29799] Length = 369 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 22/111 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 +GI+GLPN GKST ++T A + A+YPF T+ PN+G+V E Y+ Sbjct: 3 LGIVGLPNVGKSTLFNAITNAGAESANYPFCTIDPNVGVVAVPDSRLDWLSEFYQPKKTT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQ 252 EF+ DI G++K A QG G+G++FL + ++H+V +EN+ Sbjct: 63 PAVVEFV--DIAGLVKGASQGQGLGNKFLANIRECDAIVHVVRCFDDENIM 111 >gi|323706133|ref|ZP_08117702.1| GTP-binding protein YchF [Thermoanaerobacterium xylanolyticum LX-11] gi|323534577|gb|EGB24359.1| GTP-binding protein YchF [Thermoanaerobacterium xylanolyticum LX-11] Length = 363 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF------------ 208 +IGI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 2 EIGIVGLPNVGKSTIFNAITQAGAECANYPFCTIEPNVGIVSVPDKRLNELANIVNPQKI 61 Query: 209 -----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL H +L++V +++ Sbjct: 62 IPATIKFVDIAGLVKGASKGEGLGNKFLSHIREVDAILNVVRCFDDS 108 >gi|312899006|ref|ZP_07758393.1| GTP-binding protein YchF [Megasphaera micronuciformis F0359] gi|310619913|gb|EFQ03486.1| GTP-binding protein YchF [Megasphaera micronuciformis F0359] Length = 369 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 20/129 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFIL---------- 210 ++GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ K + Sbjct: 7 EVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVEVPDKRISVLTDMYHPKSV 66 Query: 211 -------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 DI G++ A +G G+G++FL H T + +V E EN+ + L Sbjct: 67 VPAVMRFVDIAGLVAGASKGEGLGNKFLSHIRETDAIAEVVRCFEDENITHVSGSVDPLR 126 Query: 261 ELSAYNSEL 269 ++ N+EL Sbjct: 127 DIDIINTEL 135 >gi|309800327|ref|ZP_07694498.1| Spo0B-associated GTP-binding protein [Streptococcus infantis SK1302] gi|308116051|gb|EFO53556.1| Spo0B-associated GTP-binding protein [Streptococcus infantis SK1302] Length = 109 Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 46/87 (52%), Positives = 60/87 (68%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD AK+ +++G+GG G ++FRREK++ GGP GG GGRGG+V L TL+DFRY Sbjct: 4 FLDTAKIKVKAGNGGDGMVAFRREKYVPNGGPWGGDGGRGGNVVFVVDEGLRTLMDFRYN 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLT 89 +HFKAQ GEKGM + G ED L+ Sbjct: 64 RHFKAQSGEKGMTKGMHGRGAEDFDLS 90 >gi|260585088|ref|ZP_05852829.1| GTP-binding protein YchF [Granulicatella elegans ATCC 700633] gi|260157176|gb|EEW92251.1| GTP-binding protein YchF [Granulicatella elegans ATCC 700633] Length = 366 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGVEAANYPFATIDPNVGVVEVPDERLQKLTELVKPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 F DI GI+K A +G G+G++FL H + + +V E EN+ Sbjct: 66 TTFEFTDIAGIVKGASRGEGLGNKFLSHIRQVDAICQVVRCFEDENI 112 >gi|212640667|ref|YP_002317187.1| GTP-dependent nucleic acid-binding protein EngD [Anoxybacillus flavithermus WK1] gi|212562147|gb|ACJ35202.1| Predicted GTPase, probable translation factor [Anoxybacillus flavithermus WK1] Length = 366 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK---EGYKE------------ 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGIVEVPDERLKTLTELFNPKRTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL H + + +V +EN+ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFADENI 112 >gi|83319819|ref|YP_424753.1| GTP-dependent nucleic acid-binding protein EngD [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283705|gb|ABC01637.1| GTP-dependent nucleic acid-binding protein engD [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 364 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------EGYKEFI----- 209 +GI+GLPN GKST ++T +K + A+YPF T+ PN+GIV+ E YK F Sbjct: 5 VGIVGLPNVGKSTLFNAITNSKVEAANYPFATIEPNVGIVEVPDYRLDELYKIFNSKKRV 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+I A QG G+G+ FL + +T + +V ++ Sbjct: 65 ATTIEFVDIAGLIAGASQGEGLGNAFLANIRQTDAICQVVRCFDD 109 >gi|154505933|ref|ZP_02042671.1| hypothetical protein RUMGNA_03475 [Ruminococcus gnavus ATCC 29149] gi|153793951|gb|EDN76371.1| hypothetical protein RUMGNA_03475 [Ruminococcus gnavus ATCC 29149] Length = 365 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V E Y Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVTVPDHRLDVLGEMYNTKKIT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E++ Sbjct: 63 PAAIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDS 108 >gi|239905141|ref|YP_002951880.1| putative GTP-binding protein [Desulfovibrio magneticus RS-1] gi|239795005|dbj|BAH73994.1| putative GTP-binding protein [Desulfovibrio magneticus RS-1] Length = 369 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN+ IV E + Sbjct: 5 VGIVGLPNVGKSTLFNALTKAQNAQAANYPFCTIEPNVAIVPVPDPRLTALAELVRPQQV 64 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL H T V++H+ A E++ Sbjct: 65 LPATVRFTDIAGLVAGASKGEGLGNKFLAHIRETEVIIHVARAFEDD 111 >gi|259047764|ref|ZP_05738165.1| GTP-dependent nucleic acid-binding protein EngD [Granulicatella adiacens ATCC 49175] gi|259035955|gb|EEW37210.1| GTP-dependent nucleic acid-binding protein EngD [Granulicatella adiacens ATCC 49175] Length = 366 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGVEAANYPFATIDPNVGVVEVPDLRLQKLTELVKPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 F DI GI+K A +G G+G++FL H + + +V E EN+ Sbjct: 66 TTFEFTDIAGIVKGASRGEGLGNKFLSHIRQVDAICQVVRCFEDENI 112 >gi|261420892|ref|YP_003254574.1| GTP-dependent nucleic acid-binding protein EngD [Geobacillus sp. Y412MC61] gi|319768563|ref|YP_004134064.1| GTP-binding protein YchF [Geobacillus sp. Y412MC52] gi|261377349|gb|ACX80092.1| GTP-binding protein YchF [Geobacillus sp. Y412MC61] gi|317113429|gb|ADU95921.1| GTP-binding protein YchF [Geobacillus sp. Y412MC52] Length = 366 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKE----- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ E ++ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVEVPDERLDVLTEMFRPKRTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL H + + +V +EN+ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFSDENI 112 >gi|297531677|ref|YP_003672952.1| GTP-binding protein YchF [Geobacillus sp. C56-T3] gi|297254929|gb|ADI28375.1| GTP-binding protein YchF [Geobacillus sp. C56-T3] Length = 366 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKE----- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ E ++ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVEVPDERLDVLTEMFRPKRTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL H + + +V +EN+ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFSDENI 112 >gi|317496036|ref|ZP_07954397.1| GTP-binding protein YchF [Gemella moribillum M424] gi|316913842|gb|EFV35327.1| GTP-binding protein YchF [Gemella moribillum M424] Length = 366 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDHRLNKLTELVEPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 F DI GI+K A +G G+G++FL H + +V E EN+ Sbjct: 66 TSFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRCFEDENI 112 >gi|310792406|gb|EFQ27933.1| TGS domain-containing protein [Glomerella graminicola M1.001] Length = 371 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 37/95 (38%), Positives = 59/95 (62%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ VTR K ++A Y FTTL G+++ G E L D+PGII+ Sbjct: 65 ARIALVGFPSVGKSTFLSKVTRTKSEVASYAFTTLTAIPGVLEYGGAEIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A ++ Q A Sbjct: 125 ASEGKGRGRQVISAAKTSDLILMVLDATKKAEQRA 159 >gi|253999720|ref|YP_003051783.1| GTP-dependent nucleic acid-binding protein EngD [Methylovorus sp. SIP3-4] gi|313201768|ref|YP_004040426.1| GTP-binding protein ychf [Methylovorus sp. MP688] gi|253986399|gb|ACT51256.1| GTP-binding protein YchF [Methylovorus sp. SIP3-4] gi|312441084|gb|ADQ85190.1| GTP-binding protein YchF [Methylovorus sp. MP688] Length = 361 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 32/152 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VKE 203 GI+GLPN GKST ++TRA +YPF T+ PN+GI V+ Sbjct: 4 GIVGLPNVGKSTLFNAITRAGIAAENYPFCTIEPNVGIVEVPDPRLKPLIDIVNPQKVQP 63 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-NV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V ++ NV A LD Sbjct: 64 AIVEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFDDGNVVHVAGKVDPLD 121 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 ++ N+EL LS ++TV+ TL R+ Sbjct: 122 DIETINTEL-------ALSDMETVEK-TLQRE 145 >gi|210617177|ref|ZP_03291444.1| hypothetical protein CLONEX_03666 [Clostridium nexile DSM 1787] gi|210149452|gb|EEA80461.1| hypothetical protein CLONEX_03666 [Clostridium nexile DSM 1787] Length = 365 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V E Y Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVTVPDERLNVLGEMYHTKKIV 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E++ Sbjct: 63 PAAIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDS 108 >gi|329769232|ref|ZP_08260651.1| GTP-dependent nucleic acid-binding protein engD [Gemella sanguinis M325] gi|328839363|gb|EGF88943.1| GTP-dependent nucleic acid-binding protein engD [Gemella sanguinis M325] Length = 366 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDHRLNKLTELVEPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 F DI GI+K A +G G+G++FL H + +V E EN+ Sbjct: 66 TSFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRCFEDENI 112 >gi|326335007|ref|ZP_08201207.1| GTP-dependent nucleic acid-binding protein EngD [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692812|gb|EGD34751.1| GTP-dependent nucleic acid-binding protein EngD [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 363 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG+V E +E + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNLGVVNVPDARLEKLEELVSPERVQP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + H ++H++ + + Sbjct: 64 ATVEIVDIAGLVKGASEGEGLGNQFLGNIRECHAIIHVLRCFDND 108 >gi|262341163|ref|YP_003284018.1| GTP-binding protein [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272500|gb|ACY40408.1| GTP-binding protein [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 338 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GIIGLPN GKSTF ++ +K ++PF T+ PN G+ K KE I Sbjct: 4 GIIGLPNTGKSTFFNFISNSKVLSENFPFCTIEPNYGMTKVPDQRLYELKEIIQPMKIIP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+IK +H+G G+G++FL H T+V++H++ + Sbjct: 64 SEIKIVDIAGLIKGSHKGDGLGNKFLSHIRETNVIIHMIRLFHD 107 >gi|241888611|ref|ZP_04775918.1| GTP-binding protein YchF [Gemella haemolysans ATCC 10379] gi|241864634|gb|EER69009.1| GTP-binding protein YchF [Gemella haemolysans ATCC 10379] Length = 366 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPEHRLNKLTELVEPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 F DI GI+K A +G G+G++FL H + +V E EN+ Sbjct: 66 TSFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRCFEDENI 112 >gi|329768073|ref|ZP_08259583.1| GTP-dependent nucleic acid-binding protein engD [Gemella haemolysans M341] gi|328838341|gb|EGF87951.1| GTP-dependent nucleic acid-binding protein engD [Gemella haemolysans M341] Length = 366 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDHRLNKLTELVEPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 F DI GI+K A +G G+G++FL H + +V E EN+ Sbjct: 66 TSFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRCFEDENI 112 >gi|197119138|ref|YP_002139565.1| GTP-dependent nucleic acid-binding protein EngD [Geobacter bemidjiensis Bem] gi|197088498|gb|ACH39769.1| GTP-dependent translational factor YchF, putative [Geobacter bemidjiensis Bem] Length = 364 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 18/109 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T A + A+YPF T+ PN+GIV + E + Sbjct: 4 NCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVAVPDPRMDRLAEIVHPERM 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 DI G++K A QG G+G++FL H +LH+V + ENV Sbjct: 64 QPTTIEFLDIAGLVKGASQGEGLGNKFLGHIRSVDAILHVVRCFDNENV 112 >gi|42525821|ref|NP_970919.1| GTP-dependent nucleic acid-binding protein EngD [Treponema denticola ATCC 35405] gi|41815871|gb|AAS10800.1| GTP-binding protein YchF [Treponema denticola ATCC 35405] gi|325475503|gb|EGC78684.1| GTP-binding protein YchF [Treponema denticola F0402] Length = 368 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 21/109 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST +++T A + A+YPF T+ PN+GIV Sbjct: 4 NCGIVGLPNVGKSTIFSALTSAPAEAANYPFCTINPNVGIVSLPDARLKKLAEHFNPKKV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL H V+ H+V + + Sbjct: 64 IPATVEFV--DIAGLVKGASKGEGLGNQFLSHIREVGVIAHVVRCFDND 110 >gi|56422018|ref|YP_149336.1| GTP-dependent nucleic acid-binding protein EngD [Geobacillus kaustophilus HTA426] gi|56381860|dbj|BAD77768.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 366 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKE----- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ E ++ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVEVPDERLDVLTEMFRPKRTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL H + + +V +EN+ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFSDENI 112 >gi|331091577|ref|ZP_08340413.1| GTP-binding protein YchF [Lachnospiraceae bacterium 2_1_46FAA] gi|330403604|gb|EGG83160.1| GTP-binding protein YchF [Lachnospiraceae bacterium 2_1_46FAA] Length = 365 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V E Y Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVTVPDKRLDVLGEMYHTKKIV 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E++ Sbjct: 63 PAAIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDS 108 >gi|327400323|ref|YP_004341162.1| GTPase [Archaeoglobus veneficus SNP6] gi|327315831|gb|AEA46447.1| GTPase of unknown function domain protein [Archaeoglobus veneficus SNP6] Length = 388 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 20/108 (18%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK---------------- 202 + +IGI G PNAGKSTF + T A +IA+YPFTT+ PN+G+ Sbjct: 1 MIEIGIAGKPNAGKSTFFKAATLADVEIANYPFTTIEPNVGVAHVRVECVCQELGVKCDN 60 Query: 203 --EGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 +G++ L D+ G++ AH+G G+G+ FL + ++ ++H++ A Sbjct: 61 CIDGWRLIPVKLIDVAGLVPEAHKGRGLGNEFLDNLRQSEAVIHVIDA 108 >gi|332297418|ref|YP_004439340.1| GTP-binding protein YchF [Treponema brennaborense DSM 12168] gi|332180521|gb|AEE16209.1| GTP-binding protein YchF [Treponema brennaborense DSM 12168] Length = 369 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFI--------- 209 + GI+GLPN GKST +++T A + A+YPF T+ PN+GIV + +F+ Sbjct: 4 NCGIVGLPNVGKSTIFSALTSAPAEAANYPFCTINPNVGIVDLPDARLDFLAKTFETKRK 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 DI G++K A +G G+G++FL H V+ H+V + Sbjct: 64 VPATVEFVDIAGLVKGASKGEGLGNQFLAHIREVGVIAHVVRCFD 108 >gi|253700100|ref|YP_003021289.1| GTP-dependent nucleic acid-binding protein EngD [Geobacter sp. M21] gi|251774950|gb|ACT17531.1| GTP-binding protein YchF [Geobacter sp. M21] Length = 364 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 18/109 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T A + A+YPF T+ PN+GIV + E + Sbjct: 4 NCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVAVPDPRMDRLAEIVHPERM 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 DI G++K A QG G+G++FL H +LH+V + ENV Sbjct: 64 QPTTIEFLDIAGLVKGASQGEGLGNKFLGHIRSVDAILHVVRCFDNENV 112 >gi|313665697|ref|YP_004047568.1| GTP-binding protein YchF [Mycoplasma leachii PG50] gi|312949789|gb|ADR24385.1| GTP-binding protein YchF [Mycoplasma leachii PG50] Length = 364 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------EGYKEFI----- 209 +GI+GLPN GKST ++T++K + A+YPF T+ PN+GIV+ E +K F Sbjct: 5 VGIVGLPNVGKSTLFNAITKSKAEAANYPFATIEPNVGIVEVPDYRLDELFKIFNSKKRV 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+I A QG G+G+ FL + +T + ++ ++ Sbjct: 65 ATTIEFVDIAGLIAGASQGEGLGNAFLANIRQTDAICQVIRCFDD 109 >gi|88802800|ref|ZP_01118327.1| GTP-binding protein [Polaribacter irgensii 23-P] gi|88781658|gb|EAR12836.1| GTP-binding protein [Polaribacter irgensii 23-P] Length = 363 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G+V E +E + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNIGVVNVPDKRIEKLEELVKPERVMP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T +LH++ + + Sbjct: 64 ATVEIVDIAGLVKGASKGEGLGNQFLANIRETDAILHVIRCFDND 108 >gi|325261907|ref|ZP_08128645.1| GTP-binding protein YchF [Clostridium sp. D5] gi|324033361|gb|EGB94638.1| GTP-binding protein YchF [Clostridium sp. D5] Length = 365 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V E Y Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVTVPDKRLDVLGEMYHTKKIV 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E++ Sbjct: 63 PAAIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDS 108 >gi|302393059|ref|YP_003828879.1| GTP-binding protein YchF [Acetohalobium arabaticum DSM 5501] gi|302205136|gb|ADL13814.1| GTP-binding protein YchF [Acetohalobium arabaticum DSM 5501] Length = 365 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T +YPF T+ PN+GIVK E E I Sbjct: 6 GIVGLPNVGKSTLFNAITEVGAGAENYPFCTIDPNMGIVKVPDKRLEVLTEIINPQETTP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A G G+G++FL H ++H+V E++ Sbjct: 66 TAIEFVDIAGLVKGASDGEGLGNKFLSHIREVDAIIHVVRCFEDS 110 >gi|225028102|ref|ZP_03717294.1| hypothetical protein EUBHAL_02372 [Eubacterium hallii DSM 3353] gi|224954572|gb|EEG35781.1| hypothetical protein EUBHAL_02372 [Eubacterium hallii DSM 3353] Length = 365 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 +GI+GLPN GKST S+T+A + A+YPF T+ PN+GIV + Y Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNIGIVAVPDQRLKVLSDMYDSAKIV 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 63 PATIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDT 108 >gi|119510992|ref|ZP_01630113.1| hypothetical protein N9414_04185 [Nodularia spumigena CCY9414] gi|119464337|gb|EAW45253.1| hypothetical protein N9414_04185 [Nodularia spumigena CCY9414] Length = 363 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 22/106 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST F A V AK + A++PF T+ PN+GIV Sbjct: 5 GIVGLPNVGKSTLFNAVVANAKAEAANFPFCTIEPNVGIVSVPDERLNVLANIASSVQTI 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 EF+ DI G++K A QG G+G++FL H ++H+V E Sbjct: 65 PARVEFV--DIAGLVKGASQGEGLGNQFLSHIREVDAIIHVVRCFE 108 >gi|47459437|ref|YP_016299.1| translation-associated GTPase [Mycoplasma mobile 163K] gi|47458767|gb|AAT28088.1| putative GTPase translation factor [Mycoplasma mobile 163K] Length = 366 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 33/195 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKS+ +++T ++A+YPFTT+ PN+ +V K + Sbjct: 6 GIVGLPNVGKSSLFSALTNLHIEMANYPFTTIEPNISVVEVKDKRLDVLANIVKPKKIVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 F DI G++ A +G G+G++FL + + +++H+V E+ LD + Sbjct: 66 ATFEFVDIAGLVAGASKGEGLGNQFLANIKEVDLIVHVVRCFEDKNIIHVANSLDPI--- 122 Query: 266 NSELRKKIEIVGLSQI--DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE--- 320 + +EI+ L I D + + ++ + A G +F IT + + LE Sbjct: 123 -----RDLEIINLELILADLQSVEKIIQRIQKRALNTGDAALKFEYITLLRVKESLEKSL 177 Query: 321 CLHDKIFSIRGENEF 335 L D FS ENE Sbjct: 178 SLRDIDFS---ENEL 189 >gi|328948964|ref|YP_004366301.1| GTP-binding protein YchF [Treponema succinifaciens DSM 2489] gi|328449288|gb|AEB15004.1| GTP-binding protein YchF [Treponema succinifaciens DSM 2489] Length = 376 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 22/155 (14%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFI----------- 209 GI+GLPN GKST +++T+A + A+YPF T+ PN+GIV + +F+ Sbjct: 6 GIVGLPNVGKSTIFSALTKAPAEAANYPFCTIDPNIGIVDLPDERLDFMASVFQPKKKIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 DI G+IK A G G+G++FL + T V+ H+V + Q + D+ + Sbjct: 66 ATVDFVDIAGLIKGASSGEGLGNKFLANIRETAVIAHVVRCFD---NPDIQHVRDD-AKT 121 Query: 266 NSELRKKIEIVGLS-QIDTVDSDTLARKKNELATQ 299 + + + +I+ + ++ D DT+A++ ++ Q Sbjct: 122 EAPVDPESDILTIDFELAQADLDTIAKRAEKITKQ 156 >gi|282901754|ref|ZP_06309669.1| GTP-binding protein, HSR1-related [Cylindrospermopsis raciborskii CS-505] gi|281193371|gb|EFA68353.1| GTP-binding protein, HSR1-related [Cylindrospermopsis raciborskii CS-505] Length = 400 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 47/136 (34%), Positives = 71/136 (52%), Gaps = 20/136 (14%) Query: 133 STNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKST-FLASVTRAKPKIADYPF 191 S+ +A P ++G +I K ++ GI+GLPN GKST F A V AK + A++PF Sbjct: 14 SSQEAKILQLP-VVGIFTLIIYKFTML-KAGIVGLPNVGKSTLFNAVVANAKAEAANFPF 71 Query: 192 TTLYPNLGIV-----------KEGYKEFIL------ADIPGIIKNAHQGAGIGDRFLKHT 234 T+ PN+G+V K E I+ DI G++K A QG G+G++FL H Sbjct: 72 CTIEPNVGVVAVPDDRLNVLAKLASSEQIIPARVEFVDIAGLVKGASQGEGLGNQFLSHI 131 Query: 235 ERTHVLLHIVSALEEN 250 ++H+V E + Sbjct: 132 REVDAIVHVVRCFEND 147 >gi|167765838|ref|ZP_02437891.1| hypothetical protein CLOSS21_00329 [Clostridium sp. SS2/1] gi|317496844|ref|ZP_07955174.1| GTP-binding protein YchF [Lachnospiraceae bacterium 5_1_63FAA] gi|167712555|gb|EDS23134.1| hypothetical protein CLOSS21_00329 [Clostridium sp. SS2/1] gi|291559194|emb|CBL37994.1| GTP-binding protein YchF [butyrate-producing bacterium SSC/2] gi|316895856|gb|EFV18008.1| GTP-binding protein YchF [Lachnospiraceae bacterium 5_1_63FAA] Length = 363 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY--KEFI 209 +GI+GLPN GKST S+T+A + A+YPF T+ PN+GIV E Y K+ I Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGIVTVPDARVDYLAEKYHSKKVI 62 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI G++K A +G G+G++FL + ++H+V ++ Sbjct: 63 PAAIEFVDIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFDD 107 >gi|331086027|ref|ZP_08335110.1| GTP-binding protein YchF [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406950|gb|EGG86455.1| GTP-binding protein YchF [Lachnospiraceae bacterium 9_1_43BFAA] Length = 365 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 22/110 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V E Y Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVAVPDERLEVLGEMYHTKKIV 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++K A +G G+G++FL + ++H+V E EN+ Sbjct: 63 PATIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDENI 110 >gi|313112956|ref|ZP_07798600.1| GTP-binding protein YchF [Faecalibacterium cf. prausnitzii KLE1255] gi|310624721|gb|EFQ08032.1| GTP-binding protein YchF [Faecalibacterium cf. prausnitzii KLE1255] Length = 377 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYK-------------- 206 +GI+GLPN GKST ++T K + A+YPF T+ PN GIV K Sbjct: 3 LGIVGLPNVGKSTLFNAITSTKNAEAANYPFCTIEPNSGIVAVPDKRLDKLAEIWQTNKK 62 Query: 207 -----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QGAG+G++FL H ++H+V +++ Sbjct: 63 TPAIVEFV--DIAGLVKGASQGAGLGNKFLGHIRECDAIVHVVRCFDDD 109 >gi|229917469|ref|YP_002886115.1| GTP-binding protein YchF [Exiguobacterium sp. AT1b] gi|229468898|gb|ACQ70670.1| GTP-binding protein YchF [Exiguobacterium sp. AT1b] Length = 366 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 24/140 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGVEAANYPFATIDPNVGVVEVPDARLDRLTELVKPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQ--AAYQCILDEL 262 F DI GI+K A +G G+G++FL + + +V E EN+ A +D++ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLANIREVDAICQVVRCFEDENITHVAGRVSPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQID 282 + N EL + L Q+D Sbjct: 126 TTINLELI----LADLEQVD 141 >gi|329122121|ref|ZP_08250729.1| GTP-dependent nucleic acid-binding protein EngD [Dialister micraerophilus DSM 19965] gi|327466928|gb|EGF12444.1| GTP-dependent nucleic acid-binding protein EngD [Dialister micraerophilus DSM 19965] Length = 368 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 31/154 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++T+A + A++PF T+ PN+G+V+ Sbjct: 7 IGIVGLPNVGKSTLFNAITKAGAEAANFPFCTIEPNVGVVEVPDERIYKLAKLFNPKKLT 66 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-- 260 + F+ DI G++ A +G G+G++FL H T + H+V ++ + +D Sbjct: 67 PAFTRFV--DIAGLVAGASKGEGLGNQFLSHIRETDAIAHVVRCFADSNITHVEGTIDPV 124 Query: 261 -ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++ N+EL L+ +DTV + +K Sbjct: 125 RDMGIINTEL-------CLADLDTVSKRKIKAEK 151 >gi|313891626|ref|ZP_07825233.1| GTP-binding protein YchF [Dialister microaerophilus UPII 345-E] gi|313119904|gb|EFR43089.1| GTP-binding protein YchF [Dialister microaerophilus UPII 345-E] Length = 368 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 31/154 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++T+A + A++PF T+ PN+G+V+ Sbjct: 7 IGIVGLPNVGKSTLFNAITKAGAEAANFPFCTIEPNVGVVEVPDERIYKLAKLFNPKKLT 66 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-- 260 + F+ DI G++ A +G G+G++FL H T + H+V ++ + +D Sbjct: 67 PAFTRFV--DIAGLVAGASKGEGLGNQFLSHIRETDAIAHVVRCFADSNITHVEGTIDPV 124 Query: 261 -ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++ N+EL L+ +DTV + +K Sbjct: 125 RDMGIINTEL-------CLADLDTVSKRKIKAEK 151 >gi|284039134|ref|YP_003389064.1| GTP-binding protein YchF [Spirosoma linguale DSM 74] gi|283818427|gb|ADB40265.1| GTP-binding protein YchF [Spirosoma linguale DSM 74] Length = 366 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST +++ K + A+YPF T+ PN+G+V Sbjct: 6 GIVGLPNVGKSTLFNAISSGKAEAANYPFCTIEPNVGVVTVPDERLDTLESLVKPQRVVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QGAG+G++FL + ++H++ E++ Sbjct: 66 TIIEFV--DIAGLVKGASQGAGLGNKFLANIREVDAIVHVIRCFEDD 110 >gi|325662235|ref|ZP_08150850.1| GTP-binding protein YchF [Lachnospiraceae bacterium 4_1_37FAA] gi|325471487|gb|EGC74708.1| GTP-binding protein YchF [Lachnospiraceae bacterium 4_1_37FAA] Length = 365 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 22/110 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V E Y Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVAVPDERLEVLGEMYHTKKIV 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++K A +G G+G++FL + ++H+V E EN+ Sbjct: 63 PATIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDENI 110 >gi|319891317|ref|YP_004148192.1| GTP-binding and nucleic acid-binding protein YchF [Staphylococcus pseudintermedius HKU10-03] gi|317161013|gb|ADV04556.1| GTP-binding and nucleic acid-binding protein YchF [Staphylococcus pseudintermedius HKU10-03] gi|323465529|gb|ADX77682.1| GTP-binding protein [Staphylococcus pseudintermedius ED99] Length = 365 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDTRLTQLEAIVNPKRTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL H + +V A +ENV Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDENV 112 >gi|228472656|ref|ZP_04057416.1| GTP-binding protein YchF [Capnocytophaga gingivalis ATCC 33624] gi|228276069|gb|EEK14825.1| GTP-binding protein YchF [Capnocytophaga gingivalis ATCC 33624] Length = 363 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG+V E +E + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNLGVVNVPDARLEKLEELVHPERVQP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + H ++H++ + + Sbjct: 64 ATVEIVDIAGLVKGASKGEGLGNQFLGNIRECHAIIHVLRCFDND 108 >gi|225569225|ref|ZP_03778250.1| hypothetical protein CLOHYLEM_05307 [Clostridium hylemonae DSM 15053] gi|225162024|gb|EEG74643.1| hypothetical protein CLOHYLEM_05307 [Clostridium hylemonae DSM 15053] Length = 366 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY--KEFI 209 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V E Y K+ I Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVTVPDERLNVLGEMYHTKKII 62 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 63 PAAIEFVDIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFED 107 >gi|224542226|ref|ZP_03682765.1| hypothetical protein CATMIT_01401 [Catenibacterium mitsuokai DSM 15897] gi|224524861|gb|EEF93966.1| hypothetical protein CATMIT_01401 [Catenibacterium mitsuokai DSM 15897] Length = 366 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T A+ + A+YPF T+ PN+G+V K Y Sbjct: 6 GIVGLPNVGKSTLFNAITNAQVEAANYPFATIDPNVGVVEVPDHRLDDLAAIFNPKKTIY 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F DI G++K A +G G+G++FL + T + +V + Sbjct: 66 TTFEFTDIAGLVKGASRGEGLGNKFLANIRETDAICEVVRCFRD 109 >gi|260655680|ref|ZP_05861153.1| GTP-binding protein YchF [Jonquetella anthropi E3_33 E1] gi|260629597|gb|EEX47791.1| GTP-binding protein YchF [Jonquetella anthropi E3_33 E1] Length = 362 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 +GI+GLPN GKST ++T+A + ++YPF T+ PN+G+V + +LA Sbjct: 3 LGIVGLPNVGKSTIFNAITQAGAEASNYPFCTIEPNVGMVAVPDERLDVLARMYESKKIT 62 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL H + + H+V E++ Sbjct: 63 PATVQFFDIAGLVKGASKGEGLGNQFLSHIREVNAICHVVRCFEDS 108 >gi|222100307|ref|YP_002534875.1| GTP-binding protein YchF [Thermotoga neapolitana DSM 4359] gi|221572697|gb|ACM23509.1| GTP-binding protein YchF [Thermotoga neapolitana DSM 4359] Length = 360 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 18/115 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------------KEGYKEFI 209 +GI+GLPNAGKS+F +T +PF T+ PN+G++ EG K+ + Sbjct: 4 VGIVGLPNAGKSSFFNFLTDNDVPAESFPFCTIEPNVGVLVVPDERVKILAKNEGSKKVV 63 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI 258 + DI G++K A +G G+G++FL H + V+ H+V E + V YQ + Sbjct: 64 HPFVEIVDIAGLVKGASKGEGLGNQFLDHISKVDVIAHVVRVFESKTVSHPYQSV 118 >gi|196249876|ref|ZP_03148572.1| GTP-binding protein YchF [Geobacillus sp. G11MC16] gi|196210752|gb|EDY05515.1| GTP-binding protein YchF [Geobacillus sp. G11MC16] Length = 366 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKE----- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ E ++ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVEVPDERLNVLMEMFQPKRTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL H + + +V +EN+ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFNDENI 112 >gi|138897057|ref|YP_001127510.1| GTP-dependent nucleic acid-binding protein EngD [Geobacillus thermodenitrificans NG80-2] gi|134268570|gb|ABO68765.1| GTP-binding protein YchF [Geobacillus thermodenitrificans NG80-2] Length = 366 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKE----- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ E ++ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGVVEVPDERLNVLMEMFQPKRTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL H + + +V +EN+ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFNDENI 112 >gi|167759077|ref|ZP_02431204.1| hypothetical protein CLOSCI_01424 [Clostridium scindens ATCC 35704] gi|167663195|gb|EDS07325.1| hypothetical protein CLOSCI_01424 [Clostridium scindens ATCC 35704] Length = 366 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY--KEFI 209 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V E Y K+ I Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVTVPDERLNVLGEMYHTKKII 62 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 63 PAAIEFVDIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFED 107 >gi|156088443|ref|XP_001611628.1| GTP1/OBG family protein [Babesia bovis] gi|154798882|gb|EDO08060.1| GTP1/OBG family protein [Babesia bovis] Length = 384 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 77/300 (25%), Positives = 148/300 (49%), Gaps = 34/300 (11%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +V ++G GGA + R + + G GG GG++ ++ T + +L+ Sbjct: 32 FVDYLRVKCKAGHGGAPVANVNRSRRL----CGPGYGGHGGNIVLRPTHLVESLLHI--D 85 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGT----QVFEEDGISLIC--DLDQEGQRII 116 KA +G M +R G + + VP+G +V E+G + + + ++ Sbjct: 86 DIVKANNGGDAMGTSR-GKHAKHCAIHVPLGVIVRKRVKTEEGYRNVFWHQFLNQDRDLL 144 Query: 117 LAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFL 176 +A GG GG G + FK ++ P +G+ I L+L+LI D+ IG PN GK++ + Sbjct: 145 VARGGRGGLGPSCFKKHDHRLPE------IGETTNIELELRLINDVAFIGEPNVGKTSLI 198 Query: 177 ASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 +++T +I +T P++ +++ +G + L D+P I K G + +R ++H Sbjct: 199 SALTTYMTRIGPEEGSTTRPHIAVMRFVDGL-DIRLMDLPPICKE--NGIPL-NRIMRHI 254 Query: 235 ERTHVLLHIVSAL-EENVQAAYQ----CILDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 R+ ++ ++V+A+ +EN+ + CI YNS K+E+V +++ D + L Sbjct: 255 YRSKIIAYVVTAVGDENIYCTLERLRNCIRKS-PMYNSN---KLELVIVNKCDMIHKHAL 310 >gi|301168558|emb|CBW28148.1| conserved hypothetical protein [Bacteriovorax marinus SJ] Length = 369 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 17/106 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T A + A+YPF T+ PN+GIV E I Sbjct: 4 NCGIVGLPNVGKSTIFQALTSAPAEAANYPFCTIEPNVGIVNVADWRLEKITTLIKPSKT 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++K A +G G+G++FL H + + ++H+V ++ Sbjct: 64 IPTIVEFVDIAGLVKGASKGEGLGNQFLGHIRQVNAIIHVVRCFDD 109 >gi|295104467|emb|CBL02011.1| GTP-binding protein YchF [Faecalibacterium prausnitzii SL3/3] Length = 377 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYK-------------- 206 +GI+GLPN GKST ++T K + A+YPF T+ PN GIV K Sbjct: 3 LGIVGLPNVGKSTLFNAITSTKNAEAANYPFCTIEPNSGIVAVPDKRLDKLAEIWQTNKK 62 Query: 207 -----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QGAG+G++FL H ++H+V +++ Sbjct: 63 TPAIVEFV--DIAGLVKGASQGAGLGNKFLGHIRECDAIVHVVRCFDDD 109 >gi|302671228|ref|YP_003831188.1| GTP-binding protein YchF [Butyrivibrio proteoclasticus B316] gi|302395701|gb|ADL34606.1| GTP-binding protein YchF [Butyrivibrio proteoclasticus B316] Length = 365 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 21/107 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--------------- 206 +GI+GLPN GKST S+T A A+YPF T+ PN+G+V K Sbjct: 3 LGIVGLPNVGKSTLFNSLTNAGALAANYPFATIDPNVGVVAVPDKRLKALGDLYHSKKVT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL + T ++H+V E+ Sbjct: 63 PATIEFV--DIAGLVKGASKGEGLGNQFLANIRETDAIVHVVRCFED 107 >gi|317130992|ref|YP_004097274.1| GTP-binding protein YchF [Bacillus cellulosilyticus DSM 2522] gi|315475940|gb|ADU32543.1| GTP-binding protein YchF [Bacillus cellulosilyticus DSM 2522] Length = 366 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDYRLDKLTELVEPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI++ A +G G+G++FL H + + H+V +EN+ Sbjct: 66 TAFEFTDIAGIVEGASKGEGLGNKFLSHIRQVDAISHVVRCFNDENI 112 >gi|312112741|ref|YP_003991057.1| GTP-binding protein YchF [Geobacillus sp. Y4.1MC1] gi|311217842|gb|ADP76446.1| GTP-binding protein YchF [Geobacillus sp. Y4.1MC1] Length = 366 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKE----- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGIVEVPDERLKVLTEMFNPKRTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL H + + +V +EN+ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFTDENI 112 >gi|323486705|ref|ZP_08092026.1| hypothetical protein HMPREF9474_03777 [Clostridium symbiosum WAL-14163] gi|323692156|ref|ZP_08106399.1| GTP-binding protein YchF [Clostridium symbiosum WAL-14673] gi|323400086|gb|EGA92463.1| hypothetical protein HMPREF9474_03777 [Clostridium symbiosum WAL-14163] gi|323503730|gb|EGB19549.1| GTP-binding protein YchF [Clostridium symbiosum WAL-14673] Length = 376 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 21/111 (18%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYK---------- 206 I +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V Y+ Sbjct: 10 FIMKLGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVPVPDYRLGKLSALYNS 69 Query: 207 --------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 70 EKITPAVIEFV--DIAGLVKGASKGEGLGNQFLSNIREVDAIVHVVRCFED 118 >gi|295101307|emb|CBK98852.1| GTP-binding protein YchF [Faecalibacterium prausnitzii L2-6] Length = 377 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYK-------------- 206 +GI+GLPN GKST ++T K + A+YPF T+ PN GIV K Sbjct: 3 LGIVGLPNVGKSTLFNAITSTKNAEAANYPFCTIEPNSGIVAVPDKRLDKLAEIWQTNKK 62 Query: 207 -----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QGAG+G++FL H ++H+V +++ Sbjct: 63 TPAIVEFV--DIAGLVKGASQGAGLGNKFLGHIRECDAIVHVVRCFDDD 109 >gi|153855364|ref|ZP_01996513.1| hypothetical protein DORLON_02527 [Dorea longicatena DSM 13814] gi|149752184|gb|EDM62115.1| hypothetical protein DORLON_02527 [Dorea longicatena DSM 13814] Length = 366 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 17/104 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY--KEFI 209 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V E Y K+ I Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVTVPDERLNVLGEMYHTKKII 62 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A DI G++K A +G G+G++FL + ++H+V E Sbjct: 63 PAAIEFVDIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFE 106 >gi|315924333|ref|ZP_07920556.1| GTP-dependent nucleic acid-binding protein EngD [Pseudoramibacter alactolyticus ATCC 23263] gi|315622404|gb|EFV02362.1| GTP-dependent nucleic acid-binding protein EngD [Pseudoramibacter alactolyticus ATCC 23263] Length = 359 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 IGIIGLPN GKST ++T+A + A+YPF T+ PN+G+V E Y+ Sbjct: 3 IGIIGLPNVGKSTIFNAITKAGAESANYPFCTIDPNVGVVSVPDERLKVLGEMYQTKKIV 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + + H+V +++ Sbjct: 63 PTTIEFV--DIAGLVKGASKGEGLGNKFLANIREVDAVAHVVRCFDDD 108 >gi|257440067|ref|ZP_05615822.1| GTP-binding protein YchF [Faecalibacterium prausnitzii A2-165] gi|257197419|gb|EEU95703.1| GTP-binding protein YchF [Faecalibacterium prausnitzii A2-165] Length = 377 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYK-------------- 206 +GI+GLPN GKST ++T K + A+YPF T+ PN GIV K Sbjct: 3 LGIVGLPNVGKSTLFNAITSTKNAEAANYPFCTIEPNSGIVAVPDKRLDKLAEIWQTSKK 62 Query: 207 -----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QGAG+G++FL H ++H+V +++ Sbjct: 63 TPAIVEFV--DIAGLVKGASQGAGLGNKFLGHIRECDAIVHVVRCFDDD 109 >gi|56965865|ref|YP_177599.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus clausii KSM-K16] gi|56912111|dbj|BAD66639.1| GTP-binding protein [Bacillus clausii KSM-K16] Length = 366 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E E + Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDVRLEKLTELVKPKKTVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI++ A +G G+G++FL H + + H+V +EN+ Sbjct: 66 TAFEFTDIAGIVEGASKGEGLGNQFLSHIRQVDAISHVVRCFADENI 112 >gi|295402138|ref|ZP_06812097.1| GTP-binding protein YchF [Geobacillus thermoglucosidasius C56-YS93] gi|294975821|gb|EFG51440.1| GTP-binding protein YchF [Geobacillus thermoglucosidasius C56-YS93] Length = 366 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKE----- 207 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ E + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAESANYPFCTIEPNVGIVEVPDERLKVLTEMFNPKRTVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL H + + +V +EN+ Sbjct: 66 TVFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICQVVRCFTDENI 112 >gi|328949909|ref|YP_004367244.1| GTP-binding protein YchF [Marinithermus hydrothermalis DSM 14884] gi|328450233|gb|AEB11134.1| GTP-binding protein YchF [Marinithermus hydrothermalis DSM 14884] Length = 375 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 29/143 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++T+A A+YPF T+ N+G+V Sbjct: 6 IGIVGLPNVGKSTLFNAITKAGALAANYPFATIDKNVGVVTVPDERLPALQRVFAKGERV 65 Query: 203 ----EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-NV--QAAY 255 Y EF+ DI G++K AH+G G+G++FL + + H+V E+ NV A Sbjct: 66 PPVVPTYVEFV--DIAGLVKGAHKGEGLGNQFLANIREVAAIAHVVRCFEDPNVVHVAGR 123 Query: 256 QCILDELSAYNSELR-KKIEIVG 277 LD++ N+EL +E++G Sbjct: 124 VDPLDDIETINTELALADLEVLG 146 >gi|291549483|emb|CBL25745.1| GTP-binding protein YchF [Ruminococcus torques L2-14] Length = 365 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 17/104 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY--KEFI 209 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V E Y K+ I Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVTVPDKRLDVLGEMYHTKKII 62 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A DI G++K A +G G+G++FL + ++H+V E Sbjct: 63 PAAIEFVDIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFE 106 >gi|15616613|ref|NP_244919.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus halodurans C-125] gi|10176676|dbj|BAB07770.1| GTP-binding protein [Bacillus halodurans C-125] Length = 366 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDPRLQKLTELVNPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 F DI GI++ A +G G+G++FL H + + H+V +EN+ + + ++ Sbjct: 66 TAFEFTDIAGIVEGASKGEGLGNQFLSHIRQVDAISHVVRCFDDENITHVSGSVDPIRDI 125 Query: 263 SAYNSEL 269 S N EL Sbjct: 126 SVINLEL 132 >gi|160942664|ref|ZP_02089907.1| hypothetical protein FAEPRAM212_00136 [Faecalibacterium prausnitzii M21/2] gi|158446019|gb|EDP23022.1| hypothetical protein FAEPRAM212_00136 [Faecalibacterium prausnitzii M21/2] Length = 377 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYK-------------- 206 +GI+GLPN GKST ++T K + A+YPF T+ PN GIV K Sbjct: 3 LGIVGLPNVGKSTLFNAITSTKNAEAANYPFCTIEPNSGIVAVPDKRLDKLAEIWQTNKK 62 Query: 207 -----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QGAG+G++FL H ++H+V +++ Sbjct: 63 TPAIVEFV--DIAGLVKGASQGAGLGNKFLGHIRECDAIVHVVRCFDDD 109 >gi|46446386|ref|YP_007751.1| translation-associated GTPase [Candidatus Protochlamydia amoebophila UWE25] gi|46400027|emb|CAF23476.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 365 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 17/104 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++T + ++YPF T+ PN+GIV K Sbjct: 7 VGIVGLPNVGKSTLFNALTSNQAAASNYPFCTIDPNIGIVDVVDDRLDRLSALSNSKKIV 66 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 Y DI GI++ A +G G+G++FL + T ++H+V E Sbjct: 67 YANMQFVDIAGIVEGASKGEGLGNKFLSNIRETDAIVHVVRCFE 110 >gi|153815666|ref|ZP_01968334.1| hypothetical protein RUMTOR_01902 [Ruminococcus torques ATCC 27756] gi|317501940|ref|ZP_07960124.1| GTP-binding protein YchF [Lachnospiraceae bacterium 8_1_57FAA] gi|331088245|ref|ZP_08337164.1| GTP-dependent nucleic acid-binding protein engD [Lachnospiraceae bacterium 3_1_46FAA] gi|145846907|gb|EDK23825.1| hypothetical protein RUMTOR_01902 [Ruminococcus torques ATCC 27756] gi|316896620|gb|EFV18707.1| GTP-binding protein YchF [Lachnospiraceae bacterium 8_1_57FAA] gi|330408489|gb|EGG87955.1| GTP-dependent nucleic acid-binding protein engD [Lachnospiraceae bacterium 3_1_46FAA] Length = 365 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 17/104 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY--KEFI 209 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V E Y K+ I Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVTVPDKRLDVLGEMYHTKKII 62 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A DI G++K A +G G+G++FL + ++H+V E Sbjct: 63 PAAIEFVDIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFE 106 >gi|317133094|ref|YP_004092408.1| GTP-binding protein YchF [Ethanoligenens harbinense YUAN-3] gi|315471073|gb|ADU27677.1| GTP-binding protein YchF [Ethanoligenens harbinense YUAN-3] Length = 364 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 21/106 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------K 202 +GI+GLPN GKST ++T A + A+YPF T+ PN+G+V Sbjct: 3 LGIVGLPNVGKSTLFNAITNAGAESANYPFCTIEPNVGVVAVPDERLKVLTDMYHAVKTT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 EF+ DI G+++ A +G G+G++FL H ++H+V E Sbjct: 63 PAVVEFV--DIAGLVRGASKGEGLGNKFLSHIREVDAIVHVVRCFE 106 >gi|255322589|ref|ZP_05363734.1| GTP-binding protein YchF [Campylobacter showae RM3277] gi|255300497|gb|EET79769.1| GTP-binding protein YchF [Campylobacter showae RM3277] Length = 367 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 19/109 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-----------------KE 203 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN +V K Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAESANYPFCTIEPNKAVVPVPDKRLGELAKIVNPNKI 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 Y DI G++K A G G+G++FL + T V+LHIV E EN+ Sbjct: 65 QYSTIEFVDIAGLVKGASAGEGLGNKFLSNIRETEVILHIVRCFEDENI 113 >gi|160893902|ref|ZP_02074681.1| hypothetical protein CLOL250_01457 [Clostridium sp. L2-50] gi|156864280|gb|EDO57711.1| hypothetical protein CLOL250_01457 [Clostridium sp. L2-50] Length = 389 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V E Y Sbjct: 27 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVAVPDERLDKLTEMYHSAKTT 86 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 87 PAVIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDT 132 >gi|15643996|ref|NP_229045.1| GTP-dependent nucleic acid-binding protein EngD [Thermotoga maritima MSB8] gi|4981794|gb|AAD36315.1|AE001779_17 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 357 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 31/154 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------------KEGYKEFI 209 +GI+GLPNAGKS+F +T +PF T+ PN+GI+ EG K+ + Sbjct: 1 MGIVGLPNAGKSSFFNFLTDNSVPAESFPFCTIEPNVGILVVPDERIEILAKNEGSKKVV 60 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-NVQAAYQCILDELS 263 + DI G++K A +G G+G++FL H + V+ H+V E+ V YQ Sbjct: 61 HPFVEVVDIAGLVKGASKGEGLGNQFLDHISKVDVIAHVVRLFEDGRVSHPYQ------- 113 Query: 264 AYNSELRKKIEIVG----LSQIDTVDSDTLARKK 293 N + ++ IEIV L ++TV R K Sbjct: 114 --NVDPKRDIEIVETELILKDLETVQKRLEKRMK 145 >gi|323141492|ref|ZP_08076381.1| GTP-binding protein YchF [Phascolarctobacterium sp. YIT 12067] gi|322414072|gb|EFY04902.1| GTP-binding protein YchF [Phascolarctobacterium sp. YIT 12067] Length = 368 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFIL---------- 210 ++GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K + Sbjct: 6 EVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVDVPDKRLDVLSDMFKSKKI 65 Query: 211 -------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++K A +G G+G++FL H + +V E+ Sbjct: 66 VPAAMRFVDIAGLVKGASKGEGLGNKFLSHIREVDAVAEVVRCFED 111 >gi|223039495|ref|ZP_03609783.1| GTP-binding protein YchF [Campylobacter rectus RM3267] gi|222879291|gb|EEF14384.1| GTP-binding protein YchF [Campylobacter rectus RM3267] Length = 367 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 19/109 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-----------------KE 203 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN +V K Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAESANYPFCTIEPNKAVVPVPDKRLGELAKIVNPNKI 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 Y DI G++K A G G+G++FL + T V+LHIV E EN+ Sbjct: 65 QYSTIEFVDIAGLVKGASTGEGLGNKFLSNIRETEVILHIVRCFEDENI 113 >gi|197302737|ref|ZP_03167790.1| hypothetical protein RUMLAC_01466 [Ruminococcus lactaris ATCC 29176] gi|197298135|gb|EDY32682.1| hypothetical protein RUMLAC_01466 [Ruminococcus lactaris ATCC 29176] Length = 365 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 17/104 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY--KEFI 209 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V E Y K+ I Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVTVPDKRLDVLGEMYHTKKII 62 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A DI G++K A +G G+G++FL + ++H+V E Sbjct: 63 PAAIEFVDIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFE 106 >gi|170289360|ref|YP_001739598.1| GTP-binding protein YchF [Thermotoga sp. RQ2] gi|281412964|ref|YP_003347043.1| GTP-binding protein YchF [Thermotoga naphthophila RKU-10] gi|170176863|gb|ACB09915.1| GTP-binding protein YchF [Thermotoga sp. RQ2] gi|281374067|gb|ADA67629.1| GTP-binding protein YchF [Thermotoga naphthophila RKU-10] Length = 360 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 31/154 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------------KEGYKEFI 209 +GI+GLPNAGKS+F +T +PF T+ PN+GI EG K+ + Sbjct: 4 VGIVGLPNAGKSSFFNFLTDNSVPAESFPFCTIEPNVGIFVVPDERIELLAKNEGSKKVV 63 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-NVQAAYQCILDELS 263 + DI G++K A +G G+G++FL H + V+ H+V E+ V YQ Sbjct: 64 HPFVEVVDIAGLVKGASKGEGLGNQFLDHISKVDVIAHVVRLFEDGRVSHPYQ------- 116 Query: 264 AYNSELRKKIEIVG----LSQIDTVDSDTLARKK 293 N + ++ IEIV L ++TV R K Sbjct: 117 --NVDPKRDIEIVETELILKDLETVQKRLEKRMK 148 >gi|266622037|ref|ZP_06114972.1| GTP-binding protein YchF [Clostridium hathewayi DSM 13479] gi|288866276|gb|EFC98574.1| GTP-binding protein YchF [Clostridium hathewayi DSM 13479] Length = 365 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 21/107 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------K 202 +GIIGLPN GKST S+T+A + A+YPF T+ PN+G+V Sbjct: 3 LGIIGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVPVPDERLGKLAALYDSAKIT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 63 PAVIEFV--DIAGLVKGASKGEGLGNQFLSNIREVDAIVHVVRCFED 107 >gi|218133483|ref|ZP_03462287.1| hypothetical protein BACPEC_01350 [Bacteroides pectinophilus ATCC 43243] gi|217990858|gb|EEC56864.1| hypothetical protein BACPEC_01350 [Bacteroides pectinophilus ATCC 43243] Length = 365 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------K 202 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVAVPDDRLNKLAALYNSAKIT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E++ Sbjct: 63 PAVIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDS 108 >gi|167753401|ref|ZP_02425528.1| hypothetical protein ALIPUT_01675 [Alistipes putredinis DSM 17216] gi|167658026|gb|EDS02156.1| hypothetical protein ALIPUT_01675 [Alistipes putredinis DSM 17216] Length = 366 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ + I Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLIRLAEIDNPKRVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T+ ++H++ E + Sbjct: 66 TTIEIVDIAGLVKGASKGEGLGNKFLANIRNTNAIIHVLRCFEND 110 >gi|238916662|ref|YP_002930179.1| hypothetical protein EUBELI_00724 [Eubacterium eligens ATCC 27750] gi|238872022|gb|ACR71732.1| Hypothetical protein EUBELI_00724 [Eubacterium eligens ATCC 27750] Length = 365 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------K 202 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVAVPDDRLDKLAALYNSAKIT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E++ Sbjct: 63 PAVIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDS 108 >gi|68075615|ref|XP_679727.1| GTP-binding protein [Plasmodium berghei strain ANKA] gi|56500540|emb|CAH98343.1| GTP-binding protein, putative [Plasmodium berghei] Length = 506 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 86/348 (24%), Positives = 157/348 (45%), Gaps = 65/348 (18%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F D + +SG GG +R K ++ G GG GG+V +++ ++ LI + Sbjct: 47 RFCDFLWITAKSGKGGNPNYKKQRSKKLKGEG----YGGHGGNVILKSKKSIYDLI--KI 100 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQR------- 114 +Q KA GE K N G G+D ++ VPVGT V + + C + R Sbjct: 101 EQKIKANDGE-DFKENSRGKDGKDKIIFVPVGTIVRKR----IYCQKKNQNNRKIYKSVF 155 Query: 115 ----------IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 +++A GG GG + FK + P + +L E +LI D+ Sbjct: 156 WYQFLNENEELLVARGGKGGISYSLFKKHDFRLPELSEKILLELEL------RLINDVAF 209 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQ 222 IG+ N+GK++ +S+++ I +TT P++ + +G + L D P + NAH+ Sbjct: 210 IGIENSGKTSLCSSLSKYYGNINSDIYTTTIPHVSNINYIDGV-QITLLDTPYLFYNAHK 268 Query: 223 GAGIGDRFLKHTERTHVLLHIVSAL--------EENVQAAY------------------Q 256 G R L+H R+ +++++V ++N++ Y Sbjct: 269 DKARGKRILRHIYRSKLIIYVVDVSNDKLKNVDDQNIEDYYLKSLKNGENQNKSDKIDPH 328 Query: 257 CILDE-LSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQV 303 CI DE L Y ++ K+I+++ +++ + D L +K+ +AT+C + Sbjct: 329 CIDDENLKEYYNDTIKQIKMLR-NELFLFNPDYLKKKELVVATKCDML 375 >gi|950066|emb|CAA83699.1| similar to GTP-bind. GTP1/OBG family [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 178 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------EGYKEFI----- 209 +GI+GLPN GKST ++T +K + A+YPF T+ PN+GIV+ E YK F Sbjct: 5 VGIVGLPNVGKSTLFNAITNSKVEAANYPFATIEPNVGIVEVPDYRLDELYKIFNSKKRV 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+I A QG G+G+ FL + +T + +V ++ Sbjct: 65 ATTIEFVDIAGLIAGASQGEGLGNAFLANIRQTDAICQVVRCFDD 109 >gi|291541647|emb|CBL14757.1| GTP-binding protein YchF [Ruminococcus bromii L2-63] Length = 364 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 +GI+GLPN GKST ++T A + A+YPF T+ PN+G+V E Y Sbjct: 3 LGIVGLPNVGKSTLFNAITDAGAQSANYPFCTIEPNIGVVAVPDKRLDKLAEMYDPDKYT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E + Sbjct: 63 PASIEFV--DIAGLVKGASKGEGLGNKFLSNIRECDAIVHVVRCFEND 108 >gi|291522691|emb|CBK80984.1| GTP-binding protein YchF [Coprococcus catus GD/7] Length = 366 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 +GI+GLPN GKST S+T+A A+YPF T+ PN+GIV E Y Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGALSANYPFATIDPNVGIVAVPDERIVKLGELYHTKKVT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E++ Sbjct: 63 PATIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDD 108 >gi|87309135|ref|ZP_01091272.1| probable GTP-binding protein [Blastopirellula marina DSM 3645] gi|87288126|gb|EAQ80023.1| probable GTP-binding protein [Blastopirellula marina DSM 3645] Length = 363 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 41/174 (23%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T A +YPF T+ PN+GIV E + FI Sbjct: 4 GIVGLPNVGKSTLFNALTAAGIASENYPFCTIEPNVGIVPVPDERLEIIQSFIKTQKVIP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILDE 261 L DI GI++ A +G G+G++FL H ++H+V ++ V + I D Sbjct: 64 AVLQLVDIAGIVRGASEGEGLGNKFLSHIREVDAIVHVVRCFADSDVIHVDGSVDPIRD- 122 Query: 262 LSAYNSELRKKIEIVGLSQIDTVDS------------DTLARKKNELATQCGQV 303 + ++EL L+ + TV+S D A+ + EL QC V Sbjct: 123 IETIDTELM-------LADLQTVESSKDRAAKSARSGDKEAKARVELLEQCYAV 169 >gi|300123610|emb|CBK24882.2| unnamed protein product [Blastocystis hominis] Length = 451 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------------------- 200 +G +G P+AGKSTF +VT K+ +YPFTT+ PN GI Sbjct: 8 VGCVGKPSAGKSTFFNAVTDGSAKVGNYPFTTIEPNTGITYYMTDCPCKTKGLSKECHPL 67 Query: 201 ---VKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 K+G ++ L D+ G+I A +GAG+G++FL HVL+HIV Sbjct: 68 YGFCKDGQRQIPLKLLDVAGLIPGASEGAGLGNKFLDDLRHAHVLVHIV 116 >gi|332652497|ref|ZP_08418242.1| GTP-binding protein YchF [Ruminococcaceae bacterium D16] gi|332517643|gb|EGJ47246.1| GTP-binding protein YchF [Ruminococcaceae bacterium D16] Length = 365 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 22/110 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 +GI+GLPN GKST ++T A + A+YPF T+ PN+G+V E Y Sbjct: 3 LGIVGLPNVGKSTLFNAITNAGAESANYPFCTIDPNVGMVAVPDYRLDKLSEMYHPKKTT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL + T ++H+V +ENV Sbjct: 63 PAVIEFV--DIAGLVKGASRGEGLGNKFLANIRMTDAIVHVVRCFDDENV 110 >gi|160880614|ref|YP_001559582.1| GTP-binding protein YchF [Clostridium phytofermentans ISDg] gi|160429280|gb|ABX42843.1| GTP-binding protein YchF [Clostridium phytofermentans ISDg] Length = 365 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 21/107 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 +GI+GLPN GKST S+T+A + A+YPF T+ PN+GIV + Y Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNIGIVPVPDVRLKVLSDLYNSEKIL 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 63 PAAIEFV--DIAGLVKGASKGEGLGNQFLSNIREVDAIVHVVRCFED 107 >gi|166032702|ref|ZP_02235531.1| hypothetical protein DORFOR_02417 [Dorea formicigenerans ATCC 27755] gi|166027059|gb|EDR45816.1| hypothetical protein DORFOR_02417 [Dorea formicigenerans ATCC 27755] Length = 366 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 17/104 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY--KEFI 209 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V E Y K+ I Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVTVPDERLNVLGEMYHTKKII 62 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A DI G++K A +G G+G++FL + ++H+V E Sbjct: 63 PAAIEFVDIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFE 106 >gi|251799805|ref|YP_003014536.1| GTP-binding protein YchF [Paenibacillus sp. JDR-2] gi|247547431|gb|ACT04450.1| GTP-binding protein YchF [Paenibacillus sp. JDR-2] Length = 370 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 G++GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 10 GVVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVEVPDYRLDKLTELVQPNKTVP 69 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 F DI G++ A +G G+G++FL H ++H+V E EN+ Sbjct: 70 TAFEFVDIAGLVAGASKGEGLGNKFLAHIREVDAIVHVVRCFEDENI 116 >gi|167841310|ref|ZP_02467994.1| translation-associated GTPase [Burkholderia thailandensis MSMB43] Length = 364 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 28/149 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ + E I Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLKALSEIIKPERVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E ENV A LD++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVSPLDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 N+EL L+ + TV+ LAR Sbjct: 126 EVINTEL-------ALADLGTVEK-ALAR 146 >gi|119719625|ref|YP_920120.1| translation-associated GTPase [Thermofilum pendens Hrk 5] gi|119524745|gb|ABL78117.1| GTPase of unknown function-like protein [Thermofilum pendens Hrk 5] Length = 399 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 24/113 (21%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------VKEG 204 + +GI+G PN GKSTF A+ T K A YPFTT+ PN+G+ VK+ Sbjct: 1 MTVQVGIVGKPNTGKSTFFAASTLIDVKRAPYPFTTIEPNVGVGYVRVQCVCKELGVKDN 60 Query: 205 YKEFI-----------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 + I L D+ G++ A +G G+G+ FL H R VL+H+V A Sbjct: 61 PRNSICIDGWRFIPVELIDVAGLVPGAWEGRGLGNMFLDHLRRAPVLIHVVDA 113 >gi|295697819|ref|YP_003591057.1| GTP-binding protein YchF [Bacillus tusciae DSM 2912] gi|295413421|gb|ADG07913.1| GTP-binding protein YchF [Bacillus tusciae DSM 2912] Length = 359 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 27/141 (19%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI--------------- 209 +GLPN GKST ++TRA + A+YPF T+ PN+G+V+ + + Sbjct: 1 MGLPNVGKSTLFNAITRAGAETANYPFCTIDPNVGVVQVPDERLVRLAELFHPGKVVPAV 60 Query: 210 --LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE---NVQAAYQCILDELSA 264 DI G++K A G G+G++FL H ++H+V E+ A +D++ Sbjct: 61 FEFVDIAGLVKGASHGEGLGNQFLSHIREVDAIVHVVRCFEDPDITHVAGRVSPVDDIET 120 Query: 265 YNSELRKKIEIVGLSQIDTVD 285 N EL L+ ++TV+ Sbjct: 121 INVEL-------NLADLETVE 134 >gi|291518686|emb|CBK73907.1| GTP-binding protein YchF [Butyrivibrio fibrisolvens 16/4] Length = 366 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 21/107 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--------------- 206 +GI+GLPN GKST S+T+A A+YPF T+ PN+G+V K Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGALAANYPFATIDPNVGVVSVPDKRLDALTKMYNSKKTV 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 63 PATIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFED 107 >gi|253580154|ref|ZP_04857421.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848673|gb|EES76636.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 365 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK---EGYK------------ 206 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V E K Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVTVPDERLKLLGDFYHSKKVT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E++ Sbjct: 63 PAVIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDS 108 >gi|186686385|ref|YP_001869581.1| GTP-dependent nucleic acid-binding protein EngD [Nostoc punctiforme PCC 73102] gi|186468837|gb|ACC84638.1| GTP-binding protein YchF [Nostoc punctiforme PCC 73102] Length = 363 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST F A V AK + A++PF T+ PN+G+V Sbjct: 5 GIVGLPNVGKSTLFNAVVANAKAEAANFPFCTIEPNVGVVAVPDERLNVLAKIASSVQTI 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QG G+G++FL H ++H+V E + Sbjct: 65 PARVEFV--DIAGLVKGASQGEGLGNQFLSHIREVDAIVHVVRCFEND 110 >gi|328953682|ref|YP_004371016.1| GTP-binding protein YchF [Desulfobacca acetoxidans DSM 11109] gi|328454006|gb|AEB09835.1| GTP-binding protein YchF [Desulfobacca acetoxidans DSM 11109] Length = 364 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 21/105 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK------ 206 G++GLPN GKST ++T + ++A YPFTT+ PN GIV E K Sbjct: 6 GLVGLPNVGKSTLFNALTAGRAEVAGYPFTTINPNTGIVPVPDPRLATLAELLKPPKVTP 65 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 EF+ DI G+I+ A QG G+G++FL H +L+H+V E Sbjct: 66 TTIEFV--DIAGLIQGASQGEGLGNQFLAHIRDVDLLVHVVRCFE 108 >gi|255659988|ref|ZP_05405397.1| GTP-binding protein YchF [Mitsuokella multacida DSM 20544] gi|260847741|gb|EEX67748.1| GTP-binding protein YchF [Mitsuokella multacida DSM 20544] Length = 368 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 17/101 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 ++GI+GLPN GKST ++T+A + A++PF T+ PN+G+V K Sbjct: 5 EVGIVGLPNVGKSTLFNAITKAGAEAANFPFCTIEPNVGVVAVPDPRLKVLHELYNSKKT 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI G++K A +G G+G++FL+H + + H+V Sbjct: 65 TPASVRFVDIAGLVKGASKGEGLGNKFLEHIRQVDAVAHVV 105 >gi|288554590|ref|YP_003426525.1| GTP-binding protein YchF [Bacillus pseudofirmus OF4] gi|288545750|gb|ADC49633.1| GTP-dependent nucleic acid-binding protein EngD [Bacillus pseudofirmus OF4] Length = 366 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDHRLQTLTDLVDPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI++ A +G G+G++FL H + + H+V ++ Sbjct: 66 TAFEFTDIAGIVEGASKGEGLGNKFLSHIRQVDAISHVVRCFADD 110 >gi|229828515|ref|ZP_04454584.1| hypothetical protein GCWU000342_00579 [Shuttleworthia satelles DSM 14600] gi|229793109|gb|EEP29223.1| hypothetical protein GCWU000342_00579 [Shuttleworthia satelles DSM 14600] Length = 365 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 30/168 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +GI+GLPN GKST S+T+A ++A+YPF T+ PN+G+V Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAEMANYPFCTIDPNVGVVSVPDERLRVLTEMNHSRKTI 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCI 258 EF+ DI G++K A +G G+G++FL + ++H+V ++ +V + I Sbjct: 63 PAVIEFV--DIAGLVKGASKGEGLGNQFLGNIRECDAIVHVVRCFDDGNVIHVDGSVDPI 120 Query: 259 LDELSAYNSELR-KKIEIVGLSQIDT---VDSDTLARKKNELATQCGQ 302 D + N EL +EIV + +D ARK+ EL + Q Sbjct: 121 RD-IETINLELLFSDMEIVERRRAKVGKQARNDKTARKEAELLNRLYQ 167 >gi|223983862|ref|ZP_03634026.1| hypothetical protein HOLDEFILI_01307 [Holdemania filiformis DSM 12042] gi|223964186|gb|EEF68534.1| hypothetical protein HOLDEFILI_01307 [Holdemania filiformis DSM 12042] Length = 260 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+++ + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITQSQVEAANYPFATIQPNVGVVEVPDERIDNIAALFNPKKIIR 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 F DI G++K A +G G+G++FL H + + H+V + Sbjct: 66 TTFEFTDIAGLVKGASKGEGLGNQFLSHIRQVDAVCHVVRCFD 108 >gi|42561432|ref|NP_975883.1| GTP-dependent nucleic acid-binding protein EngD [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492930|emb|CAE77525.1| GTP-BINDING PROTEIN [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301321049|gb|ADK69692.1| GTP-binding protein YchF [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 364 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 26/153 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------EGYKEFI----- 209 +GI+GLPN GKST ++T +K + A+YPF T+ PN+GIV+ E +K F Sbjct: 5 VGIVGLPNVGKSTLFNAITNSKVEAANYPFATIEPNVGIVEVPDYRLDELFKIFNSKKRV 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 DI G+I A QG G+G+ FL + +T + +V ++ + +D + Sbjct: 65 ATTIEFVDIAGLIAGASQGEGLGNAFLANIRQTDAICQVVRCFDDKEIMHVENSIDPI-- 122 Query: 265 YNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 + IEI+ L ++ D T+ ++ +++A Sbjct: 123 ------RDIEIINL-ELMLADQATVKKRLDKIA 148 >gi|157164621|ref|YP_001466472.1| translation-associated GTPase [Campylobacter concisus 13826] gi|112801647|gb|EAT98991.1| GTP-binding protein YchF [Campylobacter concisus 13826] Length = 367 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 19/109 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-----------------KE 203 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN IV K Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAESANYPFCTIEPNKAIVPVPDKRLNELAKIVSPNKI 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 Y DI G++K A G G+G++FL + T ++LHIV E EN+ Sbjct: 65 QYSTIEFVDIAGLVKGASSGEGLGNKFLSNIRETELILHIVRCFEDENI 113 >gi|91214912|ref|ZP_01251885.1| putative ATP/GTP-binding protein [Psychroflexus torquis ATCC 700755] gi|91187339|gb|EAS73709.1| putative ATP/GTP-binding protein [Psychroflexus torquis ATCC 700755] Length = 364 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST S++ AK + A++PF T+ PN+G+V E + + Sbjct: 4 GIVGLPNVGKSTLFNSLSNAKAQSANFPFCTIEPNIGVVNVPDPRLEQLESLVDPERVVP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T +LH++ +++ Sbjct: 64 ATVEIVDIAGLVKGASKGEGLGNQFLGNIRETDAILHVLRCFDDD 108 >gi|313893984|ref|ZP_07827550.1| GTP-binding protein YchF [Veillonella sp. oral taxon 158 str. F0412] gi|313441548|gb|EFR59974.1| GTP-binding protein YchF [Veillonella sp. oral taxon 158 str. F0412] Length = 368 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 17/106 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEF 208 ++GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V G K Sbjct: 6 EVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVDVPDNRLAVLAEMFGSKRI 65 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + A DI G+++ A +G G+G++FL H + + ++ E+ Sbjct: 66 LPAAMRFVDIAGLVEGASKGEGLGNKFLSHIRQVDAIAQVIRCFED 111 >gi|297585579|ref|YP_003701359.1| GTP-binding protein YchF [Bacillus selenitireducens MLS10] gi|297144036|gb|ADI00794.1| GTP-binding protein YchF [Bacillus selenitireducens MLS10] Length = 366 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDPRLDKLTQMVVPDKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI++ A +G G+G++FL H + + H+V ++ Sbjct: 66 TAFEFTDIAGIVEGASKGEGLGNQFLSHIRQVDAISHVVRCFSDD 110 >gi|225574506|ref|ZP_03783116.1| hypothetical protein RUMHYD_02583 [Blautia hydrogenotrophica DSM 10507] gi|225038293|gb|EEG48539.1| hypothetical protein RUMHYD_02583 [Blautia hydrogenotrophica DSM 10507] Length = 365 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V + Y+ Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVAVPDERLRLLGDFYQSKKVT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 63 PAVIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDT 108 >gi|325282979|ref|YP_004255520.1| GTP-binding protein YchF [Deinococcus proteolyticus MRP] gi|324314788|gb|ADY25903.1| GTP-binding protein YchF [Deinococcus proteolyticus MRP] Length = 366 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 28/134 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++TRA A++PF T+ PN+G V Sbjct: 6 IGIVGLPNVGKSTLFNAITRANAVAANFPFATIEPNVGRVTVPDERLSALSQVFTKGDRV 65 Query: 203 ----EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQ 256 Y EF+ DI G++K A +G G+G++FL + + H+V E++ + A + Sbjct: 66 PPIIPTYVEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIAHVVRCFEDDNVIHVAGR 123 Query: 257 C-ILDELSAYNSEL 269 +D++ N+EL Sbjct: 124 VDPVDDIETINTEL 137 >gi|57241935|ref|ZP_00369875.1| GTP-binding protein YchF [Campylobacter upsaliensis RM3195] gi|57017127|gb|EAL53908.1| GTP-binding protein YchF [Campylobacter upsaliensis RM3195] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 19/109 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK---EGYKEFI-------- 209 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN +V+ E KE Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNRAMVEVPDERLKELAKIVKPEKI 64 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI G++K A +G G+G++FL + T V+LHIV +EN+ Sbjct: 65 LHSLIEFVDIAGLVKGASKGEGLGNKFLSNIRETEVILHIVRCFDDENI 113 >gi|291563995|emb|CBL42811.1| GTP-binding protein YchF [butyrate-producing bacterium SS3/4] Length = 365 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 21/107 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------K 202 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVPVPDFRLKLLSDLYNSEKIT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 63 PAVIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFED 107 >gi|291524591|emb|CBK90178.1| GTP-binding protein YchF [Eubacterium rectale DSM 17629] Length = 366 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 +GI+GLPN GKST S+T+A A+YPF T+ PN+GIV E Y Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGALSANYPFATIDPNIGIVSVPDERIVKLGELYHTKKVT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 63 PATIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDT 108 >gi|148270654|ref|YP_001245114.1| GTP-dependent nucleic acid-binding protein EngD [Thermotoga petrophila RKU-1] gi|147736198|gb|ABQ47538.1| GTP-binding protein YchF [Thermotoga petrophila RKU-1] Length = 357 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 31/154 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------------KEGYKEFI 209 +GI+GLPNAGKS+F +T +PF T+ PN+GI EG K+ + Sbjct: 1 MGIVGLPNAGKSSFFNFLTDNSVPAESFPFCTIEPNVGIFVVPDERIELLAKNEGSKKVV 60 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-NVQAAYQCILDELS 263 + DI G++K A +G G+G++FL H + V+ H+V E+ V YQ Sbjct: 61 HPFVEVVDIAGLVKGASKGEGLGNQFLDHISKVDVIAHVVRLFEDGRVSHPYQ------- 113 Query: 264 AYNSELRKKIEIVG----LSQIDTVDSDTLARKK 293 N + ++ IEIV L ++TV R K Sbjct: 114 --NVDPKRDIEIVETELILKDLETVQKRLEKRMK 145 >gi|171056962|ref|YP_001789311.1| GTP-binding protein YchF [Leptothrix cholodnii SP-6] gi|170774407|gb|ACB32546.1| GTP-binding protein YchF [Leptothrix cholodnii SP-6] Length = 364 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ +G + + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVELPDPRLQGLAQIVQPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A QG G+G++FL H T ++++V E++ Sbjct: 66 AIVEFVDIAGLVAGASQGEGLGNKFLSHIRETDAIVNVVRCFEDD 110 >gi|167629109|ref|YP_001679608.1| GTP-binding protein ychf [Heliobacterium modesticaldum Ice1] gi|167591849|gb|ABZ83597.1| GTP-binding protein ychf [Heliobacterium modesticaldum Ice1] Length = 366 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 17/99 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ + E + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVEVPDPRLDKLTEMVKPNRVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI G+++ A +G G+G++FL H ++H+V Sbjct: 66 AVVRFVDIAGLVRGASKGEGLGNKFLSHIREVDAVIHVV 104 >gi|313672105|ref|YP_004050216.1| gtp-binding protein ychf [Calditerrivibrio nitroreducens DSM 19672] gi|312938861|gb|ADR18053.1| GTP-binding protein YchF [Calditerrivibrio nitroreducens DSM 19672] Length = 363 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFI--------- 209 + GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV + FI Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAHVESANYPFCTIDPNIGIVNVPDDRLYFIASVINPKKV 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL H + + HIV E + Sbjct: 64 TPTTIEFVDIAGLVRGASKGEGLGNQFLTHIRQVDAIAHIVRCFEND 110 >gi|76811417|ref|YP_334952.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia pseudomallei 1710b] gi|126438532|ref|YP_001060574.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia pseudomallei 668] gi|134283112|ref|ZP_01769813.1| GTP-binding protein YchF [Burkholderia pseudomallei 305] gi|167721383|ref|ZP_02404619.1| translation-associated GTPase [Burkholderia pseudomallei DM98] gi|167740354|ref|ZP_02413128.1| translation-associated GTPase [Burkholderia pseudomallei 14] gi|167817570|ref|ZP_02449250.1| translation-associated GTPase [Burkholderia pseudomallei 91] gi|167896048|ref|ZP_02483450.1| translation-associated GTPase [Burkholderia pseudomallei 7894] gi|167912693|ref|ZP_02499784.1| translation-associated GTPase [Burkholderia pseudomallei 112] gi|167920660|ref|ZP_02507751.1| translation-associated GTPase [Burkholderia pseudomallei BCC215] gi|254180506|ref|ZP_04887104.1| GTP-binding protein YchF [Burkholderia pseudomallei 1655] gi|254190490|ref|ZP_04896998.1| GTP-binding protein YchF [Burkholderia pseudomallei Pasteur 52237] gi|254260871|ref|ZP_04951925.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia pseudomallei 1710a] gi|254300742|ref|ZP_04968187.1| GTP-binding protein YchF [Burkholderia pseudomallei 406e] gi|76580870|gb|ABA50345.1| GTP-binding protein YchF [Burkholderia pseudomallei 1710b] gi|126218025|gb|ABN81531.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia pseudomallei 668] gi|134245307|gb|EBA45400.1| GTP-binding protein YchF [Burkholderia pseudomallei 305] gi|157810556|gb|EDO87726.1| GTP-binding protein YchF [Burkholderia pseudomallei 406e] gi|157938166|gb|EDO93836.1| GTP-binding protein YchF [Burkholderia pseudomallei Pasteur 52237] gi|184211045|gb|EDU08088.1| GTP-binding protein YchF [Burkholderia pseudomallei 1655] gi|254219560|gb|EET08944.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia pseudomallei 1710a] Length = 364 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 28/149 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ + E I Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLKALAEIIKPERVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E ENV A LD++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVSPLDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 N+EL L+ + TV+ LAR Sbjct: 126 EVINTEL-------ALADLGTVEK-ALAR 146 >gi|282897871|ref|ZP_06305866.1| GTP-binding protein, HSR1-related [Raphidiopsis brookii D9] gi|281197015|gb|EFA71916.1| GTP-binding protein, HSR1-related [Raphidiopsis brookii D9] Length = 400 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 GI+GLPN GKST F A V AK + A++PF T+ PN+GIV K E I+ Sbjct: 42 GIVGLPNVGKSTLFNAVVANAKAEAANFPFCTIEPNVGIVAVPDDRLNVLAKLASSEQII 101 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A QG G+G++FL H ++H+V E + Sbjct: 102 PARVEFVDIAGLVQGASQGEGLGNQFLSHIREVDAIVHVVRCFEND 147 >gi|120435832|ref|YP_861518.1| GTP-dependent nucleic acid-binding protein EngD [Gramella forsetii KT0803] gi|117577982|emb|CAL66451.1| GTP-dependent nucleic acid-binding protein EngD [Gramella forsetii KT0803] Length = 364 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G+V + + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNIGVVNVPDQRLLKLEELVNPERVMP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T +LH++ E++ Sbjct: 64 ATVEIVDIAGLVKGASKGEGLGNQFLGNIRETDAILHVLRCFEDD 108 >gi|295109199|emb|CBL23152.1| GTP-binding protein YchF [Ruminococcus obeum A2-162] Length = 365 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 21/107 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK---EGYK------------ 206 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V E K Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVTVPDERLKLIGDFYHSKKVT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 63 PAVIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFED 107 >gi|53717368|ref|YP_105289.1| translation-associated GTPase [Burkholderia mallei ATCC 23344] gi|53720671|ref|YP_109657.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia pseudomallei K96243] gi|67640240|ref|ZP_00439054.1| GTP-binding protein YchF [Burkholderia mallei GB8 horse 4] gi|121598050|ref|YP_990263.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia mallei SAVP1] gi|124382759|ref|YP_001024761.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia mallei NCTC 10229] gi|126447580|ref|YP_001079100.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia mallei NCTC 10247] gi|126452709|ref|YP_001067827.1| translation-associated GTPase [Burkholderia pseudomallei 1106a] gi|167004156|ref|ZP_02269926.1| GTP-binding protein YchF [Burkholderia mallei PRL-20] gi|167825973|ref|ZP_02457444.1| translation-associated GTPase [Burkholderia pseudomallei 9] gi|167847459|ref|ZP_02472967.1| translation-associated GTPase [Burkholderia pseudomallei B7210] gi|167904430|ref|ZP_02491635.1| translation-associated GTPase [Burkholderia pseudomallei NCTC 13177] gi|217424726|ref|ZP_03456223.1| GTP-binding protein YchF [Burkholderia pseudomallei 576] gi|226192991|ref|ZP_03788602.1| GTP-binding protein YchF [Burkholderia pseudomallei Pakistan 9] gi|237813961|ref|YP_002898412.1| GTP-binding protein YchF [Burkholderia pseudomallei MSHR346] gi|242316670|ref|ZP_04815686.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia pseudomallei 1106b] gi|254175829|ref|ZP_04882488.1| GTP-binding protein YchF [Burkholderia mallei ATCC 10399] gi|254198553|ref|ZP_04904974.1| GTP-binding protein YchF [Burkholderia pseudomallei S13] gi|254203256|ref|ZP_04909618.1| GTP-binding protein YchF [Burkholderia mallei FMH] gi|254208592|ref|ZP_04914941.1| GTP-binding protein YchF [Burkholderia mallei JHU] gi|254355773|ref|ZP_04972052.1| GTP-binding protein YchF [Burkholderia mallei 2002721280] gi|52211085|emb|CAH37073.1| putative GTP-binding protein [Burkholderia pseudomallei K96243] gi|52423338|gb|AAU46908.1| GTP-binding protein YchF [Burkholderia mallei ATCC 23344] gi|121225848|gb|ABM49379.1| GTP-binding protein YchF [Burkholderia mallei SAVP1] gi|124290779|gb|ABN00049.1| GTP-binding protein YchF [Burkholderia mallei NCTC 10229] gi|126226351|gb|ABN89891.1| GTP-binding protein YchF [Burkholderia pseudomallei 1106a] gi|126240434|gb|ABO03546.1| GTP-binding protein YchF [Burkholderia mallei NCTC 10247] gi|147746301|gb|EDK53379.1| GTP-binding protein YchF [Burkholderia mallei FMH] gi|147751279|gb|EDK58347.1| GTP-binding protein YchF [Burkholderia mallei JHU] gi|148024744|gb|EDK82927.1| GTP-binding protein YchF [Burkholderia mallei 2002721280] gi|160696872|gb|EDP86842.1| GTP-binding protein YchF [Burkholderia mallei ATCC 10399] gi|169655293|gb|EDS87986.1| GTP-binding protein YchF [Burkholderia pseudomallei S13] gi|217392182|gb|EEC32207.1| GTP-binding protein YchF [Burkholderia pseudomallei 576] gi|225934961|gb|EEH30937.1| GTP-binding protein YchF [Burkholderia pseudomallei Pakistan 9] gi|237502765|gb|ACQ95083.1| GTP-binding protein YchF [Burkholderia pseudomallei MSHR346] gi|238520930|gb|EEP84386.1| GTP-binding protein YchF [Burkholderia mallei GB8 horse 4] gi|242139909|gb|EES26311.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia pseudomallei 1106b] gi|243060453|gb|EES42639.1| GTP-binding protein YchF [Burkholderia mallei PRL-20] Length = 364 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ + E I Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLKALAEIIKPERVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E ENV A LD++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVSPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 EVINTEL 132 >gi|311111865|ref|YP_003983087.1| GTP-binding protein YchF [Rothia dentocariosa ATCC 17931] gi|310943359|gb|ADP39653.1| GTP-binding protein YchF [Rothia dentocariosa ATCC 17931] Length = 361 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY-KEFIL 210 IGI+GLPN GKST ++TR A+YPF T+ PN+G+V E + E IL Sbjct: 5 IGIVGLPNVGKSTLFNALTRNTVLAANYPFATIEPNIGVVNLPDARLNRLAEIFGSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI+K A +G G+G++FL + H + +V A ++ Sbjct: 65 PATVSFVDIAGIVKGASEGEGLGNKFLANIREAHAIAQVVRAFDD 109 >gi|292493878|ref|YP_003529317.1| GTP-binding protein YchF [Nitrosococcus halophilus Nc4] gi|291582473|gb|ADE16930.1| GTP-binding protein YchF [Nitrosococcus halophilus Nc4] Length = 362 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFIL 210 GI+GLPN GKST ++TRA + +YPF T+ PN+G+V G ++ + Sbjct: 6 GIVGLPNVGKSTLFNALTRAGIEAQNYPFCTIDPNVGVVPVPDPRLDKIAAIVGPQQVLP 65 Query: 211 A-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 A DI G++ A QG G+G++FL H T + H+V E+ V A + L ++ Sbjct: 66 ATMMFVDIAGLVAGASQGEGLGNQFLAHIRETEAIAHVVRCFEDQNVVHVAGEVNPLGDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL L+ ++TV+ Sbjct: 126 EVINTEL-------ALADLETVE 141 >gi|317050924|ref|YP_004112040.1| GTP-binding protein YchF [Desulfurispirillum indicum S5] gi|316946008|gb|ADU65484.1| GTP-binding protein YchF [Desulfurispirillum indicum S5] Length = 367 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A A+YPF T+ PN+G+V Sbjct: 6 GIVGLPNVGKSTIFNALTKAGAASANYPFCTIDPNVGVVSVPDPRLNTIAAMINPQRIVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++K A QG G+G++FL H + H+V E EN+ Sbjct: 66 TTMEFV--DIAGLVKGASQGEGLGNQFLSHIRAVDAIAHVVRCFEDENI 112 >gi|153809805|ref|ZP_01962473.1| hypothetical protein RUMOBE_00186 [Ruminococcus obeum ATCC 29174] gi|149833983|gb|EDM89063.1| hypothetical protein RUMOBE_00186 [Ruminococcus obeum ATCC 29174] Length = 371 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 21/107 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV---KEGYK------------ 206 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V E K Sbjct: 9 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVTVPDERLKLLGDFYHSKKVT 68 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 69 PAVIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFED 113 >gi|269468548|gb|EEZ80197.1| GTP-dependent nucleic acid-binding protein EngD [uncultured SUP05 cluster bacterium] Length = 186 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 24/129 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK---------------- 206 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIESANYPFCTIEPNVGIVPMNDKRLEQLADIVNPKKILP 65 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQCI-LD 260 EF+ DI G+++ A +G G+G++FL + T ++H+V E++ + + + LD Sbjct: 66 TTMEFV--DIAGLVEGASKGEGLGNQFLTNIRETDAIVHVVRCFEDDDIIHVSGKVSPLD 123 Query: 261 ELSAYNSEL 269 ++ N+EL Sbjct: 124 DIEIINTEL 132 >gi|315638342|ref|ZP_07893521.1| GTP-dependent nucleic acid-binding protein EngD [Campylobacter upsaliensis JV21] gi|315481553|gb|EFU72178.1| GTP-dependent nucleic acid-binding protein EngD [Campylobacter upsaliensis JV21] Length = 367 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 19/109 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK---EGYKEFI-------- 209 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN +V+ E KE Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNRAMVEVPDERLKELAKIVKPEKI 64 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI G++K A +G G+G++FL + T V+LHIV +EN+ Sbjct: 65 LHSLIEFVDIAGLVKGASKGEGLGNKFLSNIRETEVILHIVRCFDDENI 113 >gi|320105496|ref|YP_004181086.1| GTP-binding protein YchF [Terriglobus saanensis SP1PR4] gi|319924017|gb|ADV81092.1| GTP-binding protein YchF [Terriglobus saanensis SP1PR4] Length = 365 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 75/147 (51%), Gaps = 31/147 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T AK + A+YPF T+ PN G+V Sbjct: 4 NCGIVGLPNVGKSTIFNALTSAKAQAANYPFCTIEPNTGVVTVPDERLAKIAALIKPKSL 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-I 258 EFI DI G+++ A +G G+G++FL H T + H+V +++ V A + Sbjct: 64 VPTSMEFI--DIAGLVEGASKGEGLGNQFLGHIRATDAICHVVRCFDDSEIVHVAGKVDP 121 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTVD 285 L ++ N+EL L+ +DTV+ Sbjct: 122 LHDIDIINTELL-------LADLDTVE 141 >gi|238026098|ref|YP_002910329.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia glumae BGR1] gi|237875292|gb|ACR27625.1| GTP-binding protein YchF [Burkholderia glumae BGR1] Length = 364 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/151 (33%), Positives = 75/151 (49%), Gaps = 32/151 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKAISAIVKPERIVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV A LD Sbjct: 66 AVVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGRVSPLD 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 ++ N+EL L+ + TV+ LAR Sbjct: 124 DIEVINTEL-------ALADLATVEK-ALAR 146 >gi|331703897|ref|YP_004400584.1| GTP binding protein [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802452|emb|CBW54607.1| GTP binding protein [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 364 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------EGYKEFI----- 209 +GI+GLPN GKST ++T +K + A+YPF T+ PN+GIV+ E +K F Sbjct: 5 VGIVGLPNVGKSTLFNAITNSKVEAANYPFATIEPNVGIVEVPDYRLDELFKIFNSKKRV 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+I A QG G+G+ FL + +T + +V ++ Sbjct: 65 ATTIEFVDIAGLIAGASQGEGLGNAFLANIRQTDAICQVVRCFDD 109 >gi|258645202|ref|ZP_05732671.1| GTP-binding protein YchF [Dialister invisus DSM 15470] gi|260402552|gb|EEW96099.1| GTP-binding protein YchF [Dialister invisus DSM 15470] Length = 368 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 22/110 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++T+A + A++PF T+ PN+G+V+ Sbjct: 7 IGIVGLPNVGKSTLFNAITKAGAEAANFPFCTIEPNVGVVEVPDHRIYDLAGIFNPKKTT 66 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 + F+ DI G++ A +G G+G++FL H T + H+V +EN+ Sbjct: 67 PAFTRFV--DIAGLVAGASKGEGLGNQFLSHIRETDAIAHVVRCFDDENI 114 >gi|256383849|gb|ACU78419.1| GTP-binding protein YchF [Mycoplasma mycoides subsp. capri str. GM12] gi|256384680|gb|ACU79249.1| GTP-binding protein YchF [Mycoplasma mycoides subsp. capri str. GM12] gi|296455938|gb|ADH22173.1| GTP-binding protein YchF [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 364 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------EGYKEFI----- 209 +GI+GLPN GKST ++T +K + A+YPF T+ PN+GIV+ E +K F Sbjct: 5 VGIVGLPNVGKSTLFNAITNSKVEAANYPFATIEPNVGIVEVPDYRLDELFKIFNSKKRV 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+I A QG G+G+ FL + +T + +V ++ Sbjct: 65 ATTIEFVDIAGLIAGASQGEGLGNAFLANIRQTDAICQVVRCFDD 109 >gi|240146616|ref|ZP_04745217.1| GTP-binding protein YchF [Roseburia intestinalis L1-82] gi|257201239|gb|EEU99523.1| GTP-binding protein YchF [Roseburia intestinalis L1-82] Length = 366 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 +GI+GLPN GKST S+T+A A+YPF T+ PN+GIV E Y Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGALSANYPFATIDPNVGIVSVPDERIVKLGELYHTKKVT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 63 PATIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDT 108 >gi|302386847|ref|YP_003822669.1| GTP-binding protein YchF [Clostridium saccharolyticum WM1] gi|302197475|gb|ADL05046.1| GTP-binding protein YchF [Clostridium saccharolyticum WM1] Length = 365 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------K 202 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVPVPDVRLGQLAALYDSAKIT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 63 PAVIEFV--DIAGLVKGASKGEGLGNQFLSNIREVDAIVHVVRCFEDT 108 >gi|225377860|ref|ZP_03755081.1| hypothetical protein ROSEINA2194_03519 [Roseburia inulinivorans DSM 16841] gi|225210298|gb|EEG92652.1| hypothetical protein ROSEINA2194_03519 [Roseburia inulinivorans DSM 16841] Length = 366 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 +GI+GLPN GKST S+T+A A+YPF T+ PN+GIV E Y Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGALSANYPFATIDPNVGIVSVPDERIVKLGELYHTKKVT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 63 PATIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDT 108 >gi|34557710|ref|NP_907525.1| GTP-dependent nucleic acid-binding protein EngD [Wolinella succinogenes DSM 1740] gi|34483427|emb|CAE10425.1| PUTATIVE GTP-BINDING PROTEIN [Wolinella succinogenes] Length = 366 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-----------------KE 203 IGI+GLPN GKST ++T+A+ + A+YPF T+ PN IV K Sbjct: 5 IGIVGLPNVGKSTTFNALTKAQNAEAANYPFCTIEPNKAIVPVPDSRLEALAKIVNPQKI 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y DI G++K A +G G+G++FL + + T +LHIV E+ Sbjct: 65 QYSVVEFVDIAGLVKGASKGEGLGNQFLANIKETEAILHIVRCFED 110 >gi|302754864|ref|XP_002960856.1| hypothetical protein SELMODRAFT_74913 [Selaginella moellendorffii] gi|300171795|gb|EFJ38395.1| hypothetical protein SELMODRAFT_74913 [Selaginella moellendorffii] Length = 429 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 29/136 (21%) Query: 142 NPGILGQEKIIWL-------KLKLIADIGIIGLPNAGKST-FLASVTRAKPKIADYPFTT 193 N G+ ++ +WL K+ + GI+GLPN GKST F A V AK + A++PF T Sbjct: 37 NVGLFPRQHALWLFRRGMSSKISMSLRSGIVGLPNVGKSTLFNALVENAKAQAANFPFCT 96 Query: 194 LYPNLGIVK-------------------EGYKEFILADIPGIIKNAHQGAGIGDRFLKHT 234 + PN+GIV EF+ DI G++K A +G G+G++FL+H Sbjct: 97 IEPNVGIVAVPDTRLSVLTDISSSKQTVPASMEFV--DIAGLVKGASKGEGLGNKFLQHI 154 Query: 235 ERTHVLLHIVSALEEN 250 ++ +V +++ Sbjct: 155 REVDSIVQVVRCFDDS 170 >gi|291536605|emb|CBL09717.1| GTP-binding protein YchF [Roseburia intestinalis M50/1] gi|291541051|emb|CBL14162.1| GTP-binding protein YchF [Roseburia intestinalis XB6B4] Length = 366 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 +GI+GLPN GKST S+T+A A+YPF T+ PN+GIV E Y Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGALSANYPFATIDPNVGIVSVPDERIVKLGELYHTKKVT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 63 PATIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDT 108 >gi|229827497|ref|ZP_04453566.1| hypothetical protein GCWU000182_02886 [Abiotrophia defectiva ATCC 49176] gi|229788435|gb|EEP24549.1| hypothetical protein GCWU000182_02886 [Abiotrophia defectiva ATCC 49176] Length = 365 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 21/107 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVAVPDERLNVLGKMHNSGRIV 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 63 PAAIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFED 107 >gi|330815408|ref|YP_004359113.1| GTP-binding protein YchF [Burkholderia gladioli BSR3] gi|327367801|gb|AEA59157.1| GTP-binding protein YchF [Burkholderia gladioli BSR3] Length = 364 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 24/129 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKAISAIVNPERIVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV A LD Sbjct: 66 AVVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGRVSPLD 123 Query: 261 ELSAYNSEL 269 ++ N+EL Sbjct: 124 DIEVINTEL 132 >gi|238923804|ref|YP_002937320.1| translation-associated GTPase [Eubacterium rectale ATCC 33656] gi|238875479|gb|ACR75186.1| translation-associated GTPase [Eubacterium rectale ATCC 33656] gi|291528019|emb|CBK93605.1| GTP-binding protein YchF [Eubacterium rectale M104/1] Length = 366 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 +GI+GLPN GKST S+T+A A+YPF T+ PN+GIV E Y Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGALSANYPFATIDPNVGIVSVPDERIVKLGELYHTKKVT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 63 PATIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDT 108 >gi|33599894|ref|NP_887454.1| translation-associated GTPase [Bordetella bronchiseptica RB50] gi|33567491|emb|CAE31404.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 363 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++TRA +YPF T+ PN+G+V+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLDKLAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++ A QG G+G++FL H T+ ++++V E+ Sbjct: 66 ATVEFVDIAGLVAGASQGEGLGNQFLSHIRETNAIINVVRCFED 109 >gi|325954941|ref|YP_004238601.1| GTP-binding protein YchF [Weeksella virosa DSM 16922] gi|323437559|gb|ADX68023.1| GTP-binding protein YchF [Weeksella virosa DSM 16922] Length = 363 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A+YPF T+ PN+G V +E + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANYPFCTIEPNVGTVSVPDKRLNKLEELVKPERVLP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 + DI G++K A +G G+G++FL + H ++H++ E EN+ Sbjct: 64 AVVEIVDIAGLVKGASKGEGLGNQFLGNIRECHAIIHVLRCFENENI 110 >gi|160872401|ref|ZP_02062533.1| GTP-binding protein YchF [Rickettsiella grylli] gi|159121200|gb|EDP46538.1| GTP-binding protein YchF [Rickettsiella grylli] Length = 363 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK---------------- 206 GI+GLPN GKST ++T+A +A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAVANYPFCTIEPNIGIVPVPDKRLHALAKIVQPQKIIP 65 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A G G+G++FL H +LH+V E + Sbjct: 66 TTLEFV--DIAGLVHGAAHGEGLGNQFLAHIREVDAILHVVRCFENS 110 >gi|84995084|ref|XP_952264.1| GTP-binding protein [Theileria annulata strain Ankara] gi|65302425|emb|CAI74532.1| GTP-binding protein, putative [Theileria annulata] Length = 375 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/219 (22%), Positives = 113/219 (51%), Gaps = 18/219 (8%) Query: 80 GAKGEDVVLTVPVGT----QVFEEDGISLIC--DLDQEGQRIILAPGGNGGFGNAHFKSS 133 G D V+ +P+G+ +V +D I +++++A GG GG G + FK Sbjct: 102 GLHASDTVINIPLGSILRKRVRRDDRTRCIFWHQFLNPDEKLLIARGGRGGLGPSCFKKH 161 Query: 134 TNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTT 193 N+ +G+ + L+L+L D+ IGLPN+GK++ ++S+T +I +T Sbjct: 162 DNRL------AEVGESITLELELRLFNDVAFIGLPNSGKTSLISSLTSYMTRIGPEEGST 215 Query: 194 LYPNLGIVK--EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-N 250 P++ ++K +G + + D+P + +N + + + +H R+ ++ +++SA E+ + Sbjct: 216 TRPHIALIKFLDGV-DIRVMDLPPLSQNTDK--DMVKKITRHLYRSKLIAYVISAAEDGD 272 Query: 251 VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 + + + +S + + K+E++ +++ D + +TL Sbjct: 273 HMETLKSLREIVSGSKTFVDSKLEMIIMTKCDMIHRNTL 311 >gi|256545269|ref|ZP_05472634.1| GTP-binding protein YchF [Anaerococcus vaginalis ATCC 51170] gi|256399096|gb|EEU12708.1| GTP-binding protein YchF [Anaerococcus vaginalis ATCC 51170] Length = 365 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 24/166 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILA--------- 211 +GI+GLPN GKST ++T+A +IA+YPF T+ PN+G+V Y+ LA Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAEIANYPFCTIDPNVGLVNVPDYRVDYLAKMHNSKKIV 62 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-NVQAAYQCI--LDE 261 DI G++K A +G G+G++FL + T ++ ++ + NV I L + Sbjct: 63 PAAIEFYDIAGLVKGASKGEGLGNKFLSNIRETDAIVEVLRCFNDPNVTHVDGNIDPLRD 122 Query: 262 LSAYNSEL----RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQV 303 + N EL + +E V + + SD AR + EL + +V Sbjct: 123 IETINFELILSDLELVEKVLVKREKVAKSDKSARSEVELLKRIKEV 168 >gi|118603029|ref|YP_904244.1| GTP-binding protein YchF [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567968|gb|ABL02773.1| GTP-binding protein YchF [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 363 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T++ A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNALTQSGVGSANYPFCTIEPNVGIVPINDSRLDELAKIVNPQKILS 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQCI-LDEL 262 DI G++K A +G G+G++FL + T ++H+V A +++ + + + LD++ Sbjct: 66 TTMKFVDIAGLVKGASKGEGLGNKFLTNIRETDAIIHVVRAFDDDDIIHVSKKISPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 EIINTEL 132 >gi|121607462|ref|YP_995269.1| GTP-binding protein YchF [Verminephrobacter eiseniae EF01-2] gi|121552102|gb|ABM56251.1| GTP-binding protein YchF [Verminephrobacter eiseniae EF01-2] Length = 364 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++TRA +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVELPDPRLGQLAAIVAPERIVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A QG G+G++FL H T ++++V E++ Sbjct: 66 AIVEFV--DIAGLVAGASQGEGLGNQFLAHIRETDAIVNVVRCFEDD 110 >gi|158320397|ref|YP_001512904.1| GTP-binding protein YchF [Alkaliphilus oremlandii OhILAs] gi|158140596|gb|ABW18908.1| GTP-binding protein YchF [Alkaliphilus oremlandii OhILAs] Length = 364 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILA--------- 211 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V Y+ +L Sbjct: 3 LGIVGLPNVGKSTLFNAITQAGAESANYPFCTIEPNVGVVSVPDYRLNVLRDMHNSEKVL 62 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL H ++H+V +++ Sbjct: 63 PAAIEFYDIAGLVRGASKGEGLGNKFLSHIREVASIVHVVRCFDDS 108 >gi|227874389|ref|ZP_03992573.1| GTP-binding protein [Oribacterium sinus F0268] gi|227839797|gb|EEJ50243.1| GTP-binding protein [Oribacterium sinus F0268] Length = 296 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV---KEGYK------------ 206 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V E K Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIDPNVGVVAVPDERLKLLSDLYHSEKIT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+++ A +G G+G++FL + T ++H+V E++ Sbjct: 63 PAVIEFV--DIAGLVRGASKGEGLGNQFLGNIRETDAIVHVVRCFEDD 108 >gi|157363830|ref|YP_001470597.1| GTP-dependent nucleic acid-binding protein EngD [Thermotoga lettingae TMO] gi|157314434|gb|ABV33533.1| GTP-binding protein YchF [Thermotoga lettingae TMO] Length = 361 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI- 209 GI+GLPN+GKSTF ++T +YPF T+ PN G++ EG ++ I Sbjct: 5 GIVGLPNSGKSTFFNAITDQNVPAEEYPFCTIEPNNGVLTVVDERVNKLAQMEGSQKIIY 64 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++K A G G+G++FL H + ++LH+V + Sbjct: 65 PFIQIVDIAGLVKGASHGEGLGNQFLDHISKVDLILHVVRCFK 107 >gi|124007676|ref|ZP_01692379.1| GTP-binding protein [Microscilla marina ATCC 23134] gi|123986798|gb|EAY26570.1| GTP-binding protein [Microscilla marina ATCC 23134] Length = 267 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST +++ AK + A+YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALSSAKAESANYPFCTIEPNVGVVQVPDQRLKALEKLVNPQQVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H++ E++ Sbjct: 66 AVIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIIHVIRCFEDD 110 >gi|78188550|ref|YP_378888.1| GTP-dependent nucleic acid-binding protein EngD [Chlorobium chlorochromatii CaD3] gi|78170749|gb|ABB27845.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3] Length = 363 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 32/163 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV---KEGYKEFI---------- 209 GI+GLPN GKST ++T + + A+YPF T+ PN+G V E ++ Sbjct: 6 GIVGLPNVGKSTLFNAITAKQAEAANYPFCTIEPNVGTVLVPDERMQQIANVVKTPTLVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 + DI G++K A +G G+G++FL H ++H+V E EN+ I +D++ Sbjct: 66 AVLEIVDIAGLVKGASKGEGLGNQFLSHIREVDAIVHVVRCFEDENIIHVQGKIDPVDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS--DTL---ARKKNELATQC 300 + +EL L+ +D+++ D L RK+ EL Q Sbjct: 126 ATIETELM-------LADLDSMERRMDRLRKNVRKEKELQQQV 161 >gi|220933715|ref|YP_002512614.1| GTP-binding protein YchF [Thioalkalivibrio sp. HL-EbGR7] gi|219995025|gb|ACL71627.1| GTP-binding protein YchF [Thioalkalivibrio sp. HL-EbGR7] Length = 363 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 31/145 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++TRA + +YPF T+ PN+G+V Sbjct: 6 GIVGLPNVGKSTLFNALTRAGIQAENYPFCTIDPNVGVVPVPDPRLDALAAIVKPEKLIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 EF+ DI G++ A QG G+G++FL H T + H+V E + +D LS Sbjct: 66 TAMEFV--DIAGLVAGASQGEGLGNQFLAHIRETDAIAHVVRCFENDDVIHVAGRVDPLS 123 Query: 264 ---AYNSELRKKIEIVGLSQIDTVD 285 N+EL L+ ++TV+ Sbjct: 124 DIEVINTEL-------ALADLETVE 141 >gi|325679191|ref|ZP_08158782.1| GTP-binding protein YchF [Ruminococcus albus 8] gi|324109120|gb|EGC03345.1| GTP-binding protein YchF [Ruminococcus albus 8] Length = 364 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 +G++GLPN GKST ++T A + A+YPF T+ PN+GIV E Y Sbjct: 3 LGMVGLPNVGKSTLFNALTNAGAESANYPFCTIEPNVGIVSVPDKRLDALAEMYHPVKFT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E++ Sbjct: 63 PATLEFV--DIAGLVKGASKGEGLGNKFLANIREVDAIVHVVRCFEDD 108 >gi|225012780|ref|ZP_03703214.1| GTP-binding protein YchF [Flavobacteria bacterium MS024-2A] gi|225003054|gb|EEG41030.1| GTP-binding protein YchF [Flavobacteria bacterium MS024-2A] Length = 379 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 18/120 (15%) Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----- 202 +E + K+K + GI+GLPN GKST ++ AK + A++PF T+ PN+G+V Sbjct: 5 KESLFLTKIKFMK-AGIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNIGVVNVPDSR 63 Query: 203 -EGYKEFI-----------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 E + + + DI G++K A +G G+G++FL + T +LH++ + + Sbjct: 64 LEKLESLVNPERVLPATVEIVDIAGLVKGASKGEGLGNQFLANIRETDAILHVLRCFDND 123 >gi|85057816|ref|YP_456732.1| translation-associated GTPase [Aster yellows witches'-broom phytoplasma AYWB] gi|84789921|gb|ABC65653.1| GTP-binding protein [Aster yellows witches'-broom phytoplasma AYWB] Length = 363 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 33/185 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +GIIGLPN GKST ++T+ + A+YPF T+ PN+GIV+ Sbjct: 3 VGIIGLPNVGKSTLFNALTKMQVLEANYPFATIEPNVGIVEVSDSRLQTLSQIFQSQKTI 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-NVQAAYQC--IL 259 + EF DI G++ A +G G+G++FL H + H+V E+ N+ + + Sbjct: 63 SAFIEF--KDIAGLVSGASKGEGLGNQFLSHIRNVDAICHVVKCFEDPNIAHVKETNNPV 120 Query: 260 DELSAYNSELRKKIEIVGLSQIDTVDSDTLA--RKKNELATQCGQVPFEFSSITGHGIPQ 317 +E+ +EL L+ ++ ++ L ++KN+L + Q + I H Q Sbjct: 121 EEIDIIQTEL-------ALADLEQIEKRLLKLGKQKNKLNKELLQEKALITKIKTHLTTQ 173 Query: 318 ILECL 322 L+ L Sbjct: 174 DLKKL 178 >gi|319651084|ref|ZP_08005218.1| YyaF protein [Bacillus sp. 2_A_57_CT2] gi|317397254|gb|EFV77958.1| YyaF protein [Bacillus sp. 2_A_57_CT2] Length = 366 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDHRLNKLTELVQPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL H + +V ++ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRCFADD 110 >gi|33594042|ref|NP_881686.1| translation-associated GTPase [Bordetella pertussis Tohama I] gi|33564116|emb|CAE43388.1| conserved hypothetical protein [Bordetella pertussis Tohama I] gi|332383459|gb|AEE68306.1| GTP-dependent nucleic acid-binding protein EngD [Bordetella pertussis CS] Length = 363 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++TRA +YPF T+ PN+G+V+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLDKLAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++ A QG G+G++FL H T+ ++++V E+ Sbjct: 66 ATVEFVDIAGLVAGASQGEGLGNQFLSHIRETNAIVNVVRCFED 109 >gi|54298643|ref|YP_125012.1| GTP-dependent nucleic acid-binding protein EngD [Legionella pneumophila str. Paris] gi|53752428|emb|CAH13860.1| hypothetical protein lpp2707 [Legionella pneumophila str. Paris] Length = 363 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 27/152 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV + + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVTVPDSRLDNLSNIVKPQQVVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS-- 263 DI G++K A G G+G++FL + T + H+V + + + +D LS Sbjct: 66 ATMQFVDIAGLVKGASSGEGLGNQFLANIRETDAIAHVVRCFDNSDVVHVEGRVDPLSDI 125 Query: 264 -AYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 N+EL L+ ++T++ L KN Sbjct: 126 EVINTEL-------ALADMETLEKSLLKVGKN 150 >gi|139439734|ref|ZP_01773125.1| Hypothetical protein COLAER_02156 [Collinsella aerofaciens ATCC 25986] gi|133774884|gb|EBA38704.1| Hypothetical protein COLAER_02156 [Collinsella aerofaciens ATCC 25986] Length = 283 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 79/138 (57%), Gaps = 6/138 (4%) Query: 200 IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL----EENVQAAY 255 +V+ G +++AD+PG+I+ A +G G+G +FL+H ERT +++H+V + + Y Sbjct: 1 MVRAGEYSYVVADVPGLIEGASEGKGLGHQFLRHIERTALIMHVVDMTGGFEDRDPVEDY 60 Query: 256 QCILDELSAYNSELRKKIEIVGLSQIDTV-DSDTLARKKNELATQCGQVPFEFSSITGHG 314 + I EL Y +EL ++ +IV ++ D +D +A K A G + F S++TG G Sbjct: 61 RIINRELEQYGAELSERPQIVVANKCDAPGTADKIADLKR-AALDDGHMFFAVSAVTGAG 119 Query: 315 IPQILECLHDKIFSIRGE 332 + ++ + +++ +R E Sbjct: 120 LNTLMLAVGEQVAKLRAE 137 >gi|18376285|emb|CAD21398.1| probable GTP-binding protein [Neurospora crassa] Length = 372 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ VT+ K ++A Y FTTL G+++ G E L D+PGII+ Sbjct: 65 ARIALVGFPSVGKSTFLSKVTKTKSEVASYAFTTLTAIPGVLEYGGAEIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 125 ASEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA 159 >gi|171693883|ref|XP_001911866.1| hypothetical protein [Podospora anserina S mat+] gi|170946890|emb|CAP73694.1| unnamed protein product [Podospora anserina S mat+] Length = 371 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ VT+ K ++A Y FTTL G+++ G E L D+PGII+ Sbjct: 65 ARIALVGFPSVGKSTFLSKVTKTKSEVASYAFTTLTAIPGVLEYGGAEIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 125 ASEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA 159 >gi|325971938|ref|YP_004248129.1| GTP-binding protein YchF [Spirochaeta sp. Buddy] gi|324027176|gb|ADY13935.1| GTP-binding protein YchF [Spirochaeta sp. Buddy] Length = 368 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 + GI+GLPN GKST +++T A ++A+YPF T+ PN+GIV K Sbjct: 4 NCGIVGLPNVGKSTIFSALTAAPAEVANYPFCTIDPNVGIVSVPDPRLDKIVELIPPAKV 63 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F DI G++ A +G G+G+RFL V+ H+V ++ Sbjct: 64 VPATFEFVDIAGLVAGASKGEGLGNRFLASIREVGVIAHVVRCFDD 109 >gi|317970481|ref|ZP_07971871.1| GTP-binding protein YchF [Synechococcus sp. CB0205] Length = 363 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V A+ + A+YPF T+ PN G+V KE I Sbjct: 5 GIVGLPNVGKSTLFNALVANAQAEAANYPFCTIEPNSGVVAVPDPRLQQLSDLSKSKELI 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A QG G+G++FL + ++H+V E++ Sbjct: 65 PTRVEFVDIAGLVKGASQGEGLGNKFLANIREVDAIVHVVRCFEDD 110 >gi|52842860|ref|YP_096659.1| GTP-dependent nucleic acid-binding protein EngD [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54295492|ref|YP_127907.1| translation-associated GTPase [Legionella pneumophila str. Lens] gi|52629971|gb|AAU28712.1| GTP binding protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53755324|emb|CAH16820.1| hypothetical protein lpl2579 [Legionella pneumophila str. Lens] gi|307611529|emb|CBX01206.1| hypothetical protein LPW_29051 [Legionella pneumophila 130b] Length = 363 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 27/152 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV + + + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVTVPDSRLDNLSDIVKPQQVLH 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS-- 263 DI G++K A G G+G++FL + T + H+V + + + +D LS Sbjct: 66 ATMQFVDIAGLVKGASSGEGLGNQFLANIRETDAIAHVVRCFDNSDVVHVEGRVDPLSDI 125 Query: 264 -AYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 N+EL L+ ++T++ L KN Sbjct: 126 EVINTEL-------ALADMETLEKSLLKVGKN 150 >gi|268315605|ref|YP_003289324.1| GTP-binding protein YchF [Rhodothermus marinus DSM 4252] gi|262333139|gb|ACY46936.1| GTP-binding protein YchF [Rhodothermus marinus DSM 4252] Length = 366 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST +++RA + A+YPF T+ PN+G+V E E Sbjct: 6 GIVGLPNVGKSTLFNALSRAGAESANYPFCTIEPNVGVVPVPDERLERLAELAGSAKVTP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++ A +G G+G++FL H +LH+V E+ Sbjct: 66 TTIEFVDIAGLVAGASKGEGLGNQFLAHIREVDAILHVVRCFED 109 >gi|188586450|ref|YP_001917995.1| GTP-binding protein YchF [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351137|gb|ACB85407.1| GTP-binding protein YchF [Natranaerobius thermophilus JW/NM-WN-LF] Length = 363 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 17/104 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------ 209 IGI+GLPN GKST ++T+A A++PF T+ PN+G+V E E + Sbjct: 3 IGIVGLPNVGKSTLFNAITQAGADSANFPFCTIDPNIGVVDVPDGRLEKLTELVNPKKTT 62 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 DI G++K A +G G+G++FL + ++H+V E Sbjct: 63 PTAIEFVDIAGLVKGASKGEGLGNQFLSNIREVDAIVHVVRCFE 106 >gi|327438177|dbj|BAK14542.1| predicted GTPase [Solibacillus silvestris StLB046] Length = 366 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 61/127 (48%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A A+YPF T+ PN+G V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGALAANYPFATIEPNVGSVTVPDERLDKLTELVVPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 F DI GI+K A G G+G++FL H + +V E EN+ + +D++ Sbjct: 66 TTFEFTDIAGIVKGASTGEGLGNKFLAHIREVDAICQVVRCFEDENITHVSGTVNPIDDI 125 Query: 263 SAYNSEL 269 N EL Sbjct: 126 EVINLEL 132 >gi|164426131|ref|XP_961549.2| GTP-binding protein 1 [Neurospora crassa OR74A] gi|157071210|gb|EAA32313.2| GTP-binding protein 1 [Neurospora crassa OR74A] Length = 367 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ VT+ K ++A Y FTTL G+++ G E L D+PGII+ Sbjct: 60 ARIALVGFPSVGKSTFLSKVTKTKSEVASYAFTTLTAIPGVLEYGGAEIQLLDLPGIIEG 119 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 120 ASEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA 154 >gi|116199139|ref|XP_001225381.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] gi|88179004|gb|EAQ86472.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] Length = 367 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ VT+ K ++A Y FTTL G+++ G E L D+PGII+ Sbjct: 60 ARIALVGFPSVGKSTFLSKVTKTKSEVASYAFTTLTAIPGVLEYGGAEIQLLDLPGIIEG 119 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 120 ASEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA 154 >gi|317057188|ref|YP_004105655.1| GTP-binding protein YchF [Ruminococcus albus 7] gi|315449457|gb|ADU23021.1| GTP-binding protein YchF [Ruminococcus albus 7] Length = 364 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 +G++GLPN GKST ++T A + A+YPF T+ PN+GIV E Y Sbjct: 3 LGMVGLPNVGKSTLFNALTNAGAESANYPFCTIEPNVGIVSVPDKRLDALAEMYHPVKFT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E++ Sbjct: 63 PATLEFV--DIAGLVKGASKGEGLGNKFLANIREVDAIVHVVRCFEDD 108 >gi|206558793|ref|YP_002229553.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia cenocepacia J2315] gi|198034830|emb|CAR50698.1| putative GTP-binding protein [Burkholderia cenocepacia J2315] Length = 364 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDTRLKALSEIVKPERVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E ENV A +D++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVSPIDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 EVINTEL 132 >gi|167571389|ref|ZP_02364263.1| translation-associated GTPase [Burkholderia oklahomensis C6786] Length = 364 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 75/151 (49%), Gaps = 32/151 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLKALADIIKPERVVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV A LD Sbjct: 66 AVVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVSPLD 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 ++ N+EL L+ + TV+ LAR Sbjct: 124 DIEVINTEL-------ALADLATVEK-ALAR 146 >gi|315652475|ref|ZP_07905460.1| GTP-dependent nucleic acid-binding protein EngD [Eubacterium saburreum DSM 3986] gi|315485264|gb|EFU75661.1| GTP-dependent nucleic acid-binding protein EngD [Eubacterium saburreum DSM 3986] Length = 365 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV---KEGYKEF---------- 208 +GI+GLPN GKST S+T+A A+YPF T+ PN+G+V + KE Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGATAANYPFATIDPNVGVVAVPDDRLKELGKLYNTKKVT 62 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + ++H+V +++ Sbjct: 63 PALIDFVDIAGLVKGASKGEGLGNQFLSNIRECDAIIHVVRCFDDS 108 >gi|148358611|ref|YP_001249818.1| GTP-dependent nucleic acid-binding protein [Legionella pneumophila str. Corby] gi|296108299|ref|YP_003620000.1| GTP binding protein [Legionella pneumophila 2300/99 Alcoy] gi|148280384|gb|ABQ54472.1| GTP-dependent nucleic acid-binding protein [Legionella pneumophila str. Corby] gi|295650201|gb|ADG26048.1| GTP binding protein [Legionella pneumophila 2300/99 Alcoy] Length = 363 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 27/152 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV + + + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVTVPDSRLDNLSDIVKPQQVIH 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS-- 263 DI G++K A G G+G++FL + T + H+V + + + +D LS Sbjct: 66 ATMQFVDIAGLVKGASSGEGLGNQFLANIRETDAIAHVVRCFDNSDVVHVEGRVDPLSDI 125 Query: 264 -AYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 N+EL L+ ++T++ L KN Sbjct: 126 EVINTEL-------ALADMETLEKSLLKVGKN 150 >gi|320335477|ref|YP_004172188.1| GTP-binding protein YchF [Deinococcus maricopensis DSM 21211] gi|319756766|gb|ADV68523.1| GTP-binding protein YchF [Deinococcus maricopensis DSM 21211] Length = 365 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 39/185 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++TRA A+YPF T+ PN G V Sbjct: 6 IGIVGLPNVGKSTLFNAITRAGALAANYPFATIEPNTGRVTVPDERLEALSRVFTKGERV 65 Query: 203 ----EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-NVQAAYQC 257 Y EF+ DI G+++ A +G G+G++FL + + H+V A ++ NV Sbjct: 66 PPIIPTYVEFV--DIAGLVRGASKGEGLGNQFLANIREVDAIAHVVRAFQDPNVVHVAGK 123 Query: 258 I--LDELSAYNSELRKKIEIVGLSQIDTVD--SDTLAR--KKNELATQCGQVPFEFSSIT 311 + + ++ N+EL LS + TV+ +D L + K N+ + ++ E +I Sbjct: 124 VDPVSDIETINTELI-------LSDLATVERRADRLKKSAKGNKDDAELLKLAEELIAIL 176 Query: 312 GHGIP 316 G G P Sbjct: 177 GEGRP 181 >gi|78065087|ref|YP_367856.1| translation-associated GTPase [Burkholderia sp. 383] gi|77965832|gb|ABB07212.1| GTP-binding protein, HSR1-related protein [Burkholderia sp. 383] Length = 364 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDTRLKALSEIVKPERVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E ENV A +D++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVSPIDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 EVINTEL 132 >gi|167564238|ref|ZP_02357154.1| translation-associated GTPase [Burkholderia oklahomensis EO147] Length = 364 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 75/151 (49%), Gaps = 32/151 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLKALADIIKPERVVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV A LD Sbjct: 66 AVVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVSPLD 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 ++ N+EL L+ + TV+ LAR Sbjct: 124 DIEVINTEL-------ALADLATVEK-ALAR 146 >gi|288574497|ref|ZP_06392854.1| GTP-binding protein YchF [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570238|gb|EFC91795.1| GTP-binding protein YchF [Dethiosulfovibrio peptidovorans DSM 11002] Length = 363 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +GI+GLPN GKST ++T A + ++YPF T+ PN+G+V Sbjct: 3 LGIVGLPNVGKSTLFNAITSAGAEASNYPFCTIEPNVGVVSVPDERLSVLSKMFNSAKIT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF DI G+++ A +G G+G+ FL H + ++H+V E++ Sbjct: 63 PATVEFF--DIAGLVRGASKGEGLGNTFLSHIREVNAIVHVVRCFEDD 108 >gi|321453635|gb|EFX64851.1| hypothetical protein DAPPUDRAFT_333762 [Daphnia pulex] Length = 398 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 24/159 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKE---- 207 IGI+GLPN GKSTF +T++ ++PF T+ PN V E YK Sbjct: 24 IGIVGLPNVGKSTFFNILTKSAAPAENFPFCTIDPNENKVAVPDDRFDWLCEHYKPASKV 83 Query: 208 ---FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G++K AH+G G+G+ FL H + H+ E +V+ + D Sbjct: 84 QAYLNIVDIAGLVKGAHEGQGLGNAFLSHIRSVDAIFHLCRTFESEEITHVEGDVNPVRD 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 + N ELR K E L+ I +S L R ++ T+ Sbjct: 144 -IEIINEELRLKDEEYLLATIKKTES--LMRSDKKMKTE 179 >gi|13358160|ref|NP_078434.1| translation-associated GTPase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762114|ref|YP_001752680.1| GTP-dependent nucleic acid-binding protein EngD [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920347|ref|ZP_02931683.1| GTP-binding protein YchF [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508638|ref|ZP_02958138.1| GTP-binding protein YchF [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701790|ref|ZP_02971468.1| GTP-binding protein YchF [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|11280363|pir||G82870 GTP-binding protein UU595 [imported] - Ureaplasma urealyticum gi|6899606|gb|AAF31009.1|AE002158_7 GTP-binding protein [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827691|gb|ACA32953.1| GTP-binding protein YchF [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902774|gb|EDT49063.1| GTP-binding protein YchF [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182676104|gb|EDT88009.1| GTP-binding protein YchF [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701068|gb|EDU19350.1| GTP-binding protein YchF [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 368 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 17/118 (14%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 G++GLPN GKST ++T ++ + A+YPF T+ PN+GIV K Sbjct: 6 GLVGLPNVGKSTLFNTITNSRVEAANYPFATIEPNIGIVNINDPRLKRLASLVVPDKIVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 F DI G++K A QG G+G++FL + + H+V ++ +D LS Sbjct: 66 TTFKFVDIAGLVKGASQGEGLGNQFLNNIRDVDAICHVVRCFDDKSITHVHNKIDALS 123 >gi|303249060|ref|ZP_07335303.1| GTP-binding protein YchF [Desulfovibrio fructosovorans JJ] gi|302489525|gb|EFL49467.1| GTP-binding protein YchF [Desulfovibrio fructosovorans JJ] Length = 368 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN+ +V + + Sbjct: 5 VGIVGLPNVGKSTLFNALTKAQNAQAANYPFCTIEPNVAVVPVPDARLDALAALVNPAQI 64 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL H T V++H+ A E++ Sbjct: 65 VPATVRFTDIAGLVAGASKGEGLGNKFLAHIRETEVIVHVARAFEDD 111 >gi|187250624|ref|YP_001875106.1| GTP-binding protein [Elusimicrobium minutum Pei191] gi|186970784|gb|ACC97769.1| GTP-binding conserved hypothetical protein [Elusimicrobium minutum Pei191] Length = 357 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 18/109 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 +IGI+GLPN GKST ++T A + ++YPF T+ PN+GIV K+ Sbjct: 2 EIGIVGLPNVGKSTLFNALTCAGAEASNYPFCTIEPNVGIVAIPDRRLDRLQQVFGPPKK 61 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 DI GI++ A +G G+G++FL + ++H+V E ENV Sbjct: 62 TPAAIKFVDIAGIVEGASKGEGLGNKFLANIREVDAIIHVVRLFEDENV 110 >gi|288817625|ref|YP_003431972.1| GTP-binding protein [Hydrogenobacter thermophilus TK-6] gi|288787024|dbj|BAI68771.1| GTP-binding protein [Hydrogenobacter thermophilus TK-6] gi|308751223|gb|ADO44706.1| GTP-binding protein YchF [Hydrogenobacter thermophilus TK-6] Length = 365 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 22/108 (20%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKST ++T AK + A+YPF T+ PN+G+V+ Sbjct: 5 VGIVGLPNVGKSTLFNAITESAKAQAANYPFCTIEPNVGVVEVPDRRLYEIARLERSKKI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + EF+ DI G+++NA QG G+G++FL H + ++ E+ Sbjct: 65 TPTFIEFV--DIAGLVRNASQGEGLGNQFLAHIREVDAIAMVLRCFED 110 >gi|160934893|ref|ZP_02082279.1| hypothetical protein CLOLEP_03768 [Clostridium leptum DSM 753] gi|156866346|gb|EDO59718.1| hypothetical protein CLOLEP_03768 [Clostridium leptum DSM 753] Length = 364 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 +GI+GLPN GKST ++T A + A+YPF T+ PN+G+V E Y Sbjct: 3 LGIVGLPNVGKSTLFNAITNAGAQSANYPFCTIEPNVGVVAVPDPRLDKLAELYHPVKVT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E + Sbjct: 63 PAVIEFV--DIAGLVKGASKGEGLGNKFLSNIREVDAIVHVVRCFEND 108 >gi|48477924|ref|YP_023630.1| translation-associated GTPase [Picrophilus torridus DSM 9790] gi|48430572|gb|AAT43437.1| GTP-binding protein [Picrophilus torridus DSM 9790] Length = 371 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI+G PNAGKST +++T+ IADYPFTT+ PN+GI +EG Sbjct: 4 IGIVGKPNAGKSTLFSAITQIDVDIADYPFTTIKPNVGISYIKSKCPHTEINVQCNPREG 63 Query: 205 -------YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 Y + D+PG+I+ A +G G+G++FL + + +++++ A Sbjct: 64 KCIDGTRYIPVEIIDVPGLIEGASEGKGMGNQFLDNIRDSDIIINLFDA 112 >gi|300871471|ref|YP_003786344.1| translation associated GTPase [Brachyspira pilosicoli 95/1000] gi|300689172|gb|ADK31843.1| translation associated GTPase [Brachyspira pilosicoli 95/1000] Length = 366 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN--LGIVKEG--------------- 204 IGI+GLPN GKST ++T A + A+YPF T+ N I+K+ Sbjct: 5 IGIVGLPNVGKSTLFNALTNAHAEAANYPFCTIDKNEATAIIKDERVDKLANLFKSKKKV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y DI G++K A +G G+G++FL H + +LH+V E+ Sbjct: 65 YNTTTFVDIAGLVKGASKGEGLGNKFLSHIREVNAVLHVVRVFED 109 >gi|323487701|ref|ZP_08092959.1| GTP-dependent nucleic acid-binding protein EngD [Planococcus donghaensis MPA1U2] gi|323398435|gb|EGA91223.1| GTP-dependent nucleic acid-binding protein EngD [Planococcus donghaensis MPA1U2] Length = 366 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFCTIDPNVGIVEVPDERLDKLTELVDPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI++ A +G G+G++FL H + +V ++ Sbjct: 66 TAFEFTDIAGIVEGASKGEGLGNKFLSHIREVDAICQVVRCFADD 110 >gi|163858314|ref|YP_001632612.1| GTP-dependent nucleic acid-binding protein EngD [Bordetella petrii DSM 12804] gi|163262042|emb|CAP44344.1| putative GTP binding protein [Bordetella petrii] Length = 363 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++TRA +YPF T+ PN+G+V+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLQKLAEIVGPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++ A QG G+G++FL H T ++++V E+ Sbjct: 66 ATVEFVDIAGLVAGASQGEGLGNQFLSHIRETDAIVNVVRCFED 109 >gi|83720307|ref|YP_443427.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia thailandensis E264] gi|167620566|ref|ZP_02389197.1| translation-associated GTPase [Burkholderia thailandensis Bt4] gi|257137794|ref|ZP_05586056.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia thailandensis E264] gi|83654132|gb|ABC38195.1| GTP-binding protein YchF [Burkholderia thailandensis E264] Length = 364 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 75/151 (49%), Gaps = 32/151 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLKALADIIKPERVVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV A LD Sbjct: 66 AVVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVSPLD 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 ++ N+EL L+ + TV+ LAR Sbjct: 124 DIEVINTEL-------ALADLGTVEK-ALAR 146 >gi|167749979|ref|ZP_02422106.1| hypothetical protein EUBSIR_00947 [Eubacterium siraeum DSM 15702] gi|167657000|gb|EDS01130.1| hypothetical protein EUBSIR_00947 [Eubacterium siraeum DSM 15702] Length = 364 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK---------------EGYK 206 +G++GLPN GKST ++T A + A+YPF T+ PN+GIV E + Sbjct: 3 LGMVGLPNVGKSTLFNALTNAGAESANYPFCTIEPNVGIVSVPDERLDALAKMYNPEKFT 62 Query: 207 EFIL--ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 L DI G++K A +G G+G++FL + ++H+V E++ Sbjct: 63 PATLEFVDIAGLVKGASKGEGLGNKFLSNIREVDAIVHVVRCFEDD 108 >gi|167582475|ref|ZP_02375349.1| translation-associated GTPase [Burkholderia thailandensis TXDOH] Length = 364 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 75/151 (49%), Gaps = 32/151 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLKALADIIKPERVVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV A LD Sbjct: 66 AVVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVAGKVSPLD 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 ++ N+EL L+ + TV+ LAR Sbjct: 124 DIEVINTEL-------ALADLGTVEK-ALAR 146 >gi|291295589|ref|YP_003506987.1| GTP-binding protein YchF [Meiothermus ruber DSM 1279] gi|290470548|gb|ADD27967.1| GTP-binding protein YchF [Meiothermus ruber DSM 1279] Length = 372 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 28/134 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +GI+GLPN GKST ++T+A A+YPF T+ N+G+V Sbjct: 6 VGIVGLPNVGKSTLFNAITKAGALAANYPFATIDKNVGVVTLPDPRLNALQKLFIKGERV 65 Query: 203 ----EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-NVQAAYQC 257 + EF+ DI G++K AH+G G+G++FL + + H+V E+ NV Sbjct: 66 PPIVPTHVEFV--DIAGLVKGAHKGEGLGNQFLANIREVAAIAHVVRCFEDPNVVHVAGK 123 Query: 258 I--LDELSAYNSEL 269 + LD+L N+EL Sbjct: 124 VDPLDDLETINTEL 137 >gi|296127386|ref|YP_003634638.1| GTP-binding protein YchF [Brachyspira murdochii DSM 12563] gi|296019202|gb|ADG72439.1| GTP-binding protein YchF [Brachyspira murdochii DSM 12563] Length = 366 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN--LGIVKEG--------------- 204 IGI+GLPN GKST ++T A + A+YPF T+ N I+K+ Sbjct: 5 IGIVGLPNVGKSTLFNALTNAHAEAANYPFCTIDKNEATAIIKDERVDKLAALFKSKKKV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y DI G++K A +G G+G++FL H + +LH+V E+ Sbjct: 65 YNTTTFVDIAGLVKGASKGEGLGNKFLSHIREVNAVLHVVRVFED 109 >gi|91775028|ref|YP_544784.1| translation-associated GTPase [Methylobacillus flagellatus KT] gi|91709015|gb|ABE48943.1| conserved hypothetical protein [Methylobacillus flagellatus KT] Length = 361 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 32/152 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VKE 203 GI+GLPN GKST ++TRA + A+YPF T+ PN+GI V+ Sbjct: 4 GIVGLPNVGKSTLFNAITRAGIEAANYPFCTIEPNVGIVEVPDPRLKPLIEIVNPQKVQP 63 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILD 260 EF+ DI G++ A +G G+G++FL + T + H+V ++ V A + L Sbjct: 64 AIVEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFDDGNIVHVAGKVDPLA 121 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 ++ N+EL L+ ++TV+ TL R+ Sbjct: 122 DVETINTEL-------ALADMETVEK-TLQRE 145 >gi|296121912|ref|YP_003629690.1| GTP-binding protein YchF [Planctomyces limnophilus DSM 3776] gi|296014252|gb|ADG67491.1| GTP-binding protein YchF [Planctomyces limnophilus DSM 3776] Length = 363 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVK------EGYKEFI------ 209 GI+GLPN GKST ++T +K + A+YPF T+ PN GIV E +FI Sbjct: 4 GIVGLPNVGKSTLFNALTCSKAAQSANYPFCTIEPNEGIVSVPDSRLERITKFIPPQKVI 63 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 L DI GI+K A +G G+G++FL H +L +V E+ Sbjct: 64 PAALKLVDIAGIVKGASEGQGLGNKFLSHIREVDAILQVVRCFED 108 >gi|37522802|ref|NP_926179.1| GTP-dependent nucleic acid-binding protein EngD [Gloeobacter violaceus PCC 7421] gi|35213804|dbj|BAC91174.1| gll3233 [Gloeobacter violaceus PCC 7421] Length = 364 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 57/104 (54%), Gaps = 18/104 (17%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 GI+GLPN GKST F A V AK + A++PF T+ PN G+V + ILA Sbjct: 5 GIVGLPNVGKSTLFNALVENAKAQAANFPFCTIEPNTGVVNVPDERLGILARIVSTSTII 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 DI G+++ A QG G+G++FL H + L+H+V E Sbjct: 65 PARIEYVDIAGLVRGASQGEGLGNQFLSHIRQVDALVHVVRCFE 108 >gi|209878478|ref|XP_002140680.1| hypothetical protein [Cryptosporidium muris RN66] gi|209556286|gb|EEA06331.1| hypothetical protein, conserved [Cryptosporidium muris RN66] Length = 451 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 24/107 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------------------- 200 IG +G P++GKSTF S T + KI +YPFTT+ PN+GI Sbjct: 9 IGCVGKPSSGKSTFFNSATDSTAKIGNYPFTTIEPNVGITYYTTKCPCKTYNVKCKPNYG 68 Query: 201 -VKEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 K+G Y + DI G+I A+QG G+G++FL VLLHI+ Sbjct: 69 MCKDGRRYIPIKILDIAGLIPGAYQGNGLGNKFLDDLRHADVLLHII 115 >gi|225620019|ref|YP_002721276.1| translation-associated GTPase [Brachyspira hyodysenteriae WA1] gi|225214838|gb|ACN83572.1| translation-associated GTPase [Brachyspira hyodysenteriae WA1] Length = 366 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN--LGIVKEG--------------- 204 IGI+GLPN GKST ++T A + A+YPF T+ N I+K+ Sbjct: 5 IGIVGLPNVGKSTLFNALTNAHAEAANYPFCTIDKNEATAIIKDERVDKLAELFKSKKKV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y DI G++K A +G G+G++FL H + +LH+V E+ Sbjct: 65 YNTTTFVDIAGLVKGASKGEGLGNKFLSHIREVNAVLHVVRVFED 109 >gi|225389948|ref|ZP_03759672.1| hypothetical protein CLOSTASPAR_03698 [Clostridium asparagiforme DSM 15981] gi|225043987|gb|EEG54233.1| hypothetical protein CLOSTASPAR_03698 [Clostridium asparagiforme DSM 15981] Length = 365 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 21/107 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------K 202 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVPVPDARLDKLTAMYDSAKTT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL + ++H+V ++ Sbjct: 63 PAVIEFV--DIAGLVKGASKGEGLGNQFLSNIREVDAIVHVVRCFDD 107 >gi|89100935|ref|ZP_01173782.1| YyaF [Bacillus sp. NRRL B-14911] gi|89084344|gb|EAR63498.1| YyaF [Bacillus sp. NRRL B-14911] Length = 366 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGIVEVPDHRLNKLTELVQPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI GI+K A +G G+G++FL H + +V ++ Sbjct: 66 TTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRCFADD 110 >gi|331002919|ref|ZP_08326432.1| GTP-binding protein YchF [Lachnospiraceae oral taxon 107 str. F0167] gi|330413212|gb|EGG92586.1| GTP-binding protein YchF [Lachnospiraceae oral taxon 107 str. F0167] Length = 365 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------KEGYKEF------ 208 +GI+GLPN GKST S+T+A A+YPF T+ PN+G+V KE K + Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGATAANYPFATIDPNVGVVAVPDNRLKELGKLYNTKKVT 62 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + ++H+V +++ Sbjct: 63 PAIIDFVDIAGLVKGASKGEGLGNQFLSNIRECDAIIHVVRCFDDS 108 >gi|270159181|ref|ZP_06187837.1| GTP-dependent nucleic acid-binding protein engD [Legionella longbeachae D-4968] gi|289165991|ref|YP_003456129.1| GTP-binding protein [Legionella longbeachae NSW150] gi|269987520|gb|EEZ93775.1| GTP-dependent nucleic acid-binding protein engD [Legionella longbeachae D-4968] gi|288859164|emb|CBJ13093.1| putative GTP-binding protein [Legionella longbeachae NSW150] Length = 363 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 29/153 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV + + + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVTVPDPRLDALSKIVNPQQVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDE 261 DI GI+K A +G G+G++FL + T + H+V E +V+ + D Sbjct: 66 ATMQFVDIAGIVKGASKGEGLGNQFLANIRETDAIAHVVRCFENTDVVHVEGHVHPLSD- 124 Query: 262 LSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 + N+EL L+ ++T++ L KN Sbjct: 125 IEVINTEL-------ALADMETLEKALLKAGKN 150 >gi|228470987|ref|ZP_04055832.1| GTP-binding protein YchF [Porphyromonas uenonis 60-3] gi|228307384|gb|EEK16398.1| GTP-binding protein YchF [Porphyromonas uenonis 60-3] Length = 367 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK---EGYKEFI---------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNVGVITVPDERLNKLVEMEHPKRTVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A QG G+G++FL + T ++H++ +++ Sbjct: 66 ATVEIVDIAGLVKGASQGEGLGNKFLSNIRETDAIIHLLRCFDDD 110 >gi|160935721|ref|ZP_02083096.1| hypothetical protein CLOBOL_00611 [Clostridium bolteae ATCC BAA-613] gi|158441465|gb|EDP19175.1| hypothetical protein CLOBOL_00611 [Clostridium bolteae ATCC BAA-613] Length = 365 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 21/107 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------K 202 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVPVPDVRLDKLTAMYNSEKTT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL + ++H+V ++ Sbjct: 63 PAVIEFV--DIAGLVKGASKGEGLGNQFLSNIREVDAIVHVVRCFDD 107 >gi|325846723|ref|ZP_08169638.1| GTP-binding protein YchF [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481481|gb|EGC84522.1| GTP-binding protein YchF [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 365 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 24/166 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 +GI+GLPN GKST ++T+A +IA+YPF T+ PN+G+V K+ + Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAEIANYPFCTIDPNVGLVNVPDSRVDYLAKMHNSKKVV 62 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-NVQAAYQCI--LDE 261 A DI G++K A +G G+G++FL + T ++ ++ + NV I L + Sbjct: 63 PAAIEFYDIAGLVKGASKGEGLGNKFLSNIRETDAIVEVLRCFNDPNVTHVDGKIDPLRD 122 Query: 262 LSAYNSEL----RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQV 303 + N EL + +E V + + SD AR + EL + +V Sbjct: 123 IETINFELILSDLELVEKVLVKREKVAKSDKSARSEVELLKRIKEV 168 >gi|160946373|ref|ZP_02093582.1| hypothetical protein PEPMIC_00333 [Parvimonas micra ATCC 33270] gi|158447489|gb|EDP24484.1| hypothetical protein PEPMIC_00333 [Parvimonas micra ATCC 33270] Length = 364 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY--KEFI 209 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V E Y K+ I Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAESANYPFCTIDPNVGLVNVPDERLHKLTELYNSKKTI 62 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI G++K A +G G+G++FL H ++ ++ E+ Sbjct: 63 PAVIEFYDIAGLVKGASKGEGLGNKFLSHIREVDAIVEVIRCFED 107 >gi|39938669|ref|NP_950435.1| GTP-dependent nucleic acid-binding protein EngD [Onion yellows phytoplasma OY-M] gi|39721778|dbj|BAD04268.1| conserved hypothetical protein [Onion yellows phytoplasma OY-M] Length = 363 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 41/189 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +GIIGLPN GKST ++T+ + A+YPF T+ PN+GIV+ Sbjct: 3 VGIIGLPNVGKSTLFNALTKMQVLEANYPFATIEPNVGIVEVSDSRLQTLSQIFQSQKTI 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 EF DI G++ A +G G+G++FL H + H+V +C D Sbjct: 63 SALIEF--KDIAGLVAGASKGEGLGNQFLSHIRNVDAICHVV-----------KCFEDPN 109 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSD---------TLARKKNELATQCGQVPFEFSSITGH 313 A+ +E +E + + Q + +D L ++KN+L + Q + I H Sbjct: 110 IAHVTETNNPVEEIDIIQTELALADLEQIEKRLLKLGKQKNKLDKELLQEKALLTKIKTH 169 Query: 314 GIPQILECL 322 Q L+ L Sbjct: 170 LTTQDLKNL 178 >gi|46121521|ref|XP_385315.1| hypothetical protein FG05139.1 [Gibberella zeae PH-1] Length = 371 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 59/95 (62%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ VT+ + ++A Y FTTL G+++ G E L D+PGII+ Sbjct: 65 ARIALVGFPSVGKSTFLSKVTKTRSEVASYAFTTLTAIPGVLEYGGAEIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A ++ Q A Sbjct: 125 ASEGKGRGRQVISAAKTSDLILMVLDATKKAEQRA 159 >gi|313886391|ref|ZP_07820114.1| GTP-binding protein YchF [Porphyromonas asaccharolytica PR426713P-I] gi|332300166|ref|YP_004442087.1| GTP-binding protein YchF [Porphyromonas asaccharolytica DSM 20707] gi|312924167|gb|EFR34953.1| GTP-binding protein YchF [Porphyromonas asaccharolytica PR426713P-I] gi|332177229|gb|AEE12919.1| GTP-binding protein YchF [Porphyromonas asaccharolytica DSM 20707] Length = 367 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK---EGYKEFI---------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNVGVITVPDERLNKLVEMEHPKRTVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A QG G+G++FL + T ++H++ +++ Sbjct: 66 ATVEIVDIAGLVKGASQGEGLGNKFLSNIRETDAIIHLLRCFDDD 110 >gi|242310527|ref|ZP_04809682.1| translation-associated GTPase [Helicobacter pullorum MIT 98-5489] gi|239522925|gb|EEQ62791.1| translation-associated GTPase [Helicobacter pullorum MIT 98-5489] Length = 367 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 35/169 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV------------------- 201 IGI+GLPN GKST ++T+ + + A+YPF T+ PN +V Sbjct: 5 IGIVGLPNVGKSTTFNALTKTQNAQAANYPFCTIEPNKAVVPVPDTRLQELAKIVNPERI 64 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDE 261 + EF+ DI G++K A +G G+G++FL + T V+LHIV E++ + +D Sbjct: 65 QNSVVEFV--DIAGLVKGASKGEGLGNQFLANIRETEVILHIVRCFEDSNITHVEGSIDP 122 Query: 262 LS-----------AYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L A L+K++E L+++ +D A+K E+A + Sbjct: 123 LRDVEIIETELLIADMQTLQKRVE--KLTRMAKSGTDKEAKKTLEVAQE 169 >gi|224023507|ref|ZP_03641873.1| hypothetical protein BACCOPRO_00209 [Bacteroides coprophilus DSM 18228] gi|224016729|gb|EEF74741.1| hypothetical protein BACCOPRO_00209 [Bacteroides coprophilus DSM 18228] Length = 367 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDDRLNKLAELVIPDRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T +LH++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAILHVLRCFDDD 110 >gi|86130668|ref|ZP_01049268.1| GTP-dependent nucleic acid-binding protein [Dokdonia donghaensis MED134] gi|85819343|gb|EAQ40502.1| GTP-dependent nucleic acid-binding protein [Dokdonia donghaensis MED134] Length = 364 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A+YPF T+ PN+G+V +E + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANYPFCTIEPNVGVVNVPDNRLAKLEELVSPERVIP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T +LH++ + + Sbjct: 64 ATVEIVDIAGLVKGASKGEGLGNQFLGNIRETDAILHVLRCFDND 108 >gi|325268334|ref|ZP_08134967.1| GTP-dependent nucleic acid-binding protein EngD [Prevotella multiformis DSM 16608] gi|324989476|gb|EGC21426.1| GTP-dependent nucleic acid-binding protein EngD [Prevotella multiformis DSM 16608] Length = 367 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIEPNLGVITVPDERLNKLAEIVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + ++H+V E++ Sbjct: 66 ATCEIVDIAGLVKGASKGEGLGNKFLGNIRECDAIIHVVRCFEDD 110 >gi|193213388|ref|YP_001999341.1| GTP-dependent nucleic acid-binding protein EngD [Chlorobaculum parvum NCIB 8327] gi|193086865|gb|ACF12141.1| GTP-binding protein YchF [Chlorobaculum parvum NCIB 8327] Length = 363 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 34/160 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE--------------- 207 GI+GLPN GKST ++T + + A+YPF T+ PN+G V K Sbjct: 6 GIVGLPNVGKSTLFNAITAKQAEAANYPFCTIEPNVGTVLVPDKRLGELASVVKTPVIVP 65 Query: 208 --FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILDE 261 + DI G++K A +G G+G++FL H ++H+V E++ V+ + D+ Sbjct: 66 AVLEIVDIAGLVKGASKGEGLGNQFLSHIREVDAIIHVVRCFEDSDIVHVEGKIDPV-DD 124 Query: 262 LSAYNSELRKKIEIVGLSQIDTVDS--DTL---ARKKNEL 296 ++ +EL L+ +D+++ D L ARK+ EL Sbjct: 125 IATIETELM-------LADLDSMEKRMDKLRKNARKEKEL 157 >gi|296082781|emb|CBI21786.3| unnamed protein product [Vitis vinifera] Length = 370 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST F A V K + A++PF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVAVPDPRLHVLSDISKSQRVV 65 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QG G+G++FL H +L +V E+N Sbjct: 66 PASIEFV--DIAGLVKGASQGEGLGNKFLSHIREVDSILQVVRCFEDN 111 >gi|255038521|ref|YP_003089142.1| GTP-dependent nucleic acid-binding protein EngD [Dyadobacter fermentans DSM 18053] gi|254951277|gb|ACT95977.1| GTP-binding protein YchF [Dyadobacter fermentans DSM 18053] Length = 366 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST +++ K + A+YPF T+ PN+G+V Sbjct: 6 GIVGLPNVGKSTLFNAISTGKAEAANYPFCTIEPNVGVVTVPDERLDVLTKLVNPQKVIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QGAG+G++FL + ++H+V ++ Sbjct: 66 TIIEFV--DIAGLVKGASQGAGLGNKFLANIREVDAIVHVVRCFADD 110 >gi|325859772|ref|ZP_08172902.1| GTP-binding protein YchF [Prevotella denticola CRIS 18C-A] gi|327312786|ref|YP_004328223.1| GTP-binding protein YchF [Prevotella denticola F0289] gi|325482698|gb|EGC85701.1| GTP-binding protein YchF [Prevotella denticola CRIS 18C-A] gi|326944642|gb|AEA20527.1| GTP-binding protein YchF [Prevotella denticola F0289] Length = 367 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIEPNLGVITVPDERLNKLAEIVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + ++H+V E++ Sbjct: 66 ATCEIVDIAGLVKGASKGEGLGNKFLGNIRECDAIIHVVRCFEDD 110 >gi|189460219|ref|ZP_03009004.1| hypothetical protein BACCOP_00856 [Bacteroides coprocola DSM 17136] gi|189433080|gb|EDV02065.1| hypothetical protein BACCOP_00856 [Bacteroides coprocola DSM 17136] Length = 367 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLNKLAELVIPDRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 + DI G++K A +G G+G++FL + T +LH++ +ENV Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAILHVLRCFDDENV 112 >gi|224418445|ref|ZP_03656451.1| translation-associated GTPase [Helicobacter canadensis MIT 98-5491] gi|253827761|ref|ZP_04870646.1| putative translation factor GTPase [Helicobacter canadensis MIT 98-5491] gi|313141976|ref|ZP_07804169.1| translation-associated GTPase [Helicobacter canadensis MIT 98-5491] gi|253511167|gb|EES89826.1| putative translation factor GTPase [Helicobacter canadensis MIT 98-5491] gi|313131007|gb|EFR48624.1| translation-associated GTPase [Helicobacter canadensis MIT 98-5491] Length = 367 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV------------------- 201 IGI+GLPN GKST ++T+ + + A+YPF T+ PN IV Sbjct: 5 IGIVGLPNVGKSTTFNALTKTQNAQAANYPFCTIEPNKAIVPVPDKRLQELAKIVNPERI 64 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + EF+ DI G++K A +G G+G++FL + T V+LHIV E++ Sbjct: 65 QHSVVEFV--DIAGLVKGASKGEGLGNQFLANIRETEVILHIVRCFEDS 111 >gi|283851665|ref|ZP_06368944.1| GTP-binding protein YchF [Desulfovibrio sp. FW1012B] gi|283572995|gb|EFC20976.1| GTP-binding protein YchF [Desulfovibrio sp. FW1012B] Length = 368 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN+ IV + + Sbjct: 5 VGIVGLPNVGKSTLFNALTKAQNAQAANYPFCTIEPNVAIVPVPDARLDALAGLVDPDQI 64 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL H T V++H+ A E++ Sbjct: 65 VPATVRFTDIAGLVAGASKGEGLGNKFLAHIRETEVIVHVARAFEDD 111 >gi|303230338|ref|ZP_07317099.1| GTP-binding protein YchF [Veillonella atypica ACS-049-V-Sch6] gi|302514877|gb|EFL56858.1| GTP-binding protein YchF [Veillonella atypica ACS-049-V-Sch6] Length = 385 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 17/106 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEF 208 ++GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V G K Sbjct: 23 EVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVDVPDNRLAVLAEMFGSKRI 82 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + A DI G+++ A +G G+G++FL H + + ++ ++ Sbjct: 83 LPAAMRFVDIAGLVEGASKGEGLGNKFLSHIRQVDAIAQVIRCFDD 128 >gi|294794935|ref|ZP_06760070.1| GTP-binding protein YchF [Veillonella sp. 3_1_44] gi|294454297|gb|EFG22671.1| GTP-binding protein YchF [Veillonella sp. 3_1_44] Length = 368 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 17/106 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEF 208 ++GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V G K Sbjct: 6 EVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVDVPDNRLAVLAEMFGSKRI 65 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + A DI G+++ A +G G+G++FL H + + ++ ++ Sbjct: 66 LPAAMRFVDIAGLVEGASKGEGLGNKFLSHIRQVDAIAQVIRCFDD 111 >gi|282849208|ref|ZP_06258593.1| GTP-binding protein YchF [Veillonella parvula ATCC 17745] gi|282580912|gb|EFB86310.1| GTP-binding protein YchF [Veillonella parvula ATCC 17745] Length = 368 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 17/106 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEF 208 ++GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V G K Sbjct: 6 EVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVDVPDNRLAVLAEMFGSKRI 65 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + A DI G+++ A +G G+G++FL H + + ++ ++ Sbjct: 66 LPAAMRFVDIAGLVEGASKGEGLGNKFLSHIRQVDAIAQVIRCFDD 111 >gi|332827781|gb|EGK00516.1| GTP-binding protein YchF [Dysgonomonas gadei ATCC BAA-286] Length = 367 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNVGVITVPDERLNKLSELVKPNRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T +LH++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAILHVLRCFDDD 110 >gi|294793025|ref|ZP_06758171.1| GTP-binding protein YchF [Veillonella sp. 6_1_27] gi|294455970|gb|EFG24334.1| GTP-binding protein YchF [Veillonella sp. 6_1_27] Length = 368 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 17/106 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEF 208 ++GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V G K Sbjct: 6 EVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVDVPDNRLAVLAEMFGSKRI 65 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + A DI G+++ A +G G+G++FL H + + ++ ++ Sbjct: 66 LPAAMRFVDIAGLVEGASKGEGLGNKFLSHIRQVDAIAQVIRCFDD 111 >gi|238020001|ref|ZP_04600427.1| hypothetical protein VEIDISOL_01877 [Veillonella dispar ATCC 17748] gi|237863525|gb|EEP64815.1| hypothetical protein VEIDISOL_01877 [Veillonella dispar ATCC 17748] Length = 397 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 17/106 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEF 208 ++GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V G K Sbjct: 35 EVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVDVPDNRLAVLAEMFGSKRI 94 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + A DI G+++ A +G G+G++FL H + + ++ ++ Sbjct: 95 LPAAMRFVDIAGLVEGASKGEGLGNKFLSHIRQVDAIAQVIRCFDD 140 >gi|212692550|ref|ZP_03300678.1| hypothetical protein BACDOR_02047 [Bacteroides dorei DSM 17855] gi|237709132|ref|ZP_04539613.1| translation-associated GTPase [Bacteroides sp. 9_1_42FAA] gi|237724386|ref|ZP_04554867.1| translation-associated GTPase [Bacteroides sp. D4] gi|265752659|ref|ZP_06088228.1| GTP-binding protein YchF [Bacteroides sp. 3_1_33FAA] gi|212664835|gb|EEB25407.1| hypothetical protein BACDOR_02047 [Bacteroides dorei DSM 17855] gi|229437255|gb|EEO47332.1| translation-associated GTPase [Bacteroides dorei 5_1_36/D4] gi|229456828|gb|EEO62549.1| translation-associated GTPase [Bacteroides sp. 9_1_42FAA] gi|263235845|gb|EEZ21340.1| GTP-binding protein YchF [Bacteroides sp. 3_1_33FAA] Length = 367 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLTKLAELVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 + DI G++K A +G G+G++FL + T +LH++ +ENV Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAILHVLRCFDDENV 112 >gi|157415187|ref|YP_001482443.1| translation-associated GTPase [Campylobacter jejuni subsp. jejuni 81116] gi|157386151|gb|ABV52466.1| GTP-binding protein YchF [Campylobacter jejuni subsp. jejuni 81116] gi|307747828|gb|ADN91098.1| GTP-dependent nucleic acid-binding protein engD [Campylobacter jejuni subsp. jejuni M1] gi|315932498|gb|EFV11437.1| GTP-dependent nucleic acid-binding protein engD [Campylobacter jejuni subsp. jejuni 327] Length = 367 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN +V+ Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAMVEVPDLRLNELAKIVKPEKI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL + T V+LHIV EEN+ Sbjct: 65 MHSLIEFV--DIAGLVKGASKGEGLGNKFLSNIRETEVILHIVRCFDEENI 113 >gi|154175179|ref|YP_001407931.1| GTP-dependent nucleic acid-binding protein EngD [Campylobacter curvus 525.92] gi|112802132|gb|EAT99476.1| GTP-binding protein YchF [Campylobacter curvus 525.92] Length = 367 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 19/109 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-----------------KE 203 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN +V + Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAESANYPFCTIEPNKAVVPVPDKRLGELAKIVNPNRI 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 Y DI G++K A G G+G++FL + T V+LHIV E EN+ Sbjct: 65 QYSTIEFVDIAGLVKGASGGEGLGNKFLSNIRETEVILHIVRCFEDENI 113 >gi|303228726|ref|ZP_07315546.1| GTP-binding protein YchF [Veillonella atypica ACS-134-V-Col7a] gi|302516600|gb|EFL58522.1| GTP-binding protein YchF [Veillonella atypica ACS-134-V-Col7a] Length = 384 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 17/106 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEF 208 ++GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V G K Sbjct: 22 EVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVDVPDSRLAVLAEMFGSKRI 81 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + A DI G+++ A +G G+G++FL H + + ++ ++ Sbjct: 82 LPAAMRFVDIAGLVEGASKGEGLGNKFLSHIRQVDAIAQVIRCFDD 127 >gi|283956273|ref|ZP_06373753.1| GTP-binding protein YchF [Campylobacter jejuni subsp. jejuni 1336] gi|283791993|gb|EFC30782.1| GTP-binding protein YchF [Campylobacter jejuni subsp. jejuni 1336] Length = 367 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN +V+ Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAMVEVPDLRLNELAKIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL + T V+LHIV EEN+ Sbjct: 65 IHSLIEFV--DIAGLVKGASKGEGLGNKFLSNIRETEVILHIVRCFDEENI 113 >gi|150003773|ref|YP_001298517.1| GTP-dependent nucleic acid-binding protein EngD [Bacteroides vulgatus ATCC 8482] gi|294777404|ref|ZP_06742855.1| GTP-binding protein YchF [Bacteroides vulgatus PC510] gi|149932197|gb|ABR38895.1| GTP-binding protein [Bacteroides vulgatus ATCC 8482] gi|294448472|gb|EFG17021.1| GTP-binding protein YchF [Bacteroides vulgatus PC510] Length = 367 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLTKLAELVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 + DI G++K A +G G+G++FL + T +LH++ +ENV Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAILHVLRCFDDENV 112 >gi|86150628|ref|ZP_01068850.1| GTP-binding protein YchF [Campylobacter jejuni subsp. jejuni CF93-6] gi|148926611|ref|ZP_01810293.1| putative GTP-binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|85838889|gb|EAQ56156.1| GTP-binding protein YchF [Campylobacter jejuni subsp. jejuni CF93-6] gi|145845305|gb|EDK22399.1| putative GTP-binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|284926163|gb|ADC28515.1| GTP-dependent nucleic acid-binding protein EngD [Campylobacter jejuni subsp. jejuni IA3902] gi|315058369|gb|ADT72698.1| GTP-binding and nucleic acid-binding protein YchF [Campylobacter jejuni subsp. jejuni S3] Length = 367 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN +V+ Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAMVEVPDLRLNELAKIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL + T V+LHIV EEN+ Sbjct: 65 MHSLIEFV--DIAGLVKGASKGEGLGNKFLSNIRETEVILHIVRCFDEENI 113 >gi|257066539|ref|YP_003152795.1| GTP-binding protein YchF [Anaerococcus prevotii DSM 20548] gi|256798419|gb|ACV29074.1| GTP-binding protein YchF [Anaerococcus prevotii DSM 20548] Length = 365 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 +GI+GLPN GKST ++T+A IA+YPF T+ PN+G+V K+ + Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGALIANYPFATIDPNVGLVNVPDQRLEVLSEMSSSKKIV 62 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI G++K A +G G+G++FL + T ++ ++ ++ Sbjct: 63 PAVVEFYDIAGLVKGASKGEGLGNKFLSNIRETEAIVEVLRCFDD 107 >gi|198274099|ref|ZP_03206631.1| hypothetical protein BACPLE_00236 [Bacteroides plebeius DSM 17135] gi|198273177|gb|EDY97446.1| hypothetical protein BACPLE_00236 [Bacteroides plebeius DSM 17135] Length = 367 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDDRLNKLAELVEPDRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 + DI G++K A +G G+G++FL + T +LH++ +ENV Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAILHVLRCFDDENV 112 >gi|88596645|ref|ZP_01099882.1| GTP-binding protein YchF [Campylobacter jejuni subsp. jejuni 84-25] gi|218562549|ref|YP_002344328.1| GTP-dependent nucleic acid-binding protein EngD [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|88191486|gb|EAQ95458.1| GTP-binding protein YchF [Campylobacter jejuni subsp. jejuni 84-25] gi|112360255|emb|CAL35050.1| putative GTP-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315927520|gb|EFV06853.1| GTP-dependent nucleic acid-binding protein engD [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929497|gb|EFV08692.1| GTP-dependent nucleic acid-binding protein engD [Campylobacter jejuni subsp. jejuni 305] Length = 367 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN +V+ Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAMVEVPDLRLNELAKIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL + T V+LHIV EEN+ Sbjct: 65 MHSLIEFV--DIAGLVKGASKGEGLGNKFLSNIRETEVILHIVRCFDEENI 113 >gi|57504988|ref|ZP_00370940.1| GTP-binding protein YchF [Campylobacter coli RM2228] gi|305432012|ref|ZP_07401179.1| GTP-binding protein YchF [Campylobacter coli JV20] gi|57019260|gb|EAL55966.1| GTP-binding protein YchF [Campylobacter coli RM2228] gi|304445096|gb|EFM37742.1| GTP-binding protein YchF [Campylobacter coli JV20] Length = 367 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN +V+ Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAMVEVPDLRLNELAKIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL + T V+LHIV EEN+ Sbjct: 65 MHSLIEFV--DIAGLVKGASKGEGLGNKFLSNIRETEVILHIVRCFDEENI 113 >gi|302831940|ref|XP_002947535.1| hypothetical protein VOLCADRAFT_57264 [Volvox carteri f. nagariensis] gi|300267399|gb|EFJ51583.1| hypothetical protein VOLCADRAFT_57264 [Volvox carteri f. nagariensis] Length = 366 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 21/128 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V K + A++PF T+ PN+GIV+ G KE I Sbjct: 4 GIVGLPNVGKSTLFNALVENGKAQAANFPFCTIEPNVGIVQVEDPRLKELSGISGSKEII 63 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDE 261 A DI G++K A +G G+G++FL + T + +V E++ + A + LD+ Sbjct: 64 PATVEFVDIAGLVKGASKGEGMGNQFLTNIRNTDAICQVVRCFEDDDIIHVAGKVDPLDD 123 Query: 262 LSAYNSEL 269 + N EL Sbjct: 124 IDVINLEL 131 >gi|254491255|ref|ZP_05104436.1| GTP-binding protein YchF [Methylophaga thiooxidans DMS010] gi|224463768|gb|EEF80036.1| GTP-binding protein YchF [Methylophaga thiooxydans DMS010] Length = 363 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 24/129 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T A +YPF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTEAGIDAQNYPFCTIEPNVGIVPVPDPRMDKLAAIVSPERVMP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILD 260 EF+ DI G+++ A +G G+G++FL + T + H+V E ENV A LD Sbjct: 66 TTMEFV--DIAGLVEGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVVHVAGKVSPLD 123 Query: 261 ELSAYNSEL 269 ++ N+EL Sbjct: 124 DIEVINTEL 132 >gi|255513799|gb|EET90064.1| GTP-binding protein HSR1-related [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 450 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 26/122 (21%) Query: 147 GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI---VKE 203 G++K + +K++ IGI+G PN GKST +++T + +IA+YPFTT+ PN+G+ +KE Sbjct: 51 GKDKAFQIGIKMM--IGIVGAPNKGKSTLFSALTMHEVQIANYPFTTIKPNMGVAYAIKE 108 Query: 204 GYKEFI---------------------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLH 242 ++ I + D+ G++++AH+G G+G++FL L+ Sbjct: 109 CAEKKIGTKCKPRNSLCHNGMRMIPVNMVDVAGLVEDAHEGKGMGNQFLNDMAAADALML 168 Query: 243 IV 244 +V Sbjct: 169 VV 170 >gi|254880996|ref|ZP_05253706.1| translation-associated GTPase [Bacteroides sp. 4_3_47FAA] gi|319640003|ref|ZP_07994730.1| GTP-binding protein [Bacteroides sp. 3_1_40A] gi|254833789|gb|EET14098.1| translation-associated GTPase [Bacteroides sp. 4_3_47FAA] gi|317388281|gb|EFV69133.1| GTP-binding protein [Bacteroides sp. 3_1_40A] Length = 367 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLTKLAELVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 + DI G++K A +G G+G++FL + T +LH++ +ENV Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAILHVLRCFDDENV 112 >gi|330837060|ref|YP_004411701.1| GTP-binding protein YchF [Spirochaeta coccoides DSM 17374] gi|329748963|gb|AEC02319.1| GTP-binding protein YchF [Spirochaeta coccoides DSM 17374] Length = 364 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++VT A + A+YPF T+ PN+GIV + E I Sbjct: 4 NCGIVGLPNVGKSTIFSAVTSAPAEAANYPFCTIKPNVGIVTVPDARLDKIVELIPPKKV 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++ A +G G+G++FL +L H+V E+ Sbjct: 64 VPAVVEFVDIAGLVAGASKGEGLGNQFLASIREVGILAHVVRCFED 109 >gi|121612151|ref|YP_001000604.1| GTP-dependent nucleic acid-binding protein EngD [Campylobacter jejuni subsp. jejuni 81-176] gi|167005536|ref|ZP_02271294.1| translation-associated GTPase [Campylobacter jejuni subsp. jejuni 81-176] gi|87248912|gb|EAQ71875.1| GTP-binding protein YchF [Campylobacter jejuni subsp. jejuni 81-176] Length = 367 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN +V+ Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAMVEVPDLRLNELAKIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL + T V+LHIV EEN+ Sbjct: 65 MHSLIEFV--DIAGLVKGASKGEGLGNKFLSNIRETEVILHIVRCFDEENI 113 >gi|86151128|ref|ZP_01069344.1| GTP-binding protein YchF [Campylobacter jejuni subsp. jejuni 260.94] gi|315124423|ref|YP_004066427.1| GTP-binding protein YchF [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85842298|gb|EAQ59544.1| GTP-binding protein YchF [Campylobacter jejuni subsp. jejuni 260.94] gi|315018145|gb|ADT66238.1| GTP-binding protein YchF [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 367 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN +V+ Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAMVEVPDLRLNELAKIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL + T V+LHIV EEN+ Sbjct: 65 MHSLIEFV--DIAGLVKGASKGEGLGNKFLSNIRETEVILHIVRCFDEENI 113 >gi|153952592|ref|YP_001398001.1| translation-associated GTPase [Campylobacter jejuni subsp. doylei 269.97] gi|152940038|gb|ABS44779.1| GTP-binding protein YchF [Campylobacter jejuni subsp. doylei 269.97] Length = 367 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN +V+ Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAMVEVPDLRLNELAKIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL + T V+LHIV EEN+ Sbjct: 65 MHSLIEFV--DIAGLVKGASKGEGLGNKFLSNIRETEVILHIVRCFDEENI 113 >gi|315606968|ref|ZP_07881974.1| GTP-binding protein YchF [Prevotella buccae ATCC 33574] gi|315251349|gb|EFU31332.1| GTP-binding protein YchF [Prevotella buccae ATCC 33574] Length = 397 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 17/114 (14%) Query: 154 LKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKE 207 L+ K+ GI+GLPN GKST ++ AK + A++PF T+ PNLG++ E Sbjct: 27 LEDKMALKCGIVGLPNVGKSTLFNCLSSAKAQSANFPFCTIEPNLGVITVPDERLNKLAE 86 Query: 208 FI-----------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + + DI G++K A +G G+G++FL + ++H+V +++ Sbjct: 87 LVHPGRIVPATCEIVDIAGLVKGASKGEGLGNKFLGNIRECDAIIHVVRCFDDD 140 >gi|295134569|ref|YP_003585245.1| translation-associated GTPase [Zunongwangia profunda SM-A87] gi|294982584|gb|ADF53049.1| translation-associated GTPase [Zunongwangia profunda SM-A87] Length = 364 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G+V + +E + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNIGVVNVPDPRIKKLEELVNPERVQP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T +LH++ + + Sbjct: 64 ATVEIVDIAGLVKGASKGEGLGNQFLANIRETDAILHVLRCFDND 108 >gi|283954489|ref|ZP_06372009.1| putative GTP-binding protein [Campylobacter jejuni subsp. jejuni 414] gi|283794106|gb|EFC32855.1| putative GTP-binding protein [Campylobacter jejuni subsp. jejuni 414] Length = 367 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN +V+ Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAMVEVPDLRLNELAKIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL + T V+LHIV EEN+ Sbjct: 65 MHSLIEFV--DIAGLVKGASKGEGLGNKFLSNIRETEVILHIVRCFDEENI 113 >gi|289207533|ref|YP_003459599.1| GTP-binding protein YchF [Thioalkalivibrio sp. K90mix] gi|288943164|gb|ADC70863.1| GTP-binding protein YchF [Thioalkalivibrio sp. K90mix] Length = 364 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK------ 206 GI+GLPN GKST ++TRA+ +YPF T+ PN+G+V+ E K Sbjct: 6 GIVGLPNVGKSTLFNALTRAEIAAENYPFCTIDPNVGVVEVPDPRLARLTEIVKPERTLA 65 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A QG G+G++FL H T + +V E++ Sbjct: 66 TTVEFV--DIAGLVAGAAQGEGLGNQFLAHIRETDAIAQVVRCFEDD 110 >gi|294675136|ref|YP_003575752.1| GTP-binding protein YchF [Prevotella ruminicola 23] gi|294473135|gb|ADE82524.1| GTP-binding protein YchF [Prevotella ruminicola 23] Length = 366 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 30/178 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIEPNVGVITVPDERLTKLAELVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 + DI G++K A +G G+G++FL + T ++H++ E EN+ I + + Sbjct: 66 ATCEIVDIAGLVKGASKGEGLGNKFLGNIRETDAIIHVLRCFEDENITHVDGTIDPIRDK 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++EL+ L ++T++S LA K E A G + + H ++LE Sbjct: 126 EIIDTELQ-------LKDLETIES-RLA--KTEKAAAAGNKDAKIEATVLHAYKEVLE 173 >gi|262372326|ref|ZP_06065605.1| translation-associated GTPase [Acinetobacter junii SH205] gi|262312351|gb|EEY93436.1| translation-associated GTPase [Acinetobacter junii SH205] Length = 367 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 31/146 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T+ PN GIV Sbjct: 8 NCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLTAIVKPQRV 67 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI-- 258 EF+ DI G++ A +G G+G++FL + T + H+V E ENV I Sbjct: 68 IPTTMEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKIDP 125 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTV 284 LD+++ N+EL L+ +DTV Sbjct: 126 LDDIATINTEL-------ALADLDTV 144 >gi|302909698|ref|XP_003050130.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256731067|gb|EEU44417.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 365 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 59/95 (62%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ VT+ + ++A Y FTTL G+++ G E L D+PGII+ Sbjct: 59 ARIALVGFPSVGKSTFLSKVTKTRSEVASYAFTTLTAIPGVLEYGGAEIQLLDLPGIIEG 118 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A ++ Q A Sbjct: 119 AAEGKGRGRQVISAAKTSDLILMVLDATKKAEQRA 153 >gi|72160877|ref|YP_288534.1| GTP-dependent nucleic acid-binding protein EngD [Thermobifida fusca YX] gi|71914609|gb|AAZ54511.1| Conserved hypothetical protein 92 [Thermobifida fusca YX] Length = 364 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 20/128 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V + Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDALAANYPFATIEPNIGVVGVPDPRLDTLAEIFGSARTV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 DI GI++ A +G G+G++FL H T + ++ E+ ++D + Sbjct: 65 PATVTFVDIAGIVRGASEGEGLGNQFLAHIRETDAICQVIRVFEDPDVTHVDGVVDAARD 124 Query: 262 LSAYNSEL 269 + N+EL Sbjct: 125 IETINTEL 132 >gi|237752600|ref|ZP_04583080.1| translation-associated GTPase [Helicobacter winghamensis ATCC BAA-430] gi|229376089|gb|EEO26180.1| translation-associated GTPase [Helicobacter winghamensis ATCC BAA-430] Length = 368 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 61/109 (55%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV------------------- 201 IGI+GLPN GKST ++T+ + + A+YPF T+ PN IV Sbjct: 5 IGIVGLPNVGKSTTFNALTKTQNAQSANYPFCTIEPNKAIVPVPDTRLDALAKIVNPQKI 64 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + EF+ DI G++K A +G G+G++FL + + T V+LHIV E++ Sbjct: 65 QHSVVEFV--DIAGLVKGASKGEGLGNQFLANIKETEVILHIVRCFEDS 111 >gi|86153054|ref|ZP_01071259.1| GTP-binding protein YchF [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843939|gb|EAQ61149.1| GTP-binding protein YchF [Campylobacter jejuni subsp. jejuni HB93-13] Length = 367 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN +V+ Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAMVEVPDLRLNELAKIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL + T V+LHIV EEN+ Sbjct: 65 MHSLIEFV--DIAGLVKGASKGEGLGNKFLSNIRETEVILHIVRCFDEENI 113 >gi|205356413|ref|ZP_03223178.1| putative GTP binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205345798|gb|EDZ32436.1| putative GTP binding protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 367 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN +V+ Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAMVEVPDLRLNELAKIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL + T V+LHIV EEN+ Sbjct: 65 MHSLIEFV--DIAGLVKGASKGEGLGNKFLSNIRETEVILHIVRCFDEENI 113 >gi|187477050|ref|YP_785074.1| GTP-dependent nucleic acid-binding protein EngD [Bordetella avium 197N] gi|115421636|emb|CAJ48146.1| GTP-dependent nucleic acid-binding protein [Bordetella avium 197N] Length = 363 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++TRA +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLGKLAEIVKPERILP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A QG G+G++FL H T ++++V E+ Sbjct: 66 ATVEFV--DIAGLVAGASQGEGLGNQFLSHIRETDAIVNVVRCFED 109 >gi|322698167|gb|EFY89939.1| putative GTP-binding protein [Metarhizium acridum CQMa 102] Length = 347 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 59/95 (62%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ VT+ + ++A Y FTTL G+++ G E L D+PGII+ Sbjct: 41 ARISLVGFPSVGKSTFLSKVTKTRSEVASYAFTTLTAIPGVLEYGGAEIQLLDLPGIIEG 100 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A ++ Q A Sbjct: 101 AAEGKGRGRQVISAAKTSDLILMVLDATKKAEQRA 135 >gi|319955668|ref|YP_004166935.1| gtp-binding protein ychf [Cellulophaga algicola DSM 14237] gi|319424328|gb|ADV51437.1| GTP-binding protein YchF [Cellulophaga algicola DSM 14237] Length = 364 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G+V + +E + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNIGVVNVPDPRLQKLEELVDPERVLP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T +LH++ +++ Sbjct: 64 ATVDIVDIAGLVKGASKGEGLGNQFLGNIRETDAILHVLRCFDDD 108 >gi|159471011|ref|XP_001693650.1| predicted protein [Chlamydomonas reinhardtii] gi|158283153|gb|EDP08904.1| predicted protein [Chlamydomonas reinhardtii] Length = 415 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 19/125 (15%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V K + A++PF T+ PN+GIV+ G K+ I Sbjct: 55 GIVGLPNVGKSTLFNALVENGKAQAANFPFCTIEPNVGIVQVEDPRLAQLSAISGSKDLI 114 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 A DI G++K A +G G+G++FL + T + +V E++ + LD++ Sbjct: 115 PATVEFVDIAGLVKGASKGEGMGNQFLTNIRNTDAICQVVRCFEDD-DIVHVDPLDDIDV 173 Query: 265 YNSEL 269 N EL Sbjct: 174 INLEL 178 >gi|57237758|ref|YP_179006.1| translation-associated GTPase [Campylobacter jejuni RM1221] gi|57166562|gb|AAW35341.1| GTP-binding protein YchF [Campylobacter jejuni RM1221] Length = 367 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN +V+ Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAMVEVPDLRLNELAKIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL + T V+LHIV EEN+ Sbjct: 65 IHSLIEFV--DIAGLVKGASKGEGLGNKFLSNIRETEVILHIVRCFDEENI 113 >gi|298385793|ref|ZP_06995350.1| GTP-binding protein YchF [Bacteroides sp. 1_1_14] gi|298261021|gb|EFI03888.1| GTP-binding protein YchF [Bacteroides sp. 1_1_14] Length = 367 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLNALAELVHPQRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T ++H++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAIIHVLRCFDDD 110 >gi|255282557|ref|ZP_05347112.1| GTP-binding protein YchF [Bryantella formatexigens DSM 14469] gi|255266850|gb|EET60055.1| GTP-binding protein YchF [Bryantella formatexigens DSM 14469] Length = 365 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 21/107 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VK 202 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+ V Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVAVPDERLQKLAALYNSVKVT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL + ++H+V ++ Sbjct: 63 PAVIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFDD 107 >gi|29348525|ref|NP_812028.1| GTP-dependent nucleic acid-binding protein EngD [Bacteroides thetaiotaomicron VPI-5482] gi|29340430|gb|AAO78222.1| GTP-binding protein [Bacteroides thetaiotaomicron VPI-5482] Length = 367 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLNALAELVHPQRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T ++H++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAIIHVLRCFDDD 110 >gi|255004429|ref|ZP_05279230.1| GTPase ObgE [Anaplasma marginale str. Virginia] Length = 79 Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 45/79 (56%), Positives = 61/79 (77%) Query: 21 ISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSG 80 +SFRREKFIEFGGPDGG+GG GG V A+S +NTL+ FRY QH +A++G+ G + + G Sbjct: 1 MSFRREKFIEFGGPDGGNGGNGGSVIFIASSAVNTLLYFRYNQHIRAENGKAGSGKGKFG 60 Query: 81 AKGEDVVLTVPVGTQVFEE 99 A G + V+ VPVGTQ+++E Sbjct: 61 AAGRNRVVEVPVGTQLYDE 79 >gi|172059041|ref|YP_001815501.1| GTP-binding protein YchF [Exiguobacterium sibiricum 255-15] gi|171991562|gb|ACB62484.1| GTP-binding protein YchF [Exiguobacterium sibiricum 255-15] Length = 366 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 22/153 (14%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGVEAANYPFATIDPNVGVVEVPDARLRKLTELVNPKKTIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA-LEENVQAAYQCI--LDEL 262 F DI GI+K A +G G+G++FL + + +V ++EN+ + +D++ Sbjct: 66 TAFEFTDIAGIVKGASKGEGLGNKFLANIREVDAICQVVRCFIDENITHVSGKVSPIDDI 125 Query: 263 SAYNSEL-RKKIEIVGLSQIDTVDSDTLARKKN 294 N EL +E+V +I V +R KN Sbjct: 126 ETINLELILADLELVE-KRIQRVQKQVKSRDKN 157 >gi|50085194|ref|YP_046704.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter sp. ADP1] gi|49531170|emb|CAG68882.1| putative GTP-binding protein [Acinetobacter sp. ADP1] Length = 367 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 31/146 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T+ PN GIV Sbjct: 8 NCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDARLDKLAAIVKPQRI 67 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI-- 258 EF+ DI G++ A +G G+G++FL + T + H+V E ENV I Sbjct: 68 LPTTMEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKIDP 125 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTV 284 LD+++ N+EL L+ +DTV Sbjct: 126 LDDIATINTEL-------ALADLDTV 144 >gi|160884831|ref|ZP_02065834.1| hypothetical protein BACOVA_02821 [Bacteroides ovatus ATCC 8483] gi|255693593|ref|ZP_05417268.1| GTP-binding protein YchF [Bacteroides finegoldii DSM 17565] gi|293368550|ref|ZP_06615158.1| GTP-binding protein YchF [Bacteroides ovatus SD CMC 3f] gi|298482527|ref|ZP_07000712.1| GTP-binding protein YchF [Bacteroides sp. D22] gi|299145061|ref|ZP_07038129.1| GTP-binding protein YchF [Bacteroides sp. 3_1_23] gi|156109866|gb|EDO11611.1| hypothetical protein BACOVA_02821 [Bacteroides ovatus ATCC 8483] gi|260620659|gb|EEX43530.1| GTP-binding protein YchF [Bacteroides finegoldii DSM 17565] gi|292636347|gb|EFF54831.1| GTP-binding protein YchF [Bacteroides ovatus SD CMC 3f] gi|295085785|emb|CBK67308.1| GTP-binding protein YchF [Bacteroides xylanisolvens XB1A] gi|298271234|gb|EFI12810.1| GTP-binding protein YchF [Bacteroides sp. D22] gi|298515552|gb|EFI39433.1| GTP-binding protein YchF [Bacteroides sp. 3_1_23] Length = 367 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLNALAELVHPQRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T ++H++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAIIHVLRCFDDD 110 >gi|153807041|ref|ZP_01959709.1| hypothetical protein BACCAC_01318 [Bacteroides caccae ATCC 43185] gi|149130161|gb|EDM21371.1| hypothetical protein BACCAC_01318 [Bacteroides caccae ATCC 43185] Length = 367 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLNALAELVHPQRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T ++H++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAIIHVLRCFDDD 110 >gi|253569110|ref|ZP_04846520.1| translation-associated GTPase [Bacteroides sp. 1_1_6] gi|251841129|gb|EES69210.1| translation-associated GTPase [Bacteroides sp. 1_1_6] Length = 367 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLNALAELVHPQRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T ++H++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAIIHVLRCFDDD 110 >gi|237722016|ref|ZP_04552497.1| translation-associated GTPase [Bacteroides sp. 2_2_4] gi|229448885|gb|EEO54676.1| translation-associated GTPase [Bacteroides sp. 2_2_4] Length = 367 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLNALAELVHPQRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T ++H++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAIIHVLRCFDDD 110 >gi|257452420|ref|ZP_05617719.1| GTP-dependent nucleic acid-binding protein EngD [Fusobacterium sp. 3_1_5R] gi|317058963|ref|ZP_07923448.1| GTP-binding protein [Fusobacterium sp. 3_1_5R] gi|313684639|gb|EFS21474.1| GTP-binding protein [Fusobacterium sp. 3_1_5R] Length = 365 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 19/109 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V E I Sbjct: 4 IGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNIGMVTVPDERLNALSEIINPQRV 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 DI G++K A QG G+G++FL + T + +V E ENV Sbjct: 64 VAATVEFVDIAGLVKGAAQGEGLGNKFLSNIRSTAAICQVVRCFEDENV 112 >gi|226953006|ref|ZP_03823470.1| translation-associated GTPase [Acinetobacter sp. ATCC 27244] gi|294650594|ref|ZP_06727951.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter haemolyticus ATCC 19194] gi|226836327|gb|EEH68710.1| translation-associated GTPase [Acinetobacter sp. ATCC 27244] gi|292823591|gb|EFF82437.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter haemolyticus ATCC 19194] Length = 363 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 31/146 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLTAIVKPQRV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI-- 258 EF+ DI G++ A +G G+G++FL + T + H+V E ENV I Sbjct: 64 IPTTMEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKIDP 121 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTV 284 LD+++ N+EL L+ +DTV Sbjct: 122 LDDIATINTEL-------ALADLDTV 140 >gi|302421340|ref|XP_003008500.1| GTP-binding protein [Verticillium albo-atrum VaMs.102] gi|261351646|gb|EEY14074.1| GTP-binding protein [Verticillium albo-atrum VaMs.102] Length = 364 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ VT+ + ++A Y FTTL G+++ G E L D+PGII+ Sbjct: 83 ARIALVGFPSVGKSTFLSKVTKTRSEVAAYSFTTLTAIPGVLEYGGAEIQLLDLPGIIEG 142 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 143 AAEGKGRGRQVISAAKTSDMILMVLDATKRAEQRA 177 >gi|237717009|ref|ZP_04547490.1| translation-associated GTPase [Bacteroides sp. D1] gi|262405777|ref|ZP_06082327.1| translation-associated GTPase [Bacteroides sp. 2_1_22] gi|294648048|ref|ZP_06725593.1| GTP-binding protein YchF [Bacteroides ovatus SD CC 2a] gi|294810449|ref|ZP_06769105.1| GTP-binding protein YchF [Bacteroides xylanisolvens SD CC 1b] gi|229442992|gb|EEO48783.1| translation-associated GTPase [Bacteroides sp. D1] gi|262356652|gb|EEZ05742.1| translation-associated GTPase [Bacteroides sp. 2_1_22] gi|292636555|gb|EFF55028.1| GTP-binding protein YchF [Bacteroides ovatus SD CC 2a] gi|294442336|gb|EFG11147.1| GTP-binding protein YchF [Bacteroides xylanisolvens SD CC 1b] Length = 367 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLNALAELVHPQRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T ++H++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAIIHVLRCFDDD 110 >gi|297587658|ref|ZP_06946302.1| GTP-binding protein YchF [Finegoldia magna ATCC 53516] gi|297574347|gb|EFH93067.1| GTP-binding protein YchF [Finegoldia magna ATCC 53516] Length = 365 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 +GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K+ I Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAEMANYPFCTIDPNIGLVNVPDERVYKLAELFNSKKII 62 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 A DI G++K A +G G+G++FL++ + ++ ++ E EN+ Sbjct: 63 PATIEFYDIAGLVKGASKGEGLGNKFLENIRESDAIVEVLRCFEDENI 110 >gi|85059860|ref|YP_455562.1| translation-associated GTPase [Sodalis glossinidius str. 'morsitans'] gi|84780380|dbj|BAE75157.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 363 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIETANFPFCTIEPNTGVVPMPDARMDQLAEIVKPQRTVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ A C +++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVCPAEDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 DVINTEL 132 >gi|242239283|ref|YP_002987464.1| GTP-dependent nucleic acid-binding protein EngD [Dickeya dadantii Ech703] gi|242131340|gb|ACS85642.1| GTP-binding protein YchF [Dickeya dadantii Ech703] Length = 363 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E I Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDKLAEIINPQRVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G++K A +G G+G++FL + T + H+V E EN+ A D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENENIIHVAGKVSPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL L+ +DT + Sbjct: 126 DTINTEL-------ALADLDTCE 141 >gi|260172811|ref|ZP_05759223.1| GTP-dependent nucleic acid-binding protein EngD [Bacteroides sp. D2] gi|315921097|ref|ZP_07917337.1| translation-associated GTPase [Bacteroides sp. D2] gi|313694972|gb|EFS31807.1| translation-associated GTPase [Bacteroides sp. D2] Length = 367 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLNALAELVHPQRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T ++H++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAIIHVLRCFDDD 110 >gi|194335599|ref|YP_002017393.1| GTP-binding protein YchF [Pelodictyon phaeoclathratiforme BU-1] gi|194308076|gb|ACF42776.1| GTP-binding protein YchF [Pelodictyon phaeoclathratiforme BU-1] Length = 363 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV---KEGYKEFI---------- 209 GI+GLPN GKST ++T + + A+YPF T+ PN+G V E ++ Sbjct: 6 GIVGLPNVGKSTLFNAITAKQAEAANYPFCTIEPNVGTVLVPDERMQQIADVVKTPTLVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL H ++H+V E++ Sbjct: 66 ATLEIVDIAGLVKGASKGEGLGNQFLSHIREVDAIVHVVRCFEDD 110 >gi|283798332|ref|ZP_06347485.1| GTP-binding protein YchF [Clostridium sp. M62/1] gi|291073914|gb|EFE11278.1| GTP-binding protein YchF [Clostridium sp. M62/1] Length = 365 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 21/107 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------K 202 +GI+GLPN GKST S+T+A + A+YPF T+ PN+G+V Sbjct: 3 LGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVPVPDERLQKLAALYNSAKIT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL + ++H+V ++ Sbjct: 63 PAVIEFV--DIAGLVKGASKGEGLGNQFLSNIREVDAIVHVVRCFDD 107 >gi|169824070|ref|YP_001691681.1| GTP-binding protein [Finegoldia magna ATCC 29328] gi|303235236|ref|ZP_07321854.1| GTP-binding protein YchF [Finegoldia magna BVS033A4] gi|167830875|dbj|BAG07791.1| GTP-binding protein [Finegoldia magna ATCC 29328] gi|302493550|gb|EFL53338.1| GTP-binding protein YchF [Finegoldia magna BVS033A4] Length = 365 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 +GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K+ I Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAEMANYPFCTIDPNIGLVNVPDERVYKLAELFNSKKII 62 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 A DI G++K A +G G+G++FL++ + ++ ++ E EN+ Sbjct: 63 PATIEFYDIAGLVKGASKGEGLGNKFLENIRESDAIVEVLRCFEDENI 110 >gi|325479583|gb|EGC82679.1| GTP-binding protein YchF [Anaerococcus prevotii ACS-065-V-Col13] Length = 365 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 +GI+GLPN GKST ++T+A IA+YPF T+ PN+G+V K+ + Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGALIANYPFATIDPNVGLVNVPDRRLNVLAEMSNSKKIV 62 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI G++K A +G G+G++FL + T ++ ++ ++ Sbjct: 63 PAVVEFYDIAGLVKGASKGEGLGNKFLSNIRETDAIVEVLRCFDD 107 >gi|302381078|ref|ZP_07269538.1| GTP-binding protein YchF [Finegoldia magna ACS-171-V-Col3] gi|302311125|gb|EFK93146.1| GTP-binding protein YchF [Finegoldia magna ACS-171-V-Col3] Length = 365 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 +GI+GLPN GKST ++T+A ++A+YPF T+ PN+G+V K+ I Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAEMANYPFCTIDPNIGLVNVPDERVYKLAELFNSKKII 62 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 A DI G++K A +G G+G++FL++ + ++ ++ E EN+ Sbjct: 63 PATIEFYDIAGLVKGASKGEGLGNKFLENIRESDAIVEVLRCFEDENI 110 >gi|260591984|ref|ZP_05857442.1| GTP-binding protein YchF [Prevotella veroralis F0319] gi|260536268|gb|EEX18885.1| GTP-binding protein YchF [Prevotella veroralis F0319] Length = 367 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIEPNLGVISVPDERLNKLAEIVHPGKIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + ++H++ E++ Sbjct: 66 ATCEIVDIAGLVKGASKGEGLGNKFLGNIRECDAIIHVIRCFEDD 110 >gi|20093811|ref|NP_613658.1| translation-associated GTPase [Methanopyrus kandleri AV19] gi|19886731|gb|AAM01588.1| Predicted GTPase, probable translation factor [Methanopyrus kandleri AV19] Length = 402 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 24/107 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +GI+G PN GKSTF A+ T + + ADYPFTT+ PN G+ Sbjct: 5 VGIVGKPNVGKSTFFAAATLSPVETADYPFTTVDPNQGVAHVRTECPCKAFGVECQPRNS 64 Query: 203 -----EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + L D+ G++ AH+G G+G++FL + VL+H+V Sbjct: 65 SCIDGNRFVPVELIDVAGLVPGAHEGRGLGNKFLDDLRQASVLIHVV 111 >gi|322712845|gb|EFZ04418.1| putative GTP-binding protein [Metarhizium anisopliae ARSEF 23] Length = 352 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 59/95 (62%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ VT+ + ++A Y FTTL G+++ G E L D+PGII+ Sbjct: 46 ARISLVGFPSVGKSTFLSKVTKTRSEVASYAFTTLTAIPGVLEYGGAEIQLLDLPGIIEG 105 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A ++ Q A Sbjct: 106 AAEGKGRGRQVISAAKTSDLILMVLDATKKAEQRA 140 >gi|298373966|ref|ZP_06983924.1| GTP-binding protein YchF [Bacteroides sp. 3_1_19] gi|298268334|gb|EFI09989.1| GTP-binding protein YchF [Bacteroides sp. 3_1_19] Length = 367 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + I Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNVGVITVPDERLNKLAEIEHPQRVIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T +LH++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAILHVLRCFDDD 110 >gi|288801820|ref|ZP_06407262.1| GTP-binding protein YchF [Prevotella melaninogenica D18] gi|302344785|ref|YP_003813138.1| GTP-binding protein YchF [Prevotella melaninogenica ATCC 25845] gi|288335862|gb|EFC74295.1| GTP-binding protein YchF [Prevotella melaninogenica D18] gi|302150194|gb|ADK96456.1| GTP-binding protein YchF [Prevotella melaninogenica ATCC 25845] Length = 367 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIEPNLGVITVPDERLNKLAEIVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + ++H++ E++ Sbjct: 66 ATCEIVDIAGLVKGASKGEGLGNKFLGNIRECDAIIHVIRCFEDD 110 >gi|150009574|ref|YP_001304317.1| GTP-dependent nucleic acid-binding protein EngD [Parabacteroides distasonis ATCC 8503] gi|255013146|ref|ZP_05285272.1| GTP-dependent nucleic acid-binding protein EngD [Bacteroides sp. 2_1_7] gi|256838293|ref|ZP_05543803.1| translation-associated GTPase [Parabacteroides sp. D13] gi|149937998|gb|ABR44695.1| GTP-binding protein [Parabacteroides distasonis ATCC 8503] gi|256739212|gb|EEU52536.1| translation-associated GTPase [Parabacteroides sp. D13] Length = 367 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + I Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNVGVITVPDERLNKLAEIEHPQRVIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T +LH++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAILHVLRCFDDD 110 >gi|307131088|ref|YP_003883104.1| putative GTP-binding protein [Dickeya dadantii 3937] gi|306528617|gb|ADM98547.1| predicted GTP-binding protein [Dickeya dadantii 3937] Length = 363 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDQLAEIVKPQRTVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G++K A +G G+G++FL + T + H+V E EN+ A D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENENIIHVAGKVNPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 DTINTEL-------ALSDLDTCE 141 >gi|307721161|ref|YP_003892301.1| GTP-binding protein YchF [Sulfurimonas autotrophica DSM 16294] gi|306979254|gb|ADN09289.1| GTP-binding protein YchF [Sulfurimonas autotrophica DSM 16294] Length = 366 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 19/109 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-----------------KE 203 IG++GLPN GKST ++T+A+ + A+YPF T+ PN +V + Sbjct: 5 IGLVGLPNVGKSTTFNALTKAQNAEAANYPFCTIEPNKAVVPVPDKRLHELAKIVNPERI 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 Y DI G++K A +G G+G++FL + T V+L IV E EN+ Sbjct: 65 QYSTLDFVDIAGLVKGASKGEGLGNKFLSNIRETEVILQIVRCFEDENI 113 >gi|257466290|ref|ZP_05630601.1| GTP-dependent nucleic acid-binding protein EngD [Fusobacterium gonidiaformans ATCC 25563] gi|315917447|ref|ZP_07913687.1| GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563] gi|313691322|gb|EFS28157.1| GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563] Length = 365 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 19/109 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V E I Sbjct: 4 IGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNIGMVTVPDERLNALSEIINPQRV 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 DI G++K A QG G+G++FL + T + +V E ENV Sbjct: 64 VAATVEFVDIAGLVKGAAQGEGLGNKFLSNIRSTAAICQVVRCFEDENV 112 >gi|95930453|ref|ZP_01313189.1| conserved hypothetical protein [Desulfuromonas acetoxidans DSM 684] gi|95133493|gb|EAT15156.1| conserved hypothetical protein [Desulfuromonas acetoxidans DSM 684] Length = 364 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T A + A+YPF T+ PN+GIV + E + Sbjct: 6 GIVGLPNVGKSTIFNAITSAGAESANYPFCTIEPNVGIVAVPDKRLDALAEIVNPQRVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL H + + +I+ E++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLGHIRQVDAIANIIRCFEDD 110 >gi|241764112|ref|ZP_04762149.1| GTP-binding protein YchF [Acidovorax delafieldii 2AN] gi|241366576|gb|EER61064.1| GTP-binding protein YchF [Acidovorax delafieldii 2AN] Length = 364 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ + E I Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLKQLAEIISPERIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A QG G+G++FL H T ++++V E++ Sbjct: 66 AIVEFVDIAGLVAGASQGEGLGNQFLAHIRETDAIVNVVRCFEDD 110 >gi|188993908|ref|YP_001928160.1| GTP-dependent nucleic acid-binding protein EngD [Porphyromonas gingivalis ATCC 33277] gi|188593588|dbj|BAG32563.1| GTP-binding protein [Porphyromonas gingivalis ATCC 33277] Length = 367 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA---------- 211 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ + ILA Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIDPNVGVITVPDERLNILADLCKPQRLIP 65 Query: 212 ------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T +LH++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAILHVLRCFDDD 110 >gi|154494280|ref|ZP_02033600.1| hypothetical protein PARMER_03631 [Parabacteroides merdae ATCC 43184] gi|154085964|gb|EDN85009.1| hypothetical protein PARMER_03631 [Parabacteroides merdae ATCC 43184] Length = 367 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + I Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNVGVITVPDERLNKLAEIEHPQRVIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T +LH++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAILHVLRCFDDD 110 >gi|34539921|ref|NP_904400.1| GTP-dependent nucleic acid-binding protein EngD [Porphyromonas gingivalis W83] gi|34396232|gb|AAQ65299.1| conserved hypothetical protein TIGR00092 [Porphyromonas gingivalis W83] Length = 367 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA---------- 211 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ + ILA Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIDPNVGVITVPDERLNILADLCKPQRLIP 65 Query: 212 ------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T +LH++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAILHVLRCFDDD 110 >gi|218258592|ref|ZP_03474935.1| hypothetical protein PRABACTJOHN_00590 [Parabacteroides johnsonii DSM 18315] gi|218225362|gb|EEC98012.1| hypothetical protein PRABACTJOHN_00590 [Parabacteroides johnsonii DSM 18315] Length = 367 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + I Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNVGVITVPDERLNKLAEIEHPQRVIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T +LH++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAILHVLRCFDDD 110 >gi|115373528|ref|ZP_01460825.1| GTP-binding protein YchF [Stigmatella aurantiaca DW4/3-1] gi|310825288|ref|YP_003957646.1| GTP-binding protein YchF [Stigmatella aurantiaca DW4/3-1] gi|115369534|gb|EAU68472.1| GTP-binding protein YchF [Stigmatella aurantiaca DW4/3-1] gi|309398360|gb|ADO75819.1| GTP-binding protein YchF [Stigmatella aurantiaca DW4/3-1] Length = 369 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI+GLPN GKST +++ A + A+YPF T+ PN+G+V K+ Sbjct: 5 IGIVGLPNVGKSTLFNALSSAGAQAANYPFCTIEPNVGVVPVPDERLDKLSALIKPLKKI 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + + +LH++ E++ Sbjct: 65 PTSLEFVDIAGLVRGASKGEGLGNQFLANIRQVDAVLHVLRCFEDD 110 >gi|298208536|ref|YP_003716715.1| putative ATP/GTP-binding protein [Croceibacter atlanticus HTCC2559] gi|83848459|gb|EAP86328.1| putative ATP/GTP-binding protein [Croceibacter atlanticus HTCC2559] Length = 364 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G+V +E + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNIGVVNVPDPRLRKLEELVNPERVMP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G++K A +G G+G++FL + T +LH++ ++ Sbjct: 64 ATVDIVDIAGLVKGASKGEGLGNQFLGNIRETDAILHVLRCFDD 107 >gi|268323558|emb|CBH37146.1| putative GTP-binding protein [uncultured archaeon] Length = 400 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 26/111 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI----VKEGYKE---------- 207 I I G PN+GKSTF + T A +IA YPFTT+ PN+GI VK KE Sbjct: 4 IAIAGKPNSGKSTFFKAATLADVEIAAYPFTTISPNIGIAYVRVKCPCKEEAIQQVIPAG 63 Query: 208 ---------FI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 FI L D+ G+++ AH+G G+G+ FL + ++H++ A Sbjct: 64 CGKCIDGSRFIPVELMDVAGLVRGAHEGKGLGNEFLDELRQAEAIIHVIDA 114 >gi|303236250|ref|ZP_07322846.1| GTP-binding protein YchF [Prevotella disiens FB035-09AN] gi|302483564|gb|EFL46563.1| GTP-binding protein YchF [Prevotella disiens FB035-09AN] Length = 367 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIEPNLGVITVPDERLNKLAEIVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + ++H++ E++ Sbjct: 66 ATCEIVDIAGLVKGASKGEGLGNKFLGNIRECDAIIHVIRCFEDD 110 >gi|262383139|ref|ZP_06076276.1| GTP-binding protein YchF [Bacteroides sp. 2_1_33B] gi|301311761|ref|ZP_07217686.1| GTP-binding protein YchF [Bacteroides sp. 20_3] gi|262296017|gb|EEY83948.1| GTP-binding protein YchF [Bacteroides sp. 2_1_33B] gi|300830321|gb|EFK60966.1| GTP-binding protein YchF [Bacteroides sp. 20_3] Length = 367 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + I Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNVGVITVPDERLNKLAEIEHPQRVIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T +LH++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAILHVLRCFDDD 110 >gi|254424345|ref|ZP_05038063.1| GTP-binding protein YchF [Synechococcus sp. PCC 7335] gi|196191834|gb|EDX86798.1| GTP-binding protein YchF [Synechococcus sp. PCC 7335] Length = 363 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V AK + A++PF T+ PN+G+V KE Sbjct: 5 GIVGLPNVGKSTLFNAVVANAKAQAANFPFCTIEPNVGVVAVPDERLGTLADISSSKEVT 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI G++K A QG G+G++FL + ++H+V E + Sbjct: 65 PARVEFVDIAGLVKGASQGEGLGNQFLANIREVDAIIHVVRCFESD 110 >gi|297539290|ref|YP_003675059.1| GTP-binding protein YchF [Methylotenera sp. 301] gi|297258637|gb|ADI30482.1| GTP-binding protein YchF [Methylotenera sp. 301] Length = 361 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 32/152 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VKE 203 GI+GLPN GKST ++T+A +YPF T+ PN+GI V+ Sbjct: 4 GIVGLPNVGKSTLFNAITKAGIAAENYPFCTIEPNVGIVEVPDTRMQALIDIVKPQKVQP 63 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-NVQAAYQCI--LD 260 EF+ DI G++ A +G G+G++FL + T + H+V E+ NV I L Sbjct: 64 AIVEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDANVIHVSNKIDPLS 121 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 ++ N+EL L+ ++TV+ T+ R+ Sbjct: 122 DIEVINTEL-------ALADMETVEK-TMQRE 145 >gi|163788305|ref|ZP_02182751.1| GTP-binding protein [Flavobacteriales bacterium ALC-1] gi|159876625|gb|EDP70683.1| GTP-binding protein [Flavobacteriales bacterium ALC-1] Length = 364 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G+V +E + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNIGVVNVPDPRLAKLEELVNPEKVLP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T +LH++ + + Sbjct: 64 ATVEIVDIAGLVKGASKGEGLGNQFLANIRETDAILHVLRCFDND 108 >gi|78779617|ref|YP_397729.1| translation-associated GTPase [Prochlorococcus marinus str. MIT 9312] gi|78713116|gb|ABB50293.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9312] Length = 363 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 31/158 (19%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--------------- 206 GIIGLPN GKST F A V AK + A++PF T+ PN GIV + Sbjct: 5 GIIGLPNVGKSTLFNALVENAKAQAANFPFCTIEPNKGIVSVPDQRLQELGDLSSSQNII 64 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 EF+ DI G++K A +G G+G++FL + ++H+V E+N +D L Sbjct: 65 PTKIEFV--DIAGLVKGASKGEGLGNKFLSNIREVDAIIHVVRCFEDNDVIHVSGKVDPL 122 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 IEI+ L +++ D L +++ + Q Sbjct: 123 D--------DIEIINL-ELNLADLSQLQKRRERIKKQV 151 >gi|332292947|ref|YP_004431556.1| GTP-binding protein YchF [Krokinobacter diaphorus 4H-3-7-5] gi|332171033|gb|AEE20288.1| GTP-binding protein YchF [Krokinobacter diaphorus 4H-3-7-5] Length = 364 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A+YPF T+ PN+G+V +E + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANYPFCTIEPNVGVVNVPDERLSKLEELVKPERVVP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T ++H++ + + Sbjct: 64 ATVEIVDIAGLVKGASKGEGLGNQFLGNIRETDAIIHVLRCFDND 108 >gi|254457901|ref|ZP_05071328.1| GTP-binding protein YchF [Campylobacterales bacterium GD 1] gi|207085294|gb|EDZ62579.1| GTP-binding protein YchF [Campylobacterales bacterium GD 1] Length = 366 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-----------------KE 203 IG++GLPN GKST ++T+A+ + A+YPF T+ PN +V + Sbjct: 5 IGLVGLPNVGKSTTFNALTKAQNAEAANYPFCTIEPNKAVVPVPDKRLAELAKIVNPERI 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y DI G++K A +G G+G++FL + T V+L IV E+ Sbjct: 65 QYSTLDFVDIAGLVKGASKGEGLGNKFLSNIRETEVILQIVRCFED 110 >gi|313888117|ref|ZP_07821791.1| GTP-binding protein YchF [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845807|gb|EFR33194.1| GTP-binding protein YchF [Peptoniphilus harei ACS-146-V-Sch2b] Length = 362 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++T A + A+YPF T+ PN+G+V + Sbjct: 3 LGIVGLPNVGKSTLFNALTSAGAEAANYPFATIEPNVGVVNVPDERLEVLSKLNNSQRII 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 Y DI G++K A +G G+G++FL + ++H+V +EN+ Sbjct: 63 YTNIEFYDIAGLVKGASKGEGLGNQFLSNIREVDAIVHVVRCFDDENI 110 >gi|304440382|ref|ZP_07400271.1| GTP-binding protein YchF [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371134|gb|EFM24751.1| GTP-binding protein YchF [Peptoniphilus duerdenii ATCC BAA-1640] Length = 364 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 +GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K E IL Sbjct: 3 LGIVGLPNVGKSTLFNALTKAGAEAANYPFATIEPNIGVVAVPDERLEVLSKINNSERIL 62 Query: 211 A------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + ++ +V E++ Sbjct: 63 PATIEFFDIAGLVKGASKGEGLGNQFLANIREVDSIVQVVRCFEDS 108 >gi|119487016|ref|ZP_01620888.1| hypothetical protein L8106_18906 [Lyngbya sp. PCC 8106] gi|119455945|gb|EAW37079.1| hypothetical protein L8106_18906 [Lyngbya sp. PCC 8106] Length = 363 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 GI+GLPN GKST F A V AK A++PF T+ PN+G+V K E I+ Sbjct: 5 GIVGLPNVGKSTLFNAVVANAKATAANFPFCTIEPNVGVVAVPDERLEVLAKISNSEQII 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A QG G+G++FL + + ++H+V E + Sbjct: 65 PTRIEFVDIAGLVKGASQGEGLGNKFLANIRQVDAIIHVVRCFEND 110 >gi|227499425|ref|ZP_03929536.1| GTP-binding protein [Anaerococcus tetradius ATCC 35098] gi|227218487|gb|EEI83730.1| GTP-binding protein [Anaerococcus tetradius ATCC 35098] Length = 365 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 +GI+GLPN GKST ++T+A IA+YPF T+ PN+G+V K+ + Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGALIANYPFATIDPNVGLVNVPDKRLNKLSELSSSKKIV 62 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI G++K A +G G+G++FL + T ++ ++ ++ Sbjct: 63 PAVIEFYDIAGLVKGASKGEGLGNKFLSNIRETEAIVEVLRCFDD 107 >gi|225462191|ref|XP_002269074.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 422 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST F A V K + A++PF T+ PN+GIV Sbjct: 58 GIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVAVPDPRLHVLSDISKSQRVV 117 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QG G+G++FL H +L +V E+N Sbjct: 118 PASIEFV--DIAGLVKGASQGEGLGNKFLSHIREVDSILQVVRCFEDN 163 >gi|284161471|ref|YP_003400094.1| hypothetical protein Arcpr_0351 [Archaeoglobus profundus DSM 5631] gi|284011468|gb|ADB57421.1| GTPase of unknown function domain protein [Archaeoglobus profundus DSM 5631] Length = 388 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 22/109 (20%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK---------------- 202 + +IG+ G PNAGKSTF S T IA+YPFTT+ PN+GI Sbjct: 1 MIEIGLAGKPNAGKSTFFKSATLIDVAIANYPFTTIEPNVGIAYVRTRCVCRELGIECGK 60 Query: 203 --EGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 +G++ FI L D+ G++ AH+G G+G+ FL + + ++H+V A Sbjct: 61 CVDGWR-FIPVKLIDVAGLVPGAHEGRGLGNEFLDNLRQAEGIIHVVDA 108 >gi|315931948|gb|EFV10902.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 327] Length = 112 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 22/109 (20%) Query: 161 DIGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK----------------- 202 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN +V+ Sbjct: 4 SVGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAMVEVPDLRLNELAKIVKPEK 63 Query: 203 --EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL + T V+LHIV +E Sbjct: 64 IMHSLIEFV--DIAGLVKGASKGEGLGNKFLSNIRETEVILHIVRCFDE 110 >gi|269123221|ref|YP_003305798.1| GTP-binding protein YchF [Streptobacillus moniliformis DSM 12112] gi|268314547|gb|ACZ00921.1| GTP-binding protein YchF [Streptobacillus moniliformis DSM 12112] Length = 366 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 34/156 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKE----------------- 203 IGI+GLPN GKST ++T+ + + A+YPF T+ PN+GIV Sbjct: 4 IGIVGLPNVGKSTLFNAITKTQNAEAANYPFATIEPNVGIVSVPDQRLNEIAKIINPKRV 63 Query: 204 --GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQC 257 EF+ DI G++K A G G+G++FL + T + +V E+ +V+ + Sbjct: 64 LGASVEFV--DIAGLVKGASSGEGLGNQFLSNIRNTKAICQVVRCFEDENIIHVEGSVDP 121 Query: 258 ILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 I D + NSEL L+ IDTV+ + K Sbjct: 122 IRD-IEIINSELI-------LADIDTVEKAIVKNSK 149 >gi|170700437|ref|ZP_02891444.1| GTP-binding protein YchF [Burkholderia ambifaria IOP40-10] gi|170134649|gb|EDT02970.1| GTP-binding protein YchF [Burkholderia ambifaria IOP40-10] Length = 364 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDTRLKALSEIVKPERVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E +NV A +D++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVAGKVSPIDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 EVINTEL 132 >gi|107024126|ref|YP_622453.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia cenocepacia AU 1054] gi|116688548|ref|YP_834171.1| translation-associated GTPase [Burkholderia cenocepacia HI2424] gi|170731849|ref|YP_001763796.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia cenocepacia MC0-3] gi|254246452|ref|ZP_04939773.1| hypothetical protein BCPG_01198 [Burkholderia cenocepacia PC184] gi|105894315|gb|ABF77480.1| conserved hypothetical protein [Burkholderia cenocepacia AU 1054] gi|116646637|gb|ABK07278.1| GTP-binding protein YchF [Burkholderia cenocepacia HI2424] gi|124871228|gb|EAY62944.1| hypothetical protein BCPG_01198 [Burkholderia cenocepacia PC184] gi|169815091|gb|ACA89674.1| GTP-binding protein YchF [Burkholderia cenocepacia MC0-3] Length = 364 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDTRLKALSEIVKPERVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E +NV A +D++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVAGKVSPIDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 EVINTEL 132 >gi|238914586|gb|ACR78137.1| predicted GTPase [Beauveria bassiana] Length = 371 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 57/95 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ VT+ K + A Y FTTL G+++ G E L D+PGII+ Sbjct: 65 ARIALVGFPSVGKSTFLSKVTKTKSEAASYSFTTLTAIPGVLEYGGAEIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 125 ASEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA 159 >gi|171318021|ref|ZP_02907193.1| GTP-binding protein YchF [Burkholderia ambifaria MEX-5] gi|171096807|gb|EDT41684.1| GTP-binding protein YchF [Burkholderia ambifaria MEX-5] Length = 364 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALSEIVKPERVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E +NV A +D++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVAGKVSPIDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 EVINTEL 132 >gi|261749328|ref|YP_003257013.1| putative ATP/GTP-binding protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497420|gb|ACX83870.1| putative ATP/GTP-binding protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 349 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----KEGY--KEFI------- 209 GIIGLPN GKST ++ ++ ++PF T+ PN GI K Y K FI Sbjct: 4 GIIGLPNIGKSTLFNLISNSQVLSENFPFCTIEPNYGITNVPDKRLYELKTFINTMKIVP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+IK +H+G G+G++FL H T+V++H++ + Sbjct: 64 SKIQIVDIAGLIKGSHKGDGLGNKFLSHIRETNVIIHMIRCFRD 107 >gi|294155391|ref|YP_003559775.1| putative GTP-binding translation elongation factor EngD [Mycoplasma crocodyli MP145] gi|291600445|gb|ADE19941.1| putative GTP-binding translation elongation factor EngD [Mycoplasma crocodyli MP145] Length = 367 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST +++T+ + + ++YPFTT+ PN+ V K + Sbjct: 6 GIVGLPNVGKSTLFSALTKKQVEASNYPFTTIEPNISTVALKDDRLDKISQLVKPNKIIH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F DI G+++ A +G G+G++FL + ++H+V E+ Sbjct: 66 ATFDFVDIAGLVQGASKGEGLGNKFLTNIREVDAIIHVVRCFED 109 >gi|15828041|ref|NP_302304.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium leprae TN] gi|221230518|ref|YP_002503934.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium leprae Br4923] gi|4539092|emb|CAB39810.1| putative GTP-binding protein [Mycobacterium leprae] gi|13093594|emb|CAC30891.1| conserved hypothetical protein [Mycobacterium leprae] gi|219933625|emb|CAR72033.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length = 356 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 17/100 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY------ 205 +GI+GLPN GKST ++TR+ +A+YPF T+ PN G+V E + Sbjct: 5 LGIVGLPNVGKSTLFNALTRSNVVVANYPFATIEPNEGVVSLPDPRLAKLAELFGSERIL 64 Query: 206 -KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + DI G++K A +GAG+G++FL H + +V Sbjct: 65 PAQVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVV 104 >gi|21553978|gb|AAM63059.1| putative GTP-binding protein [Arabidopsis thaliana] Length = 394 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 22/145 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKE---- 207 IGI+GLPN GKST ++T+ ++PF T+ PN V + YK Sbjct: 27 IGIVGLPNVGKSTLFNTLTKLSIPAENFPFCTIEPNEARVNIPDERFDWLCQTYKPKSEI 86 Query: 208 --FI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 F+ + DI G+++ AH+G G+G+ FL H + H++ A E+ I+D + Sbjct: 87 PAFLEIHDIAGLVRGAHEGQGLGNNFLSHIRAVDGIFHVLRAFEDADIIHVDDIVDPVRD 146 Query: 262 LSAYNSELR-KKIEIVGLSQIDTVD 285 L ELR K IE VG +ID V+ Sbjct: 147 LETITEELRLKDIEFVG-KKIDDVE 170 >gi|15221444|ref|NP_174346.1| GTP binding [Arabidopsis thaliana] gi|4587514|gb|AAD25745.1|AC007060_3 Similar to WO8E3.3 gi|3880615 putative GTP-binding protein from C. elegans cosmid gb|Z92773. EST gb|AA597331 comes from this gene [Arabidopsis thaliana] gi|109134111|gb|ABG25054.1| At1g30580 [Arabidopsis thaliana] gi|332193125|gb|AEE31246.1| GTP-binding protein [Arabidopsis thaliana] Length = 394 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 22/145 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKE---- 207 IGI+GLPN GKST ++T+ ++PF T+ PN V + YK Sbjct: 27 IGIVGLPNVGKSTLFNTLTKLSIPAENFPFCTIEPNEARVNIPDERFDWLCQTYKPKSEI 86 Query: 208 --FI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 F+ + DI G+++ AH+G G+G+ FL H + H++ A E+ I+D + Sbjct: 87 PAFLEIHDIAGLVRGAHEGQGLGNNFLSHIRAVDGIFHVLRAFEDADIIHVDDIVDPVRD 146 Query: 262 LSAYNSELR-KKIEIVGLSQIDTVD 285 L ELR K IE VG +ID V+ Sbjct: 147 LETITEELRLKDIEFVG-KKIDDVE 170 >gi|145636339|ref|ZP_01792008.1| GTP-binding protein [Haemophilus influenzae PittHH] gi|145270504|gb|EDK10438.1| GTP-binding protein [Haemophilus influenzae PittHH] Length = 363 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + LD++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 DTINTEL 132 >gi|145640349|ref|ZP_01795933.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae R3021] gi|145274935|gb|EDK14797.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 22.4-21] Length = 363 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + LD++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 DTINTEL 132 >gi|145638696|ref|ZP_01794305.1| GTP-binding protein [Haemophilus influenzae PittII] gi|145272291|gb|EDK12199.1| GTP-binding protein [Haemophilus influenzae PittII] gi|309750189|gb|ADO80173.1| GTP-binding protein YchF [Haemophilus influenzae R2866] Length = 363 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + LD++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 DTINTEL 132 >gi|224066080|ref|XP_002302007.1| predicted protein [Populus trichocarpa] gi|222843733|gb|EEE81280.1| predicted protein [Populus trichocarpa] Length = 196 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 2/102 (1%) Query: 207 EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN 266 E LAD+PG+I+ AH G G+G FL+H RT VL+H+V A + Y+ + +EL YN Sbjct: 21 EATLADLPGLIEGAHLGKGLGRNFLRHLRRTRVLVHVVDAAAGDPVNDYRTVKEELRMYN 80 Query: 267 SELRKKIEIVGLSQIDTVD-SDTLARKKNE-LATQCGQVPFE 306 E ++ +V L++ID + D L E L C +VP E Sbjct: 81 PEYLERPYVVVLNKIDLPEGRDRLQSLTEEILRIGCDEVPSE 122 >gi|60683776|ref|YP_213920.1| GTP-dependent nucleic acid-binding protein EngD [Bacteroides fragilis NCTC 9343] gi|253564611|ref|ZP_04842068.1| translation-associated GTPase [Bacteroides sp. 3_2_5] gi|255011983|ref|ZP_05284109.1| GTP-dependent nucleic acid-binding protein EngD [Bacteroides fragilis 3_1_12] gi|265764725|ref|ZP_06093000.1| translation-associated GTPase [Bacteroides sp. 2_1_16] gi|313149818|ref|ZP_07812011.1| translation-associated GTPase [Bacteroides fragilis 3_1_12] gi|60495210|emb|CAH10031.1| putative ATP/GTP-binding protein [Bacteroides fragilis NCTC 9343] gi|251948387|gb|EES88669.1| translation-associated GTPase [Bacteroides sp. 3_2_5] gi|263254109|gb|EEZ25543.1| translation-associated GTPase [Bacteroides sp. 2_1_16] gi|301165361|emb|CBW24933.1| putative ATP/GTP-binding protein [Bacteroides fragilis 638R] gi|313138585|gb|EFR55945.1| translation-associated GTPase [Bacteroides fragilis 3_1_12] Length = 367 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLNKLAELVHPNRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T ++H++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAIIHVLRCFDDD 110 >gi|313204622|ref|YP_004043279.1| GTP-binding protein ychf [Paludibacter propionicigenes WB4] gi|312443938|gb|ADQ80294.1| GTP-binding protein YchF [Paludibacter propionicigenes WB4] Length = 365 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLNKLAELVHPQRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T +LH++ + + Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAILHVLRCFDND 110 >gi|145634611|ref|ZP_01790320.1| predicted GTPase, probable translation factor [Haemophilus influenzae PittAA] gi|145268156|gb|EDK08151.1| predicted GTPase, probable translation factor [Haemophilus influenzae PittAA] Length = 363 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + LD++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 DTINTEL 132 >gi|317405481|gb|EFV85790.1| GTP-dependent nucleic acid-binding protein [Achromobacter xylosoxidans C54] Length = 363 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++TRA +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLQKLAEIVKPERILS 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL H T ++++V E+ Sbjct: 66 ATVEFV--DIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFED 109 >gi|229844444|ref|ZP_04464584.1| translation-associated GTPase [Haemophilus influenzae 6P18H1] gi|229812693|gb|EEP48382.1| translation-associated GTPase [Haemophilus influenzae 6P18H1] Length = 363 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + LD++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 DTINTEL 132 >gi|227485079|ref|ZP_03915395.1| GTP-binding protein [Anaerococcus lactolyticus ATCC 51172] gi|227236912|gb|EEI86927.1| GTP-binding protein [Anaerococcus lactolyticus ATCC 51172] Length = 368 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 +GI+GLPN GKST ++T+A +A+YPF T+ PN+G+V K+ + Sbjct: 6 LGIVGLPNVGKSTLFNAITKAGALVANYPFATIDPNVGLVNVPDNRLNVLSEMSNSKKIV 65 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI G++K A +G G+G++FL + T ++ ++ ++ Sbjct: 66 PAVVEFYDIAGLVKGASKGEGLGNKFLSNIRETDAIVEVLRCFDD 110 >gi|16272342|ref|NP_438555.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus influenzae Rd KW20] gi|260580544|ref|ZP_05848372.1| translation-associated GTPase [Haemophilus influenzae RdAW] gi|1175666|sp|P44681|ENGD_HAEIN RecName: Full=GTP-dependent nucleic acid-binding protein engD gi|29726337|pdb|1JAL|A Chain A, Ychf Protein (Hi0393) gi|29726338|pdb|1JAL|B Chain B, Ychf Protein (Hi0393) gi|1573365|gb|AAC22052.1| conserved hypothetical GTP-binding protein [Haemophilus influenzae Rd KW20] gi|260092886|gb|EEW76821.1| translation-associated GTPase [Haemophilus influenzae RdAW] Length = 363 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + LD++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 DTINTEL 132 >gi|319957262|ref|YP_004168525.1| GTP-binding protein ychf [Nitratifractor salsuginis DSM 16511] gi|319419666|gb|ADV46776.1| GTP-binding protein YchF [Nitratifractor salsuginis DSM 16511] Length = 367 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 19/109 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-----------------KE 203 IG++GLPN GKST ++T+A+ + A+YPF T+ PN +V + Sbjct: 5 IGLVGLPNVGKSTTFNALTKAQNAESANYPFCTIEPNKAVVPVPDPRLDELARIVNPERI 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 Y DI G++K A +G G+G++FL + T V+L IV E EN+ Sbjct: 65 QYSTLDFVDIAGLVKGASKGEGLGNKFLSNIRETEVILQIVRCFEDENI 113 >gi|260582343|ref|ZP_05850136.1| translation-associated GTPase [Haemophilus influenzae NT127] gi|319775678|ref|YP_004138166.1| GTP-binding protein [Haemophilus influenzae F3047] gi|260094711|gb|EEW78606.1| translation-associated GTPase [Haemophilus influenzae NT127] gi|317450269|emb|CBY86485.1| GTP-binding protein [Haemophilus influenzae F3047] Length = 363 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + LD++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 DTINTEL 132 >gi|161526040|ref|YP_001581052.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia multivorans ATCC 17616] gi|189349244|ref|YP_001944872.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia multivorans ATCC 17616] gi|221201738|ref|ZP_03574776.1| GTP-binding protein YchF [Burkholderia multivorans CGD2M] gi|221207187|ref|ZP_03580197.1| GTP-binding protein YchF [Burkholderia multivorans CGD2] gi|160343469|gb|ABX16555.1| GTP-binding protein YchF [Burkholderia multivorans ATCC 17616] gi|189333266|dbj|BAG42336.1| probable translation factor [Burkholderia multivorans ATCC 17616] gi|221172775|gb|EEE05212.1| GTP-binding protein YchF [Burkholderia multivorans CGD2] gi|221178554|gb|EEE10963.1| GTP-binding protein YchF [Burkholderia multivorans CGD2M] Length = 364 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKPERIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQCI-LDEL 262 DI G++ A +G G+G++FL + T + H+V E++ V A + +D++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVVHVAGKVSPIDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 EVINTEL 132 >gi|41408780|ref|NP_961616.1| translation-associated GTPase [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397138|gb|AAS04999.1| hypothetical protein MAP_2682c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 357 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK-EFIL 210 +GI+GLPN GKST ++TR A+YPF T+ PN G+V E +K E I+ Sbjct: 5 LGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVPLPDPRLDKLAEMFKSERIV 64 Query: 211 A------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI G++K A +GAG+G++FL H + +V ++ Sbjct: 65 AAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFADD 110 >gi|53715858|ref|YP_101850.1| GTP-dependent nucleic acid-binding protein EngD [Bacteroides fragilis YCH46] gi|52218723|dbj|BAD51316.1| GTP-binding protein [Bacteroides fragilis YCH46] Length = 367 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLNKLAELVHPNRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T ++H++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAIIHVLRCFDDD 110 >gi|320450589|ref|YP_004202685.1| GTP-binding protein YchF [Thermus scotoductus SA-01] gi|320150758|gb|ADW22136.1| GTP-binding protein YchF [Thermus scotoductus SA-01] Length = 374 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 25/106 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +GI+GLPN GKST ++TRA+ A+YPF T+ N+G+V Sbjct: 4 VGIVGLPNVGKSTLFNALTRAQALAANYPFATIDKNVGVVSLEDERLYALQRVFAKGDRK 63 Query: 203 ----EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + EF+ DI G++K AH+G G+G++FL H + H++ Sbjct: 64 PPVVPTHVEFV--DIAGLVKGAHRGEGLGNQFLAHIREVAAIAHVL 107 >gi|148245097|ref|YP_001219791.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus Vesicomyosocius okutanii HA] gi|146326924|dbj|BAF62067.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus Vesicomyosocius okutanii HA] Length = 363 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 24/129 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T++ + +YPF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTQSNIESVNYPFCTIKPNIGIVPINDERLDKLAKIINPKKIIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 EF+ DI G++K A +G G+G++FL + T ++H++ A + +N+ + LD Sbjct: 66 AIIEFV--DIAGLVKGASKGDGLGNQFLTNIRETDAIIHVIRAFDNDNIIHVSGKVSPLD 123 Query: 261 ELSAYNSEL 269 ++ N+EL Sbjct: 124 DIEIINTEL 132 >gi|68248996|ref|YP_248108.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus influenzae 86-028NP] gi|145628756|ref|ZP_01784556.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 22.1-21] gi|148825326|ref|YP_001290079.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus influenzae PittEE] gi|329122268|ref|ZP_08250856.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus aegyptius ATCC 11116] gi|68057195|gb|AAX87448.1| predicted GTPase, probable translation factor [Haemophilus influenzae 86-028NP] gi|144979226|gb|EDJ88912.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 22.1-21] gi|148715486|gb|ABQ97696.1| predicted GTPase, probable translation factor [Haemophilus influenzae PittEE] gi|327473829|gb|EGF19246.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus aegyptius ATCC 11116] Length = 363 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + LD++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 ETINTEL 132 >gi|145632640|ref|ZP_01788374.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 3655] gi|144986835|gb|EDJ93387.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 3655] gi|309972448|gb|ADO95649.1| GTP-binding protein YchF [Haemophilus influenzae R2846] Length = 363 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + LD++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 ETINTEL 132 >gi|307731108|ref|YP_003908332.1| GTP-binding protein YchF [Burkholderia sp. CCGE1003] gi|323527466|ref|YP_004229619.1| GTP-binding protein YchF [Burkholderia sp. CCGE1001] gi|307585643|gb|ADN59041.1| GTP-binding protein YchF [Burkholderia sp. CCGE1003] gi|323384468|gb|ADX56559.1| GTP-binding protein YchF [Burkholderia sp. CCGE1001] Length = 364 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 28/149 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++ A +G G+G++FL + T + H+V E ENV I L ++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVANKIDPLSDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 N+EL L+ + TV+ LAR Sbjct: 126 EVINTEL-------ALADLATVEK-ALAR 146 >gi|229846480|ref|ZP_04466588.1| translation-associated GTPase [Haemophilus influenzae 7P49H1] gi|229810573|gb|EEP46291.1| translation-associated GTPase [Haemophilus influenzae 7P49H1] Length = 363 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + LD++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 ETINTEL 132 >gi|221213314|ref|ZP_03586289.1| GTP-binding protein YchF [Burkholderia multivorans CGD1] gi|221166766|gb|EED99237.1| GTP-binding protein YchF [Burkholderia multivorans CGD1] Length = 364 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKPERIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQCI-LDEL 262 DI G++ A +G G+G++FL + T + H+V E++ V A + +D++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVVHVAGKVSPIDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 EVINTEL 132 >gi|170696264|ref|ZP_02887396.1| GTP-binding protein YchF [Burkholderia graminis C4D1M] gi|170138824|gb|EDT07020.1| GTP-binding protein YchF [Burkholderia graminis C4D1M] Length = 364 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 28/149 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++ A +G G+G++FL + T + H+V E ENV I L ++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVANKIDPLSDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 N+EL L+ + TV+ LAR Sbjct: 126 EVINTEL-------ALADLATVEK-ALAR 146 >gi|90416944|ref|ZP_01224873.1| putative GTP-binding protein [marine gamma proteobacterium HTCC2207] gi|90331291|gb|EAS46535.1| putative GTP-binding protein [marine gamma proteobacterium HTCC2207] Length = 363 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 27/153 (17%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV--KEGYKEFILA------- 211 + GI+GLPN GKST ++T+A ++PF T+ PN G+V + ++ I A Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAGISAENFPFCTIEPNTGVVPIPDPRQDLISAIVKPQRI 63 Query: 212 --------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LD 260 DI G++ A +G G+G++FL TH + H+V +ENV I D Sbjct: 64 VPTSMEFVDIAGLVAGASKGEGLGNKFLGTIRETHAIAHVVRCFDDENVIHVEGTISPSD 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++ N+EL L+ +DTV+ L K Sbjct: 124 DIDVINTEL-------ALADLDTVEKAILRAAK 149 >gi|300313366|ref|YP_003777458.1| GTP-binding protein [Herbaspirillum seropedicae SmR1] gi|300076151|gb|ADJ65550.1| GTP-binding protein [Herbaspirillum seropedicae SmR1] Length = 364 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLKALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-NV--QAAYQCILDEL 262 DI G++ A +G G+G++FL H T ++++V E+ NV A LD++ Sbjct: 66 ATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGRVSPLDDI 125 Query: 263 SAYNSEL 269 + +EL Sbjct: 126 AVIQTEL 132 >gi|148827595|ref|YP_001292348.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus influenzae PittGG] gi|319898085|ref|YP_004136282.1| gtp-binding protein [Haemophilus influenzae F3031] gi|148718837|gb|ABQ99964.1| translation-associated GTPase [Haemophilus influenzae PittGG] gi|317433591|emb|CBY81975.1| GTP-binding protein [Haemophilus influenzae F3031] Length = 363 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + LD++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 ETINTEL 132 >gi|115350483|ref|YP_772322.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia ambifaria AMMD] gi|172059514|ref|YP_001807166.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia ambifaria MC40-6] gi|115280471|gb|ABI85988.1| GTP-binding protein YchF [Burkholderia ambifaria AMMD] gi|171992031|gb|ACB62950.1| GTP-binding protein YchF [Burkholderia ambifaria MC40-6] Length = 364 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDTRLKALSEIVKPERVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E +NV A +D++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVAGKVSPIDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 EVINTEL 132 >gi|325278975|ref|YP_004251517.1| GTP-binding protein YchF [Odoribacter splanchnicus DSM 20712] gi|324310784|gb|ADY31337.1| GTP-binding protein YchF [Odoribacter splanchnicus DSM 20712] Length = 366 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK---EGYKEFI---------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNVGVITVPDERLNKLVELVNPQNVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T ++H++ +++ Sbjct: 66 AVVEIVDIAGLVKGASKGEGLGNKFLSNIRETDAIIHVLRCFDDD 110 >gi|301169095|emb|CBW28692.1| predicted GTP-binding protein [Haemophilus influenzae 10810] Length = 363 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + LD++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 ETINTEL 132 >gi|224056743|ref|XP_002299001.1| predicted protein [Populus trichocarpa] gi|222846259|gb|EEE83806.1| predicted protein [Populus trichocarpa] Length = 370 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST F A V K + A++PF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVAVPDSRLNVLSELSKSQRAV 65 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QG G+G++FL H +L +V ++N Sbjct: 66 PASIEFV--DIAGLVKGASQGEGLGNKFLSHIREVDSILQVVRCFDDN 111 >gi|163756903|ref|ZP_02164011.1| putative ATP/GTP-binding protein [Kordia algicida OT-1] gi|161323139|gb|EDP94480.1| putative ATP/GTP-binding protein [Kordia algicida OT-1] Length = 363 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG+V E +E + Sbjct: 4 GIVGLPNVGKSTLFNCLSSAKAQSANFPFCTIEPNLGVVNVPDPRLEKLEELVNPQRVLP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+++ A +G G+G++FL + + ++H++ + + Sbjct: 64 ATVEIVDIAGLVRGASKGEGLGNQFLGNIRECNAIMHVLRCFDND 108 >gi|332285371|ref|YP_004417282.1| GTP-dependent nucleic acid-binding protein EngD [Pusillimonas sp. T7-7] gi|330429324|gb|AEC20658.1| GTP-dependent nucleic acid-binding protein EngD [Pusillimonas sp. T7-7] Length = 363 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST +VT+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNAVTKAGIAAENYPFCTIEPNVGVVEVPDARLAALADIVKPERVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++H+V E++ Sbjct: 66 AVVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVHVVRCFEDD 110 >gi|315932094|gb|EFV11040.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 327] Length = 144 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN +V+ Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAMVEVPDLRLNELAKIVKPEKI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL + T V+LHIV EEN+ Sbjct: 65 MHSLIEFV--DIAGLVKGASKGEGLGNKFLSNIRETEVILHIVRCFDEENI 113 >gi|297172154|gb|ADI23135.1| predicted GTPase, probable translation factor [uncultured gamma proteobacterium HF0770_09E07] Length = 362 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T K ++PF T+ PN+ V Sbjct: 6 GIVGLPNVGKSTLFNALTSQKIDAENFPFCTIEPNIARVNIPDERLDQLASLVKPEKVIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + EF+ DI G++K AH G G+G++FL H T H++ E+ Sbjct: 66 SFMEFV--DIAGLVKGAHSGEGLGNKFLSHIRETQCFAHVIRCFED 109 >gi|240948403|ref|ZP_04752781.1| translation-associated GTPase [Actinobacillus minor NM305] gi|240297229|gb|EER47787.1| translation-associated GTPase [Actinobacillus minor NM305] Length = 363 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQ-CILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + LD++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKISPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 EVINTEL 132 >gi|189218042|ref|YP_001938684.1| GTPase, translation factor [Methylacidiphilum infernorum V4] gi|189184900|gb|ACD82085.1| Predicted GTPase, probable translation factor [Methylacidiphilum infernorum V4] Length = 368 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 18/100 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKE-------------- 207 G++GLPN GKST ++T++K ++A+YPF T+ PN+GIV K Sbjct: 7 GLVGLPNVGKSTLFNALTKSKKAEVANYPFCTIDPNVGIVTVSDKRLEELSRLSKSAKTI 66 Query: 208 ---FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 F L DI G++K A QG G+G++FL H +L ++ Sbjct: 67 PAAFELVDIAGLVKGASQGEGLGNQFLSHIREVDAILLML 106 >gi|254253365|ref|ZP_04946683.1| hypothetical protein BDAG_02626 [Burkholderia dolosa AUO158] gi|124895974|gb|EAY69854.1| hypothetical protein BDAG_02626 [Burkholderia dolosa AUO158] Length = 364 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 28/149 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKPERIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQCI-LDEL 262 DI G++ A +G G+G++FL + T + H+V E++ V A + +D++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVVHVAGKVSPIDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 N+EL L+ + TV+ LAR Sbjct: 126 EVINTEL-------ALADLGTVEK-ALAR 146 >gi|134294613|ref|YP_001118348.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia vietnamiensis G4] gi|134137770|gb|ABO53513.1| GTP-binding protein YchF [Burkholderia vietnamiensis G4] Length = 364 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDTRLKALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E +NV A +D++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVAGKVSPIDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 EVINTEL 132 >gi|311108745|ref|YP_003981598.1| GTP-dependent nucleic acid-binding protein EngD [Achromobacter xylosoxidans A8] gi|310763434|gb|ADP18883.1| GTP-dependent nucleic acid-binding protein EngD [Achromobacter xylosoxidans A8] Length = 363 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++TRA +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLQKLAEIVKPERILS 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL H T ++++V E+ Sbjct: 66 ATVEFV--DIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFED 109 >gi|167856606|ref|ZP_02479307.1| translation-associated GTPase [Haemophilus parasuis 29755] gi|167852272|gb|EDS23585.1| translation-associated GTPase [Haemophilus parasuis 29755] Length = 363 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + LD++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKINPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 EVINTEL 132 >gi|332878657|ref|ZP_08446376.1| GTP-binding protein YchF [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683432|gb|EGJ56310.1| GTP-binding protein YchF [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 363 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG+V E + + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNLGVVNVPDPRLEKLEALVKPERVLP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+++ A +G G+G++FL + H ++H++ + + Sbjct: 64 ATVEIVDIAGLVRGASEGEGLGNQFLGNIRECHAIIHVLRCFDND 108 >gi|189464884|ref|ZP_03013669.1| hypothetical protein BACINT_01228 [Bacteroides intestinalis DSM 17393] gi|189437158|gb|EDV06143.1| hypothetical protein BACINT_01228 [Bacteroides intestinalis DSM 17393] Length = 367 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLTKLAELVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 + DI G++K A +G G+G++FL + T ++H++ +ENV Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAIIHVLRCFDDENV 112 >gi|318040319|ref|ZP_07972275.1| GTP-binding protein YchF [Synechococcus sp. CB0101] Length = 128 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V A+ + A+YPF T+ PN G+V KE I Sbjct: 5 GIVGLPNVGKSTLFNALVANAQAEAANYPFCTIEPNSGVVSVPDPRLQQLSDLSKSKELI 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A QG G+G++FL + ++H+V E + Sbjct: 65 PTRVEFVDIAGLVKGASQGEGLGNKFLANIREVDAIVHVVRCFEND 110 >gi|71894673|ref|YP_278781.1| translation-associated GTPase [Mycoplasma synoviae 53] gi|71851461|gb|AAZ44070.1| GTP-binding protein YchF [Mycoplasma synoviae 53] Length = 365 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+ + + ++Y FTT+ PN+ V K Y Sbjct: 6 GIVGLPNVGKSTLFKALTKKQVESSNYAFTTIEPNISTVSVVDKRLDEIAKIIKPNKIFY 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 66 ATFDFVDIAGLVKGASKGEGLGNKFLSNIREVDAIIHVVRCFED 109 >gi|310779310|ref|YP_003967643.1| GTP-binding protein YchF [Ilyobacter polytropus DSM 2926] gi|309748633|gb|ADO83295.1| GTP-binding protein YchF [Ilyobacter polytropus DSM 2926] Length = 364 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 23/130 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V + E I Sbjct: 4 IGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNIGMVTVPDNRLDALSEIINPQRV 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCIL 259 DI G++K A G G+G++FL + T + +V E+ +V+ + I Sbjct: 64 QHATVEFVDIAGLVKGAANGEGLGNKFLSNIRSTAAICQVVRCFEDENVVHVEGSVDPIR 123 Query: 260 DELSAYNSEL 269 D + NSEL Sbjct: 124 D-IEVINSEL 132 >gi|261368150|ref|ZP_05981033.1| GTP-binding protein YchF [Subdoligranulum variabile DSM 15176] gi|282569914|gb|EFB75449.1| GTP-binding protein YchF [Subdoligranulum variabile DSM 15176] Length = 376 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV------------------- 201 +GI+GLPN GKST ++T + + A+YPF T+ PN GIV Sbjct: 3 LGIVGLPNVGKSTLFNAITSTRNAQAANYPFCTIEPNSGIVAVPDARLDKLAEVWQTDKK 62 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A GAG+G++FL H L+H+V +++ Sbjct: 63 TPAIVEFV--DIAGLVKGAAHGAGLGNKFLGHIRECDALVHVVRCFDDD 109 >gi|110597806|ref|ZP_01386089.1| GTP-binding [Chlorobium ferrooxidans DSM 13031] gi|110340531|gb|EAT59014.1| GTP-binding [Chlorobium ferrooxidans DSM 13031] Length = 363 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFI----------- 209 GI+GLPN GKST ++T + + A+YPF T+ PN+G +V + + I Sbjct: 6 GIVGLPNVGKSTLFNAITAKQAEAANYPFCTIEPNVGTVLVPDERMQLIANVVKTPTLVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 + DI G++K A +G G+G++FL H ++H+V +EN+ Sbjct: 66 TTLEIVDIAGLVKGASKGEGLGNQFLSHIREVDAIVHVVRCFDDENI 112 >gi|325299484|ref|YP_004259401.1| GTP-binding protein YchF [Bacteroides salanitronis DSM 18170] gi|324319037|gb|ADY36928.1| GTP-binding protein YchF [Bacteroides salanitronis DSM 18170] Length = 367 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLNKLAELVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 + DI G++K A +G G+G++FL + T ++H++ +ENV Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAIIHVLRCFDDENV 112 >gi|255544712|ref|XP_002513417.1| GTP-binding protein, putative [Ricinus communis] gi|223547325|gb|EEF48820.1| GTP-binding protein, putative [Ricinus communis] Length = 417 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 22/117 (18%) Query: 154 LKLKLIADIGIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK---------- 202 K+ + GI+GLPN GKST F A V K + A++PF T+ PN+G V Sbjct: 44 FKISMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGTVAVPDPRLHVLS 103 Query: 203 ---------EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QG G+G++FL H +L +V E+N Sbjct: 104 GLSKSQRAVPASIEFV--DIAGLVKGASQGEGLGNKFLSHIREVDSILQVVRCFEDN 158 >gi|219870977|ref|YP_002475352.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus parasuis SH0165] gi|219691181|gb|ACL32404.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus parasuis SH0165] Length = 363 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + LD++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKINPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 EVINTEL 132 >gi|118579184|ref|YP_900434.1| GTP-dependent nucleic acid-binding protein EngD [Pelobacter propionicus DSM 2379] gi|118501894|gb|ABK98376.1| GTP-binding protein YchF [Pelobacter propionicus DSM 2379] Length = 364 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 21/109 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------------------- 201 + GI+GLPN GKST ++T A + A+YPF T+ PN+GIV Sbjct: 4 NCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVQVPDPRMDQLSAIVNPQRI 63 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + EF+ DI G++K A G G+G++FL H ++H+V +++ Sbjct: 64 QPTTIEFV--DIAGLVKGASAGEGLGNQFLGHIRSVDAIIHVVRCFDDD 110 >gi|254774116|ref|ZP_05215632.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium avium subsp. avium ATCC 25291] Length = 357 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK-EFIL 210 +GI+GLPN GKST ++TR A+YPF T+ PN G+V E +K E I+ Sbjct: 5 LGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVPLPDPRLDKLAEMFKSERIV 64 Query: 211 A------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI G++K A +GAG+G++FL H + +V ++ Sbjct: 65 AAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFADD 110 >gi|110638615|ref|YP_678824.1| GTP-dependent nucleic acid-binding protein EngD [Cytophaga hutchinsonii ATCC 33406] gi|110281296|gb|ABG59482.1| GTP-binding protein [Cytophaga hutchinsonii ATCC 33406] Length = 365 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYKEFIL------- 210 GI+GLPN GKST +++ AK + A+YPF T+ PN+G+V + G E I+ Sbjct: 6 GIVGLPNVGKSTLFNALSNAKAEAANYPFCTIEPNVGVVTVPDDRLGILEGIVKPEKVLP 65 Query: 211 -----ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + ++H++ +++ Sbjct: 66 AIIEFVDIAGLVKGASKGEGLGNQFLANIREVDAIVHVIRCFQDD 110 >gi|315224328|ref|ZP_07866162.1| GTP-binding protein YchF [Capnocytophaga ochracea F0287] gi|314945718|gb|EFS97733.1| GTP-binding protein YchF [Capnocytophaga ochracea F0287] Length = 363 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG+V E + + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNLGVVNVPDPRLEKLESLVKPERVMP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + + ++H++ E + Sbjct: 64 ATVEIVDIAGLVKGASKGEGLGNQFLGNIRECNAIIHVLRCFEND 108 >gi|313680791|ref|YP_004058530.1| GTP-binding protein ychf [Oceanithermus profundus DSM 14977] gi|313153506|gb|ADR37357.1| GTP-binding protein YchF [Oceanithermus profundus DSM 14977] Length = 373 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 25/111 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++T+A A+YPF T+ N+G+V Sbjct: 6 IGIVGLPNVGKSTLFNAITKAGALAANYPFATIDKNVGVVTVPDERLEKLADVFAKGERR 65 Query: 203 ----EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y EF+ DI G++K AH+G G+G++FL + + H+V E+ Sbjct: 66 PPVVPTYVEFV--DIAGLVKGAHRGEGLGNQFLGNIREVAAVAHVVRCFED 114 >gi|229495580|ref|ZP_04389313.1| GTP-binding protein YchF [Porphyromonas endodontalis ATCC 35406] gi|229317563|gb|EEN83463.1| GTP-binding protein YchF [Porphyromonas endodontalis ATCC 35406] Length = 367 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ + K I Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNVGVITVPDERLNALAEIDHPKRLIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T +LH++ +++ Sbjct: 66 ATVEIVDIAGLVKGASKGEGLGNKFLGNIRETDAILHVLRCFDDD 110 >gi|225849774|ref|YP_002730008.1| GTP-dependent nucleic acid-binding protein EngD [Persephonella marina EX-H1] gi|225646271|gb|ACO04457.1| GTP-binding protein YchF [Persephonella marina EX-H1] Length = 370 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 18/108 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKE 207 ++GI+GLPN GKST ++T AK +A+YPF T+ PN+GIV E K Sbjct: 4 NVGIVGLPNVGKSTIFNALTETAKAGVANYPFCTIDPNVGIVDLPDARLEKLAQIERSKR 63 Query: 208 FILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + A DI G++K A +G G+G++FL + + H+V E++ Sbjct: 64 IVPATIEFVDIAGLVKGASKGEGLGNQFLSNIRNVSAIAHVVRCFEDS 111 >gi|162455622|ref|YP_001617989.1| GTP-dependent nucleic acid-binding protein EngD [Sorangium cellulosum 'So ce 56'] gi|161166204|emb|CAN97509.1| GTP-binding protein [Sorangium cellulosum 'So ce 56'] Length = 363 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 17/101 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFI 209 ++GI+GLPN GKST ++T AK + +YPF T+ PN+G V K E I Sbjct: 4 EVGIVGLPNVGKSTLFNALTAAKAEAQNYPFCTIEPNVGAVPVPDDRLTTLAKLIKSEKI 63 Query: 210 L------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + DI G+++ A G G+G++FL H +LH+V Sbjct: 64 IPAMVQVVDIAGLVRGASTGEGLGNKFLSHIREVDAILHVV 104 >gi|289705640|ref|ZP_06502028.1| GTP-binding protein YchF [Micrococcus luteus SK58] gi|289557639|gb|EFD50942.1| GTP-binding protein YchF [Micrococcus luteus SK58] Length = 472 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 27/145 (18%) Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIA-DIGIIGLPNAGKSTFLASVTR 181 G G+AH A A P + + +A IG +GLPN GKST ++TR Sbjct: 85 GDAGSAHGTGPVRDASAAAGPPV---------DCRTVALTIGFVGLPNVGKSTLFNALTR 135 Query: 182 AKPKIADYPFTTLYPNLGIVKE------------GYKEFILA-----DIPGIIKNAHQGA 224 A+YPF T+ PN+G+V G + + A DI GI+K A +G Sbjct: 136 QTVLAANYPFATIEPNVGVVNLPDERLPQLAEIFGSERILPATVSFVDIAGIVKGASEGE 195 Query: 225 GIGDRFLKHTERTHVLLHIVSALEE 249 G+G++FL + H + +V A ++ Sbjct: 196 GLGNQFLANIREAHAIAQVVRAFDD 220 >gi|254429140|ref|ZP_05042847.1| GTP-binding protein YchF [Alcanivorax sp. DG881] gi|196195309|gb|EDX90268.1| GTP-binding protein YchF [Alcanivorax sp. DG881] Length = 363 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 31/153 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A ++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIDAENFPFCTIEPNTGVVPVPDPRLDKLSAIVSPERVMP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V +ENV + LD Sbjct: 66 ATMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFDDENVIHVSGKVSPLD 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 +++ N+EL L+ +DTV+ L K Sbjct: 124 DIAVINTEL-------ALADLDTVEKAHLRATK 149 >gi|325522824|gb|EGD01297.1| GTP-binding protein YchF [Burkholderia sp. TJI49] Length = 364 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDTRLKALAEIVKPERIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E +NV A +D++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVAGKVSPIDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 EVINTEL 132 >gi|289549369|ref|YP_003474357.1| GTP-binding protein YchF [Thermocrinis albus DSM 14484] gi|289182986|gb|ADC90230.1| GTP-binding protein YchF [Thermocrinis albus DSM 14484] Length = 368 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 22/107 (20%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST ++T+ AK + A+YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTQTAKAQAANYPFCTIEPNVGLVEVPDPRLYEIARRENSRKIT 65 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + EF+ DI G+++NA +G G+G++FL H ++ ++ E+ Sbjct: 66 PTFVEFV--DIAGLVRNASKGEGLGNQFLAHIREVDAIVQVLRCFED 110 >gi|305666736|ref|YP_003863023.1| GTP-binding protein [Maribacter sp. HTCC2170] gi|88708960|gb|EAR01194.1| GTP-binding protein [Maribacter sp. HTCC2170] Length = 364 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G+V E + + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNIGVVNVPDSRLEKLESLVNPERVLP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T +LH++ + + Sbjct: 64 ATVEIVDIAGLVKGASKGEGLGNQFLGNIRETDAILHVLRCFDND 108 >gi|327402153|ref|YP_004342991.1| GTP-binding protein YchF [Fluviicola taffensis DSM 16823] gi|327317661|gb|AEA42153.1| GTP-binding protein YchF [Fluviicola taffensis DSM 16823] Length = 365 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G + E + + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNVGTISVPDPRLEKLESMVNPERVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G++K A +G G+G++FL + T +LH++ E+ Sbjct: 66 TTMEIVDIAGLVKGASKGEGLGNQFLANIRETDAILHVLRCFED 109 >gi|46199128|ref|YP_004795.1| translation-associated GTPase [Thermus thermophilus HB27] gi|46196752|gb|AAS81168.1| probable GTP-binding protein [Thermus thermophilus HB27] Length = 368 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 25/106 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +GI+GLPN GKST ++TRA+ A+YPF T+ N+G+V Sbjct: 4 VGIVGLPNVGKSTLFNALTRAQALAANYPFATIDKNVGVVPLEDERLYALQRTFAKGERV 63 Query: 203 ----EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + EF+ DI G++K AH+G G+G++FL H + H++ Sbjct: 64 PPAVPTHVEFV--DIAGLVKGAHKGEGLGNQFLAHIREVAAIAHVL 107 >gi|187925479|ref|YP_001897121.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia phytofirmans PsJN] gi|187716673|gb|ACD17897.1| GTP-binding protein YchF [Burkholderia phytofirmans PsJN] Length = 364 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 28/149 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++ A +G G+G++FL + T + H+V E ENV I L ++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVANKIDPLSDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 N+EL L+ + TV+ LAR Sbjct: 126 EVINTEL-------ALADLATVEK-ALAR 146 >gi|94502322|ref|ZP_01308796.1| GTP-binding protein Obg [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|94451118|gb|EAT14069.1| GTP-binding protein Obg [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] Length = 128 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 44/95 (46%), Positives = 67/95 (70%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 KF D K+Y +SGDGG+G I FR+EKFI GGPDGG GG+GG++ I+ + L T+ +Y Sbjct: 14 KFTDFIKIYCKSGDGGSGIIHFRKEKFINRGGPDGGDGGKGGNILIRGNNKLFTISHLKY 73 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV 96 ++H A++G+ G + +G+ G+D ++ VP+GT V Sbjct: 74 KKHIIAENGKNGGRNRITGSNGKDSIIEVPIGTIV 108 >gi|66810259|ref|XP_638853.1| hypothetical protein DDB_G0283773 [Dictyostelium discoideum AX4] gi|60467479|gb|EAL65501.1| hypothetical protein DDB_G0283773 [Dictyostelium discoideum AX4] Length = 434 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------------------- 200 IG IG P+AGKS+FL + T + K+ +YPFTT+ PN+G+ Sbjct: 7 IGCIGKPSAGKSSFLNAATDSTAKVGNYPFTTIEPNIGVAYYLTECPCKKYDKSSLCSPR 66 Query: 201 ---VKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 K+G + + D+ G++ A +G G+G++FL HVLLH+V Sbjct: 67 YGSCKDGNRNIPVKMLDVAGLVPGASEGKGLGNQFLDDLRHAHVLLHVV 115 >gi|332289776|ref|YP_004420628.1| GTP-dependent nucleic acid-binding protein EngD [Gallibacterium anatis UMN179] gi|330432672|gb|AEC17731.1| GTP-dependent nucleic acid-binding protein EngD [Gallibacterium anatis UMN179] Length = 363 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDELAKIVNPQRVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A G G+G++FL + T + H+V E N Sbjct: 66 TTMEFV--DIAGLVKGASNGEGLGNKFLANIRETDAIGHVVRCFENN 110 >gi|256069113|ref|XP_002571035.1| mitochondrial gtpase [Schistosoma mansoni] gi|238651975|emb|CAZ38720.1| mitochondrial gtpase, putative [Schistosoma mansoni] Length = 183 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 30/55 (54%), Positives = 42/55 (76%) Query: 147 GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV 201 GQ L++ +AD+G +G PNAGKST L S+TRA+PK+A YPFTTL P++G++ Sbjct: 99 GQLCEFILRMSKLADLGFVGCPNAGKSTLLRSLTRARPKVAPYPFTTLRPHIGML 153 >gi|315452639|ref|YP_004072909.1| putative GTP-binding protein-YchF [Helicobacter felis ATCC 49179] gi|315131691|emb|CBY82319.1| putative GTP-binding protein-YchF [Helicobacter felis ATCC 49179] Length = 377 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 18/107 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIV-----------------KE 203 IGI+GLPN GKS+ ++TR A+ + A+YPF T+ PN +V K Sbjct: 16 IGIVGLPNVGKSSTFNALTRTAQAQSANYPFCTIDPNKALVNVPDARLEALAQIVKPEKI 75 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y DI G+IK A G G+G++FL + V+LH+V E++ Sbjct: 76 QYSSVEFVDIAGLIKGASAGEGLGNQFLANIRECAVILHVVRCFEDS 122 >gi|313905198|ref|ZP_07838566.1| GTP-binding protein YchF [Eubacterium cellulosolvens 6] gi|313469951|gb|EFR65285.1| GTP-binding protein YchF [Eubacterium cellulosolvens 6] Length = 370 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 21/107 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VK 202 +GI+GLPN GKST ++T+A A+YPF T+ PN+G+ V Sbjct: 3 LGIVGLPNVGKSTLFNALTQAGALAANYPFATIDPNVGVVPVPDERLKLLGDFFNSKKVT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 63 PAIVEFV--DIAGLVKGASKGEGLGNQFLANIRECDAIVHVVRCFED 107 >gi|256818946|ref|YP_003140225.1| GTP-dependent nucleic acid-binding protein EngD [Capnocytophaga ochracea DSM 7271] gi|256580529|gb|ACU91664.1| GTP-binding protein YchF [Capnocytophaga ochracea DSM 7271] Length = 363 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG+V E + + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNLGVVNVPDPRLEKLESLVKPERVMP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + + ++H++ E + Sbjct: 64 ATVEIVDIAGLVKGASKGEGLGNQFLGNIRECNAIIHVLRCFEND 108 >gi|255535408|ref|YP_003095779.1| GTP-binding and nucleic acid-binding protein YchF [Flavobacteriaceae bacterium 3519-10] gi|255341604|gb|ACU07717.1| GTP-binding and nucleic acid-binding protein YchF [Flavobacteriaceae bacterium 3519-10] Length = 363 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------- 209 GI+GLPN GKST ++ AK + A+YPF T+ PNLG V + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANYPFCTIEPNLGTVSVPDQRLFELEKLVNPERVLP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++K A +G G+G++FL + ++H++ E Sbjct: 64 AVVEIVDIAGLVKGASKGEGLGNQFLANIRECEAIIHVLRCFE 106 >gi|304373310|ref|YP_003856519.1| Predicted GTPase, probable translation factor [Mycoplasma hyorhinis HUB-1] gi|304309501|gb|ADM21981.1| Predicted GTPase, probable translation factor [Mycoplasma hyorhinis HUB-1] gi|330723816|gb|AEC46186.1| GTP-binding protein YchF [Mycoplasma hyorhinis MCLD] Length = 367 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+G PN GKS+ +++T ++ +IA+YPF T+ P++ +V K Y Sbjct: 6 GIVGFPNVGKSSLFSALTSSQVEIANYPFATIDPSVAVVEIKDKRLNEIAKIVNPEKIVY 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G+I A +G G+G++FL + ++H+V ++N Sbjct: 66 ATFSFVDIAGLIAGASKGEGLGNKFLANIRDVDAIIHVVRCFDDN 110 >gi|257069421|ref|YP_003155676.1| GTP-dependent nucleic acid-binding protein EngD [Brachybacterium faecium DSM 4810] gi|256560239|gb|ACU86086.1| GTP-binding protein YchF [Brachybacterium faecium DSM 4810] Length = 361 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 17/103 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------KEGYKEF------ 208 IGI+GLPN GKST ++TRA+ A+YPF T+ PN+G+V E K F Sbjct: 5 IGIVGLPNVGKSTLFNALTRAEVLAANYPFATIDPNVGVVPLPDPRLAELAKVFGSQKLL 64 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 DI GI+K A +G G+G++FL + + + A Sbjct: 65 PATVSFVDIAGIVKGASEGEGLGNKFLANIREAEAICQVTRAF 107 >gi|325287884|ref|YP_004263674.1| GTP-binding protein YchF [Cellulophaga lytica DSM 7489] gi|324323338|gb|ADY30803.1| GTP-binding protein YchF [Cellulophaga lytica DSM 7489] Length = 364 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 17/99 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G+V + +E + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNIGVVNVPDARLQKLEELVNPERVLP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + DI G++K A +G G+G++FL + T +LH++ Sbjct: 64 ATVEIVDIAGLVKGASKGEGLGNQFLGNIRETDAILHVL 102 >gi|332886104|gb|EGK06348.1| GTP-binding protein YchF [Dysgonomonas mossii DSM 22836] Length = 367 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNVGVITVPDERLNKLAELVKPNRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T ++H++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAIIHVLRCFDDD 110 >gi|281422311|ref|ZP_06253310.1| GTP-binding protein YchF [Prevotella copri DSM 18205] gi|281403632|gb|EFB34312.1| GTP-binding protein YchF [Prevotella copri DSM 18205] Length = 367 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 28/156 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIEPNLGVITVPDERLNKLAEIVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQCI--LDE 261 + DI G++K A +G G+G++FL + ++H++ +++ V+ + L++ Sbjct: 66 ATCEIVDIAGLVKGASKGEGLGNKFLGNIRECDAIIHVIRCFDDDNIVREGGAKVDPLED 125 Query: 262 LSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 S ++EL+ L ++T++S +KK A Sbjct: 126 KSVIDTELQ-------LKDLETIESQLTKQKKTAAA 154 >gi|168335419|ref|ZP_02693510.1| GTP-binding protein YchF [Epulopiscium sp. 'N.t. morphotype B'] Length = 362 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 22/111 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG----------IVKEGYK---- 206 ++GI+GLP GKST ++T+ + A+YPF T+ PN G ++ E YK Sbjct: 2 NLGIVGLPXVGKSTLFNALTKMEADAANYPFCTIEPNTGRVNVPDSRLDVLXEMYKSEKV 61 Query: 207 -----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G+IK A +G G+G++FL H ++ +V E EN+ Sbjct: 62 IPAVCEFV--DIAGLIKGASKGEGLGNQFLSHIREVDAIVQVVRCFEDENI 110 >gi|110833376|ref|YP_692235.1| GTP-dependent nucleic acid-binding protein EngD [Alcanivorax borkumensis SK2] gi|110646487|emb|CAL15963.1| GTP-binding protein YchF [Alcanivorax borkumensis SK2] Length = 363 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 31/145 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A ++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIDAENFPFCTIEPNTGVVPVPDPRLDKLEAIVNPERVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V +ENV + LD Sbjct: 66 ATMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFDDENVIHVSGKVSPLD 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVD 285 +++ N+EL L+ +DTV+ Sbjct: 124 DIAVINTEL-------ALADLDTVE 141 >gi|225016741|ref|ZP_03705933.1| hypothetical protein CLOSTMETH_00653 [Clostridium methylpentosum DSM 5476] gi|224950409|gb|EEG31618.1| hypothetical protein CLOSTMETH_00653 [Clostridium methylpentosum DSM 5476] Length = 364 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK---------------EGYK 206 +G++GLPN GKST ++T A + A+YPF T+ PN+G+V + + Sbjct: 3 LGMVGLPNVGKSTLFNAITNAGAESANYPFCTIEPNVGVVSVPDERLDQLAKMYDPDKFT 62 Query: 207 EFIL--ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 +L DI G++K A +G G+G++FL + ++H+V + EN+ Sbjct: 63 PAVLEFVDIAGLVKGASKGEGLGNKFLSNIREVDAIVHVVRCFQDENI 110 >gi|254468366|ref|ZP_05081772.1| GTP-binding protein YchF [beta proteobacterium KB13] gi|207087176|gb|EDZ64459.1| GTP-binding protein YchF [beta proteobacterium KB13] Length = 361 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T++ + A+YPF T+ PN GIV+ Sbjct: 4 GIVGLPNVGKSTLFNAITKSGIEAANYPFCTIEPNSGIVEVPDLRLNKLAAIVNPEKIMP 63 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL + T+ +LH+V ++ Sbjct: 64 AIVEFV--DIAGLVAGASKGEGLGNKFLANIRETNAILHVVRCFDD 107 >gi|149370484|ref|ZP_01890173.1| translation-associated GTPase [unidentified eubacterium SCB49] gi|149356035|gb|EDM44592.1| translation-associated GTPase [unidentified eubacterium SCB49] Length = 364 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G+V + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNVGVVNVPDNRLVKLEELVNPERVLP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G++K A +G G+G++FL + T +LH++ ++ Sbjct: 64 ATVEIVDIAGLVKGASKGEGLGNQFLGNIRETDAILHVLRCFDD 107 >gi|86142190|ref|ZP_01060700.1| putative ATP/GTP-binding protein [Leeuwenhoekiella blandensis MED217] gi|85830942|gb|EAQ49399.1| putative ATP/GTP-binding protein [Leeuwenhoekiella blandensis MED217] Length = 364 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G+V +E + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNVGVVNVPDPRLSKLEELVKPERVIP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T +LH++ + + Sbjct: 64 ATVDIVDIAGLVKGASKGEGLGNQFLGNIRETDAILHVLRCFDND 108 >gi|194334595|ref|YP_002016455.1| GTP-dependent nucleic acid-binding protein EngD [Prosthecochloris aestuarii DSM 271] gi|194312413|gb|ACF46808.1| GTP-binding protein YchF [Prosthecochloris aestuarii DSM 271] Length = 363 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV---KEGYKEFI---------- 209 GI+GLPN GKST ++T + + A+YPF T+ PN+G V E +E Sbjct: 6 GIVGLPNVGKSTLFNAITAKQAEAANYPFCTIEPNIGTVLVPDERMQELASIVKTPTIIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+++ A +G G+G++FL H ++H+V ++ Sbjct: 66 ATLEIVDIAGLVRGASKGEGLGNQFLSHIREVDAIVHVVRCFDD 109 >gi|296159474|ref|ZP_06842298.1| GTP-binding protein YchF [Burkholderia sp. Ch1-1] gi|295890182|gb|EFG69976.1| GTP-binding protein YchF [Burkholderia sp. Ch1-1] Length = 364 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 28/149 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++ A +G G+G++FL + T + H+V E ENV + L ++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVANKVDPLSDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 N+EL L+ + TV+ LAR Sbjct: 126 EVINTEL-------ALADLATVEK-ALAR 146 >gi|145601751|ref|XP_363056.2| conserved hypothetical protein [Magnaporthe oryzae 70-15] gi|145010263|gb|EDJ94919.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] Length = 371 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 59/95 (62%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ VT+ + ++A Y FTTL G+++ G E L D+PGII+ Sbjct: 65 ARISLVGFPSVGKSTFLSKVTKTRSEVAAYSFTTLTAIPGVLEYGGAEIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A ++ Q A Sbjct: 125 AAEGKGRGRQVISAAKTSDMILMVLDATKKAEQRA 159 >gi|293607606|ref|ZP_06689940.1| GTP-dependent nucleic acid-binding protein EngD [Achromobacter piechaudii ATCC 43553] gi|292814039|gb|EFF73186.1| GTP-dependent nucleic acid-binding protein EngD [Achromobacter piechaudii ATCC 43553] Length = 363 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++TRA +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTRAGIAAENYPFCTIEPNVGVVEVPDPRLQKLAEIVKPERILS 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL H T ++++V E+ Sbjct: 66 ATVEFV--DIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFED 109 >gi|292488078|ref|YP_003530955.1| putative GTP-binding protein 9 [Erwinia amylovora CFBP1430] gi|292899289|ref|YP_003538658.1| GTP-dependent nucleic acid-binding protein [Erwinia amylovora ATCC 49946] gi|291199137|emb|CBJ46251.1| GTP-dependent nucleic acid-binding protein [Erwinia amylovora ATCC 49946] gi|291553502|emb|CBA20547.1| putative GTP-binding protein 9 [Erwinia amylovora CFBP1430] gi|312172209|emb|CBX80466.1| putative GTP-binding protein 9 [Erwinia amylovora ATCC BAA-2158] Length = 363 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDSRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ + D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 DTINTEL-------ALSDLDTCE 141 >gi|188534023|ref|YP_001907820.1| GTP-dependent nucleic acid-binding protein EngD [Erwinia tasmaniensis Et1/99] gi|188029065|emb|CAO96933.1| Putative GTP-binding protein [Erwinia tasmaniensis Et1/99] Length = 363 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDSRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ + D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 ETINTEL-------ALSDLDTCE 141 >gi|297565109|ref|YP_003684081.1| GTP-binding protein YchF [Meiothermus silvanus DSM 9946] gi|296849558|gb|ADH62573.1| GTP-binding protein YchF [Meiothermus silvanus DSM 9946] Length = 370 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 24/132 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFIL----- 210 +GI+GLPN GKST ++T+A A+YPF T+ N+G+V E ++ + Sbjct: 4 VGIVGLPNVGKSTLFNAITKAGALAANYPFATIDKNVGVVSLPDPRLEALQKLFIKGDRV 63 Query: 211 ----------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC- 257 DI G++K AH+G G+G++FL + + H+V + V + Q Sbjct: 64 PPIVPTHVEFVDIAGLVKGAHKGEGLGNQFLANIREVAAIAHVVRCFADPNVVHVSGQVN 123 Query: 258 ILDELSAYNSEL 269 LD+L N+EL Sbjct: 124 PLDDLETINTEL 135 >gi|71909345|ref|YP_286932.1| translation-associated GTPase [Dechloromonas aromatica RCB] gi|71848966|gb|AAZ48462.1| Conserved hypothetical protein 92 [Dechloromonas aromatica RCB] Length = 363 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK---------------- 206 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV+ K Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVEVPDKRMKALAEIVKPQKMQP 65 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++H+V ++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAVVHVVRCFADD 110 >gi|300115101|ref|YP_003761676.1| GTP-binding protein YchF [Nitrosococcus watsonii C-113] gi|299541038|gb|ADJ29355.1| GTP-binding protein YchF [Nitrosococcus watsonii C-113] Length = 362 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-------------- 208 GI+GLPN GKST ++T+A + +YPF T+ PN+G+V Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIEAQNYPFCTIDPNVGMVPMPDPRLDKIAAIVRPQQVLP 65 Query: 209 ---ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++ A QG G+G++FL H T + H+V E+ Sbjct: 66 TTMMFVDIAGLVAGASQGEGLGNQFLAHIRETEAIAHVVRCFEDQ 110 >gi|150024739|ref|YP_001295565.1| translation-associated GTPase [Flavobacterium psychrophilum JIP02/86] gi|149771280|emb|CAL42749.1| GTP-dependent nucleic acid-binding protein EngD [Flavobacterium psychrophilum JIP02/86] Length = 364 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G+V E +E + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNIGVVNVPDPRIEKLEELVKPERVQM 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + + ++H++ + + Sbjct: 64 ATVDIVDIAGLVKGASKGEGLGNQFLGNIRECNAIIHVLRCFDND 108 >gi|282165039|ref|YP_003357424.1| GTP-binding protein [Methanocella paludicola SANAE] gi|282157353|dbj|BAI62441.1| GTP-binding protein [Methanocella paludicola SANAE] Length = 397 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 20/105 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------VKEGY-------- 205 I + G PN GKSTF + T A +IA+YPFTT+ PNLG+ KE + Sbjct: 5 IALAGKPNCGKSTFFKAATLADVEIANYPFTTIKPNLGVSYVRAKCPCKELHLTCPKCSD 64 Query: 206 -KEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 + FI L D+ G++ AH+G G+G+ FL + ++H++ A Sbjct: 65 GERFIAVELLDVAGLVPEAHKGKGLGNAFLDDMRQAQAIIHVIDA 109 >gi|152992243|ref|YP_001357964.1| GTP-dependent nucleic acid-binding protein EngD [Sulfurovum sp. NBC37-1] gi|151424104|dbj|BAF71607.1| GTP-binding protein [Sulfurovum sp. NBC37-1] Length = 367 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-----------------KE 203 IG++GLPN GKST ++T+A+ + A+YPF T+ PN +V + Sbjct: 5 IGLVGLPNVGKSTTFNALTKAQNAESANYPFCTIEPNKAVVPVPDKRLDELSKIVNPERI 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G++K A +G G+G++FL + T V+LHIV E+ Sbjct: 65 QHSTLDFVDIAGLVKGASKGEGLGNKFLGNIRETEVILHIVRCFED 110 >gi|296488394|gb|DAA30507.1| GTP-binding protein 10 [Bos taurus] Length = 155 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 76/144 (52%), Gaps = 26/144 (18%) Query: 36 GGSGGRG-----------GDVWIQATS--NLNTLIDFRYQQHFKAQHGEKGMKRNRSGAK 82 GGSGG G GDVW+ A + L L D Q+ F A G G+K Sbjct: 25 GGSGGMGYPRLGGEGGKGGDVWVVAHNRMTLKQLKDKYPQKRFVAGEGANSRVSALKGSK 84 Query: 83 GEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYAN 142 G+D + VPVG V +E+G +I +L++E R+++A GG GG K TN P Sbjct: 85 GKDCEIPVPVGVSVTDENG-KIIGELNKEKDRLLVAEGGLGG------KLLTNFLP---- 133 Query: 143 PGILGQEKIIWLKLKLIADIGIIG 166 + GQ+++I L LKLIADIG++G Sbjct: 134 --LKGQKRVIHLDLKLIADIGLVG 155 >gi|307154902|ref|YP_003890286.1| GTP-binding protein YchF [Cyanothece sp. PCC 7822] gi|306985130|gb|ADN17011.1| GTP-binding protein YchF [Cyanothece sp. PCC 7822] Length = 363 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 GI+GLPN GKST F A V AK + A++PF T+ PN+G+V K E I+ Sbjct: 5 GIVGLPNVGKSTLFNALVANAKAEAANFPFCTIEPNVGVVSVPDERLEVLAKLSQSEKIV 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A QG G+G++FL + ++H+V +++ Sbjct: 65 PTRIEFVDIAGLVKGASQGEGLGNQFLANIREVDAIVHVVRCFDDD 110 >gi|257462235|ref|ZP_05626652.1| GTP-dependent nucleic acid-binding protein EngD [Fusobacterium sp. D12] gi|317059904|ref|ZP_07924389.1| GTP-binding protein [Fusobacterium sp. D12] gi|313685580|gb|EFS22415.1| GTP-binding protein [Fusobacterium sp. D12] Length = 364 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------------------ 202 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V Sbjct: 4 IGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNVGMVTVPDERLQALAKIIQPQRI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++K A QG G+G++FL + T + +V E ENV Sbjct: 64 VAATVEFV--DIAGLVKGAAQGEGLGNKFLSNIRSTAAICQVVRCFEDENV 112 >gi|91785329|ref|YP_560535.1| translation-associated GTPase [Burkholderia xenovorans LB400] gi|91689283|gb|ABE32483.1| Putative GTP-dependent nucleic acid-binding protein, EngD/YchF [Burkholderia xenovorans LB400] Length = 364 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 28/149 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++ A +G G+G++FL + T + H+V E ENV + L ++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENVIHVANKVDPLSDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 N+EL L+ + TV+ LAR Sbjct: 126 EVINTEL-------ALADLATVEK-ALAR 146 >gi|288925892|ref|ZP_06419822.1| GTP-binding protein YchF [Prevotella buccae D17] gi|288337316|gb|EFC75672.1| GTP-binding protein YchF [Prevotella buccae D17] Length = 367 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQSANFPFCTIEPNLGVITVPDERLNKLAELVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + ++H+V +++ Sbjct: 66 ATCEIVDIAGLVKGASKGEGLGNKFLGNIRECDAIIHVVRCFDDD 110 >gi|77164045|ref|YP_342570.1| translation-associated GTPase [Nitrosococcus oceani ATCC 19707] gi|254435771|ref|ZP_05049278.1| GTP-binding protein YchF [Nitrosococcus oceani AFC27] gi|76882359|gb|ABA57040.1| GTP-binding protein, HSR1-related protein [Nitrosococcus oceani ATCC 19707] gi|207088882|gb|EDZ66154.1| GTP-binding protein YchF [Nitrosococcus oceani AFC27] Length = 362 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-------------- 208 GI+GLPN GKST ++T+A + +YPF T+ PN+G+V Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIEAQNYPFCTIDPNVGMVPMPDPRLDKIAAIVRPQQVLP 65 Query: 209 ---ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++ A QG G+G++FL H T + H+V E+ Sbjct: 66 TTMMFVDIAGLVAGASQGEGLGNQFLAHIRETEAIAHVVRCFEDQ 110 >gi|50121110|ref|YP_050277.1| GTP-dependent nucleic acid-binding protein EngD [Pectobacterium atrosepticum SCRI1043] gi|49611636|emb|CAG75085.1| conserved hypothetical protein [Pectobacterium atrosepticum SCRI1043] Length = 363 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ + D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 EVINTEL-------ALSDLDTCE 141 >gi|315127049|ref|YP_004069052.1| translation-associated GTPase [Pseudoalteromonas sp. SM9913] gi|315015563|gb|ADT68901.1| translation-associated GTPase [Pseudoalteromonas sp. SM9913] Length = 363 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 31/145 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDELAKIVNPQRILT 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 EF+ DI G++K A +G G+G++FL + T + H+V E ENV I D Sbjct: 66 TSMEFV--DIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFEDENVIHVAGTIDPAD 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVD 285 ++ N+EL L+ +D+ D Sbjct: 124 DIDVINTELV-------LADMDSAD 141 >gi|288800501|ref|ZP_06405959.1| GTP-binding protein YchF [Prevotella sp. oral taxon 299 str. F0039] gi|288332714|gb|EFC71194.1| GTP-binding protein YchF [Prevotella sp. oral taxon 299 str. F0039] Length = 366 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIEPNVGVITVPDERLTKLAEIVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 + DI G++K A +G G+G++FL + T ++H++ E EN+ Sbjct: 66 ATCEIVDIAGLVKGASKGEGLGNKFLGNIRETDAIIHVLRCFEDENI 112 >gi|259908627|ref|YP_002648983.1| GTP-dependent nucleic acid-binding protein EngD [Erwinia pyrifoliae Ep1/96] gi|224964249|emb|CAX55756.1| Putative GTP-binding protein [Erwinia pyrifoliae Ep1/96] gi|283478599|emb|CAY74515.1| putative GTP-binding protein 9 [Erwinia pyrifoliae DSM 12163] gi|310767473|gb|ADP12423.1| GTP-dependent nucleic acid-binding protein EngD [Erwinia sp. Ejp617] Length = 363 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDSRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ + D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 DTINTEL-------ALSDLDTCE 141 >gi|333029551|ref|ZP_08457612.1| GTP-binding protein YchF [Bacteroides coprosuis DSM 18011] gi|332740148|gb|EGJ70630.1| GTP-binding protein YchF [Bacteroides coprosuis DSM 18011] Length = 366 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLNKLAELVHPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T ++H++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAIIHVLRCFDDD 110 >gi|302505691|ref|XP_003014552.1| hypothetical protein ARB_07114 [Arthroderma benhamiae CBS 112371] gi|291178373|gb|EFE34163.1| hypothetical protein ARB_07114 [Arthroderma benhamiae CBS 112371] Length = 248 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 67/114 (58%), Gaps = 2/114 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ +T+ K ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 75 ARISLVGFPSVGKSTFLSKITKTKSEVAAYSFTTLTAIPGVLEYGGSEIQILDLPGIIEG 134 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 A +G G G + + + + ++L ++ A ++ Q A + EL A L +++ Sbjct: 135 AAEGKGRGRQVISAAKTSDLILMVLDATKKAEQRA--LLEAELEAVGIRLNREV 186 >gi|15828636|ref|NP_325996.1| translation-associated GTPase [Mycoplasma pulmonis UAB CTIP] gi|14089578|emb|CAC13338.1| GTP-BINDING PROTEIN [Mycoplasma pulmonis] Length = 369 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKS+ +++T+ + A+Y FTT+ PN+ V K Y Sbjct: 7 GIVGLPNVGKSSLFSAITKKSVESANYAFTTIEPNIASVELIDKRLQKLAKLANSKKIIY 66 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G++ A +G G+G++FL + ++H+V E N Sbjct: 67 ATFDFVDIAGLVAGASKGEGLGNKFLANIREVDAIIHVVRCFENN 111 >gi|258405513|ref|YP_003198255.1| GTP-binding protein YchF [Desulfohalobium retbaense DSM 5692] gi|257797740|gb|ACV68677.1| GTP-binding protein YchF [Desulfohalobium retbaense DSM 5692] Length = 367 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 22/108 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 IGI+GLPN GKST ++T+A+ + A+YPF T+ PN IV Sbjct: 5 IGIVGLPNVGKSTLFNALTKAQNAQSANYPFCTIEPNKAIVPVPDSRVSALSELVKPQKT 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + EFI DI G++K A QG G+G++FL + + ++H+V ++ Sbjct: 65 IQATVEFI--DIAGLVKGASQGEGLGNQFLANIRESDAIMHVVRCFDD 110 >gi|218437238|ref|YP_002375567.1| GTP-dependent nucleic acid-binding protein EngD [Cyanothece sp. PCC 7424] gi|218169966|gb|ACK68699.1| GTP-binding protein YchF [Cyanothece sp. PCC 7424] Length = 363 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 GI+GLPN GKST F A V AK + A++PF T+ PN+G+V K E I+ Sbjct: 5 GIVGLPNVGKSTLFNALVANAKAEAANFPFCTIEPNVGVVSVPDERLEVLAKLSQSEKIV 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A QG G+G++FL + ++H+V +++ Sbjct: 65 PTRIEFVDIAGLVKGASQGEGLGNQFLANIREVDAIVHVVRCFDDD 110 >gi|85713255|ref|ZP_01044280.1| Predicted GTPase, probable translation factor [Idiomarina baltica OS145] gi|85692924|gb|EAQ30897.1| Predicted GTPase, probable translation factor [Idiomarina baltica OS145] Length = 363 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 31/145 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVAVPDPRLDVLESIVNPQKVIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 EF+ DI G++K A +G G+G++FL + T + H+V E +N+ I D Sbjct: 66 TTMEFV--DIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFEDDNIVHVSGGINPAD 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVD 285 ++ N+EL L+ +D+VD Sbjct: 124 DIDTINTEL-------ALADLDSVD 141 >gi|121606252|ref|YP_983581.1| GTP-dependent nucleic acid-binding protein EngD [Polaromonas naphthalenivorans CJ2] gi|120595221|gb|ABM38660.1| GTP-binding protein YchF [Polaromonas naphthalenivorans CJ2] Length = 363 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VKE 203 GI+GLPN GKST ++T+A +YPF T+ PN+GI V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLDALSAIVNPQKVQR 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A G G+G++FL H T ++++V E++ Sbjct: 66 AIVEFV--DIAGLVAGASTGEGLGNKFLAHIRETDAIVNVVRCFEDD 110 >gi|56460040|ref|YP_155321.1| GTP-dependent nucleic acid-binding protein EngD [Idiomarina loihiensis L2TR] gi|56179050|gb|AAV81772.1| Predicted GTPase, probable translation factor [Idiomarina loihiensis L2TR] Length = 363 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 31/145 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDKLAAIVNPERVIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 EF+ DI G++K A +G G+G++FL + T + H+V E +N+ I D Sbjct: 66 TTMEFV--DIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFEDDNIVHVSGGIDPAD 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVD 285 ++ N+EL L+ +D+VD Sbjct: 124 DIDTINTEL-------ALADLDSVD 141 >gi|257468851|ref|ZP_05632945.1| GTP-dependent nucleic acid-binding protein EngD [Fusobacterium ulcerans ATCC 49185] gi|317063101|ref|ZP_07927586.1| GTP-binding protein [Fusobacterium ulcerans ATCC 49185] gi|313688777|gb|EFS25612.1| GTP-binding protein [Fusobacterium ulcerans ATCC 49185] Length = 365 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------------------ 202 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V Sbjct: 4 IGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNVGMVTVPDKRLDQLSAIINPQRV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 + EFI DI G++K A +G G+G++FL + T + +V E ENV Sbjct: 64 VQATVEFI--DIAGLVKGAAKGEGLGNKFLSNIRTTAAICQVVRCFEDENV 112 >gi|326468595|gb|EGD92604.1| GTP-binding protein [Trichophyton tonsurans CBS 112818] gi|326479924|gb|EGE03934.1| hypothetical protein TEQG_02968 [Trichophyton equinum CBS 127.97] Length = 371 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 59/95 (62%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ +T+ K ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 65 ARISLVGFPSVGKSTFLSKITKTKSEVAAYSFTTLTAIPGVLEYGGSEIQILDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A ++ Q A Sbjct: 125 AAEGKGRGRQVISAAKTSDLILMVLDATKKAEQRA 159 >gi|169351713|ref|ZP_02868651.1| hypothetical protein CLOSPI_02494 [Clostridium spiroforme DSM 1552] gi|169291935|gb|EDS74068.1| hypothetical protein CLOSPI_02494 [Clostridium spiroforme DSM 1552] Length = 366 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T A+ + A+YPF T+ PN+G+V+ E E I Sbjct: 6 GIVGLPNVGKSTLFNAITNAQVEAANYPFATIDPNVGVVEVPDYRLEKLTELIKPKKTVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++K A +G G+G++FL + T + +V + Sbjct: 66 TTFGFTDIAGLVKGASRGEGLGNKFLGNIRETDAICEVVRCFRD 109 >gi|253688507|ref|YP_003017697.1| GTP-binding protein YchF [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755085|gb|ACT13161.1| GTP-binding protein YchF [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 363 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ + D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 DVINTEL-------ALSDLDTCE 141 >gi|145220320|ref|YP_001131029.1| translation-associated GTPase [Prosthecochloris vibrioformis DSM 265] gi|145206484|gb|ABP37527.1| GTP-binding protein YchF [Chlorobium phaeovibrioides DSM 265] Length = 363 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFI----------- 209 GI+GLPN GKST ++T + + A+YPF T+ PN+G +V + + I Sbjct: 6 GIVGLPNVGKSTLFNAITAKQAEAANYPFCTIEPNVGTVLVPDERMQLIANVVKTPTLVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G++K A +G G+G++FL H ++H++ ++ Sbjct: 66 TTLEIVDIAGLVKGASKGEGLGNQFLSHIREVDAIVHVIRCFDD 109 >gi|322832998|ref|YP_004213025.1| GTP-binding protein YchF [Rahnella sp. Y9602] gi|321168199|gb|ADW73898.1| GTP-binding protein YchF [Rahnella sp. Y9602] Length = 363 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ + D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 EVINTEL-------ALSDLDTCE 141 >gi|261821684|ref|YP_003259790.1| GTP-dependent nucleic acid-binding protein EngD [Pectobacterium wasabiae WPP163] gi|261605697|gb|ACX88183.1| GTP-binding protein YchF [Pectobacterium wasabiae WPP163] Length = 363 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ + D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 EVINTEL-------ALSDLDTCE 141 >gi|146311991|ref|YP_001177065.1| GTP-dependent nucleic acid-binding protein EngD [Enterobacter sp. 638] gi|145318867|gb|ABP61014.1| GTP-binding protein YchF [Enterobacter sp. 638] Length = 363 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ + D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 EVINTEL-------ALSDLDTCE 141 >gi|254293127|ref|YP_003059150.1| GTP-dependent nucleic acid-binding protein EngD [Hirschia baltica ATCC 49814] gi|254041658|gb|ACT58453.1| GTP-binding protein YchF [Hirschia baltica ATCC 49814] Length = 367 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 18/121 (14%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTADAQAANYPFCTIDPNEGEVAVPEKRLKALADIAGSKEII 65 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 A DI G++K A QG G+G++FL + T + +++ E++ +D +S Sbjct: 66 PARMNFVDIAGLVKGASQGEGLGNQFLANIRETDAIAYVLRCFEDDDVTHVSGTIDPMSD 125 Query: 265 Y 265 Y Sbjct: 126 Y 126 >gi|256831987|ref|YP_003160714.1| GTP-binding protein YchF [Jonesia denitrificans DSM 20603] gi|256685518|gb|ACV08411.1| GTP-binding protein YchF [Jonesia denitrificans DSM 20603] Length = 369 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 18/112 (16%) Query: 154 LKLKLIA-DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI--- 209 + L L+A IGI+GLPN GKST ++TRA+ A+YPF T+ PN+G+V + + Sbjct: 4 VDLPLVALTIGIVGLPNVGKSTLFNALTRAQVLAANYPFATIEPNVGVVPLPDERLVKLA 63 Query: 210 --------------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 DI GI++ A +G G+G++FL + + + A Sbjct: 64 EIFSSERILPATVSFVDIAGIVRGASEGEGLGNKFLANIREADAICQVTRAF 115 >gi|32266872|ref|NP_860904.1| GTP-dependent nucleic acid-binding protein EngD [Helicobacter hepaticus ATCC 51449] gi|32262924|gb|AAP77970.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 366 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV------------------- 201 IGI+GLPN GKST ++T+A+ + A+YPF T+ PN +V Sbjct: 5 IGIVGLPNVGKSTTFNALTKAQNAEAANYPFCTIEPNKAVVSVPDVRLQELAKIVNPQKI 64 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + EF+ DI G+++ A +G G+G++FL + + +++LHIV E++ Sbjct: 65 QHSVVEFV--DIAGLVRGASKGEGLGNQFLANIKECNMILHIVRCFEDS 111 >gi|332520467|ref|ZP_08396929.1| GTP-binding protein YchF [Lacinutrix algicola 5H-3-7-4] gi|332043820|gb|EGI80015.1| GTP-binding protein YchF [Lacinutrix algicola 5H-3-7-4] Length = 364 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G+V + + + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNIGVVNVPDPRLQKLESLVNPERVIP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T +LH++ + + Sbjct: 64 ATVEIVDIAGLVKGASKGEGLGNQFLANIRETDAILHVLRCFDND 108 >gi|294055134|ref|YP_003548792.1| GTP-binding protein YchF [Coraliomargarita akajimensis DSM 45221] gi|293614467|gb|ADE54622.1| GTP-binding protein YchF [Coraliomargarita akajimensis DSM 45221] Length = 367 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------EGYKEFI------ 209 GI+GLPN GKST ++TR K + A+YPF T+ PN+G+V+ E +E Sbjct: 5 GIVGLPNVGKSTLFNALTRTRKAESANYPFCTIDPNVGVVQVPDERLEPLREIAKTDKVI 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H+V E++ Sbjct: 65 PAAIEFVDIAGLVEGASKGEGLGNKFLANIREVDAIVHVVRCFEDD 110 >gi|209363662|ref|YP_001423506.2| GTP-dependent nucleic acid-binding protein EngD [Coxiella burnetii Dugway 5J108-111] gi|212211870|ref|YP_002302806.1| GTP-dependent nucleic acid-binding protein EngD [Coxiella burnetii CbuG_Q212] gi|212217815|ref|YP_002304602.1| GTP-dependent nucleic acid-binding protein EngD [Coxiella burnetii CbuK_Q154] gi|207081595|gb|ABS77671.2| GTP-binding protein, probable translation factor [Coxiella burnetii Dugway 5J108-111] gi|212010280|gb|ACJ17661.1| GTP-binding protein, probable translation factor [Coxiella burnetii CbuG_Q212] gi|212012077|gb|ACJ19457.1| GTP-binding protein, probable translation factor [Coxiella burnetii CbuK_Q154] Length = 367 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + ++YPF T+ PN+G+V E + + Sbjct: 10 GIVGLPNVGKSTLFNALTKAGIEASNYPFCTIEPNVGVVSVPDKRLEKIAQIVNPKQIIP 69 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++ A +G G+G++FL + T + H+V + ENV I + ++ Sbjct: 70 TTVNFVDIAGLVAGASKGEGLGNQFLANIRETQAIAHVVRCFQDENVTHVAGSINPIADI 129 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL L+ ++T+D Sbjct: 130 EVVNTEL-------ALADLETLD 145 >gi|215919269|ref|NP_820821.2| GTP-dependent nucleic acid-binding protein EngD [Coxiella burnetii RSA 493] gi|206584153|gb|AAO91335.2| GTP-binding protein, probable translation factor [Coxiella burnetii RSA 493] Length = 367 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + ++YPF T+ PN+G+V E + + Sbjct: 10 GIVGLPNVGKSTLFNALTKAGIEASNYPFCTIEPNVGVVSVPDKRLEKIAQIVNPKQIIP 69 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++ A +G G+G++FL + T + H+V + ENV I + ++ Sbjct: 70 TTVNFVDIAGLVAGASKGEGLGNQFLANIRETQAIAHVVRCFQDENVTHVAGSINPIADI 129 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL L+ ++T+D Sbjct: 130 EVVNTEL-------ALADLETLD 145 >gi|206581061|ref|YP_002237899.1| GTP-binding protein EngD [Klebsiella pneumoniae 342] gi|288934812|ref|YP_003438871.1| GTP-binding protein YchF [Klebsiella variicola At-22] gi|290508955|ref|ZP_06548326.1| GTP-binding protein YchF [Klebsiella sp. 1_1_55] gi|206570119|gb|ACI11895.1| GTP-binding protein EngD [Klebsiella pneumoniae 342] gi|288889521|gb|ADC57839.1| GTP-binding protein YchF [Klebsiella variicola At-22] gi|289778349|gb|EFD86346.1| GTP-binding protein YchF [Klebsiella sp. 1_1_55] Length = 364 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ + D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 DVINTEL-------ALSDLDTCE 141 >gi|326330999|ref|ZP_08197298.1| GTP-binding protein YchF [Nocardioidaceae bacterium Broad-1] gi|325951210|gb|EGD43251.1| GTP-binding protein YchF [Nocardioidaceae bacterium Broad-1] Length = 357 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV---KEGYKEFI--------- 209 IGI+GLPNAGKST ++T+ A+YPF T+ PN+G+V E E Sbjct: 5 IGIVGLPNAGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDERLAELAKIYGSQKLL 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI++ A QG G+G++FL H + + + ++ Sbjct: 65 PATVQFVDIAGIVRGASQGEGLGNKFLSHIRESDAICQVTRVFRDD 110 >gi|213962205|ref|ZP_03390469.1| GTP-binding protein YchF [Capnocytophaga sputigena Capno] gi|213955211|gb|EEB66529.1| GTP-binding protein YchF [Capnocytophaga sputigena Capno] Length = 363 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG+V E + + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNLGVVNVPDPRLEKLETLVKPERVLP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + + ++H++ E + Sbjct: 64 ATVEIVDIAGLVKGASKGEGLGNQFLGNIRECNAIIHVLRCFEND 108 >gi|227329558|ref|ZP_03833582.1| translation-associated GTPase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 363 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ + D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 EVINTEL-------ALSDLDTCE 141 >gi|119356254|ref|YP_910898.1| GTP-dependent nucleic acid-binding protein EngD [Chlorobium phaeobacteroides DSM 266] gi|119353603|gb|ABL64474.1| GTP-binding protein YchF [Chlorobium phaeobacteroides DSM 266] Length = 363 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV---KEGYKEFI---------- 209 GI+GLPN GKST ++T + + A+YPF T+ PN+G V E ++ Sbjct: 6 GIVGLPNVGKSTLFNAITAKQAEAANYPFCTIEPNVGTVLVPDERMQQIANVVKTPTLVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL H ++H+V +++ Sbjct: 66 ATLEIVDIAGLVKGASKGEGLGNQFLSHIREVDAIVHVVRCFDDS 110 >gi|283832843|ref|ZP_06352584.1| GTP-binding protein YchF [Citrobacter youngae ATCC 29220] gi|291071444|gb|EFE09553.1| GTP-binding protein YchF [Citrobacter youngae ATCC 29220] Length = 364 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ + D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFESDNIIHVNNKVDPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 DVINTEL-------ALSDLDTCE 141 >gi|282858639|ref|ZP_06267797.1| GTP-binding protein YchF [Prevotella bivia JCVIHMP010] gi|282588557|gb|EFB93704.1| GTP-binding protein YchF [Prevotella bivia JCVIHMP010] Length = 367 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG++ E I Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIEPNLGVITVPDERLNKLAEIIHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + ++H++ +++ Sbjct: 66 ATCEIVDIAGLVKGASKGEGLGNKFLGNIRECDAIIHVIRCFDDD 110 >gi|261340159|ref|ZP_05968017.1| GTP-binding protein YchF [Enterobacter cancerogenus ATCC 35316] gi|288317674|gb|EFC56612.1| GTP-binding protein YchF [Enterobacter cancerogenus ATCC 35316] Length = 364 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ + D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 DVINTEL-------ALSDLDTCE 141 >gi|218296371|ref|ZP_03497114.1| GTP-binding protein YchF [Thermus aquaticus Y51MC23] gi|218243165|gb|EED09696.1| GTP-binding protein YchF [Thermus aquaticus Y51MC23] Length = 368 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 25/106 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +GI+GLPN GKST ++TRA A+YPF T+ N+G+V Sbjct: 4 VGIVGLPNVGKSTLFNALTRAGALAANYPFATIDKNVGVVALEDPRLYALQKTFARGERL 63 Query: 203 ----EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + EF+ DI G++K AH+G G+G++FL H + H+V Sbjct: 64 PPVIPTHVEFV--DIAGLVKGAHKGEGLGNQFLAHIREVAAIAHVV 107 >gi|157370224|ref|YP_001478213.1| GTP-dependent nucleic acid-binding protein EngD [Serratia proteamaculans 568] gi|157321988|gb|ABV41085.1| GTP-binding protein YchF [Serratia proteamaculans 568] Length = 363 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDSRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ + D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 EVINTEL-------ALSDLDTCE 141 >gi|319938348|ref|ZP_08012743.1| translation-associated GTPase [Coprobacillus sp. 29_1] gi|319806436|gb|EFW03100.1| translation-associated GTPase [Coprobacillus sp. 29_1] Length = 366 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T A+ + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITNAQVEAANYPFATIDPNVGVVEVPDHRLEELTKICKPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F DI G++K A +G G+G++FL + T + +V + Sbjct: 66 TTFEFTDIAGLVKGASRGEGLGNKFLANIRETDAICEVVRCFRD 109 >gi|300716377|ref|YP_003741180.1| GTP-binding protein [Erwinia billingiae Eb661] gi|299062213|emb|CAX59330.1| Putative GTP-binding protein [Erwinia billingiae Eb661] Length = 363 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 31/145 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDSRLDQLAAIVKPQRILP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 EF+ DI G++K A +G G+G++FL + T + H+V E +N+ + D Sbjct: 66 TTMEFV--DIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPAD 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVD 285 ++ N+EL LS +DT + Sbjct: 124 DIETINTEL-------ALSDLDTCE 141 >gi|255630935|gb|ACU15830.1| unknown [Glycine max] Length = 188 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST F A V K + A++PF T+ PN+GIV Sbjct: 57 GIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVAVPDSRLHVLSDLSKSQRAV 116 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QG G+G++FL H +L +V E+N Sbjct: 117 PASIEFV--DIAGLVKGASQGEGLGNKFLSHIREVDSILQVVRCFEDN 162 >gi|154149525|ref|YP_001406605.1| translation-associated GTPase [Campylobacter hominis ATCC BAA-381] gi|153805534|gb|ABS52541.1| GTP-binding protein YchF [Campylobacter hominis ATCC BAA-381] Length = 367 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 19/109 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIV-----------------KE 203 +GI+GLPN GKST ++T+A+ +A +YPF T+ PN IV K Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAVAQNYPFCTIEPNKAIVAVPDNRLNELAKIVNPGKI 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 + DI G++K A +G G+G++FL + + ++LHIV +EN+ Sbjct: 65 VHSTIEFVDIAGLVKGASKGEGLGNKFLSNIRESEIILHIVRCFDDENI 113 >gi|256374885|ref|YP_003098545.1| GTP-dependent nucleic acid-binding protein EngD [Actinosynnema mirum DSM 43827] gi|255919188|gb|ACU34699.1| GTP-binding protein YchF [Actinosynnema mirum DSM 43827] Length = 359 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++TR A+YPF T+ PN+G+V +E Sbjct: 5 LGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGVVPLPDARLGKLAEVFGSEREV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +GAG+G++FL + + + +V +++ Sbjct: 65 PAVVSFVDIAGIVKGASEGAGLGNKFLANIREANAICQVVRVFDDS 110 >gi|145630434|ref|ZP_01786215.1| GTP-binding protein [Haemophilus influenzae R3021] gi|144984169|gb|EDJ91606.1| GTP-binding protein [Haemophilus influenzae R3021] Length = 363 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTEAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + LD++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 DTINTEL 132 >gi|291286019|ref|YP_003502835.1| GTP-binding protein YchF [Denitrovibrio acetiphilus DSM 12809] gi|290883179|gb|ADD66879.1| GTP-binding protein YchF [Denitrovibrio acetiphilus DSM 12809] Length = 364 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFIL-------- 210 + GI+GLPN GKST ++T+A + A+YPF T+ PN GIV + ++FI+ Sbjct: 4 NCGIVGLPNVGKSTIFNALTKAGAESANYPFCTIDPNKGIVPVLDDRQDFIIQYVKPKSV 63 Query: 211 -------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 DI G++K A +G G+G++FL + + + H+V + Sbjct: 64 VRTTIEFVDIAGLVKGASKGEGLGNQFLTNIRQVDAVAHVVRCFD 108 >gi|237731791|ref|ZP_04562272.1| translation-associated GTPase [Citrobacter sp. 30_2] gi|226907330|gb|EEH93248.1| translation-associated GTPase [Citrobacter sp. 30_2] Length = 364 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ + D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 EVINTEL-------ALSDLDTCE 141 >gi|307564742|ref|ZP_07627270.1| GTP-binding protein YchF [Prevotella amnii CRIS 21A-A] gi|307346464|gb|EFN91773.1| GTP-binding protein YchF [Prevotella amnii CRIS 21A-A] Length = 367 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG++ E I Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIEPNLGVITVPDERLNKLAEIIHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + ++H++ +++ Sbjct: 66 ATCEIVDIAGLVKGASKGEGLGNKFLGNIRECDAIIHVIRCFDDD 110 >gi|295095630|emb|CBK84720.1| GTP-binding protein YchF [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 364 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ + D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 DVINTEL-------ALSDLDTCE 141 >gi|270261419|ref|ZP_06189692.1| hypothetical protein SOD_a06510 [Serratia odorifera 4Rx13] gi|270044903|gb|EFA17994.1| hypothetical protein SOD_a06510 [Serratia odorifera 4Rx13] Length = 363 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ + D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 EVINTEL-------ALSDLDTCE 141 >gi|307822833|ref|ZP_07653064.1| GTP-binding protein YchF [Methylobacter tundripaludum SV96] gi|307736437|gb|EFO07283.1| GTP-binding protein YchF [Methylobacter tundripaludum SV96] Length = 363 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++TRAK +YPF T+ PN+G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTRAKIAAENYPFCTIDPNVGVVPVPDSRMDKLAEIVKPERMLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL + T + H+V +++ Sbjct: 66 TTIEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFQDD 110 >gi|254430116|ref|ZP_05043819.1| GTP-binding protein YchF [Cyanobium sp. PCC 7001] gi|197624569|gb|EDY37128.1| GTP-binding protein YchF [Cyanobium sp. PCC 7001] Length = 363 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V A+ + A+YPF T+ PN G+V KE I Sbjct: 5 GIVGLPNVGKSTLFNALVANAQAEAANYPFCTIEPNSGVVAVPDPRLQQLATISRSKEII 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A QG G+G++FL + ++H+V +++ Sbjct: 65 PTRVEFVDIAGLVKGASQGEGLGNKFLANIREVDAIVHVVRCFDDD 110 >gi|119897043|ref|YP_932256.1| GTP-dependent nucleic acid-binding protein EngD [Azoarcus sp. BH72] gi|119669456|emb|CAL93369.1| conserved hypothetical protein [Azoarcus sp. BH72] Length = 363 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVEVPDPRLAALSEIVKPQKIQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++H+V ++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVHVVRCFADD 110 >gi|224055102|ref|XP_002198993.1| PREDICTED: Obg-like ATPase 1 [Taeniopygia guttata] Length = 396 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 22/145 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T+++ ++PF T+ PN V F Sbjct: 25 IGIVGLPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDDRFDFLCQYHKPPSKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILD 260 + DI G++K AH G G+G+ FL H + H++ A E++ V+ + + D Sbjct: 85 PAFLNVVDIAGLVKGAHTGQGLGNSFLSHINACDGIFHLMRAFEDDDITHVEGSVDPVRD 144 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVD 285 + + ELR K E + + ID ++ Sbjct: 145 -IEIIHEELRLKDEELIMQSIDKLE 168 >gi|299783055|gb|ADJ41053.1| GTP-binding protein [Lactobacillus fermentum CECT 5716] Length = 233 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 72/124 (58%), Gaps = 8/124 (6%) Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---EL 262 ++F +AD+PG+I A +G G+G +FL+H ERT VLLH+V ++ + A + D EL Sbjct: 6 RDFAMADMPGLINGASKGVGLGLQFLRHIERTRVLLHLVDLGNQDAELALEKFHDINKEL 65 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP-----FEFSSITGHGIPQ 317 ++Y+ EL K+ +IV +++D ++ + +L +P F S++T G+ + Sbjct: 66 ASYDPELLKRPQIVVATKMDLPEAQEHLDEFKKLLEADDTLPETPQVFAISAVTHAGVQE 125 Query: 318 ILEC 321 +++ Sbjct: 126 LMQT 129 >gi|227111322|ref|ZP_03824978.1| translation-associated GTPase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 223 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ + D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 EVINTEL-------ALSDLDTCE 141 >gi|153206137|ref|ZP_01945400.1| GTP-binding protein YchF [Coxiella burnetii 'MSU Goat Q177'] gi|165918216|ref|ZP_02218302.1| GTP-binding protein YchF [Coxiella burnetii RSA 334] gi|120577267|gb|EAX33891.1| GTP-binding protein YchF [Coxiella burnetii 'MSU Goat Q177'] gi|165918076|gb|EDR36680.1| GTP-binding protein YchF [Coxiella burnetii RSA 334] Length = 363 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + ++YPF T+ PN+G+V E + + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEASNYPFCTIEPNVGVVSVPDKRLEKIAQIVNPKQIIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++ A +G G+G++FL + T + H+V + ENV I + ++ Sbjct: 66 TTVNFVDIAGLVAGASKGEGLGNQFLANIRETQAIAHVVRCFQDENVTHVAGSINPIADI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL L+ ++T+D Sbjct: 126 EVVNTEL-------ALADLETLD 141 >gi|320590182|gb|EFX02625.1| GTP-binding protein [Grosmannia clavigera kw1407] Length = 371 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ VT+ + ++A Y FTTL G++ G E L D+PGII+ Sbjct: 65 ARIALVGFPSVGKSTFLSKVTKTRSEVAAYAFTTLTAIPGVLSYGGAEIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + +++ ++ A ++ Q A Sbjct: 125 AAEGKGRGRQVISAAKTSDMIMMVLDATKKAEQRA 159 >gi|261415004|ref|YP_003248687.1| GTP-binding protein YchF [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371460|gb|ACX74205.1| GTP-binding protein YchF [Fibrobacter succinogenes subsp. succinogenes S85] gi|302328048|gb|ADL27249.1| GTP-binding protein YchF [Fibrobacter succinogenes subsp. succinogenes S85] Length = 365 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T A + A+YPF T+ PN+G+V Sbjct: 6 GIVGLPNVGKSTIFNAITNAGAESANYPFCTIDPNVGMVSVPDARLDELVKVYNPKSIVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL H ++ +V +EN+ Sbjct: 66 AVTEFV--DIAGLVKGASKGEGLGNQFLTHIRECEAIMEVVRCFDDENI 112 >gi|52550524|gb|AAU84373.1| predicted GTPase probable translation factor [uncultured archaeon GZfos9D8] Length = 415 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 28/112 (25%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI----VK--------------- 202 I I G PN+GKSTF + T A +IA YPFTT+ PN+G+ VK Sbjct: 4 IAIAGKPNSGKSTFFKAATLADVEIASYPFTTISPNVGVAYVRVKCPCKDKTIQQEIGRE 63 Query: 203 -----EGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 +G++ F+ L D+ G+++ AH+G G+G+ FL + ++H+V A Sbjct: 64 CGNCVDGFR-FVPVELMDVAGLVRGAHEGRGLGNEFLDELRQAEAIIHVVDA 114 >gi|253581838|ref|ZP_04859062.1| GTP-binding protein [Fusobacterium varium ATCC 27725] gi|251836187|gb|EES64724.1| GTP-binding protein [Fusobacterium varium ATCC 27725] Length = 365 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------------------ 202 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V Sbjct: 4 IGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNVGMVTVPDKRLEQLSAIINPQRV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 + EFI DI G++K A +G G+G++FL + T + +V E ENV Sbjct: 64 VQATVEFI--DIAGLVKGAAKGEGLGNKFLSNIRTTAAICQVVRCFEDENV 112 >gi|311747692|ref|ZP_07721477.1| GTP-binding protein YchF [Algoriphagus sp. PR1] gi|126575680|gb|EAZ79990.1| GTP-binding protein YchF [Algoriphagus sp. PR1] Length = 365 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK---------------- 206 GI+GLPN GKST +++ AK + A++PF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNALSSAKAEAANFPFCTIEPNVGVVTVPDKRLQILEGLVSPQRVLP 65 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL + ++H++ +EN+ Sbjct: 66 TVIEFV--DIAGLVKGASKGEGLGNKFLANIREVDAVIHVIRCFDDENI 112 >gi|118475641|ref|YP_892324.1| GTP-dependent nucleic acid-binding protein EngD [Campylobacter fetus subsp. fetus 82-40] gi|118414867|gb|ABK83287.1| GTP-binding protein YchF [Campylobacter fetus subsp. fetus 82-40] Length = 367 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 18/107 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIV-----------------KE 203 +GI+GLPN GKST ++T+A + A+YPF T+ PN IV K Sbjct: 5 VGIVGLPNVGKSTTFNALTKASNAESANYPFCTIEPNKAIVPVPDIRLNELAKIVNPNKI 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T V+LH+V +++ Sbjct: 65 QHSTIEFVDIAGLVKGASKGEGLGNKFLSNIRETEVILHMVRCFDDS 111 >gi|161831564|ref|YP_001597666.1| GTP-dependent nucleic acid-binding protein EngD [Coxiella burnetii RSA 331] gi|161763431|gb|ABX79073.1| GTP-binding protein YchF [Coxiella burnetii RSA 331] Length = 363 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + ++YPF T+ PN+G+V E + + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEASNYPFCTIEPNVGVVSVPDKRLEKIAQIVNPKQIIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++ A +G G+G++FL + T + H+V + ENV I + ++ Sbjct: 66 TTVNFVDIAGLVAGASKGEGLGNQFLANIRETQAIAHVVRCFQDENVTHVAGSINPIADI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL L+ ++T+D Sbjct: 126 EVVNTEL-------ALADLETLD 141 >gi|124268350|ref|YP_001022354.1| putative GTP-binding protein [Methylibium petroleiphilum PM1] gi|124261125|gb|ABM96119.1| putative GTP-binding protein [Methylibium petroleiphilum PM1] Length = 364 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVELPDPRLQALAAIVVPEKLVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++ A QG G+G++FL H T ++++V +ENV Sbjct: 66 AIVEFV--DIAGLVAGASQGEGLGNQFLAHIRETDAIVNVVRCFDDENV 112 >gi|257076708|ref|ZP_05571069.1| translation-associated GTPase [Ferroplasma acidarmanus fer1] Length = 391 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 29/137 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IG+IG PNAGKST +++T IA+YPFTT+ PN+GI +EG Sbjct: 4 IGLIGKPNAGKSTLFSAITSIDVDIANYPFTTIKPNVGISFVKDKCPENEINAKCNPREG 63 Query: 205 -------YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA-----LEENVQ 252 Y + D+PG+I+ A +G G+G+ FL + +++++ A +E N Sbjct: 64 KCLDGIRYIPVEIIDVPGLIEGASEGKGMGNEFLDNIRDADLIINLFDASGMTDMEGNPS 123 Query: 253 AAYQCILDELSAYNSEL 269 + LD++ N+E+ Sbjct: 124 ESGHDPLDDIKFVNNEI 140 >gi|222823683|ref|YP_002575257.1| predicted GTP-binding protein (DUF933 domain protein) [Campylobacter lari RM2100] gi|222538905|gb|ACM64006.1| conserved hypothetical protein, predicted GTP-binding protein (DUF933 domain protein) [Campylobacter lari RM2100] Length = 366 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-------KEGYK------- 206 +GI+GLPN GKST ++TRA+ + A+YPF T+ PN +V KE K Sbjct: 5 VGIVGLPNVGKSTTFNALTRAQNAESANYPFCTIEPNKAVVPVPDHRLKELAKIVNPQKI 64 Query: 207 -----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++ A +G G+G++FL + T ++LHIV +EN+ Sbjct: 65 IRSNIEFV--DIAGLVAGASKGEGLGNKFLSNIRETEMILHIVRCFDDENI 113 >gi|289178822|gb|ADC86068.1| GTP-binding protein [Bifidobacterium animalis subsp. lactis BB-12] Length = 380 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 IGI+GLPN GKST ++TR +YPF T+ PN GIV K +LA Sbjct: 21 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDKRLPVLAELVHTDKIV 80 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A E++ Sbjct: 81 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDD 126 >gi|119181819|ref|XP_001242092.1| hypothetical protein CIMG_05988 [Coccidioides immitis RS] Length = 361 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ +T+ K ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 65 ARISLVGFPSVGKSTFLSKITKTKSEVAAYSFTTLTAIPGVLEYGGAEIQVLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 125 ASEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA 159 >gi|118594521|ref|ZP_01551868.1| hypothetical protein MB2181_02595 [Methylophilales bacterium HTCC2181] gi|118440299|gb|EAV46926.1| hypothetical protein MB2181_02595 [Methylophilales bacterium HTCC2181] Length = 361 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T+A +YPF T+ PN+GIV + Sbjct: 4 GIVGLPNVGKSTLFNAITKAGIDANNYPFCTIEPNVGIVEVPDPRIGMLSEIVNPEKIQP 63 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+++ A +G G+G++FL + T +LH+V ++ Sbjct: 64 AIVEFV--DIAGLVEGASKGEGLGNKFLANIRETDAILHVVRCFNDD 108 >gi|23336255|ref|ZP_00121479.1| COG0012: Predicted GTPase, probable translation factor [Bifidobacterium longum DJO10A] gi|23465499|ref|NP_696102.1| GTP-dependent nucleic acid-binding protein EngD [Bifidobacterium longum NCC2705] gi|189439530|ref|YP_001954611.1| GTP-dependent nucleic acid-binding protein EngD [Bifidobacterium longum DJO10A] gi|23326156|gb|AAN24738.1| widely conserved hypothetical GTPase-like protein [Bifidobacterium longum NCC2705] gi|189427965|gb|ACD98113.1| Putative GTPase [Bifidobacterium longum DJO10A] Length = 364 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 IGI+GLPN GKST ++TR +YPF T+ PN GIV K +LA Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDKRLPVLAKLVHTEKVV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A E++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDD 110 >gi|310287670|ref|YP_003938928.1| translation-associated GTPase [Bifidobacterium bifidum S17] gi|309251606|gb|ADO53354.1| translation-associated GTPase [Bifidobacterium bifidum S17] Length = 366 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 IGI+GLPN GKST ++TR +YPF T+ PN GIV K +LA Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDKRLPVLAELVHTEKIV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A E++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDD 110 >gi|315048379|ref|XP_003173564.1| GTP-binding protein 1 [Arthroderma gypseum CBS 118893] gi|311341531|gb|EFR00734.1| GTP-binding protein 1 [Arthroderma gypseum CBS 118893] Length = 406 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ +T+ K ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 101 ARISLVGFPSVGKSTFLSKITKTKSEVAAYSFTTLTAIPGVLEYGGSEIQILDLPGIIEG 160 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 161 AAEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA 195 >gi|301631035|ref|XP_002944615.1| PREDICTED: GTP-dependent nucleic acid-binding protein engD-like [Xenopus (Silurana) tropicalis] Length = 364 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A A+YPF T+ PN G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANYPFCTIEPNTGVVEVPDPRLAALSAVVQPERVVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL H T ++++V E+ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFED 109 >gi|269797388|ref|YP_003311288.1| GTP-binding protein YchF [Veillonella parvula DSM 2008] gi|269094017|gb|ACZ24008.1| GTP-binding protein YchF [Veillonella parvula DSM 2008] Length = 368 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 17/106 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA-------- 211 ++GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V +LA Sbjct: 6 EVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVDVPDNRLAVLAEMFSSKRI 65 Query: 212 --------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+++ A +G G+G++FL H + + ++ ++ Sbjct: 66 LPAAMRFVDIAGLVEGASKGEGLGNKFLSHIRQVDAIAQVIRCFDD 111 >gi|224283299|ref|ZP_03646621.1| translation-associated GTPase [Bifidobacterium bifidum NCIMB 41171] gi|311064567|ref|YP_003971292.1| GTP-binding protein, probable translation factor [Bifidobacterium bifidum PRL2010] gi|313140450|ref|ZP_07802643.1| translation-associated GTPase [Bifidobacterium bifidum NCIMB 41171] gi|310866886|gb|ADP36255.1| GTP-binding protein, probable translation factor [Bifidobacterium bifidum PRL2010] gi|313132960|gb|EFR50577.1| translation-associated GTPase [Bifidobacterium bifidum NCIMB 41171] Length = 364 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 IGI+GLPN GKST ++TR +YPF T+ PN GIV K +LA Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDKRLPVLAELVHTEKIV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A E++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDD 110 >gi|293391724|ref|ZP_06636058.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952258|gb|EFE02377.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans D7S-1] Length = 363 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------KEGYKEFI------- 209 GI+GLPN GKST ++T+A+ + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKARIEAANYPFCTIEPNTGVVLMPDPRLDALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + L+++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLNDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 DTINTEL 132 >gi|296453959|ref|YP_003661102.1| GTP-binding protein YchF [Bifidobacterium longum subsp. longum JDM301] gi|296183390|gb|ADH00272.1| GTP-binding protein YchF [Bifidobacterium longum subsp. longum JDM301] Length = 364 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 IGI+GLPN GKST ++TR +YPF T+ PN GIV K +LA Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDKRLPVLAKLVHTEKVV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A E++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDD 110 >gi|296243071|ref|YP_003650558.1| hypothetical protein Tagg_1345 [Thermosphaera aggregans DSM 11486] gi|296095655|gb|ADG91606.1| GTP-binding conserved hypothetical protein TIGR00650 [Thermosphaera aggregans DSM 11486] Length = 406 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 31/139 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI---------VKEGYKE----- 207 IGI+G N GKST +++T KIAD+PFTT+ PN+G+ V+ G K+ Sbjct: 8 IGIVGKTNVGKSTLFSAITMVPVKIADHPFTTIEPNIGVGYVRVPCVHVELGLKQCNPRS 67 Query: 208 --------FI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA-----LEEN- 250 FI L D+ G+I A +G G+G++F+ + VL+H+V A LE N Sbjct: 68 GFCIRGFRFIPVKLMDVAGLIPGASRGRGLGNKFMDDLRQADVLIHVVDASGGTDLEGNP 127 Query: 251 VQAAYQCILDELSAYNSEL 269 V+ Q L+E+ E+ Sbjct: 128 VKPGTQDPLEEVELIRREI 146 >gi|110591190|pdb|2DBY|A Chain A, Crystal Structure Of The Gtp-Binding Protein Ychf In Complexed With Gdp Length = 368 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 25/106 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +GI+GLPN GKST ++TRA A+YPF T+ N+G+V Sbjct: 4 VGIVGLPNVGKSTLFNALTRANALAANYPFATIDKNVGVVPLEDERLYALQRTFAKGERV 63 Query: 203 ----EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + EF+ DI G++K AH+G G+G++FL H + H++ Sbjct: 64 PPVVPTHVEFV--DIAGLVKGAHKGEGLGNQFLAHIREVAAIAHVL 107 >gi|33519804|ref|NP_878636.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus Blochmannia floridanus] gi|33504149|emb|CAD83411.1| predicted GTPase; probable translation factor [Candidatus Blochmannia floridanus] Length = 348 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-----------------EGY 205 IIGLPN GKST + +T KI+++PF T+ PN+ I+K + Sbjct: 6 SIIGLPNVGKSTLFSLLTNIVVKISNFPFCTIQPNIAIIKIPDVRLYQLNDIVQSRTVVH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 ++ D+ G+I A+QG G+G + L H + T + +H+V + + Sbjct: 66 EKIKFIDVAGLIPGAYQGVGLGMQILNHIQTTQIFIHVVRCFDND 110 >gi|320458709|dbj|BAJ69330.1| GTPase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 366 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 IGI+GLPN GKST ++TR +YPF T+ PN GIV K +LA Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDKRLPVLAKLVHTEKVV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A E++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDD 110 >gi|299770489|ref|YP_003732515.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter sp. DR1] gi|298700577|gb|ADI91142.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter sp. DR1] gi|325121927|gb|ADY81450.1| translation-associated GTPase [Acinetobacter calcoaceticus PHEA-2] Length = 363 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 31/155 (20%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVKPQRI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI-- 258 EF+ DI G++ A +G G+G++FL + T + H+V E ENV I Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKIDP 121 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 LD+++ N+EL L+ ++TV L K Sbjct: 122 LDDIATINTEL-------ALADLETVAKAILRLTK 149 >gi|55981154|ref|YP_144451.1| GTP-dependent nucleic acid-binding protein EngD [Thermus thermophilus HB8] gi|134104154|pdb|2DWQ|A Chain A, Thermus Thermophilus Ychf Gtp-Binding Protein gi|134104155|pdb|2DWQ|B Chain B, Thermus Thermophilus Ychf Gtp-Binding Protein gi|55772567|dbj|BAD71008.1| GTP-binding protein [Thermus thermophilus HB8] Length = 368 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 25/106 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +GI+GLPN GKST ++TRA A+YPF T+ N+G+V Sbjct: 4 VGIVGLPNVGKSTLFNALTRANALAANYPFATIDKNVGVVPLEDERLYALQRTFAKGERV 63 Query: 203 ----EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + EF+ DI G++K AH+G G+G++FL H + H++ Sbjct: 64 PPVVPTHVEFV--DIAGLVKGAHKGEGLGNQFLAHIREVAAIAHVL 107 >gi|282891998|ref|ZP_06300475.1| hypothetical protein pah_c205o012 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498040|gb|EFB40382.1| hypothetical protein pah_c205o012 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 364 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFIL 210 GI+GLPN GKST ++T K ++YPF T+ PN+GIV+ K+ I Sbjct: 7 GIVGLPNVGKSTLFNALTANKAAASNYPFCTIDPNIGIVEVQDPRLNVLSGLSHSKKIIP 66 Query: 211 A-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI G++ A +G G+G++FL + T ++H+V E + Sbjct: 67 ASMQFVDIAGLVAGASKGEGLGNKFLANIRETDAIVHVVRCFESS 111 >gi|296809135|ref|XP_002844906.1| GTP-binding protein 1 [Arthroderma otae CBS 113480] gi|238844389|gb|EEQ34051.1| GTP-binding protein 1 [Arthroderma otae CBS 113480] Length = 363 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ +T+ K ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 60 ARISLVGFPSVGKSTFLSKITKTKSEVAAYSFTTLTAIPGVLEYGGSEIQILDLPGIIEG 119 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 120 AAEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA 154 >gi|332532470|ref|ZP_08408348.1| GTP-binding and nucleic acid-binding protein YchF [Pseudoalteromonas haloplanktis ANT/505] gi|332038113|gb|EGI74560.1| GTP-binding and nucleic acid-binding protein YchF [Pseudoalteromonas haloplanktis ANT/505] Length = 363 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 24/129 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDELAKIVNPQRVLT 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 EF+ DI G++K A +G G+G++FL + T + H+V E EN+ I D Sbjct: 66 TSMEFV--DIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFEDENIIHVAGTIDPAD 123 Query: 261 ELSAYNSEL 269 ++ N+EL Sbjct: 124 DIDVINTEL 132 >gi|53803664|ref|YP_114464.1| GTP-dependent nucleic acid-binding protein EngD [Methylococcus capsulatus str. Bath] gi|53757425|gb|AAU91716.1| GTP-binding protein YchF [Methylococcus capsulatus str. Bath] Length = 363 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 25/137 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 +GI+GLPN GKST ++T+A +YPF T+ PN+G+V +LA Sbjct: 5 VGIVGLPNVGKSTLFNALTKAAIAAENYPFCTIDPNVGVVPVPDPRLEVLAGIVKPERVV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 DI G++ A +G G+G++FL H T + H+V E + +D LS Sbjct: 65 PTAIEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIAHVVRCFENDDIVHVAGKVDPLS- 123 Query: 265 YNSELRKKIEIVGLSQI 281 IE++G+ I Sbjct: 124 -------DIEVIGVELI 133 >gi|320352448|ref|YP_004193787.1| GTP-binding protein YchF [Desulfobulbus propionicus DSM 2032] gi|320120950|gb|ADW16496.1| GTP-binding protein YchF [Desulfobulbus propionicus DSM 2032] Length = 365 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 30/154 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T A +YPF T+ PN+GIV + E + Sbjct: 6 GIVGLPNVGKSTIFNALTAAAIAAENYPFCTIEPNVGIVPVPDARLDQLAELVKTRNKVA 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 DI G++K A QG G+G++FL H + +LH+V E++ +D L Sbjct: 66 TQMEFVDIAGLVKGASQGEGLGNQFLGHIRQVDAILHVVRCFEDDNIVHVDGSIDPL--- 122 Query: 266 NSELRKKIEIVG----LSQIDTVDSDTLARKKNE 295 + +E++ L+ ++TV+ LA+ +N+ Sbjct: 123 -----RDVEVITTELILADLETVEK-RLAKSRNQ 150 >gi|254526846|ref|ZP_05138898.1| GTP-binding protein YchF [Prochlorococcus marinus str. MIT 9202] gi|221538270|gb|EEE40723.1| GTP-binding protein YchF [Prochlorococcus marinus str. MIT 9202] Length = 363 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 27/156 (17%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK---EGYKEF---------- 208 GIIGLPN GKST F A V AK + A++PF T+ PN GIV + KE Sbjct: 5 GIIGLPNVGKSTLFNALVENAKAQAANFPFCTIEPNKGIVSVPDQRLKELGDLSSSQNII 64 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 DI G++K A +G G+G++FL + ++H+V E++ +D L Sbjct: 65 PTKIEFVDIAGLVKGASKGEGLGNKFLSNIREVDAIVHVVRCFEDSDVIHVSGKVDPLD- 123 Query: 265 YNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 IEI+ L +++ D L +++ + Q Sbjct: 124 -------DIEIINL-ELNLADLSQLQKRRERIKKQV 151 >gi|169796230|ref|YP_001714023.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter baumannii AYE] gi|260555292|ref|ZP_05827513.1| GTPase [Acinetobacter baumannii ATCC 19606] gi|169149157|emb|CAM87036.1| putative GTP-binding protein [Acinetobacter baumannii AYE] gi|260411834|gb|EEX05131.1| GTPase [Acinetobacter baumannii ATCC 19606] Length = 366 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 31/155 (20%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T+ PN GIV Sbjct: 7 NCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVNPQRV 66 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI-- 258 EF+ DI G++ A +G G+G++FL + T + H+V E ENV I Sbjct: 67 LPTTMEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKIDP 124 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 LD+++ N+EL L+ ++TV L K Sbjct: 125 LDDIATINTEL-------ALADLETVAKAILRLTK 152 >gi|321453634|gb|EFX64850.1| hypothetical protein DAPPUDRAFT_219469 [Daphnia pulex] Length = 399 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 23/135 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IGI+GLPN GKSTF +T++ ++PF T+ PN +G+ E + + Sbjct: 24 IGIVGLPNVGKSTFFNVLTKSAAPAENFPFCTIDPNESKVGVPDERFDWLLQHYKPSSPK 83 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCIL 259 + DI G++K AH+G G+G+ FL H + H+ E +V+ + Sbjct: 84 IQAYLNIVDIAGLVKGAHEGQGLGNAFLSHIRSVDAIFHLCRTFESEEITHVEGDVNPVR 143 Query: 260 DELSAYNSELRKKIE 274 D + N ELR K E Sbjct: 144 D-IEIINEELRLKDE 157 >gi|260550653|ref|ZP_05824862.1| GTPase [Acinetobacter sp. RUH2624] gi|260406364|gb|EEW99847.1| GTPase [Acinetobacter sp. RUH2624] Length = 366 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 31/155 (20%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T+ PN GIV Sbjct: 7 NCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVKPQRI 66 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI-- 258 EF+ DI G++ A +G G+G++FL + T + H+V E ENV I Sbjct: 67 LPTTMEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKIDP 124 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 LD+++ N+EL L+ ++TV L K Sbjct: 125 LDDIATINTEL-------ALADLETVAKAILRLTK 152 >gi|148927636|ref|ZP_01811096.1| GTP-binding protein, HSR1-related [candidate division TM7 genomosp. GTL1] gi|147887019|gb|EDK72527.1| GTP-binding protein, HSR1-related [candidate division TM7 genomosp. GTL1] Length = 163 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 29/153 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI+GLPN GKST ++T A+YPF T+ PN GIV K+ + Sbjct: 5 IGIVGLPNVGKSTLFNALTNNNILAANYPFATIEPNTGIVPVPDERLQKLADMYASKKIV 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 A DI G+++ A QG G+G++FL H + +V A + +D Sbjct: 65 PATVTFVDIAGLVRGASQGEGLGNQFLSHIREVSAVCQVVRAFHNDDIVHVHARVDP--- 121 Query: 265 YNSELRKKIEIVG----LSQIDTVDSDTLARKK 293 R+ I+IV L+ I TV+ L+ KK Sbjct: 122 -----REDIDIVNTELILADIQTVEKRLLSLKK 149 >gi|184157841|ref|YP_001846180.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter baumannii ACICU] gi|213157036|ref|YP_002319081.1| GTP-binding protein YchF [Acinetobacter baumannii AB0057] gi|215483685|ref|YP_002325906.1| GTP-dependent nucleic acid-binding protein engD [Acinetobacter baumannii AB307-0294] gi|239504034|ref|ZP_04663344.1| translation-associated GTPase [Acinetobacter baumannii AB900] gi|301346799|ref|ZP_07227540.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter baumannii AB056] gi|301511723|ref|ZP_07236960.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter baumannii AB058] gi|301596979|ref|ZP_07241987.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter baumannii AB059] gi|332855472|ref|ZP_08435892.1| GTP-binding protein YchF [Acinetobacter baumannii 6013150] gi|332866631|ref|ZP_08437118.1| GTP-binding protein YchF [Acinetobacter baumannii 6013113] gi|332872482|ref|ZP_08440452.1| GTP-binding protein YchF [Acinetobacter baumannii 6014059] gi|183209435|gb|ACC56833.1| predicted GTPase, probable translation factor [Acinetobacter baumannii ACICU] gi|193077132|gb|ABO11909.2| putative GTP-binding protein [Acinetobacter baumannii ATCC 17978] gi|213056196|gb|ACJ41098.1| GTP-binding protein YchF [Acinetobacter baumannii AB0057] gi|213987424|gb|ACJ57723.1| GTP-dependent nucleic acid-binding protein engD [Acinetobacter baumannii AB307-0294] gi|322508156|gb|ADX03610.1| Putative GTP-binding protein [Acinetobacter baumannii 1656-2] gi|323517730|gb|ADX92111.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter baumannii TCDC-AB0715] gi|332727446|gb|EGJ58876.1| GTP-binding protein YchF [Acinetobacter baumannii 6013150] gi|332734505|gb|EGJ65618.1| GTP-binding protein YchF [Acinetobacter baumannii 6013113] gi|332739288|gb|EGJ70145.1| GTP-binding protein YchF [Acinetobacter baumannii 6014059] Length = 363 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 31/155 (20%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVNPQRV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI-- 258 EF+ DI G++ A +G G+G++FL + T + H+V E ENV I Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKIDP 121 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 LD+++ N+EL L+ ++TV L K Sbjct: 122 LDDIATINTEL-------ALADLETVAKAILRLTK 149 >gi|167627808|ref|YP_001678308.1| GTP-dependent nucleic acid-binding protein EngD [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597809|gb|ABZ87807.1| GTP-binding protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 363 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL- 210 GI+GLPN GKST ++T A + A+YPF T+ PN+GIV K E IL Sbjct: 6 GIVGLPNVGKSTLFNALTEAGIEAANYPFCTIDPNVGIVSVPDQRLNELAKIVKPERILP 65 Query: 211 -----ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDD 110 >gi|89891252|ref|ZP_01202759.1| ATP/GTP-binding protein [Flavobacteria bacterium BBFL7] gi|89516564|gb|EAS19224.1| ATP/GTP-binding protein [Flavobacteria bacterium BBFL7] Length = 364 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G+V + +E + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNVGVVNVPDPRLKKLEELVNPERVIP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T ++H++ + + Sbjct: 64 ATVEIVDIAGLVKGASKGEGLGNQFLGNIRETDAIIHVLRCFDND 108 >gi|78187588|ref|YP_375631.1| GTP-dependent nucleic acid-binding protein EngD [Chlorobium luteolum DSM 273] gi|78167490|gb|ABB24588.1| conserved hypothetical protein [Chlorobium luteolum DSM 273] Length = 363 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 22/128 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------KEGYKEFI------- 209 GI+GLPN GKST ++T + + A+YPF T+ PN+G V + + + Sbjct: 6 GIVGLPNVGKSTLFNAITAKQAEAANYPFCTIEPNVGTVLVPDPRMQAIADVVKTPTLVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDE 261 + DI G++K A +G G+G++FL H ++H+V ++ +V+ LD+ Sbjct: 66 TTLEIVDIAGLVKGASKGEGLGNQFLSHIREVDAIVHVVRCFDDPDIIHVEGKIDP-LDD 124 Query: 262 LSAYNSEL 269 ++ ++EL Sbjct: 125 INTIDTEL 132 >gi|260062972|ref|YP_003196052.1| GTP-dependent nucleic acid-binding protein EngD [Robiginitalea biformata HTCC2501] gi|88784540|gb|EAR15710.1| GTP-binding protein [Robiginitalea biformata HTCC2501] Length = 371 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 28/145 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G+V + + + Sbjct: 11 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNIGVVNVPDPRLKKLESLVQPQRVVP 70 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILD- 260 + DI G++K A +G G+G++FL + T +LH++ + + V A+ I D Sbjct: 71 ATVEIVDIAGLVKGASKGEGLGNQFLGNIRETDAILHVLRCFDNDNVVHVDASVDPIRDK 130 Query: 261 -----ELSAYNSE-LRKKIEIVGLS 279 EL + E + K++E VG S Sbjct: 131 ETIDMELQLKDLETVEKRLEKVGRS 155 >gi|157413677|ref|YP_001484543.1| GTP-dependent nucleic acid-binding protein EngD [Prochlorococcus marinus str. MIT 9215] gi|157388252|gb|ABV50957.1| probable GTP-binding protein [Prochlorococcus marinus str. MIT 9215] Length = 363 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 27/156 (17%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK---EGYKEF---------- 208 GIIGLPN GKST F A V AK + A++PF T+ PN GIV + KE Sbjct: 5 GIIGLPNVGKSTLFNALVENAKAQAANFPFCTIEPNKGIVSVPDQRLKELGDLSSSQNII 64 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 DI G++K A +G G+G++FL + ++H+V E++ +D L Sbjct: 65 PTKIEFVDIAGLVKGASKGEGLGNKFLSNIREVDAIVHVVRCFEDSDVIHVSGKVDPLD- 123 Query: 265 YNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 IEI+ L +++ D L +++ + Q Sbjct: 124 -------DIEIINL-ELNLADLSQLQKRRERIKKQV 151 >gi|299142011|ref|ZP_07035145.1| GTP-binding protein YchF [Prevotella oris C735] gi|298576473|gb|EFI48345.1| GTP-binding protein YchF [Prevotella oris C735] Length = 367 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQSANFPFCTIEPNLGVITVPDERLNKLAEIVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + ++H++ +++ Sbjct: 66 ATCEIVDIAGLVKGASKGEGLGNKFLGNIRECDAIIHVIRCFDDD 110 >gi|262368446|ref|ZP_06061775.1| translation-associated GTPase [Acinetobacter johnsonii SH046] gi|262316124|gb|EEY97162.1| translation-associated GTPase [Acinetobacter johnsonii SH046] Length = 367 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 72/146 (49%), Gaps = 31/146 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T+ PN GIV Sbjct: 8 NCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLTAIVKPQRV 67 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI-- 258 EF+ DI G++ A +G G+G++FL + T + H+V E ENV I Sbjct: 68 IPTTMEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKIDP 125 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTV 284 LD+++ N+EL L+ ++TV Sbjct: 126 LDDIATINTEL-------ALADLETV 144 >gi|262278826|ref|ZP_06056611.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262259177|gb|EEY77910.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 366 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 31/155 (20%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T+ PN GIV Sbjct: 7 NCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVKPQRI 66 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI-- 258 EF+ DI G++ A +G G+G++FL + T + H+V E ENV I Sbjct: 67 LPTTMEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKIDP 124 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 LD+++ N+EL L+ ++TV L K Sbjct: 125 LDDIATINTEL-------ALADLETVAKAILRLTK 152 >gi|224372950|ref|YP_002607322.1| GTP-dependent nucleic acid-binding protein EngD [Nautilia profundicola AmH] gi|223589631|gb|ACM93367.1| GTP-binding protein YchF [Nautilia profundicola AmH] Length = 364 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 18/107 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIV-----------------KE 203 +GI+GLPN GKST ++T+ + A +YPF T+ PN IV K Sbjct: 3 VGIVGLPNVGKSTTFNALTKTQNAEAQNYPFCTIEPNKAIVPVPDERIEELAKIVNPDKI 62 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y DI G++K A +G G+G++FL + T ++LH+V E++ Sbjct: 63 QYSTIEFVDIAGLVKGASKGEGLGNQFLANIRETDIILHMVRCFEDD 109 >gi|289706748|ref|ZP_06503092.1| GTP-binding protein YchF [Micrococcus luteus SK58] gi|289556548|gb|EFD49895.1| GTP-binding protein YchF [Micrococcus luteus SK58] Length = 487 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 27/145 (18%) Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIA-DIGIIGLPNAGKSTFLASVTR 181 G G+AH A A P + + +A IG +GLPN GKST + TR Sbjct: 100 GDAGSAHGTGPVRDASAAAGPPV---------DCRTVALTIGFVGLPNVGKSTLFNAQTR 150 Query: 182 AKPKIADYPFTTLYPNLGIVKE------------GYKEFILA-----DIPGIIKNAHQGA 224 A+YPF T+ PN+G+V G + + A DI GI+K A +G Sbjct: 151 QTVLAANYPFATIEPNVGVVNLPDERLPQLAEIFGSERILPATVSFVDIAGIVKGASEGE 210 Query: 225 GIGDRFLKHTERTHVLLHIVSALEE 249 G+G++FL + H + +V A ++ Sbjct: 211 GLGNQFLANIREAHAIAQVVRAFDD 235 >gi|255319209|ref|ZP_05360426.1| GTP-binding protein YchF [Acinetobacter radioresistens SK82] gi|255303602|gb|EET82802.1| GTP-binding protein YchF [Acinetobacter radioresistens SK82] Length = 363 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 31/155 (20%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVNPQRI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI-- 258 EF+ DI G++ A +G G+G++FL + T + H+V E ENV I Sbjct: 64 IPTTMEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKIDP 121 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 LD+++ N+EL L+ ++TV L K Sbjct: 122 LDDIATINTEL-------ALADLETVAKAILRLTK 149 >gi|237737597|ref|ZP_04568078.1| GTP-binding protein [Fusobacterium mortiferum ATCC 9817] gi|229419477|gb|EEO34524.1| GTP-binding protein [Fusobacterium mortiferum ATCC 9817] Length = 365 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------------------ 202 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V Sbjct: 4 IGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNVGMVTVPDSRLDELSKIINPQRV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + EF+ DI G++K A +G G+G++FL + T + +V E++ Sbjct: 64 VQATVEFV--DIAGLVKGAAKGEGLGNKFLSNIRTTAAICQVVRCFEDD 110 >gi|169633723|ref|YP_001707459.1| GTP-dependent nucleic acid-binding protein EngD [Acinetobacter baumannii SDF] gi|169152515|emb|CAP01489.1| putative GTP-binding protein [Acinetobacter baumannii] Length = 366 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 31/155 (20%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T+ PN GIV Sbjct: 7 NCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVNPQRV 66 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI-- 258 EF+ DI G++ A +G G+G++FL + T + H+V E ENV I Sbjct: 67 LPTTMEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKIDP 124 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 LD+++ N+EL L+ ++TV L K Sbjct: 125 LDDIATINTEL-------ALADLETVAKAILRLTK 152 >gi|149907586|ref|ZP_01896333.1| putative GTP-binding protein [Moritella sp. PE36] gi|149809256|gb|EDM69185.1| putative GTP-binding protein [Moritella sp. PE36] Length = 363 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 24/129 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK---------------- 206 GI+GLPN GKST ++T+A + A++PF T+ PN G+V K Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPVPDKRLDALSAIVNPERVLP 65 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ I LD Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIIHVNNKISPLD 123 Query: 261 ELSAYNSEL 269 ++ N+EL Sbjct: 124 DIEIINTEL 132 >gi|281424757|ref|ZP_06255670.1| GTP-binding protein YchF [Prevotella oris F0302] gi|281401127|gb|EFB31958.1| GTP-binding protein YchF [Prevotella oris F0302] Length = 367 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQSANFPFCTIEPNLGVITVPDERLNKLAEIVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + ++H++ +++ Sbjct: 66 ATCEIVDIAGLVKGASKGEGLGNKFLGNIRECDAIIHVIRCFDDD 110 >gi|262379712|ref|ZP_06072868.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|262299169|gb|EEY87082.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 367 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 31/155 (20%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T+ PN GIV Sbjct: 8 NCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVNPQRI 67 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI-- 258 EF+ DI G++ A +G G+G++FL + T + H+V E ENV I Sbjct: 68 IPTTMEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKIDP 125 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 LD+++ N+EL L+ ++TV L K Sbjct: 126 LDDIATINTEL-------ALADLETVAKAILRLTK 153 >gi|241668369|ref|ZP_04755947.1| translation-associated GTPase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876902|ref|ZP_05249612.1| GTP-binding protein ychF [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842923|gb|EET21337.1| GTP-binding protein ychF [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 363 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL- 210 GI+GLPN GKST ++T A + A+YPF T+ PN+GIV K E IL Sbjct: 6 GIVGLPNVGKSTLFNALTEAGIEAANYPFCTIDPNVGIVSVPDQRLNELAKIVKPERILP 65 Query: 211 -----ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDD 110 >gi|254447839|ref|ZP_05061304.1| GTP-binding protein YchF [gamma proteobacterium HTCC5015] gi|198262619|gb|EDY86899.1| GTP-binding protein YchF [gamma proteobacterium HTCC5015] Length = 364 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 24/129 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A+ +YPF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTKAEIPAENYPFCTIDPNVGIVPVPDARMDALADIVKPEKIIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 EF+ DI G+++ A +G G+G++FL + T + H+V E +++ I LD Sbjct: 66 TTMEFV--DIAGLVEGASKGEGLGNKFLANIRETDAIAHVVRCFENDDITHVSGGISPLD 123 Query: 261 ELSAYNSEL 269 ++ N+EL Sbjct: 124 DMEIINTEL 132 >gi|293608337|ref|ZP_06690640.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828910|gb|EFF87272.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 363 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 72/146 (49%), Gaps = 31/146 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVKPQRI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI-- 258 EF+ DI G++ A +G G+G++FL + T + H+V E ENV I Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKIDP 121 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTV 284 LD+++ N+EL L+ ++TV Sbjct: 122 LDDIATINTEL-------ALADLETV 140 >gi|88608807|ref|YP_506775.1| translation-associated GTPase [Neorickettsia sennetsu str. Miyayama] gi|88600976|gb|ABD46444.1| GTP-binding protein YchF [Neorickettsia sennetsu str. Miyayama] Length = 350 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEG----------------- 204 GI+GLPN GKST ++T+ + + A+YPF T+ PN+ V E Sbjct: 6 GIVGLPNVGKSTLFNAMTQTQAAEAANYPFCTIEPNIAKVPEYDERLVQIAKISSAQKII 65 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + + + DI G++K A++G G+G++FL H +++H++ +N Sbjct: 66 FSQLEIVDIAGLVKGANKGEGLGNKFLSHIREVDLIIHVLRCFPDN 111 >gi|312891656|ref|ZP_07751166.1| GTP-binding protein YchF [Mucilaginibacter paludis DSM 18603] gi|311295840|gb|EFQ72999.1| GTP-binding protein YchF [Mucilaginibacter paludis DSM 18603] Length = 365 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDDRLTKLAELVNPQRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T+ ++H++ +++ Sbjct: 66 NVIEIVDIAGLVKGASKGEGLGNQFLGNIRATNAIIHVLRCFDDD 110 >gi|239621960|ref|ZP_04664991.1| translation-associated GTPase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515151|gb|EEQ55018.1| translation-associated GTPase [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 364 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 IGI+GLPN GKST ++TR +YPF T+ PN GIV K + E I+ Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDDRLPVLAKLVHTEKIV 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A E++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDD 110 >gi|56204039|emb|CAI18834.1| GTP binding protein 5 (putative) [Homo sapiens] Length = 233 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/168 (39%), Positives = 93/168 (55%), Gaps = 8/168 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTL--IDFR 60 F+D +V + G+GGAG F E EFGGPDGG GG GG V ++ + +L + R Sbjct: 72 FVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSR 131 Query: 61 YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPG 120 YQ GE G +N G G + + VPVGT V ++G ++ DL G I A G Sbjct: 132 YQGF----SGEDGGSKNCFGRSGAVLYIRVPVGTLV--KEGGRVVADLSCVGDEYIAALG 185 Query: 121 GNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLP 168 G GG GN F ++ N+AP PG GQ++++ L+LK +A G++G P Sbjct: 186 GAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFP 233 >gi|327300683|ref|XP_003235034.1| GTP-binding protein [Trichophyton rubrum CBS 118892] gi|326462386|gb|EGD87839.1| GTP-binding protein [Trichophyton rubrum CBS 118892] Length = 377 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 59/95 (62%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ +T+ K ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 65 ARISLVGFPSVGKSTFLSKITKTKSEVAAYSFTTLTAIPGVLEYGGSEIQILDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A ++ Q A Sbjct: 125 AAEGKGRGRQVISAAKTSDLILMVLDATKKAEQRA 159 >gi|303318763|ref|XP_003069381.1| GTP-binding protein, putative [Coccidioides posadasii C735 delta SOWgp] gi|240109067|gb|EER27236.1| GTP-binding protein, putative [Coccidioides posadasii C735 delta SOWgp] Length = 367 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ +T+ K ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 64 ARISLVGFPSVGKSTFLSKITKTKSEVAAYSFTTLTAIPGVLEYGGAEIQVLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 124 AAEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA 158 >gi|284033444|ref|YP_003383375.1| GTP-binding protein YchF [Kribbella flavida DSM 17836] gi|283812737|gb|ADB34576.1| GTP-binding protein YchF [Kribbella flavida DSM 17836] Length = 365 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI+GLPNAGKST ++T+ A+YPF T+ PN+G+V K+ Sbjct: 5 IGIVGLPNAGKSTLFNALTKNNVLAANYPFATIEPNVGVVGVPDARLGTLAEIFGSAKQL 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI++ A +G G+G++FL H + + + ++ Sbjct: 65 PATVQFVDIAGIVRGASEGEGLGNKFLSHIRESDAICQVTRVFRDD 110 >gi|323343699|ref|ZP_08083926.1| GTP-dependent nucleic acid-binding protein EngD [Prevotella oralis ATCC 33269] gi|323095518|gb|EFZ38092.1| GTP-dependent nucleic acid-binding protein EngD [Prevotella oralis ATCC 33269] Length = 367 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIEPNIGVITVPDERLNKLAEIVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 + DI G++K A +G G+G++FL + T ++H++ +EN+ Sbjct: 66 ATCEIVDIAGLVKGASKGEGLGNKFLGNIRETDAIIHVLRCFDDENI 112 >gi|76664921|emb|CAJ17898.1| PAM183 homologue [Candidatus Phytoplasma solani] Length = 321 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------------KEGY 205 IGIIGLPN GKST ++T+ + A+YPF T+ PN+G V K+ Sbjct: 3 IGIIGLPNVGKSTLFNALTKLQVLEANYPFATIEPNVGTVEVIDPRLKVLSKIFHSKKTI 62 Query: 206 KEFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++ A QG G+G++FL H + H+V E+ Sbjct: 63 AALIEFRDIAGLVAGASQGEGLGNQFLSHIRHVDAICHVVKCFED 107 >gi|295395767|ref|ZP_06805955.1| GTP-binding protein YchF [Brevibacterium mcbrellneri ATCC 49030] gi|294971302|gb|EFG47189.1| GTP-binding protein YchF [Brevibacterium mcbrellneri ATCC 49030] Length = 361 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI+GLPN GKST ++TRA+ A+YPF T+ PN+G+V G ++ + Sbjct: 5 IGIVGLPNVGKSTMFNALTRAEVLAANYPFATIDPNVGVVPLPDPRLNRLAEIFGSEKIL 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI GI+K A +G G+G++FL + + + A + Sbjct: 65 PATVSFVDIAGIVKGASEGEGLGNKFLANIREADAICQVTRAFSD 109 >gi|184200364|ref|YP_001854571.1| GTP-dependent nucleic acid-binding protein EngD [Kocuria rhizophila DC2201] gi|183580594|dbj|BAG29065.1| putative GTP-binding protein [Kocuria rhizophila DC2201] Length = 361 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------ 209 IGI+GLPN GKST ++TR A+YPF T+ PN+G+V + E Sbjct: 5 IGIVGLPNVGKSTLFNALTRNTVLAANYPFATIEPNVGVVNLPDERLDKLAELFDSQKIV 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI+K A +G G+G++FL + H + ++ ++ Sbjct: 65 PATVSFVDIAGIVKGASEGEGLGNQFLANIREAHAIAQVIRVFDD 109 >gi|183601421|ref|ZP_02962791.1| translation-associated GTPase [Bifidobacterium animalis subsp. lactis HN019] gi|219683477|ref|YP_002469860.1| GTP-dependent nucleic acid-binding protein EngD [Bifidobacterium animalis subsp. lactis AD011] gi|241191079|ref|YP_002968473.1| GTP-dependent nucleic acid-binding protein EngD [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196485|ref|YP_002970040.1| GTP-dependent nucleic acid-binding protein EngD [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183219027|gb|EDT89668.1| translation-associated GTPase [Bifidobacterium animalis subsp. lactis HN019] gi|219621127|gb|ACL29284.1| putative GTP-binding protein [Bifidobacterium animalis subsp. lactis AD011] gi|240249471|gb|ACS46411.1| translation-associated GTPase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251039|gb|ACS47978.1| translation-associated GTPase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295794068|gb|ADG33603.1| translation-associated GTPase [Bifidobacterium animalis subsp. lactis V9] Length = 364 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 IGI+GLPN GKST ++TR +YPF T+ PN GIV K +LA Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDKRLPVLAELVHTDKIV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A E++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDD 110 >gi|34763377|ref|ZP_00144329.1| GTP-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886950|gb|EAA24070.1| GTP-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 364 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 35/159 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK---EGYKEFI-------- 209 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V E E Sbjct: 4 IGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNIGMVTVPDERLNELAKIVNPQKI 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCIL 259 DI G++K A +G G+G++FL + T + +V E++ V + + Sbjct: 64 VPATVEFVDIAGLVKGASKGEGLGNKFLSNIRSTSAICQVVRCFEDDNIIHVDGSVDPLR 123 Query: 260 DELSAYNSELRKKIEIVGLSQIDTVDS-----DTLARKK 293 D + N+EL + I+TVD + LAR K Sbjct: 124 D-IEVINTELI-------FADIETVDKAIEKHEKLARNK 154 >gi|83285926|ref|XP_729937.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23489158|gb|EAA21502.1| GTP-binding protein, putative [Plasmodium yoelii yoelii] Length = 744 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 86/348 (24%), Positives = 160/348 (45%), Gaps = 65/348 (18%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F D + +SG GG +R K ++ G GG GG+V +++ ++ LI + Sbjct: 285 RFCDFLWITAKSGKGGNPNYKKQRSKKLKGEG----YGGHGGNVILKSKKSIYDLI--KI 338 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQR------- 114 +Q KA GE + N G G+D ++ VPVGT V + + C + R Sbjct: 339 EQKIKANDGE-DFRENSRGKDGKDKIIFVPVGTIVRKR----IYCQKKNQNNRKIYKSVF 393 Query: 115 ----------IILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGI 164 +++A GG GG + FK + P L ++ ++ L+L+LI D+ Sbjct: 394 WYQFLNENEELLVARGGKGGISYSLFKKHDFRLP------ELSEKILLELELRLINDVAF 447 Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKNAHQ 222 IG+ N+GK++ +S+++ I +TT P++ + +G E L D P + NAH+ Sbjct: 448 IGIENSGKTSLCSSLSKYYGNINSDIYTTTIPHVSNINYIDGV-EITLLDTPYLFYNAHK 506 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEE--------NVQAAY------------------Q 256 G R L+H R+ ++++++ + N++ Y Sbjct: 507 DKTRGKRILRHLYRSKLIIYVIDVSNDKLKNLDDPNIEDYYLKSLKNEENQNKNDKIDPP 566 Query: 257 CILDE-LSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQV 303 CI DE L Y ++ K+I+++ +++ + D L +K+ +AT+C + Sbjct: 567 CIDDENLKEYYNDTIKQIKMLR-NELFLFNPDYLKKKELVVATKCDML 613 >gi|296393512|ref|YP_003658396.1| GTP-binding protein YchF [Segniliparus rotundus DSM 44985] gi|296180659|gb|ADG97565.1| GTP-binding protein YchF [Segniliparus rotundus DSM 44985] Length = 359 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 +GI+GLPN GKST ++TRA A+YPF T+ PN+G+V K +LA Sbjct: 5 LGIVGLPNVGKSTLFNALTRAGVLAANYPFATIEPNVGVVSLPDKRLDVLAEIFGSERTV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++ A +GAG+G++FL + + +V A + Sbjct: 65 PASVTFVDIAGLVAGASEGAGLGNKFLANIREADAICQVVRAFAD 109 >gi|213692557|ref|YP_002323143.1| GTP-binding protein YchF [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524018|gb|ACJ52765.1| GTP-binding protein YchF [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 392 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 IGI+GLPN GKST ++TR +YPF T+ PN GIV K +LA Sbjct: 31 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDKRLPVLAKLVHTEKVV 90 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A E++ Sbjct: 91 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDD 136 >gi|261198517|ref|XP_002625660.1| GTP-binding protein 1 [Ajellomyces dermatitidis SLH14081] gi|239594812|gb|EEQ77393.1| GTP-binding protein 1 [Ajellomyces dermatitidis SLH14081] gi|239610067|gb|EEQ87054.1| GTP-binding protein 1 [Ajellomyces dermatitidis ER-3] Length = 363 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ +T+ K ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 60 ARIALVGFPSVGKSTFLSKITKTKSEVAAYSFTTLTAIPGVLEYGGAEIQVLDLPGIIEG 119 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + +++ I+ A + Q A Sbjct: 120 AAEGKGRGRQVISAAKTSDLIMMILDATKRAEQRA 154 >gi|224536949|ref|ZP_03677488.1| hypothetical protein BACCELL_01825 [Bacteroides cellulosilyticus DSM 14838] gi|224521436|gb|EEF90541.1| hypothetical protein BACCELL_01825 [Bacteroides cellulosilyticus DSM 14838] Length = 367 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK---EGYKEFI---------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLNKLADLVHPQRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 + DI G++K A +G G+G++FL + T ++H++ +ENV Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAIIHVLRCFDDENV 112 >gi|71030750|ref|XP_765017.1| hypothetical protein [Theileria parva strain Muguga] gi|68351973|gb|EAN32734.1| GTP-binding protein, putative [Theileria parva] Length = 375 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 124/254 (48%), Gaps = 21/254 (8%) Query: 45 VWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGT----QVFEED 100 V+ +AT +N I K+ G R G D ++ +P+G+ +V +D Sbjct: 70 VYFKATHLVNDFIHMESVIKGKSGGDAHGTSR---GLHASDTIVNIPLGSILRKRVRRDD 126 Query: 101 GISLIC--DLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKL 158 I + +++A GG GG G + FK N+ +G+ + L+L+L Sbjct: 127 RTRCIFWHQFLNPDETLLVARGGRGGLGPSCFKKHDNRL------AEVGESINLELELRL 180 Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGI 216 D+ IGLPN+GK++ ++S+T +I +T P++ ++K +G + + D+P + Sbjct: 181 FNDVAFIGLPNSGKTSLISSLTSYMTRIGPEEGSTTRPHIALIKFLDGV-DIRVMDLPPL 239 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-NVQAAYQCILDELSAYNSELRKKIEI 275 +N + + + +H R+ ++ +++SA E+ + + + + +S+ + K+E+ Sbjct: 240 SQNTDK--DMVKKITRHIYRSKIIAYVISAAEDGDHMETLRSLREIVSSSKTFDDSKLEM 297 Query: 276 VGLSQIDTVDSDTL 289 V +++ D + ++L Sbjct: 298 VIMTKCDMIHRNSL 311 >gi|256821848|ref|YP_003145811.1| GTP-binding protein YchF [Kangiella koreensis DSM 16069] gi|256795387|gb|ACV26043.1| GTP-binding protein YchF [Kangiella koreensis DSM 16069] Length = 363 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 21/109 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T A A+YPF T+ PN G+V Sbjct: 4 NCGIVGLPNVGKSTLFNALTDAGIDAANYPFCTIEPNTGVVPIPDPRLDALAKIVNPQRV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + TH + H+V + + Sbjct: 64 LPATMEFV--DIAGLVAGASKGEGLGNKFLANIRETHAIAHVVRCFDND 110 >gi|220909626|ref|YP_002484937.1| GTP-dependent nucleic acid-binding protein EngD [Cyanothece sp. PCC 7425] gi|219866237|gb|ACL46576.1| GTP-binding protein YchF [Cyanothece sp. PCC 7425] Length = 363 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 GI+GLPN GKST F A V AK + A++PF T+ PN+G+V + ILA Sbjct: 5 GIVGLPNVGKSTLFNALVANAKAEAANFPFCTIEPNVGVVAVPDERLQILANISSSAEIV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T ++ +V E++ Sbjct: 65 PTRVEFVDIAGLVKGASEGEGLGNKFLANIRETDAIVQVVRCFEDD 110 >gi|197284951|ref|YP_002150823.1| GTP-dependent nucleic acid-binding protein EngD [Proteus mirabilis HI4320] gi|227355353|ref|ZP_03839754.1| GTP-dependent nucleic acid-binding protein [Proteus mirabilis ATCC 29906] gi|194682438|emb|CAR42329.1| GTP-dependent nucleic acid-binding protein [Proteus mirabilis HI4320] gi|227164577|gb|EEI49448.1| GTP-dependent nucleic acid-binding protein [Proteus mirabilis ATCC 29906] Length = 363 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 39/170 (22%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKPQRVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++K A +G G+G++FL + T + H+V E + V A + +++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIVHVAGKVDPAEDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDS------------DTLARKKNELATQC 300 N+EL LS +DT + D +A+ + E+ +C Sbjct: 126 ETINTEL-------ALSDLDTCERAMHRNQKKAKGGDKVAKAEMEVLEKC 168 >gi|119025627|ref|YP_909472.1| GTP-dependent nucleic acid-binding protein EngD [Bifidobacterium adolescentis ATCC 15703] gi|118765211|dbj|BAF39390.1| widely conserved hypothetical GTPase-like protein [Bifidobacterium adolescentis ATCC 15703] Length = 366 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 IGI+GLPN GKST ++TR +YPF T+ PN GIV K + E I+ Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDDRLPVLAKLVHTEKIV 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A E++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDD 110 >gi|302658675|ref|XP_003021039.1| hypothetical protein TRV_04904 [Trichophyton verrucosum HKI 0517] gi|291184914|gb|EFE40421.1| hypothetical protein TRV_04904 [Trichophyton verrucosum HKI 0517] Length = 303 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 59/95 (62%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ +T+ K ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 49 ARISLVGFPSVGKSTFLSKITKTKSEVAAYSFTTLTAIPGVLEYGGSEIQILDLPGIIEG 108 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A ++ Q A Sbjct: 109 AAEGRGRGRQVISAAKTSDLILMVLDATKKAEQRA 143 >gi|291276877|ref|YP_003516649.1| putative GTP-binding protein [Helicobacter mustelae 12198] gi|290964071|emb|CBG39911.1| putative GTP-binding protein [Helicobacter mustelae 12198] Length = 366 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 31/158 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 IGI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV+ Sbjct: 5 IGIVGLPNVGKSSTFNALTKTQNAQSANYPFCTIEPNKAIVEVPDSRLKNLAKIINPERV 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDE 261 EF+ DI G+++ A++G G+G++FL + + T V+LH+V E+ + +D Sbjct: 65 LHSMVEFV--DIAGLVRGANKGEGLGNQFLANIKETDVILHLVRCFEDENITHVEGSVDP 122 Query: 262 LSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 L + IE++ L I D +L ++ +L Q Sbjct: 123 L--------RDIEVIDLELI-LADLASLQKRIEKLTRQ 151 >gi|261343916|ref|ZP_05971561.1| GTP-binding protein YchF [Providencia rustigianii DSM 4541] gi|282568302|gb|EFB73837.1| GTP-binding protein YchF [Providencia rustigianii DSM 4541] Length = 363 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++K A +G G+G++FL + T + H+V E++ + A Q ++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEDDNIIHVAGQVDPASDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 EVINTEL-------ALSDLDTCE 141 >gi|320034518|gb|EFW16462.1| GTP binding protein Gtp1 [Coccidioides posadasii str. Silveira] Length = 368 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ +T+ K ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 65 ARISLVGFPSVGKSTFLSKITKTKSEVAAYSFTTLTAIPGVLEYGGAEIQVLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 125 AAEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA 159 >gi|225847929|ref|YP_002728092.1| GTP-dependent nucleic acid-binding protein EngD [Sulfurihydrogenibium azorense Az-Fu1] gi|225643635|gb|ACN98685.1| GTP-binding protein YchF [Sulfurihydrogenibium azorense Az-Fu1] Length = 370 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 18/107 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKE 207 ++GI+GLPN GKST ++T AK +A+YPF T+ PN+GIV E K Sbjct: 4 NVGIVGLPNVGKSTIFNALTETAKASVANYPFCTIDPNVGIVNVPDERLYKLAEIEKSKN 63 Query: 208 FILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + A DI G+++ A +G G+G++FL + + + H+V ++ Sbjct: 64 IVPATIEFVDIAGLVRGASKGEGLGNQFLANIRQVSAIAHVVRCFDD 110 >gi|301095343|ref|XP_002896772.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262108655|gb|EEY66707.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 461 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------- 201 IG +G P+AGKSTF +VT K K+ ++PFTT+ PN GI Sbjct: 5 IGCVGKPSAGKSTFFNAVTDGKAKVGNFPFTTIEPNEGITYYMTPCPCLDKNKTSMCAPR 64 Query: 202 ----KEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 ++G Y L DI G+I A +GAG+G++FL VL+HI+ Sbjct: 65 YGKCEQGTRYIPVKLLDIAGLIPGASEGAGLGNKFLDDLRHAQVLMHII 113 >gi|209524577|ref|ZP_03273125.1| GTP-binding protein YchF [Arthrospira maxima CS-328] gi|209495035|gb|EDZ95342.1| GTP-binding protein YchF [Arthrospira maxima CS-328] Length = 363 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 GI+GLPN GKST F A V AK + A++PF T+ PN+G+V K E I+ Sbjct: 5 GIVGLPNVGKSTLFNALVANAKAQAANFPFCTIEPNVGVVAVPDQRLQVLAKISNSEQIV 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A QG G+G++FL H ++ +V E + Sbjct: 65 PTRIEFVDIAGLVQGASQGEGLGNQFLSHIREVDAIVQVVRCFEND 110 >gi|261878892|ref|ZP_06005319.1| GTP-dependent nucleic acid-binding protein EngD [Prevotella bergensis DSM 17361] gi|270334473|gb|EFA45259.1| GTP-dependent nucleic acid-binding protein EngD [Prevotella bergensis DSM 17361] Length = 367 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIEPNLGVITVPDERLTKLAEIVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + ++H++ +++ Sbjct: 66 ATCEIVDIAGLVKGASKGEGLGNKFLGNIRECDAIIHVIRCFDDD 110 >gi|262166272|ref|ZP_06034009.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio mimicus VM223] gi|262025988|gb|EEY44656.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio mimicus VM223] Length = 363 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 27/151 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGVEAANFPFCTIEPNTGVVPVPDPRLDALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E EN+ A L+++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVSPLEDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 N EL L+ +D+ + L + K Sbjct: 126 EVINLEL-------ALADLDSCERAILRQSK 149 >gi|154487091|ref|ZP_02028498.1| hypothetical protein BIFADO_00931 [Bifidobacterium adolescentis L2-32] gi|154084954|gb|EDN83999.1| hypothetical protein BIFADO_00931 [Bifidobacterium adolescentis L2-32] Length = 364 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 IGI+GLPN GKST ++TR +YPF T+ PN GIV K + E I+ Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDNRLPVLAKLVHTEKIV 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A E++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDD 110 >gi|76801483|ref|YP_326491.1| translation-associated GTPase [Natronomonas pharaonis DSM 2160] gi|76557348|emb|CAI48925.1| probable GTP-binding protein [Natronomonas pharaonis DSM 2160] Length = 393 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 22/107 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 + + G PNAGKSTF + T A +YPFTT+ PN G+ Sbjct: 4 VALAGKPNAGKSTFYTAATMADADTGNYPFTTIDPNRGVTHVRTRCPCLDLESRCGNDTC 63 Query: 203 EGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G K ++ L D+ G++ AH+G G+G++FL V+LH+V A Sbjct: 64 HGGKRYVPVELLDVAGLVPGAHEGKGLGNQFLDELTNADVILHVVDA 110 >gi|113460648|ref|YP_718714.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus somnus 129PT] gi|170718049|ref|YP_001785088.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus somnus 2336] gi|112822691|gb|ABI24780.1| noncellulosomal endoglucanase [Haemophilus somnus 129PT] gi|168826178|gb|ACA31549.1| GTP-binding protein YchF [Haemophilus somnus 2336] Length = 363 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 24/129 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALADIVKPERILP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E + V A + LD Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLD 123 Query: 261 ELSAYNSEL 269 ++ N+EL Sbjct: 124 DIETINTEL 132 >gi|212716976|ref|ZP_03325104.1| hypothetical protein BIFCAT_01922 [Bifidobacterium catenulatum DSM 16992] gi|225352804|ref|ZP_03743827.1| hypothetical protein BIFPSEUDO_04436 [Bifidobacterium pseudocatenulatum DSM 20438] gi|322690884|ref|YP_004220454.1| GTPase [Bifidobacterium longum subsp. longum JCM 1217] gi|212660261|gb|EEB20836.1| hypothetical protein BIFCAT_01922 [Bifidobacterium catenulatum DSM 16992] gi|225156411|gb|EEG69980.1| hypothetical protein BIFPSEUDO_04436 [Bifidobacterium pseudocatenulatum DSM 20438] gi|320455740|dbj|BAJ66362.1| GTPase [Bifidobacterium longum subsp. longum JCM 1217] Length = 365 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 IGI+GLPN GKST ++TR +YPF T+ PN GIV K + E I+ Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDDRLPVLAKLVHTEKIV 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A E++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDD 110 >gi|77919596|ref|YP_357411.1| GTP-dependent nucleic acid-binding protein EngD [Pelobacter carbinolicus DSM 2380] gi|77545679|gb|ABA89241.1| GTP-binding protein YchF [Pelobacter carbinolicus DSM 2380] Length = 364 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 26/147 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA---------- 211 GI+GLPN GKST ++T A + A+YPF T+ PN+G+V +LA Sbjct: 6 GIVGLPNVGKSTIFNAITSAGAESANYPFCTIEPNVGVVSVPDPRLDVLADIVQPQRVLP 65 Query: 212 ------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 DI G+++ A QG G+G++FL H + + +IV +++ +D + Sbjct: 66 TTIEFVDIAGLVRGASQGEGLGNQFLGHIRQVDAIANIVRCFDDDNVVHVDGSVDPM--- 122 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARK 292 + IE++ ++++ D DT+ ++ Sbjct: 123 -----RDIEVIQ-TELNLADLDTVEKR 143 >gi|89900370|ref|YP_522841.1| GTP-dependent nucleic acid-binding protein EngD [Rhodoferax ferrireducens T118] gi|89345107|gb|ABD69310.1| conserved hypothetical protein [Rhodoferax ferrireducens T118] Length = 361 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VKE 203 GI+GLPN GKST ++T+A +YPF T+ PN+GI V+ Sbjct: 4 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLDALSAIVKPQRVQR 63 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A G G+G++FL H T ++++V E+ Sbjct: 64 AIVEFV--DIAGLVAGASTGEGLGNKFLAHIRETDAIINVVRCFED 107 >gi|262375419|ref|ZP_06068652.1| translation-associated GTPase [Acinetobacter lwoffii SH145] gi|262309673|gb|EEY90803.1| translation-associated GTPase [Acinetobacter lwoffii SH145] Length = 367 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 31/146 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T+ PN GIV Sbjct: 8 NCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLTAIVKPQRV 67 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI-- 258 EF+ DI G++ A +G G+G++FL + T + H+V E ENV I Sbjct: 68 IPTSMEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGRIDP 125 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTV 284 LD+++ N+EL L+ +D V Sbjct: 126 LDDIATINTEL-------ALADLDAV 144 >gi|327350989|gb|EGE79846.1| GTP-binding protein [Ajellomyces dermatitidis ATCC 18188] Length = 368 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ +T+ K ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 65 ARIALVGFPSVGKSTFLSKITKTKSEVAAYSFTTLTAIPGVLEYGGAEIQVLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + +++ I+ A + Q A Sbjct: 125 AAEGKGRGRQVISAAKTSDLIMMILDATKRAEQRA 159 >gi|194246646|ref|YP_002004285.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus Phytoplasma mali] gi|193807003|emb|CAP18438.1| conserved hypothetical protein, GTP-binding [Candidatus Phytoplasma mali] Length = 365 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 20/128 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE-GYKEFILA--------- 211 +GI+GLPN GKST ++T+ A+YPF T+ PN G+V Y+ LA Sbjct: 3 VGIVGLPNVGKSTLFNALTKMSALEANYPFATIEPNTGVVNVFDYRLHSLAKIFNSKKII 62 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDE 261 DI G+++ A +G G+G++FL H + HIV + +N+ + I + E Sbjct: 63 FTTIEFIDIAGLVEGASKGEGLGNQFLNHIRNVDAICHIVKCFDNDNILHVREKIDPIKE 122 Query: 262 LSAYNSEL 269 + N+EL Sbjct: 123 IDIINTEL 130 >gi|258572192|ref|XP_002544858.1| GTP-binding protein 1 [Uncinocarpus reesii 1704] gi|237905128|gb|EEP79529.1| GTP-binding protein 1 [Uncinocarpus reesii 1704] Length = 345 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ +T+ K ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 42 ARISLVGFPSVGKSTFLSKITKTKSEVAAYSFTTLTAIPGVLEYGGAEIQVLDLPGIIEG 101 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 102 AAEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA 136 >gi|119963314|ref|YP_948517.1| GTP-dependent nucleic acid-binding protein EngD [Arthrobacter aurescens TC1] gi|119950173|gb|ABM09084.1| putative GTP-binding protein YchF [Arthrobacter aurescens TC1] Length = 398 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI+GLPN GKST ++TR + A+YPF T+ PN+G+V G ++ + Sbjct: 42 IGIVGLPNVGKSTLFNALTRNQVLAANYPFATIEPNVGVVNLPDPRLAKLAEIFGSQKLL 101 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI GI+K A +G G+G++FL + + +V ++ Sbjct: 102 PAPVSFVDIAGIVKGASEGEGLGNKFLANIREAEAIAQVVRVFDD 146 >gi|256846826|ref|ZP_05552281.1| GTP-binding protein [Fusobacterium sp. 3_1_36A2] gi|256717792|gb|EEU31350.1| GTP-binding protein [Fusobacterium sp. 3_1_36A2] Length = 364 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 35/159 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK---EGYKEFI-------- 209 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V E E Sbjct: 4 IGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNIGMVTVPDERLNELAKIVNPQKI 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCIL 259 DI G++K A +G G+G++FL + T + +V E++ V + + Sbjct: 64 VPATVEFVDIAGLVKGASKGEGLGNKFLSNIRSTSAICQVVRCFEDDNIIHVDGSVDPLR 123 Query: 260 DELSAYNSELRKKIEIVGLSQIDTVDS-----DTLARKK 293 D + N+EL + I+TVD + LAR K Sbjct: 124 D-IEVINTELI-------FADIETVDKAIEKHEKLARNK 154 >gi|322380381|ref|ZP_08054587.1| translation-associated GTPase [Helicobacter suis HS5] gi|321147171|gb|EFX41865.1| translation-associated GTPase [Helicobacter suis HS5] Length = 367 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIV------------------- 201 IGI+GLPN GKS+ ++TR + + A+YPF T+ PN +V Sbjct: 7 IGIVGLPNVGKSSLFNALTRTTQAQSANYPFCTIDPNKAVVDVPDARLKELARIVKPEKI 66 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 + EF+ DI G+IK A QG G+G++FL V+LH+V E EN+ Sbjct: 67 QHSSVEFV--DIAGLIKGASQGEGLGNQFLGAVRECAVILHVVRCFEDENI 115 >gi|237740885|ref|ZP_04571366.1| GTP-binding protein [Fusobacterium sp. 4_1_13] gi|229431182|gb|EEO41394.1| GTP-binding protein [Fusobacterium sp. 4_1_13] Length = 364 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 33/158 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK---EGYKEFI-------- 209 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V E E Sbjct: 4 IGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNIGMVTVPDERLNELAKIVNPQKI 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 DI G++K A +G G+G++FL + T + +V E +NV + L Sbjct: 64 VPATVEFVDIAGLVKGASKGEGLGNKFLSNIRSTSAICQVVRCFEDDNVIHVDGSVDPLR 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDS-----DTLARKK 293 ++ N+EL + I+TVD + LAR K Sbjct: 124 DIDVINTELI-------FADIETVDKAIEKHEKLARNK 154 >gi|255531225|ref|YP_003091597.1| GTP-binding protein YchF [Pedobacter heparinus DSM 2366] gi|255344209|gb|ACU03535.1| GTP-binding protein YchF [Pedobacter heparinus DSM 2366] Length = 364 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNIGVITVPDERLTKLAELVKPNRVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G++K A +G G+G++FL + T+ ++H++ ++ Sbjct: 66 NTIEIVDIAGLVKGASKGEGLGNQFLGNIRATNAIIHVLRCFDD 109 >gi|295677800|ref|YP_003606324.1| GTP-binding protein YchF [Burkholderia sp. CCGE1002] gi|295437643|gb|ADG16813.1| GTP-binding protein YchF [Burkholderia sp. CCGE1002] Length = 364 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 28/149 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGISAENYPFCTIEPNVGIVEVPDTRLKALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E++ + A + L ++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVANKVDPLSDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 N+EL L+ + TV+ LAR Sbjct: 126 EVINTEL-------ALADLGTVEK-ALAR 146 >gi|27904681|ref|NP_777807.1| GTP-dependent nucleic acid-binding protein EngD [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|38372583|sp|Q89AR6|ENGD_BUCBP RecName: Full=GTP-dependent nucleic acid-binding protein engD gi|27904078|gb|AAO26912.1| hypothetical protein bbp_180 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 363 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 75/162 (46%), Gaps = 31/162 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 G +GLPN GKST +T+ +YPF T+ N+GIV K Sbjct: 6 GFVGLPNVGKSTLFNYLTKLNIPADNYPFCTIKSNVGIVPVLDNRLNKIAQVVCSNKIIP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN-VQAAY--------- 255 L DI G++K A++G G+G++FL H T+V++HIV E V Y Sbjct: 66 ATIELVDIAGLVKGAYKGEGLGNQFLDHIRDTNVIMHIVRCFENRYVTHIYGSVDPVRDV 125 Query: 256 QCILDELSAYNSELRK----KIEIVGLSQIDTVDSDTLARKK 293 Q I EL + E+ K K+EI LS V+ + L KK Sbjct: 126 QIINLELILSDIEVCKNRMCKLEINKLSHNKQVNKELLILKK 167 >gi|251789667|ref|YP_003004388.1| GTP-dependent nucleic acid-binding protein EngD [Dickeya zeae Ech1591] gi|247538288|gb|ACT06909.1| GTP-binding protein YchF [Dickeya zeae Ech1591] Length = 363 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ + D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVNPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 DTINTEL-------ALSDLDTCE 141 >gi|149279252|ref|ZP_01885384.1| GTP-binding protein [Pedobacter sp. BAL39] gi|149230014|gb|EDM35401.1| GTP-binding protein [Pedobacter sp. BAL39] Length = 364 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNIGVITVPDERLTKLSELVKPQRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G++K A +G G+G++FL + T+ ++H++ ++ Sbjct: 66 NTIEIVDIAGLVKGASKGEGLGNQFLGNIRATNAIIHVLRCFDD 109 >gi|283785508|ref|YP_003365373.1| GTP-dependent nucleic acid-binding protein [Citrobacter rodentium ICC168] gi|282948962|emb|CBG88565.1| GTP-dependent nucleic acid-binding protein [Citrobacter rodentium ICC168] Length = 363 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V E E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLEQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|329908412|ref|ZP_08274862.1| GTP-binding and nucleic acid-binding protein YchF [Oxalobacteraceae bacterium IMCC9480] gi|327546718|gb|EGF31666.1| GTP-binding and nucleic acid-binding protein YchF [Oxalobacteraceae bacterium IMCC9480] Length = 363 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRMDALSEIVKPQRAVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL H T ++++V E++ Sbjct: 66 TTVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDD 110 >gi|291617187|ref|YP_003519929.1| EngD [Pantoea ananatis LMG 20103] gi|291152217|gb|ADD76801.1| EngD [Pantoea ananatis LMG 20103] gi|327393642|dbj|BAK11064.1| GTP-dependent nucleic acid-binding protein EngD EngD [Pantoea ananatis AJ13355] Length = 363 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDQLSEIVKPQRVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ + D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL L+ +DT + Sbjct: 126 ETINTEL-------ALADLDTCE 141 >gi|171743285|ref|ZP_02919092.1| hypothetical protein BIFDEN_02414 [Bifidobacterium dentium ATCC 27678] gi|171278899|gb|EDT46560.1| hypothetical protein BIFDEN_02414 [Bifidobacterium dentium ATCC 27678] Length = 365 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 IGI+GLPN GKST ++TR +YPF T+ PN GIV K + E I+ Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDDRLPILAKLVHTEKIV 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A E++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDD 110 >gi|302767476|ref|XP_002967158.1| hypothetical protein SELMODRAFT_144847 [Selaginella moellendorffii] gi|300165149|gb|EFJ31757.1| hypothetical protein SELMODRAFT_144847 [Selaginella moellendorffii] Length = 376 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST F A V AK + A++PF T+ PN+GIV Sbjct: 12 GIVGLPNVGKSTLFNALVENAKAQAANFPFCTIEPNVGIVAVPDTRLSVLTDISSSKQTV 71 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL+H ++ +V +++ Sbjct: 72 PASMEFV--DIAGLVKGASKGEGLGNKFLQHIREVDSIVQVVRCFDDS 117 >gi|300777676|ref|ZP_07087534.1| GTP-binding protein YchF [Chryseobacterium gleum ATCC 35910] gi|300503186|gb|EFK34326.1| GTP-binding protein YchF [Chryseobacterium gleum ATCC 35910] Length = 363 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------- 209 GI+GLPN GKST ++ AK + A+YPF T+ PNLG V + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANYPFCTIEPNLGTVSVPDQRLFELEKIVKPERVLP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++K A +G G+G++FL + ++H++ + Sbjct: 64 AVVEIVDIAGLVKGASKGEGLGNQFLANIRECEAIIHVLRCFD 106 >gi|306823231|ref|ZP_07456607.1| GTP-binding protein YchF [Bifidobacterium dentium ATCC 27679] gi|309801610|ref|ZP_07695731.1| GTP-binding protein YchF [Bifidobacterium dentium JCVIHMP022] gi|304553863|gb|EFM41774.1| GTP-binding protein YchF [Bifidobacterium dentium ATCC 27679] gi|308221742|gb|EFO78033.1| GTP-binding protein YchF [Bifidobacterium dentium JCVIHMP022] Length = 365 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 IGI+GLPN GKST ++TR +YPF T+ PN GIV K + E I+ Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDDRLPILAKLVHTEKIV 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A E++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDD 110 >gi|190570539|ref|YP_001974897.1| GTP-binding protein YchF [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019214|ref|ZP_03335021.1| GTP-binding protein YchF [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190356811|emb|CAQ54178.1| GTP-binding protein YchF [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995323|gb|EEB55964.1| GTP-binding protein YchF [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 364 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 31/162 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKST ++T + + A+YPF T+ PN+G V K Sbjct: 4 NCGIVGLPNIGKSTLFNALTESSAAEAANYPFCTIEPNVGKVPIRDQRLKQIASIAHSGK 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 Y + + DI G++K A +G G+G++FL H ++H++ + D++ Sbjct: 64 IIYNQLEVVDIAGLVKGASKGEGLGNKFLSHIREVDAIVHLLRCFTD----------DDI 113 Query: 263 SAYNSELR--KKIEIVGLSQIDTVDSDTLARKKNELATQCGQ 302 S NS++ EIV + I D D++ ++ +L + Q Sbjct: 114 SHVNSKIDPISDAEIVEMELI-LADIDSIEKRLPQLEKKAKQ 154 >gi|91787025|ref|YP_547977.1| GTP-dependent nucleic acid-binding protein EngD [Polaromonas sp. JS666] gi|91696250|gb|ABE43079.1| conserved hypothetical protein [Polaromonas sp. JS666] Length = 363 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VKE 203 GI+GLPN GKST ++T+A +YPF T+ PN+GI V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLDALSAIVNPQKVQR 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A G G+G++FL H T +++V E++ Sbjct: 66 AIVEFV--DIAGLVAGASTGEGLGNKFLAHIRETDATINVVRCFEDD 110 >gi|291530528|emb|CBK96113.1| GTP-binding protein YchF [Eubacterium siraeum 70/3] gi|291557882|emb|CBL34999.1| GTP-binding protein YchF [Eubacterium siraeum V10Sc8a] Length = 360 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 17/104 (16%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK---------------EGYKEF 208 ++GLPN GKST ++T A + A+YPF T+ PN+GIV E + Sbjct: 1 MVGLPNVGKSTLFNALTNAGAESANYPFCTIEPNVGIVSVPDERLDALAKMYNPEKFTPA 60 Query: 209 IL--ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 L DI G++K A +G G+G++FL + ++H+V E++ Sbjct: 61 TLEFVDIAGLVKGASKGEGLGNKFLSNIREVDAIVHVVRCFEDD 104 >gi|156048190|ref|XP_001590062.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980] gi|154693223|gb|EDN92961.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980 UF-70] Length = 365 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ +T+ K +A Y FTTL G+++ G E + D+PGII+ Sbjct: 59 ARIALVGFPSVGKSTFLSKITKTKSVVAAYSFTTLTAIPGVLEYGGAEIQILDLPGIIEG 118 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A ++ Q A Sbjct: 119 AAEGKGRGRQVISAAKTSDLILMVLDATKKAEQRA 153 >gi|51598496|ref|YP_072684.1| GTP-dependent nucleic acid-binding protein EngD [Borrelia garinii PBi] gi|51573067|gb|AAU07092.1| conserved hypothetical GTP-binding protein [Borrelia garinii PBi] Length = 368 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST +S+T +K +IA+YPF T+ PNLGIV+ Sbjct: 6 GIVGLPNVGKSTLFSSLTSSKVEIANYPFCTIEPNLGIVEIPDERLLKISGCIVPQKIIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A G G+G++FL + +++H+V EE Sbjct: 66 AVMEFV--DIAGLVKGASTGEGLGNKFLANIREVSLIVHVVRCFEE 109 >gi|320165191|gb|EFW42090.1| translation-associated GTPase [Capsaspora owczarzaki ATCC 30864] Length = 412 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 18/108 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVKEGYK------------- 206 ++GI+G+PN GKS+ +++ + +++PF T+ PN G++K K Sbjct: 33 EVGILGMPNVGKSSLFNALSGGLNAEASNFPFCTINPNFGVLKVDDKALATIAQHIATQR 92 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 E + DI G++K A QGAG+G++FL H + L+H+V ++ Sbjct: 93 VVQAEVRIVDIAGLVKGASQGAGLGNKFLSHVRQVDALMHVVRCFPDD 140 >gi|308178024|ref|YP_003917430.1| translation-associated GTPase [Arthrobacter arilaitensis Re117] gi|307745487|emb|CBT76459.1| putative translation-associated GTPase [Arthrobacter arilaitensis Re117] Length = 367 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/153 (32%), Positives = 69/153 (45%), Gaps = 40/153 (26%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI+GLPN GKST ++TRA+ A+YPF T+ PN+G+V G + + Sbjct: 5 IGIVGLPNVGKSTMFNALTRAQVLAANYPFATIEPNVGVVPLPDSRLKVLAGIFGSERIL 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL----------------- 247 A DI GI+K A +G G+G++FL + + A Sbjct: 65 PATVSFVDIAGIVKGASEGEGLGNKFLATIREADAICQVTRAFVNDDVIHVNGKVDPASD 124 Query: 248 -----EENVQAAYQCILDELSAYNSELR-KKIE 274 E + A Q I ++L ELR KKIE Sbjct: 125 IETIATELILADLQTIENQLPRLEKELRTKKIE 157 >gi|15620037|gb|AAL03466.1| probable GTP-binding protein [Rickettsia conorii str. Malish 7] Length = 379 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 28/126 (22%) Query: 144 GILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNL---- 198 +L EK + LKL GI+GLPN GKST ++T ++ A+YPF T+ PN Sbjct: 7 NVLFTEKFMTLKL------GIVGLPNVGKSTLFNALTASQAADAANYPFCTIEPNSSKVL 60 Query: 199 ---------------GIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHI 243 G + Y EF+ DI G++K A +G G+G++FL H +LH+ Sbjct: 61 VPDARLHKLASLAGSGKIIPSYIEFV--DIAGLVKGASKGEGLGNKFLSHIREVDAILHV 118 Query: 244 VSALEE 249 + E+ Sbjct: 119 LRCFED 124 >gi|88658475|ref|YP_506981.1| translation-associated GTPase [Ehrlichia chaffeensis str. Arkansas] gi|88599932|gb|ABD45401.1| GTP-binding protein YchF [Ehrlichia chaffeensis str. Arkansas] Length = 362 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 19/117 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLG--IVKEG------------- 204 + GI+GLPN GKST ++T+ ++A+YPF T+ PN+G IV++ Sbjct: 4 NCGIVGLPNVGKSTLFNALTQTMVAEVANYPFCTIEPNIGKAIVQDHRLKTLANIASSKK 63 Query: 205 --YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI 258 Y + DI G++ A QG G+G++FL H ++H++ ++N+ Q + Sbjct: 64 IIYNQVECVDIAGLVSGASQGEGLGNKFLSHIREVDAIIHVLRCFGDQNISHVNQTV 120 >gi|261337251|ref|ZP_05965135.1| GTP-binding protein YchF [Bifidobacterium gallicum DSM 20093] gi|270277610|gb|EFA23464.1| GTP-binding protein YchF [Bifidobacterium gallicum DSM 20093] Length = 365 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 IGI+GLPN GKST ++TR +YPF T+ PN G+V K +LA Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGVVPLPDKRLPVLAELVHTQKVV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A E++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDD 110 >gi|33595509|ref|NP_883152.1| translation-associated GTPase [Bordetella parapertussis 12822] gi|33565587|emb|CAE40230.1| conserved hypothetical protein [Bordetella parapertussis] Length = 363 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T A +YPF T+ PN+G+V+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTGAGIAAENYPFCTIEPNVGVVEVPDPRLDKLAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++ A QG G+G++FL H T+ ++++V E+ Sbjct: 66 ATVEFVDIAGLVAGASQGEGLGNQFLSHIRETNAIVNVVRCFED 109 >gi|240274006|gb|EER37524.1| GTP-binding protein [Ajellomyces capsulatus H143] gi|325095610|gb|EGC48920.1| GTP-binding protein [Ajellomyces capsulatus H88] Length = 363 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ +T+ K ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 60 ARIALVGFPSVGKSTFLSKITKTKSEVAAYSFTTLTAIPGVLEYGGAEIQILDLPGIIEG 119 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + +++ ++ A + Q A Sbjct: 120 AAEGKGRGRQVISAAKTSDLIMMVLDATKRAEQRA 154 >gi|313205563|ref|YP_004044740.1| GTP-binding protein ychf [Riemerella anatipestifer DSM 15868] gi|312444879|gb|ADQ81234.1| GTP-binding protein YchF [Riemerella anatipestifer DSM 15868] gi|315022710|gb|EFT35735.1| GTP-binding and nucleic acid-binding protein YchF [Riemerella anatipestifer RA-YM] gi|325335009|gb|ADZ11283.1| Predicted GTPase, probable translation factor [Riemerella anatipestifer RA-GD] Length = 363 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------- 209 GI+GLPN GKST ++ AK + A+YPF T+ PNLG V + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANYPFCTIEPNLGTVSVPDQRLFELEKLVNPERVLP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++K A +G G+G++FL + ++H++ + Sbjct: 64 AVVEIVDIAGLVKGASRGEGLGNQFLANIRECEAIIHVLRCFD 106 >gi|225557879|gb|EEH06164.1| GTP-binding protein [Ajellomyces capsulatus G186AR] Length = 363 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ +T+ K ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 60 ARIALVGFPSVGKSTFLSKITKTKSEVAAYSFTTLTAIPGVLEYGGAEIQILDLPGIIEG 119 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + +++ ++ A + Q A Sbjct: 120 AAEGKGRGRQVISAAKTSDLIMMVLDATKRAEQRA 154 >gi|183984324|ref|YP_001852615.1| GTP binding protein [Mycobacterium marinum M] gi|183177650|gb|ACC42760.1| GTP binding protein [Mycobacterium marinum M] Length = 366 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 +GI+GLPN GKST ++TR A+YPF T+ PN G+V G + + Sbjct: 5 LGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNEGVVSLPDPRLDKLAELFGSERIV 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI G++K A +GAG+G++FL H + +V ++ Sbjct: 65 AAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFHDD 110 >gi|52424610|ref|YP_087747.1| translation-associated GTPase [Mannheimia succiniciproducens MBEL55E] gi|52306662|gb|AAU37162.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 363 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERTLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V + Q D++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVSGQINPADDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 DTINTEL 132 >gi|322378893|ref|ZP_08053310.1| Obg-like protein [Helicobacter suis HS1] gi|321148703|gb|EFX43186.1| Obg-like protein [Helicobacter suis HS1] Length = 367 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 19/109 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIV-----------------KE 203 IGI+GLPN GKS+ ++TR + + A+YPF T+ PN +V K Sbjct: 7 IGIVGLPNVGKSSLFNALTRTTQAQSANYPFCTIDPNKAVVDVPDARLKELARIVKPEKI 66 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 + DI G+IK A QG G+G++FL V+LH+V E EN+ Sbjct: 67 QHSSVEFVDIAGLIKGASQGEGLGNQFLGAVRECAVILHVVRCFEDENI 115 >gi|262170836|ref|ZP_06038514.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio mimicus MB-451] gi|261891912|gb|EEY37898.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio mimicus MB-451] Length = 363 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 27/151 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E EN+ A L+++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVSPLEDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 N EL L+ +D+ + L + K Sbjct: 126 EVINLEL-------ALADLDSCERAILRQSK 149 >gi|229817776|ref|ZP_04448058.1| hypothetical protein BIFANG_03048 [Bifidobacterium angulatum DSM 20098] gi|229785565|gb|EEP21679.1| hypothetical protein BIFANG_03048 [Bifidobacterium angulatum DSM 20098] Length = 364 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 IGI+GLPN GKST ++TR +YPF T+ PN G+V K +LA Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGVVPLPDKRLPVLAKLVHTEKIV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A E++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDD 110 >gi|154271494|ref|XP_001536600.1| GTP-binding protein 1 [Ajellomyces capsulatus NAm1] gi|150409270|gb|EDN04720.1| GTP-binding protein 1 [Ajellomyces capsulatus NAm1] Length = 363 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ +T+ K ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 60 ARIALVGFPSVGKSTFLSKITKTKSEVAAYSFTTLTAIPGVLEYGGAEIQILDLPGIIEG 119 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + +++ ++ A + Q A Sbjct: 120 AAEGKGRGRQVISTAKTSDLIMMVLDATKRAEQRA 154 >gi|116671377|ref|YP_832310.1| GTP-dependent nucleic acid-binding protein EngD [Arthrobacter sp. FB24] gi|116611486|gb|ABK04210.1| GTP-binding protein YchF [Arthrobacter sp. FB24] Length = 368 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 18/114 (15%) Query: 154 LKLKLIA-DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE--------- 203 ++L L+A IGI+GLPN GKST ++TR + A+YPF T+ PN+G+V Sbjct: 3 VELVLVALTIGIVGLPNVGKSTLFNALTRNQVLAANYPFATIEPNVGVVNLPDPRLAKLA 62 Query: 204 ---GYKEFILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 G + + A DI GI+K A +G G+G++FL + + +V ++ Sbjct: 63 AVFGSQRLLPAPVSFVDIAGIVKGASEGEGLGNKFLANIREAEAIAQVVRVFDD 116 >gi|325104812|ref|YP_004274466.1| GTP-binding protein YchF [Pedobacter saltans DSM 12145] gi|324973660|gb|ADY52644.1| GTP-binding protein YchF [Pedobacter saltans DSM 12145] Length = 366 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDDRLTKLAELVNPQKIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G++K A +G G+G++FL + T+ ++H++ ++ Sbjct: 66 NTIEIVDIAGLVKGASKGEGLGNQFLGNIRATNAIIHVLRCFDD 109 >gi|258626131|ref|ZP_05720979.1| GTP-dependent nucleic acid-binding protein engD [Vibrio mimicus VM603] gi|258581486|gb|EEW06387.1| GTP-dependent nucleic acid-binding protein engD [Vibrio mimicus VM603] Length = 369 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 27/151 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 12 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPCLDALAEIVKPERILP 71 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E EN+ A L+++ Sbjct: 72 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVSPLEDI 131 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 N EL L+ +D+ + L + K Sbjct: 132 EVINLEL-------ALADLDSCERAILRQNK 155 >gi|300727539|ref|ZP_07060930.1| GTP-binding protein YchF [Prevotella bryantii B14] gi|299775242|gb|EFI71843.1| GTP-binding protein YchF [Prevotella bryantii B14] Length = 367 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIEPNLGVITVPDERLNKLAEIVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + ++H++ + + Sbjct: 66 ATCEIVDIAGLVKGASKGEGLGNKFLGNIRECDAIIHVIRCFDND 110 >gi|253997200|ref|YP_003049264.1| GTP-dependent nucleic acid-binding protein EngD [Methylotenera mobilis JLW8] gi|253983879|gb|ACT48737.1| GTP-binding protein YchF [Methylotenera mobilis JLW8] Length = 361 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 32/152 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VKE 203 GI+GLPN GKST ++T+A +YPF T+ PN+GI V+ Sbjct: 4 GIVGLPNVGKSTLFNAITKAGIAAENYPFCTIEPNVGIVEVPDTRLQPLIDIVKPQRVQP 63 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 EF+ DI G++ A +G G+G++FL + T + H+V ++ +D LS Sbjct: 64 AIVEFV--DIAGLVAGASKGEGLGNKFLANIRETDAISHVVRCFDDGNVVHVAGKVDPLS 121 Query: 264 ---AYNSELRKKIEIVGLSQIDTVDSDTLARK 292 N+EL L+ ++TV+ TL R+ Sbjct: 122 DIEVINTEL-------ALADMETVEK-TLQRE 145 >gi|224534393|ref|ZP_03674971.1| GTP-binding protein YchF [Borrelia spielmanii A14S] gi|224514495|gb|EEF84811.1| GTP-binding protein YchF [Borrelia spielmanii A14S] Length = 368 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST +S+T +K +IA+YPF T+ PN+GIV+ Sbjct: 6 GIVGLPNVGKSTLFSSLTSSKVEIANYPFCTIEPNVGIVEIPDERLLKIAECVVPQKIIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A G G+G+RFL + +++H+V EE Sbjct: 66 AVMEFV--DIAGLVKGASTGEGLGNRFLANIREVSLIVHVVRCFEE 109 >gi|209516541|ref|ZP_03265395.1| GTP-binding protein YchF [Burkholderia sp. H160] gi|209502982|gb|EEA02984.1| GTP-binding protein YchF [Burkholderia sp. H160] Length = 364 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDTRLKALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++ A +G G+G++FL + T + H+V E +NV I L ++ Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVANKIDPLSDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 EVINTEL 132 >gi|325294907|ref|YP_004281421.1| GTP-binding protein YchF [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065355|gb|ADY73362.1| GTP-binding protein YchF [Desulfurobacterium thermolithotrophum DSM 11699] Length = 366 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 23/112 (20%) Query: 161 DIGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIV----KEGYK--------- 206 + GI+GLPN GKST ++T +K + A+YPF T+ PN+GIV K YK Sbjct: 4 NCGIVGLPNVGKSTLFNALTNTSKAEAANYPFCTIEPNVGIVEVLDKRLYKIAEIVKPEK 63 Query: 207 ------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL + + H+V +ENV Sbjct: 64 ITPTTIEFV--DIAGLVKGASKGEGLGNQFLANIRNVDAIAHVVRCFSDENV 113 >gi|193215391|ref|YP_001996590.1| GTP-dependent nucleic acid-binding protein EngD [Chloroherpeton thalassium ATCC 35110] gi|193088868|gb|ACF14143.1| GTP-binding protein YchF [Chloroherpeton thalassium ATCC 35110] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI- 209 GI+GLPN GKST ++T + +YPF T+ PN+G V K I Sbjct: 6 GIVGLPNVGKSTLFNAITAQQVDAQNYPFCTIEPNVGTVAVPDPRLKPLSQITKTKTIIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 L DI G+++ A +G G+G++FL H ++H+V E++ Sbjct: 66 ATLELVDIAGLVRGASKGEGLGNQFLSHIREVDAIIHVVRCFEDS 110 >gi|196013059|ref|XP_002116391.1| hypothetical protein TRIADDRAFT_30808 [Trichoplax adhaerens] gi|190580982|gb|EDV21061.1| hypothetical protein TRIADDRAFT_30808 [Trichoplax adhaerens] Length = 386 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 20/128 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------- 209 GI+GLPN GKSTF +T++ ++PF T+ P + E Y + Sbjct: 25 GIVGLPNVGKSTFFNVLTKSSAAAENFPFCTIVP---VPDERYDFLVDSFKPASKVPAYL 81 Query: 210 -LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---ELSAY 265 + DI G+++ AH+G G+G+ FL H + + H+V A +++ + +++ +L Sbjct: 82 HVTDIAGLVEGAHEGKGLGNAFLSHIKACDAIFHVVRAFDDDDVTHVEGVVNPVRDLEVI 141 Query: 266 NSELRKKI 273 + ELR K+ Sbjct: 142 HEELRLKV 149 >gi|154151267|ref|YP_001404885.1| translation-associated GTPase [Candidatus Methanoregula boonei 6A8] gi|153999819|gb|ABS56242.1| GTP-binding protein, HSR1-related [Methanoregula boonei 6A8] Length = 389 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 22/106 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------E 203 + + G PN GKSTF + T A +IA+YPFTT+ PN G+ + Sbjct: 4 LALAGKPNCGKSTFFKAATMANAEIANYPFTTINPNFGVAYVRTTCPCKGLDLTCGHCID 63 Query: 204 GYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G + F+ L D+ G++ +AH+G G+G++FL + + +LH++ A Sbjct: 64 GVR-FVAVNLIDVAGLVPDAHKGKGLGNQFLDNLRQADAILHVIDA 108 >gi|304321412|ref|YP_003855055.1| GTP-binding protein [Parvularcula bermudensis HTCC2503] gi|303300314|gb|ADM09913.1| GTP-binding protein [Parvularcula bermudensis HTCC2503] Length = 365 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 27/156 (17%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN+G V G E I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNVGDVAVPEPRIAKLAEIAGSAEII 65 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 A DI G++K A QG G+G++FL + V+++++ E++ + +D ++ Sbjct: 66 PARIQFVDIAGLVKGASQGEGLGNQFLANIREVDVVVYVLRCFEDDDITHVEGRVDPIAD 125 Query: 265 YNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 + EIV +++ D ++L ++++ LA + Sbjct: 126 F--------EIVE-TELMLADLESLEKRRSSLAKKA 152 >gi|118616059|ref|YP_904391.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium ulcerans Agy99] gi|118568169|gb|ABL02920.1| GTP binding protein [Mycobacterium ulcerans Agy99] Length = 366 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 +GI+GLPN GKST ++TR A+YPF T+ PN G+V G + + Sbjct: 5 LGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNEGVVSLPDPRLDKLAELFGSERIV 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI G++K A +GAG+G++FL H + +V ++ Sbjct: 65 AAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFHDD 110 >gi|304383645|ref|ZP_07366104.1| GTP-binding protein YchF [Prevotella marshii DSM 16973] gi|304335169|gb|EFM01440.1| GTP-binding protein YchF [Prevotella marshii DSM 16973] Length = 366 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIEPNVGVITVPDERLTRLAELVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 + DI G++K A +G G+G++FL + T ++H++ +EN+ Sbjct: 66 ATCEIVDIAGLVKGASKGEGLGNKFLGNIRETDAIIHVLRCFDDENI 112 >gi|262404530|ref|ZP_06081085.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio sp. RC586] gi|262349562|gb|EEY98700.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio sp. RC586] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 31/153 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRMDALAAIVKPERILP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ A L+ Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVSPLE 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++ N EL LS +D+ + L + K Sbjct: 124 DIEVINLEL-------ALSDLDSCERAILRQSK 149 >gi|189345890|ref|YP_001942419.1| GTP-dependent nucleic acid-binding protein EngD [Chlorobium limicola DSM 245] gi|189340037|gb|ACD89440.1| GTP-binding protein YchF [Chlorobium limicola DSM 245] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFI----------- 209 GI+GLPN GKST ++T + + A+YPF T+ PN+G +V + I Sbjct: 6 GIVGLPNVGKSTLFNAITAKQAEAANYPFCTIEPNVGTVLVPDERMHLIANVVKTPTLVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+++ A +G G+G++FL H ++H+V +++ Sbjct: 66 ATLEIVDIAGLVRGASKGEGLGNQFLSHIREVDAIVHVVRCFDDS 110 >gi|123966535|ref|YP_001011616.1| GTP-dependent nucleic acid-binding protein EngD [Prochlorococcus marinus str. MIT 9515] gi|123200901|gb|ABM72509.1| probable GTP-binding protein [Prochlorococcus marinus str. MIT 9515] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 40/192 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GIIGLPN GKST F A V AK + A++PF T+ PN GIV Sbjct: 5 GIIGLPNVGKSTLFNALVENAKAQAANFPFCTIEPNKGIVSVPDHRLHQLATLSSSQNVI 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 EF+ DI G++K A +G G+G++FL + ++H+V E++ +D L Sbjct: 65 PTKIEFV--DIAGLVKGASKGEGLGNKFLSNIREVDAIIHVVRCFEDSEVIHVSGKIDPL 122 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + IEI+ L +++ D L +++ + Q +S +LE + Sbjct: 123 --------EDIEIINL-ELNLADLTQLQKRRERIKKQVK------TSKEAQQEDALLEKI 167 Query: 323 HDKI---FSIRG 331 DK+ S+R Sbjct: 168 EDKLQKGLSVRS 179 >gi|134096056|ref|YP_001101131.1| GTP-binding protein [Herminiimonas arsenicoxydans] gi|133739959|emb|CAL63010.1| GTP-dependent nucleic acid-binding protein EngD [Herminiimonas arsenicoxydans] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRLQALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL H T ++++V E++ Sbjct: 66 ATVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDD 110 >gi|94676985|ref|YP_588744.1| translation-associated GTPase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94220135|gb|ABF14294.1| GTP-binding protein YchF [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 356 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--------------IVK-----E 203 GIIGLPN GKST ++T++ A++PF T+ PN+G IVK Sbjct: 6 GIIGLPNVGKSTLFNALTKSHIAAANFPFCTIEPNIGMLSVPDDRLNQIASIVKPKRIVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ D G++KNA QG G+G++FL V+ H+V E+ Sbjct: 66 TTIEFV--DTAGLVKNASQGEGLGNQFLTKIREVEVIAHVVRCFED 109 >gi|156101359|ref|XP_001616373.1| GTP-binding protein [Plasmodium vivax SaI-1] gi|148805247|gb|EDL46646.1| GTP-binding protein, putative [Plasmodium vivax] Length = 182 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 53/93 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I +IG P+ GKST L+ +T +IADY FTTL GI+ + L D+PGII+ Sbjct: 84 ARICLIGFPSVGKSTLLSKITSTTSEIADYEFTTLTCKPGIISYKDSKIQLLDLPGIIQG 143 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A +G G G + + + +++ I+ A +N Q Sbjct: 144 ASEGRGRGRQVIAVAKSCDMIMMILDATRDNSQ 176 >gi|313676980|ref|YP_004054976.1| GTP-binding protein ychf [Marivirga tractuosa DSM 4126] gi|312943678|gb|ADR22868.1| GTP-binding protein YchF [Marivirga tractuosa DSM 4126] Length = 365 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 59/105 (56%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST +++ AK + A++PF T+ PN+G++ + +E + Sbjct: 6 GIVGLPNVGKSTLFNALSNAKAEAANFPFCTIDPNVGVISVPDERLDILEELVNPNKLVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H+V E++ Sbjct: 66 TIIEFVDIAGLVEGASKGEGLGNKFLGNIREVDAIVHVVRCFEDD 110 >gi|294494880|ref|YP_003541373.1| GTP-binding conserved hypothetical protein TIGR00650 [Methanohalophilus mahii DSM 5219] gi|292665879|gb|ADE35728.1| GTP-binding conserved hypothetical protein TIGR00650 [Methanohalophilus mahii DSM 5219] Length = 394 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 22/106 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI------------------VKE 203 IG+ G PNAGKSTF + T A+ IA+YPFTT+ N GI ++ Sbjct: 5 IGLAGKPNAGKSTFFKAATMAEVDIANYPFTTIDANRGITYVRTTCPCIERDKRCGNCED 64 Query: 204 GYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G + F+ + D+ G++ +AHQG G+G+ FL + ++H++ A Sbjct: 65 GIR-FVPIEIIDVAGLVPDAHQGRGLGNAFLDELSQAQAIIHVIDA 109 >gi|240171089|ref|ZP_04749748.1| translation-associated GTPase [Mycobacterium kansasii ATCC 12478] Length = 366 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 +GI+GLPN GKST ++TR A+YPF T+ PN G+V G + + Sbjct: 5 LGIVGLPNVGKSTLFNALTRNDVVAANYPFATIEPNEGVVSLPDSRLDKLAELFGSERIV 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI G++K A +GAG+G++FL H + +V ++ Sbjct: 65 PAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFADD 110 >gi|33861694|ref|NP_893255.1| translation-associated GTPase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640062|emb|CAE19597.1| probable GTP-binding protein [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 31/158 (19%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--------------- 206 GIIGLPN GKST F A V AK + A++PF T+ PN GIV + Sbjct: 5 GIIGLPNVGKSTLFNALVENAKAQAANFPFCTIEPNKGIVSVPDQRLQELGSLSSSQNII 64 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 EF+ DI G++K A +G G+G++FL + ++H+V E+ +D L Sbjct: 65 PTKIEFV--DIAGLVKGASKGEGLGNKFLSNIREVDAIVHVVRCFEDTEVIHVSGKIDPL 122 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 IEI+ L +++ D L +++ + Q Sbjct: 123 D--------DIEIINL-ELNLADLSQLQKRRERIKKQV 151 >gi|226939278|ref|YP_002794349.1| GTP-dependent nucleic acid-binding protein EngD [Laribacter hongkongensis HLHK9] gi|226714202|gb|ACO73340.1| YchF [Laribacter hongkongensis HLHK9] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VKE 203 GI+GLPN GKST ++T+A + A+YPF T+ PN+GI V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVEVPDPRLDELSKIVNPQRVQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL + T ++++V E+ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFED 109 >gi|154302963|ref|XP_001551890.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10] gi|150855149|gb|EDN30341.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10] Length = 364 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ +T+ K +A Y FTTL G+++ G E + D+PGII+ Sbjct: 58 ARIALVGFPSVGKSTFLSKITKTKSVVAAYSFTTLTAIPGVLEYGGAEIQILDLPGIIEG 117 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A ++ Q A Sbjct: 118 AAEGKGRGRQVISAAKTSDLILMVLDATKKAEQRA 152 >gi|296118155|ref|ZP_06836736.1| GTP-binding protein YchF [Corynebacterium ammoniagenes DSM 20306] gi|295968713|gb|EFG81957.1| GTP-binding protein YchF [Corynebacterium ammoniagenes DSM 20306] Length = 364 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 22/129 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY-KEFIL 210 +GI+GLPN GKST ++TR+ A+YPF T+ PN+G+V+ E + E IL Sbjct: 8 LGIVGLPNVGKSTLFNALTRSDILAANYPFATIEPNVGLVELPDPRLGRLAEIFGSERIL 67 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILD 260 DI GI+K A +G G+G+ FL + + +V A ++ V A D Sbjct: 68 PATVSFVDIAGIVKGASEGEGMGNAFLSNIREADAICQVVRAFSDDNVIHVDGAVNPTAD 127 Query: 261 ELSAYNSEL 269 +S N+EL Sbjct: 128 -ISVINTEL 135 >gi|291456588|ref|ZP_06595978.1| GTP-binding protein YchF [Bifidobacterium breve DSM 20213] gi|291381865|gb|EFE89383.1| GTP-binding protein YchF [Bifidobacterium breve DSM 20213] Length = 366 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 IGI+GLPN GKST ++TR +YPF T+ PN GIV K + E ++ Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDDRLPVLAKLVHTEKVV 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A E++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDD 110 >gi|152980990|ref|YP_001354821.1| hypothetical protein mma_3131 [Janthinobacterium sp. Marseille] gi|151281067|gb|ABR89477.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRLQALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL H T ++++V E++ Sbjct: 66 ATVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDD 110 >gi|56750976|ref|YP_171677.1| GTP-dependent nucleic acid-binding protein EngD [Synechococcus elongatus PCC 6301] gi|81299365|ref|YP_399573.1| GTP-dependent nucleic acid-binding protein EngD [Synechococcus elongatus PCC 7942] gi|56685935|dbj|BAD79157.1| probable GTP binding protein [Synechococcus elongatus PCC 6301] gi|81168246|gb|ABB56586.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST F A V AK + A++PF T+ PN+G+V Sbjct: 5 GIVGLPNVGKSTLFNALVANAKAQAANFPFCTIEPNVGVVAVPDTRLAALTEISSSEQTV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QG G+G++FL H + ++ +V +++ Sbjct: 65 PTRIEFV--DIAGLVKGASQGEGLGNQFLSHIRQVDAIVQVVRCFDDD 110 >gi|73666734|ref|YP_302750.1| translation-associated GTPase [Ehrlichia canis str. Jake] gi|72393875|gb|AAZ68152.1| Conserved hypothetical protein 92 [Ehrlichia canis str. Jake] Length = 362 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 19/117 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLG--IVKEG------------- 204 + GI+GLPN GKST ++T+ ++A+YPF T+ PN+G IV++ Sbjct: 4 NCGIVGLPNVGKSTLFNALTQTMVAEVANYPFCTIEPNVGKAIVQDHRLKTLAQMASSKK 63 Query: 205 --YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI 258 Y + DI G++ A QG G+G++FL H ++H++ ++N+ Q + Sbjct: 64 IIYNQVECVDIAGLVSGASQGEGLGNKFLSHIREVDAIIHVLRCFSDQNISHVNQTV 120 >gi|332671413|ref|YP_004454421.1| GTP-binding protein YchF [Cellulomonas fimi ATCC 484] gi|332340451|gb|AEE47034.1| GTP-binding protein YchF [Cellulomonas fimi ATCC 484] Length = 358 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI+GLPN GKST ++TRA+ A+YPF T+ PN+G+V G + + Sbjct: 5 IGIVGLPNVGKSTLFNALTRAQVLAANYPFATIEPNVGVVPLPDPRLQVLADVFGSERIL 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI GI+K A +G G+G++FL + + + A + Sbjct: 65 PATVSFVDIAGIVKGASEGEGLGNKFLANIREADAICQVTRAFAD 109 >gi|317504242|ref|ZP_07962232.1| GTP-dependent nucleic acid-binding protein EngD [Prevotella salivae DSM 15606] gi|315664612|gb|EFV04289.1| GTP-dependent nucleic acid-binding protein EngD [Prevotella salivae DSM 15606] Length = 367 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------KEGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PNLG++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQSANFPFCTIEPNLGVIIVPDERLNKLAEIVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + ++H++ +++ Sbjct: 66 ATCEIVDIAGLVKGASKGEGLGNKFLGNIRECDAIIHVIRCFDDD 110 >gi|237750302|ref|ZP_04580782.1| translation-associated GTPase [Helicobacter bilis ATCC 43879] gi|229374196|gb|EEO24587.1| translation-associated GTPase [Helicobacter bilis ATCC 43879] Length = 366 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV------------------- 201 IGI+GLPN GKST ++T+A+ + A+YPF T+ PN +V Sbjct: 5 IGIVGLPNVGKSTTFNALTKAQNAEAANYPFCTIEPNKAVVPVPDSRLDELAKIVNPQKI 64 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + EF+ DI G+++ A +G G+G++FL + + ++LHIV E++ Sbjct: 65 QHSVVEFV--DIAGLVRGASKGEGLGNQFLANIKEADMILHIVRCFEDS 111 >gi|293375545|ref|ZP_06621819.1| GTP-binding protein YchF [Turicibacter sanguinis PC909] gi|325845113|ref|ZP_08168424.1| GTP-binding protein YchF [Turicibacter sp. HGF1] gi|292645762|gb|EFF63798.1| GTP-binding protein YchF [Turicibacter sanguinis PC909] gi|325488855|gb|EGC91253.1| GTP-binding protein YchF [Turicibacter sp. HGF1] Length = 366 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 26/155 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITQAGIEAANYPFATIDPNVGVVEVPDERLNKLTELVSPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 F DI G+++ A G G+G++FL + + +V E+ + +D + Sbjct: 66 TTFEFTDIAGLVRGASNGEGLGNKFLANIREVDAITQVVRCFEDGNIIHVEGSVDPV--- 122 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 + +E++ L I D + + R+ LA Q Sbjct: 123 -----RDVEVINLELI-LADMEQVDRRLTRLAKQA 151 >gi|296128832|ref|YP_003636082.1| GTP-binding protein YchF [Cellulomonas flavigena DSM 20109] gi|296020647|gb|ADG73883.1| GTP-binding protein YchF [Cellulomonas flavigena DSM 20109] Length = 358 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGY-KEFIL 210 IGI+GLPN GKST ++TRA+ A+YPF T+ PN+G+V E + E IL Sbjct: 5 IGIVGLPNVGKSTLFNALTRAQVLAANYPFATIEPNVGVVPLPDPRLATLAEIFGSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI+K A +G G+G++FL + + + A + Sbjct: 65 PATVSFVDIAGIVKGASEGEGLGNKFLANIREADAICQVTRAFAD 109 >gi|213965535|ref|ZP_03393730.1| GTP-binding protein YchF [Corynebacterium amycolatum SK46] gi|213951919|gb|EEB63306.1| GTP-binding protein YchF [Corynebacterium amycolatum SK46] Length = 362 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKE---- 207 +GI+GLPN GKST ++TR A+YPF T+ PN+G+V+ E YK Sbjct: 8 LGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGVVELPDPRLNKLAEIYKSKRIV 67 Query: 208 ---FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V ++ Sbjct: 68 PATVSFVDIAGIVKGASEGEGLGNKFLANIREADAICQVVRVFNDD 113 >gi|28493606|ref|NP_787767.1| GTP-dependent nucleic acid-binding protein EngD [Tropheryma whipplei str. Twist] gi|28572802|ref|NP_789582.1| translation-associated GTPase [Tropheryma whipplei TW08/27] gi|28410935|emb|CAD67320.1| conserved ATP/GTP binding protein [Tropheryma whipplei TW08/27] gi|28476648|gb|AAO44736.1| GTP-binding protein [Tropheryma whipplei str. Twist] Length = 344 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++TR K A+YPF T+ PN+GI K Sbjct: 5 VGIVGLPNVGKSTLFNALTRGKALAANYPFATIEPNVGIAPLADARLEKLSTIFASEKII 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+++ A +G G+G +FL + + H+V ++ Sbjct: 65 FATVSFVDIAGLVEGASRGEGLGSKFLANIREVDAIAHVVRVFSDS 110 >gi|152979078|ref|YP_001344707.1| translation-associated GTPase [Actinobacillus succinogenes 130Z] gi|150840801|gb|ABR74772.1| GTP-binding protein YchF [Actinobacillus succinogenes 130Z] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + D++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPADDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 DTINTEL 132 >gi|326800523|ref|YP_004318342.1| GTP-binding protein YchF [Sphingobacterium sp. 21] gi|326551287|gb|ADZ79672.1| GTP-binding protein YchF [Sphingobacterium sp. 21] Length = 366 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVISVPDERLNKLAELVNPQRVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++K A +G G+G++FL + T+ ++H++ + Sbjct: 66 NTIEIVDIAGLVKGASKGEGLGNQFLGNIRTTNAIIHVLRCFD 108 >gi|256028266|ref|ZP_05442100.1| GTP-dependent nucleic acid-binding protein EngD [Fusobacterium sp. D11] gi|289766198|ref|ZP_06525576.1| GTP-binding protein [Fusobacterium sp. D11] gi|289717753|gb|EFD81765.1| GTP-binding protein [Fusobacterium sp. D11] Length = 364 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 33/158 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK---EGYKEFI-------- 209 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V E E Sbjct: 4 IGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNIGMVTVPDERLNELAKIVNPQKI 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 DI G++K A +G G+G++FL + T + +V E +NV + L Sbjct: 64 VPATVEFVDIAGLVKGASKGEGLGNKFLSNIRSTSAICQVVRCFEDDNVIHVDGSVDPLR 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDS-----DTLARKK 293 ++ N+EL + I+T+D + LAR K Sbjct: 124 DIDVINTELI-------FADIETIDKAIEKHEKLARNK 154 >gi|241626482|ref|XP_002407922.1| GTP-binding protein, putative [Ixodes scapularis] gi|215501093|gb|EEC10587.1| GTP-binding protein, putative [Ixodes scapularis] Length = 397 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 22/149 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 +GI+GLPN GKSTF +T + ++PF T+ PN V F Sbjct: 25 VGIVGLPNVGKSTFFNVLTANQVPAENFPFCTIDPNESRVSVPDSRFDYLCDYFKPVSKV 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G++K A +G G+G+ FL H L H+ E+ +V+ + D Sbjct: 85 PAFLNVVDIAGLVKGASEGQGLGNAFLSHIRACDALFHLCRTFEDEDVTHVEGDVNPVRD 144 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 + N ELRKK E L+ +D ++ L Sbjct: 145 -MDIINEELRKKDEEYLLAIVDKMERTVL 172 >gi|21673124|ref|NP_661189.1| translation-associated GTPase [Chlorobium tepidum TLS] gi|21646199|gb|AAM71531.1| GTP-binding protein [Chlorobium tepidum TLS] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV---KEGYKEFI---------- 209 GI+GLPN GKST ++T + + A+YPF T+ PN+G V E Sbjct: 6 GIVGLPNVGKSTLFNAITAKQAEAANYPFCTIEPNVGTVLVPDPRLSELARVVKTPVIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+++ A +G G+G++FL H ++H+V E+ Sbjct: 66 AVLEIVDIAGLVRGASKGEGLGNQFLSHIREVDAIIHVVRCFED 109 >gi|319779118|ref|YP_004130031.1| GTP-binding and nucleic acid-binding protein YchF [Taylorella equigenitalis MCE9] gi|317109142|gb|ADU91888.1| GTP-binding and nucleic acid-binding protein YchF [Taylorella equigenitalis MCE9] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLAKLAEIVKPERVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++H+V E++ Sbjct: 66 ATVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAVVHVVRCFEDS 110 >gi|223940694|ref|ZP_03632533.1| GTP-binding protein YchF [bacterium Ellin514] gi|223890621|gb|EEF57143.1| GTP-binding protein YchF [bacterium Ellin514] Length = 367 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 22/107 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST +VTR K + A+YPF T+ PN+GIV Sbjct: 5 GIVGLPNVGKSTLFNAVTRTRKAQAANYPFCTIDPNVGIVTVPDSRLEVLKNIAKTTVII 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A G G+G++FL H ++ +V ++ Sbjct: 65 PAAVEFV--DIAGLVKGASAGEGLGNKFLTHIREVDAIVQVVRCFDD 109 >gi|123968846|ref|YP_001009704.1| GTP-dependent nucleic acid-binding protein EngD [Prochlorococcus marinus str. AS9601] gi|123198956|gb|ABM70597.1| probable GTP-binding protein [Prochlorococcus marinus str. AS9601] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 31/158 (19%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--------------- 206 GIIGLPN GKST F A V AK + A++PF T+ PN GIV + Sbjct: 5 GIIGLPNVGKSTLFNALVENAKAQAANFPFCTIEPNKGIVSVPDQRLQELGNLSSSQNII 64 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 EF+ DI G++K A +G G+G++FL + ++H+V E++ +D L Sbjct: 65 PTKIEFV--DIAGLVKGASKGEGLGNKFLSNIREVDAIVHVVRCFEDSDVIHVSGKVDPL 122 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 IEI+ L +++ D L +++ + Q Sbjct: 123 D--------DIEIINL-ELNLADLSQLQKRRERIKKQV 151 >gi|169835521|ref|ZP_02868709.1| GTP-binding protein Obg/CgtA [candidate division TM7 single-cell isolate TM7a] Length = 67 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/61 (55%), Positives = 44/61 (72%) Query: 104 LICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIG 163 +I DL + G+ I+A GG+GGFGNAHFKSS QAP A G LG+ + L+LKLIAD+G Sbjct: 7 IIADLVKNGETAIIARGGDGGFGNAHFKSSVRQAPKIAELGELGEMFELELELKLIADVG 66 Query: 164 I 164 + Sbjct: 67 L 67 >gi|261868209|ref|YP_003256131.1| GTP-dependent nucleic acid-binding protein EngD [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413541|gb|ACX82912.1| GTP-binding protein YchF [Aggregatibacter actinomycetemcomitans D11S-1] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + L+++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLNDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 DTINTEL 132 >gi|326773833|ref|ZP_08233115.1| GTP-binding protein YchF [Actinomyces viscosus C505] gi|326635972|gb|EGE36876.1| GTP-binding protein YchF [Actinomyces viscosus C505] Length = 371 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------ 209 IGI+GLPN GKST ++TRA A+YPF T+ PN+G+V + E Sbjct: 15 IGIVGLPNVGKSTLFNALTRATVLAANYPFATIEPNVGVVPLPDARLDKLAELFHSARVV 74 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI++ A +G G+G++FL + + + A E+ Sbjct: 75 PATVSFVDIAGIVRGASEGEGLGNQFLANIREADAICMVTRAFED 119 >gi|325067894|ref|ZP_08126567.1| GTP-binding protein YchF [Actinomyces oris K20] Length = 361 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------ 209 IGI+GLPN GKST ++TRA A+YPF T+ PN+G+V + E Sbjct: 5 IGIVGLPNVGKSTLFNALTRATVLAANYPFATIEPNVGVVPLPDARLDKLAELFHSARVV 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI++ A +G G+G++FL + + + A E+ Sbjct: 65 PATVSFVDIAGIVRGASEGEGLGNQFLANIREADAICMVTRAFED 109 >gi|269125348|ref|YP_003298718.1| GTP-binding protein YchF [Thermomonospora curvata DSM 43183] gi|268310306|gb|ACY96680.1| GTP-binding protein YchF [Thermomonospora curvata DSM 43183] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 39/164 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------KEGYKEFI------ 209 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V E E Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDPRLEKLAEIFGSAKIV 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE---------------- 248 DI GI++ A++G G+G++FL + T+ + ++ Sbjct: 65 PATVEFVDIAGIVRGAYEGQGLGNKFLANIRETNAICQVIRVFRDPDVTHVDGSVEPLRD 124 Query: 249 ------ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 E + A Q I L E R K + GL+ +D V + Sbjct: 125 IETINTELILADLQTIEKALPRLEKEARTKKDRDGLALVDAVKT 168 >gi|126696665|ref|YP_001091551.1| GTP-dependent nucleic acid-binding protein EngD [Prochlorococcus marinus str. MIT 9301] gi|126543708|gb|ABO17950.1| probable GTP-binding protein [Prochlorococcus marinus str. MIT 9301] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 31/158 (19%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--------------- 206 GIIGLPN GKST F A V AK + A++PF T+ PN GIV + Sbjct: 5 GIIGLPNVGKSTLFNALVENAKAQAANFPFCTIEPNKGIVSVPDQRLQELGNLSCSQNII 64 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 EF+ DI G++K A +G G+G++FL + ++H+V E++ +D L Sbjct: 65 PTKIEFV--DIAGLVKGASKGEGLGNKFLSNIREVDAIVHVVRCFEDSDVIHVSGKVDPL 122 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 IEI+ L +++ D L +++ + Q Sbjct: 123 D--------DIEIINL-ELNLADLSQLQKRRERIKKQV 151 >gi|294786011|ref|ZP_06751298.1| GTP-binding protein YchF [Fusobacterium sp. 3_1_27] gi|294486348|gb|EFG33711.1| GTP-binding protein YchF [Fusobacterium sp. 3_1_27] Length = 364 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 35/159 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK---EGYKEFI-------- 209 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V E E Sbjct: 4 IGIMGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNIGMVTVPDERLNELAKIVNPQKI 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCIL 259 DI G++K A +G G+G++FL + T + +V E++ V + + Sbjct: 64 VPATVEFVDIAGLVKGASKGEGLGNKFLSNIRSTSAICQVVRCFEDDNIIHVDGSVDPLR 123 Query: 260 DELSAYNSELRKKIEIVGLSQIDTVDS-----DTLARKK 293 D + N+EL + I+TVD + LAR K Sbjct: 124 D-IEVINTELI-------FADIETVDKAIEKHEKLARNK 154 >gi|296137294|ref|YP_003644536.1| GTP-binding protein YchF [Thiomonas intermedia K12] gi|295797416|gb|ADG32206.1| GTP-binding protein YchF [Thiomonas intermedia K12] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T++ +YPF T+ PN GIV+ Sbjct: 6 GIVGLPNVGKSTLFNALTQSAIPAENYPFCTIEPNTGIVELPDPRLDQLAAIVKPQRVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A QG G+G++FL H T ++++V E+ Sbjct: 66 AVVEFV--DIAGLVAGASQGEGLGNQFLAHIRETDAIINVVRCFED 109 >gi|32473563|ref|NP_866557.1| GTP-dependent nucleic acid-binding protein EngD [Rhodopirellula baltica SH 1] gi|32398243|emb|CAD78338.1| probable GTP-binding protein [Rhodopirellula baltica SH 1] gi|327541679|gb|EGF28203.1| translation-associated GTPase [Rhodopirellula baltica WH47] Length = 388 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 18/107 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------EGYKEFI---- 209 + GI+GLPN GKST ++T + + A+YPF T+ PN GIV +FI Sbjct: 27 EAGIVGLPNVGKSTLFNALTSSVAAQSANYPFCTIEPNEGIVSVPDSRLNRITDFIKPKK 86 Query: 210 -------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 L DI GI+K A +G G+G++FL H + ++ +V E+ Sbjct: 87 VIPSALKLVDIAGIVKGAAEGEGLGNKFLSHIRQVDAIMQVVRCFED 133 >gi|300863737|ref|ZP_07108668.1| GTP-dependent nucleic acid-binding protein EngD [Oscillatoria sp. PCC 6506] gi|300338244|emb|CBN53814.1| GTP-dependent nucleic acid-binding protein EngD [Oscillatoria sp. PCC 6506] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST F A V AK A++PF T+ PN+G+V Sbjct: 5 GIVGLPNVGKSTLFNALVANAKATAANFPFCTIEPNVGVVAVPDERLNVLSNICNSAQIV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QG G+G++FL H ++ +V E + Sbjct: 65 PTRIEFV--DIAGLVKGASQGEGLGNQFLSHIREVDAIVQVVRCFEND 110 >gi|188997516|ref|YP_001931767.1| GTP-binding protein YchF [Sulfurihydrogenibium sp. YO3AOP1] gi|188932583|gb|ACD67213.1| GTP-binding protein YchF [Sulfurihydrogenibium sp. YO3AOP1] Length = 370 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 18/107 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKE 207 ++GI+GLPN GKST ++T AK +A+YPF T+ PN+GIV E K Sbjct: 4 NVGIVGLPNVGKSTIFNALTETAKAGVANYPFCTIDPNVGIVNVPDERLYKIAELEKSKN 63 Query: 208 FILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + A DI G+++ A +G G+G++FL + + + H+V ++ Sbjct: 64 IVPATIEFVDIAGLVRGASKGEGLGNQFLANIRQVSAIAHVVRCFDD 110 >gi|294341598|emb|CAZ90015.1| GTP-dependent nucleic acid-binding protein engD [Thiomonas sp. 3As] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T++ +YPF T+ PN GIV+ Sbjct: 6 GIVGLPNVGKSTLFNALTQSAIPAENYPFCTIEPNTGIVELPDPRLDQLAAIVKPQRVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A QG G+G++FL H T ++++V E+ Sbjct: 66 AVVEFV--DIAGLVAGASQGEGLGNQFLAHIRETDAIINVVRCFED 109 >gi|260495639|ref|ZP_05815763.1| GTP-binding protein [Fusobacterium sp. 3_1_33] gi|260196822|gb|EEW94345.1| GTP-binding protein [Fusobacterium sp. 3_1_33] Length = 364 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 18/107 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK---EGYKEFI-------- 209 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V E E Sbjct: 4 IGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNIGMVTVPDERLNELAKIVNPQKI 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + +V E++ Sbjct: 64 VPATVEFVDIAGLVKGASKGEGLGNKFLSNIRSTSAICQVVRCFEDD 110 >gi|256828256|ref|YP_003156984.1| GTP-binding protein YchF [Desulfomicrobium baculatum DSM 4028] gi|256577432|gb|ACU88568.1| GTP-binding protein YchF [Desulfomicrobium baculatum DSM 4028] Length = 366 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 IGI+GLPN GKST ++T+A+ + A+YPF T+ PN +V Sbjct: 5 IGIVGLPNVGKSTLFNALTKAQNAESANYPFCTIEPNKAVVPVPDPRLAKLVELVNSQKI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + +FI DI G++K A QG G+G++FL + +LH+V E + Sbjct: 65 IQATVDFI--DIAGLVKGASQGEGLGNQFLANIRECDAILHVVRCFEND 111 >gi|224437406|ref|ZP_03658377.1| translation-associated GTPase [Helicobacter cinaedi CCUG 18818] gi|313143870|ref|ZP_07806063.1| translation-associated GTPase [Helicobacter cinaedi CCUG 18818] gi|313128901|gb|EFR46518.1| translation-associated GTPase [Helicobacter cinaedi CCUG 18818] Length = 366 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV------------------- 201 IGI+GLPN GKST ++T+A+ + A+YPF T+ PN +V Sbjct: 5 IGIVGLPNVGKSTTFNALTKAQNAEAANYPFCTIEPNKAVVPVPDSRLDELAKIVNPQKI 64 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + EF+ DI G+++ A +G G+G++FL + + ++LHIV E++ Sbjct: 65 QHSVVEFV--DIAGLVRGASKGEGLGNQFLANIKEADMILHIVRCFEDS 111 >gi|193216556|ref|YP_001999798.1| putative GTPase translation factor [Mycoplasma arthritidis 158L3-1] gi|193001879|gb|ACF07094.1| putative GTPase translation factor [Mycoplasma arthritidis 158L3-1] Length = 367 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST +++T + + A+Y FTT+ PN+ IV K Sbjct: 6 GIVGLPNVGKSTLFSALTLNEAESANYAFTTIEPNVAIVNLNDTRLEKLAKIVNTNKIVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F DI G+++ A +G G+G++FL + ++H+V E N Sbjct: 66 ATFQFVDIAGLVEGASKGEGLGNKFLANIREVDAIIHVVRCFENN 110 >gi|163761603|ref|ZP_02168674.1| GTP-binding protein [Hoeflea phototrophica DFL-43] gi|162281199|gb|EDQ31499.1| GTP-binding protein [Hoeflea phototrophica DFL-43] Length = 367 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++TR A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTRTAAAQAANYPFCTIEPNTGEVAVPDTRLKKLAEIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRIAFVDIAGLVRGASKGEGLGNKFLANIREVDAIVHVLRCFEDD 111 >gi|117929068|ref|YP_873619.1| GTP-dependent nucleic acid-binding protein EngD [Acidothermus cellulolyticus 11B] gi|117649531|gb|ABK53633.1| GTP-binding protein YchF [Acidothermus cellulolyticus 11B] Length = 373 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 20/128 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------------KEGYKEFI 209 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V G + Sbjct: 15 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIDPNVGVVGVPDPRLDVLARMFGSARIV 74 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL---DE 261 A DI G+++ A QG G+G++FL H T + +V ++ A + D+ Sbjct: 75 PATVTFVDIAGLVRGASQGQGLGNKFLAHIRETDAICQVVRVFTDSDVAHVAGRVDPADD 134 Query: 262 LSAYNSEL 269 + N+EL Sbjct: 135 IEVVNTEL 142 >gi|88704031|ref|ZP_01101746.1| Conserved hypothetical protein 92 [Congregibacter litoralis KT71] gi|88701858|gb|EAQ98962.1| Conserved hypothetical protein 92 [Congregibacter litoralis KT71] Length = 364 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++TRA ++PF T+ PN G+V KE Sbjct: 6 GIVGLPNVGKSTLFNALTRAGIDAENFPFCTIEPNAGVVPVPDPRQSKISELVKPQKEIA 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENV 112 >gi|189500923|ref|YP_001960393.1| GTP-dependent nucleic acid-binding protein EngD [Chlorobium phaeobacteroides BS1] gi|189496364|gb|ACE04912.1| GTP-binding protein YchF [Chlorobium phaeobacteroides BS1] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV---KEGYKEFI---------- 209 GI+GLPN GKST ++T + + +YPF T+ PN+G+V E ++ Sbjct: 6 GIVGLPNVGKSTLFNAITAKQAEAENYPFCTIEPNVGMVLVPDERLQKLADIVKTQTIIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 L DI G+++ A +G G+G++FL H ++H+V ++ Sbjct: 66 ATIELVDIAGLVRGASKGEGLGNQFLSHIREVDTIVHVVRCFDD 109 >gi|298253885|ref|ZP_06977472.1| GTPase, probable translation factor [Gardnerella vaginalis 5-1] gi|297532028|gb|EFH71003.1| GTPase, probable translation factor [Gardnerella vaginalis 5-1] Length = 362 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILA--------- 211 IGI+GLPN GKST ++TR +YPF T+ PN GIV Y+ +LA Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDYRLPVLAKLVNTEKIV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A ++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFNDD 110 >gi|85702765|ref|ZP_01033869.1| GTP-binding protein YchF [Roseovarius sp. 217] gi|85671693|gb|EAQ26550.1| GTP-binding protein YchF [Roseovarius sp. 217] Length = 365 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++TR A + A++PF T+ PN+G V G K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLDKLAEIAGSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + T + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFED 110 >gi|84494708|ref|ZP_00993827.1| putative GTP-binding protein [Janibacter sp. HTCC2649] gi|84384201|gb|EAQ00081.1| putative GTP-binding protein [Janibacter sp. HTCC2649] Length = 361 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V G ++ + Sbjct: 5 IGIVGLPNVGKSTMFNALTKNNVLAANYPFATIEPNVGVVPLPDERLARLAEIHGSEKIL 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI GI++ A +G G+G++FL + + +V A E+ Sbjct: 65 PAVVSFVDIAGIVRGASEGEGLGNKFLANIREADAICQVVRAFED 109 >gi|300741961|ref|ZP_07071982.1| GTP-binding protein YchF [Rothia dentocariosa M567] gi|300381146|gb|EFJ77708.1| GTP-binding protein YchF [Rothia dentocariosa M567] Length = 367 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI+GLPN GKST ++T A+YPF T+ PN+G+V G + + Sbjct: 5 IGIVGLPNVGKSTLFNALTGNTVLAANYPFATIDPNVGVVNLPDARLNRLAEIFGSERIL 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI GI+K A +G G+G++FL + H + +V A ++ Sbjct: 65 PATVSFVDIAGIVKGASEGEGLGNKFLANIREAHAIAQVVRAFDD 109 >gi|251793995|ref|YP_003008727.1| GTP-dependent nucleic acid-binding protein EngD [Aggregatibacter aphrophilus NJ8700] gi|247535394|gb|ACS98640.1| GTP-binding protein YchF [Aggregatibacter aphrophilus NJ8700] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + L+++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLNDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 ETINTEL 132 >gi|237809049|ref|YP_002893489.1| GTP-dependent nucleic acid-binding protein EngD [Tolumonas auensis DSM 9187] gi|237501310|gb|ACQ93903.1| GTP-binding protein YchF [Tolumonas auensis DSM 9187] Length = 363 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E I Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIIKPQRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|320532800|ref|ZP_08033579.1| GTP-binding protein YchF [Actinomyces sp. oral taxon 171 str. F0337] gi|320134991|gb|EFW27160.1| GTP-binding protein YchF [Actinomyces sp. oral taxon 171 str. F0337] Length = 361 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------ 209 IGI+GLPN GKST ++TRA A+YPF T+ PN+G+V + E Sbjct: 5 IGIVGLPNVGKSTLFNALTRATVLAANYPFATIEPNVGVVPLPDARLDKLAELFHSARVV 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI++ A +G G+G++FL + + + A E+ Sbjct: 65 PATVSFVDIAGIVRGASEGEGLGNQFLANIREADAICMVTRAFED 109 >gi|118576823|ref|YP_876566.1| GTPase [Cenarchaeum symbiosum A] gi|118195344|gb|ABK78262.1| GTPase [Cenarchaeum symbiosum A] Length = 395 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 22/105 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------------ 203 IG++G N GKSTF ++ T ++ ++PFTT+ PN+G+ Sbjct: 3 IGLLGKANVGKSTFFSAATETPVQVGNFPFTTIEPNVGVAYARTECACKVLGVQHETKFC 62 Query: 204 -GYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G F+ L D+ G++ AH+G G+G+RFL + VL+H+V Sbjct: 63 IGGTRFVPVGLIDVAGLVPGAHEGKGLGNRFLDDARQAEVLIHVV 107 >gi|16081954|ref|NP_394364.1| translation-associated GTPase [Thermoplasma acidophilum DSM 1728] gi|10640182|emb|CAC12034.1| GTP-binding protein Obg related protein [Thermoplasma acidophilum] Length = 382 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 27/131 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IG++G PN GKSTF ++ T+ + +I D+PFTT+ PNLG+ +EG Sbjct: 5 IGLVGEPNVGKSTFFSAATQNEAEIGDFPFTTVKPNLGMTFFTVKCPDTEIGARCNPREG 64 Query: 205 YKE-------FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV---SALEENVQAA 254 Y E + D+PG+I+ A +G G+G+ F+ ++ IV S + ++ + Sbjct: 65 YCENGIRHVPVQVIDVPGLIEGASEGRGMGNEFMDAIRDVDAIVLIVDVSSGSVDEIRKS 124 Query: 255 YQCILDELSAY 265 + DE+ + Sbjct: 125 ITLVTDEIRKW 135 >gi|237756385|ref|ZP_04584930.1| GTP-binding protein YchF [Sulfurihydrogenibium yellowstonense SS-5] gi|237691450|gb|EEP60513.1| GTP-binding protein YchF [Sulfurihydrogenibium yellowstonense SS-5] Length = 370 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 18/107 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKE 207 ++GI+GLPN GKST ++T AK +A+YPF T+ PN+GIV E K Sbjct: 4 NVGIVGLPNVGKSTIFNALTETAKAGVANYPFCTIDPNVGIVNVPDERLYKIAELEKSKN 63 Query: 208 FILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + A DI G+++ A +G G+G++FL + + + H+V ++ Sbjct: 64 IVPATIEFVDIAGLVRGASKGEGLGNQFLANIRQVSAIAHVVRCFDD 110 >gi|254515309|ref|ZP_05127370.1| GTP-binding protein YchF [gamma proteobacterium NOR5-3] gi|219677552|gb|EED33917.1| GTP-binding protein YchF [gamma proteobacterium NOR5-3] Length = 364 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++TRA ++PF T+ PN G+V KE Sbjct: 6 GIVGLPNVGKSTLFNALTRAGIDAENFPFCTIEPNAGVVPVPDPRQSKISELVKPQKEIA 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENV 112 >gi|167757570|ref|ZP_02429697.1| hypothetical protein CLORAM_03120 [Clostridium ramosum DSM 1402] gi|237735126|ref|ZP_04565607.1| translation-associated GTPase [Mollicutes bacterium D7] gi|167702567|gb|EDS17146.1| hypothetical protein CLORAM_03120 [Clostridium ramosum DSM 1402] gi|229381902|gb|EEO31993.1| translation-associated GTPase [Coprobacillus sp. D7] Length = 366 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T A+ + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITNAQVEAANYPFATIDPNVGVVEVPDYRLDKLTELVEPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F DI G++K A +G G+G++FL + T + +V + Sbjct: 66 TTFGFTDIAGLVKGASRGEGLGNKFLGNIRETDAICEVVRCFRD 109 >gi|196228717|ref|ZP_03127583.1| GTP-binding protein YchF [Chthoniobacter flavus Ellin428] gi|196226998|gb|EDY21502.1| GTP-binding protein YchF [Chthoniobacter flavus Ellin428] Length = 389 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 22/107 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST +VT+ K + A+YPF T+ PN+G+V Sbjct: 5 GIVGLPNVGKSTLFNAVTKTQKAQAANYPFCTIDPNVGVVTVPDPRLQALSNLSHSKKIV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A G G+G++FL H + ++ +V E+ Sbjct: 65 PAAIEFV--DIAGLVKGASAGEGLGNQFLSHIREVNAIVQVVRCFED 109 >gi|329946048|ref|ZP_08293707.1| GTP-binding protein YchF [Actinomyces sp. oral taxon 170 str. F0386] gi|328528025|gb|EGF55009.1| GTP-binding protein YchF [Actinomyces sp. oral taxon 170 str. F0386] Length = 361 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------ 209 IGI+GLPN GKST ++TRA A+YPF T+ PN+G+V + E Sbjct: 5 IGIVGLPNVGKSTLFNALTRATVLAANYPFATIEPNVGVVPLPDARLDKLAELFHSARVV 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI++ A +G G+G++FL + + + A E+ Sbjct: 65 PATVSFVDIAGIVRGASEGEGLGNQFLANIREADAICMVTRAFED 109 >gi|163739065|ref|ZP_02146478.1| hypothetical protein RGBS107_09506 [Phaeobacter gallaeciensis BS107] gi|163741693|ref|ZP_02149083.1| translation-associated GTPase [Phaeobacter gallaeciensis 2.10] gi|161384866|gb|EDQ09245.1| translation-associated GTPase [Phaeobacter gallaeciensis 2.10] gi|161387870|gb|EDQ12226.1| hypothetical protein RGBS107_09506 [Phaeobacter gallaeciensis BS107] Length = 365 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G V G K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTKTASAQAANFPFCTIEPNVGEVGVPDARLDKLAAIAGSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A QG G+G++FL + T + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASQGEGLGNQFLANIRETDAIAHVLRCFED 110 >gi|149925757|ref|ZP_01914021.1| hypothetical protein LMED105_06017 [Limnobacter sp. MED105] gi|149825874|gb|EDM85082.1| hypothetical protein LMED105_06017 [Limnobacter sp. MED105] Length = 363 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGMVEVPDARLQQLADVVKPERILP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL H T ++++V E++ Sbjct: 66 ATVEFV--DIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDD 110 >gi|22299130|ref|NP_682377.1| translation-associated GTPase [Thermosynechococcus elongatus BP-1] gi|22295312|dbj|BAC09139.1| tll1587 [Thermosynechococcus elongatus BP-1] Length = 363 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 GI+GLPN GKST F A V AK + A++PF T+ PN+G+V + +LA Sbjct: 5 GIVGLPNVGKSTLFNALVANAKAEAANFPFCTIEPNVGVVAVPDERLEVLAKISQSAQIV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + ++H+V E++ Sbjct: 65 PTRIEFVDIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDD 110 >gi|306835742|ref|ZP_07468746.1| GTP-binding protein YchF [Corynebacterium accolens ATCC 49726] gi|304568373|gb|EFM43934.1| GTP-binding protein YchF [Corynebacterium accolens ATCC 49726] Length = 361 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 +GI+GLPN GKST ++TR++ A+YPF T+ PN+G+V K E IL Sbjct: 5 LGIVGLPNVGKSTLFNALTRSEILAANYPFATIEPNVGLVELPDPRLDTLAKMFNSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+ A QG G+G+ FL + + +V A ++ Sbjct: 65 PATVSFVDIAGIVAGASQGEGMGNAFLANIREADAICQVVRAFSDD 110 >gi|262041843|ref|ZP_06015028.1| GTP-dependent nucleic acid-binding protein EngD [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040835|gb|EEW41921.1| GTP-dependent nucleic acid-binding protein EngD [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 363 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQCILDE-L 262 DI G++K A +G G+G++FL + T + H+V E + + A + +E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVNPEEDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 DVINTEL-------ALSDLDTCE 141 >gi|332667989|ref|YP_004450777.1| GTP-binding protein YchF [Haliscomenobacter hydrossis DSM 1100] gi|332336803|gb|AEE53904.1| GTP-binding protein YchF [Haliscomenobacter hydrossis DSM 1100] Length = 365 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T AK A+YPF T PN+G++ + E I Sbjct: 6 GIVGLPNVGKSTLFNALTNAKALAANYPFATKEPNIGMITVPDRRMDKLVELIGPRSVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA-LEENV 251 + DI G+IK A +G G+G++FL + ++H+V +++NV Sbjct: 66 TNIEIVDIAGLIKGASKGEGLGNQFLGNIREVDAIIHVVRCFVDDNV 112 >gi|56417317|ref|YP_154391.1| translation-associated GTPase [Anaplasma marginale str. St. Maries] gi|222475679|ref|YP_002564096.1| GTP-binding protein YchF, putative [Anaplasma marginale str. Florida] gi|254995482|ref|ZP_05277672.1| GTP-dependent nucleic acid-binding protein EngD [Anaplasma marginale str. Mississippi] gi|255003673|ref|ZP_05278637.1| GTP-dependent nucleic acid-binding protein EngD [Anaplasma marginale str. Puerto Rico] gi|255004797|ref|ZP_05279598.1| GTP-dependent nucleic acid-binding protein EngD [Anaplasma marginale str. Virginia] gi|56388549|gb|AAV87136.1| hypothetical protein AM1355 [Anaplasma marginale str. St. Maries] gi|222419817|gb|ACM49840.1| GTP-binding protein YchF, putative [Anaplasma marginale str. Florida] Length = 364 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 19/117 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLG--IVKEG------------- 204 + GI+GLPN GKST ++T+ ++A+YPF T+ PN G +V++ Sbjct: 4 NCGIVGLPNVGKSTLFNALTKTMAAEMANYPFCTIEPNKGMSVVRDARLKTLASIAGSQN 63 Query: 205 --YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-NVQAAYQCI 258 + + DI G++K A G G+G++FL H ++H++ E+ +V +Q + Sbjct: 64 VVFSQVEFVDIAGLVKGASSGEGLGNKFLGHIREVDAIMHVLRCFEDGDVSHVHQVV 120 >gi|328542806|ref|YP_004302915.1| GTPase, translation factor [polymorphum gilvum SL003B-26A1] gi|326412552|gb|ADZ69615.1| Predicted GTPase, probable translation factor [Polymorphum gilvum SL003B-26A1] Length = 366 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++TR A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTRTAAAQAANYPFCTIEPNTGEVAVPDPRLGEIARIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRITFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDD 111 >gi|269959176|ref|YP_003328965.1| translation-associated GTPase YchF [Anaplasma centrale str. Israel] gi|269849007|gb|ACZ49651.1| translation-associated GTPase YchF [Anaplasma centrale str. Israel] Length = 364 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 19/117 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLG--IVKEG------------- 204 + GI+GLPN GKST ++T+ ++A+YPF T+ PN G +V++ Sbjct: 4 NCGIVGLPNVGKSTLFNALTKTMAAEMANYPFCTIEPNKGMSVVRDARLKTLASIAGSQN 63 Query: 205 --YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-NVQAAYQCI 258 + + DI G++K A G G+G++FL H ++H++ E+ +V +Q + Sbjct: 64 VVFSQVEFVDIAGLVKGASSGEGLGNKFLGHIREVDAIMHVLRCFEDGDVSHVHQVV 120 >gi|325578760|ref|ZP_08148807.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus parainfluenzae ATCC 33392] gi|325159584|gb|EGC71716.1| GTP-dependent nucleic acid-binding protein EngD [Haemophilus parainfluenzae ATCC 33392] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS-- 263 DI G++ A +G G+G++FL + T + H+V E + +D LS Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLSDI 125 Query: 264 -AYNSEL 269 N+EL Sbjct: 126 ETINTEL 132 >gi|186477456|ref|YP_001858926.1| GTP-dependent nucleic acid-binding protein EngD [Burkholderia phymatum STM815] gi|184193915|gb|ACC71880.1| GTP-binding protein YchF [Burkholderia phymatum STM815] Length = 364 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLKALSEIVKPERIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 66 AVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENV 112 >gi|237745352|ref|ZP_04575833.1| GTP-binding protein [Fusobacterium sp. 7_1] gi|229432581|gb|EEO42793.1| GTP-binding protein [Fusobacterium sp. 7_1] Length = 364 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------------------ 202 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V Sbjct: 4 IGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNIGMVTVPDERLNELSKIVNPQKI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + T + +V E++ Sbjct: 64 VPATVEFV--DIAGLVKGASKGEGLGNKFLSNIRSTSAICQVVRCFEDD 110 >gi|88861337|ref|ZP_01135967.1| GTP-dependent nucleic acid-binding protein engD [Pseudoalteromonas tunicata D2] gi|88816603|gb|EAR26428.1| GTP-dependent nucleic acid-binding protein engD [Pseudoalteromonas tunicata D2] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTNAGIEAANFPFCTIEPNTGVVAVPDPRLKQLAEIVNPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++K A +G G+G++FL + T + H+V E EN+ I D++ Sbjct: 66 TSMEFVDIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFEDENIIHVAGTIDPADDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 DTINTEL 132 >gi|329296257|ref|ZP_08253593.1| GTP-binding protein YchF [Plautia stali symbiont] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDQLSEIVKPQRVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|330802205|ref|XP_003289110.1| hypothetical protein DICPUDRAFT_88350 [Dictyostelium purpureum] gi|325080837|gb|EGC34376.1| hypothetical protein DICPUDRAFT_88350 [Dictyostelium purpureum] Length = 421 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IG +G P+AGKS+FL + T ++ K+ +YPFTT+ PN G+ Sbjct: 7 IGCVGKPSAGKSSFLNAATDSQAKVGNYPFTTIEPNYGVTYYPTECPCKKYDKIDACSPR 66 Query: 203 -------EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 Y + D+ G++ A +G G+G++FL HVLLH+V Sbjct: 67 YGRCDKGTRYIPVKMLDVAGLVPGASEGKGLGNQFLDDLRHAHVLLHVV 115 >gi|301155944|emb|CBW15414.1| predicted GTP-binding protein [Haemophilus parainfluenzae T3T1] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS-- 263 DI G++ A +G G+G++FL + T + H+V E + +D LS Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLSDI 125 Query: 264 -AYNSEL 269 N+EL Sbjct: 126 ETINTEL 132 >gi|260910664|ref|ZP_05917323.1| GTP-dependent nucleic acid-binding protein EngD [Prevotella sp. oral taxon 472 str. F0295] gi|260635174|gb|EEX53205.1| GTP-dependent nucleic acid-binding protein EngD [Prevotella sp. oral taxon 472 str. F0295] Length = 366 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIEPNVGVITVPDERLTRLAEIVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 + DI G++K A +G G+G++FL + T ++H++ +EN+ Sbjct: 66 ATCEIVDIAGLVKGASKGEGLGNKFLGNIRETDAVIHVLRCFDDENI 112 >gi|258648872|ref|ZP_05736341.1| GTP-binding protein YchF [Prevotella tannerae ATCC 51259] gi|260850895|gb|EEX70764.1| GTP-binding protein YchF [Prevotella tannerae ATCC 51259] Length = 367 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNVGVITVPDERLNRLAELVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T ++H++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNQFLGNIRETDAIIHVLRCFDDD 110 >gi|317491745|ref|ZP_07950180.1| GTP-binding protein YchF [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920179|gb|EFV41503.1| GTP-binding protein YchF [Enterobacteriaceae bacterium 9_2_54FAA] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---EL 262 DI G++K A +G G+G++FL + T + H+V E + +D ++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPAEDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 DVINTEL-------ALSDLDTCE 141 >gi|268608600|ref|ZP_06142327.1| GTP-binding protein YchF [Ruminococcus flavefaciens FD-1] Length = 364 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 21/107 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 +G++GLPN GKST ++T A + A+YPF T+ N+GIV E Y+ Sbjct: 3 LGMVGLPNVGKSTLFNALTNAGAESANYPFCTIEKNVGIVSVPDERLDKLAEMYEPDKFT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL ++H+V E+ Sbjct: 63 PATLEFV--DIAGLVKGASKGEGLGNKFLADIREVDAIVHVVRCFED 107 >gi|227501582|ref|ZP_03931631.1| GTP-binding protein [Corynebacterium accolens ATCC 49725] gi|227077607|gb|EEI15570.1| GTP-binding protein [Corynebacterium accolens ATCC 49725] Length = 361 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 +GI+GLPN GKST ++TR++ A+YPF T+ PN+G+V K E IL Sbjct: 5 LGIVGLPNVGKSTLFNALTRSEILAANYPFATIEPNVGLVELPDPRLDTLAKMFNSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+ A QG G+G+ FL + + +V A ++ Sbjct: 65 PATVSFVDIAGIVAGASQGEGMGNAFLANIREADAICQVVRAFSDD 110 >gi|71895183|ref|NP_001026425.1| obg-like ATPase 1 [Gallus gallus] gi|75571439|sp|Q5ZM25|OLA1_CHICK RecName: Full=Obg-like ATPase 1 gi|53127778|emb|CAG31218.1| hypothetical protein RCJMB04_3f20 [Gallus gallus] Length = 396 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 22/145 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T+++ ++PF T+ PN V F Sbjct: 25 IGIVGLPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDDRFDFLCQYHKPPSKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILD 260 + DI G++K AH G G+G+ FL H + H++ A E++ V+ + + D Sbjct: 85 PAFLNVVDIAGLVKGAHTGQGLGNSFLSHINACDGIFHLMRAFEDDDITHVEGSVDPVRD 144 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVD 285 + + ELR K E + ID ++ Sbjct: 145 -IEIIHEELRLKDEELITQSIDKLE 168 >gi|299065553|emb|CBJ36724.1| GTP-dependent nucleic acid-binding protein engD [Ralstonia solanacearum CMR15] Length = 364 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDQRLSALADIVKPERVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 66 AVVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENV 112 >gi|258621059|ref|ZP_05716093.1| GTP-dependent nucleic acid-binding protein engD [Vibrio mimicus VM573] gi|258586447|gb|EEW11162.1| GTP-dependent nucleic acid-binding protein engD [Vibrio mimicus VM573] Length = 383 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 27/151 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 26 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAEIVKPERILP 85 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E EN+ A L+++ Sbjct: 86 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGKVSPLEDI 145 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 N EL L+ +D+ + L + K Sbjct: 146 EVINLEL-------ALADLDSCERAILRQSK 169 >gi|255324407|ref|ZP_05365524.1| GTP-binding protein YchF [Corynebacterium tuberculostearicum SK141] gi|311740739|ref|ZP_07714566.1| GTP-binding protein YchF [Corynebacterium pseudogenitalium ATCC 33035] gi|255298313|gb|EET77613.1| GTP-binding protein YchF [Corynebacterium tuberculostearicum SK141] gi|311304259|gb|EFQ80335.1| GTP-binding protein YchF [Corynebacterium pseudogenitalium ATCC 33035] Length = 361 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY-KEFIL 210 +GI+GLPN GKST ++TR++ A+YPF T+ PN+G+V+ E + E IL Sbjct: 5 LGIVGLPNVGKSTLFNALTRSEILAANYPFATIEPNVGLVELPDSRLTQLAEMFNSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+ A QG G+G+ FL + + +V A ++ Sbjct: 65 PATVSFVDIAGIVSGASQGEGMGNAFLANIREADAICQVVRAFSDD 110 >gi|288928752|ref|ZP_06422598.1| GTP-binding protein YchF [Prevotella sp. oral taxon 317 str. F0108] gi|288329736|gb|EFC68321.1| GTP-binding protein YchF [Prevotella sp. oral taxon 317 str. F0108] Length = 366 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIEPNVGVITVPDERLTRLAEIVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 + DI G++K A +G G+G++FL + T ++H++ +EN+ Sbjct: 66 ATCEIVDIAGLVKGASKGEGLGNKFLGNIRETDAVIHVLRCFDDENI 112 >gi|268679369|ref|YP_003303800.1| GTP-binding protein YchF [Sulfurospirillum deleyianum DSM 6946] gi|268617400|gb|ACZ11765.1| GTP-binding protein YchF [Sulfurospirillum deleyianum DSM 6946] Length = 366 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 21/129 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-----------------KE 203 +GI+GLPN GKST ++T+A+ + A+YPF T+ PN IV + Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAESANYPFCTIEPNKAIVPVPDARLDELAKIVNPERI 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 + DI G++K A G G+G++FL + V+LH+V E EN+ I L Sbjct: 65 QHSTVDFVDIAGLVKGASSGEGLGNQFLSNIREVEVILHMVRCFEDENITHVENSINPLR 124 Query: 261 ELSAYNSEL 269 ++ SEL Sbjct: 125 DIEIIESEL 133 >gi|229819601|ref|YP_002881127.1| GTP-binding protein YchF [Beutenbergia cavernae DSM 12333] gi|229565514|gb|ACQ79365.1| GTP-binding protein YchF [Beutenbergia cavernae DSM 12333] Length = 361 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI+GLPN GKST ++TRA+ A+YPF T+ PN+G+V G + + Sbjct: 5 IGIVGLPNVGKSTLFNALTRAQVLAANYPFATIEPNVGVVPLPDPRLDTLAGIFGSERIV 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI GI+K A +G G+G++FL + + + A + Sbjct: 65 PATVSFVDIAGIVKGASEGEGLGNQFLANIREADAICMVTRAFAD 109 >gi|168019233|ref|XP_001762149.1| predicted protein [Physcomitrella patens subsp. patens] gi|162686553|gb|EDQ72941.1| predicted protein [Physcomitrella patens subsp. patens] Length = 370 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 GI+GLPN GKST F A V K + A++PF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNALVENGKAQAANFPFCTIEPNVGVVAVPDPRLGVLSQLSKSQKTV 65 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A QG G+G++FL H ++ +V E++ Sbjct: 66 PTSVEFVDIAGLVKGASQGEGLGNKFLSHIREVDCIVQVVRCFEDD 111 >gi|146300222|ref|YP_001194813.1| translation-associated GTPase [Flavobacterium johnsoniae UW101] gi|146154640|gb|ABQ05494.1| GTP-binding protein YchF [Flavobacterium johnsoniae UW101] Length = 364 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G+V +E + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNIGVVNVPDPRINKLEELVKPERVQM 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + + ++H++ + + Sbjct: 64 ATVDIVDIAGLVKGASKGEGLGNQFLGNIRECNAIIHVLRCFDND 108 >gi|308186577|ref|YP_003930708.1| GTP-binding protein 9 [Pantoea vagans C9-1] gi|308057087|gb|ADO09259.1| Putative GTP-binding protein 9 [Pantoea vagans C9-1] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDQLSEIVKPQRVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|238763009|ref|ZP_04623976.1| GTP-dependent nucleic acid-binding protein engD [Yersinia kristensenii ATCC 33638] gi|238698767|gb|EEP91517.1| GTP-dependent nucleic acid-binding protein engD [Yersinia kristensenii ATCC 33638] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++K A +G G+G++FL + T + H+V E + + A + +D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVDPVDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS ++T + Sbjct: 126 DTINTEL-------ALSDLETCE 141 >gi|224823795|ref|ZP_03696904.1| GTP-binding protein YchF [Lutiella nitroferrum 2002] gi|224604250|gb|EEG10424.1| GTP-binding protein YchF [Lutiella nitroferrum 2002] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVEVPDPRLAELAKIINPQKIQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|172036051|ref|YP_001802552.1| GTP-dependent nucleic acid-binding protein EngD [Cyanothece sp. ATCC 51142] gi|171697505|gb|ACB50486.1| GTP-dependent translation factor [Cyanothece sp. ATCC 51142] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 GI+GLPN GKST F A V AK A++PF T+ PN+G+V + +LA Sbjct: 5 GIVGLPNVGKSTLFNALVANAKADAANFPFCTIEPNVGVVSVPDERLGVLAELSQSEKIV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A QG G+G++FL + ++H+V +++ Sbjct: 65 PTRIEFVDIAGLVKGASQGEGLGNQFLANIREVDAIVHVVRCFDDD 110 >gi|324997182|ref|ZP_08118294.1| GTP-binding protein YchF [Pseudonocardia sp. P1] Length = 357 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------ 209 +GI+GLPN GKST ++TR A+YPF T+ PN+G+V + E Sbjct: 5 LGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGVVPLPDPRLDKLAEIFASDKIL 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI+K A +GAG+G++FL + + + +V ++ Sbjct: 65 PATVSFVDIAGIVKGASEGAGLGNKFLANIRESDAICQVVRVFDD 109 >gi|304397550|ref|ZP_07379427.1| GTP-binding protein YchF [Pantoea sp. aB] gi|304354722|gb|EFM19092.1| GTP-binding protein YchF [Pantoea sp. aB] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDQLSEIVKPQRVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|254456502|ref|ZP_05069931.1| GTP-binding protein YchF [Candidatus Pelagibacter sp. HTCC7211] gi|207083504|gb|EDZ60930.1| GTP-binding protein YchF [Candidatus Pelagibacter sp. HTCC7211] Length = 357 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 18/104 (17%) Query: 163 GIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVKEGYKEF------------- 208 GI+GLPN GKST ++T + K + A++PF T+ PN+GIV K Sbjct: 6 GIVGLPNVGKSTLFNALTNSSKAQAANFPFCTIDPNIGIVAVPDKRLENLSKVSKSKKVI 65 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 DI G++K A +G G+G++FL H ++H++ + Sbjct: 66 NTTISFVDIAGLVKGASKGEGLGNKFLSHIREVDAIIHMIRCFD 109 >gi|315634933|ref|ZP_07890215.1| GTP-dependent nucleic acid-binding protein EngD [Aggregatibacter segnis ATCC 33393] gi|315476485|gb|EFU67235.1| GTP-dependent nucleic acid-binding protein EngD [Aggregatibacter segnis ATCC 33393] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS-- 263 DI G++ A +G G+G++FL + T + H+V E + +D LS Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLSDI 125 Query: 264 -AYNSEL 269 N+EL Sbjct: 126 ETINTEL 132 >gi|281211280|gb|EFA85445.1| Hypothetical 45.2 kDa GTP-binding protein [Polysphondylium pallidum PN500] Length = 420 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------- 201 IG +G P+AGKS+FL + T + K+ +YPFTT+ PN G+ Sbjct: 7 IGCVGKPSAGKSSFLNAATDSNAKVGNYPFTTIEPNYGVTYYPAECPCLKYEKTALCKPR 66 Query: 202 ----KEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 ++G Y + D+ G++ A +G G+G++FL HVLLH+V Sbjct: 67 YGRCQDGTRYIPVKMLDVAGLVPGASEGKGLGNQFLDDLRHAHVLLHVV 115 >gi|311743717|ref|ZP_07717523.1| GTP-binding protein YchF [Aeromicrobium marinum DSM 15272] gi|311312847|gb|EFQ82758.1| GTP-binding protein YchF [Aeromicrobium marinum DSM 15272] Length = 362 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 21/101 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA---------- 211 IGI+GLPNAGKST ++T+ A+YPF T+ PN+G+V G + LA Sbjct: 5 IGIVGLPNAGKSTLFNALTKNDVLAANYPFATIEPNVGVV--GVPDSRLAALAEIFGSEK 62 Query: 212 ---------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHI 243 DI GI++ A +G G+G++FL H + + + Sbjct: 63 ILPATVQFVDIAGIVRGASEGEGMGNKFLSHIRESDAICQV 103 >gi|271500550|ref|YP_003333575.1| GTP-binding protein YchF [Dickeya dadantii Ech586] gi|270344105|gb|ACZ76870.1| GTP-binding protein YchF [Dickeya dadantii Ech586] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDQLAEIVKPQRTIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 DI G++K A +G G+G++FL + T + H+V E EN+ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENENI 112 >gi|255326928|ref|ZP_05368004.1| GTP-binding protein YchF [Rothia mucilaginosa ATCC 25296] gi|283457640|ref|YP_003362224.1| putative GTPase, putative translation factor [Rothia mucilaginosa DY-18] gi|255296145|gb|EET75486.1| GTP-binding protein YchF [Rothia mucilaginosa ATCC 25296] gi|283133639|dbj|BAI64404.1| predicted GTPase, probable translation factor [Rothia mucilaginosa DY-18] Length = 361 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY-KEFIL 210 IGI+GLPN GKST ++T A+YPF T+ PN+G+V E + E IL Sbjct: 5 IGIVGLPNVGKSTLFNALTGNTVLAANYPFATIDPNVGVVNLPDARLNRLAEIFGSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI+K A +G G+G++FL + H + +V A ++ Sbjct: 65 PATVSFVDIAGIVKGASEGEGLGNKFLANIREAHAIAQVVRAFDD 109 >gi|126658802|ref|ZP_01729946.1| translation-associated GTPase [Cyanothece sp. CCY0110] gi|126619900|gb|EAZ90625.1| translation-associated GTPase [Cyanothece sp. CCY0110] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST F A V AK A++PF T+ PN+G+V Sbjct: 5 GIVGLPNVGKSTLFNALVANAKADAANFPFCTIEPNVGVVSVPDERLTVLAELSQSDKVV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QG G+G++FL + ++H+V +++ Sbjct: 65 PTRMEFV--DIAGLVKGASQGEGLGNQFLANIREVDAIVHVVRCFDDD 110 >gi|238792542|ref|ZP_04636175.1| GTP-dependent nucleic acid-binding protein engD [Yersinia intermedia ATCC 29909] gi|238728177|gb|EEQ19698.1| GTP-dependent nucleic acid-binding protein engD [Yersinia intermedia ATCC 29909] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++K A +G G+G++FL + T + H+V E + + A + +D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVDPVDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS ++T + Sbjct: 126 DTINTEL-------ALSDLETCE 141 >gi|293395765|ref|ZP_06640047.1| GTP-dependent nucleic acid-binding protein EngD [Serratia odorifera DSM 4582] gi|291421702|gb|EFE94949.1| GTP-dependent nucleic acid-binding protein EngD [Serratia odorifera DSM 4582] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---EL 262 DI G++K A +G G+G++FL + T + H+V E + +D ++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPAEDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 DVINTEL-------ALSDLDTCE 141 >gi|238751553|ref|ZP_04613044.1| GTP-dependent nucleic acid-binding protein engD [Yersinia rohdei ATCC 43380] gi|238710271|gb|EEQ02498.1| GTP-dependent nucleic acid-binding protein engD [Yersinia rohdei ATCC 43380] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++K A +G G+G++FL + T + H+V E + + A + +D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVDPVDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS ++T + Sbjct: 126 DTINTEL-------ALSDLETCE 141 >gi|221195363|ref|ZP_03568418.1| GTP-binding protein YchF [Atopobium rimae ATCC 49626] gi|221184550|gb|EEE16942.1| GTP-binding protein YchF [Atopobium rimae ATCC 49626] Length = 354 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 21/102 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++TR A+YPF T+ PN+GIV Sbjct: 5 IGIVGLPNVGKSTLFTALTRKGGLAANYPFATIDPNVGIVDVPDARLQKLADIVHPGRIV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 EF+ DI G++K A++G G+G++FL + +T + +V Sbjct: 65 PATVEFV--DIAGLVKGANEGEGLGNQFLANIRQTDAICEVV 104 >gi|300702906|ref|YP_003744507.1| GTP-dependent nucleic acid-binding protein EngD [Ralstonia solanacearum CFBP2957] gi|299070568|emb|CBJ41863.1| GTP-dependent nucleic acid-binding protein engD [Ralstonia solanacearum CFBP2957] Length = 364 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDLRLSALADIVKPERVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 66 AVVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENV 112 >gi|149203837|ref|ZP_01880806.1| translation-associated GTPase [Roseovarius sp. TM1035] gi|149142954|gb|EDM30996.1| translation-associated GTPase [Roseovarius sp. TM1035] Length = 365 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++TR A + A++PF T+ PN+G V G K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLDKLAQIAGSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + T + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFED 110 >gi|317482269|ref|ZP_07941290.1| GTP-binding protein YchF [Bifidobacterium sp. 12_1_47BFAA] gi|322688909|ref|YP_004208643.1| GTPase [Bifidobacterium longum subsp. infantis 157F] gi|291517046|emb|CBK70662.1| GTP-binding protein YchF [Bifidobacterium longum subsp. longum F8] gi|316916285|gb|EFV37686.1| GTP-binding protein YchF [Bifidobacterium sp. 12_1_47BFAA] gi|320460245|dbj|BAJ70865.1| GTPase [Bifidobacterium longum subsp. infantis 157F] Length = 364 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI+GLPN GKST ++TR +YPF T+ PN GIV K Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDDRLPVLAKLVNTEKIV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A E++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDD 110 >gi|187734952|ref|YP_001877064.1| GTP-binding protein YchF [Akkermansia muciniphila ATCC BAA-835] gi|187425004|gb|ACD04283.1| GTP-binding protein YchF [Akkermansia muciniphila ATCC BAA-835] Length = 373 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST +VTR K + A+YPF T+ PN+G+V G ++ I Sbjct: 5 GIVGLPNVGKSTLFNAVTRTRKAQAANYPFCTIDPNVGMVTVPDPRLQVLSDMSGSEKII 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +GAG+G++FL + ++ +V + + Sbjct: 65 PTLIEFVDIAGLVKGASEGAGLGNQFLANIREVDAIVQVVRCFDND 110 >gi|123442675|ref|YP_001006652.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089636|emb|CAL12486.1| conserved hypothetical protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++K A +G G+G++FL + T + H+V E + + A + +D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVDPVDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS ++T + Sbjct: 126 DTINTEL-------ALSDLETCE 141 >gi|83747496|ref|ZP_00944534.1| GTP-binding protein, probable translation factor [Ralstonia solanacearum UW551] gi|207721779|ref|YP_002252217.1| gtp-binding protein [Ralstonia solanacearum MolK2] gi|207744455|ref|YP_002260847.1| gtp-binding protein [Ralstonia solanacearum IPO1609] gi|83725810|gb|EAP72950.1| GTP-binding protein, probable translation factor [Ralstonia solanacearum UW551] gi|206586943|emb|CAQ17527.1| gtp-binding protein [Ralstonia solanacearum MolK2] gi|206595861|emb|CAQ62788.1| gtp-binding protein [Ralstonia solanacearum IPO1609] Length = 364 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDLRLSALADIVRPERVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 66 AVVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENV 112 >gi|238788562|ref|ZP_04632355.1| GTP-dependent nucleic acid-binding protein engD [Yersinia frederiksenii ATCC 33641] gi|238723475|gb|EEQ15122.1| GTP-dependent nucleic acid-binding protein engD [Yersinia frederiksenii ATCC 33641] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++K A +G G+G++FL + T + H+V E + + A + +D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVDPVDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS ++T + Sbjct: 126 DTINTEL-------ALSDLETCE 141 >gi|312132939|ref|YP_004000278.1| gtpase [Bifidobacterium longum subsp. longum BBMN68] gi|311773919|gb|ADQ03407.1| Putative GTPase [Bifidobacterium longum subsp. longum BBMN68] Length = 364 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI+GLPN GKST ++TR +YPF T+ PN GIV K Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDDRLPVLAKLVNTEKIV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A E++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDD 110 >gi|197294429|ref|YP_001798970.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus Phytoplasma australiense] gi|171853756|emb|CAM11682.1| Putative GTPase, probable translation factor [Candidatus Phytoplasma australiense] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 21/107 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGIIGLPN GKST ++T+ + A+YPF T+ PN+G V+ Sbjct: 3 IGIIGLPNVGKSTLFNALTKMQVLEANYPFATIEPNVGTVEVPDPRLKKLSQIFQSQKII 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF DI G++ A +G G+G++FL H + H+V E+ Sbjct: 63 SALIEF--KDIAGLVAGASKGEGLGNQFLSHIRNVDAICHVVKCFED 107 >gi|15606048|ref|NP_213425.1| translation-associated GTPase [Aquifex aeolicus VF5] gi|2983235|gb|AAC06832.1| hypothetical protein aq_609 [Aquifex aeolicus VF5] Length = 370 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKST ++T+ K + A+YPF T+ PN+G+V+ Sbjct: 5 LGIVGLPNVGKSTLFNALTKTMKAQAANYPFCTIEPNVGVVEVPDERLYKLAEIEKSQKI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 + EF+ DI G++K A +G G+G++FL H + ++ A E EN+ Sbjct: 65 TPTFIEFV--DIAGLVKGASKGEGLGNQFLSHIREVDAVAMVLRAFEDENI 113 >gi|332524126|ref|ZP_08400356.1| GTP-binding protein YchF [Rubrivivax benzoatilyticus JA2] gi|332107465|gb|EGJ08689.1| GTP-binding protein YchF [Rubrivivax benzoatilyticus JA2] Length = 364 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVELPDPRLVKLSEIVKPERVVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++ A +G G+G++FL H T ++++V +ENV Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFDDENV 112 >gi|56477780|ref|YP_159369.1| GTP-dependent nucleic acid-binding protein EngD [Aromatoleum aromaticum EbN1] gi|56313823|emb|CAI08468.1| predicted GTPase, probably involved in regulation of ribosome function [Aromatoleum aromaticum EbN1] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 32/158 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VKE 203 GI+GLPN GKST ++T++ +YPF T+ PN+GI V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKSGIAAENYPFCTIEPNVGIVEVPDPRLDALSTIVKPQKVQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LD 260 EF+ DI G++ A +G G+G++FL + T ++H+V +ENV + + Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVHVVRCFADENVVHVSGSVDPIR 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT 298 ++ ++EL L+ + TVD LAR K A Sbjct: 124 DIEVIDTEL-------ALADMATVDK-ALARYKRPAAA 153 >gi|332158793|ref|YP_004424072.1| translation-associated GTPase [Pyrococcus sp. NA2] gi|331034256|gb|AEC52068.1| translation-associated GTPase [Pyrococcus sp. NA2] Length = 397 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 24/110 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG----IVKEGYKEF-------- 208 +IG++G PN GKSTF ++ T +IA+YPFTT+ N+G I + KE Sbjct: 2 EIGVVGKPNVGKSTFFSAATLVDVEIANYPFTTIDANVGVTYVITEHPCKELGCRPNPQN 61 Query: 209 ------------ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 + D+ G++ AH+G G+G++FL + VL+H+V A Sbjct: 62 YEYRDGLALIPVKMIDVAGLVPGAHEGRGLGNKFLDNLRMASVLIHVVDA 111 >gi|320538908|ref|ZP_08038584.1| putative GTP-binding protein [Serratia symbiotica str. Tucson] gi|320031068|gb|EFW13071.1| putative GTP-binding protein [Serratia symbiotica str. Tucson] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---EL 262 DI G++K A +G G+G++FL + T + H+V E + +D ++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPAEDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 EVINTEL-------ALSDLDTCE 141 >gi|226329836|ref|ZP_03805354.1| hypothetical protein PROPEN_03748 [Proteus penneri ATCC 35198] gi|225200631|gb|EEG82985.1| hypothetical protein PROPEN_03748 [Proteus penneri ATCC 35198] Length = 155 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++K A +G G+G++FL + T + H+V E + + A + +++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVDPAEDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 ETINTEL-------ALSDLDTCE 141 >gi|227545984|ref|ZP_03976033.1| GTP-binding protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227213618|gb|EEI81467.1| GTP-binding protein [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 378 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI+GLPN GKST ++TR +YPF T+ PN GIV K Sbjct: 19 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDDRLPVLAKLVNTEKIV 78 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A E++ Sbjct: 79 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDD 124 >gi|224122356|ref|XP_002330603.1| predicted protein [Populus trichocarpa] gi|222872161|gb|EEF09292.1| predicted protein [Populus trichocarpa] Length = 394 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 21/136 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IGI+GLPN GKST ++T+ ++PF T+ PN + I E ++ Sbjct: 27 IGIVGLPNVGKSTLFNTLTKLSIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSEV 86 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 + DI G+++ AHQG G+G+ FL H + H++ A E+ I+D + Sbjct: 87 SAFLEIHDIAGLVRGAHQGQGLGNSFLSHIRAVDGIFHVLRAFEDPDIIHVDDIVDPVRD 146 Query: 262 LSAYNSELR-KKIEIV 276 L ++ELR K IE + Sbjct: 147 LEVISAELRLKDIEFI 162 >gi|59800527|ref|YP_207239.1| translation-associated GTPase [Neisseria gonorrhoeae FA 1090] gi|194097672|ref|YP_002000712.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria gonorrhoeae NCCP11945] gi|239998194|ref|ZP_04718118.1| translation-associated GTPase [Neisseria gonorrhoeae 35/02] gi|240013377|ref|ZP_04720290.1| translation-associated GTPase [Neisseria gonorrhoeae DGI18] gi|240015820|ref|ZP_04722360.1| translation-associated GTPase [Neisseria gonorrhoeae FA6140] gi|240079956|ref|ZP_04724499.1| translation-associated GTPase [Neisseria gonorrhoeae FA19] gi|240112166|ref|ZP_04726656.1| translation-associated GTPase [Neisseria gonorrhoeae MS11] gi|240114912|ref|ZP_04728974.1| translation-associated GTPase [Neisseria gonorrhoeae PID18] gi|240117196|ref|ZP_04731258.1| translation-associated GTPase [Neisseria gonorrhoeae PID1] gi|240120449|ref|ZP_04733411.1| translation-associated GTPase [Neisseria gonorrhoeae PID24-1] gi|240122749|ref|ZP_04735705.1| translation-associated GTPase [Neisseria gonorrhoeae PID332] gi|240124942|ref|ZP_04737828.1| translation-associated GTPase [Neisseria gonorrhoeae SK-92-679] gi|254492971|ref|ZP_05106142.1| translation-associated GTPase [Neisseria gonorrhoeae 1291] gi|260441273|ref|ZP_05795089.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria gonorrhoeae DGI2] gi|268594048|ref|ZP_06128215.1| translation-associated GTPase [Neisseria gonorrhoeae 35/02] gi|268596097|ref|ZP_06130264.1| translation-associated GTPase [Neisseria gonorrhoeae FA19] gi|268598223|ref|ZP_06132390.1| translation-associated GTPase [Neisseria gonorrhoeae MS11] gi|268600569|ref|ZP_06134736.1| translation-associated GTPase [Neisseria gonorrhoeae PID18] gi|268602887|ref|ZP_06137054.1| translation-associated GTPase [Neisseria gonorrhoeae PID1] gi|268681351|ref|ZP_06148213.1| translation-associated GTPase [Neisseria gonorrhoeae PID332] gi|268683521|ref|ZP_06150383.1| translation-associated GTPase [Neisseria gonorrhoeae SK-92-679] gi|291044621|ref|ZP_06570330.1| translation-associated GTPase [Neisseria gonorrhoeae DGI2] gi|293397740|ref|ZP_06641946.1| GTP-binding protein YchF [Neisseria gonorrhoeae F62] gi|59717422|gb|AAW88827.1| putative GTP-binding protein [Neisseria gonorrhoeae FA 1090] gi|193932962|gb|ACF28786.1| putative GTP-binding protein [Neisseria gonorrhoeae NCCP11945] gi|226512011|gb|EEH61356.1| translation-associated GTPase [Neisseria gonorrhoeae 1291] gi|268547437|gb|EEZ42855.1| translation-associated GTPase [Neisseria gonorrhoeae 35/02] gi|268549885|gb|EEZ44904.1| translation-associated GTPase [Neisseria gonorrhoeae FA19] gi|268582354|gb|EEZ47030.1| translation-associated GTPase [Neisseria gonorrhoeae MS11] gi|268584700|gb|EEZ49376.1| translation-associated GTPase [Neisseria gonorrhoeae PID18] gi|268587018|gb|EEZ51694.1| translation-associated GTPase [Neisseria gonorrhoeae PID1] gi|268621635|gb|EEZ54035.1| translation-associated GTPase [Neisseria gonorrhoeae PID332] gi|268623805|gb|EEZ56205.1| translation-associated GTPase [Neisseria gonorrhoeae SK-92-679] gi|291011515|gb|EFE03511.1| translation-associated GTPase [Neisseria gonorrhoeae DGI2] gi|291611686|gb|EFF40755.1| GTP-binding protein YchF [Neisseria gonorrhoeae F62] gi|317163482|gb|ADV07023.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria gonorrhoeae TCDC-NG08107] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G+RFL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNRFLANIRETDAIVNVVRCFDDD 110 >gi|33152132|ref|NP_873485.1| translation-associated GTPase [Haemophilus ducreyi 35000HP] gi|47605652|sp|Q7VMI2|ENGD_HAEDU RecName: Full=GTP-dependent nucleic acid-binding protein engD gi|33148354|gb|AAP95874.1| putative GTP-binding protein [Haemophilus ducreyi 35000HP] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVNPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A + D++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPADDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 ETINTEL 132 >gi|17547617|ref|NP_521019.1| translation-associated GTPase [Ralstonia solanacearum GMI1000] gi|17429921|emb|CAD16605.1| putative gtp-binding protein [Ralstonia solanacearum GMI1000] Length = 364 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDQRLSALADIVKPERVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 66 AVVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENV 112 >gi|237749586|ref|ZP_04580066.1| GTP-dependent nucleic acid-binding protein EngD [Oxalobacter formigenes OXCC13] gi|229380948|gb|EEO31039.1| GTP-dependent nucleic acid-binding protein EngD [Oxalobacter formigenes OXCC13] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 34/153 (22%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGIVEVPDNRLNDLASIVKPERILP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 EF+ DI G++ A +G G+G++FL H T ++ +V + + +D LS Sbjct: 66 AVVEFV--DIAGLVAGASKGEGLGNQFLAHIRETDAIVQVVRCFQNDNVVHVAGKVDPLS 123 Query: 264 AYNSELRKKIEIV----GLSQIDTVDSDTLARK 292 IE++ L+ ++TV+ T+AR+ Sbjct: 124 --------DIEVIQTELALADLNTVER-TIARE 147 >gi|297568497|ref|YP_003689841.1| GTP-binding protein YchF [Desulfurivibrio alkaliphilus AHT2] gi|296924412|gb|ADH85222.1| GTP-binding protein YchF [Desulfurivibrio alkaliphilus AHT2] Length = 364 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T A + A+YPF T+ PN+G+V Sbjct: 6 GIVGLPNVGKSTIFNALTAAGIESANYPFCTIEPNVGMVPVPDERLDQLATMAKTRNKVN 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A QG G+G++FL H + + H++ ++ Sbjct: 66 ARMEFV--DIAGLVSGASQGEGLGNQFLGHIRQVDAIAHVIRCFADD 110 >gi|19552253|ref|NP_600255.1| GTP-dependent nucleic acid-binding protein EngD [Corynebacterium glutamicum ATCC 13032] gi|62389918|ref|YP_225320.1| GTP-dependent nucleic acid-binding protein EngD [Corynebacterium glutamicum ATCC 13032] gi|21323799|dbj|BAB98425.1| Predicted GTPase [Corynebacterium glutamicum ATCC 13032] gi|41325254|emb|CAF19734.1| Predicted GTPase [Corynebacterium glutamicum ATCC 13032] Length = 361 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------ 209 +GI+GLPN GKST ++TR A+YPF T+ PN+G+V+ E E Sbjct: 5 LGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGLVELPDARLERLSEIFGSERIL 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI+K A +G G+G+ FL + + +V A +ENV Sbjct: 65 PATVSFVDIAGIVKGASEGEGMGNAFLANIREADAICQVVRAFADENV 112 >gi|15602028|ref|NP_245100.1| translation-associated GTPase [Pasteurella multocida subsp. multocida str. Pm70] gi|47605741|sp|Q9CP90|ENGD_PASMU RecName: Full=GTP-dependent nucleic acid-binding protein engD gi|12720382|gb|AAK02247.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E + V A Q +++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGQINPAEDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 DTINTEL 132 >gi|322513908|ref|ZP_08066985.1| GTP-dependent nucleic acid-binding protein EngD [Actinobacillus ureae ATCC 25976] gi|322120243|gb|EFX92196.1| GTP-dependent nucleic acid-binding protein EngD [Actinobacillus ureae ATCC 25976] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEND 110 >gi|260914452|ref|ZP_05920921.1| GTP-dependent nucleic acid-binding protein EngD [Pasteurella dagmatis ATCC 43325] gi|260631553|gb|EEX49735.1| GTP-dependent nucleic acid-binding protein EngD [Pasteurella dagmatis ATCC 43325] Length = 363 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEND 110 >gi|88606802|ref|YP_505800.1| translation-associated GTPase [Anaplasma phagocytophilum HZ] gi|88597865|gb|ABD43335.1| GTP-binding protein YchF [Anaplasma phagocytophilum HZ] Length = 363 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 19/111 (17%) Query: 161 DIGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLG--IVKEG------------- 204 + GI+GLPN GKST ++T+ ++A+YPF T+ PN G IV++ Sbjct: 4 NCGIVGLPNVGKSTLFNALTQTTLAEVANYPFCTIEPNAGRTIVRDARLKTLASMAGSQN 63 Query: 205 --YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQ 252 + + DI G+++ A G G+G++FL H ++H++ E E++Q Sbjct: 64 TIFSQVEFVDIAGLVRGASAGEGLGNKFLGHIREVDAIMHVLRCFEDEDIQ 114 >gi|58584419|ref|YP_197992.1| translation-associated GTPase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418735|gb|AAW70750.1| Predicted GTPase, probable translation factor [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 367 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 18/108 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKST ++T++ + A+YPF T+ PN+G V K Sbjct: 7 NCGIVGLPNIGKSTLFNALTQSSAAEAANYPFCTIEPNIGKVPIRDQRLRQIAAIAGSEK 66 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y + + DI G++K A +G G+G++FL H ++H++ ++ Sbjct: 67 VIYNQLEVVDIAGLVKGASKGEGLGNKFLSHIREVDAIVHLLRCFMDD 114 >gi|117924131|ref|YP_864748.1| GTP-binding protein YchF [Magnetococcus sp. MC-1] gi|117607887|gb|ABK43342.1| GTP-binding protein YchF [Magnetococcus sp. MC-1] Length = 369 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T A + A+YPF T+ PN+G+V Sbjct: 6 GIVGLPNVGKSTTFNALTAAGAESANYPFCTIEPNVGVVVVPDPRLDALSAIVNPQRVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL H + ++H+V E++ Sbjct: 66 TTMEFL--DIAGLVAGASKGEGLGNQFLGHIRQVDAIVHLVRCFEDD 110 >gi|183598956|ref|ZP_02960449.1| hypothetical protein PROSTU_02398 [Providencia stuartii ATCC 25827] gi|188021170|gb|EDU59210.1| hypothetical protein PROSTU_02398 [Providencia stuartii ATCC 25827] Length = 363 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++K A +G G+G++FL + T + H+V E + + A Q +++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGQVNPAEDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL L+ +DT + Sbjct: 126 EVINTEL-------ALADLDTCE 141 >gi|254362623|ref|ZP_04978712.1| possible GTP-binding protein [Mannheimia haemolytica PHL213] gi|261491679|ref|ZP_05988261.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494202|ref|ZP_05990702.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|153094237|gb|EDN75108.1| possible GTP-binding protein [Mannheimia haemolytica PHL213] gi|261310105|gb|EEY11308.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312694|gb|EEY13815.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 363 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEND 110 >gi|53729107|ref|ZP_00134068.2| COG0012: Predicted GTPase, probable translation factor [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207522|ref|YP_001052747.1| GTP-dependent nucleic acid-binding protein EngD [Actinobacillus pleuropneumoniae L20] gi|165975492|ref|YP_001651085.1| GTP-dependent nucleic acid-binding protein EngD [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149303|ref|YP_001967828.1| GTP-dependent nucleic acid-binding protein EngD [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250513|ref|ZP_07336710.1| translation-associated GTPase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303251857|ref|ZP_07338028.1| translation-associated GTPase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|126096314|gb|ABN73142.1| GTP-dependent nucleic acid-binding protein EngD [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165875593|gb|ABY68641.1| GTP-dependent nucleic acid-binding protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189914434|gb|ACE60686.1| GTP-dependent nucleic acid-binding protein EngD [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302649287|gb|EFL79472.1| translation-associated GTPase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650501|gb|EFL80660.1| translation-associated GTPase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 363 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEND 110 >gi|91070029|gb|ABE10955.1| putative GTP-binding protein [uncultured Prochlorococcus marinus clone ASNC3046] Length = 363 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--------------- 206 GIIGLPN GKST F A V AK + A++PF T+ PN GIV + Sbjct: 5 GIIGLPNVGKSTLFNALVENAKAQAANFPFCTIEPNKGIVSVPDQRLQELGNLSSSQNII 64 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V E++ Sbjct: 65 PTKIEFV--DIAGLVKGASKGEGLGNKFLSNIREVDAIVHVVRCFEDS 110 >gi|258654485|ref|YP_003203641.1| GTP-dependent nucleic acid-binding protein EngD [Nakamurella multipartita DSM 44233] gi|258557710|gb|ACV80652.1| GTP-binding protein YchF [Nakamurella multipartita DSM 44233] Length = 359 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 20/128 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++T+A A+YPF T+ PN+G+V K Sbjct: 5 LGIVGLPNVGKSTVFNALTKANVLAANYPFATIEPNIGVVPIPDPRLDRLAEVFGSAKTV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS- 263 DI GI+K A +GAG+G++FL + + +V ++ +D LS Sbjct: 65 PAVVSFVDIAGIVKGASEGAGLGNKFLANIREADAICQVVRVFADDDVVHVDGRVDPLSD 124 Query: 264 --AYNSEL 269 N+EL Sbjct: 125 IETINTEL 132 >gi|242793565|ref|XP_002482190.1| GTP binding protein (Gtp1), putative [Talaromyces stipitatus ATCC 10500] gi|218718778|gb|EED18198.1| GTP binding protein (Gtp1), putative [Talaromyces stipitatus ATCC 10500] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKSTFL+ +T+ + ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 60 ARVALVGFPSVGKSTFLSKITKTRSEVAAYSFTTLTAIPGVLEYGGAEIQILDLPGIIEG 119 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 120 AAEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA 154 >gi|221057586|ref|XP_002261301.1| GTP-binding protein [Plasmodium knowlesi strain H] gi|194247306|emb|CAQ40706.1| GTP-binding protein, putative [Plasmodium knowlesi strain H] Length = 367 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 53/93 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I +IG P+ GKST L+ +T +IADY FTTL GI+ + L D+PGII+ Sbjct: 62 ARICLIGFPSVGKSTLLSKITSTTSEIADYEFTTLTCKPGIISYKDSKIQLLDLPGIIQG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A +G G G + + + +++ I+ A +N Q Sbjct: 122 ASEGRGRGRQVIAVAKSCDMIMMILDATRDNSQ 154 >gi|195132219|ref|XP_002010541.1| GI15984 [Drosophila mojavensis] gi|193908991|gb|EDW07858.1| GI15984 [Drosophila mojavensis] Length = 397 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 36/180 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IGI+G+PN GKSTF +T++ ++PF T+ PN + + E + + Sbjct: 24 IGIVGVPNVGKSTFFNVLTQSAAPAENFPFCTIKPNESRVPVPDERFDYLVDYHKPASVV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G++K A +G G+G+ FL H + H+ A E+ +V+ + D Sbjct: 84 PAYLNVVDIAGLVKGAAEGQGLGNDFLSHISACDAIFHLCRAFEDPDVTHVEGEVDPVRD 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDS--------------DTLARKKNELATQCGQVPFE 306 LS ELR K E L +D ++ D++ + K+ L Q Q+ FE Sbjct: 144 -LSIIAEELRLKDEEKLLQNLDKLEKVVARGGDKKLKPEYDSMLKIKDILVDQKRQLRFE 202 >gi|296169978|ref|ZP_06851585.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895382|gb|EFG75088.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 357 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 +GI+GLPN GKST ++TR A+YPF T+ PN G+V G + + Sbjct: 5 LGIVGLPNVGKSTLFNALTRNDVVAANYPFATIEPNEGVVPLPDPRLDKLAELFGSERIV 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI G++K A +GAG+G++FL H + +V ++ Sbjct: 65 PAPVTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFSDD 110 >gi|283778763|ref|YP_003369518.1| GTP-binding protein YchF [Pirellula staleyi DSM 6068] gi|283437216|gb|ADB15658.1| GTP-binding protein YchF [Pirellula staleyi DSM 6068] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 18/107 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVKEG------------YKE 207 + GI+GLPN GKST ++T + + A+YPF T+ PN GIV K+ Sbjct: 2 EAGIVGLPNVGKSTLFNAITSSGAAQAANYPFCTIEPNEGIVSVPDDRLRRISALIVPKK 61 Query: 208 FI-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + L DI GI+K A +G G+G++FL H + +L +V E+ Sbjct: 62 LVPAVLKLVDIAGIVKGASEGEGLGNKFLSHIRQVDAILQVVRCFED 108 >gi|149920494|ref|ZP_01908962.1| translation-associated GTPase [Plesiocystis pacifica SIR-1] gi|149818675|gb|EDM78120.1| translation-associated GTPase [Plesiocystis pacifica SIR-1] Length = 366 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 24/130 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--------------- 206 +GI+GLPN GKST +++ A + A+Y F T+ PN GIV K Sbjct: 5 VGIVGLPNVGKSTLFNALSNAGAEAANYAFCTIEPNHGIVPVPDKRLDELVRVIEPKSTV 64 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA-LEENVQAAYQCI--L 259 EF+ DI G++ A +G G+G++FL H + H+V +++N+Q + L Sbjct: 65 QTTVEFV--DIAGLVAGASKGEGLGNQFLAHIRSVDAIAHVVRCFVDDNIQHVANKVDPL 122 Query: 260 DELSAYNSEL 269 D++ ++EL Sbjct: 123 DDIETIDTEL 132 >gi|145253601|ref|XP_001398313.1| GTP-binding protein RBG1 [Aspergillus niger CBS 513.88] gi|134083881|emb|CAK43012.1| unnamed protein product [Aspergillus niger] Length = 367 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 57/95 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKSTFL+ +T+ K + A Y FTTL G+++ G E + D+PGII+ Sbjct: 64 ARVALVGFPSVGKSTFLSKITKTKSETAAYAFTTLTAIPGVLEYGGAEIQILDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 124 ASEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA 158 >gi|323977226|gb|EGB72313.1| GTP-binding protein YchF [Escherichia coli TW10509] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|284928700|ref|YP_003421222.1| GTP-binding protein YchF [cyanobacterium UCYN-A] gi|284809159|gb|ADB94864.1| GTP-binding protein YchF [cyanobacterium UCYN-A] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK---EGYK------------ 206 GI+GLPN GKST F A V AK A++PF T+ PN+G+V E K Sbjct: 5 GIVGLPNVGKSTLFNALVANAKADAANFPFCTIEPNVGLVSVPDERLKVLAELSKSEKIL 64 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QG G+G++FL + ++H+V +++ Sbjct: 65 PTRVEFV--DIAGLVKGAAQGEGLGNKFLANIREVDAIVHVVRCFDDD 110 >gi|221124266|ref|XP_002159725.1| PREDICTED: similar to Temporarily Assigned Gene name family member (tag-210) [Hydra magnipapillata] gi|260220077|emb|CBA27255.1| GTP-dependent nucleic acid-binding protein engD [Curvibacter putative symbiont of Hydra magnipapillata] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLQQLADIITPERIVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A G G+G++FL H T +++V E++ Sbjct: 66 AIVEFV--DIAGLVAGASTGEGLGNKFLAHIRETDATINVVRCFEDD 110 >gi|187930207|ref|YP_001900694.1| GTP-dependent nucleic acid-binding protein EngD [Ralstonia pickettii 12J] gi|187727097|gb|ACD28262.1| GTP-binding protein YchF [Ralstonia pickettii 12J] Length = 364 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLQALADIVKPERVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 66 AVVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENV 112 >gi|222149342|ref|YP_002550299.1| GTP-dependent nucleic acid-binding protein EngD [Agrobacterium vitis S4] gi|221736326|gb|ACM37289.1| GTP-binding protein [Agrobacterium vitis S4] Length = 367 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++TR A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTRTAAAQAANYPFCTIEPNTGEVAVPDPRMQTLATVAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAVVHVLRCFEDD 111 >gi|152970790|ref|YP_001335899.1| GTP-dependent nucleic acid-binding protein EngD [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895304|ref|YP_002920039.1| GTP-dependent nucleic acid-binding protein EngD [Klebsiella pneumoniae NTUH-K2044] gi|330009878|ref|ZP_08306633.1| GTP-binding protein YchF [Klebsiella sp. MS 92-3] gi|150955639|gb|ABR77669.1| putative GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238547621|dbj|BAH63972.1| putative GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328534673|gb|EGF61239.1| GTP-binding protein YchF [Klebsiella sp. MS 92-3] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|26247526|ref|NP_753566.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli CFT073] gi|91210424|ref|YP_540410.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli UTI89] gi|110641433|ref|YP_669163.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli 536] gi|117623421|ref|YP_852334.1| translation-associated GTPase [Escherichia coli APEC O1] gi|191171076|ref|ZP_03032627.1| GTP-binding protein EngD [Escherichia coli F11] gi|215486435|ref|YP_002328866.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli O127:H6 str. E2348/69] gi|218558132|ref|YP_002391045.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli S88] gi|218689150|ref|YP_002397362.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli ED1a] gi|227886375|ref|ZP_04004180.1| GTP-binding protein [Escherichia coli 83972] gi|237705165|ref|ZP_04535646.1| translation-associated GTPase [Escherichia sp. 3_2_53FAA] gi|300971928|ref|ZP_07171716.1| GTP-binding protein YchF [Escherichia coli MS 45-1] gi|300996002|ref|ZP_07181336.1| GTP-binding protein YchF [Escherichia coli MS 200-1] gi|301046852|ref|ZP_07193969.1| GTP-binding protein YchF [Escherichia coli MS 185-1] gi|306813899|ref|ZP_07448072.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli NC101] gi|312966443|ref|ZP_07780665.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli 2362-75] gi|331646521|ref|ZP_08347624.1| GTP-binding protein YchF [Escherichia coli M605] gi|331657254|ref|ZP_08358216.1| GTP-binding protein YchF [Escherichia coli TA206] gi|26107927|gb|AAN80126.1|AE016759_400 Probable GTP-binding protein ychF [Escherichia coli CFT073] gi|91071998|gb|ABE06879.1| probable GTP-binding protein YchF [Escherichia coli UTI89] gi|110343025|gb|ABG69262.1| putative GTP-binding protein [Escherichia coli 536] gi|115512545|gb|ABJ00620.1| putative GTP-binding protein YchF [Escherichia coli APEC O1] gi|190908808|gb|EDV68396.1| GTP-binding protein EngD [Escherichia coli F11] gi|215264507|emb|CAS08874.1| predicted GTP-binding protein [Escherichia coli O127:H6 str. E2348/69] gi|218364901|emb|CAR02597.1| putative GTP-binding protein [Escherichia coli S88] gi|218426714|emb|CAR07551.1| putative GTP-binding protein [Escherichia coli ED1a] gi|222033002|emb|CAP75742.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli LF82] gi|226899922|gb|EEH86181.1| translation-associated GTPase [Escherichia sp. 3_2_53FAA] gi|227836579|gb|EEJ47045.1| GTP-binding protein [Escherichia coli 83972] gi|281178389|dbj|BAI54719.1| putative GTP-binding protein [Escherichia coli SE15] gi|294491991|gb|ADE90747.1| GTP-binding protein EngD [Escherichia coli IHE3034] gi|300301220|gb|EFJ57605.1| GTP-binding protein YchF [Escherichia coli MS 185-1] gi|300304609|gb|EFJ59129.1| GTP-binding protein YchF [Escherichia coli MS 200-1] gi|300411053|gb|EFJ94591.1| GTP-binding protein YchF [Escherichia coli MS 45-1] gi|305852536|gb|EFM52984.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli NC101] gi|307553258|gb|ADN46033.1| GTP-binding protein EngD [Escherichia coli ABU 83972] gi|307627274|gb|ADN71578.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli UM146] gi|312288896|gb|EFR16794.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli 2362-75] gi|312945833|gb|ADR26660.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli O83:H1 str. NRG 857C] gi|315288576|gb|EFU47974.1| GTP-binding protein YchF [Escherichia coli MS 110-3] gi|315290781|gb|EFU50153.1| GTP-binding protein YchF [Escherichia coli MS 153-1] gi|315297337|gb|EFU56617.1| GTP-binding protein YchF [Escherichia coli MS 16-3] gi|320195787|gb|EFW70412.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli WV_060327] gi|323949680|gb|EGB45566.1| GTP-binding protein YchF [Escherichia coli H252] gi|323953942|gb|EGB49741.1| GTP-binding protein YchF [Escherichia coli H263] gi|324006008|gb|EGB75227.1| GTP-binding protein YchF [Escherichia coli MS 57-2] gi|324015647|gb|EGB84866.1| GTP-binding protein YchF [Escherichia coli MS 60-1] gi|330911070|gb|EGH39580.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli AA86] gi|331045273|gb|EGI17400.1| GTP-binding protein YchF [Escherichia coli M605] gi|331055502|gb|EGI27511.1| GTP-binding protein YchF [Escherichia coli TA206] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|331682692|ref|ZP_08383311.1| GTP-binding protein YchF [Escherichia coli H299] gi|331080323|gb|EGI51502.1| GTP-binding protein YchF [Escherichia coli H299] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|212535618|ref|XP_002147965.1| GTP binding protein (Gtp1), putative [Penicillium marneffei ATCC 18224] gi|210070364|gb|EEA24454.1| GTP binding protein (Gtp1), putative [Penicillium marneffei ATCC 18224] Length = 368 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKSTFL+ +T+ + ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 65 ARVALVGFPSVGKSTFLSKITKTRSEVAAYSFTTLTAIPGVLEYGGAEIQILDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 125 AAEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA 159 >gi|88810859|ref|ZP_01126116.1| GTP-binding protein, HSR1-related [Nitrococcus mobilis Nb-231] gi|88792489|gb|EAR23599.1| GTP-binding protein, HSR1-related [Nitrococcus mobilis Nb-231] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 21/108 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++TR + +YPF T+ P++G V Sbjct: 4 NCGIVGLPNVGKSTLFNALTRNQVAAENYPFCTIDPHVGTVPVPDPRLAQLAEIVQPQKI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G+RFL H T + H+V E+ Sbjct: 64 VPTVMEFV--DIAGLVAGASKGEGLGNRFLAHIRETDAVAHVVRCFED 109 >gi|311279345|ref|YP_003941576.1| GTP-binding protein YchF [Enterobacter cloacae SCF1] gi|308748540|gb|ADO48292.1| GTP-binding protein YchF [Enterobacter cloacae SCF1] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|300921831|ref|ZP_07137988.1| GTP-binding protein YchF [Escherichia coli MS 182-1] gi|300421757|gb|EFK05068.1| GTP-binding protein YchF [Escherichia coli MS 182-1] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|300906890|ref|ZP_07124564.1| GTP-binding protein YchF [Escherichia coli MS 84-1] gi|301305573|ref|ZP_07211664.1| GTP-binding protein YchF [Escherichia coli MS 124-1] gi|300401323|gb|EFJ84861.1| GTP-binding protein YchF [Escherichia coli MS 84-1] gi|300839162|gb|EFK66922.1| GTP-binding protein YchF [Escherichia coli MS 124-1] gi|315254838|gb|EFU34806.1| GTP-binding protein YchF [Escherichia coli MS 85-1] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|15830962|ref|NP_309735.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli O157:H7 str. Sakai] gi|16129166|ref|NP_415721.1| predicted GTP-binding protein [Escherichia coli str. K-12 substr. MG1655] gi|24112602|ref|NP_707112.1| GTP-dependent nucleic acid-binding protein EngD [Shigella flexneri 2a str. 301] gi|30062727|ref|NP_836898.1| GTP-dependent nucleic acid-binding protein EngD [Shigella flexneri 2a str. 2457T] gi|82544343|ref|YP_408290.1| GTP-dependent nucleic acid-binding protein EngD [Shigella boydii Sb227] gi|82776543|ref|YP_402892.1| GTP-dependent nucleic acid-binding protein EngD [Shigella dysenteriae Sd197] gi|89108048|ref|AP_001828.1| predicted GTP-binding protein [Escherichia coli str. K-12 substr. W3110] gi|110805208|ref|YP_688728.1| GTP-dependent nucleic acid-binding protein EngD [Shigella flexneri 5 str. 8401] gi|157157840|ref|YP_001462455.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli E24377A] gi|157160708|ref|YP_001458026.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli HS] gi|168750762|ref|ZP_02775784.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4113] gi|168756564|ref|ZP_02781571.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4401] gi|168764411|ref|ZP_02789418.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4501] gi|168771090|ref|ZP_02796097.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4486] gi|168777787|ref|ZP_02802794.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4196] gi|168782557|ref|ZP_02807564.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4076] gi|168787705|ref|ZP_02812712.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC869] gi|168802105|ref|ZP_02827112.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC508] gi|170020430|ref|YP_001725384.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli ATCC 8739] gi|170080831|ref|YP_001730151.1| GTP-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|170680985|ref|YP_001743991.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli SMS-3-5] gi|187730029|ref|YP_001879986.1| GTP-dependent nucleic acid-binding protein EngD [Shigella boydii CDC 3083-94] gi|191168519|ref|ZP_03030305.1| GTP-binding protein EngD [Escherichia coli B7A] gi|193066743|ref|ZP_03047768.1| GTP-binding protein EngD [Escherichia coli E22] gi|193071184|ref|ZP_03052107.1| GTP-binding protein EngD [Escherichia coli E110019] gi|194425815|ref|ZP_03058371.1| GTP-binding protein EngD [Escherichia coli B171] gi|194434920|ref|ZP_03067165.1| GTP-binding protein EngD [Shigella dysenteriae 1012] gi|194436983|ref|ZP_03069082.1| GTP-binding protein EngD [Escherichia coli 101-1] gi|195938852|ref|ZP_03084234.1| translation-associated GTPase [Escherichia coli O157:H7 str. EC4024] gi|208806944|ref|ZP_03249281.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4206] gi|208816418|ref|ZP_03257597.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4045] gi|208822259|ref|ZP_03262578.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4042] gi|209398838|ref|YP_002270137.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4115] gi|209918444|ref|YP_002292528.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli SE11] gi|217328294|ref|ZP_03444376.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. TW14588] gi|218553757|ref|YP_002386670.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli IAI1] gi|218694717|ref|YP_002402384.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli 55989] gi|218699910|ref|YP_002407539.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli IAI39] gi|218704725|ref|YP_002412244.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli UMN026] gi|238900434|ref|YP_002926230.1| putative GTP-binding protein [Escherichia coli BW2952] gi|254792673|ref|YP_003077510.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli O157:H7 str. TW14359] gi|256018547|ref|ZP_05432412.1| GTP-dependent nucleic acid-binding protein EngD [Shigella sp. D9] gi|256023120|ref|ZP_05436985.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia sp. 4_1_40B] gi|260843495|ref|YP_003221273.1| putative GTP-binding protein [Escherichia coli O103:H2 str. 12009] gi|260854864|ref|YP_003228755.1| putative GTP-binding protein [Escherichia coli O26:H11 str. 11368] gi|260867608|ref|YP_003234010.1| putative GTP-binding protein [Escherichia coli O111:H- str. 11128] gi|261224935|ref|ZP_05939216.1| predicted GTP-binding protein [Escherichia coli O157:H7 str. FRIK2000] gi|261257208|ref|ZP_05949741.1| putative GTP-binding protein [Escherichia coli O157:H7 str. FRIK966] gi|291282228|ref|YP_003499046.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli O55:H7 str. CB9615] gi|293404746|ref|ZP_06648738.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli FVEC1412] gi|293409590|ref|ZP_06653166.1| GTP-binding protein YchF [Escherichia coli B354] gi|293414480|ref|ZP_06657129.1| GTP-binding protein YchF [Escherichia coli B185] gi|293433519|ref|ZP_06661947.1| GTP-binding protein YchF [Escherichia coli B088] gi|298380389|ref|ZP_06989988.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli FVEC1302] gi|300816894|ref|ZP_07097114.1| GTP-binding protein YchF [Escherichia coli MS 107-1] gi|300821027|ref|ZP_07101176.1| GTP-binding protein YchF [Escherichia coli MS 119-7] gi|300896590|ref|ZP_07115110.1| GTP-binding protein YchF [Escherichia coli MS 198-1] gi|300920400|ref|ZP_07136835.1| GTP-binding protein YchF [Escherichia coli MS 115-1] gi|300928251|ref|ZP_07143788.1| GTP-binding protein YchF [Escherichia coli MS 187-1] gi|300939561|ref|ZP_07154218.1| GTP-binding protein YchF [Escherichia coli MS 21-1] gi|300951670|ref|ZP_07165494.1| GTP-binding protein YchF [Escherichia coli MS 116-1] gi|300955602|ref|ZP_07167960.1| GTP-binding protein YchF [Escherichia coli MS 175-1] gi|301017235|ref|ZP_07182016.1| GTP-binding protein YchF [Escherichia coli MS 69-1] gi|301029495|ref|ZP_07192576.1| GTP-binding protein YchF [Escherichia coli MS 196-1] gi|301648144|ref|ZP_07247897.1| GTP-binding protein YchF [Escherichia coli MS 146-1] gi|307137817|ref|ZP_07497173.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli H736] gi|307310042|ref|ZP_07589692.1| GTP-binding protein YchF [Escherichia coli W] gi|309789169|ref|ZP_07683762.1| GTP-dependent nucleic acid-binding protein engD [Shigella dysenteriae 1617] gi|309794293|ref|ZP_07688717.1| GTP-binding protein YchF [Escherichia coli MS 145-7] gi|312971390|ref|ZP_07785565.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli 1827-70] gi|331641732|ref|ZP_08342867.1| GTP-binding protein YchF [Escherichia coli H736] gi|331662606|ref|ZP_08363529.1| GTP-binding protein YchF [Escherichia coli TA143] gi|331667587|ref|ZP_08368451.1| GTP-binding protein YchF [Escherichia coli TA271] gi|331672738|ref|ZP_08373524.1| GTP-binding protein YchF [Escherichia coli TA280] gi|331676983|ref|ZP_08377679.1| GTP-binding protein YchF [Escherichia coli H591] gi|332279607|ref|ZP_08392020.1| translation-associated GTPase [Shigella sp. D9] gi|78100083|sp|P0ABU3|ENGD_ECO57 RecName: Full=GTP-dependent nucleic acid-binding protein engD gi|78100086|sp|P0ABU2|ENGD_ECOLI RecName: Full=GTP-dependent nucleic acid-binding protein engD gi|78100115|sp|P0ABU4|ENGD_SHIFL RecName: Full=GTP-dependent nucleic acid-binding protein engD gi|1787454|gb|AAC74287.1| predicted GTP-binding protein [Escherichia coli str. K-12 substr. MG1655] gi|4062787|dbj|BAA36061.1| predicted GTP-binding protein [Escherichia coli str. K12 substr. W3110] gi|13361173|dbj|BAB35131.1| putative GTP-binding protein [Escherichia coli O157:H7 str. Sakai] gi|24051506|gb|AAN42819.1| putative GTP-binding protein [Shigella flexneri 2a str. 301] gi|30040975|gb|AAP16705.1| putative GTP-binding protein [Shigella flexneri 2a str. 2457T] gi|81240691|gb|ABB61401.1| putative GTP-binding protein [Shigella dysenteriae Sd197] gi|81245754|gb|ABB66462.1| putative GTP-binding protein [Shigella boydii Sb227] gi|110614756|gb|ABF03423.1| putative GTP-binding protein [Shigella flexneri 5 str. 8401] gi|157066388|gb|ABV05643.1| GTP-binding protein EngD [Escherichia coli HS] gi|157079870|gb|ABV19578.1| GTP-binding protein EngD [Escherichia coli E24377A] gi|169755358|gb|ACA78057.1| GTP-binding protein YchF [Escherichia coli ATCC 8739] gi|169888666|gb|ACB02373.1| predicted GTP-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|170518703|gb|ACB16881.1| GTP-binding protein EngD [Escherichia coli SMS-3-5] gi|187427021|gb|ACD06295.1| GTP-binding protein EngD [Shigella boydii CDC 3083-94] gi|187767045|gb|EDU30889.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4196] gi|188015094|gb|EDU53216.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4113] gi|189000062|gb|EDU69048.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4076] gi|189356358|gb|EDU74777.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4401] gi|189360083|gb|EDU78502.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4486] gi|189365599|gb|EDU84015.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4501] gi|189372434|gb|EDU90850.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC869] gi|189375870|gb|EDU94286.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC508] gi|190901417|gb|EDV61180.1| GTP-binding protein EngD [Escherichia coli B7A] gi|192925613|gb|EDV80282.1| GTP-binding protein EngD [Escherichia coli E22] gi|192955516|gb|EDV85996.1| GTP-binding protein EngD [Escherichia coli E110019] gi|194415870|gb|EDX32136.1| GTP-binding protein EngD [Escherichia coli B171] gi|194416853|gb|EDX32977.1| GTP-binding protein EngD [Shigella dysenteriae 1012] gi|194423966|gb|EDX39954.1| GTP-binding protein EngD [Escherichia coli 101-1] gi|208726745|gb|EDZ76346.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4206] gi|208733066|gb|EDZ81754.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4045] gi|208737744|gb|EDZ85427.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4042] gi|209160238|gb|ACI37671.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. EC4115] gi|209772608|gb|ACI84616.1| putative GTP-binding protein [Escherichia coli] gi|209772610|gb|ACI84617.1| putative GTP-binding protein [Escherichia coli] gi|209772612|gb|ACI84618.1| putative GTP-binding protein [Escherichia coli] gi|209772614|gb|ACI84619.1| putative GTP-binding protein [Escherichia coli] gi|209772616|gb|ACI84620.1| putative GTP-binding protein [Escherichia coli] gi|209911703|dbj|BAG76777.1| putative GTP-binding protein [Escherichia coli SE11] gi|217318721|gb|EEC27147.1| GTP-binding protein EngD [Escherichia coli O157:H7 str. TW14588] gi|218351449|emb|CAU97157.1| putative GTP-binding protein [Escherichia coli 55989] gi|218360525|emb|CAQ98083.1| putative GTP-binding protein [Escherichia coli IAI1] gi|218369896|emb|CAR17671.1| putative GTP-binding protein [Escherichia coli IAI39] gi|218431822|emb|CAR12707.1| putative GTP-binding protein [Escherichia coli UMN026] gi|238862451|gb|ACR64449.1| predicted GTP-binding protein [Escherichia coli BW2952] gi|254592073|gb|ACT71434.1| predicted GTP-binding protein [Escherichia coli O157:H7 str. TW14359] gi|257753513|dbj|BAI25015.1| predicted GTP-binding protein [Escherichia coli O26:H11 str. 11368] gi|257758642|dbj|BAI30139.1| predicted GTP-binding protein [Escherichia coli O103:H2 str. 12009] gi|257763964|dbj|BAI35459.1| predicted GTP-binding protein [Escherichia coli O111:H- str. 11128] gi|260449662|gb|ACX40084.1| GTP-binding protein YchF [Escherichia coli DH1] gi|281600627|gb|ADA73611.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri 2002017] gi|284921015|emb|CBG34080.1| GTP-dependent nucleic acid-binding protein [Escherichia coli 042] gi|290762101|gb|ADD56062.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli O55:H7 str. CB9615] gi|291324338|gb|EFE63760.1| GTP-binding protein YchF [Escherichia coli B088] gi|291426954|gb|EFE99980.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli FVEC1412] gi|291434538|gb|EFF07511.1| GTP-binding protein YchF [Escherichia coli B185] gi|291470058|gb|EFF12542.1| GTP-binding protein YchF [Escherichia coli B354] gi|298277831|gb|EFI19345.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli FVEC1302] gi|299877603|gb|EFI85814.1| GTP-binding protein YchF [Escherichia coli MS 196-1] gi|300317531|gb|EFJ67315.1| GTP-binding protein YchF [Escherichia coli MS 175-1] gi|300359570|gb|EFJ75440.1| GTP-binding protein YchF [Escherichia coli MS 198-1] gi|300400366|gb|EFJ83904.1| GTP-binding protein YchF [Escherichia coli MS 69-1] gi|300412616|gb|EFJ95926.1| GTP-binding protein YchF [Escherichia coli MS 115-1] gi|300449116|gb|EFK12736.1| GTP-binding protein YchF [Escherichia coli MS 116-1] gi|300455565|gb|EFK19058.1| GTP-binding protein YchF [Escherichia coli MS 21-1] gi|300463720|gb|EFK27213.1| GTP-binding protein YchF [Escherichia coli MS 187-1] gi|300526326|gb|EFK47395.1| GTP-binding protein YchF [Escherichia coli MS 119-7] gi|300530668|gb|EFK51730.1| GTP-binding protein YchF [Escherichia coli MS 107-1] gi|301073730|gb|EFK88536.1| GTP-binding protein YchF [Escherichia coli MS 146-1] gi|306909760|gb|EFN40254.1| GTP-binding protein YchF [Escherichia coli W] gi|308122198|gb|EFO59460.1| GTP-binding protein YchF [Escherichia coli MS 145-7] gi|308922923|gb|EFP68437.1| GTP-dependent nucleic acid-binding protein engD [Shigella dysenteriae 1617] gi|309701502|emb|CBJ00809.1| GTP-dependent nucleic acid-binding protein [Escherichia coli ETEC H10407] gi|310335987|gb|EFQ01187.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli 1827-70] gi|313649392|gb|EFS13823.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri 2a str. 2457T] gi|315060454|gb|ADT74781.1| predicted GTP-binding protein [Escherichia coli W] gi|315135839|dbj|BAJ42998.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli DH1] gi|315615955|gb|EFU96581.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli 3431] gi|320174893|gb|EFW50012.1| GTP-binding and nucleic acid-binding protein YchF [Shigella dysenteriae CDC 74-1112] gi|320181790|gb|EFW56700.1| GTP-binding and nucleic acid-binding protein YchF [Shigella boydii ATCC 9905] gi|320185606|gb|EFW60368.1| GTP-binding and nucleic acid-binding protein YchF [Shigella flexneri CDC 796-83] gi|320187995|gb|EFW62662.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli O157:H7 str. EC1212] gi|320199242|gb|EFW73833.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli EC4100B] gi|320637355|gb|EFX07162.1| GTP-binding protein YchF [Escherichia coli O157:H7 str. G5101] gi|320643217|gb|EFX12418.1| GTP-binding protein YchF [Escherichia coli O157:H- str. 493-89] gi|320648154|gb|EFX16830.1| GTP-binding protein YchF [Escherichia coli O157:H- str. H 2687] gi|320653988|gb|EFX22062.1| GTP-binding protein YchF [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659467|gb|EFX27036.1| GTP-binding protein YchF [Escherichia coli O55:H7 str. USDA 5905] gi|320664604|gb|EFX31755.1| GTP-binding protein YchF [Escherichia coli O157:H7 str. LSU-61] gi|323153199|gb|EFZ39461.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli EPECa14] gi|323162272|gb|EFZ48130.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli E128010] gi|323172444|gb|EFZ58081.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli LT-68] gi|323179282|gb|EFZ64852.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli 1180] gi|323185635|gb|EFZ70996.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli 1357] gi|323187433|gb|EFZ72742.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli RN587/1] gi|323378982|gb|ADX51250.1| GTP-binding protein YchF [Escherichia coli KO11] gi|323937924|gb|EGB34188.1| GTP-binding protein YchF [Escherichia coli E1520] gi|323942482|gb|EGB38650.1| GTP-binding protein YchF [Escherichia coli E482] gi|323947514|gb|EGB43518.1| GTP-binding protein YchF [Escherichia coli H120] gi|323962781|gb|EGB58359.1| GTP-binding protein YchF [Escherichia coli H489] gi|323964701|gb|EGB60172.1| GTP-binding protein YchF [Escherichia coli M863] gi|323973399|gb|EGB68586.1| GTP-binding protein YchF [Escherichia coli TA007] gi|324017547|gb|EGB86766.1| GTP-binding protein YchF [Escherichia coli MS 117-3] gi|324117249|gb|EGC11156.1| GTP-binding protein YchF [Escherichia coli E1167] gi|326342751|gb|EGD66521.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli O157:H7 str. 1044] gi|326346396|gb|EGD70133.1| GTP-binding and nucleic acid-binding protein YchF [Escherichia coli O157:H7 str. 1125] gi|327253893|gb|EGE65522.1| GTP-dependent nucleic acid-binding protein engD [Escherichia coli STEC_7v] gi|331038530|gb|EGI10750.1| GTP-binding protein YchF [Escherichia coli H736] gi|331061028|gb|EGI32992.1| GTP-binding protein YchF [Escherichia coli TA143] gi|331065172|gb|EGI37067.1| GTP-binding protein YchF [Escherichia coli TA271] gi|331069959|gb|EGI41328.1| GTP-binding protein YchF [Escherichia coli TA280] gi|331075672|gb|EGI46970.1| GTP-binding protein YchF [Escherichia coli H591] gi|332092243|gb|EGI97320.1| GTP-dependent nucleic acid-binding protein engD [Shigella boydii 5216-82] gi|332094797|gb|EGI99841.1| GTP-dependent nucleic acid-binding protein engD [Shigella boydii 3594-74] gi|332097828|gb|EGJ02801.1| GTP-dependent nucleic acid-binding protein engD [Shigella dysenteriae 155-74] gi|332101959|gb|EGJ05305.1| translation-associated GTPase [Shigella sp. D9] gi|332342785|gb|AEE56119.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli UMNK88] gi|332757856|gb|EGJ88183.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri 4343-70] gi|332759373|gb|EGJ89681.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri 2747-71] gi|332760297|gb|EGJ90587.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri K-671] gi|332767437|gb|EGJ97631.1| hypothetical protein SF293071_1479 [Shigella flexneri 2930-71] gi|333005042|gb|EGK24562.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri VA-6] gi|333007536|gb|EGK27014.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri K-272] gi|333019223|gb|EGK38510.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri K-304] gi|333019916|gb|EGK39188.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri K-227] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|300690284|ref|YP_003751279.1| GTP-dependent nucleic acid-binding protein engD [Ralstonia solanacearum PSI07] gi|299077344|emb|CBJ49969.1| GTP-dependent nucleic acid-binding protein engD [Ralstonia solanacearum PSI07] Length = 364 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDTRLTALADIVRPERVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 66 AVVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENV 112 >gi|298714678|emb|CBJ27603.1| PYchF, plastid YchF-like GTPase [Ectocarpus siliculosus] Length = 415 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 22/114 (19%) Query: 154 LKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVK--EGYKEFI- 209 +KLK GI+G+PN GKST +VT A+ + A+YPF T+ PN+G+V+ +G + + Sbjct: 51 MKLK----TGIVGMPNVGKSTLFNAVTEAQGAMCANYPFATIEPNIGVVEVPDGRLKVLA 106 Query: 210 --------------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 107 EINKSVKTVPSTLDFYDIAGLVKGASKGEGLGNQFLANIRECDAIVHVVRCFED 160 >gi|253773798|ref|YP_003036629.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161285|ref|YP_003044393.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli B str. REL606] gi|297516812|ref|ZP_06935198.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli OP50] gi|242376982|emb|CAQ31705.1| putative GTP-binding protein [Escherichia coli BL21(DE3)] gi|253324842|gb|ACT29444.1| GTP-binding protein YchF [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973186|gb|ACT38857.1| translation-associated GTPase [Escherichia coli B str. REL606] gi|253977400|gb|ACT43070.1| translation-associated GTPase [Escherichia coli BL21(DE3)] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|237654287|ref|YP_002890601.1| GTP-dependent nucleic acid-binding protein EngD [Thauera sp. MZ1T] gi|237625534|gb|ACR02224.1| GTP-binding protein YchF [Thauera sp. MZ1T] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T+A + +YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIQAENYPFCTIEPNVGIVEVPDPRLAALSEIVKPQKIQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++H+V ++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVHVVRCFADD 110 >gi|218549106|ref|YP_002382897.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia fergusonii ATCC 35469] gi|218356647|emb|CAQ89273.1| putative GTP-binding protein [Escherichia fergusonii ATCC 35469] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVEPQRTLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|332710494|ref|ZP_08430441.1| GTP-binding protein YchF [Lyngbya majuscula 3L] gi|332350825|gb|EGJ30418.1| GTP-binding protein YchF [Lyngbya majuscula 3L] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-------------KEGYK-- 206 GI+GLPN GKST F A V AK A++PF T+ PN+G+V E K Sbjct: 5 GIVGLPNVGKSTLFNALVANAKADAANFPFCTIEPNVGVVAVPDQRLQVLAKISESEKIV 64 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + ++H+V +++ Sbjct: 65 PTRIEFV--DIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFDDD 110 >gi|170768134|ref|ZP_02902587.1| GTP-binding protein EngD [Escherichia albertii TW07627] gi|170122900|gb|EDS91831.1| GTP-binding protein EngD [Escherichia albertii TW07627] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|220913291|ref|YP_002488600.1| GTP-dependent nucleic acid-binding protein EngD [Arthrobacter chlorophenolicus A6] gi|219860169|gb|ACL40511.1| GTP-binding protein YchF [Arthrobacter chlorophenolicus A6] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI+GLPN GKST ++TR + A+YPF T+ PN+G+V G + + Sbjct: 7 IGIVGLPNVGKSTLFNALTRNQVLAANYPFATIEPNVGVVNLPDPRLAKLAEIFGSQRLL 66 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI GI+K A +G G+G++FL + + ++ ++ Sbjct: 67 PAPVSFVDIAGIVKGASEGEGLGNKFLANIREAQAIAQVIRVFDD 111 >gi|212711986|ref|ZP_03320114.1| hypothetical protein PROVALCAL_03062 [Providencia alcalifaciens DSM 30120] gi|212685508|gb|EEB45036.1| hypothetical protein PROVALCAL_03062 [Providencia alcalifaciens DSM 30120] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++K A +G G+G++FL + T + H+V E + + A Q ++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGQVDPAADI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 EVINTEL-------ALSDLDTCE 141 >gi|324113962|gb|EGC07936.1| GTP-binding protein YchF [Escherichia fergusonii B253] gi|325497522|gb|EGC95381.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia fergusonii ECD227] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|416043|gb|AAA67557.1| 35 kDa GTP-binding protein [Escherichia coli] gi|1093597|prf||2104267A ORF Length = 269 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|309782972|ref|ZP_07677692.1| GTP-binding protein YchF [Ralstonia sp. 5_7_47FAA] gi|308918396|gb|EFP64073.1| GTP-binding protein YchF [Ralstonia sp. 5_7_47FAA] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLQALADIVKPERVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 66 AVVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENV 112 >gi|294635775|ref|ZP_06714235.1| GTP-binding protein YchF [Edwardsiella tarda ATCC 23685] gi|291090875|gb|EFE23436.1| GTP-binding protein YchF [Edwardsiella tarda ATCC 23685] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|257057108|ref|YP_003134940.1| GTP-dependent nucleic acid-binding protein EngD [Saccharomonospora viridis DSM 43017] gi|256586980|gb|ACU98113.1| GTP-binding protein YchF [Saccharomonospora viridis DSM 43017] Length = 360 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++TR A+YPF T+ PN+G+V K Sbjct: 5 LGIVGLPNVGKSTLFNALTRNSVLSANYPFATIEPNVGVVPLPDPRLDKLAEIFGSEKTV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI+K A +GAG+G++FL + + + ++ ++ Sbjct: 65 PATVSFVDIAGIVKGASEGAGLGNKFLANIREANAICQVIRVFDD 109 >gi|333005379|gb|EGK24897.1| GTP-dependent nucleic acid-binding protein engD [Shigella flexneri K-218] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|301327081|ref|ZP_07220363.1| GTP-binding protein YchF [Escherichia coli MS 78-1] gi|300846334|gb|EFK74094.1| GTP-binding protein YchF [Escherichia coli MS 78-1] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|218247856|ref|YP_002373227.1| GTP-dependent nucleic acid-binding protein EngD [Cyanothece sp. PCC 8801] gi|257060823|ref|YP_003138711.1| GTP-dependent nucleic acid-binding protein EngD [Cyanothece sp. PCC 8802] gi|218168334|gb|ACK67071.1| GTP-binding protein YchF [Cyanothece sp. PCC 8801] gi|256590989|gb|ACV01876.1| GTP-binding protein YchF [Cyanothece sp. PCC 8802] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 GI+GLPN GKST F A V AK A++PF T+ PN+G+V + +LA Sbjct: 5 GIVGLPNVGKSTLFNALVANAKADAANFPFCTIEPNVGVVSVPDERLQVLANLSKSEKIV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A QG G+G++FL + ++H+V +++ Sbjct: 65 PTRIEFVDIAGLVKGASQGEGLGNQFLANIREVDAIVHVVRCFDDD 110 >gi|121595910|ref|YP_987806.1| GTP-binding protein YchF [Acidovorax sp. JS42] gi|222112098|ref|YP_002554362.1| gtp-binding protein ychf [Acidovorax ebreus TPSY] gi|120607990|gb|ABM43730.1| GTP-binding protein YchF [Acidovorax sp. JS42] gi|221731542|gb|ACM34362.1| GTP-binding protein YchF [Acidovorax ebreus TPSY] Length = 364 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN G+V+ + E I Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNTGVVEVPDPRLQQLAEIINPERIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++ A +G G+G++FL H T ++++V E+ Sbjct: 66 AIVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFED 109 >gi|74312457|ref|YP_310876.1| GTP-dependent nucleic acid-binding protein EngD [Shigella sonnei Ss046] gi|73855934|gb|AAZ88641.1| putative GTP-binding protein [Shigella sonnei Ss046] gi|323168373|gb|EFZ54054.1| GTP-dependent nucleic acid-binding protein engD [Shigella sonnei 53G] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|325181899|emb|CCA16353.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 422 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IG +G P+AGKSTF +VT K K ++PFTT+ PN GI Sbjct: 5 IGCVGKPSAGKSTFFNAVTDGKAKTGNFPFTTIEPNEGITYFMIQCPCVAKNKSSICQPH 64 Query: 203 -------EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 Y L D+ G+I A +GAG+G++FL +VL+HI+ Sbjct: 65 YGKCVQGTRYIPIKLLDVAGLIPGASEGAGLGNKFLDDLRHANVLMHII 113 >gi|227497820|ref|ZP_03928005.1| GTP-binding protein [Actinomyces urogenitalis DSM 15434] gi|226832780|gb|EEH65163.1| GTP-binding protein [Actinomyces urogenitalis DSM 15434] Length = 365 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-----------------VKEG 204 IGI+GLPN GKST ++TRA A+YPF T+ PN+GI VK Sbjct: 5 IGIVGLPNVGKSTLFNALTRATVLAANYPFATIEPNVGIVPLPDERLDRLAEMFHSVKTV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI++ A +G G+G++FL + + + A ++ Sbjct: 65 PATVSFVDIAGIVRGASEGEGLGNQFLANIREADAICMVTRAFDD 109 >gi|297202131|ref|ZP_06919528.1| translation-associated GTPase [Streptomyces sviceus ATCC 29083] gi|197713568|gb|EDY57602.1| translation-associated GTPase [Streptomyces sviceus ATCC 29083] Length = 362 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 22/110 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA---------- 211 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V G + LA Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVV--GVPDPRLAKLAEIFSSQK 62 Query: 212 ---------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI+K A +G G+G++FL + + + ++ A +ENV Sbjct: 63 ILPATVDFVDIAGIVKGASEGEGLGNKFLANIRESDAICQVIRAFKDENV 112 >gi|156933666|ref|YP_001437582.1| GTP-dependent nucleic acid-binding protein EngD [Cronobacter sakazakii ATCC BAA-894] gi|156531920|gb|ABU76746.1| hypothetical protein ESA_01488 [Cronobacter sakazakii ATCC BAA-894] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKIAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ A +++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVNPAEDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 DTINTEL-------ALSDLDTCE 141 >gi|126661933|ref|ZP_01732932.1| translation-associated GTPase [Flavobacteria bacterium BAL38] gi|126625312|gb|EAZ96001.1| translation-associated GTPase [Flavobacteria bacterium BAL38] Length = 364 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G+V +E + Sbjct: 4 GIVGLPNVGKSTLFNCLSNAKAQSANFPFCTIEPNIGVVNVPDPRIARLEELVKPERVQM 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + + ++H++ + + Sbjct: 64 ATVDIVDIAGLVKGASKGEGLGNQFLGNIRECNAIIHVLRCFDND 108 >gi|324513520|gb|ADY45555.1| GTP-binding protein tag-210 [Ascaris suum] Length = 400 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 22/132 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 +GI+GLPN GKSTF +T+++ + ++PF T+ PN V K F Sbjct: 28 MGILGLPNVGKSTFFNVLTKSQAQAENFPFCTIDPNESRVPVSDKRFDWLVEHFKPASRV 87 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILD 260 + DI G++K A +G G+G+ FL H L H+ A +++ V+ + D Sbjct: 88 CAFLNVVDIAGLVKGASEGQGLGNAFLSHVSACDALFHLCRAFDDDDVTHVEGDVNPVRD 147 Query: 261 ELSAYNSELRKK 272 L +SEL KK Sbjct: 148 -LDIISSELIKK 158 >gi|241664357|ref|YP_002982717.1| GTP-dependent nucleic acid-binding protein EngD [Ralstonia pickettii 12D] gi|240866384|gb|ACS64045.1| GTP-binding protein YchF [Ralstonia pickettii 12D] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDARLQALADIVKPERVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 66 AVVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDENV 112 >gi|13541840|ref|NP_111528.1| translation-associated GTPase [Thermoplasma volcanium GSS1] gi|14325276|dbj|BAB60180.1| GTP-binding protein [Thermoplasma volcanium GSS1] Length = 382 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 33/155 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IG+IG PN GKSTF ++ T + +I ++PFTT+ PNLG+ +EG Sbjct: 5 IGLIGEPNVGKSTFFSAATENEAEINNFPFTTIKPNLGMTYFVVKCPEVEISGKCNPREG 64 Query: 205 YKE-------FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 Y E + D+PG+I+ A +G G+G+ FL + +L + A ++ + Sbjct: 65 YCENGNRHIPVQIIDVPGLIEGASEGKGMGNEFLDNIRDVDSILLLFDASAGDIATVRKS 124 Query: 258 ILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 I SEL K I SQ D D +RK Sbjct: 125 I----EMVKSELLKWI-----SQRIYSDWDHFSRK 150 >gi|331652241|ref|ZP_08353260.1| GTP-binding protein YchF [Escherichia coli M718] gi|331050519|gb|EGI22577.1| GTP-binding protein YchF [Escherichia coli M718] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|296101950|ref|YP_003612096.1| translation-associated GTPase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056409|gb|ADF61147.1| translation-associated GTPase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|297192332|ref|ZP_06909730.1| translation-associated GTPase [Streptomyces pristinaespiralis ATCC 25486] gi|197719685|gb|EDY63593.1| translation-associated GTPase [Streptomyces pristinaespiralis ATCC 25486] Length = 362 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 22/110 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA---------- 211 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V G + LA Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVV--GVPDSRLAVLAEIFGSQR 62 Query: 212 ---------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI++ A +G G+G++FL + + + ++ A +ENV Sbjct: 63 ILPATVDFVDIAGIVRGASEGEGLGNKFLANIRESDAICQVIRAFKDENV 112 >gi|149238149|ref|XP_001524951.1| GTP-binding protein 1 [Lodderomyces elongisporus NRRL YB-4239] gi|146451548|gb|EDK45804.1| GTP-binding protein 1 [Lodderomyces elongisporus NRRL YB-4239] Length = 368 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 2/112 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+FL+ VT K + A+Y FTTL GI++ E + D+PGIIK Sbjct: 65 ARVSLIGFPSVGKSSFLSKVTNTKSEAANYEFTTLTSVGGILEYNGAEVQIVDLPGIIKA 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 A QG G G + + + + ++L ++ A + Q Q + +EL + L K Sbjct: 125 AAQGKGRGRQVIAVSRTSDLILMVLDATKSEDQR--QILENELESMGIRLNK 174 >gi|330999046|ref|ZP_08322771.1| GTP-binding protein YchF [Parasutterella excrementihominis YIT 11859] gi|329575788|gb|EGG57314.1| GTP-binding protein YchF [Parasutterella excrementihominis YIT 11859] Length = 364 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 24/129 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLAKLAEIVSPQRIVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + + HIV ++N+ A + L+ Sbjct: 66 ATVEFV--DIAGLVAGASKGEGLGNQFLANIRECDAIAHIVRCFNDDNIVHVAGHVAPLE 123 Query: 261 ELSAYNSEL 269 ++S N EL Sbjct: 124 DISVINMEL 132 >gi|290475207|ref|YP_003468093.1| putative GTP-binding protein with nucleoside triP hydrolase domain [Xenorhabdus bovienii SS-2004] gi|289174526|emb|CBJ81320.1| putative GTP-binding protein with nucleoside triP hydrolase domain [Xenorhabdus bovienii SS-2004] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|284053277|ref|ZP_06383487.1| GTP-dependent nucleic acid-binding protein EngD [Arthrospira platensis str. Paraca] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 GI+GLPN GKST F A V AK + A++PF T+ PN+G+V K E I+ Sbjct: 5 GIVGLPNVGKSTLFNALVANAKAQAANFPFCTIEPNVGVVAVPDERLQVLAKISNSEQIV 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A QG G+G++FL H ++ +V + + Sbjct: 65 PTRIEFVDIAGLVQGASQGEGLGNQFLSHIREVDAIVQVVRCFDND 110 >gi|260598224|ref|YP_003210795.1| GTP-binding protein YchF [Cronobacter turicensis z3032] gi|260217401|emb|CBA31468.1| GTP-dependent nucleic acid-binding protein engD [Cronobacter turicensis z3032] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKIAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|257783996|ref|YP_003179213.1| GTP-binding protein YchF [Atopobium parvulum DSM 20469] gi|257472503|gb|ACV50622.1| GTP-binding protein YchF [Atopobium parvulum DSM 20469] Length = 354 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 17/100 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------ 209 IGI+GLPN GKST ++TR A+YPF T+ PN+GIV + E + Sbjct: 5 IGIVGLPNVGKSTLFTALTRKGGLAANYPFATIDPNVGIVDVPDARLQKLAEIVNPGRIM 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI G++K A++G G+G++FL + T + +V Sbjct: 65 PATVEFVDIAGLVKGANEGEGLGNQFLANIRNTDAICEVV 104 >gi|238919461|ref|YP_002932976.1| GTP-dependent nucleic acid-binding protein EngD [Edwardsiella ictaluri 93-146] gi|269138749|ref|YP_003295450.1| translation-associated GTPase [Edwardsiella tarda EIB202] gi|238869030|gb|ACR68741.1| GTP-binding protein YchF [Edwardsiella ictaluri 93-146] gi|267984410|gb|ACY84239.1| translation-associated GTPase [Edwardsiella tarda EIB202] gi|304558742|gb|ADM41406.1| GTP-binding and nucleic acid-binding protein YchF [Edwardsiella tarda FL6-60] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|237785196|ref|YP_002905901.1| GTP-dependent nucleic acid-binding protein EngD [Corynebacterium kroppenstedtii DSM 44385] gi|237758108|gb|ACR17358.1| putative GTP-binding protein [Corynebacterium kroppenstedtii DSM 44385] Length = 370 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK--EFI 209 +GI+GLPN GKST ++TR A+YPF T+ PN+G+V+ E + E I Sbjct: 16 LGIVGLPNVGKSTLFNALTRNNVLAANYPFATIEPNVGLVELPDARLKRLAEMFDSAEII 75 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI GI+K A +G G+G++FL + + +V A ++ Sbjct: 76 PATVSFVDIAGIVKGASEGEGLGNQFLANIREADAICQVVRAFTDD 121 >gi|157145515|ref|YP_001452834.1| GTP-dependent nucleic acid-binding protein EngD [Citrobacter koseri ATCC BAA-895] gi|157082720|gb|ABV12398.1| hypothetical protein CKO_01258 [Citrobacter koseri ATCC BAA-895] Length = 363 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G++K A +G G+G++FL + T + H+V E +N+ A +++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVNPAEDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 DVINTEL-------ALSDLDTCE 141 >gi|268592701|ref|ZP_06126922.1| GTP-binding protein YchF [Providencia rettgeri DSM 1131] gi|291311843|gb|EFE52296.1| GTP-binding protein YchF [Providencia rettgeri DSM 1131] Length = 363 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|300723042|ref|YP_003712340.1| putative GTP-binding protein with nucleoside triP hydrolase domain [Xenorhabdus nematophila ATCC 19061] gi|297629557|emb|CBJ90160.1| putative GTP-binding protein with nucleoside triP hydrolase domain [Xenorhabdus nematophila ATCC 19061] Length = 363 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|291565998|dbj|BAI88270.1| probable GTP-binding protein [Arthrospira platensis NIES-39] Length = 363 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 GI+GLPN GKST F A V AK + A++PF T+ PN+G+V K E I+ Sbjct: 5 GIVGLPNVGKSTLFNALVANAKAQAANFPFCTIEPNVGVVAVPDERLQVLAKISNSEQIV 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A QG G+G++FL H ++ +V + + Sbjct: 65 PTRIEFVDIAGLVQGASQGEGLGNQFLSHIREVDAIVQVVRCFDND 110 >gi|294505833|ref|YP_003569891.1| Conserved hypothetical protein containing GTP-binding site [Salinibacter ruber M8] gi|294342161|emb|CBH22939.1| Conserved hypothetical protein containing GTP-binding site [Salinibacter ruber M8] Length = 364 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 24/158 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI- 209 G++GLPN GKST +++ A + +YPF T+ PN+G+V G E I Sbjct: 6 GLVGLPNVGKSTIFNALSSAGAEADNYPFCTVDPNVGVVPVPDDRLPRVAELAGSPETIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---EL 262 DI G+++ A +G G+G++FL ++H+V E+ A +D ++ Sbjct: 66 TSIEFVDIAGLVEGAAEGEGLGNQFLAQIREVDAIIHVVRCFEDEEVAHVAGSVDPTRDV 125 Query: 263 SAYNSE-LRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 N+E L K +E V ++DTV T A+K ++ A + Sbjct: 126 EVINTELLLKDLETVE-KRLDTV--KTAAKKGDQEAAE 160 >gi|255003303|ref|ZP_05278267.1| putative GTP binding protein (hflX) [Anaplasma marginale str. Puerto Rico] Length = 75 Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 44/75 (58%), Positives = 57/75 (76%) Query: 21 ISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSG 80 +SFRREKFIEFGGPDGG+GG GG V A+S +NTL+ FRY QH +A++G+ G + + G Sbjct: 1 MSFRREKFIEFGGPDGGNGGNGGSVIFVASSAVNTLLYFRYNQHIRAENGKAGSGKGKFG 60 Query: 81 AKGEDVVLTVPVGTQ 95 A G + V+ VPVGTQ Sbjct: 61 AAGRNRVVEVPVGTQ 75 >gi|161503103|ref|YP_001570215.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864450|gb|ABX21073.1| hypothetical protein SARI_01168 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 363 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|127513847|ref|YP_001095044.1| translation-associated GTPase [Shewanella loihica PV-4] gi|126639142|gb|ABO24785.1| GTP-binding protein YchF [Shewanella loihica PV-4] Length = 363 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 27/151 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + +++PF T+ PN G+V E E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEASNFPFCTIEPNTGVVPVPDPRLEALAEIVKPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++ A +G G+G++FL + T + H+V E EN+ + ++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDENIVHVANKVSPASDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 N+EL L+ +D+ + L ++K Sbjct: 126 EVINTEL-------ALADLDSCERAILRQQK 149 >gi|115438064|ref|XP_001217970.1| GTP-binding protein 1 [Aspergillus terreus NIH2624] gi|114188785|gb|EAU30485.1| GTP-binding protein 1 [Aspergillus terreus NIH2624] Length = 367 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKSTFL+ +T+ K + A Y FTTL G+++ G E + D+PGII+ Sbjct: 64 ARVALVGFPSVGKSTFLSKITKTKSEAAAYSFTTLTAIPGVLEYGGAEIQILDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A ++ Q A Sbjct: 124 AAEGKGRGRQVISAAKTSDLILMVLDATKKAEQRA 158 >gi|116515064|ref|YP_802693.1| GTP-binding protein [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256918|gb|ABJ90600.1| GTP-binding protein [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 347 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 17/110 (15%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI-------- 209 ++ GIIGLPN GKS +T+ ++PF T+ PN+GI+ I Sbjct: 1 MVYKFGIIGLPNVGKSALFNKITKLNVPSKNFPFCTIKPNIGIISIFDNRLINISNNLSS 60 Query: 210 ---------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A G G+G++FL++ H ++H+V + N Sbjct: 61 KNIIYSCVKIIDIAGLVKGASLGEGLGNKFLENIRDCHAIIHVVRCFKNN 110 >gi|319764314|ref|YP_004128251.1| gtp-binding protein ychf [Alicycliphilus denitrificans BC] gi|317118875|gb|ADV01364.1| GTP-binding protein YchF [Alicycliphilus denitrificans BC] Length = 364 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNTGVVEVPDPRLAQLAEIVKPERTVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL H T ++++V E+ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFED 109 >gi|168462736|ref|ZP_02696667.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195634405|gb|EDX52757.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 363 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|160896981|ref|YP_001562563.1| GTP-binding protein YchF [Delftia acidovorans SPH-1] gi|160362565|gb|ABX34178.1| GTP-binding protein YchF [Delftia acidovorans SPH-1] Length = 364 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNTGVVEVPDPRLQKLADIITPERIVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL H T ++++V E+ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFED 109 >gi|330826387|ref|YP_004389690.1| GTP-binding protein YchF [Alicycliphilus denitrificans K601] gi|329311759|gb|AEB86174.1| GTP-binding protein YchF [Alicycliphilus denitrificans K601] Length = 364 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNTGVVEVPDPRLAQLAEIVKPERTVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL H T ++++V E+ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFED 109 >gi|167993231|ref|ZP_02574326.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205328657|gb|EDZ15421.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261246970|emb|CBG24787.1| putative ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993735|gb|ACY88620.1| translation-associated GTPase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158308|emb|CBW17807.1| putative ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|323130056|gb|ADX17486.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332988671|gb|AEF07654.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 363 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|16760677|ref|NP_456294.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765125|ref|NP_460740.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141564|ref|NP_804906.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62180348|ref|YP_216765.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161613717|ref|YP_001587682.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167553610|ref|ZP_02347359.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168233819|ref|ZP_02658877.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168241370|ref|ZP_02666302.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168259987|ref|ZP_02681960.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168820526|ref|ZP_02832526.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194446679|ref|YP_002041036.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448843|ref|YP_002045829.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471403|ref|ZP_03077387.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737864|ref|YP_002114816.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251280|ref|YP_002146243.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263660|ref|ZP_03163734.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198243402|ref|YP_002215359.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200391121|ref|ZP_03217732.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204927806|ref|ZP_03219007.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352548|ref|YP_002226349.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856709|ref|YP_002243360.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213426487|ref|ZP_03359237.1| translation-associated GTPase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213650576|ref|ZP_03380629.1| translation-associated GTPase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213850368|ref|ZP_03381266.1| translation-associated GTPase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224583727|ref|YP_002637525.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238913685|ref|ZP_04657522.1| translation-associated GTPase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289829004|ref|ZP_06546704.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25330229|pir||AB0721 probable ATP/GTP-binding protein STY1910 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16420314|gb|AAL20699.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502973|emb|CAD02139.1| putative ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29137191|gb|AAO68755.1| putative ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62127981|gb|AAX65684.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161363081|gb|ABX66849.1| hypothetical protein SPAB_01442 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194405342|gb|ACF65564.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407147|gb|ACF67366.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457767|gb|EDX46606.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713366|gb|ACF92587.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197214983|gb|ACH52380.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241915|gb|EDY24535.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197937918|gb|ACH75251.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603566|gb|EDZ02112.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204323148|gb|EDZ08344.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205272329|emb|CAR37209.1| putative ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205321986|gb|EDZ09825.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205332111|gb|EDZ18875.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339463|gb|EDZ26227.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205342710|gb|EDZ29474.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205350649|gb|EDZ37280.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708512|emb|CAR32833.1| putative ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468254|gb|ACN46084.1| putative ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|312912774|dbj|BAJ36748.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085714|emb|CBY95492.1| GTP-dependent nucleic acid-binding protein engD [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224415|gb|EFX49478.1| GTP-binding and nucleic acid-binding protein YchF [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616780|gb|EFY13688.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620409|gb|EFY17275.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625689|gb|EFY22508.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626139|gb|EFY22949.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633745|gb|EFY30485.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638899|gb|EFY35592.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640882|gb|EFY37531.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644104|gb|EFY40649.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649175|gb|EFY45613.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655334|gb|EFY51642.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660908|gb|EFY57139.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662794|gb|EFY59001.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667978|gb|EFY64137.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674260|gb|EFY70354.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678541|gb|EFY74599.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683200|gb|EFY79216.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686893|gb|EFY82871.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322714823|gb|EFZ06394.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323195216|gb|EFZ80396.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200192|gb|EFZ85278.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204520|gb|EFZ89524.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207363|gb|EFZ92311.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213716|gb|EFZ98498.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217348|gb|EGA02067.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219235|gb|EGA03730.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323228012|gb|EGA12157.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231369|gb|EGA15482.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235809|gb|EGA19888.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240378|gb|EGA24421.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245271|gb|EGA29271.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249842|gb|EGA33741.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252832|gb|EGA36668.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258535|gb|EGA42204.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263295|gb|EGA46831.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266744|gb|EGA50230.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268950|gb|EGA52406.1| GTP-binding protein YchF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326623105|gb|EGE29450.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627607|gb|EGE33950.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 363 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|219684719|ref|ZP_03539662.1| GTP-binding protein YchF [Borrelia garinii PBr] gi|219685848|ref|ZP_03540656.1| GTP-binding protein YchF [Borrelia garinii Far04] gi|219672081|gb|EED29135.1| GTP-binding protein YchF [Borrelia garinii PBr] gi|219672622|gb|EED29653.1| GTP-binding protein YchF [Borrelia garinii Far04] Length = 368 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST +S+T +K +IA+YPF T+ PN+GIV+ Sbjct: 6 GIVGLPNVGKSTLFSSLTSSKVEIANYPFCTIEPNVGIVEIPDERLLKISECIVPQKIIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A G G+G++FL + +++H+V EE Sbjct: 66 AVMEFV--DIAGLVKGASTGEGLGNKFLANIREVSLIVHVVRCFEE 109 >gi|120609581|ref|YP_969259.1| GTP-binding protein YchF [Acidovorax citrulli AAC00-1] gi|120588045|gb|ABM31485.1| GTP-binding protein YchF [Acidovorax citrulli AAC00-1] Length = 364 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNTGVVEVPDPRLQQLAGIITPERIVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL H T ++++V E+ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFED 109 >gi|326315655|ref|YP_004233327.1| GTP-binding protein YchF [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372491|gb|ADX44760.1| GTP-binding protein YchF [Acidovorax avenae subsp. avenae ATCC 19860] Length = 364 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNTGVVEVPDPRLQQLAGIITPERIVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL H T ++++V E+ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFED 109 >gi|312144686|ref|YP_003996132.1| GTP-binding protein YchF [Halanaerobium sp. 'sapolanicus'] gi|311905337|gb|ADQ15778.1| GTP-binding protein YchF [Halanaerobium sp. 'sapolanicus'] Length = 363 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 21/107 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 IGI+GLPN GKST ++T A +YPF T+ PN+G+V E Y+ Sbjct: 3 IGIVGLPNVGKSTLFNALTEAGADAENYPFCTIDPNIGVVPVPDTRLDWLAEVYQPKKKT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G+++ A +G G+G++FL H + +V ++ Sbjct: 63 PTVIEFV--DIAGLVEGASRGEGLGNKFLAHIREVDAIAQVVRCFDD 107 >gi|56413295|ref|YP_150370.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362220|ref|YP_002141857.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127552|gb|AAV77058.1| putative ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093697|emb|CAR59169.1| putative ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 363 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|58698487|ref|ZP_00373393.1| GTP-binding protein YchF [Wolbachia endosymbiont of Drosophila ananassae] gi|58535002|gb|EAL59095.1| GTP-binding protein YchF [Wolbachia endosymbiont of Drosophila ananassae] Length = 364 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 78/143 (54%), Gaps = 22/143 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKST ++T + + A+YPF T+ PN+G + K Sbjct: 4 NCGIVGLPNIGKSTLFNALTESSAAEAANYPFCTIEPNIGKISIKDQRLKQIAAIAGSEK 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 Y + + DI G++K A +G G+G++FL H ++H++ ++ + +D + Sbjct: 64 IIYNQLEVVDIAGLVKGASKGEGLGNKFLSHIREVDAIVHLLRCFSDDDISHVHSKIDPI 123 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 S ++E+ ++E++ L+ ID+++ Sbjct: 124 S--DAEVV-EMELI-LADIDSIE 142 >gi|254797235|ref|YP_003082076.1| GTP-binding protein YchF [Neorickettsia risticii str. Illinois] gi|254590462|gb|ACT69824.1| GTP-binding protein YchF [Neorickettsia risticii str. Illinois] Length = 350 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEG----------------- 204 GI+GLPN GKST ++T+ + + A+YPF T+ PN+ V E Sbjct: 6 GIVGLPNVGKSTLFNAMTQTQAAEAANYPFCTIEPNIAKVPEYDERLVQIAEISAAQKVI 65 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + + + DI G++K A++G G+G++FL H +++H++ ++ Sbjct: 66 FSQLEIVDIAGLVKGANKGEGLGNKFLSHIREVDLIIHVLRCFPDD 111 >gi|111115060|ref|YP_709678.1| GTP-dependent nucleic acid-binding protein EngD [Borrelia afzelii PKo] gi|110890334|gb|ABH01502.1| conserved hypothetical GTP-binding protein [Borrelia afzelii PKo] Length = 368 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST +S+T +K +IA+YPF T+ PN+GIV+ Sbjct: 6 GIVGLPNVGKSTLFSSLTSSKVEIANYPFCTIEPNVGIVEIPDERLLKISECIVPQKIIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A G G+G++FL + +++H+V EE Sbjct: 66 AVMEFV--DIAGLVKGASTGEGLGNKFLANIREVSLIVHVVRCFEE 109 >gi|50365475|ref|YP_053900.1| translation-associated GTPase [Mesoplasma florum L1] gi|50364031|gb|AAT76016.1| conserved GTPase [Mesoplasma florum L1] Length = 364 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 17/104 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++T + + A+YPF T+ PN+G+V K+ Sbjct: 5 VGIVGLPNVGKSTLFNAITNSNVEAANYPFATIEPNVGVVEVPDERLDKINEIFNSKKKI 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 DI G+I A +G G+G+ FL + T + +V E Sbjct: 65 ATTIEFVDIAGLIAGASKGEGLGNAFLANIRETDAICEVVRCFE 108 >gi|168237842|ref|ZP_02662900.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197289279|gb|EDY28646.1| GTP-binding protein EngD [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 363 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|307332545|ref|ZP_07611598.1| GTP-binding protein YchF [Streptomyces violaceusniger Tu 4113] gi|306881801|gb|EFN12934.1| GTP-binding protein YchF [Streptomyces violaceusniger Tu 4113] Length = 409 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 22/119 (18%) Query: 155 KLKLIAD----IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV--------- 201 KL+ +A+ IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V Sbjct: 41 KLREVANVSLTIGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDPRLDK 100 Query: 202 --------KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 ++ DI GI+K A +G G+G++FL + + + ++ A +ENV Sbjct: 101 LAEIFGSARKLPATVDFVDIAGIVKGASEGEGLGNKFLANIRESDAICQVIRAFKDENV 159 >gi|190346769|gb|EDK38935.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC 6260] Length = 367 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+FL VT K + A+Y FTTL GI++ E + D+PGIIK Sbjct: 64 ARVSLIGFPSVGKSSFLNKVTNTKSEAANYEFTTLTSVGGILEYNGAEVQIVDLPGIIKQ 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A QG G G + + + + +++ ++ A + + Q Q + +EL + L K+ Sbjct: 124 ASQGKGRGKQVIAVSRTSDLIMMVLDATKSHDQR--QILENELESMGIRLNKE 174 >gi|34581439|ref|ZP_00142919.1| probable GTP-binding protein [Rickettsia sibirica 246] gi|28262824|gb|EAA26328.1| probable GTP-binding protein [Rickettsia sibirica 246] Length = 365 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 22/108 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNL-------------------GIV 201 +GI+GLPN GKST ++T +K A+YPF T+ PN G + Sbjct: 5 LGIVGLPNVGKSTLFNALTASKAADAANYPFCTIEPNSSKVLVPDARLHKLASLAGSGKI 64 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y EF+ DI G++K A +G G+G++FL H +LH++ E+ Sbjct: 65 IPSYIEFV--DIAGLVKGASKGEGLGNKFLSHIREVDAILHVLRCFED 110 >gi|307699892|ref|ZP_07636943.1| GTP-binding protein YchF [Mobiluncus mulieris FB024-16] gi|307614930|gb|EFN94148.1| GTP-binding protein YchF [Mobiluncus mulieris FB024-16] Length = 361 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 IGI GLPN GKST ++TRA A+YPF T+ PN+G+V K +LA Sbjct: 5 IGIAGLPNVGKSTIFNALTRANVLAANYPFATIEPNVGVVPLPDKRLGVLAKMFNSQKIV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI+K A +G G+G++FL + + + A + Sbjct: 65 PATVSFVDIAGIVKGASKGEGLGNQFLANIREADAICQVTRAFTD 109 >gi|168830300|gb|ACA34397.1| YchF [uncultured bacterium pTW2] Length = 363 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A A++PF T+ PN+G+V E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNALAEIVKPQKVIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A G G+G++FL H + H+V E + Sbjct: 66 TAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFEND 110 >gi|216263883|ref|ZP_03435877.1| GTP-binding protein YchF [Borrelia afzelii ACA-1] gi|215979927|gb|EEC20749.1| GTP-binding protein YchF [Borrelia afzelii ACA-1] Length = 368 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST +S+T +K +IA+YPF T+ PN+GIV+ Sbjct: 6 GIVGLPNVGKSTLFSSLTSSKVEIANYPFCTIEPNVGIVEIPDERLLKISECIVPQKIIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A G G+G++FL + +++H+V EE Sbjct: 66 AVMEFV--DIAGLVKGASTGEGLGNKFLANIREVSLIVHVVRCFEE 109 >gi|300773496|ref|ZP_07083365.1| GTP-binding protein YchF [Sphingobacterium spiritivorum ATCC 33861] gi|300759667|gb|EFK56494.1| GTP-binding protein YchF [Sphingobacterium spiritivorum ATCC 33861] Length = 366 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ + + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLNKLADLVKPQRLVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G++K A +G G+G++FL + T+ ++H++ ++ Sbjct: 66 NTIEIVDIAGLVKGASKGEGLGNQFLGNIRTTNAIIHVLRCFDD 109 >gi|255956077|ref|XP_002568791.1| Pc21g17960 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590502|emb|CAP96693.1| Pc21g17960 [Penicillium chrysogenum Wisconsin 54-1255] Length = 368 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 57/95 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKSTFL+ +T+ K + A Y FTTL G+++ G E + D+PGII+ Sbjct: 65 ARVALVGFPSVGKSTFLSKITKTKSEAAAYSFTTLTAIPGVLEYGGAEIQILDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 125 ASEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA 159 >gi|89073085|ref|ZP_01159624.1| putative GTP-binding protein [Photobacterium sp. SKA34] gi|89051038|gb|EAR56495.1| putative GTP-binding protein [Photobacterium sp. SKA34] Length = 363 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 26/154 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + F+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRMDALAVFVNPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 DI G++ A +G G+G++FL + T + H+V E + +D L Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDNIVHVAGRIDPL--- 122 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 + I+I+ L ++ D DT R LA + Sbjct: 123 -----EDIDIINL-ELAMADLDTCERAIFRLAKR 150 >gi|296272584|ref|YP_003655215.1| GTP-binding protein YchF [Arcobacter nitrofigilis DSM 7299] gi|296096758|gb|ADG92708.1| GTP-binding protein YchF [Arcobacter nitrofigilis DSM 7299] Length = 367 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIV-----------------KE 203 +GI+GLPN GKST ++T+A+ A +YPF T+ PN IV K Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAEAQNYPFCTIEPNKAIVPVPDKRLDALAKIVIPDKI 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y DI G+++ A +G G+G++FL + ++LH+V E+ Sbjct: 65 QYSTIDFVDIAGLVRGASKGEGLGNQFLSNIREVEMILHMVRCFED 110 >gi|227876634|ref|ZP_03994744.1| GTP-binding protein [Mobiluncus mulieris ATCC 35243] gi|227842835|gb|EEJ53034.1| GTP-binding protein [Mobiluncus mulieris ATCC 35243] Length = 361 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 IGI GLPN GKST ++TRA A+YPF T+ PN+G+V K +LA Sbjct: 5 IGIAGLPNVGKSTIFNALTRANVLAANYPFATIEPNVGVVPLPDKRLGVLAKMFNSQKIV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI+K A +G G+G++FL + + + A + Sbjct: 65 PATVSFVDIAGIVKGASKGEGLGNQFLANIREADAICQVTRAFTD 109 >gi|42520316|ref|NP_966231.1| translation-associated GTPase [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410054|gb|AAS14165.1| GTP-binding protein YchF [Wolbachia endosymbiont of Drosophila melanogaster] Length = 364 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 78/143 (54%), Gaps = 22/143 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKST ++T + + A+YPF T+ PN+G + K Sbjct: 4 NCGIVGLPNIGKSTLFNALTESSAAEAANYPFCTIEPNIGKISIKDQRLKQIAAIAGSEK 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 Y + + DI G++K A +G G+G++FL H ++H++ ++ + +D + Sbjct: 64 VIYNQLEVVDIAGLVKGASKGEGLGNKFLSHIREVDAIVHLLRCFTDDDISHIHSKIDPI 123 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 S ++E+ ++E++ L+ ID+++ Sbjct: 124 S--DAEVV-EMELI-LADIDSIE 142 >gi|227536611|ref|ZP_03966660.1| GTP-binding protein [Sphingobacterium spiritivorum ATCC 33300] gi|227243688|gb|EEI93703.1| GTP-binding protein [Sphingobacterium spiritivorum ATCC 33300] Length = 353 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK---EGYKEFI---------- 209 GI+GLPN GKST ++ AK + A++PF T+ PN+G++ E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLNKLADLVKPQRLVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G++K A +G G+G++FL + T+ ++H++ ++ Sbjct: 66 NTIEIVDIAGLVKGASKGEGLGNQFLGNIRTTNAIIHVLRCFDD 109 >gi|269976166|ref|ZP_06183162.1| GTP-binding protein YchF [Mobiluncus mulieris 28-1] gi|306817586|ref|ZP_07451329.1| GTP-binding protein YchF [Mobiluncus mulieris ATCC 35239] gi|269935495|gb|EEZ92033.1| GTP-binding protein YchF [Mobiluncus mulieris 28-1] gi|304649628|gb|EFM46910.1| GTP-binding protein YchF [Mobiluncus mulieris ATCC 35239] Length = 361 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 IGI GLPN GKST ++TRA A+YPF T+ PN+G+V K +LA Sbjct: 5 IGIAGLPNVGKSTIFNALTRANVLAANYPFATIEPNVGVVPLPDKRLGVLAKMFNSQKIV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI+K A +G G+G++FL + + + A + Sbjct: 65 PATVSFVDIAGIVKGASKGEGLGNQFLANIREADAICQVTRAFTD 109 >gi|91773897|ref|YP_566589.1| translation-associated GTPase [Methanococcoides burtonii DSM 6242] gi|91712912|gb|ABE52839.1| GTP-binding protein [Methanococcoides burtonii DSM 6242] Length = 395 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 20/105 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------------------KE 203 IG+ G PNAGKSTF + T A +IA+YPFTT+ N G+ ++ Sbjct: 5 IGLAGKPNAGKSTFFKAATLADVEIANYPFTTINANKGVTYVRAVCPCTERDKRCGNCQD 64 Query: 204 G--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G Y + D+ G++ +AH G G+G+ FL + ++H++ A Sbjct: 65 GIRYVPIEIIDVAGLVPDAHMGRGLGNTFLDELRQAQAIIHVIDA 109 >gi|239929155|ref|ZP_04686108.1| translation-associated GTPase [Streptomyces ghanaensis ATCC 14672] gi|291437492|ref|ZP_06576882.1| translation-associated GTPase [Streptomyces ghanaensis ATCC 14672] gi|291340387|gb|EFE67343.1| translation-associated GTPase [Streptomyces ghanaensis ATCC 14672] Length = 362 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 22/110 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA---------- 211 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V G + LA Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVV--GVPDARLAKLAEIFGSQR 62 Query: 212 ---------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI++ A +G G+G++FL + + + ++ A +ENV Sbjct: 63 ILPATVDFVDIAGIVRGASEGEGLGNKFLANIRESDAICQVIRAFKDENV 112 >gi|213163411|ref|ZP_03349121.1| translation-associated GTPase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 154 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|83815143|ref|YP_444175.1| translation-associated GTPase [Salinibacter ruber DSM 13855] gi|83756537|gb|ABC44650.1| GTP-binding protein YchF [Salinibacter ruber DSM 13855] Length = 400 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 24/158 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI- 209 G++GLPN GKST +++ A + +YPF T+ PN+G+V G E I Sbjct: 42 GLVGLPNVGKSTIFNALSSAGAEADNYPFCTVDPNVGVVPVPDDRLPRVAELAGSPETIP 101 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---EL 262 DI G+++ A +G G+G++FL ++H+V E+ A +D ++ Sbjct: 102 TSIEFVDIAGLVEGAAEGEGLGNQFLAQIREVDAIIHVVRCFEDEEVAHVAGSVDPTRDV 161 Query: 263 SAYNSE-LRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 N+E L K +E V ++DTV T A+K ++ A + Sbjct: 162 EVINTELLLKDLETVE-KRLDTV--KTAAKKGDQEAAE 196 >gi|254495952|ref|ZP_05108860.1| translation-associated GTPase [Legionella drancourtii LLAP12] gi|254354830|gb|EET13457.1| translation-associated GTPase [Legionella drancourtii LLAP12] Length = 354 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 31/150 (20%) Query: 167 LPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------EGYKE 207 +PN GKST ++T+A + A+YPF T+ PN+GIV + Sbjct: 1 MPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVTVPDLRLDALSAIVKPQQALPATMQ 60 Query: 208 FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDELSA 264 F+ DI GI+K A +G G+G++FL + T + H+V E + Q L ++ Sbjct: 61 FV--DIAGIVKGASKGEGLGNQFLANIRETDAIAHVVRCFENTDVIHVEGQVNPLSDIEV 118 Query: 265 YNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 N+EL L+ ++TVD L KN Sbjct: 119 INTEL-------ALADMETVDKALLKSGKN 141 >gi|89056073|ref|YP_511524.1| GTP-dependent nucleic acid-binding protein EngD [Jannaschia sp. CCS1] gi|88865622|gb|ABD56499.1| hypothetical protein Jann_3582 [Jannaschia sp. CCS1] Length = 365 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++TR A + A++PF T+ PN+G V K Sbjct: 5 MGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGDVAVPDARLDKLAAIAASKSV 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A QG G+G++FL + T + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASQGEGLGNQFLANIRETDAIAHVLRCFED 110 >gi|83950130|ref|ZP_00958863.1| GTP-binding protein YchF [Roseovarius nubinhibens ISM] gi|83838029|gb|EAP77325.1| GTP-binding protein YchF [Roseovarius nubinhibens ISM] Length = 365 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G V G ++ Sbjct: 5 MGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGEVAVPDARLDRLAEIAGSRQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A QG G+G++FL + T + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGAAQGEGLGNQFLANIRETDAIAHVLRCFED 110 >gi|300789861|ref|YP_003770152.1| translation-associated GTPase [Amycolatopsis mediterranei U32] gi|299799375|gb|ADJ49750.1| translation-associated GTPase [Amycolatopsis mediterranei U32] Length = 360 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKE---- 207 +GI+GLPN GKST ++TR A+YPF T+ PN+G+V E +K Sbjct: 5 LGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGVVPLPDPRLDKLAELHKSEKIV 64 Query: 208 ---FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI+K A +GAG+G++FL + + + ++ ++ Sbjct: 65 PAVVSFVDIAGIVKGASEGAGLGNKFLANIREANAICQVIRVFDD 109 >gi|315443132|ref|YP_004076011.1| GTP-binding protein YchF [Mycobacterium sp. Spyr1] gi|315261435|gb|ADT98176.1| GTP-binding protein YchF [Mycobacterium sp. Spyr1] Length = 360 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------KEGYKEF----- 208 ++GI+GLPN GKST ++TR A+YPF T+ PN G+V E + F Sbjct: 7 NLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNEGVVALPDPRLTELARMFGSEKI 66 Query: 209 -----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +GAG+G++FL + + + +V ++ Sbjct: 67 VPAPVTFVDIAGIVKGASEGAGLGNKFLANIRESDAICQVVRVFADD 113 >gi|317048564|ref|YP_004116212.1| GTP-binding protein YchF [Pantoea sp. At-9b] gi|316950181|gb|ADU69656.1| GTP-binding protein YchF [Pantoea sp. At-9b] Length = 363 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDLRLDQLSEIVKPQRVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILDEL 262 DI G+++ A +G G+G++FL + T + H+V E EN+ A +++ Sbjct: 66 TTMEFVDIAGLVEGASKGEGLGNKFLTNIRETDAIGHVVRCFENENIIHVAGKVNPAEDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 DIINTEL-------ALSDLDTCE 141 >gi|241956047|ref|XP_002420744.1| uncharacterized GTP-binding protein, putative [Candida dubliniensis CD36] gi|223644086|emb|CAX41829.1| uncharacterized GTP-binding protein, putative [Candida dubliniensis CD36] Length = 368 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 34/87 (39%), Positives = 53/87 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+FL+ VT K + A+Y FTTL GI++ E + D+PGIIK Sbjct: 65 ARVSLIGFPSVGKSSFLSKVTNTKSEAANYEFTTLTSVGGILEYNGAEVQIVDLPGIIKA 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 A QG G G + + + + ++L ++ A Sbjct: 125 ASQGKGRGRQVIAVSRTSDLILMVLDA 151 >gi|67523577|ref|XP_659848.1| hypothetical protein AN2244.2 [Aspergillus nidulans FGSC A4] gi|40744773|gb|EAA63929.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4] gi|259487632|tpe|CBF86451.1| TPA: GTP binding protein (Gtp1), putative (AFU_orthologue; AFUA_5G06770) [Aspergillus nidulans FGSC A4] Length = 367 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKSTFL+ +T+ K + A Y FTTL G+++ G E + D+PGII+ Sbjct: 64 ARVALVGFPSVGKSTFLSKITKTKSEAAAYSFTTLTAIPGVLEYGGAEIQILDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A ++ Q A Sbjct: 124 ASEGKGRGRQVISAAKTSDLILMVLDATKKAEQRA 158 >gi|161777474|ref|NP_342249.2| translation-associated GTPase [Sulfolobus solfataricus P2] gi|284174970|ref|ZP_06388939.1| translation-associated GTPase [Sulfolobus solfataricus 98/2] gi|261602413|gb|ACX92016.1| GTPase of unknown function [Sulfolobus solfataricus 98/2] Length = 401 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI----VKEGYKEF--------- 208 IGIIG N GKSTF A+ T +IA+ PF T+ PN GI VK + EF Sbjct: 4 IGIIGKTNVGKSTFFAAATLKDVEIANRPFVTINPNEGIGYVKVKCAHTEFNVKCNPKNS 63 Query: 209 -----------ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 L D+ G+I AH+G G+G++FL + L+H++ A Sbjct: 64 ICIEDYRFIPVKLVDVAGLIPGAHEGRGLGNKFLDDLRQADALIHVIDA 112 >gi|145222670|ref|YP_001133348.1| translation-associated GTPase [Mycobacterium gilvum PYR-GCK] gi|145215156|gb|ABP44560.1| GTP-binding protein YchF [Mycobacterium gilvum PYR-GCK] Length = 360 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------KEGYKEF----- 208 ++GI+GLPN GKST ++TR A+YPF T+ PN G+V E + F Sbjct: 7 NLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNEGVVALPDPRLTELARMFGSEKI 66 Query: 209 -----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +GAG+G++FL + + + +V ++ Sbjct: 67 VPAPVTFVDIAGIVKGASEGAGLGNKFLANIRESDAICQVVRVFADD 113 >gi|90408738|ref|ZP_01216885.1| predicted GTPase, probable translation factor [Psychromonas sp. CNPT3] gi|90310155|gb|EAS38293.1| predicted GTPase, probable translation factor [Psychromonas sp. CNPT3] Length = 363 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 31/149 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN GIV Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGIVPVPDPRLDKLAAIVNPQRVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 EF+ DI G+++ A +G G+G++FL + T + H+V E EN+ I D Sbjct: 66 TTMEFV--DIAGLVEGASKGEGLGNKFLANIRETDAIGHVVRCFEDENIVHVSGKIDPRD 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 ++ N+EL L+ +++ D L Sbjct: 124 DIEIINTEL-------ALADLESCDRSLL 145 >gi|302542807|ref|ZP_07295149.1| GTP-binding protein YchF [Streptomyces hygroscopicus ATCC 53653] gi|302460425|gb|EFL23518.1| GTP-binding protein YchF [Streptomyces himastatinicus ATCC 53653] Length = 362 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V ++ Sbjct: 5 IGIVGLPNVGKSTMFNALTKNDVLAANYPFATIEPNVGVVGVPDPRLDKLAELFGSARKL 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI+K A +G G+G++FL + + + ++ A +ENV Sbjct: 65 PATVDFVDIAGIVKGASEGEGLGNKFLANIRESDAICQVIRAFKDENV 112 >gi|289805454|ref|ZP_06536083.1| GTP-dependent nucleic acid-binding protein EngD [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 242 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|302530075|ref|ZP_07282417.1| translation-associated GTPase [Streptomyces sp. AA4] gi|302438970|gb|EFL10786.1| translation-associated GTPase [Streptomyces sp. AA4] Length = 360 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++TR A+YPF T+ PN+G+V K Sbjct: 5 LGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGVVPLPDPRLDKLAEIFSSEKTV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI+K A +GAG+G++FL + + + ++ ++ Sbjct: 65 PAVVSFVDIAGIVKGASEGAGLGNKFLANIREANAICQVIRVFDD 109 >gi|221065197|ref|ZP_03541302.1| GTP-binding protein YchF [Comamonas testosteroni KF-1] gi|220710220|gb|EED65588.1| GTP-binding protein YchF [Comamonas testosteroni KF-1] Length = 364 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNTGVVEVPDPRLDQLSEIVKPERVVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL H T ++++V E+ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFED 109 >gi|90581721|ref|ZP_01237508.1| putative GTP-binding protein [Vibrio angustum S14] gi|90437075|gb|EAS62279.1| putative GTP-binding protein [Vibrio angustum S14] Length = 363 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 26/154 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + F+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRMDALAVFVNPERIMP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 DI G++ A +G G+G++FL + T + H+V E + +D L Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDNIVHVAGRIDPL--- 122 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 + ++I+ L ++ D DT R LA + Sbjct: 123 -----EDMDIINL-ELAMADLDTCERAIQRLAKR 150 >gi|6015732|emb|CAB57559.1| gtp-binding protein [Sulfolobus solfataricus P2] gi|13813911|gb|AAK41039.1| GTP binding protein [Sulfolobus solfataricus P2] Length = 408 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI----VKEGYKEF--------- 208 IGIIG N GKSTF A+ T +IA+ PF T+ PN GI VK + EF Sbjct: 11 IGIIGKTNVGKSTFFAAATLKDVEIANRPFVTINPNEGIGYVKVKCAHTEFNVKCNPKNS 70 Query: 209 -----------ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 L D+ G+I AH+G G+G++FL + L+H++ A Sbjct: 71 ICIEDYRFIPVKLVDVAGLIPGAHEGRGLGNKFLDDLRQADALIHVIDA 119 >gi|332161443|ref|YP_004298020.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665673|gb|ADZ42317.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863244|emb|CBX73370.1| GTP-dependent nucleic acid-binding protein engD [Yersinia enterocolitica W22703] Length = 363 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|296418083|ref|XP_002838672.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634631|emb|CAZ82863.1| unnamed protein product [Tuber melanosporum] Length = 367 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 58/95 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKST L+ +T+ K ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 64 ARIALVGFPSVGKSTLLSKITKTKSEVAAYSFTTLTAIPGVLEYGGAEIQILDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + +++ ++ A ++ Q A Sbjct: 124 AAEGKGRGRQVISAAKTSDLIMMVLDATKKAEQRA 158 >gi|330445224|ref|ZP_08308876.1| GTPase of unknown function family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489415|dbj|GAA03373.1| GTPase of unknown function family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 363 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 26/154 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + F+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRMDALAVFVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 DI G++ A +G G+G++FL + T + H+V E + +D L Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDNIVHVAGRIDPL--- 122 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 + ++I+ L ++ D DT R LA + Sbjct: 123 -----EDMDIINL-ELAMADLDTCERAIQRLAKR 150 >gi|325921465|ref|ZP_08183320.1| GTP-binding protein YchF [Xanthomonas gardneri ATCC 19865] gi|325548012|gb|EGD19011.1| GTP-binding protein YchF [Xanthomonas gardneri ATCC 19865] Length = 363 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK------ 206 GI+GLPN GKST ++T+A A++PF T+ PN+GIV E K Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDLRLNQLAEIVKPQKLIP 65 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A G G+G++FL H + H+V E + Sbjct: 66 TAVEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFEND 110 >gi|318605419|emb|CBY26917.1| GTP-binding and nucleic acid-binding protein YchF [Yersinia enterocolitica subsp. palearctica Y11] Length = 363 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|188495527|ref|ZP_03002797.1| GTP-binding protein YchF [Escherichia coli 53638] gi|188490726|gb|EDU65829.1| GTP-binding protein YchF [Escherichia coli 53638] Length = 363 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNIGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|238783260|ref|ZP_04627285.1| GTP-dependent nucleic acid-binding protein engD [Yersinia bercovieri ATCC 43970] gi|238715853|gb|EEQ07840.1| GTP-dependent nucleic acid-binding protein engD [Yersinia bercovieri ATCC 43970] Length = 363 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|308235180|ref|ZP_07665917.1| GTP-dependent nucleic acid-binding protein EngD [Gardnerella vaginalis ATCC 14018] gi|311114589|ref|YP_003985810.1| GTP-binding protein YchF [Gardnerella vaginalis ATCC 14019] gi|310946083|gb|ADP38787.1| GTP-binding protein YchF [Gardnerella vaginalis ATCC 14019] Length = 362 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 IGI+GLPN GKST ++TR +YPF T+ PN GIV K +LA Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDKRLPVLAKLVKTEKIV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A ++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFNDD 110 >gi|167950645|ref|ZP_02537719.1| translation-associated GTPase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 363 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 31/159 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKATIAAENYPFCTIDPNVGVVPLPDPRLDAIAGIVNPQAVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQA 253 +F+ DI G+++ A +G G+G++FL + T + +V E + A Sbjct: 66 TTMQFV--DIAGLVEGASKGEGLGNKFLANIRETDAVAQVVRCFENDDVVHVAGKIDPLA 123 Query: 254 AYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 Q I +EL+ + E +K + Q T D LARK Sbjct: 124 DVQVINNELALADLESVEKALDKTIRQAKTGDKKVLARK 162 >gi|159026846|emb|CAO89097.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 363 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 GI+GLPN GKST F A V AK + A++PF T+ PN+G+V K E I+ Sbjct: 5 GIVGLPNVGKSTLFNALVANAKAEAANFPFCTIEPNVGVVSVPDERLEVLAKISNSEKIV 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + ++H+V + + Sbjct: 65 PTRIEFVDIAGLVKGASRGEGLGNQFLANIREVDAIVHVVRCFDND 110 >gi|147919267|ref|YP_686997.1| translation-associated GTPase [uncultured methanogenic archaeon RC-I] gi|110622393|emb|CAJ37671.1| conserved GTP-binding protein [uncultured methanogenic archaeon RC-I] Length = 397 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 22/106 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI------------------VKE 203 I + G PNAGKS+F S T A +IA+YPFTT+ PN G+ ++ Sbjct: 5 IALAGKPNAGKSSFFKSATLADVEIANYPFTTIKPNHGVSYVRTRCPSVELKVECTKCQD 64 Query: 204 GYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G + FI L D+ G++ +A++G G+G++FL + ++H++ A Sbjct: 65 G-ERFIAVELLDVAGLVPDAYKGKGLGNKFLDDMRQAEAVIHVIDA 109 >gi|238797822|ref|ZP_04641315.1| GTP-dependent nucleic acid-binding protein engD [Yersinia mollaretii ATCC 43969] gi|238718350|gb|EEQ10173.1| GTP-dependent nucleic acid-binding protein engD [Yersinia mollaretii ATCC 43969] Length = 364 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|94312124|ref|YP_585334.1| GTP-dependent nucleic acid-binding protein EngD [Cupriavidus metallidurans CH34] gi|93355976|gb|ABF10065.1| putative GTP-binding protein [Cupriavidus metallidurans CH34] Length = 363 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 32/151 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAKLAEIVKPERILP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 EF+ DI G++ A +G G+G++FL + T + H+V E++ +D LS Sbjct: 66 ATVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVIHVAGKVDPLS 123 Query: 264 ---AYNSELRKKIEIVGLSQIDTVDSDTLAR 291 N+EL L+ + TV+ LAR Sbjct: 124 DIEVINTEL-------ALADLATVEK-ALAR 146 >gi|326922715|ref|XP_003207591.1| PREDICTED: obg-like ATPase 1-like [Meleagris gallopavo] Length = 589 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 34/156 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T+++ ++PF T+ PN V F Sbjct: 93 IGIVGLPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDDRFDFLCQYHKPPSKI 152 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 + DI G++K AH G G+G+ FL H + H++ A E++ + +D + Sbjct: 153 PAFLNVVDIAGLVKGAHTGQGLGNSFLSHINACDGIFHLMRAFEDDDITHVEGSVDPV-- 210 Query: 265 YNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 + IEI+ + L K EL TQC Sbjct: 211 ------RDIEII---------HEELRLKDEELITQC 231 >gi|255745086|ref|ZP_05419035.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholera CIRS 101] gi|255736916|gb|EET92312.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholera CIRS 101] Length = 363 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 31/153 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVKPERILP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ A L+ Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIIHVAGKVSPLE 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++ N EL L+ +D+ + L + K Sbjct: 124 DIEIINLEL-------ALADLDSCERAILRQSK 149 >gi|261855771|ref|YP_003263054.1| GTP-binding protein YchF [Halothiobacillus neapolitanus c2] gi|261836240|gb|ACX96007.1| GTP-binding protein YchF [Halothiobacillus neapolitanus c2] Length = 364 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T+A + +YPF T+ PN+GIV + E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTKANIQAENYPFCTIEPNVGIVAMPDPRLDALAEIVKPERV 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + +V + + Sbjct: 64 LPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETDAIAQVVRCFDND 110 >gi|68467777|ref|XP_722047.1| hypothetical protein CaO19.11460 [Candida albicans SC5314] gi|68468094|ref|XP_721886.1| hypothetical protein CaO19.3977 [Candida albicans SC5314] gi|46443828|gb|EAL03107.1| hypothetical protein CaO19.3977 [Candida albicans SC5314] gi|46443994|gb|EAL03272.1| hypothetical protein CaO19.11460 [Candida albicans SC5314] gi|238882863|gb|EEQ46501.1| GTP-binding protein 1 [Candida albicans WO-1] Length = 369 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 34/87 (39%), Positives = 53/87 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+FL+ VT K + A+Y FTTL GI++ E + D+PGIIK Sbjct: 66 ARVSLIGFPSVGKSSFLSKVTNTKSEAANYEFTTLTSVGGILEYNGAEVQIVDLPGIIKA 125 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 A QG G G + + + + ++L ++ A Sbjct: 126 ASQGKGRGRQVIAVSRTSDLILMVLDA 152 >gi|254381898|ref|ZP_04997261.1| ATP/GTP binding protein [Streptomyces sp. Mg1] gi|194340806|gb|EDX21772.1| ATP/GTP binding protein [Streptomyces sp. Mg1] Length = 362 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 22/110 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA---------- 211 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V G + LA Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVV--GVPDPRLAVLAGIFGSQK 62 Query: 212 ---------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI++ A +G G+G++FL + + + ++ A +ENV Sbjct: 63 VLPATVDFVDIAGIVRGASEGEGLGNKFLANIRESDAICQVIRAFKDENV 112 >gi|71282262|ref|YP_270234.1| GTP-dependent nucleic acid-binding protein EngD [Colwellia psychrerythraea 34H] gi|71148002|gb|AAZ28475.1| GTP-binding protein YchF [Colwellia psychrerythraea 34H] Length = 363 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-----------YKEFILA 211 GI+GLPN GKST ++T+A A++PF T+ PN G+V E +LA Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIDAANFPFCTIEPNTGVVPVPDPRLDKLTAIVKPERVLA 65 Query: 212 ------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQCI-LDEL 262 DI G++ A +G G+G++FL + T + H+V + + + A + +D++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFDNDNIIHVANKVSPVDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS +DT + Sbjct: 126 DVINTEL-------ALSDMDTAE 141 >gi|22126183|ref|NP_669606.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia pestis KIM 10] gi|45441662|ref|NP_993201.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia pestis biovar Microtus str. 91001] gi|51596324|ref|YP_070515.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia pseudotuberculosis IP 32953] gi|108807389|ref|YP_651305.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia pestis Antiqua] gi|108811654|ref|YP_647421.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia pestis Nepal516] gi|145598404|ref|YP_001162480.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia pestis Pestoides F] gi|149366058|ref|ZP_01888093.1| predicted GTP-binding protein [Yersinia pestis CA88-4125] gi|153947042|ref|YP_001401048.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia pseudotuberculosis IP 31758] gi|165926448|ref|ZP_02222280.1| GTP-binding protein YchF [Yersinia pestis biovar Orientalis str. F1991016] gi|165938880|ref|ZP_02227434.1| GTP-binding protein YchF [Yersinia pestis biovar Orientalis str. IP275] gi|166009241|ref|ZP_02230139.1| GTP-binding protein YchF [Yersinia pestis biovar Antiqua str. E1979001] gi|166210536|ref|ZP_02236571.1| GTP-binding protein YchF [Yersinia pestis biovar Antiqua str. B42003004] gi|167401497|ref|ZP_02306994.1| GTP-binding protein YchF [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420347|ref|ZP_02312100.1| GTP-binding protein YchF [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424401|ref|ZP_02316154.1| GTP-binding protein YchF [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170024418|ref|YP_001720923.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia pseudotuberculosis YPIII] gi|186895366|ref|YP_001872478.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia pseudotuberculosis PB1/+] gi|218929121|ref|YP_002346996.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia pestis CO92] gi|229894719|ref|ZP_04509899.1| predicted GTP-binding protein [Yersinia pestis Pestoides A] gi|229897419|ref|ZP_04512575.1| predicted GTP-binding protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898062|ref|ZP_04513213.1| predicted GTP-binding protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901931|ref|ZP_04517052.1| predicted GTP-binding protein [Yersinia pestis Nepal516] gi|270490886|ref|ZP_06207960.1| GTP-binding protein YchF [Yersinia pestis KIM D27] gi|294503918|ref|YP_003567980.1| hypothetical protein YPZ3_1808 [Yersinia pestis Z176003] gi|21959148|gb|AAM85857.1|AE013832_7 putative GTP-binding protein [Yersinia pestis KIM 10] gi|45436524|gb|AAS62078.1| Predicted GTPase [Yersinia pestis biovar Microtus str. 91001] gi|51589606|emb|CAH21236.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP 32953] gi|108775302|gb|ABG17821.1| hypothetical protein YPN_1491 [Yersinia pestis Nepal516] gi|108779302|gb|ABG13360.1| hypothetical protein YPA_1393 [Yersinia pestis Antiqua] gi|115347732|emb|CAL20647.1| conserved hypothetical protein [Yersinia pestis CO92] gi|145210100|gb|ABP39507.1| hypothetical protein YPDSF_1109 [Yersinia pestis Pestoides F] gi|149292471|gb|EDM42545.1| predicted GTP-binding protein [Yersinia pestis CA88-4125] gi|152958537|gb|ABS45998.1| GTP-binding protein YchF [Yersinia pseudotuberculosis IP 31758] gi|165913243|gb|EDR31866.1| GTP-binding protein YchF [Yersinia pestis biovar Orientalis str. IP275] gi|165921669|gb|EDR38866.1| GTP-binding protein YchF [Yersinia pestis biovar Orientalis str. F1991016] gi|165991796|gb|EDR44097.1| GTP-binding protein YchF [Yersinia pestis biovar Antiqua str. E1979001] gi|166207716|gb|EDR52196.1| GTP-binding protein YchF [Yersinia pestis biovar Antiqua str. B42003004] gi|166962042|gb|EDR58063.1| GTP-binding protein YchF [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049193|gb|EDR60601.1| GTP-binding protein YchF [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056283|gb|EDR66052.1| GTP-binding protein YchF [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750952|gb|ACA68470.1| GTP-binding protein YchF [Yersinia pseudotuberculosis YPIII] gi|186698392|gb|ACC89021.1| GTP-binding protein YchF [Yersinia pseudotuberculosis PB1/+] gi|229680827|gb|EEO76922.1| predicted GTP-binding protein [Yersinia pestis Nepal516] gi|229689103|gb|EEO81168.1| predicted GTP-binding protein [Yersinia pestis biovar Orientalis str. India 195] gi|229693756|gb|EEO83805.1| predicted GTP-binding protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229702192|gb|EEO90211.1| predicted GTP-binding protein [Yersinia pestis Pestoides A] gi|262361961|gb|ACY58682.1| hypothetical protein YPD4_1774 [Yersinia pestis D106004] gi|262365900|gb|ACY62457.1| hypothetical protein YPD8_1774 [Yersinia pestis D182038] gi|270339390|gb|EFA50167.1| GTP-binding protein YchF [Yersinia pestis KIM D27] gi|294354377|gb|ADE64718.1| hypothetical protein YPZ3_1808 [Yersinia pestis Z176003] gi|320015314|gb|ADV98885.1| putative GTP-binding protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 363 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|147674921|ref|YP_001217701.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio cholerae O395] gi|161581994|ref|NP_231816.2| GTP-dependent nucleic acid-binding protein EngD [Vibrio cholerae O1 biovar El Tor str. N16961] gi|146316804|gb|ABQ21343.1| GTP-binding protein [Vibrio cholerae O395] gi|327484707|gb|AEA79114.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae LMA3894-4] Length = 363 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 31/153 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVKPERILP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ A L+ Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIIHVAGKVSPLE 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++ N EL L+ +D+ + L + K Sbjct: 124 DIEIINLEL-------ALADLDSCERAILRQSK 149 >gi|325964032|ref|YP_004241938.1| GTP-binding protein YchF [Arthrobacter phenanthrenivorans Sphe3] gi|323470119|gb|ADX73804.1| GTP-binding protein YchF [Arthrobacter phenanthrenivorans Sphe3] Length = 363 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI+GLPN GKST ++TR + A+YPF T+ PN+G+V G + + Sbjct: 7 IGIVGLPNVGKSTLFNALTRNQVLAANYPFATIEPNVGVVNLPDPRLEKLAAIFGSQRVL 66 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI GI+K A +G G+G++FL + + +V ++ Sbjct: 67 PAAVSFVDIAGIVKGASEGEGLGNQFLANIREAEAIAEVVRVFDD 111 >gi|269114830|ref|YP_003302593.1| GTP-binding protein [Mycoplasma hominis] gi|268322455|emb|CAX37190.1| GTP-binding protein [Mycoplasma hominis ATCC 23114] Length = 367 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST +++T + ++A+Y FTT+ PN+ IV K Sbjct: 6 GIVGLPNVGKSTLFSALTLNEAEMANYAFTTIEPNVAIVNLEDPRLYELAKIVQTEKIVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 F DI G++ A +G G+G++FL + ++H++ E Sbjct: 66 ATFQFVDIAGLVAGASKGEGLGNKFLANIREVDAIVHVIRCFE 108 >gi|54310000|ref|YP_131020.1| GTP-dependent nucleic acid-binding protein EngD [Photobacterium profundum SS9] gi|46914439|emb|CAG21218.1| putative GTP-binding protein [Photobacterium profundum SS9] Length = 363 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 27/151 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E++ V A + L+++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDDNIVHVAGKINPLEDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 N EL L+ +DT + + K Sbjct: 126 EVINLEL-------ALADLDTCERAIFRQAK 149 >gi|325108265|ref|YP_004269333.1| GTP-binding protein YchF [Planctomyces brasiliensis DSM 5305] gi|324968533|gb|ADY59311.1| GTP-binding protein YchF [Planctomyces brasiliensis DSM 5305] Length = 363 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFI----------- 209 GI+GLPN GKST ++T A +YPF T+ PN+G+V+ + + I Sbjct: 4 GIVGLPNVGKSTLFNALTAAGIASENYPFCTIEPNVGVVEVPDPRLQIIDSLMPTQKIIP 63 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 L DI GI+K A +G G+G++FL + ++H+V E+ Sbjct: 64 AALKLVDIAGIVKGASEGEGLGNKFLANIRDVDAIVHVVRCFED 107 >gi|145295173|ref|YP_001137994.1| GTP-dependent nucleic acid-binding protein EngD [Corynebacterium glutamicum R] gi|140845093|dbj|BAF54092.1| hypothetical protein [Corynebacterium glutamicum R] Length = 361 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY-KEFIL 210 +GI+GLPN GKST ++TR A+YPF T+ PN+G+V+ E + E IL Sbjct: 5 LGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGLVELPDARLGRLSEIFGSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI+K A +G G+G+ FL + + +V A +ENV Sbjct: 65 PATVSFVDIAGIVKGASEGEGMGNAFLANIREADAICQVVRAFADENV 112 >gi|331694837|ref|YP_004331076.1| GTP-binding protein YchF [Pseudonocardia dioxanivorans CB1190] gi|326949526|gb|AEA23223.1| GTP-binding protein YchF [Pseudonocardia dioxanivorans CB1190] Length = 357 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++TR A+YPF T+ PN+G+V K Sbjct: 5 LGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGVVPLPDPRLDKLAEIHSSAKIV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +GAG+G++FL + + + +V ++ Sbjct: 65 PATVSFVDIAGIVKGASEGAGLGNKFLANIRESDAICQVVRVFSDD 110 >gi|297157564|gb|ADI07276.1| GTP-dependent nucleic acid-binding protein EngD [Streptomyces bingchenggensis BCW-1] Length = 362 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V ++ Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDPRLDTLSEIFGSARKL 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI+K A +G G+G++FL + + + ++ A +ENV Sbjct: 65 PATVDFVDIAGIVKGASEGEGLGNKFLANIRESDAICQVIRAFKDENV 112 >gi|255723349|ref|XP_002546608.1| GTP-binding protein 1 [Candida tropicalis MYA-3404] gi|240130739|gb|EER30302.1| GTP-binding protein 1 [Candida tropicalis MYA-3404] Length = 368 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 34/87 (39%), Positives = 53/87 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+FL+ VT K + A+Y FTTL GI++ E + D+PGIIK Sbjct: 65 ARVSLIGFPSVGKSSFLSKVTNTKSEAANYEFTTLTSVGGILEYNGAEVQIVDLPGIIKA 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 A QG G G + + + + ++L ++ A Sbjct: 125 ASQGKGRGRQVIAVSRTSDLILMVLDA 151 >gi|225630121|ref|YP_002726912.1| GTP-binding protein YchF [Wolbachia sp. wRi] gi|225592102|gb|ACN95121.1| GTP-binding protein YchF [Wolbachia sp. wRi] Length = 364 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 78/143 (54%), Gaps = 22/143 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKST ++T + + A+YPF T+ PN+G + K Sbjct: 4 NCGIVGLPNIGKSTLFNALTESSAAEAANYPFCTIEPNIGKISIKDQRLKQIAAIAGSEK 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 Y + + DI G++K A +G G+G++FL H ++H++ ++ + +D + Sbjct: 64 IIYNQLEVVDIAGLVKGASKGEGLGNKFLSHIREVDAIVHLLRCFTDDDISHVHSKIDPI 123 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 S ++E+ ++E++ L+ ID+++ Sbjct: 124 S--DAEVV-EMELI-LADIDSIE 142 >gi|213615578|ref|ZP_03371404.1| translation-associated GTPase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 173 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|118472879|ref|YP_889468.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium smegmatis str. MC2 155] gi|118174166|gb|ABK75062.1| GTP-binding protein YchF [Mycobacterium smegmatis str. MC2 155] Length = 368 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 ++GI+GLPN GKST ++TR A+YPF T+ PN G+V K Sbjct: 4 NLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNEGVVPLPDPRLDKLAELFGSEKT 63 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +GAG+G++FL + + +V ++ Sbjct: 64 VPAPVTFVDIAGIVKGASEGAGLGNKFLANIRECDAICQVVRVFNDD 110 >gi|162421246|ref|YP_001606886.1| GTP-dependent nucleic acid-binding protein EngD [Yersinia pestis Angola] gi|162354061|gb|ABX88009.1| GTP-binding protein YchF [Yersinia pestis Angola] Length = 363 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|29829749|ref|NP_824383.1| GTP-dependent nucleic acid-binding protein EngD [Streptomyces avermitilis MA-4680] gi|29606858|dbj|BAC70918.1| putative GTP binding protein [Streptomyces avermitilis MA-4680] Length = 362 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 22/110 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA---------- 211 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V G + LA Sbjct: 5 IGIVGLPNVGKSTMFNALTKNDVLAANYPFATIEPNVGVV--GVPDARLAKLAEIFGSQK 62 Query: 212 ---------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI++ A +G G+G++FL + + + ++ A +ENV Sbjct: 63 ILPATVDFVDIAGIVRGASEGEGLGNKFLANIRESDAICQVIRAFHDENV 112 >gi|58616821|ref|YP_196020.1| translation-associated GTPase [Ehrlichia ruminantium str. Gardel] gi|58416433|emb|CAI27546.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel] Length = 363 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 19/117 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLG--IVKEG------------- 204 + GI+GLPN GKST ++T ++A+YPF T+ PN+G +VK+ Sbjct: 4 NCGIVGLPNVGKSTLFNALTCTTVAEVANYPFCTIEPNIGKALVKDDRLKTLAQMASSKK 63 Query: 205 --YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI 258 Y + DI G++ A G G+G++FL H ++H++ ++N+ Q I Sbjct: 64 IIYNQVECVDIAGLVSGASNGEGLGNKFLSHIREVDAIIHVLRCFSDQNISHVNQSI 120 >gi|264680169|ref|YP_003280078.1| GTP-binding protein YchF [Comamonas testosteroni CNB-2] gi|299534008|ref|ZP_07047360.1| GTP-binding protein YchF [Comamonas testosteroni S44] gi|262210684|gb|ACY34782.1| GTP-binding protein YchF [Comamonas testosteroni CNB-2] gi|298717917|gb|EFI58922.1| GTP-binding protein YchF [Comamonas testosteroni S44] Length = 365 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNTGVVEVPDPRLDQLSEVVKPERIVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL H T ++++V E+ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFED 109 >gi|225629780|ref|ZP_03787721.1| GTP-binding protein YchF [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591366|gb|EEH12465.1| GTP-binding protein YchF [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 251 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 18/108 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKST ++T + + A+YPF T+ PN+G + K Sbjct: 4 NCGIVGLPNIGKSTLFNALTESSAAEAANYPFCTIEPNIGKISIKDQRLKQIAAIAGSEK 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y + + DI G++K A +G G+G++FL H ++H++ ++ Sbjct: 64 VIYNQLEVVDIAGLVKGASKGEGLGNKFLSHIREVDAIVHLLRCFTDD 111 >gi|57238832|ref|YP_179968.1| GTP-dependent nucleic acid-binding protein EngD [Ehrlichia ruminantium str. Welgevonden] gi|58578762|ref|YP_196974.1| translation-associated GTPase [Ehrlichia ruminantium str. Welgevonden] gi|57160911|emb|CAH57816.1| conserved hypothetical GTP-binding protein [Ehrlichia ruminantium str. Welgevonden] gi|58417388|emb|CAI26592.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden] Length = 363 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 19/117 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLG--IVKEG------------- 204 + GI+GLPN GKST ++T ++A+YPF T+ PN+G +VK+ Sbjct: 4 NCGIVGLPNVGKSTLFNALTCTTVAEVANYPFCTIEPNIGKALVKDDRLKTLAQMASSKK 63 Query: 205 --YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI 258 Y + DI G++ A G G+G++FL H ++H++ ++N+ Q I Sbjct: 64 IIYNQVECVDIAGLVSGASNGEGLGNKFLSHIREVDAIIHVLRCFSDQNISHVNQSI 120 >gi|166368340|ref|YP_001660613.1| GTP-dependent nucleic acid-binding protein EngD [Microcystis aeruginosa NIES-843] gi|166090713|dbj|BAG05421.1| GTP-binding protein [Microcystis aeruginosa NIES-843] Length = 363 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 GI+GLPN GKST F A V AK + A++PF T+ PN+G+V K E I+ Sbjct: 5 GIVGLPNVGKSTLFNALVANAKAEAANFPFCTIEPNVGVVSVPDERLEVLAKISNSEKIV 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + ++H+V + + Sbjct: 65 PTRIEFVDIAGLVKGASRGEGLGNQFLANIREVDAIVHVVRCFDND 110 >gi|139438186|ref|ZP_01771739.1| Hypothetical protein COLAER_00727 [Collinsella aerofaciens ATCC 25986] gi|133776383|gb|EBA40203.1| Hypothetical protein COLAER_00727 [Collinsella aerofaciens ATCC 25986] Length = 370 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 21/102 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++T+ A+YPF T+ PN+GIV Sbjct: 17 IGIVGLPNVGKSTLFTALTKKTGLAANYPFATIDPNVGIVDVPDSRLQKLADIVNPGRIV 76 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 EF+ DI G++K A++G G+G++FL + T + +V Sbjct: 77 PATVEFV--DIAGLVKGANEGEGLGNQFLANIRETDAICEVV 116 >gi|86136049|ref|ZP_01054628.1| GTP-binding protein YchF [Roseobacter sp. MED193] gi|85826923|gb|EAQ47119.1| GTP-binding protein YchF [Roseobacter sp. MED193] Length = 365 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G V G K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTKTASAQAANFPFCTIEPNVGEVGVPDSRLDKLAAIAGSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + T + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFED 110 >gi|213582443|ref|ZP_03364269.1| translation-associated GTPase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 209 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|198283912|ref|YP_002220233.1| GTP-binding protein YchF [Acidithiobacillus ferrooxidans ATCC 53993] gi|218668057|ref|YP_002426546.1| GTP-binding protein YchF [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248433|gb|ACH84026.1| GTP-binding protein YchF [Acidithiobacillus ferrooxidans ATCC 53993] gi|218520270|gb|ACK80856.1| GTP-binding protein YchF [Acidithiobacillus ferrooxidans ATCC 23270] Length = 363 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+G+V E E + Sbjct: 6 GIVGLPNVGKSTLFNAITKAGIAAENYPFCTIEPNVGLVAVPDPRLEALSEIVKPQKVQH 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++ A QG G+G++FL H T + + E+ Sbjct: 66 ATMEFVDIAGLVAGAAQGEGLGNQFLAHIRETDAIALVTRCFED 109 >gi|262037908|ref|ZP_06011333.1| GTP-binding protein YchF [Leptotrichia goodfellowii F0264] gi|261748051|gb|EEY35465.1| GTP-binding protein YchF [Leptotrichia goodfellowii F0264] Length = 367 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 IGI+GLPN GKST ++T+ + + A+YPF T+ PN+G+V + +E I Sbjct: 4 IGIVGLPNVGKSTLFNAITKTQNAEAANYPFATIEPNIGLVSVPDTRLKELEEIINPQRT 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + +V +++ Sbjct: 64 VGATVEFVDIAGLVKGASKGEGLGNQFLSNIRNTAAICQVVRCFDDD 110 >gi|238755538|ref|ZP_04616876.1| GTP-dependent nucleic acid-binding protein engD [Yersinia ruckeri ATCC 29473] gi|238706218|gb|EEP98597.1| GTP-dependent nucleic acid-binding protein engD [Yersinia ruckeri ATCC 29473] Length = 363 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|153217683|ref|ZP_01951364.1| GTP-binding protein YchF [Vibrio cholerae 1587] gi|124113370|gb|EAY32190.1| GTP-binding protein YchF [Vibrio cholerae 1587] Length = 318 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 31/153 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVKPERILP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ A L+ Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIIHVAGKVSPLE 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++ N EL L+ +D+ + L + K Sbjct: 124 DIEIINLEL-------ALADLDSCERAILRQSK 149 >gi|325914242|ref|ZP_08176592.1| GTP-binding protein YchF [Xanthomonas vesicatoria ATCC 35937] gi|325539497|gb|EGD11143.1| GTP-binding protein YchF [Xanthomonas vesicatoria ATCC 35937] Length = 363 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK------ 206 GI+GLPN GKST ++T+A A++PF T+ PN+GIV E K Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLAEIVKPQKLIP 65 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A G G+G++FL H + H+V E + Sbjct: 66 TAVEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFEND 110 >gi|294678562|ref|YP_003579177.1| GTP-dependent nucleic acid-binding protein EngD [Rhodobacter capsulatus SB 1003] gi|294477382|gb|ADE86770.1| GTP-dependent nucleic acid-binding protein EngD [Rhodobacter capsulatus SB 1003] Length = 365 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G V G K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGEVAVPDPRLDTLAEIAGSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + T + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFED 110 >gi|171462965|ref|YP_001797078.1| GTP-binding protein YchF [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192503|gb|ACB43464.1| GTP-binding protein YchF [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 364 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAALAEIVKSERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++ A +G G+G++FL + T + H+V E+ Sbjct: 66 TAVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFED 109 >gi|225157618|ref|ZP_03725009.1| GTP-binding protein YchF [Opitutaceae bacterium TAV2] gi|224802741|gb|EEG20993.1| GTP-binding protein YchF [Opitutaceae bacterium TAV2] Length = 367 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK-EGYKEFIL---------- 210 GI+GLPN GKST ++TR+ K + A+YPF T+ PN+G+V + ++L Sbjct: 5 GIVGLPNVGKSTLFNALTRSRKAEAANYPFCTIDPNVGVVTVPDERAYVLQKIAKTQVVI 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + ++ +V E++ Sbjct: 65 PAAIEMVDIAGLVKGASKGEGLGNQFLANIREVDAIVQVVRCFEDS 110 >gi|34499510|ref|NP_903725.1| GTP-dependent nucleic acid-binding protein EngD [Chromobacterium violaceum ATCC 12472] gi|34105360|gb|AAQ61715.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 363 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVEVPDHRLGELAKIINPQKIQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL + T ++++V ++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDD 109 >gi|238494364|ref|XP_002378418.1| GTP binding protein (Gtp1), putative [Aspergillus flavus NRRL3357] gi|220695068|gb|EED51411.1| GTP binding protein (Gtp1), putative [Aspergillus flavus NRRL3357] Length = 363 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 2/121 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKSTFL+ +T+ K + A Y FTTL G+++ G E + D+PGII+ Sbjct: 60 ARVALVGFPSVGKSTFLSKITKTKSEAAAYSFTTLTAIPGVLEYGGAEIQILDLPGIIEG 119 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A +G G G + + + + ++L ++ A + Q A + EL A L K+ + L Sbjct: 120 AAEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA--LLEAELDAVGIRLNKEPPNIYLK 177 Query: 280 Q 280 Q Sbjct: 178 Q 178 >gi|294666033|ref|ZP_06731295.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604225|gb|EFF47614.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 363 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A A++PF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLADIVKPQKLIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A G G+G++FL H + H+V E + Sbjct: 66 TAVEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFEND 110 >gi|83943892|ref|ZP_00956349.1| GTP-binding protein YchF [Sulfitobacter sp. EE-36] gi|83845139|gb|EAP83019.1| GTP-binding protein YchF [Sulfitobacter sp. EE-36] Length = 365 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G V G K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGEVAVPDSRLDKLAAIAGSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + T + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFED 110 >gi|302536640|ref|ZP_07288982.1| translation-associated GTPase [Streptomyces sp. C] gi|302445535|gb|EFL17351.1| translation-associated GTPase [Streptomyces sp. C] Length = 362 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V G ++ + Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDPRLGVLAGIFGSQKVL 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 A DI GI++ A +G G+G++FL + + + ++ A +ENV Sbjct: 65 PATVDFVDIAGIVRGASEGEGLGNKFLANIRESDAICQVIRAFKDENV 112 >gi|253990021|ref|YP_003041377.1| GTP-dependent nucleic acid-binding protein EngD [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781471|emb|CAQ84634.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 363 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 17/102 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V E E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLEQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 DI G++K A +G G+G++FL + T + H+V Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCF 107 >gi|294659975|ref|XP_462431.2| DEHA2G20438p [Debaryomyces hansenii CBS767] gi|199434375|emb|CAG90941.2| DEHA2G20438p [Debaryomyces hansenii] Length = 368 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 53/87 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+FL+ VT K + A+Y FTTL GI++ E + D+PGIIK Sbjct: 65 ARVSLIGFPSVGKSSFLSKVTNTKSEAANYEFTTLTSVGGILEYNGAEVQIVDLPGIIKA 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 A QG G G + + + + +++ ++ A Sbjct: 125 ASQGKGRGRQVIAVSRTSDLIMMVLDA 151 >gi|297621086|ref|YP_003709223.1| translation-associated GTPase [Waddlia chondrophila WSU 86-1044] gi|297376387|gb|ADI38217.1| translation-associated GTPase [Waddlia chondrophila WSU 86-1044] Length = 365 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKS+ ++T + +++PF T+ PN+GIV K + Sbjct: 8 GIVGLPNVGKSSLFNALTANEAPSSNFPFCTIDPNVGIVEVYDNRLEELAKISKSGKTIH 67 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI++ A +G G+G++FL + T +LH+V +++ Sbjct: 68 AAMQFVDIAGIVEGASKGEGLGNKFLANIRETDAILHVVRCFDDS 112 >gi|226290573|gb|EEH46057.1| GTP-binding protein [Paracoccidioides brasiliensis Pb18] Length = 368 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 57/95 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKST L+ +T+ K ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 65 ARISLVGFPSVGKSTLLSKITKTKSEVAAYSFTTLTAIPGVLEYGGAEIQILDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + +++ I+ A + Q A Sbjct: 125 AAEGKGRGRQVISAAKTSDLIMMILDATKRAEQRA 159 >gi|195952890|ref|YP_002121180.1| GTP-dependent nucleic acid-binding protein EngD [Hydrogenobaculum sp. Y04AAS1] gi|195932502|gb|ACG57202.1| GTP-binding protein YchF [Hydrogenobaculum sp. Y04AAS1] Length = 368 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 23/110 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST F A + AK + A+YPF T+ PN+G V+ Sbjct: 6 GIVGLPNVGKSTLFNALIKAAKAQAANYPFCTIEPNIGTVEVPDERLYEIARLENSAKVV 65 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 + EF+ DI G+++ A +G G+G++FL H ++ +V E EN+ Sbjct: 66 PTFIEFV--DIAGLVRGASKGEGLGNQFLSHIRNVDAIVQVVRCFEDENI 113 >gi|167470770|ref|ZP_02335474.1| GTP-binding protein YchF [Yersinia pestis FV-1] Length = 315 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++K A +G G+G++FL + T + H+V E + + A + D++ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVDPADDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS ++T + Sbjct: 126 ETINTEL-------ALSDLETCE 141 >gi|167043323|gb|ABZ08027.1| hypothetical protein ALOHA_HF4000ANIW141N1ctg1g1 [uncultured marine crenarchaeote HF4000_ANIW141N1] Length = 239 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 22/105 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------EGYK-------- 206 IG+ G N GKSTF ++ T+ KI ++PFTT+ PN+GI + +K Sbjct: 33 IGLFGKANVGKSTFFSAATQTSVKIENFPFTTIKPNVGIAYVNTTCACKHFKIEHSNPLC 92 Query: 207 ----EFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 FI L D+ G++ AH+G G+G++FL + VL+H+V Sbjct: 93 MSGIRFIPVKLIDVAGLVPGAHEGKGLGNQFLDDARQAEVLIHVV 137 >gi|295674785|ref|XP_002797938.1| GTP-binding protein [Paracoccidioides brasiliensis Pb01] gi|226280588|gb|EEH36154.1| GTP-binding protein [Paracoccidioides brasiliensis Pb01] Length = 361 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 57/95 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKST L+ +T+ K ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 58 ARISLVGFPSVGKSTLLSKITKTKSEVAAYSFTTLTAIPGVLEYGGAEIQILDLPGIIEG 117 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + +++ I+ A + Q A Sbjct: 118 AAEGKGRGRQVISAAKTSDLIMMILDATKRAEQRA 152 >gi|83953532|ref|ZP_00962254.1| GTP-binding protein YchF [Sulfitobacter sp. NAS-14.1] gi|83842500|gb|EAP81668.1| GTP-binding protein YchF [Sulfitobacter sp. NAS-14.1] Length = 368 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G V G K+ Sbjct: 8 MGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGEVAVPDSRLDKLAAIAGSKQI 67 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + T + H++ E+ Sbjct: 68 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFED 113 >gi|269795921|ref|YP_003315376.1| GTP-binding protein YchF [Sanguibacter keddieii DSM 10542] gi|269098106|gb|ACZ22542.1| GTP-binding protein YchF [Sanguibacter keddieii DSM 10542] Length = 361 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGY-KEFIL 210 IGI GLPN GKST ++TRA+ A+YPF T+ PN+G+V E + E IL Sbjct: 5 IGIAGLPNVGKSTLFNALTRAQVLAANYPFATIEPNVGVVPLPDARLGKLAEVFGSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI++ A +G G+G++FL + + + A + Sbjct: 65 PATVSFVDIAGIVRGASEGEGLGNKFLANIREAEAICQVTRAFAD 109 >gi|254437229|ref|ZP_05050723.1| GTP-binding protein YchF [Octadecabacter antarcticus 307] gi|198252675|gb|EDY76989.1| GTP-binding protein YchF [Octadecabacter antarcticus 307] Length = 365 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+G+PN GKST ++TR A + A++PF T+ PN+G V G K Sbjct: 5 MGIVGMPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDKRLDKLAAIAGSKSI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + T + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFED 110 >gi|83771821|dbj|BAE61951.1| unnamed protein product [Aspergillus oryzae] Length = 362 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 57/95 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKSTFL+ +T+ K + A Y FTTL G+++ G E + D+PGII+ Sbjct: 59 ARVALVGFPSVGKSTFLSKITKTKSEAAAYSFTTLTAIPGVLEYGGAEIQILDLPGIIEG 118 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 119 AAEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA 153 >gi|78046539|ref|YP_362714.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034969|emb|CAJ22614.1| GTP-binding protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 363 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A A++PF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLADIVKPQKLIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A G G+G++FL H + H+V E + Sbjct: 66 TAVEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFEND 110 >gi|317149036|ref|XP_001823084.2| GTP-binding protein RBG1 [Aspergillus oryzae RIB40] Length = 367 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 57/95 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKSTFL+ +T+ K + A Y FTTL G+++ G E + D+PGII+ Sbjct: 64 ARVALVGFPSVGKSTFLSKITKTKSEAAAYSFTTLTAIPGVLEYGGAEIQILDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 124 AAEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA 158 >gi|28199875|ref|NP_780189.1| translation-associated GTPase [Xylella fastidiosa Temecula1] gi|182682627|ref|YP_001830787.1| GTP-dependent nucleic acid-binding protein EngD [Xylella fastidiosa M23] gi|28057996|gb|AAO29838.1| GTP-binding protein [Xylella fastidiosa Temecula1] gi|182632737|gb|ACB93513.1| GTP-binding protein YchF [Xylella fastidiosa M23] Length = 363 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 21/105 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK------ 206 GI+GLPN GKST ++T+A A++PF T+ PN+G+V E K Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVSVPDPRLNQLAEIVKPQKLLP 65 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 EF+ DI G++ A G G+G++FL H + H+V E Sbjct: 66 TVIEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAIAHVVRCFE 108 >gi|294627826|ref|ZP_06706405.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292597740|gb|EFF41898.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 363 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A A++PF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLADIVKPQKLIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A G G+G++FL H + H+V E + Sbjct: 66 TAVEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFEND 110 >gi|163839905|ref|YP_001624310.1| GTP-dependent nucleic acid-binding protein EngD [Renibacterium salmoninarum ATCC 33209] gi|162953381|gb|ABY22896.1| GTP-binding protein [Renibacterium salmoninarum ATCC 33209] Length = 425 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 18/118 (15%) Query: 150 KIIWLKLKLIA-DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE----- 203 +I+ L L +A IGI+GLPN GKST ++TR A+YPF T+ PN+G+V Sbjct: 56 RILPLNLVPVALTIGIVGLPNVGKSTLFNALTRNNVLAANYPFATIEPNVGVVNLPDARL 115 Query: 204 -------GYKEFILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 G + A DI GI+K A +G G+G++FL + + ++ ++ Sbjct: 116 AKLAEVFGSARILPAVVSFVDIAGIVKGASEGEGLGNKFLANIREAEAIAQVIRVFDD 173 >gi|159185112|ref|NP_355190.2| translation-associated GTPase [Agrobacterium tumefaciens str. C58] gi|159140383|gb|AAK87975.2| GTP-binding protein [Agrobacterium tumefaciens str. C58] Length = 367 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMQQLAAIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAVVHVLRCFEDD 111 >gi|21241722|ref|NP_641304.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas axonopodis pv. citri str. 306] gi|21107091|gb|AAM35840.1| GTP-binding protein [Xanthomonas axonopodis pv. citri str. 306] Length = 363 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A A++PF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLADIVKPQKLIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A G G+G++FL H + H+V E + Sbjct: 66 TAVEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFEND 110 >gi|18976746|ref|NP_578103.1| translation-associated GTPase [Pyrococcus furiosus DSM 3638] gi|18892333|gb|AAL80498.1| GTP-binding protein [Pyrococcus furiosus DSM 3638] Length = 397 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 24/110 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV--------KE--------- 203 +IG++G PN GKSTF ++ T +IA+YPFTT+ N+G+ KE Sbjct: 2 EIGVVGKPNVGKSTFFSAATLVDVEIANYPFTTINANVGVTYAITEHPCKELGCTPNPQN 61 Query: 204 -GYKEFI------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 Y+E + + D+ G++ AH+G G+G++FL L+H++ A Sbjct: 62 YEYREGLALIPVKMIDVAGLVPGAHEGRGLGNKFLDDLRMASALIHVIDA 111 >gi|37525971|ref|NP_929315.1| translation-associated GTPase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785400|emb|CAE14347.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 363 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 17/102 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V E E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLEQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 DI G++K A +G G+G++FL + T + H+V Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCF 107 >gi|308813029|ref|XP_003083821.1| GTP-binding protein (ISS) [Ostreococcus tauri] gi|116055703|emb|CAL57788.1| GTP-binding protein (ISS) [Ostreococcus tauri] Length = 817 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 25/164 (15%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI----- 209 ++ ++GI+G+PN GKST ++T ++PF T+ PN + + E + + Sbjct: 441 ILREVGIVGMPNVGKSTLYNALTNCAIPAENFPFCTIEPNSTRVNVPDERFDWLVDMHKP 500 Query: 210 ---------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQ 256 + DI G++K A GAG+G+ FL H + +LH++ E+ +V+ Sbjct: 501 KSVVQPFLEIVDIAGLVKGAADGAGLGNAFLSHIKAVDGILHVMRCFEDPDVIHVEDRVD 560 Query: 257 CILDELSAYNSELRKKIEIVGLSQI-DTVDSDTLARKKNELATQ 299 + D++ SELR+K +I +S + D ++ D R N +A + Sbjct: 561 PV-DDIEIITSELRQK-DIEFMSNLKDKIEKDK-TRASNPIAAK 601 >gi|225678370|gb|EEH16654.1| GTP-binding protein [Paracoccidioides brasiliensis Pb03] Length = 363 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 57/95 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKST L+ +T+ K ++A Y FTTL G+++ G E + D+PGII+ Sbjct: 60 ARISLVGFPSVGKSTLLSKITKTKSEVAAYSFTTLTAIPGVLEYGGAEIQILDLPGIIEG 119 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + +++ I+ A + Q A Sbjct: 120 AAEGKGRGRQVISAAKTSDLIMMILDATKRAEQRA 154 >gi|254460396|ref|ZP_05073812.1| GTP-binding protein YchF [Rhodobacterales bacterium HTCC2083] gi|206676985|gb|EDZ41472.1| GTP-binding protein YchF [Rhodobacteraceae bacterium HTCC2083] Length = 384 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G V G K+ Sbjct: 24 MGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGDVAVPDARLDTLADIAGSKQI 83 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + T + H++ E+ Sbjct: 84 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFED 129 >gi|289663464|ref|ZP_06485045.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 363 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A A++PF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLADIVKPQKLIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A G G+G++FL H + H+V E + Sbjct: 66 TAVEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFEND 110 >gi|298345915|ref|YP_003718602.1| GTP-binding protein [Mobiluncus curtisii ATCC 43063] gi|298235976|gb|ADI67108.1| GTP-binding protein [Mobiluncus curtisii ATCC 43063] Length = 361 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI GLPN GKST ++TRA A+YPF T+ PN+G+V K Sbjct: 5 IGIAGLPNVGKSTIFNALTRANVLAANYPFATIDPNVGVVPLPDPRLQVLSDMFQSEKIV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI+K A QG G+G++FL + + + A + Sbjct: 65 PATVSFVDIAGIVKGASQGEGLGNKFLANIREADAICQVTRAFTD 109 >gi|77359994|ref|YP_339569.1| translation-associated GTPase [Pseudoalteromonas haloplanktis TAC125] gi|76874905|emb|CAI86126.1| GTP-dependent nucleic acid-binding protein engD [Pseudoalteromonas haloplanktis TAC125] Length = 363 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 24/129 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAKIVNPQRILT 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LD 260 EF+ DI G++K A +G G+G++FL + T + H+V ++N+ I D Sbjct: 66 TSMEFV--DIAGLVKGASKGEGLGNQFLANIRETDAIGHVVRCFNDDNIIHVAGTIDPAD 123 Query: 261 ELSAYNSEL 269 ++ N+EL Sbjct: 124 DIDVINTEL 132 >gi|119715319|ref|YP_922284.1| GTP-dependent nucleic acid-binding protein EngD [Nocardioides sp. JS614] gi|119535980|gb|ABL80597.1| GTP-binding protein YchF [Nocardioides sp. JS614] Length = 359 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 21/101 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------K 202 IGI+GLPNAGKST ++T+ A+YPF T+ PN+G+V Sbjct: 5 IGIVGLPNAGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDDRLPKLAHVFGSARIL 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHI 243 EF+ DI GI++ A +G G+G++FL H + + + Sbjct: 65 PATVEFV--DIAGIVRGASEGEGLGNKFLSHIRESAAICQV 103 >gi|315654503|ref|ZP_07907409.1| GTP-dependent nucleic acid-binding protein EngD [Mobiluncus curtisii ATCC 51333] gi|315490967|gb|EFU80586.1| GTP-dependent nucleic acid-binding protein EngD [Mobiluncus curtisii ATCC 51333] Length = 361 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 17/103 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI GLPN GKST ++TRA A+YPF T+ PN+G+V K Sbjct: 5 IGIAGLPNVGKSTIFNALTRANVLAANYPFATIDPNVGVVPLPDPRLQVLSDMFQSEKIV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 DI GI+K A QG G+G++FL + + + A Sbjct: 65 PATVSFVDIAGIVKGASQGEGLGNKFLANIREADAICQVTRAF 107 >gi|254413674|ref|ZP_05027444.1| GTP-binding protein YchF [Microcoleus chthonoplastes PCC 7420] gi|196179781|gb|EDX74775.1| GTP-binding protein YchF [Microcoleus chthonoplastes PCC 7420] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 19/108 (17%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 GI+GLPN GKST F A V AK A++PF T+ PN+G+V K E I+ Sbjct: 5 GIVGLPNVGKSTLFNALVANAKADAANFPFCTIEPNVGVVAVPDERLSVLAKISTSEQIV 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI G++K A +G G+G++FL + ++H+V +EN+ Sbjct: 65 PTRIEFVDIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFDDENI 112 >gi|118497596|ref|YP_898646.1| translation-associated GTPase [Francisella tularensis subsp. novicida U112] gi|195536296|ref|ZP_03079303.1| GTP-binding protein YchF [Francisella tularensis subsp. novicida FTE] gi|118423502|gb|ABK89892.1| GTP-binding protein [Francisella novicida U112] gi|194372773|gb|EDX27484.1| GTP-binding protein YchF [Francisella tularensis subsp. novicida FTE] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T A +YPF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTEAGIDAENYPFCTIDPNIGIVSVPDQRLNELAKIVKPERIIT 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDD 110 >gi|312795910|ref|YP_004028832.1| GTP-binding protein, translation factor [Burkholderia rhizoxinica HKI 454] gi|312167685|emb|CBW74688.1| GTP-binding protein, probable translation factor [Burkholderia rhizoxinica HKI 454] Length = 364 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDSRLDALAQIVKPERVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V +++ Sbjct: 66 AVVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFDDD 110 >gi|297624770|ref|YP_003706204.1| GTP-binding protein YchF [Truepera radiovictrix DSM 17093] gi|297165950|gb|ADI15661.1| GTP-binding protein YchF [Truepera radiovictrix DSM 17093] Length = 361 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 25/111 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 IGI+GLPN GKST ++T+A A+YPF T+ N+G+V ++ Y Sbjct: 4 IGIVGLPNVGKSTLFNAITKAGALAANYPFATIDKNVGVVAVPDERLAALRDLYTKGERV 63 Query: 207 --------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A QG G+G++FL + + H+V ++ Sbjct: 64 PPVVPTTVEFV--DIAGLVKGASQGEGLGNQFLANIREVSAIAHVVRCFDD 112 >gi|319945390|ref|ZP_08019651.1| GTP-dependent nucleic acid-binding protein EngD [Lautropia mirabilis ATCC 51599] gi|319741383|gb|EFV93809.1| GTP-dependent nucleic acid-binding protein EngD [Lautropia mirabilis ATCC 51599] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T+A + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNVGIVEVPDPRLAKLAEIVQPQKIQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL + T ++++V ++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDD 109 >gi|289667605|ref|ZP_06488680.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A A++PF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLADIVKPQKLIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A G G+G++FL H + H+V E + Sbjct: 66 TAVEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFEND 110 >gi|332701995|ref|ZP_08422083.1| GTP-binding protein YchF [Desulfovibrio africanus str. Walvis Bay] gi|332552144|gb|EGJ49188.1| GTP-binding protein YchF [Desulfovibrio africanus str. Walvis Bay] Length = 366 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 18/105 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-----------------KE 203 IGI+GLPN GKST ++T+A+ + A+YPF T+ PN +V K Sbjct: 5 IGIVGLPNVGKSTLFNALTKAQNAECANYPFCTIEPNKAVVPVPDERLNALAKLVKPQKV 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++K A +G G+G++FL + +LH+V + Sbjct: 65 VHATVDFVDIAGLVKGASKGEGLGNKFLANIREGQAILHVVRCFD 109 >gi|325928011|ref|ZP_08189229.1| GTP-binding protein YchF [Xanthomonas perforans 91-118] gi|325541625|gb|EGD13149.1| GTP-binding protein YchF [Xanthomonas perforans 91-118] Length = 383 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A A++PF T+ PN+GIV Sbjct: 26 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLADIVKPQKLIP 85 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A G G+G++FL H + H+V E + Sbjct: 86 TAVEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFEND 130 >gi|319760476|ref|YP_004124414.1| GTP-dependent nucleic acid-binding protein engD [Candidatus Blochmannia vafer str. BVAF] gi|318039190|gb|ADV33740.1| GTP-dependent nucleic acid-binding protein engD [Candidatus Blochmannia vafer str. BVAF] Length = 356 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------------EGYK 206 GIIGLPN GKST +T+ KIA++PF T+ PN+ +VK + Sbjct: 6 GIIGLPNVGKSTLFKVLTKIPVKIANFPFCTIQPNIAVVKIPEFRLYELNRIVHTHKIVH 65 Query: 207 EFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 E I D+ G+I+ A G G+G L H + + H++ +++ Sbjct: 66 EIIEFTDVAGLIEGAAHGIGLGPNILNHVQFIKIFCHVIRCFDDD 110 >gi|298372645|ref|ZP_06982635.1| GTP-binding protein YchF [Bacteroidetes oral taxon 274 str. F0058] gi|298275549|gb|EFI17100.1| GTP-binding protein YchF [Bacteroidetes oral taxon 274 str. F0058] Length = 367 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++ F T+ PN+G++ + E Sbjct: 6 GIVGLPNVGKSTLFNCLSNAKAQAANFAFCTIEPNVGVITVPDERLDKLAEICRPQRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T ++H++ +++ Sbjct: 66 TTVEIVDIAGLVKGASKGEGLGNKFLSNIRETDAIIHVLRCFDDD 110 >gi|294788982|ref|ZP_06754222.1| GTP-binding protein YchF [Simonsiella muelleri ATCC 29453] gi|294483084|gb|EFG30771.1| GTP-binding protein YchF [Simonsiella muelleri ATCC 29453] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTKSGIEAANYPFCTIEPNVGIVEVPDPRMDELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|237747437|ref|ZP_04577917.1| GTP-dependent nucleic acid-binding protein EngD [Oxalobacter formigenes HOxBLS] gi|229378788|gb|EEO28879.1| GTP-dependent nucleic acid-binding protein EngD [Oxalobacter formigenes HOxBLS] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGIVEVPDPRLNELAAIVKPERILP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL H T ++ +V + + Sbjct: 66 AVVEFV--DIAGLVAGASKGEGLGNQFLAHIRETDAIVQVVRCFQND 110 >gi|110004190|emb|CAK98528.1| gtp-dependent nucleic acid-binding protein [Spiroplasma citri] Length = 366 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 17/104 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST S+T ++ + A+YPF T+ PN+G V K Sbjct: 5 MGIVGLPNVGKSTLFNSITNSQVEAANYPFATINPNVGTVAVPDERMDTLIALCAPDKAI 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + F DI G+I A +G G+G+ FL++ T + ++ + Sbjct: 65 HSTFEFYDIAGLIAGASKGEGLGNAFLQNIRETDAISMVIRCFD 108 >gi|108801066|ref|YP_641263.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium sp. MCS] gi|119870208|ref|YP_940160.1| translation-associated GTPase [Mycobacterium sp. KMS] gi|108771485|gb|ABG10207.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696297|gb|ABL93370.1| GTP-binding protein YchF [Mycobacterium sp. KMS] Length = 376 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFI 209 ++GI+GLPN GKST ++TR A+YPF T+ PN G+V K + E I Sbjct: 15 NLGIVGLPNVGKSTLFNALTRNNVLAANYPFATIEPNEGVVALPDPRLEALAKIFHSEKI 74 Query: 210 L------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI GI+K A +GAG+G++FL + + +V ++ Sbjct: 75 VPAPVTFVDIAGIVKGASEGAGLGNKFLANIRECDAICQVVRVFADD 121 >gi|78484740|ref|YP_390665.1| translation-associated GTPase [Thiomicrospira crunogena XCL-2] gi|78363026|gb|ABB40991.1| GTP-binding protein, HSR1-related [Thiomicrospira crunogena XCL-2] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------KEGYKEFI------- 209 GI+GLPN GKST ++T A + A+YPF T+ PN+G+V ++ + + Sbjct: 6 GIVGLPNVGKSTLFNALTNAGIESANYPFCTIEPNVGVVPVPDPREQALADIVKPERILS 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + T ++ +V E + Sbjct: 66 ATVDFMDIAGLVEGASKGEGLGNKFLANIRETDAIVQVVRCFEND 110 >gi|38233544|ref|NP_939311.1| translation-associated GTPase [Corynebacterium diphtheriae NCTC 13129] gi|38199804|emb|CAE49467.1| Putative ABC transport system ATP-binding protein [Corynebacterium diphtheriae] Length = 361 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK-EFIL 210 +GI+GLPN GKST ++TR A+YPF T+ PN+G+V+ E ++ E IL Sbjct: 5 LGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGLVELPDARLNRLAEIFQSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G+ FL + + +V A ++ Sbjct: 65 PATVSFVDIAGIVKGASEGEGMGNAFLANIREADAICQVVRAFADD 110 >gi|87124842|ref|ZP_01080690.1| hypothetical protein RS9917_01432 [Synechococcus sp. RS9917] gi|86167721|gb|EAQ68980.1| hypothetical protein RS9917_01432 [Synechococcus sp. RS9917] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V A+ + A++PF T+ PN+G V G KE I Sbjct: 5 GIVGLPNVGKSTLFNALVANAQAQAANFPFCTIEPNVGTVAVPDPRLQQLSDLSGSKELI 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI G++K A QG G+G++FL + ++H+V E++ Sbjct: 65 PARIEFVDIAGLVKGASQGEGLGNKFLANIREVDAIVHVVRCFEDD 110 >gi|282865354|ref|ZP_06274406.1| GTP-binding protein YchF [Streptomyces sp. ACTE] gi|282559827|gb|EFB65377.1| GTP-binding protein YchF [Streptomyces sp. ACTE] Length = 362 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V G + + Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDPRLDKLAAIFGSQRIL 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 A DI GI++ A +G G+G++FL + + + ++ A +ENV Sbjct: 65 PATVDFVDIAGIVRGASEGEGLGNKFLANIRESDAICQVIRAFKDENV 112 >gi|300781578|ref|ZP_07091432.1| GTP-binding protein YchF [Corynebacterium genitalium ATCC 33030] gi|300533285|gb|EFK54346.1| GTP-binding protein YchF [Corynebacterium genitalium ATCC 33030] Length = 365 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-----------IL 210 +GI+GLPN GKST ++TR + A+YPF T+ PN+G+V K IL Sbjct: 8 LGIVGLPNVGKSTLFNALTRNEVLAANYPFATIEPNVGLVPLPDKRLDRLAEIFESAEIL 67 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G+ FL + + +V A ++ Sbjct: 68 PATVSFVDIAGIVKGASEGEGMGNAFLANIREADAICQVVRAFSDD 113 >gi|153008959|ref|YP_001370174.1| GTP-dependent nucleic acid-binding protein EngD [Ochrobactrum anthropi ATCC 49188] gi|151560847|gb|ABS14345.1| GTP-binding protein YchF [Ochrobactrum anthropi ATCC 49188] Length = 367 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRQNDIARIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRINFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDD 111 >gi|330835845|ref|YP_004410573.1| translation-associated GTPase [Metallosphaera cuprina Ar-4] gi|329567984|gb|AEB96089.1| translation-associated GTPase [Metallosphaera cuprina Ar-4] Length = 400 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV---KE--------------- 203 IG+IG N GKSTF +S T +I++ PF T+ PN+G+ KE Sbjct: 4 IGLIGKTNVGKSTFFSSATLIDVEISNRPFVTIEPNVGVAYVRKECAHTKLGVRCNPRNS 63 Query: 204 ---GYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G FI L D+ G+I AH+G G+G++FL + VL+H+V A Sbjct: 64 ICIGDYRFIPVKLVDVAGLIPGAHEGKGLGNKFLDDLRKADVLIHVVDA 112 >gi|315606062|ref|ZP_07881093.1| GTP-dependent nucleic acid-binding protein EngD [Actinomyces sp. oral taxon 180 str. F0310] gi|315312344|gb|EFU60430.1| GTP-dependent nucleic acid-binding protein EngD [Actinomyces sp. oral taxon 180 str. F0310] Length = 366 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI GLPN GKST ++TRA A+YPF T+ PN+G+V G + I Sbjct: 5 IGIAGLPNVGKSTLFNALTRASVLAANYPFATIEPNVGVVPLPDPRLEKLAEIFGSQRII 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI GI++ A +G G+G++FL + + + A + Sbjct: 65 PATVSFVDIAGIVRGASEGEGLGNQFLANIREADAICQVTRAFSD 109 >gi|291543763|emb|CBL16872.1| GTP-binding protein YchF [Ruminococcus sp. 18P13] Length = 364 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 21/106 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 +G++GLPN GKST ++T A + A+YPF T+ N+GIV E Y Sbjct: 3 LGMVGLPNVGKSTLFNALTNAGAESANYPFCTIEKNVGIVSVPDERLDKLAEMYHPEKFT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 EF+ DI G++K A +G G+G++FL ++H+V E Sbjct: 63 PATLEFV--DIAGLVKGASKGEGLGNKFLADIREVDAIVHVVRCFE 106 >gi|148559973|ref|YP_001259414.1| GTP-dependent nucleic acid-binding protein EngD [Brucella ovis ATCC 25840] gi|148371230|gb|ABQ61209.1| putative GTP-binding protein [Brucella ovis ATCC 25840] Length = 367 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRQNEIARIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRINFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDD 111 >gi|126436904|ref|YP_001072595.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium sp. JLS] gi|126236704|gb|ABO00105.1| GTP-binding protein YchF [Mycobacterium sp. JLS] Length = 376 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFI 209 ++GI+GLPN GKST ++TR A+YPF T+ PN G+V K + E I Sbjct: 15 NLGIVGLPNVGKSTLFNALTRNNVLAANYPFATIEPNEGVVALPDPRLEALAKIFHSEKI 74 Query: 210 L------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI GI+K A +GAG+G++FL + + +V ++ Sbjct: 75 VPAPVTFVDIAGIVKGASEGAGLGNKFLANIRECDAICQVVRVFADD 121 >gi|227082310|ref|YP_002810861.1| GTP-binding protein [Vibrio cholerae M66-2] gi|229507737|ref|ZP_04397242.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae BX 330286] gi|229512027|ref|ZP_04401506.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae B33] gi|229513831|ref|ZP_04403293.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae TMA 21] gi|229519163|ref|ZP_04408606.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae RC9] gi|229522136|ref|ZP_04411553.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae TM 11079-80] gi|229528808|ref|ZP_04418198.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae 12129(1)] gi|229607282|ref|YP_002877930.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio cholerae MJ-1236] gi|254849264|ref|ZP_05238614.1| GTP-binding protein [Vibrio cholerae MO10] gi|298497800|ref|ZP_07007607.1| GTP-binding protein YchF [Vibrio cholerae MAK 757] gi|9656740|gb|AAF95330.1| GTP-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|227010198|gb|ACP06410.1| GTP-binding protein [Vibrio cholerae M66-2] gi|227014081|gb|ACP10291.1| GTP-binding protein [Vibrio cholerae O395] gi|229332582|gb|EEN98068.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae 12129(1)] gi|229341061|gb|EEO06066.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae TM 11079-80] gi|229343852|gb|EEO08827.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae RC9] gi|229349012|gb|EEO13969.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae TMA 21] gi|229351992|gb|EEO16933.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae B33] gi|229355242|gb|EEO20163.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae BX 330286] gi|229369937|gb|ACQ60360.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae MJ-1236] gi|254844969|gb|EET23383.1| GTP-binding protein [Vibrio cholerae MO10] gi|297542133|gb|EFH78183.1| GTP-binding protein YchF [Vibrio cholerae MAK 757] Length = 383 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 31/153 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 26 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVKPERILP 85 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ A L+ Sbjct: 86 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIIHVAGKVSPLE 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++ N EL L+ +D+ + L + K Sbjct: 144 DIEIINLEL-------ALADLDSCERAILRQSK 169 >gi|325266751|ref|ZP_08133425.1| GTP-dependent nucleic acid-binding protein EngD [Kingella denitrificans ATCC 33394] gi|324981799|gb|EGC17437.1| GTP-dependent nucleic acid-binding protein EngD [Kingella denitrificans ATCC 33394] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTKSGIEAANYPFCTIEPNVGIVEVPDPRMDELAKIVNPQRMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|297626862|ref|YP_003688625.1| GTPase YchF [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922627|emb|CBL57204.1| GTPase YchF [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 17/99 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI+GLPNAGKST ++TR A+YPF T+ PN+G+V K Sbjct: 5 IGIVGLPNAGKSTLFNALTRNDALAANYPFATIEPNVGVVGVPDRRLDVLGKMFDSAKLV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHI 243 DI GI+K A QG G+G+ FL + + + Sbjct: 65 PATVTFVDIAGIVKGASQGEGMGNAFLANIREADAICQV 103 >gi|229524181|ref|ZP_04413586.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae bv. albensis VL426] gi|229337762|gb|EEO02779.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio cholerae bv. albensis VL426] Length = 383 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 31/153 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 26 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVKPERILP 85 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ A L+ Sbjct: 86 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIIHVAGKVSPLE 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++ N EL L+ +D+ + L + K Sbjct: 144 DIEIINLEL-------ALADLDSCERAILRQSK 169 >gi|254292271|ref|ZP_04963023.1| GTP-binding protein [Vibrio cholerae AM-19226] gi|150421814|gb|EDN13809.1| GTP-binding protein [Vibrio cholerae AM-19226] Length = 383 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 31/153 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 26 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVKPERILP 85 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ A L+ Sbjct: 86 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIIHVAGKVSPLE 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++ N EL L+ +D+ + L + K Sbjct: 144 DIEIINLEL-------ALADLDSCERAILRQSK 169 >gi|304390381|ref|ZP_07372334.1| GTP-binding protein YchF [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326137|gb|EFL93382.1| GTP-binding protein YchF [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 361 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI GLPN GKST ++TRA A+YPF T+ PN+G+V K Sbjct: 5 IGIAGLPNVGKSTIFNALTRANVLAANYPFATIDPNVGVVPLPDPRLQVLSDMFQSEKIV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI+K A QG G+G++FL + + + A + Sbjct: 65 PATVSFVDIAGIVKGASQGEGLGNKFLANIREADAICQVTRAFTD 109 >gi|325293591|ref|YP_004279455.1| GTP-dependent nucleic acid-binding protein engD [Agrobacterium sp. H13-3] gi|325061444|gb|ADY65135.1| GTP-dependent nucleic acid-binding protein engD [Agrobacterium sp. H13-3] Length = 367 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMQQLAAIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAVVHVLRCFEDD 111 >gi|307354500|ref|YP_003895551.1| GTPase of unknown function domain-containing protein [Methanoplanus petrolearius DSM 11571] gi|307157733|gb|ADN37113.1| GTPase of unknown function domain protein [Methanoplanus petrolearius DSM 11571] Length = 390 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 23/107 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VK 202 + I G PN GKSTF + T A +IA+YPFTT+ N GI Sbjct: 4 LAIAGKPNCGKSTFFTASTLAPAEIANYPFTTIDANHGIAYARINCPCKELGIENCQACN 63 Query: 203 EGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 +G + FI L D+ G++ +AH+G G+G++FL + +LHI+ A Sbjct: 64 DGVR-FIQIGLIDVAGLVPDAHKGKGLGNKFLDNLREADAILHIIDA 109 >gi|260948124|ref|XP_002618359.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] gi|238848231|gb|EEQ37695.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] Length = 368 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 53/87 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+FL+ VT K + A+Y FTTL GI++ E + D+PGIIK Sbjct: 65 ARVSLIGFPSVGKSSFLSKVTNTKSEAANYEFTTLTSVGGILEYNGAEVQIVDLPGIIKA 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 A QG G G + + + + +++ ++ A Sbjct: 125 ASQGKGRGRQVIAVSRTSDLIMMVLDA 151 >gi|238897567|ref|YP_002923246.1| translation-associated GTPase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465324|gb|ACQ67098.1| translation-associated GTPase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 I+GLPN GKST ++T+A + A++PF T+ PN GIV Sbjct: 6 AIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNKGIVPVPDLRLEQLEAIIQPKSVVH 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + EF+ DI G++K A +G G+G++FL H T + +V +++ Sbjct: 66 THMEFV--DIAGLVKGASKGDGLGNQFLSHIRETEAIAQVVRCFDDD 110 >gi|254451786|ref|ZP_05065223.1| GTP-binding protein YchF [Octadecabacter antarcticus 238] gi|198266192|gb|EDY90462.1| GTP-binding protein YchF [Octadecabacter antarcticus 238] Length = 365 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+G+PN GKST ++TR A + A++PF T+ PN+G V G K Sbjct: 5 MGIVGMPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLDKLAAIAGSKTI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + T + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFED 110 >gi|94269203|ref|ZP_01291399.1| GTP-binding protein, HSR1-related:conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93451308|gb|EAT02188.1| GTP-binding protein, HSR1-related:conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 364 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T A + A+YPF T+ PN+G+V Sbjct: 6 GIVGLPNVGKSTIFNALTAAGIESANYPFCTIEPNVGMVPVPDHRLDALAAMARTRNKVN 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL H + + H+V ++ Sbjct: 66 AKMEFV--DIAGLVSGASRGEGLGNQFLGHIRQVDAIAHVVRCFTDD 110 >gi|15839230|ref|NP_299918.1| GTP-dependent nucleic acid-binding protein EngD [Xylella fastidiosa 9a5c] gi|9107872|gb|AAF85438.1|AE004071_6 GTP-binding protein [Xylella fastidiosa 9a5c] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 21/105 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK------ 206 GI+GLPN GKST ++T+A A++PF T+ PN+G+V E K Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNQLAEIVKPQKLLP 65 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 EF+ DI G++ A G G+G++FL H + H+V E Sbjct: 66 TVIEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAIAHVVRCFE 108 >gi|145588330|ref|YP_001154927.1| GTP-binding protein YchF [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046736|gb|ABP33363.1| GTP-binding protein YchF [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 364 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAALAEIVKPERVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL + T + H+V E+ Sbjct: 66 AAVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFED 109 >gi|14042261|dbj|BAB55174.1| unnamed protein product [Homo sapiens] Length = 396 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPNAGKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNAGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|328675849|gb|AEB28524.1| GTP-binding and nucleic acid-binding protein YchF [Francisella cf. novicida 3523] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T A +YPF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTEAGIDAENYPFCTIDPNVGIVSVPDQRLNELAKIVKPERIVT 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDD 110 >gi|187931854|ref|YP_001891839.1| GTP-dependent nucleic acid-binding protein EngD [Francisella tularensis subsp. mediasiatica FSC147] gi|187712763|gb|ACD31060.1| GTP-binding protein YchF [Francisella tularensis subsp. mediasiatica FSC147] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T A +YPF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTEAGIDAENYPFCTIDPNVGIVSIPDQRLNELAKIVKPERIIT 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 66 TTMEFV--DIAGLVTGASKGEGLGNKFLANIRETDAIAHVVRCFEDD 110 >gi|146302854|ref|YP_001190170.1| translation-associated GTPase [Metallosphaera sedula DSM 5348] gi|145701104|gb|ABP94246.1| GTP-binding conserved hypothetical protein TIGR00650 [Metallosphaera sedula DSM 5348] Length = 400 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------------------- 200 IG+IG N GKSTF ++ T + +IA+ PF T+ PN+G+ Sbjct: 4 IGLIGKTNVGKSTFFSAATMLEVEIANRPFVTIEPNVGVAYVRKKCVHTELGVKCQPKNS 63 Query: 201 VKEGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 + G FI L D+ G+I AH+G G+G++FL + VL+H+V A Sbjct: 64 ICIGDYRFIPVKLVDVAGLIPGAHEGRGLGNKFLDDLRKADVLIHVVDA 112 >gi|157825994|ref|YP_001493714.1| GTP-dependent nucleic acid-binding protein EngD [Rickettsia akari str. Hartford] gi|157799952|gb|ABV75206.1| translation-associated GTPase [Rickettsia akari str. Hartford] Length = 365 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 22/112 (19%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNL------------------ 198 +I +GI+GLPN GKST ++T ++ A+YPF T+ PN Sbjct: 1 MILKLGIVGLPNVGKSTLFNALTASQAADAANYPFCTIEPNSSKVLVPDERLQRLASLAG 60 Query: 199 -GIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 G + Y EF+ DI G+++ A +G G+G++FL H +LH++ E+ Sbjct: 61 SGKIIPSYIEFV--DIAGLVEGASKGEGLGNKFLSHIREVSAILHVLRCFED 110 >gi|308050542|ref|YP_003914108.1| GTP-binding protein YchF [Ferrimonas balearica DSM 9799] gi|307632732|gb|ADN77034.1| GTP-binding protein YchF [Ferrimonas balearica DSM 9799] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDARLDALAKIVNPQRVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A G G+G++FL + T + H+V E + Sbjct: 66 TTMEFV--DIAGLVKGASTGEGLGNKFLANIRETDAIGHVVRCFEND 110 >gi|297582078|ref|ZP_06943997.1| GTP-binding protein [Vibrio cholerae RC385] gi|297533773|gb|EFH72615.1| GTP-binding protein [Vibrio cholerae RC385] Length = 383 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 31/153 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 26 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVKPERILP 85 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ A L+ Sbjct: 86 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIIHVAGKVSPLE 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++ N EL L+ +D+ + L + K Sbjct: 144 DIEIINLEL-------ALADLDSCERAILRQSK 169 >gi|254521390|ref|ZP_05133445.1| GTP-binding protein YchF [Stenotrophomonas sp. SKA14] gi|219718981|gb|EED37506.1| GTP-binding protein YchF [Stenotrophomonas sp. SKA14] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 21/105 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A A++PF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNELAAIINPQKVIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 EF+ DI G++ A G G+G++FL H + H+V E Sbjct: 66 TAVEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFE 108 >gi|169837802|ref|ZP_02870990.1| translation-associated GTPase [candidate division TM7 single-cell isolate TM7a] Length = 165 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 17/104 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 IGI+GLPN GKST ++T A+YPF T+ PN GIV +LA Sbjct: 7 IGIVGLPNVGKSTTFNALTNNDILAANYPFATIEPNTGIVPVPNPRLEVLAKMYNSNKIL 66 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 DI G++K A +G G+G++FL + + + ++HIV A + Sbjct: 67 PATVTFVDIAGLVKGASKGEGLGNKFLANIRQCNAIVHIVRAFD 110 >gi|145628202|ref|ZP_01784003.1| GTPase ObgE [Haemophilus influenzae 22.1-21] gi|144979977|gb|EDJ89636.1| GTPase ObgE [Haemophilus influenzae 22.1-21] Length = 190 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 5/132 (3%) Query: 208 FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE---ENVQAAYQCILDELSA 264 F++ADIPG+I+ A GAG+G RFLKH ER VL+H+V N I EL Sbjct: 9 FVVADIPGLIEGAADGAGLGIRFLKHLERCRVLIHLVDIAPIDGSNPADNVAIIESELFQ 68 Query: 265 YNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG--QVPFEFSSITGHGIPQILECL 322 Y+ +L +K + ++IDT+ + + E+ Q G + + S+ T +P + + Sbjct: 69 YSEKLSEKPRWLVFNKIDTMSDEEAEERVREITEQLGWEEDYYLISAATRKNVPPLCRDI 128 Query: 323 HDKIFSIRGENE 334 D I + E E Sbjct: 129 MDFIIANPREAE 140 >gi|56707799|ref|YP_169695.1| GTP-dependent nucleic acid-binding protein EngD [Francisella tularensis subsp. tularensis SCHU S4] gi|110670270|ref|YP_666827.1| GTP-dependent nucleic acid-binding protein EngD [Francisella tularensis subsp. tularensis FSC198] gi|254370297|ref|ZP_04986302.1| GTP-binding protein [Francisella tularensis subsp. tularensis FSC033] gi|56604291|emb|CAG45312.1| GTP-binding protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320603|emb|CAL08695.1| GTP-binding protein [Francisella tularensis subsp. tularensis FSC198] gi|151568540|gb|EDN34194.1| GTP-binding protein [Francisella tularensis subsp. tularensis FSC033] gi|282158973|gb|ADA78364.1| translation-associated GTPase [Francisella tularensis subsp. tularensis NE061598] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T A +YPF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTEAGIDAENYPFCTIDPNVGIVSVPDQRLNELAKIVKPERIIT 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 66 TTMEFV--DIAGLVTGASKGEGLGNKFLANIRETDAIAHVVRCFEDD 110 >gi|23502405|ref|NP_698532.1| GTP-dependent nucleic acid-binding protein EngD [Brucella suis 1330] gi|62290422|ref|YP_222215.1| GTP-dependent nucleic acid-binding protein EngD [Brucella abortus bv. 1 str. 9-941] gi|82700345|ref|YP_414919.1| GTP-dependent nucleic acid-binding protein EngD [Brucella melitensis biovar Abortus 2308] gi|161619482|ref|YP_001593369.1| translation-associated GTPase [Brucella canis ATCC 23365] gi|163843793|ref|YP_001628197.1| translation-associated GTPase [Brucella suis ATCC 23445] gi|189024651|ref|YP_001935419.1| GTP-dependent nucleic acid-binding protein EngD [Brucella abortus S19] gi|237815930|ref|ZP_04594927.1| GTP-binding protein YchF [Brucella abortus str. 2308 A] gi|254689723|ref|ZP_05152977.1| GTP-dependent nucleic acid-binding protein EngD [Brucella abortus bv. 6 str. 870] gi|254694213|ref|ZP_05156041.1| GTP-dependent nucleic acid-binding protein EngD [Brucella abortus bv. 3 str. Tulya] gi|254697867|ref|ZP_05159695.1| GTP-dependent nucleic acid-binding protein EngD [Brucella abortus bv. 2 str. 86/8/59] gi|254702256|ref|ZP_05164084.1| GTP-dependent nucleic acid-binding protein EngD [Brucella suis bv. 5 str. 513] gi|254719571|ref|ZP_05181382.1| GTP-dependent nucleic acid-binding protein EngD [Brucella sp. 83/13] gi|254730757|ref|ZP_05189335.1| GTP-dependent nucleic acid-binding protein EngD [Brucella abortus bv. 4 str. 292] gi|256257975|ref|ZP_05463511.1| GTP-dependent nucleic acid-binding protein EngD [Brucella abortus bv. 9 str. C68] gi|256369953|ref|YP_003107464.1| GTP-binding protein, putative [Brucella microti CCM 4915] gi|260546958|ref|ZP_05822697.1| translation-associated GTPase [Brucella abortus NCTC 8038] gi|260565967|ref|ZP_05836437.1| translation-associated GTPase [Brucella suis bv. 4 str. 40] gi|260755255|ref|ZP_05867603.1| translation-associated GTPase [Brucella abortus bv. 6 str. 870] gi|260758476|ref|ZP_05870824.1| translation-associated GTPase [Brucella abortus bv. 4 str. 292] gi|260762301|ref|ZP_05874644.1| translation-associated GTPase [Brucella abortus bv. 2 str. 86/8/59] gi|260884270|ref|ZP_05895884.1| translation-associated GTPase [Brucella abortus bv. 9 str. C68] gi|261214519|ref|ZP_05928800.1| translation-associated GTPase [Brucella abortus bv. 3 str. Tulya] gi|261752826|ref|ZP_05996535.1| translation-associated GTPase [Brucella suis bv. 5 str. 513] gi|265984579|ref|ZP_06097314.1| translation-associated GTPase [Brucella sp. 83/13] gi|294852855|ref|ZP_06793528.1| GTP-binding protein YchF [Brucella sp. NVSL 07-0026] gi|297248808|ref|ZP_06932526.1| GTP-binding protein YchF [Brucella abortus bv. 5 str. B3196] gi|306837766|ref|ZP_07470632.1| GTP-binding protein YchF [Brucella sp. NF 2653] gi|306843116|ref|ZP_07475738.1| GTP-binding protein YchF [Brucella sp. BO2] gi|306844537|ref|ZP_07477126.1| GTP-binding protein YchF [Brucella sp. BO1] gi|23348391|gb|AAN30447.1| GTP-binding protein, putative [Brucella suis 1330] gi|62196554|gb|AAX74854.1| GTP-binding protein, hypothetical [Brucella abortus bv. 1 str. 9-941] gi|82616446|emb|CAJ11509.1| Glutamine amidotransferase, class-II:ATP/GTP-binding site motif A (P-loop):Conserved hypothetical protein 92:GTP1/OBG [Brucella melitensis biovar Abortus 2308] gi|161336293|gb|ABX62598.1| GTP-binding protein YchF [Brucella canis ATCC 23365] gi|163674516|gb|ABY38627.1| GTP-binding protein YchF [Brucella suis ATCC 23445] gi|189020223|gb|ACD72945.1| GTP-binding protein, putative [Brucella abortus S19] gi|237789228|gb|EEP63439.1| GTP-binding protein YchF [Brucella abortus str. 2308 A] gi|256000116|gb|ACU48515.1| GTP-binding protein, putative [Brucella microti CCM 4915] gi|260096008|gb|EEW79885.1| translation-associated GTPase [Brucella abortus NCTC 8038] gi|260155485|gb|EEW90565.1| translation-associated GTPase [Brucella suis bv. 4 str. 40] gi|260668794|gb|EEX55734.1| translation-associated GTPase [Brucella abortus bv. 4 str. 292] gi|260672733|gb|EEX59554.1| translation-associated GTPase [Brucella abortus bv. 2 str. 86/8/59] gi|260675363|gb|EEX62184.1| translation-associated GTPase [Brucella abortus bv. 6 str. 870] gi|260873798|gb|EEX80867.1| translation-associated GTPase [Brucella abortus bv. 9 str. C68] gi|260916126|gb|EEX82987.1| translation-associated GTPase [Brucella abortus bv. 3 str. Tulya] gi|261742579|gb|EEY30505.1| translation-associated GTPase [Brucella suis bv. 5 str. 513] gi|264663171|gb|EEZ33432.1| translation-associated GTPase [Brucella sp. 83/13] gi|294821444|gb|EFG38443.1| GTP-binding protein YchF [Brucella sp. NVSL 07-0026] gi|297175977|gb|EFH35324.1| GTP-binding protein YchF [Brucella abortus bv. 5 str. B3196] gi|306275148|gb|EFM56904.1| GTP-binding protein YchF [Brucella sp. BO1] gi|306286721|gb|EFM58274.1| GTP-binding protein YchF [Brucella sp. BO2] gi|306407151|gb|EFM63364.1| GTP-binding protein YchF [Brucella sp. NF 2653] Length = 367 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRQNEIARIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRINFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDD 111 >gi|119775703|ref|YP_928443.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella amazonensis SB2B] gi|119768203|gb|ABM00774.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 31/153 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDELAAIVKPERVIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ + Sbjct: 66 TSMEFV--DIAGLVAGASKGEGLGNKFLANIRETEAIGHVVRCFENENIVHVANRVDPAG 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++ N+EL L+ +D+V+ + ++K Sbjct: 124 DIEVINTEL-------ALADLDSVERAIVRQQK 149 >gi|320094354|ref|ZP_08026142.1| GTP-dependent nucleic acid-binding protein EngD [Actinomyces sp. oral taxon 178 str. F0338] gi|319978742|gb|EFW10297.1| GTP-dependent nucleic acid-binding protein EngD [Actinomyces sp. oral taxon 178 str. F0338] Length = 366 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI GLPN GKST ++TRA A+YPF T+ PN+G+V + Sbjct: 5 IGIAGLPNVGKSTLFNALTRATVLAANYPFATIEPNVGVVPLPDPRLDKLAEMFHSQRTV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI GI++ A +G G+G++FL + + + A + Sbjct: 65 HATVSFVDIAGIVRGASEGEGLGNQFLANIREADAICQVTRAFND 109 >gi|310800166|gb|EFQ35059.1| hypothetical protein GLRG_10203 [Glomerella graminicola M1.001] Length = 417 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 26/111 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P+AGKST L S+T A K+ ++PFTT+ PN Sbjct: 7 IGLVGKPSAGKSTTLNSLTDASSKVGNFPFTTIDPQRAIGYLQIDCACARYNVSDRCRPN 66 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G +G + L D+ G++ AHQG G+G++FL L+H+V A Sbjct: 67 YGACVDGRRSVPIELLDVAGLVPGAHQGKGLGNKFLDDLRHADALIHVVDA 117 >gi|262067285|ref|ZP_06026897.1| GTP-binding protein YchF [Fusobacterium periodonticum ATCC 33693] gi|291379011|gb|EFE86529.1| GTP-binding protein YchF [Fusobacterium periodonticum ATCC 33693] Length = 364 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------------------ 202 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V Sbjct: 4 IGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNVGMVTVPDGRLNELAKIINPERI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL + T + +V +ENV Sbjct: 64 VPATVEFV--DIAGLVKGASKGEGLGNKFLSNIRATSAICQVVRCFDDENV 112 >gi|227487864|ref|ZP_03918180.1| GTP-binding protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227542505|ref|ZP_03972554.1| GTP-binding protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227092191|gb|EEI27503.1| GTP-binding protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227181703|gb|EEI62675.1| GTP-binding protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 359 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-----------YKEFIL 210 +GI+GLPN GKST ++TR A+YPF T+ PN G+V+ + E IL Sbjct: 5 LGIVGLPNVGKSTLFNALTRNDVLAANYPFATINPNEGMVELPDERLKVLAEMFHSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI+K A +G G+G+ FL + + +V A +ENV Sbjct: 65 PATVSFVDIAGIVKGASEGEGMGNAFLSNIREADAICQVVRAFSDENV 112 >gi|134302017|ref|YP_001121986.1| GTP-dependent nucleic acid-binding protein EngD [Francisella tularensis subsp. tularensis WY96-3418] gi|134049794|gb|ABO46865.1| GTP-binding protein YchF [Francisella tularensis subsp. tularensis WY96-3418] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T A +YPF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTEAGIDAENYPFCTIDPNVGIVSVPDQRLNELAKIVKPERIIT 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 66 TTMEFV--DIAGLVTGASKGEGLGNKFLANIRETDAIAHVVRCFEDD 110 >gi|194364507|ref|YP_002027117.1| GTP-dependent nucleic acid-binding protein EngD [Stenotrophomonas maltophilia R551-3] gi|194347311|gb|ACF50434.1| GTP-binding protein YchF [Stenotrophomonas maltophilia R551-3] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 21/105 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A A++PF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNELAAIINPQKVIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 EF+ DI G++ A G G+G++FL H + H+V E Sbjct: 66 TAVEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFE 108 >gi|221135307|ref|ZP_03561610.1| translation-associated GTPase [Glaciecola sp. HTCC2999] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDAIAEIVNPQKIIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LDEL 262 DI G++ A +G G+G++FL + T + H+V +EN+ + D++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFDDENIVHVSGAVSPADDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 EIINTEL 132 >gi|12957710|gb|AAK09228.1|AC084320_15 putative GTP-binding protein [Oryza sativa Japonica Group] gi|108711387|gb|ABF99182.1| GTP-dependent nucleic acid-binding protein engD, putative, expressed [Oryza sativa Japonica Group] Length = 431 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V K + A++PF T+ PN+G+V KE I Sbjct: 67 GIVGLPNVGKSTLFNAIVENGKAQAANFPFCTINPNVGVVAIPDARLHVLSKLSKSKETI 126 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 L DI G++K A +G G+G++FL + +L +V E++ Sbjct: 127 PTSIELVDIAGLVKGASKGEGLGNQFLSNIREVDSILQVVRCFEDD 172 >gi|208779397|ref|ZP_03246743.1| GTP-binding protein YchF [Francisella novicida FTG] gi|254372960|ref|ZP_04988449.1| GTP-binding protein [Francisella tularensis subsp. novicida GA99-3549] gi|254374411|ref|ZP_04989893.1| GTP-binding protein YchF [Francisella novicida GA99-3548] gi|151570687|gb|EDN36341.1| GTP-binding protein [Francisella novicida GA99-3549] gi|151572131|gb|EDN37785.1| GTP-binding protein YchF [Francisella novicida GA99-3548] gi|208745197|gb|EDZ91495.1| GTP-binding protein YchF [Francisella novicida FTG] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T A +YPF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTEAGIDAENYPFCTIDPNVGIVSVPDQRLNELAKIVKPERIIT 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDD 110 >gi|254304334|ref|ZP_04971692.1| GTP-binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324526|gb|EDK89776.1| GTP-binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 364 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 37/160 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------------------ 202 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V Sbjct: 4 IGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNVGVVTVPDERLNELAKIINPQKI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI-- 258 EFI DI G++K A +G G G++FL + T + +V ++N+ + Sbjct: 64 VAATVEFI--DIAGLVKGASKGEGRGNKFLSNIRSTSAICQVVRCFDDDNITHVDGSVDP 121 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTVDS-----DTLARKK 293 L ++ N+EL + I+TVD + LAR K Sbjct: 122 LRDIDVINTELI-------FADIETVDKAIEKHEKLARNK 154 >gi|72046724|ref|XP_797209.1| PREDICTED: similar to GTP binding protein [Strongylocentrotus purpuratus] gi|115974058|ref|XP_001177691.1| PREDICTED: similar to GTP binding protein [Strongylocentrotus purpuratus] Length = 394 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 23/155 (14%) Query: 149 EKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN----------L 198 +K+++ ++ IGI+GLPN GKSTF +T+++ ++PF T+ PN Sbjct: 12 KKVLFGRVGTSLKIGIVGLPNVGKSTFFNVLTKSQAAAENFPFCTIDPNENKVPVPDDRF 71 Query: 199 GIVKEGYKEFI-------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-- 249 + E +K + DI G++ AH+G G+G+ FL H + + H+ A E+ Sbjct: 72 DFLCEFHKPLSKVPAFLNVTDIAGLVAGAHEGQGLGNAFLSHIKACDAIFHVCRAFEDEE 131 Query: 250 --NVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 +V + D + +N ELR K +I L+ +D Sbjct: 132 VTHVDGDINPVRDLDTIFN-ELRLK-DIEYLTDVD 164 >gi|17986762|ref|NP_539396.1| GTP-dependent nucleic acid-binding protein EngD [Brucella melitensis bv. 1 str. 16M] gi|225853016|ref|YP_002733249.1| GTP-dependent nucleic acid-binding protein EngD [Brucella melitensis ATCC 23457] gi|256045159|ref|ZP_05448058.1| GTP-dependent nucleic acid-binding protein EngD [Brucella melitensis bv. 1 str. Rev.1] gi|256114111|ref|ZP_05454865.1| GTP-dependent nucleic acid-binding protein EngD [Brucella melitensis bv. 3 str. Ether] gi|256263504|ref|ZP_05466036.1| translation-associated GTPase [Brucella melitensis bv. 2 str. 63/9] gi|260565241|ref|ZP_05835725.1| translation-associated GTPase [Brucella melitensis bv. 1 str. 16M] gi|265991591|ref|ZP_06104148.1| translation-associated GTPase [Brucella melitensis bv. 1 str. Rev.1] gi|265995429|ref|ZP_06107986.1| translation-associated GTPase [Brucella melitensis bv. 3 str. Ether] gi|17982390|gb|AAL51660.1| gtp-binding protein [Brucella melitensis bv. 1 str. 16M] gi|225641381|gb|ACO01295.1| GTP-binding protein YchF [Brucella melitensis ATCC 23457] gi|260151309|gb|EEW86403.1| translation-associated GTPase [Brucella melitensis bv. 1 str. 16M] gi|262766542|gb|EEZ12331.1| translation-associated GTPase [Brucella melitensis bv. 3 str. Ether] gi|263002375|gb|EEZ14950.1| translation-associated GTPase [Brucella melitensis bv. 1 str. Rev.1] gi|263093526|gb|EEZ17560.1| translation-associated GTPase [Brucella melitensis bv. 2 str. 63/9] gi|326409555|gb|ADZ66620.1| GTP-dependent nucleic acid-binding protein EngD [Brucella melitensis M28] gi|326539261|gb|ADZ87476.1| GTP-binding protein YchF [Brucella melitensis M5-90] Length = 367 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRQNEIARIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRINFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDD 111 >gi|332678300|gb|AEE87429.1| GTP-binding and nucleic acid-binding protein YchF [Francisella cf. novicida Fx1] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T A +YPF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTEAGIDAENYPFCTIDPNVGIVSVPDQRLNELAKIVKPERIIT 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDD 110 >gi|294631179|ref|ZP_06709739.1| GTP-binding protein YchF [Streptomyces sp. e14] gi|292834512|gb|EFF92861.1| GTP-binding protein YchF [Streptomyces sp. e14] Length = 362 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 22/110 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA---------- 211 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V G + LA Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVV--GVPDGRLAQLASIFKSER 62 Query: 212 ---------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI++ A +G G+G++FL + + + ++ A +ENV Sbjct: 63 IIPATVDFVDIAGIVRGASEGEGLGNKFLANIRESDAICQVIRAFKDENV 112 >gi|239943965|ref|ZP_04695902.1| translation-associated GTPase [Streptomyces roseosporus NRRL 15998] gi|239990421|ref|ZP_04711085.1| translation-associated GTPase [Streptomyces roseosporus NRRL 11379] gi|291447430|ref|ZP_06586820.1| translation-associated GTPase [Streptomyces roseosporus NRRL 15998] gi|291350377|gb|EFE77281.1| translation-associated GTPase [Streptomyces roseosporus NRRL 15998] Length = 362 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V G + + Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDPRLNKLAEIFGSQRLL 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 A DI GI++ A +G G+G++FL + + + ++ A +ENV Sbjct: 65 PATVDFVDIAGIVRGASEGEGLGNKFLANIRESDAICQVIRAFKDENV 112 >gi|21223433|ref|NP_629212.1| GTP-dependent nucleic acid-binding protein EngD [Streptomyces coelicolor A3(2)] gi|256785462|ref|ZP_05523893.1| GTP-dependent nucleic acid-binding protein EngD [Streptomyces lividans TK24] gi|289769360|ref|ZP_06528738.1| GTP-binding protein YchF [Streptomyces lividans TK24] gi|13810421|emb|CAC37449.1| putative ATP/GTP binding protein [Streptomyces coelicolor A3(2)] gi|289699559|gb|EFD66988.1| GTP-binding protein YchF [Streptomyces lividans TK24] Length = 362 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGY-KEFIL 210 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V E + E IL Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDPRLTKLAEIFSSEKIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI++ A +G G+G++FL + + + ++ A +ENV Sbjct: 65 PATVDFVDIAGIVRGASEGEGLGNKFLANIRESDAICQVIRAFKDENV 112 >gi|225627979|ref|ZP_03786015.1| GTP-binding protein YchF [Brucella ceti str. Cudo] gi|254708204|ref|ZP_05170032.1| GTP-dependent nucleic acid-binding protein EngD [Brucella pinnipedialis M163/99/10] gi|254710573|ref|ZP_05172384.1| GTP-dependent nucleic acid-binding protein EngD [Brucella pinnipedialis B2/94] gi|254714756|ref|ZP_05176567.1| GTP-dependent nucleic acid-binding protein EngD [Brucella ceti M644/93/1] gi|254717818|ref|ZP_05179629.1| GTP-dependent nucleic acid-binding protein EngD [Brucella ceti M13/05/1] gi|256032068|ref|ZP_05445682.1| GTP-dependent nucleic acid-binding protein EngD [Brucella pinnipedialis M292/94/1] gi|256160264|ref|ZP_05457958.1| GTP-dependent nucleic acid-binding protein EngD [Brucella ceti M490/95/1] gi|256255470|ref|ZP_05461006.1| GTP-dependent nucleic acid-binding protein EngD [Brucella ceti B1/94] gi|260169203|ref|ZP_05756014.1| GTP-dependent nucleic acid-binding protein EngD [Brucella sp. F5/99] gi|261219664|ref|ZP_05933945.1| translation-associated GTPase [Brucella ceti M13/05/1] gi|261222675|ref|ZP_05936956.1| translation-associated GTPase [Brucella ceti B1/94] gi|261315708|ref|ZP_05954905.1| translation-associated GTPase [Brucella pinnipedialis M163/99/10] gi|261318146|ref|ZP_05957343.1| translation-associated GTPase [Brucella pinnipedialis B2/94] gi|261322553|ref|ZP_05961750.1| translation-associated GTPase [Brucella ceti M644/93/1] gi|261758715|ref|ZP_06002424.1| translation-associated GTPase [Brucella sp. F5/99] gi|265989177|ref|ZP_06101734.1| translation-associated GTPase [Brucella pinnipedialis M292/94/1] gi|265998639|ref|ZP_06111196.1| translation-associated GTPase [Brucella ceti M490/95/1] gi|225617142|gb|EEH14188.1| GTP-binding protein YchF [Brucella ceti str. Cudo] gi|260921259|gb|EEX87912.1| translation-associated GTPase [Brucella ceti B1/94] gi|260924753|gb|EEX91321.1| translation-associated GTPase [Brucella ceti M13/05/1] gi|261295243|gb|EEX98739.1| translation-associated GTPase [Brucella ceti M644/93/1] gi|261297369|gb|EEY00866.1| translation-associated GTPase [Brucella pinnipedialis B2/94] gi|261304734|gb|EEY08231.1| translation-associated GTPase [Brucella pinnipedialis M163/99/10] gi|261738699|gb|EEY26695.1| translation-associated GTPase [Brucella sp. F5/99] gi|262553263|gb|EEZ09097.1| translation-associated GTPase [Brucella ceti M490/95/1] gi|264661374|gb|EEZ31635.1| translation-associated GTPase [Brucella pinnipedialis M292/94/1] Length = 367 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRQNEIARIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRINFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDD 111 >gi|218193845|gb|EEC76272.1| hypothetical protein OsI_13746 [Oryza sativa Indica Group] gi|222625906|gb|EEE60038.1| hypothetical protein OsJ_12813 [Oryza sativa Japonica Group] Length = 428 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V K + A++PF T+ PN+G+V KE I Sbjct: 64 GIVGLPNVGKSTLFNAIVENGKAQAANFPFCTINPNVGVVAIPDARLHVLSKLSKSKETI 123 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 L DI G++K A +G G+G++FL + +L +V E++ Sbjct: 124 PTSIELVDIAGLVKGASKGEGLGNQFLSNIREVDSILQVVRCFEDD 169 >gi|254369283|ref|ZP_04985295.1| GTP-binding protein [Francisella tularensis subsp. holarctica FSC022] gi|157122233|gb|EDO66373.1| GTP-binding protein [Francisella tularensis subsp. holarctica FSC022] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T A +YPF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTEAGIDAENYPFCTIDPNVGIVSVPDQRLNELAKIVKPERIIT 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 66 TTMEFV--DIAGLVTGASKGEGLGNKFLANIRETDAIAHVVRCFEDD 110 >gi|119944669|ref|YP_942349.1| GTP-binding protein YchF [Psychromonas ingrahamii 37] gi|119863273|gb|ABM02750.1| GTP-binding protein YchF [Psychromonas ingrahamii 37] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN GIV + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGIVPVPDHRLDKLAEIVNPQRVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + T + H+V +++ Sbjct: 66 TTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIGHVVRCFQDD 110 >gi|70606433|ref|YP_255303.1| translation-associated GTPase [Sulfolobus acidocaldarius DSM 639] gi|68567081|gb|AAY80010.1| GTPase [Sulfolobus acidocaldarius DSM 639] Length = 400 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--VKEG--------------- 204 +G+IG N GKSTF ++ T +IA+ PF T+ PN+GI V++ Sbjct: 4 VGLIGKTNVGKSTFFSAATLIDVEIANRPFVTINPNIGIAYVRDTCVHTEVNVKCNPRNS 63 Query: 205 -------YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 Y L D+ G+I AHQG G+G++FL + VL+H++ A Sbjct: 64 VDMDNYRYIPIKLVDVAGLIPGAHQGRGLGNKFLDDLRKADVLIHVIDA 112 >gi|305663669|ref|YP_003859957.1| GTP-binding conserved hypothetical protein TIGR00650 [Ignisphaera aggregans DSM 17230] gi|304378238|gb|ADM28077.1| GTP-binding conserved hypothetical protein TIGR00650 [Ignisphaera aggregans DSM 17230] Length = 407 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 25/110 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------- 201 IG++G N GKSTF ++ T KI + PF TL P++GI Sbjct: 9 IGLLGKTNVGKSTFFSAATMIPVKIENRPFVTLEPHVGISYVRKRCIHPDLGLPKCTPVN 68 Query: 202 -----KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 E + L D+PG++K+AH+G G+G++FL + L+H+V A Sbjct: 69 SLCIRNERFIPVTLVDLPGLVKDAHKGRGLGNKFLDAIRQADALIHVVDA 118 >gi|302877830|ref|YP_003846394.1| GTP-binding protein YchF [Gallionella capsiferriformans ES-2] gi|302580619|gb|ADL54630.1| GTP-binding protein YchF [Gallionella capsiferriformans ES-2] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T+A +YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRMDELAKIVKPQRMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T ++++V E ENV Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFEDENV 112 >gi|190572921|ref|YP_001970766.1| GTP-dependent nucleic acid-binding protein EngD [Stenotrophomonas maltophilia K279a] gi|190010843|emb|CAQ44452.1| putative ATP/GTP-binding protein [Stenotrophomonas maltophilia K279a] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 21/105 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A A++PF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNELAGIINPQKVIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 EF+ DI G++ A G G+G++FL H + H+V E Sbjct: 66 TAVEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFE 108 >gi|269102020|ref|ZP_06154717.1| GTP-binding and nucleic acid-binding protein YchF [Photobacterium damselae subsp. damselae CIP 102761] gi|268161918|gb|EEZ40414.1| GTP-binding and nucleic acid-binding protein YchF [Photobacterium damselae subsp. damselae CIP 102761] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 26/154 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + F+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRMDALAVFVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 DI G++ A +G G+G++FL + T + H+V E +D L Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENIVHVAGRIDPL--- 122 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 + ++I+ L ++ D DT R LA + Sbjct: 123 -----EDMDIINL-ELAMADLDTCERALQRLAKR 150 >gi|256061590|ref|ZP_05451731.1| GTP-dependent nucleic acid-binding protein EngD [Brucella neotomae 5K33] gi|261325597|ref|ZP_05964794.1| translation-associated GTPase [Brucella neotomae 5K33] gi|261301577|gb|EEY05074.1| translation-associated GTPase [Brucella neotomae 5K33] Length = 367 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRQNEIARIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRINFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDD 111 >gi|225444063|ref|XP_002263885.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297740845|emb|CBI31027.3| unnamed protein product [Vitis vinifera] Length = 394 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 23/137 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IGI+GLPN GKST ++T+ ++PF T+ PN + I E ++ Sbjct: 27 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLYKPKSEV 86 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+++ AHQG G+G+ FL H + H++ A E+ +V + + D Sbjct: 87 SAFLEIHDIAGLVRGAHQGQGLGNSFLSHIRAVDGIFHVLRAFEDPDIIHVDDSVDPVRD 146 Query: 261 ELSAYNSELR-KKIEIV 276 L + ELR K IE + Sbjct: 147 -LEVISEELRLKDIEFI 162 >gi|254390235|ref|ZP_05005454.1| ATP/GTP binding protein [Streptomyces clavuligerus ATCC 27064] gi|294814792|ref|ZP_06773435.1| ATP/GTP binding protein [Streptomyces clavuligerus ATCC 27064] gi|326443171|ref|ZP_08217905.1| GTP-binding protein YchF [Streptomyces clavuligerus ATCC 27064] gi|197703941|gb|EDY49753.1| ATP/GTP binding protein [Streptomyces clavuligerus ATCC 27064] gi|294327391|gb|EFG09034.1| ATP/GTP binding protein [Streptomyces clavuligerus ATCC 27064] Length = 362 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V G + + Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDERLTKLAEIFGSQRVL 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 A DI GI++ A +G G+G++FL + + + ++ A +ENV Sbjct: 65 PATVDFVDIAGIVRGASEGEGLGNKFLANIRESDAICQVIRAFKDENV 112 >gi|237738853|ref|ZP_04569334.1| GTP-binding protein [Fusobacterium sp. 2_1_31] gi|229423956|gb|EEO39003.1| GTP-binding protein [Fusobacterium sp. 2_1_31] Length = 364 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------------------ 202 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V Sbjct: 4 IGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNVGMVTVPDERLNALAQIINPERI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL + T + +V +ENV Sbjct: 64 VPATVEFV--DIAGLVKGASKGEGLGNKFLSNIRATSAICQVVRCFDDENV 112 >gi|254482869|ref|ZP_05096106.1| GTP-binding protein YchF [marine gamma proteobacterium HTCC2148] gi|214036950|gb|EEB77620.1| GTP-binding protein YchF [marine gamma proteobacterium HTCC2148] Length = 364 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++PF T+ PN GIV +E Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIDAENFPFCTIEPNAGIVPIPDPRQDKISVIVKPEREVA 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENV 112 >gi|94265600|ref|ZP_01289344.1| GTP-binding protein, HSR1-related:conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93453879|gb|EAT04237.1| GTP-binding protein, HSR1-related:conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 364 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T A + A+YPF T+ PN+G+V Sbjct: 6 GIVGLPNVGKSTIFNALTAAGIESANYPFCTIEPNVGMVPVPDHRLDALAAMARTRNKVN 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL H + + H+V ++ Sbjct: 66 AKMEFV--DIAGLVSGASRGEGLGNQFLGHIRQVDAIAHVVRCFTDD 110 >gi|89256304|ref|YP_513666.1| GTP-dependent nucleic acid-binding protein EngD [Francisella tularensis subsp. holarctica LVS] gi|115314751|ref|YP_763474.1| GTP-dependent nucleic acid-binding protein EngD [Francisella tularensis subsp. holarctica OSU18] gi|156502373|ref|YP_001428438.1| GTP-dependent nucleic acid-binding protein EngD [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010181|ref|ZP_02275112.1| GTP-binding protein YchF [Francisella tularensis subsp. holarctica FSC200] gi|254367637|ref|ZP_04983658.1| GTP-binding protein [Francisella tularensis subsp. holarctica 257] gi|290953138|ref|ZP_06557759.1| GTP-dependent nucleic acid-binding protein EngD [Francisella tularensis subsp. holarctica URFT1] gi|295313666|ref|ZP_06804250.1| GTP-dependent nucleic acid-binding protein EngD [Francisella tularensis subsp. holarctica URFT1] gi|89144135|emb|CAJ79394.1| GTP-binding protein [Francisella tularensis subsp. holarctica LVS] gi|115129650|gb|ABI82837.1| GTP-binding protein [Francisella tularensis subsp. holarctica OSU18] gi|134253448|gb|EBA52542.1| GTP-binding protein [Francisella tularensis subsp. holarctica 257] gi|156252976|gb|ABU61482.1| GTP-binding protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T A +YPF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTEAGIDAENYPFCTIDPNVGIVSVPDQRLNELAKIVKPERIIT 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 66 TTMEFV--DIAGLVTGASKGEGLGNKFLANIRETDAIAHVVRCFEDD 110 >gi|71275256|ref|ZP_00651543.1| Conserved hypothetical protein 92 [Xylella fastidiosa Dixon] gi|71902207|ref|ZP_00684219.1| Conserved hypothetical protein 92 [Xylella fastidiosa Ann-1] gi|170731254|ref|YP_001776687.1| GTP-dependent nucleic acid-binding protein EngD [Xylella fastidiosa M12] gi|71164065|gb|EAO13780.1| Conserved hypothetical protein 92 [Xylella fastidiosa Dixon] gi|71728033|gb|EAO30244.1| Conserved hypothetical protein 92 [Xylella fastidiosa Ann-1] gi|167966047|gb|ACA13057.1| GTP-binding protein [Xylella fastidiosa M12] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 21/105 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK------ 206 GI+GLPN GKST ++T+A A++PF T+ PN+G+V E K Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNQLAEIVKPQKLLP 65 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 EF+ DI G++ A G G+G++FL H + H+V E Sbjct: 66 TAIEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAIAHVVRCFE 108 >gi|332969578|gb|EGK08596.1| GTP-dependent nucleic acid-binding protein EngD [Kingella kingae ATCC 23330] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTKSGIEAANYPFCTIEPNVGIVEVPDPRMDELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|326796208|ref|YP_004314028.1| GTP-binding protein YchF [Marinomonas mediterranea MMB-1] gi|326546972|gb|ADZ92192.1| GTP-binding protein YchF [Marinomonas mediterranea MMB-1] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T+A ++PF T+ PN GIV + E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAGIGAENFPFCTIEPNAGIVAMPDPRLDALAEIVKPERV 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + T + H+V E++ Sbjct: 64 LATTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIAHVVRCFEDD 110 >gi|227832775|ref|YP_002834482.1| putative GTP-binding protein [Corynebacterium aurimucosum ATCC 700975] gi|262182734|ref|ZP_06042155.1| GTP-dependent nucleic acid-binding protein EngD [Corynebacterium aurimucosum ATCC 700975] gi|227453791|gb|ACP32544.1| putative GTP-binding protein [Corynebacterium aurimucosum ATCC 700975] Length = 361 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY-KEFIL 210 +GI+GLPN GKST ++TR+ A+YPF T+ PN+G+V+ E + E IL Sbjct: 5 LGIVGLPNVGKSTLFNALTRSDILAANYPFATIEPNVGLVELPDSRLNRLAEIFSSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI++ A +G G+G+ FL + + +V A +ENV Sbjct: 65 PATVSFVDIAGIVEGASKGEGMGNAFLANIREADAICQVVRAFADENV 112 >gi|71899976|ref|ZP_00682122.1| Conserved hypothetical protein 92 [Xylella fastidiosa Ann-1] gi|71730263|gb|EAO32348.1| Conserved hypothetical protein 92 [Xylella fastidiosa Ann-1] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 21/105 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK------ 206 GI+GLPN GKST ++T+A A++PF T+ PN+G+V E K Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNQLAEIVKPQKLLP 65 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 EF+ DI G++ A G G+G++FL H + H+V E Sbjct: 66 TVIEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAIAHVVRCFE 108 >gi|319440955|ref|ZP_07990111.1| GTP-binding protein YchF [Corynebacterium variabile DSM 44702] Length = 367 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY-KEFIL 210 +GI+GLPN GKST S+TR A+YPF T+ PN G+V+ E Y E IL Sbjct: 5 LGIVGLPNVGKSTLFNSLTRNDVLAANYPFATIEPNSGMVELPDPRLTRLSEIYGSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G+ FL + + +V A ++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGMGNAFLANIRDADAVCEVVRAFSDD 110 >gi|146418677|ref|XP_001485304.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC 6260] Length = 367 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+FL VT K + A+Y FTTL GI++ E + D+PGIIK Sbjct: 64 ARVSLIGFPSVGKSSFLNKVTNTKSEAANYEFTTLTSVGGILEYNGAEVQIVDLPGIIKQ 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A QG G G + + + + +++ ++ A + + Q Q + +EL L K+ Sbjct: 124 ASQGKGRGKQVIAVSRTSDLIMMVLDATKSHDQR--QILENELELMGIRLNKE 174 >gi|332140911|ref|YP_004426649.1| GTP-binding protein YchF [Alteromonas macleodii str. 'Deep ecotype'] gi|327550933|gb|AEA97651.1| GTP-binding protein YchF [Alteromonas macleodii str. 'Deep ecotype'] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDKLAEIVNPQRVIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV--QAAYQCILDEL 262 DI G+++ A +G G+G++FL + T + H+V +EN+ A D++ Sbjct: 66 TTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIGHVVRCFDDENIVHVAGRVSPKDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS ++T + Sbjct: 126 DVINTEL-------ALSDLETTE 141 >gi|54026759|ref|YP_121001.1| GTP-dependent nucleic acid-binding protein EngD [Nocardia farcinica IFM 10152] gi|54018267|dbj|BAD59637.1| putative GTP-binding protein [Nocardia farcinica IFM 10152] Length = 359 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------ 209 +GI+GLPN GKST ++T+ A+YPF T+ PN+G+V E E Sbjct: 5 LGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVPLPDPRLEKLAEIFGSERIV 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +GAG+G++FL + + +V ++ Sbjct: 65 PATVSFVDIAGIVKGASEGAGLGNKFLANIREADAICQVVRVFADD 110 >gi|290957810|ref|YP_003488992.1| ATP/GTP binding protein [Streptomyces scabiei 87.22] gi|260647336|emb|CBG70441.1| putative ATP/GTP binding protein [Streptomyces scabiei 87.22] Length = 362 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V + Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDERLTKLAEIFSSQRVL 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 DI GI++ A +G G+G++FL + + + ++ A + ENV Sbjct: 65 PATVDFVDIAGIVRGASEGEGLGNKFLANIRESDAICQVIRAFQDENV 112 >gi|254704790|ref|ZP_05166618.1| GTP-dependent nucleic acid-binding protein EngD [Brucella suis bv. 3 str. 686] gi|261755484|ref|ZP_05999193.1| translation-associated GTPase [Brucella suis bv. 3 str. 686] gi|261745237|gb|EEY33163.1| translation-associated GTPase [Brucella suis bv. 3 str. 686] Length = 367 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRQNEIARIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRINFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDD 111 >gi|239996492|ref|ZP_04717016.1| translation-associated GTPase [Alteromonas macleodii ATCC 27126] Length = 363 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDKLAEIVKPQRVIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV--QAAYQCILDEL 262 DI G+++ A +G G+G++FL + T + H+V +EN+ A D++ Sbjct: 66 TTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIGHVVRCFDDENIVHVAGRVSPKDDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 DVINTEL 132 >gi|239832420|ref|ZP_04680749.1| GTP-binding protein YchF [Ochrobactrum intermedium LMG 3301] gi|239824687|gb|EEQ96255.1| GTP-binding protein YchF [Ochrobactrum intermedium LMG 3301] Length = 367 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRQNEIAGIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRINFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDD 111 >gi|297559115|ref|YP_003678089.1| GTP-binding protein YchF [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843563|gb|ADH65583.1| GTP-binding protein YchF [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 361 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V G + I Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDALAANYPFATIEPNVGVVGVPDARLGKLAEIFGSAKVI 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI GI++ A G G+G++FL + + + ++ A ++ Sbjct: 65 PATVDFVDIAGIVRGASTGEGLGNKFLANIRESDAICQVIRAFDD 109 >gi|307944183|ref|ZP_07659524.1| GTP-binding protein YchF [Roseibium sp. TrichSKD4] gi|307772529|gb|EFO31749.1| GTP-binding protein YchF [Roseibium sp. TrichSKD4] Length = 366 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDTRLNAIAGIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+++ A +G G+G++FL + ++H++ E+ Sbjct: 66 PTRITFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFED 110 >gi|157964745|ref|YP_001499569.1| GTP-dependent nucleic acid-binding protein EngD [Rickettsia massiliae MTU5] gi|157844521|gb|ABV85022.1| GTP-binding protein YchF [Rickettsia massiliae MTU5] Length = 384 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 28/126 (22%) Query: 144 GILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNL---- 198 +L EK + LKL GI+GLPN GKST ++T ++ A+YPF T+ PN Sbjct: 12 NVLFTEKFMTLKL------GIVGLPNVGKSTLFNALTASQAADAANYPFCTIEPNSSKVL 65 Query: 199 ---------------GIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHI 243 G + Y EF+ DI G++K A +G G+G++FL + +LH+ Sbjct: 66 VPDERLHKLASLAGSGKIIPSYIEFV--DIAGLVKGASKGEGLGNKFLSYIREVDAILHV 123 Query: 244 VSALEE 249 + E+ Sbjct: 124 LRCFED 129 >gi|262203275|ref|YP_003274483.1| GTP-binding protein YchF [Gordonia bronchialis DSM 43247] gi|262086622|gb|ACY22590.1| GTP-binding protein YchF [Gordonia bronchialis DSM 43247] Length = 359 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------ 209 +GI+GLPN GKST ++TR A+YPF T+ PN+G+V+ E E Sbjct: 5 LGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNIGVVELPDSRLERLAEIFGSERIL 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V ++ Sbjct: 65 PATVSFVDIAGIVKGASEGEGMGNQFLANIREADAICQVVRVFADD 110 >gi|294781875|ref|ZP_06747207.1| GTP-binding protein YchF [Fusobacterium sp. 1_1_41FAA] gi|294481686|gb|EFG29455.1| GTP-binding protein YchF [Fusobacterium sp. 1_1_41FAA] Length = 364 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------------------ 202 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V Sbjct: 4 IGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNVGMVTVPDERLNALAQIINPERI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL + T + +V +ENV Sbjct: 64 VPATVEFV--DIAGLVKGASKGEGLGNKFLSNIRATSAICQVVRCFDDENV 112 >gi|238021765|ref|ZP_04602191.1| hypothetical protein GCWU000324_01668 [Kingella oralis ATCC 51147] gi|237866379|gb|EEP67421.1| hypothetical protein GCWU000324_01668 [Kingella oralis ATCC 51147] Length = 363 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMDALAKIVNPQRMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|288940658|ref|YP_003442898.1| GTP-binding protein YchF [Allochromatium vinosum DSM 180] gi|288896030|gb|ADC61866.1| GTP-binding protein YchF [Allochromatium vinosum DSM 180] Length = 363 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A +YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNALTKAAIAAENYPFCTIDPNVGVVPLPDPRLDVIASITKPQKVLP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL + T + H+V E + Sbjct: 66 TSMQFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEND 110 >gi|315657588|ref|ZP_07910470.1| GTP-binding protein YchF [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492060|gb|EFU81669.1| GTP-binding protein YchF [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 195 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI GLPN GKST ++TRA A+YPF T+ PN+G+V K Sbjct: 5 IGIAGLPNVGKSTIFNALTRANVLAANYPFATIDPNVGVVPLPDPRLQVLSDMFQSEKIV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI+K A QG G+G++FL + + + A + Sbjct: 65 PATVSFVDIAGIVKGASQGEGLGNKFLANIREADAICQVTRAFTD 109 >gi|319787940|ref|YP_004147415.1| GTP-binding protein YchF [Pseudoxanthomonas suwonensis 11-1] gi|317466452|gb|ADV28184.1| GTP-binding protein YchF [Pseudoxanthomonas suwonensis 11-1] Length = 363 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A A++PF T+ PN+G+V E I Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNQLAEIINPQKVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 DI G++ A G G+G++FL H + H+V E Sbjct: 66 TAVEFVDIAGLVAGAASGEGLGNKFLAHIREVDAIAHVVRCFE 108 >gi|254446691|ref|ZP_05060166.1| GTP-binding protein YchF [Verrucomicrobiae bacterium DG1235] gi|198256116|gb|EDY80425.1| GTP-binding protein YchF [Verrucomicrobiae bacterium DG1235] Length = 380 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 22/113 (19%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK-------------- 202 L+ GI+GLPN GKST ++TR K + A+YPF T+ PN+G+V Sbjct: 13 LMLKAGIVGLPNVGKSTLFNALTRTRKAESANYPFCTIDPNVGVVNVPDARLQVLQEIAG 72 Query: 203 -----EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++ +V E + Sbjct: 73 TNVVIPAAIEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIVQVVRCFEND 123 >gi|116789076|gb|ABK25108.1| unknown [Picea sitchensis] Length = 392 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 29/162 (17%) Query: 131 KSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYP 190 KS+ +AP A ILG + IGI+GLPN GKST ++T+ ++P Sbjct: 4 KSAKKEAP--AERAILG-------RFSSHLKIGIVGLPNVGKSTLFNTLTKLSIPAENFP 54 Query: 191 FTTLYPNLGIV----------------KEGYKEFI-LADIPGIIKNAHQGAGIGDRFLKH 233 F T+ PN V K F+ + DI G+++ AHQG G+G+ FL H Sbjct: 55 FCTIEPNEARVNVPDERFDWLCSLYKPKSEVSAFLEVHDIAGLVRGAHQGQGLGNNFLSH 114 Query: 234 TERTHVLLHIVSALEENVQAAYQCILD---ELSAYNSELRKK 272 + H+ A ++ + ++D +L ELR K Sbjct: 115 IRAVDGIFHVCRAFDDPDVIHVEDVVDPVRDLEVITEELRLK 156 >gi|13591432|gb|AAK29777.1| putative GTP-binding protein [Brucella abortus] Length = 383 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 22 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRQNEIARIAGSKEII 81 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 82 PTRINFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDD 127 >gi|25027641|ref|NP_737695.1| translation-associated GTPase [Corynebacterium efficiens YS-314] gi|259506958|ref|ZP_05749858.1| GTP-dependent nucleic acid-binding protein EngD [Corynebacterium efficiens YS-314] gi|23492923|dbj|BAC17895.1| putative GTP-binding protein [Corynebacterium efficiens YS-314] gi|259165410|gb|EEW49964.1| GTP-dependent nucleic acid-binding protein EngD [Corynebacterium efficiens YS-314] Length = 361 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY-KEFIL 210 +GI+GLPN GKST ++TR A+YPF T+ PN+G+V+ E + E IL Sbjct: 5 LGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNIGLVELPDDRLPRLAEIFGSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G+ FL + + +V A ++ Sbjct: 65 PATVSFVDIAGIVKGASEGEGMGNAFLANIREADAICQVVRAFSDD 110 >gi|288920885|ref|ZP_06415181.1| GTP-binding protein YchF [Frankia sp. EUN1f] gi|288347717|gb|EFC81998.1| GTP-binding protein YchF [Frankia sp. EUN1f] Length = 358 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 21/102 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA---------- 211 IGI+GLPN GKST ++TR + A+YPF T+ PN+G+V G + LA Sbjct: 5 IGIVGLPNVGKSTLFNALTRNEVLAANYPFATIEPNVGVV--GVPDPRLAKLGEMFSSAR 62 Query: 212 ---------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI G+++ A +G G+G+RFL + + + +V Sbjct: 63 VVPATVSFVDIAGLVRGASEGQGLGNRFLANIRESDAVCQVV 104 >gi|269121241|ref|YP_003309418.1| GTP-binding protein YchF [Sebaldella termitidis ATCC 33386] gi|268615119|gb|ACZ09487.1| GTP-binding protein YchF [Sebaldella termitidis ATCC 33386] Length = 366 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 27/132 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-------KEGYK------- 206 IGI+GLPN GKST ++T+ + + A+YPF T+ PN+G+V +E K Sbjct: 4 IGIVGLPNVGKSTLFNAITKTQNAEAANYPFATIEPNIGMVSVPDSRLEELAKIINPQRT 63 Query: 207 -----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQC 257 EFI DI G++K A +G G+G++FL + T + +V ++ +V+ + Sbjct: 64 LGATVEFI--DIAGLVKGASKGEGLGNQFLTNIRNTAAICQVVRCFDDPNIVHVEGSVDP 121 Query: 258 ILDELSAYNSEL 269 I D + N+EL Sbjct: 122 IRD-IETINAEL 132 >gi|315230089|ref|YP_004070525.1| GTP-binding and nucleic acid-binding protein YchF [Thermococcus barophilus MP] gi|315183117|gb|ADT83302.1| GTP-binding and nucleic acid-binding protein YchF [Thermococcus barophilus MP] Length = 397 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 24/110 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG----IVKEGYKEF-------- 208 +IG++G PN GKSTF ++ T +IA+YPFTT+ N+G I + KE Sbjct: 2 EIGVVGKPNVGKSTFFSAATLVDVQIANYPFTTIEANVGVSYVIAEHPCKELGCAPNPQN 61 Query: 209 ------------ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 + D+ G++ AH+G G+G++FL L+HIV A Sbjct: 62 YEYRDGLALIPIKMIDVAGLVPGAHEGRGLGNKFLDDLRMASALIHIVDA 111 >gi|194477209|ref|YP_002049388.1| hypothetical protein PCC_0763 [Paulinella chromatophora] gi|171192216|gb|ACB43178.1| hypothetical protein PCC_0763 [Paulinella chromatophora] Length = 363 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFIL----------- 210 GI+GLPN GKST F A V A+ A++PF T+ PN+G V K L Sbjct: 5 GIVGLPNVGKSTLFNALVANAQAHAANFPFCTIEPNVGTVSIPDKRLELLSEMSRSKQII 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + ++H+V ++N Sbjct: 65 PARVEFVDIAGLVKGASKGEGLGNKFLANIREVDAIVHVVRCFDDN 110 >gi|325181064|emb|CCA15473.1| Rab1 family GTPase (PiYpt1) putative [Albugo laibachii Nc14] Length = 953 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 17/104 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKE---- 207 IGI+G+PN GKSTF +++ ++PF T+ PN +V E Y+ Sbjct: 588 IGIVGVPNVGKSTFFNCMSKLNIPAENFPFCTIEPNEAVVPVPDQRFHWLVEKYQPTSVV 647 Query: 208 ---FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G+++ A +GAG+G+ FL H + + H+V A + Sbjct: 648 PPVMTITDIAGLVRGASEGAGLGNAFLSHIQAVDAIYHMVRAFD 691 >gi|303256351|ref|ZP_07342367.1| GTP-binding protein YchF [Burkholderiales bacterium 1_1_47] gi|302861080|gb|EFL84155.1| GTP-binding protein YchF [Burkholderiales bacterium 1_1_47] Length = 364 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 24/129 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLAKLAEIVSPQRIVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + + HIV ++N+ A + L+ Sbjct: 66 ATVEFV--DIAGLVAGASKGEGLGNQFLANIRECDAIAHIVRCFNDDNIVHVAGHVDPLE 123 Query: 261 ELSAYNSEL 269 ++S N EL Sbjct: 124 DISVINMEL 132 >gi|92113645|ref|YP_573573.1| translation-associated GTPase [Chromohalobacter salexigens DSM 3043] gi|91796735|gb|ABE58874.1| conserved hypothetical protein [Chromohalobacter salexigens DSM 3043] Length = 363 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 34/158 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN+GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIDAENFPFCTIEPNVGIVPMPDPRLDKLAAIVKPEKV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQCIL 259 EF+ DI G++ A +G G+G++FL + T + H+V + + + A Q Sbjct: 64 IPTTMEFV--DIAGLVAGASKGEGLGNQFLANIRETQAIAHVVRCFDNDNVIHVANQV-- 119 Query: 260 DELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 + R IE + L ++ D DT+ R LA Sbjct: 120 --------DPRADIETINL-ELALADLDTVERAIQRLA 148 >gi|251772229|gb|EES52799.1| GTP-binding protein YchF [Leptospirillum ferrodiazotrophum] Length = 364 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T + +A+YPF T+ P+ GIV Sbjct: 6 GIVGLPNVGKSTLFNALTASAVPVANYPFCTIDPHSGIVPVPDPRLARLSAMYSTRKTVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A QG G+G++FL H +++H++ ++ Sbjct: 66 ATVEFV--DIAGLVKGASQGEGLGNQFLGHIRSVDLVVHVLRGFDD 109 >gi|315636176|ref|ZP_07891430.1| GTP-dependent nucleic acid-binding protein EngD [Arcobacter butzleri JV22] gi|315479537|gb|EFU70216.1| GTP-dependent nucleic acid-binding protein EngD [Arcobacter butzleri JV22] Length = 367 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIV-----------------KE 203 +GI+GLPN GKST ++T+A+ A +YPF T+ PN +V K Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAEAQNYPFCTIEPNKAVVPVPDKRLDELAKIVNPNKI 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+++ A +G G+G++FL + V+LH+V E+ Sbjct: 65 QHSTIDFVDIAGLVRGASKGEGLGNQFLSNIREVEVILHMVRCFED 110 >gi|293363542|ref|ZP_06610298.1| GTP-binding protein YchF [Mycoplasma alligatoris A21JP2] gi|292552891|gb|EFF41645.1| GTP-binding protein YchF [Mycoplasma alligatoris A21JP2] Length = 367 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST +++T+ + + ++YPFTT+ PN+ V K + Sbjct: 6 GIVGLPNVGKSTLFSALTKKQVESSNYPFTTIEPNVSTVALKDKRLDLISEIVKPNKIIH 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F I G+++ A +G G+G++FL + ++H++ E+ Sbjct: 66 ATFDFVGIAGLVQGASKGEGLGNKFLSNIREVDAIIHVIRCFED 109 >gi|257125891|ref|YP_003164005.1| GTP-dependent nucleic acid-binding protein EngD [Leptotrichia buccalis C-1013-b] gi|257049830|gb|ACV39014.1| GTP-binding protein YchF [Leptotrichia buccalis C-1013-b] Length = 367 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 27/132 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-------KEGYK------- 206 IGI+GLPN GKST ++T+ + + A+YPF T+ PN+G+V K+ K Sbjct: 4 IGIVGLPNVGKSTLFNAITKTQNAEAANYPFATIEPNVGLVSVPDLRLKDLEKIVNPERT 63 Query: 207 -----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQC 257 EF+ DI G++K A +G G+G++FL + T + +V +++ V+ + Sbjct: 64 VGATVEFV--DIAGLVKGASKGEGLGNQFLSNIRNTAAICQVVRCFDDDNIIHVEGSVDP 121 Query: 258 ILDELSAYNSEL 269 I D + N+EL Sbjct: 122 IRD-IETINAEL 132 >gi|163782541|ref|ZP_02177538.1| hypothetical protein HG1285_16695 [Hydrogenivirga sp. 128-5-R1-1] gi|159882114|gb|EDP75621.1| hypothetical protein HG1285_16695 [Hydrogenivirga sp. 128-5-R1-1] Length = 370 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 18/102 (17%) Query: 161 DIGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIV----------------KE 203 ++GI+GLPN GKST ++T+ AK + A+YPF T+ PN+G+V K+ Sbjct: 4 NLGIVGLPNVGKSTLFNALTQTAKAQAANYPFCTIEPNVGVVEVPDERLYRIAELEKSKK 63 Query: 204 GYKEFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 FI DI G++K A +G G+G++FL H + ++ Sbjct: 64 VTPTFIEFVDIAGLVKGASKGEGLGNQFLSHIREVDAIAMVL 105 >gi|327281904|ref|XP_003225685.1| PREDICTED: obg-like ATPase 1-like [Anolis carolinensis] Length = 396 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 22/146 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T+++ ++PF T+ PN V F Sbjct: 25 IGIVGLPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDDRFDFLCQYHKPPSKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILD 260 + DI G++K AH G G+G+ FL H + H++ + +++ V+ + + + D Sbjct: 85 PAFLNVVDIAGLVKGAHAGQGLGNAFLSHISACDGIFHLLRSFDDDDITHVEGSIEPVRD 144 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDS 286 + + ELR K E + + ID ++ Sbjct: 145 -IEIIHEELRLKDEEMIMPIIDKLEK 169 >gi|300711817|ref|YP_003737631.1| translation-associated GTPase [Halalkalicoccus jeotgali B3] gi|299125500|gb|ADJ15839.1| translation-associated GTPase [Halalkalicoccus jeotgali B3] Length = 397 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 22/107 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------------------V 201 + + G PNAGKSTF ++ TRA+ +A+YPFTT+ PN G+ Sbjct: 4 LALAGKPNAGKSTFYSAATRAEVDMANYPFTTIDPNRGVSYVRTDCPCLAREERCGTENC 63 Query: 202 KEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 EG Y L D+ G++ AH+G G+G++FL ++ +V A Sbjct: 64 HEGKRYVPVELIDVAGLVPGAHEGRGLGNQFLDALTNADAIITVVDA 110 >gi|290972964|ref|XP_002669220.1| predicted protein [Naegleria gruberi] gi|284082764|gb|EFC36476.1| predicted protein [Naegleria gruberi] Length = 390 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 17/105 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI-------- 209 +IGI+GLPN GKSTF +T + ++PF T+ P+ + + E Y + Sbjct: 22 NIGIVGLPNVGKSTFFNILTNSSVPAENFPFCTIDPSTSHVAVPDERYDWLVKHLGATDN 81 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++KNA +G G+G+ FL H + H+V E Sbjct: 82 APAILNVTDIAGLVKNASEGEGLGNAFLSHIRAVDAIFHMVRTFE 126 >gi|149639528|ref|XP_001515633.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 396 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 22/146 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T+++ ++PF T+ PN V F Sbjct: 25 IGIVGLPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDDRFDFLCQYHKPPSKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILD 260 + DI G++K AH G G+G+ FL H + H++ + E++ ++ + + D Sbjct: 85 PAFLNVVDIAGLVKGAHAGQGLGNAFLSHISACDGIFHLMRSFEDDDITHIEGSVDPVRD 144 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDS 286 + + ELR K E + + ID ++ Sbjct: 145 -IEIIHEELRLKDEEMIMPIIDKLEK 169 >gi|319795867|ref|YP_004157507.1| GTP-binding protein ychf [Variovorax paradoxus EPS] gi|315598330|gb|ADU39396.1| GTP-binding protein YchF [Variovorax paradoxus EPS] Length = 363 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAQLSAIVNPERVVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++ A G G+G++FL H T +++V +ENV Sbjct: 66 AIVEFV--DIAGLVAGASTGEGLGNKFLAHIRETDATVNVVRCFDDENV 112 >gi|157736984|ref|YP_001489667.1| GTP-binding protein, putative [Arcobacter butzleri RM4018] gi|157698838|gb|ABV66998.1| GTP-binding protein, putative [Arcobacter butzleri RM4018] Length = 367 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIV-----------------KE 203 +GI+GLPN GKST ++T+A+ A +YPF T+ PN +V K Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAEAQNYPFCTIEPNKAVVPVPDKRLDELAKIVNPNKI 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+++ A +G G+G++FL + V+LH+V E+ Sbjct: 65 QHSTIDFVDIAGLVRGASKGEGLGNQFLSNIREVEVILHMVRCFED 110 >gi|323454526|gb|EGB10396.1| hypothetical protein AURANDRAFT_23601 [Aureococcus anophagefferens] Length = 402 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 20/140 (14%) Query: 153 WLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYK--- 206 W ++K +G++GLPN GKS+ +T + ++PF T+ PN G+ + +K Sbjct: 18 WGRVKTSLKMGVVGLPNVGKSSLFNLLTDQSAQAENFPFCTIDPNEAQCGVPDQRFKWLC 77 Query: 207 -----------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY 255 + ++ DI G+IK A +GAG+G+ FL H + + H V A + + Sbjct: 78 DLYKPPSKVPAKLLVTDIAGLIKGASEGAGLGNAFLSHIQAVDGIYHCVRAFDSDEVIHV 137 Query: 256 QCILD---ELSAYNSELRKK 272 +D +L SEL KK Sbjct: 138 DDSIDPVRDLETIQSELCKK 157 >gi|317506624|ref|ZP_07964415.1| GTP-binding protein YchF [Segniliparus rugosus ATCC BAA-974] gi|316255056|gb|EFV14335.1| GTP-binding protein YchF [Segniliparus rugosus ATCC BAA-974] Length = 358 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF------------- 208 +GI+GLPN GKST ++T+A A+YPF T+ PN+G+V K Sbjct: 5 LGIVGLPNVGKSTLFNALTQAGVLAANYPFATIEPNVGVVSLPDKRLNALAEVFGSERIV 64 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++ A +GAG+G++FL + + +V A + Sbjct: 65 PASVTFVDIAGLVAGASEGAGLGNKFLANIREADAICQVVRAFAD 109 >gi|158335782|ref|YP_001516956.1| GTP-dependent nucleic acid-binding protein EngD [Acaryochloris marina MBIC11017] gi|158306023|gb|ABW27640.1| GTP-binding protein ychF [Acaryochloris marina MBIC11017] Length = 363 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 GI+GLPN GKST F A V AK + A++PF T+ PN+G+V K Sbjct: 5 GIVGLPNVGKSTLFNALVANAKAEAANFPFCTIEPNVGVVSVPDQRLQILSELSNSAKTV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A QG G+G++FL + ++H+V + + Sbjct: 65 PTRIEFVDIAGLVQGASQGEGLGNQFLANIREVDAIVHVVRCFDSD 110 >gi|332530292|ref|ZP_08406238.1| GTP-binding protein YchF [Hylemonella gracilis ATCC 19624] gi|332040278|gb|EGI76658.1| GTP-binding protein YchF [Hylemonella gracilis ATCC 19624] Length = 363 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLKQLAEIVQPERIVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A G G+G++FL H T ++++V ++ Sbjct: 66 AIVEFV--DIAGLVAGASTGEGLGNKFLAHIRETDAIVNVVRCFSDD 110 >gi|297243636|ref|ZP_06927567.1| GTPase, probable translation factor [Gardnerella vaginalis AMD] gi|296888387|gb|EFH27128.1| GTPase, probable translation factor [Gardnerella vaginalis AMD] Length = 362 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILA--------- 211 IGI+GLPN GKST ++TR +YPF T+ PN GIV ++ +LA Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDHRLPVLAKLVNTEKIV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A ++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFNDD 110 >gi|189501819|ref|YP_001957536.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus Amoebophilus asiaticus 5a2] gi|189497260|gb|ACE05807.1| hypothetical protein Aasi_0386 [Candidatus Amoebophilus asiaticus 5a2] Length = 365 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 17/99 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA---------- 211 GI+GLPN GKST +++ K +++PF T+ PN+GIV + ILA Sbjct: 6 GIVGLPNVGKSTLFNALSNGKALASNFPFCTIEPNVGIVSVPDERLQILAGLIEPKKVVP 65 Query: 212 ------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI G++K A QG G+G++FL + ++H+V Sbjct: 66 TLLEFVDIAGLVKGASQGEGLGNKFLANIREVDAIVHVV 104 >gi|90414100|ref|ZP_01222083.1| putative GTP-binding protein [Photobacterium profundum 3TCK] gi|90324895|gb|EAS41423.1| putative GTP-binding protein [Photobacterium profundum 3TCK] Length = 363 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 27/151 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLAALAEIVKPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + T + H+V E++ V A + L+++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDDNIVHVAGKINPLEDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 N EL L+ +DT + + K Sbjct: 126 EVINLEL-------ALADLDTCERAIFRQAK 149 >gi|302038467|ref|YP_003798789.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus Nitrospira defluvii] gi|300606531|emb|CBK42864.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus Nitrospira defluvii] Length = 363 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 26/176 (14%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T++ +YPF T+ PN+GIV + Y Sbjct: 6 GIVGLPNVGKSTLFNALTKSGIAAENYPFCTIEPNIGIVEVPDARMQALADIVKPQRMQY 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 DI G++ A +G G+G++FL + T ++++V E++ +D + Sbjct: 66 ATTEFVDIAGLVAGASKGEGLGNQFLANIRETDGIVNVVRCFEDDNVVHVAGKVDPI--- 122 Query: 266 NSELRKKIEIVGLSQIDTVDSD-----TLARKKNELATQCGQVPFEFSSITGHGIP 316 S++ + + L+ + TV+ L R ++ A + G++ + ++ G P Sbjct: 123 -SDIATIVTELALADLTTVEKAQERNVKLVRSGDKDAAKLGELLVQVAACLNEGKP 177 >gi|283783124|ref|YP_003373878.1| GTP-binding protein YchF [Gardnerella vaginalis 409-05] gi|283441932|gb|ADB14398.1| GTP-binding protein YchF [Gardnerella vaginalis 409-05] Length = 362 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILA--------- 211 IGI+GLPN GKST ++TR +YPF T+ PN GIV ++ +LA Sbjct: 5 IGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDHRLPVLAKLVNTEKIV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V A ++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFNDD 110 >gi|239817596|ref|YP_002946506.1| GTP-dependent nucleic acid-binding protein EngD [Variovorax paradoxus S110] gi|239804173|gb|ACS21240.1| GTP-binding protein YchF [Variovorax paradoxus S110] Length = 363 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLDQLSEIVKPERVVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI G++ A G G+G++FL H T +++V +ENV Sbjct: 66 AIVEFVDIAGLVAGASTGEGLGNKFLAHIRETDATVNVVRCFDDENV 112 >gi|212636640|ref|YP_002313165.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella piezotolerans WP3] gi|212558124|gb|ACJ30578.1| GTP-binding protein, putative [Shewanella piezotolerans WP3] Length = 363 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + +++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEASNFPFCTIEPNTGVVPVPDSRLDALAEIVNPERIMP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDD 110 >gi|21230349|ref|NP_636266.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769657|ref|YP_244419.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas campestris pv. campestris str. 8004] gi|21111903|gb|AAM40190.1| GTP-binding protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574989|gb|AAY50399.1| GTP-binding protein [Xanthomonas campestris pv. campestris str. 8004] Length = 363 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 21/105 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK------ 206 GI+GLPN GKST ++T+A A++PF T+ PN+G+V E K Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNELAEIVKPQKLIP 65 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 EF+ DI G++ A G G+G++FL H + H+V E Sbjct: 66 TAVEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFE 108 >gi|260889478|ref|ZP_05900741.1| GTP-binding protein YchF [Leptotrichia hofstadii F0254] gi|260860889|gb|EEX75389.1| GTP-binding protein YchF [Leptotrichia hofstadii F0254] Length = 367 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 27/132 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-------KEGYK------- 206 IGI+GLPN GKST ++T+ + + A+YPF T+ PN+G+V K+ K Sbjct: 4 IGIVGLPNVGKSTLFNAITKTQNAEAANYPFATIEPNVGLVSVPDPRLKDLEKVVNPERT 63 Query: 207 -----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQC 257 EF+ DI G++K A +G G+G++FL + T + +V +++ V+ + Sbjct: 64 VGATVEFV--DIAGLVKGASKGEGLGNQFLSNIRNTAAICQVVRCFDDDNIIHVEGSVDP 121 Query: 258 ILDELSAYNSEL 269 I D + N+EL Sbjct: 122 IRD-IETINAEL 132 >gi|170782735|ref|YP_001711069.1| GTP-dependent nucleic acid-binding protein EngD [Clavibacter michiganensis subsp. sepedonicus] gi|169157305|emb|CAQ02492.1| putative ATP/GTP binding protein [Clavibacter michiganensis subsp. sepedonicus] Length = 357 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 17/103 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 I I+GLPN GKST ++T+ + A+YPF T+ PN+G+V K Sbjct: 5 IAIVGLPNVGKSTLFNALTKNQVLAANYPFATIEPNVGVVNLPDPRLEVLAGLFGSEKIL 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 Y DI GI++ A +G G+G++FL + + +V A Sbjct: 65 YAPVSFVDIAGIVRGASEGEGLGNQFLANIREADAIAQVVRAF 107 >gi|126731981|ref|ZP_01747784.1| translation-associated GTPase [Sagittula stellata E-37] gi|126707513|gb|EBA06576.1| translation-associated GTPase [Sagittula stellata E-37] Length = 361 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 18/107 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G V G K+ Sbjct: 1 MGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGDVAVPDTRLDKLAGIAGSKQI 60 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 I DI G++K A +G G+G++FL + + H++ E++ Sbjct: 61 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIREVDAIAHVLRCFEDD 107 >gi|224061615|ref|XP_002300568.1| predicted protein [Populus trichocarpa] gi|222847826|gb|EEE85373.1| predicted protein [Populus trichocarpa] Length = 394 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 21/136 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IGI+GLPN GKST ++T+ ++PF T+ PN + I E ++ Sbjct: 27 IGIVGLPNVGKSTLFNTLTKMSIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSEV 86 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 + DI G+++ AH G G+G+ FL H + H++ A E+ I+D + Sbjct: 87 SAFLEIHDIAGLVRGAHAGQGLGNSFLSHIRAVDGIFHVLRAFEDPDIIHVDDIVDPVRD 146 Query: 262 LSAYNSELR-KKIEIV 276 L ++ELR K IE + Sbjct: 147 LEVISAELRLKDIEFI 162 >gi|167933081|ref|ZP_02520168.1| translation-associated GTPase [candidate division TM7 single-cell isolate TM7b] Length = 203 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 17/104 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 IGI+GLPN GKST ++T A+YPF T+ PN GIV +LA Sbjct: 7 IGIVGLPNVGKSTTFNALTNNDILAANYPFATIEPNTGIVPVPNPRLEVLAKMYNSNKIL 66 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 DI G++K A +G G+G++FL + + + ++HIV A + Sbjct: 67 PATVTFVDIAGLVKGASKGEGLGNKFLANIRQCNAIVHIVRAFD 110 >gi|126326327|ref|XP_001368232.1| PREDICTED: similar to PTD004 [Monodelphis domestica] Length = 396 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 22/146 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T+++ ++PF T+ PN V F Sbjct: 25 IGIVGLPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDDRFDFLYQYHKPPSKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILD 260 + DI G++K AH G G+G+ FL H + H++ + E++ ++ + + D Sbjct: 85 PAFLNVVDIAGLVKGAHAGQGLGNAFLSHISACDGIFHLMRSFEDDDITHIEGSVDPVRD 144 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDS 286 + + ELR K E + + ID ++ Sbjct: 145 -IEIIHEELRLKDEEMIMPIIDKLEK 169 >gi|117619645|ref|YP_857656.1| GTP-binding protein YchF [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561052|gb|ABK38000.1| GTP-binding protein YchF [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 363 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 24/129 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAAIINPQRVVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V +EN+ A D Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNQFLANIRETEAIGHVVRCFDDENIVHVAGKVSPAD 123 Query: 261 ELSAYNSEL 269 ++ N+EL Sbjct: 124 DIEVINTEL 132 >gi|67458747|ref|YP_246371.1| translation-associated GTPase [Rickettsia felis URRWXCal2] gi|67004280|gb|AAY61206.1| GTP-binding protein YchF [Rickettsia felis URRWXCal2] Length = 365 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 22/108 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNL-------------------GIV 201 +GI+GLPN GKST ++T ++ A+YPF T+ PN G + Sbjct: 5 LGIVGLPNVGKSTLFNALTASQLADAANYPFCTIEPNSSKVLVPDERLQRLANLAGSGKI 64 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y EF+ DI G++K A +G G+G++FL H +LH++ E+ Sbjct: 65 IPSYIEFV--DIAGLVKGASKGEGLGNKFLSHIREVDAILHVLRCFED 110 >gi|167042250|gb|ABZ06981.1| putative TGS domain protein [uncultured marine crenarchaeote HF4000_ANIW93J19] Length = 397 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 22/105 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------EGYK-------- 206 IG++G N GKSTF ++ T +I D+PFTT+ PN+GI + +K Sbjct: 3 IGLLGKANVGKSTFFSAATETPVQIGDFPFTTIQPNVGIAYVSTTCACKHFKINHNNPLC 62 Query: 207 ----EFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 FI L D+ G++ AH+G G+G++FL + +L+H+V Sbjct: 63 VSGIRFIPIKLIDVAGLVPGAHEGKGLGNQFLDDARQADMLIHVV 107 >gi|225024260|ref|ZP_03713452.1| hypothetical protein EIKCOROL_01133 [Eikenella corrodens ATCC 23834] gi|224943285|gb|EEG24494.1| hypothetical protein EIKCOROL_01133 [Eikenella corrodens ATCC 23834] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|113969352|ref|YP_733145.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella sp. MR-4] gi|114046579|ref|YP_737129.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella sp. MR-7] gi|117919461|ref|YP_868653.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella sp. ANA-3] gi|113884036|gb|ABI38088.1| GTP-binding protein YchF [Shewanella sp. MR-4] gi|113888021|gb|ABI42072.1| GTP-binding protein YchF [Shewanella sp. MR-7] gi|117611793|gb|ABK47247.1| GTP-binding protein YchF [Shewanella sp. ANA-3] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 31/153 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVNPQRVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD--- 260 EF+ DI G++ A +G G+G++FL + T + H+V E++ +D Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDDNIVHVANRVDPAR 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++ N+EL L+ +D+++ + ++K Sbjct: 124 DIEVINTEL-------ALADLDSLERAVIRQQK 149 >gi|318061121|ref|ZP_07979842.1| GTP-binding protein YchF [Streptomyces sp. SA3_actG] gi|318080128|ref|ZP_07987460.1| GTP-binding protein YchF [Streptomyces sp. SA3_actF] Length = 362 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------K 202 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDPRLPKLAELFGSARIL 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 +F+ DI GI++ A +G G+G++FL + T + ++ A +++ Sbjct: 65 PATVDFV--DIAGIVRGASEGEGLGNKFLANIRETDAICQVIRAFKDD 110 >gi|310814962|ref|YP_003962926.1| GTP-binding protein YchF [Ketogulonicigenium vulgare Y25] gi|308753697|gb|ADO41626.1| GTP-binding protein YchF [Ketogulonicigenium vulgare Y25] Length = 365 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++TR A + A++PF T+ PN+G V K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLDKLASIASSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + T + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASRGEGLGNQFLHNIRETDAIAHVLRCFED 110 >gi|261363931|ref|ZP_05976814.1| GTP-binding protein YchF [Neisseria mucosa ATCC 25996] gi|288567945|gb|EFC89505.1| GTP-binding protein YchF [Neisseria mucosa ATCC 25996] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|94986591|ref|YP_594524.1| GTP-dependent nucleic acid-binding protein EngD [Lawsonia intracellularis PHE/MN1-00] gi|94730840|emb|CAJ54202.1| predicted GTPase, probable translation factor [Lawsonia intracellularis PHE/MN1-00] Length = 366 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 IGI+GLPN GKST ++T+A+ + A+YPF T+ PN V Sbjct: 5 IGIVGLPNVGKSTLFNALTKAQNAQAANYPFCTIEPNKATVPVPDHRLEEIASIVSPQKV 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 + +FI DI G++K A +G G+G++FL H V+L +V + EN+ Sbjct: 65 IQTTVDFI--DIAGLVKGASKGEGLGNQFLAHIRECSVILQVVRCFDNENI 113 >gi|325135622|gb|EGC58239.1| GTP-binding protein EngD [Neisseria meningitidis M0579] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMVELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|261401572|ref|ZP_05987697.1| GTP-binding protein YchF [Neisseria lactamica ATCC 23970] gi|269208342|gb|EEZ74797.1| GTP-binding protein YchF [Neisseria lactamica ATCC 23970] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|320008793|gb|ADW03643.1| GTP-binding protein YchF [Streptomyces flavogriseus ATCC 33331] Length = 362 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V K Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDPRLDKLAEIFSSQKLL 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI++ A +G G+G++FL + + + ++ A +ENV Sbjct: 65 PATVDFVDIAGIVRGASEGEGLGNKFLANIRESDAICQVIRAFKDENV 112 >gi|225077234|ref|ZP_03720433.1| hypothetical protein NEIFLAOT_02289 [Neisseria flavescens NRL30031/H210] gi|224951378|gb|EEG32587.1| hypothetical protein NEIFLAOT_02289 [Neisseria flavescens NRL30031/H210] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|295838741|ref|ZP_06825674.1| GTP-binding protein YchF [Streptomyces sp. SPB74] gi|302519262|ref|ZP_07271604.1| translation-associated GTPase [Streptomyces sp. SPB78] gi|197697143|gb|EDY44076.1| GTP-binding protein YchF [Streptomyces sp. SPB74] gi|302428157|gb|EFK99972.1| translation-associated GTPase [Streptomyces sp. SPB78] Length = 362 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------K 202 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDPRLPKLAELFGSARIL 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 +F+ DI GI++ A +G G+G++FL + T + ++ A +++ Sbjct: 65 PATVDFV--DIAGIVRGASEGEGLGNKFLANIRETDAICQVIRAFKDD 110 >gi|294668557|ref|ZP_06733654.1| GTP-binding protein YchF [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309520|gb|EFE50763.1| GTP-binding protein YchF [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|308190069|ref|YP_003923000.1| GTP-binding protein [Mycoplasma fermentans JER] gi|319777363|ref|YP_004137014.1| gtp-binding protein ychf [Mycoplasma fermentans M64] gi|238809539|dbj|BAH69329.1| hypothetical protein [Mycoplasma fermentans PG18] gi|307624811|gb|ADN69116.1| GTP-binding protein [Mycoplasma fermentans JER] gi|318038438|gb|ADV34637.1| GTP-binding protein YchF [Mycoplasma fermentans M64] Length = 366 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--------------IVKEGY--- 205 GI+GLPN GKST +++T+ + + ++Y FTT+ PN+ IVK G Sbjct: 6 GIVGLPNVGKSTLFSALTKYQVEASNYAFTTIEPNISSVPLKDPRLYELAKIVKPGRIVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F DI G++K A +G G+G++FL + ++H+V ++ Sbjct: 66 ATFDFVDIAGLVKGASKGEGLGNKFLGNIREVDAVVHVVRCFDD 109 >gi|319940805|ref|ZP_08015144.1| GTP-binding protein YchF [Sutterella wadsworthensis 3_1_45B] gi|319805687|gb|EFW02468.1| GTP-binding protein YchF [Sutterella wadsworthensis 3_1_45B] Length = 364 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ + E + Sbjct: 6 GIVGLPNVGKSTIFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLQKLSEIVKPERIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDEL 262 DI G++ A +G G+G++FL + + HIV ++ V A + L+++ Sbjct: 66 AAVEFVDIAGLVAGASKGEGLGNQFLANIRECDAIAHIVRCFNDDNVVHVAGEVNPLNDI 125 Query: 263 SAYNSEL 269 + N+EL Sbjct: 126 AVINTEL 132 >gi|240127452|ref|ZP_04740113.1| translation-associated GTPase [Neisseria gonorrhoeae SK-93-1035] gi|268685828|ref|ZP_06152690.1| translation-associated GTPase [Neisseria gonorrhoeae SK-93-1035] gi|268626112|gb|EEZ58512.1| translation-associated GTPase [Neisseria gonorrhoeae SK-93-1035] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|261378446|ref|ZP_05983019.1| GTP-binding protein YchF [Neisseria cinerea ATCC 14685] gi|269145230|gb|EEZ71648.1| GTP-binding protein YchF [Neisseria cinerea ATCC 14685] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMVELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|209694366|ref|YP_002262294.1| GTP-dependent nucleic acid-binding protein EngD [Aliivibrio salmonicida LFI1238] gi|208008317|emb|CAQ78469.1| GTP-dependent nucleic acid-binding protein EngD [Aliivibrio salmonicida LFI1238] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL- 210 GI+GLPN GKST ++T+A + A++PF T+ PN G+V K E +L Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDVLAKIVNPERVLP 65 Query: 211 -----ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDD 110 >gi|328884772|emb|CCA58011.1| GTP-binding and nucleic acid-binding protein YchF [Streptomyces venezuelae ATCC 10712] Length = 362 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 22/110 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------K 202 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDARLTKLAEIFSSQRIL 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 +F+ DI GI++ A +G G+G++FL + + + ++ A +ENV Sbjct: 65 PATVDFV--DIAGIVRGASEGEGLGNKFLANIRESDAICQVIRAFKDENV 112 >gi|298370329|ref|ZP_06981645.1| GTP-binding protein YchF [Neisseria sp. oral taxon 014 str. F0314] gi|298281789|gb|EFI23278.1| GTP-binding protein YchF [Neisseria sp. oral taxon 014 str. F0314] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|254671615|emb|CBA09307.1| conserved hypothetical protein [Neisseria meningitidis alpha153] gi|261393184|emb|CAX50802.1| putative GTP-dependent nucleic acid-binding protein EngD [Neisseria meningitidis 8013] gi|325133488|gb|EGC56151.1| GTP-binding protein EngD [Neisseria meningitidis M13399] gi|325204798|gb|ADZ00252.1| GTP-binding protein EngD [Neisseria meningitidis M01-240355] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|241759507|ref|ZP_04757611.1| GTP-binding protein YchF [Neisseria flavescens SK114] gi|241320289|gb|EER56622.1| GTP-binding protein YchF [Neisseria flavescens SK114] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|121634245|ref|YP_974490.1| translation-associated GTPase [Neisseria meningitidis FAM18] gi|304388374|ref|ZP_07370485.1| GTP-binding protein YchF [Neisseria meningitidis ATCC 13091] gi|120865951|emb|CAM09688.1| hypothetical protein NMC0379 [Neisseria meningitidis FAM18] gi|304337640|gb|EFM03798.1| GTP-binding protein YchF [Neisseria meningitidis ATCC 13091] gi|325127542|gb|EGC50466.1| GTP-binding protein EngD [Neisseria meningitidis N1568] gi|325131484|gb|EGC54191.1| GTP-binding protein EngD [Neisseria meningitidis M6190] gi|325137530|gb|EGC60112.1| GTP-binding protein EngD [Neisseria meningitidis ES14902] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|121712800|ref|XP_001274011.1| GTP binding protein (Gtp1), putative [Aspergillus clavatus NRRL 1] gi|119402164|gb|EAW12585.1| GTP binding protein (Gtp1), putative [Aspergillus clavatus NRRL 1] Length = 362 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 57/95 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKSTFL+ +T+ + + A Y FTTL G+++ G E + D+PGII+ Sbjct: 59 ARVALVGFPSVGKSTFLSKITKTRSEAAAYSFTTLTAIPGVLEYGGAEIQILDLPGIIEG 118 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 119 AAEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA 153 >gi|308800268|ref|XP_003074915.1| YchF Nucleic acid binding GTPase, translation factor, putative (IC) [Ostreococcus tauri] gi|116061465|emb|CAL52183.1| YchF Nucleic acid binding GTPase, translation factor, putative (IC) [Ostreococcus tauri] Length = 420 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 21/128 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 GI+GLPN GKST F A V ++ + A++PF T+ PN GIV K Sbjct: 55 GIVGLPNVGKSTLFNALVENSRAQAANFPFCTIEPNFGIVPVSDKRLETLAAISRSSNIV 114 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 + DI G++K A +G G+G++FL + ++H+V ++ I+D + Sbjct: 115 PATVEIVDIAGLVKGASEGEGLGNKFLANIRECDAIVHVVRCFNDDNIVHVNGIVDPRRD 174 Query: 262 LSAYNSEL 269 + N+EL Sbjct: 175 AAIINTEL 182 >gi|15677674|ref|NP_274835.1| translation-associated GTPase [Neisseria meningitidis MC58] gi|218767578|ref|YP_002342090.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria meningitidis Z2491] gi|7227093|gb|AAF42173.1| putative GTP-binding protein [Neisseria meningitidis MC58] gi|121051586|emb|CAM07884.1| hypothetical protein NMA0618 [Neisseria meningitidis Z2491] gi|316984450|gb|EFV63423.1| GTP-dependent nucleic acid-binding protein engD [Neisseria meningitidis H44/76] gi|325139656|gb|EGC62195.1| GTP-binding protein EngD [Neisseria meningitidis CU385] gi|325197660|gb|ADY93116.1| GTP-binding protein EngD [Neisseria meningitidis G2136] gi|325200898|gb|ADY96353.1| GTP-binding protein EngD [Neisseria meningitidis H44/76] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|254804334|ref|YP_003082555.1| predicted GTPase translation factor [Neisseria meningitidis alpha14] gi|254667876|emb|CBA03961.1| predicted GTPase translation factor [Neisseria meningitidis alpha14] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|31792305|ref|NP_854798.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium bovis AF2122/97] gi|121637043|ref|YP_977266.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989516|ref|YP_002644203.1| translation-associated GTPase [Mycobacterium bovis BCG str. Tokyo 172] gi|260204356|ref|ZP_05771847.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium tuberculosis K85] gi|289573765|ref|ZP_06453992.1| GTP binding protein [Mycobacterium tuberculosis K85] gi|31617893|emb|CAD94003.1| Probable GTP binding protein [Mycobacterium bovis AF2122/97] gi|121492690|emb|CAL71159.1| Probable GTP binding protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772629|dbj|BAH25435.1| translation-associated GTPase [Mycobacterium bovis BCG str. Tokyo 172] gi|289538196|gb|EFD42774.1| GTP binding protein [Mycobacterium tuberculosis K85] Length = 357 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 17/89 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 +GI+GLPN GKST ++TR A+YPF T+ PN G+V G + + Sbjct: 5 LGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGSQRVV 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKH 233 A DI G+IK A +GAG+G++FL H Sbjct: 65 PAPVTFVDIAGLIKGASEGAGLGNKFLAH 93 >gi|325143737|gb|EGC66054.1| GTP-binding protein EngD [Neisseria meningitidis M01-240013] gi|325206753|gb|ADZ02206.1| GTP-binding protein EngD [Neisseria meningitidis M04-240196] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|325129577|gb|EGC52401.1| GTP-binding protein EngD [Neisseria meningitidis OX99.30304] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|308389941|gb|ADO32261.1| translation-associated GTPase [Neisseria meningitidis alpha710] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|239979632|ref|ZP_04702156.1| translation-associated GTPase [Streptomyces albus J1074] gi|291451496|ref|ZP_06590886.1| translation-associated GTPase [Streptomyces albus J1074] gi|291354445|gb|EFE81347.1| translation-associated GTPase [Streptomyces albus J1074] Length = 362 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 22/110 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA---------- 211 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V G + LA Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVV--GVPDPRLAKLAEIFGSAK 62 Query: 212 ---------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI++ A +G G+G++FL + + + ++ A +ENV Sbjct: 63 ILPATVDFVDIAGIVRGASEGEGLGNKFLANIRESDAICQVIRAFKDENV 112 >gi|261379951|ref|ZP_05984524.1| GTP-binding protein YchF [Neisseria subflava NJ9703] gi|284797149|gb|EFC52496.1| GTP-binding protein YchF [Neisseria subflava NJ9703] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|172087678|ref|YP_204145.2| GTP-binding protein [Vibrio fischeri ES114] gi|197334612|ref|YP_002155523.1| GTP-binding protein YchF [Vibrio fischeri MJ11] gi|171902271|gb|AAW85257.2| predicted GTP-binding protein [Vibrio fischeri ES114] gi|197316102|gb|ACH65549.1| GTP-binding protein YchF [Vibrio fischeri MJ11] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL- 210 GI+GLPN GKST ++T+A + A++PF T+ PN G+V K E IL Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVKPERILP 65 Query: 211 -----ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 DI G++ A +G G+G++FL + T + H+V E EN+ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENI 112 >gi|325201517|gb|ADY96971.1| GTP-binding protein EngD [Neisseria meningitidis M01-240149] gi|325207496|gb|ADZ02948.1| GTP-binding protein EngD [Neisseria meningitidis NZ-05/33] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|319409840|emb|CBY90149.1| putative GTP-dependent nucleic acid-binding protein EngD [Neisseria meningitidis WUE 2594] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|255066570|ref|ZP_05318425.1| GTP-binding protein YchF [Neisseria sicca ATCC 29256] gi|255049154|gb|EET44618.1| GTP-binding protein YchF [Neisseria sicca ATCC 29256] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|157376599|ref|YP_001475199.1| translation-associated GTPase [Shewanella sediminis HAW-EB3] gi|157318973|gb|ABV38071.1| GTP-binding protein YchF [Shewanella sediminis HAW-EB3] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + +++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEASNFPFCTIEPNTGVVPVPDARLDALAEIVNPERILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDD 110 >gi|319405257|emb|CBI78868.1| GTP-binding protein [Bartonella sp. AR 15-3] Length = 367 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 19/108 (17%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTATAQAANYPFCTIEPNTGEVAVPDPRMKKIASIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 DI G+++ A +G G+G++FL + ++HI+ + EN+ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAIIHILRCFQDENI 113 >gi|319639343|ref|ZP_07994094.1| GTP-binding protein [Neisseria mucosa C102] gi|317399527|gb|EFV80197.1| GTP-binding protein [Neisseria mucosa C102] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|309378315|emb|CBX23061.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|296315350|ref|ZP_06865291.1| GTP-binding protein YchF [Neisseria polysaccharea ATCC 43768] gi|296837700|gb|EFH21638.1| GTP-binding protein YchF [Neisseria polysaccharea ATCC 43768] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|259155172|ref|NP_001158828.1| obg-like ATPase 1 [Salmo salar] gi|223647610|gb|ACN10563.1| Obg-like ATPase 1 [Salmo salar] Length = 397 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IGI+GLPN GKSTF +T+++ ++PF T+ PN + I E Y Sbjct: 24 IGIVGLPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPIPDERYDYLCTFHKPLSKV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G++K AH G G+G+ FL H + H+ A E+ Sbjct: 84 PAFLNVVDIAGLVKGAHAGQGLGNAFLSHISACDGIFHMTRAFED 128 >gi|169628359|ref|YP_001702008.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium abscessus ATCC 19977] gi|169240326|emb|CAM61354.1| Probable GTP binding protein [Mycobacterium abscessus] Length = 357 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 ++GI+GLPN GKST ++TR A+YPF T+ PN G+V + Sbjct: 4 NLGIVGLPNVGKSTLFNALTRNNVLAANYPFATIEPNEGVVPLPDPRLDKLAEVFGSART 63 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +GAG+G++FL + + +V ++ Sbjct: 64 LPATVTFVDIAGIVKGASEGAGLGNKFLANIRECDAICQVVRVFADD 110 >gi|161723845|ref|NP_360565.2| translation-associated GTPase [Rickettsia conorii str. Malish 7] gi|229586946|ref|YP_002845447.1| GTP-dependent nucleic acid-binding protein EngD [Rickettsia africae ESF-5] gi|228021996|gb|ACP53704.1| GTP-binding protein YchF [Rickettsia africae ESF-5] Length = 365 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 22/108 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNL-------------------GIV 201 +GI+GLPN GKST ++T ++ A+YPF T+ PN G + Sbjct: 5 LGIVGLPNVGKSTLFNALTASQAADAANYPFCTIEPNSSKVLVPDARLHKLASLAGSGKI 64 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y EF+ DI G++K A +G G+G++FL H +LH++ E+ Sbjct: 65 IPSYIEFV--DIAGLVKGASKGEGLGNKFLSHIREVDAILHVLRCFED 110 >gi|161869377|ref|YP_001598544.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria meningitidis 053442] gi|161594930|gb|ABX72590.1| GTP-binding protein, putative [Neisseria meningitidis 053442] Length = 363 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|325141641|gb|EGC64103.1| GTP-binding protein EngD [Neisseria meningitidis 961-5945] Length = 363 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|300858163|ref|YP_003783146.1| hypothetical protein cpfrc_00745 [Corynebacterium pseudotuberculosis FRC41] gi|300685617|gb|ADK28539.1| hypothetical protein cpfrc_00745 [Corynebacterium pseudotuberculosis FRC41] gi|302205885|gb|ADL10227.1| Putative GTP-dependent nucleic acid-binding protein EngD [Corynebacterium pseudotuberculosis C231] gi|302330442|gb|ADL20636.1| Putative GTP-binding protein YchF [Corynebacterium pseudotuberculosis 1002] gi|308276120|gb|ADO26019.1| Putative GTP-binding protein YchF [Corynebacterium pseudotuberculosis I19] Length = 361 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY-KEFIL 210 +GI+GLPN GKST ++TR A+YPF T+ PN+G+V+ E + E IL Sbjct: 5 LGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGLVELPDVRLTRLAEIFGSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G+ FL + + +V A ++ Sbjct: 65 PATVSFVDIAGIVKGASEGEGMGNAFLANIREADAICQVVRAFADD 110 >gi|169612457|ref|XP_001799646.1| hypothetical protein SNOG_09351 [Phaeosphaeria nodorum SN15] gi|160702513|gb|EAT83543.2| hypothetical protein SNOG_09351 [Phaeosphaeria nodorum SN15] Length = 352 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 56/93 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ VT+ K + A Y FTTL G+++ G E + D+PGII+ Sbjct: 42 ARIALVGFPSVGKSTFLSRVTKTKSEAASYAFTTLTAIPGVLEYGGAEIQVLDLPGIIEG 101 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A +G G G + + + + ++ I+ A ++ Q Sbjct: 102 AAEGKGRGRQVISAAKTSDLICMILDATKKAEQ 134 >gi|159043506|ref|YP_001532300.1| GTP-dependent nucleic acid-binding protein EngD [Dinoroseobacter shibae DFL 12] gi|157911266|gb|ABV92699.1| GTP-binding protein YchF [Dinoroseobacter shibae DFL 12] Length = 365 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++TR A + A++PF T+ PN+G V G K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDPRLDRLAEIAGSKQV 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIREVDAIAHVLRCFED 110 >gi|294142160|ref|YP_003558138.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella violacea DSS12] gi|293328629|dbj|BAJ03360.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella violacea DSS12] Length = 363 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 20/127 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + +++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEASNFPFCTIEPNTGVVPVPDARLDALAEIVNPERVLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDEL 262 DI G++ A +G G+G++FL + T + H+V E EN+ I +++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDENIVHVANKISPAEDI 125 Query: 263 SAYNSEL 269 N+EL Sbjct: 126 EVINTEL 132 >gi|313669061|ref|YP_004049345.1| hypothetical protein NLA_17840 [Neisseria lactamica ST-640] gi|313006523|emb|CBN87987.1| conserved hypothetical protein [Neisseria lactamica 020-06] Length = 363 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|238650662|ref|YP_002916514.1| translation-associated GTPase [Rickettsia peacockii str. Rustic] gi|238624760|gb|ACR47466.1| translation-associated GTPase [Rickettsia peacockii str. Rustic] Length = 365 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 22/108 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNL-------------------GIV 201 +GI+GLPN GKST ++T ++ A+YPF T+ PN G + Sbjct: 5 LGIVGLPNVGKSTLFNALTASQAADAANYPFCTIEPNSSKVLVPDARLHTLASLAGSGKI 64 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y EF+ DI G++K A +G G+G++FL H +LH++ E+ Sbjct: 65 IPSYIEFV--DIAGLVKGASKGEGLGNKFLSHIREVDAILHVLRCFED 110 >gi|126665171|ref|ZP_01736154.1| translation-associated GTPase [Marinobacter sp. ELB17] gi|126630541|gb|EBA01156.1| translation-associated GTPase [Marinobacter sp. ELB17] Length = 363 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 31/147 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T+ PN G+V Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAGIGAENFPFCTIEPNAGVVAMPDPRLTKLAEIVKPQRV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-NVQAAYQCI-- 258 EF+ DI G++ A +G G+G++FL + +T + H+V ++ NV + Sbjct: 64 VPTTMEFV--DIAGLVAGASKGEGLGNQFLANIRQTEAIAHVVRCFDDSNVIHVSNKVDP 121 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTVD 285 D++ N+EL L+ +DTV+ Sbjct: 122 ADDIEVINTEL-------ALADMDTVE 141 >gi|119498405|ref|XP_001265960.1| GTP binding protein (Gtp1), putative [Neosartorya fischeri NRRL 181] gi|119414124|gb|EAW24063.1| GTP binding protein (Gtp1), putative [Neosartorya fischeri NRRL 181] Length = 362 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 57/95 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKSTFL+ +T+ + + A Y FTTL G+++ G E + D+PGII+ Sbjct: 59 ARVALVGFPSVGKSTFLSKITKTRSEAAAYSFTTLTAIPGVLEYGGAEIQILDLPGIIEG 118 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 119 AAEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA 153 >gi|330828695|ref|YP_004391647.1| putative GTP-binding protein with nucleoside triP hydrolase domain [Aeromonas veronii B565] gi|328803831|gb|AEB49030.1| Putative GTP-binding protein with nucleoside triP hydrolase domain [Aeromonas veronii B565] Length = 363 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 24/129 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAAIINPQRVVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V +EN+ A D Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNQFLANIRETEAIGHVVRCFDDENIIHVAGKVSPAD 123 Query: 261 ELSAYNSEL 269 ++ N+EL Sbjct: 124 DIEVINTEL 132 >gi|172040303|ref|YP_001800017.1| GTP-dependent nucleic acid-binding protein EngD [Corynebacterium urealyticum DSM 7109] gi|171851607|emb|CAQ04583.1| putative GTP-binding protein [Corynebacterium urealyticum DSM 7109] Length = 361 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY-KEFIL 210 +GI+GLPN GKST ++TR A+YPF T+ PN G+V+ E Y E IL Sbjct: 5 LGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNEGLVELPDPRLDRLAEIYGSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G+ FL + + +V A ++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGMGNAFLANIREADAICQVVRAFTDD 110 >gi|152997609|ref|YP_001342444.1| GTP-dependent nucleic acid-binding protein EngD [Marinomonas sp. MWYL1] gi|150838533|gb|ABR72509.1| GTP-binding protein YchF [Marinomonas sp. MWYL1] Length = 363 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 31/156 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T+A ++PF T+ PN G+V + E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAGIGAENFPFCTIEPNAGVVAMPDPRLDALAEIVKPERV 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILDEL 262 DI G+++ A +G G+G++FL + T + H+V E ENV + +L Sbjct: 64 LATTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNHVNPKL 123 Query: 263 SAYNSELRKKIEIVGL----SQIDTVDSDTLARKKN 294 IE++ L + I+++D KN Sbjct: 124 D---------IEVINLELIFADIESIDKQLFRTAKN 150 >gi|296327680|ref|ZP_06870222.1| GTP-binding protein YchF [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155211|gb|EFG95986.1| GTP-binding protein YchF [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 364 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 37/160 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------------------ 202 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V Sbjct: 4 IGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNVGVVTVPDERLNELAKIINPQKI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI-- 258 EFI DI G++K A +G G G++FL + T + +V ++N+ + Sbjct: 64 VPATVEFI--DIAGLVKGASKGEGRGNKFLSNIRSTSAICQVVRCFDDDNITHVDGSVDP 121 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTVDS-----DTLARKK 293 L ++ N+EL + I+T+D + LAR K Sbjct: 122 LRDIDVINTELI-------FADIETIDKAIEKHEKLARNK 154 >gi|313682692|ref|YP_004060430.1| GTP-binding protein ychf [Sulfuricurvum kujiense DSM 16994] gi|313155552|gb|ADR34230.1| GTP-binding protein YchF [Sulfuricurvum kujiense DSM 16994] Length = 366 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 18/120 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-----------------KE 203 IG++GLPN GKST ++T+A+ + A+YPF T+ PN V + Sbjct: 5 IGLVGLPNVGKSTTFNALTKAQNAEAANYPFCTIEPNKATVPVPDIRLTELAKIVNPERI 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 + DI G++K A +G G+G++FL + T V+L IV ++ + +D LS Sbjct: 65 QHSTLDFVDIAGLVKGASKGEGLGNKFLSNIRETEVILQIVRCFDDENIVHTEGRIDPLS 124 >gi|19704700|ref|NP_604262.1| GTP-dependent nucleic acid-binding protein EngD [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19715014|gb|AAL95561.1| GTP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 364 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 37/160 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------------------ 202 IGI+GLPN GKST ++T+A + A+YPF T+ PN+G+V Sbjct: 4 IGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNVGVVTVPDERLNELAKIINPQKI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI-- 258 EFI DI G++K A +G G G++FL + T + +V ++N+ + Sbjct: 64 VPATVEFI--DIAGLVKGASKGEGRGNKFLSNIRSTSAICQVVRCFDDDNITHVDGSVDP 121 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTVDS-----DTLARKK 293 L ++ N+EL + I+T+D + LAR K Sbjct: 122 LRDIDVINTELI-------FADIETIDKAIEKHEKLARNK 154 >gi|14590427|ref|NP_142493.1| translation-associated GTPase [Pyrococcus horikoshii OT3] gi|3256930|dbj|BAA29613.1| 397aa long hypothetical GTP-binding protein [Pyrococcus horikoshii OT3] Length = 397 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 24/110 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------------KEG 204 +IG++G PN GKSTF ++ T +IA+YPFTT+ N+G+ + Sbjct: 2 EIGVVGKPNVGKSTFFSAATLVDVEIANYPFTTIEANVGVTYAITDHPCKELGCSPNPQN 61 Query: 205 YK--------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 Y+ + D+ G++ AH+G G+G++FL L+H+V A Sbjct: 62 YEYRNGLALIPVKMVDVAGLVPGAHEGRGLGNKFLDDLRMASALIHVVDA 111 >gi|70998468|ref|XP_753956.1| GTP binding protein (Gtp1) [Aspergillus fumigatus Af293] gi|66851592|gb|EAL91918.1| GTP binding protein (Gtp1), putative [Aspergillus fumigatus Af293] gi|159126311|gb|EDP51427.1| GTP binding protein (Gtp1), putative [Aspergillus fumigatus A1163] Length = 362 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 57/95 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKSTFL+ +T+ + + A Y FTTL G+++ G E + D+PGII+ Sbjct: 59 ARVALVGFPSVGKSTFLSKITKTRSEAAAYSFTTLTAIPGVLEYGGAEIQILDLPGIIEG 118 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + + ++L ++ A + Q A Sbjct: 119 AAEGKGRGRQVISAAKTSDLILMVLDATKRAEQRA 153 >gi|86742550|ref|YP_482950.1| GTP-dependent nucleic acid-binding protein EngD [Frankia sp. CcI3] gi|86569412|gb|ABD13221.1| conserved hypothetical protein [Frankia sp. CcI3] Length = 358 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 17/100 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI+GLPN GKST ++TR + A+YPF T+ PN+G+V + Sbjct: 5 IGIVGLPNVGKSTLFNALTRNEVLAANYPFATIEPNVGVVGVPDPRLGELAKLYDSARTV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI G+++ A +G G+G+RFL + + + +V Sbjct: 65 PATVSFVDIAGLVRGASEGQGLGNRFLANIRESDAVCQVV 104 >gi|300934055|ref|ZP_07149311.1| GTP-dependent nucleic acid-binding protein EngD [Corynebacterium resistens DSM 45100] Length = 370 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 36/175 (20%) Query: 151 IIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------- 203 ++++ L L GI+GLPN GKST ++TR A+YPF T+ PN+G+V+ Sbjct: 1 MVYVTLTL----GIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGLVELPDPRLNR 56 Query: 204 -----GYKEFILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA 253 G + + A DI GI+K A G G+G+ FL + + +V A ++ Sbjct: 57 LAEIFGSERVLPATVSFVDIAGIVKGASDGEGMGNAFLANIREADAICQVVRAFSDDNVI 116 Query: 254 AYQCILD---ELSAYNSELRKKIEIVGLSQIDTVDS-----DTLARKKNELATQC 300 +D ++S +EL L+ + TV+ + ARK ELA Q Sbjct: 117 HVDGRVDPQADISVIETELI-------LADLQTVEKALPRLEKEARKNKELAEQV 164 >gi|257094307|ref|YP_003167948.1| GTP-binding protein YchF [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046831|gb|ACV36019.1| GTP-binding protein YchF [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 363 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VKE 203 GI+GLPN GKST ++T+A +YPF T+ PN+GI V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLAQLAAIVKPQRVQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL + T ++ +V E+ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIVSVVRCFED 109 >gi|158312713|ref|YP_001505221.1| GTP-dependent nucleic acid-binding protein EngD [Frankia sp. EAN1pec] gi|158108118|gb|ABW10315.1| GTP-binding protein YchF [Frankia sp. EAN1pec] Length = 358 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 21/102 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA---------- 211 IGI+GLPN GKST ++TR + A+YPF T+ PN+G+V G + LA Sbjct: 5 IGIVGLPNVGKSTLFNALTRNEVLAANYPFATIEPNVGVV--GVPDPRLAKLGEVFSSAR 62 Query: 212 ---------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI G+++ A +G G+G+RFL + + + +V Sbjct: 63 VVPATVSFVDIAGLVRGASEGQGLGNRFLANIRESDAICQVV 104 >gi|50553516|ref|XP_504169.1| YALI0E20009p [Yarrowia lipolytica] gi|49650038|emb|CAG79764.1| YALI0E20009p [Yarrowia lipolytica] Length = 406 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IGI+G P++GKST L S+T A K +PFTT+ PN Sbjct: 7 IGIVGKPSSGKSTTLNSLTDATAKTGSFPFTTIDPNKATGYLQIDCACARFKVQEKCKPN 66 Query: 198 LGIVKEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G K+G + +L D+ G++ AHQG G+G++FL L+H+V Sbjct: 67 YGTCKDGRRFVPIMLLDVAGLVPGAHQGRGLGNKFLDDLRHADALIHVV 115 >gi|297851506|ref|XP_002893634.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata] gi|297339476|gb|EFH69893.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata] Length = 394 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 22/145 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKE---- 207 IGI+GLPN GKST ++T+ ++PF T+ PN V + YK Sbjct: 27 IGIVGLPNVGKSTLFNTLTKLSIPAENFPFCTIEPNEARVNIPDERFDWLCQTYKPKSEI 86 Query: 208 --FI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENV---QAAYQCILDE 261 F+ + DI G+++ AH+G G+G+ FL H + H++ A E+ + + Sbjct: 87 PAFLEIHDIAGLVRGAHEGQGLGNNFLSHIRAVDGIFHVLRAFEDADIIHVDDVVDPVRD 146 Query: 262 LSAYNSELR-KKIEIVGLSQIDTVD 285 L ELR K IE VG +ID V+ Sbjct: 147 LETITEELRLKDIEFVG-KKIDDVE 170 >gi|146328826|ref|YP_001210191.1| GTP-binding protein [Dichelobacter nodosus VCS1703A] gi|146232296|gb|ABQ13274.1| GTP-binding protein [Dichelobacter nodosus VCS1703A] Length = 363 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 21/109 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A +YPF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTQAGVDAQNYPFCTIDPNTGIVHVPDPRLQALANIVNPARI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL H T + +V E++ Sbjct: 64 VPATMEFV--DIAGLVAGASRGEGLGNQFLAHIRETDAIAQVVRCFEDH 110 >gi|15789732|ref|NP_279556.1| translation-associated GTPase [Halobacterium sp. NRC-1] gi|169235447|ref|YP_001688647.1| translation-associated GTPase [Halobacterium salinarum R1] gi|10580108|gb|AAG19036.1| GTP-binding protein homolog [Halobacterium sp. NRC-1] gi|167726513|emb|CAP13298.1| putative GTP-binding protein [Halobacterium salinarum R1] Length = 393 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 22/107 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 I + G PNAGKSTF + TR++ +A+YPFTT+ N G+ Sbjct: 4 IALAGKPNAGKSTFYTAATRSEVDVANYPFTTIDANRGVTHVRTACPCLTREERCGHEHC 63 Query: 203 ---EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 + Y L D+ G++ AH+G G+G++FL V++++V A Sbjct: 64 HDGKRYVPVELLDVAGLVPGAHEGRGLGNQFLDELSNADVIVNVVDA 110 >gi|330931148|ref|XP_003303285.1| hypothetical protein PTT_15443 [Pyrenophora teres f. teres 0-1] gi|311320806|gb|EFQ88625.1| hypothetical protein PTT_15443 [Pyrenophora teres f. teres 0-1] Length = 368 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 56/93 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ VT+ K + A Y FTTL G+++ G E + D+PGII+ Sbjct: 65 ARIALVGFPSVGKSTFLSRVTKTKSEAASYAFTTLTAIPGVLEYGGAEIQVLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A +G G G + + + + ++ I+ A ++ Q Sbjct: 125 AAEGKGRGRQVISAAKTSDLICMILDATKKAEQ 157 >gi|239918104|ref|YP_002957662.1| GTP-binding conserved hypothetical protein TIGR00650 [Micrococcus luteus NCTC 2665] gi|281415712|ref|ZP_06247454.1| GTP-dependent nucleic acid-binding protein EngD [Micrococcus luteus NCTC 2665] gi|239839311|gb|ACS31108.1| GTP-binding conserved hypothetical protein TIGR00650 [Micrococcus luteus NCTC 2665] Length = 354 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 17/102 (16%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFILA- 211 +GLPN GKST ++TR A+YPF T+ PN+G+V G + + A Sbjct: 1 MGLPNVGKSTLFNALTRQTVLAANYPFATIEPNVGVVNLPDERLPQLAEIFGSERILPAT 60 Query: 212 ----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI+K A +G G+G++FL + H + +V A ++ Sbjct: 61 VSFVDIAGIVKGASEGEGLGNQFLANIREAHAIAQVVRAFDD 102 >gi|126463250|ref|YP_001044364.1| GTP-dependent nucleic acid-binding protein EngD [Rhodobacter sphaeroides ATCC 17029] gi|126104914|gb|ABN77592.1| GTP-binding protein YchF [Rhodobacter sphaeroides ATCC 17029] Length = 365 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++TR A + A++PF T+ PN+G V G K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLEILAEIAGSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G+++ A +G G+G++FL + + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVRGASKGEGLGNQFLANIRECDAIAHVLRCFED 110 >gi|221640299|ref|YP_002526561.1| GTP-dependent nucleic acid-binding protein EngD [Rhodobacter sphaeroides KD131] gi|221161080|gb|ACM02060.1| GTP-binding protein YchF [Rhodobacter sphaeroides KD131] Length = 375 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++TR A + A++PF T+ PN+G V G K+ Sbjct: 15 MGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLEILAEIAGSKQI 74 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G+++ A +G G+G++FL + + H++ E+ Sbjct: 75 IPTRMTFVDIAGLVRGASKGEGLGNQFLANIRECDAIAHVLRCFED 120 >gi|328954891|ref|YP_004372224.1| GTP-binding protein YchF [Coriobacterium glomerans PW2] gi|328455215|gb|AEB06409.1| GTP-binding protein YchF [Coriobacterium glomerans PW2] Length = 354 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 21/108 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V Sbjct: 5 IGIVGLPNVGKSTLFTALTKKGGLAANYPFATIDPNVGVVDVPDDRLDRLAKIARPGRIV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A++G G+G++FL + T + +V +++ Sbjct: 65 PATVEFV--DIAGLVKGANEGEGLGNQFLANIRETDAICEVVRYFKDD 110 >gi|255564375|ref|XP_002523184.1| GTP-dependent nucleic acid-binding protein engD, putative [Ricinus communis] gi|223537591|gb|EEF39215.1| GTP-dependent nucleic acid-binding protein engD, putative [Ricinus communis] Length = 394 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------------KEGY 205 IGI+GLPN GKST ++T+ ++PF T+ PN V K Sbjct: 27 IGIVGLPNVGKSTLFNTLTKLSIPAENFPFCTIEPNEARVNIPDERFDWLCQLYKPKSEV 86 Query: 206 KEFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F+ + DI G+++ AHQG G+G+ FL H + H++ A E+ Sbjct: 87 SAFLEIHDIAGLVRGAHQGQGLGNNFLSHIRAVDGIFHVLRAFED 131 >gi|84515246|ref|ZP_01002608.1| GTP-binding protein YchF [Loktanella vestfoldensis SKA53] gi|84510529|gb|EAQ06984.1| GTP-binding protein YchF [Loktanella vestfoldensis SKA53] Length = 365 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 18/107 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G V G K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGDVAVPDARLDKLAAIAGSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 I DI G++K A +G G+G++FL + + H++ E++ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIRECDAIAHVLRCFEDD 111 >gi|188992869|ref|YP_001904879.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas campestris pv. campestris str. B100] gi|167734629|emb|CAP52839.1| GTP-binding protein [Xanthomonas campestris pv. campestris] Length = 385 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 21/105 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK------ 206 GI+GLPN GKST ++T+A A++PF T+ PN+G+V E K Sbjct: 28 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLNELAEIVKPQKLIP 87 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 EF+ DI G++ A G G+G++FL H + H+V E Sbjct: 88 TAVEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFE 130 >gi|124485449|ref|YP_001030065.1| translation-associated GTPase [Methanocorpusculum labreanum Z] gi|124362990|gb|ABN06798.1| GTP-binding protein, HSR1-related protein [Methanocorpusculum labreanum Z] Length = 390 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 21/106 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 I + G PN GKSTF S+T A IA+YPFTT+ PN G+ EG E I Sbjct: 4 IALAGKPNCGKSTFYKSLTLANVDIANYPFTTVNPNKGVAYVRTRCPCKELGIEGCTECI 63 Query: 210 ---------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 L D+ G++ +AH G G+G++FL ++ +V A Sbjct: 64 DGNRFIPVELIDVAGLVPDAHLGRGLGNQFLDTLREADAIIQVVDA 109 >gi|77464409|ref|YP_353913.1| GTP-dependent nucleic acid-binding protein EngD [Rhodobacter sphaeroides 2.4.1] gi|332559299|ref|ZP_08413621.1| GTP-binding protein YchF [Rhodobacter sphaeroides WS8N] gi|77388827|gb|ABA80012.1| Putative GTP-binding protein [Rhodobacter sphaeroides 2.4.1] gi|332277011|gb|EGJ22326.1| GTP-binding protein YchF [Rhodobacter sphaeroides WS8N] Length = 365 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++TR A + A++PF T+ PN+G V G K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLEILAEIAGSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G+++ A +G G+G++FL + + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVRGASKGEGLGNQFLANIRECDAIAHVLRCFED 110 >gi|68536530|ref|YP_251235.1| translation-associated GTPase [Corynebacterium jeikeium K411] gi|68264129|emb|CAI37617.1| putative GTP-binding protein [Corynebacterium jeikeium K411] Length = 361 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK-EFIL 210 +GI+GLPN GKST ++TR A+YPF T+ PN+G+V+ E ++ E IL Sbjct: 5 LGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGLVELPDPRLTRLAEIFESERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A G G+G+ FL + + +V A ++ Sbjct: 65 PATVSFVDIAGIVKGASDGEGMGNAFLANIREADAICQVVRAFSDD 110 >gi|326381379|ref|ZP_08203073.1| GTP-binding protein YchF [Gordonia neofelifaecis NRRL B-59395] gi|326199626|gb|EGD56806.1| GTP-binding protein YchF [Gordonia neofelifaecis NRRL B-59395] Length = 359 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY-KEFIL 210 +GI+GLPN GKST ++TR A+YPF T+ PN+G+V+ E + E IL Sbjct: 5 LGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGVVELPDARLDRLAEIFGSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + +V ++ Sbjct: 65 PAVVSFVDIAGIVKGASEGEGMGNQFLANIREADAICQVVRVFADD 110 >gi|225551952|ref|ZP_03772892.1| GTP-binding protein YchF [Borrelia sp. SV1] gi|225370950|gb|EEH00380.1| GTP-binding protein YchF [Borrelia sp. SV1] Length = 368 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST +S+T + +IA+YPF T+ PN+GIV+ Sbjct: 6 GIVGLPNVGKSTLFSSLTSSNVEIANYPFCTIEPNIGIVEIPDERLLKISECIVPRKIIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A G G+G++FL + +++H+V EE Sbjct: 66 AVMEFV--DIAGLVKGASTGEGLGNKFLANIREVSLIVHVVRCFEE 109 >gi|49475911|ref|YP_033952.1| translation-associated GTPase [Bartonella henselae str. Houston-1] gi|49238719|emb|CAF27971.1| GTP-binding protein [Bartonella henselae str. Houston-1] Length = 367 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTATAQAANYPFCTIEPNTGEVAVPDLRMEKIASIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ +++ Sbjct: 66 PTRINFVDIAGLVRGASKGEGLGNKFLANIREVDAIIHVLRCFQDD 111 >gi|120597882|ref|YP_962456.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella sp. W3-18-1] gi|146293946|ref|YP_001184370.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella putrefaciens CN-32] gi|120557975|gb|ABM23902.1| GTP-binding protein YchF [Shewanella sp. W3-18-1] gi|145565636|gb|ABP76571.1| GTP-binding protein YchF [Shewanella putrefaciens CN-32] gi|319427323|gb|ADV55397.1| GTP-binding protein YchF [Shewanella putrefaciens 200] Length = 363 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 31/153 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVNPQRVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD--- 260 EF+ DI G++ A +G G+G++FL + T + H+V +++ +D Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFDDDNIVHVANKVDPAG 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++ N+EL L+ +D+++ L ++K Sbjct: 124 DIEVINTEL-------ALADLDSLERAVLRQQK 149 >gi|313678567|ref|YP_004056307.1| GTP-binding protein YchF [Mycoplasma bovis PG45] gi|312950613|gb|ADR25208.1| GTP-binding protein YchF [Mycoplasma bovis PG45] Length = 367 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------- 209 GI+GLPN GKST +++T+ + + ++Y FTT+ PN+ V + I Sbjct: 6 GIVGLPNVGKSTLFSALTKHQVEASNYAFTTIDPNISSVALKDQRLIELAKIVNPSKIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 DI G++K A +G G+G++FL + ++H+V E Sbjct: 66 ATFDFVDIAGLVKGASKGEGLGNKFLSNIREVDAIIHVVRCFE 108 >gi|312132127|ref|YP_003999467.1| gtp-binding protein ychf [Leadbetterella byssophila DSM 17132] gi|311908673|gb|ADQ19114.1| GTP-binding protein YchF [Leadbetterella byssophila DSM 17132] Length = 367 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASV-TRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------ 209 GI+GLPN GKST +V T AK + ++Y F T+ PN+G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNAVSTSAKAQASNYRFCTIDPNVGLVDVPDTRLDQLAELVNPNRVV 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + ++H+V E++ Sbjct: 66 PTQIEIVDIAGLVKGASRGEGLGNKFLGNIREVDAIIHVVRCFEDD 111 >gi|309390336|gb|ADO78216.1| GTP-binding protein YchF [Halanaerobium praevalens DSM 2228] Length = 363 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 22/110 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 IGI+GLPN GKST ++T A +YPF T+ PN+G+V Y+ Sbjct: 3 IGIVGLPNVGKSTLFNALTEAGADAQNYPFCTIDPNVGVVPVPDERLDWLAAKYETESKT 62 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G+++ A +G G+G++FL H + +V +EN+ Sbjct: 63 PTVIEFV--DIAGLVEGASRGEGLGNKFLAHIREVDAIAQVVRCFDDENI 110 >gi|296284043|ref|ZP_06862041.1| GTP-dependent nucleic acid-binding protein EngD [Citromicrobium bathyomarinum JL354] Length = 366 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------KEG 204 GI+GLPN GKST ++T+ + + A+YPF T+ PN+G V K Sbjct: 6 GIVGLPNVGKSTLFNALTQTQAAQAANYPFCTIEPNVGQVAVPDDRLDKIAAIGGSAKII 65 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + + DI G++K A +G G+G++FL + ++H++ E++ Sbjct: 66 HTQLAFVDIAGLVKGASKGEGLGNQFLANIREVDAIVHVLRCFEDD 111 >gi|315185339|gb|EFU19113.1| GTP-binding protein YchF [Spirochaeta thermophila DSM 6578] Length = 369 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 21/108 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST +++T A + A+YPF T+ PN+GIV+ Sbjct: 4 NCGIVGLPNVGKSTIFSALTAAPAEAANYPFCTIDPNVGIVEVPDPRLHRIAEIIHPRKV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G+++ A +G G+G++FL H + ++ H+V E+ Sbjct: 64 VPAAMEFV--DIAGLVRGASKGEGLGNQFLAHIRQVGIIAHVVRCFED 109 >gi|285017305|ref|YP_003375016.1| GTP-binding protein [Xanthomonas albilineans GPE PC73] gi|283472523|emb|CBA15028.1| putative gtp-binding protein [Xanthomonas albilineans] Length = 363 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 21/105 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A A++PF T+ PN+G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGVVPVPDPRLGALAAIIHPQKVVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 EF+ DI G++ A G G+G++FL H + H+V E Sbjct: 66 TAVEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFE 108 >gi|240102702|ref|YP_002959011.1| GTPase, NOG1/MMR-HSR1 family [Thermococcus gammatolerans EJ3] gi|239910256|gb|ACS33147.1| GTPase, NOG1/MMR-HSR1 family [Thermococcus gammatolerans EJ3] Length = 357 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 27/187 (14%) Query: 144 GILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE 203 +L + ++ L+L + I G PN GKST L ++T AKP++A YPFTT N+G +E Sbjct: 155 NVLKELPVVDLELPTVV---IAGHPNVGKSTLLRALTNAKPEVASYPFTTKGINVGQFEE 211 Query: 204 GYKEFILADIPGII------KNAHQGAGIGDRFLKHTERTHVLLHIVSALE------ENV 251 Y + + D PG++ +N + I LKH V+++I E E Sbjct: 212 HYLRYQVIDTPGLLDRPLSERNEVEKQAILA--LKHL--GDVIVYIFDPSEYCGFPIEEQ 267 Query: 252 QAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSIT 311 ++ IL+E + IV ++++D D D R E G P + S++T Sbjct: 268 MHLFEEILNEFGEFPF-------IVAINKVDIAD-DEKVRTVEEFVRAKGLEPVKISALT 319 Query: 312 GHGIPQI 318 G G+ ++ Sbjct: 320 GEGLDEL 326 >gi|170078335|ref|YP_001734973.1| GTP-binding protein [Synechococcus sp. PCC 7002] gi|169886004|gb|ACA99717.1| GTP-binding protein [Synechococcus sp. PCC 7002] Length = 364 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFI---------- 209 GI+GLPN GKST F A AK A++PF T+ PN+G+V +G + + Sbjct: 5 GIVGLPNVGKSTLFNALCENAKADAANFPFCTIEPNVGVVAVPDGRLDVLADISKSAKIV 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A QG G+G++FL + ++H+V +++ Sbjct: 65 PTRIEFVDIAGLVKGASQGEGLGNQFLANIREVDAIVHVVRCFDDD 110 >gi|316968819|gb|EFV53035.1| GTP-dependent nucleic acid-binding protein EngD [Trichinella spiralis] Length = 376 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T+ + +YPF T+ PN V K F Sbjct: 25 IGIVGLPNVGKSTFFNVLTKNQVPAENYPFCTIDPNESRVAVPDKRFDFLCDYYKPVSQV 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G++K A +G G+G+ FL H L + A EE Sbjct: 85 PAYLNVVDIAGLVKGASEGQGLGNAFLSHISACDALFMMCRAFEE 129 >gi|224533312|ref|ZP_03673906.1| GTP-binding protein Obg/CgtA [Borrelia burgdorferi CA-11.2a] gi|224513477|gb|EEF83834.1| GTP-binding protein Obg/CgtA [Borrelia burgdorferi CA-11.2a] Length = 150 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/121 (40%), Positives = 71/121 (58%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D + + SG+GG+G +SF REKF GGPDGG+GG GG V + NL+TL ++ Sbjct: 4 FKDSVNITVVSGNGGSGCVSFLREKFNAKGGPDGGNGGSGGSVIFKVRENLSTLSFYKNG 63 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 A++G+ GM RSGA G+D+ L VP T+V+ E+ +L+ L ++ GG Sbjct: 64 HVLCAENGKPGMGFKRSGANGKDLTLFVPPNTEVYNENDGTLLYRLKNLNDEFVVLKGGR 123 Query: 123 G 123 G Sbjct: 124 G 124 >gi|149193707|ref|ZP_01870805.1| translation-associated GTPase [Caminibacter mediatlanticus TB-2] gi|149135660|gb|EDM24138.1| translation-associated GTPase [Caminibacter mediatlanticus TB-2] Length = 364 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 27/157 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-----------------KE 203 +GI+GLPN GKST ++T+ + + A++PF T+ PN +V + Sbjct: 3 VGIVGLPNVGKSTTFNALTKTQNAEAANFPFCTIEPNKAVVPVPDERIEALAKIVKPERI 62 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 Y DI G++K A +G G+G++FL + T ++LH+V ++ + +D + Sbjct: 63 QYSTIEFVDIAGLVKGASKGEGLGNQFLANIRETDIILHMVRCFDDPNVIHVENSVDPI- 121 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC 300 + +EI+ ++ D TL ++ N L Q Sbjct: 122 -------RDVEIIE-QELLYADIQTLEKRINRLTKQA 150 >gi|15594580|ref|NP_212369.1| GTP-dependent nucleic acid-binding protein EngD [Borrelia burgdorferi B31] gi|224533827|ref|ZP_03674415.1| GTP-binding protein YchF [Borrelia burgdorferi CA-11.2a] gi|2688121|gb|AAC66614.1| conserved hypothetical protein [Borrelia burgdorferi B31] gi|224513120|gb|EEF83483.1| GTP-binding protein YchF [Borrelia burgdorferi CA-11.2a] Length = 368 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST +S+T + +IA+YPF T+ PN+GIV+ Sbjct: 6 GIVGLPNVGKSTLFSSLTSSNVEIANYPFCTIEPNIGIVEIPDERLLKISECIIPRKIIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A G G+G++FL + +++H+V EE Sbjct: 66 AVMEFV--DIAGLVKGASTGEGLGNKFLANIREVSLIVHVVRCFEE 109 >gi|227548169|ref|ZP_03978218.1| GTP-binding protein [Corynebacterium lipophiloflavum DSM 44291] gi|227079730|gb|EEI17693.1| GTP-binding protein [Corynebacterium lipophiloflavum DSM 44291] Length = 367 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 20/128 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY-KEFIL 210 +GI+GLPN GKST ++TR A+YPF T+ PN+G+V+ E + E IL Sbjct: 5 LGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGLVELPDERLTRLAEIFSSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 DI GI++ A +G G+G+ FL + + +V A ++ +D + Sbjct: 65 PATVSFVDIAGIVRGASEGEGMGNAFLANIREADAICQVVRAFSDDNVIHVDGRVDPAND 124 Query: 262 LSAYNSEL 269 +S N+EL Sbjct: 125 ISVINTEL 132 >gi|218708749|ref|YP_002416370.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio splendidus LGP32] gi|218321768|emb|CAV17723.1| GTP-dependent nucleic acid-binding protein [Vibrio splendidus LGP32] Length = 383 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN GIV Sbjct: 26 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGIVPVPDLRLDALAKIVNPQKILP 85 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ Sbjct: 86 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENI 132 >gi|18977867|ref|NP_579224.1| gtp1/obg family GTP-binding protein [Pyrococcus furiosus DSM 3638] gi|18893625|gb|AAL81619.1| GTP-binding protein, gtp1/obg family [Pyrococcus furiosus DSM 3638] Length = 357 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 89/180 (49%), Gaps = 24/180 (13%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII- 217 + + I G PN GKST L ++T AKP+IA YPFTT N+G ++GY ++ + D PG++ Sbjct: 167 VPTVVIAGHPNVGKSTLLKALTTAKPEIASYPFTTKGINVGQFEDGYFKYQVIDTPGLLD 226 Query: 218 -----KNAHQGAGIGDRFLKHTERTHVLLHIVSALE------ENVQAAYQCILDELSAYN 266 +N + I LKH ++++I E E ++ I +E + Sbjct: 227 RPLSERNEIEKQAILA--LKHL--GKLIIYIFDPSEYCGFPIEEQMHLFEEIYEEFKEFP 282 Query: 267 SELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 IV L++ID + + +K E + G P + S++ G G+ +I + + +K+ Sbjct: 283 F-------IVVLNKIDVAKEEQV-KKVEEFLERKGLKPIKISALKGEGVEEIRQIIIEKL 334 >gi|37528399|ref|NP_931744.1| putative GTPase HflX [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787837|emb|CAE16952.1| GTP-binding protein [Photorhabdus luminescens subsp. laumondii TTO1] Length = 426 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 19/176 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKS+ +T A+ AD F TL P L + +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSSLFNRMTAAEVYAADQLFATLDPTLRRIDVNDVGTVVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLHIV A ++EN+ AA +L+E+ A+ + Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHIVDAADSRIDENI-AAVDSVLEEIEAHEIPV--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQILECLHDKI 326 ++ +++ID +DS T +NE +P S+ TG GIP +L+ L +++ Sbjct: 313 --LLVMNKIDMLDSFTPRIDRNE-----DNLPVRVWLSAQTGEGIPLLLQALTERL 361 >gi|114319448|ref|YP_741131.1| GTP-binding protein YchF [Alkalilimnicola ehrlichii MLHE-1] gi|114225842|gb|ABI55641.1| GTP-binding protein YchF [Alkalilimnicola ehrlichii MLHE-1] Length = 363 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A+ +YPF T+ PN+G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTQAEIPAENYPFCTIDPNVGVVPVPDPRLDRLAEIVKPEKVIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL H T + ++ E++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNQFLAHIRETDAVAQVLRCFEDD 110 >gi|312884091|ref|ZP_07743804.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio caribbenthicus ATCC BAA-2122] gi|309368261|gb|EFP95800.1| GTP-dependent nucleic acid-binding protein EngD [Vibrio caribbenthicus ATCC BAA-2122] Length = 363 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN GIV Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGIVPVPDLRLDALANIVNPQKIIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ Sbjct: 66 TTMEFV--DIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENI 112 >gi|239948212|ref|ZP_04699965.1| GTP-binding protein YchF [Rickettsia endosymbiont of Ixodes scapularis] gi|241563390|ref|XP_002401684.1| GTP-binding protein, putative [Ixodes scapularis] gi|215501876|gb|EEC11370.1| GTP-binding protein, putative [Ixodes scapularis] gi|239922488|gb|EER22512.1| GTP-binding protein YchF [Rickettsia endosymbiont of Ixodes scapularis] Length = 365 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 22/108 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNL-------------------GIV 201 +GI+GLPN GKST ++T ++ A+YPF T+ PN G + Sbjct: 5 LGIVGLPNVGKSTLFNALTVSQAADAANYPFCTIEPNSSKVLVPDERLHKLASLAGSGKI 64 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y EF+ DI G++K A +G G+G++FL H +LH++ E+ Sbjct: 65 IPSYIEFV--DIAGLVKGASKGEGLGNKFLSHIREVDAILHVLRCFED 110 >gi|182436262|ref|YP_001823981.1| GTP-dependent nucleic acid-binding protein EngD [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776891|ref|ZP_08236156.1| GTP-binding protein YchF [Streptomyces cf. griseus XylebKG-1] gi|178464778|dbj|BAG19298.1| putative GTP binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326657224|gb|EGE42070.1| GTP-binding protein YchF [Streptomyces cf. griseus XylebKG-1] Length = 362 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYKEFIL- 210 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V E + L Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDPRLNKLAEIFNSQRLL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI++ A +G G+G++FL + + + ++ A +ENV Sbjct: 65 PATVDFVDIAGIVRGASEGEGLGNKFLANIRESDAICQVIRAFKDENV 112 >gi|216264929|ref|ZP_03436921.1| GTP-binding protein YchF [Borrelia burgdorferi 156a] gi|215981402|gb|EEC22209.1| GTP-binding protein YchF [Borrelia burgdorferi 156a] Length = 368 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST +S+T + +IA+YPF T+ PN+GIV+ Sbjct: 6 GIVGLPNVGKSTLFSSLTSSNVEIANYPFCTIEPNIGIVEIPDERLLKISECIVPRKIIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A G G+G++FL + +++H+V EE Sbjct: 66 AVMEFV--DIAGLVKGASTGEGLGNKFLANIREVSLIVHVVRCFEE 109 >gi|73542721|ref|YP_297241.1| translation-associated GTPase [Ralstonia eutropha JMP134] gi|72120134|gb|AAZ62397.1| Conserved hypothetical protein 92 [Ralstonia eutropha JMP134] Length = 387 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 32/151 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 30 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAKLAEIVKPERILP 89 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV--QAAYQCILD 260 EF+ DI G++ A +G G+G++FL + + H+V E ENV A L Sbjct: 90 ATVEFV--DIAGLVAGASKGEGLGNQFLANIRECDAITHVVRCFEDENVIHVAGRVDPLS 147 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 ++ N+EL L+ + TV+ LAR Sbjct: 148 DIEVINTEL-------ALADLGTVEK-ALAR 170 >gi|194290869|ref|YP_002006776.1| gtp-dependent nucleic acid-binding protein engd [Cupriavidus taiwanensis LMG 19424] gi|193224704|emb|CAQ70715.1| putative GTP-binding protein with nucleoside triP hydrolase domain, engD homolog [Cupriavidus taiwanensis LMG 19424] Length = 363 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAKLADIVKPERILP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + + H+V E++ Sbjct: 66 ATVEFV--DIAGLVAGASKGEGLGNQFLANIRECDAITHVVRCFEDD 110 >gi|195941411|ref|ZP_03086793.1| translation-associated GTPase [Borrelia burgdorferi 80a] gi|224532634|ref|ZP_03673255.1| GTP-binding protein YchF [Borrelia burgdorferi WI91-23] gi|225549036|ref|ZP_03770011.1| GTP-binding protein YchF [Borrelia burgdorferi 94a] gi|224512414|gb|EEF82794.1| GTP-binding protein YchF [Borrelia burgdorferi WI91-23] gi|225370262|gb|EEG99700.1| GTP-binding protein YchF [Borrelia burgdorferi 94a] gi|312147779|gb|ADQ30438.1| GTP-binding protein YchF [Borrelia burgdorferi JD1] gi|312149460|gb|ADQ29531.1| GTP-binding protein YchF [Borrelia burgdorferi N40] Length = 368 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST +S+T + +IA+YPF T+ PN+GIV+ Sbjct: 6 GIVGLPNVGKSTLFSSLTSSNVEIANYPFCTIEPNIGIVEIPDERLLKISECIVPRKIIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A G G+G++FL + +++H+V EE Sbjct: 66 AVMEFV--DIAGLVKGASTGEGLGNKFLANIREVSLIVHVVRCFEE 109 >gi|58583223|ref|YP_202239.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas oryzae pv. oryzae KACC10331] gi|84625059|ref|YP_452431.1| translation-associated GTPase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188575473|ref|YP_001912402.1| GTP-dependent nucleic acid-binding protein EngD [Xanthomonas oryzae pv. oryzae PXO99A] gi|58427817|gb|AAW76854.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84368999|dbj|BAE70157.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519925|gb|ACD57870.1| GTP-binding protein YchF [Xanthomonas oryzae pv. oryzae PXO99A] Length = 363 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A A++PF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLAGIVKPQKLIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A G G+G++FL H + H+V + + Sbjct: 66 TAVEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFDND 110 >gi|226320804|ref|ZP_03796358.1| GTP-binding protein YchF [Borrelia burgdorferi 29805] gi|226233779|gb|EEH32506.1| GTP-binding protein YchF [Borrelia burgdorferi 29805] Length = 368 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST +S+T + +IA+YPF T+ PN+GIV+ Sbjct: 6 GIVGLPNVGKSTLFSSLTSSNVEIANYPFCTIEPNIGIVEIPDERLLKISECIIPRKIIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A G G+G++FL + +++H+V EE Sbjct: 66 AVMEFV--DIAGLVKGASTGEGLGNKFLANIREVSLIVHVVRCFEE 109 >gi|297572040|ref|YP_003697814.1| GTP-binding protein YchF [Arcanobacterium haemolyticum DSM 20595] gi|296932387|gb|ADH93195.1| GTP-binding protein YchF [Arcanobacterium haemolyticum DSM 20595] Length = 365 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI GLPN GKST ++TRA A+YPF T+ PN+GIV G ++ + Sbjct: 5 IGIAGLPNVGKSTLFNALTRANVLAANYPFATIEPNVGIVPLPDPRLNKLAEIFGSQKIL 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI GI++ A +G G+G++FL + + + A + Sbjct: 65 PATVSFVDIAGIVRGASEGEGLGNQFLANIREADAICQVTRAFAD 109 >gi|159903753|ref|YP_001551097.1| GTP-binding protein [Prochlorococcus marinus str. MIT 9211] gi|159888929|gb|ABX09143.1| probable GTP-binding protein [Prochlorococcus marinus str. MIT 9211] Length = 393 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 19/113 (16%) Query: 158 LIADIGIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EG 204 L+ +GIIGLPN GKST F A V A+ + A++PF T+ PN+G V Sbjct: 30 LMLKVGIIGLPNVGKSTLFNALVANAQAQAANFPFCTIEPNIGTVAVPDERLNLLAALSS 89 Query: 205 YKEFILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 KE I A DI G+++ A QG G+G++FL + ++H+V E ENV Sbjct: 90 SKEIISARIEFVDIAGLVEGASQGEGLGNKFLANIREVDAIVHVVRCFEDENV 142 >gi|311898166|dbj|BAJ30574.1| putative GTP-dependent nucleic acid-binding protein EngD [Kitasatospora setae KM-6054] Length = 357 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------KEGYKEFI------ 209 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V E E Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDPRLEKLAEIFGSQRIL 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI++ A +G G+G++FL + + + +V A + Sbjct: 65 PATVDFVDIAGIVRGASEGEGLGNKFLANIREANAICQVVRAFTD 109 >gi|312138768|ref|YP_004006104.1| gtpase [Rhodococcus equi 103S] gi|325676538|ref|ZP_08156216.1| GTP-dependent nucleic acid-binding protein EngD [Rhodococcus equi ATCC 33707] gi|311888107|emb|CBH47419.1| putative GTPase [Rhodococcus equi 103S] gi|325552716|gb|EGD22400.1| GTP-dependent nucleic acid-binding protein EngD [Rhodococcus equi ATCC 33707] Length = 359 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY-KEFIL 210 +GI+GLPN GKST ++T+ A+YPF T+ PN+G+V+ E + E IL Sbjct: 5 LGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGLVELPDPRLNKLAEIFGSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +GAG+G++FL + + +V ++ Sbjct: 65 PATVSFVDIAGIVKGASEGAGLGNKFLANIREADAICQVVRVFADD 110 >gi|227494775|ref|ZP_03925091.1| GTP-binding protein [Actinomyces coleocanis DSM 15436] gi|226831775|gb|EEH64158.1| GTP-binding protein [Actinomyces coleocanis DSM 15436] Length = 359 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGY-KEFIL 210 IGI GLPN GKST ++TRA A+YPF T+ PN+G+V E + E IL Sbjct: 5 IGIAGLPNVGKSTLFNALTRATVLAANYPFATIEPNIGVVPLPDPRLNTLAEIFGSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI++ A +G G+G++FL + + + A + Sbjct: 65 PATVSFVDIAGIVRGASEGEGLGNKFLANIREADAICQVTRAFRD 109 >gi|189190246|ref|XP_001931462.1| GTP-binding protein 1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973068|gb|EDU40567.1| GTP-binding protein 1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 373 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 56/93 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ VT+ K + A Y FTTL G+++ G E + D+PGII+ Sbjct: 70 ARIALVGFPSVGKSTFLSRVTKTKSEAASYAFTTLTAIPGVLEYGGAEIQVLDLPGIIEG 129 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A +G G G + + + + ++ I+ A ++ Q Sbjct: 130 AAEGKGRGRQVISAAKTSDLVCMILDATKKAEQ 162 >gi|113869281|ref|YP_727770.1| GTP-dependent nucleic acid-binding protein EngD [Ralstonia eutropha H16] gi|113528057|emb|CAJ94402.1| Predicted GTP-binding protein [Ralstonia eutropha H16] Length = 363 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAKLAEIVKPERVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + + H+V E++ Sbjct: 66 ATVEFV--DIAGLVAGASKGEGLGNQFLANIRECDAITHVVRCFEDD 110 >gi|15077434|gb|AAK83161.1|AF333038_1 putative GTP binding protein [Streptomyces viridochromogenes] Length = 362 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 22/110 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------K 202 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDARLTKLAEIFSSQRIL 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 +F+ DI GI++ A +G G+G++FL + + + ++ A +ENV Sbjct: 65 PATVDFV--DIAGIVRGASEGEGLGNKFLANIRESDAICQVIRAFKDENV 112 >gi|291302967|ref|YP_003514245.1| GTP-binding protein YchF [Stackebrandtia nassauensis DSM 44728] gi|290572187|gb|ADD45152.1| GTP-binding protein YchF [Stackebrandtia nassauensis DSM 44728] Length = 358 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI+GLPN GKST ++TRA A+YPF T+ PN G+V K Sbjct: 6 IGIVGLPNVGKSTLFNALTRADILAANYPFATIEPNTGVVGVPDARLGKLAAMFDSQKVL 65 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G G++FL + + + +V ++ Sbjct: 66 PATVTFVDIAGLVKGASEGLGKGNKFLANIREANAICQVVRVFSDD 111 >gi|115770565|ref|XP_001186941.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115963896|ref|XP_001189713.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 353 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 23/142 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN----------LGIVKEGYKEFI-- 209 IGI+GLPN GKSTF +T+++ ++PF T+ PN + E +K Sbjct: 25 IGIVGLPNVGKSTFFNVLTKSQAAAENFPFCTIDPNENKVPVPDDRFDFLCEFHKPLSKV 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G++ AH+G G+G+ FL H + + H+ A E+ +V + D Sbjct: 85 PAFLNVTDIAGLVAGAHEGQGLGNAFLSHIKACDAIFHVCRAFEDEEVTHVDGDINPVRD 144 Query: 261 ELSAYNSELRKKIEIVGLSQID 282 + +N ELR K +I L+ +D Sbjct: 145 LDTIFN-ELRLK-DIEYLTDVD 164 >gi|120405577|ref|YP_955406.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium vanbaalenii PYR-1] gi|119958395|gb|ABM15400.1| GTP-binding protein YchF [Mycobacterium vanbaalenii PYR-1] Length = 360 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------KEGYKEF----- 208 ++GI+GLPN GKST ++TR A+YPF T+ PN G+V E + F Sbjct: 7 NLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNEGVVALPDPRLTELARIFGSEKI 66 Query: 209 -----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +GAG+G++FL + + +V ++ Sbjct: 67 LPAPVTFVDIAGIVKGASEGAGLGNKFLANIRECDAICQVVRVFADD 113 >gi|330993037|ref|ZP_08316975.1| GTP-dependent nucleic acid-binding protein engD [Gluconacetobacter sp. SXCC-1] gi|329759807|gb|EGG76313.1| GTP-dependent nucleic acid-binding protein engD [Gluconacetobacter sp. SXCC-1] Length = 364 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 18/108 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLG-----------IVKEGYKEF 208 + GI+GLPN GKST ++T A + A+YPF T+ PN+G + + G + Sbjct: 4 NCGIVGLPNVGKSTLFNALTETASAQAANYPFCTIEPNVGRVAVPDARLANLARIGKSQK 63 Query: 209 IL------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 IL DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 64 ILPTSLEFVDIAGLVRGASRGEGLGNQFLANIREVDAIIHVLRCFEDD 111 >gi|296114648|ref|ZP_06833301.1| GTP-dependent nucleic acid-binding protein EngD [Gluconacetobacter hansenii ATCC 23769] gi|295979004|gb|EFG85729.1| GTP-dependent nucleic acid-binding protein EngD [Gluconacetobacter hansenii ATCC 23769] Length = 364 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 18/108 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLG-----------IVKEGYKEF 208 + GI+GLPN GKST ++T A + A+YPF T+ PN+G + + G + Sbjct: 4 NCGIVGLPNVGKSTLFNALTETASAQAANYPFCTIEPNVGRVAVPDPRLAELARIGKSQK 63 Query: 209 IL------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 IL DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 64 ILPTSLEFVDIAGLVRGASRGEGLGNQFLANIREVDAIIHVLRCFEDD 111 >gi|82539543|ref|XP_724151.1| developmentally regulated GTP-binding protein 2 [Plasmodium yoelii yoelii str. 17XNL] gi|23478702|gb|EAA15716.1| developmentally regulated GTP-binding protein 2 [Plasmodium yoelii yoelii] Length = 367 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 52/93 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+ +T ++ADY FTTL GI+ + L D+PGII+ Sbjct: 62 ARVCLIGFPSVGKSTLLSKITNTTSEVADYEFTTLTCKPGIINHKDSKIQLLDLPGIIQG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A +G G G + + + +++ ++ +N Q Sbjct: 122 ASEGRGRGRQVIAVAKSCDMIMMVLDTTRDNSQ 154 >gi|15920663|ref|NP_376332.1| translation-associated GTPase [Sulfolobus tokodaii str. 7] gi|15621446|dbj|BAB65441.1| 400aa long hypothetical GTP-binding protein [Sulfolobus tokodaii str. 7] Length = 400 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI---------VKEGYK------ 206 IG+IG N GKSTF ++ T IA+ PF T+ PN+GI V+ G K Sbjct: 4 IGLIGKTNVGKSTFFSAATLIDVPIANRPFVTIEPNVGIAYVKKKCVHVEFGVKCNPKNS 63 Query: 207 ------EFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 FI L D+ G+I AH+G G+G++FL + VL+H++ A Sbjct: 64 ICIGDYRFIPVKLVDVAGLIPGAHEGRGLGNKFLDDLRKADVLIHVIDA 112 >gi|15608252|ref|NP_215628.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium tuberculosis H37Rv] gi|15840549|ref|NP_335586.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium tuberculosis CDC1551] gi|148660898|ref|YP_001282421.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium tuberculosis H37Ra] gi|148822325|ref|YP_001287079.1| translation-associated GTPase [Mycobacterium tuberculosis F11] gi|167969247|ref|ZP_02551524.1| translation-associated GTPase [Mycobacterium tuberculosis H37Ra] gi|215402943|ref|ZP_03415124.1| translation-associated GTPase [Mycobacterium tuberculosis 02_1987] gi|215410733|ref|ZP_03419541.1| translation-associated GTPase [Mycobacterium tuberculosis 94_M4241A] gi|215426407|ref|ZP_03424326.1| translation-associated GTPase [Mycobacterium tuberculosis T92] gi|215429987|ref|ZP_03427906.1| translation-associated GTPase [Mycobacterium tuberculosis EAS054] gi|215445279|ref|ZP_03432031.1| translation-associated GTPase [Mycobacterium tuberculosis T85] gi|218752800|ref|ZP_03531596.1| translation-associated GTPase [Mycobacterium tuberculosis GM 1503] gi|219556998|ref|ZP_03536074.1| translation-associated GTPase [Mycobacterium tuberculosis T17] gi|253799848|ref|YP_003032849.1| GTP binding protein [Mycobacterium tuberculosis KZN 1435] gi|254231390|ref|ZP_04924717.1| hypothetical protein TBCG_01097 [Mycobacterium tuberculosis C] gi|254364019|ref|ZP_04980065.1| hypothetical GTP binding protein [Mycobacterium tuberculosis str. Haarlem] gi|254550110|ref|ZP_05140557.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186041|ref|ZP_05763515.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium tuberculosis CPHL_A] gi|260200153|ref|ZP_05767644.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium tuberculosis T46] gi|289442542|ref|ZP_06432286.1| GTP-binding protein YchF [Mycobacterium tuberculosis T46] gi|289446702|ref|ZP_06436446.1| GTP binding protein [Mycobacterium tuberculosis CPHL_A] gi|289555101|ref|ZP_06444311.1| GTP binding protein [Mycobacterium tuberculosis KZN 605] gi|289569105|ref|ZP_06449332.1| GTP binding protein [Mycobacterium tuberculosis T17] gi|289744855|ref|ZP_06504233.1| translation-associated GTPase [Mycobacterium tuberculosis 02_1987] gi|289749648|ref|ZP_06509026.1| GTP binding protein [Mycobacterium tuberculosis T92] gi|289753178|ref|ZP_06512556.1| translation-associated GTPase [Mycobacterium tuberculosis EAS054] gi|289757201|ref|ZP_06516579.1| translation-associated GTPase [Mycobacterium tuberculosis T85] gi|289761252|ref|ZP_06520630.1| translation-associated GTPase [Mycobacterium tuberculosis GM 1503] gi|294993294|ref|ZP_06798985.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium tuberculosis 210] gi|297633652|ref|ZP_06951432.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium tuberculosis KZN 4207] gi|297730639|ref|ZP_06959757.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium tuberculosis KZN R506] gi|298524609|ref|ZP_07012018.1| translation-associated GTPase [Mycobacterium tuberculosis 94_M4241A] gi|306806980|ref|ZP_07443648.1| GTP binding protein [Mycobacterium tuberculosis SUMu007] gi|307083662|ref|ZP_07492775.1| GTP binding protein [Mycobacterium tuberculosis SUMu012] gi|313657969|ref|ZP_07814849.1| GTP-binding protein YchF [Mycobacterium tuberculosis KZN V2475] gi|3256023|emb|CAA17228.1| Probable GTP binding protein [Mycobacterium tuberculosis H37Rv] gi|13880727|gb|AAK45400.1| GTP-binding protein [Mycobacterium tuberculosis CDC1551] gi|124600449|gb|EAY59459.1| hypothetical protein TBCG_01097 [Mycobacterium tuberculosis C] gi|134149533|gb|EBA41578.1| hypothetical GTP binding protein [Mycobacterium tuberculosis str. Haarlem] gi|148505050|gb|ABQ72859.1| GTP-binding protein [Mycobacterium tuberculosis H37Ra] gi|148720852|gb|ABR05477.1| hypothetical GTP binding protein [Mycobacterium tuberculosis F11] gi|253321351|gb|ACT25954.1| GTP binding protein [Mycobacterium tuberculosis KZN 1435] gi|289415461|gb|EFD12701.1| GTP-binding protein YchF [Mycobacterium tuberculosis T46] gi|289419660|gb|EFD16861.1| GTP binding protein [Mycobacterium tuberculosis CPHL_A] gi|289439733|gb|EFD22226.1| GTP binding protein [Mycobacterium tuberculosis KZN 605] gi|289542859|gb|EFD46507.1| GTP binding protein [Mycobacterium tuberculosis T17] gi|289685383|gb|EFD52871.1| translation-associated GTPase [Mycobacterium tuberculosis 02_1987] gi|289690235|gb|EFD57664.1| GTP binding protein [Mycobacterium tuberculosis T92] gi|289693765|gb|EFD61194.1| translation-associated GTPase [Mycobacterium tuberculosis EAS054] gi|289708758|gb|EFD72774.1| translation-associated GTPase [Mycobacterium tuberculosis GM 1503] gi|289712765|gb|EFD76777.1| translation-associated GTPase [Mycobacterium tuberculosis T85] gi|298494403|gb|EFI29697.1| translation-associated GTPase [Mycobacterium tuberculosis 94_M4241A] gi|308346562|gb|EFP35413.1| GTP binding protein [Mycobacterium tuberculosis SUMu007] gi|308366656|gb|EFP55507.1| GTP binding protein [Mycobacterium tuberculosis SUMu012] gi|326904661|gb|EGE51594.1| GTP binding protein [Mycobacterium tuberculosis W-148] gi|328459593|gb|AEB05016.1| GTP binding protein [Mycobacterium tuberculosis KZN 4207] Length = 357 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 17/89 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 +GI+GLPN GKST ++TR A+YPF T+ PN G+V G + + Sbjct: 5 LGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGSQRVV 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKH 233 A DI G++K A +GAG+G++FL H Sbjct: 65 PAPVTFVDIAGLVKGASEGAGLGNKFLAH 93 >gi|254673163|emb|CBA08008.1| conserved hypothetical protein [Neisseria meningitidis alpha275] Length = 363 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+G+V + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGVVEVPDPRMAELAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V +++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDD 110 >gi|49473971|ref|YP_032013.1| translation-associated GTPase [Bartonella quintana str. Toulouse] gi|49239474|emb|CAF25826.1| GTP-binding protein [Bartonella quintana str. Toulouse] Length = 367 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTATAQAANYPFCTIEPNTGEVAVPDSRMEKIASIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ +++ Sbjct: 66 PTRISFIDIAGLVRGASKGEGLGNKFLANIREVDAIIHVLRCFQDD 111 >gi|323720393|gb|EGB29487.1| GTP-binding protein [Mycobacterium tuberculosis CDC1551A] Length = 355 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 17/89 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 +GI+GLPN GKST ++TR A+YPF T+ PN G+V G + + Sbjct: 3 LGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGSQRVV 62 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKH 233 A DI G++K A +GAG+G++FL H Sbjct: 63 PAPVTFVDIAGLVKGASEGAGLGNKFLAH 91 >gi|303283304|ref|XP_003060943.1| predicted protein [Micromonas pusilla CCMP1545] gi|226457294|gb|EEH54593.1| predicted protein [Micromonas pusilla CCMP1545] Length = 371 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V + + A+YPF T+ PN GIV G + Sbjct: 6 GIVGLPNVGKSTLFNALVENSTAEAANYPFCTIEPNSGIVPVPDDRLQALATISGTTNIV 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A GAG+G++FL + ++H+V +++ Sbjct: 66 PTTCEFVDIAGLVKGAADGAGLGNKFLANIRECDAVVHVVRCFDDD 111 >gi|296005534|ref|XP_002809086.1| GTP binding protein, putative [Plasmodium falciparum 3D7] gi|225632031|emb|CAX64367.1| GTP binding protein, putative [Plasmodium falciparum 3D7] Length = 367 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 53/93 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I +IG P+ GKST L+ +T ++ADY FTTL GI+ + L D+PGII+ Sbjct: 62 ARICLIGFPSVGKSTLLSKITSTTSEVADYEFTTLTCKPGIISYKDSKIQLLDLPGIIQG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A +G G G + + + +++ I+ A ++ Q Sbjct: 122 ASEGRGRGRQVIAVAKSCDMIMMILDATRDDSQ 154 >gi|302553899|ref|ZP_07306241.1| translation-associated GTPase [Streptomyces viridochromogenes DSM 40736] gi|302471517|gb|EFL34610.1| translation-associated GTPase [Streptomyces viridochromogenes DSM 40736] Length = 362 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 24/130 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VK 202 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+ V Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDPRLTKLAEIFSSQRVL 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCIL-- 259 +F+ DI GI++ A +G G+G++FL + + + ++ A +ENV + Sbjct: 65 PATVDFV--DIAGIVRGASEGEGLGNKFLANIRESDAICQVIRAFKDENVVHVDGKVSPK 122 Query: 260 DELSAYNSEL 269 D++ N+EL Sbjct: 123 DDIETINTEL 132 >gi|154507705|ref|ZP_02043347.1| hypothetical protein ACTODO_00186 [Actinomyces odontolyticus ATCC 17982] gi|153797339|gb|EDN79759.1| hypothetical protein ACTODO_00186 [Actinomyces odontolyticus ATCC 17982] Length = 360 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI GLPN GKST ++TRA A+YPF T+ PN+G+V G + + Sbjct: 5 IGIAGLPNVGKSTLFNALTRATVLAANYPFATIEPNVGVVPLPDPRLNKLADIFGSQRIL 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI GI++ A +G G+G++FL + + + A + Sbjct: 65 PATVSFVDIAGIVRGASEGEGLGNQFLANIREADAICQVTRAFSD 109 >gi|329118941|ref|ZP_08247636.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria bacilliformis ATCC BAA-1200] gi|327464969|gb|EGF11259.1| GTP-dependent nucleic acid-binding protein EngD [Neisseria bacilliformis ATCC BAA-1200] Length = 363 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T++ + A+YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAALAKIVNPQKMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++ A +G G+G++FL + T ++++V +EN+ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDENI 112 >gi|260576416|ref|ZP_05844406.1| GTP-binding protein YchF [Rhodobacter sp. SW2] gi|259021299|gb|EEW24605.1| GTP-binding protein YchF [Rhodobacter sp. SW2] Length = 365 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++TR A + A++PF T+ PN+G V G K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLEKLAAIAGSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G+++ A +G G+G++FL + + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVRGASKGEGLGNQFLANIRECDAIAHVLRCFED 110 >gi|260577667|ref|ZP_05845603.1| GTP-dependent nucleic acid-binding protein EngD [Corynebacterium jeikeium ATCC 43734] gi|258604213|gb|EEW17454.1| GTP-dependent nucleic acid-binding protein EngD [Corynebacterium jeikeium ATCC 43734] Length = 383 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK-EFIL 210 +GI+GLPN GKST ++TR A+YPF T+ PN+G+V+ E ++ E IL Sbjct: 27 LGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGLVELPDPRLTRLAEIFESERIL 86 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A G G+G+ FL + + +V A ++ Sbjct: 87 PATVSFVDIAGIVKGASDGEGMGNAFLANIREADAICQVVRAFSDD 132 >gi|68073569|ref|XP_678699.1| GTP-binding protein [Plasmodium berghei strain ANKA] gi|56499252|emb|CAI00015.1| GTP-binding protein, putative [Plasmodium berghei] Length = 362 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 52/93 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+ +T ++ADY FTTL GI+ + L D+PGII+ Sbjct: 57 ARVCLIGFPSVGKSTLLSKITNTTSEVADYEFTTLTCKPGIINHKDSKIQLLDLPGIIQG 116 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A +G G G + + + +++ ++ +N Q Sbjct: 117 ASEGRGRGRQVIAVAKSCDMIMMVLDTTRDNSQ 149 >gi|213419001|ref|ZP_03352067.1| translation-associated GTPase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 104 Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 17/99 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI G++K A +G G+G++FL + T + H+V Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVV 104 >gi|166710812|ref|ZP_02242019.1| translation-associated GTPase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 363 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A A++PF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAANFPFCTIEPNVGIVPVPDPRLNQLADIVKPQKLIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A G G+G++FL H + H+V + + Sbjct: 66 TAVEFV--DIAGLVAGAASGEGLGNKFLAHIREVDAITHVVRCFDND 110 >gi|322706859|gb|EFY98438.1| GTP-binding protein [Metarhizium anisopliae ARSEF 23] Length = 417 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 26/111 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P+AGKST L S+T A K+ ++PFTT+ PN Sbjct: 7 IGLVGKPSAGKSTTLNSLTDASSKVGNFPFTTIDPQRAIGYLQIDCACARHHVSDRCKPN 66 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G +G + L D+ G++ AHQG G+G++FL L+H+V A Sbjct: 67 YGACVDGRRSVPIELLDVAGLVPGAHQGRGLGNKFLDDLRHADALIHVVDA 117 >gi|319406823|emb|CBI80456.1| GTP-binding protein [Bartonella sp. 1-1C] Length = 367 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 19/108 (17%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDLRMKKVASIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 DI G+++ A +G G+G++FL + ++H++ + EN+ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAIIHVLRCFQDENI 113 >gi|319403816|emb|CBI77400.1| GTP-binding protein [Bartonella rochalimae ATCC BAA-1498] Length = 367 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 19/108 (17%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDLRMKKVASIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 DI G+++ A +G G+G++FL + ++H++ + EN+ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAIIHVLRCFQDENI 113 >gi|255642443|gb|ACU21485.1| unknown [Glycine max] Length = 394 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------------KEGY 205 IGI+GLPN GKST ++T+ ++PF T+ PN V K Sbjct: 27 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNVPDERFEWLCQLFKPKSEV 86 Query: 206 KEFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F+ + DI G+++ AHQG G+G+ FL H + H++ A E+ Sbjct: 87 SAFLEIHDIAGLVRGAHQGQGLGNSFLSHIRAVDGIFHVLRAFED 131 >gi|118591927|ref|ZP_01549322.1| translation-associated GTPase [Stappia aggregata IAM 12614] gi|118435570|gb|EAV42216.1| translation-associated GTPase [Stappia aggregata IAM 12614] Length = 366 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRLYEIRKVAGSKEVI 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + + H++ E++ Sbjct: 66 PTRITFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVLRCFEDD 111 >gi|86610344|ref|YP_479106.1| GTP-dependent nucleic acid-binding protein EngD [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558886|gb|ABD03843.1| GTP-binding protein YchF [Synechococcus sp. JA-2-3B'a(2-13)] Length = 363 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 19/108 (17%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A AK + A++PF T+ PN+G V G E I Sbjct: 5 GIVGLPNVGKSTLFNALCENAKAEAANFPFCTIEPNVGRVAVPDERLQVLAKISGSAEII 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 DI G++ A +G G+G++FL H + ++H+V + EN+ Sbjct: 65 PSQIEFVDIAGLVAGASKGEGLGNQFLSHIRQVDAVVHVVRCFQDENI 112 >gi|303233026|ref|ZP_07319705.1| GTP-binding protein YchF [Atopobium vaginae PB189-T1-4] gi|302480897|gb|EFL43978.1| GTP-binding protein YchF [Atopobium vaginae PB189-T1-4] Length = 353 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 21/102 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++T+ A+YPF T+ PN+GIV+ Sbjct: 5 IGIVGLPNVGKSTLFTALTKQGGLAANYPFATIDPNVGIVRVPDERLQKLADIVHPARVV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 EF+ DI G++K A++G G+G++FL + + + +V Sbjct: 65 PATVEFV--DIAGLVKGANKGEGLGNQFLANIRQCDAICEVV 104 >gi|291000334|ref|XP_002682734.1| predicted protein [Naegleria gruberi] gi|284096362|gb|EFC49990.1| predicted protein [Naegleria gruberi] Length = 386 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP---NLGIVKEGYKEFI-------- 209 +IGI+GLPN GKSTF +T ++ ++PF T+ P + + E + + Sbjct: 17 EIGIVGLPNVGKSTFFNVLTNSQVPAENFPFCTIDPATSRVAVPDERFDWLVGHWQPANH 76 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++KNA +G G+G+ FL H T + H+V + Sbjct: 77 VPAILNVTDIAGLVKNASEGEGLGNAFLSHIRATDAIFHMVRTFD 121 >gi|146306086|ref|YP_001186551.1| translation-associated GTPase [Pseudomonas mendocina ymp] gi|145574287|gb|ABP83819.1| GTP-binding protein YchF [Pseudomonas mendocina ymp] Length = 366 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 30/156 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T++ ++PF T+ PN GIV + E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAEIVKPEKV 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E ENV + Sbjct: 64 IPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV----------I 113 Query: 263 SAYNS-ELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 NS + ++ IEI+ L I D D+ ++ +A Sbjct: 114 HVANSVDPKRDIEIIDLELI-MADLDSCEKQLQRVA 148 >gi|254819700|ref|ZP_05224701.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium intracellulare ATCC 13950] Length = 357 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +GI+GLPN GKST ++TR A+YPF T+ PN G+V K Sbjct: 5 LGIVGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVPLPDPRLDKLAEMFDSEKIV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +GAG+G++FL + + +V ++ Sbjct: 65 PAPVTFVDIAGIVKGASEGAGLGNKFLANIRECDAICQVVRVFADD 110 >gi|269955746|ref|YP_003325535.1| GTP-binding protein YchF [Xylanimonas cellulosilytica DSM 15894] gi|269304427|gb|ACZ29977.1| GTP-binding protein YchF [Xylanimonas cellulosilytica DSM 15894] Length = 361 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 17/99 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI+GLPN GKST ++TR + A+YPF T+ PN+G+V G + + Sbjct: 5 IGIVGLPNVGKSTLFNALTRNQVLAANYPFATIEPNVGVVPLPDPRLNTLAGIFGSERIL 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHI 243 A DI GI+K A +G G+G++FL + + + Sbjct: 65 PATVSFVDIAGIVKGASEGEGLGNKFLANIREADAICQV 103 >gi|145298186|ref|YP_001141027.1| GTPase [Aeromonas salmonicida subsp. salmonicida A449] gi|142850958|gb|ABO89279.1| predicted GTPase [Aeromonas salmonicida subsp. salmonicida A449] Length = 363 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 24/129 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAAIINPQRVVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQCI-LD 260 EF+ DI G++ A +G G+G++FL + T + H+V +++ V A + D Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNQFLANIRETEAIGHVVRCFDDDNIVHVAGKVSPAD 123 Query: 261 ELSAYNSEL 269 ++ N+EL Sbjct: 124 DIEVINTEL 132 >gi|301091574|ref|XP_002895969.1| GTP-dependent nucleic acid-binding protein engD [Phytophthora infestans T30-4] gi|262096016|gb|EEY54068.1| GTP-dependent nucleic acid-binding protein engD [Phytophthora infestans T30-4] Length = 384 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKST ++T+ + + A+YPF T+ PN+ V Sbjct: 22 VGIVGLPNVGKSTLFNALTKTEVAQAANYPFCTIDPNVARVAVPDERVRHLAEVEKSKRV 81 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 E EF+ DI G+++ A G G+G++FL + + V+ H+V E+ Sbjct: 82 IETQLEFV--DIAGLVRGASNGEGLGNKFLDNIRQVAVIAHVVRCFEDT 128 >gi|219850971|ref|YP_002465403.1| translation-associated GTPase [Methanosphaerula palustris E1-9c] gi|219545230|gb|ACL15680.1| GTP-binding protein HSR1-related [Methanosphaerula palustris E1-9c] Length = 389 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 22/106 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN------------------LGIVKE 203 I + G PN GKSTF + T A +IA+YPFTT+ N G+ + Sbjct: 4 IALAGKPNCGKSTFFKAATLADAEIANYPFTTIDANHGVAYVRVPCQCKEMKVSCGVCHD 63 Query: 204 GYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G++ FI L D+ G++ AH G G+G++FL + + + ++H+V A Sbjct: 64 GFR-FIPVNLIDVAGLVPEAHTGRGLGNQFLDNLRQANAIIHVVDA 108 >gi|111225483|ref|YP_716277.1| GTP-dependent nucleic acid-binding protein EngD [Frankia alni ACN14a] gi|111153015|emb|CAJ64762.1| putative GTP-binding protein with nucleoside triP hydrolase domain [Frankia alni ACN14a] Length = 358 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 17/100 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------KEGYKEFILA--- 211 IGI+GLPN GKST ++TR A+YPF T+ PN+G+V E K + A Sbjct: 5 IGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGVVGVPDPRLDELAKLYDSARVV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI G+++ A +G G+G+RFL + + + +V Sbjct: 65 PATVSFVDIAGLVRGASEGQGLGNRFLANIRESDAVCQVV 104 >gi|85708580|ref|ZP_01039646.1| GTPase [Erythrobacter sp. NAP1] gi|85690114|gb|EAQ30117.1| GTPase [Erythrobacter sp. NAP1] Length = 366 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------KEG 204 GI+GLPN GKST ++T + + A+YPF T+ PN+G V K Sbjct: 6 GIVGLPNVGKSTLFNALTETQAAQAANYPFCTIEPNVGQVAVPDERLDKIAAIAKSAKVI 65 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A QG G+G++FL + ++H++ E++ Sbjct: 66 ATQLAFVDIAGLVKGASQGEGLGNQFLGNIREVDAIVHVLRCFEDD 111 >gi|319789813|ref|YP_004151446.1| GTP-binding protein YchF [Thermovibrio ammonificans HB-1] gi|317114315|gb|ADU96805.1| GTP-binding protein YchF [Thermovibrio ammonificans HB-1] Length = 367 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 22/110 (20%) Query: 161 DIGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK----EGYK--------- 206 + GI+GLPN GKST ++T AK + A+YPF T+ PN+GIV+ YK Sbjct: 4 NCGIVGLPNVGKSTLFNALTSSAKAESANYPFCTIEPNVGIVEVPDERLYKIAEVVKPKK 63 Query: 207 ------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A +G G+G++FL + + H+V ++ Sbjct: 64 VTPTTIEFV--DIAGLVKGASKGEGLGNQFLANIRGVDAIAHVVRCFADD 111 >gi|296204491|ref|XP_002749373.1| PREDICTED: obg-like ATPase 1-like [Callithrix jacchus] Length = 472 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 101 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 160 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 161 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 206 >gi|161511060|ref|NP_797116.2| GTP-dependent nucleic acid-binding protein EngD [Vibrio parahaemolyticus RIMD 2210633] gi|328473491|gb|EGF44339.1| GTP-binding protein YchF [Vibrio parahaemolyticus 10329] Length = 363 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNPQKVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ Sbjct: 66 TTMEFV--DIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENI 112 >gi|330811727|ref|YP_004356189.1| GTP-dependent nucleic acid-binding protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379835|gb|AEA71185.1| Putative GTP-dependent nucleic acid-binding protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 366 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 30/156 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFIL---- 210 + GI+GLPN GKST ++T++ ++PF T+ PN GIV E ++ Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNTGIVPMPDPRLEALAAIVIPERV 63 Query: 211 -------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E ENV + Sbjct: 64 LPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV----------I 113 Query: 263 SAYNS-ELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 NS + ++ IEI+ L I D D+ ++ ++A Sbjct: 114 HVSNSVDPKRDIEIIDLELI-FADLDSCEKQLQKVA 148 >gi|293189378|ref|ZP_06608101.1| GTP-binding protein YchF [Actinomyces odontolyticus F0309] gi|292821841|gb|EFF80777.1| GTP-binding protein YchF [Actinomyces odontolyticus F0309] Length = 360 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI GLPN GKST ++TRA A+YPF T+ PN+G+V G + + Sbjct: 5 IGIAGLPNVGKSTLFNALTRATVLAANYPFATIEPNVGVVPLPDPRLNKLAEIFGSQRIL 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI GI++ A +G G+G++FL + + + A + Sbjct: 65 PATVSFVDIAGIVRGASEGEGLGNQFLANIREADAICQVTRAFSD 109 >gi|260779391|ref|ZP_05888283.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio coralliilyticus ATCC BAA-450] gi|260605555|gb|EEX31850.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio coralliilyticus ATCC BAA-450] Length = 363 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNPQKVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENI 112 >gi|14521723|ref|NP_127199.1| translation-associated GTPase [Pyrococcus abyssi GE5] gi|5458942|emb|CAB50429.1| GTP-binding protein [Pyrococcus abyssi GE5] Length = 397 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 24/108 (22%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV--------KE--------- 203 +IG++G PN GKSTF ++ T +IA+YPFTT+ N+G+ KE Sbjct: 2 EIGVVGKPNVGKSTFFSAATLVDVEIANYPFTTIDANVGVTYAIAEHPCKELGCKPNPQN 61 Query: 204 -GYKEFI------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 Y+E + + D+ G++ AH+G G+G++FL L+H+V Sbjct: 62 YEYREGLALIPVKMIDVAGLVPGAHEGRGLGNKFLDDLRMASALIHVV 109 >gi|76677911|ref|NP_001029099.1| obg-like ATPase 1 [Rattus norvegicus] gi|215275692|sp|A0JPJ7|OLA1_RAT RecName: Full=Obg-like ATPase 1 gi|117558623|gb|AAI27458.1| Obg-like ATPase 1 [Rattus norvegicus] Length = 396 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQCHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|330502025|ref|YP_004378894.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas mendocina NK-01] gi|328916311|gb|AEB57142.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas mendocina NK-01] Length = 366 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 30/156 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T++ ++PF T+ PN GIV + E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAEIVKPEKV 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E ENV + Sbjct: 64 IPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV----------I 113 Query: 263 SAYNS-ELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 NS + ++ IEI+ L I D D+ ++ +A Sbjct: 114 HVANSVDPKRDIEIIDLELI-MADLDSCEKQLQRVA 148 >gi|84685124|ref|ZP_01013023.1| GTP-binding protein YchF [Maritimibacter alkaliphilus HTCC2654] gi|84666856|gb|EAQ13327.1| GTP-binding protein YchF [Rhodobacterales bacterium HTCC2654] Length = 365 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++TR A + A++PF T+ PN+G V KE Sbjct: 5 MGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLDKLAEIAKSKEI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIREVDAIAHVLRCFED 110 >gi|323492383|ref|ZP_08097536.1| GTP-binding protein YchF [Vibrio brasiliensis LMG 20546] gi|323313430|gb|EGA66541.1| GTP-binding protein YchF [Vibrio brasiliensis LMG 20546] Length = 363 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNPQKVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ Sbjct: 66 TTMEFV--DIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENI 112 >gi|323496823|ref|ZP_08101860.1| GTP-binding protein YchF [Vibrio sinaloensis DSM 21326] gi|323318082|gb|EGA71056.1| GTP-binding protein YchF [Vibrio sinaloensis DSM 21326] Length = 363 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNPQKILP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ Sbjct: 66 TTMEFV--DIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENI 112 >gi|309812464|ref|ZP_07706219.1| GTP-binding protein YchF [Dermacoccus sp. Ellin185] gi|308433769|gb|EFP57646.1| GTP-binding protein YchF [Dermacoccus sp. Ellin185] Length = 357 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 17/103 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------KEGYKEF------ 208 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V K+ + F Sbjct: 5 IGIVGLPNVGKSTMFNALTKNNVLAANYPFATIEPNVGVVPLPDPRLKKLAEIFGSAAIL 64 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 DI GI+K A +G G+G++FL + + +V A Sbjct: 65 PATVSFVDIAGIVKGASEGEGLGNKFLANIREADAICQVVRAF 107 >gi|307544464|ref|YP_003896943.1| translation-associated GTPase [Halomonas elongata DSM 2581] gi|307216488|emb|CBV41758.1| translation-associated GTPase [Halomonas elongata DSM 2581] Length = 363 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 30/156 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T++ ++PF T+ PN+GIV + E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIDAENFPFCTIEPNVGIVPMPDPRLDKLAEIVKPQKV 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQCILDE 261 DI G++ A +G G+G++FL + T + H+V + + + + Q Sbjct: 64 IPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETQAIAHVVRCFDNDNVIHVSNQV---- 119 Query: 262 LSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 + R IE + L ++ D DT+ R LA Sbjct: 120 ------DPRADIETINL-ELALADLDTVERAIQRLA 148 >gi|289640692|ref|ZP_06472864.1| GTP-binding protein YchF [Frankia symbiont of Datisca glomerata] gi|289509581|gb|EFD30508.1| GTP-binding protein YchF [Frankia symbiont of Datisca glomerata] Length = 358 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI+GLPN GKST ++TR A+YPF T+ PN+G+V + Sbjct: 5 IGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGVVGVPDPRLDRLAEVFHSARTV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+++ A +G G+G+RFL + + + +V + Sbjct: 65 PATVSFVDIAGLVRGASEGQGLGNRFLANIRESDAVCQVVRVFSD 109 >gi|161486644|ref|NP_933717.2| translation-associated GTPase [Vibrio vulnificus YJ016] gi|320157145|ref|YP_004189524.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio vulnificus MO6-24/O] gi|224184703|gb|ACN39578.1| YchF [Vibrio vulnificus] gi|319932457|gb|ADV87321.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio vulnificus MO6-24/O] Length = 363 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDELAKIVNPQRILP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ Sbjct: 66 TTMEFV--DIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENI 112 >gi|302558645|ref|ZP_07310987.1| GTP-binding protein YchF [Streptomyces griseoflavus Tu4000] gi|302476263|gb|EFL39356.1| GTP-binding protein YchF [Streptomyces griseoflavus Tu4000] Length = 362 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 24/130 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VK 202 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+ V Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDPRLTKLAEIFTSQRVL 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCIL-- 259 +F+ DI GI++ A +G G+G++FL + + + ++ A +ENV + Sbjct: 65 PATVDFV--DIAGIVRGASEGEGLGNKFLANIRESDAICQVIRAFKDENVVHVDGKVSPK 122 Query: 260 DELSAYNSEL 269 D++ N+EL Sbjct: 123 DDIETINTEL 132 >gi|227504065|ref|ZP_03934114.1| GTP-binding protein [Corynebacterium striatum ATCC 6940] gi|227199331|gb|EEI79379.1| GTP-binding protein [Corynebacterium striatum ATCC 6940] Length = 361 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY-KEFIL 210 +GI+GLPN GKST ++TR+ A+YPF T+ PN+G+V+ E + E IL Sbjct: 5 LGIVGLPNVGKSTLFNALTRSDILAANYPFATIEPNVGLVELPDHRLNRLAEIFSSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI++ A +G G+G+ FL + + +V A ++ Sbjct: 65 PATVSFVDIAGIVEGASKGEGMGNAFLANIREADAICQVVRAFSDD 110 >gi|261253604|ref|ZP_05946177.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio orientalis CIP 102891] gi|260936995|gb|EEX92984.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio orientalis CIP 102891] Length = 363 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNPQKVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ Sbjct: 66 TTMEFV--DIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENI 112 >gi|260819778|ref|XP_002605213.1| hypothetical protein BRAFLDRAFT_114616 [Branchiostoma floridae] gi|229290544|gb|EEN61223.1| hypothetical protein BRAFLDRAFT_114616 [Branchiostoma floridae] Length = 394 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 72/145 (49%), Gaps = 18/145 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL----YPN------LGIVKEGYKE---F 208 +GI+GLPN GKSTF +T+++ ++PF T+ P+ K K Sbjct: 25 VGIVGLPNVGKSTFFNVLTKSQASAENFPFCTIGRVPVPDDRWHWLCDFHKPASKVPAFL 84 Query: 209 ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILDELSA 264 ++ DI G+++ AH+G G+G+ FL H + T + H+ A E++ V+ + D + Sbjct: 85 LVTDIAGLVRGAHEGQGLGNAFLSHIKATDAIFHMTRAFEDDDVTHVEGDVNPVRD-MEI 143 Query: 265 YNSELRKKIEIVGLSQIDTVDSDTL 289 + ELR K SQ+ ++ + Sbjct: 144 IHDELRMKDIEYAQSQVSKMEKTCI 168 >gi|114767694|ref|ZP_01446390.1| GTP-binding protein YchF [Pelagibaca bermudensis HTCC2601] gi|114540302|gb|EAU43400.1| GTP-binding protein YchF [Roseovarius sp. HTCC2601] Length = 169 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 18/107 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLG--------------IVKEGY- 205 +GI+GLPN GKST ++TR A + A++PF T+ PN+G I K Sbjct: 5 MGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGDVAVPDARLDKLAAIAKSQNI 64 Query: 206 --KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H++ E++ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFEDD 111 >gi|85373990|ref|YP_458052.1| GTP-dependent nucleic acid-binding protein EngD [Erythrobacter litoralis HTCC2594] gi|84787073|gb|ABC63255.1| GTPase [Erythrobacter litoralis HTCC2594] Length = 366 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------KEG 204 GI+GLPN GKST ++T + + A+YPF T+ PN+G V K Sbjct: 6 GIVGLPNVGKSTLFNALTETQAAQAANYPFCTIEPNVGQVAVPDERLDKIAAIAKSAKVI 65 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A QG G+G++FL + ++H++ E++ Sbjct: 66 ATQLAFVDIAGLVKGASQGEGLGNQFLGNIREVDAIVHVLRCFEDD 111 >gi|321311047|ref|YP_004193376.1| GTP-binding and nucleic acid-binding protein YchF [Mycoplasma haemofelis str. Langford 1] gi|319802891|emb|CBY93537.1| GTP-binding and nucleic acid-binding protein YchF [Mycoplasma haemofelis str. Langford 1] Length = 354 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-----------------EG 204 +GI+GLPN GKS+ ++T + + PF T+ PNLGIVK Sbjct: 5 MGIVGLPNVGKSSLFNALTNGNALVENRPFATIEPNLGIVKLLDPRIVKLSEIVNPERTV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y DI G++K A G G+G++FL++ + +V A E+ Sbjct: 65 YSTVKFLDIAGLVKGASHGEGLGNKFLENIRSVDAICLVVRAFED 109 >gi|319898489|ref|YP_004158582.1| GTP-binding protein [Bartonella clarridgeiae 73] gi|319402453|emb|CBI75994.1| GTP-binding protein [Bartonella clarridgeiae 73] Length = 367 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 19/108 (17%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDLRMKKIASIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 DI G+++ A +G G+G++FL + ++H++ + EN+ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAIIHVLRCFQDENI 113 >gi|260767759|ref|ZP_05876694.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio furnissii CIP 102972] gi|260617268|gb|EEX42452.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio furnissii CIP 102972] gi|315179409|gb|ADT86323.1| GTP-binding protein [Vibrio furnissii NCTC 11218] Length = 363 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALANIVNPERVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENI 112 >gi|237874213|ref|NP_001153863.1| Obg-like ATPase 1 [Acyrthosiphon pisum] gi|239788262|dbj|BAH70819.1| ACYPI52009 [Acyrthosiphon pisum] gi|239788264|dbj|BAH70820.1| ACYPI52009 [Acyrthosiphon pisum] gi|239788266|dbj|BAH70821.1| ACYPI52009 [Acyrthosiphon pisum] gi|239788268|dbj|BAH70822.1| ACYPI52009 [Acyrthosiphon pisum] gi|239788270|dbj|BAH70823.1| ACYPI52009 [Acyrthosiphon pisum] gi|239788272|dbj|BAH70824.1| ACYPI52009 [Acyrthosiphon pisum] Length = 397 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 22/134 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 +GI+G+PN GKSTF +T+++ ++PF T+ PN V + F Sbjct: 24 VGIVGIPNVGKSTFFNVLTKSEAAAENFPFCTIDPNESRVPVPDQRFDYLVEYFKPTSKV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G++K A +G G+G+ FL H + L H+ A E +++ I D Sbjct: 84 PAFLNVVDIAGLVKGAAEGQGLGNAFLSHIKACDALFHLCRAFEAEDVIHIEGEVNPIKD 143 Query: 261 ELSAYNSELRKKIE 274 + N ELR K E Sbjct: 144 -MEVINEELRLKDE 156 >gi|195447010|ref|XP_002071025.1| GK25358 [Drosophila willistoni] gi|194167110|gb|EDW82011.1| GK25358 [Drosophila willistoni] Length = 397 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 22/145 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IGI+G+PN GKSTF +T + ++PF T+ PN + + E + + Sbjct: 24 IGIVGVPNVGKSTFFNVLTESAAPAENFPFCTIKPNESRVPVPDERFNYLVEYHKPASVV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G++K A +G G+G+ FL H + H+ A E+ +V+ + D Sbjct: 84 PAYLNVVDIAGLVKGAAEGQGLGNDFLSHISACDAIFHLCRAFEDPDVTHVEGEVDPVRD 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVD 285 L + ELR K E L +D ++ Sbjct: 144 -LEIISEELRLKDEEKLLQNLDKLE 167 >gi|195393860|ref|XP_002055571.1| GJ18714 [Drosophila virilis] gi|194150081|gb|EDW65772.1| GJ18714 [Drosophila virilis] Length = 397 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 22/145 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFI---------- 209 IGI+G+PN GKSTF +T++ ++PF T+ PN IV + +++ Sbjct: 24 IGIVGVPNVGKSTFFNVLTQSAAPAENFPFCTIKPNESRVIVPDERFDYLVEFHKPASVV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G++K A +G G+G+ FL H + H+ A E+ +V+ + D Sbjct: 84 PAYLNVVDIAGLVKGAAEGQGLGNDFLSHISACDAIFHLCRAFEDPDVTHVEGEVDPVRD 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVD 285 L + ELR K E L +D ++ Sbjct: 144 -LEIISEELRLKDEEKLLQSLDKLE 167 >gi|156973543|ref|YP_001444450.1| translation-associated GTPase [Vibrio harveyi ATCC BAA-1116] gi|156525137|gb|ABU70223.1| hypothetical protein VIBHAR_01244 [Vibrio harveyi ATCC BAA-1116] Length = 363 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNPQKVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFV--DIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFEND 110 >gi|16330542|ref|NP_441270.1| GTP-dependent nucleic acid-binding protein EngD [Synechocystis sp. PCC 6803] gi|1653033|dbj|BAA17950.1| sll0245 [Synechocystis sp. PCC 6803] Length = 363 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST F A V AK + A++PF T+ PN+G+V Sbjct: 5 GIVGLPNVGKSTLFNALVANAKAEAANFPFCTIEPNVGVVSVPDDRLGKLAEISQSVKVV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + ++H+V +++ Sbjct: 65 PTRMEFV--DIAGLVAGASKGEGLGNQFLANIREVDAIVHVVRCFDDD 110 >gi|71082805|ref|YP_265524.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus Pelagibacter ubique HTCC1062] gi|91762772|ref|ZP_01264737.1| Predicted GTPase [Candidatus Pelagibacter ubique HTCC1002] gi|71061918|gb|AAZ20921.1| Predicted GTPase [Candidatus Pelagibacter ubique HTCC1062] gi|91718574|gb|EAS85224.1| Predicted GTPase [Candidatus Pelagibacter ubique HTCC1002] Length = 357 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIV-----------------KEG 204 GI+GLPN GKST ++T + K + A++PF T+ PN+G+V K+ Sbjct: 6 GIVGLPNVGKSTLFNALTNSSKAQAANFPFCTIEPNVGVVPVPDERLDKLVEISKSKKKI 65 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL H ++H++ + + Sbjct: 66 NTTIEFVDIAGLVAGASKGEGLGNKFLSHIREVDAVIHMIRCFDSD 111 >gi|62901952|gb|AAY18927.1| DKFZp761C10121 [synthetic construct] Length = 420 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 49 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 108 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 109 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 154 >gi|329935241|ref|ZP_08285207.1| GTP-dependent nucleic acid-binding protein EngD [Streptomyces griseoaurantiacus M045] gi|329305064|gb|EGG48923.1| GTP-dependent nucleic acid-binding protein EngD [Streptomyces griseoaurantiacus M045] Length = 429 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 20/128 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V Sbjct: 72 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDPRLTKLAEIFSSQRVL 131 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCIL--DE 261 DI GI++ A +G G+G++FL + + + ++ A +ENV + D+ Sbjct: 132 PATVDFVDIAGIVRGASEGEGLGNKFLANIRESDAICQVIRAFKDENVVHVDGKVSPKDD 191 Query: 262 LSAYNSEL 269 + N+EL Sbjct: 192 IETINTEL 199 >gi|291320338|ref|YP_003515600.1| GTP binding protein [Mycoplasma agalactiae] gi|290752671|emb|CBH40644.1| GTP binding protein [Mycoplasma agalactiae] Length = 367 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST +++T+ + + ++Y FTT+ PN+ V K Sbjct: 6 GIVGLPNVGKSTLFSALTKHQVEASNYAFTTIDPNISSVALKDQRLVELAKIVNPAKIVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 F DI G++K A +G G+G++FL + ++H+V E Sbjct: 66 ATFDFVDIAGLVKGASKGEGLGNKFLSNIREVDAIIHVVRCFE 108 >gi|296140787|ref|YP_003648030.1| GTP-binding protein YchF [Tsukamurella paurometabola DSM 20162] gi|296028921|gb|ADG79691.1| GTP-binding protein YchF [Tsukamurella paurometabola DSM 20162] Length = 357 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 17/100 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY-KEFIL 210 +GI+GLPN GKST ++T ++ + A+YPF T+ PN+G+V E + E IL Sbjct: 5 LGIVGLPNVGKSTLFNALTNSEVEAANYPFATIEPNVGVVNLPDPRLDRLAEIFSSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI GI+K A +G G+G++FL + + +V Sbjct: 65 PATVSFVDIAGIVKGASEGEGMGNQFLSNIREADAICQVV 104 >gi|189184107|ref|YP_001937892.1| GTP-binding protein, Era/Obg family [Orientia tsutsugamushi str. Ikeda] gi|189180878|dbj|BAG40658.1| GTP-binding protein, Era/Obg family [Orientia tsutsugamushi str. Ikeda] Length = 366 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 22/106 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST ++T + + +YPF T+ PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTATQSANVGNYPFCTIEPNIGIVAVPDHRLQKLADIAGSQSII 65 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 Y +F+ DI G++K A G G+G++FL H ++H++ + Sbjct: 66 PTYVKFV--DIAGLVKGASSGEGLGNKFLSHIREVDAIIHVLRCFD 109 >gi|126727677|ref|ZP_01743509.1| translation-associated GTPase [Rhodobacterales bacterium HTCC2150] gi|126703093|gb|EBA02194.1| translation-associated GTPase [Rhodobacterales bacterium HTCC2150] Length = 365 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+G+PN GKST ++T+ A + A++PF T+ PN+G V G K I Sbjct: 6 GIVGMPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGEVAVPDARIDVLAEIAGSKSII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A QG G+G++FL + + H++ E++ Sbjct: 66 PTRMTFVDIAGLVKGASQGEGLGNQFLANIRECDTIAHVLRCFEDD 111 >gi|118462264|ref|YP_880478.1| GTP-dependent nucleic acid-binding protein EngD [Mycobacterium avium 104] gi|118163551|gb|ABK64448.1| GTP-binding protein YchF [Mycobacterium avium 104] Length = 350 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 17/103 (16%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYK-EFILA-- 211 +GLPN GKST ++TR A+YPF T+ PN G+V E +K E I+A Sbjct: 1 MGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVPLPDPRLDKLAEMFKSERIVAAP 60 Query: 212 ----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +GAG+G++FL H + +V ++ Sbjct: 61 VTFVDIAGLVKGASEGAGLGNKFLAHIRECDAICQVVRVFADD 103 >gi|91205672|ref|YP_538027.1| translation-associated GTPase [Rickettsia bellii RML369-C] gi|157826868|ref|YP_001495932.1| GTP-dependent nucleic acid-binding protein EngD [Rickettsia bellii OSU 85-389] gi|91069216|gb|ABE04938.1| GTP-binding protein YchF [Rickettsia bellii RML369-C] gi|157802172|gb|ABV78895.1| translation-associated GTPase [Rickettsia bellii OSU 85-389] Length = 365 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 22/108 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKST ++T + + A+YPF T+ PN +V Sbjct: 5 LGIVGLPNVGKSTLFNALTASVAAEAANYPFCTIEPNSAVVSVPDERLHKLAALVGSKKI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y EF+ DI G++K A +G G+G++FL + +LH++ E+ Sbjct: 65 IPSYIEFV--DIAGLVKGASKGEGLGNKFLSNIREVDAILHVLRCFED 110 >gi|83313445|ref|YP_423709.1| GTP-dependent nucleic acid-binding protein EngD [Magnetospirillum magneticum AMB-1] gi|82948286|dbj|BAE53150.1| Predicted GTPase, probable translation factor [Magnetospirillum magneticum AMB-1] Length = 367 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 18/107 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKST ++T A + A+YPF T+ PN+G V K Sbjct: 4 NCGIVGLPNVGKSTLFNALTSTAAAQAANYPFCTIEPNVGRVAVPDPRLDRLVVIGKSQK 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 E + DI G+++ A +G G+G++FL + ++H++ E+ Sbjct: 64 EIPTQLEFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFED 110 >gi|317154653|ref|YP_004122701.1| GTP-binding protein YchF [Desulfovibrio aespoeensis Aspo-2] gi|316944904|gb|ADU63955.1| GTP-binding protein YchF [Desulfovibrio aespoeensis Aspo-2] Length = 365 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 18/107 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-----------------KE 203 IGI+GLPN GKST ++T+A+ + A+Y F T+ PN +V + Sbjct: 5 IGIVGLPNVGKSTLFNALTKAQNAECANYAFCTIEPNKAVVPVPDPRLQVLADLVRPQRV 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++ A +G G+G++FL + T +LH+V +++ Sbjct: 65 QHSTVDFVDIAGLVAGASKGEGLGNKFLANIRETQAILHVVRCFDDD 111 >gi|297527580|ref|YP_003669604.1| GTPase of unknown function domain protein [Staphylothermus hellenicus DSM 12710] gi|297256496|gb|ADI32705.1| GTPase of unknown function domain protein [Staphylothermus hellenicus DSM 12710] Length = 409 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 25/110 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI---------VKEGYKE----- 207 IGIIG N GKST A++T A IA++PFTT+ PN+G+ V+ G ++ Sbjct: 8 IGIIGKTNVGKSTLFAALTLAPVAIANHPFTTIKPNIGVGYVRKKCVHVELGLEKCDPRT 67 Query: 208 --------FI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 FI + D+ G+I A QG G+G++F+ + VL+H+V A Sbjct: 68 GICIKGNRFIPVKIMDVAGLIPGASQGKGLGNKFMDDLRQADVLIHVVDA 117 >gi|212223502|ref|YP_002306738.1| predicted GTPase [Thermococcus onnurineus NA1] gi|212008459|gb|ACJ15841.1| predicted GTPase [Thermococcus onnurineus NA1] Length = 358 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 20/170 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + + I G PN GKST L ++T AKP++A YPFTT N+G +E Y ++ + D PG++ Sbjct: 167 LPTVVIAGHPNVGKSTLLRALTNAKPEVASYPFTTKGINVGQFEEHYLKYQVIDTPGLLD 226 Query: 219 NAHQGAGIGDR----FLKHTERTHVLLHIVSALE------ENVQAAYQCILDELSAYNSE 268 +R LKH R V+++I E E ++ I +E + Sbjct: 227 RPLSERNEIERQAILALKHLGR--VIVYIFDPSEYCGFPIEEQMHLFEEIYEEFKDFPF- 283 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 IV L+++D D + + R+ E G P S++ G G+ ++ Sbjct: 284 ------IVVLNKVDIADEEKI-RQVEEFVKSKGLKPLRISALNGEGLNEL 326 >gi|323450780|gb|EGB06660.1| hypothetical protein AURANDRAFT_54165 [Aureococcus anophagefferens] Length = 398 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 19/108 (17%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIV-----------------KEG 204 GI+GLPN GKST ++T + A+YPF T+ PN+G+V K Sbjct: 38 GIVGLPNVGKSTLFNALTEDVNAEAANYPFCTIEPNVGVVSVPDARLAALSDIHDSEKTV 97 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI G++K A +G G+G++FL + ++H+V +ENV Sbjct: 98 ATSLEFVDIAGLVKGASKGEGLGNQFLANIRECDAIVHVVRCFDDENV 145 >gi|255020867|ref|ZP_05292923.1| GTP-binding and nucleic acid-binding protein YchF [Acidithiobacillus caldus ATCC 51756] gi|254969658|gb|EET27164.1| GTP-binding and nucleic acid-binding protein YchF [Acidithiobacillus caldus ATCC 51756] Length = 363 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 25/142 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN+GIV+ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGIAAENYPFCTIEPNVGIVEVPDTRLQALADIVKPQKVVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 EF+ DI G++ A QG G+G++FL H T + + ++ Q +D ++ Sbjct: 66 ATMEFV--DIAGLVAGAAQGEGLGNQFLAHIRETAAIALVTRCFVDDNVVHVQGRVDPVA 123 Query: 264 AYNSELRKKIEIVGLSQIDTVD 285 + L + I L+ + TV+ Sbjct: 124 DLDVVLTELI----LADLSTVE 141 >gi|195350550|ref|XP_002041803.1| GM11387 [Drosophila sechellia] gi|194123608|gb|EDW45651.1| GM11387 [Drosophila sechellia] Length = 397 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 22/146 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IGI+G+PN GKSTF +T++ ++PF T+ PN + + E + + Sbjct: 24 IGIVGVPNVGKSTFFNVLTQSAAPAENFPFCTIKPNESRVPVPDERFDYLVEYHKPASVV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G++K A +G G+G+ FL H + H+ A E+ +V+ + D Sbjct: 84 PAYLNVVDIAGLVKGAAEGQGLGNDFLSHISACDAIFHLCRAFEDPDVTHVEGEVDPVRD 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDS 286 L + ELR K E L +D ++ Sbjct: 144 -LEIISEELRLKDEENLLKNLDKLEK 168 >gi|193083779|gb|ACF09462.1| GTP-binding and nucleic acid-binding protein YchF [uncultured marine crenarchaeote KM3-47-D6] Length = 403 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLY----------------------PNLG 199 IGIIG N GK+TF S T + +I+ YPFTT PN Sbjct: 5 IGIIGKTNTGKTTFFNSSTLSLDEISTYPFTTKKSSTSVGYAITLCVHSEFNVIDNPNNS 64 Query: 200 IVKEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 K+G++ L D+PG+IK+A +G G+G++FL ++ LLHIV A Sbjct: 65 KCKDGWRYIPIELIDLPGLIKDAWKGKGLGNQFLSIASQSDALLHIVDA 113 >gi|157962950|ref|YP_001502984.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella pealeana ATCC 700345] gi|157847950|gb|ABV88449.1| GTP-binding protein YchF [Shewanella pealeana ATCC 700345] Length = 363 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-----------YKEFILA 211 GI+GLPN GKST ++T+A + +++PF T+ PN G+V E +LA Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEASNFPFCTIEPNTGVVPVPDTRLDALAAIVKPERVLA 65 Query: 212 ------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDD 110 >gi|28805723|dbj|BAC59000.1| GTP-binding protein [Vibrio parahaemolyticus RIMD 2210633] Length = 383 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 26 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNPQKVLP 85 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ Sbjct: 86 TTMEFV--DIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENI 132 >gi|262274714|ref|ZP_06052525.1| GTP-binding and nucleic acid-binding protein YchF [Grimontia hollisae CIP 101886] gi|262221277|gb|EEY72591.1| GTP-binding and nucleic acid-binding protein YchF [Grimontia hollisae CIP 101886] Length = 363 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNPQRVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEND 110 >gi|225022948|ref|ZP_03712140.1| hypothetical protein CORMATOL_02994 [Corynebacterium matruchotii ATCC 33806] gi|305682061|ref|ZP_07404865.1| GTP-binding protein YchF [Corynebacterium matruchotii ATCC 14266] gi|224944171|gb|EEG25380.1| hypothetical protein CORMATOL_02994 [Corynebacterium matruchotii ATCC 33806] gi|305658534|gb|EFM48037.1| GTP-binding protein YchF [Corynebacterium matruchotii ATCC 14266] Length = 391 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY-KEFIL 210 +GI+GLPN GKST ++TR+ A+YPF T+ PN+G+V+ E + E IL Sbjct: 28 LGIVGLPNVGKSTLFNALTRSDVLAANYPFATIDPNIGLVELPDARLARLAEIFSSERIL 87 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI+K A G G G+ FL + + +V A +ENV Sbjct: 88 PATVSFVDIAGIVKGASHGEGRGNAFLANIREADAICQVVRAFADENV 135 >gi|319408912|emb|CBI82569.1| GTP-binding protein [Bartonella schoenbuchensis R1] Length = 367 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 18/104 (17%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTATAQAANYPFCTIEPNTGEVAVPDPRMEKIASIVGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 DI G+++ A +G G+G++FL + ++H++ E Sbjct: 66 PTRINFVDIAGLVRGASKGEGLGNKFLANIREVDAIIHVLRCFE 109 >gi|7018426|emb|CAB66481.1| hypothetical protein [Homo sapiens] gi|117645730|emb|CAL38332.1| hypothetical protein [synthetic construct] gi|208965304|dbj|BAG72666.1| Obg-like ATPase 1 [synthetic construct] Length = 396 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|24640873|ref|NP_572580.1| CG1354, isoform A [Drosophila melanogaster] gi|24640875|ref|NP_727362.1| CG1354, isoform C [Drosophila melanogaster] gi|24640877|ref|NP_727363.1| CG1354, isoform D [Drosophila melanogaster] gi|74866033|sp|Q8SWU7|Y1354_DROME RecName: Full=GTP-binding protein CG1354 gi|20152085|gb|AAM11402.1| RE21802p [Drosophila melanogaster] gi|22833044|gb|AAF46520.2| CG1354, isoform A [Drosophila melanogaster] gi|22833045|gb|AAN09613.1| CG1354, isoform C [Drosophila melanogaster] gi|22833046|gb|AAN09614.1| CG1354, isoform D [Drosophila melanogaster] gi|220948150|gb|ACL86618.1| CG1354-PA [synthetic construct] gi|220957388|gb|ACL91237.1| CG1354-PA [synthetic construct] gi|315075344|gb|ADT78478.1| AT07526p [Drosophila melanogaster] Length = 397 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 22/146 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IGI+G+PN GKSTF +T++ ++PF T+ PN + + E + + Sbjct: 24 IGIVGVPNVGKSTFFNVLTQSAAPAENFPFCTIKPNESRVPVPDERFDYLVEYHKPASVV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G++K A +G G+G+ FL H + H+ A E+ +V+ + D Sbjct: 84 PAYLNVVDIAGLVKGAAEGQGLGNDFLSHISACDAIFHLCRAFEDPDVTHVEGEVDPVRD 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDS 286 L + ELR K E L +D ++ Sbjct: 144 -LEIISEELRLKDEENLLKNLDKLEK 168 >gi|262394978|ref|YP_003286832.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio sp. Ex25] gi|262338572|gb|ACY52367.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio sp. Ex25] Length = 363 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNPQRVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ Sbjct: 66 TTMEFV--DIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENI 112 >gi|254510155|ref|ZP_05122222.1| GTP-binding protein YchF [Rhodobacteraceae bacterium KLH11] gi|221533866|gb|EEE36854.1| GTP-binding protein YchF [Rhodobacteraceae bacterium KLH11] Length = 365 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G V K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGDVAVPDDRLDKLAAIAASKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + T + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFED 110 >gi|167625130|ref|YP_001675424.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella halifaxensis HAW-EB4] gi|167355152|gb|ABZ77765.1| GTP-binding protein YchF [Shewanella halifaxensis HAW-EB4] Length = 363 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-----------YKEFILA 211 GI+GLPN GKST ++T+A + +++PF T+ PN G+V E +LA Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEASNFPFCTIEPNTGVVPVPDSRLDALAAIVKPERVLA 65 Query: 212 ------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDD 110 >gi|152987964|ref|YP_001350654.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas aeruginosa PA7] gi|150963122|gb|ABR85147.1| GTP-binding protein YchF [Pseudomonas aeruginosa PA7] Length = 366 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 27/139 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T++ ++PF T+ PN GIV E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLNALAEIVKPERV 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 DI G++ A +G G+G++FL + T + H+V E++ + + Sbjct: 64 LPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDD---------NVIH 114 Query: 264 AYNS-ELRKKIEIVGLSQI 281 NS + R+ IEI+ L I Sbjct: 115 VSNSVDPRRDIEIIDLELI 133 >gi|51473782|ref|YP_067539.1| translation-associated GTPase [Rickettsia typhi str. Wilmington] gi|51460094|gb|AAU04057.1| probable GTP-binding protein [Rickettsia typhi str. Wilmington] Length = 365 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV------------------- 201 +GI+GLPN GKST ++T ++ A+YPF T+ PN V Sbjct: 5 LGIVGLPNVGKSTLFNALTASQIADAANYPFCTIEPNSSKVLVPDERLQRLVSLAGSNKM 64 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y EF+ DI G++K A +G G+G++FL H +LH++ E++ Sbjct: 65 VPSYIEFV--DIAGLVKGASKGDGLGNKFLSHIREVDAILHVLRCFEDD 111 >gi|146276400|ref|YP_001166559.1| GTP-dependent nucleic acid-binding protein EngD [Rhodobacter sphaeroides ATCC 17025] gi|145554641|gb|ABP69254.1| GTP-binding protein YchF [Rhodobacter sphaeroides ATCC 17025] Length = 365 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++TR A + A++PF T+ PN+G V G ++ Sbjct: 5 MGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLDILAKIAGSRQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G+++ A +G G+G++FL + + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVRGASRGEGLGNQFLANIRECDAIAHVLRCFED 110 >gi|57640441|ref|YP_182919.1| translation-associated GTPase [Thermococcus kodakarensis KOD1] gi|57158765|dbj|BAD84695.1| predicted GTPase, containing TGS domain [Thermococcus kodakarensis KOD1] Length = 397 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 24/110 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV--------KE--------- 203 +IG++G PN GKSTF ++ T IA+YPFTT+ N+G+ KE Sbjct: 2 EIGLVGKPNVGKSTFFSAATLVDVDIANYPFTTIDANVGVTYAIAEHPCKELGCTPNPQN 61 Query: 204 -GYKE------FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 YK+ + D+ G++ AH+G G+G++FL L+H+V A Sbjct: 62 YEYKDGKALIPIKMIDVAGLVPGAHEGRGLGNKFLDDLRMASALIHVVDA 111 >gi|304415229|ref|ZP_07395935.1| putative GTP-binding protein [Candidatus Regiella insecticola LSR1] gi|304282918|gb|EFL91375.1| putative GTP-binding protein [Candidatus Regiella insecticola LSR1] Length = 363 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 18/107 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPVPDPRLDQLAEIVKPQRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI G++K A +G G+G++FL + T + H+V EN+ Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETDAIGHVVRCFANENI 112 >gi|269961563|ref|ZP_06175925.1| GTP-dependent nucleic acid-binding protein engD [Vibrio harveyi 1DA3] gi|269833604|gb|EEZ87701.1| GTP-dependent nucleic acid-binding protein engD [Vibrio harveyi 1DA3] Length = 383 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 26 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNPQKVLP 85 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V E + Sbjct: 86 TTMEFV--DIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFEND 130 >gi|167522160|ref|XP_001745418.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776376|gb|EDQ89996.1| predicted protein [Monosiga brevicollis MX1] Length = 394 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 19/108 (17%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 G++GLPN GKS+ F A + + + A+YPF T+ PN+G V + Sbjct: 37 GLVGLPNVGKSSLFNALLGTTQAEAANYPFCTIEPNVGTVLLPDERLDRLAHQQQAQRTV 96 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 Y DI G++++A QGAG+G++FL + +++H+V +ENV Sbjct: 97 YTTLQYVDIAGLVRDASQGAGLGNQFLANIRECDLVVHVVRVFPDENV 144 >gi|23015982|ref|ZP_00055744.1| COG0012: Predicted GTPase, probable translation factor [Magnetospirillum magnetotacticum MS-1] Length = 367 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 18/107 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKST ++T A + A+YPF T+ PN+G V K Sbjct: 4 NCGIVGLPNVGKSTLFNALTSTAAAQAANYPFCTIEPNVGRVAVPDPRLDRLVVIGKSQK 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 E + DI G+++ A +G G+G++FL + ++H++ E+ Sbjct: 64 EIPTQLEFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFED 110 >gi|269965461|ref|ZP_06179580.1| GTP-dependent nucleic acid-binding protein engD [Vibrio alginolyticus 40B] gi|269829940|gb|EEZ84170.1| GTP-dependent nucleic acid-binding protein engD [Vibrio alginolyticus 40B] Length = 383 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 26 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNPQRVLP 85 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ Sbjct: 86 TTMEFV--DIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENI 132 >gi|148377648|ref|YP_001256524.1| translation-associated GTPase [Mycoplasma agalactiae PG2] gi|148291694|emb|CAL59080.1| GTP binding protein [Mycoplasma agalactiae PG2] Length = 367 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST +++T+ + + ++Y FTT+ PN+ V K Sbjct: 6 GIVGLPNVGKSTLFSALTKHQVEASNYAFTTIDPNISSVALKDQRLVELAKIVNPAKIVP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 F DI G++K A +G G+G++FL + ++H+V E Sbjct: 66 ATFDFVDIAGLVKGASKGEGLGNKFLSNIREVDAIIHVVRCFE 108 >gi|114581804|ref|XP_515918.2| PREDICTED: Obg-like ATPase 1 isoform 2 [Pan troglodytes] Length = 472 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 101 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 160 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 161 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 206 >gi|84500096|ref|ZP_00998362.1| GTP-binding protein YchF [Oceanicola batsensis HTCC2597] gi|84392030|gb|EAQ04298.1| GTP-binding protein YchF [Oceanicola batsensis HTCC2597] Length = 365 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++TR A + A++PF T+ PN+G V KE Sbjct: 5 MGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLETLAGIAKSKEI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIREVDAIAHVLRCFED 110 >gi|218249513|ref|YP_002374758.1| GTP-binding protein YchF [Borrelia burgdorferi ZS7] gi|221217775|ref|ZP_03589243.1| GTP-binding protein YchF [Borrelia burgdorferi 72a] gi|223888810|ref|ZP_03623401.1| GTP-binding protein YchF [Borrelia burgdorferi 64b] gi|225550181|ref|ZP_03771141.1| GTP-binding protein YchF [Borrelia burgdorferi 118a] gi|226321553|ref|ZP_03797079.1| GTP-binding protein YchF [Borrelia burgdorferi Bol26] gi|218164701|gb|ACK74762.1| GTP-binding protein YchF [Borrelia burgdorferi ZS7] gi|221192452|gb|EEE18671.1| GTP-binding protein YchF [Borrelia burgdorferi 72a] gi|223885626|gb|EEF56725.1| GTP-binding protein YchF [Borrelia burgdorferi 64b] gi|225369293|gb|EEG98746.1| GTP-binding protein YchF [Borrelia burgdorferi 118a] gi|226232742|gb|EEH31495.1| GTP-binding protein YchF [Borrelia burgdorferi Bol26] Length = 368 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST +S+T + +IA+YPF T+ PN+GIV+ Sbjct: 6 GIVGLPNVGKSTLFSSLTSSNVEIANYPFCTIEPNIGIVEIPDERLLKISECIIPRKIIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A G G+G++FL + +++H++ EE Sbjct: 66 AVMEFV--DIAGLVKGASTGEGLGNKFLANIREVSLIVHVIRCFEE 109 >gi|109100087|ref|XP_001088356.1| PREDICTED: obg-like ATPase 1-like isoform 6 [Macaca mulatta] Length = 416 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 45 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 104 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 105 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 150 >gi|332796507|ref|YP_004458007.1| GTPase domain-containing protein [Acidianus hospitalis W1] gi|332694242|gb|AEE93709.1| GTPase of unknown function domain protein [Acidianus hospitalis W1] Length = 401 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------VKEGYK-------- 206 +G+IG N GKSTF ++ T +IA+ PF T+ PN+G+ V +K Sbjct: 4 VGLIGKTNVGKSTFFSAATLVDVEIANRPFVTIEPNVGMAYVKTLCVHNEFKVKCNPRNS 63 Query: 207 ------EFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 FI L D+ G+I AH+G G+G++FL + VL+H++ A Sbjct: 64 ICIGDYRFIPIKLVDVAGLIPGAHEGRGLGNKFLDDLRKADVLIHVIDA 112 >gi|308505772|ref|XP_003115069.1| CRE-TAG-210 protein [Caenorhabditis remanei] gi|308259251|gb|EFP03204.1| CRE-TAG-210 protein [Caenorhabditis remanei] Length = 397 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +GI+GLPN GKSTF +T+++ + ++PF T+ PN + + + + + Sbjct: 24 VGILGLPNVGKSTFFNVLTKSEAQAENFPFCTIDPNESRVAVQDDRFDWLVNHYKPASKV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G+ FL H L H+ A +++ Sbjct: 84 PAFLNVTDIAGLVKGASEGQGLGNAFLSHVSACDALFHLCRAFDDD 129 >gi|194890384|ref|XP_001977300.1| GG18324 [Drosophila erecta] gi|190648949|gb|EDV46227.1| GG18324 [Drosophila erecta] Length = 397 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 22/146 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IGI+G+PN GKSTF +T++ ++PF T+ PN + + E + + Sbjct: 24 IGIVGVPNVGKSTFFNVLTQSAAPAENFPFCTIKPNESRVPVPDERFDYLVEYHKPASVV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G++K A +G G+G+ FL H + H+ A E+ +V+ + D Sbjct: 84 PAYLNVVDIAGLVKGAAEGQGLGNDFLSHISACDAIFHLCRAFEDPDVTHVEGEVDPVRD 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDS 286 L + ELR K E L +D ++ Sbjct: 144 -LEIISEELRLKDEENLLKNLDKLEK 168 >gi|74316408|ref|YP_314148.1| GTP-dependent nucleic acid-binding protein EngD [Thiobacillus denitrificans ATCC 25259] gi|74055903|gb|AAZ96343.1| Conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 363 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A +YPF T+ PN G+V+ Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIAAENYPFCTIEPNTGVVEVPDPRLDELAKVVKPQRVVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++ A +G G+G++FL + T + H+V +ENV Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAICHVVRCFHDENV 112 >gi|268561774|ref|XP_002646525.1| C. briggsae CBR-TAG-210 protein [Caenorhabditis briggsae] gi|187023435|emb|CAP37396.1| CBR-TAG-210 protein [Caenorhabditis briggsae AF16] Length = 395 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +GI+GLPN GKSTF +T+++ + ++PF T+ PN + + + + + Sbjct: 24 VGILGLPNVGKSTFFNVLTKSEAQAENFPFCTIDPNESRVAVQDDRFDWLVNHYKPASKV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G+ FL H L H+ A +++ Sbjct: 84 PAFLNVTDIAGLVKGASEGQGLGNAFLSHVSACDALFHLCRAFDDD 129 >gi|17509631|ref|NP_493349.1| Temporarily Assigned Gene name family member (tag-210) [Caenorhabditis elegans] gi|3183247|sp|P91917|TG210_CAEEL RecName: Full=Putative GTP-binding protein tag-210 gi|3880615|emb|CAB07131.1| C. elegans protein W08E3.3a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 395 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +GI+GLPN GKSTF +T+++ + ++PF T+ PN + + + + + Sbjct: 24 VGILGLPNVGKSTFFNVLTKSEAQAENFPFCTIDPNESRVAVQDDRFDWLVNHYKPASKV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G+ FL H L H+ A +++ Sbjct: 84 PAFLNVTDIAGLVKGASEGQGLGNAFLSHVSACDALFHLCRAFDDD 129 >gi|332993709|gb|AEF03764.1| GTP-binding protein YchF [Alteromonas sp. SN2] Length = 363 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 27/143 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++T+A + A++PF T+ PN G+V + E + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDKLAEIVNPQRVIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV--QAAYQCILDEL 262 DI G+++ A +G G+G++FL + T + H+V +EN+ A D++ Sbjct: 66 TTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIGHVVRCFDDENIVHVAGKVNPQDDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVD 285 N+EL LS ++T + Sbjct: 126 DIINTEL-------ALSDLETTE 141 >gi|326423677|ref|NP_759269.2| GTP-binding and nucleic acid-binding protein YchF [Vibrio vulnificus CMCP6] gi|37197850|dbj|BAC93688.1| predicted GTPase [Vibrio vulnificus YJ016] gi|319999032|gb|AAO08796.2| GTP-binding and nucleic acid-binding protein YchF [Vibrio vulnificus CMCP6] Length = 383 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 26 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDELAKIVNPQRILP 85 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ Sbjct: 86 TTMEFV--DIAGLVAGASRGEGLGNKFLANIRETDAIGHVVRCFENENI 132 >gi|114561900|ref|YP_749413.1| translation-associated GTPase [Shewanella frigidimarina NCIMB 400] gi|114333193|gb|ABI70575.1| GTP-binding protein YchF [Shewanella frigidimarina NCIMB 400] Length = 363 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPVPDARLDALAAIVKPQRILP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL + T + H+V E+ Sbjct: 66 TSMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFED 109 >gi|74195449|dbj|BAE39543.1| unnamed protein product [Mus musculus] Length = 396 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPESKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|332209351|ref|XP_003253776.1| PREDICTED: obg-like ATPase 1 [Nomascus leucogenys] Length = 396 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|156085942|ref|XP_001610380.1| GTPase family protein [Babesia bovis T2Bo] gi|154797633|gb|EDO06812.1| GTPase family protein [Babesia bovis] Length = 548 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 53/80 (66%) Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 K+ ++AD+PG+I+ A G G+G +FLKH E ++VL +++ + + Y + +E+ Y Sbjct: 322 KQLVIADVPGLIQGASSGKGLGHKFLKHIENSNVLTYVIDSSVTDPLQDYIDVKNEIFTY 381 Query: 266 NSELRKKIEIVGLSQIDTVD 285 N +L ++E++ L++ID +D Sbjct: 382 NPDLLSRLELIILNKIDLID 401 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 47/74 (63%) Query: 129 HFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIAD 188 ++K+ N P+ G G ++ + L K++ ++ +IG PN+GKS+ L ++ A+P++++ Sbjct: 14 YYKTKFNPTPHVCELGEEGFKRELLLNYKMLGNLALIGKPNSGKSSLLRCLSNARPRVSN 73 Query: 189 YPFTTLYPNLGIVK 202 F+T +P LG+ K Sbjct: 74 QAFSTKFPILGVFK 87 >gi|21313144|ref|NP_080218.1| obg-like ATPase 1 isoform a [Mus musculus] gi|25453239|sp|Q9CZ30|OLA1_MOUSE RecName: Full=Obg-like ATPase 1; AltName: Full=GTP-binding protein 9 gi|12850183|dbj|BAB28624.1| unnamed protein product [Mus musculus] gi|15030131|gb|AAH11318.1| Obg-like ATPase 1 [Mus musculus] gi|20810567|gb|AAH29207.1| Obg-like ATPase 1 [Mus musculus] gi|123208561|emb|CAM17550.1| Obg-like ATPase 1 [Mus musculus] gi|123233184|emb|CAM19352.1| Obg-like ATPase 1 [Mus musculus] Length = 396 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|90085234|dbj|BAE91358.1| unnamed protein product [Macaca fascicularis] Length = 416 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 45 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 104 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 105 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 150 >gi|47550713|ref|NP_999865.1| obg-like ATPase 1 [Danio rerio] gi|82188398|sp|Q7ZU42|OLA1_DANRE RecName: Full=Obg-like ATPase 1 gi|29881535|gb|AAH51155.1| Zgc:55768 [Danio rerio] gi|45709500|gb|AAH67579.1| Zgc:55768 [Danio rerio] Length = 396 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 22/134 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IGI+GLPN GKSTF +T+++ ++PF T+ PN + I E + +F+ Sbjct: 25 IGIVGLPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPIPDERF-DFLCQYHKPASK 83 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 + DI G++K AH G G+G+ FL + + H+ A E E++ C+ + Sbjct: 84 VPAFLNVVDIAGLVKGAHAGQGLGNAFLSNIFACDAIFHMTRAFEDEDIIHVEGCVDPVR 143 Query: 261 ELSAYNSELRKKIE 274 ++ + ELR K E Sbjct: 144 DIEIIHEELRMKDE 157 >gi|152990452|ref|YP_001356174.1| GTP-binding protein [Nitratiruptor sp. SB155-2] gi|151422313|dbj|BAF69817.1| GTP-binding protein [Nitratiruptor sp. SB155-2] Length = 365 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIV-----------------KE 203 +GI+GLPN GKST ++T+A+ A +YPF T+ PN +V + Sbjct: 5 VGIVGLPNVGKSTTFNALTKAQNAEAQNYPFCTIEPNKAVVPVPDPRLQELAKIVNPQRV 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G++K A +G G+G++FL + T ++LH+V ++ Sbjct: 65 QHSTIDFVDIAGLVKGASKGEGLGNQFLSNIRETDMILHMVRCFDD 110 >gi|114051331|ref|NP_001039510.1| obg-like ATPase 1 [Bos taurus] gi|297465061|ref|XP_002703639.1| PREDICTED: Obg-like ATPase 1-like [Bos taurus] gi|122135688|sp|Q2HJ33|OLA1_BOVIN RecName: Full=Obg-like ATPase 1 gi|87578261|gb|AAI13337.1| Obg-like ATPase 1 [Bos taurus] gi|296490699|gb|DAA32812.1| Obg-like ATPase 1 [Bos taurus] Length = 396 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|281200747|gb|EFA74965.1| GTP-binding protein [Polysphondylium pallidum PN500] Length = 450 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 62/108 (57%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIV------------------KE 203 GI+GLPN GKST ++T ++ +A ++PF T+ PN+G+V K Sbjct: 63 GIVGLPNVGKSTLFNALTSSQAAMAANFPFCTIDPNVGLVFVPDERLDLISKKLNTKSKV 122 Query: 204 GYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 G + EF+ DI G++K A G G+G++FL + + +++H+V E++ Sbjct: 123 GTQLEFV--DIAGLVKGAADGEGLGNKFLANIRQVSLIVHLVRCFEDS 168 >gi|194680742|ref|XP_001789597.1| PREDICTED: Obg-like ATPase 1-like [Bos taurus] gi|297492641|ref|XP_002699746.1| PREDICTED: Obg-like ATPase 1-like [Bos taurus] gi|296471121|gb|DAA13236.1| Obg-like ATPase 1-like [Bos taurus] Length = 396 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|114777716|ref|ZP_01452676.1| hypothetical protein SPV1_08611 [Mariprofundus ferrooxydans PV-1] gi|114551932|gb|EAU54466.1| hypothetical protein SPV1_08611 [Mariprofundus ferrooxydans PV-1] Length = 364 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 22/110 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------K 202 IGI+GLPN GKST ++ + A+YPF T+ PN+GIV + Sbjct: 5 IGIVGLPNVGKSTLFNALNGGGAEAANYPFCTIDPNVGIVPVPDARMDALAAIVKPQAMQ 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A G G+G++FL + + H+V E EN+ Sbjct: 65 HAVVEFV--DIAGLVAGAASGEGLGNKFLANIRECAAIAHVVRCFEDENI 112 >gi|58761500|ref|NP_037473.3| obg-like ATPase 1 isoform 1 [Homo sapiens] gi|109100089|ref|XP_001088468.1| PREDICTED: obg-like ATPase 1-like isoform 7 [Macaca mulatta] gi|114581806|ref|XP_001148249.1| PREDICTED: GTP-binding protein PTD004 isoform 1 [Pan troglodytes] gi|291391759|ref|XP_002712341.1| PREDICTED: Obg-like ATPase 1 [Oryctolagus cuniculus] gi|25453240|sp|Q9NTK5|OLA1_HUMAN RecName: Full=Obg-like ATPase 1; AltName: Full=GTP-binding protein 9 gi|146387021|pdb|2OHF|A Chain A, Crystal Structure Of Human Ola1 In Complex With Amppcp gi|33150754|gb|AAP97255.1|AF134478_1 GTP-binding protein [Homo sapiens] gi|5531833|gb|AAD44491.1| PTD004 [Homo sapiens] gi|15277484|gb|AAH12842.1| Obg-like ATPase 1 [Homo sapiens] gi|20810193|gb|AAH29376.1| Obg-like ATPase 1 [Homo sapiens] gi|60688488|gb|AAH91522.1| Obg-like ATPase 1 [Homo sapiens] gi|82400016|gb|ABB72766.1| DNA damage-regulated overexpressed in cancer 45 protein [Homo sapiens] gi|119631556|gb|EAX11151.1| GTP-binding protein PTD004, isoform CRA_c [Homo sapiens] Length = 396 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|149730732|ref|XP_001499403.1| PREDICTED: similar to Obg-like ATPase 1 (GTP-binding protein 9) isoform 1 [Equus caballus] Length = 396 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|67923117|ref|ZP_00516607.1| Conserved hypothetical protein 92:GTP-binding [Crocosphaera watsonii WH 8501] gi|67855015|gb|EAM50284.1| Conserved hypothetical protein 92:GTP-binding [Crocosphaera watsonii WH 8501] Length = 363 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST F A V AK A++PF T+ PN+G+V Sbjct: 5 GIVGLPNVGKSTLFNALVANAKADAANFPFCTIEPNVGVVSVPDERLAVLAELSQSQKIV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+++ A +G G+G++FL + ++H+V +++ Sbjct: 65 PTRMEFV--DIAGLVQGASKGEGLGNQFLANIREVDAIVHVVRCFDDD 110 >gi|198467440|ref|XP_001354398.2| GA12352 [Drosophila pseudoobscura pseudoobscura] gi|198149246|gb|EAL31451.2| GA12352 [Drosophila pseudoobscura pseudoobscura] Length = 397 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 22/145 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IGI+G+PN GKSTF +T + ++PF T+ PN + + E + + Sbjct: 24 IGIVGVPNVGKSTFFNVLTESAAPAENFPFCTIKPNESRVPVPDERFDYLVEYHKPASVV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G++K A +G G+G+ FL H + H+ A E+ +V+ + D Sbjct: 84 PAYLNVVDIAGLVKGAAEGQGLGNDFLSHISACDAIFHLCRAFEDPDVTHVEGEVDPVRD 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVD 285 L + ELR K E L +D ++ Sbjct: 144 -LEIISEELRLKDEEKLLQNLDKLE 167 >gi|12846524|dbj|BAB27201.1| unnamed protein product [Mus musculus] Length = 396 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|254572521|ref|XP_002493370.1| Protein with similarity to mammalian developmentally regulated GTP-binding protein [Pichia pastoris GS115] gi|238033168|emb|CAY71191.1| Protein with similarity to mammalian developmentally regulated GTP-binding protein [Pichia pastoris GS115] gi|328352615|emb|CCA39013.1| GTP-binding protein RBG1 [Pichia pastoris CBS 7435] Length = 367 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 51/87 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+FL +T K ++A Y FTTL G+++ E + D+PGIIK Sbjct: 64 ARVALIGFPSVGKSSFLGKITSTKSEVAQYSFTTLTSVPGVLQYEGAEIQIVDLPGIIKG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 A +G G G + + + ++L ++ A Sbjct: 124 ASEGKGRGRQVVATAKTADLILMVLDA 150 >gi|62822230|gb|AAY14779.1| unknown [Homo sapiens] Length = 183 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 22/134 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILD 260 + DI G++K AH G G+G+ FL H + H+ A E++ V+ + I D Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDDDITHVEGSVDPIRD 144 Query: 261 ELSAYNSELRKKIE 274 + + EL+ K E Sbjct: 145 -IEIIHEELQLKDE 157 >gi|73668606|ref|YP_304621.1| translation-associated GTPase [Methanosarcina barkeri str. Fusaro] gi|72395768|gb|AAZ70041.1| GTP-binding conserved hypothetical protein TIGR00650 [Methanosarcina barkeri str. Fusaro] Length = 394 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 20/105 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV--------KEGYKE------ 207 IG+ G PNAGKSTF + T A +IA+YPFTT+ N G+ KE K Sbjct: 5 IGLAGKPNAGKSTFFKAATLADVEIANYPFTTINANHGVTYVRVECPCKEKEKRCGKCVD 64 Query: 208 ------FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 + D+ G++ +A++G G+G+ FL + ++H+V A Sbjct: 65 GVRLVPIDIIDVAGLVPDAYKGRGLGNTFLDELRQAQAIIHVVDA 109 >gi|68000710|ref|XP_669694.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56484176|emb|CAI01311.1| hypothetical protein PB300153.00.0 [Plasmodium berghei] Length = 103 Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 52/93 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+ +T ++ADY FTTL GI+ + L D+PGII+ Sbjct: 5 ARVCLIGFPSVGKSTLLSKITNTTSEVADYEFTTLTCKPGIINHKDSKIQLLDLPGIIQG 64 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A +G G G + + + +++ ++ +N Q Sbjct: 65 ASEGRGRGRQVIAVAKSCDMIMMVLDTTRDNSQ 97 >gi|189241344|ref|XP_969865.2| PREDICTED: similar to GTP binding protein [Tribolium castaneum] Length = 399 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 22/149 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 +GI+G+PN GKSTF +T++ ++PF T+ PN V F Sbjct: 24 VGIVGIPNVGKSTFFNVLTKSSAAAENFPFCTIDPNESRVPVPDDRFDYLCDYFKPASKV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILD 260 + DI G++K A +G G+G+ FL H + H+ A E++ V+ + D Sbjct: 84 PAFLNIVDIAGLVKGASEGQGLGNAFLSHISACDAIFHLCRAFEDDDVTHVEGEVNPVRD 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 L ELR K E L ++ ++ L Sbjct: 144 -LDIIAEELRLKDEDTLLKNMEKLERTVL 171 >gi|145342229|ref|XP_001416160.1| Nucleic acid binding GTPase, translation factor, putative [Ostreococcus lucimarinus CCE9901] gi|144576385|gb|ABO94453.1| Nucleic acid binding GTPase, translation factor, putative [Ostreococcus lucimarinus CCE9901] Length = 419 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V ++ + A++PF T+ PN G V G K + Sbjct: 54 GIVGLPNVGKSTLFNALVENSRAQAANFPFCTIEPNFGTVPVLDGRLDVLARISGTKNIV 113 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+++ A +G G+G++FL + ++H+V +++ Sbjct: 114 PTAVEIVDIAGLVEGASEGQGLGNKFLANIRECDAIIHVVRCFDDD 159 >gi|197102254|ref|NP_001127505.1| obg-like ATPase 1 [Pongo abelii] gi|75054890|sp|Q5R821|OLA1_PONAB RecName: Full=Obg-like ATPase 1 gi|55730737|emb|CAH92089.1| hypothetical protein [Pongo abelii] Length = 396 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDSLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|329766583|ref|ZP_08258126.1| translation-associated GTPase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329136838|gb|EGG41131.1| translation-associated GTPase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 399 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 22/108 (20%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--VKEGY----------- 205 + IG++G N GKSTF ++ T I ++PFTT+ PN+G+ VK Sbjct: 3 VLQIGLLGKANVGKSTFFSAATETPVSIGNFPFTTIQPNVGVAYVKSDCACKHFEIKHQN 62 Query: 206 ------KEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 FI L D+ G++ AH+G G+G++FL + VL+H+V Sbjct: 63 SLCVNGTRFIPVKLIDVAGLVPGAHEGKGLGNQFLDDARQAEVLIHVV 110 >gi|212550627|ref|YP_002308944.1| GTP-dependent nucleic acid-binding protein EngD [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548865|dbj|BAG83533.1| putative translation factor EngD [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 367 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------KEGYKEFI------- 209 GI+GLPN GKST ++ K + A++PF T+ PNL + +E + Sbjct: 6 GIVGLPNVGKSTLFNCLSNTKAQAANFPFCTIKPNLCTIIVPDERLNKLEELVKPQKVIP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL T ++HI+ +++ Sbjct: 66 ATVEIVDIAGLLKGASRGEGLGNKFLAKIRETDAIIHILRCFDDD 110 >gi|126739649|ref|ZP_01755341.1| translation-associated GTPase [Roseobacter sp. SK209-2-6] gi|126719295|gb|EBA16005.1| translation-associated GTPase [Roseobacter sp. SK209-2-6] Length = 365 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G V K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTKTASAQAANFPFCTIEPNVGEVGVPDERLDKLAAIASSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + T + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFED 110 >gi|192362469|ref|YP_001981162.1| GTP-binding protein YchF [Cellvibrio japonicus Ueda107] gi|190688634|gb|ACE86312.1| GTP-binding protein YchF [Cellvibrio japonicus Ueda107] Length = 363 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 17/107 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------KEGYKEFI----- 209 + GI+GLPN GKST ++T A ++PF T+ PN GIV ++ E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTNAGISAENFPFCTIEPNAGIVVVPDPRQDKLAEIVKPERI 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 64 VPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDD 110 >gi|119477475|ref|ZP_01617666.1| predicted GTPase, probable translation factor [marine gamma proteobacterium HTCC2143] gi|119449401|gb|EAW30640.1| predicted GTPase, probable translation factor [marine gamma proteobacterium HTCC2143] Length = 363 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 22/111 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAGIDAENFPFCTIEPNSGIVPIPDPRQDKLADIVSPERV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G+++ A +G G+G++FL + T + H+V E ENV Sbjct: 64 VPTTMEFV--DIAGLVEGASKGEGLGNQFLANIRETDAIAHVVRCFENENV 112 >gi|170728021|ref|YP_001762047.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella woodyi ATCC 51908] gi|169813368|gb|ACA87952.1| GTP-binding protein YchF [Shewanella woodyi ATCC 51908] Length = 363 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + +++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEASNFPFCTIEPNTGVVPVPDARLDALAQIVNPERVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDD 110 >gi|152965092|ref|YP_001360876.1| GTP-dependent nucleic acid-binding protein EngD [Kineococcus radiotolerans SRS30216] gi|151359609|gb|ABS02612.1| GTP-binding protein YchF [Kineococcus radiotolerans SRS30216] Length = 361 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V K Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDALAANYPFATIEPNVGVVALPDPRLDELARVFSSEKTV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI+K A +G G+G++FL + + + A + Sbjct: 65 PAMVSFVDIAGIVKGASEGEGLGNKFLANIREADAICQVTRAFAD 109 >gi|169837899|ref|ZP_02871087.1| GTP-binding protein Obg/CgtA [candidate division TM7 single-cell isolate TM7a] Length = 102 Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 47/100 (47%), Positives = 69/100 (69%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D AKV++++G GG G +SFR E +I+ GGPDGG GG+GGDV +AT NLNTL DFR++ Sbjct: 2 FVDVAKVFVQAGKGGDGVVSFRHEIYIDKGGPDGGDGGKGGDVIFEATENLNTLADFRFK 61 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGI 102 KA++G+ G K + + ++ VP+GT V ++ I Sbjct: 62 PEIKAENGQNGAKAKGVVKQVKYKIVKVPMGTLVKRDNKI 101 >gi|157803536|ref|YP_001492085.1| GTP-dependent nucleic acid-binding protein EngD [Rickettsia canadensis str. McKiel] gi|157784799|gb|ABV73300.1| translation-associated GTPase [Rickettsia canadensis str. McKiel] Length = 365 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 22/108 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKST ++T ++ A+YPF T+ PN V Sbjct: 5 LGIVGLPNVGKSTLFNALTASQAADAANYPFCTIEPNSSKVSVPDKRLHKLASLTGSRKI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y +F+ DI G++K A +G G+G++FL H +LH++ E+ Sbjct: 65 ISSYIDFV--DIAGLVKGASKGEGLGNKFLSHIREVDAILHVLRCFED 110 >gi|323142933|ref|ZP_08077643.1| GTP-binding protein YchF [Succinatimonas hippei YIT 12066] gi|322417286|gb|EFY07910.1| GTP-binding protein YchF [Succinatimonas hippei YIT 12066] Length = 365 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 21/108 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTIEPNTGIVPVPDERLDKIAAIVNPQKI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL + T + H+V ++ Sbjct: 64 VPTAMEFV--DIAGLVKGASKGEGLGNQFLMNIRETDAIAHVVRCFDD 109 >gi|123208560|emb|CAM17549.1| Obg-like ATPase 1 [Mus musculus] gi|123233185|emb|CAM19353.1| Obg-like ATPase 1 [Mus musculus] Length = 281 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|256825821|ref|YP_003149781.1| GTP-dependent nucleic acid-binding protein EngD [Kytococcus sedentarius DSM 20547] gi|256689214|gb|ACV07016.1| GTP-binding protein YchF [Kytococcus sedentarius DSM 20547] Length = 361 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 17/103 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V G ++ + Sbjct: 5 IGIVGLPNVGKSTMFNALTKNNVLAANYPFATIEPNVGVVPLPDERLARLAEIFGSEKIL 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 A DI GI++ A +G G+G++FL + + +V A Sbjct: 65 PATVSFVDIAGIVRGASEGEGLGNKFLANIREADAICQVVRAF 107 >gi|195554639|ref|XP_002076931.1| GD24779 [Drosophila simulans] gi|194202949|gb|EDX16525.1| GD24779 [Drosophila simulans] Length = 383 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 22/145 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IGI+G+PN GKSTF +T++ ++PF T+ PN + + E + + Sbjct: 24 IGIVGVPNVGKSTFFNVLTQSAAPAENFPFCTIKPNESRVPVPDERFDYLVEYHKPASVV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G++K A +G G+G+ FL H + H+ A E+ +V+ + D Sbjct: 84 PAYLNVVDIAGLVKGAAEGQGLGNDFLSHISACDAIFHLCRAFEDPDVTHVEGEVDPVRD 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVD 285 L + ELR K E L +D ++ Sbjct: 144 -LEIISEELRLKDEENLLKNLDKLE 167 >gi|83644560|ref|YP_432995.1| GTP-dependent nucleic acid-binding protein EngD [Hahella chejuensis KCTC 2396] gi|83632603|gb|ABC28570.1| predicted GTPase, probable translation factor [Hahella chejuensis KCTC 2396] Length = 363 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 27/145 (18%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T+A ++PF T+ PN GIV + E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTQAGIDAENFPFCTIEPNSGIVAMPDPRLQKLAEIVKPQKV 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI--LD 260 DI G++ A +G G+G++FL + +T + H+V +ENV + Sbjct: 64 IPTTMEFVDIAGLVAGASKGEGLGNQFLANIRQTDAIAHVVRCFADENVVHVANKVDPAA 123 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVD 285 ++ N+EL L+ +DTV+ Sbjct: 124 DIDVINTEL-------ALADLDTVE 141 >gi|74004632|ref|XP_861290.1| PREDICTED: similar to Putative GTP-binding protein PTD004 isoform 4 [Canis familiaris] Length = 243 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|262276842|ref|ZP_06054635.1| GTP-binding protein YchF [alpha proteobacterium HIMB114] gi|262223945|gb|EEY74404.1| GTP-binding protein YchF [alpha proteobacterium HIMB114] Length = 358 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 18/104 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-----------KEGYKEFIL 210 GI+GLPN GKST ++T++K + A++PF T+ PN+G+V K E ++ Sbjct: 6 GIVGLPNVGKSTTFNALTKSKNAEAANFPFCTIEPNVGVVAVPDSRLDKISKIAKSEKVI 65 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 DI G+++ A +G G+G++FL H ++H++ + Sbjct: 66 NTLITFVDIAGLVEGASKGEGLGNKFLSHIREVDAIVHLLRCFD 109 >gi|194382940|dbj|BAG59026.1| unnamed protein product [Homo sapiens] Length = 273 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|156389448|ref|XP_001635003.1| predicted protein [Nematostella vectensis] gi|156222092|gb|EDO42940.1| predicted protein [Nematostella vectensis] Length = 392 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 24/131 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------- 209 GI+G+PN GKSTF +T++ ++PF T+ P V + +F+ Sbjct: 25 GIVGIPNVGKSTFFNVLTKSAASAENFPFCTIVP----VPDERWDFLCKYHQPASKVPAF 80 Query: 210 --LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELS 263 + DI G++K A +G G+G+ FL H + H+V A E +V+ + D L Sbjct: 81 LNVVDIAGLVKGASEGQGLGNAFLSHIWACDAIFHLVRAFEGEDVTHVEGDVNPVRD-LE 139 Query: 264 AYNSELRKKIE 274 + ELRKK E Sbjct: 140 IISEELRKKDE 150 >gi|27382550|ref|NP_774079.1| GTP-dependent nucleic acid-binding protein EngD [Bradyrhizobium japonicum USDA 110] gi|27355722|dbj|BAC52704.1| GTP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 365 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLG--------------IVKEGY-- 205 GI+GLPN GKST ++T A + A+YPF T+ PN+G I K G Sbjct: 6 GIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGEVAVPDPRLDKLAAIAKSGQII 65 Query: 206 -KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + + H+V E++ Sbjct: 66 PTRLTFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVVRCFEDS 111 >gi|226528389|ref|NP_001150211.1| GTP-binding protein PTD004 [Zea mays] gi|194703298|gb|ACF85733.1| unknown [Zea mays] gi|195637584|gb|ACG38260.1| GTP-binding protein PTD004 [Zea mays] Length = 393 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF VT+ ++PF T+ PN V + F Sbjct: 26 IGIVGLPNVGKSTFFNIVTKLAIPAENFPFCTIEPNEARVNVPDERFDWLCKLYKPKSEV 85 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+I+ AH G G+G+ FL H + H++ A E+ Sbjct: 86 PAYLEVTDIAGLIRGAHAGDGLGNAFLSHIRAVDGIFHVLRAFED 130 >gi|315268735|gb|ADT95588.1| GTP-binding protein YchF [Shewanella baltica OS678] Length = 402 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 45 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVNPQRVLP 104 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V +++ Sbjct: 105 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFDDD 149 >gi|282856257|ref|ZP_06265540.1| GTP-binding protein YchF [Pyramidobacter piscolens W5455] gi|282586016|gb|EFB91301.1| GTP-binding protein YchF [Pyramidobacter piscolens W5455] Length = 363 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 21/106 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +GI+GLPN GKST ++T A ++YPF T+ PN+G+V+ Sbjct: 3 LGIVGLPNVGKSTLFNAITAAGADASNYPFCTIEPNVGVVEVPDPRLKVLSDMFHSVKIT 62 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 EF DI G+++ A +G G+G++FL + ++ +V E Sbjct: 63 PAVVEFY--DIAGLVRGASKGEGLGNKFLANIREASAIVQVVRCFE 106 >gi|239789764|dbj|BAH71484.1| ACYPI004640 [Acyrthosiphon pisum] Length = 179 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T + + A Y FTTL G+++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTLLSTLTHTESEAASYEFTTLTCIPGVIEYKDANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A QG G G + + ++L ++ A ++++Q Q + EL + L K+ Sbjct: 122 ASQGKGRGRQVIAVARTADLVLMMLDATKQDIQ--RQLLEKELESVGIRLNKR 172 >gi|256422732|ref|YP_003123385.1| GTP-binding protein YchF [Chitinophaga pinensis DSM 2588] gi|256037640|gb|ACU61184.1| GTP-binding protein YchF [Chitinophaga pinensis DSM 2588] Length = 367 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIV----------KEGYK---- 206 +GI+GLPN GKST +V+ AK + ++Y F T+ PN+G+V +E K Sbjct: 5 VGIVGLPNVGKSTLFNAVSNSAKAQASNYRFCTIEPNVGLVDVPDERLAKLEELVKPERV 64 Query: 207 -----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++K A +G G+G++FL + ++H++ E EN+ Sbjct: 65 VPTTIEFV--DIAGLVKGASKGEGLGNKFLANIREVDAIVHVIRCFEDENI 113 >gi|104780082|ref|YP_606580.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas entomophila L48] gi|95109069|emb|CAK13765.1| putative GTP-binding protein [Pseudomonas entomophila L48] Length = 366 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 30/156 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T++ ++PF T+ PN GIV E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLNALAEIVKPNRI 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E ENV + Sbjct: 64 LPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV----------I 113 Query: 263 SAYNS-ELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 NS + ++ IEI+ L I D D+ ++ ++A Sbjct: 114 HVSNSVDPKRDIEIIDLELI-FADLDSCEKQLQKVA 148 >gi|24372768|ref|NP_716810.1| translation-associated GTPase [Shewanella oneidensis MR-1] gi|24346846|gb|AAN54255.1|AE015562_5 conserved hypothetical protein TIGR00092 [Shewanella oneidensis MR-1] Length = 363 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVNPQRVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V +++ Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFDDD 110 >gi|323359478|ref|YP_004225874.1| GTPase, probable translation factor [Microbacterium testaceum StLB037] gi|323275849|dbj|BAJ75994.1| predicted GTPase, probable translation factor [Microbacterium testaceum StLB037] Length = 357 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 17/100 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V G + + Sbjct: 5 IGIVGLPNVGKSTLFNALTKNSVLAANYPFATIEPNVGVVNLPDVRLQQLADVFGSERLV 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 A DI GI++ A +G G+G++FL + + +V Sbjct: 65 PAAVSFVDIAGIVRGASEGEGLGNQFLANIREADAIAQVV 104 >gi|240102748|ref|YP_002959057.1| translation-associated GTPase [Thermococcus gammatolerans EJ3] gi|239910302|gb|ACS33193.1| GTPase, MMR-HSR1 family [Thermococcus gammatolerans EJ3] Length = 397 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 26/111 (23%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------- 200 +IG++G PN GKSTF ++ T IA+YPFTT+ N+G+ Sbjct: 2 EIGVVGKPNVGKSTFFSAATLVDVDIANYPFTTIDANVGVSYAIAEHPCRELGCKPNPQN 61 Query: 201 --VKEGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 +EG K I + D+ G++ AH+G G+G++FL L+H++ A Sbjct: 62 YEYREG-KALIPIKMIDVAGLVPGAHEGRGLGNKFLDDLRMASALIHVIDA 111 >gi|76677915|ref|NP_084367.1| obg-like ATPase 1 isoform b [Mus musculus] gi|123208562|emb|CAM17551.1| Obg-like ATPase 1 [Mus musculus] gi|123233186|emb|CAM19354.1| Obg-like ATPase 1 [Mus musculus] Length = 270 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|149246842|ref|XP_001527846.1| hypothetical protein LELG_00366 [Lodderomyces elongisporus NRRL YB-4239] gi|146447800|gb|EDK42188.1| hypothetical protein LELG_00366 [Lodderomyces elongisporus NRRL YB-4239] Length = 413 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 26/111 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L ++T A K+ +PFTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNALTDANAKVGAFPFTTIDPNKATGYLEIDCACARFGKQDKCKPN 66 Query: 198 LGIVKEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G + G + +L D+ G++ NAH G G+G++FL L+HIV A Sbjct: 67 YGYCRNGKRGVPIMLLDVAGLVPNAHLGRGLGNKFLSDLTEADCLIHIVDA 117 >gi|119383088|ref|YP_914144.1| translation-associated GTPase [Paracoccus denitrificans PD1222] gi|119372855|gb|ABL68448.1| GTP-binding protein YchF [Paracoccus denitrificans PD1222] Length = 365 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G V G K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGEVAVPDPRLDKLAGIAGSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + + H++ E+ Sbjct: 65 IPTRITFVDIAGLVKGASKGEGLGNQFLANIREVDAIAHVLRCFED 110 >gi|149184483|ref|ZP_01862801.1| translation-associated GTPase [Erythrobacter sp. SD-21] gi|148831803|gb|EDL50236.1| translation-associated GTPase [Erythrobacter sp. SD-21] Length = 366 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T + + A+YPF T+ PN+G V G + I Sbjct: 6 GIVGLPNVGKSTLFNALTETQAAQAANYPFCTIEPNVGQVSVPDERLDKIAAIAGSAKII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A QG G+G++FL + ++H++ E++ Sbjct: 66 PTQLAFVDIAGLVKGASQGEGLGNQFLGNIREVDAIVHVLRCFEDD 111 >gi|319781880|ref|YP_004141356.1| GTP-binding protein YchF [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167768|gb|ADV11306.1| GTP-binding protein YchF [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 367 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 GI+GLPN GKST ++TR A + A+YPF T+ PN G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTRTAAAQAANYPFCTIEPNTGEVAVPDPRLQKIAAIGKSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDD 111 >gi|149525539|ref|XP_001517772.1| PREDICTED: similar to claudin 12, partial [Ornithorhynchus anatinus] Length = 207 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 14/126 (11%) Query: 192 TTLYPNLG-IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS----- 245 TT+ P LG I+ +K+ +AD+PG+I+ AH G+G RFLKH ERT LL +V Sbjct: 1 TTVKPELGKIMFPDHKQISVADLPGLIEGAHMNRGMGHRFLKHVERTKQLLFVVDVSGFQ 60 Query: 246 -ALEENVQAAYQCI---LDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 + + A++ I EL Y EL+ K ++ ++++D D++ K EL Q Sbjct: 61 LSSHSPFRTAFETIALLTKELELYQEELQAKPSLLVINKMDLPDAE---EKCEELLNQL- 116 Query: 302 QVPFEF 307 + P EF Sbjct: 117 KAPREF 122 >gi|325277191|ref|ZP_08142834.1| GTP-binding protein YchF [Pseudomonas sp. TJI-51] gi|324097677|gb|EGB95880.1| GTP-binding protein YchF [Pseudomonas sp. TJI-51] Length = 366 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 30/156 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T++ ++PF T+ PN GIV E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLAALAEIVKPNRI 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E ENV + Sbjct: 64 LPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV----------I 113 Query: 263 SAYNS-ELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 NS + ++ IEI+ L I D D+ ++ ++A Sbjct: 114 HVSNSVDPKRDIEIIDLELI-FADLDSCEKQLQKVA 148 >gi|150864205|ref|XP_001382937.2| hypothetical protein PICST_42420 [Scheffersomyces stipitis CBS 6054] gi|149385461|gb|ABN64908.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 368 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 53/87 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+FL+ VT K + A+Y FTTL GI++ E + D+PGIIK Sbjct: 65 ARVSLIGFPSVGKSSFLSKVTNTKSEAANYEFTTLTSVGGILEYNGAEVQIVDLPGIIKA 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 A +G G G + + + + +++ ++ A Sbjct: 125 AAKGKGRGRQVIAVSRTSDLIMMVLDA 151 >gi|13472408|ref|NP_103975.1| GTP-dependent nucleic acid-binding protein EngD [Mesorhizobium loti MAFF303099] gi|14023154|dbj|BAB49761.1| probable GTP-binding protein [Mesorhizobium loti MAFF303099] Length = 367 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 GI+GLPN GKST ++TR A + A+YPF T+ PN G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTRTAAAQAANYPFCTIEPNTGEVAVPDPRLQKIAAIGKSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDD 111 >gi|304391295|ref|ZP_07373239.1| GTP-binding protein YchF [Ahrensia sp. R2A130] gi|303296651|gb|EFL91007.1| GTP-binding protein YchF [Ahrensia sp. R2A130] Length = 367 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++TR A + A+YPF T+ PN G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNTGEVAVPDERIAKVAEIAKSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + +H++ E++ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNQFLANIREVDATVHVLRCFEDD 111 >gi|225706854|gb|ACO09273.1| GTP-binding protein PTD004 [Osmerus mordax] Length = 395 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 22/134 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IGI+G+PN GKSTF +T+++ ++PF T+ PN + I E Y Sbjct: 24 IGIVGIPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPIPDERYDYLCQFHKPLSKV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILD 260 + DI G++K AH G G+G+ FL H + H+ A +++ V+ + + D Sbjct: 84 PAFLNVVDIAGLVKGAHAGQGLGNAFLSHISACDGIFHMTRAFDDDDIIHVEGSIDPVRD 143 Query: 261 ELSAYNSELRKKIE 274 + + ELR K E Sbjct: 144 -IEIIHEELRLKDE 156 >gi|254486367|ref|ZP_05099572.1| GTP-binding protein YchF [Roseobacter sp. GAI101] gi|214043236|gb|EEB83874.1| GTP-binding protein YchF [Roseobacter sp. GAI101] Length = 368 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++TR A + A++PF T+ PN+G V K Sbjct: 8 MGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLDKLAEIAKSKSI 67 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + T + H++ E+ Sbjct: 68 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFED 113 >gi|217073648|gb|ACJ85184.1| unknown [Medicago truncatula] Length = 394 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------------KEGY 205 IGI+GLPN GKST ++T+ ++PF T+ PN V K Sbjct: 27 IGIVGLPNVGKSTLFNTLTKMAIPAENFPFCTIEPNEARVNVPDERFEWLCQLFKPKSEV 86 Query: 206 KEFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F+ + DI G+++ AHQG G+G+ FL H + H+ A E+ Sbjct: 87 SAFLEIHDIAGLVRGAHQGQGLGNSFLSHIRAVDGIFHVPRAFED 131 >gi|74004630|ref|XP_861260.1| PREDICTED: similar to Putative GTP-binding protein PTD004 isoform 3 [Canis familiaris] Length = 278 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|256827604|ref|YP_003151563.1| GTP-binding protein YchF [Cryptobacterium curtum DSM 15641] gi|256583747|gb|ACU94881.1| GTP-binding protein YchF [Cryptobacterium curtum DSM 15641] Length = 354 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 21/102 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V Sbjct: 5 IGIVGLPNVGKSTLFTALTKKGGLAANYPFATIEPNVGVVPVPDARLNRLAEIDHPARIV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 EF+ DI G++ A QG G+G++FL + T + +V Sbjct: 65 PATVEFV--DIAGLVAGASQGEGLGNQFLANIRETDAICEVV 104 >gi|254466908|ref|ZP_05080319.1| GTP-binding protein YchF [Rhodobacterales bacterium Y4I] gi|206687816|gb|EDZ48298.1| GTP-binding protein YchF [Rhodobacterales bacterium Y4I] Length = 365 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G V K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTKTASAQAANFPFCTIEPNVGEVAVPDARLDKLAEIAKSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + T + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFED 110 >gi|108759423|ref|YP_628676.1| GTP-dependent nucleic acid-binding protein EngD [Myxococcus xanthus DK 1622] gi|108463303|gb|ABF88488.1| GTP-binding protein YchF [Myxococcus xanthus DK 1622] Length = 369 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI+GLPN GKST +++ A + A+YPF T+ PN+G+V K+ Sbjct: 5 IGIVGLPNVGKSTLFNALSAAGAQAANYPFCTIEPNVGVVPVPDDRLDKLSALIKPLKKV 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + + + +LH++ E++ Sbjct: 65 PTSLEFVDIAGLVRGASKGEGLGNQFLGNIRQVNAVLHVLRCFEDD 110 >gi|312220926|emb|CBY00867.1| similar to GTP-binding protein [Leptosphaeria maculans] Length = 406 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 56/93 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL+ +T+ K + A Y FTTL G+++ G E + D+PGII+ Sbjct: 103 ARIALVGFPSVGKSTFLSRITKTKSEAAAYSFTTLTAIPGVLEYGGAEIQVLDLPGIIEG 162 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A +G G G + + + + ++ I+ A ++ Q Sbjct: 163 AAEGKGRGRQVISAAKTSDLICMILDATKKAEQ 195 >gi|148545999|ref|YP_001266101.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas putida F1] gi|148510057|gb|ABQ76917.1| GTP-binding protein YchF [Pseudomonas putida F1] Length = 366 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 30/156 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T++ ++PF T+ PN GIV E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLAALAEIVKPNRI 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E ENV + Sbjct: 64 LPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV----------I 113 Query: 263 SAYNS-ELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 NS + ++ IEI+ L I D D+ ++ ++A Sbjct: 114 HVSNSVDPKRDIEIIDLELI-FADLDSCEKQLQKVA 148 >gi|308182725|ref|YP_003926852.1| GTP-dependent nucleic acid-binding protein EngD [Helicobacter pylori PeCan4] gi|308064910|gb|ADO06802.1| GTP-dependent nucleic acid-binding protein EngD [Helicobacter pylori PeCan4] Length = 366 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 26/144 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAQSANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDE 261 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ A D+ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDDNIAHVN---DK 119 Query: 262 LSAYNSELRKKIEIVGLSQIDTVD 285 + N ++E++ L+ I T+D Sbjct: 120 IDPLNDIETIELELI-LADIATLD 142 >gi|242080845|ref|XP_002445191.1| hypothetical protein SORBIDRAFT_07g005700 [Sorghum bicolor] gi|241941541|gb|EES14686.1| hypothetical protein SORBIDRAFT_07g005700 [Sorghum bicolor] Length = 393 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF VT+ ++PF T+ PN V + F Sbjct: 26 IGIVGLPNVGKSTFFNIVTKLAIPAENFPFCTIEPNEARVNVPDERFDWLCKLYKPKSEV 85 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+I+ AH G G+G+ FL H + H++ A E+ Sbjct: 86 PAYLEVTDIAGLIRGAHAGDGLGNAFLSHIRAVDGIFHVLRAFED 130 >gi|153001808|ref|YP_001367489.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella baltica OS185] gi|160876541|ref|YP_001555857.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella baltica OS195] gi|217972297|ref|YP_002357048.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella baltica OS223] gi|304410284|ref|ZP_07391903.1| GTP-binding protein YchF [Shewanella baltica OS183] gi|307302005|ref|ZP_07581763.1| GTP-binding protein YchF [Shewanella baltica BA175] gi|151366426|gb|ABS09426.1| GTP-binding protein YchF [Shewanella baltica OS185] gi|160862063|gb|ABX50597.1| GTP-binding protein YchF [Shewanella baltica OS195] gi|217497432|gb|ACK45625.1| GTP-binding protein YchF [Shewanella baltica OS223] gi|304351693|gb|EFM16092.1| GTP-binding protein YchF [Shewanella baltica OS183] gi|306914043|gb|EFN44464.1| GTP-binding protein YchF [Shewanella baltica BA175] Length = 363 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVNPQRVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V +++ Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFDDD 110 >gi|91792180|ref|YP_561831.1| translation-associated GTPase [Shewanella denitrificans OS217] gi|91714182|gb|ABE54108.1| conserved hypothetical protein [Shewanella denitrificans OS217] Length = 363 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVNPQRVIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL + T + H+V E+ Sbjct: 66 TSMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFED 109 >gi|15530273|gb|AAH13925.1| OLA1 protein [Homo sapiens] gi|119631554|gb|EAX11149.1| GTP-binding protein PTD004, isoform CRA_a [Homo sapiens] Length = 278 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|281348302|gb|EFB23886.1| hypothetical protein PANDA_008995 [Ailuropoda melanoleuca] Length = 245 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 27 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 86 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 87 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 132 >gi|119505830|ref|ZP_01627896.1| translation-associated GTPase [marine gamma proteobacterium HTCC2080] gi|119458328|gb|EAW39437.1| translation-associated GTPase [marine gamma proteobacterium HTCC2080] Length = 364 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T A ++PF T+ PN G+V +E Sbjct: 6 GIVGLPNVGKSTLFNALTEAGIDAENFPFCTIEPNAGVVPIPDPRQHSIAALINPEREIA 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 66 ATMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDD 110 >gi|240850143|ref|YP_002971536.1| translation-associated GTPase [Bartonella grahamii as4aup] gi|240267266|gb|ACS50854.1| translation-associated GTPase [Bartonella grahamii as4aup] Length = 367 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 18/104 (17%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTATAQAANYPFCTIEPNTGEVAVPDLRMEKIASIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 DI G+++ A +G G+G++FL + ++H++ + Sbjct: 66 PTRINFVDIAGLVRGASKGEGLGNKFLANIREVDAIVHVLRCFQ 109 >gi|163867938|ref|YP_001609142.1| GTP-dependent nucleic acid-binding protein EngD [Bartonella tribocorum CIP 105476] gi|161017589|emb|CAK01147.1| GTP-binding protein [Bartonella tribocorum CIP 105476] Length = 367 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 18/104 (17%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTATAQAANYPFCTIEPNTGEVAVPDLRMEKIASIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 DI G+++ A +G G+G++FL + ++H++ + Sbjct: 66 PTRINFVDIAGLVRGASKGEGLGNKFLANIREVDAIVHVLRCFQ 109 >gi|332030224|gb|EGI70007.1| Developmentally-regulated GTP-binding protein 2 [Acromyrmex echinatior] Length = 363 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T + + A Y FTTL G+++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTLLSTLTATQSEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A QG G G + + ++L ++ A +++VQ Q + EL + L KK Sbjct: 122 AAQGKGRGRQVISVARTADLVLMMLDATKQDVQR--QLLEKELESVGIRLNKK 172 >gi|260467093|ref|ZP_05813272.1| GTP-binding protein YchF [Mesorhizobium opportunistum WSM2075] gi|259029105|gb|EEW30402.1| GTP-binding protein YchF [Mesorhizobium opportunistum WSM2075] Length = 367 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 GI+GLPN GKST ++TR A + A+YPF T+ PN G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTRTAAAQAANYPFCTIEPNTGEVAVPDPRLGKIAAIGKSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDD 111 >gi|33240682|ref|NP_875624.1| translation-associated GTPase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238210|gb|AAQ00277.1| Predicted GTPase, probable translation factor [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 363 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 19/109 (17%) Query: 162 IGIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST F A V A+ + A++PF T+ PN+G V KE Sbjct: 4 VGIVGLPNVGKSTLFNALVANAQAQAANFPFCTIEPNVGTVSVPDDRLKLLGALSDSKEL 63 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 + DI G++K A QG G+G++FL + ++H+V E ENV Sbjct: 64 VPTRIEFVDIAGLVKGASQGEGLGNKFLSNIREVDAIVHVVRCFEDENV 112 >gi|301769721|ref|XP_002920288.1| PREDICTED: obg-like ATPase 1-like, partial [Ailuropoda melanoleuca] Length = 242 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|297379770|gb|ADI34657.1| GTP-binding protein YchF [Helicobacter pylori v225d] Length = 366 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAESANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|312194588|ref|YP_004014649.1| GTP-binding protein YchF [Frankia sp. EuI1c] gi|311225924|gb|ADP78779.1| GTP-binding protein YchF [Frankia sp. EuI1c] Length = 358 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 21/107 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA---------- 211 IGI+GLPN GKST ++TR A+YPF T+ PN+G+V G + LA Sbjct: 5 IGIVGLPNVGKSTLFNALTRNDVVAANYPFATIEPNVGVV--GVPDSRLAELAKLYGDPR 62 Query: 212 ---------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+++ A +G G+G++FL + + + +V + Sbjct: 63 VVPATVSFVDIAGLVRGAAEGQGLGNKFLANIRESDAVCQVVRVFSD 109 >gi|207091772|ref|ZP_03239559.1| translation-associated GTPase [Helicobacter pylori HPKX_438_AG0C1] Length = 366 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAQSANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|188527584|ref|YP_001910271.1| GTP-dependent nucleic acid-binding protein EngD [Helicobacter pylori Shi470] gi|188143824|gb|ACD48241.1| translation-associated GTPase [Helicobacter pylori Shi470] Length = 366 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAESANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|108562973|ref|YP_627289.1| GTP-dependent nucleic acid-binding protein EngD [Helicobacter pylori HPAG1] gi|107836746|gb|ABF84615.1| GTP-binding protein [Helicobacter pylori HPAG1] Length = 366 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAQSANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|254474875|ref|ZP_05088261.1| GTP-binding protein YchF [Ruegeria sp. R11] gi|214029118|gb|EEB69953.1| GTP-binding protein YchF [Ruegeria sp. R11] Length = 365 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G V G K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTKTASAQAANFPFCTIEPNVGEVGVPDPRLDKLAAIAGSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIREVDAIAHVLRCFED 110 >gi|11496155|gb|AAF97355.1| Obg-like protein [Thermococcus zilligii] Length = 397 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 24/110 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV--------KE--------- 203 ++G++G PN GKSTF ++ T IA+YPFTT+ N+G+ KE Sbjct: 2 EVGVVGKPNVGKSTFFSAATLVDVDIANYPFTTIEANVGVTYAIADHPCKELGCRPNPQN 61 Query: 204 -GYKE------FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 YK+ + D+ G++ AH+G G+G++FL L+H++ A Sbjct: 62 YEYKDGTALIPVKMIDVAGLVPGAHEGRGLGNKFLDDLRMASALIHVIDA 111 >gi|74004626|ref|XP_850320.1| PREDICTED: similar to Putative GTP-binding protein PTD004 isoform 2 [Canis familiaris] Length = 398 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|308234260|ref|ZP_07664997.1| GTP-binding protein YchF [Atopobium vaginae DSM 15829] gi|328943811|ref|ZP_08241276.1| GTP-dependent nucleic acid-binding protein EngD [Atopobium vaginae DSM 15829] gi|327491780|gb|EGF23554.1| GTP-dependent nucleic acid-binding protein EngD [Atopobium vaginae DSM 15829] Length = 353 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 21/102 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++T+ A+YPF T+ PN+GIV+ Sbjct: 5 IGIVGLPNVGKSTLFTALTKQTGLAANYPFATIDPNVGIVQVPDTRLNQLAQIVHPAQIV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 EF+ DI G+++ A+ G G+G++FL + + + +V Sbjct: 65 PATVEFV--DIAGLVRGANNGEGLGNQFLANIRQCDAICEVV 104 >gi|326511136|dbj|BAJ87582.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 438 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 18/114 (15%) Query: 155 KLKLIADIGIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV------------ 201 K+ + GI+GLPN GKST F A V K + A++PF T+ PN G+V Sbjct: 66 KISMSLRAGIVGLPNVGKSTLFNAIVENGKAQAANFPFCTINPNTGVVAIPDPRLQVLSK 125 Query: 202 ----KEGYKEFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 K+ I L DI G++K A +G G+G++FL + +L +V E++ Sbjct: 126 LSKSKQTVPTSIELVDIAGLVKGASKGEGLGNQFLSNIREVDSILQVVRCFEDD 179 >gi|317012383|gb|ADU82991.1| GTP-dependent nucleic acid-binding protein EngD [Helicobacter pylori Lithuania75] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAQSANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|226365350|ref|YP_002783133.1| GTP-dependent nucleic acid-binding protein EngD [Rhodococcus opacus B4] gi|226243840|dbj|BAH54188.1| putative GTP-binding protein [Rhodococcus opacus B4] Length = 359 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY-KEFIL 210 +GI+GLPN GKST ++T A+YPF T+ PN+G+V+ E + E IL Sbjct: 5 LGIVGLPNVGKSTLFNALTNNDVLAANYPFATIEPNVGLVELPDPRLSKLAEIFGSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +GAG+G++FL + + +V ++ Sbjct: 65 PATVSFVDIAGIVKGASEGAGLGNKFLANIREADAICQVVRVFHDD 110 >gi|126175457|ref|YP_001051606.1| GTP-dependent nucleic acid-binding protein EngD [Shewanella baltica OS155] gi|125998662|gb|ABN62737.1| GTP-binding protein YchF [Shewanella baltica OS155] Length = 363 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVNPQRVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V +++ Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFDDD 110 >gi|307637254|gb|ADN79704.1| GTP-dependent nucleic acid-binding protein [Helicobacter pylori 908] gi|325995846|gb|ADZ51251.1| GTP-binding and nucleic acid-binding protein [Helicobacter pylori 2018] gi|325997440|gb|ADZ49648.1| GTP-dependent nucleic acid-binding protein [Helicobacter pylori 2017] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYK-----------EFI 209 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV K E I Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAQSANYPFCTIEPNKAIVNVPDKRLDALAQIVKPERI 64 Query: 210 L------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 L DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFVDIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|301090916|ref|XP_002895654.1| GTP-dependent nucleic acid-binding protein engD, putative [Phytophthora infestans T30-4] gi|262097103|gb|EEY55155.1| GTP-dependent nucleic acid-binding protein engD, putative [Phytophthora infestans T30-4] Length = 383 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+G+PN GKST ++T+ + + A+YPF T+ PN+ V Sbjct: 21 VGIVGMPNVGKSTLFNALTKTEVAQAANYPFCTIDPNVARVAVPDERVRHLSEVEKSKRV 80 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 E EF+ DI G+++ A G G+G++FL + + V+ H+V E+ Sbjct: 81 IETQLEFV--DIAGLVRGASNGEGLGNKFLDNIRQVAVVAHVVRCFEDT 127 >gi|260772284|ref|ZP_05881200.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio metschnikovii CIP 69.14] gi|260611423|gb|EEX36626.1| GTP-binding and nucleic acid-binding protein YchF [Vibrio metschnikovii CIP 69.14] Length = 363 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 22/109 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTNAGIEAANFPFCTIEPNTGVVPVPDLRLDALAKIVNPQRILP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENENI 112 >gi|114331141|ref|YP_747363.1| translation-associated GTPase [Nitrosomonas eutropha C91] gi|114308155|gb|ABI59398.1| GTP-binding protein YchF [Nitrosomonas eutropha C91] Length = 363 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VKE 203 GI+GLPN GKST ++T+A +YPF T+ PN+GI V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDSRLAELSKIVNPQRVQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL + T ++++V ++ Sbjct: 66 AIVEFV--DIAGLVAGASRGEGLGNQFLANIRETDAIVNVVRCFDD 109 >gi|308061900|gb|ADO03788.1| GTP-dependent nucleic acid-binding protein EngD [Helicobacter pylori Cuz20] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAESANYPFCTIEPNKAIVNVPDRRLDALAQIIKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|307197879|gb|EFN78978.1| Developmentally-regulated GTP-binding protein 2 [Harpegnathos saltator] Length = 363 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T + + A Y FTTL G+++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTLLSTLTHTESEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A QG G G + + ++L ++ A +++VQ Q + EL + L KK Sbjct: 122 AAQGKGRGRQVIAVARTADLVLMMLDATKQDVQR--QLLEKELESVGIRLNKK 172 >gi|111022842|ref|YP_705814.1| translation-associated GTPase [Rhodococcus jostii RHA1] gi|110822372|gb|ABG97656.1| probable GTP binding protein [Rhodococcus jostii RHA1] Length = 359 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 +GI+GLPN GKST ++T A+YPF T+ PN+G+V+ G + + Sbjct: 5 LGIVGLPNVGKSTLFNALTNNDVLAANYPFATIEPNVGLVELPDPRLSELARIFGSERIL 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI GI+K A +GAG+G++FL + + +V ++ Sbjct: 65 PATVSFVDIAGIVKGASEGAGLGNKFLANIREADAICQVVRVFNDD 110 >gi|26987455|ref|NP_742880.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas putida KT2440] gi|24982118|gb|AAN66344.1|AE016263_1 GTP-binding protein, putative [Pseudomonas putida KT2440] gi|313497085|gb|ADR58451.1| Translation-associated GTPase [Pseudomonas putida BIRD-1] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 30/156 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T++ ++PF T+ PN GIV E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLAALAEIVKPNRI 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E ENV + Sbjct: 64 LPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV----------I 113 Query: 263 SAYNS-ELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 NS + ++ IEI+ L I D D+ ++ ++A Sbjct: 114 HVSNSVDPKRDIEIIDLELI-FADLDSCEKQLQKVA 148 >gi|292572227|gb|ADE30142.1| GTP-binding protein YchF [Rickettsia prowazekii Rp22] Length = 365 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 22/108 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKST ++T ++ A+YPF T+ PN V Sbjct: 5 LGIVGLPNVGKSTLFNALTASQIADAANYPFCTIEPNSSKVLVPDERLQRLVSLVGSNKM 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y EF+ DI G++K A +G G+G++FL H +LH++ E+ Sbjct: 65 IPSYIEFV--DIAGLVKGASKGDGLGNKFLSHIREVDAILHVLRCFED 110 >gi|212223814|ref|YP_002307050.1| translation-associated GTPase [Thermococcus onnurineus NA1] gi|212008771|gb|ACJ16153.1| Hypothetical GTPase [Thermococcus onnurineus NA1] Length = 397 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 24/108 (22%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV--------KE--------- 203 +IG++G PN GKSTF ++ T +IA+YPFTT+ N+G+ KE Sbjct: 2 EIGVVGKPNVGKSTFFSAATLVDVQIANYPFTTIDANVGVTYAVAEHPCKELGCKPNPQN 61 Query: 204 -GYKEFI------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 YK+ + + D+ G++ AH+G G+G++FL L+H+V Sbjct: 62 YEYKDGLALIPIKMIDVAGLVPGAHEGRGLGNKFLDDLRMASALIHVV 109 >gi|206602646|gb|EDZ39127.1| GTP-binding protein [Leptospirillum sp. Group II '5-way CG'] Length = 364 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------------KEGYK 206 GI+GLPN GKST ++T ++A++PF T+ P++G+V K+ Sbjct: 6 GIVGLPNVGKSTLFNALTSGSAQVANFPFCTIDPHVGVVPVPDKRLQRLEDLYHPKKTTP 65 Query: 207 EFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F+ + DI G+++ A G G+G++FL H ++ +V ++ Sbjct: 66 TFVEIVDIAGLVRGASSGEGLGNQFLGHIRSVDAIIQVVRVFDD 109 >gi|208434489|ref|YP_002266155.1| GTP-binding protein [Helicobacter pylori G27] gi|208432418|gb|ACI27289.1| GTP-binding protein [Helicobacter pylori G27] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAQSANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|167031778|ref|YP_001667009.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas putida GB-1] gi|166858266|gb|ABY96673.1| GTP-binding protein YchF [Pseudomonas putida GB-1] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 30/156 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T++ ++PF T+ PN GIV E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLAALAEIVKPNRI 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E ENV + Sbjct: 64 LPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV----------I 113 Query: 263 SAYNS-ELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 NS + ++ IEI+ L I D D+ ++ ++A Sbjct: 114 HVSNSVDPKRDIEIIDLELI-FADLDSCEKQLQKVA 148 >gi|126465750|ref|YP_001040859.1| translation-associated GTPase [Staphylothermus marinus F1] gi|126014573|gb|ABN69951.1| GTPase of unknown function-like protein [Staphylothermus marinus F1] Length = 409 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 25/110 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI---------VKEGYKE----- 207 IGIIG N GKST A++T A IA++PFTT+ PN+G+ V+ G ++ Sbjct: 8 IGIIGKTNVGKSTLFAALTLAPVAIANHPFTTIKPNIGVGYVRKKCVHVELGLEKCDPRT 67 Query: 208 --------FI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 FI + D+ G+I A QG G+G++F+ + +L+H+V A Sbjct: 68 GMCIKGNRFIPVKIMDVAGLIPGASQGRGLGNKFMDDLRQADILIHVVDA 117 >gi|227830366|ref|YP_002832146.1| translation-associated GTPase [Sulfolobus islandicus L.S.2.15] gi|229582064|ref|YP_002840463.1| translation-associated GTPase [Sulfolobus islandicus Y.N.15.51] gi|284997872|ref|YP_003419639.1| GTPase of unknown function-like protein [Sulfolobus islandicus L.D.8.5] gi|227456814|gb|ACP35501.1| GTPase of unknown function domain protein [Sulfolobus islandicus L.S.2.15] gi|228012780|gb|ACP48541.1| GTPase of unknown function domain protein [Sulfolobus islandicus Y.N.15.51] gi|284445767|gb|ADB87269.1| GTPase of unknown function-like protein [Sulfolobus islandicus L.D.8.5] Length = 401 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI----VKEGYKEF--------- 208 IGIIG N GKSTF A+ T +IA+ PF T+ PN GI V+ + EF Sbjct: 4 IGIIGKTNVGKSTFFAAATLKDVEIANRPFVTINPNEGIGYVRVRCVHTEFNVKCNPKNS 63 Query: 209 -----------ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 L D+ G+I AH+G G+G++FL + L+H++ A Sbjct: 64 ICIDDYRFIPVKLIDVAGLIPGAHEGRGLGNKFLDDLRQADALIHVIDA 112 >gi|148253298|ref|YP_001237883.1| GTP-dependent nucleic acid-binding protein EngD [Bradyrhizobium sp. BTAi1] gi|146405471|gb|ABQ33977.1| Putative GTP-dependent nucleic acid-binding protein (engD) [Bradyrhizobium sp. BTAi1] Length = 365 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLG--------------IVKEGY-- 205 GI+GLPN GKST ++T A + A+YPF T+ PN+G I K G Sbjct: 6 GIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGEVAVPDPRLEKLAAIAKSGQII 65 Query: 206 -KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + + H+V E++ Sbjct: 66 PTRLTFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVVRCFEDS 111 >gi|315586746|gb|ADU41127.1| GTP-binding protein YchF [Helicobacter pylori 35A] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAQSANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERV 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|121701273|ref|XP_001268901.1| GTP-binding protein [Aspergillus clavatus NRRL 1] gi|119397044|gb|EAW07475.1| GTP-binding protein [Aspergillus clavatus NRRL 1] Length = 414 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L S+T A K+ ++PFTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNSLTDASSKVGNFPFTTIDPQRAIGYLQIECACQRYNVADKCKPN 66 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G EG + L D+ G++ AHQG G+G++FL L+H+V Sbjct: 67 YGSCVEGRRSVPIELLDVAGLVPGAHQGRGLGNKFLDDLRHADALIHVV 115 >gi|66801213|ref|XP_629532.1| hypothetical protein DDB_G0292626 [Dictyostelium discoideum AX4] gi|60462919|gb|EAL61116.1| hypothetical protein DDB_G0292626 [Dictyostelium discoideum AX4] Length = 409 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLG--IVKEGYKEFI--------- 209 I I+GLPN GKSTF ++T + +A ++PF T+ PN+G V + ++I Sbjct: 47 ISIVGLPNIGKSTFFNALTSSNAAMAANFPFCTIDPNIGKVFVPDERLDYISDLLKTKSK 106 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 D+ G+IK A G G+G++FL + +T ++ H+V E+ Sbjct: 107 IGVQLEFVDVAGLIKGAADGEGLGNKFLGNIRQTSLICHLVRCFED 152 >gi|308184352|ref|YP_003928485.1| GTP-dependent nucleic acid-binding protein EngD [Helicobacter pylori SJM180] gi|308060272|gb|ADO02168.1| GTP-dependent nucleic acid-binding protein EngD [Helicobacter pylori SJM180] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAQSANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|330961719|gb|EGH61979.1| GTP-binding protein YchF [Pseudomonas syringae pv. maculicola str. ES4326] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 34/158 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNPKRI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV--------- 112 Query: 261 ELSAYNS-ELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 + NS + ++ IEI+ L I D D+ ++ ++A Sbjct: 113 -IHVSNSVDPKRDIEIIDLELI-FADLDSCEKQLQKVA 148 >gi|229579184|ref|YP_002837582.1| translation-associated GTPase [Sulfolobus islandicus Y.G.57.14] gi|228009898|gb|ACP45660.1| GTPase of unknown function domain protein [Sulfolobus islandicus Y.G.57.14] Length = 401 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI----VKEGYKEF--------- 208 IGIIG N GKSTF A+ T +IA+ PF T+ PN GI V+ + EF Sbjct: 4 IGIIGKTNVGKSTFFAAATLKDVEIANRPFVTINPNEGIGYVRVRCVHTEFNVKCNPKNS 63 Query: 209 -----------ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 L D+ G+I AH+G G+G++FL + L+H++ A Sbjct: 64 ICIDDYRFIPVKLIDVAGLIPGAHEGRGLGNKFLDDLRQADALIHVIDA 112 >gi|120555280|ref|YP_959631.1| GTP-dependent nucleic acid-binding protein EngD [Marinobacter aquaeolei VT8] gi|120325129|gb|ABM19444.1| GTP-binding protein YchF [Marinobacter aquaeolei VT8] Length = 363 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 31/147 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T+ PN G+V Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAGIGAENFPFCTIEPNAGVVAMPDPRLTKLAEIVKPERV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-NVQAAYQCI-- 258 EF+ DI G++ A +G G+G++FL + +T + H+V E+ NV + Sbjct: 64 VPTTMEFV--DIAGLVAGASKGEGLGNQFLANIRQTDAIAHVVRCFEDGNVIHVANKVDP 121 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTVD 285 ++ N+EL L+ +DTV+ Sbjct: 122 ASDIEVINTEL-------ALADLDTVE 141 >gi|320589331|gb|EFX01793.1| GTP-binding protein, hsr1-related [Grosmannia clavigera kw1407] Length = 377 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +G +GLPN GKS+ +T +YPF T+ PN ++ DI G+IK A Sbjct: 25 MGCVGLPNVGKSSLFNLLTEQSAAAENYPFCTIEPNEARCAVPDARYV-TDIAGLIKGAS 83 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEEN 250 QG G+G+ FL H + + HIV A + + Sbjct: 84 QGEGLGNSFLSHIQAVDGMFHIVRAFDND 112 >gi|229493951|ref|ZP_04387723.1| GTP-binding protein YchF [Rhodococcus erythropolis SK121] gi|229319228|gb|EEN85077.1| GTP-binding protein YchF [Rhodococcus erythropolis SK121] Length = 359 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY-KEFIL 210 +GI+GLPN GKST ++T A+YPF T+ PN+G+V+ E + E IL Sbjct: 5 LGIVGLPNVGKSTLFNALTNNDVLAANYPFATIEPNVGLVELPDPRLQKLAEIFGSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +GAG+G++FL + + +V ++ Sbjct: 65 PATVSFVDIAGIVKGASEGAGLGNKFLANIREADAICQVVRVFADD 110 >gi|313126358|ref|YP_004036628.1| hypothetical protein Hbor_16130 [Halogeometricum borinquense DSM 11551] gi|312292723|gb|ADQ67183.1| GTP-binding conserved hypothetical protein TIGR00650 [Halogeometricum borinquense DSM 11551] Length = 391 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 20/105 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI------------------VKE 203 I + G PNAGKSTF + T A + +YPFTT+ PN G+ ++ Sbjct: 4 IALAGKPNAGKSTFYKAATMADVDVGNYPFTTIDPNRGVSYARTRCPCLDRDERCGNCED 63 Query: 204 G--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G Y L D+ G++ AH+G G+G++FL V+L +V A Sbjct: 64 GVRYVGVELLDVAGLVPGAHEGRGLGNQFLDALTNADVILAVVDA 108 >gi|217032378|ref|ZP_03437873.1| hypothetical protein HPB128_25g26 [Helicobacter pylori B128] gi|298736260|ref|YP_003728786.1| translation-associated GTPase Gtp1 [Helicobacter pylori B8] gi|216945945|gb|EEC24561.1| hypothetical protein HPB128_25g26 [Helicobacter pylori B128] gi|298355450|emb|CBI66322.1| translation-associated GTPase Gtp1 [Helicobacter pylori B8] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAQSANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|99031619|pdb|1WXQ|A Chain A, Crystal Structure Of Gtp Binding Protein From Pyrococcus Horikoshii Ot3 Length = 397 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 24/110 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------------KEG 204 +IG++G PN GKSTF ++ T +IA+YPFTT+ N+G+ + Sbjct: 2 EIGVVGKPNVGKSTFFSAATLVDVEIANYPFTTIEANVGVTYAITDHPCKELGCSPNPQN 61 Query: 205 YK--------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 Y+ D+ G++ AH+G G+G++FL L+H+V A Sbjct: 62 YEYRNGLALIPVKXVDVAGLVPGAHEGRGLGNKFLDDLRXASALIHVVDA 111 >gi|30249777|ref|NP_841847.1| translation-associated GTPase [Nitrosomonas europaea ATCC 19718] gi|30180814|emb|CAD85734.1| GTP1/OBG family:Conserved hypothetical protein 92 [Nitrosomonas europaea ATCC 19718] Length = 363 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VKE 203 GI+GLPN GKST ++T+A +YPF T+ PN+GI V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDSRLTELSRIVNPQRVQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL + T ++++V ++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDD 109 >gi|300706572|ref|XP_002995541.1| hypothetical protein NCER_101530 [Nosema ceranae BRL01] gi|239604688|gb|EEQ81870.1| hypothetical protein NCER_101530 [Nosema ceranae BRL01] Length = 381 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 28/135 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--------------------IV 201 +GI+GLPN GKST +T+ +YPF T+ P+ G +V Sbjct: 29 VGIVGLPNTGKSTLFNFLTKNSVPAENYPFCTIDPSHGKVEIDDVRCDNLVNICKPNKVV 88 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQC 257 K + DI G++K A +G G+G+ FL H + H+V E+ +V+ + Sbjct: 89 KACLN---VTDIAGLVKGASEGFGLGNCFLSHIRSVDAIFHVVRCFEDSEILHVEDSVDP 145 Query: 258 ILDELSAYNSELRKK 272 I D + N ELRKK Sbjct: 146 IRD-IKVVNDELRKK 159 >gi|227827669|ref|YP_002829449.1| translation-associated GTPase [Sulfolobus islandicus M.14.25] gi|229584873|ref|YP_002843375.1| translation-associated GTPase [Sulfolobus islandicus M.16.27] gi|238619840|ref|YP_002914666.1| translation-associated GTPase [Sulfolobus islandicus M.16.4] gi|227459465|gb|ACP38151.1| GTPase of unknown function domain protein [Sulfolobus islandicus M.14.25] gi|228019923|gb|ACP55330.1| GTPase of unknown function domain protein [Sulfolobus islandicus M.16.27] gi|238380910|gb|ACR41998.1| GTPase of unknown function domain protein [Sulfolobus islandicus M.16.4] gi|323474727|gb|ADX85333.1| GTPase of unknown function domain protein [Sulfolobus islandicus REY15A] gi|323477455|gb|ADX82693.1| GTPase of unknown function [Sulfolobus islandicus HVE10/4] Length = 401 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI----VKEGYKEF--------- 208 IGIIG N GKSTF A+ T +IA+ PF T+ PN GI V+ + EF Sbjct: 4 IGIIGKTNVGKSTFFAAATLKDVEIANRPFVTINPNEGIGYVRVRCVHTEFNVKCNPKNS 63 Query: 209 -----------ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 L D+ G+I AH+G G+G++FL + L+H++ A Sbjct: 64 ICIDDYRFIPVKLIDVAGLIPGAHEGRGLGNKFLDDLRQADALIHVIDA 112 >gi|226307711|ref|YP_002767671.1| GTP-binding protein [Rhodococcus erythropolis PR4] gi|226186828|dbj|BAH34932.1| probable GTP-binding protein [Rhodococcus erythropolis PR4] Length = 359 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY-KEFIL 210 +GI+GLPN GKST ++T A+YPF T+ PN+G+V+ E + E IL Sbjct: 5 LGIVGLPNVGKSTLFNALTNNDVLAANYPFATIEPNVGLVELPDPRLQKLAEIFGSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +GAG+G++FL + + +V ++ Sbjct: 65 PATVSFVDIAGIVKGASEGAGLGNKFLANIREADAICQVVRVFADD 110 >gi|28868316|ref|NP_790935.1| GTP-binding protein YchF [Pseudomonas syringae pv. tomato str. DC3000] gi|213967232|ref|ZP_03395381.1| GTP-binding protein YchF [Pseudomonas syringae pv. tomato T1] gi|301381032|ref|ZP_07229450.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas syringae pv. tomato Max13] gi|302059359|ref|ZP_07250900.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas syringae pv. tomato K40] gi|302134876|ref|ZP_07260866.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851553|gb|AAO54630.1| GTP-binding protein YchF [Pseudomonas syringae pv. tomato str. DC3000] gi|213928074|gb|EEB61620.1| GTP-binding protein YchF [Pseudomonas syringae pv. tomato T1] gi|331018130|gb|EGH98186.1| GTP-binding protein YchF [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 33/142 (23%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNTGIVPMPDPRLAALAAIVNPKRI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV--------- 112 Query: 261 ELSAYNS-ELRKKIEIVGLSQI 281 + NS + ++ IEI+ L I Sbjct: 113 -IHVSNSVDPKRDIEIIDLELI 133 >gi|332673635|gb|AEE70452.1| GTP-binding protein YchF [Helicobacter pylori 83] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAESANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERV 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|330873315|gb|EGH07464.1| GTP-binding protein YchF [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330967424|gb|EGH67684.1| GTP-binding protein YchF [Pseudomonas syringae pv. actinidiae str. M302091] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 33/142 (23%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNTGIVPMPDPRLAALAAIVNPKRI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV--------- 112 Query: 261 ELSAYNS-ELRKKIEIVGLSQI 281 + NS + ++ IEI+ L I Sbjct: 113 -IHVSNSVDPKRDIEIIDLELI 133 >gi|15645194|ref|NP_207364.1| GTP-dependent nucleic acid-binding protein EngD [Helicobacter pylori 26695] gi|2313689|gb|AAD07637.1| GTP-binding protein (gtp1) [Helicobacter pylori 26695] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAQSANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|255263027|ref|ZP_05342369.1| GTP-binding protein YchF [Thalassiobium sp. R2A62] gi|255105362|gb|EET48036.1| GTP-binding protein YchF [Thalassiobium sp. R2A62] Length = 365 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G V K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGEVAVPDARLDKLAAIASSKQV 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A QG G+G++FL + + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASQGEGLGNQFLANIREVDAIAHVLRCFED 110 >gi|254780226|ref|YP_003064639.1| translation-associated GTPase [Candidatus Liberibacter asiaticus str. psy62] gi|254039903|gb|ACT56699.1| translation-associated GTPase [Candidatus Liberibacter asiaticus str. psy62] Length = 367 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 19/108 (17%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GIIGLPN GKST ++TR A + A+YPF T+ PN G V K+ + Sbjct: 6 GIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLV 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI G+++ A +G G+G++FL H ++H++ +EN+ Sbjct: 66 PTRMSFVDIAGLVRGASKGEGLGNQFLAHIREVDAIIHVLRCFKDENI 113 >gi|162146759|ref|YP_001601218.1| GTP-dependent nucleic acid-binding protein EngD [Gluconacetobacter diazotrophicus PAl 5] gi|209543254|ref|YP_002275483.1| GTP-dependent nucleic acid-binding protein EngD [Gluconacetobacter diazotrophicus PAl 5] gi|161785334|emb|CAP54880.1| GTP-dependent nucleic acid-binding protein engD [Gluconacetobacter diazotrophicus PAl 5] gi|209530931|gb|ACI50868.1| GTP-binding protein YchF [Gluconacetobacter diazotrophicus PAl 5] Length = 364 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 18/108 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVKE-----------GYKEF 208 + GI+GLPN GKST ++T A + A+YPF T+ PN+G V G + Sbjct: 4 NCGIVGLPNVGKSTLFNALTETASAQAANYPFCTIEPNVGRVAVPDPRLQALAAIGKSQK 63 Query: 209 IL------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 IL DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 64 ILPTSLEFVDIAGLVRGASRGEGLGNQFLANIREVDAIIHVLRCFEDD 111 >gi|15604454|ref|NP_220972.1| GTP-dependent nucleic acid-binding protein EngD [Rickettsia prowazekii str. Madrid E] gi|3861148|emb|CAA15048.1| unknown [Rickettsia prowazekii] Length = 365 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 22/108 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKST ++T ++ A+YPF T+ PN V Sbjct: 5 LGIVGLPNVGKSTLFNALTASQIADAANYPFCTIEPNSSKVLVPDERLQRLVSLVGSNKM 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y EF+ DI G++K A +G G+G++FL H +LH++ E+ Sbjct: 65 IPSYIEFV--DIAGLVKGASKGDGLGNKFLSHIREVDAILHVLRCFED 110 >gi|317009454|gb|ADU80034.1| GTP-dependent nucleic acid-binding protein EngD [Helicobacter pylori India7] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAESANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|313107335|ref|ZP_07793530.1| putative GTP-binding protein [Pseudomonas aeruginosa 39016] gi|310880032|gb|EFQ38626.1| putative GTP-binding protein [Pseudomonas aeruginosa 39016] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 28/155 (18%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T++ ++PF T+ PN GIV E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLNALAEIVKPERV 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 DI G++ A +G G+G++FL + T + H+V E++ + + Sbjct: 64 LPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDD---------NVIH 114 Query: 264 AYNS-ELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 NS + ++ IEI+ L I D D+ ++ ++A Sbjct: 115 VSNSVDPKRDIEIIDLELI-FADLDSCEKQLQKVA 148 >gi|269217159|ref|ZP_06161013.1| GTP-binding protein YchF [Slackia exigua ATCC 700122] gi|269129296|gb|EEZ60381.1| GTP-binding protein YchF [Slackia exigua ATCC 700122] Length = 354 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 21/102 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKS+ ++T+ A+YPF T+ PN+GIV Sbjct: 5 IGIVGLPNVGKSSLFTALTKKGGLAANYPFATIDPNVGIVAVPDARLDALAAIDHPAKIV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 EF+ DI G++ A QG G+G++FL + T + +V Sbjct: 65 PATVEFV--DIAGLVAGASQGEGLGNKFLANIRETDAICEVV 104 >gi|254779439|ref|YP_003057544.1| GTP-dependent nucleic acid-binding protein EngD [Helicobacter pylori B38] gi|254001350|emb|CAX29335.1| GTP-binding protein [Helicobacter pylori B38] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAQSANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|241762453|ref|ZP_04760530.1| GTP-binding protein YchF [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753465|ref|YP_003226358.1| GTP-dependent nucleic acid-binding protein EngD [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|241372955|gb|EER62622.1| GTP-binding protein YchF [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552828|gb|ACV75774.1| GTP-binding protein YchF [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIV-----------------KEG 204 GI+GLPN GKST ++T A + A+YPF T+ PN+G V + Sbjct: 6 GIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGQVAVPDPRLNQIAEIANSQRVV 65 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+++ A +G G+G++FL H ++H++ E++ Sbjct: 66 ETQLGFVDIAGLVRGASKGEGLGNQFLGHIREVDAIVHVLRCFEDD 111 >gi|217033514|ref|ZP_03438943.1| hypothetical protein HP9810_905g33 [Helicobacter pylori 98-10] gi|216944039|gb|EEC23470.1| hypothetical protein HP9810_905g33 [Helicobacter pylori 98-10] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAESANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|210134770|ref|YP_002301209.1| GTP-dependent nucleic acid-binding protein EngD [Helicobacter pylori P12] gi|210132738|gb|ACJ07729.1| GTP-binding protein [Helicobacter pylori P12] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAQSANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|49086120|gb|AAT51329.1| PA4673 [synthetic construct] Length = 367 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 28/155 (18%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T++ ++PF T+ PN GIV E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLNALAEIVKPEHV 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 DI G++ A +G G+G++FL + T + H+V E++ + + Sbjct: 64 LPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDD---------NVIH 114 Query: 264 AYNS-ELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 NS + ++ IEI+ L I D D+ ++ ++A Sbjct: 115 VSNSVDPKRDIEIIDLELI-FADLDSCEKQLQKVA 148 >gi|308063641|gb|ADO05528.1| GTP-dependent nucleic acid-binding protein EngD [Helicobacter pylori Sat464] Length = 366 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAESANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|146342829|ref|YP_001207877.1| GTP-dependent nucleic acid-binding protein EngD [Bradyrhizobium sp. ORS278] gi|146195635|emb|CAL79662.1| Putative GTP-dependent nucleic acid-binding protein (engD) [Bradyrhizobium sp. ORS278] Length = 365 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLG--------------IVKEGY-- 205 GI+GLPN GKST ++T A + A+YPF T+ PN+G I K G Sbjct: 6 GIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGEVAVPDPRLEKLAAIAKSGQII 65 Query: 206 -KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + + H+V E++ Sbjct: 66 PTRLTFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVVRCFEDS 111 >gi|66540013|ref|XP_624466.1| PREDICTED: developmentally-regulated GTP-binding protein 2-like [Apis mellifera] Length = 363 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T + + A Y FTTL G+++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTLLSTLTHTESEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A QG G G + + ++L ++ A +++VQ Q + EL + L KK Sbjct: 122 AAQGKGRGRQVIAVARTADLVLMMLDATKQDVQR--QLLEKELESVGIRLNKK 172 >gi|317177598|dbj|BAJ55387.1| translation-associated GTPase [Helicobacter pylori F16] Length = 366 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAESANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERV 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|317010788|gb|ADU84535.1| GTP-dependent nucleic acid-binding protein EngD [Helicobacter pylori SouthAfrica7] Length = 366 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYK-----------EFI 209 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV K E I Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAESANYPFCTIEPNKAIVNVPDKRLNALAQIVKPERI 64 Query: 210 L------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 L DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFVDIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|296391494|ref|ZP_06880969.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas aeruginosa PAb1] Length = 366 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 28/155 (18%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T++ ++PF T+ PN GIV E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLNALAEIVKPERV 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 DI G++ A +G G+G++FL + T + H+V E++ + + Sbjct: 64 LPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDD---------NVIH 114 Query: 264 AYNS-ELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 NS + ++ IEI+ L I D D+ ++ ++A Sbjct: 115 VSNSVDPKRDIEIIDLELI-FADLDSCEKQLQKVA 148 >gi|109947942|ref|YP_665170.1| GTP-dependent nucleic acid-binding protein EngD [Helicobacter acinonychis str. Sheeba] gi|109715163|emb|CAK00171.1| GTP-binding protein [Helicobacter acinonychis str. Sheeba] Length = 366 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 18/107 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYK-----------EFI 209 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV K E I Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAESANYPFCTIEPNKAIVNVPDKRLGALAQIVKPERI 64 Query: 210 L------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 L DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFVDIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|56552808|ref|YP_163647.1| GTP-dependent nucleic acid-binding protein EngD [Zymomonas mobilis subsp. mobilis ZM4] gi|56544382|gb|AAV90536.1| GTP-binding protein YchF [Zymomonas mobilis subsp. mobilis ZM4] Length = 366 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIV-----------------KEG 204 GI+GLPN GKST ++T A + A+YPF T+ PN+G V + Sbjct: 6 GIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGQVAVPDPRLNQIAEIANSQRVV 65 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+++ A +G G+G++FL H ++H++ E++ Sbjct: 66 ETQLGFVDIAGLVRGASKGEGLGNQFLGHIREVDAIVHVLRCFEDD 111 >gi|15599868|ref|NP_253362.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas aeruginosa PAO1] gi|107099660|ref|ZP_01363578.1| hypothetical protein PaerPA_01000678 [Pseudomonas aeruginosa PACS2] gi|116052818|ref|YP_793135.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas aeruginosa UCBPP-PA14] gi|218893770|ref|YP_002442639.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas aeruginosa LESB58] gi|254238587|ref|ZP_04931910.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|9950929|gb|AAG08060.1|AE004881_3 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|115588039|gb|ABJ14054.1| putative GTP-binding protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126170518|gb|EAZ56029.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|218773998|emb|CAW29813.1| putative GTP-binding protein [Pseudomonas aeruginosa LESB58] Length = 366 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 28/155 (18%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T++ ++PF T+ PN GIV E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLNALAEIVKPERV 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 DI G++ A +G G+G++FL + T + H+V E++ + + Sbjct: 64 LPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDD---------NVIH 114 Query: 264 AYNS-ELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 NS + ++ IEI+ L I D D+ ++ ++A Sbjct: 115 VSNSVDPKRDIEIIDLELI-FADLDSCEKQLQKVA 148 >gi|317181884|dbj|BAJ59668.1| translation-associated GTPase [Helicobacter pylori F57] Length = 366 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAESANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERV 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|312958842|ref|ZP_07773361.1| GTP-binding protein, HSR1-like protein [Pseudomonas fluorescens WH6] gi|311286612|gb|EFQ65174.1| GTP-binding protein, HSR1-like protein [Pseudomonas fluorescens WH6] Length = 366 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 34/158 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVNPKRI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV--------- 112 Query: 261 ELSAYNS-ELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 + NS + ++ IEI+ L I D D+ ++ ++A Sbjct: 113 -IHVSNSVDPKRDIEIIDLELI-FADLDSCEKQLQKVA 148 >gi|261839602|gb|ACX99367.1| translation-associated GTPase [Helicobacter pylori 52] Length = 366 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAESANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|291614808|ref|YP_003524965.1| GTP-binding protein YchF [Sideroxydans lithotrophicus ES-1] gi|291584920|gb|ADE12578.1| GTP-binding protein YchF [Sideroxydans lithotrophicus ES-1] Length = 363 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------KE 203 GI+GLPN GKST ++T+A +YPF T+ PN+GIV + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRMDELAKIVKPQRMQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL + T ++++V ++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDD 109 >gi|222479212|ref|YP_002565449.1| GTPase of unknown function domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222452114|gb|ACM56379.1| GTPase of unknown function domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 395 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 22/107 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------- 201 + + G PNAGKSTF + T A +A+YPFTT+ N G+ Sbjct: 4 VALAGKPNAGKSTFYTAATMADVDVANYPFTTIDANRGVTHVRTECPCLDRDERCGNENC 63 Query: 202 KEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 ++G Y L D+ G++ AH+G G+G++FL V+L++V A Sbjct: 64 RDGKRYVPVELLDVAGLVPGAHEGKGLGNQFLDELTNADVVLNVVDA 110 >gi|124514471|gb|EAY55984.1| GTP binding protein [Leptospirillum rubarum] Length = 364 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------------KEGYK 206 GI+GLPN GKST ++T ++A++PF T+ P++G+V K+ Sbjct: 6 GIVGLPNVGKSTLFNALTSGSAQVANFPFCTIDPHVGVVPVPDKRLQRLEDLYHPKKTTP 65 Query: 207 EFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F+ + DI G+++ A G G+G++FL H ++ +V ++ Sbjct: 66 TFVEIVDIAGLVRGASSGEGLGNQFLGHIRSVDAIIQVVRVFDD 109 >gi|297608116|ref|NP_001061206.2| Os08g0199300 [Oryza sativa Japonica Group] gi|38637314|dbj|BAD03576.1| putative GTP-binding protein [Oryza sativa Japonica Group] gi|215692813|dbj|BAG88257.1| unnamed protein product [Oryza sativa Japonica Group] gi|215704376|dbj|BAG93810.1| unnamed protein product [Oryza sativa Japonica Group] gi|222640074|gb|EEE68206.1| hypothetical protein OsJ_26368 [Oryza sativa Japonica Group] gi|255678220|dbj|BAF23120.2| Os08g0199300 [Oryza sativa Japonica Group] Length = 394 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 22/145 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF VT+ ++PF T+ PN V + F Sbjct: 27 IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEV 86 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 + DI G+++ AH G G+G+ FL H + H++ A E+ +D + Sbjct: 87 SAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPVRD 146 Query: 262 LSAYNSELR-KKIEIVGLSQIDTVD 285 L ELR K IE V ++ID ++ Sbjct: 147 LETIGEELRLKDIEFVQ-NKIDDLE 170 >gi|213405535|ref|XP_002173539.1| GTP-binding protein [Schizosaccharomyces japonicus yFS275] gi|212001586|gb|EEB07246.1| GTP-binding protein [Schizosaccharomyces japonicus yFS275] Length = 364 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 51/87 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + IG P+ GKST L S+T+ K ++A Y FTTL G+++ E + D+PGII+ Sbjct: 63 ARVAFIGFPSVGKSTLLTSITKTKSEVASYEFTTLTAIPGVLEYDGAEIQVLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 A QG G G + + + ++L ++ A Sbjct: 123 AAQGKGRGRQVVSVAKTADLILMVLDA 149 >gi|15611583|ref|NP_223234.1| GTP-dependent nucleic acid-binding protein EngD [Helicobacter pylori J99] gi|4155073|gb|AAD06109.1| putative [Helicobacter pylori J99] Length = 366 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAQSANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|109898886|ref|YP_662141.1| translation-associated GTPase [Pseudoalteromonas atlantica T6c] gi|109701167|gb|ABG41087.1| GTP-binding protein YchF [Pseudoalteromonas atlantica T6c] Length = 363 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDKLAAIVNPKRILP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+++ A +G G+G++FL + T + H+V + + Sbjct: 66 TTMEFV--DIAGLVEGASKGEGLGNKFLANIRETDAIGHVVRCFDND 110 >gi|327481915|gb|AEA85225.1| translation-associated GTPase [Pseudomonas stutzeri DSM 4166] Length = 366 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 34/158 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVKPERV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 64 IPTTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV--------- 112 Query: 261 ELSAYNS-ELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 + NS + ++ IEI+ L I D D+ ++ +A Sbjct: 113 -IHVANSVDPKRDIEIIDLELI-MADLDSCEKQLQRVA 148 >gi|242032799|ref|XP_002463794.1| hypothetical protein SORBIDRAFT_01g006280 [Sorghum bicolor] gi|241917648|gb|EER90792.1| hypothetical protein SORBIDRAFT_01g006280 [Sorghum bicolor] Length = 431 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 GI+GLPN GKST F A V K + A++PF T+ PN+G+V + Sbjct: 67 GIVGLPNVGKSTLFNAIVENGKAQAANFPFCTINPNVGVVAIPDPRLQVLSKLSKSQQTV 126 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 L DI G++K A +G G+G++FL + +L +V E++ Sbjct: 127 PTSIELVDIAGLVKGASKGEGLGNQFLSNIREVDSILQVVRCFEDD 172 >gi|229588275|ref|YP_002870394.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas fluorescens SBW25] gi|15042157|gb|AAK81938.1|AF292566_22 putative GTP-binding protein [Pseudomonas fluorescens] gi|229360141|emb|CAY46998.1| putative GTP-binding protein [Pseudomonas fluorescens SBW25] Length = 366 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 34/158 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVAMPDPRLQELAAIVNPKRI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV--------- 112 Query: 261 ELSAYNS-ELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 + NS + ++ IEI+ L I D D+ ++ ++A Sbjct: 113 -IHVSNSVDPKRDIEIIDLELI-FADLDSCEKQLQKVA 148 >gi|254244435|ref|ZP_04937757.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126197813|gb|EAZ61876.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length = 366 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 28/155 (18%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T++ ++PF T+ PN GIV E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLNALAEIVKPERV 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 DI G++ A +G G+G++FL + T + H+V E++ + + Sbjct: 64 LPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDD---------NVIH 114 Query: 264 AYNS-ELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 NS + ++ IEI+ L I D D+ ++ ++A Sbjct: 115 VSNSVDPKRDIEIIDLELI-FADLDSCEKQLQKVA 148 >gi|74004628|ref|XP_535967.2| PREDICTED: similar to Putative GTP-binding protein PTD004 isoform 1 [Canis familiaris] Length = 337 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|332306081|ref|YP_004433932.1| GTP-binding protein YchF [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173410|gb|AEE22664.1| GTP-binding protein YchF [Glaciecola agarilytica 4H-3-7+YE-5] Length = 363 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDKLAAIVDPKRIIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+++ A +G G+G++FL + T + H+V + + Sbjct: 66 TTMEFV--DIAGLVEGASKGEGLGNKFLANIRETDAIGHVVRCFDND 110 >gi|323388150|gb|ADX60346.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas fluorescens] Length = 366 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 33/142 (23%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNTGIVPMPDTRLDALAAIVNPKRI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV--------- 112 Query: 261 ELSAYNS-ELRKKIEIVGLSQI 281 + NS + ++ IEI+ L I Sbjct: 113 -IHVSNSVDPKRDIEIIDLELI 133 >gi|77460977|ref|YP_350484.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas fluorescens Pf0-1] gi|77384980|gb|ABA76493.1| putative GTP-binding protein [Pseudomonas fluorescens Pf0-1] Length = 366 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 34/158 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVNPKRI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV--------- 112 Query: 261 ELSAYNS-ELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 + NS + ++ IEI+ L I D D+ ++ ++A Sbjct: 113 -IHVSNSVDPKRDIEIIDLELI-FADLDSCEKQLQKVA 148 >gi|241949691|ref|XP_002417568.1| conserved hypothetical protein [Candida dubliniensis CD36] gi|223640906|emb|CAX45223.1| conserved hypothetical protein [Candida dubliniensis CD36] Length = 413 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 26/111 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L ++T A K +PFTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNALTDANAKCGAFPFTTIDPNKATGYLEIDCVCARFNKQDKCKPN 66 Query: 198 LGIVKEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G ++G + +L D+ G++ NAH G G+G++FL L+HIV A Sbjct: 67 YGYCRDGKRGVPIMLLDVAGLVPNAHLGRGLGNKFLSDLTEADCLIHIVDA 117 >gi|116753496|ref|YP_842614.1| translation-associated GTPase [Methanosaeta thermophila PT] gi|116664947|gb|ABK13974.1| GTP-binding conserved hypothetical protein TIGR00650 [Methanosaeta thermophila PT] Length = 390 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 22/107 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI---------VKEGYK------ 206 IG+ G PNAGKSTF + T A +IA+YPFTT+ N G+ V+ G + Sbjct: 4 IGLAGKPNAGKSTFFKAATLADVEIANYPFTTIDANHGVSYVRVKCPCVELGIEGGCGRC 63 Query: 207 ----EFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 F+ L D+ G++ +AH G G+G+ FL V++H++ A Sbjct: 64 INGSRFVPVELIDVAGLVPDAHLGRGLGNEFLDSLRLAEVVIHVLDA 110 >gi|260905867|ref|ZP_05914189.1| GTP-binding protein YchF [Brevibacterium linens BL2] Length = 361 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 17/100 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGY-KEFIL 210 IGI+GLPN GKST ++T+ + A+YPF T+ PN+G+V E + E IL Sbjct: 5 IGIVGLPNVGKSTMFNALTKNQVLAANYPFATIEPNVGVVPLPDARLTRLAEIFGSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI GI++ A +G G+G++FL + + ++ Sbjct: 65 NATVDFVDIAGIVRGASEGEGLGNQFLANIREAEAICQVI 104 >gi|218200636|gb|EEC83063.1| hypothetical protein OsI_28170 [Oryza sativa Indica Group] Length = 394 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 22/145 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF VT+ ++PF T+ PN V + F Sbjct: 27 IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEV 86 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 + DI G+++ AH G G+G+ FL H + H++ A E+ +D + Sbjct: 87 SAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPVRD 146 Query: 262 LSAYNSELR-KKIEIVGLSQIDTVD 285 L ELR K IE V ++ID ++ Sbjct: 147 LETIGEELRLKDIEFVQ-NKIDDLE 170 >gi|113953017|ref|YP_730143.1| GTP-dependent nucleic acid-binding protein EngD [Synechococcus sp. CC9311] gi|113880368|gb|ABI45326.1| GTP-binding protein YchF [Synechococcus sp. CC9311] Length = 363 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V A+ + A++PF T+ PN+G V KE I Sbjct: 5 GIVGLPNVGKSTLFNALVANAQAQAANFPFCTIEPNVGTVAVPDDRLQKLSDLSKSKELI 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A QG G+G++FL + ++H+V E++ Sbjct: 65 PTRMEFVDIAGLVKGASQGEGLGNKFLSNIREVDAIVHVVRCFEDD 110 >gi|88800288|ref|ZP_01115855.1| predicted GTPase, probable translation factor [Reinekea sp. MED297] gi|88777003|gb|EAR08211.1| predicted GTPase, probable translation factor [Reinekea sp. MED297] Length = 363 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 27/151 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------KEGYKEFI------- 209 GI+GLPN GKST ++T+A ++PF T+ PN G+V ++ E + Sbjct: 6 GIVGLPNVGKSTLFNALTQAGIDAENFPFCTIEPNTGVVPVPDPRQDKIAEIVKPQKSIA 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---EL 262 DI G++ A +G G+G++FL + T + H+V + + +D ++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFDNDNVIHVSNQVDPASDI 125 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKK 293 N+EL L+ +++VD L +K Sbjct: 126 EVINTEL-------ALADLESVDKQLLKLQK 149 >gi|261838188|gb|ACX97954.1| GTP-binding protein [Helicobacter pylori 51] Length = 366 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAESANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERV 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|150864346|ref|XP_001383121.2| hypothetical protein PICST_35157 [Scheffersomyces stipitis CBS 6054] gi|149385602|gb|ABN65092.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 413 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 26/111 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L S+T A K+ +PFTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNSLTDANAKVGAFPFTTIDPNKATGYLEIDCACARHKVSDLCKPN 66 Query: 198 LGIVKEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G ++G + +L D+ G++ NAH G G+G++FL L+HIV Sbjct: 67 YGYCRQGKRGVPIMLLDVAGLVPNAHLGRGLGNKFLGDLTEADCLIHIVDV 117 >gi|224030549|gb|ACN34350.1| unknown [Zea mays] Length = 431 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 GI+GLPN GKST F A V K + A++PF T+ PN+G+V + Sbjct: 67 GIVGLPNVGKSTLFNAIVENGKAQAANFPFCTISPNVGVVAIPDPRLQVLSKLSKSQQTV 126 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 L DI G++K A +G G+G++FL + +L +V E++ Sbjct: 127 PTSIELVDIAGLVKGASKGEGLGNQFLSNIREVDSILQVVRCFEDD 172 >gi|170723625|ref|YP_001751313.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas putida W619] gi|169761628|gb|ACA74944.1| GTP-binding protein YchF [Pseudomonas putida W619] Length = 366 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 29/140 (20%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 + GI+GLPN GKST ++T++ ++PF T+ PN GIV E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDARLAALAEIVKPNRI 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILDEL 262 DI G++ A +G G+G++FL + T + H+V E ENV + Sbjct: 64 LPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV----------I 113 Query: 263 SAYNS-ELRKKIEIVGLSQI 281 NS + ++ IEI+ L I Sbjct: 114 HVSNSVDPKRDIEIIDLELI 133 >gi|16082451|ref|NP_394940.1| GTP-binding protein [Thermoplasma acidophilum DSM 1728] gi|10640829|emb|CAC12607.1| GTP-binding protein [Thermoplasma acidophilum] Length = 360 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 13/122 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G PN GKS+ L +T ++ +I DY FTTL P GI++ E + D+PGII+N Sbjct: 61 ATVALVGFPNVGKSSLLNRLTNSESEIGDYAFTTLQPIPGILEYKGAEIQILDLPGIIEN 120 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA-AYQCILDELSAYNSEL-----RKKI 273 A G+ G L R L+ IV+ +VQA IL EL YN+ + R+ + Sbjct: 121 ASYGSARGREILSAV-RAADLIVIVT----DVQAGGIDKILTEL--YNAGIVVNRKRRNV 173 Query: 274 EI 275 EI Sbjct: 174 EI 175 >gi|260427023|ref|ZP_05781002.1| GTP-binding protein YchF [Citreicella sp. SE45] gi|260421515|gb|EEX14766.1| GTP-binding protein YchF [Citreicella sp. SE45] Length = 365 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 18/107 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLG--------------IVKEGY- 205 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G I K Sbjct: 5 MGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGEVAVPDARLDTLASIAKSQSI 64 Query: 206 --KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H++ E++ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFEDD 111 >gi|121602664|ref|YP_989280.1| translation-associated GTPase [Bartonella bacilliformis KC583] gi|120614841|gb|ABM45442.1| GTP-dependent nucleic acid-binding protein engD [Bartonella bacilliformis KC583] Length = 367 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 18/100 (18%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMKKIASIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI G+++ A +G G+G++FL + ++H++ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNKFLANIREVDAIIHVL 105 >gi|317180340|dbj|BAJ58126.1| translation-associated GTPase [Helicobacter pylori F32] Length = 366 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAESANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERV 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|307184431|gb|EFN70840.1| Developmentally-regulated GTP-binding protein 2 [Camponotus floridanus] Length = 363 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T + + A Y FTTL G+++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTLLSTLTATESEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A QG G G + + ++L ++ A +++VQ Q + EL + L KK Sbjct: 122 AAQGKGRGRQVIAVARTADLVLMMLDATKQDVQR--QLLEKELESVGIRLNKK 172 >gi|320101507|ref|YP_004177099.1| hypothetical protein Desmu_1323 [Desulfurococcus mucosus DSM 2162] gi|319753859|gb|ADV65617.1| GTP-binding conserved hypothetical protein TIGR00650 [Desulfurococcus mucosus DSM 2162] Length = 411 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 25/110 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI----VKEGYKEFILA------ 211 IG++G N GKST +++T A KIA++PFTT+ PN+G+ VK + E L Sbjct: 8 IGVVGKTNVGKSTLFSAMTLAPAKIANHPFTTIEPNIGVGHVRVKCAHVELGLPGCNPRS 67 Query: 212 ---------------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 D+ G+I A G G+G++F+ + VL+H+V A Sbjct: 68 GLCISGQRFIPVKVIDVAGLIPGASTGRGLGNKFMDDLRQADVLIHVVDA 117 >gi|198438391|ref|XP_002124995.1| PREDICTED: similar to Obg-like ATPase 1 (GTP-binding protein 9) isoform 1 [Ciona intestinalis] Length = 399 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFI---------- 209 IGI+GLPN GKSTF +T+++ ++PF T+ PN V + EF+ Sbjct: 25 IGIVGLPNVGKSTFFNVLTKSEASAENFPFCTIDPNESRVPVPDERWEFLCKYHKPASKV 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G++K A++G G+G+ FL H + H+ A ++ Sbjct: 85 PAFLSVVDIAGLVKGANEGQGLGNAFLSHISGCDAIFHMTRAFDD 129 >gi|157828784|ref|YP_001495026.1| GTP-dependent nucleic acid-binding protein EngD [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933512|ref|YP_001650301.1| GTP-binding protein YchF [Rickettsia rickettsii str. Iowa] gi|157801265|gb|ABV76518.1| translation-associated GTPase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908599|gb|ABY72895.1| GTP-binding protein, probable translation factor [Rickettsia rickettsii str. Iowa] Length = 365 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 22/108 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNL-------------------GIV 201 +GI+GLPN GKST ++T ++ A+YPF T+ PN G + Sbjct: 5 LGIVGLPNVGKSTLFNALTASQAADAANYPFCTIEPNSSKVLVPDARLHTLASLAGSGKI 64 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y E L DI G++K A +G G+G++FL H +LH++ E+ Sbjct: 65 IPSYIE--LVDIAGLVKGASKGEGLGNKFLSHIREVDAILHVLRCFED 110 >gi|320168892|gb|EFW45791.1| GTP binding protein 4 [Capsaspora owczarzaki ATCC 30864] Length = 640 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 14/180 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ VTRA ++ Y FTT +G + Y + + D PGI+ + Sbjct: 171 IILCGFPNVGKSSFMNQVTRADVEVQPYAFTTKSLFVGHTEYNYLRWQVIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + +R + L H+ +A+ + + QC I +++S +NS K I Sbjct: 230 ----LEERNTIEMQSITALAHLRAAVLYVLDLSEQCGHSIAEQVSLFNSIRPLFANKPII 285 Query: 276 VGLSQIDTVDSDTLARKKNELAT---QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 +GL++ID + D L K L + G + S++T + Q+ DK+ + R E Sbjct: 286 LGLNKIDVITVDKLHPDKRALINAIEEEGIITLPMSTLTAENVAQVKNTACDKLLAHRVE 345 >gi|313808133|gb|EFS46607.1| GTP-binding protein YchF [Propionibacterium acnes HL087PA2] Length = 357 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF------------- 208 IGI+GLPNAGKST ++T+ A+YPF T+ PN+G+V K Sbjct: 5 IGIVGLPNAGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDKRLDVLTEMFHSAKTI 64 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G+ FL + + + ++ Sbjct: 65 PATVSFVDIAGIVKGASKGEGMGNEFLSNIREADAICQVTRCFADD 110 >gi|313763996|gb|EFS35360.1| GTP-binding protein YchF [Propionibacterium acnes HL013PA1] gi|313814877|gb|EFS52591.1| GTP-binding protein YchF [Propionibacterium acnes HL059PA1] gi|313828040|gb|EFS65754.1| GTP-binding protein YchF [Propionibacterium acnes HL063PA2] gi|314915028|gb|EFS78859.1| GTP-binding protein YchF [Propionibacterium acnes HL005PA4] gi|314918641|gb|EFS82472.1| GTP-binding protein YchF [Propionibacterium acnes HL050PA1] gi|314920449|gb|EFS84280.1| GTP-binding protein YchF [Propionibacterium acnes HL050PA3] gi|314932123|gb|EFS95954.1| GTP-binding protein YchF [Propionibacterium acnes HL067PA1] gi|314954611|gb|EFS99017.1| GTP-binding protein YchF [Propionibacterium acnes HL027PA1] gi|314958590|gb|EFT02692.1| GTP-binding protein YchF [Propionibacterium acnes HL002PA1] gi|314968350|gb|EFT12449.1| GTP-binding protein YchF [Propionibacterium acnes HL037PA1] gi|315098915|gb|EFT70891.1| GTP-binding protein YchF [Propionibacterium acnes HL059PA2] gi|315100845|gb|EFT72821.1| GTP-binding protein YchF [Propionibacterium acnes HL046PA1] gi|315108063|gb|EFT80039.1| GTP-binding protein YchF [Propionibacterium acnes HL030PA2] gi|327450145|gb|EGE96799.1| GTP-binding protein YchF [Propionibacterium acnes HL087PA3] gi|327455299|gb|EGF01954.1| GTP-binding protein YchF [Propionibacterium acnes HL083PA2] gi|328752810|gb|EGF66426.1| GTP-binding protein YchF [Propionibacterium acnes HL087PA1] gi|328759266|gb|EGF72882.1| GTP-binding protein YchF [Propionibacterium acnes HL025PA2] Length = 357 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF------------- 208 IGI+GLPNAGKST ++T+ A+YPF T+ PN+G+V K Sbjct: 5 IGIVGLPNAGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDKRLDVLTEMFHSAKTI 64 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G+ FL + + + ++ Sbjct: 65 PATVSFVDIAGIVKGASKGEGMGNEFLSNIREADAICQVTRCFADD 110 >gi|307719760|ref|YP_003875292.1| GTP-dependent nucleic acid-binding protein EngD [Spirochaeta thermophila DSM 6192] gi|306533485|gb|ADN03019.1| GTP-dependent nucleic acid-binding protein EngD [Spirochaeta thermophila DSM 6192] Length = 369 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 21/108 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST +++T A + A+YPF T+ PN+GIV+ Sbjct: 4 NCGIVGLPNVGKSTIFSALTAAPAEAANYPFCTIDPNVGIVEVPDPRLYRIAEIIHPRKV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL + + ++ H+V E+ Sbjct: 64 VPAAMEFV--DIAGLVKGASKGEGLGNQFLANIRQVGIIAHVVRCFED 109 >gi|148273407|ref|YP_001222968.1| GTP-dependent nucleic acid-binding protein EngD [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831337|emb|CAN02293.1| putative GTP-binding protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 357 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 I I+GLPN GKST ++T+ + A+YPF T+ PN+G+V G ++ + Sbjct: 5 IAIVGLPNVGKSTLFNALTKNQVLAANYPFATIEPNVGVVNLPDPRLEVLAGLFGSEKIL 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI GI++ A +G G+G++FL + + +V E+ Sbjct: 65 PAPVSFVDIAGIVRGASEGEGLGNQFLANIREADAIAQVVRGFED 109 >gi|50842061|ref|YP_055288.1| translation-associated GTPase [Propionibacterium acnes KPA171202] gi|289425862|ref|ZP_06427616.1| GTP-binding protein YchF [Propionibacterium acnes SK187] gi|289426778|ref|ZP_06428506.1| GTP-binding protein YchF [Propionibacterium acnes J165] gi|295130144|ref|YP_003580807.1| GTP-binding protein YchF [Propionibacterium acnes SK137] gi|50839663|gb|AAT82330.1| putative ATP/GTP binding protein [Propionibacterium acnes KPA171202] gi|289153805|gb|EFD02512.1| GTP-binding protein YchF [Propionibacterium acnes SK187] gi|289160104|gb|EFD08280.1| GTP-binding protein YchF [Propionibacterium acnes J165] gi|291375782|gb|ADD99636.1| GTP-binding protein YchF [Propionibacterium acnes SK137] gi|313771473|gb|EFS37439.1| GTP-binding protein YchF [Propionibacterium acnes HL074PA1] gi|313791652|gb|EFS39770.1| GTP-binding protein YchF [Propionibacterium acnes HL110PA1] gi|313802261|gb|EFS43487.1| GTP-binding protein YchF [Propionibacterium acnes HL110PA2] gi|313811400|gb|EFS49114.1| GTP-binding protein YchF [Propionibacterium acnes HL083PA1] gi|313812583|gb|EFS50297.1| GTP-binding protein YchF [Propionibacterium acnes HL025PA1] gi|313818900|gb|EFS56614.1| GTP-binding protein YchF [Propionibacterium acnes HL046PA2] gi|313820727|gb|EFS58441.1| GTP-binding protein YchF [Propionibacterium acnes HL036PA1] gi|313822506|gb|EFS60220.1| GTP-binding protein YchF [Propionibacterium acnes HL036PA2] gi|313825698|gb|EFS63412.1| GTP-binding protein YchF [Propionibacterium acnes HL063PA1] gi|313830845|gb|EFS68559.1| GTP-binding protein YchF [Propionibacterium acnes HL007PA1] gi|313833273|gb|EFS70987.1| GTP-binding protein YchF [Propionibacterium acnes HL056PA1] gi|313839029|gb|EFS76743.1| GTP-binding protein YchF [Propionibacterium acnes HL086PA1] gi|314925642|gb|EFS89473.1| GTP-binding protein YchF [Propionibacterium acnes HL036PA3] gi|314959806|gb|EFT03908.1| GTP-binding protein YchF [Propionibacterium acnes HL002PA2] gi|314962379|gb|EFT06480.1| GTP-binding protein YchF [Propionibacterium acnes HL082PA1] gi|314973733|gb|EFT17829.1| GTP-binding protein YchF [Propionibacterium acnes HL053PA1] gi|314976380|gb|EFT20475.1| GTP-binding protein YchF [Propionibacterium acnes HL045PA1] gi|314979189|gb|EFT23283.1| GTP-binding protein YchF [Propionibacterium acnes HL072PA2] gi|314983337|gb|EFT27429.1| GTP-binding protein YchF [Propionibacterium acnes HL005PA1] gi|314986743|gb|EFT30835.1| GTP-binding protein YchF [Propionibacterium acnes HL005PA2] gi|314989485|gb|EFT33576.1| GTP-binding protein YchF [Propionibacterium acnes HL005PA3] gi|315077465|gb|EFT49525.1| GTP-binding protein YchF [Propionibacterium acnes HL053PA2] gi|315080208|gb|EFT52184.1| GTP-binding protein YchF [Propionibacterium acnes HL078PA1] gi|315084091|gb|EFT56067.1| GTP-binding protein YchF [Propionibacterium acnes HL027PA2] gi|315085293|gb|EFT57269.1| GTP-binding protein YchF [Propionibacterium acnes HL002PA3] gi|315089092|gb|EFT61068.1| GTP-binding protein YchF [Propionibacterium acnes HL072PA1] gi|315096508|gb|EFT68484.1| GTP-binding protein YchF [Propionibacterium acnes HL038PA1] gi|315107217|gb|EFT79193.1| GTP-binding protein YchF [Propionibacterium acnes HL030PA1] gi|327326758|gb|EGE68541.1| GTP-binding protein YchF [Propionibacterium acnes HL096PA2] gi|327330545|gb|EGE72292.1| GTP-binding protein YchF [Propionibacterium acnes HL096PA3] gi|327331084|gb|EGE72824.1| GTP-binding protein YchF [Propionibacterium acnes HL097PA1] gi|327443041|gb|EGE89695.1| GTP-binding protein YchF [Propionibacterium acnes HL043PA1] gi|327445164|gb|EGE91818.1| GTP-binding protein YchF [Propionibacterium acnes HL043PA2] gi|327446882|gb|EGE93536.1| GTP-binding protein YchF [Propionibacterium acnes HL013PA2] gi|327455128|gb|EGF01783.1| GTP-binding protein YchF [Propionibacterium acnes HL092PA1] gi|328752558|gb|EGF66174.1| GTP-binding protein YchF [Propionibacterium acnes HL020PA1] gi|328760247|gb|EGF73820.1| GTP-binding protein YchF [Propionibacterium acnes HL099PA1] gi|332674983|gb|AEE71799.1| GTP-dependent nucleic acid-binding protein EngD [Propionibacterium acnes 266] Length = 357 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF------------- 208 IGI+GLPNAGKST ++T+ A+YPF T+ PN+G+V K Sbjct: 5 IGIVGLPNAGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDKRLDVLTEMFHSAKTI 64 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G+ FL + + + ++ Sbjct: 65 PATVSFVDIAGIVKGASKGEGMGNEFLSNIREADAICQVTRCFADD 110 >gi|328907893|gb|EGG27655.1| GTP-binding protein YchF [Propionibacterium sp. P08] Length = 357 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF------------- 208 IGI+GLPNAGKST ++T+ A+YPF T+ PN+G+V K Sbjct: 5 IGIVGLPNAGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDKRLDVLTEIFHSAKTI 64 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G+ FL + + + ++ Sbjct: 65 PATVSFVDIAGIVKGASKGEGMGNEFLSNIREADAICQVTRCFADD 110 >gi|1698846|gb|AAC44620.1| GTP-binding protein [Thermoplasma acidophilum] Length = 360 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 13/122 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G PN GKS+ L +T ++ +I DY FTTL P GI++ E + D+PGII+N Sbjct: 61 ATVALVGFPNVGKSSLLNRLTNSESEIGDYAFTTLQPIPGILEYKGAEIQILDLPGIIEN 120 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA-AYQCILDELSAYNSEL-----RKKI 273 A G+ G L R L+ IV+ +VQA IL EL YN+ + R+ + Sbjct: 121 ASYGSARGREILSAV-RAADLIVIVT----DVQAGGIDKILTEL--YNAGIVVNRKRRNV 173 Query: 274 EI 275 EI Sbjct: 174 EI 175 >gi|282854457|ref|ZP_06263794.1| GTP-binding protein YchF [Propionibacterium acnes J139] gi|282583910|gb|EFB89290.1| GTP-binding protein YchF [Propionibacterium acnes J139] gi|314922862|gb|EFS86693.1| GTP-binding protein YchF [Propionibacterium acnes HL001PA1] gi|314966292|gb|EFT10391.1| GTP-binding protein YchF [Propionibacterium acnes HL082PA2] gi|314980818|gb|EFT24912.1| GTP-binding protein YchF [Propionibacterium acnes HL110PA3] gi|315090295|gb|EFT62271.1| GTP-binding protein YchF [Propionibacterium acnes HL110PA4] gi|315093457|gb|EFT65433.1| GTP-binding protein YchF [Propionibacterium acnes HL060PA1] gi|315103013|gb|EFT74989.1| GTP-binding protein YchF [Propionibacterium acnes HL050PA2] gi|327327073|gb|EGE68854.1| GTP-binding protein YchF [Propionibacterium acnes HL103PA1] Length = 357 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF------------- 208 IGI+GLPNAGKST ++T+ A+YPF T+ PN+G+V K Sbjct: 5 IGIVGLPNAGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDKRLDVLTEMFHSAKTI 64 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G+ FL + + + ++ Sbjct: 65 PATVSFVDIAGIVKGASKGEGMGNEFLSNIREADAICQVTRCFADD 110 >gi|313837016|gb|EFS74730.1| GTP-binding protein YchF [Propionibacterium acnes HL037PA2] gi|314929395|gb|EFS93226.1| GTP-binding protein YchF [Propionibacterium acnes HL044PA1] gi|314971520|gb|EFT15618.1| GTP-binding protein YchF [Propionibacterium acnes HL037PA3] Length = 357 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF------------- 208 IGI+GLPNAGKST ++T+ A+YPF T+ PN+G+V K Sbjct: 5 IGIVGLPNAGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDKRLDVLTEIFHSAKTI 64 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G+ FL + + + ++ Sbjct: 65 PATVSFVDIAGIVKGASKGEGMGNEFLSNIREADAICQVTRCFADD 110 >gi|330899763|gb|EGH31182.1| GTP-binding protein YchF [Pseudomonas syringae pv. japonica str. M301072PT] Length = 177 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 33/142 (23%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNPKRI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV--------- 112 Query: 261 ELSAYNS-ELRKKIEIVGLSQI 281 + NS + ++ IEI+ L I Sbjct: 113 -IHVSNSVDPKRDIEIIDLELI 133 >gi|255078490|ref|XP_002502825.1| predicted protein [Micromonas sp. RCC299] gi|226518091|gb|ACO64083.1| predicted protein [Micromonas sp. RCC299] Length = 373 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 24/110 (21%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST F A V + + A+YPF T+ PN GIV Sbjct: 6 GIVGLPNVGKSTLFNALVENSTAEAANYPFCTIEPNSGIVPVPDERLQALAAISGTSKDN 65 Query: 203 --EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A GAG+G++FL + ++H+V +++ Sbjct: 66 IVPTTVEFV--DIAGLVKGAADGAGLGNKFLANIRECDAIVHVVRCFDDD 113 >gi|330916112|ref|XP_003297300.1| hypothetical protein PTT_07647 [Pyrenophora teres f. teres 0-1] gi|311330117|gb|EFQ94608.1| hypothetical protein PTT_07647 [Pyrenophora teres f. teres 0-1] Length = 417 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L S+T A K+ ++PFTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNSLTDATSKVGNFPFTTIDPQRAIGYLQITCPCARLNLADRCKPN 66 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G EG + L D+ G++ AH G G+G+RFL L+H+V Sbjct: 67 YGSCAEGRRSVPIELLDVAGLVPGAHMGKGLGNRFLDDLRHADALVHVV 115 >gi|239614754|gb|EEQ91741.1| GTP-binding protein [Ajellomyces dermatitidis ER-3] Length = 406 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L S+T A K+ ++PFTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNSLTDASSKVGNFPFTTIDPQRAIGYLQVDCACKRFNVSDKCRPN 66 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G EG + L D+ G++ AH+G G+G+RFL L+H+V Sbjct: 67 YGGCHEGRRSVPIELLDVAGLVPGAHEGKGLGNRFLDDLRHADALIHVV 115 >gi|327354096|gb|EGE82953.1| GTP-binding protein [Ajellomyces dermatitidis ATCC 18188] Length = 416 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L S+T A K+ ++PFTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNSLTDASSKVGNFPFTTIDPQRAIGYLQVDCACKRFNVSDKCRPN 66 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G EG + L D+ G++ AH+G G+G+RFL L+H+V Sbjct: 67 YGGCHEGRRSVPIELLDVAGLVPGAHEGKGLGNRFLDDLRHADALIHVV 115 >gi|89069313|ref|ZP_01156672.1| GTP-binding protein YchF [Oceanicola granulosus HTCC2516] gi|89045080|gb|EAR51151.1| GTP-binding protein YchF [Oceanicola granulosus HTCC2516] Length = 361 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++TR A + A++PF T+ PN+G V K+ Sbjct: 1 MGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLDRLAAIAQSKQI 60 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + + H++ E+ Sbjct: 61 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIREVDAIAHVLRCFED 106 >gi|317013990|gb|ADU81426.1| GTP-binding protein YchF [Helicobacter pylori Gambia94/24] Length = 366 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAESANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERI 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD 111 >gi|296271018|ref|YP_003653650.1| GTP-binding protein YchF [Thermobispora bispora DSM 43833] gi|296093805|gb|ADG89757.1| GTP-binding protein YchF [Thermobispora bispora DSM 43833] Length = 362 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 18/101 (17%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIV------KEGYKEFI----- 209 IGI+GLPN GKST ++T+ AK A+YPF T+ PN+GIV E E Sbjct: 5 IGIVGLPNVGKSTLFNALTKSAKALAANYPFATIEPNVGIVGVPDPRLEKLAEMFGSARI 64 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI G+++ A G G G++FL H T + ++ Sbjct: 65 VPAKVEFVDIAGLVRGASVGQGRGNQFLAHIRETDAICQVI 105 >gi|70732483|ref|YP_262246.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas fluorescens Pf-5] gi|68346782|gb|AAY94388.1| GTP-binding protein YchF [Pseudomonas fluorescens Pf-5] Length = 366 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 32/157 (20%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVVPERV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDE 261 EF+ DI G++ A +G G+G++FL + T + H+V E++ + Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDD---------NV 112 Query: 262 LSAYNS-ELRKKIEIVGLSQIDTVDSDTLARKKNELA 297 + NS + ++ IEI+ L I D D+ ++ ++A Sbjct: 113 IHVSNSVDPKRDIEIIDLELI-FADLDSCEKQLQKVA 148 >gi|261189285|ref|XP_002621054.1| GTP-binding protein [Ajellomyces dermatitidis SLH14081] gi|239591839|gb|EEQ74420.1| GTP-binding protein [Ajellomyces dermatitidis SLH14081] Length = 416 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L S+T A K+ ++PFTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNSLTDASSKVGNFPFTTIDPQRAIGYLQVDCACKRFNVSDKCRPN 66 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G EG + L D+ G++ AH+G G+G+RFL L+H+V Sbjct: 67 YGGCHEGRRSVPIELLDVAGLVPGAHEGKGLGNRFLDDLRHADALIHVV 115 >gi|254172054|ref|ZP_04878730.1| GTP-binding protein [Thermococcus sp. AM4] gi|214033950|gb|EEB74776.1| GTP-binding protein [Thermococcus sp. AM4] Length = 397 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 24/110 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG----IVKEGYKEF-------- 208 +IG++G PN GKSTF ++ T IA+YPFTT+ N+G I + KE Sbjct: 2 EIGVVGKPNVGKSTFFSAATLVDVDIANYPFTTIDANVGVSYAIAEHPCKELGCKPNPQN 61 Query: 209 ------------ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 + D+ G++ AH+G G+G++FL L+H++ A Sbjct: 62 YEYRDGKALIPIKMIDVAGLVPGAHEGRGLGNKFLDDLRMASALIHVIDA 111 >gi|116253221|ref|YP_769059.1| GTP-dependent nucleic acid-binding protein EngD [Rhizobium leguminosarum bv. viciae 3841] gi|115257869|emb|CAK08967.1| putative GTP-dependent nucleic acid-binding protein [Rhizobium leguminosarum bv. viciae 3841] Length = 371 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V KE I Sbjct: 10 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAKSKELI 69 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 70 PTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDS 115 >gi|320327399|gb|EFW83413.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas syringae pv. glycinea str. race 4] gi|330881890|gb|EGH16039.1| GTP-binding protein YchF [Pseudomonas syringae pv. glycinea str. race 4] Length = 366 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 33/142 (23%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNPNRI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV--------- 112 Query: 261 ELSAYNS-ELRKKIEIVGLSQI 281 + NS + ++ IEI+ L I Sbjct: 113 -IHVSNSVDPKRDIEIIDLELI 133 >gi|222086601|ref|YP_002545135.1| GTP-binding protein [Agrobacterium radiobacter K84] gi|221724049|gb|ACM27205.1| GTP-binding protein [Agrobacterium radiobacter K84] Length = 367 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMEQLAQIAKSKELI 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDS 111 >gi|218681498|ref|ZP_03529385.1| translation-associated GTPase [Rhizobium etli CIAT 894] Length = 249 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAKSKELI 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDS 111 >gi|289647279|ref|ZP_06478622.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas syringae pv. aesculi str. 2250] Length = 366 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 33/142 (23%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNPKRI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV--------- 112 Query: 261 ELSAYNS-ELRKKIEIVGLSQI 281 + NS + ++ IEI+ L I Sbjct: 113 -IHVSNSVDPKRDIEIIDLELI 133 >gi|71006336|ref|XP_757834.1| hypothetical protein UM01687.1 [Ustilago maydis 521] gi|46097270|gb|EAK82503.1| hypothetical protein UM01687.1 [Ustilago maydis 521] Length = 367 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 16/136 (11%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIK 218 A + +IG P+ GKS+FL+ VT K + A Y FTTL G+++ EG K IL D+PGII+ Sbjct: 63 ARVALIGFPSVGKSSFLSKVTDTKSEAAAYEFTTLTCQPGVLEYEGAKIQIL-DLPGIIE 121 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A +G G G + + + +++ ++ A + + A L K++E VG+ Sbjct: 122 GASEGKGRGRQVVAVAKTADMIIIMLDATKPDTHRAL-------------LEKELEAVGI 168 Query: 279 SQIDTVDSDTLARKKN 294 +++ D + RKKN Sbjct: 169 -RLNKSKPDVVLRKKN 183 >gi|298485673|ref|ZP_07003752.1| GTP-binding and nucleic acid-binding protein YchF [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159699|gb|EFI00741.1| GTP-binding and nucleic acid-binding protein YchF [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 366 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 33/142 (23%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNPKRV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV--------- 112 Query: 261 ELSAYNS-ELRKKIEIVGLSQI 281 + NS + ++ IEI+ L I Sbjct: 113 -IHVSNSVDPKRDIEIIDLELI 133 >gi|163752630|ref|ZP_02159805.1| hypothetical protein KT99_00446 [Shewanella benthica KT99] gi|161327483|gb|EDP98694.1| hypothetical protein KT99_00446 [Shewanella benthica KT99] Length = 363 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 24/129 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T A + +++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTNAGIEASNFPFCTIEPNTGVVPVPDARLDALAKIVNPERVMP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LD 260 EF+ DI G++ A +G G+G++FL + T + H+V E EN+ I + Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEDENIVHVANKISPAE 123 Query: 261 ELSAYNSEL 269 ++ N+EL Sbjct: 124 DIEVINTEL 132 >gi|317179067|dbj|BAJ56855.1| translation-associated GTPase [Helicobacter pylori F30] Length = 366 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 22/108 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 +GI+GLPN GKS+ ++T+ + + A+YPF T+ PN IV Sbjct: 5 VGIVGLPNVGKSSTFNALTKTQNAESANYPFCTIEPNKAIVNVPDRRLDALAQIVKPERV 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G+IK A +G G+G++FL + + V+L +V E+ Sbjct: 65 LHSVVEFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFED 110 >gi|257481999|ref|ZP_05636040.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330988614|gb|EGH86717.1| GTP-binding protein YchF [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008859|gb|EGH88915.1| GTP-binding protein YchF [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 366 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 33/142 (23%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNPKRI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV--------- 112 Query: 261 ELSAYNS-ELRKKIEIVGLSQI 281 + NS + ++ IEI+ L I Sbjct: 113 -IHVSNSVDPKRDIEIIDLELI 133 >gi|71733759|ref|YP_273260.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas syringae pv. phaseolicola 1448A] gi|302186452|ref|ZP_07263125.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas syringae pv. syringae 642] gi|71554312|gb|AAZ33523.1| GTP-binding protein YchF [Pseudomonas syringae pv. phaseolicola 1448A] gi|320325682|gb|EFW81743.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas syringae pv. glycinea str. B076] gi|330887873|gb|EGH20534.1| GTP-binding protein YchF [Pseudomonas syringae pv. mori str. 301020] Length = 366 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 33/142 (23%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNPKRI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV--------- 112 Query: 261 ELSAYNS-ELRKKIEIVGLSQI 281 + NS + ++ IEI+ L I Sbjct: 113 -IHVSNSVDPKRDIEIIDLELI 133 >gi|66044194|ref|YP_234035.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas syringae pv. syringae B728a] gi|63254901|gb|AAY35997.1| Conserved hypothetical protein 92 [Pseudomonas syringae pv. syringae B728a] gi|330972806|gb|EGH72872.1| GTP-binding protein YchF [Pseudomonas syringae pv. aceris str. M302273PT] Length = 366 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 33/142 (23%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNPKRI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV--------- 112 Query: 261 ELSAYNS-ELRKKIEIVGLSQI 281 + NS + ++ IEI+ L I Sbjct: 113 -IHVSNSVDPKRDIEIIDLELI 133 >gi|13540832|ref|NP_110520.1| GTPase [Thermoplasma volcanium GSS1] gi|14324215|dbj|BAB59143.1| GTP1/OBG family GTP-binding protein [Thermoplasma volcanium GSS1] Length = 360 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 11/121 (9%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G PN GKS+ L +T ++ ++ Y FTTL G+++ E + D+PGII+N Sbjct: 61 ATVALVGFPNVGKSSLLNVLTNSESEVGSYAFTTLKAIPGVMEYKGAEIQILDLPGIIEN 120 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL-----RKKIE 274 A GAG G L T R+ L+ IV+ +E I+ EL YNS + RK IE Sbjct: 121 ASYGAGRGREIL-STVRSADLIVIVTDVE---TGGLDKIVKEL--YNSGIVVNRRRKNIE 174 Query: 275 I 275 I Sbjct: 175 I 175 >gi|289627926|ref|ZP_06460880.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330868890|gb|EGH03599.1| GTP-binding protein YchF [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 366 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 33/142 (23%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNPKRI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV--------- 112 Query: 261 ELSAYNS-ELRKKIEIVGLSQI 281 + NS + ++ IEI+ L I Sbjct: 113 -IHVSNSVDPKRDIEIIDLELI 133 >gi|218674103|ref|ZP_03523772.1| translation-associated GTPase [Rhizobium etli GR56] Length = 367 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAKSKELI 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDS 111 >gi|209550350|ref|YP_002282267.1| GTP-dependent nucleic acid-binding protein EngD [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536106|gb|ACI56041.1| GTP-binding protein YchF [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 367 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAKSKELI 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDS 111 >gi|283786852|ref|YP_003366717.1| GTP-binding protein [Citrobacter rodentium ICC168] gi|282950306|emb|CBG89953.1| GTP-binding protein [Citrobacter rodentium ICC168] Length = 426 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 13/173 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNQITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKI 273 ++ H L+ T + +LLH+V A + VQ A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVVDAADVRVQENIDAVDTVLEEIDAHEIPT---- 312 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++E + + S+ TG GIPQ+ + L +++ Sbjct: 313 -LMVMNKIDMLDDFAPRIDRDE---ENKPIRVWLSAQTGAGIPQLFQALTERL 361 >gi|126735039|ref|ZP_01750785.1| hypothetical protein RCCS2_14219 [Roseobacter sp. CCS2] gi|126715594|gb|EBA12459.1| hypothetical protein RCCS2_14219 [Roseobacter sp. CCS2] Length = 365 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 18/107 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G V K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGDVAVPDARLDKLAAIASSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 I DI G++K A +G G+G++FL + + H++ E++ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIRECDAIAHVLRCFEDD 111 >gi|307105683|gb|EFN53931.1| hypothetical protein CHLNCDRAFT_25367 [Chlorella variabilis] Length = 370 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A AK + A++PF T+ PN+GIV G ++ I Sbjct: 6 GIVGLPNIGKSTMFNALCENAKAQAANFPFCTIEPNVGIVAVPDPRLQELSKISGSEKII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++K A +G G+G++FL + ++ +V E+ Sbjct: 66 PTSVEFVDIAGLVKGASKGEGLGNQFLANIRECDSIVQVVRCFED 110 >gi|162329633|ref|YP_470525.2| translation-associated GTPase [Rhizobium etli CFN 42] Length = 367 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAKSKELI 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDS 111 >gi|156549535|ref|XP_001602657.1| PREDICTED: similar to GA19430-PA [Nasonia vitripennis] Length = 363 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T + + A Y FTTL G+++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTLLSTLTHTESEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A QG G G + + ++L ++ A +++VQ Q + EL + L K+ Sbjct: 122 AAQGKGRGRQVIAVARTADLILMMLDATKQDVQR--QLLEKELESVGIRLNKR 172 >gi|289678418|ref|ZP_06499308.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas syringae pv. syringae FF5] gi|330975568|gb|EGH75634.1| GTP-binding protein YchF [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 366 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 33/142 (23%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNPKRI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILD 260 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV--------- 112 Query: 261 ELSAYNS-ELRKKIEIVGLSQI 281 + NS + ++ IEI+ L I Sbjct: 113 -IHVSNSVDPKRDIEIIDLELI 133 >gi|255728311|ref|XP_002549081.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240133397|gb|EER32953.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 414 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 26/111 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L S+T A K +PFTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNSLTDANAKCGAFPFTTIDPNKATGYLEIDCACARFNKQDKCKPN 66 Query: 198 LGIVKEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G + G + +L D+ G++ NAH G G+G++FL L+HI+ A Sbjct: 67 YGYCRNGKRGVPIMLLDVAGLVPNAHLGRGLGNKFLSDLTEADCLIHIIDA 117 >gi|289580328|ref|YP_003478794.1| hypothetical protein Nmag_0647 [Natrialba magadii ATCC 43099] gi|289529881|gb|ADD04232.1| GTPase of unknown function domain protein [Natrialba magadii ATCC 43099] Length = 392 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 22/107 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------------------V 201 I + G PNAGKSTF + T A+ +A+YPFTT+ N G+ Sbjct: 4 IALAGKPNAGKSTFYTAATMAEVDVANYPFTTIDANRGVSYVRTDCPCLERDERCNADDC 63 Query: 202 KEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 ++G Y L D+ G++ AH+G G+G++FL V+++++ A Sbjct: 64 EDGKRYVPIELIDVAGLVPGAHEGKGLGNQFLDELTNADVIINVIDA 110 >gi|218513338|ref|ZP_03510178.1| translation-associated GTPase [Rhizobium etli 8C-3] Length = 310 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAKSKELI 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDS 111 >gi|190892774|ref|YP_001979316.1| GTP-binding protein [Rhizobium etli CIAT 652] gi|190698053|gb|ACE92138.1| putative GTP-binding protein [Rhizobium etli CIAT 652] Length = 367 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAKSKELI 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDS 111 >gi|220904219|ref|YP_002479531.1| GTP-dependent nucleic acid-binding protein EngD [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868518|gb|ACL48853.1| GTP-binding protein YchF [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 367 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 IGI+GLPN GKST ++T+A+ + A+YPF T+ PN V Sbjct: 5 IGIVGLPNVGKSTLFNALTKAQNAQAANYPFCTIEPNKATVAVPDTRLQDLTNKAKPQKT 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 +FI DI G+++ A +G G+G++FL + ++H+V E EN+ Sbjct: 65 INASVDFI--DIAGLVRGASKGEGLGNQFLGNIRECAAIVHVVRCFEDENI 113 >gi|241205735|ref|YP_002976831.1| GTP-dependent nucleic acid-binding protein EngD [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859625|gb|ACS57292.1| GTP-binding protein YchF [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 367 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAKSKELI 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDS 111 >gi|148653706|ref|YP_001280799.1| GTP-dependent nucleic acid-binding protein EngD [Psychrobacter sp. PRwf-1] gi|148572790|gb|ABQ94849.1| GTP-binding protein YchF [Psychrobacter sp. PRwf-1] Length = 363 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 26/132 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T PN+GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNVGIVPVPDPRLNKLAEIVKPERV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQC 257 EF+ DI G++ A QG G+G++FL + T + H+V +++ V Sbjct: 64 LPTTMEFV--DIAGLVAGASQGEGMGNQFLANIRETDAIAHVVRCFDDDNVIHVDGRVSP 121 Query: 258 ILDELSAYNSEL 269 I D++ N+EL Sbjct: 122 I-DDIETINTEL 132 >gi|254282461|ref|ZP_04957429.1| GTP-binding protein YchF [gamma proteobacterium NOR51-B] gi|219678664|gb|EED35013.1| GTP-binding protein YchF [gamma proteobacterium NOR51-B] Length = 319 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 24/129 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A + ++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAQNFPFCTIEPNAGVVPVPDPRQDKIAAIVKPDKTIA 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-NVQAAYQCI--LD 260 EF+ DI G++ A +G G+G++FL + T + H+V E+ NV I L Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDPNVIHVANAIDPLA 123 Query: 261 ELSAYNSEL 269 ++ N+EL Sbjct: 124 DIEIINTEL 132 >gi|118431703|ref|NP_148347.2| GTP-binding protein [Aeropyrum pernix K1] gi|116063026|dbj|BAA81062.2| GTP-binding protein [Aeropyrum pernix K1] Length = 389 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 56/99 (56%), Gaps = 2/99 (2%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +IG PN+GKS+ LA++T AKP++ADYPFTT P G++ +F + D P ++ + G Sbjct: 86 LIGPPNSGKSSILAALTNAKPEVADYPFTTRMPRAGMLPYEDIQFQIVDTPPLLPGS--G 143 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 + + +R L ++ + S + N+ ++ E+ Sbjct: 144 SSVNNRVLGLARNADAIILVFSLDDPNLVETIDAVVREV 182 >gi|75676694|ref|YP_319115.1| translation-associated GTPase [Nitrobacter winogradskyi Nb-255] gi|74421564|gb|ABA05763.1| Conserved hypothetical protein 92 [Nitrobacter winogradskyi Nb-255] Length = 365 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 GI+GLPN GKST ++T A + A+YPF T+ PN+G V E K Sbjct: 6 GIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGAVAVPDPRLGRLAEVAKSAQII 65 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+++ A +G G+G++FL + + H+V E++ Sbjct: 66 PTQLTFVDIAGLVRGASKGEGLGNQFLANIREVDAVAHVVRCFEDS 111 >gi|330941710|gb|EGH44467.1| GTP-binding protein YchF [Pseudomonas syringae pv. pisi str. 1704B] Length = 366 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 22/111 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLAALAAIVNPKRI 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ DI G++ A +G G+G++FL + T + H+V E ENV Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENV 112 >gi|257053342|ref|YP_003131175.1| translation-associated GTPase [Halorhabdus utahensis DSM 12940] gi|256692105|gb|ACV12442.1| GTP-binding conserved hypothetical protein TIGR00650 [Halorhabdus utahensis DSM 12940] Length = 393 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 22/107 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 + + G PNAGKSTF + T A +A+YPFTT+ N G+ Sbjct: 4 LALAGKPNAGKSTFYTAATMADVDVANYPFTTIDANRGVSHARTQCPCLDLDERCGNDRC 63 Query: 203 ---EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 + Y L D+ G++ AH+G G+G++FL +LH+V A Sbjct: 64 HDGKRYVPVKLLDVAGLVPGAHEGRGLGNQFLDELTDADAILHVVDA 110 >gi|295107494|emb|CBL05037.1| GTP-binding protein YchF [Gordonibacter pamelaeae 7-10-1-b] Length = 354 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 21/102 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++T A+YPF T+ PN+GIV Sbjct: 5 IGIVGLPNVGKSTLFTALTNKGGLAANYPFATIEPNVGIVPVPDARLDALAEIDHPARIV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 EF+ DI G++ A QG G+G++FL + T + +V Sbjct: 65 PATVEFV--DIAGLVAGASQGEGLGNQFLANIRETDAICEVV 104 >gi|294655341|ref|XP_457473.2| DEHA2B11946p [Debaryomyces hansenii CBS767] gi|199429881|emb|CAG85477.2| DEHA2B11946p [Debaryomyces hansenii] Length = 415 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 I ++G P+AGKST L S+T A K+ +PFTT+ PN Sbjct: 7 IALVGKPSAGKSTTLNSLTDANAKVGAFPFTTIDPNKATGYLEVDCACARFGKQALCKPN 66 Query: 198 LGIVKEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G ++G + +L D+ G++ NAH G G+G++FL L+HIV Sbjct: 67 YGYCRDGKRGVPIMLLDVAGLVPNAHLGKGLGNKFLGDLTEADCLIHIV 115 >gi|118576526|ref|YP_876269.1| GTPase [Cenarchaeum symbiosum A] gi|118195047|gb|ABK77965.1| GTPase [Cenarchaeum symbiosum A] Length = 406 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP--------NLGIVKE---------- 203 IGIIG N GK+TF S T + +++ YPFTT P L + +E Sbjct: 5 IGIIGKTNTGKTTFFNSATLSSSEVSTYPFTTKQPASSEASAITLCVHREFGVEDNPRNS 64 Query: 204 ----GYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G++ L D+PG++K A +G G+G+RFL ++ LLH+V A Sbjct: 65 RCVDGWRHTPIELMDLPGLVKGAWRGKGLGNRFLSIAAQSDALLHVVDA 113 >gi|50955255|ref|YP_062543.1| translation-associated GTPase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951737|gb|AAT89438.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str. CTCB07] Length = 356 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 17/100 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI GLPN GKST ++T+ A+YPF T+ PN+G+V G + + Sbjct: 5 IGIAGLPNVGKSTLFNALTKNDALAANYPFATIEPNVGVVNLPDPRLGKLAEIFGSERIL 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 A DI GI+K A +G G+G++FL + + +V Sbjct: 65 PAPVSFVDIAGIVKGASEGEGLGNKFLANIREADAIAQVV 104 >gi|257459659|ref|ZP_05624768.1| GTP-binding protein YchF [Campylobacter gracilis RM3268] gi|257443084|gb|EEV18218.1| GTP-binding protein YchF [Campylobacter gracilis RM3268] Length = 367 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 18/105 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPN----------LG----IVKEG-- 204 +GI+GLPN GKST +++ A+ A +YPF T+ PN LG IVK G Sbjct: 5 VGIVGLPNVGKSTTFNALSGAQNAQAQNYPFCTIEPNKAVVPVPDARLGKLAQIVKPGRI 64 Query: 205 -YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G+++ A +G G+G++FL + ++LHIV E Sbjct: 65 VHSTIEFVDIAGLVRGASKGEGLGNKFLSNIRECEIILHIVRCFE 109 >gi|242278061|ref|YP_002990190.1| GTP-binding protein YchF [Desulfovibrio salexigens DSM 2638] gi|242120955|gb|ACS78651.1| GTP-binding protein YchF [Desulfovibrio salexigens DSM 2638] Length = 366 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV------------------- 201 IGI+GLPN GKST ++T+A+ + A+Y F T+ PN +V Sbjct: 5 IGIVGLPNVGKSTLFNALTKAQNAESANYAFCTIEPNKAVVPVPDERIDKLAELVNPQRV 64 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 ++ +FI DI G+++ A +G G+G++FL + T +LH+V + + Sbjct: 65 QQSTVDFI--DIAGLVEGASKGEGLGNKFLGNIRETQAILHVVRCFDND 111 >gi|219124473|ref|XP_002182527.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217405873|gb|EEC45814.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 386 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 22/108 (20%) Query: 162 IGIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLG-------------------IV 201 +GI+GLPN GKST F A V ++ A++PF T+ PN+ V Sbjct: 5 VGILGLPNVGKSTLFNALVQKSIAHAANFPFCTIDPNVAPIPVPDPYLERLGRVAQSKAV 64 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 K E++ D+ G+ K AH+G G+G+RFL + HI+ A E+ Sbjct: 65 KPATMEWV--DVAGLAKGAHRGEGLGNRFLASLRECDAICHIIRAFED 110 >gi|329897179|ref|ZP_08271919.1| GTP-binding and nucleic acid-binding protein YchF [gamma proteobacterium IMCC3088] gi|328921334|gb|EGG28728.1| GTP-binding and nucleic acid-binding protein YchF [gamma proteobacterium IMCC3088] Length = 364 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A ++PF T+ PN G+V +E Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIDAENFPFCTIEPNSGVVPVPDPRQTEISKLVKPEREVS 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL + T + H+V ++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFSDD 110 >gi|71654923|ref|XP_816072.1| GTP-binding protein [Trypanosoma cruzi strain CL Brener] gi|70881175|gb|EAN94221.1| GTP-binding protein, putative [Trypanosoma cruzi] Length = 368 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 18/104 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLG---IVKEGYK------------ 206 GIIGLPN GKST ++T ++ K ++PF T+ NL +V + + Sbjct: 15 GIIGLPNVGKSTLFNALTCSQQAKTGNFPFCTINANLARVPVVDDRLRRLAAFAGAQRIV 74 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 E LAD+ G+I+ A +GAG+G++FL +LLH+V E Sbjct: 75 DVEIDLADVAGLIEGASKGAGLGNKFLADIRPCTILLHMVRCFE 118 >gi|307244835|ref|ZP_07526934.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307247010|ref|ZP_07529064.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249233|ref|ZP_07531230.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307251555|ref|ZP_07533462.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256055|ref|ZP_07537843.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260486|ref|ZP_07542180.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307262616|ref|ZP_07544246.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306854280|gb|EFM86486.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306856462|gb|EFM88611.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858757|gb|EFM90816.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306861019|gb|EFM93025.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306865477|gb|EFM97372.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306869798|gb|EFN01581.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306872039|gb|EFN03753.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 356 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 17/103 (16%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI--------- 209 +GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 1 MGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLPTT 60 Query: 210 --LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL + T + H+V E + Sbjct: 61 MEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEND 103 >gi|294786763|ref|ZP_06752017.1| GTP-binding protein YchF [Parascardovia denticolens F0305] gi|294485596|gb|EFG33230.1| GTP-binding protein YchF [Parascardovia denticolens F0305] Length = 364 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 IGI+GLPN GKST ++TR +YPF T+ PN GIV G ++ + Sbjct: 8 IGIVGLPNVGKSTLFNALTRNNVLAENYPFATIEPNTGIVPLPDSRLAVLAKLVGTEKIV 67 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI GI+K A +G G+G++FL + + + +++ Sbjct: 68 PATVTFVDIAGIVKGASEGEGLGNQFLANIREADAICEVARVFQDD 113 >gi|94500013|ref|ZP_01306548.1| GTP-binding protein, HSR1-like [Oceanobacter sp. RED65] gi|94427871|gb|EAT12846.1| GTP-binding protein, HSR1-like [Oceanobacter sp. RED65] Length = 364 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 6 GIVGLPNVGKSTLFNALTKSGIGAENFPFCTIEPNSGIVPMPDPRLDKLAAIVSPEKVIP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++K A +G G+G++FL + T + H+V E+ Sbjct: 66 TTMEFV--DIAGLVKGASKGEGLGNQFLANIRETDAIAHVVRCFED 109 >gi|315226385|ref|ZP_07868173.1| GTP-dependent nucleic acid-binding protein EngD [Parascardovia denticolens DSM 10105] gi|315120517|gb|EFT83649.1| GTP-dependent nucleic acid-binding protein EngD [Parascardovia denticolens DSM 10105] Length = 361 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 IGI+GLPN GKST ++TR +YPF T+ PN GIV G ++ + Sbjct: 5 IGIVGLPNVGKSTLFNALTRNNVLAENYPFATIEPNTGIVPLPDSRLAVLAKLVGTEKIV 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI GI+K A +G G+G++FL + + + +++ Sbjct: 65 PATVTFVDIAGIVKGASEGEGLGNQFLANIREADAICEVARVFQDD 110 >gi|307253789|ref|ZP_07535643.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258245|ref|ZP_07539988.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306863273|gb|EFM95213.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867705|gb|EFM99550.1| GTP-dependent nucleic acid-binding protein engD [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 356 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 17/103 (16%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI--------- 209 +GLPN GKST ++T+A + A+YPF T+ PN G+V + E + Sbjct: 1 MGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERVLPTT 60 Query: 210 --LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL + T + H+V E + Sbjct: 61 MEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFEND 103 >gi|74204760|dbj|BAE35446.1| unnamed protein product [Mus musculus] Length = 396 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T + ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSLASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|149378002|ref|ZP_01895727.1| predicted GTPase, probable translation factor [Marinobacter algicola DG893] gi|149357711|gb|EDM46208.1| predicted GTPase, probable translation factor [Marinobacter algicola DG893] Length = 363 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 21/109 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN G+V Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIGAENFPFCTIEPNAGVVAMPDPRLNKLAEIVKPEKV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+++ A +G G+G++FL + +T + H+V E++ Sbjct: 64 VATTMEFV--DIAGLVEGASKGEGLGNQFLANIRQTDAIAHVVRCFEDD 110 >gi|145240259|ref|XP_001392776.1| hypothetical protein ANI_1_934074 [Aspergillus niger CBS 513.88] gi|134077291|emb|CAK45631.1| unnamed protein product [Aspergillus niger] Length = 414 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L S+T A K+ ++PFTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNSLTDASSKVGNFPFTTIDPQRAIGYLQIECACQRFNVSDKCKPN 66 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G EG + L D+ G++ AHQG G+G++FL L+H+V Sbjct: 67 YGGCVEGRRSVPIELLDVAGLVPGAHQGRGLGNKFLDDLRHADALIHVV 115 >gi|68464909|ref|XP_723532.1| hypothetical protein CaO19.4846 [Candida albicans SC5314] gi|68465286|ref|XP_723342.1| hypothetical protein CaO19.12309 [Candida albicans SC5314] gi|46445369|gb|EAL04638.1| hypothetical protein CaO19.12309 [Candida albicans SC5314] gi|46445566|gb|EAL04834.1| hypothetical protein CaO19.4846 [Candida albicans SC5314] gi|238878608|gb|EEQ42246.1| hypothetical protein CAWG_00449 [Candida albicans WO-1] Length = 413 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 26/111 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L ++T A K +PFTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNALTDANAKCGAFPFTTIDPNKATGYLEIDCACARFNKQDKCKPN 66 Query: 198 LGIVKEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G + G + +L D+ G++ NAH G G+G++FL L+HIV A Sbjct: 67 YGYCRNGKRGVPIMLLDVAGLVPNAHLGRGLGNKFLSDLTEADCLIHIVDA 117 >gi|193657389|ref|XP_001950750.1| PREDICTED: developmentally-regulated GTP-binding protein 2-like [Acyrthosiphon pisum] Length = 363 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T + + A Y FTTL G+++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTLLSTLTHTESEAASYEFTTLTCIPGVIEYKDANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A QG G G + + ++L ++ A ++++Q Q + EL + L K+ Sbjct: 122 ASQGKGRGRQVIAVARTADLVLMMLDATKQDIQR--QLLEKELESVGIRLNKR 172 >gi|227822867|ref|YP_002826839.1| GTP-dependent nucleic acid-binding protein EngD [Sinorhizobium fredii NGR234] gi|227341868|gb|ACP26086.1| GTP-binding protein, putative [Sinorhizobium fredii NGR234] Length = 367 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDARMRKLADIAKSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAVVHVLRCFEDD 111 >gi|209886300|ref|YP_002290157.1| GTP-binding protein YchF [Oligotropha carboxidovorans OM5] gi|209874496|gb|ACI94292.1| GTP-binding protein YchF [Oligotropha carboxidovorans OM5] Length = 365 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 GI+GLPN GKST ++T A + A+YPF T+ PN+G V E K Sbjct: 6 GIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGAVAVPDPRLDKLAEVAKSAQII 65 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + H+V E++ Sbjct: 66 PTQLTFVDIAGLVKGASKGEGLGNQFLATIREVDAVAHVVRCFEDS 111 >gi|71400644|ref|XP_803116.1| GTP-binding protein [Trypanosoma cruzi strain CL Brener] gi|70865767|gb|EAN81670.1| GTP-binding protein, putative [Trypanosoma cruzi] Length = 404 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 18/104 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLG---IVKEGYK------------ 206 GIIGLPN GKST ++T ++ K ++PF T+ NL +V + + Sbjct: 74 GIIGLPNVGKSTLFNALTCSQQAKTGNFPFCTINANLARVPVVDDRLRRLAAFVGAQRIV 133 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 E LAD+ G+I+ A +GAG+G++FL +LLH+V E Sbjct: 134 DVEIDLADVAGLIEGASKGAGLGNKFLADIRPCTILLHMVRCFE 177 >gi|167044638|gb|ABZ09310.1| putative TGS domain protein [uncultured marine crenarchaeote HF4000_APKG7F19] Length = 403 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTT--------------LYPNLGIV------ 201 IG+IG N GK+TF S T + +I+ YPFTT ++P ++ Sbjct: 5 IGLIGKTNTGKTTFFNSSTLSSDEISTYPFTTKKSSTSIGYAITLCVHPEFNVIDNPNNS 64 Query: 202 --KEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 K+G++ L D+PG++K++ +G G+G++FL ++ LLH+V A Sbjct: 65 KCKDGWRYIPIELIDLPGLLKDSWKGKGLGNQFLSIASQSDALLHVVDA 113 >gi|161528488|ref|YP_001582314.1| translation-associated GTPase [Nitrosopumilus maritimus SCM1] gi|160339789|gb|ABX12876.1| GTPase of unknown function domain protein [Nitrosopumilus maritimus SCM1] Length = 403 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +G+IG N GK+TF S T + +I+ YPFTT P GI Sbjct: 5 LGLIGKTNTGKTTFFNSATLSSEEISSYPFTTKSPVSGIANAITLCVHPEFKIQDNPNNS 64 Query: 203 ---EGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 +G++ L D+PG+IK+A +G G+G++FL ++ LLH+V A Sbjct: 65 KCVDGWRYIPIELIDLPGLIKDAWKGKGLGNQFLSIAAQSDALLHVVDA 113 >gi|257387389|ref|YP_003177162.1| translation-associated GTPase [Halomicrobium mukohataei DSM 12286] gi|257169696|gb|ACV47455.1| GTP-binding conserved hypothetical protein TIGR00650 [Halomicrobium mukohataei DSM 12286] Length = 395 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 26/110 (23%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL----------------------YPNL 198 D+G++G P+ GKSTF + T YPFTT+ PNL Sbjct: 4 DVGLVGKPSVGKSTFFNAATMNDVPEGAYPFTTIDPSVGEAYVRVECAAPEFDHTCTPNL 63 Query: 199 GIVKEGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS 245 G ++G + F+ L D+ G++ AH+G G+G++FL VLLH+V Sbjct: 64 GYCEDGTR-FVPVRLVDVAGLVPGAHEGRGLGNQFLSDLNEADVLLHVVD 112 >gi|219121906|ref|XP_002181298.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407284|gb|EEC47221.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 363 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 22/107 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------- 202 I+GLPN GKST ++T + + A+YPF T+ PN+GIV Sbjct: 6 AIVGLPNVGKSTLFNALTETQGAEAANYPFCTIEPNVGIVSVPDPKLEILKDINKSVKVV 65 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ D+ G+IK A G G+G++FL + ++H+V E+ Sbjct: 66 PAALEFV--DVAGLIKGASTGEGLGNQFLASIRQCDAVVHVVRCFED 110 >gi|15966110|ref|NP_386463.1| translation-associated GTPase [Sinorhizobium meliloti 1021] gi|307305664|ref|ZP_07585411.1| GTP-binding protein YchF [Sinorhizobium meliloti BL225C] gi|307317667|ref|ZP_07597106.1| GTP-binding protein YchF [Sinorhizobium meliloti AK83] gi|15075380|emb|CAC46936.1| Putative GTP-dependent nucleic acid-binding protein EngD [Sinorhizobium meliloti 1021] gi|306896825|gb|EFN27572.1| GTP-binding protein YchF [Sinorhizobium meliloti AK83] gi|306902367|gb|EFN32963.1| GTP-binding protein YchF [Sinorhizobium meliloti BL225C] Length = 367 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAKSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAVVHVLRCFEDD 111 >gi|304311479|ref|YP_003811077.1| Predicted GTPase, probable translation factor [gamma proteobacterium HdN1] gi|301797212|emb|CBL45432.1| Predicted GTPase, probable translation factor [gamma proteobacterium HdN1] Length = 363 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 31/145 (21%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A ++PF T+ PN GIV Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENFPFCTIEPNTGIVPIPDARLDALAAIVKPQKVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 EF+ DI G++ A +G G+G++FL + T + H+V +++ +D L+ Sbjct: 66 TTMEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFDDDNVIHVAGKIDPLA 123 Query: 264 ---AYNSELRKKIEIVGLSQIDTVD 285 N+EL L+ +D+V+ Sbjct: 124 DIETINTEL-------ALADMDSVE 141 >gi|291533832|emb|CBL06945.1| Predicted GTPase [Megamonas hypermegale ART12/1] Length = 80 Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 38/73 (52%), Positives = 52/73 (71%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 M+F+D K+ +++GDGG G +FRREKFI GGP GG GGRG DV ++ N+NTL+DFR Sbjct: 1 MQFIDRTKIIVKAGDGGHGKSAFRREKFIPKGGPSGGDGGRGADVILKVDRNMNTLLDFR 60 Query: 61 YQQHFKAQHGEKG 73 Y + F ++G G Sbjct: 61 YHRKFVGKNGGNG 73 >gi|116073126|ref|ZP_01470388.1| hypothetical protein RS9916_31787 [Synechococcus sp. RS9916] gi|116068431|gb|EAU74183.1| hypothetical protein RS9916_31787 [Synechococcus sp. RS9916] Length = 363 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V A+ + A++PF T+ PN+G V KE I Sbjct: 5 GIVGLPNVGKSTLFNALVANAQAQAANFPFCTIEPNVGTVAVPDDRLQKLSDLSSSKETI 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A QG G+G++FL + ++H+V E++ Sbjct: 65 PTRMEFVDIAGLVKGASQGEGLGNKFLANIREVDAIVHVVRCFEDD 110 >gi|56695719|ref|YP_166070.1| GTP-dependent nucleic acid-binding protein EngD [Ruegeria pomeroyi DSS-3] gi|56677456|gb|AAV94122.1| GTP-binding protein YchF [Ruegeria pomeroyi DSS-3] Length = 365 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++TR A + A++PF T+ PN+G V K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVGVPDARLDKLAAIAKSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIREVDAIAHVLRCFED 110 >gi|86604757|ref|YP_473520.1| GTP-dependent nucleic acid-binding protein EngD [Synechococcus sp. JA-3-3Ab] gi|86553299|gb|ABC98257.1| GTP-binding protein YchF [Synechococcus sp. JA-3-3Ab] Length = 363 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 19/108 (17%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A AK + A++PF T+ PN+G V G + Sbjct: 5 GIVGLPNVGKSTLFNALCENAKAEAANFPFCTIEPNIGRVAVPDERLQVLAKISGSAAIV 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 A DI G++ A +G G+G++FL H + ++H+V +EN+ Sbjct: 65 PAQIEFVDIAGLVAGASKGEGLGNQFLSHIRQVDAIVHVVRCFKDENI 112 >gi|70995938|ref|XP_752724.1| GTP-binding protein [Aspergillus fumigatus Af293] gi|66850359|gb|EAL90686.1| GTP-binding protein [Aspergillus fumigatus Af293] gi|159131479|gb|EDP56592.1| GTP-binding protein [Aspergillus fumigatus A1163] Length = 456 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-----------------VKEG 204 IG++G P++GKST L S+T A K+ ++PFTT+ P I K Sbjct: 7 IGLVGKPSSGKSTTLNSLTDASSKVGNFPFTTIDPQRAIGYLQIECACKRFNVSDKCKPN 66 Query: 205 YKEFI---------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 Y + L D+ G++ AHQG G+G++FL L+H+V Sbjct: 67 YGSCVDGRRSVPIELLDVAGLVPGAHQGRGLGNKFLDDLRHADALIHVV 115 >gi|5531851|gb|AAD44500.1| homologous yeast-44.2 protein [Homo sapiens] Length = 396 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+ K AH G G+G+ FL H + H+ A E++ Sbjct: 85 PAFLNVVDIAGLAKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 130 >gi|226946189|ref|YP_002801262.1| GTP-dependent nucleic acid-binding protein EngD [Azotobacter vinelandii DJ] gi|226721116|gb|ACO80287.1| Conserved hypothetical GTP-binding protein [Azotobacter vinelandii DJ] Length = 366 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 21/109 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVKPERV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDD 110 >gi|86282735|gb|ABC91798.1| putative GTP-binding protein [Rhizobium etli CFN 42] Length = 431 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V KE I Sbjct: 70 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAKSKELI 129 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 130 PTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDS 175 >gi|170057480|ref|XP_001864501.1| developmentally-regulated GTP-binding protein 2 [Culex quinquefasciatus] gi|167876899|gb|EDS40282.1| developmentally-regulated GTP-binding protein 2 [Culex quinquefasciatus] Length = 363 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 54/93 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I +IG P+ GKST L+++T+ + + A+Y FTTL G+++ L D+PGII+ Sbjct: 62 ARIALIGFPSVGKSTLLSTLTKTESEAANYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ A + NV Sbjct: 122 AAQGKGRGRQVIAVARTADLVLMMLDATKPNVH 154 >gi|157131887|ref|XP_001662357.1| developmentally regulated GTP-binding protein 2 (drg 2) [Aedes aegypti] gi|108871364|gb|EAT35589.1| developmentally regulated GTP-binding protein 2 (drg 2) [Aedes aegypti] Length = 363 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 54/93 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I +IG P+ GKST L+++T+ + + A+Y FTTL G+++ L D+PGII+ Sbjct: 62 ARIALIGFPSVGKSTLLSTLTKTESEAANYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ A + NV Sbjct: 122 AAQGKGRGRQVIAVARTADLVLMMLDATKPNVH 154 >gi|19074369|ref|NP_585875.1| putative GTP-BINDING PROTEIN [Encephalitozoon cuniculi GB-M1] gi|19069011|emb|CAD25479.1| putative GTP-BINDING PROTEIN [Encephalitozoon cuniculi GB-M1] Length = 369 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 20/131 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV--KEGYKEFI---------- 209 +GI+GLPN GKST +TR +YPF T+ P+ G V ++ EF+ Sbjct: 19 MGIVGLPNVGKSTLFNFLTRNNVPAENYPFCTIDPSEGRVEIQDERIEFLAKKYSPQNVA 78 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 + DI G++K A G G+G+ FL + + H+V E+ A ++ +D + Sbjct: 79 RAYLSVTDIAGLVKGASAGVGLGNHFLDNIRNVDGIFHVVRCFEDTEVAHFEDGVDPIRD 138 Query: 262 LSAYNSELRKK 272 + N ELR K Sbjct: 139 IEIVNEELRLK 149 >gi|110634508|ref|YP_674716.1| translation-associated GTPase [Mesorhizobium sp. BNC1] gi|110285492|gb|ABG63551.1| GTP-binding protein YchF [Chelativorans sp. BNC1] Length = 367 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V KE + Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRLKKIAEIAASKETV 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAVVHVLRCFEDD 111 >gi|161505135|ref|YP_001572247.1| putative GTPase HflX [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866482|gb|ABX23105.1| hypothetical protein SARI_03269 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 426 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNQITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH+V A ++EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVVDAADVRVQENIEAV-NTVLEEIDAHEIPT--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D+ ++E + + S+ TG GIPQ+ + L +++ Sbjct: 313 --LMVMNKIDMLDNFEPRIDRDE---ENKPIRVWLSAQTGVGIPQLFQALTERL 361 >gi|28950108|emb|CAD70888.1| conserved hypothetical protein [Neurospora crassa] Length = 419 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 26/111 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-----------------VKEG 204 IG++G P+AGKS+ L S+T A K+ ++PFTT+ P I K Sbjct: 7 IGLVGKPSAGKSSTLNSLTDASSKVGNFPFTTIDPQRAIGYLQIDCACARYNVSERCKPN 66 Query: 205 YKEFI---------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 Y + L D+ G++ AH+G G+G++FL L+H+V A Sbjct: 67 YGSCVNGKRSVPIELLDVAGLVPGAHEGKGLGNKFLDDLRHADALIHVVDA 117 >gi|224003407|ref|XP_002291375.1| GTP binding protein [Thalassiosira pseudonana CCMP1335] gi|220973151|gb|EED91482.1| GTP binding protein [Thalassiosira pseudonana CCMP1335] Length = 363 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 23/110 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------- 202 I+GLPN GKST ++T + + A+YPF T+ PN GIV+ Sbjct: 6 AIVGLPNVGKSTLFNALTETQGAEAANYPFCTIEPNTGIVEVPDIRLEVLGKINNSVKVV 65 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 EF+ D+ G++K A G G+G++FL + ++H+V E ENV Sbjct: 66 PTTLEFV--DVAGLVKGASDGEGLGNQFLATIRQCDAIVHVVRCFEDENV 113 >gi|85716023|ref|ZP_01047000.1| hypothetical protein NB311A_14440 [Nitrobacter sp. Nb-311A] gi|85697221|gb|EAQ35102.1| hypothetical protein NB311A_14440 [Nitrobacter sp. Nb-311A] Length = 365 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLG--------------IVKEGY-- 205 GI+GLPN GKST ++T A + A+YPF T+ PN+G I K Sbjct: 6 GIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGAVAVPDPRLGRLAEIAKSAQII 65 Query: 206 -KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+++ A +G G+G++FL + + H+V E++ Sbjct: 66 PTQLTFVDIAGLVRGASKGEGLGNQFLANIREVDAVAHVVRCFEDS 111 >gi|148228515|ref|NP_001079680.1| obg-like ATPase 1 [Xenopus laevis] gi|82176404|sp|Q7ZWM6|OLA1_XENLA RecName: Full=Obg-like ATPase 1 gi|28422245|gb|AAH46937.1| Ola1 protein [Xenopus laevis] Length = 396 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 22/145 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFI---------- 209 IGI+GLPN GKSTF +T+++ ++PF T+ PN V + EF+ Sbjct: 25 IGIVGLPNIGKSTFFNVLTKSQAAAENFPFCTINPNESRVPVPDDRFEFLCEHHKPASKV 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILD 260 + DI G++K A G G+G+ FL H + H++ A +++ V+ + D Sbjct: 85 PAFLNVVDIAGLVKGASAGQGLGNAFLSHISACDGIFHLMRAFDDDDIIHVEGNVNPVRD 144 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVD 285 + ELR K E + ++ +D ++ Sbjct: 145 -IEIIREELRLKDEEMIIAALDKLE 168 >gi|87302112|ref|ZP_01084937.1| hypothetical protein WH5701_07924 [Synechococcus sp. WH 5701] gi|87283037|gb|EAQ74993.1| hypothetical protein WH5701_07924 [Synechococcus sp. WH 5701] Length = 363 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V A+ + A++PF T+ PN+G+V +E + Sbjct: 5 GIVGLPNVGKSTLFNALVANAQAQAANFPFCTIEPNVGVVAVPDPRLKMLSDVSSSREIV 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A QG G+G++FL + ++H+V E++ Sbjct: 65 PTRVEFVDIAGLVKGASQGEGLGNKFLANIREVDAIVHVVRCFEDD 110 >gi|332372854|gb|AEE61569.1| unknown [Dendroctonus ponderosae] Length = 399 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 22/149 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKEFI-- 209 +GI+G+PN GKSTF +T++ ++PF T+ PN V E +K Sbjct: 24 VGIVGVPNVGKSTFFNVLTKSSAPAENFPFCTIDPNESRVPVPDDRFDYLCEYFKPLSKV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILD 260 + DI G++K A +G G+G+ FL H + H+ A E++ V+ + D Sbjct: 84 PAFLNIVDIAGLVKGASEGQGLGNAFLSHISACDAIFHLCRAFEDDDVTHVEGEVNPVRD 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 L ELR K E + ++ ++ L Sbjct: 144 -LDIIAEELRLKDEDSLMKYLEKLERTVL 171 >gi|322826957|gb|EFZ31339.1| GTP-binding protein, putative [Trypanosoma cruzi] Length = 400 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 18/104 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLG---IVKEGYK------------ 206 GIIGLPN GKST ++T ++ K ++PF T+ NL +V + + Sbjct: 47 GIIGLPNVGKSTLFNALTCSQQAKTGNFPFCTINANLARVPVVDDRLRRLAAFVGAQRIV 106 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 E LAD+ G+I+ A +GAG+G++FL +LLH+V E Sbjct: 107 DVEIDLADVAGLIEGASKGAGLGNKFLADIRPCTILLHMVRCFE 150 >gi|303389694|ref|XP_003073079.1| putative GTP-binding protein [Encephalitozoon intestinalis ATCC 50506] gi|303302223|gb|ADM11719.1| putative GTP-binding protein [Encephalitozoon intestinalis ATCC 50506] Length = 369 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 26/160 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV--KEGYKEFI---------- 209 +GI+GLPN GKST +TR +YPF T+ P+ G V ++ +F+ Sbjct: 19 MGIVGLPNVGKSTLFNFLTRNNVPAENYPFCTIDPSEGRVEIQDERVDFLEKKYSPQNVV 78 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 + DI G++K A G G+G+ FL + + H+V E+ A ++ +D + Sbjct: 79 KAYLSITDIAGLVKGASTGVGLGNHFLDNIRSVDGIFHVVRCFEDTGVAHFEDGVDPI-- 136 Query: 265 YNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP 304 + IEIV ++ D +T+ R + +++ P Sbjct: 137 ------RDIEIVN-EELRLKDYETMVRHEEKMSKDLKSKP 169 >gi|294496518|ref|YP_003543011.1| nucleolar GTP-binding-1 domain protein [Methanohalophilus mahii DSM 5219] gi|292667517|gb|ADE37366.1| Nucleolar GTP-binding-1 domain protein [Methanohalophilus mahii DSM 5219] Length = 316 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 24/160 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+A+VT A+P++A YPFTT +G GY + + D PG++ Sbjct: 162 IVVAGYPNVGKSSFVAAVTDARPEVASYPFTTKGVTIGHFMRGYNRYQVIDTPGLL---- 217 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQI 281 DR + ++R V + ++AL + + A ILD E+ +++++ + Sbjct: 218 ------DRPM--SDRNEVEMQAITAL-KYLDAVVIFILDPSETCGYEISQQVKL-----L 263 Query: 282 DTVDSD------TLARKKNELATQCGQVPFEFSSITGHGI 315 D V ++ A K + +V E S+++G GI Sbjct: 264 DDVRNNFGLPVLVAANKLDLFENNTVKVDIEMSTLSGEGI 303 >gi|110681032|ref|YP_684039.1| GTP-dependent nucleic acid-binding protein EngD [Roseobacter denitrificans OCh 114] gi|109457148|gb|ABG33353.1| GTP-binding protein YchF [Roseobacter denitrificans OCh 114] Length = 365 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++TR A + A++PF T+ PN+G V K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLDKLADIAKSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIREVDSIAHVLRCFED 110 >gi|7643796|gb|AAF65513.1| GTP-binding protein [Capsicum annuum] Length = 394 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 23/137 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------------KEGY 205 IGI+GLPN GKST ++T+ ++PF T+ PN V K Sbjct: 27 IGIVGLPNVGKSTLFNTLTKLSIPAENFPFCTIEPNEARVHVPDERFEWLCQLYKPKSEV 86 Query: 206 KEFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 F+ + DI G+++ AH G G+G+ FL H + H++ A E+ +V + D Sbjct: 87 AAFLEIHDIAGLVRGAHAGQGLGNSFLSHIRAVDGIFHVLRAFEDPDIIHVDDTVDPVRD 146 Query: 261 ELSAYNSELR-KKIEIV 276 L + ELR K IE + Sbjct: 147 -LEVISEELRLKDIEFI 162 >gi|312379328|gb|EFR25639.1| hypothetical protein AND_08862 [Anopheles darlingi] Length = 363 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 54/93 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I +IG P+ GKST L+++T+ + + A+Y FTTL G+++ L D+PGII+ Sbjct: 62 ARIALIGFPSVGKSTLLSTLTKTESEAANYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ A + NV Sbjct: 122 AAQGKGRGRQVIAVARTADLVLMMLDATKPNVH 154 >gi|224586202|ref|YP_002640001.1| GTPase HflX [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224470730|gb|ACN48560.1| HflX protein, putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 426 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 87/174 (50%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNQITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H + L+ T + +LLH+V A ++EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAVFKATLQETRQATLLLHVVDAADVRVQENIEAV-NTVLEEIDAHEIPT--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++E + + S+ +G GIPQ+ + L +++ Sbjct: 313 --LMVMNKIDMLDDFEPRIDRDE---ENKPIRVWLSAQSGVGIPQLFQALTERL 361 >gi|320039095|gb|EFW21030.1| GTP-binding protein [Coccidioides posadasii str. Silveira] Length = 416 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L S+T A K+ ++PFTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNSLTDASSKVGNFPFTTIDPQRAIGYLQIDCACQRHNLTEKCKPN 66 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G EG + L D+ G++ AH+G G+G++FL L+H+V Sbjct: 67 YGSCHEGRRSVPIELLDVAGLVPGAHEGKGLGNKFLDDLRHADALIHVV 115 >gi|299134269|ref|ZP_07027462.1| GTP-binding protein YchF [Afipia sp. 1NLS2] gi|298591016|gb|EFI51218.1| GTP-binding protein YchF [Afipia sp. 1NLS2] Length = 365 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GLPN GKST ++T A + A+YPF T+ PN+G V E K Sbjct: 6 GIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGAVAVPDPRLDKLSEIAKSAQII 65 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + H+V E++ Sbjct: 66 PTQLTFVDIAGLVKGASKGEGLGNQFLATIREVDAVAHVVRCFEDS 111 >gi|254172324|ref|ZP_04879000.1| GTP-binding protein, Gtp1/obg family [Thermococcus sp. AM4] gi|214034220|gb|EEB75046.1| GTP-binding protein, Gtp1/obg family [Thermococcus sp. AM4] Length = 356 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 27/187 (14%) Query: 144 GILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE 203 +L + ++ L+L + I G PN GKST L ++T AKP++A YPFTT N+G +E Sbjct: 155 NVLKELPVVDLELPTVV---IAGHPNVGKSTLLRALTNAKPEVASYPFTTKGINVGQFEE 211 Query: 204 GYKEFILADIPGII------KNAHQGAGIGDRFLKHTERTHVLLHIVSALE------ENV 251 Y + + D PG++ +N + I LKH V+++I E E Sbjct: 212 HYLRYQVIDTPGLLDRPLSERNEVEKQAILA--LKHL--GDVIVYIFDPSEYCGFPIEEQ 267 Query: 252 QAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSIT 311 ++ IL+E + IV ++++D D + + E G P + S++T Sbjct: 268 MHLFEEILNEFGEFPF-------IVAINKVDIADEEK-TKAIEEFVKAKGLEPVKISALT 319 Query: 312 GHGIPQI 318 G G+ ++ Sbjct: 320 GEGLDEL 326 >gi|222479886|ref|YP_002566123.1| GTPase of unknown function domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222452788|gb|ACM57053.1| GTPase of unknown function domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 400 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 26/108 (24%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL----------------------YPNLG 199 IG++G P+ GKSTF + T YPFTT+ PN+G Sbjct: 5 IGLVGKPSVGKSTFFNAATMNDVPEGAYPFTTIDPTVGEAYVRVDCAAPEFDESCTPNVG 64 Query: 200 IVKEGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + ++G + F+ + D+ G++ AH+G G+G++FL T VL+H+V Sbjct: 65 VCRDGTR-FVPVKMVDVAGLVPGAHEGRGLGNQFLTDLNETDVLIHVV 111 >gi|163734585|ref|ZP_02142024.1| translation-associated GTPase [Roseobacter litoralis Och 149] gi|161392078|gb|EDQ16408.1| translation-associated GTPase [Roseobacter litoralis Och 149] Length = 365 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++TR A + A++PF T+ PN+G V K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDVRLDKLADIAKSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIREVDSIAHVLRCFED 110 >gi|256073441|ref|XP_002573039.1| GTP-binding protein-related [Schistosoma mansoni] gi|238658209|emb|CAZ29271.1| GTP-binding protein-related [Schistosoma mansoni] Length = 396 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 21/135 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI---------- 209 G++GLPN GKSTF +T+++ ++PF T+ PN + + E + Sbjct: 25 GVVGLPNVGKSTFFNILTKSQVPAENFPFCTINPNESRVAVPDERFDWLCEYHQPVSRVP 84 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---EL 262 + DI G++K AH+G G+G+ FL H + H++ E + +D +L Sbjct: 85 AYLNVVDIAGLVKGAHEGQGLGNAFLSHIRGVDAIFHMLRLFENEDITHIEGDIDPVRDL 144 Query: 263 SAYNSELR-KKIEIV 276 + ELR K IE V Sbjct: 145 DIIDEELRLKDIEYV 159 >gi|47229935|emb|CAG10349.1| unnamed protein product [Tetraodon nigroviridis] Length = 359 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 24/146 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IGI+GLPN GKSTF +T+++ ++PF T+ PN + + E Y +F+ Sbjct: 24 IGIVGLPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERY-DFLCKYHKPASK 82 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCIL 259 + DI G++K AH G G+G+ FL H + H+ + ++ +V+ + Sbjct: 83 VPAFLNVVDIAGLVKGAHSGQGLGNAFLSHINACDGIFHMTRSFDDEDIIHVEGNVDPVR 142 Query: 260 DELSAYNSELRKKIEIVGLSQIDTVD 285 D + + ELR K E + ID ++ Sbjct: 143 D-IEIIHEELRLKDEEMIAPIIDKLE 167 >gi|328876581|gb|EGG24944.1| hypothetical protein DFA_03189 [Dictyostelium fasciculatum] Length = 435 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 26/111 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------K 202 +G +G P+AGKS+FL + T + K+ +YPFTT+ PN G+ + Sbjct: 22 VGCVGKPSAGKSSFLNAATDSNAKVGNYPFTTIEPNYGVTYYPSVCPCAKYDKIDQCAPR 81 Query: 203 EG-------YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G Y + D+ G++ A +G G+G++FL VLLH+V Sbjct: 82 YGRCDKGVRYLPVKMLDVAGLVPGASEGKGLGNQFLDDLRHADVLLHVVDV 132 >gi|20093188|ref|NP_619263.1| translation-associated GTPase [Methanosarcina acetivorans C2A] gi|19918534|gb|AAM07743.1| GTP-binding protein [Methanosarcina acetivorans C2A] Length = 394 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 20/105 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------VKEGYKE------ 207 IG+ G PNAGKSTF + T A +IA+YPFTT+ N G+ KE K Sbjct: 5 IGLAGKPNAGKSTFFKAATLADVEIANYPFTTINANHGVTYVRAECPCKEKEKTCGKCVD 64 Query: 208 ------FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 + D+ G++ +A +G G+G+ FL + ++H+V A Sbjct: 65 GVRLVPIDIIDVAGLVPDACKGKGLGNTFLDELRQAQAIIHVVDA 109 >gi|218661880|ref|ZP_03517810.1| translation-associated GTPase [Rhizobium etli IE4771] Length = 206 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAKSKELI 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDS 111 >gi|119175565|ref|XP_001239985.1| hypothetical protein CIMG_09606 [Coccidioides immitis RS] Length = 416 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L S+T A K+ ++PFTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNSLTDASSKVGNFPFTTIDPQRAIGYLQIDCACQRHNLTEKCKPN 66 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G EG + L D+ G++ AH+G G+G++FL L+H+V Sbjct: 67 YGSCHEGRRSVPIELLDVAGLVPGAHEGKGLGNKFLDDLRHADALIHVV 115 >gi|284989611|ref|YP_003408165.1| GTP-binding protein YchF [Geodermatophilus obscurus DSM 43160] gi|284062856|gb|ADB73794.1| GTP-binding protein YchF [Geodermatophilus obscurus DSM 43160] Length = 357 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 17/100 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V K Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDPRLGRLAELFSSQKTI 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI GI++ A +G G+G++FL + + + ++ Sbjct: 65 PATVSFVDIAGIVRGASEGQGLGNKFLANIRESDAICQVI 104 >gi|170593209|ref|XP_001901357.1| GTP-binding protein W08E3.3 [Brugia malayi] gi|158591424|gb|EDP30037.1| GTP-binding protein W08E3.3, putative [Brugia malayi] Length = 401 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKEFI-- 209 +GI+G+PN GKSTF +T+++ + ++PF T+ PN V E YK Sbjct: 25 MGILGVPNVGKSTFFNVLTKSQAQAENFPFCTIDPNESRVPVNDNRFDWLVEHYKPLSKV 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++ A +G G+G+ FL H L H+ A +++ Sbjct: 85 PAFLNVVDIAGLVSGASEGLGLGNAFLSHVSACDALFHLCRAFDDD 130 >gi|332978015|gb|EGK14758.1| Spo0B-associated GTP-binding protein [Desmospora sp. 8437] Length = 79 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 41/78 (52%), Positives = 55/78 (70%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KV+++ GDGG G ++FRREK+ GGP GG GGRGGDV Q L TL+DFRY+ Sbjct: 2 FVDKVKVFVKGGDGGNGMVAFRREKYEPRGGPAGGDGGRGGDVVFQVDEGLRTLMDFRYR 61 Query: 63 QHFKAQHGEKGMKRNRSG 80 + FKA GE G +++ G Sbjct: 62 KQFKADRGEHGRSKSQHG 79 >gi|325831941|ref|ZP_08165038.1| GTP-binding protein YchF [Eggerthella sp. HGA1] gi|325486262|gb|EGC88714.1| GTP-binding protein YchF [Eggerthella sp. HGA1] Length = 354 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 21/102 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++T A+YPF T+ PN+G+V Sbjct: 5 IGIVGLPNVGKSTLFTALTNKGGLAANYPFATIEPNVGVVPVPDARLDALANIDHPTRIV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 EF+ DI G++ A QG G+G++FL + T + +V Sbjct: 65 PATIEFV--DIAGLVAGASQGEGLGNQFLANIRETDAICEVV 104 >gi|317488480|ref|ZP_07947031.1| GTP-binding protein YchF [Eggerthella sp. 1_3_56FAA] gi|316912412|gb|EFV33970.1| GTP-binding protein YchF [Eggerthella sp. 1_3_56FAA] Length = 354 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 21/102 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++T A+YPF T+ PN+G+V Sbjct: 5 IGIVGLPNVGKSTLFTALTNKGGLAANYPFATIEPNVGVVPVPDARLDALANIDHPTRIV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 EF+ DI G++ A QG G+G++FL + T + +V Sbjct: 65 PATIEFV--DIAGLVAGASQGEGLGNQFLANIRETDAICEVV 104 >gi|257790809|ref|YP_003181415.1| GTP-binding protein YchF [Eggerthella lenta DSM 2243] gi|257474706|gb|ACV55026.1| GTP-binding protein YchF [Eggerthella lenta DSM 2243] Length = 354 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 21/102 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++T A+YPF T+ PN+G+V Sbjct: 5 IGIVGLPNVGKSTLFTALTNKGGLAANYPFATIEPNVGVVPVPDARLDALANIDHPTRIV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 EF+ DI G++ A QG G+G++FL + T + +V Sbjct: 65 PATIEFV--DIAGLVAGASQGEGLGNQFLANIRETDAICEVV 104 >gi|156545814|ref|XP_001607760.1| PREDICTED: similar to GTP binding protein [Nasonia vitripennis] Length = 397 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 +GI+G+PN GKSTF +T+++ ++PF T+ PN V E +K Sbjct: 24 VGIVGIPNVGKSTFFNVLTKSQAAAENFPFCTIDPNENKVPVPDARFDYLCEYFKPASKV 83 Query: 207 -EFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 F+ + DI G++K A +G G+G+ FL H + H+ A E++ Sbjct: 84 PAFLNVVDIAGLVKGAAEGQGLGNAFLSHISACDAIFHLCRAFEDD 129 >gi|294011773|ref|YP_003545233.1| putative GTPase [Sphingobium japonicum UT26S] gi|292675103|dbj|BAI96621.1| putative GTPase [Sphingobium japonicum UT26S] Length = 366 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLG-----------IVKEG------ 204 GI+GLPN GKST ++T + + A+YPF T+ PN+G I K G Sbjct: 6 GIVGLPNVGKSTLFNALTETQAAQAANYPFCTIEPNVGQVAVPDQRLQTIAKIGGSAKII 65 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 ETQLAFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDD 111 >gi|158284956|ref|XP_308001.3| AGAP002185-PA [Anopheles gambiae str. PEST] gi|157020842|gb|EAA03774.4| AGAP002185-PA [Anopheles gambiae str. PEST] Length = 363 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 54/93 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I +IG P+ GKST L+++T+ + + A+Y FTTL G+++ L D+PGII+ Sbjct: 62 ARIALIGFPSVGKSTLLSTLTKTESEAANYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ A + NV Sbjct: 122 AAQGKGRGRQVIAVARTADLVLMMLDATKPNVH 154 >gi|169837623|ref|ZP_02870811.1| GTPase ObgE [candidate division TM7 single-cell isolate TM7a] Length = 82 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 43/69 (62%) Query: 49 ATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDL 108 A N+NTL+DF+ + FKAQ G KG +G GED+++ VPVGT V + + L+ DL Sbjct: 14 ADPNINTLVDFKSSKKFKAQDGTKGAAARSTGKSGEDLIIKVPVGTMVRDFETNKLLLDL 73 Query: 109 DQEGQRIIL 117 D +++I Sbjct: 74 DIPNEKVIF 82 >gi|71027925|ref|XP_763606.1| hypothetical protein [Theileria parva strain Muguga] gi|68350559|gb|EAN31323.1| GTP-binding protein, putative [Theileria parva] Length = 357 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 19/123 (15%) Query: 145 ILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV--- 201 ILG + +I K L +G++GLPN GKST +++ ++PF T+ P+ +V Sbjct: 7 ILGFKSLIVPKNNL--KLGLVGLPNVGKSTTFNLLSKQCVPAENFPFCTINPHEAVVSVP 64 Query: 202 --------------KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 KE + DI G+++ AH+G G+G+ FL H + +LH+V A Sbjct: 65 DDRFDHLCKVFTPKKEISATVTIFDIAGLVRGAHKGEGLGNAFLSHIDAVDGILHVVRAF 124 Query: 248 EEN 250 E++ Sbjct: 125 EDD 127 >gi|254566173|ref|XP_002490197.1| Putative protein of unknown function [Pichia pastoris GS115] gi|238029993|emb|CAY67916.1| Putative protein of unknown function [Pichia pastoris GS115] gi|328350595|emb|CCA36995.1| Uncharacterized GTP-binding protein MJ1332 [Pichia pastoris CBS 7435] Length = 412 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 26/111 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IGI+G P++GKST L S+T A K+ +PFTT+ PN Sbjct: 7 IGIVGKPSSGKSTTLNSLTDADAKVGAFPFTTIEPNRATGYLQVDCACSRFGKESLCKPN 66 Query: 198 LGIVKEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G K G + +L D+ G++ A QG G+G++FL ++ L+H+V Sbjct: 67 YGWCKNGRRFVPIMLLDVAGLVPGASQGLGLGNQFLDDLRQSDALIHVVDV 117 >gi|195158070|ref|XP_002019917.1| GL11955 [Drosophila persimilis] gi|194116508|gb|EDW38551.1| GL11955 [Drosophila persimilis] Length = 343 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 54/93 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T+ + + A+Y FTTL G+++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTMLSTLTKTESEAANYEFTTLTCIPGVIEYQGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ A + NV Sbjct: 122 AAQGKGRGRQVIAVARTADLVLMMLDATKPNVH 154 >gi|167395011|ref|XP_001741184.1| hypothetical protein [Entamoeba dispar SAW760] gi|165894311|gb|EDR22344.1| hypothetical protein, conserved [Entamoeba dispar SAW760] Length = 396 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 22/166 (13%) Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----- 202 +E++I +L +GI+GLPN GKST ++T+ + + +YPF T+ PN V Sbjct: 8 KERVILGRLTNHLRMGIVGLPNVGKSTLFNALTKCQVQAQNYPFCTIDPNQARVAVPDER 67 Query: 203 -----EGYK-------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE- 249 E YK + DI G++K A G G+G+ FL H + +V E+ Sbjct: 68 FDYLCEHYKPASKVAASLQVTDIAGLVKGAAAGEGLGNAFLSHISGVDGIYQVVRVFEDE 127 Query: 250 ---NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 +V+ I D N K EI+ ++++T+ L +K Sbjct: 128 DIVHVEGDINPIRDMEIILNELCLKDEEIIS-AKVETLTKQNLHKK 172 >gi|257064874|ref|YP_003144546.1| GTP-binding protein YchF [Slackia heliotrinireducens DSM 20476] gi|256792527|gb|ACV23197.1| GTP-binding protein YchF [Slackia heliotrinireducens DSM 20476] Length = 354 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 21/102 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKS+ ++T+ A+YPF T+ PN+G+V Sbjct: 5 IGIVGLPNVGKSSLFTALTKKTGLAANYPFATIDPNVGMVPVPDTRLEELAKIDHPAKII 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 EF+ DI G++ A QG G+G++FL + T + +V Sbjct: 65 PATVEFV--DIAGLVAGASQGEGLGNKFLANIRETDAICEVV 104 >gi|84490244|ref|YP_448476.1| translation-associated GTPase [Methanosphaera stadtmanae DSM 3091] gi|84373563|gb|ABC57833.1| predicted GTPase [Methanosphaera stadtmanae DSM 3091] Length = 396 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL----------------------YPNLG 199 I + G PN GKS+F S T ++ ++A+YPFTT+ P G Sbjct: 4 IAVTGKPNVGKSSFFNSATLSEAEVANYPFTTIDANAAIAYVTAKCPCSELDVSCNPRTG 63 Query: 200 IVKEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 ++G Y L D+ G++ AH+G G+G++FL + L+HI+ A Sbjct: 64 KCEDGIRYIPVELIDVAGLVPGAHEGKGLGNKFLDDLSQARALIHIIDA 112 >gi|14601219|ref|NP_147752.1| translation-associated GTPase [Aeropyrum pernix K1] gi|5104835|dbj|BAA80149.1| conserved hypothetical protein [Aeropyrum pernix K1] Length = 410 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 27/111 (24%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------------------- 200 +G++G N GKSTF A+ T KI + PF T+ PN+G+ Sbjct: 8 LGLVGKTNVGKSTFFAAATEVPVKIENRPFVTIEPNVGVGYARKRCAHVELGLPRCDPVN 67 Query: 201 --VKEGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 EG++ FI L D+ G++ AH+G G+G+RFL + LL +V A Sbjct: 68 SLCIEGWR-FIPVKLLDVAGLVPGAHRGRGLGNRFLDDVRKADALLLVVDA 117 >gi|328771132|gb|EGF81172.1| hypothetical protein BATDEDRAFT_36811 [Batrachochytrium dendrobatidis JAM81] Length = 401 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 27/155 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +G++GLPN GKS+ +T ++PF T+ PN + E Y +F+ Sbjct: 24 MGVVGLPNVGKSSLFNVLTSQSAPAENFPFCTIDPNEARCPVPDERY-DFLCSLWNPPST 82 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD--- 260 + DI G+IK A +GAG+G+ FL H + + H+V E+N + +D Sbjct: 83 QPAYLHVTDIAGLIKGASEGAGLGNAFLSHIQAVDGIFHVVRVFEDNDIVHVEENIDPIR 142 Query: 261 ELSAYNSELRKK-IEIVGLSQIDTVDSDTLARKKN 294 +L +EL KK +E V +Q+ ++ LA +K+ Sbjct: 143 DLEIITAELCKKDLEFVKKAQV----AEDLAVRKS 173 >gi|85001163|ref|XP_955300.1| GTP-binding protein [Theileria annulata strain Ankara] gi|65303446|emb|CAI75824.1| GTP-binding protein, putative [Theileria annulata] Length = 424 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +G++GLPN GKST +++ ++PF T+ P+ +V KE Sbjct: 25 LGLVGLPNVGKSTTFNLLSKQCVPAENFPFCTINPHEAVVSVPDDRFDHLCKVFAPKKEI 84 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+++ AH+G G+G+ FL H + +LH+V A E++ Sbjct: 85 SATVTIFDIAGLVRGAHKGEGLGNAFLSHIDAVDGILHVVRAFEDD 130 >gi|148554309|ref|YP_001261891.1| GTP-dependent nucleic acid-binding protein EngD [Sphingomonas wittichii RW1] gi|148499499|gb|ABQ67753.1| GTP-binding protein YchF [Sphingomonas wittichii RW1] Length = 366 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIV-----------------KEG 204 GI+GLPN GKST ++T A + A+YPF T+ PN+G V K Sbjct: 6 GIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNIGQVAVPDPRLYEIARIGGSAKII 65 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+++ A +G G+G++FL + ++H++ E+ Sbjct: 66 ETQLAFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFED 110 >gi|300024021|ref|YP_003756632.1| GTP-binding protein YchF [Hyphomicrobium denitrificans ATCC 51888] gi|299525842|gb|ADJ24311.1| GTP-binding protein YchF [Hyphomicrobium denitrificans ATCC 51888] Length = 365 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 18/100 (18%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN+G V G KE + Sbjct: 6 GIVGLPNVGKSTLFNALTQTAAAEAANYPFCTIEPNVGEVAVPDARLETLAKIAGSKEIL 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI G+++ A +G G+G++FL H + +++ Sbjct: 66 PTRLTFVDIAGLVRGASKGEGLGNKFLSHIREVDAVAYVL 105 >gi|182414910|ref|YP_001819976.1| GTP-binding protein YchF [Opitutus terrae PB90-1] gi|177842124|gb|ACB76376.1| GTP-binding protein YchF [Opitutus terrae PB90-1] Length = 367 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 22/107 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST ++TR+ K + A+YPF T+ PN+G+V Sbjct: 5 GIVGLPNVGKSTLFNALTRSRKAEAANYPFCTIDPNVGVVTVPDDRLEPLSKISKTSVTV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL + ++ +V E+ Sbjct: 65 PAAIEFV--DIAGLVAGASKGEGLGNQFLANIREVDAVVQVVRCFED 109 >gi|92118569|ref|YP_578298.1| GTP-dependent nucleic acid-binding protein EngD [Nitrobacter hamburgensis X14] gi|91801463|gb|ABE63838.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 365 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIV--------------KEGY-- 205 GI+GLPN GKST ++T A + A+YPF T+ PN+G V K Sbjct: 6 GIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGAVAVPDPRLDQLAAVAKSAQII 65 Query: 206 -KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+++ A +G G+G++FL + + H+V E++ Sbjct: 66 PTQLTFVDIAGLVRGASKGEGLGNQFLANIREVDAVAHVVRCFEDS 111 >gi|260950193|ref|XP_002619393.1| hypothetical protein CLUG_00552 [Clavispora lusitaniae ATCC 42720] gi|238846965|gb|EEQ36429.1| hypothetical protein CLUG_00552 [Clavispora lusitaniae ATCC 42720] Length = 510 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L ++T A K+ +PFTT+ PN Sbjct: 109 IGLVGKPSSGKSTTLNALTDANAKVGAFPFTTIDPNKATGYLEVPCACSRVSKQDQCKPN 168 Query: 198 LGIVKEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G ++G + L D+ G++ NAH G G+G++FL L+HIV Sbjct: 169 YGYCRDGTRGVPVTLLDVAGLVPNAHLGRGLGNKFLSDLTEADCLIHIV 217 >gi|113475013|ref|YP_721074.1| GTP-dependent nucleic acid-binding protein EngD [Trichodesmium erythraeum IMS101] gi|110166061|gb|ABG50601.1| GTP-binding protein YchF [Trichodesmium erythraeum IMS101] Length = 363 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 18/104 (17%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 GI+GLPN GKST F A V AK + A++PF T+ PN+G+V +LA Sbjct: 5 GIVGLPNVGKSTLFNALVANAKAEAANFPFCTIEPNVGVVAVPDNRLNVLAQISNSAQTV 64 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 DI G++K A +G G+G++FL + ++ +V + Sbjct: 65 PTRIEFVDIAGLVKGASKGEGLGNQFLSNIREVDAIVQVVRCFD 108 >gi|308162629|gb|EFO65014.1| Developmentally regulated GTP-binding protein 1 [Giardia lamblia P15] Length = 373 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G++G P+ GKST L +T AK ++A+Y FTTL G + L D+PGII+ Sbjct: 64 ARVGLVGFPSVGKSTLLTKLTSAKSEVAEYEFTTLTAIPGTFVHKNTKIQLVDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + T RT L+ IV +++ A + I EL + L K+ ++ + Sbjct: 124 AADGRGKGRQVIA-TARTSDLILIVLDATKSL-AMKRKIERELEGFGIRLNKRPPLIKVD 181 Query: 280 QID 282 + D Sbjct: 182 RKD 184 >gi|330954231|gb|EGH54491.1| GTPase CgtA [Pseudomonas syringae Cit 7] Length = 62 Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 37/61 (60%), Positives = 49/61 (80%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFR 60 MKF+DE + +++GDGG G +SFRREKFIE GGP+GG GG GG +++ A NLNTL+D+R Sbjct: 1 MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSIFMVADVNLNTLVDYR 60 Query: 61 Y 61 Y Sbjct: 61 Y 61 >gi|328873714|gb|EGG22081.1| GTP-binding protein [Dictyostelium fasciculatum] Length = 422 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 22/107 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKS+ ++T ++ A ++PF T+ PN+G+V Sbjct: 62 GIVGLPNIGKSSLFNALTSSQSAAAANFPFCTIDPNIGLVMVPDERLNHISKLLNTKSKV 121 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 E EF+ DI G++K A G G+G++FL + + +++H+V E+ Sbjct: 122 ETQLEFV--DIAGLVKGASDGEGLGNKFLANIRQVSLIVHLVRCFED 166 >gi|302335003|ref|YP_003800210.1| GTP-binding protein YchF [Olsenella uli DSM 7084] gi|301318843|gb|ADK67330.1| GTP-binding protein YchF [Olsenella uli DSM 7084] Length = 353 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 21/102 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V Sbjct: 5 IGIVGLPNVGKSTLFTALTKKGGLAANYPFATIDPNVGVVDVPDERLQRLAEMANPAKVV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 EF+ DI G++K A+ G G+G++FL + + +V Sbjct: 65 PATVEFV--DIAGLVKGANAGEGLGNQFLANIRNCDAICEVV 104 >gi|254503818|ref|ZP_05115969.1| GTP-binding protein YchF [Labrenzia alexandrii DFL-11] gi|222439889|gb|EEE46568.1| GTP-binding protein YchF [Labrenzia alexandrii DFL-11] Length = 366 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRLYAIRDIAQSKEVI 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + + H++ E++ Sbjct: 66 PTRITFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVLRCFEDD 111 >gi|163744221|ref|ZP_02151581.1| GTP-binding protein YchF [Oceanibulbus indolifex HEL-45] gi|161381039|gb|EDQ05448.1| GTP-binding protein YchF [Oceanibulbus indolifex HEL-45] Length = 365 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++TR A + A++PF T+ PN+G V K Sbjct: 5 MGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLDTLAEIAKSKSI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIREVDAIAHVLRCFED 110 >gi|317137151|ref|XP_003190028.1| hypothetical protein AOR_1_914194 [Aspergillus oryzae RIB40] Length = 415 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L S+T A K+ ++PFTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNSLTDATSKVGNFPFTTIDPQRAIGYLQIECACQRYGVSDKCRPN 66 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G EG + L D+ G++ AHQG G+G++FL L+H+V Sbjct: 67 YGGCIEGRRSVPIELLDVAGLVPGAHQGRGLGNKFLDDLRHADALIHVV 115 >gi|195112134|ref|XP_002000631.1| GI10336 [Drosophila mojavensis] gi|193917225|gb|EDW16092.1| GI10336 [Drosophila mojavensis] Length = 367 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 54/93 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T+ + + A+Y FTTL G+++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTMLSTLTKTESEAANYEFTTLTCIPGVIEYQGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ A + NV Sbjct: 122 AAQGKGRGRQVIAVARTADLVLMMLDATKPNVH 154 >gi|19264067|gb|AAH25144.1| Gtpbp5 protein [Mus musculus] Length = 231 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 91/163 (55%), Gaps = 4/163 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +V +R G GG+G F E EFGGPDGG GG GG + ++ + +L Q Sbjct: 71 FVDHRRVLVRGGSGGSGMSCFHSEPRKEFGGPDGGDGGNGGHIILRVDQQVKSLSSVLSQ 130 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++ GE G +N SG G + + VPVGT V E D I + DL G + A GG Sbjct: 131 --YQGFSGEDGGSKNCSGRGGATLYIQVPVGTLVKEGDKI--VADLSNLGDEYVAALGGA 186 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGII 165 GG GN F ++ N+AP PG GQE++++L+LK +A G++ Sbjct: 187 GGKGNRFFLANDNRAPVTCTPGQPGQERVLYLELKTMAHAGMV 229 >gi|55377182|ref|YP_135032.1| translation-associated GTPase [Haloarcula marismortui ATCC 43049] gi|55229907|gb|AAV45326.1| GTP-binding protein [Haloarcula marismortui ATCC 43049] Length = 393 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 22/107 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------------------V 201 I + G PNAGKSTF + T A + +YPFTT+ N G+ Sbjct: 4 IALAGKPNAGKSTFYKAATMADVDVGNYPFTTIDANRGVSHVRTDCPCLDREERCGDDNC 63 Query: 202 KEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 ++G Y L D+ G++ AH+G G+G++FL V+L++V A Sbjct: 64 RDGKRYVPVELIDVAGLVPGAHEGRGLGNQFLDELSTADVILNVVDA 110 >gi|126179523|ref|YP_001047488.1| translation-associated GTPase [Methanoculleus marisnigri JR1] gi|125862317|gb|ABN57506.1| GTP-binding conserved hypothetical protein TIGR00650 [Methanoculleus marisnigri JR1] Length = 389 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 22/106 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI------------------VKE 203 + I G PN GKSTF + T A+ +IA+YPFTT+ N G+ ++ Sbjct: 4 LAIAGKPNCGKSTFFRAATLAQAEIANYPFTTIDANHGVAYVRTACPCQEMHVPCENCRD 63 Query: 204 GYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G + FI L D+ G++ AH G G+G++FL + + +L +V A Sbjct: 64 GVR-FIPVGLIDVAGLVPEAHLGRGLGNQFLDNLRQADAILQVVDA 108 >gi|255936375|ref|XP_002559214.1| Pc13g07870 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583834|emb|CAP91856.1| Pc13g07870 [Penicillium chrysogenum Wisconsin 54-1255] Length = 403 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 23/142 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFI---------- 209 +G IGLPN GKS+ +T +YPF T+ PN +V + +F+ Sbjct: 25 MGCIGLPNVGKSSLFNLMTEQSAAAENYPFCTIEPNEARCVVPDPRYDFLCNVWNPPSKY 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILD 260 + DI G+IK A +GAG+G+ FL H + + H+V A + + V + + D Sbjct: 85 PAYLQVTDIAGLIKGASEGAGLGNAFLSHIQAVDGMYHVVRAFDNDEVLHVDDSVDPVRD 144 Query: 261 ELSAYNSELRKK-IEIVGLSQI 281 L SEL KK ++I+ +++ Sbjct: 145 -LDTIQSELCKKDLDILAKAKV 165 >gi|195054541|ref|XP_001994183.1| GH23383 [Drosophila grimshawi] gi|193896053|gb|EDV94919.1| GH23383 [Drosophila grimshawi] Length = 363 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 54/93 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T+ + + A+Y FTTL G+++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTMLSTLTKTESEAANYEFTTLTCIPGVIEYQGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ A + NV Sbjct: 122 AAQGKGRGRQVIAVARTADLVLMMLDATKPNVH 154 >gi|125778570|ref|XP_001360043.1| GA19430 [Drosophila pseudoobscura pseudoobscura] gi|54639793|gb|EAL29195.1| GA19430 [Drosophila pseudoobscura pseudoobscura] Length = 363 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 54/93 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T+ + + A+Y FTTL G+++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTMLSTLTKTESEAANYEFTTLTCIPGVIEYQGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ A + NV Sbjct: 122 AAQGKGRGRQVIAVARTADLVLMMLDATKPNVH 154 >gi|194899933|ref|XP_001979512.1| GG15886 [Drosophila erecta] gi|190651215|gb|EDV48470.1| GG15886 [Drosophila erecta] Length = 363 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 54/93 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T+ + + A+Y FTTL G+++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTMLSTLTKTESEAANYEFTTLTCIPGVIEYQGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ A + NV Sbjct: 122 AAQGKGRGRQVIAVARTADLVLMMLDATKPNVH 154 >gi|317125801|ref|YP_004099913.1| GTP-binding protein YchF [Intrasporangium calvum DSM 43043] gi|315589889|gb|ADU49186.1| GTP-binding protein YchF [Intrasporangium calvum DSM 43043] Length = 364 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGY-KEFIL 210 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V E + E IL Sbjct: 5 IGIVGLPNVGKSTLFNALTKNSVLAANYPFATIEPNIGVVPLPDERLATLAEIFGSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A G G+G++FL + + + +V ++ Sbjct: 65 PATVSFVDIAGLVRGASVGEGLGNKFLANIRESDAICQVVRVFTDD 110 >gi|212696202|ref|ZP_03304330.1| hypothetical protein ANHYDRO_00738 [Anaerococcus hydrogenalis DSM 7454] gi|212676831|gb|EEB36438.1| hypothetical protein ANHYDRO_00738 [Anaerococcus hydrogenalis DSM 7454] Length = 102 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/80 (47%), Positives = 57/80 (71%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 +D AK+ +++G GG G ++FRREK+ GGP GG GG G ++I+AT++L+TL +FRY+ Sbjct: 1 MIDNAKIELQAGKGGDGAVAFRREKYEPTGGPAGGDGGDGASIYIKATNSLSTLEEFRYK 60 Query: 63 QHFKAQHGEKGMKRNRSGAK 82 +KA +GE GM + R G K Sbjct: 61 TKYKASNGEDGMGKKRFGKK 80 >gi|145355168|ref|XP_001421839.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582078|gb|ABP00133.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 400 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 31/186 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-----------GIVKEGYKEFIL 210 +GI+G+PN GKST ++T ++PF T+ PN +V++ + ++ Sbjct: 26 VGIVGMPNVGKSTLYNALTNCAIPAENFPFCTIEPNSTRVNVPDARFDWLVEQNKPKSVV 85 Query: 211 A------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 A DI G++K A GAG+G+ FL H + + H++ E+ +V+ + D Sbjct: 86 APYLEIVDIAGLVKGASTGAGLGNSFLSHIKAVDGIAHVMRCFEDADVIHVEDRVDPV-D 144 Query: 261 ELSAYNSELRKK-IEIVGLSQIDTVDSDTLA-------RKKNELATQCGQVPF-EFSSIT 311 ++ SELR K +E + + T T A +K EL T C V + E Sbjct: 145 DIEIITSELRAKDLEFMSALKEKTEKEVTRAANAMAAKEQKQELETICKVVDWLESGKEV 204 Query: 312 GHGIPQ 317 HG+ Q Sbjct: 205 RHGMEQ 210 >gi|21356473|ref|NP_650822.1| CG6195 [Drosophila melanogaster] gi|195353604|ref|XP_002043294.1| GM26898 [Drosophila sechellia] gi|195569634|ref|XP_002102814.1| GD20106 [Drosophila simulans] gi|7300535|gb|AAF55688.1| CG6195 [Drosophila melanogaster] gi|18446897|gb|AAL68041.1| AT06125p [Drosophila melanogaster] gi|194127408|gb|EDW49451.1| GM26898 [Drosophila sechellia] gi|194198741|gb|EDX12317.1| GD20106 [Drosophila simulans] gi|220949542|gb|ACL87314.1| CG6195-PA [synthetic construct] gi|220958466|gb|ACL91776.1| CG6195-PA [synthetic construct] Length = 363 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 54/93 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T+ + + A+Y FTTL G+++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTMLSTLTKTESEAANYEFTTLTCIPGVIEYQGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ A + NV Sbjct: 122 AAQGKGRGRQVIAVARTADLVLMMLDATKPNVH 154 >gi|195497997|ref|XP_002096337.1| GE25118 [Drosophila yakuba] gi|194182438|gb|EDW96049.1| GE25118 [Drosophila yakuba] Length = 363 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 54/93 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T+ + + A+Y FTTL G+++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTMLSTLTKTESEAANYEFTTLTCIPGVIEYQGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ A + NV Sbjct: 122 AAQGKGRGRQVIAVARTADLVLMMLDATKPNVH 154 >gi|242018804|ref|XP_002429861.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212514890|gb|EEB17123.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 308 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 22/149 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 +GI+G+PN GKSTF +T++ ++PF T+ PN V + F Sbjct: 24 VGIVGIPNVGKSTFFNVLTKSSAAAENFPFCTIDPNENKVPVPDERFDFLCDYFKPLSKV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G++K A +G G+G+ FL H + + H++ A E+ +V+ + D Sbjct: 84 PAFLNVVDIAGLVKGAAEGQGLGNAFLSHIKACDAIFHLLRAFEDEDVTHVEGEVNPVRD 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 L ELR K E Q++ ++ L Sbjct: 144 -LEIIAEELRLKDEEYLNQQLEKLERTVL 171 >gi|150397466|ref|YP_001327933.1| GTP-dependent nucleic acid-binding protein EngD [Sinorhizobium medicae WSM419] gi|150028981|gb|ABR61098.1| GTP-binding protein YchF [Sinorhizobium medicae WSM419] Length = 367 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRRLADIAKSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+++ A +G G+G++FL + ++H++ E+ Sbjct: 66 PTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAVVHVLRCFED 110 >gi|159110528|ref|XP_001705519.1| Developmentally regulated GTP-binding protein 1 [Giardia lamblia ATCC 50803] gi|157433605|gb|EDO77845.1| Developmentally regulated GTP-binding protein 1 [Giardia lamblia ATCC 50803] Length = 373 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G++G P+ GKST L +T AK ++A+Y FTTL G + L D+PGII+ Sbjct: 64 ARVGLVGFPSVGKSTLLTKLTSAKSEVAEYEFTTLTAIPGTFVHKNTKIQLVDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + T RT L+ IV +++ A + I EL + L K+ ++ + Sbjct: 124 AADGRGKGRQVIA-TARTSDLILIVLDATKSL-AMKRKIERELEGFGIRLNKRPPLIKVD 181 Query: 280 QID 282 + D Sbjct: 182 RKD 184 >gi|26251065|ref|NP_757105.1| putative GTPase HflX [Escherichia coli CFT073] gi|91213722|ref|YP_543708.1| putative GTPase HflX [Escherichia coli UTI89] gi|110644530|ref|YP_672260.1| putative GTPase HflX [Escherichia coli 536] gi|170766941|ref|ZP_02901394.1| GTP-binding protein HflX [Escherichia albertii TW07627] gi|191174526|ref|ZP_03036024.1| GTP-binding protein HflX [Escherichia coli F11] gi|215489517|ref|YP_002331948.1| putative GTPase HflX [Escherichia coli O127:H6 str. E2348/69] gi|218561332|ref|YP_002394245.1| GTPase HflX [Escherichia coli S88] gi|218692507|ref|YP_002400719.1| putative GTPase HflX [Escherichia coli ED1a] gi|227886784|ref|ZP_04004589.1| GTPase HflX [Escherichia coli 83972] gi|237703840|ref|ZP_04534321.1| GTP-binding protein hflX [Escherichia sp. 3_2_53FAA] gi|300987262|ref|ZP_07178091.1| GTP-binding protein HflX [Escherichia coli MS 45-1] gi|300988650|ref|ZP_07178790.1| GTP-binding protein HflX [Escherichia coli MS 200-1] gi|301045955|ref|ZP_07193139.1| GTP-binding protein HflX [Escherichia coli MS 185-1] gi|306815612|ref|ZP_07449761.1| putative GTPase HflX [Escherichia coli NC101] gi|331650298|ref|ZP_08351370.1| GTP-binding protein HflX [Escherichia coli M605] gi|331660748|ref|ZP_08361680.1| GTP-binding protein HflX [Escherichia coli TA206] gi|26111497|gb|AAN83679.1|AE016771_190 GTP-binding protein hflX [Escherichia coli CFT073] gi|91075296|gb|ABE10177.1| GTP-binding protein HflX [Escherichia coli UTI89] gi|110346122|gb|ABG72359.1| GTP-binding protein HflX [Escherichia coli 536] gi|170124379|gb|EDS93310.1| GTP-binding protein HflX [Escherichia albertii TW07627] gi|190905206|gb|EDV64847.1| GTP-binding protein HflX [Escherichia coli F11] gi|215267589|emb|CAS12044.1| predicted GTPase [Escherichia coli O127:H6 str. E2348/69] gi|218368101|emb|CAR05908.1| putative GTPase [Escherichia coli S88] gi|218430071|emb|CAR10916.1| putative GTPase [Escherichia coli ED1a] gi|222035943|emb|CAP78688.1| GTP-binding protein hflX [Escherichia coli LF82] gi|226901752|gb|EEH88011.1| GTP-binding protein hflX [Escherichia sp. 3_2_53FAA] gi|227836357|gb|EEJ46823.1| GTPase HflX [Escherichia coli 83972] gi|281181269|dbj|BAI57599.1| hypothetical phage protein [Escherichia coli SE15] gi|294491581|gb|ADE90337.1| GTP-binding protein HflX [Escherichia coli IHE3034] gi|300302038|gb|EFJ58423.1| GTP-binding protein HflX [Escherichia coli MS 185-1] gi|300305883|gb|EFJ60403.1| GTP-binding protein HflX [Escherichia coli MS 200-1] gi|300407739|gb|EFJ91277.1| GTP-binding protein HflX [Escherichia coli MS 45-1] gi|305851274|gb|EFM51729.1| putative GTPase HflX [Escherichia coli NC101] gi|307556340|gb|ADN49115.1| GTP-binding protein HflX [Escherichia coli ABU 83972] gi|307629244|gb|ADN73548.1| putative GTPase HflX [Escherichia coli UM146] gi|312948822|gb|ADR29649.1| putative GTPase HflX [Escherichia coli O83:H1 str. NRG 857C] gi|315288454|gb|EFU47852.1| GTP-binding protein HflX [Escherichia coli MS 110-3] gi|315293545|gb|EFU52897.1| GTP-binding protein HflX [Escherichia coli MS 153-1] gi|315299054|gb|EFU58308.1| GTP-binding protein HflX [Escherichia coli MS 16-3] gi|323189948|gb|EFZ75226.1| GTP-binding proten HflX [Escherichia coli RN587/1] gi|323950758|gb|EGB46636.1| GTP-binding protein HflX [Escherichia coli H252] gi|323955460|gb|EGB51224.1| GTP-binding protein HflX [Escherichia coli H263] gi|324013815|gb|EGB83034.1| GTP-binding protein HflX [Escherichia coli MS 60-1] gi|330908515|gb|EGH37034.1| GTP-binding protein HflX [Escherichia coli AA86] gi|331040692|gb|EGI12850.1| GTP-binding protein HflX [Escherichia coli M605] gi|331051790|gb|EGI23829.1| GTP-binding protein HflX [Escherichia coli TA206] Length = 426 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A ++EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV-NTVLEEIDAHEIP---- 311 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++E + + S+ TG GIPQ+ + L +++ Sbjct: 312 -TLLVMNKIDMLDDFEPRIDRDE---ENKPIRVWLSAQTGAGIPQLFQALTERL 361 >gi|154294871|ref|XP_001547874.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10] gi|150844516|gb|EDN19709.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10] Length = 440 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-----------------VKEG 204 IG++G P++GKST L S+T A K+ ++PFTT+ P I K Sbjct: 7 IGLVGKPSSGKSTTLNSLTDATSKVGNFPFTTIDPQRAIGYLQIDCACARYNLQSRCKPN 66 Query: 205 YKEFI---------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 Y I L D+ G++ AH+G G+G++FL L+H+V Sbjct: 67 YGSCIDGRRSVPIELLDVAGLVPGAHEGKGLGNKFLDDLRHADALIHVV 115 >gi|322831157|ref|YP_004211184.1| GTP-binding proten HflX [Rahnella sp. Y9602] gi|321166358|gb|ADW72057.1| GTP-binding proten HflX [Rahnella sp. Y9602] Length = 434 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 13/173 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I + ++G NAGKST +T+A +A+ F TL P L I+ E +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNRITQADVYVANQLFATLDPTLRRIIVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKI 273 ++ H L+ T + +LLH++ A + VQ A +L E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQASLLLHVIDAADIRVQENIDAVNTVLAEIEADEIP----- 311 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D +NE + V S++TG GIP + + L +++ Sbjct: 312 ALLVMNKIDMLDDFVPRIDRNE---ENLPVRVWLSAVTGEGIPLLFQALTERL 361 >gi|284165248|ref|YP_003403527.1| hypothetical protein Htur_1970 [Haloterrigena turkmenica DSM 5511] gi|284014903|gb|ADB60854.1| GTPase of unknown function domain protein [Haloterrigena turkmenica DSM 5511] Length = 392 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 22/107 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------------------V 201 I + G PNAGKSTF + T A +A+YPFTT+ N G+ Sbjct: 4 IALAGKPNAGKSTFYTAATMADVDVANYPFTTIDANRGVSYARTDCPCLEREERCNADNC 63 Query: 202 KEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 ++G Y L D+ G++ AH+G G+G++FL V+++++ A Sbjct: 64 EDGKRYVPIELIDVAGLVPGAHEGKGLGNQFLDELTNADVIVNVIDA 110 >gi|194741306|ref|XP_001953130.1| GF17362 [Drosophila ananassae] gi|190626189|gb|EDV41713.1| GF17362 [Drosophila ananassae] Length = 363 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 54/93 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T+ + + A+Y FTTL G+++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTMLSTLTKTESEAANYEFTTLTCIPGVIEYQGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ A + NV Sbjct: 122 AAQGKGRGRQVIAVARTADLVLMMLDATKPNVH 154 >gi|195450168|ref|XP_002072394.1| GK22817 [Drosophila willistoni] gi|194168479|gb|EDW83380.1| GK22817 [Drosophila willistoni] Length = 363 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 54/93 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T+ + + A+Y FTTL G+++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTMLSTLTKTESEAANYEFTTLTCIPGVIEYQGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ A + NV Sbjct: 122 AAQGKGRGRQVIAVARTADLVLMMLDATKPNVH 154 >gi|195395754|ref|XP_002056499.1| GJ10190 [Drosophila virilis] gi|194143208|gb|EDW59611.1| GJ10190 [Drosophila virilis] Length = 363 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 54/93 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T+ + + A+Y FTTL G+++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTMLSTLTKTESEAANYEFTTLTCIPGVIEYQGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ A + NV Sbjct: 122 AAQGKGRGRQVIAVARTADLVLMMLDATKPNVH 154 >gi|253741915|gb|EES98773.1| Developmentally regulated GTP-binding protein 1 [Giardia intestinalis ATCC 50581] Length = 373 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G++G P+ GKST L +T AK ++A+Y FTTL G + L D+PGII+ Sbjct: 64 ARVGLVGFPSVGKSTLLTKLTSAKSEVAEYEFTTLTAIPGTFVHKNTKIQLVDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + T RT L+ IV +++ A + I EL + L K+ ++ + Sbjct: 124 AADGRGKGRQVIA-TARTSDLILIVLDATKSL-AMKRKIERELEGFGIRLNKRPPLIRVD 181 Query: 280 QID 282 + D Sbjct: 182 RKD 184 >gi|330844441|ref|XP_003294134.1| hypothetical protein DICPUDRAFT_42964 [Dictyostelium purpureum] gi|325075459|gb|EGC29344.1| hypothetical protein DICPUDRAFT_42964 [Dictyostelium purpureum] Length = 377 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 22/108 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIV------------------K 202 +GI+GLPN GKST ++T + +A ++PF T+ PN+G V K Sbjct: 16 VGIVGLPNIGKSTLFNALTSSNAAMAANFPFCTIDPNVGKVFVPDERLDLISDLLKTKSK 75 Query: 203 EGYK-EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 G + EF+ DI G++K A G G+G++FL + + +++H+V E+ Sbjct: 76 VGTQLEFV--DIAGLVKGASDGEGLGNKFLGNIRQVSLIVHLVRCFED 121 >gi|315617586|gb|EFU98192.1| GTP-binding proten HflX [Escherichia coli 3431] Length = 426 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A ++EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV-NTVLEEIDAHEIP---- 311 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++E + + S+ TG GIPQ+ + L +++ Sbjct: 312 -TLLVMNKIDMLDDFEPRIDRDE---ENKPIRVWLSAQTGAGIPQLFQALTERL 361 >gi|213410353|ref|XP_002175946.1| GTP binding protein [Schizosaccharomyces japonicus yFS275] gi|212003993|gb|EEB09653.1| GTP binding protein [Schizosaccharomyces japonicus yFS275] Length = 392 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 33/183 (18%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTLYP----------NLGIVKEGYKE-- 207 GI+G+PN GKSTF ++T++ P A+YP+ T+ P + E YK Sbjct: 24 GIVGMPNVGKSTFFQAITKSVLGNP--ANYPYATIEPEEAKVAVPDERFDYLTELYKPVR 81 Query: 208 -----FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQ 252 + DI G+ K AH GAG+G+ FL + + +V A ++ N Sbjct: 82 IVPAFLTVIDIAGLTKGAHTGAGLGNSFLSNVRAVDAIFQMVRAFDDAEIVHVEGDVNPV 141 Query: 253 AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITG 312 IL+EL ++E K + GL +I + ++TL K + + E ++T Sbjct: 142 RDLSIILEELLIKDAEFVTK-HLEGLKKITSRGANTLEMKMKKEEQATTERVLEHLTVTK 200 Query: 313 HGI 315 I Sbjct: 201 QPI 203 >gi|193084031|gb|ACF09705.1| GTPase of unknown function-like protein [uncultured marine crenarchaeote AD1000-202-A2] Length = 202 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLY----------------------PNLG 199 IG+IG N GK+TF S T + +I+ YPFTT PN Sbjct: 5 IGLIGKTNTGKTTFFNSSTLSTNEISTYPFTTKKSSTSVGHAITLCVHKEFNVQDNPNNS 64 Query: 200 IVKEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 +G++ L D+PG+IK+A +G G+G++FL ++ LLH+V A Sbjct: 65 RCSDGWRYIPIELIDLPGLIKDAWKGKGLGNQFLSIAAQSDALLHVVDA 113 >gi|82701726|ref|YP_411292.1| translation-associated GTPase [Nitrosospira multiformis ATCC 25196] gi|82409791|gb|ABB73900.1| GTP-binding protein, HSR1-related protein [Nitrosospira multiformis ATCC 25196] Length = 367 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VKE 203 GI+GLPN GKST ++T+A +YPF T+ PN+GI V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDSRLTELAAIVKPQKVQS 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL T ++++V + + Sbjct: 66 AVVEFV--DIAGLVAGASKGEGLGNKFLATIRETDGIINMVRCFKND 110 >gi|302807698|ref|XP_002985543.1| hypothetical protein SELMODRAFT_234816 [Selaginella moellendorffii] gi|302810671|ref|XP_002987026.1| hypothetical protein SELMODRAFT_158442 [Selaginella moellendorffii] gi|300145191|gb|EFJ11869.1| hypothetical protein SELMODRAFT_158442 [Selaginella moellendorffii] gi|300146749|gb|EFJ13417.1| hypothetical protein SELMODRAFT_234816 [Selaginella moellendorffii] Length = 389 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 22/132 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IGI+GLPN GKST ++T+ ++PF T+ PN + + E Y + Sbjct: 30 IGIVGLPNVGKSTLFNTLTKLSIPAENFPFCTIEPNEARVSVPDERYNWLVQHHKPKSEV 89 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+++ A++G G+G+ FL H + H++ A ++ +V+ + I D Sbjct: 90 SAFLEVHDIAGLVRGANEGQGLGNNFLSHIRAVDGIFHVIRAFDDVDVIHVEDSVDPIRD 149 Query: 261 ELSAYNSELRKK 272 L ELR K Sbjct: 150 -LDIITLELRLK 160 >gi|290995514|ref|XP_002680340.1| predicted protein [Naegleria gruberi] gi|284093960|gb|EFC47596.1| predicted protein [Naegleria gruberi] Length = 340 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 28/111 (25%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-------------------- 201 IGIIG P+AGKST L +++ A K DYPFTT+ PN GI Sbjct: 1 IGIIGKPSAGKSTLLNAISDANAKTGDYPFTTIEPNNGIALYRSSIPCPCAEYGLQKYCS 60 Query: 202 -KEG-------YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 K G Y + D+ G+I A G G+G++FL VL+H++ Sbjct: 61 PKYGKCVNSVRYIPISVMDVAGLIPGASLGKGLGNKFLDDLRHAQVLIHVL 111 >gi|260431156|ref|ZP_05785127.1| GTP-binding protein YchF [Silicibacter lacuscaerulensis ITI-1157] gi|260414984|gb|EEX08243.1| GTP-binding protein YchF [Silicibacter lacuscaerulensis ITI-1157] Length = 365 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G V K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGDVAVPDARLDKLAAIAKSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIREVDAIAHVLRCFED 110 >gi|148675362|gb|EDL07309.1| GTP binding protein 5, isoform CRA_b [Mus musculus] Length = 276 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 91/163 (55%), Gaps = 4/163 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D +V +R G GG+G F E EFGGPDGG GG GG + ++ + +L Q Sbjct: 116 FVDHRRVLVRGGSGGSGMSCFHSEPRKEFGGPDGGDGGNGGHIILRVDQQVKSLSSVLSQ 175 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGN 122 ++ GE G +N SG G + + VPVGT V E D I + DL G + A GG Sbjct: 176 --YQGFSGEDGGSKNCSGRGGATLYIQVPVGTLVKEGDKI--VADLSNLGDEYVAALGGA 231 Query: 123 GGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGII 165 GG GN F ++ N+AP PG GQE++++L+LK +A G++ Sbjct: 232 GGKGNRFFLANDNRAPVTCTPGQPGQERVLYLELKTMAHAGMV 274 >gi|329765329|ref|ZP_08256909.1| translation-associated GTPase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138235|gb|EGG42491.1| translation-associated GTPase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 403 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +G+IG N GK+TF + T + +I+ YPFTT P GI Sbjct: 5 LGLIGKTNTGKTTFYNAATLSSEEISSYPFTTKKPVSGIAHAITLCVHPEFKIQDNPNNS 64 Query: 203 ---EGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 EG++ L D+PG+IK+A +G G+G++FL ++ LLH+V A Sbjct: 65 KCVEGWRYIPVELIDLPGLIKDAWKGKGLGNQFLSIAAQSDALLHVVDA 113 >gi|146283517|ref|YP_001173670.1| GTP-dependent nucleic acid-binding protein EngD [Pseudomonas stutzeri A1501] gi|145571722|gb|ABP80828.1| GTP-binding protein YchF [Pseudomonas stutzeri A1501] Length = 366 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 21/109 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVKPERV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+++ A +G G+G++FL + T + H+V +++ Sbjct: 64 IPTTMEFV--DIAGLVEGASKGEGLGNKFLANIRETDAIAHVVRCFQDD 110 >gi|315230745|ref|YP_004071181.1| RBG1-like GTP-binding protein [Thermococcus barophilus MP] gi|315183773|gb|ADT83958.1| RBG1-like GTP-binding protein [Thermococcus barophilus MP] Length = 387 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 1/113 (0%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I + GLPN GKS+ L +T +ADYPFTT+ P G++K + L ++PG+++ Sbjct: 82 AQIVLAGLPNVGKSSLLRRLTGVDTDVADYPFTTVEPIPGMMKHNDVQIQLVEVPGLVEG 141 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G+G + L R + IV L ++ + IL E ++ K+ Sbjct: 142 ASLGKGMGTQLLAVI-RNADAIAIVIDLSQDPIRQMEIILKEFERAGIKINKR 193 >gi|157147858|ref|YP_001455177.1| putative GTPase HflX [Citrobacter koseri ATCC BAA-895] gi|157085063|gb|ABV14741.1| hypothetical protein CKO_03662 [Citrobacter koseri ATCC BAA-895] Length = 426 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 13/173 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNQITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKI 273 ++ H L+ T + +LLH+V A + VQ A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVVDAADVRVQENIDAVDTVLEEIDAHEIPT---- 312 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++E + + S+ TG GIPQ+ + L +++ Sbjct: 313 -LMVMNKIDMLDDFEPRIDRDE---ENKPIRVWLSAQTGIGIPQLFQALTERL 361 >gi|302905278|ref|XP_003049235.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256730170|gb|EEU43522.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 401 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 20/131 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN----------------LGIVKEGY 205 +G +GLPN GKS+ +T +YPF T+ PN L Y Sbjct: 25 MGCVGLPNVGKSSLFNLLTEQSAAAENYPFCTIEPNEARCAVPDARYDFLCDLWKPPSMY 84 Query: 206 KEFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 F+ + DI G+IK A QG G+G+ FL H + + HIV A + + +D + Sbjct: 85 PAFLQVTDIAGLIKGASQGEGLGNAFLSHIQAVDGMFHIVRAFDNDQVLHVDDSIDPVRD 144 Query: 262 LSAYNSELRKK 272 L+ SEL KK Sbjct: 145 LNTIQSELCKK 155 >gi|325983636|ref|YP_004296038.1| GTP-binding protein YchF [Nitrosomonas sp. AL212] gi|325533155|gb|ADZ27876.1| GTP-binding protein YchF [Nitrosomonas sp. AL212] Length = 363 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------------VKE 203 GI+GLPN GKST ++T+A +YPF T+ PN+GI V+ Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENYPFCTIDPNVGIVEVPDPRLQKLSDIVKPQKVQP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T ++++V ++ Sbjct: 66 AIVEFV--DIAGLVAGASKGEGLGNKFLANIRETDGIVNMVRCFSDD 110 >gi|238489139|ref|XP_002375807.1| GTP-binding protein [Aspergillus flavus NRRL3357] gi|220698195|gb|EED54535.1| GTP-binding protein [Aspergillus flavus NRRL3357] Length = 446 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L S+T A K+ ++PFTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNSLTDATSKVGNFPFTTIDPQRAIGYLQIECACQRYGVSDKCRPN 66 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G EG + L D+ G++ AHQG G+G++FL L+H+V Sbjct: 67 YGGCIEGRRSVPIELLDVAGLVPGAHQGRGLGNKFLDDLRHADALIHVV 115 >gi|254787720|ref|YP_003075149.1| GTP-dependent nucleic acid-binding protein EngD [Teredinibacter turnerae T7901] gi|237685487|gb|ACR12751.1| GTP-binding protein YchF [Teredinibacter turnerae T7901] Length = 363 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 17/106 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------KEGYKEFI----- 209 + GI+GLPN GKST ++T+A ++PF T+ PN G+V ++ E + Sbjct: 4 NCGIVGLPNVGKSTLFNALTQAGIDAQNFPFCTIEPNAGVVAVPDPRQDKLAEIVKPERI 63 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++ A +G G+G++FL + T + H+V ++ Sbjct: 64 VPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFDD 109 >gi|209966681|ref|YP_002299596.1| GTP-binding protein YchF [Rhodospirillum centenum SW] gi|209960147|gb|ACJ00784.1| GTP-binding protein YchF [Rhodospirillum centenum SW] Length = 365 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 18/107 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKST ++T A + A+YPF T+ PN+G V K Sbjct: 4 NCGIVGLPNVGKSTLFNALTSTAAAEAANYPFCTIEPNVGRVGVPDPRLDRLAVIAKSAK 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+++ A +G G+G++FL + ++H++ E+ Sbjct: 64 TVPTQLEFVDIAGLVRGASRGEGLGNQFLANIREVDAIVHVLRCFED 110 >gi|37904746|gb|AAP57208.1| developmentally regulated GTP-binding protein 2 [Danio rerio] Length = 364 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 54/93 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T+ + + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTKTESEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + V++ ++ A + +VQ Sbjct: 123 AAQGKGRGRQVIAVARTADVVIMMLDATKGDVQ 155 >gi|311693595|gb|ADP96468.1| translation-associated GTPase [marine bacterium HP15] Length = 363 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 21/108 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T++ ++PF T+ PN G+V Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIGAENFPFCTIEPNAGVVAMPDPRLNKLAEIVKPERV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G++ A +G G+G++FL + +T + H+V E+ Sbjct: 64 VPTTMEFV--DIAGLVAGASKGEGLGNQFLANIRQTDAIAHVVRCFED 109 >gi|288932809|ref|YP_003436869.1| small GTP-binding protein [Ferroglobus placidus DSM 10642] gi|288895057|gb|ADC66594.1| small GTP-binding protein [Ferroglobus placidus DSM 10642] Length = 354 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 46/72 (63%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L ++T AK ++ADY FTTL P G+++ + + D+PG+I+ Sbjct: 61 ATVVLVGYPSVGKSTLLNALTGAKSEVADYAFTTLKPTPGMLEYKGAKIQIIDVPGVIEG 120 Query: 220 AHQGAGIGDRFL 231 A QG G G L Sbjct: 121 ASQGRGRGREIL 132 >gi|257388853|ref|YP_003178626.1| translation-associated GTPase [Halomicrobium mukohataei DSM 12286] gi|257171160|gb|ACV48919.1| GTP-binding conserved hypothetical protein TIGR00650 [Halomicrobium mukohataei DSM 12286] Length = 392 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 22/107 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------------------V 201 + + G PNAGKSTF + T ++ + +YPFTT+ N G+ Sbjct: 4 VALAGKPNAGKSTFYTAATESEVDVGNYPFTTIDANRGVSYVRTDCPCLDRAERCGDEHC 63 Query: 202 KEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 ++G Y L D+ G++ AH+G G+G++FL V+L++V A Sbjct: 64 RDGKRYVPVELLDVAGLVPGAHEGRGLGNQFLDELTNADVILNVVDA 110 >gi|84043672|ref|XP_951626.1| GTP binding protein [Trypanosoma brucei TREU927] gi|33348556|gb|AAQ15881.1| GTP binding protein, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] gi|62359197|gb|AAX79641.1| GTP binding protein, putative [Trypanosoma brucei] Length = 367 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 18/104 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYK--------------- 206 GIIGLPN GKST ++T ++ K ++PF T+ NL V Sbjct: 14 GIIGLPNVGKSTLFNALTCSQQAKTGNFPFCTIDANLARVPVADDRLRRLATFSGAHKIV 73 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 E LAD+ G+I+ A +GAG+G++FL +LLH+V E Sbjct: 74 DVEIDLADVAGLIEGASKGAGLGNKFLSDIRPCTILLHMVRCFE 117 >gi|12859193|dbj|BAB31566.1| unnamed protein product [Mus musculus] Length = 270 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH G G+G+ FL H + ++ A E++ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFYLTRAFEDD 130 >gi|58039605|ref|YP_191569.1| GTP-dependent nucleic acid-binding protein EngD [Gluconobacter oxydans 621H] gi|58002019|gb|AAW60913.1| GTP-binding protein [Gluconobacter oxydans 621H] Length = 364 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 18/108 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKST ++T A + A+YPF T+ PN G V + Sbjct: 4 NCGIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNTGRVAVPDPRLDELARIGKSIR 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 64 KVPTSLEFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDD 111 >gi|315122334|ref|YP_004062823.1| translation-associated GTPase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495736|gb|ADR52335.1| translation-associated GTPase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 367 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 19/108 (17%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++TR A + A+YPF T+ PN G V K+ + Sbjct: 6 GIVGLPNVGKSTLFNALTRTATAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAKSKDLV 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI GI++ A +G G+G++FL + ++H++ +EN+ Sbjct: 66 PTSMSFIDIAGIVRGASKGEGLGNQFLANIREVDAIIHVLRCFDDENI 113 >gi|254585829|ref|XP_002498482.1| ZYRO0G11330p [Zygosaccharomyces rouxii] gi|238941376|emb|CAR29549.1| ZYRO0G11330p [Zygosaccharomyces rouxii] Length = 370 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 2/124 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+ L VT K +IA Y FTTL G+++ E + D+PGII Sbjct: 66 ARVVLIGYPSVGKSSLLGKVTTTKSEIAHYAFTTLTSVPGVLRYQGAEIQVVDLPGIIYG 125 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A QG G G + + +++ I+ A + Q A + EL A L K+ + Sbjct: 126 ASQGKGRGRQVVATARTADLVVMILDATKSEHQRA--SLEKELEAVGIRLNKEKPNISFK 183 Query: 280 QIDT 283 + DT Sbjct: 184 KKDT 187 >gi|154339988|ref|XP_001565951.1| GTP binding protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134063269|emb|CAM45474.1| putative GTP binding protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 372 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 GI+GLPN GKST ++T ++ K ++PF T++ N + ++ E ++ Sbjct: 15 GIVGLPNVGKSTLFNALTCSQIAKTGNFPFCTIHANTSRVPVIDERLRQLARFTGAEKIM 74 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 L D+ G+I A +GAG+G++FL VLLH+V E + Sbjct: 75 DVEVDLTDVAGLIAGASKGAGLGNKFLADIRTCAVLLHMVRCFESS 120 >gi|295665987|ref|XP_002793544.1| GTP-binding protein [Paracoccidioides brasiliensis Pb01] gi|226277838|gb|EEH33404.1| GTP-binding protein [Paracoccidioides brasiliensis Pb01] Length = 424 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L S+T A K+ ++PFTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNSLTDASSKVGNFPFTTIDPQRAIGYLQVDCACKRYNLSDICKPN 66 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G EG + L D+ G++ AH+G G+G++FL L+H+V Sbjct: 67 YGGCHEGRRSVPIELLDVAGLVPGAHEGKGLGNKFLDDLRHADALIHVV 115 >gi|67484586|ref|XP_657513.1| GTP-binding protein [Entamoeba histolytica HM-1:IMSS] gi|56474766|gb|EAL52123.1| GTP-binding protein, putative [Entamoeba histolytica HM-1:IMSS] Length = 396 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 27/149 (18%) Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----- 202 +E++I +L +GI+GLPN GKST ++T+ + + +YPF T+ PN V Sbjct: 8 KERVILGRLTNHLRMGIVGLPNVGKSTLFNALTKCQVQAQNYPFCTIDPNQARVAVPDER 67 Query: 203 -----EGYK-------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE- 249 E YK + DI G++K A G G+G+ FL H + +V E+ Sbjct: 68 FDYLCEHYKPASKVAASLQVTDIAGLVKGAAAGEGLGNAFLSHISGVDGIYQVVRVFEDE 127 Query: 250 ---------NVQAAYQCILDELSAYNSEL 269 N + IL+EL + E+ Sbjct: 128 DIVHVEGDINPVRDMEIILNELCLKDEEI 156 >gi|331005802|ref|ZP_08329160.1| GTP-binding and nucleic acid-binding protein YchF [gamma proteobacterium IMCC1989] gi|330420383|gb|EGG94691.1| GTP-binding and nucleic acid-binding protein YchF [gamma proteobacterium IMCC1989] Length = 363 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 18/109 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 + GI+GLPN GKST ++T+A ++PF T+ PN G+V K Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAGIGAENFPFCTIEPNAGVVAVPDLRLDKLSAIVNPQKT 63 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI G++ A +G G+G++FL + T + H+V +ENV Sbjct: 64 IATTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFDDENV 112 >gi|117626520|ref|YP_859843.1| putative GTPase HflX [Escherichia coli APEC O1] gi|115515644|gb|ABJ03719.1| HflX protein, GTP-binding subunit of protease specific for phage lambda cII repressor [Escherichia coli APEC O1] Length = 403 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 174 VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 233 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A ++EN++A +L+E+ A+ Sbjct: 234 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV-NTVLEEIDAHEIP---- 288 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++E + + S+ TG GIPQ+ + L +++ Sbjct: 289 -TLLVMNKIDMLDDFEPRIDRDE---ENKPIRVWLSAQTGAGIPQLFQALTERL 338 >gi|47086759|ref|NP_997803.1| developmentally-regulated GTP-binding protein 2 [Danio rerio] gi|37681783|gb|AAQ97769.1| developmentally regulated GTP binding protein 2 [Danio rerio] gi|50927138|gb|AAH79512.1| Drg2 protein [Danio rerio] Length = 364 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 54/93 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T+ + + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTKTESEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + V++ ++ A + +VQ Sbjct: 123 AAQGKGRGRQVIAVARTADVVIMMLDATKGDVQ 155 >gi|254470562|ref|ZP_05083966.1| GTP-binding protein YchF [Pseudovibrio sp. JE062] gi|211960873|gb|EEA96069.1| GTP-binding protein YchF [Pseudovibrio sp. JE062] Length = 366 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGDVAVPDPRQSKIAAIAQSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + + H++ E + Sbjct: 66 PTRLTFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVLRCFEND 111 >gi|225873673|ref|YP_002755132.1| GTP-binding protein YchF [Acidobacterium capsulatum ATCC 51196] gi|225792893|gb|ACO32983.1| GTP-binding protein YchF [Acidobacterium capsulatum ATCC 51196] Length = 365 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 21/108 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T AK + A+YPF T+ PN+G+V Sbjct: 4 NCGIVGLPNVGKSTIFNALTAAKAQAANYPFCTIDPNVGVVTVPDERLDKISAICKTKRT 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EFI DI G++ A +G G+G++FL H T ++H+V ++ Sbjct: 64 VPTTMEFI--DIAGLVAGASKGEGLGNQFLGHIRSTDAVVHVVRCFDD 109 >gi|169806040|ref|XP_001827765.1| GTP-binding protein [Enterocytozoon bieneusi H348] gi|161779051|gb|EDQ31077.1| GTP-binding protein [Enterocytozoon bieneusi H348] Length = 371 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 22/132 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK----- 206 IG++GLPN GKST ++T ++ + ++ F T P++G++K E YK Sbjct: 26 IGLVGLPNVGKSTLFNALTNSQVRAENFAFCTKDPHVGVLKVDDKRLVFLSEIYKPKRTI 85 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 L DI G++K + G G+G++FL+H R + + E+ +V+ A + D Sbjct: 86 PATLTLIDIAGLVKGSSDGVGLGNQFLEHIRRVDGIFLVTRCFEDAEITHVEGAVDPLRD 145 Query: 261 ELSAYNSELRKK 272 + SELR K Sbjct: 146 -IDIIKSELRLK 156 >gi|323698986|ref|ZP_08110898.1| GTP-binding protein YchF [Desulfovibrio sp. ND132] gi|323458918|gb|EGB14783.1| GTP-binding protein YchF [Desulfovibrio desulfuricans ND132] Length = 365 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 18/107 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK-EGYKEFILA-------- 211 IGI+GLPN GKST ++T+A+ + A+Y F T+ PN +V + +LA Sbjct: 5 IGIVGLPNVGKSTLFNALTKAQNAESANYAFCTIEPNKAVVPVPDIRLDVLAGLVNPQRV 64 Query: 212 --------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A +G G+G++FL + T +LH+V +++ Sbjct: 65 VNSTVDFVDIAGLVAGASKGEGLGNKFLANIRETQAILHVVRCFDDD 111 >gi|261326533|emb|CBH09494.1| GTP binding protein, putative [Trypanosoma brucei gambiense DAL972] Length = 367 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 18/104 (17%) Query: 163 GIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYK--------------- 206 GIIGLPN GKST ++T + K ++PF T+ NL V Sbjct: 14 GIIGLPNVGKSTLFNALTCNQQAKTGNFPFCTIDANLARVPVADDRLRRLATFSGAHKIV 73 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 E LAD+ G+I+ A +GAG+G++FL +LLH+V E Sbjct: 74 DVEIDLADVAGLIEGASKGAGLGNKFLSDIRPCTILLHMVRCFE 117 >gi|39937414|ref|NP_949690.1| GTP-dependent nucleic acid-binding protein EngD [Rhodopseudomonas palustris CGA009] gi|192293197|ref|YP_001993802.1| GTP-dependent nucleic acid-binding protein EngD [Rhodopseudomonas palustris TIE-1] gi|39651273|emb|CAE29795.1| putative GTP-binding protein [Rhodopseudomonas palustris CGA009] gi|192286946|gb|ACF03327.1| GTP-binding protein YchF [Rhodopseudomonas palustris TIE-1] Length = 365 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLG-----------IVKEGYKEFIL 210 GI+GLPN GKST ++T A + A+YPF T+ PN+G + + G + I+ Sbjct: 6 GIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGEVAVPDPRLDKLAEVGKSQQII 65 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++K A +G G+G++FL + H+V E+ Sbjct: 66 PTRLTFVDIAGLVKGASKGEGLGNQFLATIREVDAIAHVVRCFED 110 >gi|290562539|gb|ADD38665.1| GTP-binding protein CG1354 [Lepeophtheirus salmonis] Length = 398 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 21/131 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLG--IVKEGYKEFIL--------- 210 GI+GLPN GKSTF +T+ + A+ +PF T+ PN V + +F++ Sbjct: 26 GIVGLPNVGKSTFFNVLTKTQIAAAENFPFCTIDPNESRVPVPDARFDFLVDFHKPASKV 85 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 DI G++K A +G G+G+ FL H + LLH+ E+ + +D + Sbjct: 86 PAFLNVTDIAGLVKGASEGQGLGNAFLSHIKACDALLHLCRTFEDKEITHIEGEVDPVRD 145 Query: 262 LSAYNSELRKK 272 L N ELR K Sbjct: 146 LDIINEELRLK 156 >gi|301117530|ref|XP_002906493.1| GTPase, putative [Phytophthora infestans T30-4] gi|262107842|gb|EEY65894.1| GTPase, putative [Phytophthora infestans T30-4] Length = 390 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 17/104 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKE---- 207 IGI+G+PN GKSTF +++ ++PF T+ PN +V E Y+ Sbjct: 25 IGIVGVPNVGKSTFFNCLSKLHIPAENFPFCTIDPNDAVVPLPDQRFNWLVEKYQPTSVV 84 Query: 208 ---FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G+++ A GAG+G+ FL H + + H+V A + Sbjct: 85 PPVISITDIAGLVRGAADGAGLGNAFLSHIQAVDAIYHMVRAFD 128 >gi|259415679|ref|ZP_05739600.1| GTP-binding protein YchF [Silicibacter sp. TrichCH4B] gi|259348909|gb|EEW60671.1| GTP-binding protein YchF [Silicibacter sp. TrichCH4B] Length = 365 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------EGYKE------- 207 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G V E E Sbjct: 5 MGIVGLPNVGKSTLFNALTKTASAQAANFPFCTIEPNVGEVGVPDARLEKLAEIAQSKQI 64 Query: 208 ----FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++K A +G G+G++FL + + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIREVDAIAHVLRCFED 110 >gi|195044987|ref|XP_001991915.1| GH11803 [Drosophila grimshawi] gi|193901673|gb|EDW00540.1| GH11803 [Drosophila grimshawi] Length = 397 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 22/146 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+G+PN GKSTF +T + ++PF T+ PN V + F Sbjct: 24 IGIVGVPNVGKSTFFNVLTESAAPAENFPFCTIKPNESRVPVPDQRFDYLVEFHKPASVV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G++K A +G G+G+ FL H + H+ A E+ +V+ + D Sbjct: 84 PAYLNVVDIAGLVKGAAEGQGLGNDFLSHISACDSIFHLCRAFEDPDVTHVEGEVDPVRD 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDS 286 L ELR K E L +D ++ Sbjct: 144 -LEIIAEELRLKDEEKLLQCLDKLEK 168 >gi|323308938|gb|EGA62169.1| Rbg2p [Saccharomyces cerevisiae FostersO] Length = 368 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 51/95 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+ L +T K +IA Y FTTL G++K E + D+PGII Sbjct: 64 ARVVLIGYPSVGKSSLLGKITTTKSEIAHYAFTTLTSVPGVLKXQGAEIQIVDLPGIIYG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A QG G G + + ++L ++ A + Q A Sbjct: 124 ASQGKGRGRQVVATARTADLVLMVLDATKSEHQRA 158 >gi|21227184|ref|NP_633106.1| translation-associated GTPase [Methanosarcina mazei Go1] gi|20905522|gb|AAM30778.1| GTP-binding protein [Methanosarcina mazei Go1] Length = 394 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 20/105 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------VKEGYKE------ 207 IG+ G PNAGKSTF + T A +IA+YPFTT+ N G+ KE K Sbjct: 5 IGLAGKPNAGKSTFFKAATLADVEIANYPFTTINANHGVTYVRAECPCKEKGKTCGKCVD 64 Query: 208 ------FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 + D+ G++ +A +G G+G+ FL + ++H+V A Sbjct: 65 GVRLVPIDIIDVAGLVPDACKGRGLGNTFLDELRQAQAIIHVVDA 109 >gi|327289760|ref|XP_003229592.1| PREDICTED: developmentally-regulated GTP-binding protein 2-like [Anolis carolinensis] Length = 364 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 53/95 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A QG G G + + + V++ ++ A + VQ A Sbjct: 123 AAQGKGRGRQVIAVARTSDVVIMMLDATKGEVQRA 157 >gi|315425817|dbj|BAJ47471.1| translation-associated GTPase [Candidatus Caldiarchaeum subterraneum] gi|315427699|dbj|BAJ49295.1| translation-associated GTPase [Candidatus Caldiarchaeum subterraneum] Length = 402 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 37/144 (25%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------VKEGYKEFI 209 GI+G PN GKST ++++ +IA+YPFTT N+G+ +K+ + I Sbjct: 5 GIVGKPNVGKSTLFSALSMVNVEIANYPFTTKKTNVGVTYVRVECVCKKLGIKDNPRNSI 64 Query: 210 -----------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV----SALEENVQAA 254 + D PGII+ AH+G G+G +FL + +L+ + + L + AA Sbjct: 65 CIEGVRLVPIQIIDCPGIIREAHKGKGLGLKFLDEIRQASLLIIVADVSGATLADGTPAA 124 Query: 255 ---------YQCILDELSAYNSEL 269 + +LDE A+ +E+ Sbjct: 125 PFTHDPVEDVEMVLDEFDAWLAEI 148 >gi|86751266|ref|YP_487762.1| GTP-dependent nucleic acid-binding protein EngD [Rhodopseudomonas palustris HaA2] gi|86574294|gb|ABD08851.1| GTP-binding protein [Rhodopseudomonas palustris HaA2] Length = 365 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLG-----------IVKEGYKEFIL 210 GI+GLPN GKST ++T A + A+YPF T+ PN+G + + G + I+ Sbjct: 6 GIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGEVAVPDPRLDKLAEVGKSQQII 65 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++K A +G G+G++FL + H+V E+ Sbjct: 66 PTRLTFVDIAGLVKGASKGEGLGNQFLATIREVDAIAHVVRCFED 110 >gi|91978460|ref|YP_571119.1| GTP-dependent nucleic acid-binding protein EngD [Rhodopseudomonas palustris BisB5] gi|91684916|gb|ABE41218.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 365 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLG-----------IVKEGYKEFIL 210 GI+GLPN GKST ++T A + A+YPF T+ PN+G + + G + I+ Sbjct: 6 GIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGEVAVPDPRLDKLAEVGKSQQII 65 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++K A +G G+G++FL + H+V E+ Sbjct: 66 PTRLTFVDIAGLVKGASKGEGLGNQFLATIREVDAIAHVVRCFED 110 >gi|316935873|ref|YP_004110855.1| GTP-binding protein YchF [Rhodopseudomonas palustris DX-1] gi|315603587|gb|ADU46122.1| GTP-binding protein YchF [Rhodopseudomonas palustris DX-1] Length = 365 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLG-----------IVKEGYKEFIL 210 GI+GLPN GKST ++T A + A+YPF T+ PN+G + + G + I+ Sbjct: 6 GIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGEVAVPDPRLDKLAEVGKSQQII 65 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++K A +G G+G++FL + H+V E+ Sbjct: 66 PTRLTFVDIAGLVKGASKGEGLGNQFLATIREVDAIAHVVRCFED 110 >gi|237833673|ref|XP_002366134.1| GTP-binding protein, putative [Toxoplasma gondii ME49] gi|211963798|gb|EEA98993.1| GTP-binding protein, putative [Toxoplasma gondii ME49] gi|221508127|gb|EEE33714.1| GTP-binding protein, putative [Toxoplasma gondii VEG] Length = 451 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGI----------------VKEG 204 IG +G P+AGKSTF + T + K+ ++PFTT+ PN GI Sbjct: 8 IGCVGKPSAGKSTFFNAATEGSNAKVGNFPFTTINPNEGIGFFLTDCPCTNNPECQCSPR 67 Query: 205 Y------KEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 Y + F+ L D+ G+I AH+G G+G++FL VL+H++ Sbjct: 68 YGRCLNGRRFVPVKLLDVAGLIPGAHEGRGLGNKFLDDLRHADVLMHVI 116 >gi|332970242|gb|EGK09235.1| GTP-dependent nucleic acid-binding protein EngD [Psychrobacter sp. 1501(2011)] Length = 363 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 26/130 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A ++PF T PN+GIV Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNVGIVPVPDPRLQKLAAIVNPERVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCIL 259 EF+ DI G++ A +G G+G++FL + T + H+V +++ V I Sbjct: 66 TTMEFV--DIAGLVAGASKGEGMGNQFLANIRETDAIAHVVRCFDDDNVIHVDGRVSPI- 122 Query: 260 DELSAYNSEL 269 D++ N+EL Sbjct: 123 DDIETINTEL 132 >gi|298675730|ref|YP_003727480.1| GTPase [Methanohalobium evestigatum Z-7303] gi|298288718|gb|ADI74684.1| GTPase of unknown function domain protein [Methanohalobium evestigatum Z-7303] Length = 393 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 22/106 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------E 203 IG+ G PN+GKSTF S T A IA+YPFTT+ N G+ E Sbjct: 5 IGLAGKPNSGKSTFFKSATMADVDIANYPFTTISANHGVTYVRTECPCMKLNQRCGNCVE 64 Query: 204 GYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G + F+ + D+ G++ +A +G G+G+ FL + ++H++ A Sbjct: 65 GIR-FVPVEVIDVAGLVPDAWKGRGLGNAFLDELRQAKAIIHVIDA 109 >gi|221486342|gb|EEE24603.1| GTP-binding protein, putative [Toxoplasma gondii GT1] Length = 451 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGI----------------VKEG 204 IG +G P+AGKSTF + T + K+ ++PFTT+ PN GI Sbjct: 8 IGCVGKPSAGKSTFFNAATEGSNAKVGNFPFTTINPNEGIGFFLTDCPCTNNPECQCSPR 67 Query: 205 Y------KEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 Y + F+ L D+ G+I AH+G G+G++FL VL+H++ Sbjct: 68 YGRCLNGRRFVPVKLLDVAGLIPGAHEGRGLGNKFLDDLRHADVLMHVI 116 >gi|50417534|gb|AAH77496.1| Ola1 protein [Xenopus laevis] Length = 281 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 22/145 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFI---------- 209 IGI+GLPN GKSTF +T+++ ++PF T+ PN V + EF+ Sbjct: 25 IGIVGLPNIGKSTFFNVLTKSQAAAENFPFCTINPNESRVPVPDDRFEFLCEHHKPASKV 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILD 260 + DI G++K A G G+G+ FL H + H++ A +++ V+ + D Sbjct: 85 PAFLNVVDIAGLVKGASAGQGLGNAFLSHISACDGIFHLMRAFDDDDIIHVEGNVNPVRD 144 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVD 285 + ELR K E + ++ +D ++ Sbjct: 145 -IEIIREELRLKDEEMIIAALDKLE 168 >gi|319950225|ref|ZP_08024152.1| GTP-binding protein YchF [Dietzia cinnamea P4] gi|319436129|gb|EFV91322.1| GTP-binding protein YchF [Dietzia cinnamea P4] Length = 359 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGY-KEFIL 210 +GI+GLPN GKST ++T A+YPF T+ PN+G+V E + E IL Sbjct: 5 LGIVGLPNVGKSTLFNALTNNDVLAANYPFATIEPNVGVVDLPDPRLDRLAEIFGSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI GI+K A G G+G++FL + + +V ++ Sbjct: 65 PAVVSFVDIAGIVKGASTGEGMGNKFLANIREADAICQVVRVFDD 109 >gi|325096638|gb|EGC49948.1| GTP-binding protein [Ajellomyces capsulatus H88] Length = 416 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L S+T A K+ ++PFTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNSLTDASSKVGNFPFTTIDPQRAIGYLQVDCACKRFNVSDKCKPN 66 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G EG + L D+ G++ AH+G G+G++FL L+H+V Sbjct: 67 YGGCHEGRRSVPIELLDVAGLVPGAHEGRGLGNKFLDDLRHADALVHVV 115 >gi|321475880|gb|EFX86841.1| hypothetical protein DAPPUDRAFT_187388 [Daphnia pulex] Length = 364 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 54/93 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T+ + + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTLLSTLTKTQSEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ A + +VQ Sbjct: 123 ASQGKGRGKQVIAVARTADLVLMMLDATKGDVQ 155 >gi|78184272|ref|YP_376707.1| GTP-dependent nucleic acid-binding protein EngD [Synechococcus sp. CC9902] gi|78168566|gb|ABB25663.1| conserved hypothetical protein [Synechococcus sp. CC9902] Length = 363 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST F A V A+ + A++PF T+ PN+G V Sbjct: 5 GIVGLPNVGKSTLFNALVANAQAQAANFPFCTIEPNVGTVSVPDDRLQLLTDLSKSQNTV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QG G+G++FL + ++H+V E++ Sbjct: 65 PTRMEFV--DIAGLVKGASQGEGLGNKFLSNIREVDAIVHVVRCFEDD 110 >gi|307292922|ref|ZP_07572768.1| GTP-binding protein YchF [Sphingobium chlorophenolicum L-1] gi|306880988|gb|EFN12204.1| GTP-binding protein YchF [Sphingobium chlorophenolicum L-1] Length = 366 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLG-----------IVKEGYKEFIL 210 GI+GLPN GKST ++T + + A+YPF T+ PN G I K G I+ Sbjct: 6 GIVGLPNVGKSTLFNALTETQAAQAANYPFCTIEPNEGRVAVPDDRLQTIAKIGGSAKII 65 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+++ A +G G+G++FL + T ++H++ E+ Sbjct: 66 ETQLSFVDIAGLVRGASKGEGLGNQFLANIRETDAIVHVLRCFED 110 >gi|332188703|ref|ZP_08390417.1| GTP-binding and nucleic acid-binding protein YchF [Sphingomonas sp. S17] gi|332011267|gb|EGI53358.1| GTP-binding and nucleic acid-binding protein YchF [Sphingomonas sp. S17] Length = 366 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIV-----------------KEG 204 GI+GLPN GKST ++T A + A+YPF T+ PN+G V K Sbjct: 6 GIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGNVAVPDPRLYQLAEVAGSAKII 65 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+++ A +G G+G++FL + ++H++ E+ Sbjct: 66 ETQLAFVDIAGLVRGASKGEGLGNQFLGNIREVDAIVHVLRCFED 110 >gi|93006350|ref|YP_580787.1| translation-associated GTPase [Psychrobacter cryohalolentis K5] gi|92394028|gb|ABE75303.1| conserved hypothetical protein [Psychrobacter cryohalolentis K5] Length = 363 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 24/129 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A ++PF T PN GIV Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKKLADIVNPERVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQ---CILD 260 EF+ DI G++ A +G G+G++FL + T + H+V +++ +D Sbjct: 66 TTMEFV--DIAGLVAGASKGEGMGNQFLANIRETDAIAHVVRCFDDDNVVHVDGRVSPID 123 Query: 261 ELSAYNSEL 269 ++ N+EL Sbjct: 124 DIETINTEL 132 >gi|212703014|ref|ZP_03311142.1| hypothetical protein DESPIG_01052 [Desulfovibrio piger ATCC 29098] gi|212673602|gb|EEB34085.1| hypothetical protein DESPIG_01052 [Desulfovibrio piger ATCC 29098] Length = 366 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 19/109 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV------------KEGYKEF 208 IGI+GLPN GKST ++T+A+ + A+YPF T+ PN V K K+ Sbjct: 5 IGIVGLPNVGKSTLFNALTKAQNAQAANYPFCTIEPNKATVAVPDERVDALSAKVSPKKT 64 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 I A DI G+++ A +G G+G++FL + ++ +V E EN+ Sbjct: 65 IHASVDFIDIAGLVRGASKGEGLGNQFLGNIRECAAIVEVVRCFEDENI 113 >gi|121997777|ref|YP_001002564.1| GTP-binding protein YchF [Halorhodospira halophila SL1] gi|121589182|gb|ABM61762.1| GTP-binding protein YchF [Halorhodospira halophila SL1] Length = 363 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 21/107 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----EGYK---------- 206 + GI+GLPN GKST ++T+ +YPF T+ PN+GIV Y+ Sbjct: 4 NCGIVGLPNVGKSTLFNALTQNDIPAENYPFCTIDPNVGIVAVPDPRLYRLAELVRPERT 63 Query: 207 -----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 EF+ DI G++ A +G G+G++FL H T + ++ E Sbjct: 64 IPTTMEFV--DIAGLVSGASKGEGLGNQFLAHIRETDAVAMVLRCFE 108 >gi|218884643|ref|YP_002429025.1| translation-associated GTPase [Desulfurococcus kamchatkensis 1221n] gi|218766259|gb|ACL11658.1| Predicted GTPase [Desulfurococcus kamchatkensis 1221n] Length = 410 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 25/110 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI------------------VKE 203 IGI+G N GKST +++T KIA++PFTT+ PN+G+ + Sbjct: 8 IGIVGKTNVGKSTLFSAITLLPVKIANHPFTTIEPNIGVGHVRVRCVHTEIGLPRCDPRA 67 Query: 204 GY----KEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G+ + FI + D+ G+I A G G+G++F+ + VL+H+V A Sbjct: 68 GFCISGERFIPVKIIDVAGLIPGASMGRGLGNKFMDDLRQADVLIHVVDA 117 >gi|254166533|ref|ZP_04873387.1| GTPase, putative [Aciduliprofundum boonei T469] gi|289596215|ref|YP_003482911.1| GTPase of unknown function domain protein [Aciduliprofundum boonei T469] gi|197624143|gb|EDY36704.1| GTPase, putative [Aciduliprofundum boonei T469] gi|289534002|gb|ADD08349.1| GTPase of unknown function domain protein [Aciduliprofundum boonei T469] Length = 400 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 24/111 (21%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN--LGIVK-------------- 202 + ++GI+G PN GKSTF A+ T +I +YPFTT+ N +G V+ Sbjct: 1 MVELGIVGKPNVGKSTFFAAATLQTVEIGNYPFTTIEANRAIGYVRKPCPHLDLGKQCNP 60 Query: 203 ------EG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS 245 EG Y L D+ G++ AH G G+G++FL L+HI+ Sbjct: 61 KKSLCIEGTRYIPVELIDVAGLVPEAHAGRGLGNKFLDDLRHADALIHIID 111 >gi|71065454|ref|YP_264181.1| GTP-dependent nucleic acid-binding protein EngD [Psychrobacter arcticus 273-4] gi|71038439|gb|AAZ18747.1| conserved hypothetical protein [Psychrobacter arcticus 273-4] Length = 363 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 24/129 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+A ++PF T PN GIV Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKKLADIVNPERVLP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQ---CILD 260 EF+ DI G++ A +G G+G++FL + T + H+V +++ +D Sbjct: 66 TTMEFV--DIAGLVAGASKGEGMGNQFLANIRETDAIAHVVRCFDDDNVVHVDGRVSPID 123 Query: 261 ELSAYNSEL 269 ++ N+EL Sbjct: 124 DIETINTEL 132 >gi|254167533|ref|ZP_04874385.1| GTPase, putative [Aciduliprofundum boonei T469] gi|197623796|gb|EDY36359.1| GTPase, putative [Aciduliprofundum boonei T469] Length = 400 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 24/111 (21%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN--LGIVK-------------- 202 + ++GI+G PN GKSTF A+ T +I +YPFTT+ N +G V+ Sbjct: 1 MVELGIVGKPNVGKSTFFAAATLQTVEIGNYPFTTIEANRAIGYVRKPCPHLELGKQCNP 60 Query: 203 ------EG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS 245 EG Y L D+ G++ AH G G+G++FL L+HI+ Sbjct: 61 KKSLCIEGTRYIPVELIDVAGLVPEAHAGRGLGNKFLDDLRHADALIHIID 111 >gi|116071083|ref|ZP_01468352.1| hypothetical protein BL107_15595 [Synechococcus sp. BL107] gi|116066488|gb|EAU72245.1| hypothetical protein BL107_15595 [Synechococcus sp. BL107] Length = 363 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST F A V A+ + A++PF T+ PN+G V Sbjct: 5 GIVGLPNVGKSTLFNALVANAQAQAANFPFCTIEPNVGTVSVPDDRLQLLTDLSKSQNTV 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QG G+G++FL + ++H+V E++ Sbjct: 65 PTRMEFV--DIAGLVKGASQGEGLGNKFLSNIREVDAIVHVVRCFEDD 110 >gi|281356179|ref|ZP_06242672.1| GTP-binding protein YchF [Victivallis vadensis ATCC BAA-548] gi|281317548|gb|EFB01569.1| GTP-binding protein YchF [Victivallis vadensis ATCC BAA-548] Length = 366 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 21/106 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 G +GLPN GKST ++ + + A++PF T+ PN GIV Sbjct: 6 GFVGLPNVGKSTLFNALCKGGAEAANFPFCTIEPNTGIVPVPDERLQVLSDLEHSGRIVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 +FI DI G++K A QG G+G++FL H + H+V ++ Sbjct: 66 STLKFI--DIAGLVKGASQGQGLGNQFLGHIRSVDAIAHVVRLFDD 109 >gi|90022899|ref|YP_528726.1| GTP-dependent nucleic acid-binding protein EngD [Saccharophagus degradans 2-40] gi|89952499|gb|ABD82514.1| conserved hypothetical protein [Saccharophagus degradans 2-40] Length = 363 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 17/104 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T A ++PF T+ PN GIV +E Sbjct: 6 GIVGLPNVGKSTLFNALTSAGIDAENFPFCTIEPNSGIVPVPDPRMDKISALVKPQRELP 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++ A +G G+G++FL + T + H+V ++ Sbjct: 66 ATMEFVDIAGLVAGASKGEGLGNQFLANIRETEAIAHVVRCFDD 109 >gi|325118830|emb|CBZ54382.1| putative GTP-binding protein [Neospora caninum Liverpool] Length = 386 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGI-------------------- 200 IG +G P+AGKSTF + T + K+ ++PFTT+ PN GI Sbjct: 8 IGCVGKPSAGKSTFFNAATEGSNAKVGNFPFTTINPNEGIGFFLTDCPCTKNPECQCNPR 67 Query: 201 ---VKEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 +G Y L D+ G+I AH+G G+G++FL VL+H++ Sbjct: 68 YGRCLQGRRYVPVKLLDVAGLIPGAHEGRGLGNKFLDDLRHADVLMHVI 116 >gi|99080065|ref|YP_612219.1| GTP-dependent nucleic acid-binding protein EngD [Ruegeria sp. TM1040] gi|99036345|gb|ABF62957.1| hypothetical protein TM1040_0224 [Ruegeria sp. TM1040] Length = 365 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G V K+ Sbjct: 5 MGIVGLPNVGKSTLFNALTKTASAQAANFPFCTIEPNVGEVGVPDARLDKLAAIAQSKQI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G++K A +G G+G++FL + + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIREVDAIAHVLRCFED 110 >gi|161529042|ref|YP_001582868.1| translation-associated GTPase [Nitrosopumilus maritimus SCM1] gi|160340343|gb|ABX13430.1| GTP-binding protein HSR1-related [Nitrosopumilus maritimus SCM1] Length = 398 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 22/105 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--VKEGY-------------- 205 IG++G N GKSTF ++ T ++PFTT+ PN+G+ VK Sbjct: 6 IGLLGKANVGKSTFFSAATETPVASGNFPFTTIEPNVGVAYVKADCACKHFKIEHQTDLC 65 Query: 206 ---KEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 FI L DI G++ AH+G G+G++FL + VL+H+V Sbjct: 66 VNGTRFIPVKLIDIAGLVPGAHEGKGLGNQFLDDARQAEVLIHVV 110 >gi|294790710|ref|ZP_06755868.1| GTP-binding protein YchF [Scardovia inopinata F0304] gi|294458607|gb|EFG26960.1| GTP-binding protein YchF [Scardovia inopinata F0304] Length = 372 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI+GLPN GKST ++TR +YPF T+ PN GIV K Sbjct: 16 IGIVGLPNVGKSTLFNALTRNNVLAENYPFATIEPNTGIVPLPDSRLQVLAKLVHTSKIV 75 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI GI+K A +G G+G++FL + + + ++ Sbjct: 76 PATVTFVDIAGIVKGASEGEGLGNQFLANIREADAICEVTRVFTDD 121 >gi|46139909|ref|XP_391645.1| hypothetical protein FG11469.1 [Gibberella zeae PH-1] Length = 401 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 20/131 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFI---------- 209 +G +GLPN GKS+ +T +YPF T+ PN V + +F+ Sbjct: 25 MGCVGLPNVGKSSLFNLLTEQSAAAENYPFCTIEPNEARCAVPDARYDFLCDLWKPPSMY 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 + DI G+IK A QG G+G+ FL H + + HIV A + + +D + Sbjct: 85 PAYLQVTDIAGLIKGASQGEGLGNAFLSHIQAVDGIFHIVRAFDNDQVLHVDDSIDPVRD 144 Query: 262 LSAYNSELRKK 272 L+ SEL KK Sbjct: 145 LNTIQSELCKK 155 >gi|149916132|ref|ZP_01904654.1| hypothetical protein RAZWK3B_10752 [Roseobacter sp. AzwK-3b] gi|149809987|gb|EDM69836.1| hypothetical protein RAZWK3B_10752 [Roseobacter sp. AzwK-3b] Length = 365 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLG-----------IVKEGYKEFI 209 +GI+GLPN GKST ++T+ A + A++PF T+ PN+G + + G I Sbjct: 5 MGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGEVNVPDARLDTLARIGGSATI 64 Query: 210 L------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G++K A +G G+G++FL + + H++ E+ Sbjct: 65 IPTRMTFVDIAGLVKGASKGEGLGNQFLANIREVDAIAHVLRCFED 110 >gi|56118903|ref|NP_001008044.1| obg-like ATPase 1 [Xenopus (Silurana) tropicalis] gi|82181395|sp|Q66JG0|OLA1_XENTR RecName: Full=Obg-like ATPase 1 gi|51703844|gb|AAH80929.1| MGC79585 protein [Xenopus (Silurana) tropicalis] Length = 396 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 76/146 (52%), Gaps = 24/146 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IGI+GLPN GKSTF +T+++ ++PF T+ PN + + E + EF+ Sbjct: 25 IGIVGLPNIGKSTFFNVLTKSQAAAENFPFCTINPNESRVPVPDERF-EFLCQYHKPASK 83 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCIL 259 + DI G++K A G G+G+ FL + + H++ A +++ V+ + + Sbjct: 84 VPAFLNVVDIAGLVKGASTGQGLGNAFLSNISACDGIFHLMRAFDDDDIIHVEGSVNPVR 143 Query: 260 DELSAYNSELRKKIEIVGLSQIDTVD 285 D + + ELR K E + ++ +D ++ Sbjct: 144 D-IEIIHEELRLKDEEMIIAALDKLE 168 >gi|193083926|gb|ACF09604.1| GTPase of unknown function-like protein [uncultured marine crenarchaeote KM3-34-D9] Length = 220 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------------------- 200 IG+IG N GK+TF S T + +I+ YPFTT P+ I Sbjct: 5 IGLIGKTNTGKTTFFNSSTLSTDEISTYPFTTKKPSTSIGHAITLCVHKEFNVQDNPNNS 64 Query: 201 -VKEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 +G++ L D+PG+I +A +G G+G++FL ++ LLH+V A Sbjct: 65 KCSDGWRYIPIELIDLPGLITDAWKGKGLGNQFLSIAAQSDALLHVVDA 113 >gi|50546703|ref|XP_500821.1| YALI0B12936p [Yarrowia lipolytica] gi|49646687|emb|CAG83072.1| YALI0B12936p [Yarrowia lipolytica] Length = 371 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 53/95 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+ L +T K +IA Y FTTL G+++ E + D+PGII+ Sbjct: 66 ARVALIGFPSVGKSSLLGKITNTKSEIAAYAFTTLTSVPGVLEYNGAEIQILDLPGIIQG 125 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A +G G G + + + ++L ++ A + Q A Sbjct: 126 ASEGKGRGRQVVSTAKTADLVLMVLDATKPEEQRA 160 >gi|88856111|ref|ZP_01130772.1| hypothetical protein A20C1_12952 [marine actinobacterium PHSC20C1] gi|88814679|gb|EAR24540.1| hypothetical protein A20C1_12952 [marine actinobacterium PHSC20C1] Length = 358 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 17/100 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-----------YKEFIL 210 I I+GLPN GKST ++T+ A+YPF T+ PN+GIV E IL Sbjct: 5 IAIVGLPNVGKSTLFNALTKNSVLAANYPFATIEPNVGIVNLPDPRLKVLAGIFNSERIL 64 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI GI++ A +G G+G++FL + + +V Sbjct: 65 PAPVSFVDIAGIVQGASEGEGLGNKFLANIREADAIAQVV 104 >gi|103487106|ref|YP_616667.1| GTP-dependent nucleic acid-binding protein EngD [Sphingopyxis alaskensis RB2256] gi|98977183|gb|ABF53334.1| conserved hypothetical protein [Sphingopyxis alaskensis RB2256] Length = 365 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIV-----------------KEG 204 GI+GLPN GKST ++T A + A+YPF T+ PN+G V K Sbjct: 6 GIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNIGNVAVPDDRLDKLAAIANSKKII 65 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+++ A +G G+G++FL + ++H++ E + Sbjct: 66 ATQLAFVDIAGLVRGASKGEGLGNQFLGNIREVDAIVHVLRCFEND 111 >gi|168048097|ref|XP_001776504.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672095|gb|EDQ58637.1| predicted protein [Physcomitrella patens subsp. patens] Length = 394 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 30/172 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------------KEGY 205 IGI+GLPN GKST ++T+ ++PF T+ PN V K Sbjct: 27 IGIVGLPNVGKSTLFNTLTKLAIPAMNFPFCTIEPNEARVYVPDERFDWLCQLFKPKSEV 86 Query: 206 KEFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 F+ + DI G+++ A++G G+G+ FL H + H++ A ++ +V+ + + D Sbjct: 87 AAFLEINDIAGLVRGANEGQGLGNAFLSHIRAVDGIFHVLRAFDDPEVTHVEDSVDPVRD 146 Query: 261 ELSAYNSELR-KKIEIVGLSQIDTVDSDTLARKKN----ELATQCGQVPFEF 307 L + ELR K IE + +ID D + + ++ N ++ +C Q +++ Sbjct: 147 -LEIISQELRLKDIEFME-KKID--DCEKVLKRSNAKEAKMELECCQKVYDW 194 >gi|6321612|ref|NP_011689.1| Rbg2p [Saccharomyces cerevisiae S288c] gi|1723727|sp|P53295|RBG2_YEAST RecName: Full=Ribosome-interacting GTPase 2; AltName: Full=GTP-binding protein RBG2 gi|1323306|emb|CAA97199.1| unnamed protein product [Saccharomyces cerevisiae] gi|151943451|gb|EDN61762.1| ribosome interacting GTPase [Saccharomyces cerevisiae YJM789] gi|190406811|gb|EDV10078.1| GTP-binding protein 1 [Saccharomyces cerevisiae RM11-1a] gi|256272034|gb|EEU07047.1| Rbg2p [Saccharomyces cerevisiae JAY291] gi|285812368|tpg|DAA08268.1| TPA: Rbg2p [Saccharomyces cerevisiae S288c] gi|323304897|gb|EGA58655.1| Rbg2p [Saccharomyces cerevisiae FostersB] gi|323333569|gb|EGA74963.1| Rbg2p [Saccharomyces cerevisiae AWRI796] gi|323337475|gb|EGA78723.1| Rbg2p [Saccharomyces cerevisiae Vin13] gi|323354854|gb|EGA86687.1| Rbg2p [Saccharomyces cerevisiae VL3] Length = 368 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 51/95 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+ L +T K +IA Y FTTL G++K E + D+PGII Sbjct: 64 ARVVLIGYPSVGKSSLLGKITTTKSEIAHYAFTTLTSVPGVLKYQGAEIQIVDLPGIIYG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A QG G G + + ++L ++ A + Q A Sbjct: 124 ASQGKGRGRQVVATARTADLVLMVLDATKSEHQRA 158 >gi|110668534|ref|YP_658345.1| translation-associated GTPase [Haloquadratum walsbyi DSM 16790] gi|109626281|emb|CAJ52739.1| probable GTP-binding protein [Haloquadratum walsbyi DSM 16790] Length = 390 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 20/105 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------------ 203 I + G PNAGKSTF + T A + +YPFTT+ PN G+ Sbjct: 4 IALAGKPNAGKSTFYQAATMADVDVGNYPFTTIDPNQGVTHARTRCPCLDTETRCGNCTD 63 Query: 204 --GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 Y L D+ G++ AH+G G+G++FL +L +V A Sbjct: 64 GIRYVPVELLDVAGLVPGAHEGRGLGNQFLDALTDADAILAVVDA 108 >gi|156843273|ref|XP_001644705.1| hypothetical protein Kpol_1056p48 [Vanderwaltozyma polyspora DSM 70294] gi|156115353|gb|EDO16847.1| hypothetical protein Kpol_1056p48 [Vanderwaltozyma polyspora DSM 70294] Length = 369 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+ L +T K +IA Y FTTL G++K E + D+PGII Sbjct: 65 ARVVLIGYPSVGKSSLLGKITSTKSEIAHYSFTTLTSVPGVLKHEGAEIQIVDLPGIIYG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A QG G G + + ++L ++ A + Q + + EL A L K+ Sbjct: 125 ASQGKGRGRQVVATARTADLVLMVLDATKSKHQR--ESLEKELEAVGIRLNKE 175 >gi|289741485|gb|ADD19490.1| GTP-binding protein DRG2 [Glossina morsitans morsitans] Length = 363 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 54/93 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T+ + + A+Y FTTL G+++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTLLSTLTKTESEAANYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + +++ ++ A + NV Sbjct: 122 AAQGKGRGRQVIAVARTADLVIMMLDATKPNVH 154 >gi|194747639|ref|XP_001956259.1| GF25119 [Drosophila ananassae] gi|190623541|gb|EDV39065.1| GF25119 [Drosophila ananassae] Length = 397 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 36/180 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+G+PN GKSTF +T++ ++PF T+ PN V F Sbjct: 24 IGIVGVPNVGKSTFFNVLTQSAAPAENFPFCTIKPNESRVPVPDDRFDFLVDFHKPASVV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G++K A +G G+G+ FL H + H+ A E+ +V+ + D Sbjct: 84 PAYLNVVDIAGLVKGAAEGQGLGNDFLSHISACDAIFHLTRAFEDPDVTHVEGEVDPVRD 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDS--------------DTLARKKNELATQCGQVPFE 306 L ELR K E +D ++ D++ + K L Q Q+ FE Sbjct: 144 -LEIICEELRLKDEEKLHQALDKLEKVVARGGDKKLKPEYDSMLKIKEVLVDQKRQLRFE 202 >gi|323348444|gb|EGA82689.1| Rbg2p [Saccharomyces cerevisiae Lalvin QA23] Length = 368 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 51/95 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+ L +T K +IA Y FTTL G++K E + D+PGII Sbjct: 64 ARVVLIGYPSVGKSSLLGKITTTKSEIAHYAFTTLTSVPGVLKYQGAEIQIVDLPGIIYG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A QG G G + + ++L ++ A + Q A Sbjct: 124 ASQGKGRGRQVVATARTADLVLMVLDATKSEHQRA 158 >gi|320582059|gb|EFW96277.1| GTP-binding protein 1 [Pichia angusta DL-1] Length = 371 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 5/104 (4%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+FL+ VT+ + A Y FTTL G+++ E + D+PGIIK Sbjct: 66 ARVCLIGYPSVGKSSFLSKVTKTQSAAAAYEFTTLTSVPGVLRYEGAEIQIVDLPGIIKG 125 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE-----ENVQAAYQCI 258 A +G G G + + + ++L ++ A + EN++ + I Sbjct: 126 ASEGKGRGRQVVATAKTADLILMVLDATKGPDQRENLEKELEAI 169 >gi|283834791|ref|ZP_06354532.1| GTP-binding protein HflX [Citrobacter youngae ATCC 29220] gi|291069037|gb|EFE07146.1| GTP-binding protein HflX [Citrobacter youngae ATCC 29220] Length = 426 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNQITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A ++EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADFRVQENIEAV-DTVLEEIDAHEIPT--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++E + + S+ TG GIPQ+ + L +++ Sbjct: 313 --LLVMNKIDMLDDFEPRIDRDE---ENKPIRVWVSAQTGIGIPQLFQALTERL 361 >gi|124027435|ref|YP_001012755.1| translation-associated GTPase [Hyperthermus butylicus DSM 5456] gi|123978129|gb|ABM80410.1| predicted GTPase, probable translation factor [Hyperthermus butylicus DSM 5456] Length = 409 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 53/109 (48%), Gaps = 25/109 (22%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI------------------VKEG 204 GI+G N GKSTF A+ T A +I + PF TL P+ G+ G Sbjct: 9 GIVGKTNVGKSTFFAAATLATVEIGNRPFVTLEPSTGVGYVRKRCIHVELGLPRCEPASG 68 Query: 205 Y----KEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 Y FI L DIPG+I AH+G G+G++FL R ++ +V A Sbjct: 69 YCIDSWRFIPVKLVDIPGLIPGAHEGKGLGNKFLDAIRRADAIILVVDA 117 >gi|259146678|emb|CAY79935.1| Rbg2p [Saccharomyces cerevisiae EC1118] Length = 368 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 51/95 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+ L +T K +IA Y FTTL G++K E + D+PGII Sbjct: 64 ARVVLIGYPSVGKSSLLGKITTTKSEIAHYAFTTLTSVPGVLKYQGAEIQIVDLPGIIYG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A QG G G + + ++L ++ A + Q A Sbjct: 124 ASQGKGRGRQVVATARTADLVLMVLDATKSEHQRA 158 >gi|89272898|emb|CAJ83205.1| novel protein similar to GTP-binding protein PTD004 [Xenopus (Silurana) tropicalis] Length = 396 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 76/146 (52%), Gaps = 24/146 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IGI+GLPN GKSTF +T+++ ++PF T+ PN + + E + EF+ Sbjct: 25 IGIVGLPNIGKSTFFNVLTKSQAAAENFPFCTINPNESRVPVPDERF-EFLCQYHKPASK 83 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCIL 259 + DI G++K A G G+G+ FL + + H++ A +++ V+ + + Sbjct: 84 VPAFLNVVDIAGLVKGASTGQGLGNAFLSNISACDGIFHLMRAFDDDDIIHVEGSVNPVR 143 Query: 260 DELSAYNSELRKKIEIVGLSQIDTVD 285 D + + ELR K E + ++ +D ++ Sbjct: 144 D-IEIIHEELRLKDEEMIIAALDKLE 168 >gi|256397369|ref|YP_003118933.1| GTP-dependent nucleic acid-binding protein EngD [Catenulispora acidiphila DSM 44928] gi|256363595|gb|ACU77092.1| GTP-binding protein YchF [Catenulispora acidiphila DSM 44928] Length = 357 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 17/100 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------KEGYKE---- 207 IGI+GLPN GKST ++T+ A+YPF T+ PN G+V E Y Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIDPNEGVVGVPDPRLAALAELYTSQKVV 64 Query: 208 ---FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI GI++ A +G G+G++FL + + ++ Sbjct: 65 PATVTFVDIAGIVRGASEGQGLGNKFLANIREADAICQVI 104 >gi|114769267|ref|ZP_01446893.1| GTP-binding protein YchF [alpha proteobacterium HTCC2255] gi|114550184|gb|EAU53065.1| GTP-binding protein YchF [alpha proteobacterium HTCC2255] Length = 365 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+G+PN GKST ++TR A + A++PF T+ PN G V K I Sbjct: 6 GIVGMPNVGKSTLFNALTRTAAAQAANFPFCTIEPNTGEVSVPDERLDLLSQIASSKTII 65 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI G++K A +G G+G++FL + + H++ +++ Sbjct: 66 PARMTFVDIAGLVKGASKGEGLGNQFLANIRECDAIAHVLRCFDDD 111 >gi|46579840|ref|YP_010648.1| GTP-dependent nucleic acid-binding protein EngD [Desulfovibrio vulgaris str. Hildenborough] gi|46449256|gb|AAS95907.1| GTP-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|311234155|gb|ADP87009.1| GTP-binding protein YchF [Desulfovibrio vulgaris RCH1] Length = 366 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 19/109 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 IGI+GLPN GKST ++T+A+ + A+YPF T+ PN V + E + Sbjct: 5 IGIVGLPNVGKSTLFNALTKAQNAEAANYPFCTIEPNKATVAVPDKRLDALAEIVKPQRV 64 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI G+++ A +G G+G++FL + +L +V +EN+ Sbjct: 65 LHATVDFIDIAGLVRGASKGEGLGNQFLANIRECAAILEVVRCFDDENI 113 >gi|257455042|ref|ZP_05620286.1| GTP-binding protein YchF [Enhydrobacter aerosaccus SK60] gi|257447555|gb|EEV22554.1| GTP-binding protein YchF [Enhydrobacter aerosaccus SK60] Length = 363 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 21/109 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKQLADIVKPERV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V +++ Sbjct: 64 VPTSMEFV--DIAGLVAGASKGEGMGNQFLANIRETDAIAHVVRCFDDD 110 >gi|120602691|ref|YP_967091.1| GTP-dependent nucleic acid-binding protein EngD [Desulfovibrio vulgaris DP4] gi|120562920|gb|ABM28664.1| GTP-binding protein YchF [Desulfovibrio vulgaris DP4] Length = 366 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 19/109 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------EGYKEFI----- 209 IGI+GLPN GKST ++T+A+ + A+YPF T+ PN V + E + Sbjct: 5 IGIVGLPNVGKSTLFNALTKAQNAEAANYPFCTIEPNKATVAVPDKRLDALAEIVKPQRV 64 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 DI G+++ A +G G+G++FL + +L +V +EN+ Sbjct: 65 LHATVDFIDIAGLVRGASKGEGLGNQFLANIRECAAILEVVRCFDDENI 113 >gi|83595077|ref|YP_428829.1| GTP-dependent nucleic acid-binding protein EngD [Rhodospirillum rubrum ATCC 11170] gi|83577991|gb|ABC24542.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170] Length = 367 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 22/107 (20%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIV--------------KEGYK- 206 GI+GLPN GKST ++T A + A++PF T+ PN+G V K K Sbjct: 6 GIVGLPNVGKSTLFNALTSTAAAQAANFPFCTIEPNVGRVAVPDPRLDTLVEIGKSANKV 65 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 EF+ DI G+++ A +G G+G++FL + ++H++ E+ Sbjct: 66 PTQLEFV--DIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFED 110 >gi|91227452|ref|ZP_01261816.1| GTP-binding protein HflX [Vibrio alginolyticus 12G01] gi|254230082|ref|ZP_04923480.1| GTPase of unknown function subfamily, putative [Vibrio sp. Ex25] gi|262393034|ref|YP_003284888.1| GTP-binding protein HflX [Vibrio sp. Ex25] gi|269967705|ref|ZP_06181754.1| GTP-binding protein HflX [Vibrio alginolyticus 40B] gi|91188602|gb|EAS74893.1| GTP-binding protein HflX [Vibrio alginolyticus 12G01] gi|151937416|gb|EDN56276.1| GTPase of unknown function subfamily, putative [Vibrio sp. Ex25] gi|262336628|gb|ACY50423.1| GTP-binding protein HflX [Vibrio sp. Ex25] gi|269827683|gb|EEZ81968.1| GTP-binding protein HflX [Vibrio alginolyticus 40B] Length = 429 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 19/185 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +T A AD F TL P L ++ ILAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIELADVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T+ +LLH+V A EN+QA ++ +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAVHE-VLEEIDAHEVPT--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFSIR 330 +V +++ID +DS +++E VP S++ G GI + E L +++ S Sbjct: 313 --LVVMNKIDNLDSQKPRIERDEEG-----VPRAVWVSAMDGLGIDVLFEALTERLASQM 365 Query: 331 GENEF 335 E++ Sbjct: 366 VEHQL 370 >gi|284166261|ref|YP_003404540.1| hypothetical protein Htur_2999 [Haloterrigena turkmenica DSM 5511] gi|284015916|gb|ADB61867.1| GTPase of unknown function domain protein [Haloterrigena turkmenica DSM 5511] Length = 399 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL----------------------YPNLG 199 IG++G P+ GKS+F + T YPFTT+ PN+G Sbjct: 7 IGLVGKPSVGKSSFFNAATMNDVPEGAYPFTTIDPSVGEAYVRVDCAAPEFDEECTPNVG 66 Query: 200 IVKEGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS 245 G + F+ L D+ G+I AH+GAG+G++FL T VL+H+V Sbjct: 67 YCDHGTR-FVPTKLVDVAGLIPGAHEGAGLGNQFLSDLNETDVLVHVVD 114 >gi|47210849|emb|CAF89715.1| unnamed protein product [Tetraodon nigroviridis] Length = 364 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 53/93 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTESEAASYEFTTLTCIPGVIQYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + V++ ++ A + +VQ Sbjct: 123 AAQGKGRGRQVIAVARTADVVIMMLDATKGDVQ 155 >gi|242398500|ref|YP_002993924.1| Predicted GTPase, containing TGS domain [Thermococcus sibiricus MM 739] gi|242264893|gb|ACS89575.1| Predicted GTPase, containing TGS domain [Thermococcus sibiricus MM 739] Length = 397 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 24/110 (21%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------VKE--------- 203 ++GI+G PN GKSTF A+ T +IA+YPFTT+ N+G+ KE Sbjct: 2 EVGIVGKPNVGKSTFFAAATLVDVQIANYPFTTIDANIGVSYATAVHPCKEIGCVPNPQN 61 Query: 204 -GYKEFI------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 Y+ + + D+ G++ AH+ G+G++FL L+HI+ Sbjct: 62 YEYRNGVSLIPIKMIDVAGLVPGAHERRGLGNKFLDDLRMASALIHIIDV 111 >gi|198245642|ref|YP_002218246.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197940158|gb|ACH77491.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326626051|gb|EGE32396.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 426 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNQITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH+V A ++EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVVDAADVRVQENIEAV-NTVLEEIDAHEIPT--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++E + + S+ +G GIPQ+ + L +++ Sbjct: 313 --LMVMNKIDMLDDFEPRIDRDE---ENKPIRVWLSARSGVGIPQLFQALTERL 361 >gi|70948715|ref|XP_743834.1| GTP-binding protein [Plasmodium chabaudi chabaudi] gi|56523524|emb|CAH82295.1| conserved GTP-binding protein, putative [Plasmodium chabaudi chabaudi] Length = 378 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 17/104 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +G++GLPN GKST +T+ +YPF T+ P+ + +V E + + Sbjct: 10 MGLVGLPNVGKSTTFNVLTKLNIPAENYPFCTIDPHEAKVNVVDERFDWLVDHFKPKSSV 69 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++KNAH G G+G+ FL + + H+V A E Sbjct: 70 HAYLSIFDIAGLVKNAHLGEGLGNNFLSNIAAVDGIYHVVRAFE 113 >gi|326929029|ref|XP_003210674.1| PREDICTED: developmentally-regulated GTP-binding protein 2-like [Meleagris gallopavo] Length = 353 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 52/95 (54%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 52 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 111 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A QG G G + + V++ ++ A + VQ A Sbjct: 112 AAQGKGRGRQVIAVARTADVVIMMLDATKGEVQRA 146 >gi|207345029|gb|EDZ71979.1| YGR173Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 255 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 51/95 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+ L +T K +IA Y FTTL G++K E + D+PGII Sbjct: 64 ARVVLIGYPSVGKSSLLGKITTTKSEIAHYAFTTLTSVPGVLKYQGAEIQIVDLPGIIYG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A QG G G + + ++L ++ A + Q A Sbjct: 124 ASQGKGRGRQVVATARTADLVLMVLDATKSEHQRA 158 >gi|114704352|ref|ZP_01437260.1| hypothetical protein FP2506_05446 [Fulvimarina pelagi HTCC2506] gi|114539137|gb|EAU42257.1| hypothetical protein FP2506_05446 [Fulvimarina pelagi HTCC2506] Length = 367 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLG--------------IVKEGY-- 205 GI+GLPN GKST ++T+ A + A+YPF T+ PN G I K Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGDVAVPDSRLKNIAGIAKSANVI 65 Query: 206 -KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+++ A +G G+G++FL + ++H++ E+ Sbjct: 66 PTRITFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFED 110 >gi|229815900|ref|ZP_04446224.1| hypothetical protein COLINT_02956 [Collinsella intestinalis DSM 13280] gi|229808595|gb|EEP44373.1| hypothetical protein COLINT_02956 [Collinsella intestinalis DSM 13280] Length = 359 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 22/103 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IGI+GLPN GKST ++T+ A+YPF T+ PN+GIV Sbjct: 5 IGIVGLPNVGKSTLFTALTKKGGLAANYPFATIDPNVGIVDVPDDRLNALAKIVNPARIL 64 Query: 203 EGYKEFILADIPGIIKN-AHQGAGIGDRFLKHTERTHVLLHIV 244 EF+ DI G++K A +GAG+G++FL + + +V Sbjct: 65 PATVEFV--DIAGLVKGAASEGAGLGNQFLANIRECDAICQVV 105 >gi|200387229|ref|ZP_03213841.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199604327|gb|EDZ02872.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 426 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNQITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH+V A ++EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVVDAADVRVQENIEAV-NTVLEEIDAHEIPT--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++E + + S+ +G GIPQ+ + L +++ Sbjct: 313 --LMVMNKIDMLDDFEPRIDRDE---ENKPIRVWLSAQSGVGIPQLFQALTERL 361 >gi|149200578|ref|ZP_01877585.1| translation-associated GTPase [Lentisphaera araneosa HTCC2155] gi|149136323|gb|EDM24769.1| translation-associated GTPase [Lentisphaera araneosa HTCC2155] Length = 367 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++ RA + A+YPF T+ PN+GIV K Y Sbjct: 7 GIVGLPNVGKSTLFNAIARAGAEAANYPFCTIEPNVGIVPVPDVRVDKLSEIVKPNKIQY 66 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A G G G++FL++ + T ++ +V + + Sbjct: 67 ATIEFVDIAGLVRGASSGEGRGNQFLENIQHTDAIVQVVRCFDND 111 >gi|71894771|ref|NP_001025805.1| developmentally-regulated GTP-binding protein 2 [Gallus gallus] gi|53130406|emb|CAG31532.1| hypothetical protein RCJMB04_7i14 [Gallus gallus] Length = 364 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 52/95 (54%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A QG G G + + V++ ++ A + VQ A Sbjct: 123 AAQGKGRGRQVIAVARTADVVIMMLDATKGEVQRA 157 >gi|16767608|ref|NP_463223.1| GTPase HflX [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56416153|ref|YP_153228.1| GTPase HflX [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62182808|ref|YP_219225.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161617632|ref|YP_001591597.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167554132|ref|ZP_02347873.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167995166|ref|ZP_02576256.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168231397|ref|ZP_02656455.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168239732|ref|ZP_02664790.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244860|ref|ZP_02669792.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263286|ref|ZP_02685259.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464754|ref|ZP_02698657.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168822511|ref|ZP_02834511.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194445750|ref|YP_002043617.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194447627|ref|YP_002048405.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469690|ref|ZP_03075674.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735629|ref|YP_002117303.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197250031|ref|YP_002149276.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263462|ref|ZP_03163536.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197365079|ref|YP_002144716.1| GTPase HflX [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|204927022|ref|ZP_03218224.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205355120|ref|YP_002228921.1| GTPase HflX [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859508|ref|YP_002246159.1| GTPase HflX [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238910520|ref|ZP_04654357.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16422922|gb|AAL23182.1| putative GTP-ase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56130410|gb|AAV79916.1| HflX protein, putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62130441|gb|AAX68144.1| putative GTP-ase, together with HflCK possibly involved in phage lambda cII repressor stability [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161366996|gb|ABX70764.1| hypothetical protein SPAB_05495 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404413|gb|ACF64635.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194405931|gb|ACF66150.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456054|gb|EDX44893.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711131|gb|ACF90352.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195632844|gb|EDX51298.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197096556|emb|CAR62166.1| HflX protein, putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213734|gb|ACH51131.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241717|gb|EDY24337.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197287598|gb|EDY26990.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204323687|gb|EDZ08882.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205274901|emb|CAR39968.1| HflX protein, putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205321589|gb|EDZ09428.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327107|gb|EDZ13871.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334280|gb|EDZ21044.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336311|gb|EDZ23075.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205341064|gb|EDZ27828.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347859|gb|EDZ34490.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206711311|emb|CAR35689.1| HflX protein, putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261249453|emb|CBG27318.1| HflX protein, putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996693|gb|ACY91578.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160851|emb|CBW20382.1| HflX protein, putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915460|dbj|BAJ39434.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320088789|emb|CBY98547.1| tRNA modification GTPase mnmE [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321222672|gb|EFX47744.1| GTP-binding protein HflX [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615524|gb|EFY12444.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618584|gb|EFY15473.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622003|gb|EFY18853.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627727|gb|EFY24518.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631034|gb|EFY27798.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637747|gb|EFY34448.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642411|gb|EFY39015.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644020|gb|EFY40568.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650488|gb|EFY46896.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653547|gb|EFY49875.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659733|gb|EFY55976.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662056|gb|EFY58272.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666195|gb|EFY62373.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672615|gb|EFY68726.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676045|gb|EFY72116.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680529|gb|EFY76567.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684577|gb|EFY80581.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322717310|gb|EFZ08881.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323132700|gb|ADX20130.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192892|gb|EFZ78118.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197232|gb|EFZ82372.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201651|gb|EFZ86715.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206165|gb|EFZ91127.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323215547|gb|EGA00291.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219532|gb|EGA04017.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227835|gb|EGA11989.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229005|gb|EGA13134.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236383|gb|EGA20459.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238712|gb|EGA22764.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241837|gb|EGA25866.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248014|gb|EGA31951.1| GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254655|gb|EGA38466.1| GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258286|gb|EGA41963.1| GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263568|gb|EGA47089.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265836|gb|EGA49332.1| GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270280|gb|EGA53728.1| GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326630277|gb|EGE36620.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332991173|gb|AEF10156.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 426 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNQITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH+V A ++EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVVDAADVRVQENIEAV-NTVLEEIDAHEIPT--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++E + + S+ +G GIPQ+ + L +++ Sbjct: 313 --LMVMNKIDMLDDFEPRIDRDE---ENKPIRVWLSAQSGVGIPQLFQALTERL 361 >gi|255711234|ref|XP_002551900.1| KLTH0B02530p [Lachancea thermotolerans] gi|238933278|emb|CAR21462.1| KLTH0B02530p [Lachancea thermotolerans] Length = 368 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 13/119 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+ L VT K +IA Y FTTL G++K E + D+PGII Sbjct: 64 ARVVLIGYPSVGKSSLLGKVTTTKSEIAHYAFTTLTSVPGVLKYQGAEVQIVDLPGIIYG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A QG G G + + ++L ++ A + A+Q L K++E VG+ Sbjct: 124 ASQGKGRGRQVVATARTADLILMVLDA----TKGAHQ---------RESLEKELEAVGI 169 >gi|332848364|ref|XP_001158504.2| PREDICTED: developmentally-regulated GTP-binding protein 2 isoform 2 [Pan troglodytes] Length = 386 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 13/119 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A QG G G + + V++ ++ A + VQ S L K++E VG+ Sbjct: 123 AAQGKGRGRQVIAVARTADVIIMMLDATKGEVQ-------------RSLLEKELESVGI 168 >gi|45184690|ref|NP_982408.1| AAL134Wp [Ashbya gossypii ATCC 10895] gi|44980036|gb|AAS50232.1| AAL134Wp [Ashbya gossypii ATCC 10895] Length = 368 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 51/93 (54%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+ L VT K ++A Y FTTL G++K E + D+PGII Sbjct: 64 ARVVLIGYPSVGKSSLLGKVTTTKSEVAHYAFTTLTSVPGVLKYQGAEIQMVDLPGIIHG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A +G G G + + +++ ++ A + N Q Sbjct: 124 ASKGKGRGRQVIATARTADLIVMVLDATKSNHQ 156 >gi|296113050|ref|YP_003626988.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella catarrhalis RH4] gi|295920744|gb|ADG61095.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella catarrhalis RH4] Length = 363 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 21/109 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKALAAIVNPERT 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V +++ Sbjct: 64 IATSMEFV--DIAGLVAGASKGEGMGNQFLANIRETDAIAHVVRCFDDD 110 >gi|225706210|gb|ACO08951.1| Developmentally-regulated GTP-binding protein 2 [Osmerus mordax] Length = 364 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 53/95 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYHGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A QG G G + + V++ ++ A + +VQ A Sbjct: 123 AAQGKGRGRQVIAVARTADVVIMMLDATKGDVQRA 157 >gi|190345731|gb|EDK37661.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC 6260] Length = 459 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 26/111 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 I ++G P++GKST L ++T A K+ +PFTT+ PN Sbjct: 55 IALVGKPSSGKSTTLNALTDANAKVGAFPFTTIDPNKATGYLEVECACSRFGKQKLCKPN 114 Query: 198 LGIVKEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G + G + +L D+ G++ NAH G G+G++FL L+HIV A Sbjct: 115 YGYCRNGKRGVPVMLLDVAGLVPNAHLGRGLGNKFLGDLTEADCLIHIVDA 165 >gi|82546586|ref|YP_410533.1| GTPase HflX [Shigella boydii Sb227] gi|187731219|ref|YP_001882864.1| putative GTPase HflX [Shigella boydii CDC 3083-94] gi|81247997|gb|ABB68705.1| GTP-binding subunit of protease [Shigella boydii Sb227] gi|187428211|gb|ACD07485.1| GTP-binding protein HflX [Shigella boydii CDC 3083-94] gi|320173673|gb|EFW48863.1| GTP-binding protein HflX [Shigella dysenteriae CDC 74-1112] gi|320187051|gb|EFW61762.1| GTP-binding protein HflX [Shigella flexneri CDC 796-83] gi|332087034|gb|EGI92168.1| GTP-binding proten HflX [Shigella boydii 3594-74] Length = 426 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A ++EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV-NTVLEEIDAH------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI L ++ +D + + + + S+ TG GIPQ+ + L +++ Sbjct: 309 -EIPTLLVMNKIDMLEDFEPRIDRDEENKPIRVWLSAQTGAGIPQLFQALTERL 361 >gi|317484657|ref|ZP_07943559.1| GTP-binding protein YchF [Bilophila wadsworthia 3_1_6] gi|316924088|gb|EFV45272.1| GTP-binding protein YchF [Bilophila wadsworthia 3_1_6] Length = 366 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 IGI+GLPN GKST ++T+A+ + A+YPF T+ PN V Sbjct: 5 IGIVGLPNVGKSTLFNALTKAQNAQAANYPFCTIEPNKATVPVPDRRIDALVDLVHPQKT 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 +FI DI G+++ A +G G+G++FL + +L +V E++ Sbjct: 65 INATVDFI--DIAGLVRGASKGEGLGNQFLGNIRECAAILEVVRCFEDD 111 >gi|213420899|ref|ZP_03353965.1| GTPase ObgE [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 180 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 5/96 (5%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL----EENVQAAYQCILDELSAY 265 +ADIPG+I+ A +GAG+G RFLKH ER VLLH++ + V+ A + I+ EL Y Sbjct: 1 MADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGSDPVENA-RIIIGELEKY 59 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 + +L K + ++ID +D K +A G Sbjct: 60 SQDLAAKPRWLVFNKIDLMDKSEAEEKAKAIAEALG 95 >gi|149191622|ref|ZP_01869866.1| GTPase ObgE [Vibrio shilonii AK1] gi|148834522|gb|EDL51515.1| GTPase ObgE [Vibrio shilonii AK1] Length = 190 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 7/132 (5%) Query: 198 LGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL---EENVQAA 254 +G+V E K F++ADIP +I++A AG+ RFLKH ER VLLH++ + + N Sbjct: 3 VGVVPE--KSFVVADIPRLIESAADSAGLSIRFLKHLERCRVLLHMIDIMPIDQSNPIEN 60 Query: 255 YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITG 312 I+DEL Y+ +L K + +++D + + E+ G F+ S++ Sbjct: 61 ALTIIDELEQYSEKLADKPRWLVFNKVDLMPEEEANEVIQEILDALGWEDEYFKISAVNK 120 Query: 313 HGIPQILECLHD 324 G ++ L D Sbjct: 121 QGTKELCYKLAD 132 >gi|242020817|ref|XP_002430847.1| Nucleolar GTP-binding protein, putative [Pediculus humanus corporis] gi|212516058|gb|EEB18109.1| Nucleolar GTP-binding protein, putative [Pediculus humanus corporis] Length = 583 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 12/178 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ +TRA ++ Y FTT LG Y + + D PGI+ + Sbjct: 171 IILCGFPNVGKSSFMNKITRADVEVQPYAFTTKSLYLGHTDYKYLRWQIIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + +R + + L+H+ SA+ + + QC ++LS + S K I Sbjct: 230 ----LEERNIIEMQAVTALVHLRSAVVYIMDPSEQCGYSFEEQLSLFESIKPLFVNKPLI 285 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIRGE 332 V L++ D V L+ ++ EL + G +P E S+ G+ ++ +K+ R E Sbjct: 286 VVLNKCDIVKKTDLSPERQELLAKLGDIPIMEMSAANEIGVAEVKIEACEKLLQYRVE 343 >gi|115523458|ref|YP_780369.1| GTP-dependent nucleic acid-binding protein EngD [Rhodopseudomonas palustris BisA53] gi|115517405|gb|ABJ05389.1| GTP-binding protein YchF [Rhodopseudomonas palustris BisA53] Length = 387 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLG-----------IVKEGYKEFIL 210 GI+GLPN GKST ++T A + A+YPF T+ PN+G + G I+ Sbjct: 28 GIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGEVAVPDPRLDKLAAAGKSAQII 87 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + H+V E++ Sbjct: 88 PTRLTFVDIAGLVKGASKGEGLGNQFLATIREVDAIAHVVRCFEDS 133 >gi|15804762|ref|NP_290803.1| putative GTPase HflX [Escherichia coli O157:H7 EDL933] gi|15834403|ref|NP_313176.1| GTPase HflX [Escherichia coli O157:H7 str. Sakai] gi|74314658|ref|YP_313077.1| putative GTPase HflX [Shigella sonnei Ss046] gi|157155239|ref|YP_001465671.1| putative GTPase HflX [Escherichia coli E24377A] gi|157163636|ref|YP_001460954.1| putative GTPase HflX [Escherichia coli HS] gi|168751477|ref|ZP_02776499.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC4113] gi|168754742|ref|ZP_02779749.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC4401] gi|168766450|ref|ZP_02791457.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC4486] gi|168774116|ref|ZP_02799123.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC4196] gi|168780603|ref|ZP_02805610.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC4076] gi|168784808|ref|ZP_02809815.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC869] gi|168801826|ref|ZP_02826833.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC508] gi|170021817|ref|YP_001726771.1| putative GTPase HflX [Escherichia coli ATCC 8739] gi|170681964|ref|YP_001746568.1| putative GTPase HflX [Escherichia coli SMS-3-5] gi|188496314|ref|ZP_03003584.1| GTP-binding protein HflX [Escherichia coli 53638] gi|191165587|ref|ZP_03027427.1| GTP-binding protein HflX [Escherichia coli B7A] gi|193066018|ref|ZP_03047076.1| GTP-binding protein HflX [Escherichia coli E22] gi|193070873|ref|ZP_03051805.1| GTP-binding protein HflX [Escherichia coli E110019] gi|194426608|ref|ZP_03059162.1| GTP-binding protein HflX [Escherichia coli B171] gi|194434600|ref|ZP_03066857.1| GTP-binding protein HflX [Shigella dysenteriae 1012] gi|194439513|ref|ZP_03071587.1| GTP-binding protein HflX [Escherichia coli 101-1] gi|195935963|ref|ZP_03081345.1| putative GTPase HflX [Escherichia coli O157:H7 str. EC4024] gi|208807477|ref|ZP_03249814.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC4206] gi|208813758|ref|ZP_03255087.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC4045] gi|208819504|ref|ZP_03259824.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC4042] gi|209396581|ref|YP_002273715.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC4115] gi|209921661|ref|YP_002295745.1| putative GTPase HflX [Escherichia coli SE11] gi|217325358|ref|ZP_03441442.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. TW14588] gi|218551443|ref|YP_002385235.1| GTPase HflX [Escherichia fergusonii ATCC 35469] gi|218556725|ref|YP_002389639.1| putative GTPase HflX [Escherichia coli IAI1] gi|218697922|ref|YP_002405589.1| putative GTPase HflX [Escherichia coli 55989] gi|218702870|ref|YP_002410499.1| putative GTPase HflX [Escherichia coli IAI39] gi|218707784|ref|YP_002415303.1| putative GTPase HflX [Escherichia coli UMN026] gi|253775202|ref|YP_003038033.1| GTPase HflX [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254037187|ref|ZP_04871264.1| GTP-binding protein HflX [Escherichia sp. 1_1_43] gi|254164102|ref|YP_003047210.1| putative GTPase HflX [Escherichia coli B str. REL606] gi|254796192|ref|YP_003081029.1| putative GTPase HflX [Escherichia coli O157:H7 str. TW14359] gi|256019818|ref|ZP_05433683.1| putative GTPase HflX [Shigella sp. D9] gi|256025108|ref|ZP_05438973.1| putative GTPase HflX [Escherichia sp. 4_1_40B] gi|260847003|ref|YP_003224781.1| putative GTPase HflX [Escherichia coli O103:H2 str. 12009] gi|260870919|ref|YP_003237321.1| putative GTPase HflX [Escherichia coli O111:H- str. 11128] gi|261225293|ref|ZP_05939574.1| predicted GTPase [Escherichia coli O157:H7 str. FRIK2000] gi|261255455|ref|ZP_05947988.1| putative GTPase HflX [Escherichia coli O157:H7 str. FRIK966] gi|291285585|ref|YP_003502403.1| GTP-binding protein HflX [Escherichia coli O55:H7 str. CB9615] gi|293402800|ref|ZP_06646897.1| GTPase HflX [Escherichia coli FVEC1412] gi|293407900|ref|ZP_06651740.1| GTP-binding protein HflX [Escherichia coli B354] gi|293417676|ref|ZP_06660298.1| GTP-binding protein HflX [Escherichia coli B185] gi|293476484|ref|ZP_06664892.1| GTP-binding protein HflX [Escherichia coli B088] gi|297517575|ref|ZP_06935961.1| putative GTPase HflX [Escherichia coli OP50] gi|298378330|ref|ZP_06988214.1| GTP-binding protein HflX [Escherichia coli FVEC1302] gi|300816527|ref|ZP_07096748.1| GTP-binding protein HflX [Escherichia coli MS 107-1] gi|300821264|ref|ZP_07101412.1| GTP-binding protein HflX [Escherichia coli MS 119-7] gi|300899711|ref|ZP_07117937.1| GTP-binding protein HflX [Escherichia coli MS 198-1] gi|300906002|ref|ZP_07123726.1| GTP-binding protein HflX [Escherichia coli MS 84-1] gi|300920803|ref|ZP_07137204.1| GTP-binding protein HflX [Escherichia coli MS 115-1] gi|300922421|ref|ZP_07138541.1| GTP-binding protein HflX [Escherichia coli MS 182-1] gi|300929280|ref|ZP_07144756.1| GTP-binding protein HflX [Escherichia coli MS 187-1] gi|300940660|ref|ZP_07155221.1| GTP-binding protein HflX [Escherichia coli MS 21-1] gi|300949132|ref|ZP_07163174.1| GTP-binding protein HflX [Escherichia coli MS 116-1] gi|300957832|ref|ZP_07170010.1| GTP-binding protein HflX [Escherichia coli MS 175-1] gi|301023429|ref|ZP_07187212.1| GTP-binding protein HflX [Escherichia coli MS 69-1] gi|301027995|ref|ZP_07191279.1| GTP-binding protein HflX [Escherichia coli MS 196-1] gi|301302589|ref|ZP_07208719.1| GTP-binding protein HflX [Escherichia coli MS 124-1] gi|301325936|ref|ZP_07219357.1| GTP-binding protein HflX [Escherichia coli MS 78-1] gi|301646618|ref|ZP_07246484.1| GTP-binding protein HflX [Escherichia coli MS 146-1] gi|307140867|ref|ZP_07500223.1| putative GTPase HflX [Escherichia coli H736] gi|307314879|ref|ZP_07594471.1| GTP-binding proten HflX [Escherichia coli W] gi|309796984|ref|ZP_07691384.1| GTP-binding protein HflX [Escherichia coli MS 145-7] gi|312965846|ref|ZP_07780072.1| GTP-binding proten HflX [Escherichia coli 2362-75] gi|312974019|ref|ZP_07788190.1| GTP-binding proten HflX [Escherichia coli 1827-70] gi|331644920|ref|ZP_08346037.1| GTP-binding protein HflX [Escherichia coli H736] gi|331656001|ref|ZP_08356989.1| GTP-binding protein HflX [Escherichia coli M718] gi|331665837|ref|ZP_08366731.1| GTP-binding protein HflX [Escherichia coli TA143] gi|331671078|ref|ZP_08371911.1| GTP-binding protein HflX [Escherichia coli TA271] gi|331680303|ref|ZP_08380962.1| GTP-binding protein HflX [Escherichia coli H591] gi|331681192|ref|ZP_08381829.1| GTP-binding protein HflX [Escherichia coli H299] gi|332280957|ref|ZP_08393370.1| GTP-binding protein HflX [Shigella sp. D9] gi|12519158|gb|AAG59369.1|AE005650_8 GTP - binding subunit of protease specific for phage lambda cII repressor [Escherichia coli O157:H7 str. EDL933] gi|13364626|dbj|BAB38572.1| GTP - binding subunit of protease specific for phage lambda cII repressor [Escherichia coli O157:H7 str. Sakai] gi|73858135|gb|AAZ90842.1| GTP-binding subunit of protease specific for phage lambda cII repressor [Shigella sonnei Ss046] gi|157069316|gb|ABV08571.1| GTP-binding protein HflX [Escherichia coli HS] gi|157077269|gb|ABV16977.1| GTP-binding protein HflX [Escherichia coli E24377A] gi|169756745|gb|ACA79444.1| GTP-binding proten HflX [Escherichia coli ATCC 8739] gi|170519682|gb|ACB17860.1| GTP-binding protein HflX [Escherichia coli SMS-3-5] gi|187770244|gb|EDU34088.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC4196] gi|188014507|gb|EDU52629.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC4113] gi|188491513|gb|EDU66616.1| GTP-binding protein HflX [Escherichia coli 53638] gi|189001638|gb|EDU70624.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC4076] gi|189357854|gb|EDU76273.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC4401] gi|189364080|gb|EDU82499.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC4486] gi|189374971|gb|EDU93387.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC869] gi|189376070|gb|EDU94486.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC508] gi|190904282|gb|EDV63991.1| GTP-binding protein HflX [Escherichia coli B7A] gi|192926341|gb|EDV80977.1| GTP-binding protein HflX [Escherichia coli E22] gi|192955819|gb|EDV86290.1| GTP-binding protein HflX [Escherichia coli E110019] gi|194415347|gb|EDX31615.1| GTP-binding protein HflX [Escherichia coli B171] gi|194417185|gb|EDX33297.1| GTP-binding protein HflX [Shigella dysenteriae 1012] gi|194421512|gb|EDX37525.1| GTP-binding protein HflX [Escherichia coli 101-1] gi|208727278|gb|EDZ76879.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC4206] gi|208735035|gb|EDZ83722.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC4045] gi|208739627|gb|EDZ87309.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC4042] gi|209157981|gb|ACI35414.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC4115] gi|209750268|gb|ACI73441.1| GTP - binding subunit of protease specific for phage lambda cII repressor [Escherichia coli] gi|209750270|gb|ACI73442.1| GTP - binding subunit of protease specific for phage lambda cII repressor [Escherichia coli] gi|209750272|gb|ACI73443.1| GTP - binding subunit of protease specific for phage lambda cII repressor [Escherichia coli] gi|209750274|gb|ACI73444.1| GTP - binding subunit of protease specific for phage lambda cII repressor [Escherichia coli] gi|209750276|gb|ACI73445.1| GTP - binding subunit of protease specific for phage lambda cII repressor [Escherichia coli] gi|209914920|dbj|BAG79994.1| hypothetical phage protein [Escherichia coli SE11] gi|217321579|gb|EEC30003.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. TW14588] gi|218354654|emb|CAV01646.1| putative GTPase [Escherichia coli 55989] gi|218358985|emb|CAQ91645.1| putative GTPase [Escherichia fergusonii ATCC 35469] gi|218363494|emb|CAR01148.1| putative GTPase [Escherichia coli IAI1] gi|218372856|emb|CAR20736.1| putative GTPase [Escherichia coli IAI39] gi|218434881|emb|CAR15819.1| putative GTPase [Escherichia coli UMN026] gi|226840293|gb|EEH72295.1| GTP-binding protein HflX [Escherichia sp. 1_1_43] gi|242379695|emb|CAQ34519.1| GTPase associated with the 50S subunit of the ribosome [Escherichia coli BL21(DE3)] gi|253326246|gb|ACT30848.1| GTP-binding proten HflX [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253976003|gb|ACT41674.1| predicted GTPase [Escherichia coli B str. REL606] gi|253980159|gb|ACT45829.1| predicted GTPase [Escherichia coli BL21(DE3)] gi|254595592|gb|ACT74953.1| predicted GTPase [Escherichia coli O157:H7 str. TW14359] gi|257762150|dbj|BAI33647.1| predicted GTPase HflX [Escherichia coli O103:H2 str. 12009] gi|257767275|dbj|BAI38770.1| predicted GTPase HflX [Escherichia coli O111:H- str. 11128] gi|284924355|emb|CBG37471.1| GTP-binding protein [Escherichia coli 042] gi|290765458|gb|ADD59419.1| GTP-binding protein HflX [Escherichia coli O55:H7 str. CB9615] gi|291320937|gb|EFE60379.1| GTP-binding protein HflX [Escherichia coli B088] gi|291429715|gb|EFF02729.1| GTPase HflX [Escherichia coli FVEC1412] gi|291430394|gb|EFF03392.1| GTP-binding protein HflX [Escherichia coli B185] gi|291472151|gb|EFF14633.1| GTP-binding protein HflX [Escherichia coli B354] gi|298280664|gb|EFI22165.1| GTP-binding protein HflX [Escherichia coli FVEC1302] gi|299878905|gb|EFI87116.1| GTP-binding protein HflX [Escherichia coli MS 196-1] gi|300315463|gb|EFJ65247.1| GTP-binding protein HflX [Escherichia coli MS 175-1] gi|300356722|gb|EFJ72592.1| GTP-binding protein HflX [Escherichia coli MS 198-1] gi|300397016|gb|EFJ80554.1| GTP-binding protein HflX [Escherichia coli MS 69-1] gi|300402169|gb|EFJ85707.1| GTP-binding protein HflX [Escherichia coli MS 84-1] gi|300412226|gb|EFJ95536.1| GTP-binding protein HflX [Escherichia coli MS 115-1] gi|300421240|gb|EFK04551.1| GTP-binding protein HflX [Escherichia coli MS 182-1] gi|300451380|gb|EFK15000.1| GTP-binding protein HflX [Escherichia coli MS 116-1] gi|300454548|gb|EFK18041.1| GTP-binding protein HflX [Escherichia coli MS 21-1] gi|300462773|gb|EFK26266.1| GTP-binding protein HflX [Escherichia coli MS 187-1] gi|300526153|gb|EFK47222.1| GTP-binding protein HflX [Escherichia coli MS 119-7] gi|300530757|gb|EFK51819.1| GTP-binding protein HflX [Escherichia coli MS 107-1] gi|300842114|gb|EFK69874.1| GTP-binding protein HflX [Escherichia coli MS 124-1] gi|300847289|gb|EFK75049.1| GTP-binding protein HflX [Escherichia coli MS 78-1] gi|301075165|gb|EFK89971.1| GTP-binding protein HflX [Escherichia coli MS 146-1] gi|306905682|gb|EFN36211.1| GTP-binding proten HflX [Escherichia coli W] gi|308119397|gb|EFO56659.1| GTP-binding protein HflX [Escherichia coli MS 145-7] gi|309704678|emb|CBJ04028.1| GTP-binding protein [Escherichia coli ETEC H10407] gi|310331553|gb|EFP98809.1| GTP-binding proten HflX [Escherichia coli 1827-70] gi|312289089|gb|EFR16983.1| GTP-binding proten HflX [Escherichia coli 2362-75] gi|315063487|gb|ADT77814.1| predicted GTPase [Escherichia coli W] gi|315255517|gb|EFU35485.1| GTP-binding protein HflX [Escherichia coli MS 85-1] gi|320180686|gb|EFW55613.1| GTP-binding protein HflX [Shigella boydii ATCC 9905] gi|320190695|gb|EFW65345.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. EC1212] gi|320193553|gb|EFW68190.1| GTP-binding protein HflX [Escherichia coli WV_060327] gi|320200697|gb|EFW75283.1| GTP-binding protein HflX [Escherichia coli EC4100B] gi|320638931|gb|EFX08577.1| GTPase HflX [Escherichia coli O157:H7 str. G5101] gi|320644300|gb|EFX13365.1| GTPase HflX [Escherichia coli O157:H- str. 493-89] gi|320649618|gb|EFX18142.1| GTPase HflX [Escherichia coli O157:H- str. H 2687] gi|320655014|gb|EFX22975.1| GTPase HflX [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660521|gb|EFX27982.1| GTPase HflX [Escherichia coli O55:H7 str. USDA 5905] gi|320665790|gb|EFX32827.1| GTPase HflX [Escherichia coli O157:H7 str. LSU-61] gi|323161962|gb|EFZ47834.1| GTP-binding proten HflX [Escherichia coli E128010] gi|323166655|gb|EFZ52413.1| GTP-binding proten HflX [Shigella sonnei 53G] gi|323171605|gb|EFZ57251.1| GTP-binding proten HflX [Escherichia coli LT-68] gi|323182279|gb|EFZ67689.1| GTP-binding proten HflX [Escherichia coli 1357] gi|323380434|gb|ADX52702.1| GTP-binding proten HflX [Escherichia coli KO11] gi|323935403|gb|EGB31747.1| GTP-binding protein HflX [Escherichia coli E1520] gi|323940092|gb|EGB36286.1| GTP-binding protein HflX [Escherichia coli E482] gi|323946021|gb|EGB42058.1| GTP-binding protein HflX [Escherichia coli H120] gi|323960322|gb|EGB55962.1| GTP-binding protein HflX [Escherichia coli H489] gi|323965559|gb|EGB61013.1| GTP-binding protein HflX [Escherichia coli M863] gi|323970572|gb|EGB65831.1| GTP-binding protein HflX [Escherichia coli TA007] gi|323975486|gb|EGB70587.1| GTP-binding protein HflX [Escherichia coli TW10509] gi|324005236|gb|EGB74455.1| GTP-binding protein HflX [Escherichia coli MS 57-2] gi|324019351|gb|EGB88570.1| GTP-binding protein HflX [Escherichia coli MS 117-3] gi|324112230|gb|EGC06208.1| GTP-binding protein HflX [Escherichia fergusonii B253] gi|324118738|gb|EGC12630.1| GTP-binding protein HflX [Escherichia coli E1167] gi|325499709|gb|EGC97568.1| putative GTPase HflX [Escherichia fergusonii ECD227] gi|326345495|gb|EGD69238.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. 1125] gi|326346648|gb|EGD70382.1| GTP-binding protein HflX [Escherichia coli O157:H7 str. 1044] gi|327250113|gb|EGE61832.1| GTP-binding proten HflX [Escherichia coli STEC_7v] gi|331035895|gb|EGI08133.1| GTP-binding protein HflX [Escherichia coli H736] gi|331046355|gb|EGI18445.1| GTP-binding protein HflX [Escherichia coli M718] gi|331056888|gb|EGI28882.1| GTP-binding protein HflX [Escherichia coli TA143] gi|331061667|gb|EGI33593.1| GTP-binding protein HflX [Escherichia coli TA271] gi|331071766|gb|EGI43102.1| GTP-binding protein HflX [Escherichia coli H591] gi|331081413|gb|EGI52574.1| GTP-binding protein HflX [Escherichia coli H299] gi|332083711|gb|EGI88929.1| GTP-binding proten HflX [Shigella dysenteriae 155-74] gi|332103309|gb|EGJ06655.1| GTP-binding protein HflX [Shigella sp. D9] gi|332346250|gb|AEE59584.1| GTP-binding protein HflX [Escherichia coli UMNK88] gi|333010321|gb|EGK29754.1| GTP-binding proten HflX [Shigella flexneri VA-6] gi|333011155|gb|EGK30569.1| GTP-binding proten HflX [Shigella flexneri K-272] gi|333012650|gb|EGK32030.1| GTP-binding proten HflX [Shigella flexneri K-227] Length = 426 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A ++EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV-NTVLEEIDAH------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI L ++ +D + + + + S+ TG GIPQ+ + L +++ Sbjct: 309 -EIPTLLVMNKIDMLEDFEPRIDRDEENKPIRVWLSAQTGAGIPQLFQALTERL 361 >gi|146420262|ref|XP_001486088.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC 6260] Length = 459 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 26/111 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 I ++G P++GKST L ++T A K+ +PFTT+ PN Sbjct: 55 IALVGKPSSGKSTTLNALTDANAKVGAFPFTTIDPNKATGYLEVECACSRFGKQKLCKPN 114 Query: 198 LGIVKEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G + G + +L D+ G++ NAH G G+G++FL L+HIV A Sbjct: 115 YGYCRNGKRGVPVMLLDVAGLVPNAHLGRGLGNKFLGDLTEADCLIHIVDA 165 >gi|312136387|ref|YP_004003724.1| gtp-binding conserved hypothetical protein tigr00650 [Methanothermus fervidus DSM 2088] gi|311224106|gb|ADP76962.1| GTP-binding conserved hypothetical protein TIGR00650 [Methanothermus fervidus DSM 2088] Length = 396 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------------------- 200 I + G PN GKSTF ++ T + ++A YPFTT+ PN + Sbjct: 4 IAVTGKPNVGKSTFFSAATLSDVEVASYPFTTIDPNRAVAYVTTQCPCKELGLKCNPRNS 63 Query: 201 -VKEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 K G Y L D+ G++ A++G G+G++FL + + +HIV A Sbjct: 64 KCKNGIRYIPIELIDVAGLVPGAYKGRGLGNKFLDDLRQADMFIHIVDA 112 >gi|24115528|ref|NP_710038.1| putative GTPase HflX [Shigella flexneri 2a str. 301] gi|30065545|ref|NP_839716.1| putative GTPase HflX [Shigella flexneri 2a str. 2457T] gi|24054856|gb|AAN45745.1| GTP-binding subunit of protease specific for phage lambda cII repressor [Shigella flexneri 2a str. 301] gi|30043809|gb|AAP19528.1| GTP-binding subunit of protease specific for phage lambda cII repressor [Shigella flexneri 2a str. 2457T] gi|281603635|gb|ADA76619.1| GTP-binding subunit of protease specific for phage lambda cII repressor [Shigella flexneri 2002017] gi|313646352|gb|EFS10814.1| GTP-binding proten HflX [Shigella flexneri 2a str. 2457T] gi|332749049|gb|EGJ79472.1| GTP-binding proten HflX [Shigella flexneri K-671] gi|332749318|gb|EGJ79739.1| GTP-binding proten HflX [Shigella flexneri 4343-70] gi|332761879|gb|EGJ92153.1| GTP-binding proten HflX [Shigella flexneri 2747-71] gi|332763221|gb|EGJ93464.1| GTP-binding proten HflX [Shigella flexneri 2930-71] gi|333011969|gb|EGK31354.1| GTP-binding proten HflX [Shigella flexneri K-304] Length = 426 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A ++EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV-NTVLEEIDAH------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI L ++ +D + + + + S+ TG GIPQ+ + L +++ Sbjct: 309 -EIPTLLVMNKIDMLEDFEPRIDRDEENKPIRVWLSAQTGAGIPQLFQALTERL 361 >gi|323213174|gb|EFZ97976.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] Length = 403 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 174 VPTVSLVGYTNAGKSTLFNQITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 233 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH+V A ++EN++A +L+E+ A+ Sbjct: 234 RHLPHDLVAAFKATLQETRQATLLLHVVDAADVRVQENIEAV-NTVLEEIDAHEIPT--- 289 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++E + + S+ +G GIPQ+ + L +++ Sbjct: 290 --LMVMNKIDMLDDFEPRIDRDE---ENKPIRVWLSAQSGVGIPQLFQALTERL 338 >gi|89269049|emb|CAJ81597.1| developmentally regulated GTP binding protein 2 [Xenopus (Silurana) tropicalis] Length = 364 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 13/119 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A QG G G + + + V++ ++ A + VQ S L K++E VG+ Sbjct: 123 AAQGKGRGRQVIAVARTSDVVIMMLDATKGEVQ-------------RSLLEKELESVGI 168 >gi|55742027|ref|NP_001006840.1| developmentally regulated GTP binding protein 2 [Xenopus (Silurana) tropicalis] gi|49903487|gb|AAH76919.1| developmentally regulated GTP binding protein 2 [Xenopus (Silurana) tropicalis] Length = 364 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 13/119 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A QG G G + + + V++ ++ A + VQ S L K++E VG+ Sbjct: 123 AAQGKGRGRQVIAVARTSDVVIMMLDATKGEVQ-------------RSLLEKELESVGI 168 >gi|237842941|ref|XP_002370768.1| GTP binding protein, putative [Toxoplasma gondii ME49] gi|211968432|gb|EEB03628.1| GTP binding protein, putative [Toxoplasma gondii ME49] gi|221482084|gb|EEE20445.1| conserved hypothetical protein [Toxoplasma gondii GT1] gi|221502533|gb|EEE28260.1| GTP binding protein, putative [Toxoplasma gondii VEG] Length = 396 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 17/120 (14%) Query: 147 GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKE 203 +EKI+ + K +G++GLPN GKST + + +YPF T+ P+ + + + Sbjct: 9 AEEKILLGRPKNTLKMGLVGLPNVGKSTTFNLLCKQAVPAENYPFCTIDPHEARMNVPDD 68 Query: 204 GYK--------------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 +K + DI G++ AH+G G+G+ FL H + + H+V A EE Sbjct: 69 RFKWLCTHFHPKSEVSATLAIFDIAGLVPGAHKGEGLGNAFLSHIQAVDGIYHVVRAFEE 128 >gi|322370033|ref|ZP_08044595.1| translation-associated GTPase [Haladaptatus paucihalophilus DX253] gi|320550369|gb|EFW92021.1| translation-associated GTPase [Haladaptatus paucihalophilus DX253] Length = 397 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 24/107 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL----------------------YPNLG 199 IG++G P+ GKSTF + T YPFTT+ P++G Sbjct: 5 IGLVGKPSVGKSTFFNAATMNDVPEGSYPFTTIDPSIGEAYARVECAAPEFDESCTPSVG 64 Query: 200 IVKEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 +EG Y L D+ G+I AH+G G+G++FL VL+H+V Sbjct: 65 FCEEGTRYVPTKLVDVAGLIPGAHEGKGLGNQFLTDLNEADVLVHVV 111 >gi|197102694|ref|NP_001127173.1| developmentally-regulated GTP-binding protein 2 [Pongo abelii] gi|55725633|emb|CAH89598.1| hypothetical protein [Pongo abelii] Length = 343 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 13/119 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A QG G G + + V++ ++ A + VQ S L K++E VG+ Sbjct: 123 ASQGKGRGRQVIAVARTADVVIMMLDATKGEVQ-------------RSLLEKELESVGI 168 >gi|148237846|ref|NP_001079983.1| developmentally regulated GTP binding protein 2 [Xenopus laevis] gi|34221970|dbj|BAC82378.1| developmentally regulated GTP-binding protein drg2 [Xenopus laevis] gi|35505538|gb|AAH57756.1| MGC69136 protein [Xenopus laevis] Length = 364 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 52/93 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + + V++ ++ A + VQ Sbjct: 123 ASQGKGRGRQVIAVARTSDVVIMMLDATKGEVQ 155 >gi|237729106|ref|ZP_04559587.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226908835|gb|EEH94753.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 426 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNQITEAQVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A ++EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADFRVQENIEAV-DTVLEEIDAHEIPT--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++E + + S+ TG GIPQ+ + L +++ Sbjct: 313 --LLVMNKIDMLDDFEPRIDRDE---ENKPIRVWVSAQTGIGIPQLFQALTERL 361 >gi|50291651|ref|XP_448258.1| hypothetical protein [Candida glabrata CBS 138] gi|49527570|emb|CAG61219.1| unnamed protein product [Candida glabrata] Length = 408 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 30/143 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IGI+G P++GKST L S+T A + +PFTT+ PN Sbjct: 7 IGIVGKPSSGKSTTLNSLTDASAAVGSFPFTTIEPNKATGYLQVDCACSRFGKEELCKPN 66 Query: 198 LGIVKEGYKEF--ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY 255 G ++G + +L D+ G++ AH G G+G++FL L+H+V Sbjct: 67 YGWCEKGKRHIPIMLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVVDVSGTTDAEGK 126 Query: 256 QC----ILDELSAYNSELRKKIE 274 C L+++ E+R IE Sbjct: 127 NCRGYDPLNDIEWLQDEIRLWIE 149 >gi|323176069|gb|EFZ61661.1| GTP-binding proten HflX [Escherichia coli 1180] Length = 426 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A ++EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV-NTVLEEIDAH------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI L ++ +D + + + + S+ TG GIPQ+ + L +++ Sbjct: 309 -EIPTLLVMNKIDMLEDFEPRIDRDEENKPIRVWLSAQTGAGIPQLFQALTERL 361 >gi|312068335|ref|XP_003137166.1| GTP-binding protein [Loa loa] gi|307767670|gb|EFO26904.1| GTP-binding protein [Loa loa] Length = 397 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 +GI+G+PN GKSTF +T+++ + ++PF T+ PN V F Sbjct: 25 MGILGVPNVGKSTFFNVLTKSQAQAENFPFCTIDPNESRVPVNDNRFDWLVQHFKPLSRV 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++ A +G G+G+ FL H L H+ A +++ Sbjct: 85 PAFLNVVDIAGLVSGASEGLGLGNAFLSHISACDALFHLCRAFDDD 130 >gi|2654192|gb|AAC33135.1| GTP-binding protein [Oncorhynchus tshawytscha] Length = 364 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 52/93 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTATASEAASYEFTTLTCIPGVIEYNGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + V++ ++ A + +VQ Sbjct: 123 ASQGKGRGRQVIAVARTADVVIMMLDATKGDVQ 155 >gi|292655758|ref|YP_003535655.1| GTP-binding protein [Haloferax volcanii DS2] gi|291370560|gb|ADE02787.1| GTP-binding protein [Haloferax volcanii DS2] Length = 391 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 20/105 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------------------KE 203 + + G PNAGKSTF + T A+ +A+YPFTT+ N G+ ++ Sbjct: 4 LALAGKPNAGKSTFYTASTLAEVDVANYPFTTIDANRGVTHARTRCPCLDRDERCGNCED 63 Query: 204 G--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G Y L D+ G++ AH+G G+G++FL ++++V A Sbjct: 64 GIRYVAVELVDVAGLVPGAHEGRGLGNQFLDELTNADAIVNVVDA 108 >gi|224070279|ref|XP_002188360.1| PREDICTED: developmentally regulated GTP binding protein 2 [Taeniopygia guttata] Length = 345 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 52/95 (54%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 44 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 103 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A QG G G + + V++ ++ A + VQ A Sbjct: 104 AAQGKGRGRQVIAVARTADVVIMMLDATKGEVQRA 138 >gi|326565839|gb|EGE16001.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella catarrhalis BC1] gi|326575634|gb|EGE25557.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella catarrhalis CO72] Length = 363 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 21/109 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKALAAIVNPERT 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V +++ Sbjct: 64 IPTSMEFV--DIAGLVAGASKGEGMGNQFLANIRETDAIAHVVRCFDDD 110 >gi|148260673|ref|YP_001234800.1| translation-associated GTPase [Acidiphilium cryptum JF-5] gi|326403867|ref|YP_004283949.1| GTP-binding protein [Acidiphilium multivorum AIU301] gi|146402354|gb|ABQ30881.1| GTP-binding protein YchF [Acidiphilium cryptum JF-5] gi|325050729|dbj|BAJ81067.1| GTP-binding protein [Acidiphilium multivorum AIU301] Length = 364 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 18/108 (16%) Query: 161 DIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLG-----------------IVK 202 + GI+GLPN GKST ++T + A+YPF T+ PN+G VK Sbjct: 4 NCGIVGLPNVGKSTLFNALTATVAAQAANYPFCTIEPNVGRVAVPDPRLDVLAKIGKSVK 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 64 TVPTSLEFVDIAGLVRGAAKGEGLGNQFLANIREVDAIIHVLRCFEDD 111 >gi|326564031|gb|EGE14275.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella catarrhalis 12P80B1] gi|326570494|gb|EGE20534.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella catarrhalis BC8] Length = 363 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 21/109 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKALAAIVNPERT 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V +++ Sbjct: 64 IPTSMEFV--DIAGLVAGASKGEGMGNQFLANIRETDAIAHVVRCFDDD 110 >gi|326560426|gb|EGE10808.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella catarrhalis 7169] gi|326561630|gb|EGE11967.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella catarrhalis 103P14B1] gi|326571177|gb|EGE21201.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella catarrhalis BC7] gi|326573468|gb|EGE23436.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella catarrhalis 101P30B1] gi|326577098|gb|EGE26992.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella catarrhalis O35E] Length = 363 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 21/109 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKALAAIVNPERT 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V +++ Sbjct: 64 IPTSMEFV--DIAGLVAGASKGEGMGNQFLANIRETDAIAHVVRCFDDD 110 >gi|124022580|ref|YP_001016887.1| GTP-dependent nucleic acid-binding protein EngD [Prochlorococcus marinus str. MIT 9303] gi|123962866|gb|ABM77622.1| probable GTP-binding protein [Prochlorococcus marinus str. MIT 9303] Length = 375 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V A+ + A++PF T+ PN+G V KE I Sbjct: 17 GIVGLPNVGKSTLFNALVANAQAQAANFPFCTIEPNVGSVAVPDERLQLLCDLSKSKELI 76 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 77 PTRMEFVDIAGLVKGASEGEGLGNKFLANIREVDAIVHVVRCFED 121 >gi|114668865|ref|XP_001158439.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes] Length = 343 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 13/119 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A QG G G + + V++ ++ A + VQ S L K++E VG+ Sbjct: 123 AAQGKGRGRQVIAVARTADVIIMMLDATKGEVQ-------------RSLLEKELESVGI 168 >gi|50311459|ref|XP_455754.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644890|emb|CAG98462.1| KLLA0F14993p [Kluyveromyces lactis] Length = 369 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 13/119 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+ L +T K +IA Y FTTL G++K E + D+PGII Sbjct: 65 ARVVLIGYPSVGKSSLLGKITSTKSEIAHYAFTTLTSVPGVLKYQGAEIQVVDLPGIIYG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A QG G G + + ++L ++ A + A+Q L K++E VG+ Sbjct: 125 ASQGKGRGRQVVSTARTADLILMVLDA----TKGAHQ---------RESLEKELEAVGI 170 >gi|284006627|emb|CBA71888.1| GTP-binding protein [Arsenophonus nasoniae] Length = 432 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 25/179 (13%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKS+ +T+++ AD F TL P L + + +LAD G I Sbjct: 199 IPTISLVGYTNAGKSSLFNQMTKSEVYAADQLFATLDPTLRRIDIDDVGAIVLADTVGFI 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T +LLH+V A +EEN+QA + +L+E+ A Sbjct: 259 RHLPHDLVAAFKATLQETREASLLLHVVDAVDNRMEENIQAV-ESVLEEIEAN------- 310 Query: 273 IEIVGLSQIDTVDS-----DTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI L ++ +D + R +N + + S+ TG GIP +L+ L +++ Sbjct: 311 -EIPALLVMNKIDMLNGFIPRIDRDENNVPIRVW-----LSAQTGEGIPLLLQALTERL 363 >gi|326562593|gb|EGE12904.1| GTP-dependent nucleic acid-binding protein EngD [Moraxella catarrhalis 46P47B1] Length = 363 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 21/109 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T+A ++PF T PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNTGIVPVPDPRLKALAAIVNPERT 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V +++ Sbjct: 64 IPTSMEFV--DIAGLVAGASKGEGMGNQFLANIRETDAIAHVVRCFDDD 110 >gi|332083170|gb|EGI88401.1| GTP-binding proten HflX [Shigella boydii 5216-82] Length = 426 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A ++EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV-NTVLEEIDAH------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI L ++ +D + + + + S+ TG GIPQ+ + L +++ Sbjct: 309 -EIPTLLVMNKIDMLEDFEPRIDRDEENKPIRVWLSAQTGAGIPQLFQALTERL 361 >gi|303326978|ref|ZP_07357420.1| GTP-binding protein YchF [Desulfovibrio sp. 3_1_syn3] gi|302862966|gb|EFL85898.1| GTP-binding protein YchF [Desulfovibrio sp. 3_1_syn3] Length = 366 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 19/109 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV-----------------KE 203 IGI+GLPN GKST ++T+A+ + A+YPF T+ PN V K Sbjct: 5 IGIVGLPNVGKSTLFNALTKAQNAQAANYPFCTIEPNKATVAVPDKRVDALTAKAKPQKT 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 + DI G+++ A +G G+G++FL ++ +V E EN+ Sbjct: 65 IHASVDFIDIAGLVRGASKGEGLGNQFLATIRECAAIVEVVRCFEDENI 113 >gi|294085758|ref|YP_003552518.1| hypothetical protein SAR116_2191 [Candidatus Puniceispirillum marinum IMCC1322] gi|292665333|gb|ADE40434.1| hypothetical protein SAR116_2191 [Candidatus Puniceispirillum marinum IMCC1322] Length = 366 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 18/108 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVKEGYKEF----ILA---- 211 + GI+GLPN GKST ++T+ A + A+YPF T+ PN G V +LA Sbjct: 4 NCGIVGLPNVGKSTLFNALTQTAAAEAANYPFCTIEPNTGRVSVPDSRLDELAVLAKSAT 63 Query: 212 ---------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A QG G+G++FL + H++ E+ Sbjct: 64 IIPTQLEFVDIAGLVRGASQGEGLGNKFLGTIREVDAIAHVLRCFEDT 111 >gi|194217775|ref|XP_001488286.2| PREDICTED: similar to Developmentally-regulated GTP-binding protein 2 (DRG 2) [Equus caballus] Length = 370 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 13/119 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 69 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 128 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A QG G G + + V++ ++ A + VQ S L K++E VG+ Sbjct: 129 AAQGKGRGRQVIAVARTADVVIMMLDATKGEVQ-------------RSLLEKELESVGI 174 >gi|134097557|ref|YP_001103218.1| GTP-dependent nucleic acid-binding protein EngD [Saccharopolyspora erythraea NRRL 2338] gi|291009181|ref|ZP_06567154.1| GTP-dependent nucleic acid-binding protein EngD [Saccharopolyspora erythraea NRRL 2338] gi|133910180|emb|CAM00293.1| GTP-binding protein YchF [Saccharopolyspora erythraea NRRL 2338] Length = 359 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF------------- 208 +GI+GLPN GKST ++T A+YPF T+ PN+G+V K Sbjct: 5 LGIVGLPNVGKSTLFNALTSNDVLEANYPFATIEPNVGVVPLPDKRLDKLAEVFESAKTV 64 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++K A +G G+G++FL + + ++ ++ Sbjct: 65 PATVSFVDIAGLVKGASEGQGLGNKFLANIREADAICQVIRVFDD 109 >gi|218885338|ref|YP_002434659.1| GTP-dependent nucleic acid-binding protein EngD [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756292|gb|ACL07191.1| GTP-binding protein YchF [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 366 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 IGI+GLPN GKST ++T+A+ + A+YPF T+ PN V Sbjct: 5 IGIVGLPNVGKSTLFNALTKAQNAEAANYPFCTIEPNKATVAVPDARIDKLTEMAKPQKT 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 +FI DI G+++ A +G G+G++FL + +L +V +EN+ Sbjct: 65 ISATVDFI--DIAGLVRGASKGEGLGNQFLANIRECAAILEVVRCFDDENI 113 >gi|110808091|ref|YP_691611.1| putative GTPase HflX [Shigella flexneri 5 str. 8401] gi|110617639|gb|ABF06306.1| GTP-binding protein hflX [Shigella flexneri 5 str. 8401] Length = 403 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 174 VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 233 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A ++EN++A +L+E+ A+ Sbjct: 234 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV-NTVLEEIDAH------- 285 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI L ++ +D + + + + S+ TG GIPQ+ + L +++ Sbjct: 286 -EIPTLLVMNKIDMLEDFEPRIDRDEENKPIRVWLSAQTGAGIPQLFQALTERL 338 >gi|145553341|ref|XP_001462345.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124430184|emb|CAK94972.1| unnamed protein product [Paramecium tetraurelia] Length = 389 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 +GI+G+ N GKST ++ + +YPF T+ PN V + FI Sbjct: 24 MGIVGMANVGKSTTFNTLCKLNVPAENYPFCTIDPNNAKVPVPDERFIKLCQIHKPKSEI 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 + DI G++ AH+G G+G+ FL H + + H+V A E ENV Sbjct: 84 QAVLSIVDIAGLVPGAHKGEGLGNAFLSHIKECDGIYHVVRAFEDENV 131 >gi|50286275|ref|XP_445566.1| hypothetical protein [Candida glabrata CBS 138] gi|49524871|emb|CAG58477.1| unnamed protein product [Candida glabrata] Length = 368 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+ L +T K +IA Y FTTL G++K E + D+PGII Sbjct: 64 ARVVLIGYPSVGKSSLLGKITSTKSEIAHYAFTTLTSVPGVLKYEGAEIQIVDLPGIIYG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A QG G G + + ++L ++ A + Q + + EL A L K+ Sbjct: 124 ASQGKGRGRQVVATARTADLVLMVLDATKSKHQR--ESLEKELEAVGIRLNKE 174 >gi|90422928|ref|YP_531298.1| GTP-dependent nucleic acid-binding protein EngD [Rhodopseudomonas palustris BisB18] gi|90104942|gb|ABD86979.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 365 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 18/100 (18%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLG-----------IVKEGYKEFIL 210 GI+GLPN GKST ++T A + A+YPF T+ PN+G + G I+ Sbjct: 6 GIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGEVAVPDPRLDKLAAAGKSAQII 65 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI G++K A +G G+G++FL T + H+V Sbjct: 66 PTRLTFVDIAGLVKGASKGEGLGNQFLATIRETDAIAHVV 105 >gi|333009349|gb|EGK28805.1| GTP-binding proten HflX [Shigella flexneri K-218] Length = 426 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A ++EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV-NTVLEEIDAH------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI L ++ +D + + + + S+ TG GIPQ+ + L +++ Sbjct: 309 -EIPTLLVMNKIDMLEDFEPRIDRDEENKPIRVWLSAQTGAGIPQLFQALTERL 361 >gi|271969667|ref|YP_003343863.1| GTP-binding protein YchF [Streptosporangium roseum DSM 43021] gi|270512842|gb|ACZ91120.1| GTP-binding protein YchF [Streptosporangium roseum DSM 43021] Length = 362 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 18/101 (17%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIV------KEGYKEFI----- 209 IGI+GLPN GKST ++T+ A A+YPF T+ PN+GIV E E Sbjct: 5 IGIVGLPNVGKSTLFNALTKTANALAANYPFATIEPNVGIVGVPDPRLEKLAEIFGSAKI 64 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI G+++ A +G G G++FL + T + ++ Sbjct: 65 LPAKVEFVDIAGLVRGASEGQGRGNQFLANIRETDAICQVI 105 >gi|89094727|ref|ZP_01167662.1| GTP-binding protein [Oceanospirillum sp. MED92] gi|89080981|gb|EAR60218.1| GTP-binding protein [Oceanospirillum sp. MED92] Length = 363 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 21/107 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------------------E 203 GI+GLPN GKST ++T+ ++PF T+ PN G V Sbjct: 6 GIVGLPNVGKSTLFNALTKNGIAAENFPFCTIEPNAGTVAMPDPRLDNLAAIVSPERVVP 65 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + H+V E++ Sbjct: 66 TAMEFV--DIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDD 110 >gi|33863425|ref|NP_894985.1| GTP-dependent nucleic acid-binding protein EngD [Prochlorococcus marinus str. MIT 9313] gi|33640874|emb|CAE21330.1| probable GTP-binding protein [Prochlorococcus marinus str. MIT 9313] Length = 363 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V A+ + A++PF T+ PN+G V KE I Sbjct: 5 GIVGLPNVGKSTLFNALVANAQAQAANFPFCTIEPNVGSVAVPDERLQLLCDLSKSKEMI 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++K A +G G+G++FL + ++H+V E+ Sbjct: 65 PTRMEFVDIAGLVKGASEGEGLGNKFLANIREVDAIVHVVRCFED 109 >gi|114053313|ref|NP_001040339.1| GTP binding protein [Bombyx mori] gi|95102558|gb|ABF51217.1| GTP binding protein [Bombyx mori] Length = 397 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 22/145 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +GI+G+PN GKSTF +T+++ ++PF T+ PN + + E Y Sbjct: 24 VGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPASKV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+++ A +G G+G+ FL H + + ++ A ++ +V + D Sbjct: 84 PAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRAFDDEDVIHVDGDVNPVRD 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVD 285 L ELR K E L I+ +D Sbjct: 144 -LETIAEELRLKDEEQLLQHIEKLD 167 >gi|58381374|ref|XP_311198.2| AGAP000672-PA [Anopheles gambiae str. PEST] gi|55243004|gb|EAA06828.2| AGAP000672-PA [Anopheles gambiae str. PEST] Length = 398 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 22/145 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+G+PN GKSTF +T++ ++PF T+ PN V F Sbjct: 24 IGIVGVPNVGKSTFFNVLTKSAAPAENFPFCTIDPNESRVPVPDARFDYLCEYHKPASKV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G++K A +G G+G+ FL H + H+ ++ +V+ + D Sbjct: 84 PAYLNVVDIAGLVKGAAEGQGLGNAFLSHISACDAIFHLCRGFDDPDVTHVEGEVDPVRD 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVD 285 LS + ELR K E + +D ++ Sbjct: 144 -LSIISEELRLKDEEKLMINLDKLE 167 >gi|326387362|ref|ZP_08208971.1| translation-associated GTPase [Novosphingobium nitrogenifigens DSM 19370] gi|326208018|gb|EGD58826.1| translation-associated GTPase [Novosphingobium nitrogenifigens DSM 19370] Length = 366 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T + + A+YPF T+ PN+G V G ++ I Sbjct: 6 GIVGLPNVGKSTLFNALTETQAAQAANYPFCTIEPNVGNVGVPDSRLDKLAEIAGSQKII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E + Sbjct: 66 PTQLGFVDIAGLVRGASKGEGLGNQFLGNIREVDAIVHVLRCFEND 111 >gi|309787677|ref|ZP_07682288.1| GTP-binding proten HflX [Shigella dysenteriae 1617] gi|308924427|gb|EFP69923.1| GTP-binding proten HflX [Shigella dysenteriae 1617] Length = 403 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 174 VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 233 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A ++EN++A +L+E+ A+ Sbjct: 234 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV-NTVLEEIDAHEIP---- 288 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID ++ ++E + + S+ TG GIPQ+ + L +++ Sbjct: 289 -TLLVMNKIDMLEDFEPCIDRDE---ENKPIRVWLSAQTGAGIPQLFQALTERL 338 >gi|27364695|ref|NP_760223.1| GTPase HflX [Vibrio vulnificus CMCP6] gi|37681254|ref|NP_935863.1| putative GTPase HflX [Vibrio vulnificus YJ016] gi|320155088|ref|YP_004187467.1| GTP-binding protein HflX [Vibrio vulnificus MO6-24/O] gi|27360840|gb|AAO09750.1| GTP-binding proten HflX [Vibrio vulnificus CMCP6] gi|37200005|dbj|BAC95834.1| GTP-binding protein HflX [Vibrio vulnificus YJ016] gi|319930400|gb|ADV85264.1| GTP-binding protein HflX [Vibrio vulnificus MO6-24/O] Length = 429 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 15/176 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L ++ ILAD G I Sbjct: 197 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIELADVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T+ +LLH+V A EN+QA + +L+E++A+ Sbjct: 257 RHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAVH-VVLEEINAH------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 EI L ++ +D+ R + E + S++ G GI + E L +++ S Sbjct: 309 -EIPTLVVMNKIDNMEDQRPRIERDDEGVPQVVWLSAMDGQGIDLLFEALTERLAS 363 >gi|10946678|ref|NP_067329.1| developmentally-regulated GTP-binding protein 2 [Mus musculus] gi|8928105|sp|Q9QXB9|DRG2_MOUSE RecName: Full=Developmentally-regulated GTP-binding protein 2; Short=DRG-2 gi|6688758|emb|CAB65258.1| GTP-binding protein [Mus musculus] gi|52221213|gb|AAH82564.1| Developmentally regulated GTP binding protein 2 [Mus musculus] gi|56205550|emb|CAI24081.1| developmentally regulated GTP binding protein 2 [Mus musculus] gi|149052834|gb|EDM04651.1| rCG32787 [Rattus norvegicus] Length = 364 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 13/119 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A QG G G + + V++ ++ A + +VQ S L K++E VG+ Sbjct: 123 AAQGRGRGRQVIAVARTADVVVMMLDATKGDVQ-------------RSLLEKELESVGI 168 >gi|12653443|gb|AAH00493.1| Developmentally regulated GTP binding protein 2 [Homo sapiens] gi|30582791|gb|AAP35622.1| developmentally regulated GTP binding protein 2 [Homo sapiens] gi|61359503|gb|AAX41728.1| developmentally regulated GTP binding protein 2 [synthetic construct] gi|123979730|gb|ABM81694.1| developmentally regulated GTP binding protein 2 [synthetic construct] gi|123994507|gb|ABM84855.1| developmentally regulated GTP binding protein 2 [synthetic construct] Length = 364 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 13/119 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A QG G G + + V++ ++ A + VQ S L K++E VG+ Sbjct: 123 AAQGKGRGRQVIAVARTADVIIMMLDATKGEVQ-------------RSLLEKELESVGI 168 >gi|4557537|ref|NP_001379.1| developmentally-regulated GTP-binding protein 2 [Homo sapiens] gi|1706518|sp|P55039|DRG2_HUMAN RecName: Full=Developmentally-regulated GTP-binding protein 2; Short=DRG-2 gi|577779|emb|CAA56730.1| GTP-binding protein [Homo sapiens] gi|119576073|gb|EAW55669.1| developmentally regulated GTP binding protein 2, isoform CRA_a [Homo sapiens] gi|189066615|dbj|BAG36162.1| unnamed protein product [Homo sapiens] Length = 364 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 13/119 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A QG G G + + V++ ++ A + VQ S L K++E VG+ Sbjct: 123 AAQGKGRGRQVIAVARTADVIIMMLDATKGEVQ-------------RSLLEKELESVGI 168 >gi|293340121|ref|XP_001076012.2| PREDICTED: developmentally regulated GTP binding protein 2-like [Rattus norvegicus] Length = 364 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 13/119 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A QG G G + + V++ ++ A + +VQ S L K++E VG+ Sbjct: 123 AAQGRGRGRQVIAVARTADVVVMMLDATKGDVQ-------------RSLLEKELESVGI 168 >gi|242017408|ref|XP_002429181.1| Developmentally-regulated GTP-binding protein, putative [Pediculus humanus corporis] gi|212514059|gb|EEB16443.1| Developmentally-regulated GTP-binding protein, putative [Pediculus humanus corporis] Length = 375 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+ +T + + A Y FTTL G+++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTLLSILTATESEAASYEFTTLTCIPGVIQYKGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A QG G G + + ++L ++ A +++VQ + EL + L KK Sbjct: 122 ASQGKGRGRQVIAVARTADLVLMMLDATKQDVQRVL--LEKELESVGIRLNKK 172 >gi|82779445|ref|YP_405794.1| putative GTPase HflX [Shigella dysenteriae Sd197] gi|81243593|gb|ABB64303.1| GTP-binding subunit of protease specific for phage lambda cII repressor [Shigella dysenteriae Sd197] Length = 426 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A ++EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV-NTVLEEIDAHEIPT--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID ++ ++E + + S+ TG GIPQ+ + L +++ Sbjct: 313 --LLVMNKIDMLEDFEPCIDRDE---ENKPIRVWLSAQTGAGIPQLFQALTERL 361 >gi|50309347|ref|XP_454681.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643816|emb|CAG99768.1| KLLA0E16237p [Kluyveromyces lactis] Length = 409 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IGI+G P++GKST L S+T A ++ +PFTT+ PN Sbjct: 7 IGIVGKPSSGKSTTLNSLTDASAQVGAFPFTTIEPNRATGYLQVNCACSRVGLQKLCKPN 66 Query: 198 LGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G + G + +L D+ G++ AH G G+G++FL L+H+V Sbjct: 67 YGWCENGLRHIPIMLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVV 115 >gi|289740165|gb|ADD18830.1| putative GTp-binding protein [Glossina morsitans morsitans] Length = 397 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFI---------- 209 IGI+G+PN GKSTF +T++ ++PF T+ PN V + +F+ Sbjct: 24 IGIVGVPNVGKSTFFNVLTKSAAPAENFPFCTIDPNESRVPVPDARFDFLCEYHKPLSKV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G++K A +G G+G+ FL H + H+ A ++ Sbjct: 84 PAYLNVVDIAGLVKGAAEGQGLGNAFLSHINACDAIFHLCRAFDD 128 >gi|30584259|gb|AAP36378.1| Homo sapiens developmentally regulated GTP binding protein 2 [synthetic construct] gi|61369560|gb|AAX43351.1| developmentally regulated GTP binding protein 2 [synthetic construct] gi|61369566|gb|AAX43352.1| developmentally regulated GTP binding protein 2 [synthetic construct] Length = 365 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 13/119 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A QG G G + + V++ ++ A + VQ S L K++E VG+ Sbjct: 123 AAQGKGRGRQVIAVARTADVIIMMLDATKGEVQ-------------RSLLEKELESVGI 168 >gi|260434517|ref|ZP_05788487.1| GTP-binding protein YchF [Synechococcus sp. WH 8109] gi|260412391|gb|EEX05687.1| GTP-binding protein YchF [Synechococcus sp. WH 8109] Length = 363 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST F A V A+ + A++PF T+ PN+G V Sbjct: 5 GIVGLPNVGKSTLFNALVANAQAQAANFPFCTIEPNVGTVAVPDERLDRLTELSKSQDTI 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QG G+G++FL + ++H++ E++ Sbjct: 65 PTRMEFV--DIAGLVKGASQGEGLGNKFLANIREVDAIVHVIRCFEDD 110 >gi|167042962|gb|ABZ07676.1| putative TGS domain protein [uncultured marine crenarchaeote HF4000_ANIW137N18] Length = 406 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 23/106 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVK-------EGYK------- 206 IG+ G N GKSTF ++ T +I D+PFTT+ PN+GI + +K Sbjct: 11 IGLFGKANVGKSTFFSAATEDFNAQIGDFPFTTIQPNVGIAYVSTTCACKHFKINHNNPL 70 Query: 207 -----EFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 FI L D+ G++ AH+G G+G++FL + +L+H+V Sbjct: 71 CISGIRFIPIKLIDVAGLVPGAHEGKGLGNQFLDDARQADMLIHVV 116 >gi|149192034|ref|ZP_01870261.1| predicted GTPase [Vibrio shilonii AK1] gi|148834135|gb|EDL51145.1| predicted GTPase [Vibrio shilonii AK1] Length = 429 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 15/176 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L ++ ILAD G I Sbjct: 197 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIQLADVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T+ +LLH+V A EN+QA + +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETQEADILLHVVDASDDRFRENIQAVHD-VLEEIDAHEVP---- 311 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 +V +++ID +D R + E + S++ G GI + E L +++ S Sbjct: 312 -SLVVMNKIDNLDGQ---RPRIERNDEGIPRAVWVSAMEGQGIELLFEALTERLAS 363 >gi|118382824|ref|XP_001024568.1| GTP-binding protein YchF containing protein [Tetrahymena thermophila] gi|89306335|gb|EAS04323.1| GTP-binding protein YchF containing protein [Tetrahymena thermophila SB210] Length = 382 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 28/144 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF------------- 208 +GI+GLPN GKST ++ +YPF T+ PNL V + F Sbjct: 23 MGIVGLPNVGKSTTFNLLSNLNIPAENYPFCTIDPNLAKVFVDDERFDKLCEIHKPKSKV 82 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAA 254 + DI G++ A +G G+G+ FL H T + H+V A ++ N Sbjct: 83 PATLSIMDIAGLVPGASKGEGLGNAFLSHIRETDAIYHVVRAFDDPEITHTENEVNPVRD 142 Query: 255 YQCILDELSAYNSE-LRKKIEIVG 277 Q I DEL + E L K++E V Sbjct: 143 MQIISDELVYKDQEILGKRLEEVN 166 >gi|33865238|ref|NP_896797.1| GTP-dependent nucleic acid-binding protein EngD [Synechococcus sp. WH 8102] gi|33638922|emb|CAE07219.1| probable GTP-binding protein [Synechococcus sp. WH 8102] Length = 363 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST F A V A+ + A++PF T+ PN+G V Sbjct: 5 GIVGLPNVGKSTLFNALVANAQAQAANFPFCTIEPNVGTVAVPDERLDQLTKLSSSIDTI 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QG G+G++FL + ++H++ E++ Sbjct: 65 PTRMEFV--DIAGLVKGASQGEGLGNKFLANIREVDAIVHVIRCFEDD 110 >gi|316965924|gb|EFV50560.1| developmentally-regulated GTP-binding protein 1 [Trichinella spiralis] Length = 430 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 68/124 (54%), Gaps = 4/124 (3%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L ++ ++A+Y FTTL G+++ + L D+PGII+ Sbjct: 60 ARIGFVGFPSVGKSTLLTNLAGVYSEVAEYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 119 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-ELSAYNSELRKKIEIVGL 278 A G G G + + RT L+ IV + + +Q ++CI++ EL + L K+ +G Sbjct: 120 AKDGKGRGRQVIA-VARTCNLILIVLDMLKPLQ--HKCIIEKELEGFGIRLNKQPPNIGF 176 Query: 279 SQID 282 + D Sbjct: 177 KKKD 180 >gi|299117244|emb|CBN75206.1| OLA1, Obg-like ATPase 1 (YchF-related GTPase) [Ectocarpus siliculosus] Length = 391 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV---KEGYKEFI--------- 209 +GI+G+PN GKS+F + + ++PF T+ PN+ IV + +K I Sbjct: 26 VGIVGVPNVGKSSFFNILGKMHVPAENFPFCTIDPNVAIVPVPDQRFKWLIKKYKPVSEV 85 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G++K A +GAG+G+ FL H + ++ A E+ Sbjct: 86 PPNMTITDIAGLVKGAAEGAGLGNAFLSHIRAVDAIFMMLRAFED 130 >gi|270011439|gb|EFA07887.1| hypothetical protein TcasGA2_TC005461 [Tribolium castaneum] Length = 348 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 53/93 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T+ + + A Y FTTL G++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTLLSTLTKTESEAASYEFTTLTCIPGVIDYNGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ A +++V Sbjct: 122 AAQGKGRGRQVIAVARTADLVLMMLDATKKDVH 154 >gi|94496342|ref|ZP_01302919.1| GTPase [Sphingomonas sp. SKA58] gi|94424088|gb|EAT09112.1| GTPase [Sphingomonas sp. SKA58] Length = 366 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLG-----------IVKEG------ 204 GI+GLPN GKST ++T + + A+YPF T+ PN G I K G Sbjct: 6 GIVGLPNVGKSTLFNALTETQAAQAANYPFCTIEPNEGRVAVPDDRLQTIAKIGGSAKII 65 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 ETQLSFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDD 111 >gi|88808999|ref|ZP_01124508.1| hypothetical protein WH7805_04886 [Synechococcus sp. WH 7805] gi|88786941|gb|EAR18099.1| hypothetical protein WH7805_04886 [Synechococcus sp. WH 7805] Length = 363 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST F A V A+ + A++PF T+ PN+G V Sbjct: 5 GIVGLPNVGKSTLFNALVANAQAQAANFPFCTIEPNVGTVAVPDSRLQLLSDLSSSAEII 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QG G+G++FL + ++H++ E++ Sbjct: 65 PTRMEFV--DIAGLVKGASQGEGLGNKFLANIREVDAIVHVIRCFEDD 110 >gi|330508185|ref|YP_004384613.1| GTP-binding/TGS domain-containing protein [Methanosaeta concilii GP-6] gi|328928993|gb|AEB68795.1| GTP-binding/TGS domain protein [Methanosaeta concilii GP-6] Length = 391 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 24/108 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------------------V 201 +G+ G PN+GKSTF + T + IA+YPFTT+ N G+ Sbjct: 4 VGLAGKPNSGKSTFFKAATLVEVDIANYPFTTIDANHGVSYVRVPCPCKDLGIEKGCGRC 63 Query: 202 KEGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 K+G + FI L D+ G++ +AH G G+G+ FL ++H++ A Sbjct: 64 KDGVR-FIAIELIDVAGLVPDAHLGKGLGNEFLDALRVAEAVIHVLDA 110 >gi|328472284|gb|EGF43154.1| GTPase HflX [Vibrio parahaemolyticus 10329] Length = 429 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 19/185 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L ++ ILAD G I Sbjct: 197 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKMELADVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T+ +LLH+V A EN+QA ++ +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAVHE-VLEEIDAHEVPT--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFSIR 330 +V +++ID ++S T +++E VP S++ G GI + + L +++ S Sbjct: 313 --LVVMNKIDNLESQTPRIERDEEG-----VPRAVWVSAMEGLGIELLFDALTERLASQM 365 Query: 331 GENEF 335 E++ Sbjct: 366 VEHQL 370 >gi|293351539|ref|XP_573102.3| PREDICTED: developmentally regulated GTP binding protein 2 [Rattus norvegicus] Length = 326 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 13/119 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A QG G G + + V++ ++ A + +VQ S L K++E VG+ Sbjct: 123 AAQGRGRGRQVIAVARTADVVVMMLDATKGDVQ-------------RSLLEKELESVGI 168 >gi|332881616|ref|ZP_08449264.1| GTP-binding protein YchF [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680255|gb|EGJ53204.1| GTP-binding protein YchF [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 367 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ +G + E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIDAQMGQITVPDERLNKLAELVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T ++H++ + + Sbjct: 66 ATCDIVDIAGLVKGASKGEGLGNQFLGNIRETDAIIHVLRCFDND 110 >gi|332374920|gb|AEE62601.1| unknown [Dendroctonus ponderosae] Length = 363 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 53/93 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T+ + + A Y FTTL G++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTLLSTLTKTESEAASYEFTTLTCIPGVIDYNGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ A +++V Sbjct: 122 AAQGKGRGRQVIAVARTADLVLMMLDATKKDVH 154 >gi|78213481|ref|YP_382260.1| translation-associated GTPase [Synechococcus sp. CC9605] gi|78197940|gb|ABB35705.1| conserved hypothetical protein [Synechococcus sp. CC9605] Length = 363 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V A+ + A++PF T+ PN+G V K+ I Sbjct: 5 GIVGLPNVGKSTLFNALVANAQAQAANFPFCTIEPNVGTVAVPDERLDRLTELSKSKDTI 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A QG G+G++FL + ++H++ E++ Sbjct: 65 PTRMGFVDIAGLVKGASQGEGLGNKFLANIREVDAIVHVIRCFEDD 110 >gi|315425471|dbj|BAJ47134.1| GTPase [Candidatus Caldiarchaeum subterraneum] Length = 407 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG------------------ 199 + IG+IG N GK+TF + T +++ YPFTT PN G Sbjct: 1 MTVRIGLIGKTNTGKTTFFNAATLQYAEVSTYPFTTKQPNYGTTYAITPCVCREFNVTDN 60 Query: 200 ----IVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 + +GY+ + D+PG+IK A G G+G++FL + L+H+V A Sbjct: 61 PRNSLCIDGYRHIPVEIIDLPGLIKGAWAGKGLGNQFLSVASQADALIHVVDA 113 >gi|148239951|ref|YP_001225338.1| translation-associated GTPase [Synechococcus sp. WH 7803] gi|147848490|emb|CAK24041.1| Predicted GTPase [Synechococcus sp. WH 7803] Length = 363 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 22/108 (20%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 GI+GLPN GKST F A V A+ + A++PF T+ PN+G V Sbjct: 5 GIVGLPNVGKSTLFNALVANAQAQAANFPFCTIEPNVGTVAVPDSRLELLSDLSSSAETI 64 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++K A QG G+G++FL + ++H++ E++ Sbjct: 65 PTRMEFV--DIAGLVKGASQGEGLGNKFLANIREVDAIVHVIRCFEDD 110 >gi|302306862|ref|NP_983268.2| ACL136Wp [Ashbya gossypii ATCC 10895] gi|299788721|gb|AAS51092.2| ACL136Wp [Ashbya gossypii ATCC 10895] Length = 409 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IGI+G P++GKST L S+T A + +PFTT+ PN Sbjct: 7 IGIVGKPSSGKSTTLNSLTDASAAVGAFPFTTIEPNRATGYLQVDCACSRFGKQSLCKPN 66 Query: 198 LGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G ++G + +L D+ G++ AH G G+G++FL + L+H+V Sbjct: 67 YGWCEDGKRHVPIMLLDVAGLVPGAHSGRGLGNKFLDDLRQADALIHVV 115 >gi|148241815|ref|YP_001226972.1| GTP-dependent nucleic acid-binding protein EngD [Synechococcus sp. RCC307] gi|147850125|emb|CAK27619.1| GTP-dependent nucleic acid-binding protein EngD (probable translation factor) [Synechococcus sp. RCC307] Length = 363 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V A+ + A++PF T+ PN+G V +E + Sbjct: 5 GIVGLPNVGKSTLFNALVANAQAQAANFPFCTIEPNVGTVSVPDERLQQLAELSSSQEIV 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ A QG G+G++FL + ++H+V E++ Sbjct: 65 PTRVEFVDIAGLVAGASQGEGLGNKFLANIREVDAIVHVVRCFEDD 110 >gi|16131995|ref|NP_418594.1| GTPase, stimulated by 50S subunit binding [Escherichia coli str. K-12 substr. MG1655] gi|89110893|ref|AP_004673.1| predicted GTPase [Escherichia coli str. K-12 substr. W3110] gi|170083619|ref|YP_001732939.1| GTPase [Escherichia coli str. K-12 substr. DH10B] gi|238903280|ref|YP_002929076.1| putative GTPase [Escherichia coli BW2952] gi|462264|sp|P25519|HFLX_ECOLI RecName: Full=GTP-binding protein hflX gi|436156|gb|AAC43398.1| putative GTPase required for high frequency lysogenization by bacteriophage lambda [Escherichia coli] gi|537014|gb|AAA97069.1| putative GTPase required for high frequency lysogenization by bacteriophage lambda; TTG start codon [Escherichia coli str. K-12 substr. MG1655] gi|1790615|gb|AAC77130.1| GTPase, stimulated by 50S subunit binding [Escherichia coli str. K-12 substr. MG1655] gi|85676924|dbj|BAE78174.1| predicted GTPase [Escherichia coli str. K12 substr. W3110] gi|169891454|gb|ACB05161.1| predicted GTPase [Escherichia coli str. K-12 substr. DH10B] gi|238862450|gb|ACR64448.1| predicted GTPase [Escherichia coli BW2952] gi|260451000|gb|ACX41422.1| GTP-binding proten HflX [Escherichia coli DH1] gi|315138727|dbj|BAJ45886.1| putative GTPase HflX [Escherichia coli DH1] Length = 426 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 19/176 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A ++EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV-NTVLEEIDAH------- 308 Query: 273 IEIVGLSQIDTVD--SDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI L ++ +D D R + + +V S+ TG GIPQ+ + L +++ Sbjct: 309 -EIPTLLVMNKIDMLEDFEPRIDRDEENKPNRV--WLSAQTGAGIPQLFQALTERL 361 >gi|257051338|ref|YP_003129171.1| small GTP-binding protein [Halorhabdus utahensis DSM 12940] gi|256690101|gb|ACV10438.1| small GTP-binding protein [Halorhabdus utahensis DSM 12940] Length = 370 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 5/115 (4%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST + ++T A + Y FTTL N G+++ L D+PG+I+ Sbjct: 62 ATVALVGFPSVGKSTLINALTNADSDVGSYDFTTLDVNPGMLQYNGANIQLLDVPGLIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 A G G G L ++L ++SA E +Q Y+ + +EL Y +++R ++ Sbjct: 122 AAGGRGDGKAVLSVVRTADLVLFVLSAFE--IQ-QYERLREEL--YKNKVRLDVD 171 >gi|281340454|gb|EFB16038.1| hypothetical protein PANDA_012270 [Ailuropoda melanoleuca] Length = 343 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 13/119 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 42 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 101 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A QG G G + + V++ ++ A + VQ S L K++E VG+ Sbjct: 102 AAQGKGRGRQVIAVARTADVVIMMLDATKGEVQ-------------RSLLEKELESVGI 147 >gi|91089351|ref|XP_972899.1| PREDICTED: similar to GA19430-PA [Tribolium castaneum] Length = 363 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 53/93 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T+ + + A Y FTTL G++ L D+PGII+ Sbjct: 62 ARVALIGFPSVGKSTLLSTLTKTESEAASYEFTTLTCIPGVIDYNGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ A +++V Sbjct: 122 AAQGKGRGRQVIAVARTADLVLMMLDATKKDVH 154 >gi|73956213|ref|XP_536661.2| PREDICTED: similar to Developmentally regulated GTP-binding protein 2 (DRG 2) [Canis familiaris] gi|109113506|ref|XP_001093568.1| PREDICTED: developmentally-regulated GTP-binding protein 2 isoform 2 [Macaca mulatta] gi|301775507|ref|XP_002923168.1| PREDICTED: developmentally-regulated GTP-binding protein 2-like [Ailuropoda melanoleuca] gi|332261719|ref|XP_003279915.1| PREDICTED: developmentally-regulated GTP-binding protein 2 [Nomascus leucogenys] Length = 364 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 13/119 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A QG G G + + V++ ++ A + VQ S L K++E VG+ Sbjct: 123 AAQGKGRGRQVIAVARTADVVIMMLDATKGEVQ-------------RSLLEKELESVGI 168 >gi|257387992|ref|YP_003177765.1| small GTP-binding protein [Halomicrobium mukohataei DSM 12286] gi|257170299|gb|ACV48058.1| small GTP-binding protein [Halomicrobium mukohataei DSM 12286] Length = 368 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 5/111 (4%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L ++T A+ + Y FTTL N G+++ + D+PG+I+ Sbjct: 61 ATVALVGFPSVGKSTLLNALTNAESETGSYEFTTLDVNPGMLQYRGANIQMLDVPGLIEG 120 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR 270 A G G G L +++ ++S E + YQ + DEL Y +++R Sbjct: 121 AAAGKGDGQAVLSVVRTADLIVFVLSVFEID---QYQRLSDEL--YKNKVR 166 >gi|147676804|ref|YP_001211019.1| hypothetical protein PTH_0469 [Pelotomaculum thermopropionicum SI] gi|146272901|dbj|BAF58650.1| hypothetical protein [Pelotomaculum thermopropionicum SI] Length = 328 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 4/57 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI--LADIPGI 216 + ++G PN GKS+ LA++TRA+PK+ADYPFTT P G++ Y++ + L D P + Sbjct: 82 VVLLGFPNTGKSSLLAAMTRARPKVADYPFTTTLPQAGMMP--YQDILIQLVDTPPV 136 >gi|126333792|ref|XP_001364445.1| PREDICTED: similar to GTP-binding protein [Monodelphis domestica] Length = 364 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 13/119 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A QG G G + + V++ ++ A + VQ S L K++E VG+ Sbjct: 123 AAQGKGRGRQVIAVARTADVVIMMLDATKGEVQ-------------RSLLEKELESVGI 168 >gi|87200137|ref|YP_497394.1| translation-associated GTPase [Novosphingobium aromaticivorans DSM 12444] gi|87135818|gb|ABD26560.1| conserved hypothetical protein 92 [Novosphingobium aromaticivorans DSM 12444] Length = 366 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T + + A+YPF T+ PN+G V G ++ I Sbjct: 6 GIVGLPNVGKSTLFNALTETQAAQAANYPFCTIEPNVGNVGVPDPRLDKLAEIAGSQKII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E + Sbjct: 66 PTQLGFVDIAGLVRGASKGEGLGNQFLGNIREVDAIVHVLRCFEND 111 >gi|327401128|ref|YP_004341967.1| small GTP-binding protein [Archaeoglobus veneficus SNP6] gi|327316636|gb|AEA47252.1| small GTP-binding protein [Archaeoglobus veneficus SNP6] Length = 353 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 49/88 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L +T AK ++ADY FTTL P G+++ + D+PG+I+ Sbjct: 61 ATVVLVGFPSVGKSTLLNVLTGAKSEVADYNFTTLKPVPGMLEYKGARIQIVDVPGLIEG 120 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSAL 247 A +G G G + ++L +V Sbjct: 121 ASKGRGRGKEVISAIRTADMILLVVDVF 148 >gi|15801432|ref|NP_287449.1| GTP-dependent nucleic acid-binding protein EngD [Escherichia coli O157:H7 EDL933] gi|25330220|pir||A85700 probable GTP-binding protein ychF [imported] - Escherichia coli (strain O157:H7, substrain EDL933) gi|12514916|gb|AAG56061.1|AE005338_1 putative GTP-binding protein [Escherichia coli O157:H7 str. EDL933] Length = 363 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 G +GLPN GK T ++T+A + A++P T+ PN G+V + E + Sbjct: 6 GXVGLPNVGKXTLFNALTKAGIEAANFPXCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + T + H+V E + Sbjct: 66 TTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFEND 110 >gi|28899590|ref|NP_799195.1| putative GTPase HflX [Vibrio parahaemolyticus RIMD 2210633] gi|260361397|ref|ZP_05774459.1| GTP-binding protein HflX [Vibrio parahaemolyticus K5030] gi|260876669|ref|ZP_05889024.1| GTP-binding protein HflX [Vibrio parahaemolyticus AN-5034] gi|260896638|ref|ZP_05905134.1| GTP-binding protein HflX [Vibrio parahaemolyticus Peru-466] gi|260900898|ref|ZP_05909293.1| GTP-binding protein HflX [Vibrio parahaemolyticus AQ4037] gi|28807826|dbj|BAC61079.1| GTP-binding protein HflX [Vibrio parahaemolyticus RIMD 2210633] gi|308086310|gb|EFO36005.1| GTP-binding protein HflX [Vibrio parahaemolyticus Peru-466] gi|308093962|gb|EFO43657.1| GTP-binding protein HflX [Vibrio parahaemolyticus AN-5034] gi|308106524|gb|EFO44064.1| GTP-binding protein HflX [Vibrio parahaemolyticus AQ4037] gi|308112890|gb|EFO50430.1| GTP-binding protein HflX [Vibrio parahaemolyticus K5030] Length = 429 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 19/185 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L ++ ILAD G I Sbjct: 197 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKMELADVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T+ +LLH+V A EN+QA ++ +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAVHE-VLEEIDAHEVPT--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFSIR 330 +V +++ID ++S T +++E VP S++ G GI + + L +++ S Sbjct: 313 --LVVMNKIDNLESQTPRIERDEEG-----VPRAVWVSAMEGLGIELLFDALTERLASQM 365 Query: 331 GENEF 335 E++ Sbjct: 366 VEHQL 370 >gi|62460422|ref|NP_001014865.1| developmentally-regulated GTP-binding protein 2 [Bos taurus] gi|75069848|sp|Q58D56|DRG2_BOVIN RecName: Full=Developmentally-regulated GTP-binding protein 2; Short=DRG-2 gi|61554622|gb|AAX46588.1| developmentally regulated GTP binding protein 2 [Bos taurus] gi|296476709|gb|DAA18824.1| developmentally-regulated GTP-binding protein 2 [Bos taurus] Length = 364 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 13/119 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A QG G G + + V++ ++ A + VQ S L K++E VG+ Sbjct: 123 AAQGKGRGRQVIAVARTADVVIMMLDATKGEVQ-------------RSLLEKELESVGI 168 >gi|332159538|ref|YP_004424817.1| hypothetical protein PNA2_1898 [Pyrococcus sp. NA2] gi|331035001|gb|AEC52813.1| hypothetical protein PNA2_1898 [Pyrococcus sp. NA2] Length = 356 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 30/177 (16%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII- 217 I + I G PN GKST L ++T AKP+IA YPFTT N+G ++GY + + D PG++ Sbjct: 167 IPTVVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLLD 226 Query: 218 -----KNAHQGAGIGDRFLKHTERTHVLLHIVS-------ALEENVQAAYQCILDELSAY 265 +N + I LKH +++++I LEE + + I DE Sbjct: 227 RPLSERNEIEKQAILA--LKHL--GNLIVYIFDPSEYCGFPLEEQMH-LFSEIFDEFR-- 279 Query: 266 NSELRKKIEIVGLSQIDTVD--SDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 E+ L+ I+ +D S+ +K + G P + S++ G GI ++ E Sbjct: 280 --------ELPFLAVINKIDVASEENVKKVEDFLRDKGLEPIKVSALKGIGIEKVRE 328 >gi|315427416|dbj|BAJ49023.1| GTPase [Candidatus Caldiarchaeum subterraneum] Length = 407 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG------------------ 199 + IG+IG N GK+TF + T +++ YPFTT PN G Sbjct: 1 MTVRIGLIGKTNTGKTTFFNAATLQYAEVSTYPFTTKQPNYGTTYAITPCVCREFNVTDN 60 Query: 200 ----IVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 + +GY+ + D+PG+IK A G G+G++FL + L+H+V A Sbjct: 61 PRNSLCIDGYRHIPVEIIDLPGLIKGAWAGKGLGNQFLSVASQADALIHVVDA 113 >gi|14591132|ref|NP_143208.1| hypothetical protein PH1320 [Pyrococcus horikoshii OT3] gi|3257743|dbj|BAA30426.1| 357aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 357 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 28/176 (15%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I + I G PN GKST L ++T AKP+IA YPFTT N+G ++GY + + D PG++ Sbjct: 167 IPTVVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVGQFEDGYFRYQIIDTPGLLD 226 Query: 219 NA-------HQGAGIGDRFLKHTERTHVLLHIVS-------ALEENVQAAYQCILDELSA 264 + A + R+L +++++I LEE + + +E+ Sbjct: 227 RPISERNEIEKQAILALRYL-----GNLIIYIFDPSEHCGFPLEEQIH-----LFEEV-- 274 Query: 265 YNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + E + +V +++ID D + + R + + + G P + S++ G GI + E Sbjct: 275 -HGEFKDLPFLVVINKIDVADEENIKRLE-KFVKEKGLNPIKISALKGTGIDLVKE 328 >gi|330997295|ref|ZP_08321148.1| GTP-binding protein YchF [Paraprevotella xylaniphila YIT 11841] gi|329571090|gb|EGG52797.1| GTP-binding protein YchF [Paraprevotella xylaniphila YIT 11841] Length = 367 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ +G + E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIDAQMGQITVPDERLNKLAELVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G++FL + T ++H++ + + Sbjct: 66 ATCDIVDIAGLVKGASKGEGLGNQFLGNIRETDAIIHVLRCFDND 110 >gi|322369365|ref|ZP_08043930.1| small GTP-binding protein [Haladaptatus paucihalophilus DX253] gi|320551097|gb|EFW92746.1| small GTP-binding protein [Haladaptatus paucihalophilus DX253] Length = 369 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 5/111 (4%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +G P+ GKST L S+T A+ ++ Y FTTL N G+++ L D+PG+I+ Sbjct: 61 ATVAFVGFPSVGKSTLLNSLTAAESEVGAYEFTTLNVNPGMLQYNGANIQLLDVPGLIEG 120 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR 270 A G G G L +++ ++S E + Y+ + +EL Y +++R Sbjct: 121 AAHGRGGGQEVLSVVRAADLVVFVLSVFEID---QYERLREEL--YENKIR 166 >gi|307106977|gb|EFN55221.1| hypothetical protein CHLNCDRAFT_56178 [Chlorella variabilis] Length = 390 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 20/131 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFI---------- 209 +GI+GLPN GKST ++TR ++PF T+ PN +V + +++ Sbjct: 24 MGIVGLPNVGKSTLFNTLTRLSIPAENFPFCTIDPNNARVVVPDPRFDWLCEKVQPKATV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 + DI G++K A +G G+G+ FL H + H+ A ++ + +D + Sbjct: 84 PAYLEVCDIAGLVKGAAEGQGLGNSFLSHISAVDGIFHVCRAFDDADVVHVEDRVDPVED 143 Query: 262 LSAYNSELRKK 272 L ++ELR K Sbjct: 144 LDIIHAELRAK 154 >gi|89266453|gb|ABD65518.1| developmentally-regulated GTP-binding protein 2 [Ictalurus punctatus] Length = 185 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 52/93 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GK TFL+ +T + + A Y FTTL G+++ L D+PGII+ Sbjct: 26 ARVALIGFPSVGKPTFLSLMTSTESEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 85 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + V++ ++ A + +VQ Sbjct: 86 AAQGKGRGRQVIAVARTADVVIMMLDATKGDVQ 118 >gi|308231740|ref|ZP_07663918.1| GTP binding protein [Mycobacterium tuberculosis SUMu001] gi|308370059|ref|ZP_07666859.1| GTP binding protein [Mycobacterium tuberculosis SUMu002] gi|308370621|ref|ZP_07666981.1| GTP binding protein [Mycobacterium tuberculosis SUMu003] gi|308371870|ref|ZP_07667256.1| GTP binding protein [Mycobacterium tuberculosis SUMu004] gi|308373039|ref|ZP_07430817.2| GTP binding protein [Mycobacterium tuberculosis SUMu005] gi|308374217|ref|ZP_07667734.1| GTP binding protein [Mycobacterium tuberculosis SUMu006] gi|308376626|ref|ZP_07668313.1| GTP binding protein [Mycobacterium tuberculosis SUMu008] gi|308377628|ref|ZP_07668555.1| GTP binding protein [Mycobacterium tuberculosis SUMu009] gi|308378839|ref|ZP_07668835.1| GTP binding protein [Mycobacterium tuberculosis SUMu010] gi|308379978|ref|ZP_07669086.1| GTP binding protein [Mycobacterium tuberculosis SUMu011] gi|308216202|gb|EFO75601.1| GTP binding protein [Mycobacterium tuberculosis SUMu001] gi|308325457|gb|EFP14308.1| GTP binding protein [Mycobacterium tuberculosis SUMu002] gi|308331388|gb|EFP20239.1| GTP binding protein [Mycobacterium tuberculosis SUMu003] gi|308335200|gb|EFP24051.1| GTP binding protein [Mycobacterium tuberculosis SUMu004] gi|308339006|gb|EFP27857.1| GTP binding protein [Mycobacterium tuberculosis SUMu005] gi|308342676|gb|EFP31527.1| GTP binding protein [Mycobacterium tuberculosis SUMu006] gi|308350482|gb|EFP39333.1| GTP binding protein [Mycobacterium tuberculosis SUMu008] gi|308355133|gb|EFP43984.1| GTP binding protein [Mycobacterium tuberculosis SUMu009] gi|308359086|gb|EFP47937.1| GTP binding protein [Mycobacterium tuberculosis SUMu010] gi|308363008|gb|EFP51859.1| GTP binding protein [Mycobacterium tuberculosis SUMu011] Length = 350 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 17/86 (19%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFILA- 211 +GLPN GKST ++TR A+YPF T+ PN G+V G + + A Sbjct: 1 MGLPNVGKSTLFNALTRNNVVAANYPFATIEPNEGVVSLPDPRLDKLAELFGSQRVVPAP 60 Query: 212 ----DIPGIIKNAHQGAGIGDRFLKH 233 DI G++K A +GAG+G++FL H Sbjct: 61 VTFVDIAGLVKGASEGAGLGNKFLAH 86 >gi|255077213|ref|XP_002502254.1| predicted protein [Micromonas sp. RCC299] gi|226517519|gb|ACO63512.1| predicted protein [Micromonas sp. RCC299] Length = 400 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 73/141 (51%), Gaps = 23/141 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +G++G+PN GKST +++ ++PF T+ PN + + + + + Sbjct: 26 VGLVGMPNVGKSTLYNALSNCSIPAENFPFCTIDPNSTRVNVPDDRFDWLVDHHKPKSVV 85 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G++K A +GAG+G+ FL H + ++H++ A ++ +V+ + D Sbjct: 86 QPYLEIVDIAGLVKGAAEGAGLGNAFLSHIKAVDGIIHVMRAFDDPDVIHVEDRVDPV-D 144 Query: 261 ELSAYNSELRKK-IEIVGLSQ 280 ++ SELR K +E + +++ Sbjct: 145 DIEIITSELRNKDLEFMNMTK 165 >gi|323450125|gb|EGB06008.1| hypothetical protein AURANDRAFT_72094 [Aureococcus anophagefferens] Length = 2850 Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 32/120 (26%) Query: 162 IGIIGLPNAGKSTFLASVTRAK----PKIADYPFTTLYPNL--GIVKEGYKE-------- 207 +G++G P+AGKSTF +VTR+ K A YPFTT+ PN+ G+ G ++ Sbjct: 1412 VGVVGKPSAGKSTFFNAVTRSTGALAAKCAAYPFTTIDPNVREGLFACGDRDPALGLGLE 1471 Query: 208 ------------------FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 +L D+ G++ A +G G G+RFL L+H+V A E Sbjct: 1472 LAPCPPHGRDAKGRRLLPALLKDVAGLVPGASRGEGKGNRFLNDLADADALVHVVDASAE 1531 >gi|320584073|gb|EFW98285.1| GTP-binding protein, putative [Pichia angusta DL-1] Length = 416 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-----------------IVKEG 204 IGI+G P++GKST L S+T A KI +PFTT+ PN + K Sbjct: 7 IGIVGKPSSGKSTTLNSLTDANAKIGAFPFTTIDPNRATGYLQVDCACARFGKQDLCKPN 66 Query: 205 Y------KEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 Y K + L D+ G+I A QG G+G++FL + L+H+V Sbjct: 67 YGWCSGGKRHVPVELLDVAGLIPGASQGLGLGNKFLDDLRQADALIHVV 115 >gi|78356741|ref|YP_388190.1| GTP-dependent nucleic acid-binding protein EngD [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219146|gb|ABB38495.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 366 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 23/111 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK------------------ 202 IGI+GLPN GKST ++T+A+ + A+YPF T+ PN V Sbjct: 5 IGIVGLPNVGKSTLFNALTKAQNAESANYPFCTIEPNKATVPVPDARIDKLTAMARPQKT 64 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 +FI DI G+++ A +G G+G++FL + + +L +V +EN+ Sbjct: 65 INATVDFI--DIAGLVRGASKGEGLGNQFLANIRESAAILQVVRCFDDENI 113 >gi|57641125|ref|YP_183603.1| GTPase [Thermococcus kodakarensis KOD1] gi|57159449|dbj|BAD85379.1| predicted GTPase, containing NOG1 domain [Thermococcus kodakarensis KOD1] Length = 358 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 27/186 (14%) Query: 145 ILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG 204 +L + ++ L+L + I G PN GKST L ++T AKP++A YPFTT N+G +E Sbjct: 156 VLKELPVVDLELPTVV---IAGHPNVGKSTLLRALTNAKPEVASYPFTTKGINVGQFEEH 212 Query: 205 YKEFILADIPGII------KNAHQGAGIGDRFLKHTERTHVLLHIVSALE------ENVQ 252 Y ++ + D PG++ +N + I LKH V+++I E E Sbjct: 213 YLKYQVIDTPGLLDRPLSERNEVEKQAILA--LKHL--GDVIVYIFDPSEYCGFPIEEQM 268 Query: 253 AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITG 312 ++ I E + IV L++ D D + + + E G P S++TG Sbjct: 269 HLFEEIYSEFGEFPF-------IVVLNKADIADEEKM-KTIEEFVKSKGLEPLRISALTG 320 Query: 313 HGIPQI 318 G+ ++ Sbjct: 321 EGLDEL 326 >gi|325119179|emb|CBZ54733.1| putative GTP binding protein [Neospora caninum Liverpool] Length = 396 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 17/120 (14%) Query: 147 GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKE 203 +EKI+ + + +G++GLPN GKST + + +YPF T+ P+ + + + Sbjct: 9 AEEKILLGRPRNTLKMGLVGLPNVGKSTTFNLLCKQAVPAENYPFCTIDPHEARMNVPDD 68 Query: 204 GYK--------------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 +K + DI G++ AH+G G+G+ FL H + + H+V A EE Sbjct: 69 RFKWLCNHFHPKSEVSATLAIFDIAGLVPGAHRGEGLGNAFLSHIQAVDGIYHVVRAFEE 128 >gi|157834845|pdb|2E87|A Chain A, Crystal Structure Of Hypothetical Gtp-Binding Protein Ph1320 From Pyrococcus Horikoshii Ot3, In Complex With Gdp Length = 357 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 28/176 (15%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I + I G PN GKST L ++T AKP+IA YPFTT N+G ++GY + + D PG++ Sbjct: 167 IPTVVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVGQFEDGYFRYQIIDTPGLLD 226 Query: 219 NA-------HQGAGIGDRFLKHTERTHVLLHIVS-------ALEENVQAAYQCILDELSA 264 + A + R+L +++++I LEE + + +E+ Sbjct: 227 RPISERNEIEKQAILALRYL-----GNLIIYIFDPSEHCGFPLEEQIH-----LFEEV-- 274 Query: 265 YNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + E + +V +++ID D + + R + + + G P + S++ G GI + E Sbjct: 275 -HGEFKDLPFLVVINKIDVADEENIKRLE-KFVKEKGLNPIKISALKGTGIDLVKE 328 >gi|322370426|ref|ZP_08044985.1| translation-associated GTPase [Haladaptatus paucihalophilus DX253] gi|320550134|gb|EFW91789.1| translation-associated GTPase [Haladaptatus paucihalophilus DX253] Length = 393 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 22/107 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------------------V 201 I + G PNAGKSTF + T A +A+YPFTT+ N G+ Sbjct: 4 IALAGKPNAGKSTFYKAATMADVDVANYPFTTIDANRGVSYVRTDCPCLERDERCGNDNC 63 Query: 202 KEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 +G Y L D+ G++ AH+G G+G++FL ++++V A Sbjct: 64 HDGKRYVPIELLDVAGLVPGAHEGRGLGNQFLDALTNADAIVNVVDA 110 >gi|146304723|ref|YP_001192039.1| small GTP-binding protein [Metallosphaera sedula DSM 5348] gi|145702973|gb|ABP96115.1| small GTP-binding protein [Metallosphaera sedula DSM 5348] Length = 331 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 10/162 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + + + G PN GKST ++ ++ A+P+IA+YPFTT ++G + G K ++ D PGI+ Sbjct: 157 LPTVMVAGPPNVGKSTLVSKISSARPEIANYPFTTKEIHVGHMDCGVKVQVI-DTPGILD 215 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK--KIEIV 276 + +R + R L IV + + + Y DE E++ K I+ Sbjct: 216 RPDAERNVIERKAVNALRNLNGL-IVFLFDVSTSSIYGA--DEQLNIMREVKSLGKPVIL 272 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 +++ID VD + + E+ ++ G E SS G GIP++ Sbjct: 273 AMNKIDAVDENM----RREILSRVGDKVLEISSEQGTGIPEL 310 >gi|253991552|ref|YP_003042908.1| GTPase HflX [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638430|emb|CAR67052.1| gtp-binding protein hflx [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783002|emb|CAQ86167.1| gtp-binding protein hflx [Photorhabdus asymbiotica] Length = 426 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 19/176 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKS+ +T A+ AD F TL P L ++ + +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSSLFNCMTSAEVYAADQLFATLDPTLRRIEVDDVGTAVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH+V A ++EN+ AA +L+E+ A+ + Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVVDAVDNRIDENI-AAVDSVLEEIDAHEIPV--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQILECLHDKI 326 ++ +++ID + T +NE +P S+ TG GIP +L+ L +++ Sbjct: 313 --LLVMNKIDMLGDFTPRIDRNE-----DNLPVRVWLSARTGEGIPLLLKALTERL 361 >gi|300706843|ref|XP_002995657.1| hypothetical protein NCER_101380 [Nosema ceranae BRL01] gi|239604843|gb|EEQ81986.1| hypothetical protein NCER_101380 [Nosema ceranae BRL01] Length = 362 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 2/124 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 IA IG IG P+ GKSTF++ +T ++A+Y FTTL G++ + + D+PGII+ Sbjct: 62 IARIGFIGFPSVGKSTFMSQLTGIHSEVAEYEFTTLTAIPGVITYNGAKIQILDLPGIIE 121 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A G G G + L +L+ + L+ + I EL ++ L K + + Sbjct: 122 GAKDGKGRGRQVLGVARTCSLLVICLDVLKPLTHK--RLIEKELESFGIRLNKNPPKIKI 179 Query: 279 SQID 282 S+ D Sbjct: 180 SRAD 183 >gi|325957783|ref|YP_004289249.1| GTPase [Methanobacterium sp. AL-21] gi|325329215|gb|ADZ08277.1| GTPase of unknown function domain protein [Methanobacterium sp. AL-21] Length = 395 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 I + G PN GKS+F S T ++ +A YPFTT+ N I Sbjct: 4 IAVTGKPNVGKSSFFNSATLSEVDVASYPFTTIDANKAIAHVVTDCPCKELELTCNPHNS 63 Query: 203 --EGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 +G K I L D+ G++ AH+G G+G++FL + +HI+ A Sbjct: 64 KCDGGKRLIPVELIDVAGLVPGAHEGRGLGNKFLDDLRQARAFIHIIDA 112 >gi|284161283|ref|YP_003399906.1| small GTP-binding protein [Archaeoglobus profundus DSM 5631] gi|284011280|gb|ADB57233.1| small GTP-binding protein [Archaeoglobus profundus DSM 5631] Length = 354 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 50/88 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L ++T AK ++ DY FTTL P G+++ + + D+PG+I+ Sbjct: 62 ASVFLVGFPSVGKSTLLNALTNAKSEVGDYDFTTLKPVPGMLEYKGAKIQIVDVPGLIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSAL 247 A +G G G L +++ +V Sbjct: 122 ASKGKGRGREVLSFIRNADLIVIVVDVF 149 >gi|255711116|ref|XP_002551841.1| KLTH0B01144p [Lachancea thermotolerans] gi|238933219|emb|CAR21403.1| KLTH0B01144p [Lachancea thermotolerans] Length = 411 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IGI+G P++GKST L S+T A ++ +PFTT+ PN Sbjct: 7 IGIVGKPSSGKSTTLNSLTDAAAQVGSFPFTTIEPNKATGYLQVDCVCGRFGKQALCKPN 66 Query: 198 LGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G G + +L D+ G++ AH G G+G++FL L+H+V Sbjct: 67 YGWCSNGKRHVPIMLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVV 115 >gi|322493055|emb|CBZ28340.1| putative GTP binding protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 392 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +GI+GLPN GKSTF +++ + PF T+ PN + I + + + + Sbjct: 25 VGIVGLPNVGKSTFFNVLSKKGVPAENRPFCTIDPNTADINIPDDRFDKLVRIHKPASIV 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+++ A G G+G+ FL H ++H+V EE Sbjct: 85 PAQVHICDIAGLVRGASNGEGLGNNFLSHISSCDGIIHMVRVFEE 129 >gi|19111985|ref|NP_595193.1| GTP binding protein (predicted) [Schizosaccharomyces pombe 972h-] gi|74627008|sp|O94362|YHOF_SCHPO RecName: Full=Uncharacterized GTP-binding protein C428.15 gi|3947879|emb|CAA22290.1| GTP binding protein (predicted) [Schizosaccharomyces pombe] Length = 409 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------------------- 200 IG +G P++GKST L ++T A K ++PFTT+ PN I Sbjct: 7 IGFVGKPSSGKSTMLNALTDATAKTGNFPFTTIEPNRAIGYAQIECACSRFGLQDKCKPI 66 Query: 201 ---VKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 K G + L D+ G+I AH G G+G++FL L+H+V Sbjct: 67 YGGCKNGVRSIPIQLLDVAGLIPGAHAGKGLGNKFLDDLRHADALVHVV 115 >gi|315425841|dbj|BAJ47494.1| translation-associated GTPase [Candidatus Caldiarchaeum subterraneum] Length = 402 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 37/144 (25%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------VKEGYKEFI 209 GI+G PN GKST ++++ +IA+YPFTT N+G+ +K+ + I Sbjct: 5 GIVGKPNVGKSTLFSALSMVNVEIANYPFTTKKTNVGVTYVRVECVCKKLGIKDNPRNSI 64 Query: 210 -----------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV----SALEENVQAA 254 + D PGII+ AH+G G+G +FL + +L+ + + L + A Sbjct: 65 CIDGVRLVPIQIIDCPGIIREAHKGKGLGLKFLDEIRQASLLIIVADVSGATLADGTPAE 124 Query: 255 ---------YQCILDELSAYNSEL 269 + +LDE A+ +E+ Sbjct: 125 PFTHDPVEDVEMVLDEFDAWLAEI 148 >gi|225713720|gb|ACO12706.1| Developmentally-regulated GTP-binding protein 2 [Lepeophtheirus salmonis] Length = 364 Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 52/93 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T+ + A Y FTTL G++ L D+PGII+ Sbjct: 63 ARVAMIGFPSVGKSTLLSTITKTESAQASYEFTTLTCIPGVIDYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L I+ A ++++ Sbjct: 123 AAQGKGRGRQVIAVARTADLVLMILDATKKDIH 155 >gi|330470020|ref|YP_004407763.1| GTP-binding protein YchF [Verrucosispora maris AB-18-032] gi|328812991|gb|AEB47163.1| GTP-binding protein YchF [Verrucosispora maris AB-18-032] Length = 361 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEFI 209 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V G ++ I Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGLPDERLHKLAEIFGSQKVI 64 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A DI G+++ A +G G G+ FL + + +V A + Sbjct: 65 PAPVSFVDIAGLVRGASKGQGRGNAFLANIRDASAICQVVRAFSD 109 >gi|219109989|ref|XP_002176747.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411282|gb|EEC51210.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 407 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 62/121 (51%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I +IG P+ GKS+ L S+T + + A Y FTTL G+++ + + D+PGII+ Sbjct: 64 ARIALIGFPSVGKSSLLNSLTTTESEAAGYEFTTLTCIPGVLRYKGSKMQVLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A GAG G + +L ++ A +E +Q + + EL L ++ V L+ Sbjct: 124 AAHGAGRGREVIAVARSADAILIVLDAGKEGLQKHREILERELETVGIRLNQRAPDVTLT 183 Query: 280 Q 280 + Sbjct: 184 K 184 >gi|157167493|ref|XP_001654823.1| GTP-binding protein [Aedes aegypti] gi|108882448|gb|EAT46673.1| GTP-binding protein [Aedes aegypti] Length = 398 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 22/134 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+G+PN GKSTF +T++ ++PF T+ PN V F Sbjct: 24 IGIVGVPNVGKSTFFNVLTKSAAPAENFPFCTIDPNENRVPVPDARFDYLCEYHKPASKV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G++K A +G G+G+ FL H + H+ A ++ +V+ + D Sbjct: 84 PAYLNVVDIAGLVKGAAEGQGLGNAFLSHINACDAIFHLCRAFDDPDVTHVEGEVDPVRD 143 Query: 261 ELSAYNSELRKKIE 274 L+ ELR K E Sbjct: 144 -LAIIAEELRLKDE 156 >gi|198438393|ref|XP_002125117.1| PREDICTED: similar to Obg-like ATPase 1 (GTP-binding protein 9) isoform 2 [Ciona intestinalis] Length = 400 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLG--IVKEGYKEFI--------- 209 IGI+GLPN GKSTF +T+++ A+ +PF T+ PN V + EF+ Sbjct: 25 IGIVGLPNVGKSTFFNVLTKSELASAENFPFCTIDPNESRVPVPDERWEFLCKYHKPASK 84 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G++K A++G G+G+ FL H + H+ A ++ Sbjct: 85 VPAFLSVVDIAGLVKGANEGQGLGNAFLSHISGCDAIFHMTRAFDD 130 >gi|260825869|ref|XP_002607888.1| hypothetical protein BRAFLDRAFT_74841 [Branchiostoma floridae] gi|229293238|gb|EEN63898.1| hypothetical protein BRAFLDRAFT_74841 [Branchiostoma floridae] Length = 886 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 25/110 (22%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 IG++G P+AGKSTF A++ + + + A +PFTT+ PN GI Sbjct: 66 IGLVGKPSAGKSTFFNAAMAQNQARTAAHPFTTIEPNFGIAYFSVPCPCAKMDHRCEAAY 125 Query: 203 -EGYK-----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 YK +L D+ G++ A G G G+RFL VL+HI+ A Sbjct: 126 GHNYKGERLVPVLLKDVAGLVPGAADGKGRGNRFLNDLLDADVLIHIIDA 175 >gi|154340096|ref|XP_001566005.1| GTP binding protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134063323|emb|CAM45529.1| putative GTP binding protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 392 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +GI+GLPN GKSTF +++ + PF T+ PN + I + + + + Sbjct: 25 VGIVGLPNVGKSTFFNVLSKKGVPAENRPFCTIDPNTADINIPDDRFDKLVRIHKPASIV 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+++ A G G+G+ FL H ++H+V EE Sbjct: 85 PAQVHICDIAGLVRGASNGEGLGNNFLSHISSCDGIIHMVRVFEE 129 >gi|73544595|ref|XP_848192.1| GTP binding protein [Leishmania major strain Friedlin] gi|321438545|emb|CBZ12304.1| putative GTP binding protein [Leishmania major strain Friedlin] Length = 392 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +GI+GLPN GKSTF +++ + PF T+ PN + I + + + + Sbjct: 25 VGIVGLPNVGKSTFFNVLSKKGVPAENRPFCTIDPNTADINIPDDRFDKLVRIHKPASIV 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+++ A G G+G+ FL H ++H+V EE Sbjct: 85 PAQVHICDIAGLVRGASNGEGLGNNFLSHISSCDGIIHMVRVFEE 129 >gi|114799588|ref|YP_760625.1| GTP-dependent nucleic acid-binding protein EngD [Hyphomonas neptunium ATCC 15444] gi|114739762|gb|ABI77887.1| GTP-binding protein YchF [Hyphomonas neptunium ATCC 15444] Length = 365 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A A + A+YPF T+ PN+G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGEVAVPEARLTKLAAVAGSKEII 65 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI G+++ A QG G+G++FL + T +++++ E + Sbjct: 66 PARMNFVDIAGLVEGASQGEGLGNKFLANIRETDAVIYVLRCFEND 111 >gi|114328982|ref|YP_746139.1| GTP-dependent nucleic acid-binding protein EngD [Granulibacter bethesdensis CGDNIH1] gi|114317156|gb|ABI63216.1| GTP-binding protein [Granulibacter bethesdensis CGDNIH1] Length = 364 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 22/110 (20%) Query: 161 DIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVK----------------- 202 + GI+GLPN GKST ++T + A+YPF T+ PN+G V Sbjct: 4 NCGIVGLPNVGKSTLFNALTATVAAQAANYPFCTIEPNVGRVAVPDPRMEKLATAAKSQK 63 Query: 203 --EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 64 IVPTSLEFV--DIAGLVRGASRGEGLGNQFLGNIREVDAIIHVLRCFEDD 111 >gi|110762023|ref|XP_396711.3| PREDICTED: GTP-binding protein CG1354-like isoform 1 [Apis mellifera] Length = 397 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 +GI+G+PN GKSTF +T+++ ++PF T+ PN V F Sbjct: 24 VGIVGIPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDARFDYLCDYFKPASKV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G+ FL H + H+ A +++ Sbjct: 84 PAFLNVVDIAGLVKGAAEGQGLGNSFLSHINACDGIFHLCRAFDDD 129 >gi|145537167|ref|XP_001454300.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124422055|emb|CAK86903.1| unnamed protein product [Paramecium tetraurelia] Length = 389 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 +GI+G+ N GKST ++ + +YPF T+ PN V + F+ Sbjct: 24 MGIVGMANVGKSTTFNTLCKLNVPAENYPFCTIDPNNAKVPVPDERFLKLCQIHKPKSEI 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 + DI G++ AH+G G+G+ FL H + + H+V A E ENV Sbjct: 84 QAVLSIVDIAGLVPGAHKGEGLGNAFLSHIKECDGIYHVVRAFEDENV 131 >gi|302844233|ref|XP_002953657.1| hypothetical protein VOLCADRAFT_82356 [Volvox carteri f. nagariensis] gi|300261066|gb|EFJ45281.1| hypothetical protein VOLCADRAFT_82356 [Volvox carteri f. nagariensis] Length = 403 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +GI+GLPN GKS+ +T +YPF T+ PN + E Y Sbjct: 27 MGIVGLPNVGKSSLFNLLTEQNIAAENYPFCTIDPNESRCAVPDERYDWLCNLWKPPSMY 86 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+++ A +GAG+G+ FL H + H+V A + + Sbjct: 87 PAYLQITDIAGLVRGAAEGAGLGNAFLSHISAVDGIFHVVRAFDND 132 >gi|258544623|ref|ZP_05704857.1| GTP-dependent nucleic acid-binding protein EngD [Cardiobacterium hominis ATCC 15826] gi|258520131|gb|EEV88990.1| GTP-dependent nucleic acid-binding protein EngD [Cardiobacterium hominis ATCC 15826] Length = 364 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 21/109 (19%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 + GI+GLPN GKST ++T A +YPF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTNAGIDAQNYPFCTIEPNTGIVYMPDPRLDALAAIVKPERV 63 Query: 203 -EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 EF+ DI G++ A +G G+G++FL + T + +V + + Sbjct: 64 LPTTMEFV--DIAGLVAGASKGEGLGNQFLANIRETDAIAQVVRCFDND 110 >gi|313216653|emb|CBY37922.1| unnamed protein product [Oikopleura dioica] gi|313234060|emb|CBY19637.1| unnamed protein product [Oikopleura dioica] Length = 400 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 22/131 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFIL------------ 210 GI+GLPN GKSTF +T++ ++PF T+ PN V + F + Sbjct: 34 GIVGLPNVGKSTFFNVLTKSSIPAENFPFCTIDPNEARVTVPDQRFDMLCEDHKPKSKIP 93 Query: 211 -----ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDE 261 DI G++K A++G G+G+ FL H + H++ ++ +V+ + D Sbjct: 94 AYLNVVDIAGLVKGANEGQGLGNAFLSHISGCDAIFHMLRLFKDEDITHVEGEVDPVRD- 152 Query: 262 LSAYNSELRKK 272 + N ELR K Sbjct: 153 IQIINDELRLK 163 >gi|296110116|ref|YP_003617065.1| GTPase of unknown function domain protein [Methanocaldococcus infernus ME] gi|295434930|gb|ADG14101.1| GTPase of unknown function domain protein [Methanocaldococcus infernus ME] Length = 393 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------VKE---------- 203 IG++G PN GKSTF ++T + I +YPFTT+ PN GI KE Sbjct: 2 IGLVGKPNVGKSTFFNALTEKEVDIGNYPFTTIEPNKGIGFITSECPCKELNLKCNPRNS 61 Query: 204 ------GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 Y + D+ G++ A++G G+G++FL + + +V A Sbjct: 62 KCIDGIRYIPVEVVDVAGLVPGAYEGRGMGNKFLDDLRQADAFILVVDA 110 >gi|255284195|ref|ZP_05348750.1| Spo0B-associated GTP-binding protein [Bryantella formatexigens DSM 14469] gi|255265220|gb|EET58425.1| Spo0B-associated GTP-binding protein [Bryantella formatexigens DSM 14469] Length = 105 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 42/82 (51%), Positives = 55/82 (67%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D AK+ I SG GG G +SFRRE ++ GGPDGG GG+GGDV + + TL D+RY+ Sbjct: 24 FADRAKIIICSGKGGDGHVSFRRELYVAAGGPDGGDGGKGGDVIFEVDKGMTTLGDYRYR 83 Query: 63 QHFKAQHGEKGMKRNRSGAKGE 84 + F A+ GE G KR + GA G+ Sbjct: 84 RKFSAEPGENGNKRRQHGANGK 105 >gi|56757436|gb|AAW26886.1| SJCHGC02630 protein [Schistosoma japonicum] Length = 188 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 6/144 (4%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L S+T + A Y FTTL G+++ L D+PGII+ Sbjct: 6 ARVALIGFPSVGKSTLLNSLTSTHSECASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 65 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A QG G G + + ++L ++ A + +V + + +EL + L K + Sbjct: 66 ASQGKGRGRQVIAVARTADLVLMMLDATKPDVHR--KLLENELESVGIRLNKNKPNIYFK 123 Query: 280 QIDT----VDSDTLARKKNELATQ 299 Q T + S K NE TQ Sbjct: 124 QKKTGGLKITSMVSLTKMNEKMTQ 147 >gi|84393185|ref|ZP_00991949.1| GTP-binding protein HflX [Vibrio splendidus 12B01] gi|84376237|gb|EAP93121.1| GTP-binding protein HflX [Vibrio splendidus 12B01] Length = 435 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 15/176 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L ++ ILAD G I Sbjct: 197 IPTISLVGYTNAGKSTLFNQITSAGVYAADQLFATLDPTLRKIELADVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T+ +LLH+V A EN+QA ++ +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETQEADILLHVVDASDDRFRENIQAVHE-VLEEIDAH------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 E+ L ++ +D + + E + S++ G GI + E L +++ S Sbjct: 309 -EVPTLVVMNKIDCMEDQKPRIERDEEGAPRAVWVSAMEGEGIELLFEALTERLAS 363 >gi|159487401|ref|XP_001701711.1| predicted protein [Chlamydomonas reinhardtii] gi|158280930|gb|EDP06686.1| predicted protein [Chlamydomonas reinhardtii] Length = 403 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 17/104 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +GI+GLPN GKS+ +T +YPF T+ PN + E Y+ Sbjct: 27 MGIVGLPNVGKSSLFNLLTEQSIAAENYPFCTIDPNESRCAVPDERYEWLCDLWKPPSMY 86 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G+++ A +GAG+G+ FL H + H+V A + Sbjct: 87 PAYLQVTDIAGLVRGAAEGAGLGNAFLSHISAVDGIFHVVRAFD 130 >gi|167043989|gb|ABZ08675.1| putative GTP1/OBG family protein [uncultured marine crenarchaeote HF4000_APKG3K8] Length = 369 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 3/113 (2%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + IIGLP+ GKST L ++T +K + + FTT+ G++ + + D+PGIIK Sbjct: 64 ATVVIIGLPSVGKSTLLNALTGSKSLVGAFQFTTVTVVPGVLDYRGAKIQMLDLPGIIKG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G+G R L ++L ++ + + +++ELS L KK Sbjct: 124 ASSGKGLGKRILSVARSADIVLLVLDVFQPYHE---DVLINELSNIGIRLNKK 173 >gi|110332001|gb|ABG67106.1| GTP-binding protein PTD004 [Bos taurus] Length = 133 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 17/100 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF------------- 208 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + DI G++K AH G G+G+ FL H + H+ Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLT 124 >gi|302869809|ref|YP_003838446.1| GTP-binding protein YchF [Micromonospora aurantiaca ATCC 27029] gi|315503725|ref|YP_004082612.1| gtp-binding protein ychf [Micromonospora sp. L5] gi|302572668|gb|ADL48870.1| GTP-binding protein YchF [Micromonospora aurantiaca ATCC 27029] gi|315410344|gb|ADU08461.1| GTP-binding protein YchF [Micromonospora sp. L5] Length = 361 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 21/107 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA---------- 211 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V G + LA Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVV--GLPDERLAKLAEIFSSQK 62 Query: 212 ---------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+++ A +G G G+ FL + + +V A + Sbjct: 63 VLPAPVSFVDIAGLVRGASKGQGRGNAFLANIRDASAICQVVRAFSD 109 >gi|254581294|ref|XP_002496632.1| ZYRO0D04576p [Zygosaccharomyces rouxii] gi|238939524|emb|CAR27699.1| ZYRO0D04576p [Zygosaccharomyces rouxii] Length = 369 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 14/135 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G +G P+ GKST L+ +T + + A+Y FTTL GI++ + + D+PGII Sbjct: 65 VASVGFVGFPSVGKSTLLSKLTGTESESAEYEFTTLVTVPGIIRYKGAKIQMLDLPGIID 124 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A G G G + + RT +L IV L+ N A++ I++ K++E VG+ Sbjct: 125 GAKDGRGRGKQVIA-VARTSNMLFIV--LDVNKPLAHKQIIE----------KELEGVGI 171 Query: 279 SQIDTVDSDTLARKK 293 +++ D + +KK Sbjct: 172 -RVNKSPPDIIVKKK 185 >gi|16124734|ref|NP_419298.1| translation-associated GTPase [Caulobacter crescentus CB15] gi|221233449|ref|YP_002515885.1| GTP-dependent nucleic acid-binding protein EngD [Caulobacter crescentus NA1000] gi|13421654|gb|AAK22466.1| GTP-binding protein, YchF family [Caulobacter crescentus CB15] gi|220962621|gb|ACL93977.1| GTP-binding protein, probable translation factor [Caulobacter crescentus NA1000] Length = 366 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 18/107 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 + I+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE Sbjct: 5 VAIVGLPNVGKSTLFNALTQTASAQAANYPFCTIEPNTGDVAVPEPRLNALAKIAGSKEI 64 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 I A D+ G+++ A +G G+G++FL + + + E++ Sbjct: 65 IPARINFVDVAGLVRGASKGEGLGNQFLANIRDCDAVAFVARCFEDS 111 >gi|254583394|ref|XP_002497265.1| ZYRO0F01584p [Zygosaccharomyces rouxii] gi|238940158|emb|CAR28332.1| ZYRO0F01584p [Zygosaccharomyces rouxii] Length = 413 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IGI+G P++GKST L S+T A I +PFTT+ PN Sbjct: 7 IGIVGKPSSGKSTTLNSLTDASASIGSFPFTTIDPNRATGYVQIDCACSRFGKESLCKPN 66 Query: 198 LGIVKEGYKE--FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G G + +L D+ G++ AH G G+G++FL L+H+V Sbjct: 67 YGWCTNGKRHVPIMLLDVAGLVPGAHIGRGLGNKFLDDLRHADALIHVV 115 >gi|324536307|gb|ADY49457.1| GTP-binding protein [Ascaris suum] Length = 155 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 51/89 (57%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L+ +T + + A Y FTTL G+++ L D+PGII+ Sbjct: 64 ARVAMVGFPSVGKSTLLSELTTTRSETAAYEFTTLTCIPGVIEHEGANIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A QG G G + + + ++L ++ A++ Sbjct: 124 ASQGKGRGRQVIAVAKTADLILMMLDAVK 152 >gi|289580861|ref|YP_003479327.1| small GTP-binding protein [Natrialba magadii ATCC 43099] gi|289530414|gb|ADD04765.1| small GTP-binding protein [Natrialba magadii ATCC 43099] Length = 370 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 49/89 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKS+ L S+T A+ + Y FTTL N G++ + D+PG+I+ Sbjct: 62 ATIALVGFPSVGKSSLLNSMTNAESETGSYEFTTLDVNPGMLSHRGANIQMLDVPGLIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + L ++++++S E Sbjct: 122 AATGRGDGKQVLAVVRNADLIVYVLSVFE 150 >gi|328866839|gb|EGG15222.1| hypothetical protein DFA_10052 [Dictyostelium fasciculatum] Length = 1351 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL---GIVKEGYKEFI--------- 209 +G++GLPN GKS+ +T ++PF T+ PN+ + E Y + Sbjct: 23 MGLVGLPNVGKSSMFNILTNMSIPAENFPFCTIDPNVSRCAVPDERYDWLVDLHKPKSNI 82 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A GAG+G+ FL H ++ + H++ A +++ Sbjct: 83 PAYLTITDIAGLVKGASTGAGLGNAFLSHIQQVDGIFHMIRAFDDS 128 >gi|328864880|gb|EGG13266.1| GTP-binding-like protein [Dictyostelium fasciculatum] Length = 367 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G+IG P+ GKST L +T + ++A Y FTTL G+++ + L D+PGII+ Sbjct: 64 ARVGLIGFPSVGKSTLLTKLTGTRSEVASYEFTTLTCIPGVIQYNGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + +++L ++ A++ V + I EL + L ++ Sbjct: 124 AKDGKGRGRQVIAVGRTCNLILIVLDAMKPLVHK--KIIERELEGFGIRLNRQ 174 >gi|260858326|ref|YP_003232217.1| putative GTPase HflX [Escherichia coli O26:H11 str. 11368] gi|257756975|dbj|BAI28477.1| predicted GTPase HflX [Escherichia coli O26:H11 str. 11368] gi|323156010|gb|EFZ42172.1| GTP-binding proten HflX [Escherichia coli EPECa14] Length = 426 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 15/170 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A ++EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV-NTVLEEIDAH------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 EI L ++ +D + + + + S+ TG GIPQ+ + L Sbjct: 309 -EIPTLLVMNKIDMLEDFEPRIDRDEENKPIRVWLSAQTGAGIPQLFQAL 357 >gi|256810489|ref|YP_003127858.1| GTPase of unknown function domain protein [Methanocaldococcus fervens AG86] gi|256793689|gb|ACV24358.1| GTPase of unknown function domain protein [Methanocaldococcus fervens AG86] Length = 391 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------VKE---------- 203 IG++G PN GKST ++T +I +YPFTT+ PN GI KE Sbjct: 2 IGLVGKPNVGKSTMFNALTEKPAEIGNYPFTTIQPNKGIAYITSSCPCKELGVKCNPRNS 61 Query: 204 ------GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 Y + D+ G++ AH+G G+G++FL + + +V A Sbjct: 62 KCIDGVRYIPVEVIDVAGLVPGAHEGRGMGNKFLDDLRQADAFILVVDA 110 >gi|66827157|ref|XP_646933.1| hypothetical protein DDB_G0268758 [Dictyostelium discoideum AX4] gi|60475032|gb|EAL72968.1| hypothetical protein DDB_G0268758 [Dictyostelium discoideum AX4] Length = 393 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL---GIVKEGYKEFI--------- 209 +G++G+PN GKS+ + + ++PF T+ PNL + E Y Sbjct: 24 MGVVGMPNVGKSSLFNLLCKMSIPAENFPFCTIDPNLSRCAVPDERYTWLCEHWKPKSEV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A GAG+G+ FL H ++ + H++ A E + Sbjct: 84 PSYLQITDIAGLVKGASTGAGLGNAFLSHIQQVDGIYHMIRAFEND 129 >gi|302348881|ref|YP_003816519.1| Gtp-binding protein [Acidilobus saccharovorans 345-15] gi|302329293|gb|ADL19488.1| Gtp-binding protein [Acidilobus saccharovorans 345-15] Length = 407 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 25/110 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI---------VKEG-------- 204 IGI+G N GKS+F ++ T + I + PF T+ PN+GI V+ G Sbjct: 8 IGIVGKTNVGKSSFFSAATGIEVPIENRPFVTIEPNVGIGYARKKCVHVELGLPKCDASN 67 Query: 205 --------YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 Y L D+ G+I AH+G G+G++FL R+ V L +V A Sbjct: 68 SACIMGYRYIPVKLMDVAGLIPGAHEGKGLGNKFLDDLRRSDVFLLVVDA 117 >gi|30024666|gb|AAP13583.1|AF407338_1 developmentally regulated GTP-binding protein [Lentinula edodes] Length = 366 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 52/93 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+ +T + + A Y FTTL G+++ L D+PGI++ Sbjct: 63 ARVALIGFPSVGKSTLLSKLTHTQSEAAAYEFTTLTAIPGVIEYKGARIQLLDLPGIVEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + + V+L ++ A + + Q Sbjct: 123 ASQGRGRGRQVVSTAKTADVILIMLDATKSDEQ 155 >gi|261403518|ref|YP_003247742.1| GTPase of unknown function domain protein [Methanocaldococcus vulcanius M7] gi|261370511|gb|ACX73260.1| GTPase of unknown function domain protein [Methanocaldococcus vulcanius M7] Length = 391 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 IG++G PN GKST ++T +I +YPFTT+ PN GI Sbjct: 2 IGLVGKPNVGKSTMFNALTEKPAEIGNYPFTTIQPNKGIAYITSPCPCRELGVNCNPRNS 61 Query: 203 ---EG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 EG Y + D+ G++ AH+G G+G++FL + + +V A Sbjct: 62 KCIEGIRYIPVEVIDVAGLVPGAHEGKGMGNKFLDDLRQADAFILVVDA 110 >gi|238060969|ref|ZP_04605678.1| translation associated GTPase [Micromonospora sp. ATCC 39149] gi|237882780|gb|EEP71608.1| translation associated GTPase [Micromonospora sp. ATCC 39149] Length = 361 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 21/107 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA---------- 211 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V G + LA Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVV--GLPDERLAKLAEIFSSQK 62 Query: 212 ---------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+++ A +G G G+ FL + + +V A + Sbjct: 63 VLPAPVSFVDIAGLVRGASKGQGRGNAFLANIRDASAICQVVRAFSD 109 >gi|256085915|ref|XP_002579155.1| developmentally regulated GTP-binding protein 2 (drg 2) [Schistosoma mansoni] gi|238664567|emb|CAZ35394.1| developmentally regulated GTP-binding protein 2 (drg 2), putative [Schistosoma mansoni] Length = 363 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 2/112 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L S+T + A Y FTTL G+++ L D+PGII+ Sbjct: 62 ARVSLIGFPSVGKSTLLNSLTSTHSECASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 A QG G G + + ++L ++ A + +V + + +EL A L K Sbjct: 122 ASQGKGRGRQVIAVARTADLVLMMLDATKPDVHR--KLLENELEAVGIRLNK 171 >gi|123438916|ref|XP_001310235.1| GTP-binding protein 1 [Trichomonas vaginalis G3] gi|121891996|gb|EAX97305.1| GTP-binding protein 1, putative [Trichomonas vaginalis G3] Length = 366 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 2/106 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + + G P+ GKS+ L +T + +I DY FTTL GI++ + L D+PGI++ Sbjct: 63 ARVCLFGFPSVGKSSLLCKLTDKQSEIGDYDFTTLTAVPGILQVNGVDIQLLDLPGILQG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 A G G G + L +++++++A + +V+ + + +EL ++ Sbjct: 123 ASTGYGKGKQVLAVVRSCDLIVYVINAAKADVE--IETLTNELHSF 166 >gi|159901204|ref|YP_001547451.1| GTP-dependent nucleic acid-binding protein EngD [Herpetosiphon aurantiacus ATCC 23779] gi|159894243|gb|ABX07323.1| GTP-binding protein YchF [Herpetosiphon aurantiacus ATCC 23779] Length = 360 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKEFILA 211 IGIIGLPN+GK+T ++TR + Y + PN+ +VK + YK L Sbjct: 3 IGIIGLPNSGKTTVFNALTRNTAETNAYSSGQIEPNIAMVKVPDERLDALAKMYKPKKLT 62 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 D+ G+ NAH+ G+ +FL + + LLH+V A E+ Sbjct: 63 PADVQYIDVAGMSGNAHESGGLNPQFLNYISQVDALLHVVRAFED 107 >gi|320169832|gb|EFW46731.1| GTP-binding protein [Capsaspora owczarzaki ATCC 30864] Length = 393 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 22/131 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-------------- 208 GI+GLPN GKSTF +T++ ++PF T+ PN + F Sbjct: 24 GIVGLPNVGKSTFFNVLTKSSAAAENFPFCTIEPNEARCPVPDERFDWLCAHHKPASKVP 83 Query: 209 ---ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDE 261 + DI G++K A +G G+G+ FL H + + H++ E+ +V+ I D Sbjct: 84 AYLQITDIAGLVKGAAEGQGLGNAFLSHIKAVDGIFHMLRTFEDEDVTHVEGDVNPIRD- 142 Query: 262 LSAYNSELRKK 272 L + ELR K Sbjct: 143 LEIIHEELRLK 153 >gi|16081987|ref|NP_394400.1| related protein GTP1/OBGfamily GTP-binding protein [Thermoplasma acidophilum DSM 1728] gi|10640256|emb|CAC12070.1| GTP-binding protein related protein, GTP1/OBG-family [Thermoplasma acidophilum] Length = 326 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/54 (50%), Positives = 36/54 (66%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G+PN GKS+ LA++T KP+IA YPFTT +GI + GY+ D PGI+ Sbjct: 172 IAGMPNVGKSSLLAALTTKKPEIAPYPFTTKSVIIGIAEHGYERIQFIDTPGIL 225 >gi|300710567|ref|YP_003736381.1| translation-associated GTPase [Halalkalicoccus jeotgali B3] gi|299124250|gb|ADJ14589.1| translation-associated GTPase [Halalkalicoccus jeotgali B3] Length = 396 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 24/107 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG----IVKEGYKEF--------- 208 IG++G P+ GKSTF + T YPFTT+ P++G V+ EF Sbjct: 5 IGLVGKPSVGKSTFFNAATMNDVPEGAYPFTTIDPSVGEAYVRVECAAPEFDRSCTPETG 64 Query: 209 -----------ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 L D+ G+I AH+G G+G++FL T VL+H+V Sbjct: 65 FCRDETRFVPTKLVDVAGLIPGAHEGNGLGNQFLTDLNETDVLVHVV 111 >gi|167644676|ref|YP_001682339.1| GTP-dependent nucleic acid-binding protein EngD [Caulobacter sp. K31] gi|167347106|gb|ABZ69841.1| GTP-binding protein YchF [Caulobacter sp. K31] Length = 366 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 + I+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE Sbjct: 5 VAIVGLPNVGKSTLFNALTQTASAQAANYPFCTIEPNTGEVAVPEPRLDALAKVAGSKEI 64 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I A DI G+++ A +G G+G++FL + + + E+ Sbjct: 65 IPARITFVDIAGLVRGASKGEGLGNQFLANIRDCDAVAFVARCFED 110 >gi|156093524|ref|XP_001612801.1| GTP-binding protein [Plasmodium vivax SaI-1] gi|148801675|gb|EDL43074.1| GTP-binding protein, putative [Plasmodium vivax] Length = 392 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 17/118 (14%) Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEG 204 ++K++ + K +G++GLPN GKST +T+ +YPF T+ P+ + + E Sbjct: 9 EQKVLLGRPKNTLKMGLVGLPNVGKSTTFNVLTKLNIPAENYPFCTIEPHEAKVTVEDER 68 Query: 205 YKEFI--------------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + + + DI G++KNAH G G+G+ FL + + H+V A E Sbjct: 69 FDWLVSHFKPKSNVHAYLSIFDIAGLVKNAHLGEGLGNNFLSNIAAVDGIYHVVRAFE 126 >gi|145349186|ref|XP_001419021.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579251|gb|ABO97314.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 410 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 4/115 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L+ +T + + A Y FTTL G++ + L D+PGII+ A Sbjct: 66 VALIGFPSVGKSTLLSQLTGTESEAAAYEFTTLTCIPGVIHYNDAKIQLLDLPGIIEGAS 125 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEE---NVQAAYQCILD-ELSAYNSELRKK 272 +G G G + + + + ++L ++ A + N + A++ IL EL A L KK Sbjct: 126 EGKGRGRQVIAVAKSSDLILMVLDACKSEAANSRYAHKDILTRELEAVGLRLNKK 180 >gi|154252702|ref|YP_001413526.1| GTP-binding protein YchF [Parvibaculum lavamentivorans DS-1] gi|154156652|gb|ABS63869.1| GTP-binding protein YchF [Parvibaculum lavamentivorans DS-1] Length = 369 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 22/149 (14%) Query: 163 GIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST ++T+ A + A+YPF T+ PN+G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTQTASAQAANYPFCTIEPNVGEVAVPDPRLEKLASVAKSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 DI G++K A +G G+G++FL + +++ ++ + +D LS Sbjct: 66 PTRLTFVDIAGLVKGASKGEGLGNQFLATIREVDAVAYVLRCFVDDDITHVENRIDPLS- 124 Query: 265 YNSELRKKIEIVGLSQIDTVDSDTLARKK 293 ++E+ + E++ L+ +D+++ +A +K Sbjct: 125 -DAEI-VETELM-LADLDSLEKRVVANEK 150 >gi|160887805|ref|ZP_02068808.1| hypothetical protein BACUNI_00208 [Bacteroides uniformis ATCC 8492] gi|270295038|ref|ZP_06201239.1| GTP-binding protein YchF [Bacteroides sp. D20] gi|156862747|gb|EDO56178.1| hypothetical protein BACUNI_00208 [Bacteroides uniformis ATCC 8492] gi|270274285|gb|EFA20146.1| GTP-binding protein YchF [Bacteroides sp. D20] Length = 367 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ +G V E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIDAQMGQVSVPDERLTKLAELVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++K A +G G+G++FL + ++H++ + Sbjct: 66 AVCDIVDIAGLVKGASKGEGLGNQFLGNIRECDAIIHVLRCFD 108 >gi|268570350|ref|XP_002648486.1| Hypothetical protein CBG24776 [Caenorhabditis briggsae] gi|187039836|emb|CAP21310.1| hypothetical protein CBG_24776 [Caenorhabditis briggsae AF16] Length = 366 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L+S+T + A Y FTTL G++ L D+PGII+ Sbjct: 63 ARVAMVGFPSVGKSTLLSSMTSTHSEAAGYEFTTLTCIPGVISYNGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A QG G G + + + + ++L ++ A + + Q + EL A L KK Sbjct: 123 ASQGKGRGRQVISVAKTSDLILMMLDAGKSDQQK--MLLERELEAVGIRLNKK 173 >gi|194389326|dbj|BAG61624.1| unnamed protein product [Homo sapiens] Length = 248 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 5/118 (4%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 +ADIPGII+ AHQ G+G FL+H ER LL +V + + EL Y L Sbjct: 118 VADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGL 177 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 + + ++ID ++ ++L GQ S++TG + Q+L LH K+ Sbjct: 178 SARPHAIVANKIDLPEAQA---NLSQLRDHLGQEVIVLSALTGENLEQLL--LHLKVL 230 >gi|168698580|ref|ZP_02730857.1| translation-associated GTPase [Gemmata obscuriglobus UQM 2246] Length = 367 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 18/107 (16%) Query: 161 DIGIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKST F A ++ + + A+YPF T+ PN+G V K Sbjct: 4 ECGIVGLPNVGKSTLFNALLSTMQAEAANYPFCTIEPNVGRVAVPDERLAKLAKIANSAK 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+++ A +G G G+ FL H + +++++ E+ Sbjct: 64 LIPTQLEFVDIAGLVRGASKGEGKGNEFLSHIRTVNAIIYVLRCFED 110 >gi|145498321|ref|XP_001435148.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124402278|emb|CAK67751.1| unnamed protein product [Paramecium tetraurelia] Length = 356 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 2/111 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 IG+IG P+ GKST L +T KIA Y FTTL G+++ + L D+PGII+ A Sbjct: 66 IGMIGFPSVGKSTLLTKLTGVFSKIAAYEFTTLTCIPGVLQHKGAKIQLLDLPGIIEGAK 125 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G G G + + +++L ++ A V + I EL + L K+ Sbjct: 126 DGKGRGKQVIAVARTCNLILIVLDATRPMVHK--KIIERELEGFGIRLNKQ 174 >gi|303281704|ref|XP_003060144.1| predicted protein [Micromonas pusilla CCMP1545] gi|226458799|gb|EEH56096.1| predicted protein [Micromonas pusilla CCMP1545] Length = 408 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 9/118 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L +T ++A Y FTTL G++ + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTLLTELTGTDSEVAAYEFTTLTCIPGVIHYNDAKIQLLDLPGIIEGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G G G + + + + ++L ++ A + E + Y A+ L +++E VGL Sbjct: 125 EGKGRGRQVIAVAKSSDLILMVLDATKSEAANSTY--------AHKEILTRELEAVGL 174 >gi|88603859|ref|YP_504037.1| translation-associated GTPase [Methanospirillum hungatei JF-1] gi|88189321|gb|ABD42318.1| GTP-binding conserved hypothetical protein TIGR00650 [Methanospirillum hungatei JF-1] Length = 389 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 20/105 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN------------------LGIVKE 203 + + G PN GKST + T A +IA+YPFTT+ N G+ + Sbjct: 4 LALAGKPNCGKSTLYRAATMAPAEIANYPFTTIDANRGVAYVRVPCPCTSLAHRCGVCAD 63 Query: 204 G--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G Y L D+ G++ AH G G+G++FL H + ++ ++ A Sbjct: 64 GIRYIAVHLIDVAGLVPEAHTGKGLGNQFLDHLRQADAIIQVIDA 108 >gi|329960606|ref|ZP_08298949.1| GTP-binding protein YchF [Bacteroides fluxus YIT 12057] gi|328532479|gb|EGF59273.1| GTP-binding protein YchF [Bacteroides fluxus YIT 12057] Length = 367 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ +G V E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIDAQMGQVSVPDERLTKLAELVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++K A +G G+G++FL + ++H++ + Sbjct: 66 AVCDIVDIAGLVKGASKGEGLGNQFLGNIRECDAIIHVLRCFD 108 >gi|281206024|gb|EFA80213.1| GTP-binding-like protein [Polysphondylium pallidum PN500] Length = 377 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G+IG P+ GKST L +T + ++A Y FTTL G+++ + L D+PGII+ Sbjct: 74 ARVGLIGFPSVGKSTLLTKLTGTRSEVASYEFTTLTCIPGVIQYNGAKIQLLDLPGIIEG 133 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + +++L ++ A++ V + I EL + L ++ Sbjct: 134 AKDGKGRGRQVIAVGRTCNLILIVLDAMKPLVHK--KIIERELEGFGIRLNRQ 184 >gi|195999682|ref|XP_002109709.1| hypothetical protein TRIADDRAFT_20516 [Trichoplax adhaerens] gi|190587833|gb|EDV27875.1| hypothetical protein TRIADDRAFT_20516 [Trichoplax adhaerens] Length = 366 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 52/95 (54%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L +T + A Y FTTL G+++ + L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTLLNKLTSTFSESASYEFTTLTCIPGVIEHNGAKIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A QG G G + + V+L ++ A + +VQ A Sbjct: 123 AAQGKGRGRQVIAVGRTADVVLMMLDATKGDVQRA 157 >gi|317478031|ref|ZP_07937213.1| GTP-binding protein YchF [Bacteroides sp. 4_1_36] gi|316905820|gb|EFV27592.1| GTP-binding protein YchF [Bacteroides sp. 4_1_36] Length = 367 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ +G V E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIDAQMGQVSVPDERLTKLAELVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++K A +G G+G++FL + ++H++ + Sbjct: 66 AVCDIVDIAGLVKGASKGEGLGNQFLGNIRECDAIIHVLRCFD 108 >gi|47218094|emb|CAG09966.1| unnamed protein product [Tetraodon nigroviridis] Length = 346 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 19/101 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IG++GLPN GKSTF +T+++ ++PF T+ PN + I + Y +F+ Sbjct: 21 IGVVGLPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPIPDQRY-DFLCRIHKPASK 79 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + DI G+++ AH G G+G+ FL H + H+ Sbjct: 80 VPAFLNVVDIAGLVQGAHSGQGLGNAFLSHIAACDGIFHMT 120 >gi|296534469|ref|ZP_06896897.1| GTP-binding protein YchF [Roseomonas cervicalis ATCC 49957] gi|296265203|gb|EFH11400.1| GTP-binding protein YchF [Roseomonas cervicalis ATCC 49957] Length = 364 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 18/107 (16%) Query: 161 DIGIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLG-----------IVKEGYKEF 208 + GI+GLPN GKST F A A + A+YPF T+ PN+G I K G + Sbjct: 4 NCGIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGRVAVPDRRLDAIAKIGKSQK 63 Query: 209 IL------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I+ DI G+++ A +G G+G++FL + T ++H++ E+ Sbjct: 64 IVPTSLEFVDIAGLVRGASRGEGLGNQFLANIRETDAIVHVLRCFED 110 >gi|156083691|ref|XP_001609329.1| GTP binding protein [Babesia bovis T2Bo] gi|154796580|gb|EDO05761.1| GTP binding protein, putative [Babesia bovis] Length = 423 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 36/187 (19%) Query: 162 IGIIGLPNAGKSTFLASV-TRAKPKIADYPFTTLYPNLGI---------VKEGYK----- 206 IG +G P++GKSTF +V K A +PFTT+ PN G+ VK K Sbjct: 7 IGCVGKPSSGKSTFFNAVCVNPNAKTAAHPFTTIEPNHGVAFFTTDCPCVKYNVKCAPSF 66 Query: 207 ----------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQ 256 L D+ G+I A++G GIG++FL VL+HI+ + Sbjct: 67 GSCRNGVRRVPVKLLDVAGLIPGANEGRGIGNKFLDDLRHADVLMHIIDVSGRTNEKGDA 126 Query: 257 CILDELSAYNSELRKKIEIV----GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITG 312 I + S +S L ++IE+ L + T+ L +K N + T S ++G Sbjct: 127 TIGYDPSGDHSWLVEEIELWIYNNLLPKWTTMAKRHLMKKDNAVTTL-------HSKLSG 179 Query: 313 HGIPQIL 319 + +P+ + Sbjct: 180 YMVPETM 186 >gi|289580533|ref|YP_003478999.1| hypothetical protein Nmag_0853 [Natrialba magadii ATCC 43099] gi|289530086|gb|ADD04437.1| GTPase of unknown function domain protein [Natrialba magadii ATCC 43099] Length = 399 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL----------------------YPNLG 199 IG++G P+ GKS+F + T YPFTT+ PN+G Sbjct: 7 IGLVGKPSVGKSSFFNAATMNDVPEGAYPFTTIDPSVGEAYVRVDCAAPEFDEECTPNVG 66 Query: 200 IVKEGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS 245 G + F+ L D+ G+I AH+G G+G++FL T VL+H+V Sbjct: 67 YCDHGTR-FVPTKLVDVAGLIPGAHEGNGLGNQFLSDLNETDVLVHVVD 114 >gi|221121182|ref|XP_002163078.1| PREDICTED: hypothetical protein [Hydra magnipapillata] Length = 431 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKEFI-- 209 +GI+G+PN GKSTF +T+++ ++PF T+ PN V E Y+ Sbjct: 55 VGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERWDFLCEYYQPLSKV 114 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+++ A++G G+G+ FL H + + ++ A +++ Sbjct: 115 PAFLNVVDIAGLVEGANEGQGLGNAFLSHIKACDAIFQMLRAFDDD 160 >gi|15790674|ref|NP_280498.1| translation-associated GTPase [Halobacterium sp. NRC-1] gi|169236414|ref|YP_001689614.1| translation-associated GTPase [Halobacterium salinarum R1] gi|10581205|gb|AAG19978.1| GTP-binding protein homolog [Halobacterium sp. NRC-1] gi|167727480|emb|CAP14268.1| GTP-binding protein [Halobacterium salinarum R1] Length = 396 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 26/108 (24%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG---------------------- 199 +G++G P+ GKSTF + T YPFTT+ P +G Sbjct: 5 VGLVGKPSVGKSTFFNAATNNDVPEGAYPFTTIDPAVGEAYVRVECAAPEFGEECTPATG 64 Query: 200 IVKEGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 ++G + F+ L D+ G+I AH+GAG+G++FL VL+H+V Sbjct: 65 FCEDGTR-FVPTKLVDVAGLIPGAHEGAGLGNQFLTDLNEADVLIHVV 111 >gi|37729656|gb|AAO26205.1| GTP-binding protein [Trypanosoma cruzi] Length = 394 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IGI+GLPN GKSTF +++ + PF T+ PN + I + +++ + Sbjct: 27 IGIVGLPNVGKSTFFNVLSKKGVPAENRPFCTIDPNTADINIPDDRFEKLVKINKPASIV 86 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+++ A G G+G+ FL H ++H++ EE Sbjct: 87 PAQIHIRDIAGLVRGASNGEGLGNAFLSHINECDGIIHMIRVFEE 131 >gi|288958839|ref|YP_003449180.1| GTP-dependent nucleic acid-binding protein [Azospirillum sp. B510] gi|288911147|dbj|BAI72636.1| GTP-dependent nucleic acid-binding protein [Azospirillum sp. B510] Length = 366 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 18/108 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKST ++T + + A++PF T PN+G V K Sbjct: 4 NCGIVGLPNVGKSTLFNALTATQAAEAANFPFCTKEPNVGRVGVPDPRQDKLAEIAKSQK 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+I+ A +G G+G++FL + ++H++ E++ Sbjct: 64 VVPTQLEFVDIAGLIRGASKGEGLGNQFLANIREVDAIVHVLRCFEDD 111 >gi|292489619|ref|YP_003532509.1| GTP-binding protein hflX [Erwinia amylovora CFBP1430] gi|292898161|ref|YP_003537530.1| GTP-binding protein [Erwinia amylovora ATCC 49946] gi|291198009|emb|CBJ45111.1| GTP-binding protein [Erwinia amylovora ATCC 49946] gi|291555056|emb|CBA23139.1| GTP-binding protein hflX [Erwinia amylovora CFBP1430] Length = 426 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 19/176 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L V E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRLTSAEVYAADQLFATLDPTLRRVDVADVGEVVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T +LLHIV A +EEN+ A +L+E+ + + Sbjct: 257 RHLPHDLVAAFKATLQETREAALLLHIVDAADLRIEENIDAV-NVVLEEIESDDIP---- 311 Query: 273 IEIVGLSQIDTVD--SDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D + R + L + S+ TG GIP + + L +++ Sbjct: 312 -SLLVMNKIDMLDGFVPRIDRDEENLPVRVW-----LSAQTGEGIPLLFQALTERL 361 >gi|218131728|ref|ZP_03460532.1| hypothetical protein BACEGG_03349 [Bacteroides eggerthii DSM 20697] gi|317474654|ref|ZP_07933928.1| GTP-binding protein YchF [Bacteroides eggerthii 1_2_48FAA] gi|217986031|gb|EEC52370.1| hypothetical protein BACEGG_03349 [Bacteroides eggerthii DSM 20697] gi|316909335|gb|EFV31015.1| GTP-binding protein YchF [Bacteroides eggerthii 1_2_48FAA] Length = 367 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ +G V E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIDAQMGQVSVPDERLTKLAEIVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++K A +G G+G++FL + ++H++ + Sbjct: 66 AVCDIVDIAGLVKGASKGEGLGNQFLGNIRECDAIIHVLRCFD 108 >gi|195164453|ref|XP_002023062.1| GL16374 [Drosophila persimilis] gi|194105124|gb|EDW27167.1| GL16374 [Drosophila persimilis] Length = 397 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 22/145 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 IGI+G+PN GKSTF +T + ++PF T+ PN + + E + + Sbjct: 24 IGIVGVPNVGKSTFFNVLTESAAPAENFPFCTIKPNESRVPVPDERFDYLVEYHKPASVV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + D+ G++K A +G + + FL H + H+ A E+ +V+ + D Sbjct: 84 PAYLHVVDMAGLVKGAAEGQCLSNDFLSHISACDAIFHLCRAFEDPDVTHVEGEVDPVRD 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVD 285 L + ELR K E L +D ++ Sbjct: 144 -LEIISEELRLKDEEKLLQNLDKLE 167 >gi|331671323|ref|ZP_08372121.1| GTP-binding protein HflX [Escherichia coli TA280] gi|331071168|gb|EGI42525.1| GTP-binding protein HflX [Escherichia coli TA280] Length = 426 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++ NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVAYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A ++EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV-NTVLEEIDAH------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI L ++ +D + + + + S+ TG GIPQ+ + L +++ Sbjct: 309 -EIPTLLVMNKIDMLEDFEPRIDRDEENKPIRVWLSAQTGAGIPQLFQALTERL 361 >gi|150399197|ref|YP_001322964.1| translation-associated GTPase [Methanococcus vannielii SB] gi|150011900|gb|ABR54352.1| GTPase-like protein [Methanococcus vannielii SB] Length = 392 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 33/133 (24%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI------------------ 200 +A +G++G PN GKST ++T + +YPFTT+ PN+G Sbjct: 1 MAILGLVGKPNVGKSTTFNAMTEKVADVGNYPFTTINPNIGTSFVTKPCPCSTLNLKCSP 60 Query: 201 --------VKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA-----L 247 V+ E I D+ G++ +AH+G G+G++FL + + +V A L Sbjct: 61 NNSKCFSGVRNIPVEII--DVAGLVPDAHKGKGMGNKFLDDLRQADAFILVVDASGKTDL 118 Query: 248 EENVQAAYQCILD 260 E N+ + I+D Sbjct: 119 EGNITEDHDPIMD 131 >gi|16763181|ref|NP_458798.1| GTPase HflX [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144660|ref|NP_808002.1| GTPase HflX [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052280|ref|ZP_03345158.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213428671|ref|ZP_03361421.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213612847|ref|ZP_03370673.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213648970|ref|ZP_03379023.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289808968|ref|ZP_06539597.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289829979|ref|ZP_06547430.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25332266|pir||AB1049 HflX protein, probable GTP-binding protein hflX [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505489|emb|CAD06839.1| HflX protein, putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29140299|gb|AAO71862.1| HflX protein, putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 426 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNQITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ + L+ T + +LLH+V A ++EN++A +L+E+ A+ Sbjct: 257 RHLPYDLVAAFKATLQETRQATLLLHVVDAADVRVQENIEAV-NTVLEEIDAHEIPT--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++E + + S+ +G GIPQ+ + L +++ Sbjct: 313 --LMVMNKIDMLDDFEPRIDRDE---ENKPIRVWLSAQSGVGIPQLFQALTERL 361 >gi|319900552|ref|YP_004160280.1| GTP-binding protein YchF [Bacteroides helcogenes P 36-108] gi|319415583|gb|ADV42694.1| GTP-binding protein YchF [Bacteroides helcogenes P 36-108] Length = 367 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ +G V E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIDAQMGQVSVPDERLTKLAELVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++K A +G G+G++FL + ++H++ + Sbjct: 66 AVCDIVDIAGLVKGASKGEGLGNQFLGNIRECDAIIHVLRCFD 108 >gi|145596293|ref|YP_001160590.1| GTP-dependent nucleic acid-binding protein EngD [Salinispora tropica CNB-440] gi|145305630|gb|ABP56212.1| GTP-binding protein YchF [Salinispora tropica CNB-440] Length = 361 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V K Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGLPDERLGKLAEIFSSQKVI 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+++ A +G G G+ FL + + +V A + Sbjct: 65 PAPVSFVDIAGLVRGASKGQGRGNAFLANIRDAAAICQVVRAFSD 109 >gi|290978531|ref|XP_002671989.1| DRG GTPase family protein [Naegleria gruberi] gi|284085562|gb|EFC39245.1| DRG GTPase family protein [Naegleria gruberi] Length = 367 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 49/89 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG++G P+ GKST L +T ++A Y FTTL G++ L D+PGII+ Sbjct: 64 ARIGLVGFPSVGKSTLLNKMTNTFSEVASYEFTTLTCIPGVINYKGARLQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +++L ++ AL+ Sbjct: 124 AKDGKGRGRQVISTARTCNLILIVLDALK 152 >gi|259907179|ref|YP_002647535.1| putative GTPase HflX [Erwinia pyrifoliae Ep1/96] gi|224962801|emb|CAX54258.1| GTP-binding protein HflX [Erwinia pyrifoliae Ep1/96] gi|283476987|emb|CAY72879.1| GTP-binding protein hflX [Erwinia pyrifoliae DSM 12163] gi|310765330|gb|ADP10280.1| putative GTPase HflX [Erwinia sp. Ejp617] Length = 426 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 19/176 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L V E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRLTSAEVYAADQLFATLDPTLRRVDVADVGEVVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T +LLHIV A +EEN+ A +L+E+ + Sbjct: 257 RHLPHDLVAAFKATLQETREAALLLHIVDAADLRIEENIDAV-NVVLEEIESAEIP---- 311 Query: 273 IEIVGLSQIDTVD--SDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D + R + L + S+ TG GIP + + L +++ Sbjct: 312 -SLLVMNKIDMLDGFVPRIDRDEENLPVRVW-----LSAQTGEGIPLLFQALTERL 361 >gi|329956366|ref|ZP_08296963.1| GTP-binding protein YchF [Bacteroides clarus YIT 12056] gi|328524263|gb|EGF51333.1| GTP-binding protein YchF [Bacteroides clarus YIT 12056] Length = 367 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ +G V E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIDAQMGQVSVPDERLTKLAEIVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++K A +G G+G++FL + ++H++ + Sbjct: 66 AVCDIVDIAGLVKGASKGEGLGNQFLGNIRECDAIIHVLRCFD 108 >gi|159039687|ref|YP_001538940.1| GTP-dependent nucleic acid-binding protein EngD [Salinispora arenicola CNS-205] gi|157918522|gb|ABV99949.1| GTP-binding protein YchF [Salinispora arenicola CNS-205] Length = 361 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGI+GLPN GKST ++T+ A+YPF T+ PN+G+V K Sbjct: 5 IGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGLPDERLGKLAEIFDSQKVI 64 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+++ A +G G G+ FL + + +V A + Sbjct: 65 PAPVSFVDIAGLVRGASKGQGRGNAFLANIRDAAAICQVVRAFSD 109 >gi|40180|emb|CAA26490.1| unnamed protein product [Bacillus subtilis] Length = 65 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 36/64 (56%), Positives = 49/64 (76%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ KVY++ GDGG G ++FRREK++ GGP GG GG+GGDV + L TL+DFRY+ Sbjct: 2 FVDQVKVYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGKGGDVVFEVDEGLRTLMDFRYK 61 Query: 63 QHFK 66 +HFK Sbjct: 62 KHFK 65 >gi|308159647|gb|EFO62172.1| GTP-binding protein, putative [Giardia lamblia P15] Length = 406 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 17/100 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF------------- 208 +GI+GLPN GKS +++T+ + +YPF T+ PN V K F Sbjct: 27 MGIVGLPNVGKSLTFSTLTKVQVPSENYPFCTIDPNHARVAVPDKRFEWLCGHFKPKSEV 86 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + DI G+IK A +G G+G+ FL H + + H+V Sbjct: 87 STFLDITDIAGLIKGASEGNGLGNAFLSHIKAVDGIYHVV 126 >gi|86148233|ref|ZP_01066530.1| GTP-binding protein HflX [Vibrio sp. MED222] gi|218708324|ref|YP_002415945.1| putative GTPase HflX [Vibrio splendidus LGP32] gi|85834003|gb|EAQ52164.1| GTP-binding protein HflX [Vibrio sp. MED222] gi|218321343|emb|CAV17293.1| GTP-binding protein HflX [Vibrio splendidus LGP32] Length = 435 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 15/176 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L + ILAD G I Sbjct: 197 IPTISLVGYTNAGKSTLFNRITSAGVYAADQLFATLDPTLRKIDLADVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T+ +LLH+V A EN+QA ++ +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETQEADILLHVVDASDDRFRENIQAVHE-VLEEIDAH------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 E+ L ++ +D + + E + S++ G GI + E L +++ S Sbjct: 309 -EVPTLVVMNKIDCMEDQKPRIERDEEGAPRAVWVSAMEGEGIELLFEALTERLAS 363 >gi|224000950|ref|XP_002290147.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973569|gb|EED91899.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 379 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 19/109 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPN-------------LGIVKEGYK- 206 + ++GLPN GKST ++ + + A+YPF T+ PN L + K Sbjct: 5 VALVGLPNTGKSTLFNAIAQQSIAESANYPFCTIEPNTTPIPIPDDNLPKLATLANSKKA 64 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV-SALEENV 251 + L D+ G++K A +G G+G+RFL +++H+V S ++E+V Sbjct: 65 LNAKIFLVDVAGLVKGASRGEGLGNRFLATVRECDLIIHVVRSYIDEDV 113 >gi|253747636|gb|EET02224.1| GTP-binding protein, putative [Giardia intestinalis ATCC 50581] Length = 406 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 17/100 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF------------- 208 +GI+GLPN GKS +++T+ + +YPF T+ PN V K F Sbjct: 27 MGIVGLPNVGKSLTFSTLTKVQVPSENYPFCTIDPNHARVAVPDKRFEWLCEHFKPKSEV 86 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + DI G+IK A +G G+G+ FL H + + H+V Sbjct: 87 STFLDITDIAGLIKGASEGNGLGNAFLSHIKAVDGIYHVV 126 >gi|159115573|ref|XP_001708009.1| GTP-binding protein, putative [Giardia lamblia ATCC 50803] gi|157436118|gb|EDO80335.1| GTP-binding protein, putative [Giardia lamblia ATCC 50803] Length = 406 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 17/100 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF------------- 208 +GI+GLPN GKS +++T+ + +YPF T+ PN V K F Sbjct: 27 MGIVGLPNVGKSLTFSTLTKVQVPSENYPFCTIDPNHARVAVPDKRFEWLCGHFKPKSEV 86 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + DI G+IK A +G G+G+ FL H + + H+V Sbjct: 87 STFLDITDIAGLIKGASEGNGLGNAFLSHIKAVDGIYHVV 126 >gi|217977793|ref|YP_002361940.1| GTP-dependent nucleic acid-binding protein EngD [Methylocella silvestris BL2] gi|217503169|gb|ACK50578.1| GTP-binding protein YchF [Methylocella silvestris BL2] Length = 365 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A A + A+YPF T+ PN+G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGDVAVPDPRIEILARIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + + H+V E++ Sbjct: 66 PTRLTFVDIAGLVRGASKGEGLGNQFLANIRECDAIAHVVRCFEDD 111 >gi|83859633|ref|ZP_00953153.1| GTP-binding protein [Oceanicaulis alexandrii HTCC2633] gi|83851992|gb|EAP89846.1| GTP-binding protein [Oceanicaulis alexandrii HTCC2633] Length = 365 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A A + A+YPF T+ PN+G V G I Sbjct: 6 GIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGEVAVPEPRLMKLAEIAGSANII 65 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI G++K A QG G+G++FL + T +L+++ E++ Sbjct: 66 PARMNFVDIAGLVKGASQGEGLGNQFLANIRETDAILYVLRCFEDD 111 >gi|212709954|ref|ZP_03318082.1| hypothetical protein PROVALCAL_01005 [Providencia alcalifaciens DSM 30120] gi|212687363|gb|EEB46891.1| hypothetical protein PROVALCAL_01005 [Providencia alcalifaciens DSM 30120] Length = 426 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKS+ +T A AD F TL P L + + +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSSLFNRMTSADVYAADQLFATLDPTLRRIDVDDVGTVVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T ++LLH++ A L+EN+QA +L+E+ A Sbjct: 257 RHLPHDLVAAFKATLQETREANLLLHVIDAVDVRLDENIQAV-NSVLEEIDANEIP---- 311 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ ++++D +D ++E V S+ TG GIP +L+ L +++ Sbjct: 312 -TLLVMNKVDMLDDFVPRIDRDE---DNKPVRVWVSAQTGEGIPLLLQALTERL 361 >gi|330841621|ref|XP_003292793.1| hypothetical protein DICPUDRAFT_83396 [Dictyostelium purpureum] gi|325076948|gb|EGC30695.1| hypothetical protein DICPUDRAFT_83396 [Dictyostelium purpureum] Length = 394 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL---GIVKEGYKEFI--------- 209 +GI+GLPN GKS+ +T+ ++PF T+ PNL + E Y + Sbjct: 26 MGIVGLPNVGKSSLFNILTKMSIPAENFPFCTIDPNLSRCAVPDERYDWLVEHWKPASKV 85 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++ A +G G+G+ FL H + + H++ E++ Sbjct: 86 PAYLQITDIAGLVSGASEGKGLGNAFLSHIQAVDGIFHMIRVFEDS 131 >gi|225713932|gb|ACO12812.1| Obg-like ATPase 1 [Lepeophtheirus salmonis] Length = 328 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 21/131 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLG--IVKEGYKEFIL--------- 210 GI+GLPN GKSTF +T+ + A+ PF T+ PN V + +F++ Sbjct: 8 GILGLPNVGKSTFFNVLTKTQIAAAENLPFCTIDPNESRVPVPDARFDFLVDFHKPASKV 67 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 DI G++K A +G G+G+ FL H + LLH+ E+ + +D + Sbjct: 68 PAFLNVTDIAGLVKGASEGQGLGNAFLSHIKACDALLHLCRTFEDKEITHIEGEVDPVRD 127 Query: 262 LSAYNSELRKK 272 L N ELR K Sbjct: 128 LDIINEELRLK 138 >gi|221052840|ref|XP_002261143.1| GTP-binding protein [Plasmodium knowlesi strain H] gi|194247147|emb|CAQ38331.1| GTP-binding protein, putative [Plasmodium knowlesi strain H] Length = 392 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 17/118 (14%) Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEG 204 ++K++ + K +G++GLPN GKST +T+ +YPF T+ P+ + + E Sbjct: 9 EQKVLLGRPKNTLKMGLVGLPNVGKSTTFNVLTKLNIPAENYPFCTIDPHEAKVTVEDER 68 Query: 205 YKEFI--------------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + + + DI G++KNAH G G+G+ FL + + H+V A E Sbjct: 69 FDWLVSHFKPKSNVHAYLSIFDIAGLVKNAHLGEGLGNNFLSNIAAVDGIYHVVRAFE 126 >gi|328773871|gb|EGF83908.1| hypothetical protein BATDEDRAFT_36387 [Batrachochytrium dendrobatidis JAM81] Length = 366 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 48/87 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L+ T K ++A Y FTTL G + + L D+PGII+ Sbjct: 63 ARVAMVGFPSVGKSTLLSKTTETKSEVASYEFTTLTCIPGKINYNGAQIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 A QG G G + + + ++L ++ A Sbjct: 123 ASQGKGRGRQVIAVAKTADLILMMLDA 149 >gi|150401872|ref|YP_001325638.1| translation-associated GTPase [Methanococcus aeolicus Nankai-3] gi|150014575|gb|ABR57026.1| GTPase-like protein [Methanococcus aeolicus Nankai-3] Length = 393 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 24/112 (21%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG------------------- 199 +A +GI+G PN GKST ++T I +YPFTT+ PN+G Sbjct: 1 MAILGIVGKPNVGKSTLFNAMTEKVADIGNYPFTTINPNVGTSFVSSECPCVELDIQCNP 60 Query: 200 -----IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 I Y + D+ G++ AH+G G+G++FL + + +V A Sbjct: 61 NNSKCIDGTRYVPVEIIDVAGLVPEAHKGKGMGNKFLDDLRQADAFIVVVDA 112 >gi|254167849|ref|ZP_04874698.1| GTPase, putative [Aciduliprofundum boonei T469] gi|254167860|ref|ZP_04874709.1| GTPase, putative [Aciduliprofundum boonei T469] gi|289596633|ref|YP_003483329.1| small GTP-binding protein [Aciduliprofundum boonei T469] gi|197623140|gb|EDY35706.1| GTPase, putative [Aciduliprofundum boonei T469] gi|197623151|gb|EDY35717.1| GTPase, putative [Aciduliprofundum boonei T469] gi|289534420|gb|ADD08767.1| small GTP-binding protein [Aciduliprofundum boonei T469] Length = 365 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 3/113 (2%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS +T AK +ADY FTTL + GI+K E L D+PG+I+ Sbjct: 62 AMVSLIGPPSVGKSMLFNILTNAKSTVADYAFTTLEIHPGILKHKGAEIQLLDMPGLIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G L + +++ ++ + + IL+EL + + +K Sbjct: 122 ASYGKGNGKEILSVARNSDLIMLVLDVYTVDY---LEVILNELHNFGIRVNEK 171 >gi|167764022|ref|ZP_02436149.1| hypothetical protein BACSTE_02405 [Bacteroides stercoris ATCC 43183] gi|167698138|gb|EDS14717.1| hypothetical protein BACSTE_02405 [Bacteroides stercoris ATCC 43183] Length = 367 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------- 209 GI+GLPN GKST ++ AK + A++PF T+ +G V E + Sbjct: 6 GIVGLPNVGKSTLFNCLSSAKAQAANFPFCTIDAQMGQVSVPDERLTKLAEIVHPGRIVP 65 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++K A +G G+G++FL + ++H++ + Sbjct: 66 AVCDIVDIAGLVKGASKGEGLGNQFLGNIRECDAIIHVLRCFD 108 >gi|124511984|ref|XP_001349125.1| conserved GTP-binding protein, putative [Plasmodium falciparum 3D7] gi|23498893|emb|CAD50971.1| conserved GTP-binding protein, putative [Plasmodium falciparum 3D7] Length = 393 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 17/104 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +G++GLPN GKST +T+ +YPF T+ P+ + + E ++ + Sbjct: 24 MGLVGLPNVGKSTTFNVLTKLNIPAENYPFCTIDPHEAKVTVEDERFEWLVKHFNPKSNV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++KNAH G G+G+ FL + + H+V A E Sbjct: 84 HAYLSIFDIAGLVKNAHLGEGLGNNFLSNIAAVDGIYHVVRAFE 127 >gi|71747732|ref|XP_822921.1| developmentally regulated GTP-binding protein [Trypanosoma brucei] gi|70832589|gb|EAN78093.1| developmentally regulated GTP-binding protein, putative [Trypanosoma brucei] gi|261332746|emb|CBH15741.1| developmentally regulated GTP-binding protein,putative [Trypanosoma brucei gambiense DAL972] Length = 368 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 4/114 (3%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG IG P+ GKST L +T ++A Y FTTL G+V + + D+PGII+ Sbjct: 64 ARIGFIGFPSVGKSTLLTKLTSTHSEVAAYEFTTLTCVPGVVSYRGAKLQMLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-ELSAYNSELRKK 272 A G G G + + RT L+ IV + + +Q ++ I++ EL + L KK Sbjct: 124 AKDGKGRGRQVIA-VARTCSLILIVLDIAKPLQ--HKLIIERELDGFGIRLNKK 174 >gi|302422762|ref|XP_003009211.1| GTP-binding protein [Verticillium albo-atrum VaMs.102] gi|261352357|gb|EEY14785.1| GTP-binding protein [Verticillium albo-atrum VaMs.102] Length = 574 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 37/148 (25%) Query: 152 IWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYK---- 206 +W + + + P ST L +++ ++ ++ ++ FTTL PN+G +V + YK Sbjct: 297 VWRSRQPTLRLSRVPTP---PSTLLRALSNSRTRVGNWAFTTLQPNIGTVVLDSYKGRPV 353 Query: 207 -----------------------------EFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 F +ADIPG+I+ AH G+G FL+H ER Sbjct: 354 MRSFKRAPSTENGGVLPADEHEQQAEARTRFTIADIPGLIEGAHLDRGLGIAFLRHVERA 413 Query: 238 HVLLHIVSALEENVQAAYQCILDELSAY 265 VL ++ N AA + +E+ Y Sbjct: 414 GVLAFVIDLSAGNAVAALDALWNEVGLY 441 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 66/104 (63%), Gaps = 3/104 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F D+A + + +G GG G ISF R+ F+ G P+GG+GG GG+++IQA +L + Sbjct: 70 FADKASLTLYAGGGGNGCISFLRDMFLPEGPPNGGNGGHGGNIYIQAVHGETSLHKLARK 129 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGT---QVFEEDGIS 103 + +A+ G+ G ++G +GED+++TVPVGT ++ ED ++ Sbjct: 130 RFIRAERGKNGQGSAKAGQRGEDIIITVPVGTILREISREDPVA 173 >gi|261345214|ref|ZP_05972858.1| GTP-binding protein HflX [Providencia rustigianii DSM 4541] gi|282566909|gb|EFB72444.1| GTP-binding protein HflX [Providencia rustigianii DSM 4541] Length = 426 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 19/176 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKS+ +T A AD F TL P L + +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSSLFNRMTSADVYAADQLFATLDPTLRRIDVNDVGTVVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T +LLH++ A L+EN+QA + +L+E+ A Sbjct: 257 RHLPHDLVAAFKATLQETREATLLLHVIDAADNRLDENIQAV-ESVLEEIEAN------- 308 Query: 273 IEIVGLSQIDTVD--SDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI L ++ VD D + R + + +V S+ TG GIP +L+ L +++ Sbjct: 309 -EIPTLLVMNKVDMLEDFVPRIDRDEDNKPARV--WVSAQTGEGIPLLLQALTERL 361 >gi|311281275|ref|YP_003943506.1| GTP-binding proten HflX [Enterobacter cloacae SCF1] gi|308750470|gb|ADO50222.1| GTP-binding proten HflX [Enterobacter cloacae SCF1] Length = 426 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNQITEAQVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A L+EN+ A +LDE+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRLQENIDAV-NVVLDEIEANEIP---- 311 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D +++ + V S+ TG G+P + + L +++ Sbjct: 312 -TLLVMNKIDMLDDFEPRIDRDD---ENKPVRVWLSAQTGVGVPLLFQALTERL 361 >gi|302843776|ref|XP_002953429.1| hypothetical protein VOLCADRAFT_105955 [Volvox carteri f. nagariensis] gi|300261188|gb|EFJ45402.1| hypothetical protein VOLCADRAFT_105955 [Volvox carteri f. nagariensis] Length = 391 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 22/132 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----------------KEGY 205 +GI+G+PN GKST +T+ ++PF T+ PN V K Sbjct: 24 MGIVGMPNVGKSTLFNLLTKVGVPAENFPFCTIDPNAARVNVPDERFNWLCSLYKPKSAV 83 Query: 206 KEFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 F+ + DI G+++ A QG G+G+ FL H + H+ A E+ +V+ + D Sbjct: 84 SAFLDVVDIAGLVRGAAQGEGLGNAFLSHIAAVDGIYHVCRAFEDADVIHVEDRVDPVAD 143 Query: 261 ELSAYNSELRKK 272 L + ELR K Sbjct: 144 -LEIIHKELRAK 154 >gi|213416844|ref|ZP_03349988.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 377 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 148 VPTVSLVGYTNAGKSTLFNQITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 207 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ + L+ T + +LLH+V A ++EN++A +L+E+ A+ Sbjct: 208 RHLPYDLVAAFKATLQETRQATLLLHVVDAADVRVQENIEAV-NTVLEEIDAHEIP---- 262 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++E + + S+ +G GIPQ+ + L +++ Sbjct: 263 -TLMVMNKIDMLDDFEPRIDRDE---ENKPIRVWLSAQSGVGIPQLFQALTERL 312 >gi|82705616|ref|XP_727043.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23482702|gb|EAA18608.1| GTP-binding-like protein [Plasmodium yoelii yoelii] Length = 365 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 4/114 (3%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG++G P+ GKST L +T ++A Y FTTL GI K + L D+PGII+ Sbjct: 63 ARIGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCVPGIFKYKGAKMQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-ELSAYNSELRKK 272 A G G G + + + ++L ++ AL+ +++ I++ EL + L KK Sbjct: 123 AKDGKGRGKQVIAVAKSCSLILIVLDALKP---LSFKKIIEKELEGFGIRLNKK 173 >gi|213583633|ref|ZP_03365459.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 274 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 45 VPTVSLVGYTNAGKSTLFNQITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 104 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ + L+ T + +LLH+V A ++EN++A +L+E+ A+ Sbjct: 105 RHLPYDLVAAFKATLQETRQATLLLHVVDAADVRVQENIEAV-NTVLEEIDAHEIPT--- 160 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++E + + S+ +G GIPQ+ + L +++ Sbjct: 161 --LMVMNKIDMLDDFEPRIDRDE---ENKPIRVWLSAQSGVGIPQLFQALTERL 209 >gi|329764901|ref|ZP_08256491.1| small GTP-binding protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138613|gb|EGG42859.1| small GTP-binding protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 369 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 47/89 (52%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + IGLP+ GKST L +T AK + Y FTTL G++ + + D+PGIIK Sbjct: 64 ATVVFIGLPSVGKSTLLNKLTDAKSAVGAYQFTTLTVVPGMMDYRGAKIQVLDLPGIIKG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G+G R L ++L ++ + Sbjct: 124 ASSGKGLGKRILSVARSADLVLLVLDVFQ 152 >gi|308502265|ref|XP_003113317.1| hypothetical protein CRE_25413 [Caenorhabditis remanei] gi|308265618|gb|EFP09571.1| hypothetical protein CRE_25413 [Caenorhabditis remanei] Length = 366 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L+S+T + A Y FTTL G++ L D+PGII+ Sbjct: 63 ARVAMVGFPSVGKSTLLSSMTSTHSEAAGYEFTTLTCIPGVISYNGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A QG G G + + + ++L ++ A + + Q + EL A L KK Sbjct: 123 ASQGKGRGRQVISVAKTADLILMMLDAGKSDQQK--MLLERELEAVGIRLNKK 173 >gi|163851896|ref|YP_001639939.1| translation-associated GTPase [Methylobacterium extorquens PA1] gi|163663501|gb|ABY30868.1| GTP-binding protein YchF [Methylobacterium extorquens PA1] Length = 365 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 32/194 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A A + A+YPF T+ PN+G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGEVAVPDPRLDDLARIASSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 DI G+++ A +G G+G++FL + + H+V E+ +V+ I D Sbjct: 66 PTRLTFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVVRCFEDGDVTHVEGKVDPIAD 125 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +EL L+ +D+++ +A +K A + EF + +P + E Sbjct: 126 -IETIETELM-------LADLDSLEKRVVALEKR--AKGADKEAKEFLDLVNRALPLLRE 175 Query: 321 CLHDKIFSIRGENE 334 ++ + E E Sbjct: 176 GKPARLVERKPEEE 189 >gi|71981008|ref|NP_498808.2| hypothetical protein C02F5.3 [Caenorhabditis elegans] gi|47117846|sp|P34280|YKK3_CAEEL RecName: Full=Uncharacterized GTP-binding protein C02F5.3 gi|38638838|gb|AAR25659.1| Hypothetical protein C02F5.3 [Caenorhabditis elegans] Length = 366 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L+S+T + A Y FTTL G++ L D+PGII+ Sbjct: 63 ARVAMVGFPSVGKSTLLSSMTSTHSEAAGYEFTTLTCIPGVISYNGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A QG G G + + + ++L ++ A + + Q + EL A L KK Sbjct: 123 ASQGKGRGRQVISVAKTADLILMMLDAGKSDQQK--MLLERELEAVGIRLNKK 173 >gi|328769466|gb|EGF79510.1| hypothetical protein BATDEDRAFT_12200 [Batrachochytrium dendrobatidis JAM81] Length = 425 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-----------------IVKEG 204 I +G P+AGKS+FL +++ A K+ ++PFTT+ PN G + K Sbjct: 7 IACVGKPSAGKSSFLNAISDATAKVGNFPFTTIKPNQGMAYVLIDCPCSRFDKQSLCKPR 66 Query: 205 YKEFI---------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 Y + + + D+ G++ A QG G+G++FL L+H+V Sbjct: 67 YGKCVQGKRHVPIKILDVAGLVPGASQGNGLGNQFLDDLRTADALIHVV 115 >gi|296100940|ref|YP_003611086.1| putative GTPase HflX [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055399|gb|ADF60137.1| putative GTPase HflX [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 426 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 13/173 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNQITEAQVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKI 273 ++ H L+ T + +LLH++ A + VQ A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIDAVNVVLEEIEAHEIP----- 311 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++E + + S+ TG G+P + + L +++ Sbjct: 312 TLLVMNKIDMLDDFEPRIDRDE---ENKPIRVWLSAQTGIGVPLLFQALTERL 361 >gi|209875409|ref|XP_002139147.1| developmentally regulated GTP-binding protein 2 [Cryptosporidium muris RN66] gi|209554753|gb|EEA04798.1| developmentally regulated GTP-binding protein 2, putative [Cryptosporidium muris RN66] Length = 368 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 50/93 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L T A+ IA Y FTTL G++K + L D+PGII+ Sbjct: 63 ARVVLIGFPSVGKSTLLCETTGAESAIAAYEFTTLTCVPGVMKYNNAKIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A G G G + + + ++L ++ ++ Q Sbjct: 123 AASGRGRGRQVIAVAQSADLILMVLDCTKDESQ 155 >gi|302815793|ref|XP_002989577.1| hypothetical protein SELMODRAFT_235812 [Selaginella moellendorffii] gi|300142755|gb|EFJ09453.1| hypothetical protein SELMODRAFT_235812 [Selaginella moellendorffii] Length = 371 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 11/121 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +G++G P+ GKST L +T ++A Y FTTL G++K + L D+PGII+ A Sbjct: 67 VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVIKYRGAKIQLLDLPGIIEGAK 126 Query: 222 QGAGIGDRFLKHTERTH-----------VLLHIVSALEENVQAAYQCILDELSAYNSELR 270 G G G ++ K+ + H H A +A+ C LD LS + +R Sbjct: 127 DGKGRGRQYRKNLQLHHHSSGRNQAHYTQEAHRERARRIWNKASLLCFLDSLSLHCLRMR 186 Query: 271 K 271 K Sbjct: 187 K 187 >gi|289192191|ref|YP_003458132.1| GTPase of unknown function domain protein [Methanocaldococcus sp. FS406-22] gi|288938641|gb|ADC69396.1| GTPase of unknown function domain protein [Methanocaldococcus sp. FS406-22] Length = 391 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------VKEG---- 204 IG++G PN GKST ++T +I +YPFTT+ PN GI VK Sbjct: 2 IGLVGKPNVGKSTMFNALTEKPAEIGNYPFTTIQPNKGIAYITSPCPCRELGVKCNPRNS 61 Query: 205 -------YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 Y + D+ G++ AH+G G+G++FL + + +V A Sbjct: 62 KCIDGIRYIPVEVIDVAGLVPGAHEGRGMGNKFLDDLRQADAFILVVDA 110 >gi|68067551|ref|XP_675731.1| developmentally regulated GTP-binding protein 1, [Plasmodium berghei strain ANKA] gi|56495086|emb|CAH97612.1| developmentally regulated GTP-binding protein 1, putative [Plasmodium berghei] Length = 365 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 4/114 (3%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG++G P+ GKST L +T ++A Y FTTL GI K + L D+PGII+ Sbjct: 63 ARIGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCVPGIFKYKGAKMQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-ELSAYNSELRKK 272 A G G G + + + ++L ++ AL+ +++ I++ EL + L KK Sbjct: 123 AKDGKGRGKQVIAVAKSCSLILIVLDALKP---LSFKKIIEKELEGFGIRLNKK 173 >gi|71661506|ref|XP_817773.1| GTP-binding protein [Trypanosoma cruzi strain CL Brener] gi|70882985|gb|EAN95922.1| GTP-binding protein, putative [Trypanosoma cruzi] Length = 394 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +GI+GLPN GKSTF +++ + PF T+ PN + I + +++ + Sbjct: 27 VGIVGLPNVGKSTFFNVLSKKGVPAENRPFCTIDPNTADINIPDDRFEKLVKINKPASIV 86 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+++ A G G+G+ FL H ++H++ EE Sbjct: 87 PAQIHIRDIAGLVRGASNGEGLGNAFLSHINECDGIIHMIRVFEE 131 >gi|218530647|ref|YP_002421463.1| GTP-dependent nucleic acid-binding protein EngD [Methylobacterium chloromethanicum CM4] gi|240139019|ref|YP_002963494.1| putative GTP-binding protein with nucleoside triP hydrolase domain [Methylobacterium extorquens AM1] gi|218522950|gb|ACK83535.1| GTP-binding protein YchF [Methylobacterium chloromethanicum CM4] gi|240008991|gb|ACS40217.1| putative GTP-binding protein with nucleoside triP hydrolase domain [Methylobacterium extorquens AM1] Length = 365 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 32/194 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A A + A+YPF T+ PN+G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGEVAVPDPRLDDLARIASSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 DI G+++ A +G G+G++FL + + H+V E+ +V+ I D Sbjct: 66 PTRLTFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVVRCFEDGDVTHVEGKVDPIAD 125 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +EL L+ +D+++ +A +K A + EF + +P + E Sbjct: 126 -IETIETELM-------LADLDSLEKRVVALEKR--AKGADKEAKEFLDLVNRALPLLRE 175 Query: 321 CLHDKIFSIRGENE 334 ++ + E E Sbjct: 176 GKPARLVERKPEEE 189 >gi|15669522|ref|NP_248333.1| translation-associated GTPase [Methanocaldococcus jannaschii DSM 2661] gi|41018426|sp|Q58728|Y1332_METJA RecName: Full=Uncharacterized GTP-binding protein MJ1332 gi|1591973|gb|AAB99340.1| GTP-binding protein, member of GTP1/OBG-family [Methanocaldococcus jannaschii DSM 2661] Length = 393 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 24/112 (21%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-------------VK--- 202 +A IG++G PN GKST ++T +I +YPFTT+ PN GI VK Sbjct: 1 MAMIGLVGKPNVGKSTMFNALTEKPAEIGNYPFTTIQPNKGIAYITSPCPCKELGVKCNP 60 Query: 203 ------EGYKEFILA--DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 +G + + D+ G++ AH+G G+G++FL + + +V A Sbjct: 61 RNSKCIDGIRHIPVEVIDVAGLVPGAHEGRGMGNKFLDDLRQADAFILVVDA 112 >gi|300120969|emb|CBK21211.2| unnamed protein product [Blastocystis hominis] Length = 414 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 23/151 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF------------- 208 IGI+G+PN GKS+ +++ +YPF T+ PN+ V + F Sbjct: 44 IGIVGMPNVGKSSLFNDLSKLNVPAENYPFCTIDPNVARVPVPDERFDYMVQAFKPKSEV 103 Query: 209 ----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G++K A +GAG+G+ FL H + ++ + +V+ + + D Sbjct: 104 SAVLQITDIAGLVKGASEGAGLGNAFLSHIRAVDAIFQVLRCFDSKNVTHVEGSVDPVRD 163 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLAR 291 + L+K IE + +Q++++ + ++AR Sbjct: 164 MDIIRDELLKKDIETIQ-NQVESM-AKSVAR 192 >gi|227326198|ref|ZP_03830222.1| putative GTPase HflX [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 426 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 23/178 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST +T A AD F TL P L ++ + + +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNKITSAGVYAADQLFATLDPTLRRIEVDDVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCI----LDELSAYNSE 268 + H L+ T + +LLH+V A L+EN+ A + + DE+ A Sbjct: 257 RQLPHDLVAAFKATLQETRQASLLLHVVDAADPRLDENIDAVHDVLAEIEADEIPA---- 312 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D +NE + V S+ TG GIP + + L +++ Sbjct: 313 ------LLVMNKIDMLDDFVPRIDRNE---ENLPVRVWLSAQTGDGIPLLFQALTERL 361 >gi|50122853|ref|YP_052020.1| putative GTPase HflX [Pectobacterium atrosepticum SCRI1043] gi|49613379|emb|CAG76830.1| putative GTP-binding phage-related protein [Pectobacterium atrosepticum SCRI1043] Length = 426 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 23/178 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST +T A +AD F TL P L ++ + + +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNKITSAGVYVADQLFATLDPTLRRIQVDDVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCI----LDELSAYNSE 268 + H L+ T + +LLH+V A L+EN+ A + DE+ A Sbjct: 257 RQLPHDLVAAFKATLQETRQASLLLHVVDAADPRLDENIDAVNDVLAEIEADEIPA---- 312 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D +NE + + S+ TG GIP + + L +++ Sbjct: 313 ------LLVMNKIDMLDDFVPRIDRNE---ENLPIRVWLSAQTGDGIPLLFQALTERL 361 >gi|63054708|ref|NP_595225.2| GTP binding protein Gtp1 [Schizosaccharomyces pombe 972h-] gi|157310391|emb|CAA19048.3| GTP binding protein Gtp1 [Schizosaccharomyces pombe] Length = 363 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/66 (42%), Positives = 40/66 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + IG P+ GKST L+++T+ K A Y FTTL G+++ E + D+PGII+ Sbjct: 63 ARVAFIGFPSVGKSTLLSAITKTKSATASYEFTTLTAIPGVLEYDGAEIQMLDLPGIIEG 122 Query: 220 AHQGAG 225 A QG G Sbjct: 123 ASQGRG 128 >gi|149022239|gb|EDL79133.1| similar to RIKEN cDNA 2810409H07, isoform CRA_a [Rattus norvegicus] gi|149022240|gb|EDL79134.1| similar to RIKEN cDNA 2810409H07, isoform CRA_a [Rattus norvegicus] Length = 388 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 17/89 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKSTF +T ++ ++PF T+ PN V + F Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQCHKPASKI 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKH 233 + DI G++K AH G G+G+ FL H Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSH 113 >gi|71649554|ref|XP_813495.1| GTP-binding protein [Trypanosoma cruzi strain CL Brener] gi|70878383|gb|EAN91644.1| GTP-binding protein, putative [Trypanosoma cruzi] Length = 394 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +GI+GLPN GKSTF +++ + PF T+ PN + I + +++ + Sbjct: 27 VGIVGLPNVGKSTFFNVLSKKGVPAENRPFCTIDPNTADINIPDDRFEKLVKINKPASIV 86 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+++ A G G+G+ FL H ++H++ EE Sbjct: 87 PTQVHIRDIAGLVRGASNGEGLGNAFLSHINECDGIIHMIRVFEE 131 >gi|225712820|gb|ACO12256.1| Obg-like ATPase 1 [Lepeophtheirus salmonis] Length = 398 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 21/131 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLG--IVKEGYKEFIL--------- 210 GI+GLPN GKSTF +T+ + A+ +PF T+ PN V + +F++ Sbjct: 26 GIVGLPNVGKSTFFNVLTKTQIAAAENFPFCTIDPNESRVPVPDARFDFLVDFHKPASKV 85 Query: 211 ------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 DI G++K A +G G+G+ L H + LLH+ E+ + +D + Sbjct: 86 PAFLNVTDIAGLVKGASEGQGLGNASLSHIKACDALLHLCRTFEDKEITHIEGEVDPVRD 145 Query: 262 LSAYNSELRKK 272 L N ELR K Sbjct: 146 LDIINEELRLK 156 >gi|12644208|sp|P32235|GTP1_SCHPO RecName: Full=GTP-binding protein 1 Length = 364 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/66 (42%), Positives = 40/66 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + IG P+ GKST L+++T+ K A Y FTTL G+++ E + D+PGII+ Sbjct: 63 ARVAFIGFPSVGKSTLLSAITKTKSATASYEFTTLTAIPGVLEYDGAEIQMLDLPGIIEG 122 Query: 220 AHQGAG 225 A QG G Sbjct: 123 ASQGRG 128 >gi|224070823|ref|XP_002303251.1| predicted protein [Populus trichocarpa] gi|222840683|gb|EEE78230.1| predicted protein [Populus trichocarpa] Length = 400 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 2/111 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L +T + A Y FTTL GI+ + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIEGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 +G G G + + ++ + ++L ++ A + Q + EL A L K+ Sbjct: 125 EGKGRGRQVIAVSKSSDIVLMVLDA--SKSEGHRQILTRELEAVGLRLNKR 173 >gi|254561614|ref|YP_003068709.1| GTP-binding protein with nucleoside triP hydrolase domain [Methylobacterium extorquens DM4] gi|254268892|emb|CAX24853.1| putative GTP-binding protein with nucleoside triP hydrolase domain [Methylobacterium extorquens DM4] Length = 365 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 32/194 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A A + A+YPF T+ PN+G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGEVAVPDPRLDDLARIASSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 DI G+++ A +G G+G++FL + + H+V E+ +V+ I D Sbjct: 66 PTRLTFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVVRCFEDGDVTHVEGKVDPIAD 125 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +EL L+ +D+++ +A +K A + EF + +P + E Sbjct: 126 -IETIETELM-------LADLDSLEKRVVALEKR--AKGADKEAKEFLDLVNRALPLLRE 175 Query: 321 CLHDKIFSIRGENE 334 ++ + E E Sbjct: 176 GKPARLVERKPEEE 189 >gi|156087895|ref|XP_001611354.1| GTP-binding protein YchF domain containing protein [Babesia bovis] gi|154798608|gb|EDO07786.1| GTP-binding protein YchF domain containing protein [Babesia bovis] Length = 393 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +G++GLPN GKST +++ ++PF T+ P+ ++ KE Sbjct: 25 MGLVGLPNVGKSTTFNLLSKQMVPAENFPFCTINPHEAVINVPDERFKHLCKVFQPKKEI 84 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+++ AH+G G+G+ FL H + + H+V E++ Sbjct: 85 AASLSIFDIAGLVRGAHKGEGLGNAFLSHIDAVDGIYHVVRGFEDD 130 >gi|123415144|ref|XP_001304632.1| GTP-binding protein 128UP [Trichomonas vaginalis G3] gi|121886098|gb|EAX91702.1| GTP-binding protein 128UP, putative [Trichomonas vaginalis G3] Length = 371 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG+ G P+ GKST L ++T K+A Y FTTL P GI+ + + D+PGI++ Sbjct: 68 ARIGLFGFPSVGKSTLLNALTGQSSKVAAYEFTTLTPVPGILNINGAKIQILDLPGILEG 127 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + ++L ++ ++ + + EL+ Y +L K+ Sbjct: 128 AADGYGRGKQVISIARTCSLILMVLDGMKS--LDLVKILEKELAGYGIKLNKQ 178 >gi|254417868|ref|ZP_05031592.1| GTP-binding protein YchF [Brevundimonas sp. BAL3] gi|196184045|gb|EDX79021.1| GTP-binding protein YchF [Brevundimonas sp. BAL3] Length = 364 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 18/90 (20%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 + I+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE Sbjct: 5 VAIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGDVAVPEPRLNALAEVAGSKEI 64 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKH 233 I A D+ G+++ A +G G+G++FL + Sbjct: 65 IPARITFVDVAGLVRGASKGEGLGNQFLAN 94 >gi|23009178|ref|ZP_00050324.1| COG0012: Predicted GTPase, probable translation factor [Magnetospirillum magnetotacticum MS-1] Length = 191 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A A + A+YPF T+ PN+G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGEVAVPDPRLDDLARIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+++ A +G G+G++FL + + H+V E+ Sbjct: 66 PTRLTFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVVRCFED 110 >gi|315230467|ref|YP_004070903.1| GTP-binding protein [Thermococcus barophilus MP] gi|315183495|gb|ADT83680.1| GTP-binding protein [Thermococcus barophilus MP] Length = 346 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 26/183 (14%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + I I G PN GKST L +T AKP++A YPFTT N+G +E + ++ + D PG++ Sbjct: 167 LPTIVIAGHPNVGKSTLLRQLTNAKPEVASYPFTTKGINVGQFEEHWLKYQVIDTPGLLD 226 Query: 219 NAHQGAGIGDR----FLKHTERTHVLLHIVS-------ALEENVQAAYQCILDELSAYNS 267 +R LKH + V+++I LEE + ++ I +E + Sbjct: 227 RPLSERNEIERQAILALKHLGK--VIIYIFDPSEYCGFPLEEQMH-LFEEIYEEFKEFPF 283 Query: 268 ELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI----PQILECLH 323 IV L+++D D + + RK E G P + G G+ +ILE L Sbjct: 284 -------IVVLNKVDVADEEKI-RKAEEFLRAKGIEPIRIVAKEGLGVDEVKKKILEILK 335 Query: 324 DKI 326 ++ Sbjct: 336 PEL 338 >gi|284165701|ref|YP_003403980.1| small GTP-binding protein [Haloterrigena turkmenica DSM 5511] gi|284015356|gb|ADB61307.1| small GTP-binding protein [Haloterrigena turkmenica DSM 5511] Length = 369 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 49/89 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKS+ L S+T A+ + Y FTTL N G+++ + D+PG+I+ Sbjct: 61 ATVALVGFPSVGKSSLLNSMTNAESETGSYEFTTLDVNPGMLQHRGANIQMLDVPGLIEG 120 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + L +++ ++S E Sbjct: 121 AASGRGDGQQVLAVVRNADLIVFMLSVFE 149 >gi|241956964|ref|XP_002421202.1| GTP-binding protein/GTPase, putative [Candida dubliniensis CD36] gi|223644545|emb|CAX41363.1| GTP-binding protein/GTPase, putative [Candida dubliniensis CD36] Length = 396 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 18/101 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------KE 203 +G++GL N GKSTF ++T++ A+YPF T+ P IV K Sbjct: 33 VGLVGLANVGKSTFFQALTKSTLGNPANYPFATIEPEKSIVLVPSEKLTHYAKLYQSQKT 92 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + DI G+++NA GAG+G++FL + +L IV Sbjct: 93 VPTNLTIWDIAGLVRNASSGAGLGNKFLNDIRQVDGILQIV 133 >gi|227115179|ref|ZP_03828835.1| putative GTPase HflX [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 426 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 23/178 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST ++T A AD F TL P L ++ + + +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNTITSAGVYAADQLFATLDPTLRRIQVDDVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCI----LDELSAYNSE 268 + H L+ T + +LLH+V A L+EN++A + DE+ A Sbjct: 257 RQLPHDLVAAFKATLQETRQASLLLHVVDAADPRLDENIEAVDDVLAEIEADEIPA---- 312 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D +NE + V S+ TG GIP + + L +++ Sbjct: 313 ------LLVMNKIDMLDDFVPRIDRNE---ENLPVRVWLSAQTGDGIPLLFQALTERL 361 >gi|124506405|ref|XP_001351800.1| cytosolic preribosomal GTP-binding protein, putative [Plasmodium falciparum 3D7] gi|23504826|emb|CAD51607.1| cytosolic preribosomal GTP-binding protein, putative [Plasmodium falciparum 3D7] Length = 365 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 4/114 (3%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG++G P+ GKST L +T ++A Y FTTL GI K + L D+PGII+ Sbjct: 63 ARIGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCVPGIFKYKGAKMQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-ELSAYNSELRKK 272 A G G G + + + ++L ++ L+ Y+ I++ EL + L KK Sbjct: 123 AKDGKGRGKQVIAVAKSCSLILIVLDVLKP---LTYKKIIEKELEGFGIRLNKK 173 >gi|224054118|ref|XP_002298101.1| predicted protein [Populus trichocarpa] gi|222845359|gb|EEE82906.1| predicted protein [Populus trichocarpa] Length = 399 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 2/111 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L +T + A Y FTTL GI+ + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIEGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 +G G G + + ++ + ++L ++ A + Q + EL + L KK Sbjct: 125 EGKGRGRQVIAVSKSSDIVLMVLDA--SKSEGHRQILTKELESVGLRLNKK 173 >gi|188535084|ref|YP_001908881.1| putative GTPase HflX [Erwinia tasmaniensis Et1/99] gi|188030126|emb|CAO98012.1| GTP-binding protein HflX [Erwinia tasmaniensis Et1/99] Length = 426 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 19/176 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L V E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRLTSAEVYAADQLFATLDPTLRRVDVADVGEVVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T +LLHIV A +EEN+ A +L+E+ + Sbjct: 257 RHLPHDLVAAFKATLQETREAALLLHIVDAADLRIEENIDAV-NVVLEEIESDEIP---- 311 Query: 273 IEIVGLSQIDTVD--SDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D + R + L + S+ TG GIP + + L +++ Sbjct: 312 -SLLVMNKIDMLDGFVPRIDRDEENLPVRVW-----LSAQTGEGIPLLFQALTERL 361 >gi|173396|gb|AAA35308.1| GTP-binding protein [Schizosaccharomyces pombe] Length = 364 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/66 (42%), Positives = 40/66 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + IG P+ GKST L+++T+ K A Y FTTL G+++ E + D+PGII+ Sbjct: 63 ARVAFIGFPSVGKSTLLSAITKTKSATASYEFTTLTAIPGVLEYDGAEIQMLDLPGIIEG 122 Query: 220 AHQGAG 225 A QG G Sbjct: 123 ASQGRG 128 >gi|322826891|gb|EFZ31291.1| GTP-binding protein, putative [Trypanosoma cruzi] Length = 394 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +GI+GLPN GKSTF +++ + PF T+ PN + I + +++ + Sbjct: 27 VGIVGLPNVGKSTFFNVLSKKGVPAENRPFCTIDPNTADINIPDDRFEKLVKINKPASIV 86 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+++ A G G+G+ FL H ++H++ EE Sbjct: 87 PAQIHIRDIAGLVRGASNGEGLGNAFLSHINECDGIVHMIRVFEE 131 >gi|255729026|ref|XP_002549438.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240132507|gb|EER32064.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 412 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 18/101 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------KE 203 +G++GL N GKSTF ++T++K A+YPF T+ P +V K Sbjct: 40 VGLVGLANVGKSTFFQALTKSKLGNPANYPFATIEPEKSMVLVPSNKLVHYAKIYGSQKM 99 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + DI G+++NA GAG+G++FL + +L +V Sbjct: 100 VPTNLTIWDIAGLVRNASSGAGLGNKFLNDIRQVDGILQVV 140 >gi|53803934|ref|YP_114414.1| GTP-binding protein [Methylococcus capsulatus str. Bath] gi|53757695|gb|AAU91986.1| GTP-binding protein [Methylococcus capsulatus str. Bath] Length = 433 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 12/125 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 +G++G NAGKST ++TRA AD F TL P L + G + +LAD G I++ Sbjct: 199 VGLVGYTNAGKSTLFNALTRADVYAADQLFATLDPTLRRLSAGGLDMVLADTVGFIRHLP 258 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H+ L+ + +LLH+V A +E +DE A E+R+ + +G + Sbjct: 259 HELVAAFRSTLQESAEADLLLHVVDATDER--------MDETIA---EVRQVLAEIGADR 307 Query: 281 IDTVD 285 I V+ Sbjct: 308 IPCVE 312 >gi|251788133|ref|YP_003002854.1| putative GTPase HflX [Dickeya zeae Ech1591] gi|247536754|gb|ACT05375.1| GTP-binding proten HflX [Dickeya zeae Ech1591] Length = 433 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST +T A AD F TL P L + + + +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRMTSADVYAADQLFATLDPTLRRIDVDDVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T +LLH+V A ++EN+ A + +L E+ A + Sbjct: 257 RDLPHDLVAAFKATLQETREATLLLHVVDASDTRVDENIDAVNE-VLTEIEADDIPF--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +++ T ++E + V S+ TG GIP +L+ L +++ Sbjct: 313 --LLVMNKIDQLENITPRIDRDE---ENRPVRVWLSAQTGEGIPLLLQALTERL 361 >gi|242237988|ref|YP_002986169.1| GTPase HflX [Dickeya dadantii Ech703] gi|242130045|gb|ACS84347.1| GTP-binding proten HflX [Dickeya dadantii Ech703] Length = 426 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 11/172 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST ++T A AD F TL P L ++ E + +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNNMTAAGVYAADQLFATLDPTLRRIEVEDVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + H L+ T +LLHIV A + Q + D L+ ++ K ++ Sbjct: 257 RQLPHDLVAAFKATLQETREATLLLHIVDAADSRASDNIQAVNDVLAEIEAD--KIPVLL 314 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQILECLHDKI 326 +++ID +D +NE +P S+ TG GIP + + L +++ Sbjct: 315 IMNKIDMLDQFEPRIDRNE-----DNLPIRVWLSAQTGEGIPLLFQALCERL 361 >gi|4761138|gb|AAD29269.1|AF107096_1 putative GTP-binding protein [Rhodobacter sphaeroides] Length = 369 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 +GI+GLPN G+ ++TR A + A++PF T+ PN+G V G K+ Sbjct: 9 MGIVGLPNVGQIHVFNALTRTAAAQAANFPFCTIEPNVGEVAVPDARLEILAEIAGSKQI 68 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 I DI G+++ A +G G+G++FL + + H++ E+ Sbjct: 69 IPTRMTFVDIAGLVRGASKGEGLGNQFLANIRECDAIAHVLRCFED 114 >gi|55378623|ref|YP_136473.1| translation-associated GTPase [Haloarcula marismortui ATCC 43049] gi|55231348|gb|AAV46767.1| GTP-binding protein [Haloarcula marismortui ATCC 43049] Length = 395 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL----------------------YPNLG 199 IG++G P+ GKSTF + T YPFTT+ PN G Sbjct: 5 IGLVGKPSVGKSTFFNAATMNDVPEGAYPFTTIDPSMGEAYVRVDCAAPEFDHTCTPNHG 64 Query: 200 IVKEGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS 245 EG + F+ L D+ G++ AH+G G+G++FL VL+H+V Sbjct: 65 YCTEGVR-FVPTKLVDVAGLVPGAHEGKGLGNQFLTDLNEADVLVHVVD 112 >gi|281211729|gb|EFA85891.1| GTP-binding protein [Polysphondylium pallidum PN500] Length = 393 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL---GIVKEGYKEFI--------- 209 +G++G+PN GKS+ +T ++PF T+ PN+ + E Y Sbjct: 24 MGVVGMPNVGKSSLFNILTNMSIPAENFPFCTIDPNVSRCAVPDERYDWLCSVHKPASMK 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A GAG+G+ FL H + + H++ A E + Sbjct: 84 PAYLSITDIAGLVKGASTGAGLGNAFLSHIQAVDGIFHMIRAFEND 129 >gi|156402542|ref|XP_001639649.1| predicted protein [Nematostella vectensis] gi|156226779|gb|EDO47586.1| predicted protein [Nematostella vectensis] Length = 365 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 49/93 (52%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L +T+ + A Y FTTL G++ L D+PGII+ Sbjct: 64 ARVALIGFPSVGKSTLLTKLTQTQSACASYEFTTLTCIPGVINYNGANIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ A + +Q Sbjct: 124 AAQGKGRGRQVIAVARTADLVLMMLDASKGEIQ 156 >gi|148643224|ref|YP_001273737.1| translation-associated GTPase [Methanobrevibacter smithii ATCC 35061] gi|222445455|ref|ZP_03607970.1| hypothetical protein METSMIALI_01094 [Methanobrevibacter smithii DSM 2375] gi|261349984|ref|ZP_05975401.1| GTP-binding protein [Methanobrevibacter smithii DSM 2374] gi|148552241|gb|ABQ87369.1| predicted GTPase, HSR1-related family [Methanobrevibacter smithii ATCC 35061] gi|222435020|gb|EEE42185.1| hypothetical protein METSMIALI_01094 [Methanobrevibacter smithii DSM 2375] gi|288860768|gb|EFC93066.1| GTP-binding protein [Methanobrevibacter smithii DSM 2374] Length = 396 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL----------------------YPNLG 199 I + G PN GKS+F S T + ++A+YPFTT+ P Sbjct: 4 IAVTGKPNVGKSSFFNSATSSSVEMANYPFTTIDANKAVAHVISECPCKELNVTCNPRNS 63 Query: 200 IVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 I +G + L D+ G++ AH+G G+G++FL + VL+H++ A Sbjct: 64 ICIDGKRLLPVELIDVAGLVPGAHEGKGLGNQFLDDLMQAKVLIHVIDA 112 >gi|300721489|ref|YP_003710764.1| putative GTPase [Xenorhabdus nematophila ATCC 19061] gi|297627981|emb|CBJ88530.1| putative GTPase subunit of protease with nucleoside triP hydrolase domain, together with HflC-HflK involved in stability of phage lambda cII repressor [Xenorhabdus nematophila ATCC 19061] Length = 426 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKS+ S+T AK AD F TL P L + + +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSSLFNSITSAKVYAADQLFATLDPTLRRIDVDDVGTVVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH+V A L+EN+ A +L+E+ E + Sbjct: 257 RHLPHDLVAAFKATLQETRQAKLLLHVVDAADHRLDENI-IAVDSVLEEI-----ESNEI 310 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID ++ T ++E + V S+ TG GI +L+ L +++ Sbjct: 311 PSLMVMNKIDMLEDFTPRIDRDE---ENRPVRVWLSAQTGEGISLLLQALTERL 361 >gi|167391739|ref|XP_001739910.1| developmentally-regulated GTP-binding protein [Entamoeba dispar SAW760] gi|165896201|gb|EDR23680.1| developmentally-regulated GTP-binding protein, putative [Entamoeba dispar SAW760] Length = 365 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 48/85 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G++G P+ GKST L ++T + KIA Y FTTL G++ + L D+PGII+ Sbjct: 61 ARVGMVGFPSVGKSTLLTAMTPTESKIAAYEFTTLTCVPGVMDLKGSQVQLLDLPGIIEG 120 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + +L ++ Sbjct: 121 AKDGKGRGKQVISVARTSDCILLMI 145 >gi|19115315|ref|NP_594403.1| GTP binding protein (predicted) [Schizosaccharomyces pombe 972h-] gi|74626624|sp|O13998|YEI3_SCHPO RecName: Full=Uncharacterized GTP-binding protein C27E2.03c gi|2388943|emb|CAB11677.1| GTP binding protein (predicted) [Schizosaccharomyces pombe] Length = 392 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 33/160 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTLYPNLGIVK----------EGYKE-- 207 GI+G+PN GKSTF ++T++ P A+YP+ T+ P V E YK Sbjct: 24 GIVGMPNVGKSTFFRAITKSVLGNP--ANYPYATIDPEEAKVAVPDERFDWLCEAYKPKS 81 Query: 208 -----FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQ 252 + DI G+ K A G G+G+ FL H + +V A ++ + Sbjct: 82 RVPAFLTVFDIAGLTKGASTGVGLGNAFLSHVRAVDAIYQVVRAFDDAEIIHVEGDVDPI 141 Query: 253 AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 I+DEL ++E +K + GL +I + ++TL K Sbjct: 142 RDLSIIVDELLIKDAEFVEK-HLEGLRKITSRGANTLEMK 180 >gi|156848326|ref|XP_001647045.1| hypothetical protein Kpol_1050p44 [Vanderwaltozyma polyspora DSM 70294] gi|156117728|gb|EDO19187.1| hypothetical protein Kpol_1050p44 [Vanderwaltozyma polyspora DSM 70294] Length = 412 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IGI+G P++GKST L S+T A + +PFTT+ PN Sbjct: 7 IGIVGKPSSGKSTTLNSLTDAVAAVGAFPFTTIEPNRATGYLQVDCACSRVGKQDLCKPN 66 Query: 198 LGIVKEGYKEF--ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G G + +L D+ G++ AH G G+G++FL L+H+V Sbjct: 67 YGWCTNGKRHIPIMLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVV 115 >gi|73544489|ref|XP_848139.1| GTP binding protein [Leishmania major strain Friedlin] gi|321438492|emb|CBZ12251.1| putative GTP binding protein [Leishmania major strain Friedlin] Length = 371 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 22/124 (17%) Query: 145 ILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPN------ 197 +L + ++W + GI+GLPN GKST ++T ++ K ++PF T+ N Sbjct: 1 MLRRSVVLWRRRA----AGIVGLPNVGKSTLFNALTCSQIAKTGNFPFCTIDANTSKVPV 56 Query: 198 -------LGIVKEGYK----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 L + K E L D+ G+I A +GAG+G++FL VLLH V Sbjct: 57 VDPRLRQLAQFTQAEKVVDVEVDLTDVAGLIAGASKGAGLGNKFLADIRNCAVLLHTVRC 116 Query: 247 LEEN 250 E + Sbjct: 117 FESS 120 >gi|68487409|ref|XP_712403.1| hypothetical protein CaO19.2128 [Candida albicans SC5314] gi|68487699|ref|XP_712260.1| hypothetical protein CaO19.9675 [Candida albicans SC5314] gi|46433634|gb|EAK93067.1| hypothetical protein CaO19.9675 [Candida albicans SC5314] gi|46433788|gb|EAK93217.1| hypothetical protein CaO19.2128 [Candida albicans SC5314] Length = 403 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 18/101 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------KE 203 +G++GL N GKSTF ++T++ A+YPF T+ P IV K Sbjct: 40 VGLVGLANVGKSTFFQALTKSTLGNPANYPFATIEPEKSIVLVPSDKLTHYAKLYSSQKT 99 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + DI G+++NA GAG+G++FL + +L IV Sbjct: 100 VPTNLTIWDIAGLVRNASSGAGLGNKFLNDIRQVDGILQIV 140 >gi|67470854|ref|XP_651389.1| GTP-binding protein [Entamoeba histolytica HM-1:IMSS] gi|56468118|gb|EAL46003.1| GTP-binding protein, putative [Entamoeba histolytica HM-1:IMSS] Length = 365 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 48/85 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G++G P+ GKST L ++T + KIA Y FTTL G++ + L D+PGII+ Sbjct: 61 ARVGMVGFPSVGKSTLLTAMTPTESKIAAYEFTTLTCVPGVMDLKGSQVQLLDLPGIIEG 120 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + +L ++ Sbjct: 121 AKDGKGRGRQVISVARTSDCILLMI 145 >gi|71032329|ref|XP_765806.1| hypothetical protein [Theileria parva strain Muguga] gi|68352763|gb|EAN33523.1| developmentally regulated GTP-binding protein 1, putative [Theileria parva] Length = 366 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 1/85 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G++G P+ GKST L +T ++ADY FTTL G++K + L D+PGII+ Sbjct: 64 ARVGLVGFPSVGKSTLLNKLTGTFSEVADYEFTTLTCVPGVIKYKGSKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT L+ +V Sbjct: 124 AKDGKGRGKQVIA-VARTCTLILVV 147 >gi|329890243|ref|ZP_08268586.1| GTP-dependent nucleic acid-binding protein engD [Brevundimonas diminuta ATCC 11568] gi|328845544|gb|EGF95108.1| GTP-dependent nucleic acid-binding protein engD [Brevundimonas diminuta ATCC 11568] Length = 365 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 18/90 (20%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 + I+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE Sbjct: 5 VAIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGDVAVPEPRLNVLAGIAGSKEI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKH 233 I DI G+++ A +G G+G++FL + Sbjct: 65 IPSRITFVDIAGLVRGASKGEGLGNQFLAN 94 >gi|238882941|gb|EEQ46579.1| conserved hypothetical protein [Candida albicans WO-1] Length = 396 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 18/101 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------KE 203 +G++GL N GKSTF ++T++ A+YPF T+ P IV K Sbjct: 33 VGLVGLANVGKSTFFQALTKSTLGNPANYPFATIEPEKSIVLVPSDKLTHYAKLYSSQKT 92 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + DI G+++NA GAG+G++FL + +L IV Sbjct: 93 VPTNLTIWDIAGLVRNASSGAGLGNKFLNDIRQVDGILQIV 133 >gi|255560657|ref|XP_002521342.1| developmentally regulated GTP-binding protein, putative [Ricinus communis] gi|223539420|gb|EEF41010.1| developmentally regulated GTP-binding protein, putative [Ricinus communis] Length = 396 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 2/111 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L +T + A Y FTTL GI+ + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIEGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 +G G G + + ++ + ++L ++ A + Q + EL A L K+ Sbjct: 125 EGKGRGRQVIAVSKSSDIVLMVLDA--SKSEGHRQILTRELEAVGLRLNKR 173 >gi|50312171|ref|XP_456117.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49645253|emb|CAG98825.1| KLLA0F23287p [Kluyveromyces lactis] Length = 369 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G +G P+ GKST L+ +T + + A+Y FTTL G++K + + D+PGII Sbjct: 65 VASVGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTLVTVPGVIKYKGAKIQMLDLPGIID 124 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT LL IV Sbjct: 125 GAKDGRGRGKQVIA-VARTCNLLFIV 149 >gi|167530586|ref|XP_001748154.1| hypothetical protein [Monosiga brevicollis MX1] gi|163773274|gb|EDQ86915.1| predicted protein [Monosiga brevicollis MX1] Length = 394 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 21/140 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 +GI+GLPN GKST +T ++ ++PF T PN V + F Sbjct: 26 VGIVGLPNVGKSTTFNVLTHSEAPAENFPFCTKDPNEARVPVPDERFDWLCDFHKPPSKV 85 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 + DI G++K AH+G G+G+ FL + + H+ A + + +D + Sbjct: 86 PAFLNVVDIAGLVKGAHEGLGLGNAFLSNIAACDAIFHVCRAFSDEDIVHVEGDVDPVRD 145 Query: 262 LSAYNSELRKKIEIVGLSQI 281 L ++ELR K +I L ++ Sbjct: 146 LDIISNELRLK-DIAALEKV 164 >gi|84999454|ref|XP_954448.1| GTP-binding protein [Theileria annulata] gi|65305446|emb|CAI73771.1| GTP-binding protein, putative [Theileria annulata] Length = 366 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 1/85 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G++G P+ GKST L +T ++ADY FTTL G++K + L D+PGII+ Sbjct: 64 ARVGLVGFPSVGKSTLLNKLTGTFSEVADYEFTTLTCVPGVIKYKGSKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT L+ +V Sbjct: 124 AKDGKGRGKQVIA-VARTCTLILVV 147 >gi|302383780|ref|YP_003819603.1| GTP-binding protein YchF [Brevundimonas subvibrioides ATCC 15264] gi|302194408|gb|ADL01980.1| GTP-binding protein YchF [Brevundimonas subvibrioides ATCC 15264] Length = 364 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 18/90 (20%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 + I+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE Sbjct: 5 VAIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGDVAVPEPRLDVLAEIAGSKEI 64 Query: 209 I-----LADIPGIIKNAHQGAGIGDRFLKH 233 I DI G+++ A +G G+G++FL + Sbjct: 65 IPSRITFVDIAGLVRGASKGEGLGNQFLAN 94 >gi|308806425|ref|XP_003080524.1| developmentally regulated GTP binding protein (ISS) [Ostreococcus tauri] gi|116058984|emb|CAL54691.1| developmentally regulated GTP binding protein (ISS) [Ostreococcus tauri] Length = 268 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 4/115 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L+ +T + + A Y FTTL G++ + L D+PGII+ A Sbjct: 142 VALIGFPSVGKSTLLSQLTGTESEAAAYEFTTLTCIPGVIHYNDAKIQLLDLPGIIEGAS 201 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEE---NVQAAYQCILD-ELSAYNSELRKK 272 +G G G + + + + ++L ++ A + N + A++ IL EL A L +K Sbjct: 202 EGKGRGRQVIAVAKSSDLILMVLDACKSEAANSRYAHKDILTRELEAVGLRLNQK 256 >gi|90075926|dbj|BAE87643.1| unnamed protein product [Macaca fascicularis] Length = 364 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 13/119 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS FL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSIFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A QG G G + + V++ ++ A + VQ S L K++E VG+ Sbjct: 123 AAQGKGRGRQVIAVARTADVVIMMLDATKGEVQ-------------RSLLEKELESVGI 168 >gi|312173797|emb|CBX82051.1| GTP-binding protein hflX [Erwinia amylovora ATCC BAA-2158] Length = 426 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L V E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRLTSAEVYAADQLFATLDPTLRRVDVADVGEVVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T +LLHIV A +EEN+ A +L E+ + + Sbjct: 257 RHLPHDLVAAFKATLQETREAALLLHIVDAADLRIEENIDAV-NVVLKEIESDDIP---- 311 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++E + V S+ TG GIP + + L +++ Sbjct: 312 -SLLVMNKIDMLDGFVPRIDRDE---ENLPVRVWLSAQTGEGIPLLFQALTERL 361 >gi|116753586|ref|YP_842704.1| nucleolar GTP-binding 1 [Methanosaeta thermophila PT] gi|116665037|gb|ABK14064.1| Nucleolar GTP-binding 1 [Methanosaeta thermophila PT] Length = 306 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 22/169 (13%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + I I G PN GKS+FLA VTRA+P+IA YPFTT +G + K + + D PG++ Sbjct: 146 LPTIIIAGYPNVGKSSFLAMVTRARPEIASYPFTTQGLIVGHITMKDKRYQILDTPGLL- 204 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS----AYNSELRKKIE 274 DR L +ER + ++A+ +++ ++D +++ R E Sbjct: 205 ---------DRPL--SERNEIERQAIAAM-RHLRGVVLFLIDPTGHCGYPLDAQHRLLEE 252 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE-CL 322 I ++ V +A K+++ + + S++TG G+ + LE CL Sbjct: 253 IKSWLELPVV----VAYNKSDIPSDHPRDGIRISTLTGDGVQETLEICL 297 >gi|167523461|ref|XP_001746067.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775338|gb|EDQ88962.1| predicted protein [Monosiga brevicollis MX1] Length = 1418 Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 30/115 (26%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-----PKIADYPFTTLYPNLG-----------IVK--- 202 IG++G P+AGKST ++T K ++A +PFTT+ PN+G ++ Sbjct: 934 IGLVGKPSAGKSTLFNAITDPKTADATARVAAFPFTTIDPNIGQGYYCASCPSAVLSCES 993 Query: 203 -------EGYKE----FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G+K+ I+ D+ G++ A+QG G G+ FL VL+H++ A Sbjct: 994 EPAHGWGAGHKQRKIPIIIKDVAGLVPGAYQGRGKGNAFLNDLCDADVLIHVIDA 1048 >gi|297839127|ref|XP_002887445.1| hypothetical protein ARALYDRAFT_476401 [Arabidopsis lyrata subsp. lyrata] gi|297333286|gb|EFH63704.1| hypothetical protein ARALYDRAFT_476401 [Arabidopsis lyrata subsp. lyrata] Length = 399 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 2/111 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L +T + A Y FTTL G++ + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYNDTKIQLLDLPGIIEGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 +G G G + + + + ++L ++ A Q Q + EL A L K+ Sbjct: 125 EGKGRGRQVIAVAKSSDLVLMVLDA--SKSQGHRQILTKELEAVGLRLNKR 173 >gi|84489216|ref|YP_447448.1| GTPase [Methanosphaera stadtmanae DSM 3091] gi|84372535|gb|ABC56805.1| predicted GTPase [Methanosphaera stadtmanae DSM 3091] Length = 346 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 26/56 (46%), Positives = 38/56 (67%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + I G PN GKST L ++T A PK+A+YPFTT +G + GYK++ + D PG++ Sbjct: 165 VVIAGFPNVGKSTLLNNITDASPKVANYPFTTQGLQIGNYELGYKKYQIIDTPGLL 220 >gi|303289443|ref|XP_003064009.1| predicted protein [Micromonas pusilla CCMP1545] gi|226454325|gb|EEH51631.1| predicted protein [Micromonas pusilla CCMP1545] Length = 400 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +G++G+PN GKST +++ ++PF T+ PN + + E + + Sbjct: 26 VGLVGMPNVGKSTLYNALSNCSIPAENFPFCTIDPNSTRVHVPDERFDWLVDHHKPKSVV 85 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G++K A GAG+G+ FL H + +LH++ A ++ Sbjct: 86 QPFLEIVDIAGLVKGASTGAGLGNAFLSHIKAVDGILHVMRAFDD 130 >gi|76801911|ref|YP_326919.1| translation-associated GTPase [Natronomonas pharaonis DSM 2160] gi|76557776|emb|CAI49360.1| probable GTP-binding protein [Natronomonas pharaonis DSM 2160] Length = 395 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 24/108 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-----------------IVKEG 204 IG++G P+ GKSTF + T YPFTT+ P++G G Sbjct: 5 IGLVGKPSVGKSTFFNAATMNDVPEGAYPFTTIDPSMGEAYVRVECAAPEFDHSCTPNHG 64 Query: 205 Y----KEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS 245 Y F+ L D+ G++ AH+G G+G++FL VL+H+V Sbjct: 65 YCADGMRFVPTKLVDVAGLVPGAHEGKGLGNQFLTDLNEADVLIHVVD 112 >gi|68070105|ref|XP_676964.1| GTP-binding protein [Plasmodium berghei strain ANKA] gi|56496892|emb|CAH94563.1| conserved GTP-binding protein, putative [Plasmodium berghei] Length = 393 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 17/104 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +G++GLPN GKST +T+ +YPF T+ P+ + + E + + Sbjct: 24 MGLVGLPNVGKSTTFNVLTKLNIPAENYPFCTIDPHEAKVTVEDERFDWLVDHFKPKSSV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++KNAH G G+G+ FL + + H+V A E Sbjct: 84 HAYLSIFDIAGLVKNAHLGEGLGNNFLSNIAAVDGIYHVVRAFE 127 >gi|145534714|ref|XP_001453101.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|74831277|emb|CAI39275.1| rab_C82 [Paramecium tetraurelia] gi|124420801|emb|CAK85704.1| unnamed protein product [Paramecium tetraurelia] Length = 398 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 51/87 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T+ + +A Y FTTL G++ + L D+PGII+ Sbjct: 62 ARVCMIGFPSVGKSTILSTLTKTQSLVAAYEFTTLTCIPGVIDYKDAKIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 A +G G G + + + ++L ++ A Sbjct: 122 ASEGRGRGRQVIAVAKACDLVLMVLEA 148 >gi|253690081|ref|YP_003019271.1| GTP-binding proten HflX [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756659|gb|ACT14735.1| GTP-binding proten HflX [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 426 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 23/178 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST +T A AD F TL P L ++ + + +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNKITSAGVYAADQLFATLDPTLRRIEVDDVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCI----LDELSAYNSE 268 + H L+ T + +LLH+V A L+EN++A + DE+ A Sbjct: 257 RQLPHDLVAAFKATLQETRQASLLLHVVDAADPRLDENIEAVNDVLAEIEADEIPA---- 312 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D +NE + V S+ TG GIP + + L +++ Sbjct: 313 ------LLVMNKIDMLDDFVPRIDRNE---ENLPVRVWLSAQTGDGIPLLFQALTERL 361 >gi|115463395|ref|NP_001055297.1| Os05g0357600 [Oryza sativa Japonica Group] gi|55167981|gb|AAV43849.1| putative GTP binding protein [Oryza sativa Japonica Group] gi|113578848|dbj|BAF17211.1| Os05g0357600 [Oryza sativa Japonica Group] gi|215740529|dbj|BAG97185.1| unnamed protein product [Oryza sativa Japonica Group] gi|215767068|dbj|BAG99296.1| unnamed protein product [Oryza sativa Japonica Group] gi|218196625|gb|EEC79052.1| hypothetical protein OsI_19615 [Oryza sativa Indica Group] gi|222631265|gb|EEE63397.1| hypothetical protein OsJ_18209 [Oryza sativa Japonica Group] Length = 399 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 2/111 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L +T + A Y FTTL GI++ + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIQYNDTKIQLLDLPGIIEGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 +G G G + + + + ++L ++ A + Q + EL A L K+ Sbjct: 125 EGKGRGRQVIAVAKSSDLVLMVLDA--SKSEGHRQILTRELEAVGLRLNKR 173 >gi|303244910|ref|ZP_07331236.1| GTPase of unknown function domain protein [Methanothermococcus okinawensis IH1] gi|302484727|gb|EFL47665.1| GTPase of unknown function domain protein [Methanothermococcus okinawensis IH1] Length = 393 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 24/112 (21%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------VKE------- 203 +A +G++G PN GKST ++T I +YPFTT+ PN+G KE Sbjct: 1 MAILGLVGKPNVGKSTLFNAMTEKVADIGNYPFTTINPNIGTSFVTSPCPCKELGVQCNP 60 Query: 204 ---------GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 Y + D+ G++ AH+G G+G++FL + + +V A Sbjct: 61 NNSKCINGIRYIPVEIIDVAGLVPEAHKGKGMGNKFLDDLRQADAFIVVVDA 112 >gi|322493000|emb|CBZ28285.1| putative GTP binding protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 372 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPN-------------LGIVKEGYK-- 206 GI+GLPN GKST ++T ++ K ++PF T+ N L + K Sbjct: 15 GIVGLPNVGKSTLFNALTCSQIAKTGNFPFCTIDANTSKVPVVDPRLRQLAQFTQAEKIV 74 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 E L D+ G+I A +GAG+G++FL VLLH V E + Sbjct: 75 DVEVDLTDVAGLIAGASKGAGLGNKFLADIRNCAVLLHTVRCFESS 120 >gi|84043784|ref|XP_951682.1| GTP binding protein [Trypanosoma brucei TREU927] gi|33348639|gb|AAQ15964.1| GTP binding protein, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] gi|62359712|gb|AAX80143.1| GTP binding protein, putative [Trypanosoma brucei] Length = 394 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +GI+GLPN GKSTF +++ + PF T+ PN + I + + + + Sbjct: 27 VGIVGLPNVGKSTFFNVLSKKGVPAENRPFCTIDPNTADINIPDDRFDKLVQLNKPASVV 86 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+++ A G G+G+ FL H ++H++ EE Sbjct: 87 PAQVHIRDIAGLVRGASHGEGLGNAFLSHINECDGVIHMIRVFEE 131 >gi|145529075|ref|XP_001450326.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|74831283|emb|CAI39276.1| drg_A82 [Paramecium tetraurelia] gi|124417937|emb|CAK82929.1| unnamed protein product [Paramecium tetraurelia] Length = 398 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 51/87 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T+ + +A Y FTTL G++ + L D+PGII+ Sbjct: 62 ARVCMIGFPSVGKSTILSTLTKTQSLVAAYEFTTLTCIPGVIDYKDAKIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 A +G G G + + + ++L ++ A Sbjct: 122 ASEGRGRGRQVIAVAKACDLVLMVLEA 148 >gi|146091024|ref|XP_001466422.1| GTP binding protein [Leishmania infantum JPCM5] gi|134070784|emb|CAM69141.1| putative GTP binding protein [Leishmania infantum JPCM5] Length = 372 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 GI+GLPN GKST ++T ++ K ++PF T+ N + IV ++ Sbjct: 15 GIVGLPNVGKSTLFNALTCSQIAKTGNFPFCTIDANTSKVPIVDPRLRQLAQFTQAEKIV 74 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 L D+ G+I A +GAG+G++FL VLLH V E + Sbjct: 75 DVEVDLTDVAGLIAGASKGAGLGNKFLADIRNCAVLLHTVRCFESS 120 >gi|14521033|ref|NP_126508.1| gtp1/obg family GTP-binding protein [Pyrococcus abyssi GE5] gi|5458250|emb|CAB49739.1| GTP-binding protein, putative [Pyrococcus abyssi GE5] Length = 357 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 26/172 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + I G PN GKST L ++T AKP+IA YPFTT N+G ++GY + + D PG++ Sbjct: 170 VVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVGQFEDGYFRYQVIDTPGLL---- 225 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEE--NV-----QAAYQC---ILDELSAYN---SE 268 DR L +ER + + AL+ N+ + C + +++ +N E Sbjct: 226 ------DRPL--SERNEIEKQAILALKYLGNLIIYIFDPSEYCGFPLEEQIHLFNEIYEE 277 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +V +++ID + D + R EL + G + S++ G G+ ++ E Sbjct: 278 FKDMPFLVVINKIDVAEEDKI-RIVEELVKEKGIKFLKISALKGEGVDKVRE 328 >gi|83286382|ref|XP_730137.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23489774|gb|EAA21702.1| GTP-binding protein [Plasmodium yoelii yoelii] Length = 451 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 17/104 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +G++GLPN GKST +T+ +YPF T+ P+ + + E + + Sbjct: 82 MGLVGLPNVGKSTTFNVLTKLNIPAENYPFCTIDPHEAKVTVEDERFDWLVDHFKPKSSV 141 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++KNAH G G+G+ FL + + H+V A E Sbjct: 142 HAYLSIFDIAGLVKNAHLGEGLGNNFLSNIAAVDGIYHVVRAFE 185 >gi|322500252|emb|CBZ35330.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 372 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 GI+GLPN GKST ++T ++ K ++PF T+ N + IV ++ Sbjct: 15 GIVGLPNVGKSTLFNALTCSQIAKTGNFPFCTIDANTSKVPIVDPRLRQLAQFTQAEKIV 74 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 L D+ G+I A +GAG+G++FL VLLH V E + Sbjct: 75 DVEVDLTDVAGLIAGASKGAGLGNKFLADIRNCAVLLHTVRCFESS 120 >gi|254172186|ref|ZP_04878862.1| GTP-binding protein [Thermococcus sp. AM4] gi|214034082|gb|EEB74908.1| GTP-binding protein [Thermococcus sp. AM4] Length = 388 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 1/113 (0%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I + GLPN GKS+ L ++T +ADY FTT+ P G++ + L ++PG+++ Sbjct: 83 AQIVLAGLPNVGKSSLLKALTNVDADVADYAFTTVQPIPGMMHHKDVQIQLVEVPGLVEG 142 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G+G + L R + IV L ++ + +L E ++ K+ Sbjct: 143 AALGKGMGPQLL-SVIRNADAIAIVVDLSQDPVKQMEILLREFERAGIKVNKR 194 >gi|168008866|ref|XP_001757127.1| predicted protein [Physcomitrella patens subsp. patens] gi|162691625|gb|EDQ77986.1| predicted protein [Physcomitrella patens subsp. patens] Length = 368 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 2/121 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +G++G P+ GKST L +T ++A Y FTTL G++K + L D+PGII+ A Sbjct: 67 VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCVPGVIKYRGSKIQLLDLPGIIEGAK 126 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQI 281 G G G + + + +L ++ A++ + I EL + L K+ +G + Sbjct: 127 DGKGRGRQVISTARTCNCILIVLDAIKPITHK--RLIEKELEGFGIRLNKEPPNMGFRRK 184 Query: 282 D 282 D Sbjct: 185 D 185 >gi|66805123|ref|XP_636294.1| hypothetical protein DDB_G0289317 [Dictyostelium discoideum AX4] gi|74996649|sp|Q54HP3|DRG1_DICDI RecName: Full=Developmentally-regulated GTP-binding protein 1 homolog; Short=DRG-1 gi|60464648|gb|EAL62781.1| hypothetical protein DDB_G0289317 [Dictyostelium discoideum AX4] Length = 370 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G+IG P+ GKST L +T ++A Y FTTL G++ + L D+PGII+ Sbjct: 65 ARVGLIGFPSVGKSTLLTKLTGTSSEVASYEFTTLTCIPGVINYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + +++L ++ A++ V + I EL + L K+ Sbjct: 125 AKDGKGRGRQVIAVGRTCNLILIVLDAMKPLVHK--KIIERELDGFGIRLNKQ 175 >gi|326430272|gb|EGD75842.1| obg-like ATPase 1 [Salpingoeca sp. ATCC 50818] Length = 471 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 20/131 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGI+GLPN GKST +T+++ ++PF T PN V + F Sbjct: 106 IGIVGLPNVGKSTTFNVLTKSEAPAENFPFCTKDPNEARVPVPDERFDYLCEHFKPPSKI 165 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 + DI G++K A +G G+G+ FL + + H+V A ++ + + +D + Sbjct: 166 PAFLHVMDIAGLVKGASEGLGLGNAFLSNISACDAIYHVVRAFKDTEISHVEGEVDPVRD 225 Query: 262 LSAYNSELRKK 272 L ++ELR K Sbjct: 226 LDIISNELRMK 236 >gi|71659517|ref|XP_821480.1| developmentally regulated GTP-binding protein [Trypanosoma cruzi strain CL Brener] gi|70886861|gb|EAN99629.1| developmentally regulated GTP-binding protein, putative [Trypanosoma cruzi] Length = 368 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 17/144 (11%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG IG P+ GKST L +T ++A Y FTTL G+V + + D+PGII+ Sbjct: 64 ARIGFIGFPSVGKSTLLTKLTSTHSEVAAYEFTTLTCVPGVVNYRGAKLQMLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-ELSAY---------NSEL 269 A G G G + + RT L+ IV + + +Q ++ I++ EL + N ++ Sbjct: 124 AKDGKGRGRQVIA-VARTCSLILIVLDIAKPLQ--HKLIIERELDGFGIRLNKQPPNIDI 180 Query: 270 RKK----IEIVGLSQIDTVDSDTL 289 RKK I I + +D++T+ Sbjct: 181 RKKDRGGISISSTCPLTQLDNETI 204 >gi|257051216|ref|YP_003129049.1| translation-associated GTPase [Halorhabdus utahensis DSM 12940] gi|256689979|gb|ACV10316.1| GTP-binding conserved hypothetical protein TIGR00650 [Halorhabdus utahensis DSM 12940] Length = 395 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 24/108 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-----------------IVKEG 204 IG++G P+ GKSTF + T YPFTT+ P++G G Sbjct: 5 IGLVGKPSVGKSTFFNAATMNDVPEGAYPFTTIDPSVGEAYVRVDCAAPEFGHSCTPNHG 64 Query: 205 YKE----FI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVS 245 Y + F+ L D+ G++ AH+G G+G++FL VL+H+V Sbjct: 65 YCDDGVRFVPTKLVDVAGLVPGAHEGKGLGNQFLTDLNEADVLVHVVD 112 >gi|226530349|ref|NP_001149923.1| developmentally-regulated GTP-binding protein 2 [Zea mays] gi|195635479|gb|ACG37208.1| developmentally-regulated GTP-binding protein 2 [Zea mays] Length = 399 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 2/111 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L +T + A Y FTTL GIV + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIVHYNDTKIQLLDLPGIIEGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 +G G G + + + + ++L ++ A + Q + EL A L K+ Sbjct: 125 EGKGRGRQVIAVAKSSDLVLMVLDA--SKSEGHRQILTRELEAVGLRLNKR 173 >gi|76800944|ref|YP_325952.1| GTP-binding protein [Natronomonas pharaonis DSM 2160] gi|76556809|emb|CAI48383.1| GTP-binding protein [Natronomonas pharaonis DSM 2160] Length = 327 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 5/96 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ +VT A+ + A YPFTT N+G V++ + + L D PG++ Sbjct: 165 IVVAGYPNVGKSSFVNTVTNARNETAAYPFTTTEINVGHVEDNHVRYQLIDTPGLLDRPS 224 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR ++ L H+ A+ + A+ +C Sbjct: 225 E-----DRNPIESQAVSALTHLADAVLFVLDASGEC 255 >gi|315498169|ref|YP_004086973.1| gtp-binding protein ychf [Asticcacaulis excentricus CB 48] gi|315416181|gb|ADU12822.1| GTP-binding protein YchF [Asticcacaulis excentricus CB 48] Length = 370 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 18/90 (20%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 + I+GLPN GKST ++T+ A + A+YPF T+ PN G V G KE Sbjct: 5 VAIVGLPNVGKSTLFNALTQTASAQAANYPFCTIEPNTGEVAVPEPRLEVLAKIVGSKEI 64 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKH 233 I A DI G+++ A +G G+G++FL + Sbjct: 65 IPARINFVDIAGLVRGASKGEGLGNQFLAN 94 >gi|255071795|ref|XP_002499572.1| predicted protein [Micromonas sp. RCC299] gi|226514834|gb|ACO60830.1| predicted protein [Micromonas sp. RCC299] Length = 403 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 30/142 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +G++GLPN GKS+ +T ++PF T+ PN + E Y +F+ Sbjct: 27 MGVVGLPNVGKSSLFNLLTDQSIAAENFPFCTIEPNEARCAVPDERY-DFLCDMWKPPSE 85 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL--EENVQA-------- 253 + DI G+++ A +GAG+G+ FL H + + H+V A EE + Sbjct: 86 YPAYLHVTDIAGLVRGAAEGAGLGNAFLSHIQAVDGIFHVVRAFDSEEVIHVDDSVDPVR 145 Query: 254 AYQCILDELSAYNSE-LRKKIE 274 + I EL A + E LRK +E Sbjct: 146 DLETIQAELCAKDMEYLRKAVE 167 >gi|242398618|ref|YP_002994042.1| Predicted GTPase, GTP1/OBG family, containing TGS domain [Thermococcus sibiricus MM 739] gi|242265011|gb|ACS89693.1| Predicted GTPase, GTP1/OBG family, containing TGS domain [Thermococcus sibiricus MM 739] Length = 387 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 4/119 (3%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 + + + GLPN GKS+ L + IADYPFTT+ P G++ + L ++PG+I+ Sbjct: 82 SQVVLAGLPNVGKSSLLKVLADVDIDIADYPFTTVEPIPGMMNHKDVQIQLVEVPGLIEG 141 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK---KIEI 275 A G G+G + L R + IV L ++ + IL E ++ K K+EI Sbjct: 142 AALGKGMGTQLL-SVIRNADAIAIVVDLSQDPIKQMKIILKEFERAGIKINKRKPKVEI 199 >gi|90418286|ref|ZP_01226198.1| GTP-binding protein [Aurantimonas manganoxydans SI85-9A1] gi|90337958|gb|EAS51609.1| GTP-binding protein [Aurantimonas manganoxydans SI85-9A1] Length = 367 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLG--------------IVKEGY-- 205 GI+GLPN GKST ++T+ A +YPF T+ PN G I K Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAAAANYPFCTIEPNTGDVPVPDPRLKDIAGIAKSANIL 65 Query: 206 -KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 66 PTRITFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDD 111 >gi|198429223|ref|XP_002126966.1| PREDICTED: similar to GTP binding protein 4 [Ciona intestinalis] Length = 638 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 14/183 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA+ ++ Y FTT +G + Y + + D PGI+ Sbjct: 171 ILISGFPNVGKSSFINKITRAEVEVQPYAFTTKSLFVGHMDYRYLRWQVIDTPGILDQP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + DR L H+ SA+ + + QC + +LS +N+ K Sbjct: 230 ----LEDRNTIEMLSVTALAHLRSAVVYVMDISEQCGESLESQLSLFNNIRPLFNNKPLF 285 Query: 276 VGLSQIDTVDSDTLARKKNEL--ATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIRGE 332 V ++ID + D L+ + ++ + +P F S++TG GI ++ + DK+ R E Sbjct: 286 VMANKIDVMSKDDLSDEHKKIFEDLETEGIPIFWTSTVTGEGIMELRQAACDKLLLHRVE 345 Query: 333 NEF 335 + Sbjct: 346 TKM 348 >gi|242214968|ref|XP_002473303.1| predicted protein [Postia placenta Mad-698-R] gi|220727589|gb|EED81503.1| predicted protein [Postia placenta Mad-698-R] Length = 363 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+ T + A Y FTTL G++ L D+PGI++ Sbjct: 54 ARVALIGFPSVGKSTLLSKCTHTVSETAAYEFTTLTAIPGVIDYQGARIQLLDLPGIVEG 113 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A QG G G + + + ++L ++ A + + Q I EL A L KK Sbjct: 114 ASQGRGRGRQVVSTAKTADLILIMLDATKSDEQRRLLEI--ELDAVGIRLNKK 164 >gi|220922769|ref|YP_002498071.1| GTP-dependent nucleic acid-binding protein EngD [Methylobacterium nodulans ORS 2060] gi|219947376|gb|ACL57768.1| GTP-binding protein YchF [Methylobacterium nodulans ORS 2060] Length = 365 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A A + A+YPF T+ PN+G V G KE I Sbjct: 6 GIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGEVAVPDPRLDDLAGIAGSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+++ A +G G+G++FL + + H+V E+ Sbjct: 66 PTRLTFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVVRCFED 110 >gi|322820435|gb|EFZ27054.1| developmentally regulated GTP-binding protein, putative [Trypanosoma cruzi] Length = 368 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 17/144 (11%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG IG P+ GKST L +T ++A Y FTTL G+V + + D+PGII+ Sbjct: 64 ARIGFIGFPSVGKSTLLTKLTSTHSEVAAYEFTTLTCVPGVVNYRGAKLQMLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-ELSAY---------NSEL 269 A G G G + + RT L+ IV + + +Q ++ I++ EL + N ++ Sbjct: 124 AKDGKGRGRQVIA-VARTCSLILIVLDIAKPLQ--HKLIIERELDGFGIRLNKQPPNIDI 180 Query: 270 RKK----IEIVGLSQIDTVDSDTL 289 RKK I I + +D++T+ Sbjct: 181 RKKDRGGISISSTCPLTQLDNETI 204 >gi|307266920|ref|ZP_07548439.1| GTP1/OBG sub domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306918077|gb|EFN48332.1| GTP1/OBG sub domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 86 Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 37/61 (60%), Positives = 51/61 (83%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D A++YI++GDGG G ISFRREK++ +GGPDGG GG+GGDV A NL+TL+DF+Y+ Sbjct: 2 FIDTARIYIKAGDGGNGIISFRREKYVAYGGPDGGDGGKGGDVIFVADPNLSTLLDFKYK 61 Query: 63 Q 63 + Sbjct: 62 K 62 >gi|332702330|ref|ZP_08422418.1| GTP-binding protein Era-like-protein [Desulfovibrio africanus str. Walvis Bay] gi|332552479|gb|EGJ49523.1| GTP-binding protein Era-like-protein [Desulfovibrio africanus str. Walvis Bay] Length = 307 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 24/179 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PNAGKSTFL V K I + P TT GI + + D PG+ Sbjct: 12 VALMGPPNAGKSTFLNHVLGQKVAIVSPKPQTTRNQISGIWTTERGQVVFLDTPGV---- 67 Query: 221 HQGAGIGDRFL-----KHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 HQ G ++FL + +++V+L + A AAY L++ S+ +S L + ++ Sbjct: 68 HQLRGKMNKFLLQSAWQAVAQSNVVLVFLDA------AAYAGRLEKFSSESSPLTQGLQK 121 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVP--------FEFSSITGHGIPQILECLHDKI 326 GL I V+ + K +L + ++ F S++TG G+P++LE + K+ Sbjct: 122 PGLPLIVAVNKVDKVKNKADLLSLMARIAEVWPGAEIFPISALTGDGVPELLEHVLAKL 180 >gi|18978135|ref|NP_579492.1| gtp1/obg family GTP-binding protein [Pyrococcus furiosus DSM 3638] gi|18893936|gb|AAL81887.1| GTP-binding protein, gtp1/obg family [Pyrococcus furiosus DSM 3638] Length = 387 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 1/113 (0%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++GLPN GKS L ++T + ADYPFTT P ++ + L ++PG+I+ Sbjct: 82 AQIVLVGLPNVGKSELLKALTGVDVESADYPFTTTEPVPAMLNYKDVQIQLVEVPGLIEG 141 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G+G + L R + IV L E+ +L E ++ KK Sbjct: 142 AALGKGMGPQLLAVV-RNADAIAIVVDLSEDPVRQMNILLQEFERAGIKVNKK 193 >gi|332157904|ref|YP_004423183.1| developmentally regulated GTP-binding protein [Pyrococcus sp. NA2] gi|331033367|gb|AEC51179.1| developmentally regulated GTP-binding protein [Pyrococcus sp. NA2] Length = 387 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 1/104 (0%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++GLPN GKS L ++T + ADYPFTT P ++K + L ++PG+++ Sbjct: 82 AQIVLVGLPNVGKSELLRALTGVDVESADYPFTTTEPVPAMMKYKDVQIQLVEVPGLLEG 141 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 A G G+G + L R + IV L E+ + +L E Sbjct: 142 AALGKGMGPQLLAVI-RNADAIAIVVDLSEDPIKQMEILLREFE 184 >gi|146091169|ref|XP_001466463.1| GTP binding protein [Leishmania infantum JPCM5] gi|134070825|emb|CAM69183.1| putative GTP binding protein [Leishmania infantum JPCM5] gi|322500305|emb|CBZ35383.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 392 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +GI+GLPN GKST +++ + PF T+ PN + I + + + + Sbjct: 25 VGIVGLPNVGKSTLFNILSKKGVPAENRPFCTIDPNTADINIPDDRFDKLVRIHKPASIV 84 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+++ A G G+G+ FL H ++H+V EE Sbjct: 85 PAQVHICDIAGLVRGASNGEGLGNNFLSHISSCDGIIHMVRVFEE 129 >gi|303285746|ref|XP_003062163.1| predicted protein [Micromonas pusilla CCMP1545] gi|226456574|gb|EEH53875.1| predicted protein [Micromonas pusilla CCMP1545] Length = 403 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 17/104 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFILA------- 211 +G++GLPN GKS+ +T ++PF T+ PN + E Y A Sbjct: 27 MGVVGLPNVGKSSLFNLLTDQSIAAENFPFCTIEPNEARCAVPDERYDYLCQAWKPPSEY 86 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 DI G+++ A +GAG+G+ FL H + + H+V A + Sbjct: 87 PAYLHVTDIAGLVRGAAEGAGLGNAFLSHVQAVDGVFHVVRAFD 130 >gi|254509317|ref|ZP_05121407.1| GTP-binding protein HflX [Vibrio parahaemolyticus 16] gi|219547746|gb|EED24781.1| GTP-binding protein HflX [Vibrio parahaemolyticus 16] Length = 429 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 17/177 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +T A AD F TL P L ++ ILAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIELSDVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T+ +LLH+V A EN+QA + +L+E+ A Sbjct: 257 RHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAVHD-VLEEIEANEIP---- 311 Query: 273 IEIVGLSQIDTVD-SDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 ++ +++ID +D + + +E Q V S++ G GI + E L +++ S Sbjct: 312 -ALIVMNKIDNLDGQNPRIERDDEGVVQTVWV----SAMEGKGIELLFEALTERLAS 363 >gi|323304799|gb|EGA58558.1| YGR210C-like protein [Saccharomyces cerevisiae FostersB] gi|323333378|gb|EGA74774.1| YGR210C-like protein [Saccharomyces cerevisiae AWRI796] gi|323354871|gb|EGA86704.1| YGR210C-like protein [Saccharomyces cerevisiae VL3] Length = 280 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-----------------IVKEG 204 IGI+G P++GKST L S+T A + +PFTT+ PN + K Sbjct: 7 IGIVGKPSSGKSTTLNSLTDAGAAVGAFPFTTIEPNQATGYLQVECACSRFGKEDLCKPN 66 Query: 205 Y------KEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 Y K I L D+ G++ AH G G+G++FL L+H+V Sbjct: 67 YGWCSKGKRHIPIKLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVV 115 >gi|261823150|ref|YP_003261256.1| GTPase HflX [Pectobacterium wasabiae WPP163] gi|261607163|gb|ACX89649.1| GTP-binding proten HflX [Pectobacterium wasabiae WPP163] Length = 426 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 23/178 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST +T A AD F TL P L ++ + + +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNKITSAGVYAADQLFATLDPTLRRIEVDDVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCI----LDELSAYNSE 268 + H L+ T + +LLH+V A L+EN++A + DE+ A Sbjct: 257 RQLPHDLVAAFKATLQETRQASLLLHVVDAADPRLDENIEAVDDVLAEIEADEIPA---- 312 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D +NE + V S+ TG GIP + + L +++ Sbjct: 313 ------LLVMNKIDMLDDFVPRIDRNE---ENLPVRVWLSAQTGDGIPLLFQALTERL 361 >gi|156843573|ref|XP_001644853.1| hypothetical protein Kpol_1065p9 [Vanderwaltozyma polyspora DSM 70294] gi|156115505|gb|EDO16995.1| hypothetical protein Kpol_1065p9 [Vanderwaltozyma polyspora DSM 70294] Length = 368 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G +G P+ GKST L+ +T + + A+Y FTTL G+++ + + D+PGII Sbjct: 64 VASVGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTLVTVPGVIRYKGAKIQMLDLPGIID 123 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT LL IV Sbjct: 124 GAKDGRGRGKQVIA-VARTCNLLFIV 148 >gi|156092014|ref|XP_001612399.1| developmentally regulated GTP-binding protein 1 [Plasmodium vivax SaI-1] gi|148801201|gb|EDL42606.1| developmentally regulated GTP-binding protein 1, putative [Plasmodium vivax] Length = 410 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 4/114 (3%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG++G P+ GKST L +T ++A Y FTTL GI K + L D+PGII+ Sbjct: 63 ARIGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCVPGIFKYKGAKMQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-ELSAYNSELRKK 272 A G G G + + + ++L ++ L+ ++ I++ EL + L KK Sbjct: 123 AKDGKGRGKQVIAVAKSCSLILIVLDVLKP---LTFKKIIEKELEGFGIRLNKK 173 >gi|269961403|ref|ZP_06175767.1| GTP-binding protein HflX [Vibrio harveyi 1DA3] gi|269833780|gb|EEZ87875.1| GTP-binding protein HflX [Vibrio harveyi 1DA3] Length = 429 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 19/185 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L ++ ILAD G I Sbjct: 197 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIELADVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T+ +LLH+V A EN+QA ++ +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAVHE-VLEEIDAH------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFSIR 330 E+ L ++ +D+ L +K + VP S++ G GI + + L +++ S Sbjct: 309 -EVPTLVVMNKIDN--LEEQKPRIERDEEGVPRTVWVSAMDGLGIDLLFDALTERLASQM 365 Query: 331 GENEF 335 E++ Sbjct: 366 VEHQL 370 >gi|66815061|ref|XP_641633.1| hypothetical protein DDB_G0279451 [Dictyostelium discoideum AX4] gi|74997142|sp|Q54WT4|DRG2_DICDI RecName: Full=Developmentally-regulated GTP-binding protein 2 homolog; Short=DRG-2 gi|60469676|gb|EAL67664.1| hypothetical protein DDB_G0279451 [Dictyostelium discoideum AX4] Length = 364 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 48/93 (51%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L +T K A Y FTTL G+++ L D PGII+ Sbjct: 63 ARVALIGFPSVGKSTILTKLTETKSLAAAYEFTTLTCIPGVIQHKGARIQLLDTPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ A + +Q Sbjct: 123 ASQGRGRGRQVIAVARTADLILMMLDANKGEIQ 155 >gi|257052235|ref|YP_003130068.1| GTP-binding protein HSR1-related [Halorhabdus utahensis DSM 12940] gi|256690998|gb|ACV11335.1| GTP-binding protein HSR1-related [Halorhabdus utahensis DSM 12940] Length = 322 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 5/96 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ SVTRA +IA YPFTT ++G ++ + + L D PG++ Sbjct: 161 IVIAGYPNVGKSSFVNSVTRADNEIAAYPFTTTQIHVGHIERDHIRYQLVDTPGLLDRPP 220 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 +R + L H+ A+ V A+ +C Sbjct: 221 -----AERNAIEAQAVSALEHLADAVLVMVDASGEC 251 >gi|261326601|emb|CBH09562.1| GTP binding protein, putative [Trypanosoma brucei gambiense DAL972] Length = 394 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +GI+GLPN GKSTF +++ + PF T+ PN + I + + + + Sbjct: 27 VGIVGLPNVGKSTFFNVLSKKGVPAENRPFCTIDPNTADINIPDDRFDKVVQLNKPASVV 86 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+++ A G G+G+ FL H ++H++ EE Sbjct: 87 PAQVHIRDIAGLVRGASHGEGLGNAFLSHINECDGVIHMIRVFEE 131 >gi|312136404|ref|YP_004003741.1| small gtp-binding protein [Methanothermus fervidus DSM 2088] gi|311224123|gb|ADP76979.1| small GTP-binding protein [Methanothermus fervidus DSM 2088] Length = 354 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 6/111 (5%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L +T A+ K+ +Y FTTL G+++ + + DIPGIIK Sbjct: 56 ATVVLVGFPSVGKSTLLNKLTNAESKVGNYQFTTLNIVPGMLEYKGAKIQIFDIPGIIKG 115 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR 270 A +G G G L +++ ++ Y I++EL N ++R Sbjct: 116 ASEGKGRGREVLSSVRAADLIVVVMDVF----NLDYDTIINELR--NVDIR 160 >gi|190406780|gb|EDV10047.1| hypothetical protein SCRG_00811 [Saccharomyces cerevisiae RM11-1a] gi|207344976|gb|EDZ71943.1| YGR210Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256271476|gb|EEU06525.1| YGR210C-like protein [Saccharomyces cerevisiae JAY291] gi|259146712|emb|CAY79969.1| EC1118_1G1_5413p [Saccharomyces cerevisiae EC1118] gi|323308962|gb|EGA62193.1| YGR210C-like protein [Saccharomyces cerevisiae FostersO] gi|323348466|gb|EGA82711.1| YGR210C-like protein [Saccharomyces cerevisiae Lalvin QA23] Length = 411 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-----------------IVKEG 204 IGI+G P++GKST L S+T A + +PFTT+ PN + K Sbjct: 7 IGIVGKPSSGKSTTLNSLTDAGAAVGAFPFTTIEPNQATGYLQVECACSRFGKEDLCKPN 66 Query: 205 Y------KEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 Y K I L D+ G++ AH G G+G++FL L+H+V Sbjct: 67 YGWCSKGKRHIPIKLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVV 115 >gi|20093139|ref|NP_619214.1| GTP-binding protein [Methanosarcina acetivorans C2A] gi|19918478|gb|AAM07694.1| GTP-binding protein [Methanosarcina acetivorans C2A] Length = 364 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 15/133 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G P+ GKST L VT AK ++ Y FTTL G+++ D+PG++K A Sbjct: 65 VTLVGFPSVGKSTLLNKVTGAKSEVGAYEFTTLTVVPGVLEHKGATIQFLDVPGLVKGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQI 281 G G G + + +++ ++ + Y+ ++DEL Y + +R + Sbjct: 125 SGRGRGKEVISVIRNSDMVIFLLDVFQPK---HYEVLMDEL--YQAGIR----------V 169 Query: 282 DTVDSDTLARKKN 294 D V D ++K+ Sbjct: 170 DEVPPDVTIKRKD 182 >gi|325001209|ref|ZP_08122321.1| GTPase CgtA [Pseudonocardia sp. P1] Length = 115 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 1/113 (0%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 +F+D ++ +G GG G S REKF GGPDGG+GGRGG + + ++TL+D+ + Sbjct: 3 RFVDRVVLHATAGAGGNGCASVHREKFKPLGGPDGGNGGRGGSIVLVVDPGVHTLLDYHH 62 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQR 114 + H A+ G +G ++GA D L VP GT V +EDG ++ DL G R Sbjct: 63 RPHAAARSGTQGQGAFKNGANSPDTELRVPDGTVVLDEDG-EVVADLVGPGTR 114 >gi|323337495|gb|EGA78743.1| YGR210C-like protein [Saccharomyces cerevisiae Vin13] Length = 411 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-----------------IVKEG 204 IGI+G P++GKST L S+T A + +PFTT+ PN + K Sbjct: 7 IGIVGKPSSGKSTTLNSLTDAGAAVGAFPFTTIEPNQATGYLQVECACSRFGKEDLCKPN 66 Query: 205 Y------KEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 Y K I L D+ G++ AH G G+G++FL L+H+V Sbjct: 67 YGWCSKGKRHIPIKLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVV 115 >gi|145350596|ref|XP_001419688.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579920|gb|ABO97981.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 405 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN--------------LGIVKEG--Y 205 +GI+GLPN GKS+ +T +YPF T+ PN + + K Y Sbjct: 29 MGIVGLPNVGKSSLFNILTEQSIAAENYPFCTIDPNEARCPVPDARYDRLVSMWKPASEY 88 Query: 206 KEFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F+ + DI G+++ A GAG+G+ FL + T + H+V A ++ Sbjct: 89 PAFLSVTDIAGLVRGASSGAGLGNAFLSNIMATDGIFHVVRAFDD 133 >gi|115625814|ref|XP_788099.2| PREDICTED: similar to developmentally regulated GTP binding protein 2 [Strongylocentrotus purpuratus] gi|115973267|ref|XP_001182523.1| PREDICTED: similar to developmentally regulated GTP binding protein 2 [Strongylocentrotus purpuratus] Length = 221 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 13/119 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L ++T+ + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTLLNTMTKTHSESAAYAFTTLTCIPGVIEYNGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A QG G G + + +++ ++ A + +VQ + L K++E VGL Sbjct: 123 ASQGKGRGRQVIAVARTADLVVMMLDANKGDVQ-------------KNLLEKELESVGL 168 >gi|94500521|ref|ZP_01307052.1| probable GTP-binding protein [Oceanobacter sp. RED65] gi|94427311|gb|EAT12290.1| probable GTP-binding protein [Oceanobacter sp. RED65] Length = 436 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 5/110 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST ++T AK AD F TL P L I +G E +L D G I++ Sbjct: 201 VSLVGYTNAGKSTLFNALTEAKVYAADQLFATLDPTLRRIPIQGLGEVVLVDTVGFIRHL 260 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYN 266 H+ L+ T+ +LLH++ + +E+ Q + +LDE+ A + Sbjct: 261 PHKLVEAFKATLQETQEADLLLHVIDSADEDRQLNMEQVEIVLDEIEALD 310 >gi|6319281|ref|NP_009364.1| Rbg1p [Saccharomyces cerevisiae S288c] gi|731276|sp|P39729|RBG1_YEAST RecName: Full=Ribosome-interacting GTPase 1; AltName: Full=GTP-binding protein RBG1; AltName: Full=Genetically interacts with ribosomal genes protein 1 gi|595548|gb|AAC04995.1| Fun11p [Saccharomyces cerevisiae] gi|51013535|gb|AAT93061.1| YAL036C [Saccharomyces cerevisiae] gi|151941355|gb|EDN59726.1| ribosome interacting GTPase [Saccharomyces cerevisiae YJM789] gi|190406685|gb|EDV09952.1| developmentally regulated GTP-binding protein 1 [Saccharomyces cerevisiae RM11-1a] gi|207348036|gb|EDZ74016.1| YAL036Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|259144670|emb|CAY77611.1| Rbg1p [Saccharomyces cerevisiae EC1118] gi|285810165|tpg|DAA06951.1| TPA: Rbg1p [Saccharomyces cerevisiae S288c] gi|323349930|gb|EGA84140.1| Rbg1p [Saccharomyces cerevisiae Lalvin QA23] gi|323356348|gb|EGA88149.1| Rbg1p [Saccharomyces cerevisiae VL3] Length = 369 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 14/137 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G +G P+ GKST L+ +T + + A+Y FTTL G+++ + + D+PGII Sbjct: 65 VASVGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTLVTVPGVIRYKGAKIQMLDLPGIID 124 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A G G G + + RT LL I+ L+ N ++ I++ K++E VG+ Sbjct: 125 GAKDGRGRGKQVIA-VARTCNLLFII--LDVNKPLHHKQIIE----------KELEGVGI 171 Query: 279 SQIDTVDSDTLARKKNE 295 +++ D L +KK + Sbjct: 172 -RLNKTPPDILIKKKEK 187 >gi|227542961|ref|ZP_03973010.1| possible GTPase ObgE [Corynebacterium glucuronolyticum ATCC 51866] gi|227181183|gb|EEI62155.1| possible GTPase ObgE [Corynebacterium glucuronolyticum ATCC 51866] Length = 288 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 11/138 (7%) Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SALE--ENVQAAYQCIL 259 G+ F +AD+PG+I A +G G+G FL+H ER VL+H+V + LE + + + + Sbjct: 2 GHDAFTIADVPGLIPGASEGKGLGHDFLRHIERCAVLVHVVDTATLEPGRDPVSDIEALE 61 Query: 260 DELSAY------NSELRKKIEIVGLSQIDTVDSDTLARKKNE-LATQCGQVPFEFSSITG 312 EL+AY +S+L ++ + L++ D ++ LA +E L + G F S++ Sbjct: 62 KELAAYKELLPEDSDLLERPRFIVLNKTDVPEALELAEFVSEDLKEKFGWPIFIISTVAR 121 Query: 313 HGIPQILECLHDKIFSIR 330 G+ + L + + R Sbjct: 122 KGLDPLRYALMEAVAERR 139 >gi|323137101|ref|ZP_08072181.1| GTP-binding protein YchF [Methylocystis sp. ATCC 49242] gi|322397862|gb|EFY00384.1| GTP-binding protein YchF [Methylocystis sp. ATCC 49242] Length = 365 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A A + A+YPF T+ PN+G V G K+ I Sbjct: 6 GIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGEVAVPDPRLDDLARIAGSKQII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+++ A +G G+G++FL + + H+V E+ Sbjct: 66 PTRLTFVDIAGLVRGASKGEGLGNQFLANIRECDAIAHVVRCFED 110 >gi|298675760|ref|YP_003727510.1| small GTP-binding protein [Methanohalobium evestigatum Z-7303] gi|298288748|gb|ADI74714.1| small GTP-binding protein [Methanohalobium evestigatum Z-7303] Length = 364 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 51/89 (57%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L +T A+ ++ADY FTTL G+++ + + D+PG++K Sbjct: 62 ATVSLVGFPSVGKSTLLNKLTGAQSEVADYEFTTLEVIPGVLEYKGAKIQMLDVPGLVKG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + +++++ I+ + Sbjct: 122 AASGRGRGKEVISVIRNSNLVVFILDVFQ 150 >gi|268326250|emb|CBH39838.1| conserved hypothetical protein, GTPase family [uncultured archaeon] Length = 366 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 9/113 (7%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLY--PNLGIVKEGYKEFILADIPGII 217 A I ++G P+ GKST L S+T ++A Y FTTLY P I K +F+ D+PG+I Sbjct: 64 ATIVLVGFPSVGKSTLLNSLTGTSAEVAAYEFTTLYVIPGTLIYKGAQLQFL--DVPGLI 121 Query: 218 KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR 270 + A G G G + ++L +V + Q Y +L EL Y++ +R Sbjct: 122 QGAAAGRGHGKEVISVMRNADLILILVDIFQ---QQQYDILLKEL--YDAGIR 169 >gi|72382585|ref|YP_291940.1| GTP-dependent nucleic acid-binding protein EngD [Prochlorococcus marinus str. NATL2A] gi|72002435|gb|AAZ58237.1| Conserved hypothetical protein 92:GTP-binding protein [Prochlorococcus marinus str. NATL2A] Length = 363 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V A+ + A++PF T+ PN+G V K+ I Sbjct: 5 GIVGLPNVGKSTLFNALVANAQAQAANFPFCTIEPNVGSVSVPDQRLNLLGELSNSKQII 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + ++H++ ++ Sbjct: 65 PTRMEFVDIAGLVKGASKGEGLGNKFLANIREVDAIVHVIRCFSDD 110 >gi|256270522|gb|EEU05706.1| Rbg1p [Saccharomyces cerevisiae JAY291] Length = 369 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 14/137 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G +G P+ GKST L+ +T + + A+Y FTTL G+++ + + D+PGII Sbjct: 65 VASVGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTLVTVPGVIRYKGAKIQMLDLPGIID 124 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A G G G + + RT LL I+ L+ N ++ I++ K++E VG+ Sbjct: 125 GAKDGRGRGKQVIA-VARTCNLLFII--LDVNKPLHHKQIIE----------KELEGVGI 171 Query: 279 SQIDTVDSDTLARKKNE 295 +++ D L +KK + Sbjct: 172 -RLNKTPPDILIKKKEK 187 >gi|212224432|ref|YP_002307668.1| Hypothetical GTPase [Thermococcus onnurineus NA1] gi|212009389|gb|ACJ16771.1| Hypothetical GTPase [Thermococcus onnurineus NA1] Length = 388 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 1/113 (0%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I + GLPN GKS+ + ++T +ADY FTT+ P G++ + L ++PG+++ Sbjct: 83 AQIVLAGLPNVGKSSLMKALTNVDIDVADYAFTTVEPIPGMMHHKDVQIQLVEVPGLVEG 142 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G+G + L R + IV L ++ + +L E +L K+ Sbjct: 143 AALGKGMGPQLLSVI-RNADAIAIVVDLSQDPVKQMEILLREFERAGIKLNKR 194 >gi|45358685|ref|NP_988242.1| translation-associated GTPase [Methanococcus maripaludis S2] gi|45047551|emb|CAF30678.1| GTP1/OBG family:ATP/GTP-binding site motif A (P-loop):TGS domain [Methanococcus maripaludis S2] Length = 392 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 24/112 (21%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG---IVKEG----------- 204 +A +G++G PN GKST ++T I +YPFTT+ PN+G + K Sbjct: 1 MAILGLVGKPNVGKSTTFNAMTEKIADIGNYPFTTINPNIGTSFVTKPCPCDTLNLKCTP 60 Query: 205 ----------YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 Y + D+ G++ +AH+G G+G++FL + + +V A Sbjct: 61 NNSKCFSGMRYIPVEVIDVAGLVPDAHKGKGMGNKFLDDLRQADAFILVVDA 112 >gi|6321649|ref|NP_011726.1| hypothetical protein YGR210C [Saccharomyces cerevisiae S288c] gi|1176059|sp|P42942|YG4I_YEAST RecName: Full=Uncharacterized GTP-binding protein YGR210C gi|790501|emb|CAA89003.1| unknown [Saccharomyces cerevisiae] gi|1165215|gb|AAA85585.1| ORFS7; Method: conceptual translation supplied by author [Saccharomyces cerevisiae] gi|1323377|emb|CAA97237.1| unnamed protein product [Saccharomyces cerevisiae] gi|151943487|gb|EDN61798.1| conserved protein [Saccharomyces cerevisiae YJM789] gi|285812404|tpg|DAA08304.1| TPA: hypothetical protein YGR210C [Saccharomyces cerevisiae S288c] Length = 411 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 26/109 (23%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-----------------IVKEG 204 IGI+G P++GKST L S+T A + +PFTT+ PN + K Sbjct: 7 IGIVGKPSSGKSTTLNSLTDAGAAVGAFPFTTIEPNQATGYLQVECACSRFGKEDLCKPN 66 Query: 205 Y------KEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 Y K I L D+ G++ AH G G+G++FL L+H+V Sbjct: 67 YGWCSKGKRHIPIKLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVV 115 >gi|13541916|ref|NP_111604.1| GTPase [Thermoplasma volcanium GSS1] gi|14325347|dbj|BAB60251.1| GTP-binding protein [Thermoplasma volcanium GSS1] Length = 325 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 28/54 (51%), Positives = 35/54 (64%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G+PN GKS+ LAS+T AKPKIA YPFTT +G + G + D PGI+ Sbjct: 169 IAGMPNVGKSSLLASLTTAKPKIASYPFTTKNVIIGYNESGSERIQFIDTPGIL 222 >gi|242042553|ref|XP_002468671.1| hypothetical protein SORBIDRAFT_01g050020 [Sorghum bicolor] gi|241922525|gb|EER95669.1| hypothetical protein SORBIDRAFT_01g050020 [Sorghum bicolor] Length = 399 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 2/111 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L +T + A Y FTTL GI+ + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIEGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 +G G G + + + + ++L ++ A + Q + EL A L K+ Sbjct: 125 EGKGRGRQVIAVAKSSDLVLMVLDA--SKSEGHRQILTRELEAVGLRLNKR 173 >gi|261342834|ref|ZP_05970692.1| GTP-binding protein HflX [Enterobacter cancerogenus ATCC 35316] gi|288314876|gb|EFC53814.1| GTP-binding protein HflX [Enterobacter cancerogenus ATCC 35316] Length = 426 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 13/173 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNQITEAQVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKI 273 ++ H L+ T + +LLH++ A + VQ A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIDAVNVVLEEIEAH-------- 308 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI L ++ +D + + + + S+ TG G+P + + L +++ Sbjct: 309 EIPTLLVMNKIDMLEDFEPRIDRDEENKPIRVWLSAQTGVGVPLLFQALTERL 361 >gi|297618788|ref|YP_003706893.1| GTPase domain-containing protein [Methanococcus voltae A3] gi|297377765|gb|ADI35920.1| GTPase of unknown function domain protein [Methanococcus voltae A3] Length = 394 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 24/112 (21%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI------------------ 200 +A +G++G PN GKST ++T I +YPFTT+ PN+G Sbjct: 1 MAILGLLGKPNVGKSTTFNALTENTADIGNYPFTTINPNIGTSYVTKNCACTELNVKCNP 60 Query: 201 ----VKEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 ++G Y + D+ G++ AH+G G+G++FL + + +V A Sbjct: 61 NNSKCEDGIRYVPVEIIDVAGLVPEAHKGKGMGNKFLDDLRQADAFILVVDA 112 >gi|255082464|ref|XP_002504218.1| predicted protein [Micromonas sp. RCC299] gi|226519486|gb|ACO65476.1| predicted protein [Micromonas sp. RCC299] Length = 409 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 9/118 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L +T + A Y FTTL G++ + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTLLTQLTGTDSEAAAYEFTTLTCIPGVIHYNDAKIQLLDLPGIIEGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G G G + + + + ++L ++ A + E + Y A+ L +++E VGL Sbjct: 125 EGKGRGRQVIAVAKSSDLILMVLDATKSEAANSRY--------AHKEILTRELEAVGL 174 >gi|150951542|ref|XP_001387879.2| Predicted GTP-binding protein (ODN superfamily) [Scheffersomyces stipitis CBS 6054] gi|149388680|gb|EAZ63856.2| Predicted GTP-binding protein (ODN superfamily) [Pichia stipitis CBS 6054] Length = 396 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 45/140 (32%), Positives = 60/140 (42%), Gaps = 32/140 (22%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTLYPNLGIV----------KEGYKE-- 207 GI+GL N GKSTF ++TR P A+YPF T+ P V E YK Sbjct: 25 GIVGLANVGKSTFFQAITRCPLGNP--ANYPFATIEPEEARVIVPSPRFEKLCELYKPKS 82 Query: 208 -----FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQ 252 + DI G+ K AH G G+G+ FL + + +V A E+ N Sbjct: 83 EVPAFMTIYDIAGLTKGAHAGEGLGNNFLANIRAVDAIFQVVRAFEDSEIIHINDEVNPY 142 Query: 253 AAYQCILDELSAYNSELRKK 272 A + I DEL + E K Sbjct: 143 ADLEIIKDELRLKDIEFATK 162 >gi|124026292|ref|YP_001015408.1| translation-associated GTPase [Prochlorococcus marinus str. NATL1A] gi|123961360|gb|ABM76143.1| probable GTP-binding protein [Prochlorococcus marinus str. NATL1A] Length = 363 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A V A+ + A++PF T+ PN+G V K+ I Sbjct: 5 GIVGLPNVGKSTLFNALVANAQAQAANFPFCTIEPNVGSVSVPDQRLNLLGELSNSKQII 64 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++K A +G G+G++FL + ++H++ ++ Sbjct: 65 PTRMEFVDIAGLVKGASKGEGLGNKFLANIREVDAIVHVIRCFRDD 110 >gi|11499729|ref|NP_070971.1| GTP-binding protein [Archaeoglobus fulgidus DSM 4304] gi|2648391|gb|AAB89108.1| GTP-binding protein [Archaeoglobus fulgidus DSM 4304] Length = 355 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/68 (44%), Positives = 40/68 (58%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +IG P+ GKST L +T AK ++ADY FTTL P GI+ + D+PGII+ A G Sbjct: 68 LIGYPSVGKSTLLNKLTGAKSEVADYDFTTLKPVPGILNYKGASIQIIDVPGIIEGAASG 127 Query: 224 AGIGDRFL 231 G G + Sbjct: 128 RGRGKEVI 135 >gi|50294916|ref|XP_449869.1| hypothetical protein [Candida glabrata CBS 138] gi|49529183|emb|CAG62849.1| unnamed protein product [Candida glabrata] Length = 369 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G +G P+ GKST L+ +T + + A+Y FTTL G+++ + + D+PGII Sbjct: 65 VASVGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTLVTVPGVIRYKGAKIQMLDLPGIID 124 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT LL IV Sbjct: 125 GAKDGRGRGKQVIA-VARTCNLLFIV 149 >gi|328766003|gb|EGF76081.1| hypothetical protein BATDEDRAFT_33861 [Batrachochytrium dendrobatidis JAM81] Length = 406 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 20/133 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYKE---- 207 +GI+GLPN GKS+F S+T + ++PF T+ P V + YK Sbjct: 23 MGIVGLPNVGKSSFFNSLTNSSVPSENFPFCTIDPAEARVAVPDTRFDWLCDFYKPASKI 82 Query: 208 ---FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 + DI G++K A +G G+G+ FL H + + H+ A +++ + +D + Sbjct: 83 PAYLTVIDIAGLVKGAAEGQGLGNAFLSHIKAVDGIFHLCRAFDDSEIVHVEGEIDPVRD 142 Query: 262 LSAYNSELRKKIE 274 L + ELR K E Sbjct: 143 LEIIHEELRLKDE 155 >gi|288559438|ref|YP_003422924.1| translation-associated GTPase [Methanobrevibacter ruminantium M1] gi|288542148|gb|ADC46032.1| translation-associated GTPase [Methanobrevibacter ruminantium M1] Length = 395 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL----------------------YPNLG 199 I + G PN GKS+F S T ++ ++A+YPFTT+ PN Sbjct: 4 IAVTGKPNVGKSSFFNSATASQVEMANYPFTTIDANKAVGHVISECPCKELGVTCNPNNS 63 Query: 200 IVKEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 +G + L D+ G++ AH+G G+G++FL + V +H++ A Sbjct: 64 QCIDGTRLIPIELIDVAGLVPGAHEGKGLGNKFLDDLMQAKVFIHVIDA 112 >gi|197127120|gb|ACH43618.1| putative developmentally regulated GTP binding protein 2 variant 1 [Taeniopygia guttata] Length = 364 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 4/97 (4%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLY--PNLGIVKEGYKEFILADIPGII 217 A + +IG P+ GKSTFL+ +T + A Y FTT + P L K K+ + D+PGII Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTFFCIPPLIEYKGANKQVL--DLPGII 120 Query: 218 KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 + A QG G G + + V++ ++ A + VQ A Sbjct: 121 EGAAQGKGRGRQVIAVARTADVVIMMLDATKGEVQRA 157 >gi|290561493|gb|ADD38147.1| GTP-binding protein 128up [Lepeophtheirus salmonis] Length = 367 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG IG P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 64 ARIGFIGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + RT L+ IV + + +Q + I EL + L KK Sbjct: 124 AKDGKGRGRQVIA-VARTASLIFIVLDVLKPLQHK-RLIEKELEGFGIRLNKK 174 >gi|225712416|gb|ACO12054.1| GTP-binding protein 128up [Lepeophtheirus salmonis] Length = 367 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG IG P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 64 ARIGFIGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + RT L+ IV + + +Q + I EL + L KK Sbjct: 124 AKDGKGRGRQVIA-VARTASLIFIVLDVLKPLQHK-RLIEKELEGFGIRLNKK 174 >gi|159905927|ref|YP_001549589.1| translation-associated GTPase [Methanococcus maripaludis C6] gi|159887420|gb|ABX02357.1| GTPase of unknown function domain protein [Methanococcus maripaludis C6] Length = 392 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 24/112 (21%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG---IVKEG----------- 204 +A +G++G PN GKST ++T I +YPFTT+ PN+G + K Sbjct: 1 MAILGLVGKPNVGKSTTFNAMTEKIADIGNYPFTTINPNIGTSFVTKPCPCDTLNLKCNP 60 Query: 205 ----------YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 Y + D+ G++ +AH+G G+G++FL + + +V A Sbjct: 61 NNSKCFSGMRYIPVEVIDVAGLVPDAHKGKGMGNKFLDDLRQADAFILVVDA 112 >gi|134045506|ref|YP_001096992.1| translation-associated GTPase [Methanococcus maripaludis C5] gi|132663131|gb|ABO34777.1| GTP-binding conserved hypothetical protein TIGR00650 [Methanococcus maripaludis C5] Length = 392 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 24/112 (21%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG---IVKEG----------- 204 +A +G++G PN GKST ++T I +YPFTT+ PN+G + K Sbjct: 1 MAILGLVGKPNVGKSTTFNAMTEKIADIGNYPFTTINPNIGTSFVTKPCPCDTLNLNCTP 60 Query: 205 ----------YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 Y + D+ G++ +AH+G G+G++FL + + +V A Sbjct: 61 NNSKCFSGLRYIPVEVIDVAGLVPDAHKGKGMGNKFLDDLRQADAFILVVDA 112 >gi|157876922|ref|XP_001686802.1| developmentally regulated GTP-binding protein 1 [Leishmania major strain Friedlin] gi|68129877|emb|CAJ09183.1| putative developmentally regulated GTP-binding protein 1 [Leishmania major strain Friedlin] Length = 368 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG IG P+ GKST L+ +T ++A Y FTTL G+V + + D+PGII+ Sbjct: 64 ARIGFIGFPSVGKSTLLSKMTSTHSEVAAYEFTTLTCVPGVVNYRGAKLQMLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A G G G + + RT L+ IV + + +Q Sbjct: 124 AKDGKGRGRQVIA-VARTCSLILIVLDIAKPLQ 155 >gi|328868816|gb|EGG17194.1| Developmentally regulated GTP-binding protein [Dictyostelium fasciculatum] Length = 364 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 49/93 (52%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L +T + ADY FTTL G+++ L D PGII+ Sbjct: 63 ARVALIGFPSVGKSTILTKLTDTQSAQADYEFTTLTCIPGVIQYHGARIQLLDTPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ + + +Q Sbjct: 123 ASQGRGRGKQVISVARTADLILMMLDSSKGEIQ 155 >gi|255713022|ref|XP_002552793.1| KLTH0D01584p [Lachancea thermotolerans] gi|238934173|emb|CAR22355.1| KLTH0D01584p [Lachancea thermotolerans] Length = 368 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 1/86 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G +G P+ GKST L+ +T + + A+Y FTTL G+++ + D+PGII Sbjct: 64 VASVGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTLVTVPGVIRYKGARIQMLDLPGIID 123 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT LL IV Sbjct: 124 GAKDGRGRGKQVIA-VARTCNLLFIV 148 >gi|150402300|ref|YP_001329594.1| translation-associated GTPase [Methanococcus maripaludis C7] gi|150033330|gb|ABR65443.1| GTPase-like protein [Methanococcus maripaludis C7] Length = 392 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 24/112 (21%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG---IVKEG----------- 204 +A +G++G PN GKST ++T I +YPFTT+ PN+G + K Sbjct: 1 MAILGLVGKPNVGKSTTFNAMTEKIADIGNYPFTTINPNIGTSFVTKPCPCDTLDLKCTP 60 Query: 205 ----------YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 Y + D+ G++ +AH+G G+G++FL + + +V A Sbjct: 61 NNSKCFAGMRYIPVEVIDVAGLVPDAHKGKGMGNKFLDDLRQADAFILVVDA 112 >gi|223996789|ref|XP_002288068.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220977184|gb|EED95511.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 410 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 22/109 (20%) Query: 162 IGIIGLPNAGKSTF---LASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFI------- 209 +G +GLPN GKST LA A+ A+YPF T+ PN+ IV + +++ Sbjct: 15 MGFVGLPNVGKSTLTNLLAGACHAEA--ANYPFCTIDPNMVQAIVPDQKFKYLVDCWKPP 72 Query: 210 --------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+I A +GAG+G+ FL H + H+V A + + Sbjct: 73 SVVPAVLKIVDIAGLIAGASEGAGLGNAFLSHIAAVDGIFHLVRAFDSD 121 >gi|45188245|ref|NP_984468.1| ADR372Cp [Ashbya gossypii ATCC 10895] gi|44983089|gb|AAS52292.1| ADR372Cp [Ashbya gossypii ATCC 10895] Length = 368 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G +G P+ GKST L+ +T + + A+Y FTTL G+++ + + D+PGII Sbjct: 64 VASVGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTLVTVPGVIRYKGAKIQMLDLPGIID 123 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT LL IV Sbjct: 124 GAKDGRGRGRQVIA-VARTCNLLFIV 148 >gi|146104415|ref|XP_001469818.1| developmentally regulated GTP-binding protein 1 [Leishmania infantum] gi|134074188|emb|CAM72930.1| putative developmentally regulated GTP-binding protein 1 [Leishmania infantum JPCM5] gi|322503590|emb|CBZ38676.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 368 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG IG P+ GKST L+ +T ++A Y FTTL G+V + + D+PGII+ Sbjct: 64 ARIGFIGFPSVGKSTLLSKMTSTHSEVAAYEFTTLTCVPGVVNYRGAKLQMLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A G G G + + RT L+ IV + + +Q Sbjct: 124 AKDGKGRGRQVIA-VARTCSLILIVLDIAKPLQ 155 >gi|213406077|ref|XP_002173810.1| GTP-binding protein [Schizosaccharomyces japonicus yFS275] gi|212001857|gb|EEB07517.1| GTP-binding protein [Schizosaccharomyces japonicus yFS275] Length = 410 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 32/112 (28%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA---------- 211 IG +G P++GKST L ++T A K +PFTT+ PN + GY + A Sbjct: 7 IGFVGKPSSGKSTMLNALTDATAKTGSFPFTTIEPNRAV---GYVQIDCACSRYGLEDKC 63 Query: 212 -------------------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 D+ G+I AH G G+G++FL L+H+V Sbjct: 64 KPLYGGCTNGRRSVPIQLLDVAGLIPGAHAGKGLGNKFLDDLRHADALVHVV 115 >gi|156091836|ref|XP_001612387.1| developmentally regulated GTP-binding protein 1 [Plasmodium vivax SaI-1] gi|148801189|gb|EDL42594.1| developmentally regulated GTP-binding protein 1, putative [Plasmodium vivax] Length = 390 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 4/114 (3%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG++G P+ GKST L +T ++A Y FTTL GI K + L D+PGII+ Sbjct: 64 ARIGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCVPGIFKYKGAKMQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-ELSAYNSELRKK 272 A G G G + + + ++L ++ L+ ++ I++ EL + L KK Sbjct: 124 AKDGKGRGKQVIAVAKSCSLILIVLDVLKP---LTFKKIIEKELEGFGIRLNKK 174 >gi|156932404|ref|YP_001436320.1| putative GTPase HflX [Cronobacter sakazakii ATCC BAA-894] gi|156530658|gb|ABU75484.1| hypothetical protein ESA_00183 [Cronobacter sakazakii ATCC BAA-894] Length = 426 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 19/176 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNQITTAEVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A + EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRMAENIEAV-NTVLEEIDAH------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQILECLHDKI 326 EI L ++ V D L + + VP S+ TG G+P + + L +++ Sbjct: 309 -EIPTLLVMNKV--DMLEDFEPRIDRNDENVPIRVWLSAQTGAGVPLLFQALTERL 361 >gi|260220333|emb|CBA27765.1| hypothetical protein Csp_A03920 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 206 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 38/59 (64%), Positives = 47/59 (79%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDF 59 MKF+DEA + I +GDGGAG +SFR EK+ EFGGP+GG GGRGG V+ A NLNTL+D+ Sbjct: 1 MKFVDEAYIDISAGDGGAGCVSFRHEKYKEFGGPNGGDGGRGGHVFAVADPNLNTLVDY 59 >gi|322490812|emb|CBZ26076.1| developmentally regulated GTP-binding protein 1,putative [Leishmania mexicana MHOM/GT/2001/U1103] Length = 368 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG IG P+ GKST L+ +T ++A Y FTTL G+V + + D+PGII+ Sbjct: 64 ARIGFIGFPSVGKSTLLSKMTSTHSEVAAYEFTTLTCVPGVVNYRGAKLQMLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A G G G + + RT L+ IV + + +Q Sbjct: 124 AKDGKGRGRQVIA-VARTCSLILIVLDIAKPLQ 155 >gi|311264464|ref|XP_003130187.1| PREDICTED: GTP-binding protein 10-like [Sus scrofa] Length = 319 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 73/294 (24%), Positives = 111/294 (37%), Gaps = 106/294 (36%) Query: 36 GGSGGRG-----------GDVWIQATS--NLNTLIDFRYQQHFKAQHGEKGMKRNRSGAK 82 GGSGG G GDVW+ A + L L D Q+ F A G G+K Sbjct: 25 GGSGGMGYPRLGGEGGKGGDVWVVAHNKMTLKQLKDKYPQKRFVAGEGANSRVSALKGSK 84 Query: 83 GEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYAN 142 G+D + VPVG V +E+G I D+ +L P Sbjct: 85 GKDCEIPVPVGISVTDENG--KIIDVQ------VLPPK---------------------- 114 Query: 143 PGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK 202 IW ++ + KS+F+ ++ +AD P Sbjct: 115 ---------IWFQI------------SRAKSSFIIVIS-----VADLP------------ 136 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILD 260 G+I+ AH G+G +FLKH ERT LL +V S + + Q Y+ + Sbjct: 137 ------------GLIEGAHMNKGMGHKFLKHIERTKQLLFVVDISGFQLSSQTRYRTAFE 184 Query: 261 -------ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF 307 EL Y EL+ K ++ ++++D D A+ K ++ Q P +F Sbjct: 185 TIILLTKELELYKEELQTKPALLAVNKMDLPD----AQDKFQVLMNQLQSPKDF 234 >gi|260599479|ref|YP_003212050.1| GTPase HflX [Cronobacter turicensis z3032] gi|260218656|emb|CBA33983.1| GTP-binding protein hflX [Cronobacter turicensis z3032] Length = 426 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 19/176 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNQITTAEVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A + EN++A +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRMAENIEAV-NTVLEEIDAH------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQILECLHDKI 326 EI L ++ V D L + + VP S+ TG G+P + + L +++ Sbjct: 309 -EIPTLLVMNKV--DMLEDFEPRIDRNDENVPIRVWLSAQTGAGVPLLFQALTERL 361 >gi|302852880|ref|XP_002957958.1| hypothetical protein VOLCADRAFT_77719 [Volvox carteri f. nagariensis] gi|297592089|gb|ADI46874.1| DRG1f [Volvox carteri f. nagariensis] gi|300256724|gb|EFJ40984.1| hypothetical protein VOLCADRAFT_77719 [Volvox carteri f. nagariensis] Length = 368 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L +T + A Y FTTL GIV+ + + D+PGII+ Sbjct: 65 ARVGFVGFPSVGKSTLLTKLTGTYSEAASYEFTTLTCIPGIVRYRGAKIQMLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + +++L ++ L+ + I EL + L KK Sbjct: 125 AKDGKGRGRQVISTARTCNLILIVLDCLKPLTHK--RLIEHELEGFGIRLNKK 175 >gi|240103048|ref|YP_002959357.1| GTP-binding protein [Thermococcus gammatolerans EJ3] gi|239910602|gb|ACS33493.1| GTP-binding protein [Thermococcus gammatolerans EJ3] Length = 388 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 43/72 (59%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I + GLPN GKS+ L ++T +ADY FTT+ P G++ + L ++PG+++ Sbjct: 83 AQIVLAGLPNVGKSSLLRALTNVDVDVADYAFTTVKPIPGMMHHKDVQIQLVEVPGLVEG 142 Query: 220 AHQGAGIGDRFL 231 A G G+G + L Sbjct: 143 AALGKGMGPQLL 154 >gi|198426169|ref|XP_002130383.1| PREDICTED: similar to GF12286 [Ciona intestinalis] Length = 367 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 1/85 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G++K + L D+PGII+ Sbjct: 64 ARIGFVGFPSVGKSTLLSNIAGVYSEVASYEFTTLTTVPGVIKYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT L+ IV Sbjct: 124 AKDGKGRGKQVIA-VARTCSLIFIV 147 >gi|302698167|ref|XP_003038762.1| developmentally regulated GTP-binding protein [Schizophyllum commune H4-8] gi|300112459|gb|EFJ03860.1| developmentally regulated GTP-binding protein [Schizophyllum commune H4-8] Length = 366 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 50/93 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I +IG P+ GKST L+ T + A Y FTTL G+++ L D+PGI++ Sbjct: 63 ARIALIGFPSVGKSTLLSKTTHTASETAAYEFTTLTAIPGVIEYKGARIQLLDLPGIVEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + + +++ ++ A + + Q Sbjct: 123 AAQGRGRGRQVVSTAKTADLIVMMLDATKSDEQ 155 >gi|212696063|ref|ZP_03304191.1| hypothetical protein ANHYDRO_00599 [Anaerococcus hydrogenalis DSM 7454] gi|212676692|gb|EEB36299.1| hypothetical protein ANHYDRO_00599 [Anaerococcus hydrogenalis DSM 7454] Length = 69 Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 22/40 (55%), Positives = 32/40 (80%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV 201 +GI+GLPN GKST ++T+A +IA+YPF T+ PN+G+V Sbjct: 3 LGIVGLPNVGKSTLFNAITKAGAEIANYPFCTIDPNVGLV 42 >gi|260831075|ref|XP_002610485.1| hypothetical protein BRAFLDRAFT_85626 [Branchiostoma floridae] gi|229295851|gb|EEN66495.1| hypothetical protein BRAFLDRAFT_85626 [Branchiostoma floridae] Length = 478 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 25/110 (22%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVK------------------ 202 IG++G P+AGKSTF A++ + + + A +PFTT+ PN G Sbjct: 66 IGLVGKPSAGKSTFFNAAMAQNQARTAAHPFTTIEPNFGTAYFSVPCPCAKMDHRCEAAY 125 Query: 203 -EGYK-----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 YK +L D+ G++ A G G G+RFL VL+HI+ A Sbjct: 126 GHNYKGERLVPVLLKDVAGLVPGAADGKGRGNRFLNDLLDADVLIHIIDA 175 >gi|15679512|ref|NP_276629.1| translation-associated GTPase [Methanothermobacter thermautotrophicus str. Delta H] gi|2622634|gb|AAB85990.1| GTP-binding protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 399 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--------------- 206 I + G PN GKS+F + T ++ ++A YPFTT+ N + + Sbjct: 7 IAVTGKPNVGKSSFFNAATLSEAEVASYPFTTIDANHAVAYASCRCPCRELGVECNPRNS 66 Query: 207 ---------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 L D+ G++ AH+G G+G++FL + LH++ A Sbjct: 67 RCINGVRLIPVELIDVAGLVPGAHEGRGLGNKFLDDLRQARAFLHVIDA 115 >gi|330846689|ref|XP_003295143.1| hypothetical protein DICPUDRAFT_51911 [Dictyostelium purpureum] gi|325074216|gb|EGC28331.1| hypothetical protein DICPUDRAFT_51911 [Dictyostelium purpureum] Length = 370 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G+IG P+ GKST L +T ++A Y FTTL G++ + L D+PGII+ Sbjct: 65 ARVGLIGFPSVGKSTLLTKLTGTSSEVASYEFTTLTCIPGVINYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + +++L ++ +++ V + I EL + L K+ Sbjct: 125 AKDGKGRGRQVIAVGRTCNLILIVLDSMKPLVHK--KIIERELDGFGIRLNKQ 175 >gi|21227149|ref|NP_633071.1| GTP-binding protein [Methanosarcina mazei Go1] gi|20905482|gb|AAM30743.1| GTP-binding protein [Methanosarcina mazei Go1] Length = 364 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 15/133 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G P+ GKST L VT AK ++ Y FTTL G+++ D+PG++K A Sbjct: 65 VTLVGFPSVGKSTLLNKVTGAKSEVGAYEFTTLTVVPGVLEHKGATIQFLDVPGLVKGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQI 281 G G G + + +++ ++ + Y+ ++DEL Y + +R + Sbjct: 125 SGRGRGKEVISVIRNSDMVIFLLDVFQPK---HYEVLMDEL--YQAGIR----------V 169 Query: 282 DTVDSDTLARKKN 294 D V D ++K+ Sbjct: 170 DEVPPDVSIKRKD 182 >gi|219128267|ref|XP_002184338.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404139|gb|EEC44087.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 426 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 22/116 (18%) Query: 155 KLKLIADIGIIGLPNAGKSTF---LASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFI 209 ++K +G +GLPN GKS+ LA A+ A+YPF T+ PN+ IV + ++I Sbjct: 23 RVKNTLTMGFVGLPNVGKSSLTNLLAGAMHAE--AANYPFCTIDPNVVQCIVPDKSFKYI 80 Query: 210 ---------------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+IK A +GAG+G+ FL H + H+V A + + Sbjct: 81 ADCWKPPSVVPAVLKVTDIAGLIKGASEGAGLGNAFLSHIAAVDGIYHLVRAFDSD 136 >gi|156972473|ref|YP_001443380.1| putative GTPase HflX [Vibrio harveyi ATCC BAA-1116] gi|47933919|gb|AAT39525.1| HflX [Vibrio harveyi] gi|156524067|gb|ABU69153.1| hypothetical protein VIBHAR_00093 [Vibrio harveyi ATCC BAA-1116] Length = 429 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 19/185 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +T A AD F TL P L ++ ILAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIELADVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T+ +LLH+V A EN+QA ++ +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAVHE-VLEEIDAH------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFSIR 330 E+ L ++ +D+ L +K + VP S++ G GI + + L +++ S Sbjct: 309 -EVPTLVVMNKIDN--LEEQKPRIERDEEGVPRTVWVSAMDGLGIDLLFDALTERLASQM 365 Query: 331 GENEF 335 E++ Sbjct: 366 VEHQL 370 >gi|15218561|ref|NP_177410.1| developmentally regulated GTP-binding protein, putative [Arabidopsis thaliana] gi|79321186|ref|NP_001031270.1| developmentally regulated GTP-binding protein, putative [Arabidopsis thaliana] gi|79321194|ref|NP_001031271.1| developmentally regulated GTP-binding protein, putative [Arabidopsis thaliana] gi|12323776|gb|AAG51856.1|AC010926_19 putative GTP-binding protein; 56356-53974 [Arabidopsis thaliana] gi|26452818|dbj|BAC43489.1| putative GTP-binding protein [Arabidopsis thaliana] gi|29824115|gb|AAP04018.1| putative GTP-binding protein [Arabidopsis thaliana] gi|332197235|gb|AEE35356.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] gi|332197236|gb|AEE35357.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] gi|332197237|gb|AEE35358.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] Length = 399 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 2/111 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L +T + A Y FTTL G++ + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYNDTKIQLLDLPGIIEGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 +G G G + + + + ++L ++ A + Q + EL A L K+ Sbjct: 125 EGKGRGRQVIAVAKSSDLVLMVLDA--SKSEGHRQILTKELEAVGLRLNKR 173 >gi|75675642|ref|YP_318063.1| GTP-binding protein, HSR1-related [Nitrobacter winogradskyi Nb-255] gi|74420512|gb|ABA04711.1| GTP-binding protein HflX [Nitrobacter winogradskyi Nb-255] Length = 442 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 8/175 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST +TRA + AD F TL P L + + + +L+D G I N Sbjct: 211 VALVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRSLALPHGGKAMLSDTVGFISNL 270 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENV---QAAYQCILDELSAYNSELRKKIEIV 276 Q L+ V+LH+ E+ Q + +L +L + IE+ Sbjct: 271 PTQLVAAFRATLEEVMEADVILHVRDISHEDTEPQQHDVEAVLHQLGIDPDGPARMIEV- 329 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 ++ID D+D +N A + VP F S+ TG G+ +L + D++ + R Sbjct: 330 -WNKIDRFDADQRKDLENVAARRSTDVPRFLVSAETGEGVETLLAAIEDRLAATR 383 >gi|156095358|ref|XP_001613714.1| developmentally regulated GTP-binding protein 1 [Plasmodium vivax SaI-1] gi|148802588|gb|EDL43987.1| developmentally regulated GTP-binding protein 1, putative [Plasmodium vivax] Length = 365 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 4/114 (3%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG++G P+ GKST L +T ++A Y FTTL GI K + L D+PGII+ Sbjct: 63 ARIGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCVPGIFKYKGAKMQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-ELSAYNSELRKK 272 A G G G + + + ++L ++ L+ ++ I++ EL + L KK Sbjct: 123 AKDGKGRGKQVIAVAKSCSLILIVLDVLKP---LTFKKIIEKELEGFGIRLNKK 173 >gi|148981048|ref|ZP_01816268.1| predicted GTPase [Vibrionales bacterium SWAT-3] gi|145961024|gb|EDK26347.1| predicted GTPase [Vibrionales bacterium SWAT-3] Length = 435 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 15/176 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +T A AD F TL P L + ILAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNRITSAGVYAADQLFATLDPTLRKIDLSDVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T+ +LLH+V A EN+QA + +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETQEADILLHVVDASDDRFRENIQAVHD-VLEEIDAHEVPT--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 +V +++ID ++ ++E + S++ G GI + E L +++ S Sbjct: 313 --LVVMNKIDCMEDQKPRIDRDE---EGAPRAVWVSAMEGEGIELLFEALTERLAS 363 >gi|305664275|ref|YP_003860563.1| small GTP-binding protein [Ignisphaera aggregans DSM 17230] gi|304378844|gb|ADM28683.1| small GTP-binding protein [Ignisphaera aggregans DSM 17230] Length = 369 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 8/164 (4%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G+P GKST ++ ++ AKPKI+ YPFTT LG + G + D PGI+ Sbjct: 194 IAGMPQVGKSTLVSKISSAKPKISPYPFTTKNVILGHLDLGSTRIQIMDTPGILDRPLSE 253 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL----RKKIEIVGLS 279 +R RT L +V L + AY I ++ + L ++KI +V + Sbjct: 254 MNDIERRAIAALRT--LQSVVLYLIDPSIDAYYSIDQQIDVLRTVLTIVGKEKILVV-FN 310 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQ-ILECL 322 +ID VD L + L + V E S++ G GI + I+E L Sbjct: 311 KIDKVDGKRLDYCRKLLNSYGYNVDLEISALQGIGIDKLIIEAL 354 >gi|154345864|ref|XP_001568869.1| developmentally regulated GTP-binding protein 1 [Leishmania braziliensis MHOM/BR/75/M2904] gi|134066211|emb|CAM44001.1| putative developmentally regulated GTP-binding protein 1 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 368 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG IG P+ GKST L+ +T ++A Y FTTL G+V + + D+PGII+ Sbjct: 64 ARIGFIGFPSVGKSTLLSKMTSTHSEVAAYEFTTLTCVPGVVNYRGAKLQMLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT L+ IV Sbjct: 124 AKDGKGRGRQIIA-VARTCSLILIV 147 >gi|118376292|ref|XP_001021328.1| GTP1/OBG family protein [Tetrahymena thermophila] gi|89303095|gb|EAS01083.1| GTP1/OBG family protein [Tetrahymena thermophila SB210] Length = 405 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 49/87 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+S+T + A Y FTTL G++ + L D+PGII+ Sbjct: 62 ARVCMIGFPSVGKSTLLSSITETESLAAAYEFTTLTCIPGVINYNDTKIQLLDLPGIIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 A G G G + + + + ++L ++ A Sbjct: 122 AADGRGRGRQVIAVAKASDLVLMVLDA 148 >gi|290561813|gb|ADD38304.1| Developmentally-regulated GTP-binding protein 2 [Lepeophtheirus salmonis] Length = 364 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 51/93 (54%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+++T+ + A FTTL G++ L D+PGII+ Sbjct: 63 ARVAMIGFPSVGKSTLLSTITKTESAQASCEFTTLTCIPGVIDYKGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L I+ A ++++ Sbjct: 123 AAQGKGRGRQVIAVARTADLVLMILDATKKDIH 155 >gi|281203087|gb|EFA77288.1| Developmentally regulated GTP-binding protein 2 [Polysphondylium pallidum PN500] Length = 370 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 50/93 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+ +T + A+Y FTTL G+++ L D PGII+ Sbjct: 63 ARVALIGFPSVGKSTILSKLTSTQSAQAEYEFTTLTCIPGVIQYHGARIQLLDTPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + ++L ++ + + +Q Sbjct: 123 ASQGRGRGKQVISVARTADLILMMLDSTKGEIQ 155 >gi|161528192|ref|YP_001582018.1| small GTP-binding protein [Nitrosopumilus maritimus SCM1] gi|160339493|gb|ABX12580.1| small GTP-binding protein [Nitrosopumilus maritimus SCM1] Length = 369 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + IGLP+ GKST L +T AK + + FTTL G+++ + + D+PGIIK Sbjct: 64 ATVVFIGLPSVGKSTLLNRLTGAKSAVGAFQFTTLTVVPGMMEYRGAKIQVLDLPGIIKG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G+G R L ++L ++ + Sbjct: 124 ASTGKGLGKRILSVARTADLVLLVLDVFQ 152 >gi|188581653|ref|YP_001925098.1| GTP-dependent nucleic acid-binding protein EngD [Methylobacterium populi BJ001] gi|179345151|gb|ACB80563.1| GTP-binding protein YchF [Methylobacterium populi BJ001] Length = 365 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 32/194 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A A + A+YPF T+ PN+G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGEVAVPDPRLDELAKIASSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 DI G+++ A +G G+G++FL + + H+V E+ +V+ I D Sbjct: 66 PTRLTFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVVRCFEDGDVTHVEGKVDPIAD 125 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +EL L+ +D+++ +A +K A + EF + +P + + Sbjct: 126 -IETIETELM-------LADLDSLEKRVVALEKR--AKGSDKEAKEFLDLVNRALPLLRD 175 Query: 321 CLHDKIFSIRGENE 334 ++ + E E Sbjct: 176 GKPARLVERKPEEE 189 >gi|300715041|ref|YP_003739844.1| GTP-binding protein HflX [Erwinia billingiae Eb661] gi|299060877|emb|CAX57984.1| GTP-binding protein HflX [Erwinia billingiae Eb661] Length = 426 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 87/174 (50%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST VT A+ +AD F TL P L + E +LAD G I Sbjct: 197 VPTLSLVGYTNAGKSTLFNRVTAAEVYVADQLFATLDPTLRRIDVADVGEVVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T +L+H++ A ++EN++A + +L+E+ S+ Sbjct: 257 RHLPHDLVAAFKATLQETREATLLVHVIDAADLRVDENIKAV-EVVLEEI---ESDEIPT 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ +++ID +D ++E + V S+ TG GIP + + L +++ Sbjct: 313 LQV--MNKIDMLDGFVPRIDRDE---ENKPVRVWVSAQTGEGIPLLFQALTERL 361 >gi|221056859|ref|XP_002259567.1| developmentally regulated GTP-binding protein 1 [Plasmodium knowlesi strain H] gi|193809639|emb|CAQ40340.1| developmentally regulated GTP-binding protein 1,putative [Plasmodium knowlesi strain H] Length = 365 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 4/114 (3%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG++G P+ GKST L +T ++A Y FTTL GI K + L D+PGII+ Sbjct: 63 ARIGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCVPGIFKYKGAKMQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-ELSAYNSELRKK 272 A G G G + + + ++L ++ L+ ++ I++ EL + L KK Sbjct: 123 AKDGKGRGKQVIAVAKSCSLILIVLDVLKP---LTFKKIIEKELEGFGIRLNKK 173 >gi|227488348|ref|ZP_03918664.1| possible GTPase ObgE [Corynebacterium glucuronolyticum ATCC 51867] gi|227091710|gb|EEI27022.1| possible GTPase ObgE [Corynebacterium glucuronolyticum ATCC 51867] Length = 288 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 11/138 (7%) Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV--SALE--ENVQAAYQCIL 259 G+ F +AD+PG+I A +G G+G FL+H ER VL+H+V + LE + + + + Sbjct: 2 GHDAFTIADVPGLIPGASEGKGLGHDFLRHIERCAVLVHVVDTATLEPGRDPVSDIEALE 61 Query: 260 DELSAY------NSELRKKIEIVGLSQIDTVDSDTLARKKNE-LATQCGQVPFEFSSITG 312 EL+AY +S+L ++ + L++ D ++ LA +E L + G F S++ Sbjct: 62 KELAAYKELLPEDSDLLERPRFIVLNKTDVPEALELAEFVSEDLKEKFGWPIFIISTVAR 121 Query: 313 HGIPQILECLHDKIFSIR 330 G+ + L + + R Sbjct: 122 KGLDPLRYALMEVVAERR 139 >gi|156083024|ref|XP_001608996.1| GTP binding protein [Babesia bovis T2Bo] gi|154796246|gb|EDO05428.1| GTP binding protein, putative [Babesia bovis] Length = 355 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 4/111 (3%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I +IG P+ GKST ++T ADY FTTL GI+ + L D+PGI+ Sbjct: 50 ARICLIGFPSVGKSTLSNALTNMNSATADYEFTTLTCVPGIMMYKAAKIQLLDLPGILDG 109 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR 270 A +G G G + + ++L I+ A +++ Q +C L E +N+ +R Sbjct: 110 ASEGRGRGRQVIAVANSCDLVLMILDATKDDSQ---KCKL-ERELHNAGIR 156 >gi|146317668|ref|YP_001197380.1| GTP-dependent nucleic acid-binding protein EngD [Streptococcus suis 05ZYH33] gi|145688474|gb|ABP88980.1| Predicted GTPase, probable translation factor [Streptococcus suis 05ZYH33] Length = 363 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 18/95 (18%) Query: 175 FLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFIL-----------ADIPGII 217 +LA T+A + A+YPF T+ PN+G+V+ + E I+ DI GI+ Sbjct: 10 YLAQFTKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELIIPKKTVPTTFEFTDIAGIV 69 Query: 218 KNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 K A +G G+G++FL + ++H+V A +ENV Sbjct: 70 KGASKGEGLGNKFLANIREVDAIVHVVRAFDDENV 104 >gi|57641221|ref|YP_183699.1| GTPase [Thermococcus kodakarensis KOD1] gi|57159545|dbj|BAD85475.1| predicted GTPase, GTP1/OBG family, containing TGS domain [Thermococcus kodakarensis KOD1] Length = 388 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 43/72 (59%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I + GLPN GKS+ + ++T +ADY FTT+ P G++ + L ++PG+++ Sbjct: 83 AQIVLAGLPNVGKSSLMRALTNVDADVADYAFTTVEPIPGMMHHKDVQIQLVEVPGLVEG 142 Query: 220 AHQGAGIGDRFL 231 A G G+G + L Sbjct: 143 AALGKGMGPQLL 154 >gi|304313876|ref|YP_003849023.1| GTP-binding protein [Methanothermobacter marburgensis str. Marburg] gi|302587335|gb|ADL57710.1| predicted GTP-binding protein [Methanothermobacter marburgensis str. Marburg] Length = 396 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--------------- 206 I + G PN GKS+F + T ++ ++A YPFTT+ N + + Sbjct: 4 IAVTGKPNVGKSSFFNAATLSEAEVASYPFTTIDANHAVAYASCRCPCQELGVQCNPKNS 63 Query: 207 ---------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 L D+ G++ AH+G G+G++FL + LH++ A Sbjct: 64 RCIDGTRLIPVELIDVAGLVPGAHEGRGLGNKFLDDLRQARAFLHVIDA 112 >gi|313126214|ref|YP_004036484.1| hypothetical protein Hbor_14600 [Halogeometricum borinquense DSM 11551] gi|312292579|gb|ADQ67039.1| GTP-binding conserved hypothetical protein TIGR00650 [Halogeometricum borinquense DSM 11551] Length = 396 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 24/107 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL----------------------YPNLG 199 IG++G P+ GKS+F + T YPFTT+ P++G Sbjct: 5 IGLVGKPSVGKSSFFNAATMNDVPEGAYPFTTIDPSVGEAYVRVDCAAPEFDETCTPSVG 64 Query: 200 IVKEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G Y L D+ G+I AH+G G+G++FL VL+H+V Sbjct: 65 FCDNGTRYVPVKLVDVAGLIPGAHEGKGLGNQFLTDLNEADVLVHVV 111 >gi|197128816|gb|ACH45314.1| putative developmentally regulated GTP binding protein 1 [Taeniopygia guttata] Length = 248 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|49257324|gb|AAH73378.1| Xdrg protein [Xenopus laevis] Length = 334 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+V+ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVVRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K+ +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNKQPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|183600314|ref|ZP_02961807.1| hypothetical protein PROSTU_03876 [Providencia stuartii ATCC 25827] gi|188020104|gb|EDU58144.1| hypothetical protein PROSTU_03876 [Providencia stuartii ATCC 25827] Length = 426 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 21/177 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKS+ +T + AD F TL P L + E +LAD G I Sbjct: 197 IPTISLVGYTNAGKSSLFNRMTASDVYAADQLFATLDPTLRRINVEDVGPVVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T +LLH++ A L+EN+ A + +L+E+ A Sbjct: 257 RHLPHDLVAAFKATLQETREATLLLHVIDAADSRLDENIHAV-ESVLEEIEAD------- 308 Query: 273 IEIVGLSQIDTVD--SDTLAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI L ++ VD D + R +NE V S+ TG GIP +L+ L +++ Sbjct: 309 -EIPTLLVMNKVDMLEDFIPRIDRNE---DNKPVRVWVSAQTGDGIPLLLQALTERL 361 >gi|163802746|ref|ZP_02196636.1| GTP-binding protein HflX [Vibrio sp. AND4] gi|159173453|gb|EDP58275.1| GTP-binding protein HflX [Vibrio sp. AND4] Length = 429 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 19/178 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +T+A AD F TL P L ++ ILAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNRITQAGVYAADQLFATLDPTLRKIELADVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H LK T+ +LLH+V A EN+QA ++ +L+E+ A Sbjct: 257 RHLPHDLVAAFKATLKETQEADILLHVVDASDERFRENIQAVHE-VLEEIDAD------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFS 328 E+ L ++ +D+ L +K + VP S++ G GI + + L +++ S Sbjct: 309 -EVPTLVVMNKIDN--LEEQKPRIERDEEGVPRAVWVSAMDGLGIELLFDALTERLAS 363 >gi|62858781|ref|NP_001016294.1| developmentally regulated GTP binding protein 1 [Xenopus (Silurana) tropicalis] gi|89266825|emb|CAJ83901.1| developmentally regulated GTP binding protein 1 [Xenopus (Silurana) tropicalis] gi|111598436|gb|AAH80366.1| developmentally regulated GTP binding protein 1 [Xenopus (Silurana) tropicalis] Length = 367 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+V+ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVVRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K+ +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNKQPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|148232515|ref|NP_001084013.1| developmentally-regulated GTP-binding protein 1 [Xenopus laevis] gi|1169421|sp|P43690|DRG1_XENLA RecName: Full=Developmentally-regulated GTP-binding protein 1; Short=DRG-1; Short=xDRG gi|433422|dbj|BAA02978.1| GTP-binding protein DRG [Xenopus laevis] Length = 367 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+V+ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVVRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K+ +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNKQPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|294887445|ref|XP_002772113.1| GTP-binding protein, putative [Perkinsus marinus ATCC 50983] gi|239876051|gb|EER03929.1| GTP-binding protein, putative [Perkinsus marinus ATCC 50983] Length = 394 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILA-------- 211 +G++GLPN GKST +T+ ++PF T+ P+ +V + +++ A Sbjct: 24 MGLVGLPNVGKSTTFNVLTKCSIPAENFPFCTIDPHEAVVNVPDARMDWLSATFKPKSTI 83 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++ NAH+G G+G+ FL + + + H+ A + Sbjct: 84 AAVLRIWDIAGLVPNAHEGEGLGNAFLSNIQSVDGIYHVCRAFTD 128 >gi|167523900|ref|XP_001746286.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775048|gb|EDQ88673.1| predicted protein [Monosiga brevicollis MX1] Length = 364 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 42/72 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L S+T+ + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVVMIGFPSVGKSTLLTSMTKTESNSASYEFTTLTCIPGVLEYSGSRIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFL 231 A QG G G + + Sbjct: 123 AAQGKGRGKQVI 134 >gi|296447799|ref|ZP_06889713.1| GTP-binding protein YchF [Methylosinus trichosporium OB3b] gi|296254718|gb|EFH01831.1| GTP-binding protein YchF [Methylosinus trichosporium OB3b] Length = 365 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A A + A+YPF T+ PN+G V G K+ I Sbjct: 6 GIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGEVAVPDPRLDALAEVAGSKQII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+++ A +G G+G++FL + + H+V E+ Sbjct: 66 PTRLTFVDIAGLVRGASKGEGLGNQFLANIRECDAVAHVVRCFED 110 >gi|292657044|ref|YP_003536941.1| GTP-binding protein [Haloferax volcanii DS2] gi|291372509|gb|ADE04736.1| GTP-binding protein [Haloferax volcanii DS2] Length = 396 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 24/107 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG----IVKEGYKEF--------- 208 IG++G P+ GKS+F + T YPFTT+ P++G V+ EF Sbjct: 5 IGLVGKPSVGKSSFFNAATMNDVPEGAYPFTTIDPSIGEAYVRVECAAPEFDESCTPSVG 64 Query: 209 -----------ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 L D+ G+I AH+G G+G++FL VL+H+V Sbjct: 65 YCDHGMRFVPVKLVDVAGLIPGAHEGKGLGNQFLTDLNEADVLVHVV 111 >gi|294892778|ref|XP_002774229.1| GTP-binding protein, putative [Perkinsus marinus ATCC 50983] gi|239879446|gb|EER06045.1| GTP-binding protein, putative [Perkinsus marinus ATCC 50983] Length = 394 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILA-------- 211 +G++GLPN GKST +T+ ++PF T+ P+ +V + +++ A Sbjct: 24 MGLVGLPNVGKSTTFNVLTKCSIPAENFPFCTIDPHEAVVNVPDARMDWLSATFKPKNTI 83 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++ NAH+G G+G+ FL + + + H+ A + Sbjct: 84 AAVLRIWDIAGLVPNAHEGEGLGNAFLSNIQSVDGIYHVCRAFTD 128 >gi|28374024|pdb|1NI3|A Chain A, Structure Of The Schizosaccharomyces Pombe Ychf Gtpase Length = 392 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 33/160 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTLYPNLGIVK----------EGYKE-- 207 GI+G PN GKSTF ++T++ P A+YP+ T+ P V E YK Sbjct: 24 GIVGXPNVGKSTFFRAITKSVLGNP--ANYPYATIDPEEAKVAVPDERFDWLCEAYKPKS 81 Query: 208 -----FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQ 252 + DI G+ K A G G+G+ FL H + +V A ++ + Sbjct: 82 RVPAFLTVFDIAGLTKGASTGVGLGNAFLSHVRAVDAIYQVVRAFDDAEIIHVEGDVDPI 141 Query: 253 AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 I+DEL ++E +K + GL +I + ++TL K Sbjct: 142 RDLSIIVDELLIKDAEFVEK-HLEGLRKITSRGANTLEXK 180 >gi|88858476|ref|ZP_01133118.1| GTP-binding protein EngA [Pseudoalteromonas tunicata D2] gi|88820093|gb|EAR29906.1| GTP-binding protein EngA [Pseudoalteromonas tunicata D2] Length = 492 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 85/163 (52%), Gaps = 11/163 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST +TR++ +AD+P T G K EFI+ D G I + Sbjct: 5 IALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKYDEYEFIVVDTGG-IDGS 63 Query: 221 HQGAGI--GDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V++ +V A + AA Q I + L N++ K I +V Sbjct: 64 EEGIELEMAEQSLLAIEEADVVMFLVDA-RAGMTAADQAIANHLRKLNTQ--KSIFLVA- 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 ++ID +D+D+ + +LA G+V ++ ++ G G+ Q+LE Sbjct: 120 NKIDGLDADSSCAEFYQLA--LGEV-YQIAASHGRGVTQLLET 159 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 21/175 (12%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT + +E++L D G+ K Sbjct: 207 LAIIGRPNVGKSTLTNRILGEERVIVYDMPGTTRDSIYIPMTRNDQEYVLIDTAGVRKR- 265 Query: 221 HQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQCILDE-LSAYNSELRK-KI 273 + + + ++F LK E +V+L +V A E I D+ LS L + Sbjct: 266 KKVSDVAEKFSVIKTLKAIEDANVVLLVVDARE--------GISDQDLSLLGFALNSGRS 317 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 ++ +++ D +D R K EL + G + F S++ G G+ + E + + Sbjct: 318 LVIAVNKWDGLDEYVKTRIKTELDRRLGFIDFARIHFISALHGTGVGHLFESVDE 372 >gi|297592132|gb|ADI46916.1| DRG1m [Volvox carteri f. nagariensis] Length = 368 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L +T + A Y FTTL GIV+ + + D+PGII+ Sbjct: 65 ARVGFVGFPSVGKSTLLTKLTGTYSEAASYEFTTLTCIPGIVRYRGAKIQMLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I EL + L K++ + Sbjct: 125 AKDGKGRGRQVISTARTCNLILVVLDCLKPLTHK--RLIEHELEGFGIRLNKELPKISFR 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|221219192|gb|ACM08257.1| Developmentally-regulated GTP-binding protein 1 [Salmo salar] Length = 366 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 64 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I EL + L KK +G Sbjct: 124 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKLIEHELEGFGIRLNKKPPNIGFK 181 Query: 280 QID 282 + D Sbjct: 182 KKD 184 >gi|148284983|ref|YP_001249073.1| putative GTP-binding protein [Orientia tsutsugamushi str. Boryong] gi|146740422|emb|CAM80899.1| putative GTP-binding protein [Orientia tsutsugamushi str. Boryong] Length = 366 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 22/106 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGI-------------------VK 202 GI+GLPN GKST ++T + + +Y F T+ N+GI + Sbjct: 6 GIVGLPNVGKSTLFNALTATQAANVGNYSFCTIESNIGIAAVPDPRLPKLADIAGSQSII 65 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 Y +F+ DI G++K A G G+G++FL H ++H++ + Sbjct: 66 PTYVKFV--DIAGLVKGASSGEGLGNKFLSHIRDVDAIIHVLRCFD 109 >gi|258541471|ref|YP_003186904.1| GTP-dependent nucleic acid-binding protein EngD [Acetobacter pasteurianus IFO 3283-01] gi|256632549|dbj|BAH98524.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-01] gi|256635606|dbj|BAI01575.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-03] gi|256638661|dbj|BAI04623.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-07] gi|256641715|dbj|BAI07670.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-22] gi|256644770|dbj|BAI10718.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-26] gi|256647825|dbj|BAI13766.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-32] gi|256650878|dbj|BAI16812.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653869|dbj|BAI19796.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-12] Length = 364 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 18/108 (16%) Query: 161 DIGIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKST F A A + A+YPF T+ PN G V + Sbjct: 4 NCGIVGLPNVGKSTLFNALTATATAQAANYPFCTIEPNTGRVAVPDPRLDKLVEIGKSQR 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 E DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 64 EVPTSLEFVDIAGLVRGASKGEGLGNQFLANIREVDAIIHVLRCFEDD 111 >gi|294877064|ref|XP_002767889.1| GTP-binding protein, putative [Perkinsus marinus ATCC 50983] gi|239869838|gb|EER00607.1| GTP-binding protein, putative [Perkinsus marinus ATCC 50983] Length = 394 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILA-------- 211 +G++GLPN GKST +T+ ++PF T+ P+ +V + +++ A Sbjct: 24 MGLVGLPNVGKSTTFNVLTKCSIPAENFPFCTIDPHEAVVNVPDDRMDWLSATFKPKSTI 83 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ NAH+G G+G+ FL + + + H+ A ++ Sbjct: 84 AAVLRIWDIAGLVPNAHEGEGLGNAFLSNIQSVDGIYHVCRAFTDD 129 >gi|303287570|ref|XP_003063074.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455710|gb|EEH53013.1| predicted protein [Micromonas pusilla CCMP1545] Length = 369 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 50/87 (57%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +G++G P+ GKST L +T ++A Y FTTL G+++ + L D+PGII+ A Sbjct: 66 VGLVGFPSVGKSTLLNKLTGTFSEVAAYEFTTLTCIPGVIRYRGAKIQLLDLPGIIEGAK 125 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALE 248 G G G + + +V++ ++ AL+ Sbjct: 126 DGKGRGRQVISTARTCNVIVIVLDALK 152 >gi|119580378|gb|EAW59974.1| developmentally regulated GTP binding protein 1, isoform CRA_a [Homo sapiens] Length = 240 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|329115064|ref|ZP_08243819.1| GTP-dependent nucleic acid-binding protein EngD [Acetobacter pomorum DM001] gi|326695507|gb|EGE47193.1| GTP-dependent nucleic acid-binding protein EngD [Acetobacter pomorum DM001] Length = 364 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 18/108 (16%) Query: 161 DIGIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKST F A A + A+YPF T+ PN G V + Sbjct: 4 NCGIVGLPNVGKSTLFNALTATATAQAANYPFCTIEPNTGRVAVPDPRLDKLVEIGKSQR 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 E DI G+++ A +G G+G++FL + ++H++ E++ Sbjct: 64 EVPTSLEFVDIAGLVRGASKGEGLGNQFLANIREVDAIIHVLRCFEDD 111 >gi|294951747|ref|XP_002787114.1| GTP-binding protein, putative [Perkinsus marinus ATCC 50983] gi|239901746|gb|EER18910.1| GTP-binding protein, putative [Perkinsus marinus ATCC 50983] Length = 394 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILA-------- 211 +G++GLPN GKST +T+ ++PF T+ P+ +V + +++ A Sbjct: 24 MGLVGLPNVGKSTTFNVLTKCSIPAENFPFCTIDPHEAVVNVPDDRMDWLSATFKPKSTI 83 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G++ NAH+G G+G+ FL + + + H+ A ++ Sbjct: 84 AAVLRIWDIAGLVPNAHEGEGLGNAFLSNIQSVDGIYHVCRAFTDD 129 >gi|197128815|gb|ACH45313.1| putative developmentally regulated GTP binding protein 1 [Taeniopygia guttata] Length = 255 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|170085425|ref|XP_001873936.1| predicted protein [Laccaria bicolor S238N-H82] gi|164651488|gb|EDR15728.1| predicted protein [Laccaria bicolor S238N-H82] Length = 387 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 49/93 (52%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+ T + A Y FTTL G+++ L D+PGI++ Sbjct: 63 ARVALIGFPSVGKSTLLSKTTHTASEAAAYEFTTLTAIPGVIEYKGARIQLLDLPGIVEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + + ++L ++ A + Q Sbjct: 123 ASQGRGRGRQVVSTAKTADLILIMLDATKSEEQ 155 >gi|226495669|ref|NP_001149773.1| developmentally-regulated GTP-binding protein 1 [Zea mays] gi|195633785|gb|ACG36737.1| developmentally-regulated GTP-binding protein 1 [Zea mays] Length = 368 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 50/89 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G++G P+ GKST L +T ++A Y FTTL G++ + L D+PGII+ Sbjct: 65 ARVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVIMYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +V+L ++ A++ Sbjct: 125 AKDGKGRGRQVISTARTCNVILIVLDAIK 153 >gi|50419273|ref|XP_458160.1| DEHA2C10978p [Debaryomyces hansenii CBS767] gi|49653826|emb|CAG86231.1| DEHA2C10978p [Debaryomyces hansenii] Length = 367 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 47/86 (54%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A IG +G P+ GKST L+ +T + A Y FTTL GI+K + + D+PGII+ Sbjct: 63 VATIGFVGFPSVGKSTLLSKLTGTHSEAAAYEFTTLTTVPGIIKYKGAKLQMLDLPGIIE 122 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + ++L ++ Sbjct: 123 GAKDGKGRGKQVIAVARSVNLLFLVL 148 >gi|92117387|ref|YP_577116.1| GTP-binding protein, HSR1-related [Nitrobacter hamburgensis X14] gi|91800281|gb|ABE62656.1| GTP-binding protein HflX [Nitrobacter hamburgensis X14] Length = 444 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 8/175 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST +TRA+ + AD F TL P L + + + +L+D G I N Sbjct: 213 VALVGYTNAGKSTLFNRLTRAEVQAADMLFATLDPTLRALALPHGGKAMLSDTVGFISNL 272 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIV 276 Q L+ V+LH+ E+ +A + +L +L + +E+ Sbjct: 273 PTQLVAAFRATLEEVMEADVILHVRDISHEDAEAQQHDVEAVLRQLGIDPGHGARILEV- 331 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 ++ID D+D +N + +VP F S+ TG G+ +L + D++ + R Sbjct: 332 -WNKIDRFDADQRENLENIAVRRSAEVPCFLVSAETGEGLDTLLAAIEDRLAATR 385 >gi|254565587|ref|XP_002489904.1| Member of the DRG family of GTP-binding proteins [Pichia pastoris GS115] gi|238029700|emb|CAY67623.1| Member of the DRG family of GTP-binding proteins [Pichia pastoris GS115] gi|328350315|emb|CCA36715.1| Developmentally-regulated GTP-binding protein 1 [Pichia pastoris CBS 7435] Length = 367 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 1/86 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A IG +G P+ GKST L +T ++A Y FTTL GI+K + + D+PGII+ Sbjct: 63 VASIGFVGFPSIGKSTLLNKLTGVASEVAAYEFTTLTSVPGIIKYKGAKIQMIDLPGIIE 122 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT ++ IV Sbjct: 123 GAKDGKGRGKQVIA-VARTCNMIFIV 147 >gi|159477086|ref|XP_001696642.1| GTP binding protein [Chlamydomonas reinhardtii] gi|158282867|gb|EDP08619.1| GTP binding protein [Chlamydomonas reinhardtii] gi|294845978|gb|ADF43137.1| DRG1p [Chlamydomonas reinhardtii] gi|294846022|gb|ADF43180.1| DRG1m [Chlamydomonas reinhardtii] Length = 355 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L +T + A+Y FTTL GIV+ + + D+PGII+ Sbjct: 52 ARVGFVGFPSVGKSTLLTKLTGTFSEAANYEFTTLTCIPGIVRYRGAKIQMLDLPGIIEG 111 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + +++L ++ L+ + I EL + L KK Sbjct: 112 AKDGKGRGRQVISTARTCNLILIVLDCLKPLTHK--RLIEHELEGFGIRLNKK 162 >gi|290981644|ref|XP_002673540.1| predicted protein [Naegleria gruberi] gi|284087124|gb|EFC40796.1| predicted protein [Naegleria gruberi] Length = 354 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 38/173 (21%) Query: 167 LPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGI-------------------VKEGYK 206 +PN GKST ++T + K + A++PF T+ PN+G+ + Y Sbjct: 1 MPNVGKSTLFNALTESTKAEAANFPFCTIEPNVGVCTVPDERLELLAERAKTKKIVPTYI 60 Query: 207 EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE-NVQAAYQCI--LDELS 263 E I DI G+IK A +G G+G++FL H + + +V E+ N+ + + ++ Sbjct: 61 EVI--DIAGLIKGAAEGKGLGNKFLSHIRGVNCIAQMVRCFEDVNITHVENSVDPVRDVQ 118 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDT------LARKKNELATQCGQVPFEFSSI 310 SEL LS +D V+ + ++ K +L +C + E +S+ Sbjct: 119 IIESELM-------LSDLDVVERNMKRKEIQASKDKMDLLKKCHETLIEENSL 164 >gi|50547849|ref|XP_501394.1| YALI0C03355p [Yarrowia lipolytica] gi|49647261|emb|CAG81693.1| YALI0C03355p [Yarrowia lipolytica] Length = 394 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 34/172 (19%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTLYPNLGIVK----------EGYK--- 206 GI+GL N GKSTF ++TR P A+YPF T+ P V E YK Sbjct: 24 GIVGLANVGKSTFFQAITRCPLGNP--ANYPFATIEPEEARVTVPSARFDKLCEMYKPAS 81 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQ 252 + DI G+ K AH G G+G+ FL + + +V ++ + Sbjct: 82 KVPAHITVYDIAGLTKGAHAGEGLGNAFLSNIRAVDAIFQVVRCFDDAEIIHIEGDVDPV 141 Query: 253 AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL-ARKKNELATQCGQV 303 Q I DEL + E KK + G+ +I ++ ++K E A C ++ Sbjct: 142 RDLQIIKDELRLKDIEFAKK-HLEGVEKIVKRGGQSMEVKQKKEEAATCEKI 192 >gi|297717828|gb|ADI50057.1| GTP-binding protein YchF [Candidatus Odyssella thessalonicensis L13] Length = 366 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 18/108 (16%) Query: 161 DIGIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLG-----------IVKEGYKEF 208 + GI+GLPN GKST F A A + A+YPF T+ PN G + K + Sbjct: 4 NCGIVGLPNVGKSTLFNALTATAAAEAANYPFCTIEPNTGRVGVPDPRLYELAKIAQSQK 63 Query: 209 IL------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 I+ DI G+++ A +G G+G++FL H ++H++ E++ Sbjct: 64 IIPTQLEFVDIAGLVRGASKGEGLGNQFLGHIRSVDAIIHVLRCFEDD 111 >gi|302755740|ref|XP_002961294.1| hypothetical protein SELMODRAFT_75620 [Selaginella moellendorffii] gi|302803013|ref|XP_002983260.1| hypothetical protein SELMODRAFT_118203 [Selaginella moellendorffii] gi|300148945|gb|EFJ15602.1| hypothetical protein SELMODRAFT_118203 [Selaginella moellendorffii] gi|300172233|gb|EFJ38833.1| hypothetical protein SELMODRAFT_75620 [Selaginella moellendorffii] Length = 399 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 2/115 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L +T + A Y FTTL GI+ + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIILYNDAKIQLLDLPGIIEGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +G G G + + + + ++L ++ A + Q + EL A L K+ ++ Sbjct: 125 EGKGRGRQVIAVAKSSDLVLMVLDA--SKSEGHRQILTRELEAVGLRLNKRPPLI 177 >gi|146412303|ref|XP_001482123.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC 6260] gi|146393630|gb|EDK41788.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC 6260] Length = 367 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 47/86 (54%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A IG +G P+ GKST L+ +T + A Y FTTL GI+K + + D+PGII+ Sbjct: 63 VATIGFVGFPSVGKSTLLSKLTGTHSEAAAYEFTTLTTVPGIIKYKGAKLQMLDLPGIIE 122 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + ++L ++ Sbjct: 123 GAKDGKGRGKQVIAVARSVNLLFLVL 148 >gi|218200070|gb|EEC82497.1| hypothetical protein OsI_26957 [Oryza sativa Indica Group] gi|222637504|gb|EEE67636.1| hypothetical protein OsJ_25212 [Oryza sativa Japonica Group] Length = 379 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 50/89 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G++G P+ GKST L +T ++A Y FTTL G++ + L D+PGII+ Sbjct: 76 ARVGLVGFPSVGKSTLLNKLTGTFSEVAAYEFTTLTCIPGVIMYKGAKIQLLDLPGIIEG 135 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +V+L ++ A++ Sbjct: 136 AKDGKGRGRQVISTARTCNVILIVLDAIK 164 >gi|238764693|ref|ZP_04625637.1| GTP-binding protein hflX [Yersinia kristensenii ATCC 33638] gi|238697089|gb|EEP89862.1| GTP-binding protein hflX [Yersinia kristensenii ATCC 33638] Length = 434 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 13/173 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I + ++G NAGKS+ +T A AD F TL P L I + +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSSLFNKITAADVYAADQLFATLDPTLRRITVADVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENV---QAAYQCILDELSAYNSELRKKI 273 ++ H L+ T + +LLHI+ A + V AA +L E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQASLLLHIIDAADPRVAENMAAVDSVLAEIEADEIP----- 311 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D +NE + V S+ TG GIP + + L +++ Sbjct: 312 TLLVMNKIDLLDDFIPRIDRNE---ENLPVRVWLSAQTGAGIPLLFQALTERL 361 >gi|145534418|ref|XP_001452953.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124420653|emb|CAK85556.1| unnamed protein product [Paramecium tetraurelia] Length = 371 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-----------------EG 204 +GI+G+ N GKS+ +++ ++PF T+ PN +VK + Sbjct: 13 MGIVGMANVGKSSTFNMLSKQSVPAENFPFCTIDPNQAVVKVPDPRFDYLCQIFKPKSQV 72 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + + DI G++K A +G G+G+ FL H + L +V A E+ Sbjct: 73 FSTLSIIDIAGLVKGASEGYGLGNEFLAHIQAVDGLYQVVRAFEK 117 >gi|256371342|ref|YP_003109166.1| GTP-binding protein YchF [Acidimicrobium ferrooxidans DSM 10331] gi|256007926|gb|ACU53493.1| GTP-binding protein YchF [Acidimicrobium ferrooxidans DSM 10331] Length = 357 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTT--------LYPN-----LGIV----KEG 204 +G++GL NAGKST ++T +A +PFTT + P+ L + K Sbjct: 4 LGLVGLANAGKSTLFNALTGLDTPVAPHPFTTTDTTIAEAVVPDERVDALAAIHHSRKLV 63 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 Y LADI G+ + QGAG+G+RFL +L+++ A ++ Sbjct: 64 YAHMQLADIAGLTAGSSQGAGLGNRFLGQLREADAILYVLRAFHDD 109 >gi|2058456|gb|AAB53256.1| GTP-binding protein [Arabidopsis thaliana] gi|2345150|gb|AAB67830.1| developmentally regulated GTP binding protein [Arabidopsis thaliana] Length = 399 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 2/110 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L +T + A Y FTTL G++ + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYNDTKIQLLDLPGIIEGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 +G G G + + + + ++L ++ A + Q + EL A L K Sbjct: 125 EGKGRGRQVIAVAKSSDLVLMVLDA--SKSEGHRQILTKELEAVGLRLNK 172 >gi|332018038|gb|EGI58663.1| GTP-binding protein 128up [Acromyrmex echinatior] Length = 367 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 1/85 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A+Y FTTL G +K + L D+PGII+ Sbjct: 64 ARIGFVGFPSVGKSTLLSTLAGVYSEVAEYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT L+ IV Sbjct: 124 AKDGKGRGRQVIA-VARTCSLIFIV 147 >gi|15220113|ref|NP_173190.1| ATDRG1 (ARABIDOPSIS THALIANA DEVELOPMENTALLY REGULATED G-PROTEIN 1); GTP binding / GTPase [Arabidopsis thaliana] gi|145323932|ref|NP_001077555.1| ATDRG1 (ARABIDOPSIS THALIANA DEVELOPMENTALLY REGULATED G-PROTEIN 1); GTP binding / GTPase [Arabidopsis thaliana] gi|9665129|gb|AAF97313.1|AC007843_16 GTP binding protein [Arabidopsis thaliana] gi|59958304|gb|AAX12862.1| At1g17470 [Arabidopsis thaliana] gi|332191474|gb|AEE29595.1| developmentally regulated G-protein 1 [Arabidopsis thaliana] gi|332191475|gb|AEE29596.1| developmentally regulated G-protein 1 [Arabidopsis thaliana] Length = 399 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 2/110 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L +T + A Y FTTL G++ + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYNDTKIQLLDLPGIIEGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 +G G G + + + + ++L ++ A + Q + EL A L K Sbjct: 125 EGKGRGRQVIAVAKSSDLVLMVLDA--SKSEGHRQILTKELEAVGLRLNK 172 >gi|307208178|gb|EFN85652.1| GTP-binding protein 128up [Harpegnathos saltator] Length = 367 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 1/85 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A+Y FTTL G +K + L D+PGII+ Sbjct: 64 ARIGFVGFPSVGKSTLLSTLAGVYSEVAEYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT L+ IV Sbjct: 124 AKDGKGRGRQVIA-VARTCSLIFIV 147 >gi|164656971|ref|XP_001729612.1| hypothetical protein MGL_3156 [Malassezia globosa CBS 7966] gi|159103505|gb|EDP42398.1| hypothetical protein MGL_3156 [Malassezia globosa CBS 7966] Length = 367 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 50/87 (57%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+S+T + + A Y +TTL G+++ L D+PGII+ Sbjct: 63 ARVVLIGFPSVGKSTLLSSITETESETAAYEYTTLTAIPGVLEYEGARIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 A QG G G + + + +++ ++ A Sbjct: 123 AAQGRGRGRQVVSVAKTADLVMMMLDA 149 >gi|307190203|gb|EFN74318.1| GTP-binding protein 128up [Camponotus floridanus] Length = 367 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 1/85 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A+Y FTTL G +K + L D+PGII+ Sbjct: 64 ARIGFVGFPSVGKSTLLSTLAGVYSEVAEYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT L+ IV Sbjct: 124 AKDGKGRGRQVIA-VARTCSLIFIV 147 >gi|255089937|ref|XP_002506890.1| predicted protein [Micromonas sp. RCC299] gi|226522163|gb|ACO68148.1| predicted protein [Micromonas sp. RCC299] Length = 370 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 49/87 (56%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +G++G P+ GKST L +T ++A Y FTTL G+++ + L D+PGII+ A Sbjct: 67 VGMVGFPSVGKSTLLNKLTGTFSEVAAYEFTTLTCIPGVIRYRGAKIQLLDLPGIIEGAK 126 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALE 248 G G G + + V++ ++ AL+ Sbjct: 127 DGKGRGRQVISTARTCDVIVIVLDALK 153 >gi|322803090|gb|EFZ23178.1| hypothetical protein SINV_08023 [Solenopsis invicta] Length = 367 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 1/85 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A+Y FTTL G +K + L D+PGII+ Sbjct: 64 ARIGFVGFPSVGKSTLLSTLAGVYSEVAEYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT L+ IV Sbjct: 124 AKDGKGRGRQVIA-VARTCSLIFIV 147 >gi|268592879|ref|ZP_06127100.1| GTP-binding protein HflX [Providencia rettgeri DSM 1131] gi|291311669|gb|EFE52122.1| GTP-binding protein HflX [Providencia rettgeri DSM 1131] Length = 426 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 19/176 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKS+ +T A AD F TL P L + E +LAD G I Sbjct: 197 IPTISLVGYTNAGKSSLFNRMTAADVYAADQLFATLDPTLRRIDVEDVGVVVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T +LLH++ A L+EN+ A + +L+E+ A Sbjct: 257 RHLPHDLVAAFKATLQETREATLLLHVIDAADNRLDENIHAV-ESVLEEIEAD------- 308 Query: 273 IEIVGLSQIDTVD--SDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI L ++ VD D + R + + +V S+ TG GIP +L+ L +++ Sbjct: 309 -EIPTLLVMNKVDMLEDFVPRIDRDEDNKPVRV--WVSAQTGDGIPLLLQALTERL 361 >gi|73995093|ref|XP_866345.1| PREDICTED: similar to developmentally regulated GTP binding protein 1 isoform 3 [Canis familiaris] Length = 376 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|326929930|ref|XP_003211106.1| PREDICTED: developmentally-regulated GTP-binding protein 1-like [Meleagris gallopavo] Length = 327 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 25 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 84 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 85 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 142 Query: 280 QID 282 + D Sbjct: 143 KKD 145 >gi|145529411|ref|XP_001450494.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124418105|emb|CAK83097.1| unnamed protein product [Paramecium tetraurelia] Length = 371 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-----------------EG 204 +GI+G+ N GKS+ +++ ++PF T+ PN +VK + Sbjct: 13 MGIVGMANVGKSSTFNMLSKQSVPAENFPFCTIDPNQAVVKVPDPRFDYLCQIFKPKSQV 72 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + + DI G++K A +G G+G+ FL H + L +V A E+ Sbjct: 73 FSTLSIIDIAGLVKGASEGYGLGNEFLAHIQAVDGLYQVVRAFEK 117 >gi|330506771|ref|YP_004383199.1| GTP-binding/TGS domain-containing protein [Methanosaeta concilii GP-6] gi|328927579|gb|AEB67381.1| GTP-binding/TGS domain protein [Methanosaeta concilii GP-6] Length = 396 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 50/94 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKS+ L +T +K ++A Y FTTL G++K E + D+PGIIK Sbjct: 93 ATVALVGFPSVGKSSLLNYLTGSKSEVAAYQFTTLEVIPGVMKHKGAEIQILDMPGIIKG 152 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA 253 A +G G G + ++L + N++ Sbjct: 153 AARGKGRGREVITAARAADMILLLGDVFNYNLKV 186 >gi|159483429|ref|XP_001699763.1| flagellar associated protein [Chlamydomonas reinhardtii] gi|158281705|gb|EDP07459.1| flagellar associated protein [Chlamydomonas reinhardtii] Length = 391 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 17/119 (14%) Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------ 201 +E+ + + K IG++G+PN GKST +T+ ++PF T+ PN V Sbjct: 10 KERPLLGRFKSNLKIGLVGMPNVGKSTLFNLLTKVGVPAENFPFCTIDPNNARVNVPDDR 69 Query: 202 ----------KEGYKEFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 K F+ + DI G+++ A G G+G+ FL H + H+ A E+ Sbjct: 70 FNWLCSVYKPKSSVPAFLDVVDIAGLVRGAATGEGLGNAFLSHIAAVDGIFHVCRAFED 128 >gi|298675659|ref|YP_003727409.1| nucleolar GTP-binding-1 domain-containing protein [Methanohalobium evestigatum Z-7303] gi|298288647|gb|ADI74613.1| Nucleolar GTP-binding-1 domain protein [Methanohalobium evestigatum Z-7303] Length = 328 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 19/169 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+A T+A+P++A YPFTT ++G + + D PG++ Sbjct: 163 IVVAGYPNTGKSSFVALATKARPEVAIYPFTTKGISIGHFTRDNIRYQVIDTPGLLDRP- 221 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC--ILDELSAYNSELRKKIEIVGLS 279 + DR + L H+ S L V A+ C +D+ E++++ ++ + Sbjct: 222 ----MSDRNDIELQAITALKHLGSVLLYLVDASETCGYTVDDQKRLYEEIKQQFDLPMFA 277 Query: 280 QIDTVDSDTLARKKNELA--TQCGQVPFEFSSITGHGIPQILECLHDKI 326 K++L + V E S++T G+ +++ L D I Sbjct: 278 ----------VSNKSDLPEFQELDFVDMEMSTVTSEGVEEVVNNLVDMI 316 >gi|115473497|ref|NP_001060347.1| Os07g0627800 [Oryza sativa Japonica Group] gi|33146858|dbj|BAC79856.1| putative GTP-binding protein DRG [Oryza sativa Japonica Group] gi|113611883|dbj|BAF22261.1| Os07g0627800 [Oryza sativa Japonica Group] gi|215694744|dbj|BAG89935.1| unnamed protein product [Oryza sativa Japonica Group] Length = 369 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 50/89 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G++G P+ GKST L +T ++A Y FTTL G++ + L D+PGII+ Sbjct: 66 ARVGLVGFPSVGKSTLLNKLTGTFSEVAAYEFTTLTCIPGVIMYKGAKIQLLDLPGIIEG 125 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +V+L ++ A++ Sbjct: 126 AKDGKGRGRQVISTARTCNVILIVLDAIK 154 >gi|323496873|ref|ZP_08101905.1| GTPase HflX [Vibrio sinaloensis DSM 21326] gi|323318059|gb|EGA71038.1| GTPase HflX [Vibrio sinaloensis DSM 21326] Length = 429 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 9/173 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L + ILAD G I Sbjct: 197 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIDLSDVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ H L+ T+ +LLH+V A +E + Q + D L+ ++ + +V Sbjct: 257 RHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAVHDVLAEIEAD--EIPALV 314 Query: 277 GLSQIDTVD-SDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 +++ID +D + + +E Q V S++ G GI + + L +++ S Sbjct: 315 VMNKIDNLDGQNPRIERDDEGIPQSVWV----SAMEGKGIELLFDALTERLAS 363 >gi|225710636|gb|ACO11164.1| GTP-binding protein 128up [Caligus rogercresseyi] Length = 367 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG IG P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 64 ARIGFIGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + RT L IV + + +Q + I EL + L KK Sbjct: 124 AKDGKGRGRQVIA-VARTASLTFIVLDVLKPLQHK-RLIEKELEGFGIRLNKK 174 >gi|85715518|ref|ZP_01046499.1| GTP-binding protein, [Nitrobacter sp. Nb-311A] gi|85697713|gb|EAQ35589.1| GTP-binding protein, [Nitrobacter sp. Nb-311A] Length = 457 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 8/175 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST +TRA + AD F TL P L + + + +L+D G I N Sbjct: 226 VALVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRSLALPHGGKAMLSDTVGFISNL 285 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENV---QAAYQCILDELSAYNSELRKKIEIV 276 Q L+ ++LH+ E+ Q + +L +L + +E+ Sbjct: 286 PTQLVAAFRATLEEVMEADIILHVRDISHEDTEPQQHDVEAVLHQLGIERGGAARILEV- 344 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 ++ID D D +N +A + VP F S+ TG G+ +L + D++ + R Sbjct: 345 -WNKIDRFDVDQRKELENIVARRSTDVPCFLVSAETGEGVETLLAAIEDRLAATR 398 >gi|153949543|ref|YP_001402606.1| GTPase HflX [Yersinia pseudotuberculosis IP 31758] gi|152961038|gb|ABS48499.1| GTP-binding protein HflX [Yersinia pseudotuberculosis IP 31758] Length = 428 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 17/175 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKS+ +T A AD F TL P L + + +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSSLFNKITAADVYAADQLFATLDPTLRRINVADVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENV---QAAYQCILDELSAYNSELRKKI 273 ++ H L+ T + +LLHI+ A++ V AA +L E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQASLLLHIIDAVDPRVAENMAAVDTVLAEIEADEIP----- 311 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQILECLHDKI 326 ++ +++ID +D +NE +P S+ TG GIP + + L +++ Sbjct: 312 TLLVMNKIDLLDDFVPRIDRNE-----DNLPVRVWLSAQTGAGIPLLFQALTERL 361 >gi|220919571|ref|YP_002494875.1| GTP-binding protein YchF [Anaeromyxobacter dehalogenans 2CP-1] gi|219957425|gb|ACL67809.1| GTP-binding protein YchF [Anaeromyxobacter dehalogenans 2CP-1] Length = 370 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 IGI+GLPN GKST F A + A+ A+YPF T+ PN+G+V K Sbjct: 5 IGIVGLPNVGKSTLFNALLGAAQAAAANYPFCTIEPNVGVVPVPDARLDALSALFKPKKT 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++ A +G G+G++FL + + H++ E+ Sbjct: 65 TPTTLEFVDIAGLVAGASKGEGLGNQFLANIREVDAIAHVLRCFED 110 >gi|297844694|ref|XP_002890228.1| developmentally regulated G-protein 1 [Arabidopsis lyrata subsp. lyrata] gi|297336070|gb|EFH66487.1| developmentally regulated G-protein 1 [Arabidopsis lyrata subsp. lyrata] Length = 400 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 1/110 (0%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L +T + A Y FTTL G++ + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYNDTKIQLLDLPGIIEGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 +G G G + + + + ++L ++ A + + + Q + EL A L K Sbjct: 125 EGKGRGRQVIAVAKSSDLVLMVLDASKVS-EGHRQILTKELEAVGLRLNK 173 >gi|86160752|ref|YP_467537.1| GTP-dependent nucleic acid-binding protein EngD [Anaeromyxobacter dehalogenans 2CP-C] gi|197124853|ref|YP_002136804.1| GTP-dependent nucleic acid-binding protein EngD [Anaeromyxobacter sp. K] gi|85777263|gb|ABC84100.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans 2CP-C] gi|196174702|gb|ACG75675.1| GTP-binding protein YchF [Anaeromyxobacter sp. K] Length = 370 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 IGI+GLPN GKST F A + A+ A+YPF T+ PN+G+V K Sbjct: 5 IGIVGLPNVGKSTLFNALLGAAQAAAANYPFCTIEPNVGVVPVPDARLDALSALFKPKKT 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++ A +G G+G++FL + + H++ E+ Sbjct: 65 TPTTLEFVDIAGLVAGASKGEGLGNQFLANIREVDAIAHVLRCFED 110 >gi|242046388|ref|XP_002461065.1| hypothetical protein SORBIDRAFT_02g040010 [Sorghum bicolor] gi|241924442|gb|EER97586.1| hypothetical protein SORBIDRAFT_02g040010 [Sorghum bicolor] Length = 369 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 50/89 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G++G P+ GKST L +T ++A Y FTTL G++ + L D+PGII+ Sbjct: 66 ARVGLVGFPSVGKSTLLNKLTGTFSEVAAYEFTTLTCIPGVIMYKGAKIQLLDLPGIIEG 125 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +V+L ++ A++ Sbjct: 126 AKDGKGRGRQVISTARTCNVILIVLDAIK 154 >gi|47223702|emb|CAF99311.1| unnamed protein product [Tetraodon nigroviridis] Length = 366 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+V+ + L D+PGII+ Sbjct: 64 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVVRYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I EL + L K+ +G Sbjct: 124 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKLIEHELEGFGIRLNKQPPNIGFK 181 Query: 280 QID 282 + D Sbjct: 182 KKD 184 >gi|123440761|ref|YP_001004753.1| putative GTPase HflX [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332160023|ref|YP_004296600.1| putative GTPase HflX [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|122087722|emb|CAL10507.1| GTP-binding protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318607419|emb|CBY28917.1| GTP-binding protein HflX [Yersinia enterocolitica subsp. palearctica Y11] gi|325664253|gb|ADZ40897.1| putative GTPase HflX [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862094|emb|CBX72260.1| GTP-binding protein hflX [Yersinia enterocolitica W22703] Length = 433 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 13/173 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKS+ +T A AD F TL P L + + +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSSLFNKITAADVYAADQLFATLDPTLRRINVADVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENV---QAAYQCILDELSAYNSELRKKI 273 ++ H L+ T + +LLHI+ A + V AA +L E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQASLLLHIIDAADPRVAENMAAVDSVLAEIEADEIP----- 311 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D +NE + V S+ TG GIP + + L +++ Sbjct: 312 TLLVMNKIDLLDDFVPRIDRNE---ENLPVRVWLSAQTGAGIPLLFQALTERL 361 >gi|261335792|emb|CBH18786.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 891 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 38/152 (25%) Query: 162 IGIIGLPNAGKSTFLASVTRA-----KPKIADYPFTTLYPNLGI---------------- 200 IG+IG P+AGKSTF +VT ++A +PFTT+ PN+G Sbjct: 447 IGLIGKPSAGKSTFYNAVTNPDNESKAARVAAFPFTTIEPNVGCGFGPIFCPCSLSQPSP 506 Query: 201 -------VKEGYK----------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHI 243 K G+ ++ D+ G+++ A++G G G+RFL VL+HI Sbjct: 507 SSTGQCGAKYGHATTFGAPHRRHPIVVKDVAGLVQGAYRGRGKGNRFLNDLCDADVLVHI 566 Query: 244 VSALEENVQAAYQCILDELSAYNSELRKKIEI 275 V C E S ++ + + E+ Sbjct: 567 VDGAGATYADGSACAPGEGSTFDDIMWVRGEL 598 >gi|260940699|ref|XP_002614649.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] gi|238851835|gb|EEQ41299.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] Length = 385 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 15/160 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A IG +G P+ GKST L+ +T + A Y FTTL G++K + + D+PGII+ Sbjct: 81 VATIGFVGFPSVGKSTLLSKLTGTHSEAAAYEFTTLTTVPGVIKYKGAKIQMLDLPGIIE 140 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS-------------AY 265 A G G G + + R+ LL +V + + +Q Q I EL Sbjct: 141 GAKDGKGRGKQVIA-VARSVNLLFLVLDVNKPLQHK-QIIEKELEGVGIRINKEPPNIVI 198 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 N + R I I S + +D+D + +E + F Sbjct: 199 NKKERGGINITTTSPLTHLDNDEIRAVMSEYKINSANIAF 238 >gi|193713712|ref|XP_001952048.1| PREDICTED: probable nucleolar GTP-binding protein 1-like [Acyrthosiphon pisum] Length = 645 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 14/181 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+FL +TRA ++ Y FTT +G Y + + D PG++ + Sbjct: 173 LCGFPNVGKSSFLNKITRADVEVHSYAFTTKSLYVGHTDYKYLRWQVVDTPGVLDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + +R + + L H+ +A+ + + QC I +++ Y S K +V Sbjct: 230 --LEERNVIEMQAVTALAHLRAAILYFIDVSEQCGHSIAEQVKLYESIKPLFTNKPLLVV 287 Query: 278 LSQIDTVDSDTLARKKNELAT--QCGQVP-FEFSSITGHGIPQILECLHDKIFSIRGENE 334 +++D D L+ E + + VP S++T G+ ++ + D + + R EN+ Sbjct: 288 CNKVDVTPMDQLSEAGREALSIFEKNNVPLLSMSAVTDEGVMEVKQQACDTLLAYRIENK 347 Query: 335 F 335 Sbjct: 348 I 348 >gi|153007321|ref|YP_001381646.1| GTP-dependent nucleic acid-binding protein EngD [Anaeromyxobacter sp. Fw109-5] gi|152030894|gb|ABS28662.1| GTP-binding protein YchF [Anaeromyxobacter sp. Fw109-5] Length = 370 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------------KE 203 IGI+GLPN GKST F A + A+ A+YPF T+ PN+G+V K Sbjct: 5 IGIVGLPNVGKSTLFNALLGAAQAAAANYPFCTIEPNVGVVPVPDRRLERLAALFKPKKT 64 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G++ A +G G+G++FL + + + H++ E+ Sbjct: 65 TPTTLEFVDIAGLVAGASKGEGLGNQFLGNIRQVDAIAHVLRCFED 110 >gi|323491083|ref|ZP_08096274.1| GTPase HflX [Vibrio brasiliensis LMG 20546] gi|323314663|gb|EGA67736.1| GTPase HflX [Vibrio brasiliensis LMG 20546] Length = 429 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 19/178 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +T A AD F TL P L ++ ILAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNRITAAGVYAADQLFATLDPTLRKIELNDVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T+ +LLH+V A EN+QA ++ +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETQEADILLHVVDASDDRFRENIQAVHE-VLEEIDAH------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFS 328 E+ L ++ +D+ L +K + VP S++ G G + E L +++ S Sbjct: 309 -EVPSLLVMNKIDN--LEDQKPRIERDEEGVPRAVWVSAMEGIGTELLFEALKERLAS 363 >gi|54310429|ref|YP_131449.1| putative GTPase HflX [Photobacterium profundum SS9] gi|46914870|emb|CAG21647.1| putative GTP-binding protein HflX [Photobacterium profundum SS9] Length = 429 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I ++G NAGKST +T A +AD F TL P L I ILAD G I Sbjct: 197 IPTISLVGYTNAGKSTLFNRITDAGVYVADQLFATLDPTLRKIDVADVGTAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKI 273 ++ H LK T+ +LLH+V A +E + A +LDE+ A + Sbjct: 257 RHLPHDLVAAFKATLKETQEATLLLHVVDASDERFRENMDAVHLVLDEIDAGDVP----- 311 Query: 274 EIVGLSQIDTVD-SDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++ + + +C V S++ G GI + + L +++ Sbjct: 312 RLIVMNKIDCLDGAEPRIERDEDGLPRCVWV----SAMEGIGIDLLFQALTERL 361 >gi|37904742|gb|AAP57207.1| developmentally regulated GTP-binding protein 1 [Danio rerio] Length = 366 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 64 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I EL + L K+ +G Sbjct: 124 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKLIEHELEGFGIRLNKQPPNIGFK 181 Query: 280 QID 282 + D Sbjct: 182 KKD 184 >gi|262401560|ref|ZP_06078127.1| GTP-binding protein HflX [Vibrio sp. RC586] gi|262352275|gb|EEZ01404.1| GTP-binding protein HflX [Vibrio sp. RC586] Length = 429 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 19/178 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L + +LAD G I Sbjct: 197 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIDLADVGPAVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T+ +LLH+V A EN+QA + +L E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAV-ETVLQEIDAHEVPT--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFS 328 ++ +++ID ++ T ++++ VP S++ G GI + E L +++ S Sbjct: 313 --LLVMNKIDNLEEQTPRIERDDEG-----VPKIVWISAMQGTGIELLFEALSERLAS 363 >gi|14520715|ref|NP_126190.1| GTP-binding protein [Pyrococcus abyssi GE5] gi|5457931|emb|CAB49421.1| GTP-binding protein [Pyrococcus abyssi GE5] Length = 387 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 4/119 (3%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++GLPN GKS L ++T + ADYPFTT P ++ + L ++PG+I+ Sbjct: 82 AQIVLVGLPNVGKSELLRALTGVDVESADYPFTTTEPIPAMMNYKDVQIQLVEVPGLIEG 141 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL---RKKIEI 275 A G G+G + L R + IV L E+ + +L E ++ R +IEI Sbjct: 142 AALGKGMGPQLLAVI-RNADAIAIVIDLSEDPIKQMKILLREFERAGIKVNKRRPRIEI 199 >gi|294463311|gb|ADE77191.1| unknown [Picea sitchensis] Length = 369 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 49/87 (56%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +G++G P+ GKST L +T ++A Y FTTL G+++ + L D+PGII+ A Sbjct: 68 VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVIRYRGAKLQLLDLPGIIEGAK 127 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALE 248 G G G + + + +L ++ A++ Sbjct: 128 DGKGRGRQVISTARTCNCILIVLDAIK 154 >gi|262275154|ref|ZP_06052965.1| GTP-binding protein HflX [Grimontia hollisae CIP 101886] gi|262221717|gb|EEY73031.1| GTP-binding protein HflX [Grimontia hollisae CIP 101886] Length = 429 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 19/176 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST +T A AD F TL P L ++ E + ILAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIEVEDVGDTILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T+ +LLH+V A EN+ A +L+E+ A+ + Sbjct: 257 RHLPHDLVAAFKATLQETQEATLLLHVVDASDDRFRENIDAV-NVVLEEIDAHEVPM--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKI 326 ++ +++ID ++ T +++E +P S++ GI + E L +++ Sbjct: 313 --LLVMNKIDNMEDTTPRIERDE-----DGLPRIVWVSALADQGIDLLFEALTERL 361 >gi|325188702|emb|CCA23232.1| GTPdependent nucleic acidbinding protein engD putat [Albugo laibachii Nc14] Length = 374 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 12/109 (11%) Query: 150 KIIW----LKLKLIADIGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV--- 201 + IW L ++ +GI+GLPN GKSTF ++T+ + + A+YPF T+ PN+ + Sbjct: 14 RCIWKNIQLSRRIHRSVGIVGLPNVGKSTFFNALTKTQIAQAANYPFCTIDPNIALTAVP 73 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 E ++ LA + K +G++FL + + V+ H++ E+ Sbjct: 74 DERVRQ--LAKLENSQKTIE--TQVGNQFLNNIRQVSVIAHVLRCFEDT 118 >gi|296242987|ref|YP_003650474.1| small GTP-binding protein [Thermosphaera aggregans DSM 11486] gi|296095571|gb|ADG91522.1| small GTP-binding protein [Thermosphaera aggregans DSM 11486] Length = 335 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 12/156 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNAHQ 222 I G+P AGKST ++ +T AKP+I YPFTT G + E Y +L D PGI+ Sbjct: 164 IAGMPQAGKSTLISRLTNAKPEIGFYPFTTKNIIAGHLTVEPYGRIVLIDTPGILDRP-- 221 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYN---SELRKKIEIV 276 + +R + H+ AL + + Y + ++LS Y S L+ K ++ Sbjct: 222 ---MSERNPIEHRAVLAVKHLADALLFLIDPSPGKYYSLDEQLSVYRTVQSMLQGKPLMI 278 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITG 312 L++ D L + + + G P S++TG Sbjct: 279 VLNKADATPPGELEEAREIVLRKTGVEPLVISALTG 314 >gi|281350116|gb|EFB25700.1| hypothetical protein PANDA_003605 [Ailuropoda melanoleuca] Length = 354 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 52 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 111 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 112 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 169 Query: 280 QID 282 + D Sbjct: 170 KKD 172 >gi|300120167|emb|CBK19721.2| unnamed protein product [Blastocystis hominis] gi|300176600|emb|CBK24265.2| unnamed protein product [Blastocystis hominis] Length = 365 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 49/87 (56%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +G+IG P+ GKST L +T ++A Y FTTL G++ + L D+PGII+ A Sbjct: 64 VGLIGFPSVGKSTLLTKLTGTFSEVAAYEFTTLTCIPGVIHYKGAKIQLLDLPGIIEGAK 123 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALE 248 G G G + + +++L ++ A++ Sbjct: 124 DGKGRGRQIIGTARTCNMILIVLDAMK 150 >gi|197287178|ref|YP_002153050.1| GTPase HflX [Proteus mirabilis HI4320] gi|227357127|ref|ZP_03841496.1| GTP-binding protein HflX [Proteus mirabilis ATCC 29906] gi|194684665|emb|CAR46603.1| GTP-binding protein [Proteus mirabilis HI4320] gi|227162659|gb|EEI47626.1| GTP-binding protein HflX [Proteus mirabilis ATCC 29906] Length = 427 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 19/176 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKS+ +T A AD F TL P L ++ + +LAD G I Sbjct: 197 IPTLSLVGYTNAGKSSLFNRITCADVYAADQLFATLDPTLRRIQVDDVGTVVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T +LLH++ A EEN+ A + +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETREATLLLHVIDAADSRFEENIHAV-ENVLEEIDAHEIP---- 311 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQILECLHDKI 326 + +++ID ++ T +NE +P S+ TG GIP + + L +++ Sbjct: 312 -TLYVMNKIDLLEDFTPRIDRNE-----DNLPVRVWVSAQTGEGIPLLYQALTERL 361 >gi|8778457|gb|AAF79465.1|AC022492_9 F1L3.17 [Arabidopsis thaliana] Length = 412 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 10/122 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L +T + A Y FTTL G++ + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYNDTKIQLLDLPGIIEGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE-----LRKKIEIV 276 +G G G + + + + ++L ++ A + +Y + ++ Y SE L K++E V Sbjct: 125 EGKGRGRQVIAVAKSSDLVLMVLDA----SKVSYGLYV-HVNWYMSEGHRQILTKELEAV 179 Query: 277 GL 278 GL Sbjct: 180 GL 181 >gi|324505798|gb|ADY42486.1| Nucleolar GTP-binding protein 1 [Ascaris suum] Length = 657 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 14/181 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+ + +TRA ++ Y FTT +G Y + + D PG++ Sbjct: 190 LCGFPNVGKSSLMNKLTRADVEVQPYAFTTKALYVGHFDYRYLRWQVIDTPGVL-----D 244 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC--ILDELSAYNSELR----KKIEIVG 277 + +R + L H+ +A+ + A+ C ++E A +R K +VG Sbjct: 245 QPLEERNTIEMQAITALAHLRAAVLFIMDASELCDHTVEEQVALFESIRPLFANKPVLVG 304 Query: 278 LSQIDTVDSDTLARKKNELATQCGQ--VP-FEFSSITGHGIPQILECLHDKIFSIRGENE 334 L+++D V D+L ++K L + + +P FE S++T GI D + + R E++ Sbjct: 305 LNKVDIVKRDSLNKEKAALLNKLEEESIPIFEISTVTQEGITDFKNKACDDLLTQRVESK 364 Query: 335 F 335 Sbjct: 365 L 365 >gi|149641020|ref|XP_001505541.1| PREDICTED: similar to GTP-binding protein [Ornithorhynchus anatinus] Length = 367 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|325959688|ref|YP_004291154.1| small GTP-binding protein [Methanobacterium sp. AL-21] gi|325331120|gb|ADZ10182.1| small GTP-binding protein [Methanobacterium sp. AL-21] Length = 329 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 34/54 (62%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKST L +T A+PK+ADYPFTT +G ++ + + D PG++ Sbjct: 167 IAGFPNVGKSTLLRQLTSAEPKVADYPFTTTGIQIGHIEHKWMPYQFIDTPGLL 220 >gi|91773828|ref|YP_566520.1| GTP-binding protein [Methanococcoides burtonii DSM 6242] gi|91712843|gb|ABE52770.1| GTP-binding domain protein [Methanococcoides burtonii DSM 6242] Length = 356 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 13/99 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F++ T A+P++A YPFTT +G + GY + + D PG++ Sbjct: 162 IVVAGYPNVGKSSFVSMATGARPEVASYPFTTKGVLIGHFERGYDRYQVIDTPGLL---- 217 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD 260 DR + +ER +V L ++A+ +++ A ILD Sbjct: 218 ------DRPM--SERNNVELQAITAI-KHLDAVVLFILD 247 >gi|238750072|ref|ZP_04611575.1| GTP-binding protein hflX [Yersinia rohdei ATCC 43380] gi|238711616|gb|EEQ03831.1| GTP-binding protein hflX [Yersinia rohdei ATCC 43380] Length = 433 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 13/173 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKS+ +T A AD F TL P L + + +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSSLFNKITAADVYAADQLFATLDPTLRRINVADVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENV---QAAYQCILDELSAYNSELRKKI 273 ++ H L+ T + +LLHI+ A + V AA +L E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQASLLLHIIDAADPRVAENMAAVDSVLAEIEADEIP----- 311 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D +NE + V S+ TG GIP + + L +++ Sbjct: 312 TLLVMNKIDLLDDFVPRIDRNE---ENLPVRVWLSAQTGAGIPLLFQALTERL 361 >gi|220931954|ref|YP_002508862.1| small GTP-binding protein [Halothermothrix orenii H 168] gi|219993264|gb|ACL69867.1| small GTP-binding protein [Halothermothrix orenii H 168] Length = 395 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 10/133 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST L ++T A ++AD F TL L + + K+ I++D G IK Sbjct: 179 VALVGYTNAGKSTLLNTLTNANTEVADKLFATLDSTLRRLTLPFGKQIIISDTVGFIKKL 238 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE---ENVQAAYQCILDELSAYNSELRKKIEIV 276 HQ L+ + +LLH+V + E EN +L EL ++ E +I+ Sbjct: 239 PHQLVASFQATLEEIKEADILLHVVDSSEPELENHIKVVNAVLKELGVFHKE-----KIM 293 Query: 277 GLSQIDTVDSDTL 289 L++ID ++ L Sbjct: 294 VLNKIDRLEKGQL 306 >gi|226326646|ref|ZP_03802164.1| hypothetical protein PROPEN_00496 [Proteus penneri ATCC 35198] gi|225204867|gb|EEG87221.1| hypothetical protein PROPEN_00496 [Proteus penneri ATCC 35198] Length = 428 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 17/175 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKS+ +T + AD F TL P L ++ E +LAD G I Sbjct: 198 IPTLSLVGYTNAGKSSLFNHITCSDVYAADQLFATLDPTLRRIQVEDVGTVVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T +LLH++ A EEN+ A + +L+E+ A ++ Sbjct: 258 RHLPHDLVAAFKATLQETREATLLLHVIDAADSRFEENIHAV-ESVLEEIDA------QE 310 Query: 273 IEIVG-LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I + +++ID ++ T +NE + V S+ TG GIP + + L +++ Sbjct: 311 IPTLHVMNKIDLLEDFTPRIDRNE---ENLPVRVWVSAQTGEGIPLLYQALTERL 362 >gi|269219205|ref|ZP_06163059.1| GTP-binding protein YchF [Actinomyces sp. oral taxon 848 str. F0332] gi|269211352|gb|EEZ77692.1| GTP-binding protein YchF [Actinomyces sp. oral taxon 848 str. F0332] Length = 361 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 17/103 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI------ 209 IGI GLPN GKST ++TRA A+YPF T+ PN+G+V + E Sbjct: 3 IGIAGLPNVGKSTLFNALTRATALAANYPFATIEPNVGVVPLPDARLDKLAELFHSAKVV 62 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 DI GI++ A QG G+G++FL + + + A Sbjct: 63 PATVSFVDIAGIVRGASQGEGLGNQFLANIREADAICLVTRAF 105 >gi|156842336|ref|XP_001644536.1| hypothetical protein Kpol_1052p25 [Vanderwaltozyma polyspora DSM 70294] gi|156115181|gb|EDO16678.1| hypothetical protein Kpol_1052p25 [Vanderwaltozyma polyspora DSM 70294] Length = 411 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 21/128 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYP----------NLGIVKEGYKE---- 207 GI+GL N GKST ++T +K A+YPF T+ P L +KE Y+ Sbjct: 12 GIVGLANIGKSTLFQAITNSKLGNPANYPFATIDPLDYRIPIQNEKLDYLKEFYQSERII 71 Query: 208 ---FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 L DI G+ + A G G+G++FL +LH+V +++ + +D + Sbjct: 72 HAPLTLYDIAGLTRGASSGQGLGNKFLNDIRNIDSILHVVRGFKDDEIIHLEKTVDPIRD 131 Query: 262 LSAYNSEL 269 L N EL Sbjct: 132 LELVNDEL 139 >gi|41053317|ref|NP_956332.1| developmentally-regulated GTP-binding protein 1 [Danio rerio] gi|31418943|gb|AAH53264.1| Developmentally regulated GTP binding protein 1 [Danio rerio] Length = 366 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 64 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I EL + L K+ +G Sbjct: 124 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKLIEHELEGFGIRLNKQPPNIGFK 181 Query: 280 QID 282 + D Sbjct: 182 KKD 184 >gi|24586704|gb|AAH39649.1| Developmentally regulated GTP binding protein 1 [Mus musculus] Length = 367 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|6681225|ref|NP_031905.1| developmentally-regulated GTP-binding protein 1 [Mus musculus] gi|57528300|ref|NP_001009685.1| developmentally-regulated GTP-binding protein 1 [Rattus norvegicus] gi|416914|sp|P32233|DRG1_MOUSE RecName: Full=Developmentally-regulated GTP-binding protein 1; Short=DRG-1; AltName: Full=Neural precursor cell expressed developmentally down-regulated protein 3; Short=NEDD-3 gi|220507|dbj|BAA01555.1| GTP-binding protein [Mus musculus] gi|56800526|emb|CAI35204.1| developmentally regulated GTP binding protein 1 [Mus musculus] gi|56971981|gb|AAH88410.1| Developmentally regulated GTP binding protein 1 [Rattus norvegicus] gi|74190421|dbj|BAE25890.1| unnamed protein product [Mus musculus] gi|74196235|dbj|BAE33021.1| unnamed protein product [Mus musculus] gi|184185471|gb|ACC68875.1| developmentally regulated GTP binding protein 1 (predicted) [Rhinolophus ferrumequinum] Length = 367 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|238787540|ref|ZP_04631338.1| GTP-binding protein hflX [Yersinia frederiksenii ATCC 33641] gi|238724327|gb|EEQ15969.1| GTP-binding protein hflX [Yersinia frederiksenii ATCC 33641] Length = 427 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 13/173 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKS+ +T A AD F TL P L + + +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSSLFNKITAADVYAADQLFATLDPTLRRINVADVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENV---QAAYQCILDELSAYNSELRKKI 273 ++ H L+ T + +LLHI+ A + V AA +L E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQASLLLHIIDAADPRVAENMAAVDSVLAEIEADEIP----- 311 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D +NE + V S+ TG GIP + + L +++ Sbjct: 312 TLLVMNKIDLLDDFVPRIDRNE---ENLPVRVWLSAQTGAGIPLLFQALTERL 361 >gi|74026362|ref|XP_829747.1| hypothetical protein [Trypanosoma brucei TREU927] gi|70835133|gb|EAN80635.1| hypothetical protein, conserved [Trypanosoma brucei] Length = 912 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 38/152 (25%) Query: 162 IGIIGLPNAGKSTFLASVTRA-----KPKIADYPFTTLYPNLGI---------------- 200 IG+IG P+AGKSTF +VT ++A +PFTT+ PN+G Sbjct: 468 IGLIGKPSAGKSTFYNAVTNPDNESKAARVAAFPFTTIDPNVGCGFGPIFCPCSLSQPSP 527 Query: 201 -------VKEGY----------KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHI 243 K G+ ++ D+ G+++ A++G G G+RFL VL+HI Sbjct: 528 SSTGQCGAKYGHVTTFGAPHRRHPIVVKDVAGLVQGAYRGKGKGNRFLNDLCDADVLVHI 587 Query: 244 VSALEENVQAAYQCILDELSAYNSELRKKIEI 275 V C E S ++ + + E+ Sbjct: 588 VDGAGATYADGSACAPGEGSTFDDIMWVRGEL 619 >gi|26348781|dbj|BAC38030.1| unnamed protein product [Mus musculus] Length = 367 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|321259998|ref|XP_003194719.1| GTP-binding protein [Cryptococcus gattii WM276] gi|317461191|gb|ADV22932.1| GTP-binding protein, putative [Cryptococcus gattii WM276] Length = 367 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 49/87 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+ T+ + + Y FTTL G+++ L D+PGI+++ Sbjct: 62 ARVCMIGFPSVGKSTLLSKTTKTESAVGAYEFTTLTAIPGVLEYEGARIQLLDLPGIVQD 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 A +G G G + + + ++L ++ A Sbjct: 122 AAKGRGRGRQVVSVAKTADLILLLIDA 148 >gi|293393212|ref|ZP_06637527.1| GTP-binding protein HflX [Serratia odorifera DSM 4582] gi|291424358|gb|EFE97572.1| GTP-binding protein HflX [Serratia odorifera DSM 4582] Length = 426 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 7/170 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A AD F TL P L + + +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRITSADVYAADQLFATLDPTLRRIDVADVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ H L+ T + +LLH++ A + V + + L+ +S+ + ++ Sbjct: 257 RHLPHDLVAAFKATLQETRQASLLLHVIDAADTRVDENIEAVNTVLAEIDSD--EIPTLL 314 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ID +D +NE + + S+ +G GIP + + L +++ Sbjct: 315 VMNKIDMLDDFVPRIDRNE---ENLPIRVWLSAASGEGIPLLFQALTERL 361 >gi|224072042|ref|XP_002199790.1| PREDICTED: putative developmentally regulated GTP binding protein 1 [Taeniopygia guttata] Length = 367 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|197128817|gb|ACH45315.1| putative developmentally regulated GTP binding protein 1 [Taeniopygia guttata] Length = 367 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|98162715|ref|NP_001027533.1| developmentally regulated GTP binding protein 1 [Gallus gallus] Length = 367 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|15678878|ref|NP_275995.1| GTP1/OBG family GTP-binding protein [Methanothermobacter thermautotrophicus str. Delta H] gi|2621950|gb|AAB85356.1| GTP-binding protein, GTP1/OBG family [Methanothermobacter thermautotrophicus str. Delta H] Length = 336 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 31/179 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + I G PN GKST L ++T A+P++ADYPFTT +G ++ +K + D PG++ Sbjct: 165 VVIAGFPNVGKSTLLRTLTGAEPEVADYPFTTKGIQIGHLERKWKRIQVIDTPGLL---- 220 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD--ELSAYNSE--------LRK 271 DR ++ + ++ L + AL EN+ I D E Y E +R Sbjct: 221 ------DRPVE--DMNNIELQAMVAL-ENIADVIMFIFDASETCGYTLESQYSLYLGIRS 271 Query: 272 KIEIVGLSQIDTVDSDTLARKKNELATQCGQV--PFEFSSITGHGIPQI---LECLHDK 325 +I ++ + +D LA L V P + S+ G G+ +I LE L++K Sbjct: 272 VFDIPVVTVFNKMD---LAENVKYLEEYINMVEDPLKVSAFEGRGVSKIIKKLEGLYEK 327 >gi|221132812|ref|XP_002166768.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 547 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 30/186 (16%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA ++ Y FTT +G + Y + + D PGI+ +A + Sbjct: 85 LTGFPNVGKSSFMNKVTRADVEVQPYAFTTKSLYVGHMDYQYLRWQVVDTPGILDHALE- 143 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE--------- 274 ER + + ++AL +++A+ ++D + L ++IE Sbjct: 144 -----------ERNTIEMQAITAL-AHLRASIIYVMDISEQCSKSLNEQIELFNSIKPLF 191 Query: 275 -----IVGLSQIDTVDSDTLARKKNELATQCGQ--VP-FEFSSITGHGIPQILECLHDKI 326 I+ L+++D + D L ++K L Q + +P S+I+ G+ + D++ Sbjct: 192 SNKPIIIALNKVDIIGLDDLPQEKKNLLNQFQEEGIPVIPMSTISEEGVMNVKVEACDRL 251 Query: 327 FSIRGE 332 + R E Sbjct: 252 LAQRVE 257 >gi|76634732|ref|XP_870904.1| PREDICTED: developmentally regulated GTP binding protein 1 isoform 2 [Bos taurus] gi|297482452|ref|XP_002692796.1| PREDICTED: developmentally regulated GTP binding protein 1-like [Bos taurus] gi|296480521|gb|DAA22636.1| developmentally regulated GTP binding protein 1-like [Bos taurus] Length = 367 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTT+ G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTMTTVPGVIRYKCAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|238755903|ref|ZP_04617231.1| GTP-binding protein hflX [Yersinia ruckeri ATCC 29473] gi|238705862|gb|EEP98251.1| GTP-binding protein hflX [Yersinia ruckeri ATCC 29473] Length = 426 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKS+ +T A AD F TL P L + + +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSSLFNRITSADVYAADKLFATLDPTLRRINVADVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ A + ENV AA + +L E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQASLLLHVIDAADPRVSENV-AAVETVLAEIEADEIP---- 311 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D +NE + + S+ TG GIP + + L +++ Sbjct: 312 -TLLVMNKIDMLDDFEPRIDRNE---ENLPIRVWLSAKTGAGIPLLFQALTERL 361 >gi|220904152|ref|YP_002479464.1| GTP-binding proten HflX [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868451|gb|ACL48786.1| GTP-binding proten HflX [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 561 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 19/172 (11%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAH 221 ++G NAGKST L ++TR++ + + F TL P ++ KE ILAD G I+N Sbjct: 387 ALVGYTNAGKSTLLNTLTRSEVLVENKLFATLDPTTRRLRFPAEKELILADTVGFIRNLP 446 Query: 222 QGAGIGDRF---LKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKIEI 275 + + D F L+ E H+LLH+ A ++ +A + IL E+ EL + + Sbjct: 447 K--ELMDAFRATLEELEAAHLLLHVADASHPDLLQQISAVETILAEM-----ELDRMPRL 499 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 + L++ D +++ A ELA ++ TG G +LE L ++ Sbjct: 500 LILNKWDQLEAPARA----ELADAFPHA-LPVAAKTGEGCKPLLEQLEMRLL 546 >gi|326431968|gb|EGD77538.1| hypothetical protein PTSG_12765 [Salpingoeca sp. ATCC 50818] Length = 1000 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 33/132 (25%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-----PKIADYPFTTLYPNLG----------------- 199 IG++G P+AGKSTF ++T K K+A Y FTT+ PN+G Sbjct: 539 IGLVGKPSAGKSTFFNAITDPKDPSKAAKVAAYSFTTIDPNVGQGYFTTPCPSEQLPGVE 598 Query: 200 --------IVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA---LE 248 I + I+ D+ G++ A++G G G+ FL VL+H+V A + Sbjct: 599 STPAHGFAIGRRRKVPVIIKDVAGLVPGAYKGRGKGNAFLNDLCDADVLIHVVDASGMSD 658 Query: 249 ENVQAAYQCILD 260 EN QC D Sbjct: 659 ENGVIDAQCSRD 670 >gi|20094635|ref|NP_614482.1| GTPase [Methanopyrus kandleri AV19] gi|19887790|gb|AAM02412.1| Predicted GTPase of the OBG/HflX superfamily [Methanopyrus kandleri AV19] Length = 388 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 3/105 (2%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G PNAGKS L +T A P +A YP+TT P G+++ + L +IP I + Sbjct: 82 AQVALVGPPNAGKSALLRELTNADPDVASYPYTTKEPVPGMMEYKDVQIQLVEIPPIYEG 141 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 +G G +F+ L +V E+ V+ + +L EL + Sbjct: 142 FTRGD--GSKFVGVIRNADALCLVVDLTEDPVE-QLETVLRELES 183 >gi|226955325|gb|ACO95321.1| developmentally regulated GTP binding protein 1 (predicted) [Dasypus novemcinctus] Length = 367 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|149720247|ref|XP_001496920.1| PREDICTED: developmentally regulated GTP binding protein 1 isoform 1 [Equus caballus] Length = 367 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|73995099|ref|XP_866384.1| PREDICTED: similar to developmentally regulated GTP binding protein 1 isoform 6 [Canis familiaris] Length = 335 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|188586779|ref|YP_001918324.1| GTP-binding protein HSR1-related [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351466|gb|ACB85736.1| GTP-binding protein HSR1-related [Natranaerobius thermophilus JW/NM-WN-LF] Length = 324 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 41/66 (62%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I ++G PN GKS+ +A++TRAK K+ADYP++T P G++ L D P +++++ Sbjct: 84 IVLVGYPNTGKSSLVATLTRAKAKVADYPYSTALPLPGMMPYRDTWVQLVDTPPVMEDSI 143 Query: 222 QGAGIG 227 IG Sbjct: 144 ASELIG 149 >gi|67591456|ref|XP_665553.1| developmentally regulated GTP-binding protein 2 [Cryptosporidium hominis TU502] gi|54656299|gb|EAL35324.1| developmentally regulated GTP-binding protein 2 [Cryptosporidium hominis] Length = 368 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 51/93 (54%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST + +T + +A Y FTTL GI+K + L D+PGII+ Sbjct: 63 ARVILIGFPSVGKSTLMHELTGTETAVAAYEFTTLTCVPGIMKYNEAKIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A G G G + + ++L ++ + +++ Q Sbjct: 123 AATGRGRGRQVIAVAHSADLVLMVIDSTKDDSQ 155 >gi|66356360|ref|XP_625327.1| DRG like OBG family GTpase fused to an RNA binding domain TGS domain, Fun11p [Cryptosporidium parvum Iowa II] gi|46226301|gb|EAK87314.1| DRG like OBG family GTpase fused to an RNA binding domain TGS domain, Fun11p [Cryptosporidium parvum Iowa II] Length = 368 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 51/93 (54%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST + +T + +A Y FTTL GI+K + L D+PGII+ Sbjct: 63 ARVILIGFPSVGKSTLMHELTGTETAVAAYEFTTLTCVPGIMKYNEAKIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A G G G + + ++L ++ + +++ Q Sbjct: 123 AATGRGRGRQVIAVAHSADLVLMVIDSTKDDSQ 155 >gi|299755987|ref|XP_001829016.2| developmentally regulated GTP-binding protein [Coprinopsis cinerea okayama7#130] gi|298411472|gb|EAU92651.2| developmentally regulated GTP-binding protein [Coprinopsis cinerea okayama7#130] Length = 262 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 50/93 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+ T+ + A Y FTTL G+++ L D+PGI++ Sbjct: 50 ARVALIGFPSVGKSTLLSKTTQTASEAAAYEFTTLTAIPGVIEYQGARIQLLDLPGILEG 109 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A G G G + + + ++L ++ A + + Q Sbjct: 110 ASSGRGRGRQVVATAKTADLILIMLDATKSDEQ 142 >gi|255626273|gb|ACU13481.1| unknown [Glycine max] Length = 271 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 2/111 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L +T + A Y FTTL GI+ + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTPLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIEGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 +G G G + + + + ++L ++ A + Q + EL A L K+ Sbjct: 125 EGKGRGRQVIAVAKSSDIVLMVLDA--SKSEGHRQILTKELEAVGLRLNKR 173 >gi|119580379|gb|EAW59975.1| developmentally regulated GTP binding protein 1, isoform CRA_b [Homo sapiens] Length = 349 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 47 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 106 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 107 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 164 Query: 280 QID 282 + D Sbjct: 165 KKD 167 >gi|313224993|emb|CBY20786.1| unnamed protein product [Oikopleura dioica] Length = 368 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 4/114 (3%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-ELSAYNSELRKK 272 A G G G + + H++ + L+ ++ I++ EL + L KK Sbjct: 125 AKDGKGRGKQVIAVARTCHLIFLCLDVLKP---LGHKAIIEHELEGFGIRLNKK 175 >gi|260946025|ref|XP_002617310.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] gi|238849164|gb|EEQ38628.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] Length = 396 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/138 (30%), Positives = 59/138 (42%), Gaps = 28/138 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTL----------YPNLGIVKEGYKE---- 207 GI+GL N GKSTF ++TR A+YPF T+ P + E YK Sbjct: 25 GIVGLANVGKSTFFQAITRCPLGNPANYPFATIDPEEARVIVPSPRFDKLCELYKPKSEV 84 Query: 208 ---FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAA 254 + DI G+ K AH G G+G+ FL + + +V E+ N A Sbjct: 85 PAFMTIYDIAGLTKGAHAGEGLGNNFLANIRAVDAIYQVVRCFEDSEIIHINDEVNPIAD 144 Query: 255 YQCILDELSAYNSELRKK 272 + I DEL + E +K Sbjct: 145 LEIIKDELRLKDIEFAQK 162 >gi|170290991|ref|YP_001737807.1| translation-associated GTPase [Candidatus Korarchaeum cryptofilum OPF8] gi|170175071|gb|ACB08124.1| GTPase of unknown function domain protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 397 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 24/109 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI----VKEGYKEF--------- 208 IG++G N GK+TF ++ T + PF T+ PN GI VK EF Sbjct: 3 IGVVGKTNVGKTTFFSAATLVDAARENRPFVTIEPNEGIGYVRVKSVCTEFGVRCQPKYG 62 Query: 209 -----------ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 L D+ G+++ AH+G G+G++FL R V + +V A Sbjct: 63 WCNGTHRFVPVKLLDVAGLVRGAHKGRGLGNKFLDDLRRASVNIIVVDA 111 >gi|30585289|gb|AAP36917.1| Homo sapiens developmentally regulated GTP binding protein 1 [synthetic construct] gi|60653963|gb|AAX29674.1| developmentally regulated GTP binding protein 1 [synthetic construct] gi|60653965|gb|AAX29675.1| developmentally regulated GTP binding protein 1 [synthetic construct] Length = 368 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|194043274|ref|XP_001927288.1| PREDICTED: developmentally-regulated GTP-binding protein 1 isoform 1 [Sus scrofa] Length = 367 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|254292140|ref|ZP_04962912.1| GTP-binding protein HflX [Vibrio cholerae AM-19226] gi|150421939|gb|EDN13914.1| GTP-binding protein HflX [Vibrio cholerae AM-19226] Length = 429 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 23/180 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL---GIVKEGYKEFILADIPG 215 I I ++G NAGKST +T A AD F TL P L +V G +LAD G Sbjct: 197 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIDLVDVGSA--VLADTVG 254 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELR 270 I++ H L+ T+ +LLH+V A EN+QA + +L E+ A+ Sbjct: 255 FIRHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAV-ETVLQEIDAHEVPT- 312 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFS 328 ++ +++ID ++ + ++++ VP S++ G GI + E L +++ S Sbjct: 313 ----LLVMNKIDNLEEQSPRIERDDEG-----VPRVVWISAMQGAGIELLFEALSERLAS 363 >gi|60826622|gb|AAX36765.1| developmentally regulated GTP binding protein 1 [synthetic construct] Length = 368 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|72037482|ref|XP_791171.1| PREDICTED: similar to GTP-binding protein DRG [Strongylocentrotus purpuratus] gi|115745098|ref|XP_001177502.1| PREDICTED: similar to GTP-binding protein DRG [Strongylocentrotus purpuratus] Length = 366 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 64 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + ++L ++ L+ + I EL + L KK +G Sbjct: 124 AKDGKGRGRQVIAVARTCSLILIVLDVLKP--LKHKKLIEHELEGFGIRLNKKPPNIGYK 181 Query: 280 QID 282 + D Sbjct: 182 RKD 184 >gi|4758796|ref|NP_004138.1| developmentally-regulated GTP-binding protein 1 [Homo sapiens] gi|77736327|ref|NP_001029863.1| developmentally-regulated GTP-binding protein 1 [Bos taurus] gi|281182824|ref|NP_001162241.1| developmentally-regulated GTP-binding protein 1 [Papio anubis] gi|284004954|ref|NP_001164823.1| developmentally-regulated GTP-binding protein 1 [Oryctolagus cuniculus] gi|73995091|ref|XP_534738.2| PREDICTED: similar to developmentally regulated GTP binding protein 1 isoform 1 [Canis familiaris] gi|109093886|ref|XP_001110881.1| PREDICTED: developmentally-regulated GTP-binding protein 1-like isoform 2 [Macaca mulatta] gi|114685940|ref|XP_515085.2| PREDICTED: hypothetical protein LOC458770 [Pan troglodytes] gi|296191707|ref|XP_002743739.1| PREDICTED: developmentally-regulated GTP-binding protein 1 [Callithrix jacchus] gi|301759501|ref|XP_002915595.1| PREDICTED: developmentally-regulated GTP-binding protein 1-like [Ailuropoda melanoleuca] gi|6685390|sp|Q9Y295|DRG1_HUMAN RecName: Full=Developmentally-regulated GTP-binding protein 1; Short=DRG-1; AltName: Full=Neural precursor cell expressed developmentally down-regulated protein 3; Short=NEDD-3 gi|118572290|sp|Q3MHP5|DRG1_BOVIN RecName: Full=Developmentally-regulated GTP-binding protein 1; Short=DRG-1 gi|4127988|emb|CAA06775.1| GTP-binding protein [Homo sapiens] gi|4218945|gb|AAD12240.1| developmentally regulated GTP-binding protein [Homo sapiens] gi|17939479|gb|AAH19285.1| Developmentally regulated GTP binding protein 1 [Homo sapiens] gi|30583313|gb|AAP35901.1| developmentally regulated GTP binding protein 1 [Homo sapiens] gi|47678507|emb|CAG30374.1| DRG1 [Homo sapiens] gi|49457071|emb|CAG46856.1| DRG1 [Homo sapiens] gi|55660855|emb|CAH71744.1| developmentally regulated GTP binding protein 1 [Homo sapiens] gi|55957172|emb|CAI12876.1| developmentally regulated GTP binding protein 1 [Homo sapiens] gi|61362420|gb|AAX42218.1| developmentally regulated GTP binding protein 1 [synthetic construct] gi|61362426|gb|AAX42219.1| developmentally regulated GTP binding protein 1 [synthetic construct] gi|75773520|gb|AAI05159.1| Developmentally regulated GTP binding protein 1 [Bos taurus] gi|109451236|emb|CAK54479.1| DRG1 [synthetic construct] gi|109451814|emb|CAK54778.1| DRG1 [synthetic construct] gi|119580380|gb|EAW59976.1| developmentally regulated GTP binding protein 1, isoform CRA_c [Homo sapiens] gi|123979574|gb|ABM81616.1| developmentally regulated GTP binding protein 1 [synthetic construct] gi|123994393|gb|ABM84798.1| developmentally regulated GTP binding protein 1 [synthetic construct] gi|159461543|gb|ABW96816.1| developmentally regulated GTP binding protein 1 (predicted) [Papio anubis] gi|167045788|gb|ABZ10457.1| developmentally regulated GTP binding protein 1 (predicted) [Callithrix jacchus] gi|170649604|gb|ACB21192.1| developmentally regulated GTP binding protein 1 (predicted) [Callicebus moloch] gi|189055041|dbj|BAG38025.1| unnamed protein product [Homo sapiens] gi|190402292|gb|ACE77699.1| developmentally regulated GTP binding protein 1 (predicted) [Sorex araneus] gi|208967757|dbj|BAG72524.1| developmentally regulated GTP binding protein 1 [synthetic construct] gi|217418244|gb|ACK44249.1| developmentally regulated GTP binding protein 1 (predicted) [Oryctolagus cuniculus] gi|296478382|gb|DAA20497.1| developmentally-regulated GTP-binding protein 1 [Bos taurus] Length = 367 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|313242038|emb|CBY34219.1| unnamed protein product [Oikopleura dioica] Length = 368 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 4/114 (3%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-ELSAYNSELRKK 272 A G G G + + H++ + L+ ++ I++ EL + L KK Sbjct: 125 AKDGKGRGKQVIAVARTCHLIFLCLDVLKP---LGHKAIIEHELEGFGIRLNKK 175 >gi|194043276|ref|XP_001927321.1| PREDICTED: developmentally-regulated GTP-binding protein 1 isoform 2 [Sus scrofa] Length = 368 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|73995095|ref|XP_866356.1| PREDICTED: similar to developmentally regulated GTP binding protein 1 isoform 4 [Canis familiaris] Length = 369 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|144898695|emb|CAM75559.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense MSR-1] Length = 367 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 18/102 (17%) Query: 161 DIGIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKST F A A + A+YPF T+ PN+G V K Sbjct: 4 NCGIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGRVAVPDPRLDKLVVIGKSQK 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 E + DI G+++ A +G G+G++FL + ++H++ Sbjct: 64 EIPTQLEFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVL 105 >gi|41615249|ref|NP_963747.1| translation-associated GTPase [Nanoarchaeum equitans Kin4-M] gi|40068973|gb|AAR39308.1| NEQ463 [Nanoarchaeum equitans Kin4-M] Length = 397 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 24/110 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +GI+G PN GKSTF ++T +I + PF T+ PN G+ Sbjct: 4 VGIVGKPNVGKSTFFKALTLQPVEIDNRPFVTIEPNKGVAYVRVEDVGPEFGVISNPRHG 63 Query: 203 --EGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 +G F+ + DI G++ AH+G G+G++FL + ++ +V A+ Sbjct: 64 FIKGKYRFVPIEVIDIAGLVPGAHEGKGLGNQFLDDIRKADGIIMVVDAV 113 >gi|14591438|ref|NP_143518.1| developmentally regulated GTP-binding protein [Pyrococcus horikoshii OT3] gi|3258101|dbj|BAA30784.1| 387aa long hypothetical developmentally regulated GTP-binding protein [Pyrococcus horikoshii OT3] Length = 387 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 1/104 (0%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++GLPN GKS L ++T + ADYPFTT P ++ + L ++PG+++ Sbjct: 82 AQIVLVGLPNVGKSELLRALTGVDVESADYPFTTTEPVPAMMNYKDVQIQLVEVPGLLEG 141 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 A G G+G + L R + IV L E+ + +L E Sbjct: 142 AALGKGMGPQLLAVI-RNADAIAIVIDLSEDPIKQMEILLREFE 184 >gi|73995097|ref|XP_866370.1| PREDICTED: similar to developmentally regulated GTP binding protein 1 isoform 5 [Canis familiaris] Length = 367 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|76156816|gb|AAX27940.2| SJCHGC03543 protein [Schistosoma japonicum] Length = 356 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L ++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 63 ARIGFVGFPSVGKSTLLCNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + ++L ++ L+ Sbjct: 123 AKDGKGRGKQVIAVARTCTLILMVLDVLK 151 >gi|73995101|ref|XP_866396.1| PREDICTED: similar to developmentally regulated GTP binding protein 1 isoform 7 [Canis familiaris] Length = 367 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|91794552|ref|YP_564203.1| GTP-binding protein, HSR1-related [Shewanella denitrificans OS217] gi|91716554|gb|ABE56480.1| GTP-binding protein, HSR1-related [Shewanella denitrificans OS217] Length = 435 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 1/111 (0%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A + ++G NAGKST +T + AD F TL P L + ILAD G I+ Sbjct: 197 LATVSLVGYTNAGKSTLFNGLTSSDVYAADQLFATLDPTLRKLDLPDGAVILADTVGFIR 256 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 + H L+ T + +LLHIV ++N+Q + + D L +++ Sbjct: 257 HLPHDLVAAFKATLQETRQAELLLHIVDCADDNMQDNFDQVQDVLKEIDAD 307 >gi|238757520|ref|ZP_04618705.1| GTP-binding protein hflX [Yersinia aldovae ATCC 35236] gi|238704282|gb|EEP96814.1| GTP-binding protein hflX [Yersinia aldovae ATCC 35236] Length = 433 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 17/175 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKS+ +T A AD F TL P L + + +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSSLFNKITAADVYAADQLFATLDPTLRRINVADVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENV---QAAYQCILDELSAYNSELRKKI 273 ++ H L+ T + +LLHI+ A + V AA +L E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQASLLLHIIDAADPRVAENMAAVDSVLAEIEADEIP----- 311 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQILECLHDKI 326 ++ +++ID +D +NE +P S+ TG GIP + + L +++ Sbjct: 312 TLLVMNKIDLLDDFVPRIDRNE-----DNLPVRVWLSAQTGAGIPLLFQALTERL 361 >gi|156542821|ref|XP_001607996.1| PREDICTED: similar to developmentally regulated GTP-binding protein 1 (drg 1) [Nasonia vitripennis] Length = 367 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 64 ARIGFVGFPSVGKSTLLSTLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT L+ IV Sbjct: 124 AKDGKGRGRQVIA-VARTCSLIFIV 147 >gi|302761628|ref|XP_002964236.1| hypothetical protein SELMODRAFT_82136 [Selaginella moellendorffii] gi|300167965|gb|EFJ34569.1| hypothetical protein SELMODRAFT_82136 [Selaginella moellendorffii] Length = 371 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 49/87 (56%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +G++G P+ GKST L +T ++A Y FTTL G++K + L D+PGII+ A Sbjct: 53 VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVIKYRGAKIQLLDLPGIIEGAK 112 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALE 248 G G G + + + ++ ++ A++ Sbjct: 113 DGKGRGRQVISTARTCNCIIIVLDAIK 139 >gi|119474821|ref|ZP_01615174.1| GTP-binding protein HflX [marine gamma proteobacterium HTCC2143] gi|119451024|gb|EAW32257.1| GTP-binding protein HflX [marine gamma proteobacterium HTCC2143] Length = 433 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 16/170 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T+A +AD F TL P L V + +LAD G I Sbjct: 198 IPTVSLVGYTNAGKSTLFNTLTQANVYVADQLFATLDPTLRRVSIPDFGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKI 273 ++ H+ L+ ++ +L+H++ +E + A + +L+E+ A + ++ Sbjct: 258 RHLPHKLVEAFRATLEEAAQSDLLIHVIDCADEEREDNIAQVEVVLNEIGA---DAIPRL 314 Query: 274 EIVGLSQIDTVDSD-TLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 EI ++ID VDS + R K+ +A + S+ G G+ I +CL Sbjct: 315 EI--YNKIDLVDSKPRIDRDKDGIARRVW-----VSAQNGSGLDLIEQCL 357 >gi|288560985|ref|YP_003424471.1| GTP-binding protein [Methanobrevibacter ruminantium M1] gi|288543695|gb|ADC47579.1| GTP-binding protein [Methanobrevibacter ruminantium M1] Length = 351 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 10/167 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKST L +T A+P++A+YPFTT +G ++ ++ + + D PG++ Sbjct: 165 IVIAGFPNVGKSTLLTHITDAEPQVANYPFTTKGIQIGHFEKRWQHYQIIDTPGLLDRP- 223 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN--SELRKKIE---IV 276 IGD L H+ A+ A+ C + YN E++ + I Sbjct: 224 ----IGDMNDIELNAMVALEHLADAILFIFDASETCGYALENQYNLLEEIKNVFDAPIIY 279 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 +++D D D + + P S+ G G+ +I++ + Sbjct: 280 LFNKMDISDYDGARHDYVQEYIDKTENPLLISAAEGEGLEEIIQLIQ 326 >gi|159507449|gb|ABW97739.1| developmentally regulated GTP binding protein 1 [Pisum sativum] Length = 368 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 49/89 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G++G P+ GKST L +T ++A Y FTTL G++ + L D+PGII+ Sbjct: 65 ARVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + + +L ++ A++ Sbjct: 125 AKDGKGRGRQVISTARTCNCILIVLDAIK 153 >gi|58268900|ref|XP_571606.1| cytoplasm protein [Cryptococcus neoformans var. neoformans JEC21] gi|57227841|gb|AAW44299.1| cytoplasm protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 367 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 49/87 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+ T+ + + Y FTTL G+++ L D+PGI+++ Sbjct: 62 ARVCMIGFPSVGKSTLLSKTTKTESVVGAYEFTTLTAIPGVLEYEGARIQLLDLPGIVQD 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 A +G G G + + + ++L ++ A Sbjct: 122 AAKGRGRGRQVVSVAKTADLILLLIDA 148 >gi|237835245|ref|XP_002366920.1| developmentally regulated GTP-binding protein 1, putative [Toxoplasma gondii ME49] gi|211964584|gb|EEA99779.1| developmentally regulated GTP-binding protein 1, putative [Toxoplasma gondii ME49] gi|221485782|gb|EEE24052.1| conserved hypothetical protein [Toxoplasma gondii GT1] gi|221503842|gb|EEE29526.1| developmentally regulated GTP-binding protein, putative [Toxoplasma gondii VEG] Length = 367 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G++G P+ GKST L +T ++A Y FTTL G+ K + L D+PGII+ Sbjct: 65 ARVGLVGFPSVGKSTLLNKLTGTFSEVAAYEFTTLTCVPGVFKYKGAKVQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + ++L ++ ++ Q I EL + L KK Sbjct: 125 AKDGKGRGKQVIGVARTCSLILIVLDVMKPITHK--QIIERELEGFGIRLNKK 175 >gi|229526988|ref|ZP_04416384.1| GTP-binding protein HflX [Vibrio cholerae 12129(1)] gi|229335511|gb|EEO00992.1| GTP-binding protein HflX [Vibrio cholerae 12129(1)] Length = 429 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 23/180 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL---GIVKEGYKEFILADIPG 215 I I ++G NAGKST +T A AD F TL P L +V G +LAD G Sbjct: 197 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIDLVDVGPA--VLADTVG 254 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELR 270 I++ H L+ T+ +LLH+V A EN+QA + +L E+ A+ Sbjct: 255 FIRHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAV-ETVLQEIDAHEVPT- 312 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFS 328 ++ +++ID ++ + ++++ VP S++ G GI + E L +++ S Sbjct: 313 ----LLVMNKIDNLEEQSPRIERDDEG-----VPRVVWLSAMQGAGIELLFEALSERLAS 363 >gi|117618820|ref|YP_855468.1| GTP-binding protein HflX [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560227|gb|ABK37175.1| GTP-binding protein HflX [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 428 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 7/166 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 + + ++G NAGKST +T A AD F TL P L +V + + ILAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNQLTAASVYAADQLFATLDPTLRKLVIQDVGDVILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ H L+ T +LLH+V +E +Q + + L+ ++ R ++ I Sbjct: 257 RHLPHDLVAAFKATLQETREADLLLHVVDCADEQMQENIESVQQVLAEIEADDRPQLMIC 316 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 ++ID + + +++E + V S+ TG G + L Sbjct: 317 --NKIDKLGEHPVGLERDE---EGRPVRVWLSAQTGEGCADLFTAL 357 >gi|66514467|ref|XP_394753.2| PREDICTED: GTP-binding protein 128up-like isoform 1 [Apis mellifera] Length = 367 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 64 ARIGFVGFPSVGKSTLLSTLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT L+ IV Sbjct: 124 AKDGKGRGRQVIA-VARTCSLIFIV 147 >gi|170740631|ref|YP_001769286.1| GTP-dependent nucleic acid-binding protein EngD [Methylobacterium sp. 4-46] gi|168194905|gb|ACA16852.1| GTP-binding protein YchF [Methylobacterium sp. 4-46] Length = 365 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A A + A+YPF T+ PN+G V +E I Sbjct: 6 GIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGEVAVPDPRLDDLARIANSREII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+++ A +G G+G++FL + + H+V E+ Sbjct: 66 PTRLTFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVVRCFED 110 >gi|22124545|ref|NP_667968.1| putative GTPase HflX [Yersinia pestis KIM 10] gi|45440384|ref|NP_991923.1| putative GTPase HflX [Yersinia pestis biovar Microtus str. 91001] gi|51594778|ref|YP_068969.1| GTPase HflX [Yersinia pseudotuberculosis IP 32953] gi|108809900|ref|YP_653816.1| putative GTPase HflX [Yersinia pestis Antiqua] gi|108813457|ref|YP_649224.1| putative GTPase HflX [Yersinia pestis Nepal516] gi|145600847|ref|YP_001164923.1| putative GTPase HflX [Yersinia pestis Pestoides F] gi|150260582|ref|ZP_01917310.1| GTP-binding protein [Yersinia pestis CA88-4125] gi|162418144|ref|YP_001605278.1| putative GTPase HflX [Yersinia pestis Angola] gi|165926704|ref|ZP_02222536.1| GTP-binding protein HflX [Yersinia pestis biovar Orientalis str. F1991016] gi|165936503|ref|ZP_02225071.1| GTP-binding protein HflX [Yersinia pestis biovar Orientalis str. IP275] gi|166011873|ref|ZP_02232771.1| GTP-binding protein HflX [Yersinia pestis biovar Antiqua str. E1979001] gi|166213974|ref|ZP_02240009.1| GTP-binding protein HflX [Yersinia pestis biovar Antiqua str. B42003004] gi|167400529|ref|ZP_02306038.1| GTP-binding protein HflX [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419401|ref|ZP_02311154.1| GTP-binding protein HflX [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423439|ref|ZP_02315192.1| GTP-binding protein HflX [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170026012|ref|YP_001722517.1| putative GTPase HflX [Yersinia pseudotuberculosis YPIII] gi|186893786|ref|YP_001870898.1| putative GTPase HflX [Yersinia pseudotuberculosis PB1/+] gi|218927577|ref|YP_002345452.1| putative GTPase HflX [Yersinia pestis CO92] gi|229836634|ref|ZP_04456800.1| predicted GTPase [Yersinia pestis Pestoides A] gi|229840246|ref|ZP_04460405.1| predicted GTPase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842324|ref|ZP_04462479.1| predicted GTPase [Yersinia pestis biovar Orientalis str. India 195] gi|229903937|ref|ZP_04519050.1| predicted GTPase [Yersinia pestis Nepal516] gi|270489076|ref|ZP_06206150.1| GTP-binding protein HflX [Yersinia pestis KIM D27] gi|294502483|ref|YP_003566545.1| GTP-binding protein [Yersinia pestis Z176003] gi|21957343|gb|AAM84219.1|AE013665_8 putative GTP binding subunit for protease of lambda cII repressor [Yersinia pestis KIM 10] gi|45435240|gb|AAS60800.1| GTP-binding protein [Yersinia pestis biovar Microtus str. 91001] gi|51588060|emb|CAH19666.1| GTP-binding protein [Yersinia pseudotuberculosis IP 32953] gi|108777105|gb|ABG19624.1| GTP-binding protein [Yersinia pestis Nepal516] gi|108781813|gb|ABG15871.1| GTP-binding protein [Yersinia pestis Antiqua] gi|115346188|emb|CAL19056.1| GTP-binding protein [Yersinia pestis CO92] gi|145212543|gb|ABP41950.1| GTP-binding protein [Yersinia pestis Pestoides F] gi|149289990|gb|EDM40067.1| GTP-binding protein [Yersinia pestis CA88-4125] gi|162350959|gb|ABX84907.1| GTP-binding protein HflX [Yersinia pestis Angola] gi|165915619|gb|EDR34228.1| GTP-binding protein HflX [Yersinia pestis biovar Orientalis str. IP275] gi|165921327|gb|EDR38551.1| GTP-binding protein HflX [Yersinia pestis biovar Orientalis str. F1991016] gi|165989232|gb|EDR41533.1| GTP-binding protein HflX [Yersinia pestis biovar Antiqua str. E1979001] gi|166204769|gb|EDR49249.1| GTP-binding protein HflX [Yersinia pestis biovar Antiqua str. B42003004] gi|166963395|gb|EDR59416.1| GTP-binding protein HflX [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049897|gb|EDR61305.1| GTP-binding protein HflX [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057609|gb|EDR67355.1| GTP-binding protein HflX [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752546|gb|ACA70064.1| GTP-binding proten HflX [Yersinia pseudotuberculosis YPIII] gi|186696812|gb|ACC87441.1| GTP-binding proten HflX [Yersinia pseudotuberculosis PB1/+] gi|229679707|gb|EEO75810.1| predicted GTPase [Yersinia pestis Nepal516] gi|229690634|gb|EEO82688.1| predicted GTPase [Yersinia pestis biovar Orientalis str. India 195] gi|229696612|gb|EEO86659.1| predicted GTPase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706318|gb|EEO92326.1| predicted GTPase [Yersinia pestis Pestoides A] gi|262360513|gb|ACY57234.1| GTP-binding protein [Yersinia pestis D106004] gi|262364461|gb|ACY61018.1| GTP-binding protein [Yersinia pestis D182038] gi|270337580|gb|EFA48357.1| GTP-binding protein HflX [Yersinia pestis KIM D27] gi|294352942|gb|ADE63283.1| GTP-binding protein [Yersinia pestis Z176003] gi|320013760|gb|ADV97331.1| putative GTPase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 428 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 17/175 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKS+ +T A AD F TL P L + + +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSSLFNKITAADVYAADQLFATLDPTLRRINVADVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENV---QAAYQCILDELSAYNSELRKKI 273 ++ H L+ T + +LLHI+ A + V AA +L E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQASLLLHIIDAADPRVAENMAAVDTVLAEIEADEIP----- 311 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQILECLHDKI 326 ++ +++ID +D +NE +P S+ TG GIP + + L +++ Sbjct: 312 TLLVMNKIDLLDDFVPRIDRNE-----DNLPVRVWLSAQTGAGIPLLFQALTERL 361 >gi|312882815|ref|ZP_07742548.1| putative GTPase HflX [Vibrio caribbenthicus ATCC BAA-2122] gi|309369507|gb|EFP97026.1| putative GTPase HflX [Vibrio caribbenthicus ATCC BAA-2122] Length = 429 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 7/114 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKST +T+A AD F TL P L + ILAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNQITQASVYAADQLFATLDPTLRKIDVADIGSAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYN 266 ++ H L+ T+ +LLH+V A EN+ A ++ +L+E+ A++ Sbjct: 257 RHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIHAVHE-VLEEIDAHD 309 >gi|256088307|ref|XP_002580284.1| developmentally regulated GTP-binding protein 1 (drg 1) [Schistosoma mansoni] gi|238665830|emb|CAZ36523.1| developmentally regulated GTP-binding protein 1 (drg 1), putative [Schistosoma mansoni] Length = 332 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L ++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 63 ARIGFVGFPSVGKSTLLCNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + ++L ++ L+ Sbjct: 123 AKDGKGRGRQVIAVARTCTLILMVLDVLK 151 >gi|146310021|ref|YP_001175095.1| putative GTPase HflX [Enterobacter sp. 638] gi|145316897|gb|ABP59044.1| GTP-binding protein HflX [Enterobacter sp. 638] Length = 426 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNQITNAEVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLHI+ A L+EN+ A +L+E+ A + Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHIIDAADFRLQENIDAV-NTVLEEIEADDIP---- 311 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID ++ +++ + + S+ TG G+P + + L +++ Sbjct: 312 -TLLVMNKIDMLEDFEPRIDRDD---ENKPIRVWLSAQTGVGVPLLFQALTERL 361 >gi|330801842|ref|XP_003288932.1| hypothetical protein DICPUDRAFT_79695 [Dictyostelium purpureum] gi|325081024|gb|EGC34556.1| hypothetical protein DICPUDRAFT_79695 [Dictyostelium purpureum] Length = 364 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 9/103 (8%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L +T + A Y FTTL G+++ L D PGII+ Sbjct: 63 ARVALIGFPSVGKSTILTKLTETESLAAAYEFTTLTCIPGVIQYHGARIQLLDTPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA---------LEENVQA 253 A QG G G + + ++L ++ A LEE ++A Sbjct: 123 ASQGRGRGRQVISVARTADLILMMLDANKGEIQKRLLEEELEA 165 >gi|118431084|ref|NP_147290.2| putative GTP-binding protein [Aeropyrum pernix K1] gi|116062410|dbj|BAA79475.2| putative GTP-binding protein [Aeropyrum pernix K1] Length = 341 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 39/59 (66%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I + G P++GKST + +V+RAKPK+ADYPFTT ++G + G + D PG++ + Sbjct: 164 IIVSGPPSSGKSTLVKNVSRAKPKVADYPFTTKQIHIGHFEAGEGRVQVVDTPGLLDRS 222 >gi|255513328|gb|EET89594.1| small GTP-binding protein [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 366 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 7/115 (6%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPF--TTLYPNLGIVKEGYKEFILADIPGII 217 A + ++G P+AGKST L ++ +K K Y F TT+ P + + + + + D+PGII Sbjct: 65 ATVALVGFPSAGKSTILNALANSKSKTGYYAFTTTTIIPGTMLYNDAHIQVL--DMPGII 122 Query: 218 KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 +NAH+G G G + + +L+ ++ N +L EL+A + KK Sbjct: 123 ENAHEGYGGGVAVIAQMKVVDLLVFVIDV---NSIDQLGMLLKELNALQIFVNKK 174 >gi|295657827|ref|XP_002789479.1| GTP-binding protein RBG1 [Paracoccidioides brasiliensis Pb01] gi|226283813|gb|EEH39379.1| GTP-binding protein RBG1 [Paracoccidioides brasiliensis Pb01] Length = 442 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 47/86 (54%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + ADY FTTL G V + + D+PGII+ Sbjct: 64 VASVGFIGFPSVGKSTLMSKLTGQHSEAADYEFTTLTTVPGQVIYNGAKIQMLDLPGIIQ 123 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 124 GAKDGKGRGRQVIAVAKTCHLIFIVL 149 >gi|213514580|ref|NP_001134621.1| developmentally-regulated GTP-binding protein 1 [Salmo salar] gi|209734742|gb|ACI68240.1| Developmentally-regulated GTP-binding protein 1 [Salmo salar] Length = 376 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 74 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 133 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I EL + L K+ +G Sbjct: 134 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKLIEHELEGFGIRLNKQPPNIGFK 191 Query: 280 QID 282 + D Sbjct: 192 KKD 194 >gi|325116545|emb|CBZ52099.1| GTP-binding protein 1, related [Neospora caninum Liverpool] Length = 367 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G++G P+ GKST L +T ++A Y FTTL G+ K + L D+PGII+ Sbjct: 65 ARVGLVGFPSVGKSTLLNKLTGTFSEVAAYEFTTLTCVPGVFKYKGAKVQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + ++L ++ ++ Q I EL + L KK Sbjct: 125 AKDGKGRGKQVIGVARTCSLILIVLDVMKPITHK--QIIERELEGFGIRLNKK 175 >gi|91773505|ref|YP_566197.1| small GTP-binding protein [Methanococcoides burtonii DSM 6242] gi|91712520|gb|ABE52447.1| GTP binding protein with TGS domain [Methanococcoides burtonii DSM 6242] Length = 363 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 5/111 (4%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L +T A ++ DY FTTL G++ + D+PG+++ Sbjct: 62 ATVALVGFPSVGKSTLLNKITGANSEVGDYEFTTLDVIPGVLDYKDATIQVLDVPGLVRG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR 270 A G G G + ++++L ++ + Y+ ++ EL Y++ +R Sbjct: 122 AASGRGRGREVIAVVRNSNLVLFLLDVFQPE---HYKVLIQEL--YDAGIR 167 >gi|290473402|ref|YP_003466268.1| putative GTPase subunit of protease with nucleoside triP hydrolase domain, together with HflC-HflK involved in stability of phage lambda cII repressor [Xenorhabdus bovienii SS-2004] gi|289172701|emb|CBJ79472.1| putative GTPase subunit of protease with nucleoside triP hydrolase domain, together with HflC-HflK involved in stability of phage lambda cII repressor [Xenorhabdus bovienii SS-2004] Length = 426 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 23/180 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKS+ +T A+ AD F TL P L + +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSSLFNRITSAEVYTADQLFATLDPTLRRIDVNDVGTVVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH+V A L+EN+ A +L+E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQARLLLHVVDAADSRLDENI-VAVDSVLEEIEAN------- 308 Query: 273 IEIVGLSQIDTVD--SDTLARKKNELATQCGQVPFEFSSITGHGIP---QIL-ECLHDKI 326 EI L ++ +D D + R + + +V S+ TG GIP Q+L ECL +I Sbjct: 309 -EIPSLLVMNKIDMLEDFVPRIDRDEENRPIRV--WLSAQTGAGIPLLFQVLTECLSGEI 365 >gi|256088305|ref|XP_002580283.1| developmentally regulated GTP-binding protein 1 (drg 1) [Schistosoma mansoni] gi|238665829|emb|CAZ36522.1| developmentally regulated GTP-binding protein 1 (drg 1), putative [Schistosoma mansoni] Length = 366 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L ++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 63 ARIGFVGFPSVGKSTLLCNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + ++L ++ L+ Sbjct: 123 AKDGKGRGRQVIAVARTCTLILMVLDVLK 151 >gi|159484284|ref|XP_001700188.1| GTP-binding protein [Chlamydomonas reinhardtii] gi|158272504|gb|EDO98303.1| GTP-binding protein [Chlamydomonas reinhardtii] Length = 405 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 47/85 (55%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKS+ L +T + + A Y FTTL G++ + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSSLLTELTGTESEAAAYEFTTLTCIPGVIHYNDSKIQLLDLPGIIEGAA 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSA 246 +G G G + + + +LL ++ A Sbjct: 125 EGKGRGRQVIAVCKSADLLLMVLDA 149 >gi|271502152|ref|YP_003335178.1| GTP-binding proten HflX [Dickeya dadantii Ech586] gi|270345707|gb|ACZ78472.1| GTP-binding proten HflX [Dickeya dadantii Ech586] Length = 433 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST +T A AD F TL P L ++ + + +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRMTAADVYAADQLFATLDPTLRRIEVDDVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T +LLH+V A ++EN+ A + +L E+ A + Sbjct: 257 RDLPHDLVAAFKATLQETREATLLLHVVDASDARVDENIDAVNE-VLAEIEADDIPF--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +++ ++E + V S+ TG GIP + + L +++ Sbjct: 313 --LLVMNKIDRLENIAPRIDRDE---ENRPVRVWLSAQTGEGIPLLFQALTERL 361 >gi|70942438|ref|XP_741385.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56519732|emb|CAH81946.1| hypothetical protein PC000093.05.0 [Plasmodium chabaudi chabaudi] Length = 116 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 36/59 (61%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 A + +IG P+ GKST L+ +T ++ADY FTTL GI+ + L D+PGII+ Sbjct: 57 ARVCLIGFPSVGKSTLLSKITNTTSEVADYEFTTLTCKPGIINHKDSKIQLLDLPGIIQ 115 >gi|238784773|ref|ZP_04628775.1| GTP-binding protein hflX [Yersinia bercovieri ATCC 43970] gi|238714286|gb|EEQ06296.1| GTP-binding protein hflX [Yersinia bercovieri ATCC 43970] Length = 428 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 17/175 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKS+ +T A AD F TL P L + + +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSSLFNKITAADVYAADQLFATLDPTLRRINVADVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENV---QAAYQCILDELSAYNSELRKKI 273 ++ H L+ T + +LLHI+ A + V AA +L E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQASLLLHIIDAADPRVTENMAAVDAVLAEIEADEIP----- 311 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQILECLHDKI 326 ++ +++ID +D +NE +P S+ TG GIP + + L +++ Sbjct: 312 TLLVMNKIDLLDDFVPRIDRNE-----DNLPVRVWLSAQTGAGIPLLFQALTERL 361 >gi|238795254|ref|ZP_04638837.1| GTP-binding protein hflX [Yersinia intermedia ATCC 29909] gi|238725422|gb|EEQ16993.1| GTP-binding protein hflX [Yersinia intermedia ATCC 29909] Length = 427 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 17/175 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I + ++G NAGKS+ +T A AD F TL P L I + +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSSLFNKITAADVYAADKLFATLDPTLRRISVADVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKI 273 ++ H L+ T + +LLHI+ A + V AA +L E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQASLLLHIIDAADPRVTENIAAVNSVLAEIEADEIP----- 311 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQILECLHDKI 326 ++ +++ID +D +NE +P S+ TG GIP + + L +++ Sbjct: 312 TLLVMNKIDLLDDFVPRIDRNE-----DNLPVRVWLSAQTGAGIPLLFQALTERL 361 >gi|156380796|ref|XP_001631953.1| predicted protein [Nematostella vectensis] gi|156219002|gb|EDO39890.1| predicted protein [Nematostella vectensis] Length = 365 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L ++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 63 ARIGFVGFPSVGKSTLLTNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT L+ IV Sbjct: 123 AKDGKGRGRQVIA-VARTCSLIFIV 146 >gi|134112892|ref|XP_774989.1| hypothetical protein CNBF1530 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257637|gb|EAL20342.1| hypothetical protein CNBF1530 [Cryptococcus neoformans var. neoformans B-3501A] Length = 382 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 49/87 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+ T+ + + Y FTTL G+++ L D+PGI+++ Sbjct: 77 ARVCMIGFPSVGKSTLLSKTTKTESVVGAYEFTTLTAIPGVLEYEGARIQLLDLPGIVQD 136 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 A +G G G + + + ++L ++ A Sbjct: 137 AAKGRGRGRQVVSVAKTADLILLLIDA 163 >gi|302392990|ref|YP_003828810.1| GTP-binding proten HflX [Acetohalobium arabaticum DSM 5501] gi|302205067|gb|ADL13745.1| GTP-binding proten HflX [Acetohalobium arabaticum DSM 5501] Length = 606 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 8/176 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNA 220 I ++G NAGKST L +T A D F TL N +K ++ +++D G I+ Sbjct: 382 ISLVGYTNAGKSTLLNRLTEATAVTKDELFATLDSNTCRLKLPVGRKVLISDTVGFIRKL 441 Query: 221 -HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 HQ L+ +LLH+V E + +A +++ LS N L K I I L+ Sbjct: 442 PHQLIAAFRATLEEVTEADILLHVVDVTEADYKAKMDAVVEVLSELNV-LDKPI-ITILN 499 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 +ID + +K+ EL Q + S+ G G+ ++L+ + + + E E Sbjct: 500 KIDLLKD----QKQVELIQQNLKNSLVISAKEGQGVDRLLDEISNLLLDTMVELEL 551 >gi|146183354|ref|XP_001025967.2| GTP1/OBG family protein [Tetrahymena thermophila] gi|146143618|gb|EAS05722.2| GTP1/OBG family protein [Tetrahymena thermophila SB210] Length = 367 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G+IG P+ GKST L +T + KIA Y FTTL G V + L D+PGII+ Sbjct: 64 ARVGMIGFPSVGKSTLLTKLTGTESKIAAYEFTTLTCIPGNVFYKGSKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT L+ IV Sbjct: 124 AKDGKGRGKQVIA-VARTCNLICIV 147 >gi|238797607|ref|ZP_04641104.1| GTP-binding protein hflX [Yersinia mollaretii ATCC 43969] gi|238718604|gb|EEQ10423.1| GTP-binding protein hflX [Yersinia mollaretii ATCC 43969] Length = 433 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 17/175 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKS+ +T A AD F TL P L + + +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSSLFNKITAADVYAADQLFATLDPTLRRINVADVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENV---QAAYQCILDELSAYNSELRKKI 273 ++ H L+ T + +LLHI+ A + V AA +L E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQASLLLHIIDAADPRVTENMAAVDTVLAEIEADEIP----- 311 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQILECLHDKI 326 ++ +++ID +D +NE +P S+ TG GIP + + L +++ Sbjct: 312 TLLVMNKIDLLDDFVPRIDRNE-----DNLPVRVWLSAQTGAGIPLLFQALTERL 361 >gi|50306503|ref|XP_453225.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49642359|emb|CAH00321.1| KLLA0D03608p [Kluyveromyces lactis] Length = 393 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 27/134 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTL----------YPNLGIVKEGYK--- 206 GI+GL N GKSTF ++TR P A+YPF T+ P + E YK Sbjct: 24 GIVGLANVGKSTFFQAITRCPLGNP--ANYPFATIDPEEARVIVPSPRFDTLSEIYKPAS 81 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCI 258 + DI G+ K A G G+G+ FL H + +V ++ +++ + Sbjct: 82 KVPAHLTVYDIAGLTKGASAGEGLGNAFLSHIRSVDSIYQVVRCFDDAEIIHIEGDVDPV 141 Query: 259 LDELSAYNSELRKK 272 D L N+ELR K Sbjct: 142 RD-LDIINTELRLK 154 >gi|167470109|ref|ZP_02334813.1| GTP-binding protein HflX [Yersinia pestis FV-1] Length = 435 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 17/175 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKS+ +T A AD F TL P L + + +LAD G I Sbjct: 204 IPTVSLVGYTNAGKSSLFNKITAADVYAADQLFATLDPTLRRINVADVGDTVLADTVGFI 263 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENV---QAAYQCILDELSAYNSELRKKI 273 ++ H L+ T + +LLHI+ A + V AA +L E+ A Sbjct: 264 RHLPHDLVAAFKATLQETRQASLLLHIIDAADPRVAENMAAVDTVLAEIEADEIP----- 318 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQILECLHDKI 326 ++ +++ID +D +NE +P S+ TG GIP + + L +++ Sbjct: 319 TLLVMNKIDLLDDFVPRIDRNE-----DNLPVRVWLSAQTGAGIPLLFQALTERL 368 >gi|156402307|ref|XP_001639532.1| predicted protein [Nematostella vectensis] gi|156226661|gb|EDO47469.1| predicted protein [Nematostella vectensis] Length = 360 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 25/108 (23%) Query: 164 IIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLG------------IVKEG------ 204 ++G P+AGKSTF + T+ + ++A +PFTT+ PN+G + K+ Sbjct: 1 LLGKPSAGKSTFFNAATQQNRARVASHPFTTIEPNIGRGFYAIPCPCGTLSKQCNAAYGH 60 Query: 205 ------YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 Y IL D+ G++ A +G G G++F+ VL+H++ A Sbjct: 61 ADNGDRYVPVILKDVAGLVPGACEGRGKGNKFMNDLLDADVLIHVIDA 108 >gi|156085980|ref|XP_001610399.1| developmentally regulated GTP-binding protein 1 [Babesia bovis T2Bo] gi|154797652|gb|EDO06831.1| developmentally regulated GTP-binding protein 1, putative [Babesia bovis] Length = 366 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 47/87 (54%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G++G P+ GKST L +T ++A Y FTTL G+ K + L D+PGII+ Sbjct: 64 ARVGLVGFPSVGKSTLLNKLTGTYSEVAAYEFTTLTCVPGVFKYKGSKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 A G G G + + ++L ++ A Sbjct: 124 AKDGKGRGKQVIAVARTCSLILVVLDA 150 >gi|153217190|ref|ZP_01950954.1| GTP-binding protein HflX [Vibrio cholerae 1587] gi|153803483|ref|ZP_01958069.1| GTP-binding protein HflX [Vibrio cholerae MZO-3] gi|153827316|ref|ZP_01979983.1| GTP-binding protein HflX [Vibrio cholerae MZO-2] gi|153830894|ref|ZP_01983561.1| GTP-binding protein HflX [Vibrio cholerae 623-39] gi|229512374|ref|ZP_04401849.1| GTP-binding protein HflX [Vibrio cholerae TMA 21] gi|229526912|ref|ZP_04416315.1| GTP-binding protein HflX [Vibrio cholerae bv. albensis VL426] gi|297582276|ref|ZP_06944190.1| GTP-binding protein HflX [Vibrio cholerae RC385] gi|124113773|gb|EAY32593.1| GTP-binding protein HflX [Vibrio cholerae 1587] gi|124120984|gb|EAY39727.1| GTP-binding protein HflX [Vibrio cholerae MZO-3] gi|148873628|gb|EDL71763.1| GTP-binding protein HflX [Vibrio cholerae 623-39] gi|149738782|gb|EDM53124.1| GTP-binding protein HflX [Vibrio cholerae MZO-2] gi|229336081|gb|EEO01100.1| GTP-binding protein HflX [Vibrio cholerae bv. albensis VL426] gi|229350589|gb|EEO15534.1| GTP-binding protein HflX [Vibrio cholerae TMA 21] gi|297533495|gb|EFH72342.1| GTP-binding protein HflX [Vibrio cholerae RC385] gi|327483210|gb|AEA77617.1| GTP-binding protein HflX [Vibrio cholerae LMA3894-4] Length = 429 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 23/180 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL---GIVKEGYKEFILADIPG 215 I I ++G NAGKST +T A AD F TL P L +V G +LAD G Sbjct: 197 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIDLVDVGPA--VLADTVG 254 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELR 270 I++ H L+ T+ +LLH+V A EN+QA + +L E+ A+ Sbjct: 255 FIRHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAV-ETVLQEIDAHEVPT- 312 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFS 328 ++ +++ID ++ + ++++ VP S++ G GI + E L +++ S Sbjct: 313 ----LLVMNKIDNLEEQSPRIERDDEG-----VPRVVWISAMQGAGIELLFEALSERLAS 363 >gi|229519943|ref|ZP_04409374.1| GTP-binding protein HflX [Vibrio cholerae TM 11079-80] gi|229343071|gb|EEO08058.1| GTP-binding protein HflX [Vibrio cholerae TM 11079-80] Length = 429 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 23/180 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL---GIVKEGYKEFILADIPG 215 I I ++G NAGKST +T A AD F TL P L +V G +LAD G Sbjct: 197 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIDLVDVGPA--VLADTVG 254 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELR 270 I++ H L+ T+ +LLH+V A EN+QA + +L E+ A+ Sbjct: 255 FIRHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAV-ETVLQEIDAHEVPT- 312 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFS 328 ++ +++ID ++ + ++++ VP S++ G GI + E L +++ S Sbjct: 313 ----LLVMNKIDNLEEQSPRIERDDEG-----VPRVVWISAMQGAGIELLFEALSERLAS 363 >gi|224093876|ref|XP_002310030.1| predicted protein [Populus trichocarpa] gi|222852933|gb|EEE90480.1| predicted protein [Populus trichocarpa] Length = 368 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 49/89 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G++G P+ GKST L +T ++A Y FTTL G++ + L D+PGII+ Sbjct: 65 ARVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVIVYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + + +L ++ A++ Sbjct: 125 AKDGKGRGRQVISTARTCNCILIVLDAIK 153 >gi|254577113|ref|XP_002494543.1| ZYRO0A03960p [Zygosaccharomyces rouxii] gi|238937432|emb|CAR25610.1| ZYRO0A03960p [Zygosaccharomyces rouxii] Length = 393 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 60/134 (44%), Gaps = 27/134 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTLYPNLGIV----------KEGYK--- 206 GI+GL N GKSTF S+TR+ P A+YPF T+ P V E YK Sbjct: 24 GIVGLANVGKSTFFQSITRSPLGNP--ANYPFATIEPEEARVIVPSPRFDNLCEIYKPAS 81 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCI 258 + DI G+ K A G G+G+ FL H + +V ++ +++ I Sbjct: 82 QVPAHLTVYDIAGLTKGASAGEGLGNAFLSHIRAVDSIYQVVRCFDDAEIVHIEGDVDPI 141 Query: 259 LDELSAYNSELRKK 272 D L N ELR K Sbjct: 142 RD-LQIINEELRLK 154 >gi|255087856|ref|XP_002505851.1| predicted protein [Micromonas sp. RCC299] gi|226521121|gb|ACO67109.1| predicted protein [Micromonas sp. RCC299] Length = 551 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 35/120 (29%) Query: 162 IGIIGLPNAGKSTF------LASVTRAKPKIADYPFTTLYPNLG---------IVKEGYK 206 +G++G P+AGKSTF LA R + A +PFTT+ PN+G G + Sbjct: 134 VGLVGKPSAGKSTFFNAARELAETDRGAARCAPHPFTTIEPNVGRAFAPVPCPCAAAGLR 193 Query: 207 --------------------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 ++ D+ G++ AH G G G+ FL VL+H+V A Sbjct: 194 GTCDPAHGSEDVDGEHCRRIPVLVKDVAGLVPGAHAGRGRGNAFLNDLCDADVLVHVVDA 253 >gi|222480706|ref|YP_002566943.1| GTP-binding protein HSR1-related [Halorubrum lacusprofundi ATCC 49239] gi|222453608|gb|ACM57873.1| GTP-binding protein HSR1-related [Halorubrum lacusprofundi ATCC 49239] Length = 328 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 19/101 (18%) Query: 155 KLKLIADIG-------IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE 207 +LK++ DI I G PN GKS+F+ VTRA +IA+YPFTT +G + + Sbjct: 146 QLKVLPDIRPDEPAIVIAGYPNVGKSSFVNRVTRASNQIAEYPFTTKGVQIGHFERDHVR 205 Query: 208 FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + + D PG++ DR ER + VSALE Sbjct: 206 YQIVDTPGLL----------DR--PEDERNDIERQAVSALE 234 >gi|332292384|ref|YP_004430993.1| GTP-binding protein Era [Krokinobacter diaphorus 4H-3-7-5] gi|332170470|gb|AEE19725.1| GTP-binding protein Era [Krokinobacter diaphorus 4H-3-7-5] Length = 294 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 56/166 (33%), Positives = 83/166 (50%), Gaps = 20/166 (12%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + A V I TT + LGIV + +L+D PGIIK A Sbjct: 8 VNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQMLLSDTPGIIKPA 67 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR-KKIEIVGL 278 ++ F+K E VLL+IV E+ ++ DE A+ +++R KI ++ L Sbjct: 68 YELQASMMDFVKSAFEDADVLLYIVELGEKELK-------DE--AFFNKIRGSKIPVLLL 118 Query: 279 -SQIDTVDSDTLARKKNELATQCGQVP----FEFSSITGHGIPQIL 319 ++ID + DTLA L +VP F S++ G+PQ+ Sbjct: 119 INKIDKGNEDTLAEA---LKLWSEKVPNAEVFAISALESFGVPQVF 161 >gi|218245160|ref|YP_002370531.1| GTP-binding proten HflX [Cyanothece sp. PCC 8801] gi|218165638|gb|ACK64375.1| GTP-binding proten HflX [Cyanothece sp. PCC 8801] Length = 564 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 21/148 (14%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKE---FILAD 212 + + I+G NAGKST + ++T+A AD F TL P L +V+ E +L D Sbjct: 394 VPSVAIVGYTNAGKSTLINALTKADVYTADQLFATLDPTTRRLQVVEPTTGESTTLLLTD 453 Query: 213 IPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVS----ALEENVQAAYQCILDELSAY 265 G I + D F L+ LLH+V A E +++ IL+E+S Sbjct: 454 TVGFIHEL--PPSLVDAFRATLEEVTEADALLHVVDLSHPAWEHQIESVM-TILEEIS-- 508 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKK 293 L + ++ ++ID VDSDTL R K Sbjct: 509 ---LTPGVILLAFNKIDQVDSDTLERAK 533 >gi|225438553|ref|XP_002279867.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296082507|emb|CBI21512.3| unnamed protein product [Vitis vinifera] Length = 368 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 48/87 (55%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +G++G P+ GKST L +T ++A Y FTTL G++ + L D+PGII+ A Sbjct: 67 VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIEGAK 126 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALE 248 G G G + + + +L ++ A++ Sbjct: 127 DGKGRGRQVISTARTCNCILIVLDAIK 153 >gi|212704395|ref|ZP_03312523.1| hypothetical protein DESPIG_02450 [Desulfovibrio piger ATCC 29098] gi|212672116|gb|EEB32599.1| hypothetical protein DESPIG_02450 [Desulfovibrio piger ATCC 29098] Length = 544 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 19/173 (10%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAH 221 ++G NAGKST L ++TR++ + F TL P ++ +E ILAD G I+N Sbjct: 366 ALVGYTNAGKSTLLNNLTRSEVLAENKLFATLDPTTRRLRFPAEREIILADTVGFIRNLP 425 Query: 222 QGAGIGDRF---LKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKIEI 275 + + D F L+ E +L+H+ A ++ + + IL+EL EL+ I Sbjct: 426 K--ELMDAFRATLEELESADLLVHVADASHPDLLQQITSVETILEEL-----ELQHMPRI 478 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 + L++ D +D + ELA S+ TG G+ ++LE L + + S Sbjct: 479 LLLNKWDLLDVPA----RAELADAFPHA-IPISARTGDGLKRLLEVLENMLLS 526 >gi|257058186|ref|YP_003136074.1| GTP-binding proten HflX [Cyanothece sp. PCC 8802] gi|256588352|gb|ACU99238.1| GTP-binding proten HflX [Cyanothece sp. PCC 8802] Length = 564 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 21/148 (14%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKE---FILAD 212 + + I+G NAGKST + ++T+A AD F TL P L +V+ E +L D Sbjct: 394 VPSVAIVGYTNAGKSTLINALTKADVYTADQLFATLDPTTRRLQVVEPTTGESTTLLLTD 453 Query: 213 IPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVS----ALEENVQAAYQCILDELSAY 265 G I + D F L+ LLH+V A E +++ IL+E+S Sbjct: 454 TVGFIHEL--PPSLVDAFRATLEEVTEADALLHVVDLSHPAWEHQIESVM-TILEEIS-- 508 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKK 293 L + ++ ++ID VDSDTL R K Sbjct: 509 ---LTPGVILLAFNKIDQVDSDTLERAK 533 >gi|291232131|ref|XP_002735973.1| PREDICTED: developmentally-regulated GTP-binding protein 1-like [Saccoglossus kowalevskii] Length = 365 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 49/89 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 63 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + ++L ++ L+ Sbjct: 123 AKDGKGRGRQVIAVARTCSLILIVLDVLK 151 >gi|289724756|gb|ADD18332.1| GTP-binding protein DRG2 [Glossina morsitans morsitans] Length = 350 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 4/114 (3%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 47 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 106 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-ELSAYNSELRKK 272 A G G G + + +++ ++ L+ A++ +L+ EL + L KK Sbjct: 107 AKDGKGRGRQVIAVARTCNLIFMVLDCLKP---LAHKKLLEHELEGFGIRLNKK 157 >gi|50405689|ref|XP_456483.1| DEHA2A03212p [Debaryomyces hansenii CBS767] gi|49652147|emb|CAG84435.1| DEHA2A03212p [Debaryomyces hansenii] Length = 396 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 57/140 (40%), Gaps = 32/140 (22%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTLYPNLGIVKEGYKEF----------- 208 GI+GL N GKSTF ++TR P A+YPF T+ P V F Sbjct: 25 GIVGLANVGKSTFFQAITRCPLGNP--ANYPFATIEPEEARVIVPSSRFNKLVDIYKPKS 82 Query: 209 ------ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQ 252 + DI G+ K AH G G+G+ FL + + +V E+ N Sbjct: 83 EVPAYMTIYDIAGLTKGAHAGEGLGNNFLANIRAVDAIFQVVRCFEDADIIHINDEVNPA 142 Query: 253 AAYQCILDELSAYNSELRKK 272 A + + DEL + E K Sbjct: 143 ADLEIVHDELRLKDIEFATK 162 >gi|332798589|ref|YP_004460088.1| GTP-binding protein YchF [Tepidanaerobacter sp. Re1] gi|332696324|gb|AEE90781.1| GTP-binding protein YchF [Tepidanaerobacter sp. Re1] Length = 361 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 17/103 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 +G++GLP GK+TF +T AK + + + + N + K Sbjct: 3 VGLVGLPTVGKTTFFNLLTNAKVETSAFQSGKINANFSLARVPDERVDFLAEVYKPKKVT 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 Y + + DIPG++ A +G G G++FL + + L+HIV A Sbjct: 63 YAQIEVIDIPGLVSGASEGKGSGNQFLDNIRKVDCLVHIVRAF 105 >gi|225682390|gb|EEH20674.1| GTP-binding protein 128up [Paracoccidioides brasiliensis Pb03] Length = 368 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 47/86 (54%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + ADY FTTL G V + + D+PGII+ Sbjct: 64 VASVGFIGFPSVGKSTLMSKLTGQHSEAADYEFTTLTTVPGQVIYNGAKIQMLDLPGIIQ 123 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 124 GAKDGKGRGRQVIAVAKTCHLIFIVL 149 >gi|114564471|ref|YP_751985.1| GTP-binding protein, HSR1-related [Shewanella frigidimarina NCIMB 400] gi|114335764|gb|ABI73146.1| GTP-binding protein, HSR1-related [Shewanella frigidimarina NCIMB 400] Length = 435 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 4/110 (3%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A + ++G NAGKST ++T + AD F TL P L + ILAD G I+ Sbjct: 197 LATVSLVGYTNAGKSTLFNALTSSDVYAADQLFATLDPTLRKLSLPDGAVILADTVGFIR 256 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY---QCILDELSA 264 + H L+ T + +LLH+V ++N+ + Q +L+E+ A Sbjct: 257 HLPHDLVAAFKATLQETRQAEILLHVVDCADDNMTENFDQVQKVLEEIDA 306 >gi|302684249|ref|XP_003031805.1| hypothetical protein SCHCODRAFT_76703 [Schizophyllum commune H4-8] gi|300105498|gb|EFI96902.1| hypothetical protein SCHCODRAFT_76703 [Schizophyllum commune H4-8] Length = 393 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 22/137 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVK----------EGYKE--- 207 +GI+GLPN GKSTF ++T K A++P+ T+ P + E YK Sbjct: 24 VGIVGLPNVGKSTFFNALTNTDLGKAANFPYATINPEEARIPVPDERFDWLCELYKPQNK 83 Query: 208 ----FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 DI G+ A GAG+G+ FL H + +V A ++ + +D L Sbjct: 84 VPAFLTCLDIAGLTAGASTGAGLGNSFLSHVRAVDGIFQVVRAFDDAEVTHVEGDVDPLR 143 Query: 264 AYN---SELR-KKIEIV 276 + +ELR K IE V Sbjct: 144 DMDIISTELRLKDIEWV 160 >gi|158425774|ref|YP_001527066.1| GTP-dependent nucleic acid-binding protein EngD [Azorhizobium caulinodans ORS 571] gi|158332663|dbj|BAF90148.1| conserved hypothetical protein 92 [Azorhizobium caulinodans ORS 571] Length = 365 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A A + A+YPF T+ PN+G V G + I Sbjct: 6 GIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGDVAVPDPRLTALAEIAGSGQII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+++ A +G G+G++FL + + H+V E+ Sbjct: 66 PTRLTFVDIAGLVRGASKGEGLGNQFLANIRECDAIAHVVRCFED 110 >gi|242399342|ref|YP_002994766.1| Predicted GTPase, containing NOG1 domain [Thermococcus sibiricus MM 739] gi|242265735|gb|ACS90417.1| Predicted GTPase, containing NOG1 domain [Thermococcus sibiricus MM 739] Length = 351 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 26/59 (44%), Positives = 38/59 (64%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + I I G PN GKST L +T AKP++A YPFTT N+G +E + ++ + D PG++ Sbjct: 167 LPTIVIAGHPNVGKSTLLRKLTNAKPEVATYPFTTKGINVGQFEEHWLKYQVIDTPGLL 225 >gi|321462598|gb|EFX73620.1| hypothetical protein DAPPUDRAFT_307651 [Daphnia pulex] Length = 367 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 2/121 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L ++ ++A Y FTTL G ++ + L D+PGII+ Sbjct: 64 ARIGFVGFPSVGKSTLLTTLAGVYSEVAAYEFTTLTTVPGCIRYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + RT L+ IV + + +Q + I EL + L K+ +G Sbjct: 124 AKDGKGRGRQVIA-VARTCSLIFIVLDVLKPLQHK-KIIQRELEGFGIRLNKQPPNIGFR 181 Query: 280 Q 280 + Sbjct: 182 R 182 >gi|254446956|ref|ZP_05060423.1| GTP-binding proten HflX [gamma proteobacterium HTCC5015] gi|198263095|gb|EDY87373.1| GTP-binding proten HflX [gamma proteobacterium HTCC5015] Length = 448 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 10/171 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 + + ++G NAGKST +T A+ D F TL P L +V +E +LAD G I Sbjct: 209 VPTVSLVGYTNAGKSTLFNHITNAEVFAQDQLFATLDPTLRRLVLPDKREMVLADTVGFI 268 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ H L+ TE +LLH++ ++ + Q + D L+ ++ +I + Sbjct: 269 RDLPHDLVAAFRSTLQETEEASLLLHVIDVADDERELRMQEVEDVLALIGADSVPQIRVY 328 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHDKI 326 ++ID + R + G+V S+ TG G+ +++ L D + Sbjct: 329 --NKIDQTERSPELR-----YGENGEVSEVYLSAHTGEGLEELMTALMDAL 372 >gi|149007713|ref|ZP_01831322.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74] gi|147760708|gb|EDK67680.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74] Length = 88 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 17/77 (22%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V K Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVP 65 Query: 206 KEFILADIPGIIKNAHQ 222 F DI GI+K A + Sbjct: 66 TTFEFTDIAGIVKGASK 82 >gi|302349103|ref|YP_003816741.1| Putative GTP-binding protein [Acidilobus saccharovorans 345-15] gi|302329515|gb|ADL19710.1| Putative GTP-binding protein [Acidilobus saccharovorans 345-15] Length = 338 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 26/140 (18%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PNAGKSTFL+SV+RA+P+IA YPFTT +G E + D PG++ Sbjct: 173 VSGPPNAGKSTFLSSVSRARPEIAPYPFTTKNVIVGHANVDGVEVQVIDTPGLL------ 226 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEE-------NVQAAYQCILDELSAYN--SELRKKI- 273 DR ++ V L V+AL+E V + LD S + S +R + Sbjct: 227 ----DR--DPSQMNEVELRAVAALQELPGPVLYLVDPTPEAPLDLESQVSLLSRIRAMLG 280 Query: 274 ----EIVGLSQIDTVDSDTL 289 +V ++++D VDS+ L Sbjct: 281 GSRRVLVVINKVDAVDSNRL 300 >gi|298292449|ref|YP_003694388.1| GTP-binding protein YchF [Starkeya novella DSM 506] gi|296928960|gb|ADH89769.1| GTP-binding protein YchF [Starkeya novella DSM 506] Length = 365 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A A + A+YPF T+ PN+G V G + I Sbjct: 6 GIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGDVAVPDARLETLAKIAGSGQII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+++ A +G G+G++FL + + H+V E+ Sbjct: 66 PTRLTFVDIAGLVRGASKGEGLGNQFLANIRECDAIAHVVRCFED 110 >gi|257470080|ref|ZP_05634172.1| GTP-binding protein Era [Fusobacterium ulcerans ATCC 49185] gi|317064304|ref|ZP_07928789.1| GTP binding protein [Fusobacterium ulcerans ATCC 49185] gi|313689980|gb|EFS26815.1| GTP binding protein [Fusobacterium ulcerans ATCC 49185] Length = 297 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 9/166 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST + + K I T N+ GI+ ++I D PGI K Sbjct: 6 IAVVGRPNVGKSTLINKLVSEKVAIVSDKAGTTRDNIKGILNLNNNQYIFIDTPGIHKAK 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H G + + ++ + V+L ++ +E + Q +++ + E +K I+ ++ Sbjct: 66 HLLGEYMTNSAIRVLKDVDVILFLLDGSQE-ISTGDQFVMERV----MEAKKTPRILVIN 120 Query: 280 QIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLH 323 +ID + + LA K+ E+ + G+ E S G+P++LE + Sbjct: 121 KIDKLSDEQLAAKREEVKEKLGEFDGIVEISGQYAFGLPRLLEAIE 166 >gi|55379046|ref|YP_136896.1| GTP-binding protein [Haloarcula marismortui ATCC 43049] gi|55231771|gb|AAV47190.1| GTP-binding protein [Haloarcula marismortui ATCC 43049] Length = 331 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 13/116 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ VTRA +IA YPFTT +G ++ + L D PG++ Sbjct: 171 IVVAGYPNVGKSSFVNRVTRADNEIASYPFTTTQIRVGHFEDQRIRYQLVDTPGLLDRPP 230 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNSELRKKIE 274 + DR ++ L H+ A+ + + +C + D+L ELR IE Sbjct: 231 E-----DRNEIESQAVSALEHLADAVLVFIDPSGECGYPLADQL-----ELRNAIE 276 >gi|241741489|ref|XP_002414128.1| GTP-binding protein DRG2, putative [Ixodes scapularis] gi|215507982|gb|EEC17436.1| GTP-binding protein DRG2, putative [Ixodes scapularis] Length = 368 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 4/124 (3%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST + ++ ++A Y FTTL G++K + L D+PGII+ Sbjct: 64 ARIGFVGFPSVGKSTLMNTLAGVFSEVAAYEFTTLTTVPGVIKYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-ELSAYNSELRKKIEIVGL 278 A G G G + + RT L+ IV + + +Q ++ IL+ E+ + L K+ + L Sbjct: 124 AKDGKGRGRQVIA-VARTCSLIFIVLDVLKPLQ--HKRILEREVEGFGIRLNKEPPAISL 180 Query: 279 SQID 282 + D Sbjct: 181 RRKD 184 >gi|242023708|ref|XP_002432273.1| GTP-binding protein 128up, putative [Pediculus humanus corporis] gi|212517682|gb|EEB19535.1| GTP-binding protein 128up, putative [Pediculus humanus corporis] Length = 367 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 64 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + RT L+ IV + + +Q + I EL + L K+ Sbjct: 124 AKDGKGRGRQVIA-VARTCSLIFIVLDVLKPLQHK-KIIEHELEGFGLRLNKE 174 >gi|146415114|ref|XP_001483527.1| hypothetical protein PGUG_04255 [Meyerozyma guilliermondii ATCC 6260] gi|146392000|gb|EDK40158.1| hypothetical protein PGUG_04255 [Meyerozyma guilliermondii ATCC 6260] Length = 243 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 21/122 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------KEG 204 GI+GL N GKSTF ++TR A+YPF T+ P V E Sbjct: 25 GIVGLANVGKSTFFQAITRCPLGNPANYPFATIEPEEARVIVPSSRFEKLCDMYKPKSEV 84 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 + DI G+ K AH G G+G+ FL + + +V + ++ A I DE++ Sbjct: 85 RAYMTVYDIAGLTKGAHSGEGLGNNFLANIRAVDAIFQMVRSFDD---ADIIHINDEVNP 141 Query: 265 YN 266 +N Sbjct: 142 FN 143 >gi|114569306|ref|YP_755986.1| GTP-dependent nucleic acid-binding protein EngD [Maricaulis maris MCS10] gi|114339768|gb|ABI65048.1| GTP-binding protein YchF [Maricaulis maris MCS10] Length = 365 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A A + A+YPF T+ PN+G V G KE + Sbjct: 6 GIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGDVAVPEPRLAKLAEIAGSKEIL 65 Query: 210 LA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A DI G+++ A +G G+G++FL T + +++ +++ Sbjct: 66 PARMNFVDIAGLVEGASKGEGLGNQFLATIRETDAIAYVLRCFDDD 111 >gi|170728494|ref|YP_001762520.1| GTP-binding proten HflX [Shewanella woodyi ATCC 51908] gi|169813841|gb|ACA88425.1| GTP-binding proten HflX [Shewanella woodyi ATCC 51908] Length = 432 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 4/110 (3%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A + ++G NAGKST S+T + AD F TL P L + ILAD G I+ Sbjct: 197 LATVSLVGYTNAGKSTLFNSLTTSDVYAADQLFATLDPTLRKLDLDDGSIILADTVGFIR 256 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY---QCILDELSA 264 + H L+ T +LLHIV +EN+ + Q +L E+ A Sbjct: 257 HLPHDLVAAFKATLQETREADLLLHIVDCHDENMGDNFEQVQLVLKEIGA 306 >gi|313213313|emb|CBY37143.1| unnamed protein product [Oikopleura dioica] gi|313225948|emb|CBY21091.1| unnamed protein product [Oikopleura dioica] Length = 367 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 41/72 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+ +T+ + Y FTTL G+++ L D+PGII+ Sbjct: 64 ARVALIGFPSVGKSTLLSLITKTTSETGAYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFL 231 A QG G G + + Sbjct: 124 AAQGKGRGKQVI 135 >gi|255583013|ref|XP_002532275.1| developmentally regulated GTP-binding protein, putative [Ricinus communis] gi|223528035|gb|EEF30115.1| developmentally regulated GTP-binding protein, putative [Ricinus communis] Length = 368 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 49/89 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G++G P+ GKST L +T ++A Y FTTL G++ + L D+PGII+ Sbjct: 65 ARVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVIVYRGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + + +L ++ A++ Sbjct: 125 AKDGKGRGRQVISTARTCNCILIVLDAIK 153 >gi|150866840|ref|XP_001386569.2| hypothetical protein PICST_85543 [Scheffersomyces stipitis CBS 6054] gi|149388096|gb|ABN68540.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 401 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------KEG 204 G++GL N GKSTF ++T++ A+YPF T+ P +V K+ Sbjct: 39 GLVGLANVGKSTFFQAITKSTLGNPANYPFATIEPEKSLVVVPSIKLDHYQKLFGSEKKL 98 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+ +NA GAG+G++FL + + +V ++ Sbjct: 99 SSNLTIWDIAGLTRNASSGAGLGNKFLADIRQVDGIFQVVRGFRDD 144 >gi|118575546|ref|YP_875289.1| GTPase [Cenarchaeum symbiosum A] gi|118194067|gb|ABK76985.1| GTPase [Cenarchaeum symbiosum A] Length = 356 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 46/89 (51%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + IG+P+ GKST L +T A + + FTTL G+++ + D+PGIIK Sbjct: 51 ATVVFIGMPSVGKSTLLNRLTGANSAVGAFQFTTLTVVPGMMEYKGARIQILDLPGIIKG 110 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G+G R L ++L ++ + Sbjct: 111 ASGGKGLGKRILSVARSADLVLLVLDVFQ 139 >gi|121533669|ref|ZP_01665496.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1] gi|121307660|gb|EAX48575.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1] Length = 597 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 19/175 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST L ++T A D F TL P +K +E +L D G I Sbjct: 376 VPTLALVGYTNAGKSTLLNTLTNASVLAEDKLFATLDPTTRRLKLPNGQEALLTDTVGFI 435 Query: 218 -KNAHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 K HQ L+ +LLHIV A EE + + ++ +L EL A ++ Sbjct: 436 QKLPHQLIAAFRATLEEVVYADLLLHIVDASHPRYEEQMDSVFE-VLRELQADTKDI--- 491 Query: 273 IEIVGLSQIDTVDS-DTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I ++ID +++ + +AR L + G V S++TG GI +LE + +K+ Sbjct: 492 --ITVFNKIDKIENPNIIAR----LVRESGSVA--ISALTGLGIDSLLEQVQNKL 538 >gi|170750517|ref|YP_001756777.1| GTP-dependent nucleic acid-binding protein EngD [Methylobacterium radiotolerans JCM 2831] gi|170657039|gb|ACB26094.1| GTP-binding protein YchF [Methylobacterium radiotolerans JCM 2831] Length = 365 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 18/100 (18%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A A + A+YPF T+ PN+G V KE I Sbjct: 6 GIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGEVAVPDPRLTDLARIASSKEII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI G+++ A +G G+G++FL + + H+V Sbjct: 66 PTRLTFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVV 105 >gi|290992616|ref|XP_002678930.1| developmentally regulated GTP binding protein [Naegleria gruberi] gi|284092544|gb|EFC46186.1| developmentally regulated GTP binding protein [Naegleria gruberi] Length = 367 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 46/87 (52%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L +T + + Y FTTL G+++ L D+PGII+ Sbjct: 64 ARVALIGFPSVGKSTLLNKITGTESETGAYEFTTLTCIPGVIEYNGSRIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 A +G G G + + ++L ++ A Sbjct: 124 AAEGKGRGKQVIATARTADLVLMMLDA 150 >gi|258623500|ref|ZP_05718502.1| GTP-binding protein HflX [Vibrio mimicus VM573] gi|262163593|ref|ZP_06031336.1| GTP-binding protein HflX [Vibrio mimicus VM223] gi|262172554|ref|ZP_06040232.1| GTP-binding protein HflX [Vibrio mimicus MB-451] gi|258584212|gb|EEW08959.1| GTP-binding protein HflX [Vibrio mimicus VM573] gi|261893630|gb|EEY39616.1| GTP-binding protein HflX [Vibrio mimicus MB-451] gi|262027960|gb|EEY46622.1| GTP-binding protein HflX [Vibrio mimicus VM223] Length = 429 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 23/180 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL---GIVKEGYKEFILADIPG 215 I I ++G NAGKST +T A AD F TL P L +V G +LAD G Sbjct: 197 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIDLVDVGPA--VLADTVG 254 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELR 270 I++ H L+ T+ +LLH+V A EN+QA + +L E+ A+ Sbjct: 255 FIRHLPHDLVAAFKATLQETQEADILLHVVDASDDRFRENIQAV-ETVLQEIDAH----- 308 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFS 328 E+ L ++ +DS L + + +P S++ G GI + + L +++ S Sbjct: 309 ---EVPTLLVMNKIDS--LEEQAPRIERDDEGIPRVVWISAMQGSGIELLFQALSERLAS 363 >gi|212543895|ref|XP_002152102.1| nucleolar GTP-binding protein (Nog1), putative [Penicillium marneffei ATCC 18224] gi|210067009|gb|EEA21102.1| nucleolar GTP-binding protein (Nog1), putative [Penicillium marneffei ATCC 18224] Length = 660 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL S+TRA + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLRSITRADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC ++D++ +NS K+ V Sbjct: 232 MNTIE-----MQSITAIAHLRSAILYFMDLSEQCGYSVVDQVKLFNSIKPLFANKLVFVV 286 Query: 278 LSQIDTVDSDTLARKKNEL----ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + L + EL Q + S T G+ + DK+ + R Sbjct: 287 VNKIDVKRPEDLDPETKELLDSMLNQSNVEMLQLSCTTTEGVTNVKNAACDKLIAER 343 >gi|330445003|ref|ZP_08308657.1| GTP-binding proten HflX [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328493121|dbj|GAA03154.1| GTP-binding proten HflX [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 429 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L ++ ILAD G I Sbjct: 197 IPTISLVGYTNAGKSTLFNRITDAGVYAADQLFATLDPTLRKIEVADVGTAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H LK T+ +LLH+V A EN++A + +L+E+ A Sbjct: 257 RHLPHDLVAAFKATLKETQEADLLLHVVDASDDRFRENIEAV-ETVLEEIDAG------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E+ L ++ +D+ A + E + S++ G GI + + L +++ Sbjct: 309 -EVPALVVMNKIDNLEHAEPRIERDDEGVPRRVWVSAMEGQGIDLLFQALTERL 361 >gi|146340795|ref|YP_001205843.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS278] gi|146193601|emb|CAL77618.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS278] Length = 459 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 8/175 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST +TRA + AD F TL P L + + + +L+D G I N Sbjct: 228 VALVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRAISLPHGGKAMLSDTVGFISNL 287 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIV 276 Q L+ V+LH+ E+ +A + +L +L IE+ Sbjct: 288 PTQLVAAFRATLEEVLEADVILHVRDMSHEDAEAQQHDVELVLSQLGIDPEATDTIIEV- 346 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 ++ID +D N A + + P F S+ TG G+ +L+ + D++ + R Sbjct: 347 -WNKIDRLDDAARENLANIAARRPPERPCFMVSAETGEGVDALLQAIEDRLAAAR 400 >gi|258625634|ref|ZP_05720515.1| GTP-binding protein HflX [Vibrio mimicus VM603] gi|258582089|gb|EEW06957.1| GTP-binding protein HflX [Vibrio mimicus VM603] Length = 429 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 23/180 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL---GIVKEGYKEFILADIPG 215 I I ++G NAGKST +T A AD F TL P L +V G +LAD G Sbjct: 197 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIDLVDVGPA--VLADTVG 254 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELR 270 I++ H L+ T+ +LLH+V A EN+QA + +L E+ A+ Sbjct: 255 FIRHLPHDLVAAFKATLQETQEADILLHVVDASDDRFRENIQAV-ETVLQEIDAH----- 308 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFS 328 E+ L ++ +DS L + + +P S++ G GI + + L +++ S Sbjct: 309 ---EVPTLLVMNKIDS--LEEQAPRIERDDEGIPRVVWISAMQGSGIELLFQTLSERLAS 363 >gi|312378517|gb|EFR25070.1| hypothetical protein AND_09909 [Anopheles darlingi] Length = 312 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 50 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 109 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +++ ++ L+ Sbjct: 110 AKDGKGRGRQVIAVARTCNLIFMVLDVLK 138 >gi|238756927|ref|ZP_04618115.1| GTP-dependent nucleic acid-binding protein engD [Yersinia aldovae ATCC 35236] gi|238704757|gb|EEP97286.1| GTP-dependent nucleic acid-binding protein engD [Yersinia aldovae ATCC 35236] Length = 351 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 27/135 (20%) Query: 171 GKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFI-----------LADI 213 GKST ++T+A + A++PF T+ PN G+V + E + DI Sbjct: 2 GKSTLFNALTQAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRILPTTMEFVDI 61 Query: 214 PGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN--VQAAYQC-ILDELSAYNSELR 270 G++K A +G G+G++FL + T + H+V E + + A + +D++ N+EL Sbjct: 62 AGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVAGKVDPVDDIDTINTEL- 120 Query: 271 KKIEIVGLSQIDTVD 285 LS ++T + Sbjct: 121 ------ALSDLETCE 129 >gi|149247267|ref|XP_001528046.1| developmentally regulated GTP-binding protein 1 [Lodderomyces elongisporus NRRL YB-4239] gi|146448000|gb|EDK42388.1| developmentally regulated GTP-binding protein 1 [Lodderomyces elongisporus NRRL YB-4239] Length = 368 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A IG +G P+ GKST L+ +T + A Y FTTL G +K + + D+PGII+ Sbjct: 64 VASIGFVGFPSVGKSTLLSKLTGTHSEAAAYEFTTLTTVPGTIKYKGAKIQMLDLPGIIE 123 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + ++L ++ Sbjct: 124 GAKDGKGRGRQVIAVARSVNLLFLVL 149 >gi|268572541|ref|XP_002641348.1| Hypothetical protein CBG13201 [Caenorhabditis briggsae] gi|187028778|emb|CAP32026.1| hypothetical protein CBG_13201 [Caenorhabditis briggsae AF16] Length = 365 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L ++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 63 ARIGFVGFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + ++L ++ ++ Sbjct: 123 AKDGKGRGKQVIAVARTCSLILMVLDVMK 151 >gi|90408490|ref|ZP_01216649.1| GTP-binding protein HflX [Psychromonas sp. CNPT3] gi|90310422|gb|EAS38548.1| GTP-binding protein HflX [Psychromonas sp. CNPT3] Length = 430 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 10/132 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 IA + ++G NAGKST +T A AD F TL P L +K + ILAD G + Sbjct: 197 IATVSLVGYTNAGKSTLFNHMTGADVYAADQLFATLDPTLRQIKVQDVGNCILADTVGFV 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKI 273 ++ H L+ T +LLHIV +EN + A Q +L+++ A + Sbjct: 257 RHLPHDLVAAFKATLQETREATLLLHIVDCSDENYRDNIDAVQLVLNDIDAGDVP----- 311 Query: 274 EIVGLSQIDTVD 285 ++ +++ID +D Sbjct: 312 QLTIMNKIDALD 323 >gi|156085940|ref|XP_001610379.1| GTP1/OBG containing protein [Babesia bovis T2Bo] gi|154797632|gb|EDO06811.1| GTP1/OBG containing protein [Babesia bovis] Length = 195 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 1/113 (0%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 + +D K+ G GG G +SFRREK + GG DGG+GG GG V++ ++ L + Sbjct: 81 QLVDRCKLIAIGGRGGNGCVSFRREKHVPLGGADGGNGGPGGSVYLICDDEISNLNHVKK 140 Query: 62 QQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQR 114 +KA+ G G+ R+GAKG+ + VP GT V+ ++G L L ++G R Sbjct: 141 LYIYKAESGNHGLGGRRNGAKGKHCYIPVPPGTYVYNKEG-KLYAILQRKGNR 192 >gi|1749478|dbj|BAA13797.1| unnamed protein product [Schizosaccharomyces pombe] Length = 366 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 2/114 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I +G IG P+ GKST + +T + + A Y FTTL G+++ + + D+PGII+ Sbjct: 63 IGTVGFIGFPSVGKSTLMTQLTGTRSEAAAYEFTTLTTVPGVLQYNGAKIQILDLPGIIE 122 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + +++ ++ L+ + + I +EL + L K+ Sbjct: 123 GAKDGRGRGKQVITVARTCNLIFIVLDVLKP--MSHKRIIEEELEGFGIRLNKE 174 >gi|17555344|ref|NP_499457.1| hypothetical protein T28D6.6 [Caenorhabditis elegans] gi|5832862|emb|CAB55097.1| C. elegans protein T28D6.6, confirmed by transcript evidence [Caenorhabditis elegans] gi|6018399|emb|CAB57908.1| C. elegans protein T28D6.6, confirmed by transcript evidence [Caenorhabditis elegans] Length = 366 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L ++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 63 ARIGFVGFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + ++L ++ ++ Sbjct: 123 AKDGKGRGKQVIAVARTCSLILMVLDVMK 151 >gi|307104022|gb|EFN52278.1| hypothetical protein CHLNCDRAFT_36860 [Chlorella variabilis] Length = 369 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 1/85 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G++G P+ GKST L VT + A Y FTTL G+++ + L D+PGII+ Sbjct: 64 ARVGLVGFPSVGKSTLLTKVTGTFSEAAGYEFTTLTCIPGMIRYRGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + T RT L+ IV Sbjct: 124 AKDGKGRGRQVIS-TARTCNLIIIV 147 >gi|119495229|ref|XP_001264404.1| GTP-binding protein [Neosartorya fischeri NRRL 181] gi|119412566|gb|EAW22507.1| GTP-binding protein [Neosartorya fischeri NRRL 181] Length = 412 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 28/109 (25%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-----------------VKEG 204 IG++G P++GKST L S+T A K+ + FTT+ P I K Sbjct: 7 IGLVGKPSSGKSTTLNSLTDASSKVGE--FTTIDPQRAIGYLQIECACKRFNVSDKCKPN 64 Query: 205 YKEFI---------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 Y + L D+ G++ AHQG G+G++FL L+H+V Sbjct: 65 YGSCVDGRRSVPIELLDVAGLVPGAHQGRGLGNKFLDDLRHADALIHVV 113 >gi|70607341|ref|YP_256211.1| GTP-binding protein [Sulfolobus acidocaldarius DSM 639] gi|68567989|gb|AAY80918.1| conserved GTP-binding protein [Sulfolobus acidocaldarius DSM 639] Length = 328 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 28/173 (16%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + I + G PN GKS+ ++ ++ AKP+IA YPFTT ++G + G + D PGI+ Sbjct: 156 LPTIIVAGPPNVGKSSLVSKISSAKPEIASYPFTTKEIHVGHITSGILTVQVIDTPGIL- 214 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD----ELSAYNSELRKKIE 274 DR +K +R V L ++A+ +N+ + D + Y +L E Sbjct: 215 ---------DRPMK--DRNVVELKAINAI-KNLNGIILFLFDASNSSMYTYKEQLDLYRE 262 Query: 275 IVGL--------SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 I+GL ++ID ++ + KNE+ + Q+ FE S+ GI ++L Sbjct: 263 IMGLGKVVIPVINKIDDLNEELYNAIKNEIKNE--QI-FEISAEKNTGINELL 312 >gi|255642041|gb|ACU21287.1| unknown [Glycine max] Length = 368 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 48/87 (55%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +G++G P+ GKST L +T ++A Y FTTL G++ + L D+PGII+ A Sbjct: 67 VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIEGAK 126 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALE 248 G G G + + + +L ++ A++ Sbjct: 127 DGKGRGRQVISTARTCNCILIVLDAIK 153 >gi|19114262|ref|NP_593350.1| GTPase Rbg1 (predicted) [Schizosaccharomyces pombe 972h-] gi|31077067|sp|Q9UT21|YFY7_SCHPO RecName: Full=Uncharacterized GTP-binding protein C9.07c gi|6014426|emb|CAB57425.1| GTPase Rbg1 (predicted) [Schizosaccharomyces pombe] Length = 366 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 2/114 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I +G IG P+ GKST + +T + + A Y FTTL G+++ + + D+PGII+ Sbjct: 63 IGTVGFIGFPSVGKSTLMTQLTGTRSEAAAYEFTTLTTVPGVLQYNGAKIQILDLPGIIE 122 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + +++ ++ L+ + + I +EL + L K+ Sbjct: 123 GAKDGRGRGKQVITVARTCNLIFIVLDVLKP--MSHKRIIEEELEGFGIRLNKE 174 >gi|307132703|ref|YP_003884719.1| putative GTPase [Dickeya dadantii 3937] gi|306530232|gb|ADN00163.1| predicted GTPase [Dickeya dadantii 3937] Length = 426 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 + + ++G NAGKST +T A AD F TL P L I + + +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRMTSADVYAADQLFATLDPTLRRISVDDVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 + H L+ T +LLH+V A ++EN+ A + +L E+ A + Sbjct: 257 RELPHDLVAAFKATLQETREATLLLHVVDASDARVDENIDAVNE-VLAEIEADD------ 309 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I + ++ +D + + + + S+ TG GIP +L+ L +++ Sbjct: 310 --IPFMLVMNKIDRQENVEPRIDRDEENRPIRVWLSAQTGEGIPLLLQALTERL 361 >gi|302525521|ref|ZP_07277863.1| GTP-binding protein HflX [Streptomyces sp. AA4] gi|302434416|gb|EFL06232.1| GTP-binding protein HflX [Streptomyces sp. AA4] Length = 481 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 13/174 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I+G NAGKS+ L ++T A + D F TL P + + F L D G + Sbjct: 253 VPSVAIVGYTNAGKSSLLNALTGAGVLVEDALFATLDPTTRRAQTADGRTFTLTDTVGFV 312 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIV----SALEENVQAAYQCILDELSAYNSELRKK 272 ++ HQ L+ +LLH+V +A E+ V A + +L E++ E Sbjct: 313 RHLPHQLVDAFRSTLEEAADADLLLHVVDGSDAAPEDQVNAVRE-VLAEITRSRKEPLPP 371 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E++ +++ D D TLAR ++ L G V + S+ TG G+ + E L +++ Sbjct: 372 -ELLVINKADAADDVTLARLRHALP---GSV--QISARTGSGVADLAEVLAERL 419 >gi|15235111|ref|NP_195662.1| GTP-binding protein, putative [Arabidopsis thaliana] gi|5042168|emb|CAB44687.1| GTP-binding-like protein [Arabidopsis thaliana] gi|7270936|emb|CAB80615.1| GTP-binding-like protein [Arabidopsis thaliana] gi|14334722|gb|AAK59539.1| putative GTP-binding protein [Arabidopsis thaliana] gi|332661681|gb|AEE87081.1| GTP-binding protein-relatedlike protein [Arabidopsis thaliana] Length = 369 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 48/87 (55%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +G++G P+ GKST L +T ++A Y FTTL G++ + L D+PGII+ A Sbjct: 68 VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIEGAK 127 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALE 248 G G G + + + +L ++ A++ Sbjct: 128 DGKGRGRQVISTARTCNCILIVLDAIK 154 >gi|19173579|ref|NP_597382.1| DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN (GTP1/OBG FAMILY) [Encephalitozoon cuniculi GB-M1] gi|19170785|emb|CAD26559.1| DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN (GTP1/OBG FAMILY) [Encephalitozoon cuniculi GB-M1] Length = 362 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 47/90 (52%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 IA +G +G P+ GKST ++ +T +A Y FTTL G++ + + D+PGII+ Sbjct: 62 IARVGFVGFPSVGKSTLMSKLTGTFSAVASYEFTTLTTVPGVLNYNGAKIQILDLPGIIE 121 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + L +++ + L+ Sbjct: 122 GAKDGKGRGKQVLAVARTCSLIIVCLDVLK 151 >gi|59712929|ref|YP_205705.1| putative GTPase HflX [Vibrio fischeri ES114] gi|197335770|ref|YP_002157118.1| GTP-binding protein HflX [Vibrio fischeri MJ11] gi|59481030|gb|AAW86817.1| predicted GTPase [Vibrio fischeri ES114] gi|197317260|gb|ACH66707.1| GTP-binding protein HflX [Vibrio fischeri MJ11] Length = 433 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 17/175 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L ++ ILAD G I Sbjct: 197 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIEVADVGTSILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T+ ++LLH+V A EN++A +L+E+ A Sbjct: 257 RHLPHDLVAAFKATLQETQEANILLHVVDASDERFRENIEAV-DIVLEEIDANEVPT--- 312 Query: 273 IEIVGLSQIDTV-DSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID + D + E +C V S++ G GI + + L +++ Sbjct: 313 --LLVMNKIDNLEDQQPRIERDEEGIPRCVWV----SAMEGKGIELLFQALTERL 361 >gi|159111683|ref|XP_001706072.1| Developmentally regulated GTP-binding protein 1 [Giardia lamblia ATCC 50803] gi|157434165|gb|EDO78398.1| Developmentally regulated GTP-binding protein 1 [Giardia lamblia ATCC 50803] Length = 368 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL T A+ A Y FTTL G ++ + D+PGII+ Sbjct: 64 ARIALVGFPSVGKSTFLTRYTNAESASAAYEFTTLTCVPGTMEINGAPIQILDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + ++ ++SA N + + EL + L K+ Sbjct: 124 AATGLGKGRQVIATARTADAIIMMLSAC--NAVKERRILTKELESMGIRLNKR 174 >gi|167645702|ref|YP_001683365.1| GTP-binding protein Era [Caulobacter sp. K31] gi|167348132|gb|ABZ70867.1| GTP-binding protein Era [Caulobacter sp. K31] Length = 329 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 80/186 (43%), Gaps = 41/186 (22%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI----- 216 IIG PNAGKST + + AK I TT +P G+ G + +L D PGI Sbjct: 27 AIIGAPNAGKSTLVNRMVGAKVSIVTQKVQTTRFPVRGVAMTGQTQIVLVDTPGIFTPRR 86 Query: 217 ------IKNAHQGAGIGDRFLKHTERTHVLLHIV-------------SALEENVQAAYQC 257 +++A GA E + V++H+V SA E Q Sbjct: 87 RLDRAMVRSAWSGA----------EDSEVVVHLVDVQAELASRERRASAGEHRSVQDVQT 136 Query: 258 ILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL-ATQCGQVPFEFSSITGHGIP 316 I++ L A N ++ I+ L++ID V +TL ++L T F S+ TG G+ Sbjct: 137 IIEGLKASNRQV-----ILALNKIDGVKRETLLAVAHDLYETGVYSEVFMISASTGAGVD 191 Query: 317 QILECL 322 ++ L Sbjct: 192 DLMAKL 197 >gi|89075984|ref|ZP_01162356.1| putative GTP-binding protein HflX [Photobacterium sp. SKA34] gi|89048333|gb|EAR53912.1| putative GTP-binding protein HflX [Photobacterium sp. SKA34] Length = 429 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 19/176 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L I ILAD G I Sbjct: 197 IPTISLVGYTNAGKSTLFNRITDAGVYAADQLFATLDPTLRKIAVADVGTAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H LK T+ +LLH+V A ENV+A + +L+E+ A Sbjct: 257 RHLPHDLVAAFKATLKETQEADLLLHVVDASDDRFRENVEAV-ETVLEEIDAG------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQILECLHDKI 326 E+ L ++ +D+ L + +A VP S++ G GI + + L +++ Sbjct: 309 -EVPTLIIMNKIDN--LEHAEPRIARDEEGVPRRVWVSAMEGQGIDLLFQALTERL 361 >gi|297802052|ref|XP_002868910.1| hypothetical protein ARALYDRAFT_912415 [Arabidopsis lyrata subsp. lyrata] gi|297314746|gb|EFH45169.1| hypothetical protein ARALYDRAFT_912415 [Arabidopsis lyrata subsp. lyrata] Length = 369 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 48/87 (55%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +G++G P+ GKST L +T ++A Y FTTL G++ + L D+PGII+ A Sbjct: 68 VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIEGAK 127 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALE 248 G G G + + + +L ++ A++ Sbjct: 128 DGKGRGRQVISTARTCNCILIVLDAIK 154 >gi|145341838|ref|XP_001416010.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144576233|gb|ABO94302.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 374 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 46/87 (52%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +G++G P+ GKST L +T + A Y FTTL G++K L D+PGII+ A Sbjct: 69 VGLVGFPSVGKSTLLTKLTGVFSEAAAYEFTTLTCVPGVIKYRGARIQLLDLPGIIEGAK 128 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALE 248 G G + + V++ ++ AL+ Sbjct: 129 DNKGRGRQVISTARTCDVIIIVLDALK 155 >gi|322515248|ref|ZP_08068246.1| GTP-binding protein HflX [Actinobacillus ureae ATCC 25976] gi|322118753|gb|EFX90959.1| GTP-binding protein HflX [Actinobacillus ureae ATCC 25976] Length = 455 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 7/114 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T A AD FTTL P L ++ + ILAD G I Sbjct: 219 IPTVSLVGYTNAGKSTLFNAITNAGIYAADQLFTTLDPTLRRMQVQDVSTTILADTVGFI 278 Query: 218 K-NAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYN 266 + H L+ T +LLH++ A + EN+ A Q +LDE+ A + Sbjct: 279 RFLPHDLVSAFKSTLQETTEASLLLHVIDAADDRKNENIDAVNQ-VLDEIGALD 331 >gi|170038637|ref|XP_001847155.1| GTP-binding protein 128up [Culex quinquefasciatus] gi|167882354|gb|EDS45737.1| GTP-binding protein 128up [Culex quinquefasciatus] Length = 367 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 64 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +++ ++ L+ Sbjct: 124 AKDGKGRGRQVIAVARTCNLIFMVLDVLK 152 >gi|302833814|ref|XP_002948470.1| hypothetical protein VOLCADRAFT_80241 [Volvox carteri f. nagariensis] gi|300266157|gb|EFJ50345.1| hypothetical protein VOLCADRAFT_80241 [Volvox carteri f. nagariensis] Length = 400 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 47/85 (55%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKS+ L +T + + A Y FTTL G++ + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSSLLTLLTGTESEAAAYEFTTLTCIPGVIHYNDSKIQLLDLPGIIEGAA 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSA 246 +G G G + + + +LL ++ A Sbjct: 125 EGKGRGRQVIAVCKSADLLLMVLDA 149 >gi|262189578|ref|ZP_06047982.1| GTP-binding protein HflX [Vibrio cholerae CT 5369-93] gi|262034542|gb|EEY52878.1| GTP-binding protein HflX [Vibrio cholerae CT 5369-93] Length = 429 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 23/180 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL---GIVKEGYKEFILADIPG 215 I I ++G NAGKST +T A AD F TL P L +V G +LAD G Sbjct: 197 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIDLVDVGPA--VLADTVG 254 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELR 270 I++ H L+ T+ +LLH+V A EN+QA + +L E+ A+ Sbjct: 255 FIRHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAV-ETVLQEIDAHEVPT- 312 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFS 328 ++ +++ID ++ + ++++ VP S++ G GI + E L + + S Sbjct: 313 ----LLVMNKIDNLEEQSPRIERDDEG-----VPRVVWISAMQGSGIELLFEALSEHLAS 363 >gi|118364117|ref|XP_001015281.1| GTP-binding protein YchF containing protein [Tetrahymena thermophila] gi|89297048|gb|EAR95036.1| GTP-binding protein YchF containing protein [Tetrahymena thermophila SB210] Length = 432 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 18/108 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFI---------- 209 +GI+G+ N GKS + + ++PF T+ PN IVK + E++ Sbjct: 77 MGIVGMANVGKSLTFNLLCKQSVPSENFPFCTIDPNTAIVKVPDSRFEYLVKAFKPASQV 136 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENV 251 + DI G++K A +G G+G+ FL H + +V A E EN+ Sbjct: 137 EAHLQITDIAGLVKGASEGHGLGNEFLSHISEVDGIYQVVRAFEGENI 184 >gi|308160748|gb|EFO63221.1| Developmentally regulated GTP-binding protein 1 [Giardia lamblia P15] Length = 368 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL T A+ A Y FTTL G ++ + D+PGII+ Sbjct: 64 ARIALVGFPSVGKSTFLTRYTNAESASAAYEFTTLTCVPGTMEINGAPIQILDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + ++ ++SA N + + EL + L K+ Sbjct: 124 AATGLGKGRQVIATARTADAIIMMLSAC--NAVKEKRVLTRELESMGIRLNKR 174 >gi|156100905|ref|XP_001616146.1| nucleolar GTP-binding protein 1 [Plasmodium vivax SaI-1] gi|148805020|gb|EDL46419.1| nucleolar GTP-binding protein 1, putative [Plasmodium vivax] Length = 723 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 24/191 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ V+RA ++ Y FTT +G F + D PG++ + Sbjct: 173 ILLAGAPNVGKSSFINMVSRANVEVQPYSFTTTNLYVGHFDFKMNRFQVVDTPGLLDRS- 231 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + +R L HI + V + +C I +++S ++S R K + Sbjct: 232 ----LENRNTIEMTTITALAHINGVILFIVDISEECGMSIKEQVSLFHSIRTLFRNKSVV 287 Query: 276 VGLSQIDTVDSDTLARKKNELATQC---GQVPFE---FSSITGHGIPQ-------ILECL 322 +G ++ID + D L+ + L Q +VP + FS++TG G+ Q +L+ Sbjct: 288 IGFNKIDRTNLDGLSVENKMLIKQIIDDAKVPVKFCSFSTLTGVGVEQAKVVACDLLKSD 347 Query: 323 HDKIFSIRGEN 333 H F + EN Sbjct: 348 HAAEFQLDREN 358 >gi|157110428|ref|XP_001651096.1| developmentally regulated GTP-binding protein 1 (drg 1) [Aedes aegypti] gi|108878700|gb|EAT42925.1| developmentally regulated GTP-binding protein 1 (drg 1) [Aedes aegypti] Length = 367 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 64 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +++ ++ L+ Sbjct: 124 AKDGKGRGRQVIAVARTCNLIFMVLDVLK 152 >gi|115625812|ref|XP_001177345.1| PREDICTED: similar to developmentally regulated GTP binding protein 2 isoform 1 [Strongylocentrotus purpuratus] gi|115973263|ref|XP_001177289.1| PREDICTED: similar to developmentally regulated GTP binding protein 2 isoform 1 [Strongylocentrotus purpuratus] Length = 367 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 51/93 (54%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ KST L ++T+ + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVVKSTLLNTMTKTHSESAAYAFTTLTCIPGVIEYNGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + +++ ++ A + +VQ Sbjct: 123 ASQGKGRGRQVIAVARTADLVVMMLDANKGDVQ 155 >gi|115625810|ref|XP_790752.2| PREDICTED: similar to developmentally regulated GTP binding protein 2 isoform 2 [Strongylocentrotus purpuratus] gi|115973261|ref|XP_001177427.1| PREDICTED: similar to developmentally regulated GTP binding protein 2 isoform 2 [Strongylocentrotus purpuratus] Length = 363 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 51/93 (54%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ KST L ++T+ + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVVKSTLLNTMTKTHSESAAYAFTTLTCIPGVIEYNGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 A QG G G + + +++ ++ A + +VQ Sbjct: 123 ASQGKGRGRQVIAVARTADLVVMMLDANKGDVQ 155 >gi|83311472|ref|YP_421736.1| GTPase [Magnetospirillum magneticum AMB-1] gi|82946313|dbj|BAE51177.1| GTPase [Magnetospirillum magneticum AMB-1] Length = 435 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 13/172 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST +TRA+ D F TL P + +V ++ IL+D G I + Sbjct: 208 VALVGYTNAGKSTLFNQLTRAEVLAKDMLFATLDPTMRDLVLPSGRKIILSDTVGFISDL 267 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 H+ L+ V++H+ VS + QAA +L EL R +E Sbjct: 268 PHELVAAFRATLEEVLEADVVVHVRDVSHPDTEAQAADVDTVLKELGLAEVVDRGLVE-- 325 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKI 326 L++ID +D + ++ E+ Q + S++TG G+ ++L L ++ Sbjct: 326 ALNKIDLLDDE----RRQEVLNQARRREGVMALSAVTGQGVDELLAELDRRL 373 >gi|261209769|ref|ZP_05924075.1| GTP-binding protein HflX [Vibrio sp. RC341] gi|260841185|gb|EEX67695.1| GTP-binding protein HflX [Vibrio sp. RC341] Length = 429 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 19/178 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L + +LAD G I Sbjct: 197 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIDLADVGPAVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T+ +LLH+V A EN+QA + +L E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAV-ETVLQEIDAHEVPT--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFS 328 ++ +++ID ++ ++++ VP S++ G GI + E L +++ S Sbjct: 313 --LLVMNKIDNLEEHAPRIERDDEG-----VPRVVWISAMQGTGIELLFEALSERLAS 363 >gi|76802861|ref|YP_330956.1| GTP-binding protein [Natronomonas pharaonis DSM 2160] gi|76558726|emb|CAI50319.1| GTP-binding protein [Natronomonas pharaonis DSM 2160] Length = 371 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 5/120 (4%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L ++T A+ + Y FTTL N G+++ L D+PG+I+ Sbjct: 62 ATVALVGFPSVGKSTLLNALTNAESETGSYEFTTLDVNPGMLEYRGANLQLLDVPGLIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A +G G G L ++L ++SA E + Y+ + EL YN+++R E V ++ Sbjct: 122 AAEGRGGGQAVLSVVRTADLVLFVLSAFEID---QYERLSTEL--YNNKVRLDTEPVQVN 176 >gi|304315009|ref|YP_003850156.1| GTPase [Methanothermobacter marburgensis str. Marburg] gi|302588468|gb|ADL58843.1| predicted GTPase [Methanothermobacter marburgensis str. Marburg] Length = 336 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 38/56 (67%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + I G PN GKST L ++T A+P++ADYPFTT +G ++ +++ + D PG++ Sbjct: 165 VVIAGFPNVGKSTLLRTLTGAEPEVADYPFTTKGIQIGHLERKWRKIQVIDTPGLL 220 >gi|239799275|dbj|BAH70566.1| ACYPI004502 [Acyrthosiphon pisum] Length = 367 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 64 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT L+ IV Sbjct: 124 AKDGKGRGRQVIA-VARTCSLIFIV 147 >gi|154345361|ref|XP_001568622.1| GTP-binding protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065959|emb|CAM43742.1| putative GTP-binding protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 374 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 49/90 (54%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 ++G P+ GKS+FL+ VT+ + + A Y FTTL G + E + D+PGII+ A + Sbjct: 68 ALVGFPSVGKSSFLSRVTQTESEAAGYEFTTLTCIPGKLMHKGTEIQILDLPGIIEGAAE 127 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 G G G + + +++ I+ A + Q Sbjct: 128 GKGRGRQVIATARTADMIILILDATKAEPQ 157 >gi|48477308|ref|YP_023014.1| GTP binding protein [Picrophilus torridus DSM 9790] gi|48429956|gb|AAT42821.1| GTP binding protein [Picrophilus torridus DSM 9790] Length = 359 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 43/82 (52%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G PN GKS+ L +T K ++ ++ FTTL G + + + D+PGII N Sbjct: 61 ATVALVGYPNVGKSSLLNKLTNKKSEVGNFAFTTLTIVPGTMNYRGAQIQILDLPGIIDN 120 Query: 220 AHQGAGIGDRFLKHTERTHVLL 241 A GAG G L ++L Sbjct: 121 AALGAGRGREVLAAVRNADLIL 142 >gi|261254056|ref|ZP_05946629.1| GTP-binding protein HflX [Vibrio orientalis CIP 102891] gi|260937447|gb|EEX93436.1| GTP-binding protein HflX [Vibrio orientalis CIP 102891] Length = 429 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 25/181 (13%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +T A AD F TL P L ++ ILAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIELSDVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCI----LDELSAYNSE 268 ++ H L+ T+ +LLH+V A EN+QA ++ + DE+ A Sbjct: 257 RHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAVHEVLAEIDADEIPA---- 312 Query: 269 LRKKIEIVGLSQIDTVD-SDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 +V +++ID ++ + + +E Q V S++ G GI + + L +++ Sbjct: 313 ------LVVMNKIDNLEGQNPRIDRDDEGVPQTVWV----SAMEGKGIELLFDALTERLA 362 Query: 328 S 328 S Sbjct: 363 S 363 >gi|50542888|ref|XP_499610.1| YALI0A00286p [Yarrowia lipolytica] gi|49645475|emb|CAG83530.1| YALI0A00286p [Yarrowia lipolytica] Length = 368 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST L+ +T + A Y FTTL G++ + + D+PGII+ Sbjct: 64 VASVGFIGFPSVGKSTLLSKLTGTHSEAAAYEFTTLTTVPGVIMYRGAKIQMLDLPGIIE 123 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT L+ +V Sbjct: 124 GAKDGKGRGRQVIA-VARTCNLIFVV 148 >gi|260817479|ref|XP_002603614.1| hypothetical protein BRAFLDRAFT_115447 [Branchiostoma floridae] gi|229288934|gb|EEN59625.1| hypothetical protein BRAFLDRAFT_115447 [Branchiostoma floridae] Length = 335 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 42/73 (57%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L ++T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTLLNTLTATHSESASYEFTTLTCIPGVIQYNGANIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLK 232 A QG + ++ L+ Sbjct: 123 ASQGRSLLEKELE 135 >gi|328721118|ref|XP_003247215.1| PREDICTED: GTP-binding protein 128up-like [Acyrthosiphon pisum] Length = 367 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 64 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT L+ IV Sbjct: 124 AKDGKGRGRQVIA-VARTCSLIFIV 147 >gi|158288234|ref|XP_310117.3| AGAP010624-PA [Anopheles gambiae str. PEST] gi|157019226|gb|EAA05833.4| AGAP010624-PA [Anopheles gambiae str. PEST] Length = 367 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 64 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +++ ++ L+ Sbjct: 124 AKDGKGRGRQVIAVARTCNLIFMVLDVLK 152 >gi|309799273|ref|ZP_07693521.1| GTP-binding protein [Streptococcus infantis SK1302] gi|308117118|gb|EFO54546.1| GTP-binding protein [Streptococcus infantis SK1302] Length = 53 Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 21/40 (52%), Positives = 31/40 (77%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK 202 GI+GLPN GKST ++T+A + A+YPF T+ PN+G+V+ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVE 45 >gi|194380642|dbj|BAG58474.1| unnamed protein product [Homo sapiens] Length = 145 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 38/64 (59%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTFL+ +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQG 223 A QG Sbjct: 123 AAQG 126 >gi|94677008|ref|YP_589008.1| GTP-binding protein hflX [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94220158|gb|ABF14317.1| GTP-binding protein hflX [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 427 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 10/133 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST S+T A +AD FTTL P L + +LAD G I Sbjct: 196 IPTILLVGYTNAGKSTLFNSITEASVDVADKLFTTLDPTLKRLNIPTIGNIVLADTVGFI 255 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKI 273 ++ H L+ T++ +LLHIV A ++ + A + +L E++A + Sbjct: 256 QHLPHHLVASFKSTLQETQQAKLLLHIVDATDQCINIKIDAVKKVLVEINANHIS----- 310 Query: 274 EIVGLSQIDTVDS 286 ++ +++ID +D+ Sbjct: 311 TLLVMNKIDQLDN 323 >gi|90581376|ref|ZP_01237172.1| putative GTP-binding protein HflX [Vibrio angustum S14] gi|90437486|gb|EAS62681.1| putative GTP-binding protein HflX [Vibrio angustum S14] Length = 429 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L I ILAD G I Sbjct: 197 IPTISLVGYTNAGKSTLFNRITDAGVYAADQLFATLDPTLRKIAVADVGTAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H LK T+ +LLH+V A EN++A + +L+E+ A Sbjct: 257 RHLPHDLVAAFKATLKETQEADLLLHVVDASDDRFRENIEAV-ETVLEEIDAG------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E+ L ++ +D+ A + E + S++ G GI + + L +++ Sbjct: 309 -EVPTLIIMNKIDNLEHAEPRIERDEEGVPRRVWVSAMEGQGIDLLFQALTERL 361 >gi|260774637|ref|ZP_05883544.1| GTP-binding protein HflX [Vibrio coralliilyticus ATCC BAA-450] gi|260609427|gb|EEX35572.1| GTP-binding protein HflX [Vibrio coralliilyticus ATCC BAA-450] Length = 429 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 19/178 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L ++ ILAD G I Sbjct: 197 IPTISLVGYTNAGKSTMFNRITEAGVYAADQLFATLDPTLRKIELADVGTAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T+ +LLH+V A EN+ A ++ +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIHAVHE-VLEEIGAH------- 308 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFS 328 E+ L ++ +D+ L +K + +P S++ G G+ + + L +++ S Sbjct: 309 -EVPALLVMNKIDN--LEDQKPRIERDEEGIPRAVWVSAMEGIGVELLFDALTERLAS 363 >gi|259489035|tpe|CBF88973.1| TPA: GTP-binding protein (AFU_orthologue; AFUA_1G13540) [Aspergillus nidulans FGSC A4] Length = 412 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 28/109 (25%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L S+T A K+ FTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNSLTDASSKVG--IFTTIDPQRAIGYLQIDCACKRYGVADKCKPN 64 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G +G + L D+ G++ AHQG G+G++FL + L+H+V Sbjct: 65 YGACTDGKRSVPIELLDVAGLVPGAHQGRGLGNKFLDDLRQADALIHVV 113 >gi|195333586|ref|XP_002033471.1| GM21327 [Drosophila sechellia] gi|188504293|gb|ACD56255.1| 128UP [Drosophila sechellia] gi|194125441|gb|EDW47484.1| GM21327 [Drosophila sechellia] Length = 368 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 65 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +++ ++ L+ Sbjct: 125 AKDGKGRGRQVIAVARTCNLIFMVLDCLK 153 >gi|304313982|ref|YP_003849129.1| GTP-binding protein [Methanothermobacter marburgensis str. Marburg] gi|302587441|gb|ADL57816.1| GTP-binding protein [Methanothermobacter marburgensis str. Marburg] Length = 364 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 42/72 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 + + +IG P+ GKST L +T A+ K+ +Y FTTL G+++ + + DIPGII Sbjct: 62 STVVLIGFPSVGKSTLLNELTNAESKVGEYQFTTLEIVPGVMEYRGAQIQIFDIPGIITG 121 Query: 220 AHQGAGIGDRFL 231 A +G G G L Sbjct: 122 ASRGKGRGREIL 133 >gi|194883822|ref|XP_001975996.1| GG20239 [Drosophila erecta] gi|190659183|gb|EDV56396.1| GG20239 [Drosophila erecta] Length = 368 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 65 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +++ ++ L+ Sbjct: 125 AKDGKGRGRQVIAVARTCNLIFMVLDCLK 153 >gi|150026004|ref|YP_001296830.1| GTP-binding protein Era [Flavobacterium psychrophilum JIP02/86] gi|149772545|emb|CAL44028.1| GTP-binding protein Era [Flavobacterium psychrophilum JIP02/86] Length = 293 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + A V I TT + LGIV + IL+D PGIIK A Sbjct: 8 VNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQMILSDTPGIIKPA 67 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 ++ F+K E VL+++V E++++ DE + +N + KI ++ L Sbjct: 68 YEMQESMMNFVKSAFEDADVLVYMVEIGEQDLK-------DE-AFFNKIINAKIPVLLL- 118 Query: 280 QIDTVDSDTLARKKNELATQCGQVP----FEFSSITGHGIPQILE 320 ++ +D+ A+ + ++A +VP F S++ +P++ + Sbjct: 119 -LNKIDTSNQAQLEAQVAFWTAKVPNAEIFPISALQNFNVPEVFD 162 >gi|18089152|gb|AAH20803.1| Developmentally regulated GTP binding protein 1 [Homo sapiens] Length = 367 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ + A Y FTTL G+++ + L D+PGII+ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEAAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + +++L ++ L+ + I +EL + L K +G Sbjct: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKP--LGHKKIIENELEGFGIRLNSKPPNIGFK 182 Query: 280 QID 282 + D Sbjct: 183 KKD 185 >gi|212633665|ref|YP_002310190.1| GTP-binding protein HflX [Shewanella piezotolerans WP3] gi|212555149|gb|ACJ27603.1| GTP-binding protein HflX [Shewanella piezotolerans WP3] Length = 431 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 4/110 (3%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 ++ + ++G NAGKST ++T + AD F TL P L ++ +LAD G I+ Sbjct: 197 MSTVSLVGYTNAGKSTLFNALTASDVYAADQLFATLDPTLRKLELPDGHIVLADTVGFIR 256 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY---QCILDELSA 264 + H L+ T + +LLH+V + +EN+ + Q +L E+ A Sbjct: 257 HLPHDLVAAFKATLQETRQADLLLHVVDSADENMADNFEQVQSVLKEIDA 306 >gi|154151642|ref|YP_001405260.1| small GTP-binding protein [Candidatus Methanoregula boonei 6A8] gi|154000194|gb|ABS56617.1| small GTP-binding protein [Methanoregula boonei 6A8] Length = 330 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 26/175 (14%) Query: 155 KLKLIAD---IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA 211 KL I D + I G PN GKS+F+ V+ A P+IA YPFTT +G+ +EG Sbjct: 147 KLPHIEDAFTVVIAGYPNVGKSSFIRLVSSATPEIASYPFTTKGVIVGLREEGRIRIQFV 206 Query: 212 DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD--ELSAYNSEL 269 D PGI+ + ER + +SA+ NV + ILD E Y E+ Sbjct: 207 DTPGILDRPAE------------ERNPIERQALSAM-MNVASVILFILDPSEHCGYPMEM 253 Query: 270 RKKI--EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + ++ E+ G+ ++ + + K+++ G S+ T +G+ ++L L Sbjct: 254 QLRLLDEVKGMVRVPVI----VVANKSDIKVAAGY--RSMSTETKNGVDEVLAEL 302 >gi|311343|emb|CAA50701.1| GTP-binding protein [Drosophila melanogaster] Length = 368 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 65 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +++ ++ L+ Sbjct: 125 AKDGKGRGRQVIAVARTCNLIFMVLDCLK 153 >gi|195123593|ref|XP_002006288.1| GI20960 [Drosophila mojavensis] gi|193911356|gb|EDW10223.1| GI20960 [Drosophila mojavensis] Length = 368 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 65 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +++ ++ L+ Sbjct: 125 AKDGKGRGRQVIAVARTCNLIFMVLDCLK 153 >gi|195431080|ref|XP_002063576.1| GK21337 [Drosophila willistoni] gi|194159661|gb|EDW74562.1| GK21337 [Drosophila willistoni] Length = 368 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 65 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +++ ++ L+ Sbjct: 125 AKDGKGRGRQVIAVARTCNLIFMVLDCLK 153 >gi|72550046|ref|XP_843632.1| GTP-binding protein [Leishmania major strain Friedlin] gi|323364152|emb|CBZ13159.1| putative GTP-binding protein [Leishmania major strain Friedlin] Length = 374 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 50/92 (54%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 ++G P+ GKS+FL+ VT+ + + A Y FTTL G + E + D+PGII+ A + Sbjct: 68 ALVGFPSVGKSSFLSCVTQTESEAAGYEFTTLTCIPGKLMHKGTEIQILDLPGIIEGAAE 127 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 G G G + + +++ ++ A + Q + Sbjct: 128 GKGRGRQVIATARTADMIILMLDAAKAEAQRS 159 >gi|21228472|ref|NP_634394.1| GTP-binding protein [Methanosarcina mazei Go1] gi|20906954|gb|AAM32066.1| GTP-binding protein [Methanosarcina mazei Go1] Length = 338 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 20/187 (10%) Query: 146 LGQEKIIWLKLKLIAD---IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IV 201 L + + I KL + D I I G PN GKS+F++ +T A P+IA YPFTT +G Sbjct: 144 LNEARNILRKLPDVQDEPTIVIAGYPNVGKSSFVSKITGATPEIAPYPFTTKGVTIGHFT 203 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDE 261 ++G + + + D PG++ DR + ER + ++A+ + A ++D Sbjct: 204 RDGVR-YQVMDTPGLL----------DRPM--AERNDIERQAITAI-HYLDAVVMVVIDP 249 Query: 262 LSAYNSELRKKIEIVG-LSQIDTVDSDTLARKKNELA-TQCGQVPFEFSSITGHGIPQIL 319 + EL+ + ++ + + + +A K + + +V S+ITG GI Q++ Sbjct: 250 SESCGYELQDQRRLLAEIRENFNLPLLVVANKADRPEFMKMDEVELNMSTITGEGIEQVM 309 Query: 320 ECLHDKI 326 + L + I Sbjct: 310 DRLLEMI 316 >gi|308188268|ref|YP_003932399.1| tRNA modification GTPase trmE [Pantoea vagans C9-1] gi|308058778|gb|ADO10950.1| Probable tRNA modification GTPase trmE [Pantoea vagans C9-1] Length = 426 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST ++T A AD F TL P L + + +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNAMTSANVFAADQLFATLDPTLRRLNVADVGDVVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLH++ + EN+ AA +L+E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDGADLRVTENI-AAVDAVLEEIEADEIP---- 311 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D +NE + + S+ TG GIP + + L +++ Sbjct: 312 -TLLVMNKIDMLDGFEPRIDRNE---ENLPIRVWLSAQTGAGIPLLWQALSERL 361 >gi|299469639|emb|CBN76493.1| DRG2, developmentally regulated GTPase 2 [Ectocarpus siliculosus] Length = 404 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 51/110 (46%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKS+ L+ +T + A Y FTTL G V L D+PGII+ A Sbjct: 64 VAMIGFPSVGKSSLLSELTETESVAAGYEFTTLTCIPGNVYYNDTRIQLLDLPGIIEGAA 123 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 G G G + + ++L ++ +E V Q + EL L K Sbjct: 124 YGKGRGREVIAVARSSDLILMVLDGAKEGVNQHRQILERELETVGLRLNK 173 >gi|194753347|ref|XP_001958975.1| GF12286 [Drosophila ananassae] gi|190620273|gb|EDV35797.1| GF12286 [Drosophila ananassae] Length = 368 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 65 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +++ ++ L+ Sbjct: 125 AKDGKGRGRQVIAVARTCNLIFMVLDCLK 153 >gi|182677170|ref|YP_001831316.1| GTP-dependent nucleic acid-binding protein EngD [Beijerinckia indica subsp. indica ATCC 9039] gi|182633053|gb|ACB93827.1| GTP-binding protein YchF [Beijerinckia indica subsp. indica ATCC 9039] Length = 365 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 GI+GLPN GKST F A A + A+YPF T+ PN+G V K+ I Sbjct: 6 GIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGDVAVPDDRLTTLAAIAHSKDII 65 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+++ A +G G+G++FL + + H+V E++ Sbjct: 66 PTRLTFVDIAGLVRGASKGEGLGNQFLGNIRECDAIAHVVRCFEDS 111 >gi|242787960|ref|XP_002481124.1| nucleolar GTP-binding protein (Nog1), putative [Talaromyces stipitatus ATCC 10500] gi|218721271|gb|EED20690.1| nucleolar GTP-binding protein (Nog1), putative [Talaromyces stipitatus ATCC 10500] Length = 655 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL S+TRA + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLRSITRADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC ++D++ +NS K+ V Sbjct: 232 MNTIE-----MQSITAIAHLRSAILYFMDLSEQCGYSVVDQVKLFNSIKPLFANKLVFVV 286 Query: 278 LSQIDTVDSDTLARKKNEL---ATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + L + EL + G V + S T G+ + DK+ + R Sbjct: 287 INKIDVKRPEDLDVETKELLESVLKQGNVEMLQLSCTTTEGVTNVKNAACDKLIAER 343 >gi|188504285|gb|ACD56251.1| 128UP [Drosophila simulans] gi|188504287|gb|ACD56252.1| 128UP [Drosophila simulans] gi|188504289|gb|ACD56253.1| 128UP [Drosophila simulans] gi|188504291|gb|ACD56254.1| 128UP [Drosophila simulans] Length = 368 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 65 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +++ ++ L+ Sbjct: 125 AKDGKGRGRQVIAVARTCNLIFMVLDCLK 153 >gi|17981711|ref|NP_536733.1| upstream of RpIII128 [Drosophila melanogaster] gi|195485556|ref|XP_002091139.1| GE12398 [Drosophila yakuba] gi|62298260|sp|P32234|128UP_DROME RecName: Full=GTP-binding protein 128up gi|7303536|gb|AAF58591.1| upstream of RpIII128 [Drosophila melanogaster] gi|17862956|gb|AAL39955.1| SD05004p [Drosophila melanogaster] gi|194177240|gb|EDW90851.1| GE12398 [Drosophila yakuba] gi|220946530|gb|ACL85808.1| 128up-PA [synthetic construct] gi|220960404|gb|ACL92738.1| 128up-PA [synthetic construct] Length = 368 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 65 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +++ ++ L+ Sbjct: 125 AKDGKGRGRQVIAVARTCNLIFMVLDCLK 153 >gi|154246546|ref|YP_001417504.1| GTP-dependent nucleic acid-binding protein EngD [Xanthobacter autotrophicus Py2] gi|154160631|gb|ABS67847.1| GTP-binding protein YchF [Xanthobacter autotrophicus Py2] Length = 395 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLG--------------IVKEGY-- 205 GI+GLPN GKST F A A + A+YPF T+ PN+G I G Sbjct: 36 GIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGDVAVPDPRLDTLAEIAGSGAII 95 Query: 206 -KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+++ A +G G+G++FL + + H+V E+ Sbjct: 96 PTRLTFVDIAGLVRGASKGEGLGNQFLANIRECDAIAHVVRCFED 140 >gi|195024379|ref|XP_001985863.1| GH20854 [Drosophila grimshawi] gi|193901863|gb|EDW00730.1| GH20854 [Drosophila grimshawi] Length = 368 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 65 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +++ ++ L+ Sbjct: 125 AKDGKGRGRQVIAVARTCNLIFMVLDCLK 153 >gi|66359460|ref|XP_626908.1| DRG-like OBG family GTpase fused to an RNA binding domain TGS domain, Fun11p [Cryptosporidium parvum Iowa II] gi|67599391|ref|XP_666284.1| GTP-binding-like protein [Cryptosporidium hominis TU502] gi|46228087|gb|EAK88986.1| DRG-like OBG family GTpase fused to an RNA binding domain TGS domain, Fun11p [Cryptosporidium parvum Iowa II] gi|54657245|gb|EAL36051.1| GTP-binding-like protein [Cryptosporidium hominis] Length = 368 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 15/143 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G+IG P+ GKST L +T ++A Y FTTL G+ + L D+PGII+ Sbjct: 66 ARVGLIGFPSVGKSTLLNKLTGTFSEVAAYEFTTLTCVPGVFNYKGAKIQLLDLPGIIEG 125 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK------- 272 A G G G + + ++L ++ AL+ + I EL + L K+ Sbjct: 126 AKDGKGRGRQVIGVGRTCSLILIVLDALKPLTHK--RIIERELEGFGIRLNKQPPNISFT 183 Query: 273 ------IEIVGLSQIDTVDSDTL 289 I I Q+ +D +T+ Sbjct: 184 RKDRGGITITSTVQLKNIDEETI 206 >gi|24372195|ref|NP_716237.1| GTP-binding protein HflX [Shewanella oneidensis MR-1] gi|24346104|gb|AAN53682.1|AE015507_8 GTP-binding protein HflX [Shewanella oneidensis MR-1] Length = 435 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 4/107 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + ++G NAGKST ++T + AD F TL P L + ILAD G I++ Sbjct: 200 VSLVGYTNAGKSTLFNALTSSDVYAADQLFATLDPTLRKLDLPDGAVILADTVGFIRHLP 259 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY---QCILDELSA 264 H L+ T + +LLHIV +EN+ + Q +L E+ A Sbjct: 260 HDLVAAFKATLQETRQAELLLHIVDCADENMADNFEQVQSVLKEIDA 306 >gi|147920529|ref|YP_685676.1| GTP-binding protein [uncultured methanogenic archaeon RC-I] gi|110621072|emb|CAJ36350.1| conserved hypothetical GTP-binding protein [uncultured methanogenic archaeon RC-I] Length = 355 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 35/189 (18%) Query: 155 KLKLIADIG------IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF 208 KL+ + DI + G PN GKS+F A+VT A+P+IA YPFTT +G + Sbjct: 149 KLRQLPDIKDEPTIVVAGYPNVGKSSFTAAVTGARPEIAQYPFTTKGIIIGHFTRNRIRY 208 Query: 209 ILADIPGII------KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC--ILD 260 + D PG++ +N + I L+H HVLL I+ E C L+ Sbjct: 209 QVIDTPGLLDRPLEKRNDIELQAIA--ALRHV--GHVLLFIIDPSE-------TCGFTLE 257 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 E E+R +++ L+ + +D + E S++ G G+ + + Sbjct: 258 EQMKLLEEVRDTVKMPVLTVANKID----------VEHSKADADMEMSTLKGEGVLAVRD 307 Query: 321 CLHDKIFSI 329 L D + I Sbjct: 308 RLADMLEEI 316 >gi|289615510|emb|CBI57751.1| unnamed protein product [Sordaria macrospora] Length = 417 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 28/111 (25%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-----------------VKEG 204 IG++G P+AGKS+ L S+T A K+ FTT+ P I K Sbjct: 7 IGLVGKPSAGKSSTLNSLTDASSKVGS--FTTIDPQRAIGYLQIDCACARYGVSDRCKPN 64 Query: 205 YKEFI---------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 Y + L D+ G++ AH+G G+G++FL L+H+V A Sbjct: 65 YGSCVNGKRSVPIELLDVAGLVPGAHEGKGLGNKFLDDLRHADALIHVVDA 115 >gi|164430165|gb|ABY55410.1| 128up [Drosophila mauritiana] gi|164430167|gb|ABY55411.1| 128up [Drosophila mauritiana] gi|164430169|gb|ABY55412.1| 128up [Drosophila mauritiana] gi|164430171|gb|ABY55413.1| 128up [Drosophila mauritiana] gi|164430173|gb|ABY55414.1| 128up [Drosophila mauritiana] Length = 368 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 65 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +++ ++ L+ Sbjct: 125 AKDGKGRGRQVIAVARTCNLIFMVLDCLK 153 >gi|255937287|ref|XP_002559670.1| Pc13g12540 [Penicillium chrysogenum Wisconsin 54-1255] gi|211584290|emb|CAP92323.1| Pc13g12540 [Penicillium chrysogenum Wisconsin 54-1255] Length = 411 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 28/109 (25%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L S+T A K+ FTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNSLTDATSKVGS--FTTIDPQRAIGYLQIECPCQRYNVSDRCQPN 64 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G EG + L D+ G++ AHQG G+G++FL L+H+V Sbjct: 65 YGGCYEGRRSVPIELLDVAGLVPGAHQGRGLGNKFLDDLRHADALIHVV 113 >gi|195381661|ref|XP_002049566.1| GJ20681 [Drosophila virilis] gi|194144363|gb|EDW60759.1| GJ20681 [Drosophila virilis] Length = 368 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 65 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +++ ++ L+ Sbjct: 125 AKDGKGRGRQVIAVARTCNLIFMVLDCLK 153 >gi|303389233|ref|XP_003072849.1| GTP1/Obg developmentally regulated GTP-binding protein [Encephalitozoon intestinalis ATCC 50506] gi|303301992|gb|ADM11489.1| GTP1/Obg developmentally regulated GTP-binding protein [Encephalitozoon intestinalis ATCC 50506] Length = 362 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 47/90 (52%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 IA +G +G P+ GKST ++ +T +A Y FTTL G++ + + D+PGII+ Sbjct: 62 IARVGFVGFPSVGKSTLMSRLTGTFSAVAAYEFTTLTTVPGVLSYNGAKIQILDLPGIIE 121 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + L +++ + L+ Sbjct: 122 GAKDGKGRGKQVLAVARTCSLIIVCLDVLK 151 >gi|196010215|ref|XP_002114972.1| hypothetical protein TRIADDRAFT_38057 [Trichoplax adhaerens] gi|190582355|gb|EDV22428.1| hypothetical protein TRIADDRAFT_38057 [Trichoplax adhaerens] Length = 365 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L++++ ++A Y FTTL +++ + L D+PGII+ Sbjct: 63 ARIGFVGFPSVGKSTLLSNLSGVYSEVAAYEFTTLTTVPAVIRYKGAKVQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + RT L+ IV + + +Q + I EL + L K + + Sbjct: 123 AKDGKGRGRQVIA-VARTCSLILIVLDVLKPLQHK-RIIEKELEGFGIRLNKTLPNISFR 180 Query: 280 QID 282 + D Sbjct: 181 KKD 183 >gi|110667566|ref|YP_657377.1| GTP-binding protein [Haloquadratum walsbyi DSM 16790] gi|109625313|emb|CAJ51735.1| GTP-binding protein [Haloquadratum walsbyi DSM 16790] Length = 370 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 15/175 (8%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST + S+T A ++ Y FTTL N G+++ + D+PG+I+ Sbjct: 61 ATVALVGFPSVGKSTLINSMTNADSEVGAYEFTTLDVNPGMLQYNGANIQILDVPGLIEG 120 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G L +++ +VS E Y+ + +EL YN+++R +S Sbjct: 121 AAGGRGGGKEVLSVVRTADLVVFMVSVFE---IERYERLSEEL--YNNKIRLDTTPPNVS 175 Query: 280 -------QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHG---IPQILECLHD 324 I +D ++ ++ +A+ + + +++T G I Q+++ + D Sbjct: 176 IGRRGKGGIQVTSADDVSLDEDTVASVLREHGYTNATVTVRGNVSIDQLIDAIMD 230 >gi|125808950|ref|XP_001360932.1| GA21003 [Drosophila pseudoobscura pseudoobscura] gi|195153849|ref|XP_002017836.1| GL17092 [Drosophila persimilis] gi|54636104|gb|EAL25507.1| GA21003 [Drosophila pseudoobscura pseudoobscura] gi|194113632|gb|EDW35675.1| GL17092 [Drosophila persimilis] Length = 368 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 65 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +++ ++ L+ Sbjct: 125 AKDGKGRGRQVIAVARTCNLIFMVLDCLK 153 >gi|257076093|ref|ZP_05570454.1| GTP binding protein [Ferroplasma acidarmanus fer1] Length = 360 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 1/89 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G PN GKS+ L ++T K + ++ FTTL G + + + D+PGII N Sbjct: 60 ATMALVGYPNVGKSSLLNALTNKKSTVGNFEFTTLTVIPGTLNYNGAQIQILDLPGIIDN 119 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A GAG G R + T R L+ +V+ ++ Sbjct: 120 AALGAGRG-REIISTIRNVDLIVLVTDIQ 147 >gi|322495774|emb|CBZ31080.1| putative GTP-binding protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 374 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 50/92 (54%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 ++G P+ GKS+FL+ VT+ + + A Y FTTL G + E + D+PGII+ A + Sbjct: 68 ALVGFPSVGKSSFLSRVTQTESEAAGYEFTTLTCIPGKLMHKGTEIQILDLPGIIEGAAE 127 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 G G G + + +++ ++ A + Q + Sbjct: 128 GKGRGRQVIATARTADMIILMLDAAKAEAQRS 159 >gi|6319499|ref|NP_009581.1| Ola1p [Saccharomyces cerevisiae S288c] gi|586477|sp|P38219|OLA1_YEAST RecName: Full=Uncharacterized GTP-binding protein OLA1; AltName: Full=Obg-like ATPase 1 gi|498754|emb|CAA53682.1| YBR0309 [Saccharomyces cerevisiae] gi|536234|emb|CAA84967.1| unnamed protein product [Saccharomyces cerevisiae] gi|151946418|gb|EDN64640.1| obg-like ATPase [Saccharomyces cerevisiae YJM789] gi|190408806|gb|EDV12071.1| hypothetical protein SCRG_02939 [Saccharomyces cerevisiae RM11-1a] gi|256273172|gb|EEU08121.1| Ola1p [Saccharomyces cerevisiae JAY291] gi|259144869|emb|CAY77808.1| Ola1p [Saccharomyces cerevisiae EC1118] gi|285810362|tpg|DAA07147.1| TPA: Ola1p [Saccharomyces cerevisiae S288c] gi|323306078|gb|EGA59812.1| Ola1p [Saccharomyces cerevisiae FostersB] gi|323310199|gb|EGA63391.1| Ola1p [Saccharomyces cerevisiae FostersO] gi|323334519|gb|EGA75893.1| Ola1p [Saccharomyces cerevisiae AWRI796] gi|323338834|gb|EGA80049.1| Ola1p [Saccharomyces cerevisiae Vin13] gi|323349832|gb|EGA84046.1| Ola1p [Saccharomyces cerevisiae Lalvin QA23] gi|323356297|gb|EGA88101.1| Ola1p [Saccharomyces cerevisiae VL3] gi|1587583|prf||2206497F ORF YBR0309 Length = 394 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 28/135 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTL----------YPNLGIVKEGYKE-- 207 GI+GL N GKSTF ++TR P A+YPF T+ P + E YK+ Sbjct: 24 GIVGLANVGKSTFFQAITRCPLGNP--ANYPFATIDPEEARVIVPSPRFDKLCEIYKKTA 81 Query: 208 ------FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQC 257 + DI G+ K A G G+G+ FL H + +V ++ +V+ Sbjct: 82 SEVPAHLTVYDIAGLTKGASAGEGLGNAFLSHIRSVDSIYQVVRCFDDAEIIHVEGDVDP 141 Query: 258 ILDELSAYNSELRKK 272 + D L N ELR K Sbjct: 142 VRD-LEIINQELRLK 155 >gi|330831012|ref|YP_004393964.1| GTPase, HflX [Aeromonas veronii B565] gi|328806148|gb|AEB51347.1| GTPase, HflX [Aeromonas veronii B565] Length = 428 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 5/111 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 + + ++G NAGKST +T A AD F TL P L +V + ILAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNQLTAASVYAADQLFATLDPTLRNLVIRDVGDVILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSA 264 ++ H L+ T +LLH+V +E +Q + Q +L E+ A Sbjct: 257 RHLPHDLVAAFKATLQETREADLLLHVVDCADEQMQENIDSVQQVLAEIEA 307 >gi|146102251|ref|XP_001469318.1| GTP-binding protein [Leishmania infantum] gi|134073687|emb|CAM72424.1| putative GTP-binding protein [Leishmania infantum JPCM5] Length = 374 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 50/92 (54%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 ++G P+ GKS+FL+ VT+ + + A Y FTTL G + E + D+PGII+ A + Sbjct: 68 ALVGFPSVGKSSFLSRVTQTESEAAGYEFTTLTCIPGKLMHKGTEIQILDLPGIIEGAAE 127 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 G G G + + +++ ++ A + Q + Sbjct: 128 GKGRGRQVIATARTADMIILMLDAAKAEAQRS 159 >gi|322503341|emb|CBZ38426.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 374 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 50/92 (54%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 ++G P+ GKS+FL+ VT+ + + A Y FTTL G + E + D+PGII+ A + Sbjct: 68 ALVGFPSVGKSSFLSRVTQTESEAAGYEFTTLTCIPGKLMHKGTEIQILDLPGIIEGAAE 127 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 G G G + + +++ ++ A + Q + Sbjct: 128 GKGRGRQVIATARTADMIILMLDAAKAEAQRS 159 >gi|269103606|ref|ZP_06156303.1| GTP-binding protein HflX [Photobacterium damselae subsp. damselae CIP 102761] gi|268163504|gb|EEZ42000.1| GTP-binding protein HflX [Photobacterium damselae subsp. damselae CIP 102761] Length = 429 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 7/114 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L V+ ILAD G I Sbjct: 197 IPTISLVGYTNAGKSTLFNRITDAGVYAADQLFATLDPTLRKVEVADVGTAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYN 266 ++ H LK T+ +LLH+V A EN+ A + +L+E+ A+ Sbjct: 257 RHLPHDLVAAFKATLKETQEADLLLHVVDASDDRFRENIDAV-ESVLEEIEAHE 309 >gi|221113417|ref|XP_002170722.1| PREDICTED: similar to GTP-binding protein 10, partial [Hydra magnipapillata] Length = 100 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 9/95 (9%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCILDEL----- 262 + D+PG+I++AH G+G RFL+H ERT V+ + ++ + N ++ D + Sbjct: 3 VVDLPGLIEDAHLNKGMGHRFLRHIERTKVITLVIDINGFQLNSDVPHRTPFDTVLLLLK 62 Query: 263 --SAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 + Y L K+ + L+++D +DS T A +N+ Sbjct: 63 ELALYEDLLLKRPSFIVLNKMDCLDSKTKANMRNK 97 >gi|169837624|ref|ZP_02870812.1| SPO0B-associated GTP-binding protein [candidate division TM7 single-cell isolate TM7a] Length = 87 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 19/31 (61%), Positives = 27/31 (87%) Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTER 236 + F++AD+PG+I+ AH+G G+GDRFLKH ER Sbjct: 5 ESFVVADVPGLIEGAHEGVGLGDRFLKHIER 35 >gi|296424863|ref|XP_002841965.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638218|emb|CAZ86156.1| unnamed protein product [Tuber melanosporum] Length = 394 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/137 (31%), Positives = 61/137 (44%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST ++TR A++PF T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITRCSLGNPANFPFATIDPEEARVIVPDERYDWLCEHYKPISKV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPVRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L N ELR K IE V Sbjct: 144 -LQIINDELRIKDIEFV 159 >gi|209881584|ref|XP_002142230.1| GTP-binding protein [Cryptosporidium muris RN66] gi|209557836|gb|EEA07881.1| GTP-binding protein, putative [Cryptosporidium muris RN66] Length = 396 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 17/104 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFI--------- 209 +G++GLPN GKST + + ++PF T+ P+ + + E ++ Sbjct: 23 MGLVGLPNVGKSTTFNLLCKQAVPAENFPFCTIEPHEARMNVPDERFRTLCRYFKPKSEV 82 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + DI G++ AH+G G+G+ FL + + + H+V A E Sbjct: 83 PATLTIFDIAGLVPGAHKGEGLGNAFLSNIQAVDGIYHVVRAFE 126 >gi|45190415|ref|NP_984669.1| AEL192Wp [Ashbya gossypii ATCC 10895] gi|44983311|gb|AAS52493.1| AEL192Wp [Ashbya gossypii ATCC 10895] Length = 393 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 27/134 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTL----------YPNLGIVKEGYK--- 206 GI+GL N GKSTF ++TR P A+YPF T+ P + + YK Sbjct: 24 GIVGLANVGKSTFFQAITRCPLGNP--ANYPFATIDPEEARVIVPSPRFDSLCDVYKPAS 81 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCI 258 + DI G+ K A +G G+G+ FL H + +V ++ +++ + Sbjct: 82 KVPAHLTVYDIAGLTKGASKGEGLGNAFLSHIRSVDSIYQVVRCFDDAEIIHIEGDVDPV 141 Query: 259 LDELSAYNSELRKK 272 D L N+ELR K Sbjct: 142 RD-LDIINTELRLK 154 >gi|221102951|ref|XP_002166536.1| PREDICTED: similar to GTP-binding protein DRG [Hydra magnipapillata] Length = 263 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 41/70 (58%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ A Sbjct: 67 IGFVGFPSVGKSTLLSNLAGVYSEVASYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEGAK 126 Query: 222 QGAGIGDRFL 231 G G G + + Sbjct: 127 DGKGRGKQVI 136 >gi|220926315|ref|YP_002501617.1| GTP-binding proten HflX [Methylobacterium nodulans ORS 2060] gi|219950922|gb|ACL61314.1| GTP-binding proten HflX [Methylobacterium nodulans ORS 2060] Length = 471 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 9/175 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILADIPGIIKNA 220 + ++G NAGKST +T A+ + D F TL P +K + E IL+D G I + Sbjct: 234 VALVGYTNAGKSTLFNRLTAAEVRAEDLLFATLDPTARAIKLPHGETAILSDTVGFISDL 293 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIV 276 R L+ LLH+ E+ QA Q +L EL E + IE+ Sbjct: 294 PTMLIAAFRATLEDVIEADFLLHVRDMAHEDTQAQGQDVQAVLAELG-IAPETDRIIEV- 351 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 ++ D +D+ R N L+ Q G P S++TG G ++L + +I R Sbjct: 352 -WNKADLLDAPERERLLN-LSRQAGAKPVLISALTGEGTDRLLARIEARIAESRA 404 >gi|148642775|ref|YP_001273288.1| GTPase [Methanobrevibacter smithii ATCC 35061] gi|148551792|gb|ABQ86920.1| predicted GTPase [Methanobrevibacter smithii ATCC 35061] Length = 220 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L +T A+ K+ Y FTTL G+++ + + DIPGII Sbjct: 62 ATVVLVGFPSVGKSTLLNELTNAESKVGAYQFTTLDIVPGVMEYKNAKIQVFDIPGIITG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSAL 247 A G G G L +++ ++ L Sbjct: 122 ASTGKGRGREILSVARTAELIVVVLDVL 149 >gi|116180204|ref|XP_001219951.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] gi|88185027|gb|EAQ92495.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] Length = 414 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 28/109 (25%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P+AGKS+ L S+T A K+ FTT+ PN Sbjct: 7 IGLVGKPSAGKSSTLNSLTDASSKVGG--FTTIDPQRAIGYLQIDCACARHGVSDRCRPN 64 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G +G + L D+ G++ AHQG G+G++FL L+H+V Sbjct: 65 YGACVDGRRSVPIELLDVAGLVPGAHQGKGLGNKFLDDLRHADALIHVV 113 >gi|269986493|gb|EEZ92778.1| GTP-binding protein HSR1-related protein [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 379 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 30/110 (27%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------------ 209 IGIIG N GKST ++T + +I D PFTT+ PN G+ GY I Sbjct: 3 IGIIGRTNVGKSTLFKALTLEEVEIEDRPFTTIEPNKGV---GYVNVICPEKDFNVKCTP 59 Query: 210 ---------------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + D+ G+++ A +G G+G++FL + ++ ++ Sbjct: 60 HNAPCIDGIRFVPINIIDVAGLVEGASEGKGLGNKFLNDIMQADAIIEVI 109 >gi|2222777|emb|CAA74319.1| GTP-binding protein [Teladorsagia circumcincta] Length = 140 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 42/72 (58%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 63 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFL 231 A G G G + + Sbjct: 123 AKDGKGRGKQVI 134 >gi|319651594|ref|ZP_08005721.1| era protein [Bacillus sp. 2_A_57_CT2] gi|317396661|gb|EFV77372.1| era protein [Bacillus sp. 2_A_57_CT2] Length = 306 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 19/154 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I IIG PN GKSTFL V K I +D P TT G++ +FI D PGI K Sbjct: 15 ISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTNDAQFIFIDTPGIHKPK 74 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T V+L +V+A +E + IL++ + + + + Sbjct: 75 HK---LGDFMMKVAQNTLKEVDVILFMVNA-QEGFGRGEEFILEKFQSVRTPI-----FL 125 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSI 310 +++ID V D L + + + +EFS I Sbjct: 126 VINKIDQVHPDELLK-----IIESYKEKYEFSEI 154 >gi|255087368|ref|XP_002505607.1| predicted protein [Micromonas sp. RCC299] gi|226520877|gb|ACO66865.1| predicted protein [Micromonas sp. RCC299] Length = 292 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 8/128 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PNAGKST L + K I + P TT + LGIV E + + +L D PG++K Sbjct: 6 VAIVGRPNAGKSTLLNQLVGTKLSIVTFKPQTTRHRILGIVSEDHYQMVLLDTPGVMKEE 65 Query: 221 HQGAGIGDRFLKHTERTH----VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK VLL IV A + A++ +L E A + L I Sbjct: 66 FN--KLDEMMLKSVRNAMANADVLLAIVDATRDPY-GAFEGLLPEHRANPAPLGVIINKC 122 Query: 277 GLSQIDTV 284 L Q+D + Sbjct: 123 DLLQVDEI 130 >gi|327401864|ref|YP_004342703.1| Nucleolar GTP-binding-1 domain-containing protein [Archaeoglobus veneficus SNP6] gi|327317372|gb|AEA47988.1| Nucleolar GTP-binding-1 domain protein [Archaeoglobus veneficus SNP6] Length = 326 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 27/176 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII-KN 219 + + G PN GKS+F+A ++ +P+IA YPFTT +GI +G + + D PG++ + Sbjct: 157 VVVAGYPNVGKSSFVARISTVQPEIATYPFTTKEIYVGIADIDGRVQVV--DTPGLLDRP 214 Query: 220 AHQGAGIGDR---FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ I R LKH +L I+ E Y+ I +LS Sbjct: 215 IHKRNPIERRAILCLKHL--ADCILFIIDPTE---TCGYR-IESQLSL------------ 256 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 L ++ T++ +A +P FSS+TG GI +++E + + + S R E Sbjct: 257 -LEEVKTLEKPVIAVYSKADMHDRRDLP-AFSSVTGEGIEEVVELIREVLKSRRSE 310 >gi|39944190|ref|XP_361632.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] gi|145014836|gb|EDJ99404.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] Length = 415 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 28/111 (25%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P+AGKS+ L S+T A K+ FTT+ PN Sbjct: 7 IGLVGKPSAGKSSTLNSLTDATSKVGR--FTTIDPQRAIGYLQIDCACARHGLQDRCKPN 64 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G +G + L D+ G++ AHQG G+G++FL L+H+V A Sbjct: 65 HGSCVDGRRSVPIELLDVAGLVPGAHQGKGLGNKFLDDLRHADALIHVVDA 115 >gi|297619420|ref|YP_003707525.1| small GTP-binding protein [Methanococcus voltae A3] gi|297378397|gb|ADI36552.1| small GTP-binding protein [Methanococcus voltae A3] Length = 354 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 18/111 (16%) Query: 140 YANPGILG--QEKIIWL-KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP 196 Y N LG Q K+ + +K + + I G PN GKST L ++T A+P++ YPFTT Sbjct: 153 YPNLAFLGVAQNKLKNIPTVKDLPSVVIAGYPNVGKSTLLKTITNAEPEVNTYPFTTKGL 212 Query: 197 NLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 N+G EG + + D PG++ DR + ER + LH V A+ Sbjct: 213 NIGYTDEGIQ---IVDTPGVL----------DRPI--YERNDIELHAVIAI 248 >gi|268325198|emb|CBH38786.1| conserved hypothetical protein, GTPase family [uncultured archaeon] Length = 366 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 9/113 (7%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL--YPNLGIVKEGYKEFILADIPGII 217 A I ++G P+ GKST L +T ++A Y FTTL P I K +F+ D+PG+I Sbjct: 64 ATIVLVGFPSVGKSTLLNRLTGTSAEVAAYEFTTLEVIPGTLIYKGAQLQFL--DVPGLI 121 Query: 218 KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR 270 + A G G G + ++L +V + Q Y +L EL Y++ +R Sbjct: 122 QGAAAGRGHGKEVISVMRNADLILILVDVFQ---QQQYDILLKEL--YDAGIR 169 >gi|255730541|ref|XP_002550195.1| hypothetical protein CTRG_04493 [Candida tropicalis MYA-3404] gi|240132152|gb|EER31710.1| hypothetical protein CTRG_04493 [Candida tropicalis MYA-3404] Length = 396 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 22/107 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTL----------YPNLGIVKEGYKE-- 207 GI+GL N GKSTF +VTR P A+YPF T+ P + E YK Sbjct: 25 GIVGLANVGKSTFFQAVTRCPLGNP--ANYPFATIDPEEARVIVPSPRFDKLCELYKPKS 82 Query: 208 -----FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+ K AH G G+G+ FL + + +V ++ Sbjct: 83 EVPAFLTVYDIAGLTKGAHAGEGLGNNFLSNIRAVDSIFQMVRCFDD 129 >gi|127511501|ref|YP_001092698.1| GTP-binding protein, HSR1-related [Shewanella loihica PV-4] gi|126636796|gb|ABO22439.1| GTP-binding protein, HSR1-related [Shewanella loihica PV-4] Length = 432 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 4/110 (3%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A + ++G NAGKST ++T ++ AD F TL P L + ILAD G I+ Sbjct: 197 LATVSLVGYTNAGKSTLFNALTVSEVYAADQLFATLDPTLRKLDLQDGSVILADTVGFIR 256 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY---QCILDELSA 264 + H L+ T +LLH+V + +EN+ + Q +L E+ A Sbjct: 257 HLPHDLVAAFKATLQETREADLLLHVVDSADENMGDNFEQVQLVLKEIGA 306 >gi|300784296|ref|YP_003764587.1| GTP-binding protein HflX [Amycolatopsis mediterranei U32] gi|299793810|gb|ADJ44185.1| GTP-binding protein HflX [Amycolatopsis mediterranei U32] Length = 482 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 13/174 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I+G NAGKS+ L ++T A + D F TL P + + + L D G + Sbjct: 254 VPSVAIVGYTNAGKSSLLNALTGAGVLVEDALFATLDPTTRRAQTPDGRGYTLTDTVGFV 313 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVS----ALEENVQAAYQCILDELSAYNSELRKK 272 ++ HQ L+ +L+H+V A EE V A + +L E++ E Sbjct: 314 RHLPHQLVDAFRSTLEEAADADLLVHVVDGSDPAPEEQVSAVRE-VLGEITRKRKEPLPP 372 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E++ +++ D D +LAR ++ LA G V + S+ TG GI +++E + D++ Sbjct: 373 -ELLVINKTDASDEVSLARLRHALA---GSV--QVSARTGAGIAELVEVIADRL 420 >gi|13877991|gb|AAK44073.1|AF370258_1 putative developmentally regulated GTP-binding protein [Arabidopsis thaliana] Length = 399 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 2/110 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L +T + A FTTL G++ + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASCEFTTLTCIPGVIHYNDTKIQLLDLPGIIEGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 +G G G + + + + ++L ++ A + Q + EL A L K Sbjct: 125 EGKGRGRQVIAVAKSSDLVLMVLDA--SKSEGHRQILTKELEAVGLRLNK 172 >gi|206901698|ref|YP_002251036.1| GTP-binding protein Era [Dictyoglomus thermophilum H-6-12] gi|206740801|gb|ACI19859.1| GTP-binding protein Era [Dictyoglomus thermophilum H-6-12] Length = 297 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 22/185 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 +A IGI+G PNAGKST + + K I AD P TT LG++ +FI D PG Sbjct: 6 LAYIGIVGKPNAGKSTLINLLVGEKVSIVADKPQTTRQRILGVLTLEDAQFIFLDTPGWF 65 Query: 218 KNAHQGAGIGDRFLKHT-ERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKKI 273 H + +K T E + ++L+++ + L+E+ + + + D+ Y Sbjct: 66 PPKHLLGEYMQKTIKKTIEDSDIVLYVIDSSVELDEDNRTLLKFVKDQGKPY-------- 117 Query: 274 EIVGLSQIDTVDSDTLARKKNE---LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +V L++ID V L +K E L + ++ E S++ G E L +K+ I Sbjct: 118 -LVLLNKIDMVSPKVLEERKKEVISLGVEEERI-MEISALYGTN----KELLIEKLKEIA 171 Query: 331 GENEF 335 E +F Sbjct: 172 PEGDF 176 >gi|295395416|ref|ZP_06805615.1| GTP-binding protein HflX [Brevibacterium mcbrellneri ATCC 49030] gi|294971738|gb|EFG47614.1| GTP-binding protein HflX [Brevibacterium mcbrellneri ATCC 49030] Length = 510 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 76/174 (43%), Gaps = 21/174 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY----KEFILADIP 214 + + I+G NAGKS+ L +T A + + F TL P V++ + + F D Sbjct: 281 VPSVAIVGYTNAGKSSLLNRLTDAGVMVKNELFATLDPT---VRQAHTADGRVFTYTDTV 337 Query: 215 GIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELR 270 G ++N HQ L+ +LLHIV A + A A +LDE + Sbjct: 338 GFVRNLPHQLVEAFRSTLEEAADADLLLHIVDASHTDPLAQIKAVHEVLDEAQTIDIP-- 395 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 E++ ++ D DSDTLAR N S+ TG GI ++ E + D Sbjct: 396 ---ELIVFNKADIADSDTLARVLNTYPNAVV-----VSAHTGQGIDELRERIDD 441 >gi|207347779|gb|EDZ73849.1| YBR025Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 370 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 28/135 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTL----------YPNLGIVKEGYKE-- 207 GI+GL N GKSTF ++TR P A+YPF T+ P + E YK+ Sbjct: 24 GIVGLANVGKSTFFQAITRCPLGNP--ANYPFATIDPEEARVIVPSPRFDKLCEIYKKTA 81 Query: 208 ------FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQC 257 + DI G+ K A G G+G+ FL H + +V ++ +V+ Sbjct: 82 SEVPAHLTVYDIAGLTKGASAGEGLGNAFLSHIRSVDSIYQVVRCFDDAEIIHVEGDVDP 141 Query: 258 ILDELSAYNSELRKK 272 + D L N ELR K Sbjct: 142 VRD-LEIINQELRLK 155 >gi|73669657|ref|YP_305672.1| GTP-binding protein [Methanosarcina barkeri str. Fusaro] gi|72396819|gb|AAZ71092.1| GTP-binding protein [Methanosarcina barkeri str. Fusaro] Length = 333 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 20/187 (10%) Query: 146 LGQEKIIWLKLKLIAD---IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK 202 L + + I KL + D I I G PN GKS+F++ +T A P+IA YPFTT +G Sbjct: 143 LNEARNILRKLPDVQDEPTIVIAGYPNVGKSSFVSKITGANPEIAPYPFTTKGVTIGHFM 202 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-- 260 + + D PG++ DR + +ER + ++A+ + A ++D Sbjct: 203 RDSMRYQVMDTPGLL----------DRPM--SERNDIERQAITAI-HYLDAVVMFMIDPS 249 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELA-TQCGQVPFEFSSITGHGIPQIL 319 E Y E +K + +V + + + +A K + + +V F S++TG GI ++ Sbjct: 250 ESCGYEIEAQKHL-LVEIRENFKLPLLVVANKADRSEFKKLDEVEFNISTVTGEGIEDVM 308 Query: 320 ECLHDKI 326 L I Sbjct: 309 NRLMQMI 315 >gi|167520332|ref|XP_001744505.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776836|gb|EDQ90454.1| predicted protein [Monosiga brevicollis MX1] Length = 366 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 43/72 (59%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 63 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIQYKGAKIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFL 231 A+ G G G + + Sbjct: 123 ANDGKGRGRQVI 134 >gi|326433320|gb|EGD78890.1| hypothetical protein PTSG_01866 [Salpingoeca sp. ATCC 50818] Length = 366 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 44/85 (51%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L+ VT + A Y FTTL G + L D+PGII+ A Sbjct: 66 VVMIGFPSVGKSTLLSKVTTTESVSAAYAFTTLTCVPGKLNYRGATIQLLDLPGIIEGAS 125 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSA 246 QG G G + + V+L ++ A Sbjct: 126 QGKGRGKQVIAVARTADVVLMMLDA 150 >gi|270265000|ref|ZP_06193263.1| hypothetical protein SOD_k00360 [Serratia odorifera 4Rx13] gi|270040934|gb|EFA14035.1| hypothetical protein SOD_k00360 [Serratia odorifera 4Rx13] Length = 426 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 7/170 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A AD F TL P L + + +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRITSADVYAADQLFATLDPTLRRIDVADVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ H L+ T + +LLH++ A + V + + L+ S+ + ++ Sbjct: 257 RHLPHDLVAAFKATLQETRQASLLLHVIDAADTRVDENIEAVNTVLAEIESD--EIPTLL 314 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ID +D +N+ + + S+ +G GIP + + L +++ Sbjct: 315 VMNKIDMLDDFVPRIDRND---ENLPIRVWLSAASGEGIPLLYQALTERL 361 >gi|239831497|ref|ZP_04679826.1| GTP-binding protein Era [Ochrobactrum intermedium LMG 3301] gi|239823764|gb|EEQ95332.1| GTP-binding protein Era [Ochrobactrum intermedium LMG 3301] Length = 311 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 77/180 (42%), Gaps = 33/180 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI---- 216 + +IG PNAGKST + + K I + TT GI EG + +L D PGI Sbjct: 22 VALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPAQIVLVDTPGIFRPK 81 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 + A GA D L VLL L EN +A + D + Sbjct: 82 RRLDRAMVTTAWGGAKDADIIL-------VLLDSQGGLNENAEALLSSMKD--------V 126 Query: 270 RKKIEIVGLSQIDTVDSDT---LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 R+K +++ L+++D VD LARK NEL F S++ G G + + L D + Sbjct: 127 RQK-KVLVLNKVDRVDPPVLLDLARKANELV--AFDQTFMVSALNGSGCKDLAKYLADNV 183 >gi|255729566|ref|XP_002549708.1| GTP-binding protein 128up [Candida tropicalis MYA-3404] gi|240132777|gb|EER32334.1| GTP-binding protein 128up [Candida tropicalis MYA-3404] Length = 368 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G +G P+ GKST L+ +T + A Y FTTL G +K + + D+PGII+ Sbjct: 64 VATVGFVGFPSVGKSTLLSKLTGTHSEAAAYEFTTLTTVPGTIKYKGAKIQMLDLPGIIE 123 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + ++L ++ Sbjct: 124 GAKDGKGRGRQVIAVARSVNLLFLVL 149 >gi|71407364|ref|XP_806155.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70869816|gb|EAN84304.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 884 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 35/118 (29%) Query: 162 IGIIGLPNAGKSTFLASVT-----RAKPKIADYPFTTLYPNL------------------ 198 IG+IG P+AGKSTF +VT K+A +PFTT+ PN+ Sbjct: 461 IGLIGKPSAGKSTFFNAVTDPDSESKAAKVAAFPFTTIEPNVSAGFGAVFCPCCILSTSS 520 Query: 199 -------GIVKEG-----YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G V G I+ D+ G+++ A++G G G++FL VL+H+V Sbjct: 521 SPCDAMYGHVPVGGALCRRHPVIIKDVAGLVQGAYKGKGKGNQFLNDLCDASVLVHVV 578 >gi|255021658|ref|ZP_05293700.1| GTP-binding protein HflX [Acidithiobacillus caldus ATCC 51756] gi|254968918|gb|EET26438.1| GTP-binding protein HflX [Acidithiobacillus caldus ATCC 51756] Length = 426 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 15/178 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGI 216 + + ++G NAGKST +T +AD F TL P + ++ +G E++LAD G Sbjct: 187 VPTVALVGYTNAGKSTLFNRLTANHQYVADQLFATLDPAVRRLQFGKGRGEWLLADTVGF 246 Query: 217 IKNAHQGAGIGDR-FLKHTERTHVLLHIV--SALEENVQ-AAYQCILDELSAYNSELRKK 272 +++ R L+ R +LLH+V SA++ +Q AA +L E+ A Sbjct: 247 LRDLPTELIAAFRATLEEVNRADLLLHVVDASAVDRELQMAAVDAVLAEIGAAEVP---- 302 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +V +++D + + A Q S++TG G+ +++ + ++I R Sbjct: 303 -RLVVYNKVDRTGERVGPVRDSSGAVQA----LRLSAVTGEGLSELVATVRERIAPAR 355 >gi|156937836|ref|YP_001435632.1| small GTP-binding protein [Ignicoccus hospitalis KIN4/I] gi|156566820|gb|ABU82225.1| small GTP-binding protein [Ignicoccus hospitalis KIN4/I] Length = 341 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 17/155 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA- 220 I + G+P++GKS+F+ +V+ A+ ++A YPFTT +LG + G + F + D PGI+ Sbjct: 168 IVVAGMPSSGKSSFVKAVSTAEVEVASYPFTTKQVHLGHFERGGRRFQVVDTPGILDRPW 227 Query: 221 ------HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC-ILDELSAYNSELRKKI 273 + A I R L +VLL + EE Q +LD + N ++K+ Sbjct: 228 DSLNEIERKAVIAIRHL-----PNVLLFLYDVSEEGYGVEEQTEVLD--NVINVVGKEKV 280 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFS 308 +V L++ID + + + E A++ G F+ S Sbjct: 281 -VVALNKIDVANERKVELAEEE-ASRRGLRTFKLS 313 >gi|119178788|ref|XP_001241033.1| hypothetical protein CIMG_08196 [Coccidioides immitis RS] Length = 656 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL S+TRA + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLKSITRADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC + D++ +NS K+ + Sbjct: 232 MNTIE-----MQSITAIAHLRSAILYFMDLSEQCGYSVSDQIKLFNSIKPLFSNKLVFIV 286 Query: 278 LSQIDTVDSDTL--ARKK--NELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + + L A K+ ++L T G + S T G+ + D++ + R Sbjct: 287 VNKIDVMRPEDLDPATKEELDKLLTISGVEMLQLSCTTTEGVTAVKNAACDRLIAER 343 >gi|221105197|ref|XP_002170544.1| PREDICTED: similar to Obg-like ATPase 1, partial [Hydra magnipapillata] Length = 324 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 23/112 (20%) Query: 161 DIGIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK----------------- 202 + GI+GLPN GKST F A A + A++PF T+ PN+G V Sbjct: 4 NCGIVGLPNVGKSTLFNALTATAAAQAANFPFCTIEPNVGRVAVPDERLAPLAEIGKSIN 63 Query: 203 --EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 EF+ DI G++K A +G G+G++FL + + ++H++ +EN+ Sbjct: 64 ILPTQLEFV--DIAGLVKGASKGEGLGNKFLANIRQVDAIVHVLRCFDDENI 113 >gi|315052064|ref|XP_003175406.1| nucleolar GTP-binding protein 1 [Arthroderma gypseum CBS 118893] gi|311340721|gb|EFQ99923.1| nucleolar GTP-binding protein 1 [Arthroderma gypseum CBS 118893] Length = 653 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL SVT+A + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLRSVTKADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC ++D+L +NS K+ + Sbjct: 232 MNTIE-----MQSITAIAHLRSAILYFMDLSEQCGYSVMDQLKLFNSIKPLFSNKLVFIV 286 Query: 278 LSQIDTVDSDTLARKKNE----LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + + L + E + G + S T G+ + D++ + R Sbjct: 287 INKIDVMRPEDLDPETQEQLQAVLKSAGVEMLQLSCATTEGVTAVKNAACDRLIAER 343 >gi|300711068|ref|YP_003736882.1| small GTP-binding protein [Halalkalicoccus jeotgali B3] gi|299124751|gb|ADJ15090.1| small GTP-binding protein [Halalkalicoccus jeotgali B3] Length = 369 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 5/120 (4%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L ++T A+ ++ Y FTTL N G+++ + D+PG+I+ Sbjct: 61 ATVALVGFPSVGKSTLLNALTNAESEVGSYEFTTLNVNPGMLQYRGANIQIMDVPGLIEG 120 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G L ++++++S E + Y+ + +EL Y +++R E LS Sbjct: 121 AASGRGGGREVLSVVRAADLVVYVLSVFEID---QYERLSEEL--YANKVRLDTEPPSLS 175 >gi|147673365|ref|YP_001218617.1| putative GTPase HflX [Vibrio cholerae O395] gi|262166926|ref|ZP_06034646.1| GTP-binding protein HflX [Vibrio cholerae RC27] gi|146315248|gb|ABQ19787.1| GTP-binding protein HflX [Vibrio cholerae O395] gi|227012204|gb|ACP08414.1| GTP-binding protein HflX [Vibrio cholerae O395] gi|262024631|gb|EEY43312.1| GTP-binding protein HflX [Vibrio cholerae RC27] Length = 429 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 23/180 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL---GIVKEGYKEFILADIPG 215 I I ++G NAGKST +T A AD F TL P L +V G +LAD G Sbjct: 197 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIDLVDVGPA--VLADTVG 254 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELR 270 I++ H L+ T+ +LLH+V A EN+QA + +L E+ A+ Sbjct: 255 FIRHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAV-ETVLQEIDAHEVPT- 312 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFS 328 ++ +++ID ++ + ++++ VP S++ G G + E L +++ S Sbjct: 313 ----LLVMNKIDNLEEQSPRIERDDEG-----VPRVVWISAMQGAGTELLFEALSERLAS 363 >gi|303310090|ref|XP_003065058.1| nucleolar GTP-binding protein, putative [Coccidioides posadasii C735 delta SOWgp] gi|240104717|gb|EER22913.1| nucleolar GTP-binding protein, putative [Coccidioides posadasii C735 delta SOWgp] gi|320033226|gb|EFW15175.1| nucleolar GTP-binding protein [Coccidioides posadasii str. Silveira] Length = 656 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL S+TRA + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLKSITRADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC + D++ +NS K+ + Sbjct: 232 MNTIE-----MQSITAIAHLRSAILYFMDLSEQCGYSVSDQIKLFNSIKPLFSNKLVFIV 286 Query: 278 LSQIDTVDSDTL--ARKK--NELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + + L A K+ ++L T G + S T G+ + D++ + R Sbjct: 287 VNKIDVMRPEDLDPATKEELDKLLTISGVEMLQLSCTTTEGVTAVKNAACDRLIAER 343 >gi|294938928|ref|XP_002782254.1| GTP-dependent nucleic acid-binding protein engD, putative [Perkinsus marinus ATCC 50983] gi|239893782|gb|EER14049.1| GTP-dependent nucleic acid-binding protein engD, putative [Perkinsus marinus ATCC 50983] Length = 414 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNL-----------------GIVKEG 204 G++G PN GKST ++ A+ + A++PF T+ PN+ G ++ Sbjct: 35 GLVGYPNVGKSTTFNAIIGAQLAEAANFPFCTIEPNISKASVPDPLLDELARVEGSARKV 94 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + + DI G++K A +G G+G+ FL + H ++ +V ++ Sbjct: 95 PGQLEVRDIAGLVKGASEGQGMGNSFLANIRHVHCIIQVVRCFSDS 140 >gi|149910175|ref|ZP_01898821.1| HflX, putative GTPase subunit of protease with nucleoside triPhydrolase domain [Moritella sp. PE36] gi|149806761|gb|EDM66725.1| HflX, putative GTPase subunit of protease with nucleoside triPhydrolase domain [Moritella sp. PE36] Length = 429 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 2/100 (2%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADI 213 K + I I ++G NAGKST +T AK AD F TL P L + E +LAD Sbjct: 193 KRREIPTISLVGYTNAGKSTLFNRLTDAKVYAADQLFATLDPTLRRLTVADVGEVVLADT 252 Query: 214 PGIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 G I++ H L T +LLH++ +EN++ Sbjct: 253 VGFIRHLPHDLVAAFKATLTETREADLLLHVIDCADENMR 292 >gi|209696182|ref|YP_002264112.1| putative GTPase HflX [Aliivibrio salmonicida LFI1238] gi|208010135|emb|CAQ80460.1| HflX protein, putative GTP-binding protein [Aliivibrio salmonicida LFI1238] Length = 439 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 17/175 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L I ILAD G I Sbjct: 197 IPTISLVGYTNAGKSTLFNRITDAGVYAADQLFATLDPTLRKIDVTDVGTAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T+ ++LLH+V A EN++A +L+E+ A Sbjct: 257 RHLPHDLVAAFKATLQETQEANILLHVVDASDERFRENIEAV-DIVLEEIDANEVPY--- 312 Query: 273 IEIVGLSQIDTV-DSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID + D + E +C V S++ G GI + + L +++ Sbjct: 313 --LLVMNKIDDLEDQQPRIDRDEEGVPRCVWV----SAMEGEGIDLLFQALTERL 361 >gi|320582103|gb|EFW96321.1| GTP binding protein, putative [Pichia angusta DL-1] Length = 366 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 1/91 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 IG IG P+ GKST L+ +T + A Y FTTL G+++ + + D+PGII+ A Sbjct: 65 IGFIGFPSVGKSTLLSKLTGTHSEAAAYEFTTLTTVPGVIRYKGAKIQMLDLPGIIEGAK 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 G G G + + R+ L+ IV + + +Q Sbjct: 125 DGRGRGKQVIA-VARSCDLIFIVLDVNKPLQ 154 >gi|145300253|ref|YP_001143094.1| GTP-binding protein HflX [Aeromonas salmonicida subsp. salmonicida A449] gi|142853025|gb|ABO91346.1| GTP-binding protein HflX [Aeromonas salmonicida subsp. salmonicida A449] Length = 428 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 5/111 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 + + ++G NAGKST +T A AD F TL P L +V + ILAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNQLTAASVYAADQLFATLDPTLRKLVIRDVGDVILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSA 264 ++ H L+ T +LLH+V +E +Q + Q +L E+ A Sbjct: 257 RHLPHDLVAAFKATLQETREADLLLHVVDCADEQMQENIDSVQQVLAEIEA 307 >gi|157368679|ref|YP_001476668.1| putative GTPase HflX [Serratia proteamaculans 568] gi|157320443|gb|ABV39540.1| GTP-binding protein HSR1-related [Serratia proteamaculans 568] Length = 426 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 7/170 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A AD F TL P L + + +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRITSADVYAADQLFATLDPTLRRIDVADVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ H L+ T + +LLH++ A + V + + L+ S+ + ++ Sbjct: 257 RHLPHDLVAAFKATLQETRQASLLLHVIDAADTRVDENIEAVNTVLAEIESD--EIPTLL 314 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ID +D +N+ + + S+ +G GIP + + L +++ Sbjct: 315 VMNKIDMLDDFVPRIDRND---ENLPIRVWLSAASGEGIPLLYQALTERL 361 >gi|328770128|gb|EGF80170.1| hypothetical protein BATDEDRAFT_11713 [Batrachochytrium dendrobatidis JAM81] Length = 366 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G +G P+ GKST ++ +T ++ Y FTTL G++ + + D+PGII+ Sbjct: 63 VARVGFVGFPSVGKSTLMSKLTGTVSEVGAYEFTTLTTVPGVIHYKGAKIQMLDLPGIIE 122 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT L+ IV Sbjct: 123 GAKDGKGRGRQVIA-VARTCSLIFIV 147 >gi|294882635|ref|XP_002769776.1| GTP-dependent nucleic acid-binding protein engD, putative [Perkinsus marinus ATCC 50983] gi|239873525|gb|EER02494.1| GTP-dependent nucleic acid-binding protein engD, putative [Perkinsus marinus ATCC 50983] Length = 413 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNL-----------------GIVKEG 204 G++G PN GKST ++ A+ + A++PF T+ PN+ G ++ Sbjct: 34 GLVGYPNVGKSTTFNAIIGAQLAEAANFPFCTIEPNISKASVPDPLLDELAKVEGSARKV 93 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + + DI G++K A +G G+G+ FL + H ++ +V ++ Sbjct: 94 PGQLEVRDIAGLVKGASEGQGMGNSFLANIRHVHCIIQVVRCFSDS 139 >gi|163749348|ref|ZP_02156597.1| GTP-binding protein HflX [Shewanella benthica KT99] gi|161331067|gb|EDQ01993.1| GTP-binding protein HflX [Shewanella benthica KT99] Length = 430 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 4/107 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + ++G NAGKST S+T ++ AD F TL P L ++ ILAD G I++ Sbjct: 200 VSLVGYTNAGKSTLFNSLTVSEVYAADQLFATLDPTLRKLELPDGAIILADTVGFIRHLP 259 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY---QCILDELSA 264 H L+ T +LLHIV +EN+ + Q +L E+ A Sbjct: 260 HDLVAAFKSTLQETREADLLLHIVDCHDENMGDNFEQVQLVLKEIGA 306 >gi|85710755|ref|ZP_01041816.1| GTPase, HflX [Idiomarina baltica OS145] gi|85695159|gb|EAQ33096.1| GTPase, HflX [Idiomarina baltica OS145] Length = 412 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 5/111 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T + AD F TL P L ++ E ILAD G I Sbjct: 182 IPTVSLVGYTNAGKSTLFNTMTESGVYAADQLFATLDPTLRKLEVEDVGRIILADTVGFI 241 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSA 264 ++ H L+ T+ +LLH+V +E+ Q+ + +LDE+ A Sbjct: 242 RHLPHDLVAAFKATLQETQEADILLHVVDVADEHQQSNIEQVSEVLDEIGA 292 >gi|312220728|emb|CBY00669.1| similar to developmentally regulated GTP-binding protein [Leptosphaeria maculans] Length = 354 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 47/86 (54%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V+ + + D+PGII+ Sbjct: 50 VASVGFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTTVPGQVQYNGAKIQILDLPGIIQ 109 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 110 GAKDGKGRGRQVIAVAKTCHLIFIVL 135 >gi|217069832|gb|ACJ83276.1| unknown [Medicago truncatula] Length = 194 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 2/111 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L +T ++A Y FTTL GI+ + L D+PGII+ A Sbjct: 65 VSLIGFPSVGKSTLLTLLTGTHSEVASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIEGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 +G G G + + + + ++L ++ A + Q + EL A L K+ Sbjct: 125 EGKGRGRQVIAVAKSSDIVLMVLDA--SKSEGHRQILTKELEAVGLRLNKR 173 >gi|90414474|ref|ZP_01222450.1| putative GTP-binding protein HflX [Photobacterium profundum 3TCK] gi|90324479|gb|EAS41038.1| putative GTP-binding protein HflX [Photobacterium profundum 3TCK] Length = 429 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 52/111 (46%), Gaps = 5/111 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L I ILAD G I Sbjct: 197 IPTISLVGYTNAGKSTLFNRITDAGVYAADQLFATLDPTLRKIDVADVGTSILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSA 264 ++ H LK T+ +LLH+V A +E + A +LDE+ A Sbjct: 257 RHLPHDLVAAFKATLKETQEATLLLHVVDASDERFRENMDAVHLVLDEIDA 307 >gi|90424082|ref|YP_532452.1| GTP-binding protein, HSR1-related [Rhodopseudomonas palustris BisB18] gi|90106096|gb|ABD88133.1| GTP-binding protein, HSR1-related [Rhodopseudomonas palustris BisB18] Length = 461 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 14/179 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST +TRA+ + AD F TL P L + + + +L+D G I N Sbjct: 228 VALVGYTNAGKSTLFNRLTRAEVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNL 287 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG-- 277 Q L+ ++LH+ E+ A D+++A +L E G Sbjct: 288 PTQLVAAFRATLEEVLEADLILHVRDIAHEDADAQQ----DDVAAVLRQLGIDPEAGGGG 343 Query: 278 -----LSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 ++ID +D LA +N A + + P S++TG GI +L + D++ + R Sbjct: 344 RIIEVWNKIDRFAADELANLRNIAARRDPEHPCLLVSAVTGEGIDALLLAIEDRLAAAR 402 >gi|302653593|ref|XP_003018620.1| hypothetical protein TRV_07380 [Trichophyton verrucosum HKI 0517] gi|291182278|gb|EFE37975.1| hypothetical protein TRV_07380 [Trichophyton verrucosum HKI 0517] Length = 645 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL SVT+A + Y FTT +G Y F D PGI+ + + Sbjct: 164 ICGYPNVGKSSFLRSVTKADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 223 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC ++D++ +NS K+ + Sbjct: 224 MNTIE-----MQSITAIAHLRSAILYFMDLSEQCGYSVVDQIKLFNSIKPLFSNKLVFIV 278 Query: 278 LSQIDTVDSDTLARKKNE----LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + + L + E L G + S T G+ + D++ + R Sbjct: 279 INKIDVMRPEDLDPETQEQLQALLKSSGVEMLQLSCATTEGVTAVKNAACDRLIAER 335 >gi|302500744|ref|XP_003012365.1| hypothetical protein ARB_01324 [Arthroderma benhamiae CBS 112371] gi|291175923|gb|EFE31725.1| hypothetical protein ARB_01324 [Arthroderma benhamiae CBS 112371] Length = 645 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL SVT+A + Y FTT +G Y F D PGI+ + + Sbjct: 164 ICGYPNVGKSSFLRSVTKADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 223 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC ++D++ +NS K+ + Sbjct: 224 MNTIE-----MQSITAIAHLRSAILYFMDLSEQCGYSVVDQIKLFNSIKPLFSNKLVFIV 278 Query: 278 LSQIDTVDSDTLARKKNE----LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + + L + E L G + S T G+ + D++ + R Sbjct: 279 INKIDVMRPEDLDPETQEQLQALLKSSGVEMLQLSCATTEGVTAVKNAACDRLIAER 335 >gi|15640375|ref|NP_230002.1| putative GTPase HflX [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121729697|ref|ZP_01682139.1| GTP-binding protein HflX [Vibrio cholerae V52] gi|227080560|ref|YP_002809111.1| GTP-binding protein HflX [Vibrio cholerae M66-2] gi|229506856|ref|ZP_04396364.1| GTP-binding protein HflX [Vibrio cholerae BX 330286] gi|229508660|ref|ZP_04398154.1| GTP-binding protein HflX [Vibrio cholerae B33] gi|229516042|ref|ZP_04405493.1| GTP-binding protein HflX [Vibrio cholerae RC9] gi|229606370|ref|YP_002877018.1| GTPase HflX [Vibrio cholerae MJ-1236] gi|254851659|ref|ZP_05241009.1| GTP-binding protein HflX [Vibrio cholerae MO10] gi|255747148|ref|ZP_05421091.1| GTP-binding protein HflX [Vibrio cholera CIRS 101] gi|262147188|ref|ZP_06027993.1| GTP-binding protein HflX [Vibrio cholerae INDRE 91/1] gi|298501248|ref|ZP_07011046.1| GTP-binding protein HflX [Vibrio cholerae MAK 757] gi|9654764|gb|AAF93521.1| GTP-binding protein HflX [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121628548|gb|EAX61030.1| GTP-binding protein HflX [Vibrio cholerae V52] gi|227008448|gb|ACP04660.1| GTP-binding protein HflX [Vibrio cholerae M66-2] gi|229346945|gb|EEO11912.1| GTP-binding protein HflX [Vibrio cholerae RC9] gi|229354295|gb|EEO19224.1| GTP-binding protein HflX [Vibrio cholerae B33] gi|229355961|gb|EEO20880.1| GTP-binding protein HflX [Vibrio cholerae BX 330286] gi|229369025|gb|ACQ59448.1| GTP-binding protein HflX [Vibrio cholerae MJ-1236] gi|254847364|gb|EET25778.1| GTP-binding protein HflX [Vibrio cholerae MO10] gi|255735197|gb|EET90599.1| GTP-binding protein HflX [Vibrio cholera CIRS 101] gi|262031369|gb|EEY49978.1| GTP-binding protein HflX [Vibrio cholerae INDRE 91/1] gi|297540002|gb|EFH76065.1| GTP-binding protein HflX [Vibrio cholerae MAK 757] Length = 429 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 11/116 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL---GIVKEGYKEFILADIPG 215 I I ++G NAGKST +T A AD F TL P L +V G +LAD G Sbjct: 197 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIDLVDVGPA--VLADTVG 254 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYN 266 I++ H L+ T+ +LLH+V A EN+QA + +L E+ A+ Sbjct: 255 FIRHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAV-ETVLQEIDAHE 309 >gi|326476675|gb|EGE00685.1| GTP-binding protein [Trichophyton tonsurans CBS 112818] Length = 415 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 27/110 (24%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTL------------------------YP 196 IG++G P++GKST L S+T A K+ + FTT+ P Sbjct: 7 IGLVGKPSSGKSTTLNSLTDASSKVGMFLKFTTIDPQRAIGYLQVDCACSRYNLQDRCKP 66 Query: 197 NLGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 N G EG + L D+ G++ AH+G G+G++FL L+H+V Sbjct: 67 NYGGCHEGRRSVPIELLDVAGLVPGAHEGKGLGNKFLDDLRHADALIHVV 116 >gi|332666380|ref|YP_004449168.1| GTP-binding protein Era-like-protein [Haliscomenobacter hydrossis DSM 1100] gi|332335194|gb|AEE52295.1| GTP-binding protein Era-like-protein [Haliscomenobacter hydrossis DSM 1100] Length = 298 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 13/146 (8%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII-KN 219 I IIG PN GKST + A V I + P TT + +GI+ + +L+D PG++ K Sbjct: 7 INIIGHPNVGKSTLMNALVGERMSIITNKPQTTRHRIIGILSGEDFQMVLSDTPGVVDKP 66 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI---V 276 A++ + F++ T L+ +V+ + E A D L A +LRK+ E+ V Sbjct: 67 AYKMHQAMNSFVQSTFEDADLMLLVTDVLETYPAE-----DHLLA---QLRKQQEVPMFV 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQ 302 L++ID VD + LA+ + A Q Q Sbjct: 119 VLNKIDLVDEEKLAQLQQFWAEQLPQ 144 >gi|209877601|ref|XP_002140242.1| small GTP-binding domain-containing protein [Cryptosporidium muris RN66] gi|209555848|gb|EEA05893.1| small GTP-binding domain-containing protein [Cryptosporidium muris RN66] Length = 368 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 48/89 (53%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G+IG P+ GKST L +T ++A Y FTTL G+ + L D+PGII+ Sbjct: 66 ARVGLIGFPSVGKSTLLNKLTGTFSEVAAYEFTTLTCVPGVFNYKGAKIQLLDLPGIIEG 125 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + ++L ++ AL+ Sbjct: 126 AKDGKGRGRQVIGVGRTCSLILVVLDALK 154 >gi|156938152|ref|YP_001435948.1| translation-associated GTPase [Ignicoccus hospitalis KIN4/I] gi|156567136|gb|ABU82541.1| GTPase of unknown function-like protein [Ignicoccus hospitalis KIN4/I] Length = 401 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 27/111 (24%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------------- 202 +G++G N GKSTF ++ T + + + PF T+ PN+G+ Sbjct: 5 LGVVGKTNVGKSTFFSAATLVEVETENRPFVTIDPNVGVTHVRKRCAHVELGLPKCDPVD 64 Query: 203 ----EGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 +G++ FI L D+ G++ A +G G+G +FL + LL +V A Sbjct: 65 GFCLKGWR-FIPVKLVDVAGLVPGAAEGRGLGTKFLDEVRKADALLIVVDA 114 >gi|150398780|ref|YP_001322547.1| small GTP-binding protein [Methanococcus vannielii SB] gi|150011483|gb|ABR53935.1| small GTP-binding protein [Methanococcus vannielii SB] Length = 347 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 15/92 (16%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 +K + + I G PN GKST L ++T A+P++ YPFTT N+G +EG + + D PG Sbjct: 170 VKDLPSVVIAGYPNVGKSTLLKTLTNAEPEVNSYPFTTKGLNIGYTEEGIQ---IIDTPG 226 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 ++ DR + ER + LH V A+ Sbjct: 227 VL----------DRPI--YERNDIELHAVVAI 246 >gi|163794567|ref|ZP_02188538.1| Predicted GTPase, probable translation factor [alpha proteobacterium BAL199] gi|159180291|gb|EDP64814.1| Predicted GTPase, probable translation factor [alpha proteobacterium BAL199] Length = 367 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 18/109 (16%) Query: 161 DIGIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIV-----------------K 202 + GI+GLPN GKST F A A + A+YPF T+ PN G V K Sbjct: 4 NCGIVGLPNVGKSTLFNALTATAAAEAANYPFCTIEPNTGRVAVPDPRLDTLARIAKSAK 63 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENV 251 + DI G+++ A +G G+G++FL + ++H++ E V Sbjct: 64 ILPTQIEFVDIAGLVRGASKGEGLGNQFLANIREVDAVIHVLRCFEGEV 112 >gi|160876996|ref|YP_001556312.1| GTP-binding proten HflX [Shewanella baltica OS195] gi|217974859|ref|YP_002359610.1| GTP-binding proten HflX [Shewanella baltica OS223] gi|304410916|ref|ZP_07392533.1| GTP-binding proten HflX [Shewanella baltica OS183] gi|307304913|ref|ZP_07584663.1| GTP-binding proten HflX [Shewanella baltica BA175] gi|160862518|gb|ABX51052.1| GTP-binding proten HflX [Shewanella baltica OS195] gi|217499994|gb|ACK48187.1| GTP-binding proten HflX [Shewanella baltica OS223] gi|304350813|gb|EFM15214.1| GTP-binding proten HflX [Shewanella baltica OS183] gi|306912315|gb|EFN42739.1| GTP-binding proten HflX [Shewanella baltica BA175] gi|315269199|gb|ADT96052.1| GTP-binding proten HflX [Shewanella baltica OS678] Length = 435 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 4/110 (3%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 ++ + ++G NAGKST ++T + AD F TL P L + ILAD G I+ Sbjct: 197 LSTVSLVGYTNAGKSTLFNALTSSDVYAADQLFATLDPTLRKLDLPDGAVILADTVGFIR 256 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY---QCILDELSA 264 + H L+ T + +LLHIV +EN+ + Q +L ++ A Sbjct: 257 HLPHDLVAAFKATLQETRQAELLLHIVDCADENMADNFDQVQSVLKDIEA 306 >gi|71891869|ref|YP_277598.1| hypothetical protein BPEN_083 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71795975|gb|AAZ40726.1| HflX [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 428 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 7/114 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP-NLGIVKEGYKEFILADIPGII 217 + + ++G NAGKST ++T + + F TL P + IV +G + IL D G I Sbjct: 200 VPTVSLVGYTNAGKSTLFNTMTASHVYTSSKLFATLDPTSRRIVYKGVHDIILTDTVGFI 259 Query: 218 KNAHQGA-GIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYN 266 +N +G LK T + +LLH+V E+N+ + CIL L+ +N Sbjct: 260 QNLPRGLISSFQATLKETVQATLLLHVVDVADERFEQNINTVH-CILSNLNVHN 312 >gi|326485317|gb|EGE09327.1| GTP-binding protein [Trichophyton equinum CBS 127.97] Length = 416 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 27/110 (24%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTL------------------------YP 196 IG++G P++GKST L S+T A K+ + FTT+ P Sbjct: 7 IGLVGKPSSGKSTTLNSLTDASSKVGMFLKFTTIDPQRAIGYLQVDCACSRYNLQDRCKP 66 Query: 197 NLGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 N G EG + L D+ G++ AH+G G+G++FL L+H+V Sbjct: 67 NYGGCHEGRRSVPIELLDVAGLVPGAHEGKGLGNKFLDDLRHADALIHVV 116 >gi|222445730|ref|ZP_03608245.1| hypothetical protein METSMIALI_01372 [Methanobrevibacter smithii DSM 2375] gi|261349722|ref|ZP_05975139.1| developmentally-regulated GTP-binding protein 1 [Methanobrevibacter smithii DSM 2374] gi|222435295|gb|EEE42460.1| hypothetical protein METSMIALI_01372 [Methanobrevibacter smithii DSM 2375] gi|288861677|gb|EFC93975.1| developmentally-regulated GTP-binding protein 1 [Methanobrevibacter smithii DSM 2374] Length = 364 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L +T A+ K+ Y FTTL G+++ + + DIPGII Sbjct: 62 ATVVLVGFPSVGKSTLLNELTNAESKVGAYQFTTLDIVPGVMEYKNAKIQVFDIPGIITG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSAL 247 A G G G L +++ ++ L Sbjct: 122 ASTGKGRGREILSVARTAELIVVVLDVL 149 >gi|126133140|ref|XP_001383095.1| hypothetical protein PICST_81735 [Scheffersomyces stipitis CBS 6054] gi|126094920|gb|ABN65066.1| GTP-binding protein [Scheffersomyces stipitis CBS 6054] Length = 367 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 45/86 (52%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A IG +G P+ GKST L +T + A Y FTTL G +K + + D+PGII+ Sbjct: 63 VATIGFVGFPSVGKSTLLNKLTGTHSEAAAYEFTTLTTVPGTIKYKGAKIQMLDLPGIIE 122 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + ++L ++ Sbjct: 123 GAKDGKGRGRQVIAVARSVNLLFLVL 148 >gi|134045747|ref|YP_001097233.1| small GTP-binding protein [Methanococcus maripaludis C5] gi|132663372|gb|ABO35018.1| small GTP-binding protein [Methanococcus maripaludis C5] Length = 346 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 15/92 (16%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 +K + + I G PN GKST L ++T A+P++ YPFTT N+G +EG + + D PG Sbjct: 170 VKNLPSVVIAGYPNVGKSTLLRTLTDAEPEVNSYPFTTKGLNIGYTEEGIQ---IIDTPG 226 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 ++ DR + ER + LH V A+ Sbjct: 227 VL----------DRPI--YERNDIELHAVVAI 246 >gi|156937375|ref|YP_001435171.1| TGS domain-containing protein [Ignicoccus hospitalis KIN4/I] gi|156566359|gb|ABU81764.1| TGS domain protein [Ignicoccus hospitalis KIN4/I] Length = 413 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 39/57 (68%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 A + + G+PN+GKS+ +A+ TRAK +++ P+TTL P +G++ +F L + PG+ Sbjct: 110 AQVVLFGIPNSGKSSIIAATTRAKVEVSPRPYTTLVPAVGMLPFEDVQFQLVEAPGV 166 >gi|256811453|ref|YP_003128822.1| small GTP-binding protein [Methanocaldococcus fervens AG86] gi|256794653|gb|ACV25322.1| small GTP-binding protein [Methanocaldococcus fervens AG86] Length = 369 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 42/85 (49%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +G P+ GKST L +T AK ++ Y FTTL G+++ + L D PGII Sbjct: 63 ATVAFVGFPSVGKSTLLNKLTNAKSEVGAYAFTTLTIVPGVMEHKGAKIQLLDAPGIIVG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G L ++L V Sbjct: 123 ASSGKGRGTEVLSAVRSADMILLTV 147 >gi|121591397|ref|ZP_01678679.1| GTP-binding protein HflX [Vibrio cholerae 2740-80] gi|121546756|gb|EAX56929.1| GTP-binding protein HflX [Vibrio cholerae 2740-80] Length = 241 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 11/115 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL---GIVKEGYKEFILADIPG 215 I I ++G NAGKST +T A AD F TL P L +V G +LAD G Sbjct: 9 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIDLVDVGPA--VLADTVG 66 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAY 265 I++ H L+ T+ +LLH+V A EN+QA + +L E+ A+ Sbjct: 67 FIRHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAV-ETVLQEIDAH 120 >gi|295687982|ref|YP_003591675.1| GTP-binding protein YchF [Caulobacter segnis ATCC 21756] gi|295429885|gb|ADG09057.1| GTP-binding protein YchF [Caulobacter segnis ATCC 21756] Length = 366 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 18/120 (15%) Query: 162 IGIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 + I+GLPN GKST F A A + A+YPF T+ PN G V G KE Sbjct: 5 VAIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNTGDVAVPEPRLEALAKIAGSKEI 64 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 I A DI G+++ A +G G+G++FL + + + E++ + +D LS Sbjct: 65 IPARITFVDIAGLVRGASKGEGLGNQFLANIRDCDAIAFVARCFEDDDITHVEGRIDPLS 124 >gi|86158536|ref|YP_465321.1| HSR1-like GTP-binding protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85775047|gb|ABC81884.1| GTP-binding protein, HSR1-related protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 330 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 19/180 (10%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +IG N+GKS+ LA++T AKP+IA+YPFTT P G+++ + L D P + G Sbjct: 85 MIGPANSGKSSLLAALTHAKPEIAEYPFTTRDPLPGMMEFEDVQVQLVDTPAV-----GG 139 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS------------AYNSELRK 271 A + + +L ++ ++++A + LD L A S L + Sbjct: 140 AQVPAWLPQLVHGADGVLIVLDVAGDDLEAGLRATLDLLERARVRPAGRAAAAGASPLER 199 Query: 272 KIEIVG-LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 + +V L++ D D T A E A F S+ G G+ + L + IR Sbjct: 200 AVPVVVLLNRCDLDDDGTFAALARE-AVPPDLFMFSVSATRGDGLDGLRPVLFRSLHRIR 258 >gi|73668119|ref|YP_304134.1| GTP-binding protein [Methanosarcina barkeri str. Fusaro] gi|72395281|gb|AAZ69554.1| GTP-binding protein [Methanosarcina barkeri str. Fusaro] Length = 364 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 3/101 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G P+ GKST L +T A + Y FTTL G+++ D+PG++K A Sbjct: 65 VTLVGFPSVGKSTLLNKITGANSAVGAYEFTTLTVVPGVLEHKGATIQFLDVPGLVKGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 G G G + + +++ ++ + Y ++DEL Sbjct: 125 SGRGRGREVISVIRNSDMVIFLLDVFQPK---HYDVLMDEL 162 >gi|20090251|ref|NP_616326.1| GTP-binding protein [Methanosarcina acetivorans C2A] gi|19915245|gb|AAM04806.1| GTP-binding protein [Methanosarcina acetivorans C2A] Length = 338 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 16/185 (8%) Query: 146 LGQEKIIWLKLKLIAD---IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IV 201 L + + I KL + D I I G PN GKS+F++ +T A P+IA YPFTT +G + Sbjct: 144 LNEARNILRKLPDVQDEPTIVIAGYPNVGKSSFVSKITGASPEIAPYPFTTKGVTIGHFI 203 Query: 202 KEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDE 261 ++G + + + D PG++ +R + H L +V + + ++ I D+ Sbjct: 204 RDGIR-YQVMDTPGLLDRPMAERNDIER--QAITAIHFLDAVVMFIMDPSESCGYEIEDQ 260 Query: 262 LSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 +E+R+ ++ L + D RK +E + S+ITG GI ++++ Sbjct: 261 KRLL-AEIRENFDLPLLVVANKADRPEF-RKMDE-------IELNISTITGEGIEEVMDR 311 Query: 322 LHDKI 326 L + I Sbjct: 312 LLEMI 316 >gi|319427721|gb|ADV55795.1| GTP-binding proten HflX [Shewanella putrefaciens 200] Length = 435 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 3/128 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + ++G NAGKST ++T + AD F TL P L + ILAD G I++ Sbjct: 200 VSLVGYTNAGKSTLFNALTSSDVYAADQLFATLDPTLRKLDLPDGAVILADTVGFIRHLP 259 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H L+ T + +LLHIV +EN+ ++ + L +++ + ++++ ++ Sbjct: 260 HDLVAAFKATLQETRQAELLLHIVDCADENMADNFEQVQSVLKDIDAD--EVMQLIVCNK 317 Query: 281 IDTVDSDT 288 ID ++ T Sbjct: 318 IDLLEDVT 325 >gi|56755225|gb|AAW25792.1| SJCHGC02631 protein [Schistosoma japonicum] Length = 102 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 37/64 (57%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L S+T + A Y FTTL G+++ L D+PGII+ Sbjct: 6 ARVALIGFPSVGKSTLLNSLTSTHSECASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 65 Query: 220 AHQG 223 A QG Sbjct: 66 ASQG 69 >gi|261350269|ref|ZP_05975686.1| gtp-binding protein, Gtp1/obg family [Methanobrevibacter smithii DSM 2374] gi|288861054|gb|EFC93352.1| gtp-binding protein, Gtp1/obg family [Methanobrevibacter smithii DSM 2374] Length = 336 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 35/56 (62%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I I G PN GKST L ++ A P+IA+YPFTT +G V+ +K + D PG++ Sbjct: 165 IVIAGFPNVGKSTLLNQISGADPQIANYPFTTKGIQIGHVERHWKSIQIIDTPGLL 220 >gi|222445170|ref|ZP_03607685.1| hypothetical protein METSMIALI_00791 [Methanobrevibacter smithii DSM 2375] gi|222434735|gb|EEE41900.1| hypothetical protein METSMIALI_00791 [Methanobrevibacter smithii DSM 2375] Length = 336 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 35/56 (62%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I I G PN GKST L ++ A P+IA+YPFTT +G V+ +K + D PG++ Sbjct: 165 IVIAGFPNVGKSTLLNQISGADPQIANYPFTTKGIQIGHVERHWKSIQIIDTPGLL 220 >gi|148642929|ref|YP_001273442.1| GTP1/OBG family GTPase [Methanobrevibacter smithii ATCC 35061] gi|148551946|gb|ABQ87074.1| GTPase, GTP1/OBG family [Methanobrevibacter smithii ATCC 35061] Length = 336 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 35/56 (62%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I I G PN GKST L ++ A P+IA+YPFTT +G V+ +K + D PG++ Sbjct: 165 IVIAGFPNVGKSTLLNQISGADPQIANYPFTTKGIQIGHVERHWKSIQIIDTPGLL 220 >gi|45358464|ref|NP_988021.1| ATP/GTP-binding motif-containing protein [Methanococcus maripaludis S2] gi|44921222|emb|CAF30457.1| ATP/GTP-binding site motif A (P-loop):Small GTP-binding protein domain [Methanococcus maripaludis S2] Length = 345 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 15/92 (16%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 +K + + I G PN GKST L ++T A+P++ YPFTT N+G +EG + + D PG Sbjct: 170 VKNLPSVVIAGYPNVGKSTLLRTLTDAEPEVNSYPFTTKGLNIGYTEEGIQ---IIDTPG 226 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 ++ DR + ER + LH V A+ Sbjct: 227 VL----------DRPI--YERNDIELHAVVAI 246 >gi|326475063|gb|EGD99072.1| nucleolar GTP-binding protein [Trichophyton tonsurans CBS 112818] Length = 653 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL SVT+A + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLRSVTKADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC ++D++ +NS K+ + Sbjct: 232 MNTIE-----MQSITAIAHLRSAILYFMDLSEQCGYSVVDQIKLFNSIRPLFSNKLVFIV 286 Query: 278 LSQIDTVDSDTLARKKNE----LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + + L + E L G + S T G+ + D++ + R Sbjct: 287 INKIDVMRPEDLDPETQEQLQALLKSSGVEMLQLSCATTEGVTAVKNAACDRLIAER 343 >gi|326433735|gb|EGD79305.1| developmentally regulated GTP-binding protein 1 [Salpingoeca sp. ATCC 50818] Length = 324 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 63 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKVQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + RT L+ I + + + Q I EL + L K+ Sbjct: 123 AKDGKGRGRQVIA-VARTCNLIFICLDIMKPL-GHKQIIEKELEGFGIRLNKR 173 >gi|253581692|ref|ZP_04858916.1| GTP binding protein [Fusobacterium varium ATCC 27725] gi|251836041|gb|EES64578.1| GTP binding protein [Fusobacterium varium ATCC 27725] Length = 297 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 9/166 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST + + K I T N+ GI+ ++I D PGI K Sbjct: 6 IAVVGRPNVGKSTLINKLVSEKVAIVSDKAGTTRDNIKGILNLNDNQYIFIDTPGIHKAK 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H G + + ++ + V+L ++ +E + Q +++ + E +K I+ ++ Sbjct: 66 HLLGEYMTNSAIRVLKDVDVILFLLDGSQE-ISTGDQFVMERV----MEAKKTPRILVIN 120 Query: 280 QIDTVDSDTLARKKNELATQCGQ--VPFEFSSITGHGIPQILECLH 323 +ID + + L K+ E+ + G+ E S G+P++LE + Sbjct: 121 KIDKLSDEQLVAKREEVKEKLGEFDAVVEISGQYAFGLPRLLEAIE 166 >gi|258516724|ref|YP_003192946.1| GTP-binding proten HflX [Desulfotomaculum acetoxidans DSM 771] gi|257780429|gb|ACV64323.1| GTP-binding proten HflX [Desulfotomaculum acetoxidans DSM 771] Length = 414 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 8/181 (4%) Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPG 215 K + + ++G NAGKST L +T + + D F TL P ++ E ++ D G Sbjct: 192 KQVPVVSLVGYTNAGKSTLLNKLTGSDVLVEDKLFATLDPTTRQVILPNNDEILVTDTVG 251 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I+N H L+ +LLH+V + N Y+ + LS+ E+ K Sbjct: 252 FIQNLPHHLVAAFRATLEEVIEADLLLHVVDSTHPNCFEQYKAVQSVLSSL--EVENKPS 309 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 I+ L++ D + L N G S++TG G+P +LE + + R Sbjct: 310 ILVLNKADGLPKPDL----NLWINIAGTPVTAISALTGEGLPGLLETIAKNLAYRRVRTT 365 Query: 335 F 335 F Sbjct: 366 F 366 >gi|241948819|ref|XP_002417132.1| unnamed protein product [Candida dubliniensis CD36] gi|223640470|emb|CAX44722.1| unnamed protein product [Candida dubliniensis CD36] Length = 396 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 22/107 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTL----------YPNLGIVKEGYKE-- 207 GI+GL N GKSTF ++TR+ P A+YPF T+ P + E YK Sbjct: 25 GIVGLANVGKSTFFQAITRSPLGNP--ANYPFATIDPEEARVIVPSPRFDKLCELYKPKS 82 Query: 208 -----FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+ K AH G G+G+ FL + + +V ++ Sbjct: 83 EVPAFLTVYDIAGLTKGAHAGEGLGNNFLANIRAVDSIFQMVRCFDD 129 >gi|11498040|ref|NP_069264.1| GTP1/OBGfamily GTP-binding protein [Archaeoglobus fulgidus DSM 4304] gi|2650203|gb|AAB90809.1| GTP-binding protein, GTP1/OBG-family [Archaeoglobus fulgidus DSM 4304] Length = 328 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 37/62 (59%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 L+ + I + G PN GKS+ +A ++ KP++A YPFTT NLG + K + D PG Sbjct: 150 LQDLPTIVVAGYPNVGKSSLVARISTVKPEVASYPFTTKKINLGFAEFAGKRVQIIDTPG 209 Query: 216 II 217 ++ Sbjct: 210 LL 211 >gi|327298918|ref|XP_003234152.1| nucleolar GTP-binding protein [Trichophyton rubrum CBS 118892] gi|326463046|gb|EGD88499.1| nucleolar GTP-binding protein [Trichophyton rubrum CBS 118892] Length = 653 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL SVT+A + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLRSVTKADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC ++D++ +NS K+ + Sbjct: 232 MNTIE-----MQSITAIAHLRSAILYFMDLSEQCGYTVVDQIKLFNSIKPLFSNKLVFIV 286 Query: 278 LSQIDTVDSDTLARKKNE----LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + + L + E L G + S T G+ + D++ + R Sbjct: 287 INKIDVMRPEDLDPETQEQLQALLKSSGVEMLQLSCATTEGVTAVKNAACDRLIAER 343 >gi|159906136|ref|YP_001549798.1| small GTP-binding protein [Methanococcus maripaludis C6] gi|159887629|gb|ABX02566.1| small GTP-binding protein [Methanococcus maripaludis C6] Length = 346 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 15/92 (16%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 +K + + I G PN GKST L ++T A+P++ YPFTT N+G +EG + + D PG Sbjct: 170 VKNLPSVVIAGYPNVGKSTLLRTLTDAEPEVNSYPFTTKGLNIGYTEEGIQ---IIDTPG 226 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 ++ DR + ER + LH V A+ Sbjct: 227 VL----------DRPI--YERNDIELHAVVAI 246 >gi|326482303|gb|EGE06313.1| nucleolar GTP-binding protein 1 [Trichophyton equinum CBS 127.97] Length = 653 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL SVT+A + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLRSVTKADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC ++D++ +NS K+ + Sbjct: 232 MNTIE-----MQSITAIAHLRSAILYFMDLSEQCGYSVVDQIKLFNSIKPLFSNKLVFIV 286 Query: 278 LSQIDTVDSDTLARKKNE----LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + + L + E L G + S T G+ + D++ + R Sbjct: 287 INKIDVMRPEDLDPETQEQLQALLKSSGVEMLQLSCATTEGVTAVKNAACDRLIAER 343 >gi|315924978|ref|ZP_07921195.1| ferrous iron transport protein B [Pseudoramibacter alactolyticus ATCC 23263] gi|315621877|gb|EFV01841.1| ferrous iron transport protein B [Pseudoramibacter alactolyticus ATCC 23263] Length = 717 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 20/165 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN+GK+T S+T A + ++P T+ G +K G+KE +AD+PGI + Sbjct: 5 IALAGNPNSGKTTLFNSLTGANQYVGNWPGVTVEKKEGKLK-GHKEVTIADLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQ---CILDELSAYNSELRKKIEI 275 + + R ER +++IV S LE N+ Q C + + A N + +E Sbjct: 64 YTLEEVVARDYIVQERPDAIINIVDGSNLERNLYLTTQVLECGIPTVIAIN--MMDVVEK 121 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 G D +D D+L+R T C VP S++ G G+ +++E Sbjct: 122 NG----DKIDFDSLSR-----ITGCAVVP--ISAMKGTGVNELIE 155 >gi|212532023|ref|XP_002146168.1| GTP-binding protein [Penicillium marneffei ATCC 18224] gi|210071532|gb|EEA25621.1| GTP-binding protein [Penicillium marneffei ATCC 18224] Length = 413 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 28/109 (25%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L S+T A K+ FTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNSLTDASSKVG--YFTTIDPQRAIGYLQIDCACKRFNLADKCRPN 64 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G EG + L D+ G++ AH+G G+G++FL L+H+V Sbjct: 65 YGGCTEGRRSVPIELLDVAGLVPGAHEGKGLGNKFLDDLRHADALIHVV 113 >gi|213852840|ref|ZP_03382372.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 320 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 7/114 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNQITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYN 266 ++ + L+ T + +LLH+V A ++EN++A +L+E+ A+ Sbjct: 257 RHLPYDLVAAFKATLQETRQATLLLHVVDAADVRVQENIEAV-NTVLEEIDAHE 309 >gi|123496192|ref|XP_001326914.1| hypothetical protein [Trichomonas vaginalis G3] gi|121909835|gb|EAY14691.1| hypothetical protein TVAG_461080 [Trichomonas vaginalis G3] Length = 596 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 14/168 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G P+ GKS+F+ +TRA ++A +PFTT LG + + + D PG++ Sbjct: 171 IILAGAPSTGKSSFMNQITRANVEVAAFPFTTKSLYLGHTDWAFLTWQVIDTPGLLDRP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNSE---LRKKIEI 275 + R + ++H+ +A+ + + C + ++S Y+S + Sbjct: 230 ----LEKRNTIEMQSVMAMVHLRAAIVYMLDISGTCGYSVEQQVSLYHSLGEIFANRPVT 285 Query: 276 VGLSQIDTVDSDTLARKKNEL--ATQCGQVPF-EFSSITGHGIPQILE 320 V L++ D V+ D ++ + L + Q V F SS+TG G+ ++ E Sbjct: 286 VVLTKTDLVNPDNMSPEDKALIDSMQGPNVSFMRMSSMTGDGVSEVKE 333 >gi|117919051|ref|YP_868243.1| GTP-binding protein, HSR1-related [Shewanella sp. ANA-3] gi|117611383|gb|ABK46837.1| GTP-binding protein, HSR1-related [Shewanella sp. ANA-3] Length = 435 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 3/128 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + ++G NAGKST ++T + AD F TL P L + ILAD G I++ Sbjct: 200 VSLVGYTNAGKSTLFNALTSSDVYAADQLFATLDPTLRKLDLPDGAVILADTVGFIRHLP 259 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H L+ T + +LLHIV +EN+ ++ + + L ++ + +++V ++ Sbjct: 260 HDLVAAFKATLQETRQADLLLHIVDCADENMADNFEQVQNVLEDIDAA--EVMQLVVCNK 317 Query: 281 IDTVDSDT 288 ID ++ T Sbjct: 318 IDLLEDVT 325 >gi|150402075|ref|YP_001329369.1| small GTP-binding protein [Methanococcus maripaludis C7] gi|150033105|gb|ABR65218.1| small GTP-binding protein [Methanococcus maripaludis C7] Length = 346 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 15/92 (16%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 +K + + I G PN GKST L ++T A+P++ YPFTT N+G +EG + + D PG Sbjct: 170 VKNLPSVVIAGYPNVGKSTLLRTLTDAEPEVNSYPFTTKGLNIGYTEEGIQ---IIDTPG 226 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 ++ DR + ER + LH V A+ Sbjct: 227 VL----------DRPI--YERNDIELHAVVAI 246 >gi|153820530|ref|ZP_01973197.1| GTP-binding proten HflX [Vibrio cholerae NCTC 8457] gi|126508926|gb|EAZ71520.1| GTP-binding proten HflX [Vibrio cholerae NCTC 8457] Length = 318 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 11/116 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL---GIVKEGYKEFILADIPG 215 I I ++G NAGKST +T A AD F TL P L +V G +LAD G Sbjct: 197 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIDLVDVGPA--VLADTVG 254 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYN 266 I++ H L+ T+ +LLH+V A EN+QA + +L E+ A+ Sbjct: 255 FIRHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAV-ETVLQEIDAHE 309 >gi|296817913|ref|XP_002849293.1| nucleolar GTP-binding protein 1 [Arthroderma otae CBS 113480] gi|238839746|gb|EEQ29408.1| nucleolar GTP-binding protein 1 [Arthroderma otae CBS 113480] Length = 653 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL SVT+A + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLRSVTKADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC ++D+L +NS K+ + Sbjct: 232 MNTIE-----MQSITAIAHLRSAILYFMDLSEQCGYSVIDQLKLFNSIKPLFSNKLVFIV 286 Query: 278 LSQIDTVDSDTLARKKNE----LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + + L + E + G + S T G+ + D++ + R Sbjct: 287 INKIDVMRPEDLDPETQEQLQAVLKSSGVEMLQLSCATTEGVTAVKNAACDRLIAER 343 >gi|225561149|gb|EEH09430.1| GTP-binding protein [Ajellomyces capsulatus G186AR] Length = 414 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 28/109 (25%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L S+T A K+ FTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNSLTDASSKVG--AFTTIDPQRAIGYLQVDCACKRFNVSDKCKPN 64 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G EG + L D+ G++ AH+G G+G++FL L+H+V Sbjct: 65 YGGCHEGRRSVPIELLDVAGLVPGAHEGKGLGNKFLDDLRHADALVHVV 113 >gi|242785138|ref|XP_002480532.1| GTP binding protein, putative [Talaromyces stipitatus ATCC 10500] gi|218720679|gb|EED20098.1| GTP binding protein, putative [Talaromyces stipitatus ATCC 10500] Length = 362 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 63 VASVGFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTTVPGQVMYNGAKIQILDLPGIIQ 122 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 123 GAKDGKGRGRQVIAVAKTCHLIFIVL 148 >gi|206580841|ref|YP_002240872.1| GTP-binding proten HflX [Klebsiella pneumoniae 342] gi|288937528|ref|YP_003441587.1| GTP-binding proten HflX [Klebsiella variicola At-22] gi|290512267|ref|ZP_06551634.1| GTP-binding protein HflX [Klebsiella sp. 1_1_55] gi|206569899|gb|ACI11675.1| GTP-binding proten HflX [Klebsiella pneumoniae 342] gi|288892237|gb|ADC60555.1| GTP-binding proten HflX [Klebsiella variicola At-22] gi|289775262|gb|EFD83263.1| GTP-binding protein HflX [Klebsiella sp. 1_1_55] Length = 426 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 13/173 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +T A+ A+ F TL P L + E +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNQITAAEVYAANQLFATLDPTLRRIDVPDVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKI 273 ++ H L+ T + +LLH++ A + VQ A +L E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIDAVNTVLAEIEAD-------- 308 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI L ++ +D + + + + S+ TG G+P + + L +++ Sbjct: 309 EIPALMVMNKIDMLDDFEPRIDRDDENKPIRVWLSAQTGVGVPLLFQALTERL 361 >gi|88704495|ref|ZP_01102209.1| GTP-binding protein HflX [Congregibacter litoralis KT71] gi|88701546|gb|EAQ98651.1| GTP-binding protein HflX [Congregibacter litoralis KT71] Length = 420 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 13/138 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 +A + ++G NAGKST ++T AK AD F TL P L ++ + ++AD G I Sbjct: 198 LATVALVGYTNAGKSTLFNTLTDAKVYAADQLFATLDPTLRRLEVDNLGPLVIADTVGFI 257 Query: 218 KNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENV---QAAYQCILDELSAYNS---E 268 A G+ + F L+ T +LLH+V A E+ + Q +L+E+ A E Sbjct: 258 --ARLPHGLVEAFKATLEETREADLLLHVVDAASEDRDDNRHEVQAVLEEIGAEERPVLE 315 Query: 269 LRKKIEIVGLS-QIDTVD 285 + KI+++ + +ID D Sbjct: 316 IYNKIDLLEMQPRIDRDD 333 >gi|219120303|ref|XP_002180893.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407609|gb|EEC47545.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 271 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 41/126 (32%) Query: 162 IGIIGLPNAGKSTFLASVTR-AKPK-----------IADYPFTTLYPNLGIV-------- 201 IG++G P+AGKSTF + T A+ + +A +PFTT+ PN G Sbjct: 2 IGLVGKPSAGKSTFFNAATAFARQRDDSETVLGGATMAPHPFTTIDPNNGFCLLPAPQDS 61 Query: 202 --KEGYK-------------------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 +E Y+ +L D+ G++ NA+QG G G++FL VL Sbjct: 62 CPEEDYEGDLTFGSTHGRNNHGRRLIPMLLRDVAGLVPNAYQGRGRGNKFLHDLTGADVL 121 Query: 241 LHIVSA 246 +H++ A Sbjct: 122 VHVLDA 127 >gi|134084490|emb|CAK43244.1| unnamed protein product [Aspergillus niger] Length = 398 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 64 VASVGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTTVPGQVMYNGAKIQILDLPGIIQ 123 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 124 GAKDGKGRGRQVIAVAKTCHLIFIVL 149 >gi|189188470|ref|XP_001930574.1| GTP-binding protein 128up [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972180|gb|EDU39679.1| GTP-binding protein 128up [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 371 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 64 VASVGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTTVPGQVMYNGAKIQILDLPGIIQ 123 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 124 GAKDGKGRGRQVIAVAKTCHLIFIVL 149 >gi|241949375|ref|XP_002417410.1| conserved hypothetical protein [Candida dubliniensis CD36] gi|223640748|emb|CAX45062.1| conserved hypothetical protein [Candida dubliniensis CD36] Length = 368 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 41/73 (56%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G +G P+ GKST L+ +T + A Y FTTL G +K + + D+PGII+ Sbjct: 64 VATVGFVGFPSVGKSTLLSKLTGTHSEAAAYEFTTLTTVPGTIKYKGAKIQMLDLPGIIE 123 Query: 219 NAHQGAGIGDRFL 231 A G G G + + Sbjct: 124 GAKDGKGRGRQVI 136 >gi|149244826|ref|XP_001526956.1| hypothetical protein LELG_01785 [Lodderomyces elongisporus NRRL YB-4239] gi|146449350|gb|EDK43606.1| hypothetical protein LELG_01785 [Lodderomyces elongisporus NRRL YB-4239] Length = 396 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 22/107 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTLYPNLGIV----------KEGYKE-- 207 GI+GL N GKSTF ++TR P A+YPF T+ P V E YK Sbjct: 25 GIVGLANVGKSTFFQAITRCPLGNP--ANYPFATIEPEEARVIVPSERFDKLCELYKPKS 82 Query: 208 -----FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+ K AH G G+G+ FL + + + A ++ Sbjct: 83 EVPAFLTVYDIAGLTKGAHSGEGLGNNFLANIRAVDSIFQMTRAFDD 129 >gi|152978660|ref|YP_001344289.1| small GTP-binding protein [Actinobacillus succinogenes 130Z] gi|150840383|gb|ABR74354.1| small GTP-binding protein [Actinobacillus succinogenes 130Z] Length = 439 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 7/114 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +T+A AD F TL P L + + ILAD G I Sbjct: 206 IPTVSLVGYTNAGKSTLFNRLTQADVYAADQLFATLDPTLRRLSVQDVGTAILADTVGFI 265 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSAL----EENVQAAYQCILDELSAYN 266 ++ H L+ T +LLH++ A +EN+ AA +L+E+ A N Sbjct: 266 RDLPHDLVSAFKSTLQETTEASLLLHVIDAADMRKQENI-AAVNAVLNEIQADN 318 >gi|119776156|ref|YP_928896.1| GTP-binding protein HflX [Shewanella amazonensis SB2B] gi|119768656|gb|ABM01227.1| GTP-binding protein HflX [Shewanella amazonensis SB2B] Length = 435 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 4/110 (3%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A + ++G NAGKST ++T A+ AD F TL P L ++ ILAD G I+ Sbjct: 197 MAAVSLVGYTNAGKSTLFNTLTSAEVYAADQLFATLDPTLRKLELPDGAAILADTVGFIR 256 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSA 264 + H L+ T +LLH++ +E ++ Q +L E+ A Sbjct: 257 HLPHDLVAAFKATLQETREADLLLHVIDCADEKMRDNIEQVQAVLKEIDA 306 >gi|68484921|ref|XP_713599.1| hypothetical protein CaO19.8374 [Candida albicans SC5314] gi|68484996|ref|XP_713564.1| hypothetical protein CaO19.754 [Candida albicans SC5314] gi|46435069|gb|EAK94459.1| hypothetical protein CaO19.754 [Candida albicans SC5314] gi|46435105|gb|EAK94494.1| hypothetical protein CaO19.8374 [Candida albicans SC5314] Length = 396 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 22/107 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTL----------YPNLGIVKEGYKE-- 207 GI+GL N GKSTF ++TR P A+YPF T+ P + E YK Sbjct: 25 GIVGLANVGKSTFFQAITRCPLGNP--ANYPFATIDPEEARVIVPSPRFDKLCELYKPKS 82 Query: 208 -----FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+ K AH G G+G+ FL + + +V ++ Sbjct: 83 EVPAFLTVYDIAGLTKGAHAGEGLGNNFLANIRAVDSIFQMVRCFDD 129 >gi|242785133|ref|XP_002480531.1| GTP binding protein, putative [Talaromyces stipitatus ATCC 10500] gi|218720678|gb|EED20097.1| GTP binding protein, putative [Talaromyces stipitatus ATCC 10500] Length = 367 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 63 VASVGFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTTVPGQVMYNGAKIQILDLPGIIQ 122 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 123 GAKDGKGRGRQVIAVAKTCHLIFIVL 148 >gi|68476655|ref|XP_717620.1| hypothetical protein CaO19.5083 [Candida albicans SC5314] gi|68476802|ref|XP_717546.1| hypothetical protein CaO19.12549 [Candida albicans SC5314] gi|46439261|gb|EAK98581.1| hypothetical protein CaO19.12549 [Candida albicans SC5314] gi|46439338|gb|EAK98657.1| hypothetical protein CaO19.5083 [Candida albicans SC5314] gi|238878764|gb|EEQ42402.1| GTP-binding protein 128up [Candida albicans WO-1] Length = 368 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 41/73 (56%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G +G P+ GKST L+ +T + A Y FTTL G +K + + D+PGII+ Sbjct: 64 VATVGFVGFPSVGKSTLLSKLTGTHSEAAAYEFTTLTTVPGTIKYKGAKIQMLDLPGIIE 123 Query: 219 NAHQGAGIGDRFL 231 A G G G + + Sbjct: 124 GAKDGKGRGRQVI 136 >gi|304396954|ref|ZP_07378834.1| GTP-binding proten HflX [Pantoea sp. aB] gi|304355750|gb|EFM20117.1| GTP-binding proten HflX [Pantoea sp. aB] Length = 426 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST ++T A AD F TL P L + + +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNAMTSANVFAADQLFATLDPTLRRLNVADVGDVVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +L+H++ + EN+ AA +L+E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLMHVIDGADLRVTENI-AAVDAVLEEIEADEIP---- 311 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D +NE + + S+ TG GIP + + L +++ Sbjct: 312 -TLLVMNKIDMLDGFEPRIDRNE---ENLPIRVWLSAQTGVGIPLLWQALSERL 361 >gi|282162715|ref|YP_003355100.1| GTP-binding protein [Methanocella paludicola SANAE] gi|282155029|dbj|BAI60117.1| GTP-binding protein [Methanocella paludicola SANAE] Length = 338 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 18/99 (18%) Query: 155 KLKLIADIG------IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF 208 KLK + D+ + G PN GKS+F++ +T A+P+IA YPFTT +G K + Sbjct: 148 KLKDLPDVKEEPTIVVAGYPNVGKSSFVSDITGARPEIAQYPFTTKSVTIGHFTFKRKRY 207 Query: 209 ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 + D PG++ DR L+ ER + +SAL Sbjct: 208 QVIDTPGLL----------DRPLE--ERNDIERQAISAL 234 >gi|294139257|ref|YP_003555235.1| GTP-binding protein HflX [Shewanella violacea DSS12] gi|293325726|dbj|BAJ00457.1| GTP-binding protein HflX [Shewanella violacea DSS12] Length = 432 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 4/107 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + ++G NAGKST S+T + AD F TL P L + ILAD G I++ Sbjct: 200 VSLVGYTNAGKSTLFNSLTVSDVYAADQLFATLDPTLRKLDLPDGAIILADTVGFIRHLP 259 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY---QCILDELSA 264 H L+ T +LLHIV ++N++ + Q +L E+ A Sbjct: 260 HDLVAAFKSTLQETREADLLLHIVDCHDDNMEDNFEQVQLVLKEIGA 306 >gi|225556730|gb|EEH05018.1| developmentally regulated GTP-binding protein [Ajellomyces capsulatus G186AR] gi|240281587|gb|EER45090.1| GTP binding protein [Ajellomyces capsulatus H143] gi|325087737|gb|EGC41047.1| GTP binding protein [Ajellomyces capsulatus H88] Length = 367 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 2/87 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGII 217 +A +G IG P+ GKST ++ +T + A Y FTTL G ++ G K IL D+PGII Sbjct: 63 VASVGFIGFPSVGKSTLMSKITGQHSEAAAYEFTTLTTVPGQVIYNGAKIQIL-DLPGII 121 Query: 218 KNAHQGAGIGDRFLKHTERTHVLLHIV 244 + A G G G + + + H++ ++ Sbjct: 122 QGAKDGKGRGRQVIAVAKTCHLIFIVL 148 >gi|220916946|ref|YP_002492250.1| TGS domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219954800|gb|ACL65184.1| TGS domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 330 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 36/53 (67%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +IG N+GKS+ LA++T AKP+IA+YPFTT P G+++ + L D P + Sbjct: 85 MIGPANSGKSSLLAALTHAKPEIAEYPFTTRDPLPGMMEFEDVQVQLVDTPAV 137 >gi|71414858|ref|XP_809515.1| GTP-binding protein [Trypanosoma cruzi strain CL Brener] gi|70873911|gb|EAN87664.1| GTP-binding protein, putative [Trypanosoma cruzi] Length = 374 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 4/111 (3%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 ++G P+ GKS+FL+ VT + A Y FTTL G + E + D+PGII+ A + Sbjct: 68 ALVGFPSVGKSSFLSRVTATVSEAAGYEFTTLTCIPGKLMHKGTEIQILDLPGIIEGAAE 127 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-ELSAYNSELRKK 272 G G G + + T RT + I+ L+ A +C L+ EL L +K Sbjct: 128 GKGRGRQVIA-TARTSDM--IILMLDAAKAEAQRCKLEAELETVGIRLNQK 175 >gi|120597493|ref|YP_962067.1| GTP-binding protein, HSR1-related [Shewanella sp. W3-18-1] gi|146294366|ref|YP_001184790.1| GTP-binding protein, HSR1-related [Shewanella putrefaciens CN-32] gi|120557586|gb|ABM23513.1| GTP-binding protein, HSR1-related [Shewanella sp. W3-18-1] gi|145566056|gb|ABP76991.1| GTP-binding protein, HSR1-related [Shewanella putrefaciens CN-32] Length = 435 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 4/107 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + ++G NAGKST ++T + AD F TL P L + ILAD G I++ Sbjct: 200 VSLVGYTNAGKSTLFNALTSSDVYAADQLFATLDPTLRKLDLPDGAVILADTVGFIRHLP 259 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY---QCILDELSA 264 H L+ T + +LLHIV +EN+ + Q +L ++ A Sbjct: 260 HDLVAAFKATLQETRQAELLLHIVDCADENMADNFEQVQSVLKDIEA 306 >gi|67624197|ref|XP_668381.1| GTP-binding protein [Cryptosporidium hominis TU502] gi|54659594|gb|EAL38164.1| GTP-binding protein [Cryptosporidium hominis] Length = 397 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 26/154 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYK------------ 206 +G++GLPN GKST + + ++PF T+ P+ + + + ++ Sbjct: 24 MGLVGLPNVGKSTTFNLLCKQAVPAENFPFCTIEPHEARMNVPDDRFRALCKHFSPKSEV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILD 260 + DI G++ AH+G G+G+ FL + + + H+V A E + + + D Sbjct: 84 PATLTIFDIAGLVPGAHKGEGLGNAFLSNIQAVDGIYHVVRAFESDEIVHTEGEVNPVKD 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 L ++ELR K L ++D + S+ KN Sbjct: 144 -LETISNELRMK----DLERVDKLISELNRLTKN 172 >gi|317049755|ref|YP_004117403.1| GTP-binding proten HflX [Pantoea sp. At-9b] gi|316951372|gb|ADU70847.1| GTP-binding proten HflX [Pantoea sp. At-9b] Length = 426 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 7/170 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST ++T A AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNAITSADVYAADQLFATLDPTLRRLNVADVGEVVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ H L+ T + +L+H++ A + V + + + L+ ++ + I Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLMHVIDAADLRVNDNIEAVNEVLAEIEADEIPTLLI- 315 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ID +D ++E + + S+ TG G+P + + L +++ Sbjct: 316 -MNKIDMLDGFVPRIDRDE---ENKPIRVWLSAQTGVGLPLLWQALSERL 361 >gi|66362270|ref|XP_628099.1| yyaF/YCHF TRANSFAC/OBG family small GTpase plus RNA binding domain TGS [Cryptosporidium parvum Iowa II] gi|46227626|gb|EAK88561.1| yyaF/YCHF TRANSFAC/OBG family small GTpase plus RNA binding domain TGS [Cryptosporidium parvum Iowa II] Length = 398 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 26/154 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYK------------ 206 +G++GLPN GKST + + ++PF T+ P+ + + + ++ Sbjct: 25 MGLVGLPNVGKSTTFNLLCKQAVPAENFPFCTIEPHEARMNVPDDRFRALCKHFSPKSEV 84 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILD 260 + DI G++ AH+G G+G+ FL + + + H+V A E + + + D Sbjct: 85 PATLTIFDIAGLVPGAHKGEGLGNAFLSNIQAVDGIYHVVRAFESDEIVHTEGEVNPVKD 144 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN 294 L ++ELR K L ++D + S+ KN Sbjct: 145 -LETISNELRMK----DLERVDKLISELNRLTKN 173 >gi|23011756|ref|ZP_00052024.1| COG2262: GTPases [Magnetospirillum magnetotacticum MS-1] Length = 376 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 10/177 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNA 220 + ++G NAGKST ++T+A+ K D F TL P K + E IL+D G I + Sbjct: 136 VALVGYTNAGKSTLFNALTKAEVKAQDMLFATLDPTARATKLPHGETVILSDTVGFISDL 195 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIV 276 R L+ +LLH+ + QA + +L EL ++ + IE+ Sbjct: 196 PTSLIAAFRATLEDVIEADILLHVRDVSHGDTQAQAEDVEAVLREL-GIKADADRIIEV- 253 Query: 277 GLSQIDTVDSDTLARKKNELATQ--CGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 ++ D +D R N A G P S++TG G+P + E + ++ R Sbjct: 254 -WNKADLLDEGERTRLLNLSAAHRGTGPAPILVSALTGEGLPALAERIESQVARARS 309 >gi|212527928|ref|XP_002144121.1| GTP binding protein, putative [Penicillium marneffei ATCC 18224] gi|210073519|gb|EEA27606.1| GTP binding protein, putative [Penicillium marneffei ATCC 18224] Length = 353 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 49 VASVGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTTVPGQVMYNGAKIQILDLPGIIQ 108 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 109 GAKDGKGRGRQVIAVAKTCHLIFIVL 134 >gi|330752120|emb|CBL87081.1| GTP-binding protein era homolog [uncultured Flavobacteria bacterium] Length = 301 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 20/173 (11%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + A V I TT + LGI+ + +L+D PG+IK Sbjct: 16 VTIVGNPNVGKSTLMNAWVGERLSIITSKAQTTRHRILGIINGDDYQMVLSDTPGVIKPI 75 Query: 221 HQGAGIGDRFLK-HTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR-KKIEIVGL 278 ++ F+K E +L+++V E+ ++ A A+ +++ KI ++ L Sbjct: 76 YEMQSSMMAFVKGALEDADILIYMVEIGEKEMKDA---------AFFEKIKGSKIPLLLL 126 Query: 279 -SQIDTVDSDTLARKKNELATQCGQVP----FEFSSITGHGIPQILECLHDKI 326 ++IDT D +TL +A +P F S+ITG + ++L+ + DK+ Sbjct: 127 INKIDTADQETLM---TTIAFWKEMLPMAEVFPISAITGFSVKEVLDYIIDKL 176 >gi|217967705|ref|YP_002353211.1| GTP-binding protein Era [Dictyoglomus turgidum DSM 6724] gi|217336804|gb|ACK42597.1| GTP-binding protein Era [Dictyoglomus turgidum DSM 6724] Length = 298 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 20/184 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 +A I I+G PNAGKST + + K I AD P TT LG++ +FI D PG Sbjct: 7 LAYISIVGKPNAGKSTLINLLVGEKVSIVADKPQTTRQRILGVLTLEDAQFIFLDTPGWF 66 Query: 218 KNAHQGAGIGDRFLKHT-ERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKKI 273 H + +K T E + ++L+++ + L+++ + + + D+ Y Sbjct: 67 PPKHLLGEYMQKTIKKTIEDSDIVLYVIDSSVELDDDNRTLLKFVKDQGKPY-------- 118 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQ--CGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 +V L++ID V S ++ +K E+ + E S++ G E L +K+ I Sbjct: 119 -LVLLNKIDMVSSKSIEERKKEVIALGVSEEKIIEISALYGTN----KELLIEKLKEIAP 173 Query: 332 ENEF 335 E EF Sbjct: 174 EGEF 177 >gi|171692067|ref|XP_001910958.1| hypothetical protein [Podospora anserina S mat+] gi|170945982|emb|CAP72783.1| unnamed protein product [Podospora anserina S mat+] Length = 423 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 28/111 (25%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P+AGKS+ L S+T A K+ FTT+ PN Sbjct: 7 IGLVGKPSAGKSSTLNSLTDASSKVGG--FTTIDPQRAIGYLQIDCACTRYNLTDKCKPN 64 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 G G + L D+ G++ AH+G G+G++FL L+H+V A Sbjct: 65 YGSCDNGRRSVPIELLDVAGLVPGAHEGKGLGNKFLDDLRHADALIHVVDA 115 >gi|164661039|ref|XP_001731642.1| hypothetical protein MGL_0910 [Malassezia globosa CBS 7966] gi|159105543|gb|EDP44428.1| hypothetical protein MGL_0910 [Malassezia globosa CBS 7966] Length = 354 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 2/114 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 IA +G +G P+ GKST ++ +T + A Y FTTL G + + D+PGII+ Sbjct: 50 IASVGFVGFPSVGKSTLMSGLTGTTSEAAAYEFTTLTTVPGTMTVRGARIQILDLPGIIE 109 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G R + RT L+ IV + + ++ Q + EL + L KK Sbjct: 110 GAKDGKGRG-RQVIAVARTCNLIFIVLDVGKPLRDK-QILESELEGFGIRLNKK 161 >gi|156051136|ref|XP_001591529.1| hypothetical protein SS1G_06975 [Sclerotinia sclerotiorum 1980] gi|154704753|gb|EDO04492.1| hypothetical protein SS1G_06975 [Sclerotinia sclerotiorum 1980 UF-70] Length = 339 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 2/87 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGII 217 +A +G IG P+ GKST ++ +T + A Y FTTL G I+ G K IL D+PGII Sbjct: 63 VASVGFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTTVPGQILYNGAKIQIL-DLPGII 121 Query: 218 KNAHQGAGIGDRFLKHTERTHVLLHIV 244 + A G G G + + + H++ ++ Sbjct: 122 QGAKDGKGRGRQVIAVAKTCHLIFIVL 148 >gi|330926534|ref|XP_003301501.1| hypothetical protein PTT_13021 [Pyrenophora teres f. teres 0-1] gi|311323633|gb|EFQ90403.1| hypothetical protein PTT_13021 [Pyrenophora teres f. teres 0-1] Length = 368 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 64 VASVGFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTTVPGQVMYNGAKIQILDLPGIIQ 123 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 124 GAKDGKGRGRQVIAVAKTCHLIFIVL 149 >gi|126172808|ref|YP_001048957.1| GTP-binding protein, HSR1-related [Shewanella baltica OS155] gi|153002272|ref|YP_001367953.1| GTP-binding protein HSR1-like [Shewanella baltica OS185] gi|125996013|gb|ABN60088.1| GTP-binding protein, HSR1-related [Shewanella baltica OS155] gi|151366890|gb|ABS09890.1| GTP-binding protein HSR1-related [Shewanella baltica OS185] Length = 435 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 4/110 (3%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 ++ + ++G NAGKST ++T + AD F TL P L + ILAD G I+ Sbjct: 197 LSTVSLVGYTNAGKSTLFNALTSSDVYAADQLFATLDPTLRKLDLPDGAVILADTVGFIR 256 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY---QCILDELSA 264 + H L+ T + +LLHI+ +EN+ + Q +L ++ A Sbjct: 257 HLPHDLVAAFKATLQETRQAELLLHIIDCADENMADNFDQVQSVLKDIEA 306 >gi|225442162|ref|XP_002275840.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297743023|emb|CBI35890.3| unnamed protein product [Vitis vinifera] Length = 399 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 2/111 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L +T + A Y FTTL GI+ + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTLLTLLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIEGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 +G G G + + ++ + ++L ++ A + Q + EL A L KK Sbjct: 125 EGKGRGRQVIAVSKSSDIVLMVLDA--SKSEGHRQILTKELEAVGLRLNKK 173 >gi|322819242|gb|EFZ26423.1| GTP-binding protein, putative [Trypanosoma cruzi] Length = 374 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 4/111 (3%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 ++G P+ GKS+FL+ VT + A Y FTTL G + E + D+PGII+ A + Sbjct: 68 ALVGFPSVGKSSFLSRVTATVSEAAGYEFTTLTCIPGKLMHKGTEIQILDLPGIIEGAAE 127 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-ELSAYNSELRKK 272 G G G + + T RT + I+ L+ A +C L+ EL L +K Sbjct: 128 GKGRGRQVIA-TARTSDM--IILMLDAAKAEAQRCKLEAELETVGIRLNQK 175 >gi|332375062|gb|AEE62672.1| unknown [Dendroctonus ponderosae] Length = 367 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 64 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + ++ + L+ V + I EL + L K+ Sbjct: 124 AKDGKGRGRQVIAVARTCSLIFLCLDVLKPLVHK--KLIEHELEGFGLRLNKQ 174 >gi|330834174|ref|YP_004408902.1| small GTP-binding protein [Metallosphaera cuprina Ar-4] gi|329566313|gb|AEB94418.1| small GTP-binding protein [Metallosphaera cuprina Ar-4] Length = 331 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 18/150 (12%) Query: 166 GLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAG 225 G PN GKST +++++ AKP++A YPFTT ++G + G K ++ D PGI+ Sbjct: 164 GPPNVGKSTLVSAISSAKPEVASYPFTTKEIHVGHMDCGIKVQVI-DTPGILDRPDYKRN 222 Query: 226 IGDR----FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN--SELRKKIEIVGLS 279 + +R LK+ + + L VS ++A ++L +N L K I +V + Sbjct: 223 VIERRAVNALKNLQGLIIFLFDVS------KSANYDPEEQLKIFNDVKTLGKPI-VVVFN 275 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSS 309 +ID VD++ + E+ ++ P E SS Sbjct: 276 KIDDVDNEI----RGEIISKINDRPLEISS 301 >gi|298243292|ref|ZP_06967099.1| GTP-binding proten HflX [Ktedonobacter racemifer DSM 44963] gi|297556346|gb|EFH90210.1| GTP-binding proten HflX [Ktedonobacter racemifer DSM 44963] Length = 451 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + ++G NAGKST L ++ A+ D F TL P + EG +EF+L D G ++ Sbjct: 218 VALVGYTNAGKSTLLNRLSGAQKLAEDKLFATLDPTTRRARIEGGQEFLLTDTVGFVQRL 277 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKIEIV 276 H L+ +L+H+V + +V A + +L+E+ A + ++ Sbjct: 278 PHTLVAAFRATLEEVNAADLLVHVVDSSHPHVNHQILAVEEVLEEIGAGGMPI-----VI 332 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 L++ D ++ T +A QV + S++ G GI +L C+ + S Sbjct: 333 ALNKSDNLEPGTTLPPLEGIAATLPQV--QVSALKGTGISDLLRCISQALVS 382 >gi|159486891|ref|XP_001701470.1| predicted protein [Chlamydomonas reinhardtii] gi|158271652|gb|EDO97467.1| predicted protein [Chlamydomonas reinhardtii] Length = 403 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 14/169 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I +GI G NAGKST L ++T A D F TL P V+ +G KE +L+D G I Sbjct: 205 IPVVGICGYTNAGKSTLLNTITGAGVLAEDQLFATLDPTTRRVRLKGNKEILLSDTVGFI 264 Query: 218 KNAHQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + R L+ + ++LH+V N A + ++ L+ + I IV Sbjct: 265 QKLPTELVAAFRATLEEIQDASIILHVVDISHPNAAAQNEAVMQVLTELGVD---HIPIV 321 Query: 277 -GLSQIDTVDSDTLARK--KNELATQCGQVPFEFSSITGHGIPQILECL 322 ++ID + R+ T C S +TG G+ Q++E L Sbjct: 322 TAWNKIDACSNPDEVRRIAAKRTRTVC------ISGMTGEGLEQLMEVL 364 >gi|310793070|gb|EFQ28531.1| TGS domain-containing protein [Glomerella graminicola M1.001] Length = 353 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 45/86 (52%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A IG IG P+ GKST ++ +T + A Y FTTL G V + D+PGII+ Sbjct: 49 VASIGFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTSVPGQVTYNGAPLQIIDLPGIIE 108 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 109 GAKDGRGRGRQVIAVAKTCHLIFIVL 134 >gi|121702687|ref|XP_001269608.1| GTP binding protein, putative [Aspergillus clavatus NRRL 1] gi|119397751|gb|EAW08182.1| GTP binding protein, putative [Aspergillus clavatus NRRL 1] Length = 369 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 63 VASVGFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTTVPGQVMYNGAKIQILDLPGIIQ 122 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 123 GAKDGKGRGRQVIAVAKTCHLIFIVL 148 >gi|326521804|dbj|BAK00478.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 647 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 16/179 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL VTRA + Y FTT +G Y + + D PGI+ + Sbjct: 173 ICGYPNVGKSSFLNKVTRAHVDVQPYAFTTKSLFVGHTDYQYLPWQVIDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + +R + L H+ +A+ V + QC I +++ ++S K +V Sbjct: 230 --LEERNTIEMQSITALAHLRAAIIYIVDISEQCGYNIKQQVALFHSIKALFTNKPVLVV 287 Query: 278 LSQIDTVDSDTLARKKNE----LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 L++ D + LA ++ + LAT ++ S++T G+ Q+ +K+ + R E Sbjct: 288 LNKTDVTKVEDLAEEEKKLIQGLATDGAEL-ITMSTLTEDGVSQVKTTACEKLLAQRVE 345 >gi|317153711|ref|YP_004121759.1| ferrous iron transport protein B [Desulfovibrio aespoeensis Aspo-2] gi|316943962|gb|ADU63013.1| ferrous iron transport protein B [Desulfovibrio aespoeensis Aspo-2] Length = 728 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 13/163 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 +GI G PN GK+T ++T A+ +A++P T+ +GI+K G L D+PG A Sbjct: 6 LGIAGNPNCGKTTMFNALTGARQHVANWPGVTVEKKVGIIKAGEDTIELVDLPGTYSLTA 65 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVS--ALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ER V++ +++ ALE N+ A Q + EL + ++GL Sbjct: 66 YTQEELVARNFLVEERPQVVIDVMNADALERNLYLAVQIM---------ELGVPL-VLGL 115 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 + +D V +LA G E + +G G ++L Sbjct: 116 NMMDEVRKSGKDIDSEKLAALSGCKVVETVARSGKGADELLRT 158 >gi|238879048|gb|EEQ42686.1| hypothetical protein CAWG_00907 [Candida albicans WO-1] Length = 396 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTL----------YPNLGIVKEGYKE---- 207 GI+GL N GKSTF ++TR A+YPF T+ P + E YK Sbjct: 25 GIVGLANVGKSTFFQAITRCPLGNPANYPFATIDPEEARVIVPSPRFDKLCELYKPKSEV 84 Query: 208 ---FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+ K AH G G+G+ FL + + +V ++ Sbjct: 85 PAFLTVYDIAGLTKGAHAGEGLGNNFLANIRAVDSIFQMVRCFDD 129 >gi|154295193|ref|XP_001548033.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10] gi|150844137|gb|EDN19330.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10] Length = 385 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 4/114 (3%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGII 217 +A +G IG P+ GKST ++ +T + A Y FTTL G I+ G K IL D+PGII Sbjct: 56 VASVGFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTTVPGQILYNGAKIQIL-DLPGII 114 Query: 218 KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 + A G G G + + + H L+ IV + + + + I DEL + + K Sbjct: 115 QGAKDGKGRGRQVIAVAKTCH-LIFIVLDVNKPLTDK-KIIEDELEGFGIRINK 166 >gi|309811288|ref|ZP_07705077.1| GTP-binding protein HflX [Dermacoccus sp. Ellin185] gi|308434770|gb|EFP58613.1| GTP-binding protein HflX [Dermacoccus sp. Ellin185] Length = 508 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 79/170 (46%), Gaps = 9/170 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I G NAGKS+ L +T A + + F TL P + + + + LAD G + Sbjct: 287 VPSVAIAGYTNAGKSSILNRLTNAGVLVQNQLFATLDPTVRRAETADGRAYTLADTVGFV 346 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ HQ L+ +LLH+V + ++ + + L+ ++ K EI+ Sbjct: 347 RDLPHQLVEAFRSTLEEVADADLLLHVVDGSHPDPESQISAVREVLADVDASDVK--EII 404 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ D D D + R + + S+ TG G+P++L+ + D++ Sbjct: 405 VINKADVADPDVIDR-----LMRHEKYAIAVSARTGAGLPELLQLIADEL 449 >gi|212527926|ref|XP_002144120.1| GTP binding protein, putative [Penicillium marneffei ATCC 18224] gi|210073518|gb|EEA27605.1| GTP binding protein, putative [Penicillium marneffei ATCC 18224] Length = 367 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 63 VASVGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTTVPGQVMYNGAKIQILDLPGIIQ 122 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 123 GAKDGKGRGRQVIAVAKTCHLIFIVL 148 >gi|71745170|ref|XP_827215.1| developmentally regulated GTP-binding protein [Trypanosoma brucei] gi|70831380|gb|EAN76885.1| developmentally regulated GTP-binding protein, putative [Trypanosoma brucei] Length = 374 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 46/90 (51%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 ++G P+ GKS+FL+ VT + A Y FTTL G + E + D+PGII+ A + Sbjct: 68 ALVGFPSVGKSSFLSRVTTTESTAAGYEFTTLTCIPGKLMHRGTEIQILDLPGIIEGAAE 127 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 G G G + + +++ ++ A Q Sbjct: 128 GKGRGRQVIATARTADMIILMLDAARAEAQ 157 >gi|164429058|ref|XP_957275.2| developmentally regulated GTP-binding protein 1 [Neurospora crassa OR74A] gi|157072392|gb|EAA28039.2| developmentally regulated GTP-binding protein 1 [Neurospora crassa OR74A] Length = 360 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 45/86 (52%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A IG IG P+ GKST ++ +T + A Y FTTL G V + D+PGII+ Sbjct: 50 VASIGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTSVPGQVTYNGAPLQIIDLPGIIE 109 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 110 GAKDGRGRGRQVIAVAKTCHLIFIVL 135 >gi|56459445|ref|YP_154726.1| GTPase, HflX [Idiomarina loihiensis L2TR] gi|56178455|gb|AAV81177.1| GTPase, HflX [Idiomarina loihiensis L2TR] Length = 428 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 13/170 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I + ++G NAGKST +T A AD F TL P L + E E ILAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNRLTEAGVYAADQLFATLDPTLRKLAVEDIGEVILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNSELRKKI 273 ++ H L+ T+ +LLH+V +E Q +L+E+ A + Sbjct: 257 RHLPHDLVAAFKATLQETQEADLLLHVVDVSDEQQQNNIDQVAEVLEEIDAGDVP----- 311 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 +++ ++ID V+ A + + + S+ G GI ++LE L Sbjct: 312 QLIICNKIDQVEG---AEPRIDYDDNQKPIRVWVSAQQGLGIEEVLEALR 358 >gi|330003345|ref|ZP_08304588.1| GTP-binding protein HflX [Klebsiella sp. MS 92-3] gi|328537007|gb|EGF63297.1| GTP-binding protein HflX [Klebsiella sp. MS 92-3] Length = 426 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 13/173 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +T A+ A+ F TL P L + E +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNQITAAEVYAANQLFATLDPTLRRIDVPDVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKI 273 ++ H L+ T + +LLH++ A + VQ A +L E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIDAVNTVLAEIEAD-------- 308 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI L ++ +D + + + + S+ TG G+P + + L +++ Sbjct: 309 EIPALLVMNKIDMLDDFEPRIDRDDENKPIRVWLSAQTGVGVPLLFQALTERL 361 >gi|198457694|ref|XP_002138435.1| GA24766 [Drosophila pseudoobscura pseudoobscura] gi|198136071|gb|EDY68993.1| GA24766 [Drosophila pseudoobscura pseudoobscura] Length = 150 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 40/72 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D PGII+ Sbjct: 65 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDFPGIIEG 124 Query: 220 AHQGAGIGDRFL 231 A G G G + + Sbjct: 125 AKDGKGRGRQVI 136 >gi|325089738|gb|EGC43048.1| GTP-binding protein [Ajellomyces capsulatus H88] Length = 394 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVK----------EGYK----- 206 GI+GL N GKST ++TR A++PF T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITRCSLGNPANFPFATIDPEEARVVVPDARYDWLCEHYKPKSRV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPVRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L+ + ELR K IE V Sbjct: 144 -LNIISEELRIKDIEFV 159 >gi|189207707|ref|XP_001940187.1| GTP-binding protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187976280|gb|EDU42906.1| GTP-binding protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 405 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 14/97 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA------DYPFTTL------YPNLGIVKEGYKEFI 209 IG++G P++GKST L T P+ A P L PN G EG + Sbjct: 7 IGLVGKPSSGKSTTLNRFTTIDPQRAIGYLQITCPCARLNLADRCKPNYGSCVEGRRSVP 66 Query: 210 --LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 L D+ G++ AH G G+G+RFL L+H+V Sbjct: 67 IELLDVAGLVPGAHMGKGLGNRFLDDLRHADALVHVV 103 >gi|152973043|ref|YP_001338189.1| putative GTPase HflX [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238892657|ref|YP_002917391.1| putative GTPase HflX [Klebsiella pneumoniae NTUH-K2044] gi|150957892|gb|ABR79922.1| GTP - binding subunit of protease specific for phage lambda cII repressor [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238544973|dbj|BAH61324.1| GTP - binding subunit of protease specific for phage lambda cII repressor [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 426 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 13/173 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +T A+ A+ F TL P L + E +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNQITAAEVYAANQLFATLDPTLRRIDVPDVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKI 273 ++ H L+ T + +LLH++ A + VQ A +L E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIDAVNTVLAEIEAD-------- 308 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI L ++ +D + + + + S+ TG G+P + + L +++ Sbjct: 309 EIPALLVMNKIDMLDDFEPRIDRDDENKPIRVWLSAQTGVGVPLLFQALTERL 361 >gi|261331430|emb|CBH14424.1| developmentally regulated GTP-binding protein,putative [Trypanosoma brucei gambiense DAL972] Length = 374 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 46/90 (51%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 ++G P+ GKS+FL+ VT + A Y FTTL G + E + D+PGII+ A + Sbjct: 68 ALVGFPSVGKSSFLSRVTTTESTAAGYEFTTLTCIPGKLMHRGTEIQILDLPGIIEGAAE 127 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 G G G + + +++ ++ A Q Sbjct: 128 GKGRGRQVIATARTADMIILMLDAARAEAQ 157 >gi|225559730|gb|EEH08012.1| GTP-binding protein YchF [Ajellomyces capsulatus G186AR] Length = 394 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVK----------EGYK----- 206 GI+GL N GKST ++TR A++PF T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITRCSLGNPANFPFATIDPEEARVVVPDARYDWLCEHYKPKSRV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPVRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L+ + ELR K IE V Sbjct: 144 -LNIISEELRIKDIEFV 159 >gi|159130777|gb|EDP55890.1| GTP binding protein, putative [Aspergillus fumigatus A1163] Length = 387 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 84 VASVGFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTTVPGQVLYNGAKIQILDLPGIIQ 143 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 144 GAKDGKGRGRQVIAVAKTCHLIFIVL 169 >gi|154287210|ref|XP_001544400.1| hypothetical protein HCAG_01447 [Ajellomyces capsulatus NAm1] gi|150408041|gb|EDN03582.1| hypothetical protein HCAG_01447 [Ajellomyces capsulatus NAm1] Length = 394 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVK----------EGYK----- 206 GI+GL N GKST ++TR A++PF T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITRCSLGNPANFPFATIDPEEARVVVPDARYDWLCEHYKPKSRV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPVRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L+ + ELR K IE V Sbjct: 144 -LNIISEELRIKDIEFV 159 >gi|149234922|ref|XP_001523340.1| hypothetical protein LELG_05566 [Lodderomyces elongisporus NRRL YB-4239] gi|146453129|gb|EDK47385.1| hypothetical protein LELG_05566 [Lodderomyces elongisporus NRRL YB-4239] Length = 410 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 18/100 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------KEG 204 G++GL N GKSTF ++T++ A+YP+ T+ P IV K Sbjct: 39 GLVGLANVGKSTFFQALTKSTLGNPANYPYATIEPEKSIVLVPLEKLDHYLKLYQLSKTV 98 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + DI G+ +N+ GAG+G++FL + +L +V Sbjct: 99 PTNLTIWDIAGLTRNSSTGAGLGNKFLSDIRQVDGVLQVV 138 >gi|70990912|ref|XP_750305.1| GTP binding protein [Aspergillus fumigatus Af293] gi|66847937|gb|EAL88267.1| GTP binding protein, putative [Aspergillus fumigatus Af293] Length = 388 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 85 VASVGFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTTVPGQVLYNGAKIQILDLPGIIQ 144 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 145 GAKDGKGRGRQVIAVAKTCHLIFIVL 170 >gi|326470850|gb|EGD94859.1| GTP binding protein [Trichophyton tonsurans CBS 112818] Length = 353 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 49 VASVGFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTTVPGQVLYNGAKIQMLDLPGIIQ 108 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 109 GAKDGKGRGRQVIAVAKTCHLIFIVL 134 >gi|262045395|ref|ZP_06018419.1| GTP-binding protein HflX [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037313|gb|EEW38560.1| GTP-binding protein HflX [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 426 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 13/173 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +T A+ A+ F TL P L + E +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNQITAAEVYAANQLFATLDPTLRRIDVPDVGETVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKI 273 ++ H L+ T + +LLH++ A + VQ A +L E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIDAVNTVLAEIEAD-------- 308 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI L ++ +D + + + + S+ TG G+P + + L +++ Sbjct: 309 EIPALLVMNKIDMLDDFEPRIDRDDENKPIRVWLSAQTGVGVPLLFQALTERL 361 >gi|153003068|ref|YP_001377393.1| TGS domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152026641|gb|ABS24409.1| TGS domain protein [Anaeromyxobacter sp. Fw109-5] Length = 329 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 7/101 (6%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 ++G PNAGKS+ LA++T A P+I +YPFTT P G+ + L D P + Sbjct: 85 LVGPPNAGKSSLLAALTHAHPEIGEYPFTTRAPLPGMAAVEDVQVQLVDTPPV------A 138 Query: 224 AGIGDRFLKH-TERTHVLLHIVSALEENVQAAYQCILDELS 263 AG + +L + + ++ ++ ++V A+ +L+ LS Sbjct: 139 AGHTEPYLPNLVQGADGVIVVLDPTADDVAQAFAAVLEVLS 179 >gi|327307544|ref|XP_003238463.1| developmentally regulated GTP-binding protein [Trichophyton rubrum CBS 118892] gi|326458719|gb|EGD84172.1| developmentally regulated GTP-binding protein [Trichophyton rubrum CBS 118892] Length = 367 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 63 VASVGFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTTVPGQVLYNGAKIQMLDLPGIIQ 122 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 123 GAKDGKGRGRQVIAVAKTCHLIFIVL 148 >gi|315055223|ref|XP_003176986.1| GTP-binding protein RBG1 [Arthroderma gypseum CBS 118893] gi|311338832|gb|EFQ98034.1| GTP-binding protein RBG1 [Arthroderma gypseum CBS 118893] Length = 353 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 49 VASVGFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTTVPGQVLYNGAKIQMLDLPGIIQ 108 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 109 GAKDGKGRGRQVIAVAKTCHLIFIVL 134 >gi|254573050|ref|XP_002493634.1| P-loop ATPase with similarity to human OLA1 and bacterial YchF [Pichia pastoris GS115] gi|238033433|emb|CAY71455.1| P-loop ATPase with similarity to human OLA1 and bacterial YchF [Pichia pastoris GS115] gi|328354538|emb|CCA40935.1| GTP-dependent nucleic acid-binding protein engD [Pichia pastoris CBS 7435] Length = 394 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 22/107 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTLYPNLG--------------IVKEGY 205 GI+GL N GKSTF ++TR+ P A+YPF T+ P +VK Sbjct: 24 GIVGLANVGKSTFFQAITRSPLGNP--ANYPFATIDPEEARVIVPSPRLDKLTEVVKPKA 81 Query: 206 K--EFI-LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 K FI + DI G+ K A G G+G+ FL H + +V ++ Sbjct: 82 KIPAFITVYDIAGLTKGASAGEGLGNAFLSHIRAVDAVFQVVRCFDD 128 >gi|169617265|ref|XP_001802047.1| hypothetical protein SNOG_11810 [Phaeosphaeria nodorum SN15] gi|160703373|gb|EAT80854.2| hypothetical protein SNOG_11810 [Phaeosphaeria nodorum SN15] Length = 389 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 84 VASVGFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTTVPGQVMYNGAKIQILDLPGIIQ 143 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 144 GAKDGKGRGRQVIAVAKTCHLIFIVL 169 >gi|116207200|ref|XP_001229409.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] gi|88183490|gb|EAQ90958.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] Length = 349 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 45/86 (52%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + D+PGII+ Sbjct: 49 VASVGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTSVPGQVMYNGAPLQMIDLPGIIE 108 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 109 GAKDGRGRGRQVIAVAKTCHLIFIVL 134 >gi|254566109|ref|XP_002490165.1| Protein of unknown function, has weak similarity to E. coli GTP-binding protein gtp1 [Pichia pastoris GS115] gi|238029961|emb|CAY67884.1| Protein of unknown function, has weak similarity to E. coli GTP-binding protein gtp1 [Pichia pastoris GS115] gi|328350566|emb|CCA36966.1| Obg-like ATPase 1 [Pichia pastoris CBS 7435] Length = 396 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 22/136 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPN-----------------LGIVKEG 204 GI+GL N GKSTF ++T++K A+YPF T+ P G +K+ Sbjct: 27 GIVGLANVGKSTFFQAITKSKLGNPANYPFATISPEEARVEVTSPKLDHLQHLYGSLKKI 86 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+++ A +G G+G++FL + L +V + +V+ + D Sbjct: 87 PAYLKVVDIAGLVRGASRGEGLGNQFLGDIRQVDGLFQVVRGFRDSDVTHVEGNVDPVRD 146 Query: 261 ELSAYNSELRKKIEIV 276 + + L K +E V Sbjct: 147 LMVVEDELLLKDMEFV 162 >gi|170588971|ref|XP_001899247.1| Probable nucleolar GTP-binding protein 1. [Brugia malayi] gi|158593460|gb|EDP32055.1| Probable nucleolar GTP-binding protein 1., putative [Brugia malayi] Length = 950 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 14/181 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+ + +TRA ++ Y FTT +G + Y + + D PGI+ + Sbjct: 174 LCGFPNVGKSSLMNLLTRADVEVQPYAFTTKALYVGHLDYKYLRWQVIDTPGILDQS--- 230 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC--ILDELSAYNSELR----KKIEIVG 277 + +R + L H+ +A+ + + C ++E A +R K ++G Sbjct: 231 --LEERNTIEMQAITALAHLRAAILFIMDISETCDHTIEEQVALFESIRPLFVNKPVLIG 288 Query: 278 LSQIDTVDSDTLARKKNELATQC---GQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 L+++D V D L ++K E + FE S++T G+ + + + R E++ Sbjct: 289 LNKVDIVRRDELKQEKMEQLKRLEDDSTSMFELSTVTQKGVMDFRNTACNHLLTQRVESK 348 Query: 335 F 335 Sbjct: 349 L 349 >gi|85058316|ref|YP_454018.1| putative GTPase HflX [Sodalis glossinidius str. 'morsitans'] gi|84778836|dbj|BAE73613.1| GTP-binding protein [Sodalis glossinidius str. 'morsitans'] Length = 424 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A AD F TL P L + G + +LAD G I Sbjct: 195 VPTVSLVGYTNAGKSTLFNRMTEAGVYAADQLFATLDPTLRRINVGDVGDTVLADTVGFI 254 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLHIV A + EN+ A Q +L E+ A + Sbjct: 255 RHLPHDLVAAFKATLQETRQATLLLHIVDAADTRISENIDAVDQ-VLAEIEANDIP---- 309 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++E + V S+ G G+ +++ L +++ Sbjct: 310 -TLLVMNKIDLLDDFVPRIDRDE---ENRPVRVWLSAHNGEGMALLMQALTERL 359 >gi|113968943|ref|YP_732736.1| GTP-binding protein, HSR1-related [Shewanella sp. MR-4] gi|114048919|ref|YP_739469.1| GTP-binding protein, HSR1-related [Shewanella sp. MR-7] gi|113883627|gb|ABI37679.1| GTP-binding protein, HSR1-related [Shewanella sp. MR-4] gi|113890361|gb|ABI44412.1| GTP-binding protein, HSR1-related [Shewanella sp. MR-7] Length = 435 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 4/107 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + ++G NAGKST ++T + AD F TL P L + ILAD G I++ Sbjct: 200 VSLVGYTNAGKSTLFNALTSSDVYAADQLFATLDPTLRKLDLPDGAVILADTVGFIRHLP 259 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY---QCILDELSA 264 H L+ T + +LLHIV +EN+ + Q +L+++ A Sbjct: 260 HDLVAAFKATLQETRQADLLLHIVDCADENMADNFEQVQNVLEDIDA 306 >gi|71017847|ref|XP_759154.1| hypothetical protein UM03007.1 [Ustilago maydis 521] gi|46098672|gb|EAK83905.1| hypothetical protein UM03007.1 [Ustilago maydis 521] Length = 368 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 2/114 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G +G P+ GKST ++ +T + A Y FTTL G +K + D+PGII+ Sbjct: 63 VASVGFVGFPSVGKSTLMSGLTGTTSEAAAYEFTTLTSVPGTMKVHGAPIQIIDLPGIIE 122 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + RT L+ IV + + ++ I +EL + L KK Sbjct: 123 GAKDGKGRGRQVIA-VARTCNLIFIVLDVGKPLKDK-AIIENELEGFGIRLNKK 174 >gi|328955564|ref|YP_004372897.1| GTP-binding protein HflX [Coriobacterium glomerans PW2] gi|328455888|gb|AEB07082.1| GTP-binding protein HflX [Coriobacterium glomerans PW2] Length = 443 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 80/182 (43%), Gaps = 25/182 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 I + G NAGKST + +T + AD F TL P K G + L D G I+ Sbjct: 212 IALAGYTNAGKSTLMNRLTGSDIMSADKLFATLDPTTRAFKLPGGRLCTLTDTVGFIQKL 271 Query: 221 HQGAGIGDRF---LKHTERTHVLLHIVSALEENV---QAAYQCILDELSAYNSELRKKIE 274 G+ D F L + ++L +V A +EN +A +LDE+ A SE R+ Sbjct: 272 PH--GLVDAFKSTLAEARDSDIILEVVDASDENYLRQMSAVDVVLDEIGA--SEQRRVTV 327 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH------DKIFS 328 + + ID +D L R+ + SS+ G GI ++LE L D + S Sbjct: 328 LNKIDLIDPLDRADLERRHPDAEL--------VSSVNGLGIERLLERLSCEASTLDSVIS 379 Query: 329 IR 330 +R Sbjct: 380 LR 381 >gi|254469962|ref|ZP_05083367.1| GTP-binding proten HflX [Pseudovibrio sp. JE062] gi|211961797|gb|EEA96992.1| GTP-binding proten HflX [Pseudovibrio sp. JE062] Length = 491 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 9/163 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 I +G NAGKST +T A+ D F TL P L +K + +E IL+D G I Sbjct: 240 IAFVGYTNAGKSTLFNRMTNAEVFAKDLLFATLDPTLRRLKLPHGREVILSDTVGFISEL 299 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCI---LDELSAYNSELRKKIEIV 276 H L+ + ++LH+ E+ +A + L+ L SE + IE+ Sbjct: 300 PHNLVAAFRATLEEVIQADIVLHVRDIAHEDTKAQSLDVNETLEMLGLKVSESDRVIEV- 358 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 ++ID +D R+K + + P S+I+G GIP +L Sbjct: 359 -YNKIDKLDE--AHREKLLESNSVDEGPISVSAISGDGIPDLL 398 >gi|115660738|ref|XP_780424.2| PREDICTED: hypothetical protein isoform 1 [Strongylocentrotus purpuratus] gi|115930879|ref|XP_001186702.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 628 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 16/165 (9%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA ++ Y FTT +G + Y + + D PGI+ ++ Sbjct: 173 LCGFPNVGKSSFMNKVTRADVEVQPYAFTTKSLFVGHMDYRYLRWQVVDTPGILDHS--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNSELR----KKIEIV 276 + DR + L H+ +A+ + + QC + +++ + S +R K I+ Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDVSEQCGHSVEEQMELFES-IRPLFANKPLII 286 Query: 277 GLSQIDTVDSDTLARKKNEL---ATQCGQVPFEFSSITGHGIPQI 318 ++ D V+ L+ ++ E A G + S++T GI Q+ Sbjct: 287 VANKTDIVELKELSEEQQEFFRKAEADGVTVIQTSTVTEQGIMQV 331 >gi|330507705|ref|YP_004384133.1| GTP-binding protein [Methanosaeta concilii GP-6] gi|328928513|gb|AEB68315.1| GTP-binding protein [Methanosaeta concilii GP-6] Length = 320 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 27/167 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +T AKP++A YPFTT +G K + + D PG++ Sbjct: 151 ILIAGYPNVGKSSFIIRITGAKPEVASYPFTTRGIIVGHFVRDDKRYQVVDTPGLL---- 206 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD--ELSAY--NSELRKKIEIVG 277 DR + +ER + V+AL ++Q ILD E Y +S+LR ++ Sbjct: 207 ------DRPM--SERNEIERQTVAAL-SHLQGVVLYILDPSEHCGYPLDSQLRLAEDLSN 257 Query: 278 LSQIDT--VDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 ++ V + ++ ++LA E S+ TG G+ +LE L Sbjct: 258 WIRLPMLIVANKVDIKRYSDLA--------EMSTETGEGVSLVLERL 296 >gi|157373937|ref|YP_001472537.1| GTP-binding protein, HSR1-related [Shewanella sediminis HAW-EB3] gi|157316311|gb|ABV35409.1| GTP-binding protein, HSR1-related [Shewanella sediminis HAW-EB3] Length = 432 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 1/94 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A + ++G NAGKST S+T + AD F TL P L ++ ILAD G I+ Sbjct: 197 LATVSLVGYTNAGKSTLFNSLTASNVYAADQLFATLDPTLRKLELRDGGIILADTVGFIR 256 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSALEENV 251 + H L+ T +LLHIV +E++ Sbjct: 257 HLPHDLVAAFKATLQETREADLLLHIVDCADEDM 290 >gi|258577497|ref|XP_002542930.1| nucleolar GTP-binding protein 1 [Uncinocarpus reesii 1704] gi|237903196|gb|EEP77597.1| nucleolar GTP-binding protein 1 [Uncinocarpus reesii 1704] Length = 673 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL S+T+A + Y FTT +G Y F D PGI+ + + Sbjct: 189 ICGYPNVGKSSFLKSITKADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 248 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC + D++ +NS K+ + Sbjct: 249 MNTIE-----MQSITAIAHLRSAILYFMDLSEQCGYSVSDQIKLFNSIKPLFSNKLVFIV 303 Query: 278 LSQIDTV---DSDTLARKK-NELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + D D +++ ++L T G + S T G+ + D++ + R Sbjct: 304 VNKIDVMRPEDLDPTTKEELDKLLTVSGVELLQLSCTTTEGVTAVKNAACDRLIAER 360 >gi|258576655|ref|XP_002542509.1| developmentally regulated GTP-binding protein 1 [Uncinocarpus reesii 1704] gi|237902775|gb|EEP77176.1| developmentally regulated GTP-binding protein 1 [Uncinocarpus reesii 1704] Length = 342 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 2/87 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGII 217 +A +G IG P+ GKST ++ +T + A Y FTTL G ++ G K IL D+PGII Sbjct: 38 VASVGFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTTVPGQVIYNGAKIQIL-DLPGII 96 Query: 218 KNAHQGAGIGDRFLKHTERTHVLLHIV 244 + A G G G + + + H++ ++ Sbjct: 97 QGAKDGKGRGRQVIAVAKTCHLIFIVL 123 >gi|291619089|ref|YP_003521831.1| HflX [Pantoea ananatis LMG 20103] gi|291154119|gb|ADD78703.1| HflX [Pantoea ananatis LMG 20103] Length = 426 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST ++T A AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNAITSANVYAADQLFATLDPTLRRLNVADVGEVVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +L+H++ A + EN+ A + +L+E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLMHVIDAADVRVNENIGAVNE-VLEEIDADEIP---- 311 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++E + V S+ +G GIP + + L +++ Sbjct: 312 -TLLIMNKIDMLDGFEPRIDRDE---ENMPVRVWLSAQSGVGIPLLWQALSERL 361 >gi|195150915|ref|XP_002016395.1| GL11553 [Drosophila persimilis] gi|194110242|gb|EDW32285.1| GL11553 [Drosophila persimilis] Length = 241 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 39/68 (57%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 65 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 124 Query: 220 AHQGAGIG 227 A G G G Sbjct: 125 AKDGKGRG 132 >gi|260774596|ref|ZP_05883508.1| GTP-binding protein HflX [Vibrio metschnikovii CIP 69.14] gi|260610390|gb|EEX35597.1| GTP-binding protein HflX [Vibrio metschnikovii CIP 69.14] Length = 429 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 6/108 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L ++ ILAD G I Sbjct: 197 IPTISLVGYTNAGKSTLFNQITSAGVYAADQLFATLDPTLRKIELLDVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILD 260 ++ H L+ T++ +LLH+V A EN+QA +L+ Sbjct: 257 RHLPHDLVAAFKATLQETQQADILLHVVDASDDRFRENIQAVDDVLLE 304 >gi|326478415|gb|EGE02425.1| GTP binding protein [Trichophyton equinum CBS 127.97] Length = 362 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 49 VASVGFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTTVPGQVLYNGAKIQMLDLPGIIQ 108 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 109 GAKDGKGRGRQVIAVAKTCHLIFIVL 134 >gi|317037280|ref|XP_001398900.2| GTP-binding protein RBG1 [Aspergillus niger CBS 513.88] Length = 368 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 64 VASVGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTTVPGQVMYNGAKIQILDLPGIIQ 123 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 124 GAKDGKGRGRQVIAVAKTCHLIFIVL 149 >gi|301095226|ref|XP_002896714.1| developmentally-regulated GTP-binding protein 1 [Phytophthora infestans T30-4] gi|262108775|gb|EEY66827.1| developmentally-regulated GTP-binding protein 1 [Phytophthora infestans T30-4] Length = 369 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 4/112 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +G++G P+ GKST L +T + A Y FTTL G + + D+PGII+ A Sbjct: 68 VGLVGFPSVGKSTLLTKLTGTFSESASYEFTTLTAIPGTLNYRGARIQILDLPGIIEGAK 127 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-ELSAYNSELRKK 272 G G G + + +V+L ++ A++ A ++ +++ EL + L KK Sbjct: 128 DGKGRGRQVIGTARTCNVILIVLDAMKP---ATHKKLIEFELEGFGIRLNKK 176 >gi|91088325|ref|XP_970263.1| PREDICTED: similar to 128up [Tribolium castaneum] gi|270011791|gb|EFA08239.1| hypothetical protein TcasGA2_TC005867 [Tribolium castaneum] Length = 367 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 41/72 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G +G P+ GKST L+++ ++A Y FTTL G +K + L D+PGII+ Sbjct: 64 ARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFL 231 A G G G + + Sbjct: 124 AKDGKGRGRQVI 135 >gi|46125727|ref|XP_387417.1| hypothetical protein FG07241.1 [Gibberella zeae PH-1] Length = 364 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 45/86 (52%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A IG IG P+ GKST ++ +T + A Y FTTL G V + D+PGII+ Sbjct: 49 VASIGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTSVPGQVVYNGAPLQIIDLPGIIE 108 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 109 GAKDGRGRGRQVIAVAKTCHLIFIVL 134 >gi|259481332|tpe|CBF74749.1| TPA: GTP binding protein, putative (AFU_orthologue; AFUA_1G05560) [Aspergillus nidulans FGSC A4] Length = 378 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 64 VASVGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTTVPGQVLYNGAKIQILDLPGIIQ 123 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 124 GAKDGKGRGRQVIAVAKTCHLIFIVL 149 >gi|239626280|ref|ZP_04669311.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239516426|gb|EEQ56292.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 346 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 24/113 (21%) Query: 179 VTRAKPKIADYPFTTLYPNLGIV----------KEGYK---------EFILADIPGIIKN 219 +T+A + A+YPF T+ PN+G+V E Y EF+ DI G++K Sbjct: 1 MTKAGAESANYPFCTIDPNVGVVPVPDVRLDRLTEMYNSEKTTPAVIEFV--DIAGLVKG 58 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEE-NVQAAYQCI--LDELSAYNSEL 269 A +G G+G++FL + ++H+V ++ NV CI L ++ N EL Sbjct: 59 ASKGEGLGNQFLSNIREVDAIVHVVRCFDDPNVIHVDGCIDPLRDIETINLEL 111 >gi|195426435|ref|XP_002061340.1| GK20864 [Drosophila willistoni] gi|194157425|gb|EDW72326.1| GK20864 [Drosophila willistoni] Length = 652 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 88/184 (47%), Gaps = 15/184 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ + Sbjct: 171 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + +R + + L H+ + + + + QC + +++ + S K I Sbjct: 230 ----LEERNVIEMQAITALAHLRACVLYFMDISEQCGHSLEEQVKLFESIKPLFTNKPLI 285 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQ---VPFEF-SSITGHGIPQILECLHDKIFSIRG 331 + +++ID + + L +++ E+ T+ + VP F S++ G+ ++ +++ S R Sbjct: 286 LAINKIDILTPEDLPKERQEIITKLQEDKSVPVMFMSTVQESGVMEVKTEACERLLSYRV 345 Query: 332 ENEF 335 + + Sbjct: 346 DQKM 349 >gi|261194703|ref|XP_002623756.1| GTP-binding protein YchF [Ajellomyces dermatitidis SLH14081] gi|239588294|gb|EEQ70937.1| GTP-binding protein YchF [Ajellomyces dermatitidis SLH14081] Length = 394 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST ++TR A++PF T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITRCSLGNPANFPFATIDPEEARVIVPDARYDWLCEHYKPKSRV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPVRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L+ + ELR K IE V Sbjct: 144 -LNIISEELRIKDIEFV 159 >gi|237834553|ref|XP_002366574.1| hypothetical protein TGME49_039340 [Toxoplasma gondii ME49] gi|211964238|gb|EEA99433.1| hypothetical protein TGME49_039340 [Toxoplasma gondii ME49] gi|221503637|gb|EEE29328.1| conserved hypothetical protein [Toxoplasma gondii VEG] Length = 1310 Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 23/46 (50%), Positives = 28/46 (60%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQ 48 F V G GG G +SFRREK + GGPDG GG+GGDV ++ Sbjct: 123 FFPPKAVTAEGGRGGEGCVSFRREKSLPKGGPDGAPGGKGGDVLLE 168 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 1/73 (1%) Query: 108 LDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGL 167 L + GQ+++LA GG+GG GNA F ++TN+ P G G+ + + L + AD+ ++G Sbjct: 641 LSRAGQQLLLARGGSGGRGNAAFLTNTNRHPTTVERGEEGERRHL-LVIPNFADVLVVGF 699 Query: 168 PNAGKSTFLASVT 180 +GK++ L + + Sbjct: 700 RGSGKTSLLQTAS 712 >gi|289613706|emb|CBI61547.1| unnamed protein product [Sordaria macrospora] Length = 367 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 45/86 (52%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A IG IG P+ GKST ++ +T + A Y FTTL G V + D+PGII+ Sbjct: 63 VASIGFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTSVPGQVTYNGAPLQIIDLPGIIE 122 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 123 GAKDGRGRGRQVIAVAKTCHLIFIVL 148 >gi|239613428|gb|EEQ90415.1| GTP-binding protein YchF [Ajellomyces dermatitidis ER-3] gi|327351931|gb|EGE80788.1| hypothetical protein BDDG_03729 [Ajellomyces dermatitidis ATCC 18188] Length = 394 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST ++TR A++PF T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITRCSLGNPANFPFATIDPEEARVIVPDARYDWLCEHYKPKSRV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPVRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L+ + ELR K IE V Sbjct: 144 -LNIISEELRIKDIEFV 159 >gi|220927637|ref|YP_002504546.1| GTP-binding proten HflX [Clostridium cellulolyticum H10] gi|219997965|gb|ACL74566.1| GTP-binding proten HflX [Clostridium cellulolyticum H10] Length = 596 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 16/164 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + I+G NAGKST L + + D F TL P+ + +E +L D G I+ Sbjct: 380 VAIVGYTNAGKSTLLNRFCGSSVFVEDKLFATLDPSARQLTLSDGREAVLIDTVGFIRKL 439 Query: 221 -HQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKIEIV 276 H L+ +LLH+V A ENV + + +L+EL A K I+ Sbjct: 440 PHDLIEAFKSTLEEAVHADMLLHVVDASNENVSMQISVVEKLLEELGAST-----KRTIL 494 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 L++ D V D +++ E S++TG+GI Q+LE Sbjct: 495 VLNKQDLVQED------RRISSVGYSAVCEISAVTGYGIEQLLE 532 >gi|119719308|ref|YP_919803.1| small GTP-binding protein [Thermofilum pendens Hrk 5] gi|119524428|gb|ABL77800.1| small GTP-binding protein [Thermofilum pendens Hrk 5] Length = 334 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 36/59 (61%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I + I G PN GKS+ L S+TRAKP++ YPFTT +G ++ + L D PG++ Sbjct: 168 IPTVIIAGAPNVGKSSLLKSLTRAKPEVKPYPFTTKELIVGHIEHPLGKIQLVDTPGLL 226 >gi|126465832|ref|YP_001040941.1| small GTP-binding protein [Staphylothermus marinus F1] gi|126014655|gb|ABN70033.1| small GTP-binding protein [Staphylothermus marinus F1] Length = 354 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 18/176 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGII--- 217 + I G+P GKST L +T AKP+I+ +PFTT G I E Y + L D PG++ Sbjct: 179 VIIAGMPQVGKSTLLKKLTHAKPEISPFPFTTKTIIAGHITVEPYGKITLIDTPGLLDRP 238 Query: 218 ---KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN---SELRK 271 KN + + LKH + L V+ +Y +LS YN L Sbjct: 239 LDRKNPIEYKAVLA--LKHLADITIYLFDVNP------QSYYTFEQQLSVYNDIKELLGD 290 Query: 272 KIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 K I+ +++ID + L ++ + G+ P S+ + + ++ L +K+ Sbjct: 291 KEMIIAINKIDITPREYLEKQCIRIKEVTGKEPLLISAEKEYNLDKLKMILINKLM 346 >gi|221486140|gb|EEE24410.1| conserved hypothetical protein [Toxoplasma gondii GT1] Length = 1291 Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 23/46 (50%), Positives = 28/46 (60%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQ 48 F V G GG G +SFRREK + GGPDG GG+GGDV ++ Sbjct: 112 FFPPKAVTAEGGRGGEGCVSFRREKSLPKGGPDGAPGGKGGDVLLE 157 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 1/73 (1%) Query: 108 LDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGL 167 L + GQ+++LA GG+GG GNA F ++TN+ P G G+ + + L + AD+ ++G Sbjct: 622 LSRSGQQLLLARGGSGGRGNAAFLTNTNRHPTTVERGEEGERRHL-LVIPNFADVLVVGF 680 Query: 168 PNAGKSTFLASVT 180 +GK++ L + + Sbjct: 681 RGSGKTSLLQTAS 693 >gi|254504147|ref|ZP_05116298.1| GTP-binding proten HflX [Labrenzia alexandrii DFL-11] gi|222440218|gb|EEE46897.1| GTP-binding proten HflX [Labrenzia alexandrii DFL-11] Length = 431 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 18/181 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST +T ++ D F TL P L + + +E IL+D G I + Sbjct: 202 VALVGYTNAGKSTLFNRLTESEVFAKDLLFATLDPTLRKITLPHGREIILSDTVGFISDL 261 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEI 275 H A L+ ++LH+ +S + + QA Q L+EL IE+ Sbjct: 262 PTHLVAAFR-ATLEEVLEADLILHVRDISHADTDAQAEDVQKTLEELGVDALTGAPIIEV 320 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI------LECLHDKIFSI 329 ++ID +D D A+ L+ + G+ P S++TG GI + HD I S+ Sbjct: 321 --WNKIDLLDKDYRAKL---LSEEQGEGPVALSAVTGEGIEHLSARVDSFMARHDDILSV 375 Query: 330 R 330 R Sbjct: 376 R 376 >gi|292655074|ref|YP_003534971.1| GTP-binding protein [Haloferax volcanii DS2] gi|291371680|gb|ADE03907.1| GTP-binding protein [Haloferax volcanii DS2] Length = 369 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 5/111 (4%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST + ++T A + +Y FTTL N G++K + D+PG+I+ Sbjct: 61 ATVALVGFPSVGKSTLINALTNADSETGEYEFTTLNVNPGMLKYKGANIQILDVPGLIEG 120 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR 270 A G G G L +++ ++S E Y+ + EL YN+++R Sbjct: 121 AAGGRGGGKEVLSVVRTADIVVFMLSVFE---IERYERLQQEL--YNNKIR 166 >gi|52425574|ref|YP_088711.1| HflX protein [Mannheimia succiniciproducens MBEL55E] gi|52307626|gb|AAU38126.1| HflX protein [Mannheimia succiniciproducens MBEL55E] Length = 448 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T+A AD F TL P L ++ + ILAD G I Sbjct: 217 IPTISLVGYTNAGKSTLFNRITQANVYAADQLFATLDPTLRRLQIQDVGTTILADTVGFI 276 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T +LLHI+ A + EN++A +L+E+ A + Sbjct: 277 RDLPHDLVSAFKSTLQETTEAGLLLHIIDAADPRKLENIEAV-NAVLEEIKAADLP---- 331 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ ++IDT+++ E Q V S+I+ GI + + +K+ Sbjct: 332 -TLLVYNKIDTLEN---LEPHIEYDDQHIPVAVYLSAISAEGIDLLFAAIREKL 381 >gi|298713744|emb|CBJ33718.1| PHflX, plastid HflX GTPase [Ectocarpus siliculosus] Length = 823 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 20/179 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----EGYKEFILADIPGII 217 + ++G NAGKST L ++TRA + F TL P VK + + E +L D G I Sbjct: 549 VALVGYTNAGKSTLLNTLTRAGVMAENMLFATLDPTTRKVKLSGLKVHPEVMLTDTVGFI 608 Query: 218 KNAHQGAGIGDR-FLKHTERTHVLLHIV---SALEENVQAAYQCILDELSAYNS---ELR 270 + R L+ V++HIV S E ++A +L E+ + + Sbjct: 609 QKLPTNLVAAFRATLEEVVEADVIVHIVDVSSPSREKQESAVTGVLGEMKTSDKPRLTMW 668 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 K++++ + + V D A +++EL S++TG G+ + CL + I ++ Sbjct: 669 NKLDLLPEEEQEQVRVD--AEERDELTVAA-------SAMTGEGLDDFVTCLEEAICAL 718 >gi|67527606|ref|XP_661684.1| hypothetical protein AN4080.2 [Aspergillus nidulans FGSC A4] gi|40739778|gb|EAA58968.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4] Length = 364 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 50 VASVGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTTVPGQVLYNGAKIQILDLPGIIQ 109 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 110 GAKDGKGRGRQVIAVAKTCHLIFIVL 135 >gi|302916987|ref|XP_003052304.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256733243|gb|EEU46591.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 367 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 45/86 (52%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A IG IG P+ GKST ++ +T + A Y FTTL G V + D+PGII+ Sbjct: 63 VASIGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTSVPGQVVYNGAPLQIIDLPGIIE 122 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 123 GAKDGRGRGRQVIAVAKTCHLIFIVL 148 >gi|303318431|ref|XP_003069215.1| GTP-binding protein, putative [Coccidioides posadasii C735 delta SOWgp] gi|240108901|gb|EER27070.1| GTP-binding protein, putative [Coccidioides posadasii C735 delta SOWgp] Length = 732 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 14/97 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-----------DYPFT-TLYPNLGIVKEGYKEFI 209 IG++G P++GKST L S T P+ A + T PN G EG + Sbjct: 335 IGLVGKPSSGKSTTLNSFTTIDPQRAIGYLQIDCACQRHNLTEKCKPNYGSCHEGRRSVP 394 Query: 210 --LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 L D+ G++ AH+G G+G++FL L+H+V Sbjct: 395 IELLDVAGLVPGAHEGKGLGNKFLDDLRHADALIHVV 431 >gi|224066088|ref|XP_002302008.1| predicted protein [Populus trichocarpa] gi|222843734|gb|EEE81281.1| predicted protein [Populus trichocarpa] Length = 227 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 29/151 (19%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDG-----------------GS-----G 39 K+ D+ + +RSGDGG G + + G G GS G Sbjct: 78 KYFDQVIITVRSGDGGHGSVLNMPNQRNNNNGSKGKQEKKSRYKSSYKRDFHGSLILPLG 137 Query: 40 GRGGDVWIQATSNLNTLIDFRYQQHFKAQHG----EKGMKRNR--SGAKGEDVVLTVPVG 93 G GGDV I A ++L++ + F A+ G G+ ++ +G + + VPVG Sbjct: 138 GHGGDVVIYADEGKDSLLELHSKSRFNAKRGGNVDAMGVLTSQLHNGFAAPTLRIPVPVG 197 Query: 94 TQVFEEDGISLICDLDQEGQRIILAPGGNGG 124 T V + G+ L+ DL Q G I++A GG GG Sbjct: 198 TVVKRKRGM-LLADLAQPGDEILVARGGQGG 227 >gi|119496681|ref|XP_001265114.1| GTP binding protein, putative [Neosartorya fischeri NRRL 181] gi|119413276|gb|EAW23217.1| GTP binding protein, putative [Neosartorya fischeri NRRL 181] Length = 367 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 63 VASVGFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTTVPGQVLYNGAKIQILDLPGIIQ 122 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 123 GAKDGKGRGRQVIAVAKTCHLIFIVL 148 >gi|138896062|ref|YP_001126515.1| GTP-binding protein [Geobacillus thermodenitrificans NG80-2] gi|134267575|gb|ABO67770.1| GTP-binding protein [Geobacillus thermodenitrificans NG80-2] Length = 302 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D P TT G+ + + I D PG+ K Sbjct: 11 VAIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTDDEAQIIFIDTPGVHKPK 70 Query: 221 HQGAGIGDRFLK----HTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K ++L +V+A EE I++ L+ N+ + + Sbjct: 71 HK---LGDFMMKVALNALREVDLILFMVNA-EEGFGRGEAFIIERLNEVNTPV-----FL 121 Query: 277 GLSQIDTVDSDTL---ARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + +L T VP S++ G+ + ++LE + ++ Sbjct: 122 VINKIDRVHPDELLPIIDRYKDLYTFAEIVP--ISALEGNNVERLLEQIKQRL 172 >gi|124028408|ref|YP_001013728.1| GTPase [Hyperthermus butylicus DSM 5456] gi|123979102|gb|ABM81383.1| predicted GTPase [Hyperthermus butylicus DSM 5456] Length = 375 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 93/194 (47%), Gaps = 23/194 (11%) Query: 154 LKLKLIAD----IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI 209 LK ++A+ + + G+P+AGKST + ++ A+P+IA YPFTT +G + F Sbjct: 171 LKTHVVAEGLPVVVVAGIPSAGKSTLVRRISTAEPEIASYPFTTKSIIVGKARHQGMVFY 230 Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERT--HVLLHIVSALEENVQAA--YQCILDELSAY 265 + D PGI++ + +R +T ++L ++ E VQ+ + +L + Sbjct: 231 VVDTPGILERPLELHNEIERKALAALKTLPDIVLVLLDPSPEKVQSLENQERLLRSIYEG 290 Query: 266 NSELRKKIEIVGLSQIDTVDSD----------TLARKKNELATQCGQVPFEFSSITGHGI 315 + R+ I+ ++++D + +L R N+ + +C P S++ G G+ Sbjct: 291 IVKPREAGLIIAVNKVDASAREEVEKAIEMASSLLRDVNQ-SVRCVNKPIPISALHGQGV 349 Query: 316 PQIL----ECLHDK 325 ++L ECL K Sbjct: 350 GELLDVVIECLKRK 363 >gi|126466171|ref|YP_001041280.1| small GTP-binding protein [Staphylothermus marinus F1] gi|126014994|gb|ABN70372.1| small GTP-binding protein [Staphylothermus marinus F1] Length = 389 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 35/55 (63%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIP 214 A I +IGLPN+GKST + +T + +IADYPF+T P G+++ F L D P Sbjct: 82 AQIVVIGLPNSGKSTLVKQLTGTRTRIADYPFSTNRPVPGMLRYQDIYFQLVDTP 136 >gi|83648041|ref|YP_436476.1| GTPase [Hahella chejuensis KCTC 2396] gi|83636084|gb|ABC32051.1| GTPase [Hahella chejuensis KCTC 2396] Length = 430 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 19/165 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + I ++G NAGKST ++ + AD F TL P L + E Y +LAD G I Sbjct: 197 VPTISLVGYTNAGKSTLFNRISLSDVYAADQLFATLDPTLRRINLENYGPVVLADTVGFI 256 Query: 218 KNAHQGAGIGDRF---LKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELR 270 + H + D F L+ T +LLH+V A + EN++ + +L E+ A + Sbjct: 257 R--HLPHKLVDAFRATLEETCNASLLLHVVDASDPKRRENIEQVEE-VLKEIGADD---- 309 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 I L + VD +A + EL + S++TG G+ Sbjct: 310 ----IPSLFVFNKVDRLEVAEPRLELNENGEPIRVWVSAVTGEGL 350 >gi|327309386|ref|XP_003239384.1| GTP-binding protein [Trichophyton rubrum CBS 118892] gi|326459640|gb|EGD85093.1| GTP-binding protein [Trichophyton rubrum CBS 118892] Length = 413 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 28/109 (25%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L S+T A K+ FTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNSLTDASSKVG--IFTTIDPQRAIGYLQVDCACSRYNLQDRCKPN 64 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G EG + L D+ G++ AH+G G+G++FL L+H+V Sbjct: 65 YGGCHEGRRSVPIELLDVAGLVPGAHEGKGLGNKFLDDLRHADALIHVV 113 >gi|169837642|ref|ZP_02870830.1| translation-associated GTPase [candidate division TM7 single-cell isolate TM7a] Length = 92 Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 22/46 (47%), Positives = 33/46 (71%), Gaps = 1/46 (2%) Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIV 201 K + IGI+GLPN GKST ++T+ + + A+YPF T+ PN+G+V Sbjct: 15 KRMIGIGIVGLPNVGKSTLFNAITKTQNAEAANYPFATIEPNVGLV 60 >gi|269795601|ref|YP_003315056.1| GTP-binding proten HflX [Sanguibacter keddieii DSM 10542] gi|269097786|gb|ACZ22222.1| GTP-binding proten HflX [Sanguibacter keddieii DSM 10542] Length = 515 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 8/170 (4%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADI 213 K I + I G NAGKS+ L ++T A + + F TL P + K + + LAD Sbjct: 289 KRNAIPSVAIAGYTNAGKSSLLNALTGAGVLVENALFATLDPTVRRTKTPDGRVYTLADT 348 Query: 214 PGIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G +++ HQ L+ + +LLH+V A + + + L L Sbjct: 349 VGFVRSLPHQLVEAFRSTLEEVADSDLLLHVVDASHPDPEGQIAAVRHVLEGIPGAL-DV 407 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 E++ L++ D D DT+AR ++ T S+ TG GI ++L+ + Sbjct: 408 PEVIVLNKADLADPDTIARLRSRERTT-----LVVSAHTGEGITELLDLI 452 >gi|288941250|ref|YP_003443490.1| ferrous iron transport protein B [Allochromatium vinosum DSM 180] gi|288896622|gb|ADC62458.1| ferrous iron transport protein B [Allochromatium vinosum DSM 180] Length = 797 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/171 (22%), Positives = 80/171 (46%), Gaps = 17/171 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 IG++G PN GK+T ++T ++ ++ ++ T+ G + G EF L D+PG + Sbjct: 18 IGVVGNPNCGKTTLFNALTGSRQQVGNWSGVTVERKTGRYRFGESEFTLVDLPGTYSLDV 77 Query: 220 AHQGAGIGDRFLK---HTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIE 274 + +R + H V+L+I+ S+LE N+ Q I E+ + + Sbjct: 78 TDPSVSLDERIARDFVHAREADVILNILDASSLERNLYLTTQLI---------EMGRPL- 127 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDK 325 ++ L+ +D ++ + L+ + G + G G+P++ + L ++ Sbjct: 128 VLALNMMDVAEARGIQIDIAALSKRLGCPVIPLVAANGRGLPELKQTLFEQ 178 >gi|156405852|ref|XP_001640945.1| predicted protein [Nematostella vectensis] gi|156228082|gb|EDO48882.1| predicted protein [Nematostella vectensis] Length = 616 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 14/178 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PG++ + Sbjct: 173 VCGFPNVGKSSFMNKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGVLDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + +R + L H+ SA+ + QC + ++ +N+ K IV Sbjct: 230 --LEERNTIEMQAITALAHLRSAVLYVTDISEQCGHTLEQQVELFNNIKPLFSNKPLIVV 287 Query: 278 LSQIDTVDSDTLARKKNELAT---QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 L++ID + + L+ ++ EL Q G S+ + G+ + D + + R E Sbjct: 288 LNKIDVIRPEDLSEERKELLKGFEQEGVTILPMSTFSEEGVMDVRNTACDLLLAQRVE 345 >gi|116749952|ref|YP_846639.1| TGS domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116699016|gb|ABK18204.1| TGS domain protein [Syntrophobacter fumaroxidans MPOB] Length = 328 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 36/60 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + + G PN GKS+ L +++ AKP++AD+P +T P G+V +F + D P I + Sbjct: 81 AQVVLAGAPNTGKSSLLGALSNAKPEVADFPHSTWKPTPGMVPYENIQFQMVDTPPITRE 140 >gi|46202523|ref|ZP_00053076.2| COG2262: GTPases [Magnetospirillum magnetotacticum MS-1] Length = 421 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 13/172 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST +TRA+ D F TL P + +V ++ IL+D G I + Sbjct: 194 VALVGYTNAGKSTLFNQLTRAEVLAKDMLFATLDPTMRTLVLPSGRKIILSDTVGFISDL 253 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 H+ L+ +++H+ +S + Q+A +L EL R +E Sbjct: 254 PHELVAAFRATLEEVLEADIVVHVRDISHPDTEAQSADVDTVLKELGLAEVVDRGLVE-- 311 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKI 326 L++ID +D + +++E+ Q + S+ITG G+ ++L L ++ Sbjct: 312 ALNKIDLLDEE----RRHEVLNQARRRDGVMALSAITGQGVDELLAELDRRL 359 >gi|221058068|ref|XP_002261542.1| nucleolar GTP-binding protein 1 [Plasmodium knowlesi strain H] gi|194247547|emb|CAQ40947.1| nucleolar GTP-binding protein 1, putative [Plasmodium knowlesi strain H] Length = 708 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 17/179 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ V+RA ++ Y FTT +G F + D PG++ Sbjct: 174 ILLAGAPNVGKSSFINIVSRANVEVQPYSFTTTNLYVGHFDHKLNRFQVIDTPGLL---- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + +R L HI + + + +C I ++++ ++S R K + Sbjct: 230 -DRSLENRNTIEMTTITALAHINGVILFIIDISEECGMSIKEQVNLFHSIRTLFRNKSVV 288 Query: 276 VGLSQIDTVDSDTLARKKNELATQC---GQVPFE---FSSITGHGIPQILECLHDKIFS 328 +G ++ID + D+L+ L + +VP + FS++TG G+ + E D + S Sbjct: 289 IGFNKIDKTNLDSLSVDNKMLIKEILDDAKVPVKFCSFSTLTGVGVEEAKEVACDMLKS 347 >gi|58264836|ref|XP_569574.1| cytoplasm protein [Cryptococcus neoformans var. neoformans JEC21] gi|134109677|ref|XP_776388.1| hypothetical protein CNBC4430 [Cryptococcus neoformans var. neoformans B-3501A] gi|321253617|ref|XP_003192794.1| GTP-binding protein of the DRG family that interacts with translating ribosomes; Rbg1p [Cryptococcus gattii WM276] gi|50259064|gb|EAL21741.1| hypothetical protein CNBC4430 [Cryptococcus neoformans var. neoformans B-3501A] gi|57225806|gb|AAW42267.1| cytoplasm protein, putative [Cryptococcus neoformans var. neoformans JEC21] gi|317459263|gb|ADV21007.1| GTP-binding protein of the DRG family that interacts with translating ribosomes, putative; Rbg1p [Cryptococcus gattii WM276] Length = 368 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKSTF++ +T + A Y FTTL G + + D+PGII+ Sbjct: 64 ATVTVIGFPSVGKSTFMSKLTGTHSEAASYEFTTLTTVPGQMTYNGARIQILDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + +++ ++ L+ A + +EL + L KK Sbjct: 124 AKDGKGRGRQVIAVARTCNLIFIVLDVLKPLNDLA--ILTNELEGFGIRLNKK 174 >gi|320102343|ref|YP_004177934.1| small GTP-binding protein [Isosphaera pallida ATCC 43644] gi|319749625|gb|ADV61385.1| small GTP-binding protein [Isosphaera pallida ATCC 43644] Length = 332 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 11/139 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G PNAGKS LA++T AKP+IA YPFTT P G++ + L D P I ++ Sbjct: 86 VVLVGAPNAGKSALLAALTAAKPEIAPYPFTTRIPIPGMMATRGVKIQLIDTPAISRDVM 145 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQI 281 + G + V+L + S ++++ + L+ L+A K+ +V + Sbjct: 146 EPWLPG-----LVRQADVVLLVASLADDDLIDGVEVTLERLAA------SKVHLVAQPPV 194 Query: 282 DTVDSDTLARKKNELATQC 300 D D T ATQC Sbjct: 195 DDEDETTHYLPTLLAATQC 213 >gi|302412062|ref|XP_003003864.1| GTP-dependent nucleic acid-binding protein engD [Verticillium albo-atrum VaMs.102] gi|261357769|gb|EEY20197.1| GTP-dependent nucleic acid-binding protein engD [Verticillium albo-atrum VaMs.102] Length = 214 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 35/186 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLG--IVKEGYKEFI---------- 209 GI+GL N GKST ++T+ A++P+ T+ P IV + +++ Sbjct: 24 GIVGLANVGKSTLFQAITKCNLGNPANFPYATIDPEEARVIVPDARYDWLCEKYNPKSRV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V + ++ +V+ D Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRSFDDAEIIHVEGDVNPTRD 143 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGH--GIPQI 318 L + ELR L I+ V+ A+KK L+ CGQ E + I +I Sbjct: 144 -LDIISEELR-------LKDIEFVEKALEAQKKKTLS--CGQ-SLEMKKMIAEQDTIQKI 192 Query: 319 LECLHD 324 ++ L D Sbjct: 193 IDWLKD 198 >gi|119187731|ref|XP_001244472.1| hypothetical protein CIMG_03913 [Coccidioides immitis RS] gi|303316812|ref|XP_003068408.1| GTP-binding protein RBG1, putative [Coccidioides posadasii C735 delta SOWgp] gi|240108089|gb|EER26263.1| GTP-binding protein RBG1, putative [Coccidioides posadasii C735 delta SOWgp] gi|320038251|gb|EFW20187.1| GTP-binding protein [Coccidioides posadasii str. Silveira] Length = 367 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 63 VASVGFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTTVPGQVLYNGAKIQILDLPGIIQ 122 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 123 GAKDGKGRGRQVIAVAKTCHLIFIVL 148 >gi|268553941|ref|XP_002634958.1| Hypothetical protein CBG13493 [Caenorhabditis briggsae] gi|187028526|emb|CAP32281.1| hypothetical protein CBG_13493 [Caenorhabditis briggsae AF16] Length = 659 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 14/178 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ +VTRA ++ Y FTT +G + + + + D PGI+ Sbjct: 174 LCGFPNVGKSSFINNVTRADVEVQPYAFTTKALYVGHLDYRFLRWQVIDTPGILDQP--- 230 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + DR + L H+ +++ + + QC I ++L + S K ++G Sbjct: 231 --LEDRNTIEMQAVTALAHLKASVLFMMDVSEQCDRTIEEQLHLFESIRPLFANKPVLIG 288 Query: 278 LSQIDTVDSDTLARKKNELATQCGQ--VPF-EFSSITGHGIPQILECLHDKIFSIRGE 332 L+++D L K L Q + +P E S++T GI + + D++ + R E Sbjct: 289 LNKVDIRHRADLPADKAALLDQLEKEGIPIVETSTLTQEGIMSLRDRACDELLAQRVE 346 >gi|210630493|ref|ZP_03296480.1| hypothetical protein COLSTE_00365 [Collinsella stercoris DSM 13279] gi|210160445|gb|EEA91416.1| hypothetical protein COLSTE_00365 [Collinsella stercoris DSM 13279] Length = 359 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/40 (55%), Positives = 29/40 (72%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV 201 IGI+GLPN GKST ++T+ A+YPF T+ PN+GIV Sbjct: 5 IGIVGLPNVGKSTLFTALTKKGGLAANYPFATIDPNVGIV 44 >gi|290559678|gb|EFD93004.1| GTP-binding protein HSR1-related protein [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 379 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 26/108 (24%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--------------------- 200 IGIIG N GKST ++T + +I D FTT+ PN GI Sbjct: 3 IGIIGRTNVGKSTLFKALTLEEVEIEDRSFTTISPNKGIGYATIECPEKRFSVKCIPHNA 62 Query: 201 -VKEGYKEFI---LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 K G + FI L D+ G+I+ A +G G+G++FL ++ ++ Sbjct: 63 PCKNGTR-FIPVNLIDVAGLIEGASEGKGLGNKFLSDIMEADAIIEVI 109 >gi|110669025|ref|YP_658836.1| GTP-binding protein [Haloquadratum walsbyi DSM 16790] gi|109626772|emb|CAJ53240.1| GTP-binding protein [Haloquadratum walsbyi DSM 16790] Length = 324 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 12/87 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ ++TRA +IA YPFTT ++G + + + D PG++ Sbjct: 159 IVVAGYPNVGKSSFVNAITRADNEIAHYPFTTTGIHVGHFERNRIRYQIVDTPGLL---- 214 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALE 248 DR TER + VSA+E Sbjct: 215 ------DR--PATERNDIERQAVSAIE 233 >gi|7481969|pir||S77885 probable GTP-binding protein MC231 - Mycoplasma capricolum (fragment) Length = 87 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 23/54 (42%), Positives = 33/54 (61%) Query: 39 GGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPV 92 GG GG V+ Q ++L+D + Q+ + AQ G KG +N GA GED ++ VPV Sbjct: 22 GGDGGSVYFQGDEXKHSLLDLKLQKKYSAQDGFKGDIKNMHGANGEDKIIKVPV 75 >gi|302383080|ref|YP_003818903.1| GTP-binding protein Era [Brevundimonas subvibrioides ATCC 15264] gi|302193708|gb|ADL01280.1| GTP-binding protein Era [Brevundimonas subvibrioides ATCC 15264] Length = 315 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 27/179 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI----- 216 IIG PNAGKST + +T +K I TT +P GI EG + +L D PGI Sbjct: 13 AIIGAPNAGKSTLVNRLTGSKVSIVTQKVQTTRFPVRGIAMEGESQIVLVDTPGIFTPRR 72 Query: 217 ------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA------AYQCILDELSA 264 + +A GA D + + HI SA +E A + I+ L A Sbjct: 73 RLDRAMVASAWGGAQDADVVVHLIDAAS---HIASAGKEGEAADRRSAEDTETIIANLKA 129 Query: 265 YNSELRKKIEIVGLSQIDTVDSDTLARKKNEL-ATQCGQVPFEFSSITGHGIPQILECL 322 N+++ I+ L++ID + DTL + L T + S+++G G+ + + L Sbjct: 130 SNTQV-----ILALNKIDGMRRDTLLALSHALFETGVYSEVYMISALSGDGVDDLKQRL 183 >gi|154484696|ref|ZP_02027144.1| hypothetical protein EUBVEN_02413 [Eubacterium ventriosum ATCC 27560] gi|149734544|gb|EDM50461.1| hypothetical protein EUBVEN_02413 [Eubacterium ventriosum ATCC 27560] Length = 410 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 26/179 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK-----EFILADIPGI 216 I I+G NAGKST L ++T A+ D F TL P YK E +L D G Sbjct: 200 IAIVGYTNAGKSTLLNTLTDARVLEEDKLFATLDPT----TRNYKLPDGQEVLLTDTVGF 255 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRK 271 I+ H L+ + + +++H+V + +++NVQA Y + N E++ Sbjct: 256 IRKLPHHLIDAFRSTLEEAKYSDIIIHVVDSSNPVMDKNVQAVYDTL------KNLEVKD 309 Query: 272 KIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 KI I ++ID ++ + + N E + G G+ ++ E + + S+R Sbjct: 310 KIIITVFNKIDKLEEKPIMKDFN------ADYTVETAIKKGIGLDELNEIIEKALKSMR 362 >gi|322693436|gb|EFY85296.1| developmentally regulated GTP-binding protein 1 [Metarhizium acridum CQMa 102] Length = 435 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 45/86 (52%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A IG IG P+ GKST ++ +T + A Y FTTL G V + D+PGII+ Sbjct: 64 VASIGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTSVPGQVVYNGAPLQIIDLPGIIE 123 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 124 GAKDGRGRGRQVIAVAKTCHLIFIVL 149 >gi|197122169|ref|YP_002134120.1| GTP-binding protein HSR1-related [Anaeromyxobacter sp. K] gi|196172018|gb|ACG72991.1| GTP-binding protein HSR1-related [Anaeromyxobacter sp. K] Length = 330 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 36/53 (67%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +IG N+GKS+ LA++T A+P+IA+YPFTT P G+++ + L D P + Sbjct: 85 MIGPANSGKSSLLAALTHARPEIAEYPFTTRDPLPGMMEFEDVQVQLVDTPAV 137 >gi|25145602|ref|NP_741289.1| hypothetical protein T07A9.9 [Caenorhabditis elegans] gi|22532787|gb|AAM97948.1| Hypothetical protein T07A9.9b [Caenorhabditis elegans] Length = 633 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 14/178 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ +VTRA ++ Y FTT +G + + + + D PGI+ Sbjct: 174 LCGFPNVGKSSFINNVTRADVEVQPYAFTTKALYVGHLDYRFLRWQVIDTPGILDQP--- 230 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + DR + L H+ +++ + + QC I ++L + S K ++G Sbjct: 231 --LEDRNTIEMQAVTALAHLKASVLFMMDVSEQCDRSIEEQLHLFESIRPLFANKPVLIG 288 Query: 278 LSQIDTVDSDTLARKKNELATQCGQ--VP-FEFSSITGHGIPQILECLHDKIFSIRGE 332 L+++D L +K L Q + +P E S++T G+ + + D++ + R E Sbjct: 289 LNKVDIRHRSDLPPEKAALLDQLEKEGIPIIETSTLTQEGVMGLRDRACDELLAQRVE 346 >gi|15805178|ref|NP_293865.1| GTP-binding protein HflX [Deinococcus radiodurans R1] gi|6457805|gb|AAF09728.1|AE001876_5 GTP-binding protein HflX [Deinococcus radiodurans R1] Length = 525 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 27/182 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRA--KPK---IADYPFTTLYPNLGIVKEGYKE----FILAD 212 + I+G NAGKST L S T A +P+ + F TL P ++GY E I D Sbjct: 340 VSIVGYTNAGKSTLLNSFTHAAEEPRRVLAENKLFATLRPT---SRQGYIEGIGQVIFTD 396 Query: 213 IPGIIKNAHQGAGIGDR-FLKHTERTHVLLHIVSALE---ENVQAAYQCILDELSAYNSE 268 G I++ + R L+ VLLH+V A E A ILD+L Sbjct: 397 TVGFIRDLPKDLSRAFRSTLEEIGDADVLLHVVDAASPGAEQRLDAVNRILDDLG----- 451 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 R +V L++ D + + LAR++ + G +P S++ G+ ++ E L D + S Sbjct: 452 FRDMPTVVALNKADRAEPEVLAREQE----RTGGIP--VSALKNIGLTELKEALGDAVAS 505 Query: 329 IR 330 ++ Sbjct: 506 VQ 507 >gi|325958293|ref|YP_004289759.1| small GTP-binding protein [Methanobacterium sp. AL-21] gi|325329725|gb|ADZ08787.1| small GTP-binding protein [Methanobacterium sp. AL-21] Length = 364 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 3/101 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G P+ GKST L +T A+ K Y FTTL G++ + + DIPGII A Sbjct: 64 VVLLGFPSVGKSTILNQLTNAESKTGAYEFTTLDIVPGVMHYRGAKIQILDIPGIITGAS 123 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 +G G G L +L ++ + ILDEL Sbjct: 124 KGKGRGREILSVARNADFILMVLDIFNPQ---HMKVILDEL 161 >gi|115391711|ref|XP_001213360.1| hypothetical protein ATEG_04182 [Aspergillus terreus NIH2624] gi|114194284|gb|EAU35984.1| hypothetical protein ATEG_04182 [Aspergillus terreus NIH2624] Length = 473 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST ++T++ A++P+ T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITKSSLGNPANFPYATIDPEEARVIVPDERFDWLCEHYKPKSQV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ I D Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPIRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L+ N ELR K IE V Sbjct: 144 -LTIINEELRIKDIEFV 159 >gi|312210624|emb|CBX90710.1| similar to nucleolar GTP-binding protein [Leptosphaeria maculans] Length = 670 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 15/182 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL S++RA ++ Y FTT +G F D PGI+ +A + Sbjct: 189 IAGFPNVGKSSFLKSISRADVEVQPYAFTTKSLYVGHFDYKMLRFQAVDTPGILDHALED 248 Query: 224 AGIGDRFLKHTE---RTHVLLHIVSALEENVQAAYQCILDELSAYNS---ELRKKIEIVG 277 ++H H+ HI+ ++ + Q Y + +++ +N+ K+ V Sbjct: 249 MNT----IEHQSICAIAHLRAHILYFMDLSEQCGY-SVASQIALFNNIKPLFANKLISVV 303 Query: 278 LSQIDTVDSDTL-ARKKNELAT--QCGQVP-FEFSSITGHGIPQILECLHDKIFSIRGEN 333 +++ID + D L A + +L + + G+V E S T G+ + + D++ + R Sbjct: 304 INKIDLMKPDQLDAETQEQLQSMLKSGEVEMLELSCNTLEGVMAVRNSVCDRLIAARNAE 363 Query: 334 EF 335 + Sbjct: 364 KL 365 >gi|238503966|ref|XP_002383215.1| GTP binding protein, putative [Aspergillus flavus NRRL3357] gi|220690686|gb|EED47035.1| GTP binding protein, putative [Aspergillus flavus NRRL3357] Length = 350 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 50 VASVGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTTVPGQVLYNGAKIQILDLPGIIQ 109 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 110 GAKDGKGRGRQVIAVAKTCHLIFIVL 135 >gi|254475433|ref|ZP_05088819.1| GTP-binding proten HflX [Ruegeria sp. R11] gi|214029676|gb|EEB70511.1| GTP-binding proten HflX [Ruegeria sp. R11] Length = 423 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 13/180 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKN 219 + ++G NAGKST +T A+ D F TL P + V+ +G E IL+D G I + Sbjct: 205 VALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVELPDG-PEIILSDTVGFISD 263 Query: 220 AHQGAGIGDR-FLKHTERTHVLLHI--VSALEENVQA-AYQCILDELSAYNSELRKKIEI 275 R L+ V++H+ +S E QA + IL L +S R +IE+ Sbjct: 264 LPTELVAAFRATLEEVLAADVVVHVRDISHEESQNQADDVEAILTSLGVDDS--RARIEV 321 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 +++D + D ++ + G S+I+G G+P++L + +K+ S+R E++ Sbjct: 322 --WNKLDLLSEDEAEARRQRAEREDG--IHAISAISGEGLPRLLADIAEKLRSVRHEDDI 377 >gi|213405461|ref|XP_002173502.1| GTP-binding protein RBG1 [Schizosaccharomyces japonicus yFS275] gi|212001549|gb|EEB07209.1| GTP-binding protein RBG1 [Schizosaccharomyces japonicus yFS275] Length = 366 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + +G IG P+ GKST ++ +T + A Y FTTL G++ + + D+PGII+ Sbjct: 63 VGTVGFIGFPSVGKSTLMSELTGTVSEAAAYEFTTLTTVPGVMHHNGAKIQILDLPGIIE 122 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + RT L+ IV Sbjct: 123 GAKDGRGRGKQVIT-VARTCNLIFIV 147 >gi|114566205|ref|YP_753359.1| Fe2+ transport system protein B-like protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337140|gb|ABI67988.1| Fe2+ transport system protein B-like protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 601 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 19/169 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I IIG PN GKS FL ++ + +++YP T+ + VK G KE + D PGI Sbjct: 3 IVIIGNPNVGKSAFLNRLSGSNILVSNYPGTSTTISANPVKIGKKEITIYDTPGIYSIFS 62 Query: 222 QG---AGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIV 276 +G I D F + E ++L+IV A LE N+ +Y+ ++D Sbjct: 63 EGEEQKAIRDLFAR--EEVDLILNIVDASNLERNLVLSYE-LMDLGLPVLLL-------- 111 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHD 324 L+QID + + R +L ++ ++P FS+ TG G+ ++ E + Sbjct: 112 -LNQIDRARALGI-RINGKLLSELLKIPVIPFSATTGEGLQEVWEIMES 158 >gi|322707266|gb|EFY98845.1| GTP binding protein [Metarhizium anisopliae ARSEF 23] Length = 357 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 45/86 (52%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A IG IG P+ GKST ++ +T + A Y FTTL G V + D+PGII+ Sbjct: 64 VASIGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTSVPGQVVYNGAPLQIIDLPGIIE 123 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 124 GAKDGRGRGRQVIAVAKTCHLIFIVL 149 >gi|61744139|gb|AAX55653.1| GTP binding protein [Gibberella moniliformis] Length = 368 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 45/86 (52%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A IG IG P+ GKST ++ +T + A Y FTTL G V + D+PGII+ Sbjct: 49 VASIGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTSVPGQVVYNGAPLQIIDLPGIIE 108 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 109 GAKDGRGRGRQVIAVAKTCHLIFIVL 134 >gi|307822499|ref|ZP_07652730.1| ribosome-associated GTPase EngA [Methylobacter tundripaludum SV96] gi|307736103|gb|EFO06949.1| ribosome-associated GTPase EngA [Methylobacter tundripaludum SV96] Length = 465 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 90/179 (50%), Gaps = 11/179 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR++ +AD+ T G VK G + ++ D GI Sbjct: 1 MLPVIALVGRPNVGKSTLFNYLTRSRDALVADFSGLTRDRQYGRVKLGDRPCLVVDTGGI 60 Query: 217 IKNAHQGAGIGDRFLK-HTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 +A + ++ E ++ +V A E + A+ + I D L +L+K + + Sbjct: 61 ADDAEGIESFARKQVQVALEEADIVFFMVDA-REGLSASDKVIADTL----RKLQKPVIL 115 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 V +++D +D+ T A LA G+ P + ++ G GIP++LE ++ + +GE E Sbjct: 116 VT-NKVDGLDASTAASDFYSLA--LGE-PVKIAASHGKGIPELLEKVNQLLPPDKGEVE 170 >gi|221234570|ref|YP_002517006.1| GTP-binding protein Era [Caulobacter crescentus NA1000] gi|13959353|sp|P58071|ERA_CAUCR RecName: Full=GTPase Era gi|254783291|sp|B8H630|ERA_CAUCN RecName: Full=GTPase Era gi|220963742|gb|ACL95098.1| GTP-binding protein era [Caulobacter crescentus NA1000] Length = 316 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 80/190 (42%), Gaps = 33/190 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 IIG PNAGKST + + AK I TT +P G+ EG + +L D PGI Sbjct: 14 AIIGAPNAGKSTLVNRMVGAKVSIVTQKVQTTRFPVRGVAIEGDTQIVLVDTPGIFSPRR 73 Query: 222 QGAGIGDRFLKH-----TERTHVLLHIVSALEENVQAA-------------YQCILDELS 263 + DR + +E +H+V E A Q I++ L Sbjct: 74 R----LDRAMVRAAWAGSEEAEATVHLVDVQAELASRADKATPGEYRSAQDVQTIIEGLK 129 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDT-LARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 A + ++ I+ L++ID + DT LA K+ T F S+ TG G+ E L Sbjct: 130 AADRKV-----ILALNKIDGIKRDTLLAVAKDFFDTGVYSDVFMISASTGAGV----EDL 180 Query: 323 HDKIFSIRGE 332 K+ S+ E Sbjct: 181 TAKLVSMMPE 190 >gi|297526811|ref|YP_003668835.1| small GTP-binding protein [Staphylothermus hellenicus DSM 12710] gi|297255727|gb|ADI31936.1| small GTP-binding protein [Staphylothermus hellenicus DSM 12710] Length = 696 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 17/169 (10%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 ++G++G PN GKST +T K +A++P T+ ++G + + D+PGI Sbjct: 7 EVGVVGQPNVGKSTLFNVLTGRKVHVANWPGVTVEKHVGERIYRGRRIVFVDLPGI--YG 64 Query: 221 HQGAGIGDRFLKH---TERTHVLLHIVSAL--EENVQAAYQCILDELSAYNSELRKKIEI 275 I +R + T++ VLL +V +L E + A Q + E+ ++ + Sbjct: 65 FSATTIEERIARKYILTQQPDVLLVLVDSLNPERTMYLAIQAL---------EITPRVIL 115 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 V +++D+V + + L+++ G SS TG GI ++L+ + D Sbjct: 116 V-FTKVDSVHAHGIHINYYALSSKLGVPVVPVSSATGAGIVELLDTIID 163 >gi|71032371|ref|XP_765827.1| hypothetical protein [Theileria parva strain Muguga] gi|68352784|gb|EAN33544.1| hypothetical protein TP01_0300 [Theileria parva] Length = 293 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 52/81 (64%) Query: 2 KFLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRY 61 + +D + + GDGG G +SFRREK + GG +GG+GG GGDV+I+ +++ L F+ Sbjct: 201 RVVDLCVIKVSGGDGGDGCMSFRREKHVPLGGANGGNGGPGGDVYIECNDSVSDLRWFKA 260 Query: 62 QQHFKAQHGEKGMKRNRSGAK 82 + +KAQ+G G NR+G + Sbjct: 261 NKIYKAQNGNNGKGSNRNGVR 281 >gi|311421|emb|CAA43946.1| ORF-3 [Escherichia coli K-12] Length = 72 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 20/39 (51%), Positives = 29/39 (74%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV 201 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVV 44 >gi|124485465|ref|YP_001030081.1| hypothetical protein Mlab_0641 [Methanocorpusculum labreanum Z] gi|124363006|gb|ABN06814.1| small GTP-binding protein [Methanocorpusculum labreanum Z] Length = 340 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 42/189 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYKEFILADIPGI 216 I + G PN GKS+F+ V+ +P+IA YPFTT G++ E K+ D PG+ Sbjct: 157 IVVAGYPNVGKSSFIRLVSSGEPEIASYPFTT----KGVIVGHRNAERRKKIQFIDTPGL 212 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE----LRKK 272 + + +R + + L+++ + + A+ C Y+ E LR++ Sbjct: 213 LDRTEE-----ERNAIEKQALNALVYVADLVLFVIDASENC------GYSFEAQMKLREE 261 Query: 273 IE-IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL--------ECLH 323 IE I+ + I V+ K+++ T G F S+++G G+ ++L E Sbjct: 262 IESIISVPMISVVN-------KSDVKTVEGF--FNMSTVSGEGVDEVLAELLRLREELKV 312 Query: 324 DKIFSIRGE 332 D++ IR E Sbjct: 313 DEVVDIRAE 321 >gi|298291760|ref|YP_003693699.1| GTP-binding proten HflX [Starkeya novella DSM 506] gi|296928271|gb|ADH89080.1| GTP-binding proten HflX [Starkeya novella DSM 506] Length = 463 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 8/164 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +TR+ D F TL P L V+ E IL+D G I + Sbjct: 228 VALVGYTNAGKSTLFNRLTRSDVMAQDLLFATLDPTLRAVQLPSGERIILSDTVGFISDL 287 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIV 276 Q L+ ++LH+ E+ +A + +L +L + + IE+ Sbjct: 288 PTQLVAAFRATLEEVIEADLILHVRDMSHEDAEAQAHDVEAVLSDLDIDPEDDHRVIEV- 346 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQV-PFEFSSITGHGIPQIL 319 ++ID +D + AR N + G P S++TG G+ +L Sbjct: 347 -WNKIDRLDEEGRARLFNTAERREGDARPIPVSALTGEGVDALL 389 >gi|242032241|ref|XP_002463515.1| hypothetical protein SORBIDRAFT_01g001155 [Sorghum bicolor] gi|241917369|gb|EER90513.1| hypothetical protein SORBIDRAFT_01g001155 [Sorghum bicolor] Length = 121 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%) Query: 19 GGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNR 78 G ++FRREK++ + G G G GDV++Q +N+L+ F HF GM + + Sbjct: 49 GVVAFRREKYMLYEG-PSGGNGGRGDVYVQMDGEMNSLLPFCKSVHFCVSCDAHGMGQQQ 107 Query: 79 SGAKGEDVVLTVP 91 GAKGEDVV+ VP Sbjct: 108 VGAKGEDVVVKVP 120 >gi|25145600|ref|NP_741288.1| hypothetical protein T07A9.9 [Caenorhabditis elegans] gi|17367988|sp|O44411|NOG1_CAEEL RecName: Full=Probable nucleolar GTP-binding protein 1 gi|13775470|gb|AAK39281.1| Hypothetical protein T07A9.9a [Caenorhabditis elegans] Length = 681 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 14/178 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ +VTRA ++ Y FTT +G + + + + D PGI+ Sbjct: 174 LCGFPNVGKSSFINNVTRADVEVQPYAFTTKALYVGHLDYRFLRWQVIDTPGILDQP--- 230 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + DR + L H+ +++ + + QC I ++L + S K ++G Sbjct: 231 --LEDRNTIEMQAVTALAHLKASVLFMMDVSEQCDRSIEEQLHLFESIRPLFANKPVLIG 288 Query: 278 LSQIDTVDSDTLARKKNELATQCGQ--VP-FEFSSITGHGIPQILECLHDKIFSIRGE 332 L+++D L +K L Q + +P E S++T G+ + + D++ + R E Sbjct: 289 LNKVDIRHRSDLPPEKAALLDQLEKEGIPIIETSTLTQEGVMGLRDRACDELLAQRVE 346 >gi|308456057|ref|XP_003090501.1| hypothetical protein CRE_14378 [Caenorhabditis remanei] gi|308262960|gb|EFP06913.1| hypothetical protein CRE_14378 [Caenorhabditis remanei] Length = 684 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 14/178 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ +VTRA ++ Y FTT +G + + + + D PGI+ Sbjct: 174 LCGFPNVGKSSFINNVTRADVEVQPYAFTTKALYVGHLDYRFLRWQVIDTPGILDQP--- 230 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + DR + L H+ +++ + + QC I ++L + S K ++G Sbjct: 231 --LEDRNTIEMQAVTALAHLKASVLFMMDVSEQCDRTIEEQLHLFESIRPLFANKPVLIG 288 Query: 278 LSQIDTVDSDTLARKKNELATQCGQ--VPF-EFSSITGHGIPQILECLHDKIFSIRGE 332 L+++D L +K L Q + +P E S++T G+ + + D++ + R E Sbjct: 289 LNKVDIRHRGDLPAEKAALLDQLEKEGIPIVETSTLTQEGVMSLRDRACDELLAQRVE 346 >gi|165977405|ref|YP_001652998.1| GTP-binding protein HflX [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165877506|gb|ABY70554.1| GTP-binding protein HflX [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 357 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 7/114 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T A AD F TL P L ++ + ILAD G I Sbjct: 121 IPTVSLVGYTNAGKSTLFNAITNAGVYAADQLFATLDPTLRRMQIQDVGTTILADTVGFI 180 Query: 218 K-NAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYN 266 + H L+ T +LLH++ A + EN+ A Q +LDE+ A + Sbjct: 181 RFLPHDLVSAFKSTLQETTEASLLLHVIDAADDRKNENIDAVNQ-VLDEIGALD 233 >gi|15921784|ref|NP_377453.1| GTP-binding protein [Sulfolobus tokodaii str. 7] gi|15622571|dbj|BAB66562.1| 334aa long hypothetical GTP-binding protein [Sulfolobus tokodaii str. 7] Length = 334 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 36/56 (64%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I I G PN GKST ++ ++ AKP++A YPFTT ++G + G + + D PGI+ Sbjct: 159 IIIAGPPNVGKSTLVSKISSAKPEVASYPFTTKEIHVGHIDTGIVKIQVIDTPGIL 214 >gi|317138367|ref|XP_001816856.2| GTP-binding protein RBG1 [Aspergillus oryzae RIB40] Length = 368 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 64 VASVGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTTVPGQVLYNGAKIQILDLPGIIQ 123 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 124 GAKDGKGRGRQVIAVAKTCHLIFIVL 149 >gi|170091710|ref|XP_001877077.1| predicted protein [Laccaria bicolor S238N-H82] gi|164648570|gb|EDR12813.1| predicted protein [Laccaria bicolor S238N-H82] Length = 370 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 1/86 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 IA +G +G P+ GKST ++ +T ++++ FTTL G +K + D+PGII+ Sbjct: 64 IASVGFVGFPSVGKSTLMSKLTGTHSEVSEIDFTTLTTVPGTLKVHGAPIQILDLPGIIE 123 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A+ G G G R + RT L+ IV Sbjct: 124 GANDGRGRG-RQVIAVARTCNLIFIV 148 >gi|303250344|ref|ZP_07336543.1| GTP-binding protein hflX [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303251737|ref|ZP_07337908.1| GTP-binding protein hflX [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307249036|ref|ZP_07531044.1| GTP-binding protein HflX [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307253652|ref|ZP_07535519.1| GTP-binding protein HflX [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302649167|gb|EFL79352.1| GTP-binding protein hflX [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650814|gb|EFL80971.1| GTP-binding protein hflX [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306854494|gb|EFM86689.1| GTP-binding protein HflX [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858888|gb|EFM90934.1| GTP-binding protein HflX [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 407 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 7/114 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T A AD F TL P L ++ + ILAD G I Sbjct: 171 IPTVSLVGYTNAGKSTLFNAITNAGVYAADQLFATLDPTLRRMQIQDVGTTILADTVGFI 230 Query: 218 K-NAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYN 266 + H L+ T +LLH++ A + EN+ A Q +LDE+ A + Sbjct: 231 RFLPHDLVSAFKSTLQETTEASLLLHVIDAADDRKNENIDAVNQ-VLDEIGALD 283 >gi|307258067|ref|ZP_07539819.1| GTP-binding protein HflX [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863430|gb|EFM95361.1| GTP-binding protein HflX [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 407 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 7/114 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T A AD F TL P L ++ + ILAD G I Sbjct: 171 IPTVSLVGYTNAGKSTLFNAITNAGVYAADQLFATLDPTLRRMQIQDVGTTILADTVGFI 230 Query: 218 K-NAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYN 266 + H L+ T +LLH++ A + EN+ A Q +LDE+ A + Sbjct: 231 RFLPHDLVSAFKSTLQETTEASLLLHVIDAADDRKNENIDAVNQ-VLDEIGALD 283 >gi|316975352|gb|EFV58797.1| nucleolar GTP-binding protein 1 [Trichinella spiralis] Length = 1130 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 16/162 (9%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+ + +TRA ++ Y FTT +G + Y + + D PGI+ Sbjct: 673 ICGFPNVGKSSLINKLTRADVEVQPYAFTTKSLYVGHMDYKYLRWQVIDTPGILDQP--- 729 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNSELR----KKIEIV 276 + +R + L HI SA+ + + QC + ++++ + S +R K ++ Sbjct: 730 --LEERNTIEMQAITALAHIHSAVVYIMDISEQCHYGLEEQITLFES-IRPLFVNKPVLI 786 Query: 277 GLSQIDTVDSDTLARKKNEL--ATQCGQVP-FEFSSITGHGI 315 GL+++D + + L+ +K +L A + P F S++T GI Sbjct: 787 GLNKVDVLRKEELSEEKLKLLKAVEDAGFPMFSISTVTLEGI 828 >gi|19114877|ref|NP_593965.1| GTPase Ylf2 (predicted) [Schizosaccharomyces pombe 972h-] gi|3183402|sp|O14078|YEAD_SCHPO RecName: Full=Uncharacterized GTP-binding protein UNK4.13c gi|3395559|emb|CAA20143.1| GTPase Ylf2 (predicted) [Schizosaccharomyces pombe] Length = 407 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYP----------NLGIVKEGYK---- 206 IGI+G+PN GKST +T+ A+YPF T+ P ++ E Y+ Sbjct: 48 IGIVGMPNIGKSTLFQILTKTNLGNPANYPFATIDPVHAKAPVLDSQYELLCEIYQPKTR 107 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + + D G+ +N+ +G G+G+ FL + L +V A E Sbjct: 108 IPAQLTIYDTAGLTRNSSKGEGLGNAFLSNIRSVDALFQLVRAFPE 153 >gi|296333313|ref|ZP_06875766.1| GTP-binding protein Era [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675182|ref|YP_003866854.1| GTP-binding protein Era [Bacillus subtilis subsp. spizizenii str. W23] gi|296149511|gb|EFG90407.1| GTP-binding protein Era [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413426|gb|ADM38545.1| GTP-binding protein Era [Bacillus subtilis subsp. spizizenii str. W23] Length = 301 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 21/167 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D P TT G++ G + I D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++L +++A EE + I+++L ++ + + Sbjct: 71 HK---LGDFMMKVAQNTLKEVDLILFMINA-EEGYGKGDEFIIEKLQKMSTPV-----FL 121 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQIL 319 +++ID + D L +E G+ PF+ S++ G+ I +L Sbjct: 122 IVNKIDKIHPDQLLLLIDEYR---GRYPFKEIVPISALEGNNIETLL 165 >gi|255940376|ref|XP_002560957.1| Pc16g06210 [Penicillium chrysogenum Wisconsin 54-1255] gi|211585580|emb|CAP93291.1| Pc16g06210 [Penicillium chrysogenum Wisconsin 54-1255] Length = 394 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 22/136 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST S+T++ A++P+ T+ P V + YK Sbjct: 24 GIVGLANVGKSTLFQSITKSSLGNPANFPYATIDPEEARVIVPDERFDWLCQHYKPKSQV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---E 261 + DI G+ + A GAG+G+ FL H + +V ++ + +D + Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNSFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPCRD 143 Query: 262 LSAYNSELR-KKIEIV 276 L+ N ELR K IE V Sbjct: 144 LTIINEELRIKDIEFV 159 >gi|83764710|dbj|BAE54854.1| unnamed protein product [Aspergillus oryzae] Length = 350 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 57 VASVGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTTVPGQVLYNGAKIQILDLPGIIQ 116 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 117 GAKDGKGRGRQVIAVAKTCHLIFIVL 142 >gi|83589464|ref|YP_429473.1| GTP-binding protein Era [Moorella thermoacetica ATCC 39073] gi|83572378|gb|ABC18930.1| GTP-binding protein Era [Moorella thermoacetica ATCC 39073] Length = 301 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 14/136 (10%) Query: 163 GIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 G+IG PNAGKST L + R ++D P TT LG++ + + D PGI K H Sbjct: 11 GLIGRPNAGKSTLLNRLVGRKVAIMSDKPQTTRNKILGVLTATAYQIVFLDTPGIHKPRH 70 Query: 222 QGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 Q +G+ + T V+L++V A EE A + I+ L + + I+ Sbjct: 71 Q---LGEYMVAVARNTLAEVDVVLYVVDAAEEP-GAGEEYIISRLKEVDVPV-----ILI 121 Query: 278 LSQIDTVDSDTLARKK 293 L+++D V +TL R++ Sbjct: 122 LNKMDLVAGETLIRRE 137 >gi|294659627|ref|XP_462026.2| DEHA2G11110p [Debaryomyces hansenii CBS767] gi|199434111|emb|CAG90510.2| DEHA2G11110p [Debaryomyces hansenii] Length = 416 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYP-------------NLGIVKEGYKE- 207 G++GL N GKSTF ++T+ A+YPF T+ P +LG + E K Sbjct: 42 GVVGLANVGKSTFFQAMTKTSLGTAANYPFATIDPVESLVIVESPKLNHLGQLYESQKNI 101 Query: 208 ---FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+ +NA G G+G++FL + + +V ++ Sbjct: 102 PTILNILDIAGLTRNAASGEGLGNKFLSDIRQVDGIFQVVRGFRDD 147 >gi|16125809|ref|NP_420373.1| GTP-binding protein Era [Caulobacter crescentus CB15] gi|13422951|gb|AAK23541.1| GTP-binding protein Era [Caulobacter crescentus CB15] Length = 333 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 81/193 (41%), Gaps = 33/193 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 IIG PNAGKST + + AK I TT +P G+ EG + +L D PGI Sbjct: 31 AIIGAPNAGKSTLVNRMVGAKVSIVTQKVQTTRFPVRGVAIEGDTQIVLVDTPGIFSPRR 90 Query: 222 QGAGIGDRFLKH-----TERTHVLLHIVSALEENVQAA-------------YQCILDELS 263 + DR + +E +H+V E A Q I++ L Sbjct: 91 R----LDRAMVRAAWAGSEEAEATVHLVDVQAELASRADKATPGEYRSAQDVQTIIEGLK 146 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDT-LARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 A + ++ I+ L++ID + DT LA K+ T F S+ TG G+ E L Sbjct: 147 AADRKV-----ILALNKIDGIKRDTLLAVAKDFFDTGVYSDVFMISASTGAGV----EDL 197 Query: 323 HDKIFSIRGENEF 335 K+ S+ E + Sbjct: 198 TAKLVSMMPEGPW 210 >gi|300123906|emb|CBK25177.2| unnamed protein product [Blastocystis hominis] gi|300174995|emb|CBK20306.2| unnamed protein product [Blastocystis hominis] Length = 406 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 56/113 (49%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKS+ L+ +T K + A Y FTTL G V L D+PGII+ Sbjct: 65 ARVALIGFPSVGKSSLLSHLTDTKSEEAAYEFTTLTCIPGNVYYKGCRIQLLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + + ++L ++ A +E + + + EL L K+ Sbjct: 125 AAYGRGRGRQVIAVAKSADLILMVLDAGKEEEKNHREILERELETVGLRLNKE 177 >gi|157963353|ref|YP_001503387.1| small GTP-binding protein [Shewanella pealeana ATCC 700345] gi|157848353|gb|ABV88852.1| small GTP-binding protein [Shewanella pealeana ATCC 700345] Length = 431 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 4/112 (3%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 ++ + ++G NAGKST +T + AD F TL P L ++ + ILAD G I+ Sbjct: 197 MSTVSLVGYTNAGKSTLFNGLTTSDVYAADQLFATLDPTLRKLELPDGDVILADTVGFIR 256 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY---QCILDELSAYN 266 + H L+ T + +LLH+V + +E + + Q +L E+ A + Sbjct: 257 HLPHDLVAAFKATLQETRQADLLLHVVDSADEKMADNFEQVQKVLKEIDAID 308 >gi|53729027|ref|ZP_00348299.1| COG2262: GTPases [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209416|ref|YP_001054641.1| GTP-binding protein hflX [Actinobacillus pleuropneumoniae L20] gi|126098208|gb|ABN75036.1| GTP-binding protein hflX [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 407 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 7/114 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T A AD F TL P L ++ + ILAD G I Sbjct: 171 IPTVSLVGYTNAGKSTLFNAITNAGVYAADQLFATLDPTLRRMQIQDVGTTILADTVGFI 230 Query: 218 K-NAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYN 266 + H L+ T +LLH++ A + EN+ A Q +LDE+ A + Sbjct: 231 RFLPHDLVSAFKSTLQETTEASLLLHVIDAADDRKNENIDAVNQ-VLDEIGALD 283 >gi|190151319|ref|YP_001969844.1| GTP-binding protein hflX [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264673|ref|ZP_07546253.1| GTP-binding protein HflX [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189916450|gb|ACE62702.1| GTP-binding protein hflX [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306869985|gb|EFN01749.1| GTP-binding protein HflX [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 407 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 7/114 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T A AD F TL P L ++ + ILAD G I Sbjct: 171 IPTVSLVGYTNAGKSTLFNAITNAGVYAADQLFATLDPTLRRMQIQDVGTTILADTVGFI 230 Query: 218 K-NAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYN 266 + H L+ T +LLH++ A + EN+ A Q +LDE+ A + Sbjct: 231 RFLPHDLVSAFKSTLQETTEASLLLHVIDAADDRKNENIDAVNQ-VLDEIGALD 283 >gi|124027285|ref|YP_001012605.1| GTPase [Hyperthermus butylicus DSM 5456] gi|123977979|gb|ABM80260.1| predicted GTPase [Hyperthermus butylicus DSM 5456] Length = 393 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 38/63 (60%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + IIG PN GKS + +T A+ ++ADYPF+T+ P G++ F L D P + ++ Sbjct: 85 AQVAIIGPPNTGKSMLVHKLTGARTRVADYPFSTVNPVPGMLPYKDIYFQLIDTPPLSES 144 Query: 220 AHQ 222 A Q Sbjct: 145 APQ 147 >gi|289191881|ref|YP_003457822.1| small GTP-binding protein [Methanocaldococcus sp. FS406-22] gi|288938331|gb|ADC69086.1| small GTP-binding protein [Methanocaldococcus sp. FS406-22] Length = 367 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 41/85 (48%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G P+ GKST L +T AK ++ Y FTTL G+++ + L D PGII Sbjct: 61 ATAAFVGFPSVGKSTLLNKLTNAKSEVGAYAFTTLTIVPGVMEHKGAKIQLLDAPGIIVG 120 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G L ++L V Sbjct: 121 ASSGKGRGTEVLSAVRSADLILLTV 145 >gi|48477951|ref|YP_023657.1| GTP-binding protein [Picrophilus torridus DSM 9790] gi|48430599|gb|AAT43464.1| GTP-binding protein [Picrophilus torridus DSM 9790] Length = 324 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 4/54 (7%) Query: 166 GLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--VKEGYKEFILADIPGII 217 G+PNAGKS+ ++ +T +PKIA YPFTTL +G K G +FI D PG++ Sbjct: 169 GMPNAGKSSLISKITDVRPKIAPYPFTTLDIIIGYRSFKSGKAQFI--DTPGLL 220 >gi|224010832|ref|XP_002294373.1| hypothetical protein THAPSDRAFT_42652 [Thalassiosira pseudonana CCMP1335] gi|220969868|gb|EED88207.1| hypothetical protein THAPSDRAFT_42652 [Thalassiosira pseudonana CCMP1335] Length = 419 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 54/113 (47%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST S+T + + A Y FTTL G + + + D+PGII+ Sbjct: 65 ARVALIGFPSVGKSTLQGSLTGTESEAAAYEFTTLTCIPGTMHYKGSKVQVLDLPGIIEG 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + +L ++ A +E + + + +EL L ++ Sbjct: 125 AAHGKGRGKEVIACARNADAILIVLDAGKEGLNRHREILENELETVGIRLNQQ 177 >gi|307262465|ref|ZP_07544110.1| GTP-binding protein HflX [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306867842|gb|EFM99673.1| GTP-binding protein HflX [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 396 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 7/114 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T A AD F TL P L ++ + ILAD G I Sbjct: 160 IPTVSLVGYTNAGKSTLFNAITNAGVYAADQLFATLDPTLRRMQIQDVGTTILADTVGFI 219 Query: 218 K-NAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYN 266 + H L+ T +LLH++ A + EN+ A Q +LDE+ A + Sbjct: 220 RFLPHDLVSAFKSTLQETTEASLLLHVIDAADDRKNENIDAVNQ-VLDEIGALD 272 >gi|299133863|ref|ZP_07027057.1| GTP-binding proten HflX [Afipia sp. 1NLS2] gi|298591699|gb|EFI51900.1| GTP-binding proten HflX [Afipia sp. 1NLS2] Length = 464 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 28/185 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFI------LADI 213 + ++G NAGKST +TRA + AD F TL P L +K G K I ++D+ Sbjct: 231 VALVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALKLPHGGKAMISDTVGFISDL 290 Query: 214 PGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQ---CILDELSAYNSELR 270 P ++ A + L+ V+LH+ E+ +A + +L +L+ Sbjct: 291 PTMLVAAFRAT------LEEVIEADVILHVRDISHEDAEAQERDVDQVLRQLNIDTDSGH 344 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP-----FEFSSITGHGIPQILECLHDK 325 + IE+ ++ID + ++ LA + P F S+ TG G+ +LE + ++ Sbjct: 345 RLIEV--WNKIDRFSPE----ERENLARIAARRPPERPCFLVSAETGEGVEALLEAIEER 398 Query: 326 IFSIR 330 + + R Sbjct: 399 LAATR 403 >gi|227827776|ref|YP_002829556.1| small GTP-binding protein [Sulfolobus islandicus M.14.25] gi|229585047|ref|YP_002843549.1| small GTP-binding protein [Sulfolobus islandicus M.16.27] gi|238619948|ref|YP_002914774.1| small GTP-binding protein [Sulfolobus islandicus M.16.4] gi|227459572|gb|ACP38258.1| small GTP-binding protein [Sulfolobus islandicus M.14.25] gi|228020097|gb|ACP55504.1| small GTP-binding protein [Sulfolobus islandicus M.16.27] gi|238381018|gb|ACR42106.1| small GTP-binding protein [Sulfolobus islandicus M.16.4] gi|323474844|gb|ADX85450.1| GTPase, unknown function [Sulfolobus islandicus REY15A] Length = 332 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 92/179 (51%), Gaps = 7/179 (3%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGI 216 ++ I + G PN GKST ++ ++ AKP+IA YPFTT ++G ++ + ++ I+ D PGI Sbjct: 155 ILPTIVVAGPPNVGKSTLVSKISTAKPEIASYPFTTKEVHVGHVILDDFRIQII-DTPGI 213 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS-ELRKKIEI 275 + +R K T L I+ + ++ ++ + ++ + +L KK+ I Sbjct: 214 LDRPEIERNNIER--KATNAIRNLNGIIIFMFDSSISSVLSVESQIELFREVKLLKKVII 271 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 +++ID D D +K + ++ G +E S+ G G+ ++ E L I S G NE Sbjct: 272 PVINKIDEKD-DEYYKKIVDFLSKEGSKWYEISAEKGIGLDKLKEELFSLIKS-SGTNE 328 >gi|307251235|ref|ZP_07533156.1| GTP-binding protein HflX [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306856751|gb|EFM88886.1| GTP-binding protein HflX [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 396 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 7/114 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T A AD F TL P L ++ + ILAD G I Sbjct: 160 IPTVSLVGYTNAGKSTLFNAITNAGVYAADQLFATLDPTLRRMQIQDVGTTILADTVGFI 219 Query: 218 K-NAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYN 266 + H L+ T +LLH++ A + EN+ A Q +LDE+ A + Sbjct: 220 RFLPHDLVSAFKSTLQETTEASLLLHVIDAADDRKNENIDAVNQ-VLDEIGALD 272 >gi|148255461|ref|YP_001240046.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. BTAi1] gi|146407634|gb|ABQ36140.1| GTP-binding protein HflX [Bradyrhizobium sp. BTAi1] Length = 459 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 16/179 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST +TRA + AD F TL P L + + + +L+D G I N Sbjct: 228 VALVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRAITLPHGGKAMLSDTVGFISNL 287 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIV 276 Q L+ V+LH+ E+ +A + +L +L IE+ Sbjct: 288 PTQLVAAFRATLEEVLEADVILHVRDMSHEDAEAQQHDVELVLGQLGIDPEATDTIIEV- 346 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE-----FSSITGHGIPQILECLHDKIFSIR 330 ++ID +D A ++N LA + P E S+ TG G+ +L+ + D++ + R Sbjct: 347 -WNKIDRLDE---AAREN-LANIASRRPPERPCLLVSAHTGEGVDALLQAIEDRLAAAR 400 >gi|299747491|ref|XP_002911177.1| developmentally regulated GTP binding protein 1 [Coprinopsis cinerea okayama7#130] gi|298407543|gb|EFI27683.1| developmentally regulated GTP binding protein 1 [Coprinopsis cinerea okayama7#130] Length = 368 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 IA +G +G P+ GKST ++ +T + +D FTTL G +K + D+PGII+ Sbjct: 63 IASVGFVGFPSVGKSTLMSKLTGTHSEASDIDFTTLTTVPGTLKVHGAPIQILDLPGIIE 122 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A+ G G G + + RT L+ IV Sbjct: 123 GANDGRGRGRQVIA-VARTCNLIFIV 147 >gi|115389492|ref|XP_001212251.1| hypothetical protein ATEG_03073 [Aspergillus terreus NIH2624] gi|114194647|gb|EAU36347.1| hypothetical protein ATEG_03073 [Aspergillus terreus NIH2624] Length = 361 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 45/85 (52%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ Sbjct: 58 ASVGFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTTVPGQVMYNGAKIQILDLPGIIQG 117 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 118 AKDGKGRGRQVIAVAKTCHLIFIVL 142 >gi|19173454|ref|NP_597257.1| DEVELOPMENTALLY REGULATED GTP BINDING PROTEIN [Encephalitozoon cuniculi GB-M1] gi|19171043|emb|CAD26433.1| DEVELOPMENTALLY REGULATED GTP BINDING PROTEIN [Encephalitozoon cuniculi GB-M1] Length = 362 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 3/120 (2%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IGLP+ GKST L+ +T K A++ FTTL G + + D+PGI+ Sbjct: 62 ARVVLIGLPSVGKSTLLSKITSTHSKAAEHEFTTLECISGKMHLNDTWIQVLDLPGIVSG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A Q G G + + ++L + L+ + + DEL L K+ V L+ Sbjct: 122 ASQNRGRGRQVISIARTADLILMV---LDPRRHEDRRILEDELHEMGIRLNKRKPDVSLT 178 >gi|325116255|emb|CBZ51808.1| conserved hypothetical protein [Neospora caninum Liverpool] Length = 1393 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 22/43 (51%), Positives = 27/43 (62%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDV 45 F + +G GG G +SFRREK + GGPDG GG+GGDV Sbjct: 140 FFPPKTITAAAGSGGEGCVSFRREKSLPKGGPDGAPGGKGGDV 182 >gi|269792146|ref|YP_003317050.1| GTP-binding protein YchF [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099781|gb|ACZ18768.1| GTP-binding protein YchF [Thermanaerovibrio acidaminovorans DSM 6589] Length = 363 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 17/99 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GIIGLP +GK+T +TRA ++ Y PN +V K Sbjct: 5 GIIGLPLSGKTTIFNVITRAGAEVKPYAGGKTDPNRAVVPVPDRRFDALAEHHNPKKRTP 64 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + D+ G+ ++A +GAG+G+ FL LLH+V Sbjct: 65 AQVEFVDLAGLSRDASKGAGLGNSFLSFVAEADALLHVV 103 >gi|229581942|ref|YP_002840341.1| small GTP-binding protein [Sulfolobus islandicus Y.N.15.51] gi|228012658|gb|ACP48419.1| small GTP-binding protein [Sulfolobus islandicus Y.N.15.51] Length = 332 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 92/179 (51%), Gaps = 7/179 (3%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGI 216 ++ I + G PN GKST ++ ++ AKP+IA YPFTT ++G ++ + ++ I+ D PGI Sbjct: 155 ILPTIVVAGPPNVGKSTLVSKISTAKPEIASYPFTTKEVHVGHVILDDFRIQII-DTPGI 213 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS-ELRKKIEI 275 + +R K T L I+ + ++ ++ + ++ + +L KK+ I Sbjct: 214 LDRPEIERNNIER--KATNAIRNLNGIIIFMFDSSISSILSVESQIELFREVKLLKKVII 271 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 +++ID D D +K + ++ G +E S+ G G+ ++ E L I S G NE Sbjct: 272 PVINKIDEKD-DEYYKKIVDFLSKEGSKWYEISAEKGIGLDKLKEELFSLIKS-SGTNE 328 >gi|74831330|emb|CAI39284.1| drg_B81 [Paramecium tetraurelia] Length = 376 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 55/122 (45%), Gaps = 15/122 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-----------IL 210 IG+IG P+ GKST L +T KIA Y FTTL L Y F L Sbjct: 66 IGMIGFPSVGKSTLLTKLTGVFSKIAAYEFTTL--TLHTWSRDYSIFQQVLQHKGAKIQL 123 Query: 211 ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR 270 D+PGII+ A G G G + + +++L ++ A V + I EL + L Sbjct: 124 LDLPGIIEGAKDGKGRGKQVIAVARTCNLILIVLDATRPMVHK--KIIERELEGFGIRLN 181 Query: 271 KK 272 K+ Sbjct: 182 KQ 183 >gi|147677262|ref|YP_001211477.1| GTP-dependent nucleic acid-binding protein EngD [Pelotomaculum thermopropionicum SI] gi|146273359|dbj|BAF59108.1| predicted GTPase, probable translation factor [Pelotomaculum thermopropionicum SI] Length = 364 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 17/102 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-----------------EGY 205 G+IGLP GK+T +T ++ + + + N G+ K Y Sbjct: 6 GLIGLPMVGKTTIFNLLTGSRAETSYFYTGKAETNTGVAKVPDRRVDYLSRMYRPRKTTY 65 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 + +D+PG+++ A QG GIG++FL +L HIV + Sbjct: 66 AQIQFSDVPGLVRGASQGVGIGNQFLSAVRNVDMLAHIVRSF 107 >gi|227830486|ref|YP_002832266.1| small GTP-binding protein [Sulfolobus islandicus L.S.2.15] gi|229579298|ref|YP_002837696.1| small GTP-binding protein [Sulfolobus islandicus Y.G.57.14] gi|284997980|ref|YP_003419747.1| small GTP-binding protein [Sulfolobus islandicus L.D.8.5] gi|227456934|gb|ACP35621.1| small GTP-binding protein [Sulfolobus islandicus L.S.2.15] gi|228010012|gb|ACP45774.1| small GTP-binding protein [Sulfolobus islandicus Y.G.57.14] gi|284445875|gb|ADB87377.1| small GTP-binding protein [Sulfolobus islandicus L.D.8.5] Length = 332 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 91/174 (52%), Gaps = 10/174 (5%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGI 216 ++ I + G PN GKST ++ ++ AKP+IA YPFTT ++G ++ + ++ I+ D PGI Sbjct: 155 ILPTIVVAGPPNVGKSTLVSKISTAKPEIASYPFTTKEVHVGHVILDDFRIQII-DTPGI 213 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS-ELRKKIEI 275 + +R K T L I+ + ++ ++ + ++ + +L KK+ I Sbjct: 214 LDRPEIERNNIER--KATNAIRNLNGIIIFMFDSSISSILSVESQIELFREVKLLKKVII 271 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 +++ID D D +K + ++ G +E S+ G G L+ L +++FS+ Sbjct: 272 PVINKIDEKD-DEYYKKIVDFLSKEGSKWYEISAEKGIG----LDKLKEELFSL 320 >gi|260940567|ref|XP_002614583.1| hypothetical protein CLUG_05361 [Clavispora lusitaniae ATCC 42720] gi|238851769|gb|EEQ41233.1| hypothetical protein CLUG_05361 [Clavispora lusitaniae ATCC 42720] Length = 439 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLG-IVKEGYK-------------- 206 G++GL N GKSTF ++T++ A+YP+ T+ P +V E K Sbjct: 66 GVVGLANVGKSTFFQAITKSTLGNPANYPYATIDPEQSQVVVESPKLDHLQQLYGSEKKV 125 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+ +NA G G+G++FL + H+V ++ Sbjct: 126 PTSLTIYDIAGLTRNAASGEGLGNKFLADIRSVDGIFHVVRGFRDD 171 >gi|240139575|ref|YP_002964051.1| putative GTPase (HflX) [Methylobacterium extorquens AM1] gi|240009548|gb|ACS40774.1| putative GTPase (HflX) [Methylobacterium extorquens AM1] Length = 471 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 10/177 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNA 220 + ++G NAGKST ++T+A+ + D F TL P K + E IL+D G I + Sbjct: 231 VALVGYTNAGKSTLFNALTKAEVRAQDMLFATLDPTARATKLPHGETVILSDTVGFISDL 290 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIV 276 R L+ +LLH+ + QA + +L EL ++ + IE+ Sbjct: 291 PTSLIAAFRATLEDVIEADILLHVRDVSHGDTQAQADDVEGVLREL-GIEADAERIIEV- 348 Query: 277 GLSQIDTVDSDTLARKKNELATQ--CGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 ++ D +D R N A G P S++TG G+P++ E + ++ R Sbjct: 349 -WNKADLLDEGERTRLLNLSAAHRGAGPAPILVSALTGEGLPELTERIEGQVARARS 404 >gi|115632092|ref|XP_001203238.1| PREDICTED: similar to GA10450-PA, partial [Strongylocentrotus purpuratus] gi|115644732|ref|XP_798569.2| PREDICTED: similar to GA10450-PA, partial [Strongylocentrotus purpuratus] Length = 60 Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 19/35 (54%), Positives = 28/35 (80%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 +AD+PG+I+ +HQ G+G RFL+H ERT +LL +V Sbjct: 1 MADLPGLIEGSHQNMGMGHRFLRHVERTKLLLFVV 35 >gi|145615643|ref|XP_360356.2| GTP binding protein [Magnaporthe oryzae 70-15] gi|145022435|gb|EDK06455.1| GTP binding protein [Magnaporthe oryzae 70-15] Length = 353 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 45/86 (52%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A IG IG P+ GKST ++ +T + A Y FTTL G V + D+PGII+ Sbjct: 49 VASIGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTSVPGQVIYNGAPLQIIDLPGIIE 108 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + + H++ ++ Sbjct: 109 GAKDGRGRGRQVIAVAKTCHLIFIVL 134 >gi|158518695|gb|AAB67829.2| developmentally regulated GTP binding protein [Pisum sativum] Length = 399 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 2/111 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L +T + A Y FTTL GI+ + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTLLTLLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIEGAS 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 +G G G + + + + ++L ++ A + Q + EL A L K+ Sbjct: 125 EGKGRGRQVIAVAKSSDIVLMVLDA--SKSEGHRQILTKELEAVGLRLNKR 173 >gi|307246900|ref|ZP_07528965.1| GTP-binding protein HflX [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255882|ref|ZP_07537683.1| GTP-binding protein HflX [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260335|ref|ZP_07542042.1| GTP-binding protein HflX [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852185|gb|EFM84425.1| GTP-binding protein HflX [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861150|gb|EFM93143.1| GTP-binding protein HflX [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865586|gb|EFM97467.1| GTP-binding protein HflX [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 405 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 7/112 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T A AD F TL P L ++ + ILAD G I Sbjct: 169 IPTVSLVGYTNAGKSTLFNAITNAGVYAADQLFATLDPTLRRMQIQDVGTTILADTVGFI 228 Query: 218 K-NAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSA 264 + H L+ T +LLH++ A + EN+ A Q +LDE+ A Sbjct: 229 RFLPHDLVSAFKSTLQETTEASLLLHVIDAADDRKNENIDAVNQ-VLDEIGA 279 >gi|329851294|ref|ZP_08266051.1| GTP-dependent nucleic acid-binding protein engD [Asticcacaulis biprosthecum C19] gi|328840140|gb|EGF89712.1| GTP-dependent nucleic acid-binding protein engD [Asticcacaulis biprosthecum C19] Length = 370 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 18/90 (20%) Query: 162 IGIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEF 208 + I+GLPN GKST F A A + A+YPF T+ PN+G V G KE Sbjct: 5 VAIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGDVAVPEPRLEVLAKIAGSKEI 64 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKH 233 I A D+ G+++ A +G G+G++FL + Sbjct: 65 IPARINFVDVAGLVRGASKGEGLGNQFLAN 94 >gi|323477584|gb|ADX82822.1| small GTP-binding protein [Sulfolobus islandicus HVE10/4] Length = 332 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 92/179 (51%), Gaps = 7/179 (3%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGI 216 ++ I + G PN GKST ++ ++ AKP+IA YPFTT ++G ++ + ++ I+ D PGI Sbjct: 155 ILPTIVVAGPPNVGKSTLVSKISTAKPEIASYPFTTKEVHVGHVILDDFRIQII-DTPGI 213 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS-ELRKKIEI 275 + +R K T L I+ + ++ ++ + ++ + +L KK+ I Sbjct: 214 LDRPEIERNNIER--KATNAIRNLNGIIIFMFDSSISSVLSVESQIELFREVKLFKKVII 271 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 +++ID D D +K + ++ G +E S+ G G+ ++ E L I S G NE Sbjct: 272 PVINKIDEKD-DEYYKKIVDFLSKEGSKWYEISAEKGIGLDKLKEELFSLIKS-SGTNE 328 >gi|256060790|ref|ZP_05450952.1| GTP-binding protein Era [Brucella neotomae 5K33] gi|261324781|ref|ZP_05963978.1| GTP-binding protein era [Brucella neotomae 5K33] gi|261300761|gb|EEY04258.1| GTP-binding protein era [Brucella neotomae 5K33] Length = 311 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 35/181 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST + + K I + TT GI EG + +L D PGI + Sbjct: 22 VALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPAQIVLVDTPGIFRPK 81 Query: 221 HQGAGIGDRFLKHT-----ERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKK 272 + DR + T + ++L I+ A EN +A + + D +R+K Sbjct: 82 RR----LDRAMVTTAWGGAKDADIILVIIDAQGGFNENAEALLESMKD--------VRQK 129 Query: 273 IEIVGLSQIDTVDSD---TLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHDK 325 +++ L+++D VD +LA+K NEL VPF+ S++ G G + + L + Sbjct: 130 -KVLVLNKVDRVDPPVLLSLAQKANEL------VPFDRTFMISALNGSGCKDLAKYLAES 182 Query: 326 I 326 + Sbjct: 183 V 183 >gi|163852243|ref|YP_001640286.1| GTP-binding proten HflX [Methylobacterium extorquens PA1] gi|218531002|ref|YP_002421818.1| GTP-binding proten HflX [Methylobacterium chloromethanicum CM4] gi|163663848|gb|ABY31215.1| GTP-binding proten HflX [Methylobacterium extorquens PA1] gi|218523305|gb|ACK83890.1| GTP-binding proten HflX [Methylobacterium chloromethanicum CM4] Length = 471 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 10/177 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNA 220 + ++G NAGKST ++T+A+ + D F TL P K + E IL+D G I + Sbjct: 231 VALVGYTNAGKSTLFNALTKAEVRAQDMLFATLDPTARATKLPHGETVILSDTVGFISDL 290 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIV 276 R L+ +LLH+ + QA + +L EL ++ + IE+ Sbjct: 291 PTSLIAAFRATLEDVIEADILLHVRDVSHGDTQAQAEDVEGVLREL-GIEADAERIIEV- 348 Query: 277 GLSQIDTVDSDTLARKKNELATQ--CGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 ++ D +D R N A G P S++TG G+P++ E + ++ R Sbjct: 349 -WNKADLLDEGERTRLLNLSAAHRGAGPAPILVSALTGEGLPELTERIEGQVARARS 404 >gi|50545659|ref|XP_500368.1| YALI0B00990p [Yarrowia lipolytica] gi|49646234|emb|CAG82582.1| YALI0B00990p [Yarrowia lipolytica] Length = 641 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 15/182 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL SVTRA+ ++ Y FTT +G Y F D PGI+ + Sbjct: 172 ICGYPNVGKSSFLKSVTRAEVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDRPTEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + + HI S + + + QC + +++ ++S K IV Sbjct: 232 MNNIE-----MQSIYAIAHIRSCVLYFMDVSEQCGFSVAEQVKLFHSIKPLFANKQVIVV 286 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLH---DKIFSIRGEN 333 +++ID + L + EL P E ++ H ++E + +K+ + R E Sbjct: 287 INKIDVKRPEDLDEENQELLKGIAAQPDVEIMQLSCHAEEGLMEVRNRACEKLLAARVEQ 346 Query: 334 EF 335 + Sbjct: 347 KL 348 >gi|116335033|ref|YP_802528.1| putative GTPase [Candidatus Carsonella ruddii PV] gi|116235314|dbj|BAF35162.1| putative GTPase [Candidatus Carsonella ruddii PV] Length = 254 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 13/103 (12%) Query: 9 VYIRSGDGGAGGISF---RREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHF 65 +YI+SGDGG G ISF R + F P+GG+GG GGDV++ +N + Y Sbjct: 7 IYIKSGDGGNGLISFLKIRNKIF-----PNGGNGGNGGDVYLNCNNNTKIISKINYS--- 58 Query: 66 KAQHGEKGMKRNRSGAKGEDVVLTVPVGTQV-FEEDGISLICD 107 A++G+ G + R G G+ +++ P+G+ + E I L+C+ Sbjct: 59 -AENGKTGKNKIRHGKTGQSLIIKFPIGSYIEIENYKIYLVCN 100 >gi|62289623|ref|YP_221416.1| GTP-binding protein Era [Brucella abortus bv. 1 str. 9-941] gi|82699551|ref|YP_414125.1| GTP-binding protein Era [Brucella melitensis biovar Abortus 2308] gi|189023876|ref|YP_001934644.1| GTP-binding protein Era [Brucella abortus S19] gi|237815118|ref|ZP_04594116.1| GTP-binding protein Era [Brucella abortus str. 2308 A] gi|254688938|ref|ZP_05152192.1| GTP-binding protein Era [Brucella abortus bv. 6 str. 870] gi|254693420|ref|ZP_05155248.1| GTP-binding protein Era [Brucella abortus bv. 3 str. Tulya] gi|254697073|ref|ZP_05158901.1| GTP-binding protein Era [Brucella abortus bv. 2 str. 86/8/59] gi|254729969|ref|ZP_05188547.1| GTP-binding protein Era [Brucella abortus bv. 4 str. 292] gi|256257186|ref|ZP_05462722.1| GTP-binding protein Era [Brucella abortus bv. 9 str. C68] gi|260545622|ref|ZP_05821363.1| GTP-binding protein Era [Brucella abortus NCTC 8038] gi|260754425|ref|ZP_05866773.1| GTP-binding protein era [Brucella abortus bv. 6 str. 870] gi|260757644|ref|ZP_05869992.1| GTP-binding protein era [Brucella abortus bv. 4 str. 292] gi|260761471|ref|ZP_05873814.1| GTP-binding protein era [Brucella abortus bv. 2 str. 86/8/59] gi|260883453|ref|ZP_05895067.1| GTP-binding protein era [Brucella abortus bv. 9 str. C68] gi|261213671|ref|ZP_05927952.1| GTP-binding protein era [Brucella abortus bv. 3 str. Tulya] gi|297248034|ref|ZP_06931752.1| GTP-binding protein Era [Brucella abortus bv. 5 str. B3196] gi|62195755|gb|AAX74055.1| Era, GTP-binding protein Era [Brucella abortus bv. 1 str. 9-941] gi|82615652|emb|CAJ10639.1| Serpin:Elongation factor, GTP-binding:ATP/GTP-binding site motif A (P-loop):Type 2 KH domain:Small GTP-binding protein domain [Brucella melitensis biovar Abortus 2308] gi|189019448|gb|ACD72170.1| GTP-binding protein Era [Brucella abortus S19] gi|237789955|gb|EEP64165.1| GTP-binding protein Era [Brucella abortus str. 2308 A] gi|260097029|gb|EEW80904.1| GTP-binding protein Era [Brucella abortus NCTC 8038] gi|260667962|gb|EEX54902.1| GTP-binding protein era [Brucella abortus bv. 4 str. 292] gi|260671903|gb|EEX58724.1| GTP-binding protein era [Brucella abortus bv. 2 str. 86/8/59] gi|260674533|gb|EEX61354.1| GTP-binding protein era [Brucella abortus bv. 6 str. 870] gi|260872981|gb|EEX80050.1| GTP-binding protein era [Brucella abortus bv. 9 str. C68] gi|260915278|gb|EEX82139.1| GTP-binding protein era [Brucella abortus bv. 3 str. Tulya] gi|297175203|gb|EFH34550.1| GTP-binding protein Era [Brucella abortus bv. 5 str. B3196] Length = 311 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 35/181 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST + + K I + TT GI EG + +L D PGI + Sbjct: 22 VALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPAQIVLVDTPGIFRPK 81 Query: 221 HQGAGIGDRFLKHT-----ERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKK 272 + DR + T + ++L I+ A EN +A + + D +R+K Sbjct: 82 RR----LDRAMVTTAWGGAKDADIILVIIDAQGGFNENAEALLESMKD--------IRQK 129 Query: 273 IEIVGLSQIDTVDSD---TLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHDK 325 +++ L+++D VD +LA+K NEL VPF+ S++ G G + + L + Sbjct: 130 -KVLVLNKVDRVDPPVLLSLAQKANEL------VPFDRTFMISALNGSGCKDLAKYLAES 182 Query: 326 I 326 + Sbjct: 183 V 183 >gi|296424995|ref|XP_002842029.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638286|emb|CAZ86220.1| unnamed protein product [Tuber melanosporum] Length = 651 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 15/182 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL SVTRA + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLKSVTRADVDVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ S + V + QC I ++ ++S KI + Sbjct: 232 MNTIE-----MQSITAIAHLRSVVLYFVDLSEQCGYTIEAQVQLFHSIKPLFANKIVFLV 286 Query: 278 LSQIDTVDSDTLARKKNELA---TQCGQVP-FEFSSITGHGIPQILECLHDKIFSIRGEN 333 +++ID V + L + EL T+ G+V + S T G+ + +++ ++R E Sbjct: 287 VNKIDVVRPEDLDPARLELLETITKSGEVEMLKLSCHTEEGVMDVRNQACERLLALRVEQ 346 Query: 334 EF 335 + Sbjct: 347 KL 348 >gi|283778802|ref|YP_003369557.1| GTP-binding protein HSR1-like protein [Pirellula staleyi DSM 6068] gi|283437255|gb|ADB15697.1| GTP-binding protein HSR1-related protein [Pirellula staleyi DSM 6068] Length = 331 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 27/55 (49%), Positives = 33/55 (60%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + IIG PN+GKS LAS+TRA P+IA YPFTT G++ L D P I Sbjct: 84 VVIIGGPNSGKSQLLASLTRAAPEIAPYPFTTREVQPGMMAWEDISVQLLDTPPI 138 >gi|254561989|ref|YP_003069084.1| GTPase [Methylobacterium extorquens DM4] gi|254269267|emb|CAX25233.1| putative GTPase (HflX) [Methylobacterium extorquens DM4] Length = 471 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 10/177 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNA 220 + ++G NAGKST ++T+A+ + D F TL P K + E IL+D G I + Sbjct: 231 VALVGYTNAGKSTLFNALTKAEVRAQDMLFATLDPTARATKLPHGETVILSDTVGFISDL 290 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIV 276 R L+ +LLH+ + QA + +L EL ++ + IE+ Sbjct: 291 PTSLIAAFRATLEDVIEADILLHVRDVSHGDTQAQAEDVEGVLREL-GIEADAERIIEV- 348 Query: 277 GLSQIDTVDSDTLARKKNELATQ--CGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 ++ D +D R N A G P S++TG G+P++ E + ++ R Sbjct: 349 -WNKADLLDEGERTRLLNLSAAHRGAGPAPILVSALTGEGLPELTERIEGQVARARS 404 >gi|257068243|ref|YP_003154498.1| GTP-binding proten HflX [Brachybacterium faecium DSM 4810] gi|256559061|gb|ACU84908.1| GTP-binding proten HflX [Brachybacterium faecium DSM 4810] Length = 521 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 21/173 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGIIKN 219 + I G NAGKS+ L +T A + + F TL P + +G +EF AD G ++ Sbjct: 306 VAIAGYTNAGKSSLLNRLTGAGVLVENALFATLDPTVRRSTTPDG-REFTYADTVGFVR- 363 Query: 220 AHQGAGIGDRFLKHTER---THVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKI 273 H + + F E +LLH+V A + + A + +L EL ++ Sbjct: 364 -HLPTQLVEAFRSTLEEVGGADLLLHVVDASHPDPEGQITAVRAVLGELEGFDVP----- 417 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EIV L++ D + +T+AR L +Q G S+ TG GI ++ E + +++ Sbjct: 418 EIVVLNKADIAEPETIAR----LRSQVGDSAV-VSARTGMGIQELRELIAERL 465 >gi|15669516|ref|NP_248326.1| GTP1/Obg family GTP-binding protein [Methanocaldococcus jannaschii DSM 2661] gi|38503291|sp|Q58722|Y1326_METJA RecName: Full=Uncharacterized GTP-binding protein MJ1326 gi|1591967|gb|AAB99336.1| GTP-binding protein, member of GTP1/OBG-family [Methanocaldococcus jannaschii DSM 2661] Length = 391 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 41/85 (48%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G P+ GKST L +T AK ++ Y FTTL GI++ + L D PGII Sbjct: 85 ATAAFVGFPSVGKSTLLNKLTNAKSEVGAYAFTTLTIVPGILEYKGAKIQLLDAPGIIVG 144 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G L ++L V Sbjct: 145 ASSGKGRGTEVLSAVRSADLILLTV 169 >gi|332198326|gb|AEE36447.1| putative GTP-binding protein [Arabidopsis thaliana] Length = 355 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 5/86 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G PN GKS+ + ++ KP+I +YPFTT +G + Y+ F + D PG+++ Sbjct: 160 LCLVGAPNVGKSSLVRILSTGKPEICNYPFTTRGILMGHIVLNYQRFQVTDTPGLLRRCD 219 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSAL 247 + DR VL H+ +A+ Sbjct: 220 E-----DRNNLEKLTLAVLTHLPTAV 240 >gi|94971366|ref|YP_593414.1| GTP-binding protein, HSR1-related [Candidatus Koribacter versatilis Ellin345] gi|94553416|gb|ABF43340.1| GTP-binding protein, HSR1-related protein [Candidatus Koribacter versatilis Ellin345] Length = 451 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 20/175 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 +A + ++G NAGKST ++T+A + F TL P L G++ ++ +L+D G I Sbjct: 232 VAVVALVGYTNAGKSTLFNALTKAGVYASSKMFATLDPTLRGVMLPSKRQVLLSDTVGFI 291 Query: 218 KNAHQGAGIGDR-FLKHTERTHVLLHIVS-----ALEENVQAAYQCILDELSAYNSELRK 271 +N R L+ +R +LLH+ ALE+ Q + +L EL E++ Sbjct: 292 RNLPTTLVSAFRATLEEVQRAALLLHVADATSPVALEQQRQ--VEDVLGEL-----EVQD 344 Query: 272 KIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 K +I +++I D LA K G+V S+ +G G+ +L + + I Sbjct: 345 KPQIHVMNKI-----DLLATSKRAALINSGKV-VHVSAKSGLGMEALLHAIDEAI 393 >gi|298291622|ref|YP_003693561.1| GTP-binding protein Era [Starkeya novella DSM 506] gi|296928133|gb|ADH88942.1| GTP-binding protein Era [Starkeya novella DSM 506] Length = 304 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 37/178 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI---- 216 + +IG PNAGKST ++ K I + TT GI EG + IL D PGI Sbjct: 13 VALIGAPNAGKSTLTNALVGTKVSIVSHKVQTTRSLVRGIALEGTTQIILVDTPGIFAPK 72 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 +++A GAG D + +L+ + + E+V+A + + D Sbjct: 73 RRLEKAMVRSAWSGAGDADAVV-------LLVDARAGMTEDVEAIIKGLADV-------- 117 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQV-----PFEFSSITGHGIPQILECL 322 K+ + L++ID V D+L ELA + ++ F S+ G G+ ++ E L Sbjct: 118 -KRPRAILLNKIDLVKRDSLL----ELAAKVAELISFDRLFMVSAQNGDGLKELREWL 170 >gi|254718803|ref|ZP_05180614.1| GTP-binding protein Era [Brucella sp. 83/13] gi|265983785|ref|ZP_06096520.1| GTP-binding protein era [Brucella sp. 83/13] gi|306837523|ref|ZP_07470398.1| GTP-binding protein Era [Brucella sp. NF 2653] gi|306845264|ref|ZP_07477840.1| GTP-binding protein Era [Brucella sp. BO1] gi|264662377|gb|EEZ32638.1| GTP-binding protein era [Brucella sp. 83/13] gi|306274423|gb|EFM56230.1| GTP-binding protein Era [Brucella sp. BO1] gi|306407415|gb|EFM63619.1| GTP-binding protein Era [Brucella sp. NF 2653] Length = 311 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 35/181 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST + + K I + TT GI EG + +L D PGI + Sbjct: 22 VALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPAQIVLVDTPGIFRPK 81 Query: 221 HQGAGIGDRFLKHT-----ERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKK 272 + DR + T + ++L I+ A EN +A + + D +R+K Sbjct: 82 RR----LDRAMVTTAWGGAKDADIILVIIDAQGGFNENAEALLESMKD--------VRQK 129 Query: 273 IEIVGLSQIDTVDSD---TLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHDK 325 +++ L+++D VD +LA+K NEL VPF+ S++ G G + + L + Sbjct: 130 -KVLVLNKVDRVDPPVLLSLAQKANEL------VPFDRTFMISALNGSGCKDLAKYLAES 182 Query: 326 I 326 + Sbjct: 183 V 183 >gi|198433570|ref|XP_002131883.1| PREDICTED: similar to Developmentally regulated GTP binding protein 2 [Ciona intestinalis] Length = 364 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 2/113 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L+++T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALVGFPSVGKSTLLSTLTSTTSECASYEFTTLTCIPGVIEHNGASIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + +++ ++ AL+ ++Q + + EL A L KK Sbjct: 123 AAAGKGRGRQVISVARTADIVVMMLDALKGDIQK--ELLTKELEAVGIRLNKK 173 >gi|148560637|ref|YP_001258647.1| GTP-binding protein Era [Brucella ovis ATCC 25840] gi|225627161|ref|ZP_03785199.1| GTP-binding protein Era [Brucella ceti str. Cudo] gi|225852184|ref|YP_002732417.1| GTP-binding protein Era [Brucella melitensis ATCC 23457] gi|254701450|ref|ZP_05163278.1| GTP-binding protein Era [Brucella suis bv. 5 str. 513] gi|254707630|ref|ZP_05169458.1| GTP-binding protein Era [Brucella pinnipedialis M163/99/10] gi|254709788|ref|ZP_05171599.1| GTP-binding protein Era [Brucella pinnipedialis B2/94] gi|254713790|ref|ZP_05175601.1| GTP-binding protein Era [Brucella ceti M644/93/1] gi|254717153|ref|ZP_05178964.1| GTP-binding protein Era [Brucella ceti M13/05/1] gi|256031278|ref|ZP_05444892.1| GTP-binding protein Era [Brucella pinnipedialis M292/94/1] gi|256113202|ref|ZP_05454070.1| GTP-binding protein Era [Brucella melitensis bv. 3 str. Ether] gi|256159388|ref|ZP_05457170.1| GTP-binding protein Era [Brucella ceti M490/95/1] gi|256254686|ref|ZP_05460222.1| GTP-binding protein Era [Brucella ceti B1/94] gi|256264306|ref|ZP_05466838.1| GTP-binding protein Era [Brucella melitensis bv. 2 str. 63/9] gi|260168416|ref|ZP_05755227.1| GTP-binding protein Era [Brucella sp. F5/99] gi|261218968|ref|ZP_05933249.1| GTP-binding protein era [Brucella ceti M13/05/1] gi|261221864|ref|ZP_05936145.1| GTP-binding protein era [Brucella ceti B1/94] gi|261315122|ref|ZP_05954319.1| GTP-binding protein era [Brucella pinnipedialis M163/99/10] gi|261317323|ref|ZP_05956520.1| GTP-binding protein era [Brucella pinnipedialis B2/94] gi|261321533|ref|ZP_05960730.1| GTP-binding protein era [Brucella ceti M644/93/1] gi|261751990|ref|ZP_05995699.1| GTP-binding protein era [Brucella suis bv. 5 str. 513] gi|261757877|ref|ZP_06001586.1| GTP-binding protein Era [Brucella sp. F5/99] gi|265988361|ref|ZP_06100918.1| GTP-binding protein era [Brucella pinnipedialis M292/94/1] gi|265994610|ref|ZP_06107167.1| GTP-binding protein era [Brucella melitensis bv. 3 str. Ether] gi|265997828|ref|ZP_06110385.1| GTP-binding protein era [Brucella ceti M490/95/1] gi|294852026|ref|ZP_06792699.1| GTP-binding protein Era [Brucella sp. NVSL 07-0026] gi|148371894|gb|ABQ61873.1| GTP-binding protein Era [Brucella ovis ATCC 25840] gi|225617996|gb|EEH15040.1| GTP-binding protein Era [Brucella ceti str. Cudo] gi|225640549|gb|ACO00463.1| GTP-binding protein Era [Brucella melitensis ATCC 23457] gi|260920448|gb|EEX87101.1| GTP-binding protein era [Brucella ceti B1/94] gi|260924057|gb|EEX90625.1| GTP-binding protein era [Brucella ceti M13/05/1] gi|261294223|gb|EEX97719.1| GTP-binding protein era [Brucella ceti M644/93/1] gi|261296546|gb|EEY00043.1| GTP-binding protein era [Brucella pinnipedialis B2/94] gi|261304148|gb|EEY07645.1| GTP-binding protein era [Brucella pinnipedialis M163/99/10] gi|261737861|gb|EEY25857.1| GTP-binding protein Era [Brucella sp. F5/99] gi|261741743|gb|EEY29669.1| GTP-binding protein era [Brucella suis bv. 5 str. 513] gi|262552296|gb|EEZ08286.1| GTP-binding protein era [Brucella ceti M490/95/1] gi|262765723|gb|EEZ11512.1| GTP-binding protein era [Brucella melitensis bv. 3 str. Ether] gi|263094579|gb|EEZ18377.1| GTP-binding protein Era [Brucella melitensis bv. 2 str. 63/9] gi|264660558|gb|EEZ30819.1| GTP-binding protein era [Brucella pinnipedialis M292/94/1] gi|294820615|gb|EFG37614.1| GTP-binding protein Era [Brucella sp. NVSL 07-0026] gi|326408684|gb|ADZ65749.1| GTP-binding protein Era [Brucella melitensis M28] gi|326538409|gb|ADZ86624.1| GTP-binding protein Era [Brucella melitensis M5-90] Length = 311 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 35/181 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST + + K I + TT GI EG + +L D PGI + Sbjct: 22 VALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPAQIVLVDTPGIFRPK 81 Query: 221 HQGAGIGDRFLKHT-----ERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKK 272 + DR + T + ++L I+ A EN +A + + D +R+K Sbjct: 82 RR----LDRAMVTTAWGGAKDADIILVIIDAQGGFNENAEALLESMKD--------VRQK 129 Query: 273 IEIVGLSQIDTVDSD---TLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHDK 325 +++ L+++D VD +LA+K NEL VPF+ S++ G G + + L + Sbjct: 130 -KVLVLNKVDRVDPPVLLSLAQKANEL------VPFDRTFMISALNGSGCKDLAKYLAES 182 Query: 326 I 326 + Sbjct: 183 V 183 >gi|225174184|ref|ZP_03728183.1| GTP-binding protein HSR1-related [Dethiobacter alkaliphilus AHT 1] gi|225169969|gb|EEG78764.1| GTP-binding protein HSR1-related [Dethiobacter alkaliphilus AHT 1] Length = 361 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI--LADIPGIIKN 219 + + G PN GKS ++++TRAK K+AD+PFTT P G++ Y++ + L D P ++ Sbjct: 124 VALAGCPNTGKSALISTLTRAKVKVADFPFTTSIPATGMMP--YEDIMIQLVDTPPFTED 181 Query: 220 AHQGAGIG 227 IG Sbjct: 182 GAPPGLIG 189 >gi|299749496|ref|XP_001836147.2| cytoplasmic protein [Coprinopsis cinerea okayama7#130] gi|298408466|gb|EAU85656.2| cytoplasmic protein [Coprinopsis cinerea okayama7#130] Length = 393 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVK----------EGYK---- 206 IGI+GLPN GKS+F ++ K A++P+ T+ P + E YK Sbjct: 24 IGIVGLPNVGKSSFFNVLSETDLGKAANFPYATINPEEARIPVPDARFDWLCELYKPASK 83 Query: 207 ---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+ A GAG+G+ FL H + +V A ++ Sbjct: 84 VPAHLTCIDIAGLTAGASTGAGLGNSFLSHVRAVDGIFQVVRAFDD 129 >gi|260770600|ref|ZP_05879532.1| GTP-binding protein HflX [Vibrio furnissii CIP 102972] gi|260614430|gb|EEX39617.1| GTP-binding protein HflX [Vibrio furnissii CIP 102972] gi|315178343|gb|ADT85257.1| GTP-binding protein HflX [Vibrio furnissii NCTC 11218] Length = 429 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 6/108 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +T A AD F TL P L + ILAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNRITSAGVYAADQLFATLDPTLRKIDLADVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILD 260 ++ H L+ T+ +LLH+V A EN+QA +L+ Sbjct: 257 RHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAVDDVLLE 304 >gi|259488392|tpe|CBF87794.1| TPA: GTP-binding protein YchF (AFU_orthologue; AFUA_1G09800) [Aspergillus nidulans FGSC A4] Length = 394 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 28/139 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTLYPNLGIV----------KEGYK--- 206 GI+GL N GKST ++T++ P A++P+ T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITKSGLGNP--ANFPYATIDPEEAKVIVPDERFDWLCEHYKPKS 81 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCI 258 + DI G+ + A GAG+G+ FL H + +V ++ +V+ + Sbjct: 82 KVPANLTIYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPV 141 Query: 259 LDELSAYNSELR-KKIEIV 276 D LS + ELR K IE V Sbjct: 142 RD-LSIISEELRIKDIEFV 159 >gi|195120167|ref|XP_002004600.1| GI19517 [Drosophila mojavensis] gi|193909668|gb|EDW08535.1| GI19517 [Drosophila mojavensis] Length = 652 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 15/184 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ + Sbjct: 171 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC--ILDELSAYNSELR----KKIEI 275 + +R + + L H+ + + + + QC L+E A ++ K I Sbjct: 230 ----LEERNVIEMQAITALAHLRACVLYFMDISEQCGHSLEEQVALFESIKPLFTNKPLI 285 Query: 276 VGLSQIDTVDSDTLARKKNELATQC---GQVPFEF-SSITGHGIPQILECLHDKIFSIRG 331 + +++ID + + L ++ + T+ QVP F S++ G+ ++ +++ S R Sbjct: 286 LAINKIDILQLEDLPEERQAIITKLQEDKQVPVMFMSTVQETGVVEVKNEACERLLSYRV 345 Query: 332 ENEF 335 + + Sbjct: 346 DQKM 349 >gi|320583545|gb|EFW97758.1| hypothetical protein HPODL_0388 [Pichia angusta DL-1] Length = 384 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------KEG 204 GI+GL N GKSTF ++TR+K A+YPF T+ P IV K Sbjct: 21 GIVGLANVGKSTFFQAITRSKLGNPANYPFATIKPEEAIVTVHSPKLDRLAELHVSQKSI 80 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+IK A G+G+ FL + +V ++ Sbjct: 81 PSVLRIYDIAGLIKGASDNKGLGNAFLSDIRAVDGIFQVVRGFRDD 126 >gi|156848537|ref|XP_001647150.1| hypothetical protein Kpol_1036p35 [Vanderwaltozyma polyspora DSM 70294] gi|156117834|gb|EDO19292.1| hypothetical protein Kpol_1036p35 [Vanderwaltozyma polyspora DSM 70294] Length = 393 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 22/107 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTLYPNLGIV-----------------K 202 GI+GL N GKSTF ++TR P A+YPF T+ P V Sbjct: 24 GIVGLANVGKSTFFQAITRCPLGNP--ANYPFATIDPEEARVIVPSPRFDELSKIYKPAS 81 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 E + DI G+ K A G G+G+ FL H + +V ++ Sbjct: 82 EVPAHLTVYDIAGLTKGASAGEGLGNAFLSHIRSVDSIYQVVRCFDD 128 >gi|326565439|gb|EGE15611.1| GTP-binding proten HflX [Moraxella catarrhalis 103P14B1] gi|326569444|gb|EGE19504.1| GTP-binding proten HflX [Moraxella catarrhalis BC8] gi|326577052|gb|EGE26947.1| GTP-binding proten HflX [Moraxella catarrhalis 101P30B1] Length = 469 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T AD F TL P L VK G +LAD G + Sbjct: 207 IPTISLVGYTNAGKSTLFNRLTDDNIYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFV 266 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ T +LLH++ A E++ A + + D L ++ Sbjct: 267 RHLPHELVESFHATLEETLEADLLLHVIDAASEDMHAQIEAVNDVLEQIQAD 318 >gi|326572797|gb|EGE22783.1| GTP-binding proten HflX [Moraxella catarrhalis BC7] Length = 469 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T AD F TL P L VK G +LAD G + Sbjct: 207 IPTISLVGYTNAGKSTLFNRLTDDNIYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFV 266 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ T +LLH++ A E++ A + + D L ++ Sbjct: 267 RHLPHELVESFHATLEETLEADLLLHVIDAASEDMHAQIEAVNDVLEQIQAD 318 >gi|326561134|gb|EGE11499.1| GTP-binding proten HflX [Moraxella catarrhalis 7169] gi|326566655|gb|EGE16796.1| GTP-binding proten HflX [Moraxella catarrhalis 12P80B1] gi|326567977|gb|EGE18074.1| GTP-binding proten HflX [Moraxella catarrhalis BC1] Length = 469 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T AD F TL P L VK G +LAD G + Sbjct: 207 IPTISLVGYTNAGKSTLFNRLTDDNIYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFV 266 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ T +LLH++ A E++ A + + D L ++ Sbjct: 267 RHLPHELVESFHATLEETLEADLLLHVIDAASEDMHAQIEAVNDVLEQIQAD 318 >gi|153009953|ref|YP_001371168.1| GTP-binding protein Era [Ochrobactrum anthropi ATCC 49188] gi|151561841|gb|ABS15339.1| GTP-binding protein Era [Ochrobactrum anthropi ATCC 49188] Length = 311 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 75/180 (41%), Gaps = 33/180 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI---- 216 + +IG PNAGKST + + K I + TT GI E + +L D PGI Sbjct: 22 VALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEDQAQIVLVDTPGIFRPK 81 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 + A GA D L VLL L EN +A LS+ Sbjct: 82 RRLDRAMVTTAWGGAKDADIIL-------VLLDSQGGLNENAEAL-------LSSMKDVR 127 Query: 270 RKKIEIVGLSQIDTVDSDT---LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 RKK+ + L+++D VD LARK NEL F S++ G G + + L + + Sbjct: 128 RKKVLV--LNKVDRVDPPVLLELARKANELV--AFDQTFMISALNGSGCKDLAKYLAENV 183 >gi|159899445|ref|YP_001545692.1| GTP1/OBG protein [Herpetosiphon aurantiacus ATCC 23779] gi|159892484|gb|ABX05564.1| GTP1/OBG protein [Herpetosiphon aurantiacus ATCC 23779] Length = 444 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 4/127 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I ++G NAGKST L + +A AD F TL P + G + ++ D G I+ Sbjct: 220 ISVVGYTNAGKSTLLNRLAQADVLAADMLFATLDPTTRKVALPGGRAVLMTDTVGFIQRL 279 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 R L+ VLLH++ NV+ ++ ++D LS +++ K + + Sbjct: 280 PTALVAAFRATLEEIAEADVLLHVLDLTHANVEEQFKTVIDTLSEL--KVQDKPILTVFN 337 Query: 280 QIDTVDS 286 +ID +DS Sbjct: 338 KIDKIDS 344 >gi|326559950|gb|EGE10348.1| GTP-binding proten HflX [Moraxella catarrhalis 46P47B1] gi|326577428|gb|EGE27312.1| GTP-binding proten HflX [Moraxella catarrhalis O35E] Length = 469 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T AD F TL P L VK G +LAD G + Sbjct: 207 IPTISLVGYTNAGKSTLFNHLTDDNIYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFV 266 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ T +LLH++ A E++ A + + D L ++ Sbjct: 267 RHLPHELVESFHATLEETLEADLLLHVIDAASEDMHAQIEAVNDVLEQIQAD 318 >gi|254561470|ref|YP_003068565.1| GTP-binding protein [Methylobacterium extorquens DM4] gi|254268748|emb|CAX24709.1| GTP-binding protein [Methylobacterium extorquens DM4] Length = 326 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 81/182 (44%), Gaps = 37/182 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI---- 216 + +IG+PNAGKST L ++ AK I TT GIV EG+ + +L D PGI Sbjct: 36 VALIGVPNAGKSTLLNALVGAKVSIVSRKVQTTRALVRGIVMEGHAQIVLVDTPGIFAPK 95 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 + +A GA D +L+ ++E V + IL L Sbjct: 96 RRLDRAMVHSAWSGAADADAIC-------LLIDARKGVDEEV----ETILRRLPEV---- 140 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQC-GQVPFE----FSSITGHGIPQILECLHD 324 K+ +I+ L++ID + + L EL + VPFE S++ G GI + + L Sbjct: 141 -KRPKILILNKIDLIARERLL----ELVAKLNAMVPFEDTFLISALKGDGIADLRKALAA 195 Query: 325 KI 326 ++ Sbjct: 196 RM 197 >gi|297617726|ref|YP_003702885.1| small GTP-binding protein [Syntrophothermus lipocalidus DSM 12680] gi|297145563|gb|ADI02320.1| small GTP-binding protein [Syntrophothermus lipocalidus DSM 12680] Length = 595 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 18/167 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-- 219 + ++G PN GKS L +T A+ +++Y T++ G V+ G K + D PGI + Sbjct: 3 VVLVGQPNVGKSAILHRLTGAEVIVSNYAGTSVELTRGNVRLGKKNIEIIDTPGIYSSLA 62 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSEL--RKKIEI 275 A + L E ++++++V A L N+ A EL K + Sbjct: 63 AVSAEETITKELLSKESVNLVINVVDATSLARNL------------ALTLELLGTAKPLL 110 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 V L+Q+D V S + + ELA G FS++TG G+ ++ + L Sbjct: 111 VLLNQMDRVRSKGMVIRHAELARWLGVTVIPFSAVTGEGVAEVFDYL 157 >gi|254703996|ref|ZP_05165824.1| GTP-binding protein Era [Brucella suis bv. 3 str. 686] gi|261754649|ref|ZP_05998358.1| GTP-binding protein era [Brucella suis bv. 3 str. 686] gi|261744402|gb|EEY32328.1| GTP-binding protein era [Brucella suis bv. 3 str. 686] Length = 311 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 35/181 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST + + K I + TT GI EG + +L D PGI + Sbjct: 22 VALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPAQIVLVDTPGIFRPK 81 Query: 221 HQGAGIGDRFLKHT-----ERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKK 272 + DR + T + ++L I+ A EN +A + + D +R+K Sbjct: 82 RR----LDRAMVTTAWGGAKDADIILVIIDAQGGFNENAEALLESMKD--------VRQK 129 Query: 273 IEIVGLSQIDTVDSD---TLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHDK 325 +++ L+++D VD +LA+K NEL VPF+ S++ G G + + L + Sbjct: 130 -KVLVLNKVDRVDPPVLLSLAQKANEL------VPFDRTFMISALNGSGCKDLAKYLAES 182 Query: 326 I 326 + Sbjct: 183 V 183 >gi|296814296|ref|XP_002847485.1| GTP-binding protein [Arthroderma otae CBS 113480] gi|238840510|gb|EEQ30172.1| GTP-binding protein [Arthroderma otae CBS 113480] Length = 413 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 28/109 (25%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPN 197 IG++G P++GKST L S+T A K+ FTT+ PN Sbjct: 7 IGLVGKPSSGKSTTLNSLTDASSKVG--IFTTIDPQRAIGYLQVDCACSRYNLQDRCKPN 64 Query: 198 LGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 G +G + L D+ G++ AH+G G+G++FL L+H+V Sbjct: 65 YGGCHDGRRSVPIELLDVAGLVPGAHEGKGLGNKFLDDLRHADALIHVV 113 >gi|121730802|ref|ZP_01682881.1| conserved hypothetical protein [Vibrio cholerae V52] gi|121627623|gb|EAX60304.1| conserved hypothetical protein [Vibrio cholerae V52] Length = 47 Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats. Identities = 20/39 (51%), Positives = 29/39 (74%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV 201 GI+GLPN GKST ++T+A + A++PF T+ PN G+V Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVV 44 >gi|253742417|gb|EES99251.1| GTP binding protein, putative [Giardia intestinalis ATCC 50581] Length = 368 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 5/94 (5%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I ++G P+ GKSTFL T + A Y FTTL G ++ + D+PGII+ Sbjct: 64 ARIALVGFPSVGKSTFLTRYTNTESASAAYEFTTLTCVPGTMEINGAPIQILDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTH----VLLHIVSALEE 249 A G G G + + T RT ++L+ +A++E Sbjct: 124 AATGLGKGRQVIA-TARTSDAIIMMLNSCNAVKE 156 >gi|23501550|ref|NP_697677.1| GTP-binding protein Era [Brucella suis 1330] gi|161618633|ref|YP_001592520.1| GTP-binding protein Era [Brucella canis ATCC 23365] gi|260566757|ref|ZP_05837227.1| GTP-binding protein Era [Brucella suis bv. 4 str. 40] gi|38257341|sp|Q8G1P9|ERA_BRUSU RecName: Full=GTPase Era gi|23347461|gb|AAN29592.1| GTP-binding protein Era [Brucella suis 1330] gi|161335444|gb|ABX61749.1| GTP-binding protein Era [Brucella canis ATCC 23365] gi|260156275|gb|EEW91355.1| GTP-binding protein Era [Brucella suis bv. 4 str. 40] Length = 311 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 35/181 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST + + K I + TT GI EG + +L D PGI + Sbjct: 22 VALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPAQIVLVDTPGIFRPK 81 Query: 221 HQGAGIGDRFLKHT-----ERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKK 272 + DR + T + ++L I+ A EN +A + + D +R+K Sbjct: 82 RR----LDRAMVTTAWGGAKDADIILVIIDAQGGFNENAEALLESMKD--------VRQK 129 Query: 273 IEIVGLSQIDTVDSD---TLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHDK 325 +++ L+++D VD +LA+K NEL VPF+ S++ G G + + L + Sbjct: 130 -KVLVLNKVDRVDPPVLLSLAQKANEL------VPFDRTFMISALNGSGCKDLAKYLAES 182 Query: 326 I 326 + Sbjct: 183 V 183 >gi|312898275|ref|ZP_07757666.1| ferrous iron transport protein B [Megasphaera micronuciformis F0359] gi|310620772|gb|EFQ04341.1| ferrous iron transport protein B [Megasphaera micronuciformis F0359] Length = 797 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T AK + +YP T+ G K+ + D+PG A Sbjct: 11 IALAGNPNCGKTTIFNNITGAKQHVGNYPGVTVEKKEGHCIYDGKDLLFIDLPGTYSLTA 70 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + R + E+ ++++I+ S LE N+ A Q +EL + + +VGL Sbjct: 71 RSLDEVVARNVIINEKPDLIVNILDGSNLERNLYLASQL---------AELERPM-VVGL 120 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 + +D D + ++L + G V G GI ++LE + D Sbjct: 121 NMMDIADRMNVKIDLDKLGERLGAVVVPLVGSKGVGIDKLLETVSD 166 >gi|254995133|ref|ZP_05277323.1| GTPase ObgE [Anaplasma marginale str. Mississippi] Length = 73 Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats. Identities = 34/58 (58%), Positives = 45/58 (77%) Query: 21 ISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQQHFKAQHGEKGMKRNR 78 +SFRREKFIEFGGPDGG+GG GG V A+S +NTL+ FRY QH +A++G+ G + + Sbjct: 1 MSFRREKFIEFGGPDGGNGGNGGSVIFIASSAVNTLLYFRYNQHIRAENGKAGSGKGK 58 >gi|50285461|ref|XP_445159.1| hypothetical protein [Candida glabrata CBS 138] gi|49524462|emb|CAG58059.1| unnamed protein product [Candida glabrata] Length = 393 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 22/107 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTLYPNLGIV-----------------K 202 GI+GL N GKSTF ++TR+ P A+YPF T+ P V Sbjct: 24 GIVGLANVGKSTFFQAITRSPLGNP--ANYPFATIDPEEARVIVPSPRFDELVNIYKPAS 81 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 E + DI G+ K A G G+G+ FL H + +V ++ Sbjct: 82 EVPAHLTVYDIAGLTKGASAGEGLGNAFLSHIRAVDSIYQVVRCFDD 128 >gi|296112906|ref|YP_003626844.1| GTP-binding proten HflX [Moraxella catarrhalis RH4] gi|295920600|gb|ADG60951.1| GTP-binding proten HflX [Moraxella catarrhalis RH4] Length = 469 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T AD F TL P L VK G +LAD G + Sbjct: 207 IPTISLVGYTNAGKSTLFNHLTDDNIYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFV 266 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ T +LLH++ A E++ A + + D L ++ Sbjct: 267 RHLPHELVESFHATLEETLEADLLLHVIDAASEDMHAQIEAVNDVLEQIQAD 318 >gi|284044712|ref|YP_003395052.1| GTP-binding proten HflX [Conexibacter woesei DSM 14684] gi|283948933|gb|ADB51677.1| GTP-binding proten HflX [Conexibacter woesei DSM 14684] Length = 450 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 10/167 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + ++G NAGKST L +T A+ + D F TL P K G ++++L D G I+ Sbjct: 223 VALVGYTNAGKSTLLNRLTGAEVGVRDRLFHTLDPTTRSYKLGGRDYLLTDTVGFIRKLP 282 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 HQ L+ T +LLH+V SA EE + + + L + + ++ I L Sbjct: 283 HQLVEAFGATLEETRLADLLLHVVDASAPEEELDEMMRAVDSVLGDIGAGDQPRLLI--L 340 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDK 325 ++ D +D D R + +L G + S+ TG G+ + E + ++ Sbjct: 341 NKADALDDDQ--RHEVQLRHPDGML---ISAATGEGLDALGERIEEE 382 >gi|255710507|ref|XP_002551537.1| KLTH0A01782p [Lachancea thermotolerans] gi|238932914|emb|CAR21095.1| KLTH0A01782p [Lachancea thermotolerans] Length = 393 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 22/107 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTLYPN--------------LGIVKEGY 205 GI+GL N GKSTF ++TR P A+YPF T+ P I K Sbjct: 24 GIVGLANVGKSTFFQAITRCPLGNP--ANYPFATIDPEEARVIVPSPRFDALCDIYKPAS 81 Query: 206 K---EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 K + DI G+ K A G G+G+ FL H + +V ++ Sbjct: 82 KVPAHLTVYDIAGLTKGASAGEGLGNAFLSHIRAVDSIYQVVRCFDD 128 >gi|321254363|ref|XP_003193049.1| cytoplasm protein [Cryptococcus gattii WM276] gi|317459518|gb|ADV21262.1| cytoplasm protein, putative [Cryptococcus gattii WM276] Length = 454 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPN--------------LGIVKEGYK 206 +GI+GLPN GKS+F ++++ K A++P+ T+ P + K K Sbjct: 81 VGIVGLPNVGKSSFFNTLSQTDLGKAANFPYATIDPEEARIPVPDERFDWLCSVYKPASK 140 Query: 207 --EFILA-DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 F+ DI G+ A GAG+G+ FL H + +V A ++ Sbjct: 141 VPAFLTCIDIAGLTAGASTGAGLGNAFLSHVRAVDGIFQVVRAFDD 186 >gi|319943734|ref|ZP_08018015.1| GTP-binding protein HflX [Lautropia mirabilis ATCC 51599] gi|319742967|gb|EFV95373.1| GTP-binding protein HflX [Lautropia mirabilis ATCC 51599] Length = 393 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 62/131 (47%), Gaps = 22/131 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP---NLGIVKEGYKEFILADIPGIIK 218 + +IG NAGKST +TRA AD F TL P LG+ G E +L+D G I+ Sbjct: 187 VSLIGYTNAGKSTLFNRLTRAGALAADQLFATLDPLTRRLGL-GNGL-EVVLSDTVGFIR 244 Query: 219 NAHQGAGIGDR-FLKHTERTHVLLHIVSA----LEENVQAAYQCI-------LDELSAYN 266 N G R L+ T +LLH+V A E ++A Q I +++L YN Sbjct: 245 NLPHGLVAAFRATLEETAEADLLLHVVDAGSPDRERQIEAVNQVIAEIGAGEVEQLMIYN 304 Query: 267 SELRKKIEIVG 277 KI++ G Sbjct: 305 -----KIDLTG 310 >gi|317493570|ref|ZP_07951991.1| GTP-binding protein HflX [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918513|gb|EFV39851.1| GTP-binding protein HflX [Enterobacteriaceae bacterium 9_2_54FAA] Length = 426 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T+A AD F TL P L ++ +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNHITKADVYAADQLFATLDPTLRRIEVADVGTTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +LLHI+ A ++EN+ A +L E+ A + Sbjct: 257 RHLPHDLVAAFKATLQETRQASLLLHIIDASDARVDENIDAV-NTVLAEIEADEIPV--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D +N+ + V S+ TG GI + + L +++ Sbjct: 313 --LLVMNKIDMLDEFEPRIDRND---ENLPVRVWVSAQTGVGIDLLFQALTERL 361 >gi|328543916|ref|YP_004304025.1| GTP binding protein-like protein [polymorphum gilvum SL003B-26A1] gi|326413660|gb|ADZ70723.1| GTP binding protein-like protein [Polymorphum gilvum SL003B-26A1] Length = 458 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 38/192 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNA 220 + ++G NAGKST +T A+ D F TL P L +K + +E IL+D G I Sbjct: 232 VALVGYTNAGKSTLFNRLTEAQVLAKDLLFATLDPTLRRIKLPHGREVILSDTVGFISEL 291 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS-----AYNSELRKKIEI 275 TH++ + LEE ++A + +++ A +++ + +E Sbjct: 292 P---------------THLVAAFRATLEEVLEADLILHVRDIAHPDTDAQAADVARTLED 336 Query: 276 VGL------------SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 +G+ ++ID +D++ R+ LA Q P S++TG GI +L + Sbjct: 337 LGVGPTTGAPIVEVWNKIDCLDAE---RRARLLAGQTDSGPVALSALTGEGIGALLARI- 392 Query: 324 DKIFSIRGENEF 335 + F +G++ F Sbjct: 393 -EAFMAQGDDTF 403 >gi|15220827|ref|NP_178192.1| PDE318 (pigment defective 318); GTP binding [Arabidopsis thaliana] gi|22135878|gb|AAM91521.1| GTP-binding protein, putative [Arabidopsis thaliana] gi|23197644|gb|AAN15349.1| GTP-binding protein, putative [Arabidopsis thaliana] gi|332198325|gb|AEE36446.1| putative GTP-binding protein [Arabidopsis thaliana] Length = 451 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 5/89 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + + ++G PN GKS+ + ++ KP+I +YPFTT +G + Y+ F + D PG+++ Sbjct: 253 MPTLCLVGAPNVGKSSLVRILSTGKPEICNYPFTTRGILMGHIVLNYQRFQVTDTPGLLR 312 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 + DR VL H+ +A+ Sbjct: 313 RCDE-----DRNNLEKLTLAVLTHLPTAV 336 >gi|307352871|ref|YP_003893922.1| GTP-binding protein HSR1-like protein [Methanoplanus petrolearius DSM 11571] gi|307156104|gb|ADN35484.1| GTP-binding protein HSR1-related protein [Methanoplanus petrolearius DSM 11571] Length = 320 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 36/61 (59%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + + G PN GKS+F+A V+ AKP+IA Y FTT +G G + + D PG++ H Sbjct: 158 VVVAGYPNVGKSSFIALVSSAKPQIAGYAFTTKSIMVGHHPVGRERIQIVDTPGLLDRPH 217 Query: 222 Q 222 + Sbjct: 218 E 218 >gi|41614953|ref|NP_963451.1| hypothetical protein NEQ157 [Nanoarchaeum equitans Kin4-M] gi|40068677|gb|AAR39012.1| NEQ157 [Nanoarchaeum equitans Kin4-M] Length = 319 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/59 (44%), Positives = 36/59 (61%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I ++ I GLPN GKST L +T K K A+YPFTT +G +K + + + D PGI+ Sbjct: 156 IYNVVISGLPNVGKSTLLNILTNNKVKTANYPFTTKQILIGKIKTPFGDIAVIDTPGIL 214 >gi|327395421|dbj|BAK12843.1| GTP-binding protein hflX [Pantoea ananatis AJ13355] Length = 426 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST ++T A AD F TL P L + + +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNAITSANVYAADQLFATLDPTLRRLNVADVGDVVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T + +L+H++ A + EN+ A + +L+E+ A Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLMHVIDAADVRVNENIGAVNE-VLEEIDADEIP---- 311 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID +D ++E + V S+ +G GIP + + L +++ Sbjct: 312 -TLLIMNKIDMLDGFEPRIDRDE---ENMPVRVWLSAQSGVGIPLLWQALSERL 361 >gi|295094268|emb|CBK83359.1| GTP-binding protein HflX [Coprococcus sp. ART55/1] Length = 441 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 7/166 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 +GI+G NAGKST L ++T A D F TL P G G + +L D G I+ Sbjct: 216 VGIVGYTNAGKSTLLNALTGAGVLQEDKLFATLDPTTRGYKLPGGQNILLTDTVGFIRKL 275 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN-SELRKKIEIVGL 278 H L+ + V+LH+V A +EN + + L E K I Sbjct: 276 PHHLVEAFGSTLEEAKYCDVILHVVDASDENWDKNIETVYGTLKQLKIDENSGKPVITVF 335 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 ++ID + D L ++ A + S+ TG G+P++ + + Sbjct: 336 NKIDRISKDDLVGVRDLRADKT----LYISAATGQGLPELANAIEE 377 >gi|290983455|ref|XP_002674444.1| predicted protein [Naegleria gruberi] gi|284088034|gb|EFC41700.1| predicted protein [Naegleria gruberi] Length = 637 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 28/171 (16%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 ++G PN GKS+F+ ++TRA+ + YPFTT +G ++ Y ++ L D PGI+ + Sbjct: 173 LVGYPNVGKSSFMNNMTRAQVDVQPYPFTTKSLFVGHMEYRYLKWQLIDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN----SELRKKIE----- 274 + R + + H+ S + Y + E YN +L K ++ Sbjct: 230 --LEQRNTIEMQSITAMAHLRSTI------LYLLDMSETCGYNIQQQCDLFKNVKPLFAG 281 Query: 275 ---IVGLSQIDTVDSDTLA----RKKNELATQCGQVPFEFSSITGHGIPQI 318 ++ L+++D V D L+ + E+A C + S+I G+ ++ Sbjct: 282 KPVLLVLTKVDLVKYDELSDLHKKMLQEVADMCSDM-LAISNIDQSGLNEV 331 >gi|315499945|ref|YP_004088748.1| gtp-binding protein era [Asticcacaulis excentricus CB 48] gi|315417957|gb|ADU14597.1| GTP-binding protein Era [Asticcacaulis excentricus CB 48] Length = 323 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 21/184 (11%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI----- 216 IIG PNAGKST + ++ +K I TT +P GI G + +L D PGI Sbjct: 17 AIIGAPNAGKSTLVNALVGSKVSIVTQKVQTTRFPVRGIAIHGKAQIVLVDTPGIFKPRR 76 Query: 217 ------IKNAHQGAGIGDRFLKHTER-THVLLHIVSALEENVQAAYQCILDE---LSAYN 266 +K+A GA D + + H+ +H + + A + D ++ Sbjct: 77 RLDRAMVKSAWGGAEDADIVVMLIDAPAHLAVHFPAPDTKPTGADKLAVEDAETIIAGLK 136 Query: 267 SELRKKIEIVGLSQIDTVDSDTLARKKNELATQ--CGQVPFEFSSITGHGIPQILECLHD 324 + R+ I + L++ID + D L + L + QV F S+ G+GI ++E L D Sbjct: 137 ANNRRAILV--LNKIDLLRRDNLLALADSLFKEGVFDQV-FMISAEKGNGISDLMEALAD 193 Query: 325 KIFS 328 K+ S Sbjct: 194 KMPS 197 >gi|298712651|emb|CBJ48676.1| DRG1, developmenally regulated GTPase 1 [Ectocarpus siliculosus] Length = 372 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 2/111 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +G +G P+ GKST L +T + A Y FTTL G + + + D+PGII+ A Sbjct: 71 VGFVGFPSVGKSTLLTKLTGTHSEAAAYEFTTLTAVPGTLNYRGAKIQMLDLPGIIEGAK 130 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G G G + + ++LL + ++ + I EL + L +K Sbjct: 131 DGKGRGRQVISTARTCNMLLICLDVMKSMTHK--KVIEKELDGFGIRLNQK 179 >gi|220927100|ref|YP_002502402.1| GTP-binding protein Era [Methylobacterium nodulans ORS 2060] gi|219951707|gb|ACL62099.1| GTP-binding protein Era [Methylobacterium nodulans ORS 2060] Length = 320 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 19/169 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGII--K 218 + +IG+PNAGKST L S+ +K I TT GI EG + + D PGI K Sbjct: 30 VALIGVPNAGKSTLLNSLVGSKVSIVSRKVQTTRALVRGIAMEGSAQIVFVDTPGIFAPK 89 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A + + + V L I + + V A +LD L ELR+ +I+ L Sbjct: 90 RRLDRAMVTSAWSGAADADAVCLLIDA--RKGVDAEVDALLDRL----PELRRP-KILVL 142 Query: 279 SQIDTVDSDTLARKKNELATQC-GQVPFE----FSSITGHGIPQILECL 322 ++ID + + L ELA ++PF+ S++TG G+ + L Sbjct: 143 NKIDVIARERLL----ELAASLNARLPFDHTFMVSALTGDGVADLRRVL 187 >gi|159041871|ref|YP_001541123.1| small GTP-binding protein [Caldivirga maquilingensis IC-167] gi|157920706|gb|ABW02133.1| small GTP-binding protein [Caldivirga maquilingensis IC-167] Length = 355 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 13/88 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 I I G+PN GKS+ +A V+ KP+IADYPFTT +G VK G + D PG++ Sbjct: 169 IVISGMPNTGKSSLVACVSTKKPEIADYPFTTKQIIIGHVKVYGMYAVQVIDTPGLL--- 225 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALE 248 DR L +ER + L + AL Sbjct: 226 -------DRPL--SERNRIELQAILALR 244 >gi|67539390|ref|XP_663469.1| hypothetical protein AN5865.2 [Aspergillus nidulans FGSC A4] gi|40739184|gb|EAA58374.1| hypothetical protein AN5865.2 [Aspergillus nidulans FGSC A4] gi|259479973|tpe|CBF70681.1| TPA: nucleolar GTP-binding protein (Nog1), putative (AFU_orthologue; AFUA_2G11510) [Aspergillus nidulans FGSC A4] Length = 656 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL S+TRA + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLRSITRADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC + D++ ++S KI V Sbjct: 232 MNTIE-----MQSITAIAHLRSAVMYFMDLSEQCGYSVADQIKLFHSIRPLFANKIVFVV 286 Query: 278 LSQIDTVDSDTLA---RKKNELATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + L +++ + + G V + S T G+ + DK+ + R Sbjct: 287 VNKIDVRRPEDLEPELQEQMQSMLKTGDVELLQLSCTTTEGVTNVKNAACDKLLAER 343 >gi|320165133|gb|EFW42032.1| developmentally regulated GTP binding protein 1 [Capsaspora owczarzaki ATCC 30864] Length = 366 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 2/112 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A IG +G P+ GKST L+++ ++A Y FTTL G+V + D+PGII Sbjct: 63 ATIGFLGFPSVGKSTLLSNLAGVHSEVAAYEFTTLTTVPGMVDYKGARIQMLDLPGIISG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 A G G + + ++ ++ L Q A + EL ++ L K Sbjct: 123 AADNKGRGRQVIAVARSCDLIFFVLDVLRPLNQKAL--LEKELDSFGIRLNK 172 >gi|134109235|ref|XP_776732.1| hypothetical protein CNBC2230 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259412|gb|EAL22085.1| hypothetical protein CNBC2230 [Cryptococcus neoformans var. neoformans B-3501A] Length = 454 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGYKEF------------ 208 +GI+GLPN GKS+F ++++ K A++P+ T+ P + + F Sbjct: 81 VGIVGLPNVGKSSFFNTLSQTDLGKAANFPYATIDPEEARIPVPDERFDWLCSVYKPASK 140 Query: 209 -----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+ A GAG+G+ FL H + +V A ++ Sbjct: 141 VPAFLTCIDIAGLTAGASTGAGLGNAFLSHVRAVDGIFQVVRAFDD 186 >gi|242774548|ref|XP_002478462.1| GTP-binding protein [Talaromyces stipitatus ATCC 10500] gi|218722081|gb|EED21499.1| GTP-binding protein [Talaromyces stipitatus ATCC 10500] Length = 413 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 28/109 (25%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI----VKEGYKEFILAD----- 212 IG++G P++GKST L S+T A K+ FTT+ P I + K F L D Sbjct: 7 IGLVGKPSSGKSTTLNSLTDASSKVG--YFTTIDPQRAIGYLQIDCACKRFNLTDKCRPN 64 Query: 213 -----------------IPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + G++ AH+G G+G++FL L+H+V Sbjct: 65 YGGCTGGRRSVPIELLDVAGLVPGAHEGKGLGNKFLDDLRHADALIHVV 113 >gi|297842783|ref|XP_002889273.1| PDE318 [Arabidopsis lyrata subsp. lyrata] gi|297335114|gb|EFH65532.1| PDE318 [Arabidopsis lyrata subsp. lyrata] Length = 449 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 38/64 (59%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + + ++G PN GKS+ + ++ KP+I +YPFTT +G + Y+ F + D PG+++ Sbjct: 253 MPTLCLVGAPNVGKSSLVRILSTGKPEICNYPFTTRGILMGHIVLNYQRFQVTDTPGLLR 312 Query: 219 NAHQ 222 + Sbjct: 313 RCDE 316 >gi|225559118|gb|EEH07401.1| nucleolar GTP-binding protein [Ajellomyces capsulatus G186AR] Length = 666 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL ++T+A + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLRNITKADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC + D++ +NS KI V Sbjct: 232 MNTIE-----MQSITAIAHLRSAILYFMDLSEQCGYSVTDQIKLFNSIKPLFANKIVFVV 286 Query: 278 LSQIDTVDSDTL-ARKKNELAT--QCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + + L A + EL + + G V + S T G+ + D++ + R Sbjct: 287 VNKIDVMRPEDLDASTQAELQSILKPGDVEMLQVSCTTTEGVTTVKNAACDRLLAER 343 >gi|58265246|ref|XP_569779.1| cytoplasm protein [Cryptococcus neoformans var. neoformans JEC21] gi|57226011|gb|AAW42472.1| cytoplasm protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 454 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGYKEF------------ 208 +GI+GLPN GKS+F ++++ K A++P+ T+ P + + F Sbjct: 81 VGIVGLPNVGKSSFFNTLSQTDLGKAANFPYATIDPEEARIPVPDERFDWLCSVYKPASK 140 Query: 209 -----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+ A GAG+G+ FL H + +V A ++ Sbjct: 141 VPAFLTCIDIAGLTAGASTGAGLGNAFLSHVRAVDGIFQVVRAFDD 186 >gi|325088182|gb|EGC41492.1| nucleolar GTP-binding protein [Ajellomyces capsulatus H88] Length = 666 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL ++T+A + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLRNITKADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC + D++ +NS KI V Sbjct: 232 MNTIE-----MQSITAIAHLRSAILYFMDLSEQCGYSVTDQIKLFNSIKPLFANKIVFVV 286 Query: 278 LSQIDTVDSDTL-ARKKNELAT--QCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + + L A + EL + + G V + S T G+ + D++ + R Sbjct: 287 VNKIDVMRPEDLDASTQAELQSILKPGDVEMLQVSCTTTEGVTTVKNAACDRLLAER 343 >gi|225848777|ref|YP_002728941.1| GTP-binding protein HflX [Sulfurihydrogenibium azorense Az-Fu1] gi|225644205|gb|ACN99255.1| GTP-binding protein HflX [Sulfurihydrogenibium azorense Az-Fu1] Length = 369 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 21/137 (15%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL--------YPNLGIVKEGYKEFIL 210 I ++ ++G NAGKS+ L +T+ I+D F TL +P++ K I+ Sbjct: 193 ILNVALVGYTNAGKSSLLNRLTKRDTYISDQLFATLDTKTSFIHFPDIN------KRVII 246 Query: 211 ADIPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS 267 D G +++ Q I D F LK TE ++LH++ ++N Q + D L Sbjct: 247 TDTVGFVEDMPQ--EIMDAFMTTLKETEEADLILHVIDISDDNWMLKKQTVEDVLKKLKL 304 Query: 268 ELRKKIEIVGLSQIDTV 284 E + I + ++++D V Sbjct: 305 EEKPVINV--MNKVDKV 319 >gi|33151908|ref|NP_873261.1| GTP-binding protein HflX [Haemophilus ducreyi 35000HP] gi|33148129|gb|AAP95650.1| GTP-binding protein HflX [Haemophilus ducreyi 35000HP] Length = 449 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 7/112 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T+A AD F TL P L ++ + ILAD G I Sbjct: 213 IPTVSLVGYTNAGKSTLFNAITQAGVYAADQLFATLDPTLRRMQIQDVGTTILADTVGFI 272 Query: 218 K-NAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSA 264 + H L+ T ++LLH+V +E N+ A Q +LDE+ A Sbjct: 273 RFLPHDLVSAFKSTLQETTEANLLLHVVDIADERKNDNITAVNQ-VLDEIGA 323 >gi|240280292|gb|EER43796.1| GTP-binding protein [Ajellomyces capsulatus H143] Length = 404 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 14/97 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK---------IADYPFTT---LYPNLGIVKEGYKEFI 209 IG++G P++GKST L S T P+ A F PN G EG + Sbjct: 7 IGLVGKPSSGKSTTLNSFTTIDPQRAIGYLQVDCACKRFNVSDKCKPNYGGCHEGRRSVP 66 Query: 210 --LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 L D+ G++ AH+G G+G++FL L+H+V Sbjct: 67 IELLDVAGLVPGAHEGRGLGNKFLDDLRHADALVHVV 103 >gi|241153677|ref|XP_002407133.1| GTP-binding protein CRFG/NOG1, putative [Ixodes scapularis] gi|215494048|gb|EEC03689.1| GTP-binding protein CRFG/NOG1, putative [Ixodes scapularis] Length = 623 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 30/189 (15%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ + + Sbjct: 173 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYIRWQVIDTPGILDHPLE- 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD--ELSAYNSELRKKIE------- 274 ER + + ++AL +++A ++D E + E + K+ Sbjct: 232 -----------ERNTIEMQAITAL-AHIRACVLYLMDLSEQCGHTVEEQMKLLFNIKPLF 279 Query: 275 -----IVGLSQIDTVDSDTLARKKNELATQCGQ--VP-FEFSSITGHGIPQILECLHDKI 326 +V ++++D V D L+ ++ EL + + +P + S++T G+ ++ D + Sbjct: 280 VNKPFLVIVNKVDIVRPDDLSPERKELFAKLSEESIPVLQMSTVTEEGVAEVRNEACDLL 339 Query: 327 FSIRGENEF 335 + R E + Sbjct: 340 LAHRMEAKL 348 >gi|326202948|ref|ZP_08192815.1| GTP-binding proten HflX [Clostridium papyrosolvens DSM 2782] gi|325987025|gb|EGD47854.1| GTP-binding proten HflX [Clostridium papyrosolvens DSM 2782] Length = 596 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 16/164 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I I+G NAGKST L + ++ + D F TL P+ + +E IL D G I+ Sbjct: 380 IAIVGYTNAGKSTLLNRMCGSEVLVEDKLFATLDPSARQLTMSDGREAILVDTVGFIRKL 439 Query: 221 -HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H L+ +LLH+V A ENV S S + K +E +G S Sbjct: 440 PHDLIEAFKSTLEEAVHADMLLHVVDASNENV-----------SMQISVVEKLLEELGAS 488 Query: 280 QIDTV---DSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 +T+ + L + ++T E S+ TG GI Q+LE Sbjct: 489 TKNTILVLNKQDLIKDGRRISTVGYSSVCEISASTGFGIEQLLE 532 >gi|261406202|ref|YP_003242443.1| GTP-binding proten HflX [Paenibacillus sp. Y412MC10] gi|261282665|gb|ACX64636.1| GTP-binding proten HflX [Paenibacillus sp. Y412MC10] Length = 430 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 16/170 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + ++G NAGKST L +T A I + F TL P +++ KE +L D G I+N Sbjct: 210 VALVGYTNAGKSTLLNRLTAADVYIENQLFATLDPTSRVLELPSGKEVVLTDTVGFIQNL 269 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKKIEIV 276 H L+ ++LH+V A + + A Q IL +L A + K +IV Sbjct: 270 PHDLVAAFRATLEEANEADLILHVVDASSPMRDEQMAVVQSILQDLGASD-----KPQIV 324 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ D + L L T GQ + S+ + + E + D++ Sbjct: 325 LFNKKDACEPGQLEM----LPTGEGQ--LKISAYVDQDLESVREAIQDRL 368 >gi|261197453|ref|XP_002625129.1| developmentally regulated GTP-binding protein 1 [Ajellomyces dermatitidis SLH14081] gi|239595759|gb|EEQ78340.1| developmentally regulated GTP-binding protein 1 [Ajellomyces dermatitidis SLH14081] gi|239606754|gb|EEQ83741.1| developmentally regulated GTP-binding protein 1 [Ajellomyces dermatitidis ER-3] gi|327351218|gb|EGE80075.1| GTP-binding protein RBG1 [Ajellomyces dermatitidis ATCC 18188] Length = 367 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGII 217 +A +G IG P+ GKST ++ +T + A Y FTTL G ++ G K IL D+PGII Sbjct: 63 VASVGFIGFPSVGKSTLMSKITGQHSEAAAYEFTTLTTVPGQVIYNGAKIQIL-DLPGII 121 Query: 218 KNAHQGAGIGDRFL 231 + A G G G + + Sbjct: 122 QGAKDGKGRGRQVI 135 >gi|225872683|ref|YP_002754140.1| putative GTP-binding protein HflX [Acidobacterium capsulatum ATCC 51196] gi|225792080|gb|ACO32170.1| putative GTP-binding protein HflX [Acidobacterium capsulatum ATCC 51196] Length = 432 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 15/173 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 + + ++G NAGKST ++T A + F TL P L IV ++ +L+D G I Sbjct: 209 VPTVALVGYTNAGKSTLFNALTGAGVLASSRMFATLDPKLRAIVLPSRRKVLLSDTVGFI 268 Query: 218 KNAHQGAGIGDR-FLKHTERTHVLLHI---VSALEENVQAAYQCILDELSAYNSELRKKI 273 ++ R L+ ++ VLLH+ SA E +A + +L EL A + + +I Sbjct: 269 RDLPPTLISSFRATLEEVQKAEVLLHVQDCSSATREEHRAEVKHVLAELGAGD---KPQI 325 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E+ L+++D + + ++ L + G+ P S+ TG G+ +LE + + + Sbjct: 326 EV--LNKVDLLSPE----EQEGLRSGHGR-PMAISARTGMGLEDLLERIDEAL 371 >gi|158430436|pdb|2QU8|A Chain A, Crystal Structure Of Putative Nucleolar Gtp-Binding Protein 1 Pff0625w From Plasmodium Falciparum Length = 228 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 17/164 (10%) Query: 166 GLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAG 225 G PN GKS+F+ V+RA + Y FTT +G ++ + D PG++ A + Sbjct: 36 GAPNVGKSSFMNIVSRANVDVQSYSFTTKNLYVGHFDHKLNKYQIIDTPGLLDRAFE--- 92 Query: 226 IGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAY---NSELRKKIEIVGLS 279 +R L HI + + + QC I ++++ + S K ++G + Sbjct: 93 --NRNTIEMTTITALAHINGVILFIIDISEQCGLTIKEQINLFYSIKSVFSNKSIVIGFN 150 Query: 280 QIDTVDSDTLARKKNELATQC-----GQVPF-EFSSITGHGIPQ 317 +ID + D+L+ L Q + F FS++TG G+ Q Sbjct: 151 KIDKCNMDSLSIDNKLLIKQILDNVKNPIKFSSFSTLTGVGVEQ 194 >gi|154248312|ref|YP_001419270.1| small GTP-binding protein [Xanthobacter autotrophicus Py2] gi|154162397|gb|ABS69613.1| small GTP-binding protein [Xanthobacter autotrophicus Py2] Length = 457 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 7/174 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST +TRA+ D F TL P L V + IL+D G I Sbjct: 225 VALVGYTNAGKSTLFNRLTRAEVMAKDLLFATLDPTLRAVDLPHGTRIILSDTVGFISEL 284 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 Q L+ ++LH+ +S + + QAA +L++L + IE+ Sbjct: 285 PTQLVAAFRATLEEVLEADLILHVRDISHPDTDAQAADVSDVLEDLGVDPQPGGRVIEV- 343 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 ++ID + D + +N A + P S++TG G +L + +I + R Sbjct: 344 -WNKIDRLAPDEREQVENRAARGGAEAPVPVSALTGEGTDDLLGLIERRITAGR 396 >gi|170591450|ref|XP_001900483.1| Developmentally regulated GTP-binding protein 1 [Brugia malayi] gi|158592095|gb|EDP30697.1| Developmentally regulated GTP-binding protein 1, putative [Brugia malayi] Length = 320 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 46/87 (52%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G P+ GKST L ++ ++A Y FTTL G+++ + L D+PGII+ A Sbjct: 13 IFISGFPSVGKSTLLCNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEGAK 72 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALE 248 G G G + + ++L ++ ++ Sbjct: 73 DGKGRGRQVIAVARTCSLILMVLDVMK 99 >gi|269860706|ref|XP_002650072.1| GTPase, predicted [Enterocytozoon bieneusi H348] gi|220066503|gb|EED43982.1| GTPase, predicted [Enterocytozoon bieneusi H348] Length = 363 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 37/60 (61%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 IA IG +G P+ GKST ++ +T +IA Y FTTL GI++ + + D+PGII+ Sbjct: 63 IARIGFVGFPSVGKSTLMSKLTGVNSEIAAYEFTTLTAIPGIIQYNGAKLQIIDLPGIIE 122 >gi|145592404|ref|YP_001154406.1| small GTP-binding protein [Pyrobaculum arsenaticum DSM 13514] gi|145284172|gb|ABP51754.1| small GTP-binding protein [Pyrobaculum arsenaticum DSM 13514] Length = 345 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 2/57 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGII 217 I + G PN GKS+F+ V+ AKP++A+YPFTT +LG IV G K ++ D PG++ Sbjct: 171 IVVAGAPNVGKSSFVRCVSTAKPEVAEYPFTTKQIHLGHIVLRGDKVQVI-DTPGLL 226 >gi|67521654|ref|XP_658888.1| hypothetical protein AN1284.2 [Aspergillus nidulans FGSC A4] gi|40746721|gb|EAA65877.1| hypothetical protein AN1284.2 [Aspergillus nidulans FGSC A4] Length = 580 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 28/139 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTLYPNLGIV----------KEGYK--- 206 GI+GL N GKST ++T++ P A++P+ T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITKSGLGNP--ANFPYATIDPEEAKVIVPDERFDWLCEHYKPKS 81 Query: 207 ----EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCI 258 + DI G+ + A GAG+G+ FL H + +V ++ +V+ + Sbjct: 82 KVPANLTIYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPV 141 Query: 259 LDELSAYNSELR-KKIEIV 276 D LS + ELR K IE V Sbjct: 142 RD-LSIISEELRIKDIEFV 159 >gi|307824089|ref|ZP_07654316.1| GTP-binding proten HflX [Methylobacter tundripaludum SV96] gi|307734873|gb|EFO05723.1| GTP-binding proten HflX [Methylobacter tundripaludum SV96] Length = 401 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 14/175 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST +T A +AD F TL P L K E +LAD G I Sbjct: 175 VPSVSLVGYTNAGKSTLFNKLTGADIYVADQLFATLDPTLRNCKLPNSSEIVLADTVGFI 234 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA-LEENVQAAYQC--ILDELSAYNSELRKKI 273 ++ H+ L+ +LLH++ A ++ + YQ +L+++ A Sbjct: 235 RHLPHELVAAFKSTLQEASEADLLLHVIDASSDDRAETIYQVNQVLEDIKAN-------- 286 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 E+ L + +D T + + E V S+ TG G+ + + L + IFS Sbjct: 287 EVRQLEVFNKIDLLTDIQPRIERDDVGNPVRVWLSAETGAGVDLLYQALAE-IFS 340 >gi|312794069|ref|YP_004026992.1| gtp-binding proten hflx [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181209|gb|ADQ41379.1| GTP-binding proten HflX [Caldicellulosiruptor kristjanssonii 177R1B] Length = 509 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 26/174 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA- 220 + IIG NAGKST + +++A + D F TL V KEF+L D G I+N Sbjct: 353 VSIIGYTNAGKSTLMNRISKADVLVEDKLFATLDTTTRRVYHKGKEFLLTDTVGFIRNLP 412 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRK---KI 273 H L+ + ++++L++V + ++++ + + +L +L A N L + KI Sbjct: 413 HHLVEAFSSTLEEVKYSNLILNVVDISDPYYYDHIKVS-EDLLKQLGAENIPLIRVYNKI 471 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILECLHDKI 326 + V LS +D D+ VP F S+ G GI +L+ + ++I Sbjct: 472 DKVDLSSVDVFDN----------------VPHVFISAQDGRGIDTLLDMIVERI 509 >gi|257386614|ref|YP_003176387.1| GTP-binding protein HSR1-related [Halomicrobium mukohataei DSM 12286] gi|257168921|gb|ACV46680.1| GTP-binding protein HSR1-related [Halomicrobium mukohataei DSM 12286] Length = 329 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 12/87 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ VT A+ + A YPFTT +G V+ + L D PG++ Sbjct: 168 IVVAGYPNVGKSSFVNLVTNARNETASYPFTTTQIRVGHVERDRIRYQLVDTPGLL---- 223 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALE 248 DR ER + VSA+E Sbjct: 224 ------DR--PEAERNDIESQAVSAVE 242 >gi|223997780|ref|XP_002288563.1| nucleolar gtp-binding protein 1 [Thalassiosira pseudonana CCMP1335] gi|220975671|gb|EED93999.1| nucleolar gtp-binding protein 1 [Thalassiosira pseudonana CCMP1335] Length = 634 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 13/177 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + GLPN GKS+F+ +TRA + Y FTT +G Y + + D PGI+ ++ + Sbjct: 173 MCGLPNVGKSSFMNKITRANVDVQPYAFTTKSLFVGHTDYKYLRWQVIDTPGILDHSLEQ 232 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAY----QCILDELSAYNSELRKKIEIVGLS 279 + T H+ ++ ++ + Q Y QC L + K +V ++ Sbjct: 233 RNTIE-MQAITALAHLTCSVLYFMDISEQCGYTIEQQCNL--FRSIQPLFANKQLVVVIN 289 Query: 280 QIDTVDSDTLARKKN----ELATQCG--QVPFEFSSITGHGIPQILECLHDKIFSIR 330 +ID +TL K EL + G S+++ G+ Q+ DK+ + R Sbjct: 290 KIDQQPWETLEADKKRMIEELVKESGPNTTMLTMSNVSEEGVSQVKNQACDKLLAAR 346 >gi|301105753|ref|XP_002901960.1| nucleolar GTP-binding protein 1 [Phytophthora infestans T30-4] gi|262099298|gb|EEY57350.1| nucleolar GTP-binding protein 1 [Phytophthora infestans T30-4] Length = 664 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 14/166 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ +A Sbjct: 173 VTGFPNVGKSSFMNKVTRADVDVQPYAFTTKALYVGHLDYKYLRWQVIDTPGILDHA--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNSELR----KKIEIV 276 + DR + L H+ +++ + + QC I +LS + + +R K ++ Sbjct: 230 --LEDRNTIEMQAVTALAHLQASILFFMDISEQCGFTIEQQLSLFEN-IRPLFANKPLVL 286 Query: 277 GLSQIDTVDSDTLAR-KKNELATQCGQVPFEFSSITGHGIPQILEC 321 ++ID + + L+ +N + T + +F +++ H ++E Sbjct: 287 VCNKIDQMRFEALSEHHQNMINTAVEETKAKFFTMSNHSEENVMEV 332 >gi|145239267|ref|XP_001392280.1| GTP-dependent nucleic acid-binding protein engD [Aspergillus niger CBS 513.88] gi|134076786|emb|CAK39841.1| unnamed protein product [Aspergillus niger] Length = 394 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST ++T++ A++P+ T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITKSSLGNPANFPYATIDPEEARVIVPDDRFDWLCEHYKPKSQV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ I D Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPIRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L+ + ELR K IE V Sbjct: 144 -LTIISEELRIKDIEFV 159 >gi|297620002|ref|YP_003708107.1| small GTP-binding protein [Methanococcus voltae A3] gi|297378979|gb|ADI37134.1| small GTP-binding protein [Methanococcus voltae A3] Length = 370 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 42/88 (47%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +G P+ GKST L +T A ++ Y FTTL G+++ + + D PGII Sbjct: 63 ATVAFVGFPSVGKSTLLNKLTNANSEVGAYAFTTLTIIPGLMEHKGAKIQVLDAPGIISG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSAL 247 A G G G L +++ IV Sbjct: 123 ASFGRGRGSEVLAAVRNVDLIMVIVDVF 150 >gi|47228156|emb|CAF97785.1| unnamed protein product [Tetraodon nigroviridis] Length = 634 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 14/181 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYRYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + +R + L H+ +A+ + + QC + +L +NS K I+ Sbjct: 230 --LEERNTIEMQAITALAHLRAAVLYVMDVSEQCGHTLQQQLELFNSIRPLFTNKPLIIV 287 Query: 278 LSQIDTVDSDTLARKKNEL---ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 ++ D D L+ + ++ T G E S++T G+ Q+ D++ + R E + Sbjct: 288 ANKCDVKKIDELSEENQKIFADLTAEGIPVIETSTLTEEGVMQVKTEACDRLLATRVETK 347 Query: 335 F 335 Sbjct: 348 M 348 >gi|312876388|ref|ZP_07736373.1| GTP-binding proten HflX [Caldicellulosiruptor lactoaceticus 6A] gi|311796882|gb|EFR13226.1| GTP-binding proten HflX [Caldicellulosiruptor lactoaceticus 6A] Length = 509 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 26/174 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA- 220 + IIG NAGKST + +++A + D F TL V KEF+L D G I+N Sbjct: 353 VSIIGYTNAGKSTLMNRISKADVLVEDKLFATLDTTTRRVYHKGKEFLLTDTVGFIRNLP 412 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRK---KI 273 H L+ + ++++L++V + ++++ + + +L +L A N L + KI Sbjct: 413 HHLVEAFSSTLEEVKYSNLILNVVDISDPYYYDHIKVS-EDLLKQLGAENIPLIRVYNKI 471 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILECLHDKI 326 + V LS +D D+ VP F S+ G GI +L+ + ++I Sbjct: 472 DKVDLSSVDVFDN----------------VPHVFISAQDGRGIDTLLDMIVERI 509 >gi|313125300|ref|YP_004035564.1| GTPase [Halogeometricum borinquense DSM 11551] gi|312291665|gb|ADQ66125.1| predicted GTPase [Halogeometricum borinquense DSM 11551] Length = 324 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 12/93 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ VTRA +IA YPFTT +G + + + D PG++ Sbjct: 159 IVVAGYPNVGKSSFVNHVTRASNEIARYPFTTKGVQIGHFERDRIRYQIIDTPGLLDRPE 218 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 + +R + VSALE AA Sbjct: 219 E------------DRNDIEKQAVSALEHLADAA 239 >gi|312091424|ref|XP_003146974.1| developmentally regulated GTP-binding protein 1 [Loa loa] gi|307757863|gb|EFO17097.1| developmentally regulated GTP-binding protein 1 [Loa loa] Length = 313 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 48/90 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A I + G P+ GKST L ++ ++A Y FTTL G+++ + L D+PGII+ Sbjct: 1 LAIIFLPGFPSVGKSTLLCNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKMQLLDLPGIIE 60 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + ++L ++ ++ Sbjct: 61 GAKDGKGRGRQVIAVARTCSLILMVLDVMK 90 >gi|282162929|ref|YP_003355314.1| GTP-binding protein [Methanocella paludicola SANAE] gi|282155243|dbj|BAI60331.1| GTP-binding protein [Methanocella paludicola SANAE] Length = 362 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 38/68 (55%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST + +T A ++ Y FTTL GI++ + D+PG++K Sbjct: 64 ATVTLVGFPSVGKSTLINKLTDAHSEVGSYDFTTLDVIPGIMEYKQARIQVLDLPGLVKG 123 Query: 220 AHQGAGIG 227 A G G G Sbjct: 124 ASSGRGRG 131 >gi|154277404|ref|XP_001539543.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150413128|gb|EDN08511.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 344 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 14/97 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK---------IADYPFTT---LYPNLGIVKEGYKEFI 209 IG++G P++GKST L S T P+ A F PN G EG + Sbjct: 7 IGLVGKPSSGKSTTLNSFTTIDPQRAIGYLQVDCACKRFNVSDKCKPNYGGCHEGRRSVP 66 Query: 210 --LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 L D+ G++ AH+G G+G++FL L+H+V Sbjct: 67 IELLDVAGLVPGAHEGKGLGNKFLDDLRHADALVHVV 103 >gi|294634454|ref|ZP_06712990.1| GTP-binding protein HflX [Edwardsiella tarda ATCC 23685] gi|291092164|gb|EFE24725.1| GTP-binding protein HflX [Edwardsiella tarda ATCC 23685] Length = 426 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 6/108 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T A AD F TL P L V+ + +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNTLTTASVYAADQLFATLDPTLRRVEVDDVGATVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILD 260 ++ H L T + +LLH+V A ++EN+ A + D Sbjct: 257 RHLPHDLVAAFKATLLETRQASLLLHVVDASDARVDENINAVNTVLAD 304 >gi|332796801|ref|YP_004458301.1| GTP binding protein [Acidianus hospitalis W1] gi|332694536|gb|AEE94003.1| GTP binding protein [Acidianus hospitalis W1] Length = 329 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 29/163 (17%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKST ++ ++ AKP+IA+YPFTT ++G F DI GI Sbjct: 163 IAGSPNVGKSTLVSKISSAKPEIANYPFTTKEIHVG-------HF---DINGIKVQVIDT 212 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD--ELSAYNSE-----LRKKIE-- 274 GI DR +K ER + ++A+ +N+ + D + S Y+ + LR+ +E Sbjct: 213 PGILDRPMK--ERNQIERKAINAI-KNLNGIIVFLFDISQQSLYSPKEQFDLLREILEFN 269 Query: 275 ---IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHG 314 I+ L++ID+ D A E++ + F I+ Sbjct: 270 KNAIIALNKIDSKDEKLYA----EVSKMLRENSLNFMEISAEN 308 >gi|308069362|ref|YP_003870967.1| GTP-binding protein hflX [Paenibacillus polymyxa E681] gi|305858641|gb|ADM70429.1| GTP-binding protein hflX [Paenibacillus polymyxa E681] Length = 428 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 5/111 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST L +T A I + F TL P ++ KE IL D G I Sbjct: 207 IVQVALVGYTNAGKSTLLKQLTAADVYIENQLFATLDPTSRTMELPSGKEVILTDTVGFI 266 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA---LEENVQAAYQCILDELSA 264 +N H L+ H++LH+V A + + + IL +L A Sbjct: 267 QNLPHDLVASFRATLEEANEAHLILHVVDASSDMRDEQMKVVETILQQLGA 317 >gi|302871403|ref|YP_003840039.1| GTP-binding proten HflX [Caldicellulosiruptor obsidiansis OB47] gi|302574262|gb|ADL42053.1| GTP-binding proten HflX [Caldicellulosiruptor obsidiansis OB47] Length = 509 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 26/174 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + IIG NAGKST + +++A + D F TL V +EF+L D G I+N Sbjct: 353 VSIIGYTNAGKSTLMNRISKADVLVEDKLFATLDTTTRRVYHKGREFLLTDTVGFIRNLP 412 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRK---KI 273 H L+ + ++++L++V + ++++ + + +L +L A N L + KI Sbjct: 413 HHLVEAFSSTLEEVKYSNLILNVVDISDPYYYDHIKVS-EDLLKQLGAENIPLIRVYNKI 471 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILECLHDKI 326 + V +S +D D+ VP+ F S+ G GI +L+ + ++I Sbjct: 472 DKVDISSVDVFDN----------------VPYVFVSAQDGRGIDTLLDMIVERI 509 >gi|170288211|ref|YP_001738449.1| GTP-binding protein HflX [Thermotoga sp. RQ2] gi|170175714|gb|ACB08766.1| GTP-binding protein HflX [Thermotoga sp. RQ2] Length = 420 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 7/114 (6%) Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPG 215 K I + I+G NAGKST L S+T + IAD F TL P +K + K +++D G Sbjct: 198 KKIPHVSIVGYTNAGKSTLLKSLTESDVYIADKLFATLEPVTRRLKLKSGKIILVSDTVG 257 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSA 264 I+ H L+ + + VL+H+V A LEE ++A+ + +L+E+ A Sbjct: 258 FIRKLPHTIVSAFKATLEEIKYSDVLIHLVDASDPYLEEKMKAS-ERVLEEIGA 310 >gi|320101456|ref|YP_004177048.1| small GTP-binding protein [Desulfurococcus mucosus DSM 2162] gi|319753808|gb|ADV65566.1| small GTP-binding protein [Desulfurococcus mucosus DSM 2162] Length = 338 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 8/156 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNA 220 + I G+P GKST L+ +TRA+P I YPFTT +G I + +L D PGI+ Sbjct: 164 VVIAGVPQVGKSTLLSKLTRARPVIGSYPFTTRNIIVGHIDVDEAGRIVLIDSPGILDTP 223 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR----KKIEIV 276 + I ++ + H+ H++ ++ N + Y + ++L + R K + +V Sbjct: 224 LEEKNIVEKRAVLALK-HLADHLLFVIDAN-PSFYYSLEEQLRVLETARRLVEGKPVTLV 281 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITG 312 ++++D++ + + + ++ G P S++ G Sbjct: 282 -VNKVDSLPKELVEEVVESVESKTGLKPIPVSALLG 316 >gi|312137475|ref|YP_004004812.1| small gtp-binding protein [Methanothermus fervidus DSM 2088] gi|311225194|gb|ADP78050.1| small GTP-binding protein [Methanothermus fervidus DSM 2088] Length = 335 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 35/56 (62%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + I G PN GKST L +T A P++A+YPFTT +G K G+ + + D PG++ Sbjct: 165 VVIAGYPNVGKSTLLRKLTGANPEVAEYPFTTKGIQIGYRKIGWGKLQVVDTPGLL 220 >gi|160900445|ref|YP_001566027.1| GTP-binding proten HflX [Delftia acidovorans SPH-1] gi|160366029|gb|ABX37642.1| GTP-binding proten HflX [Delftia acidovorans SPH-1] Length = 404 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 21/187 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFILADIPGI 216 I +I ++G NAGKST ++ +A+ AD F TL + E + L+D G Sbjct: 201 IFNISLVGYTNAGKSTLFNALVKARAYAADQLFATLDTTTRQLYLNEAQQSVSLSDTVGF 260 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSEL 269 I++ G+ D F L+ +LLH+V A E +Q Q +L E+ A L Sbjct: 261 IRDLPH--GLVDAFQATLQEAIDADLLLHVVDASNPNFPEQIQQV-QKVLKEIGAQEVPL 317 Query: 270 RKKIEIVGLSQIDTVDSDTL-ARKKNELATQCGQVPFEF-SSITGHGIPQILECLHDKIF 327 ++ +++D VD + L A+ +++ V F S+ +G G+PQ+ + L + Sbjct: 318 -----VLVFNKLDAVDPERLPAQLQDQYELDGLPVSRVFVSARSGEGLPQLRQLLAEH-- 370 Query: 328 SIRGENE 334 ++R E E Sbjct: 371 ALRAEAE 377 >gi|289642427|ref|ZP_06474573.1| GTP-binding proten HflX [Frankia symbiont of Datisca glomerata] gi|289507772|gb|EFD28725.1| GTP-binding proten HflX [Frankia symbiont of Datisca glomerata] Length = 464 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 21/176 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 I + I G NAGKS+ L +T A + D F TL P + + +G + F LAD G Sbjct: 242 IPAVAITGYTNAGKSSLLNRLTGAGVLVEDALFATLDPAVRRATLPDG-RTFTLADTVGF 300 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKK 272 +++ HQ L+ ++LLH+V + +A + +++++ A + Sbjct: 301 VRHLPHQIVEAFRSTLEEVADANLLLHVVDGSHPDPMSQISAVRTVINDIGAGDVP---- 356 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKI 326 E++ +++ID D D LAR + VP S+ TG G+ ++E L +++ Sbjct: 357 -ELLVVNKIDAADPDVLARVRR-------TVPDAILVSARTGDGLTALVEELTERV 404 >gi|39971641|ref|XP_367211.1| hypothetical protein MGG_07136 [Magnaporthe oryzae 70-15] gi|145019609|gb|EDK03837.1| hypothetical protein MGG_07136 [Magnaporthe oryzae 70-15] Length = 659 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 32/54 (59%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL SVTRA + Y FTT +G + Y +F + D PGI+ Sbjct: 172 IAGFPNVGKSSFLKSVTRADVDVQPYAFTTKSLFVGHLDYKYLKFQVIDTPGIL 225 >gi|86131593|ref|ZP_01050191.1| GTP-binding protein Era [Dokdonia donghaensis MED134] gi|85818038|gb|EAQ39206.1| GTP-binding protein Era [Dokdonia donghaensis MED134] Length = 294 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 20/166 (12%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + A V I TT + LGIV + IL+D PGIIK A Sbjct: 8 VNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQMILSDTPGIIKPA 67 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR-KKIEIVGL 278 ++ F+K E VLL+IV E+ ++ DE A+ +++R KI ++ L Sbjct: 68 YELQASMMDFVKSAFEDADVLLYIVELGEKELK-------DE--AFFNKIRGAKIPVLLL 118 Query: 279 -SQIDTVDSDTLARKKNELATQCGQVP----FEFSSITGHGIPQIL 319 ++ID + + L L +VP F S++ G+PQ+ Sbjct: 119 INKIDKGNEEMLGEA---LKLWSEKVPNAEVFAISALENFGVPQVF 161 >gi|294101436|ref|YP_003553294.1| GTP-binding protein YchF [Aminobacterium colombiense DSM 12261] gi|293616416|gb|ADE56570.1| GTP-binding protein YchF [Aminobacterium colombiense DSM 12261] Length = 363 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLP GKST +TRA ++ Y PN +V K+ Sbjct: 5 GIVGLPLCGKSTVFNVITRAGAEVKPYASGKTDPNRAMVSVPDPRFEHLVTIFEPKKQTP 64 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 D+ G+ ++A +GAG+G+ FL + L+H+V + Sbjct: 65 ATVEFVDLAGLSRDASKGAGLGNAFLSFVAESDALVHVVRTFD 107 >gi|294941055|ref|XP_002782990.1| Developmentally-regulated GTP-binding protein, putative [Perkinsus marinus ATCC 50983] gi|239895172|gb|EER14786.1| Developmentally-regulated GTP-binding protein, putative [Perkinsus marinus ATCC 50983] Length = 370 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G+IG P+ GKST L +T + A Y FTTL G+ + + D+PGII+ Sbjct: 64 ARVGLIGFPSVGKSTLLNKLTGTFSEAAAYEFTTLTCVPGVYTYKGAKVQVLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + ++L + + Q + I EL + L KK + ++ Sbjct: 124 AKDGKGRGKQVISVAMTCSLILVCLDVTKPLTQK--RKIEHELEGFGMRLNKKAPNIIIT 181 Query: 280 QID 282 + D Sbjct: 182 KAD 184 >gi|225439276|ref|XP_002265256.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 535 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 1/60 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G PN GKS+ + ++ KP++ +YPFTT +G + Y+ F + D PG++ N H Sbjct: 339 LCLVGAPNVGKSSLVRVLSTGKPEVCNYPFTTRGILMGHIAFNYRHFQVTDTPGLL-NRH 397 >gi|126460613|ref|YP_001056891.1| small GTP-binding protein [Pyrobaculum calidifontis JCM 11548] gi|126250334|gb|ABO09425.1| small GTP-binding protein [Pyrobaculum calidifontis JCM 11548] Length = 348 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 9/77 (11%) Query: 148 QEKIIWLKLKL------IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-I 200 +E +I+L+ KL + I + G PN GKS+F+ V+ A+P++A+YPFTT +LG I Sbjct: 154 REVVIYLR-KLPSVDPTLFTIAVAGAPNVGKSSFVRCVSTAEPEVAEYPFTTKQIHLGHI 212 Query: 201 VKEGYKEFILADIPGII 217 + +G K I+ D PG++ Sbjct: 213 ILKGDKVQIV-DTPGLL 228 >gi|327292835|ref|XP_003231115.1| GTP-binding protein YchF [Trichophyton rubrum CBS 118892] gi|326466745|gb|EGD92198.1| GTP-binding protein YchF [Trichophyton rubrum CBS 118892] Length = 393 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------KEG 204 GI+GL N GKST ++T++ A++P+ T+ P V E Sbjct: 24 GIVGLANVGKSTLFQAITKSTLGNPANFPYATIDPEQARVIVPDERYDWLCKHYKPKSEV 83 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ K A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 84 PANLTVYDIAGLTKGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIVHVEGDVDPVRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L+ + ELR K IE V Sbjct: 144 -LNIISEELRIKDIEFV 159 >gi|237737545|ref|ZP_04568026.1| GTP-binding protein [Fusobacterium mortiferum ATCC 9817] gi|229419425|gb|EEO34472.1| GTP-binding protein [Fusobacterium mortiferum ATCC 9817] Length = 298 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 9/165 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST + + K I T N+ GI+ ++I D PGI K Sbjct: 6 IAVVGRPNVGKSTLINKLVSEKVAIVSDKAGTTRDNIKGILNFNDNQYIFIDTPGIHKAK 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H G + + ++ + V+L ++ +E + Q +++++ E ++ I+ ++ Sbjct: 66 HLLGEYMTNSAIRVLKDVDVILFVLDGSQE-ISTGDQFVMEKV----KEAKRTPRILVVN 120 Query: 280 QIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECL 322 +ID ++ + L K+ E+ + G+ E S G+P++LE + Sbjct: 121 KIDKLNDEQLKAKRLEIEEKLGEFDGIVEISGQYAIGLPKLLEKI 165 >gi|323702876|ref|ZP_08114534.1| GTP-binding protein YchF [Desulfotomaculum nigrificans DSM 574] gi|323532134|gb|EGB22015.1| GTP-binding protein YchF [Desulfotomaculum nigrificans DSM 574] Length = 366 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTR-----------------AKPKIADYPFTTLYPNLGIVKEGY 205 GIIGLP GK+T +T A K+ D L K Y Sbjct: 8 GIIGLPMVGKTTIFNLLTNSDQEISNFFSGKTETITASAKVPDKRINFLADMYKPRKTTY 67 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 + +++PG++K A +G G+G++FL +L+H+V A + Sbjct: 68 AQIQFSEVPGLVKGASEGKGVGNQFLSAIRNVDLLVHVVRAFK 110 >gi|224067405|ref|XP_002302481.1| predicted protein [Populus trichocarpa] gi|222844207|gb|EEE81754.1| predicted protein [Populus trichocarpa] Length = 356 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 37/61 (60%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G PN GKS+ + ++ KP++ +YPFTT +G + ++ F + D PG++K Sbjct: 160 LCLVGAPNVGKSSLVRVLSTGKPEVCNYPFTTRGILMGHIALNFQHFQVTDTPGLLKRCD 219 Query: 222 Q 222 + Sbjct: 220 E 220 >gi|170744002|ref|YP_001772657.1| GTP-binding proten HflX [Methylobacterium sp. 4-46] gi|168198276|gb|ACA20223.1| GTP-binding proten HflX [Methylobacterium sp. 4-46] Length = 474 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 9/175 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILADIPGIIKNA 220 + ++G NAGKST +T A+ + D F TL P +K + E IL+D G I + Sbjct: 237 VALVGYTNAGKSTLFNRLTEAEVRAEDMLFATLDPTARAIKLPHGETAILSDTVGFISDL 296 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIV 276 R L+ +LLH+ E+ QA Q +L EL + + IE+ Sbjct: 297 PTMLIAAFRATLEDVIEADILLHVRDMAHEDTQAQGEDVQAVLAELG-IAPQADRIIEV- 354 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 ++ D + + R N L+ Q G P S++TG G +L + +I R Sbjct: 355 -WNKADLLGPEERERLLN-LSRQTGTRPVLISALTGEGTDALLARIEGRIAESRA 407 >gi|332304698|ref|YP_004432549.1| GTP-binding proten HflX [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172027|gb|AEE21281.1| GTP-binding proten HflX [Glaciecola agarilytica 4H-3-7+YE-5] Length = 432 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 7/112 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T+++ AD F TL P L ++ + ILAD G I Sbjct: 197 IPTLALVGYTNAGKSTLFNTITQSEVYAADQLFATLDPTLRRIELQDVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIV----SALEENVQAAYQCILDELSA 264 ++ H L+ T++ +LLH+V EN+ + +LDE+ + Sbjct: 257 RHLPHDLVAAFKATLQETQQADLLLHVVDYSDDQFRENIDQVNE-VLDEIDS 307 >gi|284162668|ref|YP_003401291.1| small GTP-binding protein [Archaeoglobus profundus DSM 5631] gi|284012665|gb|ADB58618.1| small GTP-binding protein [Archaeoglobus profundus DSM 5631] Length = 304 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 1/57 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + G PN GKS+F+A V+ KP+IA YPFTT ++G ++ E K + D PG++ Sbjct: 156 VVVAGYPNVGKSSFVAKVSTVKPEIASYPFTTKSIHVGYIELERGKRIQIIDTPGLL 212 >gi|258516725|ref|YP_003192947.1| GTP-dependent nucleic acid-binding protein EngD [Desulfotomaculum acetoxidans DSM 771] gi|257780430|gb|ACV64324.1| GTP-binding protein YchF [Desulfotomaculum acetoxidans DSM 771] Length = 364 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 17/103 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK------ 206 +IGLP GK+T +T + +I+++ + G+ K E YK Sbjct: 6 ALIGLPLVGKTTLFNLLTGSSMEISEFFSGKTETSTGMAKIPDRRIRYLSEMYKPKKTTF 65 Query: 207 -EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 E ++D+PG+++ A QG G+G++FL +L+ +V A E Sbjct: 66 AEIQISDVPGLVRGASQGKGVGNQFLNAIRNVEILVQVVRAFE 108 >gi|331003853|ref|ZP_08327345.1| GTP-binding protein HflX [Lachnospiraceae oral taxon 107 str. F0167] gi|330412045|gb|EGG91442.1| GTP-binding protein HflX [Lachnospiraceae oral taxon 107 str. F0167] Length = 415 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 27/175 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN 219 ++ I+G NAGKST L +T A D F TL P +K G +E ++ D G I+ Sbjct: 200 NVAIVGYTNAGKSTLLNKLTDAGILAEDKLFATLDPTTRKLKLGSGQEILVTDTVGFIRK 259 Query: 220 A-HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 H L+ + ++L+H+V A E + + D L + Sbjct: 260 LPHHLIEAFKSTLEEAKYANLLIHMVDAANEEATSQMLVVYDTLRS-------------- 305 Query: 279 SQIDTVDSDTLAR-KKNELATQCGQVPFEF--------SSITGHGIPQILECLHD 324 +D VD D + K +L + ++P +F S+ TG GI ++ + D Sbjct: 306 --LDVVDKDIITVFNKTDLMEEGMELPRDFHADKVLKMSAKTGEGIDELKNTIED 358 >gi|325191967|emb|CCA26436.1| developmentallyregulated GTPbinding protein 1 putat [Albugo laibachii Nc14] Length = 368 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 46/87 (52%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +G++G P+ GKST L +T + A Y FTTL G + + D+PGII+ A Sbjct: 67 VGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTAIPGTLHYRGARIQILDLPGIIEGAK 126 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALE 248 G G G + + +++L ++ A++ Sbjct: 127 DGKGRGRQVIGTARTCNLILIVLDAMK 153 >gi|292656054|ref|YP_003535951.1| GTP-binding protein [Haloferax volcanii DS2] gi|291370085|gb|ADE02312.1| GTP-binding protein [Haloferax volcanii DS2] Length = 325 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 12/87 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ VTRA +IA YPFTT +G + + D PG++ Sbjct: 160 IVVAGYPNVGKSSFVNDVTRASNEIARYPFTTKGVQIGHFDRDRIRYQIIDTPGLL---- 215 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALE 248 DR ER + VSALE Sbjct: 216 ------DR--PEDERNDIERQAVSALE 234 >gi|237809127|ref|YP_002893567.1| GTP-binding proten HflX [Tolumonas auensis DSM 9187] gi|237501388|gb|ACQ93981.1| GTP-binding proten HflX [Tolumonas auensis DSM 9187] Length = 429 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 5/111 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +T++K AD F TL P L ++ E +LAD G I Sbjct: 197 IPVVSLVGYTNAGKSTLFNRMTQSKVYAADQLFATLDPTLRRIELERLGPVVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSA 264 ++ H L+ T + LH++ +E VQ A +L E+ A Sbjct: 257 RHLPHDLVAAFKATLQETREADLQLHVIDCADERVQDNMAQVNEVLHEIEA 307 >gi|225682769|gb|EEH21053.1| GTP-dependent nucleic acid-binding protein engD [Paracoccidioides brasiliensis Pb03] gi|226290215|gb|EEH45699.1| GTP-dependent nucleic acid-binding protein engD [Paracoccidioides brasiliensis Pb18] Length = 394 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLG--IVKEGYKEFI---------- 209 GI+GL N GKST ++T+ A++PF T+ P IV + +++ Sbjct: 24 GIVGLANVGKSTLFQAITKCSLGNPANFPFATIDPEEARVIVPDARYDWLCEHYNPKSRV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPVRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L+ + ELR K IE V Sbjct: 144 -LNIISEELRIKDIEFV 159 >gi|297527145|ref|YP_003669169.1| small GTP-binding protein [Staphylothermus hellenicus DSM 12710] gi|297256061|gb|ADI32270.1| small GTP-binding protein [Staphylothermus hellenicus DSM 12710] Length = 389 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/55 (43%), Positives = 35/55 (63%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIP 214 A I +IGLPN+GKST + +T + +IA+YPF+T P G+++ F L D P Sbjct: 82 AQIVVIGLPNSGKSTLVKQLTGTRTRIANYPFSTDRPVPGMLRYQDIYFQLVDTP 136 >gi|50291855|ref|XP_448360.1| hypothetical protein [Candida glabrata CBS 138] gi|49527672|emb|CAG61321.1| unnamed protein product [Candida glabrata] Length = 427 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 24/141 (17%) Query: 130 FKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKP-KIAD 188 K +TN+ P IL LK+ GI+GL N GKSTF ++T + A+ Sbjct: 1 MKPTTNKKAKMKLPNILDA-----LKVTNNPTSGIVGLANVGKSTFFQTITNSHLGTAAN 55 Query: 189 YPFTTL----------YPNLGIVKEGYKE-------FILADIPGIIKNAHQGAGIGDRFL 231 YP+ T+ P L ++++ Y+ + DI G+ + A +G G+G++FL Sbjct: 56 YPYATIDPEVAKVPIPSPELPVLQKLYQSGKVIPAALTIYDIAGLTRGASEGHGLGNKFL 115 Query: 232 KHTERTHVLLHIVSAL-EENV 251 + ++V +EN+ Sbjct: 116 SDIRHVDGIFNLVRGFKDENI 136 >gi|288930677|ref|YP_003434737.1| small GTP-binding protein [Ferroglobus placidus DSM 10642] gi|288892925|gb|ADC64462.1| small GTP-binding protein [Ferroglobus placidus DSM 10642] Length = 313 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 35/56 (62%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + + G PN GKS+ +A ++ KP++A YPFTT ++G V++ + D PGI+ Sbjct: 157 VVLAGYPNVGKSSIIAEISSVKPEVASYPFTTKKISVGFVEDKDVRIQVIDTPGIL 212 >gi|222479215|ref|YP_002565452.1| small GTP-binding protein [Halorubrum lacusprofundi ATCC 49239] gi|222452117|gb|ACM56382.1| small GTP-binding protein [Halorubrum lacusprofundi ATCC 49239] Length = 371 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 5/111 (4%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST + ++T A ++ Y FTTL N G+++ + D+PG+I+ Sbjct: 63 ATVALVGFPSVGKSTLINALTNADSEVGSYEFTTLDVNPGMLQYRGANIQILDVPGLIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR 270 A G G G L +++ ++S E Y + +EL YN+ +R Sbjct: 123 AAGGRGGGKEVLSVVRTADLVVFMLSVFE---IEQYDRLREEL--YNTNIR 168 >gi|70995164|ref|XP_752347.1| GTP-binding protein YchF [Aspergillus fumigatus Af293] gi|66849982|gb|EAL90309.1| GTP-binding protein YchF [Aspergillus fumigatus Af293] gi|159131104|gb|EDP56217.1| GTP-binding protein YchF [Aspergillus fumigatus A1163] Length = 394 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST ++T++ A++P+ T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITKSSLGNPANFPYATIDPEEARVIVPDERFDWLCEHYKPKSQV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPVRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L+ + ELR K IE V Sbjct: 144 -LTIISEELRIKDIEFV 159 >gi|296089292|emb|CBI39064.3| unnamed protein product [Vitis vinifera] Length = 456 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 1/60 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G PN GKS+ + ++ KP++ +YPFTT +G + Y+ F + D PG++ N H Sbjct: 249 LCLVGAPNVGKSSLVRVLSTGKPEVCNYPFTTRGILMGHIAFNYRHFQVTDTPGLL-NRH 307 >gi|320582493|gb|EFW96710.1| GTP-binding protein [Pichia angusta DL-1] Length = 395 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 22/107 (20%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTLYP----------NLGIVKEGYKE-- 207 GI+GL N GKSTF ++TR P A+YPF T+ P L + E YK Sbjct: 24 GIVGLANVGKSTFFQAITRCPLGNP--ANYPFATIEPEEARVIVPSERLDKLYELYKPPK 81 Query: 208 -----FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+ K A G G+G+ FL + + +V ++ Sbjct: 82 KVPAYITIYDIAGLTKGAAAGEGLGNAFLSNIRAVDAIYQVVRCFDD 128 >gi|294944505|ref|XP_002784289.1| Developmentally-regulated GTP-binding protein, putative [Perkinsus marinus ATCC 50983] gi|239897323|gb|EER16085.1| Developmentally-regulated GTP-binding protein, putative [Perkinsus marinus ATCC 50983] Length = 370 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 2/123 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G+IG P+ GKST L +T + A Y FTTL G+ + + D+PGII+ Sbjct: 64 ARVGLIGFPSVGKSTLLNKLTGTFSEAAAYEFTTLTCVPGVYTYKGAKVQVLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A G G G + + ++L + + Q + I EL + L KK + ++ Sbjct: 124 AKDGKGRGKQVISVAMTCSLILICLDVTKPLTQK--RKIEHELEGFGMRLNKKAPNIIIT 181 Query: 280 QID 282 + D Sbjct: 182 KAD 184 >gi|169619002|ref|XP_001802914.1| hypothetical protein SNOG_12693 [Phaeosphaeria nodorum SN15] gi|160703725|gb|EAT79991.2| hypothetical protein SNOG_12693 [Phaeosphaeria nodorum SN15] Length = 630 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 17/183 (9%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL S++RA ++ Y FTT +G F D PGI+ +A + Sbjct: 156 IAGFPNVGKSSFLKSISRADVEVQPYAFTTKSLYVGHFDYKMLRFQAVDTPGILDHALEE 215 Query: 224 AGIGDRFLKHTE---RTHVLLHIVSALEENVQAAYQCILDELSAYNSE----LRKKIEIV 276 ++H H+ HI+ ++ + Q Y + +++ +N+ K I IV Sbjct: 216 MNT----IEHQSICAIAHLRAHILYFMDLSEQCGY-SVASQIALFNNIKPLFANKLISIV 270 Query: 277 GLSQIDTVDSDTL-ARKKNEL--ATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIRGE 332 +++ID + D L A + +L + G+V E S T G+ + + D++ + R Sbjct: 271 -INKIDLMRPDQLDAETQEQLQGMLKSGEVEILELSCNTMEGVMAVRNSVCDRLIAARNA 329 Query: 333 NEF 335 + Sbjct: 330 EKL 332 >gi|109900278|ref|YP_663533.1| GTP-binding protein, HSR1-related [Pseudoalteromonas atlantica T6c] gi|109702559|gb|ABG42479.1| GTP-binding protein HflX [Pseudoalteromonas atlantica T6c] Length = 432 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 7/112 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T+++ AD F TL P L ++ + ILAD G I Sbjct: 197 IPTLALVGYTNAGKSTLFNTITQSEVYAADQLFATLDPTLRRIELQDVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIV----SALEENVQAAYQCILDELSA 264 ++ H L+ T++ +LLH+V EN+ + +LDE+ + Sbjct: 257 RHLPHDLVAAFKATLQETQQADLLLHVVDYSDDQFRENIDQVNE-VLDEIDS 307 >gi|89053015|ref|YP_508466.1| GTP-binding protein Era [Jannaschia sp. CCS1] gi|88862564|gb|ABD53441.1| GTP-binding protein Era [Jannaschia sp. CCS1] Length = 312 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 33/181 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGI---- 216 I +IG PNAGKST L + AK I + T + G+ EG + + D PG+ Sbjct: 18 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGDSQLVFVDTPGLFRPR 77 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 +K A GA D + +L+ L + VQA ILD L + Sbjct: 78 RRLDRAMVKAAWTGAADADVVV-------LLIEAHRGLTDGVQA----ILDGLKERTGD- 125 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHDK 325 +K+ + +++ID VD+ L + +L PF+ S+ GHG+ ++ L + Sbjct: 126 -RKVAL-AINKIDRVDAPVLLKLTEDL---NAAYPFDETYMISAEKGHGVKELRTWLAAE 180 Query: 326 I 326 + Sbjct: 181 V 181 >gi|119496025|ref|XP_001264786.1| GTP-binding protein YchF [Neosartorya fischeri NRRL 181] gi|119412948|gb|EAW22889.1| GTP-binding protein YchF [Neosartorya fischeri NRRL 181] Length = 394 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST ++T++ A++P+ T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITKSSLGNPANFPYATIDPEEARVIVPDERFDWLCEHYKPKSQV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPVRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L+ + ELR K IE V Sbjct: 144 -LTIISEELRIKDIEFV 159 >gi|154151388|ref|YP_001405006.1| small GTP-binding protein [Candidatus Methanoregula boonei 6A8] gi|153999940|gb|ABS56363.1| small GTP-binding protein [Methanoregula boonei 6A8] Length = 371 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 5/107 (4%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 ++G P+ GKST L +T +A Y FTTL G ++ + L DIPG+I A G Sbjct: 69 LVGFPSTGKSTLLNKLTGTDSAVAAYAFTTLTVVPGALEHKGAKIQLLDIPGLIAGAAMG 128 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR 270 G G + +++ +V E + +L EL Y++ +R Sbjct: 129 KGRGKEVIGVVRSADIIIILVDVFNER---HVEVLLKEL--YDAGIR 170 >gi|160872143|ref|ZP_02062275.1| GTP-binding proten HflX [Rickettsiella grylli] gi|159120942|gb|EDP46280.1| GTP-binding proten HflX [Rickettsiella grylli] Length = 366 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 1/86 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 I ++G N GKST +T++ IA+ PF TL P++ + K ILAD G I++ Sbjct: 200 ISLVGYTNTGKSTLFNRLTQSNVLIANQPFATLDPSIRRMSLNGKIAILADTVGFIRHLP 259 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA 246 H L+ T+ +LLH+V A Sbjct: 260 HHLIAAFRATLEETQHADLLLHVVDA 285 >gi|310642424|ref|YP_003947182.1| gtp-binding proten hflx [Paenibacillus polymyxa SC2] gi|309247374|gb|ADO56941.1| GTP-binding proten HflX [Paenibacillus polymyxa SC2] Length = 428 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 5/111 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST L +T A I + F TL P ++ KE IL D G I Sbjct: 207 IVQVALVGYTNAGKSTLLKQLTAADVYIENQLFATLDPTSRTMELPSGKEVILTDTVGFI 266 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA---LEENVQAAYQCILDELSA 264 +N H L+ H++LH+V A + + + IL +L A Sbjct: 267 QNLPHDLVASFRATLEEANEAHLILHVVDASSDMRDEQMKVVESILQQLGA 317 >gi|254363116|ref|ZP_04979170.1| GTP-binding protein HflX [Mannheimia haemolytica PHL213] gi|153095003|gb|EDN75566.1| GTP-binding protein HflX [Mannheimia haemolytica PHL213] Length = 456 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 7/114 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T+A AD F TL P L ++ + ILAD G I Sbjct: 222 IPTVSLVGYTNAGKSTLFNAITQAGVYAADQLFATLDPTLRRIQVQDVGTTILADTVGFI 281 Query: 218 K-NAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYN 266 + H L+ T +LLH++ + EN+ A Q +LDE+ A + Sbjct: 282 RFLPHDLVSAFKSTLQETTEATLLLHVIDGSDERKNENIDAVNQ-VLDEIGALD 334 >gi|328857077|gb|EGG06195.1| hypothetical protein MELLADRAFT_74871 [Melampsora larici-populina 98AG31] Length = 363 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 2/114 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G +G P+ GKS+ ++ +T +A Y FTTL G + + D+PGII+ Sbjct: 64 VASVGFVGFPSVGKSSLMSGLTGTVSAVAAYEFTTLTTVPGTMNVRGAAVQILDLPGIIE 123 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G R + +R+ LL IV + + + + I +EL + L KK Sbjct: 124 GAKDGKGRG-RQVIAVDRSCNLLFIVLDVLKPLDDK-RIIENELEGFGIRLNKK 175 >gi|328554264|gb|AEB24756.1| GTPase Era [Bacillus amyloliquefaciens TA208] gi|328912661|gb|AEB64257.1| GTP-binding protein [Bacillus amyloliquefaciens LL3] Length = 301 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 21/167 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D P TT G++ G + I D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++L +++A EE + I+++L ++ + + Sbjct: 71 HK---LGDFMMKVAQNTLKEVDLVLFMINA-EEGYGKGDEFIIEKLGQTSTPV-----FL 121 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQIL 319 +++ID + D L +E T+ PF+ S++ G+ + +L Sbjct: 122 IVNKIDKIHPDQLLLLIDEYRTRY---PFKEIVPISALEGNNVETLL 165 >gi|307595158|ref|YP_003901475.1| small GTP-binding protein [Vulcanisaeta distributa DSM 14429] gi|307550359|gb|ADN50424.1| small GTP-binding protein [Vulcanisaeta distributa DSM 14429] Length = 349 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 21/175 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG---IVKEGYKEFILADIPGII- 217 I + G+PN GKS+F+ V+ KPK+A+YPFTT ++G ++ + + I D PG++ Sbjct: 170 IVVSGMPNVGKSSFVRCVSSGKPKVAEYPFTTKELHVGHFTVLNDVKVQVI--DTPGLLD 227 Query: 218 -----KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCI--LDELSAYNSELR 270 +N + I LK+ R IV L+ + Y + L+ L S Sbjct: 228 RPLSERNKIELQAI--LALKYLARV-----IVFILDPTNHSGYSLMEQLNLLREIRSSFS 280 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHD 324 ++ +++ID + + N +A G +P F S+I +G +++ + D Sbjct: 281 GTPLLLLVNKIDIATENEVNTALNSVAVIDGSIPTFRVSTINCNGCREVINYIID 335 >gi|301103290|ref|XP_002900731.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262101486|gb|EEY59538.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 315 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 35/55 (63%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 +G PN GKS+ + +++ A P++A+YPFTT +G + E + +AD PG+I Sbjct: 150 AFVGAPNVGKSSLVRALSTASPEVANYPFTTRGITMGHIFEEGISYQIADTPGLI 204 >gi|329930826|ref|ZP_08284225.1| GTP-binding protein HflX [Paenibacillus sp. HGF5] gi|328934528|gb|EGG31033.1| GTP-binding protein HflX [Paenibacillus sp. HGF5] Length = 430 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 5/110 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 I ++G NAGKST L +T A I + F TL P +++ KE +L D G I+N Sbjct: 210 IALVGYTNAGKSTLLNRLTAADVYIENQLFATLDPTSRVLELPSGKEVVLTDTVGFIQNL 269 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA---LEENVQAAYQCILDELSAYN 266 H L+ ++LH+V A + + A Q IL +L A + Sbjct: 270 PHDLVAAFRATLEEANEADLILHVVDASSPMRDEQMAVVQSILQDLGAAD 319 >gi|295669590|ref|XP_002795343.1| GTP-dependent nucleic acid-binding protein engD [Paracoccidioides brasiliensis Pb01] gi|226285277|gb|EEH40843.1| GTP-dependent nucleic acid-binding protein engD [Paracoccidioides brasiliensis Pb01] Length = 412 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLG--IVKEGYKEFI---------- 209 GI+GL N GKST ++T+ A++PF T+ P IV + +++ Sbjct: 24 GIVGLANVGKSTLFQAITKCSLGNPANFPFATIDPEEARVIVPDARYDWLCEHYNPKSRV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPVRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L+ + ELR K IE V Sbjct: 144 -LNIISEELRIKDIEFV 159 >gi|219871389|ref|YP_002475764.1| GTP-binding protein hflX [Haemophilus parasuis SH0165] gi|219691593|gb|ACL32816.1| GTP-binding protein hflX [Haemophilus parasuis SH0165] Length = 408 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 7/112 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST ++T A AD F TL P L ++ + ILAD G I Sbjct: 171 IPTISLVGYTNAGKSTLFNAITDAGVYAADQLFATLDPTLRRIQIQDVGTAILADTVGFI 230 Query: 218 K-NAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSA 264 + H L+ T +LLH++ + EN+ A Q +LDE+ A Sbjct: 231 RFLPHDLVSAFKSTLQETTEATLLLHVIDGADDRKNENIDAVNQ-VLDEIEA 281 >gi|219128028|ref|XP_002184225.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404456|gb|EEC44403.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 677 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + GLPN GKS+F+ +TR + Y FTT +G Y + + D PGI+ + Sbjct: 173 MCGLPNVGKSSFMNKITRGNVDVQPYAFTTKSLFVGHCDYKYLRWQVIDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + +R + L H+ ++ V + QC I + S + S K IV Sbjct: 230 --LEERNTIEMQAIIALAHLTCSVLYFVDISEQCGYTIDQQCSLFRSIKPLFANKQLIVV 287 Query: 278 LSQIDTVDSDTLARKKNE----LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 ++++D ++L K LA S+++ HG+ + DK+ + R Sbjct: 288 VNKVDQQPWESLEEAKRAMVQGLADDANCSLMTMSNLSEHGVSDVKAAACDKLLATR 344 >gi|119946843|ref|YP_944523.1| GTP-binding protein, HSR1-related [Psychromonas ingrahamii 37] gi|119865447|gb|ABM04924.1| GTP-binding protein, HSR1-related [Psychromonas ingrahamii 37] Length = 430 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 78/172 (45%), Gaps = 19/172 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL---GIVKEGYKEFILADIPG 215 + + ++G NAGKST +T A AD F TL P L +V G ILAD G Sbjct: 197 VPTVALVGYTNAGKSTLFNHLTDAGVYAADQLFATLDPTLRKVDVVDVG--TCILADTVG 254 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELR 270 I++ H L+ T +LLHIV + +N+ A Q +LDE+ A + Sbjct: 255 FIRHLPHDLVAAFKATLQETRDATLLLHIVDCADPSHHDNI-VAVQTVLDEIDAGDVP-- 311 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 +++ +++ID VD +EL V S+ TG G+ + E L Sbjct: 312 ---QLMIMNKIDDVDGIEPYVDFDELGK---PVKVWLSAQTGIGVELLFESL 357 >gi|308174317|ref|YP_003921022.1| GTP-binding protein [Bacillus amyloliquefaciens DSM 7] gi|307607181|emb|CBI43552.1| GTP-binding protein [Bacillus amyloliquefaciens DSM 7] Length = 301 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 21/167 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D P TT G++ G + I D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++L +++A EE + I+++L ++ + + Sbjct: 71 HK---LGDFMMKVAQNTLKEVDLVLFMINA-EEGYGKGDEFIIEKLGQTSTPV-----FL 121 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQIL 319 +++ID + D L +E T+ PF+ S++ G+ + +L Sbjct: 122 IVNKIDKIHPDQLLLLIDEYRTRY---PFKEIVPISALEGNNVETLL 165 >gi|219852174|ref|YP_002466606.1| small GTP-binding protein [Methanosphaerula palustris E1-9c] gi|219546433|gb|ACL16883.1| small GTP-binding protein [Methanosphaerula palustris E1-9c] Length = 354 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 24/183 (13%) Query: 146 LGQEKIIWLKLKLIAD---IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK 202 L Q + + KL ++D + + G PN GKS+F+ V+ A P++A YPFTT LG Sbjct: 133 LNQVRNVLRKLPHVSDEYTVVVAGYPNVGKSSFIQLVSTATPEVAAYPFTTKGVILGHRN 192 Query: 203 EGYKEFILADIPGII-KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC--IL 259 E D PGI+ + A + I + L L++I A+ + A+ C Sbjct: 193 EPAGRVQFVDTPGILDRPADERNPIEKQAL------CALMNIADAILFIIDASEHCGYQF 246 Query: 260 DELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 +E +E+ E+V + + ++ L +K+ + S+ + G+ ++L Sbjct: 247 EEQEQLRAEVE---EMVSVPMVTVINKSDLVKKEGYML---------MSTKSSEGVDEVL 294 Query: 320 ECL 322 L Sbjct: 295 TAL 297 >gi|154686789|ref|YP_001421950.1| GTP-binding protein Era [Bacillus amyloliquefaciens FZB42] gi|154352640|gb|ABS74719.1| Era [Bacillus amyloliquefaciens FZB42] Length = 301 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 21/167 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D P TT G++ G + I D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++L +++A EE + I+++L ++ + + Sbjct: 71 HK---LGDFMMKVAQNTLKEVDLVLFMINA-EEGYGKGDEFIIEKLGQTSTPV-----FL 121 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQIL 319 +++ID + D L +E T+ PF+ S++ G+ + +L Sbjct: 122 IVNKIDKIHPDQLLLLIDEYRTRY---PFKEIVPISALEGNNVETLL 165 >gi|15790199|ref|NP_280023.1| GTP-binding protein DRG [Halobacterium sp. NRC-1] gi|169235928|ref|YP_001689128.1| GTP-binding protein [Halobacterium salinarum R1] gi|141353|sp|P17103|Y1111_HALSA RecName: Full=Uncharacterized GTP-binding protein VNG_1111G gi|43450|emb|CAA33176.1| unnamed protein product [Halobacterium salinarum] gi|10580655|gb|AAG19503.1| GTP-binding protein DRG [Halobacterium sp. NRC-1] gi|167726994|emb|CAP13780.1| GTP-binding protein [Halobacterium salinarum R1] Length = 370 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 5/115 (4%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKS+ + ++T A ++ Y FTTL N G+++ L D+PG+I+ Sbjct: 62 ATVALVGFPSVGKSSLINAMTNADSEVGAYEFTTLNVNPGMLEYRGANIQLLDVPGLIEG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 A G G G L +++ ++SA E Y + +EL YN +R E Sbjct: 122 AAGGRGGGKEILSVIRGADLVIFVLSAFE---IEQYDRLAEEL--YNVNIRVDAE 171 >gi|329850675|ref|ZP_08265520.1| GTP-binding protein HflX [Asticcacaulis biprosthecum C19] gi|328840990|gb|EGF90561.1| GTP-binding protein HflX [Asticcacaulis biprosthecum C19] Length = 441 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 9/164 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + ++G NAGKST +TRA+ D F TL L +K + +L+D G I + Sbjct: 213 VALVGYTNAGKSTLFNHLTRAEVVAKDLLFATLDTTLRTLKLPNGRSAMLSDTVGFISDL 272 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H+ L+ E+ ++LH+ +A Q + L +L + + Sbjct: 273 PHELVAAFRATLEEVEQADLILHVRDVSNPETEAQRQDVEQVLQHILPDLDRGRMFEVWN 332 Query: 280 QIDTVDSDT----LARKKNELATQCGQVPFEFSSITGHGIPQIL 319 +ID +D D+ AR + ++ Q P S++TG GI +L Sbjct: 333 KIDLLDPDSKEVLYARS---VTSRDAQKPLPVSAVTGEGIEALL 373 >gi|320587817|gb|EFX00292.1| GTP-binding protein [Grosmannia clavigera kw1407] Length = 367 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 39/73 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A IG IG P+ GKST ++ +T + A Y FTTL G V + D+PGII+ Sbjct: 63 VASIGFIGFPSVGKSTLMSLLTGQHSEAAAYEFTTLTSVPGQVTYNGAPLQMIDLPGIIE 122 Query: 219 NAHQGAGIGDRFL 231 A G G G + + Sbjct: 123 GAKDGRGRGRQVI 135 >gi|218884595|ref|YP_002428977.1| small GTP-binding protein [Desulfurococcus kamchatkensis 1221n] gi|218766211|gb|ACL11610.1| small GTP-binding protein [Desulfurococcus kamchatkensis 1221n] Length = 338 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 8/154 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNA 220 + I G+P GKST ++ +TRAKP+I YPFTT +G +V +L D PGII + Sbjct: 164 VVISGVPQVGKSTLISKLTRAKPEIGSYPFTTRNIIVGHMVVGDIGRIVLIDSPGIIDTS 223 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI----EIV 276 I ++ + ++ H++ + N + Y I ++L Y +RK I + Sbjct: 224 LDEKNIIEKRAILAVK-YLADHLLFVFDVN-PSFYYSIEEQLRVYEV-VRKLIGEKPVTL 280 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSI 310 ++++D V D L + ++ G P S++ Sbjct: 281 VVNKVDLVPGDILREMVELIESRTGLKPICISAL 314 >gi|296807821|ref|XP_002844249.1| GTP-dependent nucleic acid-binding protein engD [Arthroderma otae CBS 113480] gi|238843732|gb|EEQ33394.1| GTP-dependent nucleic acid-binding protein engD [Arthroderma otae CBS 113480] Length = 452 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------KEG 204 GI+GL N GKST ++T++ A++PF T+ P V E Sbjct: 82 GIVGLANVGKSTLFQAITKSTLGNPANFPFATIDPEQARVIVPDERYDWLCKHYKPKSEV 141 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 142 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIVHVEGDVDPVRD 201 Query: 261 ELSAYNSELR-KKIEIV 276 L+ + ELR K IE V Sbjct: 202 -LNIISEELRIKDIEFV 217 >gi|196248955|ref|ZP_03147655.1| GTP-binding protein Era [Geobacillus sp. G11MC16] gi|196211831|gb|EDY06590.1| GTP-binding protein Era [Geobacillus sp. G11MC16] Length = 302 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D P TT G+ + + I D PG+ K Sbjct: 11 VAIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTDDEAQIIFIDTPGVHKPK 70 Query: 221 HQGAGIGDRFLK----HTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K ++L +V+A EE I++ L+ N+ + + Sbjct: 71 HK---LGDFMMKVALNALREVDLILFMVNA-EEGFGRGEAFIIERLNEVNTPV-----FL 121 Query: 277 GLSQIDTVDSDTL---ARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + +L VP S++ G+ + ++LE + ++ Sbjct: 122 VINKIDRVHPDELLPIIDRYKDLYPFAEIVP--ISALEGNNVERLLEQIKQRL 172 >gi|52081076|ref|YP_079867.1| GTP-binding protein Era [Bacillus licheniformis ATCC 14580] gi|52786455|ref|YP_092284.1| GTP-binding protein Era [Bacillus licheniformis ATCC 14580] gi|319644966|ref|ZP_07999199.1| GTP-binding protein era [Bacillus sp. BT1B_CT2] gi|52004287|gb|AAU24229.1| GTP-binding protein [Bacillus licheniformis ATCC 14580] gi|52348957|gb|AAU41591.1| Era [Bacillus licheniformis ATCC 14580] gi|317392775|gb|EFV73569.1| GTP-binding protein era [Bacillus sp. BT1B_CT2] Length = 301 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 21/172 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D P TT G++ + I D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTDTSQTIFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K T ++L +++A EE + I++ L + + + Sbjct: 71 HK---LGDFMMKVAHNTLKEVDLILFMINA-EEGYGKGDEFIIERLKGVKTPV-----FL 121 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ID + D L +E T+ PF+ S++ G+ I +L+ + D Sbjct: 122 IVNKIDRIHPDELLVLIDEYRTRY---PFQEIVPISALEGNNIDTLLKQIED 170 >gi|125974571|ref|YP_001038481.1| small GTP-binding protein [Clostridium thermocellum ATCC 27405] gi|125714796|gb|ABN53288.1| small GTP-binding protein [Clostridium thermocellum ATCC 27405] Length = 582 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 15/173 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST + + + D F TL P + +E +L D G I Sbjct: 358 IPTIALVGYTNAGKSTLMNRLCESNVLAEDKLFATLDPTTRSFRLSDGREALLIDTVGFI 417 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNSELRKKI 273 + H+ L+ +L+H+V A E + + IL+ L A N + Sbjct: 418 RKLPHELVEAFKSTLEEAVYADMLIHVVDASNEEAEEQVKVVNDILESLGAANKPV---- 473 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I+ L+++D V + ++ G++ FE S++TG GI +LE + + + Sbjct: 474 -IMALNKMDMVKGGL----RLAISNPNGRI-FEISAVTGQGIDAMLEGIREML 520 >gi|281419096|ref|ZP_06250113.1| GTP-binding proten HflX [Clostridium thermocellum JW20] gi|281407245|gb|EFB37506.1| GTP-binding proten HflX [Clostridium thermocellum JW20] Length = 608 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 15/173 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST + + + D F TL P + +E +L D G I Sbjct: 384 IPTIALVGYTNAGKSTLMNRLCESNVLAEDKLFATLDPTTRSFRLSDGREALLIDTVGFI 443 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNSELRKKI 273 + H+ L+ +L+H+V A E + + IL+ L A N + Sbjct: 444 RKLPHELVEAFKSTLEEAVYADMLIHVVDASNEEAEEQVKVVNDILESLGAANKPV---- 499 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I+ L+++D V + ++ G++ FE S++TG GI +LE + + + Sbjct: 500 -IMALNKMDMVKGGL----RLAISNPNGRI-FEISAVTGQGIDAMLEGIREML 546 >gi|315499852|ref|YP_004088655.1| gtp-binding proten hflx [Asticcacaulis excentricus CB 48] gi|315417864|gb|ADU14504.1| GTP-binding proten HflX [Asticcacaulis excentricus CB 48] Length = 448 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 7/170 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + ++G NAGKST +TRA+ D F TL L +K G + I++D G I + Sbjct: 221 VALVGYTNAGKSTLFNHLTRAEVLAKDMLFATLDTTLRTLKLPGGRAAIISDTVGFISDL 280 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H+ L+ ++LH+ A Q ++ L+ + +L K I + Sbjct: 281 PHELVAAFRATLEEVLEADLILHVRDMSNPESDAQAQDVMQVLTHIHPDLDKSRLIEVWN 340 Query: 280 QIDTVDSDTLARK---KNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +ID +D + AR + + P S+ITG GI ++L + K+ Sbjct: 341 KIDLLDEE--ARDILYSRAVLDRAMNKPIMVSAITGEGIEKLLSDIALKV 388 >gi|189210589|ref|XP_001941626.1| nucleolar GTP-binding protein 1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187977719|gb|EDU44345.1| nucleolar GTP-binding protein 1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 655 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 17/183 (9%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL S++RA ++ Y FTT +G F D PGI+ +A + Sbjct: 172 IAGFPNVGKSSFLKSISRADVEVQPYAFTTKSLYVGHFDYKMLRFQAVDTPGILDHALED 231 Query: 224 AGIGDRFLKHTE---RTHVLLHIVSALEENVQAAYQCILDELSAYNSE----LRKKIEIV 276 ++H H+ HI+ ++ + Q Y + +++ +N+ K I IV Sbjct: 232 MNT----IEHQSICAIAHLRAHILYFMDLSEQCGY-SVASQIALFNNIKPLFANKLISIV 286 Query: 277 GLSQIDTVDSDTL-ARKKNEL--ATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIRGE 332 +++ID + D L A + +L + G+V E S T G+ + + D++ + R Sbjct: 287 -VNKIDLMRPDQLDAETQEQLQGMLKSGEVEMLELSCNTLEGVMAVRNSVCDRLIAARNA 345 Query: 333 NEF 335 + Sbjct: 346 EKL 348 >gi|89100470|ref|ZP_01173332.1| Era [Bacillus sp. NRRL B-14911] gi|89084813|gb|EAR63952.1| Era [Bacillus sp. NRRL B-14911] Length = 309 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 14/133 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I IIG PN GKSTFL V K I +D P TT G++ +FI D PGI K Sbjct: 18 ISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTNDAQFIFIDTPGIHKPK 77 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++L +V+A EE + I+++ + + + Sbjct: 78 HK---LGDFMMKIAQNTLKEVDLILFMVNA-EEGFGRGEEFIIEKFQNVKTPI-----FL 128 Query: 277 GLSQIDTVDSDTL 289 +++ID + D L Sbjct: 129 VINKIDQIHPDKL 141 >gi|330921880|ref|XP_003299601.1| hypothetical protein PTT_10634 [Pyrenophora teres f. teres 0-1] gi|311326649|gb|EFQ92306.1| hypothetical protein PTT_10634 [Pyrenophora teres f. teres 0-1] Length = 655 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 17/179 (9%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL S++RA ++ Y FTT +G F D PGI+ +A + Sbjct: 172 IAGFPNVGKSSFLKSISRADVEVQPYAFTTKSLYVGHFDYKMLRFQAVDTPGILDHALED 231 Query: 224 AGIGDRFLKHTE---RTHVLLHIVSALEENVQAAYQCILDELSAYNSE----LRKKIEIV 276 ++H H+ HI+ ++ + Q Y + +++ +N+ K I IV Sbjct: 232 MNT----IEHQSICAIAHLRAHILYFMDLSEQCGY-SVASQIALFNNIKPLFANKLISIV 286 Query: 277 GLSQIDTVDSDTL-ARKKNEL--ATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIRG 331 +++ID + D L A + +L + G+V E S T G+ + + D++ + R Sbjct: 287 -VNKIDLMRPDQLDAETQEQLQGMLKSGEVEMLELSCNTLEGVMAVRNSVCDRLIAARN 344 >gi|198283668|ref|YP_002219989.1| GTP-binding proten HflX [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665888|ref|YP_002426299.1| GTP-binding protein HflX [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248189|gb|ACH83782.1| GTP-binding proten HflX [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518101|gb|ACK78687.1| GTP-binding protein HflX [Acidithiobacillus ferrooxidans ATCC 23270] Length = 432 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 85/173 (49%), Gaps = 20/173 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + ++G NAGKS+ ++T++ AD F TL P + ++ EG++ +LAD G +++ Sbjct: 197 VALVGYTNAGKSSLFNTLTKSSSYAADRLFATLDPAIRRLQIEGHEAILLADTVGFLRDL 256 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIV--SALEENVQ-AAYQCILDELSAYNSE---LRKKI 273 R L+ + +LLH+V SA + + Q AA +L E+ A + + K+ Sbjct: 257 PTDLIAAFRATLEEVNQAQLLLHVVDSSAPDRDAQIAAVDAVLREIGAEDIPRLLVLNKV 316 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E+ G + +S +LA S+ +G GIP++L+ + ++ Sbjct: 317 ELTGDMPGNVYES------SGKLAA------VRVSAHSGIGIPELLQAVTQRV 357 >gi|312212634|emb|CBX92717.1| similar to GTP-binding protein YchF [Leptosphaeria maculans] Length = 393 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST ++T+ A++P+ T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITKCSLGNPANFPYATIDPEEARVIVPDERFDWLVEHYKPKSVV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ I D Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPIRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L + ELR K IE V Sbjct: 144 -LDIISEELRLKDIEFV 159 >gi|317122971|ref|YP_004102974.1| GTP-binding protein Era [Thermaerobacter marianensis DSM 12885] gi|315592951|gb|ADU52247.1| GTP-binding protein Era [Thermaerobacter marianensis DSM 12885] Length = 391 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 16/172 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PN GKST L + K I +D P TT LG++ + I D PGI K Sbjct: 103 VALIGRPNVGKSTLLNQLIGRKIAIMSDKPQTTRTRILGVLNRPGAQLIFVDTPGIHKPQ 162 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H +G+ ++ RT V+ +V A + + I ++L K +I+ Sbjct: 163 HL---LGEHMVRVARRTLQEVEVVCWLVEAPDREPGPGDRYIAEQLVEV-----KTPKIL 214 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKI 326 +++ID V + A Q GQ S++ G G+P+++E L ++ Sbjct: 215 VVNKIDQVAPGEVPAIAQRFA-QLGQFAAVHPVSALHGVGVPELVEELEGRL 265 >gi|256004068|ref|ZP_05429053.1| GTP-binding proten HflX [Clostridium thermocellum DSM 2360] gi|255991991|gb|EEU02088.1| GTP-binding proten HflX [Clostridium thermocellum DSM 2360] Length = 582 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 15/173 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST + + + D F TL P + +E +L D G I Sbjct: 358 IPTIALVGYTNAGKSTLMNRLCESNVLAEDKLFATLDPTTRSFRLSDGREALLIDTVGFI 417 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNSELRKKI 273 + H+ L+ +L+H+V A E + + IL+ L A N + Sbjct: 418 RKLPHELVEAFKSTLEEAVYADMLIHVVDASNEEAEEQVKVVNDILESLGAANKPV---- 473 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I+ L+++D V + ++ G++ FE S++TG GI +LE + + + Sbjct: 474 -IMALNKMDMVKGGL----RLAISNPNGRI-FEISAVTGQGIDAMLEGIREML 520 >gi|117620764|ref|YP_856299.1| GTP-binding protein EngA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166224301|sp|A0KJ48|DER_AERHH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|117562171|gb|ABK39119.1| GTP-binding protein EngA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 499 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 13/163 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G K G EFI+ D G I Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGELEFIVVDTGG-IDGT 63 Query: 221 HQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A + AA Q I + L + KK+ +V Sbjct: 64 EEGIELKMAEQSLLAIEEADVVLFMVDA-RAGLTAADQAIAEHLRKTH----KKVFLVA- 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 ++ D +D D+ + LA G+V ++ ++ G G+ +LE Sbjct: 118 NKTDGIDGDSAVSEFYGLA--LGEV-YQMAAAHGRGVLSLLEL 157 >gi|260913831|ref|ZP_05920305.1| GTP-binding protein HflX [Pasteurella dagmatis ATCC 43325] gi|260631918|gb|EEX50095.1| GTP-binding protein HflX [Pasteurella dagmatis ATCC 43325] Length = 449 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 7/112 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST ++T+A AD F TL P L ++ + ILAD G I Sbjct: 221 IPTISLVGYTNAGKSTLFNAITQANVYAADQLFATLDPTLRRLQLQDVGTTILADTVGFI 280 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSA 264 ++ H L+ T +LLH++ E EN+ AA +L E+ A Sbjct: 281 RHLPHDLVSAFKSTLQETTEASLLLHVIDCAEPRKLENI-AAVDEVLVEIKA 331 >gi|163868472|ref|YP_001609681.1| GTP-binding protein HflX [Bartonella tribocorum CIP 105476] gi|161018128|emb|CAK01686.1| GTP-binding protein HflX [Bartonella tribocorum CIP 105476] Length = 445 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 4/169 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + ++G NAGKST ++ A + F TL P L +V K +L+D G I N Sbjct: 220 VALVGYTNAGKSTLFNRLSGADVLAKNMLFATLDPTLRKVVLPHGKTILLSDTVGFISNL 279 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 R L+ ++LH+ L+ + + Q +L+ LS+ + ++ I+ + Sbjct: 280 PTNLIAAFRATLEEVVEADLILHVRDMLDLDHRTHAQDVLEVLSSLDIDIDDTEHIIEVW 339 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 ++ID VD L + T+ S++ G G+ Q+L+ + +IF Sbjct: 340 NKIDMVDEQALNVLQTSAKTRLNPALI-VSALKGDGLDQLLKTIEKRIF 387 >gi|15679616|ref|NP_276733.1| GTP1/OBG family GTP-binding protein [Methanothermobacter thermautotrophicus str. Delta H] gi|2622747|gb|AAB86094.1| GTP-binding protein, GTP1/OBG family [Methanothermobacter thermautotrophicus str. Delta H] Length = 380 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 36/59 (61%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG P+ GKST L +T A+ K+ DY FTTL G+++ + + DIPGII A Sbjct: 80 VVLIGFPSVGKSTLLNELTSAESKVGDYQFTTLEIVPGVMEYRGAQIQIFDIPGIITGA 138 >gi|261493047|ref|ZP_05989587.1| GTP-binding protein HflX [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496335|ref|ZP_05992730.1| GTP-binding protein HflX [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307979|gb|EEY09287.1| GTP-binding protein HflX [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311267|gb|EEY12430.1| GTP-binding protein HflX [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 461 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 7/114 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T+A AD F TL P L ++ + ILAD G I Sbjct: 227 IPTVSLVGYTNAGKSTLFNAITQAGVYAADQLFATLDPTLRRIQVQDVGTTILADTVGFI 286 Query: 218 K-NAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYN 266 + H L+ T +LLH++ + EN+ A Q +LDE+ A + Sbjct: 287 RFLPHDLVSAFKSTLQETTEATLLLHVIDGSDERKNENIDAVNQ-VLDEIGALD 339 >gi|316941690|gb|ADU75724.1| GTP-binding proten HflX [Clostridium thermocellum DSM 1313] Length = 608 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 15/173 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST + + + D F TL P + +E +L D G I Sbjct: 384 IPTIALVGYTNAGKSTLMNRLCESNVLAEDKLFATLDPTTRSFRLSDGREALLIDTVGFI 443 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNSELRKKI 273 + H+ L+ +L+H+V A E + + IL+ L A N + Sbjct: 444 RKLPHELVEAFKSTLEEAVYADMLIHVVDASNEEAEEQVKVVNDILESLGAANKPV---- 499 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I+ L+++D V + ++ G++ FE S++TG GI +LE + + + Sbjct: 500 -IMALNKMDMVKGGL----RLAISNPNGRI-FEISAVTGQGIDAMLEGIREML 546 >gi|126466463|ref|YP_001041572.1| small GTP-binding protein [Staphylothermus marinus F1] gi|126015286|gb|ABN70664.1| small GTP-binding protein [Staphylothermus marinus F1] Length = 696 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 17/169 (10%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 ++G+IG PN GKST +T K +A++P T+ ++G + I D+PGI Sbjct: 7 EVGVIGQPNVGKSTLFNVLTGRKVHVANWPGVTVEKHVGERIHRGRRIIFVDLPGI--YG 64 Query: 221 HQGAGIGDRFLKH---TERTHVLLHIVSAL--EENVQAAYQCILDELSAYNSELRKKIEI 275 I +R + T++ VLL +V +L E + A Q + E+ ++ + Sbjct: 65 FSATTIEERIARKYILTQQPDVLLVLVDSLNPERTMYLAIQAL---------EITPRVIL 115 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 V +++D+V + + L+ + SS TG GI ++L+ + D Sbjct: 116 V-FTKVDSVHAHGIHINYRALSNKLDVPVVPVSSATGVGIVELLDTIID 163 >gi|255942589|ref|XP_002562063.1| Pc18g02190 [Penicillium chrysogenum Wisconsin 54-1255] gi|211586796|emb|CAP94443.1| Pc18g02190 [Penicillium chrysogenum Wisconsin 54-1255] Length = 378 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 2/114 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST + +T + A Y FTTL G V + + D+PGII+ Sbjct: 63 VASVGFIGFPSVGKSTLMNKLTGQHSEAAAYEFTTLTTVPGQVMYNGAKIQILDLPGIIE 122 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G G + + + +++ ++ + V + I +EL + + KK Sbjct: 123 GAKDGKGRGRQVIAVAKTCNLIFIVLDVNKPLVDK--RVIENELEGFGIRINKK 174 >gi|320449861|ref|YP_004201957.1| GTP-binding protein HflX [Thermus scotoductus SA-01] gi|320150030|gb|ADW21408.1| GTP-binding protein HflX [Thermus scotoductus SA-01] Length = 552 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 17/173 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK----EFILADIPGII 217 I ++G NAGK+T L ++ R D F TL P + + G+ E + D G I Sbjct: 378 IAVVGYTNAGKTTLLQALARGGEPGEDKLFATLRP---LTRRGFLPGVGEVLFTDTVGFI 434 Query: 218 KNAHQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + R L+ +L+H++ A EE Y+ + + L+ E + ++ Sbjct: 435 RQMPKELLTAFRATLEEVREADLLIHVLDASEEGAMGRYRVVEELLAELGVEAPR---VL 491 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 LS++D L + +L G VP S++ G G+ ++ E L + + + Sbjct: 492 ALSKVDRAAPYDLFYLREKL----GGVP--VSALKGTGVSELREALAEALLKV 538 >gi|302306584|ref|NP_982986.2| ABR040Wp [Ashbya gossypii ATCC 10895] gi|299788586|gb|AAS50810.2| ABR040Wp [Ashbya gossypii ATCC 10895] Length = 412 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 18/87 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPN-----------------LGIVKEG 204 GI+GL N GKSTF ++T++ A+YPF T+ P G K+ Sbjct: 24 GIVGLANVGKSTFFQAITKSTLGNPANYPFATIDPEEAKVLVPSEHLDHLQKLYGSRKKI 83 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFL 231 + DI G+ +NA +G G+G++FL Sbjct: 84 PATLTVYDIAGLTRNASRGEGLGNKFL 110 >gi|302665270|ref|XP_003024247.1| hypothetical protein TRV_01598 [Trichophyton verrucosum HKI 0517] gi|291188294|gb|EFE43636.1| hypothetical protein TRV_01598 [Trichophyton verrucosum HKI 0517] Length = 468 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------KEG 204 GI+GL N GKST ++T++ A++P+ T+ P V E Sbjct: 81 GIVGLANVGKSTLFQAITKSTLGNPANFPYATIDPEQARVIVPDERYDWLCKHYKPKSEV 140 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ K A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 141 PANLTVYDIAGLTKGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIVHVEGDVDPVRD 200 Query: 261 ELSAYNSELR-KKIEIV 276 L+ + ELR K IE V Sbjct: 201 -LNIISEELRIKDIEFV 216 >gi|152965471|ref|YP_001361255.1| small GTP-binding protein [Kineococcus radiotolerans SRS30216] gi|151359988|gb|ABS02991.1| small GTP-binding protein [Kineococcus radiotolerans SRS30216] Length = 530 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 25/182 (13%) Query: 149 EKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYK 206 EK + + + I G NAGKS+ L +T A + + F TL P + EG + Sbjct: 297 EKRSLRHARAVPAVSIAGYTNAGKSSLLNRLTGAGVLVENALFATLDPTVRRAQTPEG-R 355 Query: 207 EFILADIPGIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDEL 262 + LAD G +++ HQ L+ + V+LH+V + + AA + +L ++ Sbjct: 356 PYTLADTVGFVRSLPHQLVEAFRSTLEEVAESDVVLHVVDGSHPDPEGQLAAVRGVLADV 415 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT----LARKKNELATQCGQVPFEFSSITGHGIPQI 318 A + E+V +++ D D + L R+KN +A S+ TG GI ++ Sbjct: 416 DAQDVP-----ELVAINKADVADPEVVDRLLRREKNAVA---------VSARTGEGIEEL 461 Query: 319 LE 320 LE Sbjct: 462 LE 463 >gi|300707656|ref|XP_002996027.1| hypothetical protein NCER_100942 [Nosema ceranae BRL01] gi|239605286|gb|EEQ82356.1| hypothetical protein NCER_100942 [Nosema ceranae BRL01] Length = 362 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 3/113 (2%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A I +IG P+ GKST L+ +T + K A++ FTTL G + + D+PGII Sbjct: 62 ARIALIGFPSVGKSTLLSKITSTESKAAEHEFTTLDCIAGKMVYNGSTIQILDLPGIISG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 A G G + + + ++L ++ +N ++ ++ EL L KK Sbjct: 122 ASLNLGRGRQVISISRTADLILVVLDPRRKNDKSV---LIRELYNMGIRLNKK 171 >gi|170289628|ref|YP_001736444.1| GTPase [Candidatus Korarchaeum cryptofilum OPF8] gi|170173708|gb|ACB06761.1| Predicted GTPase [Candidatus Korarchaeum cryptofilum OPF8] Length = 344 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 2/94 (2%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG N+G+ST LA++T AKP I+ PFTT+ P G+++ + + + P +I Sbjct: 38 AQLVLIGFTNSGRSTLLATLTNAKPSISPNPFTTMRPVEGMMEIYGTQIQVVEAPPLILE 97 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA 253 A G + + + + VL VS+LE+ + + Sbjct: 98 AQGGP--TNLAVALAKNSDVLGITVSSLEDPLDS 129 >gi|330444282|ref|YP_004377268.1| GTP binding protein [Chlamydophila pecorum E58] gi|328807392|gb|AEB41565.1| GTP binding protein [Chlamydophila pecorum E58] Length = 421 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 16/170 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-VKEGYKEFILADIPGII 217 I +IG N+GKS+ L +T A D F TL P V G + ++ D G I Sbjct: 192 IPTFALIGYTNSGKSSLLNVLTAADTYTEDKLFATLDPKTRTSVLPGGRRVLVTDTVGFI 251 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 + H L+ VLLH+V A EE++Q + +L EL + ++ Sbjct: 252 RKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPLAEEHIQTTF-ALLKELHIEHPKM--- 307 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 I L+++D + ++ K L+ + V S+ TG GIP +LE + Sbjct: 308 --ITVLNKVDALPDRCVSGKLRLLSPRTVLV----SAKTGEGIPHLLEAM 351 >gi|289522194|ref|ZP_06439048.1| GTP-binding protein YchF [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504030|gb|EFD25194.1| GTP-binding protein YchF [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 364 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 22/116 (18%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK----------EGYK-- 206 + + GI+GLP +GK+T +T A+ ++ Y PN +V YK Sbjct: 1 MLNCGIVGLPLSGKTTIFNVLTSARAEVKSYAGGKTDPNRAVVDVPDGRLQELASVYKPK 60 Query: 207 -------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY 255 EF+ D+ G+ K+A +GAG+G+ FL + L+HI+ +N + A+ Sbjct: 61 KTVPAQIEFV--DLAGLSKDASKGAGLGNAFLTFVADSDALIHIIRCF-DNAEVAH 113 >gi|223041593|ref|ZP_03611792.1| GTP-binding protein hflX [Actinobacillus minor 202] gi|223017568|gb|EEF15980.1| GTP-binding protein hflX [Actinobacillus minor 202] Length = 456 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 17/175 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T+A AD F TL P L ++ + ILAD G I Sbjct: 219 IPTVSLVGYTNAGKSTLFNAITQAGVYAADQLFATLDPTLRKMQIQDVGTTILADTVGFI 278 Query: 218 K-NAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 + H L+ T +LLH++ + EN+ A Q +LDE+ A + Sbjct: 279 RFLPHDLVSAFKATLQETIEASLLLHVIDVSDDRKNENITAVNQ-VLDEIGALDIP---- 333 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILECLHDKI 326 I+ +++D ++ T +++E G+V + S+ TG GI + E + +++ Sbjct: 334 -SILVFNKVDRLEGITPFIERDE----EGRVTAVYLSAHTGEGIELLYEAIRERL 383 >gi|59711240|ref|YP_204016.1| GTP-binding protein EngA [Vibrio fischeri ES114] gi|197336109|ref|YP_002155390.1| ribosome-associated GTPase EngA [Vibrio fischeri MJ11] gi|81311005|sp|Q5E768|DER_VIBF1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238690264|sp|B5FAX6|DER_VIBFM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|59479341|gb|AAW85128.1| predicted GTP-binding protein [Vibrio fischeri ES114] gi|197317599|gb|ACH67046.1| ribosome-associated GTPase EngA [Vibrio fischeri MJ11] Length = 500 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 13/167 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G K +EFIL D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAKLEEQEFILIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I QG + ++ L E V+L +V A DE A + R+K Sbjct: 60 IDGTEQGVETKMAEQSLAAIEEADVVLFMVDG------RAGLTSADEAIAKHLRSREKPT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 + +++ID +D+D + + +L ++ ++ G G+ +LE Sbjct: 114 FLVVNKIDGIDADAASAEFWQLGMNK---VYQIAASHGRGVTSLLEL 157 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 21/179 (11%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTT---LYPNLGIVKEGYKEFILADIPGII 217 + IIG PN GKST + + + D P TT +Y + + +EG +E++L D G+ Sbjct: 213 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIY--IPMEREG-QEYVLIDTAGVR 269 Query: 218 KNAHQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 + + + LK E +V+L ++ A E + L+A S Sbjct: 270 RRGRINETVEKFSVIKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRS------ 323 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHDKIFS 328 ++ +++ D +D+D + K+EL + G V F S++ G G+ + E + + S Sbjct: 324 LVIAVNKWDGLDNDVKEKVKSELDRRLGFVDFARIHFISALHGTGVGHLYESVQEAYVS 382 >gi|16079583|ref|NP_390407.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str. 168] gi|221310453|ref|ZP_03592300.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str. 168] gi|221314776|ref|ZP_03596581.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319699|ref|ZP_03600993.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str. JH642] gi|221323976|ref|ZP_03605270.1| GTP-binding protein Era [Bacillus subtilis subsp. subtilis str. SMY] gi|321312012|ref|YP_004204299.1| GTPase Era [Bacillus subtilis BSn5] gi|1168646|sp|P42182|ERA_BACSU RecName: Full=GTPase Era; AltName: Full=Bex protein gi|606745|gb|AAB59994.1| Bex [Bacillus subtilis] gi|1303826|dbj|BAA12482.1| YqfH [Bacillus subtilis] gi|2634961|emb|CAB14458.1| GTP-binding protein [Bacillus subtilis subsp. subtilis str. 168] gi|291484975|dbj|BAI86050.1| GTP-binding protein Era [Bacillus subtilis subsp. natto BEST195] gi|320018286|gb|ADV93272.1| GTPase Era [Bacillus subtilis BSn5] Length = 301 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 21/167 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D P TT G++ G + I D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++L +++A EE + I+++L ++ + + Sbjct: 71 HK---LGDFMMKVAQNTLKEVDLILFMINA-EEGYGKGDEFIIEKLQTMSTPV-----FL 121 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQIL 319 +++ID + D L +E + PF+ S++ G+ I +L Sbjct: 122 IVNKIDKIHPDQLLLLIDEYRKRY---PFKEIVPISALEGNNIETLL 165 >gi|156097991|ref|XP_001615028.1| GTP-binding protein [Plasmodium vivax SaI-1] gi|148803902|gb|EDL45301.1| GTP-binding protein, putative [Plasmodium vivax] Length = 636 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI----LADIPGII 217 I IIG N GKS+ L SVT AK K+ADY FTT NLG + + + D+PG+I Sbjct: 455 ISIIGCTNVGKSSVLNSVTNAKSKVADYNFTTKEFNLGHYSFTSQNDVFTTQIMDLPGLI 514 Query: 218 KNAHQGAGIGDRF 230 + + ++ Sbjct: 515 NRPEEKRNLMEKL 527 >gi|326475394|gb|EGD99403.1| GTP-binding protein YchF [Trichophyton tonsurans CBS 112818] gi|326482390|gb|EGE06400.1| GTP-dependent nucleic acid-binding protein engD [Trichophyton equinum CBS 127.97] Length = 398 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------KEG 204 GI+GL N GKST ++T++ A++P+ T+ P V E Sbjct: 24 GIVGLANVGKSTLFQAITKSTLGNPANFPYATIDPEQARVIVPDERYDWLCKHYKPKSEV 83 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ K A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 84 PANLTVYDIAGLTKGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIVHVEGDVDPVRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L+ + ELR K IE V Sbjct: 144 -LNIISEELRIKDIEFV 159 >gi|302502680|ref|XP_003013301.1| hypothetical protein ARB_00486 [Arthroderma benhamiae CBS 112371] gi|291176864|gb|EFE32661.1| hypothetical protein ARB_00486 [Arthroderma benhamiae CBS 112371] Length = 468 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------KEG 204 GI+GL N GKST ++T++ A++P+ T+ P V E Sbjct: 81 GIVGLANVGKSTLFQAITKSTLGNPANFPYATIDPEQARVIVPDERYDWLCKHYKPKSEV 140 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ K A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 141 PANLTVYDIAGLTKGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIVHVEGDVDPVRD 200 Query: 261 ELSAYNSELR-KKIEIV 276 L+ + ELR K IE V Sbjct: 201 -LNIISEELRIKDIEFV 216 >gi|195380185|ref|XP_002048851.1| GJ21086 [Drosophila virilis] gi|194143648|gb|EDW60044.1| GJ21086 [Drosophila virilis] Length = 652 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 15/184 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ + Sbjct: 171 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + +R + + L H+ + + + + QC + +++ + S K I Sbjct: 230 ----LEERNVIEMQAITALAHLRACVLYFMDISEQCGHSLEEQVQLFESIKPLFTNKPLI 285 Query: 276 VGLSQIDTVDSDTLARKKNELATQC---GQVPFEF-SSITGHGIPQILECLHDKIFSIRG 331 + +++ID + + L ++ + T+ QVP F S++ G+ ++ +++ S R Sbjct: 286 LAINKIDILSVEDLPAERQAIITKLQEDKQVPVMFMSTVQETGVMEVKTEACERLLSYRV 345 Query: 332 ENEF 335 + + Sbjct: 346 DQKM 349 >gi|221053646|ref|XP_002258197.1| GTP binding protein [Plasmodium knowlesi strain H] gi|193808030|emb|CAQ38734.1| GTP binding protein, putative [Plasmodium knowlesi strain H] Length = 623 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI----LADIPGII 217 I IIG N GKS+ L SVT AK K+ADY FTT NLG + + + D+PG+I Sbjct: 442 ISIIGCTNVGKSSILNSVTNAKSKVADYNFTTKEFNLGHYSFTNENDVFTTQIMDLPGLI 501 Query: 218 KNAHQGAGIGDRF 230 + + ++ Sbjct: 502 NRPEEKRNLMEKL 514 >gi|164655634|ref|XP_001728946.1| hypothetical protein MGL_3940 [Malassezia globosa CBS 7966] gi|159102834|gb|EDP41732.1| hypothetical protein MGL_3940 [Malassezia globosa CBS 7966] Length = 433 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGYKEFI----------- 209 +GI+GLPN GKST ++ + K A++P+ T+ P V + F+ Sbjct: 61 MGIVGLPNVGKSTLFNTIAKCDLGKAANFPYATIEPEEARVPVPDERFLWLCDLYKPKSE 120 Query: 210 ------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+ A GAG+G+ FL + + ++ A ++ Sbjct: 121 VPAFLTVIDIAGLTAGASTGAGLGNAFLSNVRAVDGIFQVIRAFDD 166 >gi|156551926|ref|XP_001607452.1| PREDICTED: similar to BcDNA.LD23830 [Nasonia vitripennis] Length = 640 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 15/179 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ + Sbjct: 171 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC--ILDE-LSAYNS---ELRKKIEI 275 + +R + L H+ +A+ + QC LDE + Y S + K + Sbjct: 230 ----LEERNTIEMQAVTALAHLRAAVLYFFDISEQCGHSLDEQMKLYESIKPLFQNKPLL 285 Query: 276 VGLSQIDTVDSDTLARKKNELATQC---GQVPF-EFSSITGHGIPQILECLHDKIFSIR 330 + ++++D + + L +K + + ++P E S++T G+ + +K+ R Sbjct: 286 IVVNKVDVLRLEELPEEKRSILKELENDEKIPLIEMSTVTDFGVMDVKTQACEKLLEFR 344 >gi|126652809|ref|ZP_01724954.1| Era [Bacillus sp. B14905] gi|126590345|gb|EAZ84465.1| Era [Bacillus sp. B14905] Length = 271 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 14/133 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I IIG PN GKSTFL V K I +D P TT G++ + I D PGI K Sbjct: 13 ISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTSTDSQMIFIDTPGIHKPK 72 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD LK + T V+L +V+A E+ + + IL+ L+ ++ + + Sbjct: 73 HK---LGDFMLKVAKNTLREVDVILFMVNA-EQKLGKGDEFILEMLAGNSTPV-----FL 123 Query: 277 GLSQIDTVDSDTL 289 +++ID + D L Sbjct: 124 VINKIDQIHPDEL 136 >gi|241802324|ref|XP_002414531.1| GTP-binding protein DRG2, putative [Ixodes scapularis] gi|215508742|gb|EEC18196.1| GTP-binding protein DRG2, putative [Ixodes scapularis] Length = 364 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 36/64 (56%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L +T + A Y FTTL G+++ L D+PGII+ Sbjct: 63 ARVALIGFPSVGKSTLLNILTDTHSESAAYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122 Query: 220 AHQG 223 A QG Sbjct: 123 ASQG 126 >gi|15791331|ref|NP_281155.1| GTP-binding protein [Halobacterium sp. NRC-1] gi|169237090|ref|YP_001690290.1| GTP-binding protein [Halobacterium salinarum R1] gi|10581976|gb|AAG20635.1| GTP-binding protein homolog [Halobacterium sp. NRC-1] gi|167728156|emb|CAP14944.1| putative GTP-binding protein [Halobacterium salinarum R1] Length = 327 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 36/59 (61%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + + + G PN GKS+F+ +VT A + A+YPFTT ++G + + + L D PG++ Sbjct: 163 VPTVVVAGYPNVGKSSFVNAVTNASIETAEYPFTTKSVDIGHFERDHITWQLVDTPGLL 221 >gi|312880567|ref|ZP_07740367.1| GTP-binding protein YchF [Aminomonas paucivorans DSM 12260] gi|310783858|gb|EFQ24256.1| GTP-binding protein YchF [Aminomonas paucivorans DSM 12260] Length = 364 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 17/99 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEGY 205 GI+GLP +GK+T +TRA ++ Y PN +V KE Sbjct: 5 GIVGLPLSGKTTVFNVITRAGAEVKPYAGGKTDPNRAVVSVPDPRFDELVRVHQPKKETP 64 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + D+ G+ ++A +GAG+G+ FL L+H++ Sbjct: 65 AQVEFVDLAGLSRDASKGAGLGNGFLSFAAEADALIHVL 103 >gi|255571117|ref|XP_002526509.1| nucleolar GTP-binding protein, putative [Ricinus communis] gi|223534184|gb|EEF35900.1| nucleolar GTP-binding protein, putative [Ricinus communis] Length = 443 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 5/86 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G PN GKS+ + ++ KP++ +YPFTT +G + ++ F + D PG++K Sbjct: 251 LCLVGAPNVGKSSLVRILSTGKPEVCNYPFTTRGILMGHIAFDFQHFQVTDTPGLLKRCD 310 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSAL 247 + DR VL H+ +A+ Sbjct: 311 E-----DRNNLEKLTLAVLTHLPTAI 331 >gi|188582188|ref|YP_001925633.1| GTP-binding proten HflX [Methylobacterium populi BJ001] gi|179345686|gb|ACB81098.1| GTP-binding proten HflX [Methylobacterium populi BJ001] Length = 471 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 10/177 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNA 220 + ++G NAGKST ++T+A+ + D F TL P K + E IL+D G I + Sbjct: 231 VALVGYTNAGKSTLFNALTKAEVRAQDMLFATLDPTARATKLPHGETVILSDTVGFISDL 290 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIV 276 R L+ +LLH+ + QA + +L EL + + IE+ Sbjct: 291 PTSLIAAFRATLEDVIEADILLHVRDVSHGDTQAQAEDVEGVLRELG-IEPDAERIIEV- 348 Query: 277 GLSQIDTVDSDTLARKKNELATQ--CGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 ++ D +D R N A G P S++TG G+P + E + ++ R Sbjct: 349 -WNKADLLDDGERTRLLNLSAAHRGAGPAPILVSALTGEGLPALAERIEGQVARARS 404 >gi|170099105|ref|XP_001880771.1| predicted protein [Laccaria bicolor S238N-H82] gi|164644296|gb|EDR08546.1| predicted protein [Laccaria bicolor S238N-H82] Length = 393 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK----------EGYKE--- 207 IGI+GLPN GKS+F ++ A++P+ T+ P + + YK Sbjct: 24 IGIVGLPNVGKSSFFNVLSETDLANAANFPYATINPEEARIPVPDTRFEWLCDTYKPASR 83 Query: 208 ----FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+ A GAG+G+ FL H + +V A ++ Sbjct: 84 VPAFLTCIDIAGLTAGASTGAGLGNSFLSHVRAVDGIFQVVRAFDD 129 >gi|123464697|ref|XP_001317118.1| GTP-binding protein YchF containing protein [Trichomonas vaginalis G3] gi|121899844|gb|EAY04895.1| GTP-binding protein YchF containing protein [Trichomonas vaginalis G3] Length = 392 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 23/141 (16%) Query: 154 LKLKLIADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVK---EGYKEFI 209 +K +GI+G+PN GKS ++ R +YPF T+ PN+ V+ E + E Sbjct: 13 VKFSKTLTMGIVGMPNVGKSLLFNLLSKRDLAATQNYPFCTIQPNIARVEVPDERFTELC 72 Query: 210 --------------LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NV 251 + DI G+++ A +G G+G+ FL + + + +V ++ +V Sbjct: 73 KLFHPKNEVPATLSITDIAGLVRGACKGEGLGNEFLSNIRAVNGIYQVVRIFDDPDVTHV 132 Query: 252 QAAYQCILDELSAYNSELRKK 272 + I D L ELR+K Sbjct: 133 EGNVDPIRD-LEIIGEELRQK 152 >gi|33519558|ref|NP_878390.1| HflX protein, putative GTP-binding protein [Candidatus Blochmannia floridanus] gi|33517221|emb|CAD83603.1| HflX protein,putative GTPase [Candidatus Blochmannia floridanus] Length = 372 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 5/113 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGII 217 ++ I ++G NAGKST +T + +A+ F TL P + G K IL D G I Sbjct: 200 MSTISLVGYTNAGKSTLFNVMTSSCVDVAEKLFVTLDPTFRRIIHGKKSNIILIDTVGFI 259 Query: 218 KNAHQGAGIGDR-FLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYN 266 +N + + L+ T ++ +L+H+V A + V+ IL+E++ YN Sbjct: 260 QNLPKDLITAFKSTLQETMQSKLLIHVVDASSKKVKQNIDIVNVILNEVNIYN 312 >gi|171185382|ref|YP_001794301.1| small GTP-binding protein [Thermoproteus neutrophilus V24Sta] gi|170934594|gb|ACB39855.1| small GTP-binding protein [Thermoproteus neutrophilus V24Sta] Length = 351 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 36/56 (64%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I + G PN GKS+F+ V+ A+P++ADYPFTT ++G ++ + D PG++ Sbjct: 177 IVVAGAPNVGKSSFVRCVSSARPEVADYPFTTKQIHVGHIRIRGDVVQVVDTPGLL 232 >gi|242767690|ref|XP_002341418.1| GTP-binding protein YchF [Talaromyces stipitatus ATCC 10500] gi|218724614|gb|EED24031.1| GTP-binding protein YchF [Talaromyces stipitatus ATCC 10500] Length = 394 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST ++T+ A++P+ T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITKCSLGNPANFPYATIDPEEARVIVPDARYDWLCEHYKPKSRV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVNPVRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L+ + ELR K IE V Sbjct: 144 -LNIISEELRLKDIEFV 159 >gi|195154595|ref|XP_002018207.1| GL16889 [Drosophila persimilis] gi|194114003|gb|EDW36046.1| GL16889 [Drosophila persimilis] Length = 653 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 87/184 (47%), Gaps = 15/184 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ + Sbjct: 171 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC--ILDELSAYNSELR----KKIEI 275 + +R + + L H+ + + + + QC L+E A ++ K I Sbjct: 230 ----LEERNVIEMQAITALAHLRACVLYFMDISEQCGHSLEEQVALFESIKPLFTNKPLI 285 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQ---VP-FEFSSITGHGIPQILECLHDKIFSIRG 331 + ++++D + + L +++ E+ T+ + VP S++ G+ ++ +++ S R Sbjct: 286 LAINKVDILMPEDLPKERQEIITKLQEDKNVPVILMSTVQETGVMEVKTEACERLLSYRV 345 Query: 332 ENEF 335 + + Sbjct: 346 DQKM 349 >gi|312622894|ref|YP_004024507.1| GTP-binding proten hflx [Caldicellulosiruptor kronotskyensis 2002] gi|312203361|gb|ADQ46688.1| GTP-binding proten HflX [Caldicellulosiruptor kronotskyensis 2002] Length = 508 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 26/174 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA- 220 + IIG NAGKST + +++A I D F TL V KEF+L D G I+N Sbjct: 352 VSIIGYTNAGKSTLMNRISKADVLIEDKLFATLDTTTRRVYHKGKEFLLTDTVGFIRNLP 411 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYN---SELRKKI 273 H L+ + ++++L++V + ++++ + + +L +L A N + KI Sbjct: 412 HHLVEAFSSTLEEVKYSNLILNVVDISDPYYYDHIKVS-EDLLKQLGAENIPVIRVYNKI 470 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILECLHDKI 326 + V LS ID D+ +P F S+ G GI +L+ + ++I Sbjct: 471 DKVDLSSIDVFDN----------------LPHVFISAQDGRGISTLLDMIVERI 508 >gi|289207682|ref|YP_003459748.1| GTP-binding proten HflX [Thioalkalivibrio sp. K90mix] gi|288943313|gb|ADC71012.1| GTP-binding proten HflX [Thioalkalivibrio sp. K90mix] Length = 441 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 13/169 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKST +T + AD F TL P L + ++ ILAD G + Sbjct: 199 IPTVSLVGYTNAGKSTLFNRLTHSDVYEADQLFATLDPTLRRLDLAPHQSLILADTVGFV 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKI 273 ++ H+ L T +LLH++ A + +A + +L+E+ A + + Sbjct: 259 RDLPHELVAAFKATLTETREAALLLHVIDAADPEREARIRQVEAVLEEIGAQDVPCWRVY 318 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 ++ID ++S A E G F S+ TG GI + E L Sbjct: 319 -----NKIDRLESTPDA---AEARFGSGDDVFWVSAYTGEGIATLEEHL 359 >gi|171685738|ref|XP_001907810.1| hypothetical protein [Podospora anserina S mat+] gi|170942830|emb|CAP68483.1| unnamed protein product [Podospora anserina S mat+] Length = 353 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 1/86 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A IG IG P+ GKST ++ +T + A Y FTTL G V + D+PGII+ Sbjct: 49 VASIGFIGFPSVGKSTLMSHLTGQHSEAAAYEFTTLTSVPGQVVYNGAPLQMIDLPGIIE 108 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G + + +T L+ IV Sbjct: 109 GAKDGRGRGRQVIA-VAKTCNLIFIV 133 >gi|168699638|ref|ZP_02731915.1| TGS domain protein [Gemmata obscuriglobus UQM 2246] Length = 331 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 32/57 (56%) Query: 166 GLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 G PN GKS + +T+A P +A YPFTT P LG++ L D+P I + ++ Sbjct: 89 GPPNCGKSLLMTKLTKATPAVAPYPFTTREPILGMMDYEDARVQLVDLPPITADHYE 145 >gi|218530504|ref|YP_002421320.1| GTP-binding protein Era [Methylobacterium chloromethanicum CM4] gi|240138863|ref|YP_002963338.1| GTP-binding protein [Methylobacterium extorquens AM1] gi|218522807|gb|ACK83392.1| GTP-binding protein Era [Methylobacterium chloromethanicum CM4] gi|240008835|gb|ACS40061.1| GTP-binding protein [Methylobacterium extorquens AM1] Length = 326 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 37/182 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI---- 216 + +IG+PNAGKST L ++ AK I TT GIV EG + +L D PGI Sbjct: 36 VALIGVPNAGKSTLLNALVGAKVSIVSRKVQTTRALVRGIVMEGNAQIVLVDTPGIFAPK 95 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 + +A GA D +L+ ++E V + IL L Sbjct: 96 RRLDRAMVHSAWSGAADADAIC-------LLIDARKGVDEEV----ETILRRLPEV---- 140 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQC-GQVPFE----FSSITGHGIPQILECLHD 324 K+ +I+ L++ID + + L EL + VPFE S++ G GI + + L Sbjct: 141 -KRPKILILNKIDLIARERLL----ELVAKLNAMVPFEDTFLISALKGDGIADLRKALAA 195 Query: 325 KI 326 ++ Sbjct: 196 RM 197 >gi|322370026|ref|ZP_08044588.1| GTP-binding protein [Haladaptatus paucihalophilus DX253] gi|320550362|gb|EFW92014.1| GTP-binding protein [Haladaptatus paucihalophilus DX253] Length = 319 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 1/66 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII-KNA 220 + + G PN GKS+F+ ++T A+ +IA+YPFTT ++G + + + + D PG++ + A Sbjct: 158 VVVAGYPNVGKSSFVNTITNARNEIAEYPFTTKGIHVGHFERDHIRYQIVDTPGLLDRPA 217 Query: 221 HQGAGI 226 + GI Sbjct: 218 DERNGI 223 >gi|303244459|ref|ZP_07330794.1| small GTP-binding protein [Methanothermococcus okinawensis IH1] gi|302485157|gb|EFL48086.1| small GTP-binding protein [Methanothermococcus okinawensis IH1] Length = 339 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 15/92 (16%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 +K I + I G PN GKST L +T A+P++ YPFTT N+G G + D PG Sbjct: 170 VKDIPTVVIAGYPNVGKSTLLKKLTNAEPEVNAYPFTTKGLNVGYSDYGIQ---FVDTPG 226 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 ++ DR + ER + LH V AL Sbjct: 227 VL----------DRPI--YERNDIELHAVVAL 246 >gi|332531846|ref|ZP_08407731.1| GTP-binding protein HflX [Pseudoalteromonas haloplanktis ANT/505] gi|332038822|gb|EGI75264.1| GTP-binding protein HflX [Pseudoalteromonas haloplanktis ANT/505] Length = 429 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 7/112 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKST +T + AD F TL P L ++ G ILAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNRITNSDVYAADQLFATLDPTLRKLELGDVGSVILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSA 264 ++ H L T + LH++ A L+EN++ Q +L E+ A Sbjct: 257 RHLPHDLVAAFKATLTETREADLQLHVIDAADSRLQENIEQV-QSVLKEIEA 307 >gi|297264340|ref|XP_001088145.2| PREDICTED: obg-like ATPase 1-like isoform 4 [Macaca mulatta] Length = 398 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 17/98 (17%) Query: 170 AGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI-----------------LAD 212 A KSTF +T ++ ++PF T+ PN V + F + D Sbjct: 35 ARKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKIPAFLNVVD 94 Query: 213 IPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 I G++K AH G G+G+ FL H + H+ A E++ Sbjct: 95 IAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDD 132 >gi|312114468|ref|YP_004012064.1| GTP-binding protein YchF [Rhodomicrobium vannielii ATCC 17100] gi|311219597|gb|ADP70965.1| GTP-binding protein YchF [Rhodomicrobium vannielii ATCC 17100] Length = 367 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 18/100 (18%) Query: 163 GIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVK-----------------EG 204 GI+GLPN GKST F A A + A+YPF T+ PN+G V Sbjct: 6 GIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGEVSVPDERLQKIAAAAKSAAII 65 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 DI G+++ A +G G+G++FL + + +++ Sbjct: 66 PTRLTFVDIAGLVRGASKGEGLGNKFLANIRECDAIAYVL 105 >gi|261204297|ref|XP_002629362.1| nucleolar GTP-binding protein [Ajellomyces dermatitidis SLH14081] gi|239587147|gb|EEQ69790.1| nucleolar GTP-binding protein [Ajellomyces dermatitidis SLH14081] Length = 664 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL ++T+A + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLRNITKADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC + D++ +NS KI + Sbjct: 232 MNTIE-----MQSITAIAHLRSAILYFMDLSEQCGYSVTDQIKLFNSIKPLFANKIVFIV 286 Query: 278 LSQIDTVDSDTL-ARKKNELAT--QCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + + L A + EL + + G V + S T G+ + D++ + R Sbjct: 287 VNKIDIMRPEDLDASTQAELQSILKPGDVEMLQVSCTTTEGVTTVKNAACDRLLAER 343 >gi|212542929|ref|XP_002151619.1| GTP-binding protein YchF [Penicillium marneffei ATCC 18224] gi|210066526|gb|EEA20619.1| GTP-binding protein YchF [Penicillium marneffei ATCC 18224] Length = 394 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST ++T+ A++P+ T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITKCSLGNPANFPYATIDPEEARVIVPDARYDWLCEQYKPKSRV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPVRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L+ + ELR K IE V Sbjct: 144 -LNIISEELRLKDIEFV 159 >gi|125809304|ref|XP_001361069.1| GA21331 [Drosophila pseudoobscura pseudoobscura] gi|54636242|gb|EAL25645.1| GA21331 [Drosophila pseudoobscura pseudoobscura] Length = 653 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 87/184 (47%), Gaps = 15/184 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ + Sbjct: 171 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC--ILDELSAYNSELR----KKIEI 275 + +R + + L H+ + + + + QC L+E A ++ K I Sbjct: 230 ----LEERNVIEMQAITALAHLRACVLYFMDISEQCGHSLEEQVALFESIKPLFTNKPLI 285 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQ---VP-FEFSSITGHGIPQILECLHDKIFSIRG 331 + ++++D + + L +++ E+ T+ + VP S++ G+ ++ +++ S R Sbjct: 286 LAINKVDILMPEDLPKERQEIITKLQEDKNVPVILMSTVQETGVMEVKTEACERLLSYRV 345 Query: 332 ENEF 335 + + Sbjct: 346 DQKM 349 >gi|269137711|ref|YP_003294411.1| GTP-binding protein HflX [Edwardsiella tarda EIB202] gi|267983371|gb|ACY83200.1| GTP-binding protein HflX [Edwardsiella tarda EIB202] gi|304557765|gb|ADM40429.1| GTP-binding protein HflX [Edwardsiella tarda FL6-60] Length = 426 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 6/108 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T A AD F TL P L V+ +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNTLTSATVYAADQLFATLDPTLRRVEVNDVGPTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILD 260 ++ H L T + +LLH+V A ++EN+ A + D Sbjct: 257 RHLPHDLVAAFKATLLETRQASLLLHVVDASDTRVDENIDAVNTVLAD 304 >gi|58040242|ref|YP_192206.1| GTP-binding protein Era [Gluconobacter oxydans 621H] gi|58002656|gb|AAW61550.1| GTP-binding protein [Gluconobacter oxydans 621H] Length = 295 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 23/171 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PNAGKST L + AK I TT + LGIV + + IL D+PGI K Sbjct: 8 VALVGAPNAGKSTLLNRIAGAKLSIVSPKAQTTRFRTLGIVMQDNAQIILVDLPGIFKPR 67 Query: 221 HQGAGIGDRFL--------KHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 + DR + + + T +L+ S L E+V+ E+ A +E + + Sbjct: 68 RR----LDRAMVNAAWSGSQDADLTLLLVDAKSGLREDVR--------EIIAKLAESKNR 115 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECL 322 I +V L++ D V+ L E++ + F S+ +G G+ ++ L Sbjct: 116 IWLV-LNKTDLVERGELLPLTQEISGLINVEHVFMLSARSGEGVSDLMARL 165 >gi|301064107|ref|ZP_07204554.1| GTP-binding protein HflX [delta proteobacterium NaphS2] gi|300441727|gb|EFK06045.1| GTP-binding protein HflX [delta proteobacterium NaphS2] Length = 423 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 10/146 (6%) Query: 154 LKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILAD 212 L+ + +IG++G NAGKST +TRA + D F TL + + KE +++D Sbjct: 199 LRKQTCRNIGLVGYTNAGKSTLFNRLTRADVLMEDKLFATLDSTSRALPLHNNKEAVISD 258 Query: 213 IPGIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSE 268 G I N H LK E +L+H+ +EN + A + +L + A Sbjct: 259 TVGFISNLPHHLVASFRATLKEAEEADLLIHVADISDENYEKHIADVETVLKSIDADQIP 318 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKN 294 ++ ++ID V DT+ +N Sbjct: 319 -----HMLVFNKIDRVSKDTIKGTRN 339 >gi|121702029|ref|XP_001269279.1| GTP-binding protein YchF [Aspergillus clavatus NRRL 1] gi|119397422|gb|EAW07853.1| GTP-binding protein YchF [Aspergillus clavatus NRRL 1] Length = 394 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST ++T++ A++P+ T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITKSSLGNPANFPYATIDPEEARVIVPDERFDWLCEHYKPKSQV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPVRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L+ + ELR K IE V Sbjct: 144 -LNIISEELRIKDIEFV 159 >gi|269127476|ref|YP_003300846.1| GTP-binding proten HflX [Thermomonospora curvata DSM 43183] gi|268312434|gb|ACY98808.1| GTP-binding proten HflX [Thermomonospora curvata DSM 43183] Length = 485 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 9/173 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 I + I G NAGKS+ L +T A + D F TL P + + + F LAD G + Sbjct: 262 IPSVAIAGYTNAGKSSLLNRLTGAGVLVEDALFATLDPTVRRAQTPSGRPFTLADTVGFV 321 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ HQ L+ + ++LH+V + +A + L ++ + E+V Sbjct: 322 RHLPHQLVEAFRSTLEEVTQADLILHVVDGSDAEPEAQIDAVRQVLREIGAD--RVPELV 379 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 +++ D D TLAR + + G V S+ TG GI +++ + ++ + Sbjct: 380 VINKADAADPLTLARLRRR---EPGSVV--VSARTGAGIEELMAAIEAELPEV 427 >gi|317052072|ref|YP_004113188.1| GTP-binding proten HflX [Desulfurispirillum indicum S5] gi|316947156|gb|ADU66632.1| GTP-binding proten HflX [Desulfurispirillum indicum S5] Length = 433 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 7/128 (5%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 A I ++G NAGKST ++T + D F TL P + + G + LAD G I+ Sbjct: 209 ATISLVGYTNAGKSTLFNALTTSTVYAHDQLFATLDPTIRSLSLPGMPDAFLADTVGFIR 268 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + H L+ T + +LLH++ A E ++ + +L L + IE+ Sbjct: 269 HLPHTLVAAFRSTLQETRESTLLLHVMDASHEELERNRESVLKVLEDIEA-----IEVAQ 323 Query: 278 LSQIDTVD 285 L ++ +D Sbjct: 324 LEVMNKID 331 >gi|91204564|emb|CAJ70792.1| similar to ATP/GTP-binding protein [Candidatus Kuenenia stuttgartiensis] Length = 431 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 12/174 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII-KN 219 + I+G NAGKST + ++T + D F TL GI K E K +++D G I K Sbjct: 205 VSIVGYTNAGKSTLMNALTDVDAMVEDKLFATLDTKTGICKLENSKNILISDTVGFIQKL 264 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H L+ T +LLH+ ++ + + L E KK I+ L+ Sbjct: 265 PHYLVSSFKATLEETRNADILLHVADISSPHIHKQIESVNIVLKELGCE--KKPTIIVLN 322 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIP----QILECLHDKIFSI 329 +ID + +++ C S+ T GIP +I E L ++ +I Sbjct: 323 KIDALKDESVIPLLKNRYKNC----IVISAKTCQGIPALKQKIAEILEKRLLNI 372 >gi|327354886|gb|EGE83743.1| nucleolar GTP-binding protein [Ajellomyces dermatitidis ATCC 18188] Length = 664 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL ++T+A + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLRNITKADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC + D++ +NS KI + Sbjct: 232 MNTIE-----MQSITAIAHLRSAILYFMDLSEQCGYSVTDQIKLFNSIKPLFANKIVFIV 286 Query: 278 LSQIDTVDSDTL-ARKKNELAT--QCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + + L A + EL + + G V + S T G+ + D++ + R Sbjct: 287 VNKIDIMRPEDLDASTQAELQSILKPGDVEMLQVSCTTTEGVTTVKNAACDRLLAER 343 >gi|302406278|ref|XP_003000975.1| GTP-binding protein RBG1 [Verticillium albo-atrum VaMs.102] gi|261360233|gb|EEY22661.1| GTP-binding protein RBG1 [Verticillium albo-atrum VaMs.102] Length = 350 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 39/73 (53%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 +A +G IG P+ GKST ++ +T + A Y FTTL G V + D+PGII+ Sbjct: 63 VASVGFIGFPSVGKSTLMSRLTGQHSEAAAYEFTTLTSVPGQVVYNGAPLQIIDLPGIIE 122 Query: 219 NAHQGAGIGDRFL 231 A G G G + + Sbjct: 123 GAKDGRGRGRQVI 135 >gi|115384488|ref|XP_001208791.1| nucleolar GTP-binding protein 1 [Aspergillus terreus NIH2624] gi|114196483|gb|EAU38183.1| nucleolar GTP-binding protein 1 [Aspergillus terreus NIH2624] Length = 657 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL S+TRA + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLRSITRADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC + D++ ++S KI + Sbjct: 232 MNTIE-----MQSITAIAHLRSAVMYFMDLSEQCGYSVADQIKLFHSIRPLFANKIVFLV 286 Query: 278 LSQIDTVDSDTLARKKNELAT---QCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + L + E + G V + S T G+ + DK+ + R Sbjct: 287 VNKIDVRRPEDLEPEYQEALQNILKSGDVELLQLSCTTTEGVTNVKNAACDKLLAER 343 >gi|330830064|ref|YP_004393016.1| GTP-binding protein engA [Aeromonas veronii B565] gi|328805200|gb|AEB50399.1| GTP-binding protein engA [Aeromonas veronii B565] Length = 498 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 13/163 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G K G EFI+ D G I Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGELEFIVVDTGG-IDGT 63 Query: 221 HQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A + AA Q I + L + KK+ +V Sbjct: 64 EEGIELKMAEQSLLAIEEADVVLFMVDA-RAGLTAADQAIAEHLRKAH----KKVFLVA- 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 ++ D +D D+ + LA G+V ++ ++ G G+ +LE Sbjct: 118 NKTDGIDGDSAVSEFYGLA--LGEV-YQIAAAHGRGVLSLLEL 157 >gi|325579068|ref|ZP_08149024.1| GTP-binding protein HflX [Haemophilus parainfluenzae ATCC 33392] gi|325159303|gb|EGC71437.1| GTP-binding protein HflX [Haemophilus parainfluenzae ATCC 33392] Length = 451 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 7/112 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T+A AD F TL P L ++ + ILAD G + Sbjct: 222 IPTISLVGYTNAGKSTLFNFITQANVYAADQLFATLDPTLRRLQIQDVGTAILADTVGFV 281 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSA 264 + H L+ T +LLH++ A + EN++A +L+E+ A Sbjct: 282 RQLPHDLVSAFKSTLQETVEASLLLHVIDAADARKIENIEAV-NLVLEEIKA 332 >gi|195027788|ref|XP_001986764.1| GH21544 [Drosophila grimshawi] gi|193902764|gb|EDW01631.1| GH21544 [Drosophila grimshawi] Length = 652 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 86/184 (46%), Gaps = 15/184 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ + Sbjct: 171 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + +R + + L H+ + + + + QC + D++ + S K I Sbjct: 230 ----LEERNVIEMQAITALAHLRACVLYFMDISEQCGHSLEDQVQLFESIKPLFTNKPLI 285 Query: 276 VGLSQIDTVDSDTLARKKNELATQC---GQVPFEF-SSITGHGIPQILECLHDKIFSIRG 331 + ++++D + + L ++ + T+ QVP + S++ G+ ++ +++ S R Sbjct: 286 LAINKVDILTPEDLPAERRAIITKLEEDKQVPVMYMSTVQETGVMEVKTEACERLLSYRV 345 Query: 332 ENEF 335 + + Sbjct: 346 DQKM 349 >gi|332297854|ref|YP_004439776.1| ferrous iron transport protein B [Treponema brennaborense DSM 12168] gi|332180957|gb|AEE16645.1| ferrous iron transport protein B [Treponema brennaborense DSM 12168] Length = 714 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 14/159 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T +T + + ++P T+ G +K GY + + D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNVLTGSNQFVGNWPGVTVEKKEGKLK-GYTDVTVMDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ER V+L+I+ + LE N+ Q L EL +V + Sbjct: 64 YTQEEVVSRNYLVNERPDVILNIIDGTNLERNLYLTTQ--LAELGIP--------MVVAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQ 317 + +D V + K L+ Q G FE S++ G GI + Sbjct: 114 NMMDIVKRNGDVIHKEALSKQIGCPVFEISALKGTGIAE 152 >gi|37222111|gb|AAP49305.1| Uvs062 [uncultured bacterium] Length = 304 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 16/164 (9%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + A V I TT + LGIV + +L+D PGIIK A Sbjct: 19 VNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQLVLSDTPGIIKPA 78 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 ++ F+K E +L+++V E++++ DE + +N + KI ++ L Sbjct: 79 YEMQESMMNFVKSAFEDADILIYMVEIGEQDLK-------DE-AFFNKIIHAKIPVLLL- 129 Query: 280 QIDTVDSDTLARKKNELATQCGQVP----FEFSSITGHGIPQIL 319 ++ +D+ + + ++A +VP F S++ +P++ Sbjct: 130 -LNKIDNSNQEQLEEQVAFWKEKVPNAEIFPISALQNFNVPEVF 172 >gi|147919506|ref|YP_686754.1| GTP-binding protein [uncultured methanogenic archaeon RC-I] gi|110622150|emb|CAJ37428.1| conserved GTP-binding protein [uncultured methanogenic archaeon RC-I] Length = 425 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 11/162 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + + G NAGKST + ++ D FTTL P +++ G + +L D G IK+ Sbjct: 191 VALAGYTNAGKSTLMNALVGETVVAKDQLFTTLVPTTRMMEAGRRRVLLTDTVGFIKDLP 250 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI----EIV 276 H L+ +++ +V A E + +L++L+ + L KI I Sbjct: 251 HFMVEAFRSTLEEIYLADLIILVVDASEPP-----EVVLEKLATCHDTLWGKIGPIPVIT 305 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 L++ID +D TL R + + P S+ TG G+ ++ Sbjct: 306 ALNKIDKIDLPTLERTEAAIKNLAPH-PVAVSARTGDGLEEL 346 >gi|157124441|ref|XP_001654061.1| nucleolar GTP-binding protein [Aedes aegypti] gi|108874003|gb|EAT38228.1| nucleolar GTP-binding protein [Aedes aegypti] Length = 652 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 16/168 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ VTRA ++ Y FTT +G + Y + + D PGI+ + Sbjct: 171 IIICGFPNVGKSSFINKVTRADVEVQPYAFTTKSLYVGHMDYKYLRWQVIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + +R + + + H+ + + + + QC I ++ ++S K + Sbjct: 230 ----LEERNVIEMQAITAMAHLRACILYFMDVSEQCGHSIEEQAKLFDSIKPLFVNKPLL 285 Query: 276 VGLSQIDTVDSDTLARKKN----ELATQCGQVP-FEFSSITGHGIPQI 318 + L++ D + D LA +K +L + ++P + S++T G+ ++ Sbjct: 286 LVLNKTDILTLDELAPEKKKIIEDLTDEAEEIPIMQMSTVTETGVIEV 333 >gi|238918369|ref|YP_002931883.1| GTPase HflX [Edwardsiella ictaluri 93-146] gi|238867937|gb|ACR67648.1| GTP-binding protein HflX, putative [Edwardsiella ictaluri 93-146] Length = 426 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 6/108 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T A AD F TL P L V+ +LAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNTLTSATVYAADQLFATLDPTLRRVEVNDVGPTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILD 260 ++ H L T + +LLH+V A ++EN+ A + D Sbjct: 257 RHLPHDLVAAFKATLLETRQASLLLHVVDASDARVDENIDAVNTVLAD 304 >gi|315042560|ref|XP_003170656.1| GTP-dependent nucleic acid-binding protein engD [Arthroderma gypseum CBS 118893] gi|311344445|gb|EFR03648.1| GTP-dependent nucleic acid-binding protein engD [Arthroderma gypseum CBS 118893] Length = 394 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------KEG 204 GI+GL N GKST ++T++ A++P+ T+ P V E Sbjct: 24 GIVGLANVGKSTLFQAITKSTLGNPANFPYATIDPEQARVIVPDERYDWLCKHYKPKSEV 83 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIVHVEGDVDPVRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L+ + ELR K IE V Sbjct: 144 -LNIISEELRIKDIEFV 159 >gi|237785456|ref|YP_002906161.1| bifunctional cytidylate kinase/GTP-binding protein [Corynebacterium kroppenstedtii DSM 44385] gi|237758368|gb|ACR17618.1| cytidylate kinase [Corynebacterium kroppenstedtii DSM 44385] Length = 784 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 72/178 (40%), Gaps = 25/178 (14%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKS+ L +T + + D TT+ P +V+ K + D GI K Sbjct: 525 VALVGKPNVGKSSLLNKMTGEDRAVVDDVAGTTVDPVDSLVELDQKTWTFVDTAGIRKKT 584 Query: 221 HQGAG----IGDRFLKHTERTHVLLHIVSALE---ENVQAAYQCILDELSAYNSELRKKI 273 + G G R + V++ IV A E E Q + ILD A Sbjct: 585 KKATGHEYYAGLRTRGAIDAAEVVVFIVDASEPVTEQDQRVLRMILDSGRAL-------- 636 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPF----EFSSITGHGI----PQILECLH 323 +V ++ D VD D E+ Q +P+ S+ TG I P ++E L Sbjct: 637 -VVAYNKWDMVDEDRRDMLDREIELQLSHIPWARRVNISAKTGRAIHKLEPAMIEALE 693 >gi|209694322|ref|YP_002262250.1| GTP-binding protein EngA [Aliivibrio salmonicida LFI1238] gi|238058970|sp|B6EGZ1|DER_ALISL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|208008273|emb|CAQ78418.1| GTP-binding protein [Aliivibrio salmonicida LFI1238] Length = 500 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 13/167 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST VTR + +AD+P T G K +EFIL D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRVTRTRDALVADFPGLTRDRKYGRAKLEEQEFILIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L +V A DE A + R+K Sbjct: 60 IDGTEEGVETKMAEQSLAAIEEADVVLFMVDG------RAGLTSSDEAIAKHLRSREKPT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 + +++ID +D+D + + +L ++ ++ G G+ +LE Sbjct: 114 FLVVNKIDGIDADAASAEFWQLGMSK---VYQIAASHGRGVTSLLEL 157 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 21/179 (11%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTT---LYPNLGIVKEGYKEFILADIPGII 217 + IIG PN GKST + + + + D P TT +Y + + +EG +E++L D G+ Sbjct: 213 LAIIGRPNVGKSTLINRILGEERVVVYDMPGTTRDSIY--IPMEREG-QEYVLIDTAGVR 269 Query: 218 KNAHQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 + + + LK E +V+L ++ A E + L+A S Sbjct: 270 RRGRINETVEKFSVIKTLKAIEDANVVLLVIDARENISDQDLSLLGFALNAGRS------ 323 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHDKIFS 328 ++ +++ D ++++ + K+EL + G V F S++ G G+ + E + + S Sbjct: 324 LVIAVNKWDGLNNEVKEKVKSELDRRLGFVDFARLHFISALHGTGVGHLYESVQEAYVS 382 >gi|300712028|ref|YP_003737842.1| GTP-binding protein [Halalkalicoccus jeotgali B3] gi|299125711|gb|ADJ16050.1| GTP-binding protein [Halalkalicoccus jeotgali B3] Length = 318 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 33/56 (58%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I + G PN GKSTF+ VT A+ + A YPFTT +G + + + L D PG++ Sbjct: 158 IVVAGYPNVGKSTFVNDVTNARHETATYPFTTKGIGVGHLTRDHIRYQLVDTPGVL 213 >gi|238586318|ref|XP_002391136.1| hypothetical protein MPER_09476 [Moniliophthora perniciosa FA553] gi|215455413|gb|EEB92066.1| hypothetical protein MPER_09476 [Moniliophthora perniciosa FA553] Length = 176 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 2/96 (2%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 FLD + +R G GG G +F REKF+ FG P GG+GGRGGDV+I T L TL Sbjct: 60 FLDHLIITVRGGKGGDGCAAFHREKFLPFGPPSGGNGGRGGDVYILPTPELTTLSSV--A 117 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 + + + G G ++G G +V+ VP+GT V E Sbjct: 118 KRVRGEQGSHGQGTWQNGKNGAPLVIKVPLGTIVRE 153 >gi|225850095|ref|YP_002730329.1| GTP-binding protein HflX [Persephonella marina EX-H1] gi|225644920|gb|ACO03106.1| GTP-binding protein HflX [Persephonella marina EX-H1] Length = 373 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 21/135 (15%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL--------YPNLGIVKEGYKEFIL 210 I + ++G NAGKST L +T+ ++D F TL +P++G K+ ++ Sbjct: 194 ILKVSLVGYTNAGKSTLLKKLTKRDTFVSDQLFATLDTKTSYIAFPDIG------KKVLI 247 Query: 211 ADIPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS 267 D G +KN + + D F L+ E ++LH++ +EN + + D L N Sbjct: 248 TDTVGFVKNMPK--ELMDAFMATLEELEDADLILHVIDISDENWVEKMEAVEDILKKIN- 304 Query: 268 ELRKKIEIVGLSQID 282 + K +V L++ID Sbjct: 305 -VSDKPLVVVLNKID 318 >gi|150401230|ref|YP_001324996.1| small GTP-binding protein [Methanococcus aeolicus Nankai-3] gi|150013933|gb|ABR56384.1| small GTP-binding protein [Methanococcus aeolicus Nankai-3] Length = 338 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 16/103 (15%) Query: 146 LGQEKIIWL-KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG 204 + +EK+ L +K + + I G PN GKST L +T A+P+I YPFTT N+G G Sbjct: 159 VAREKLKNLPTVKDMPTVVIAGYPNVGKSTLLRKLTNAEPEINAYPFTTKGLNVGYSDYG 218 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 + D PG++ DR + ER + LH V AL Sbjct: 219 IQ---FVDTPGVL----------DRPI--YERNDIELHAVVAL 246 >gi|312128081|ref|YP_003992955.1| gtp-binding proten hflx [Caldicellulosiruptor hydrothermalis 108] gi|311778100|gb|ADQ07586.1| GTP-binding proten HflX [Caldicellulosiruptor hydrothermalis 108] Length = 509 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 9/133 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA- 220 + IIG NAGKST + +++A + D F TL V KEF+L D G I+N Sbjct: 353 VSIIGYTNAGKSTLMNRISKADVLVEDKLFATLDTTTRRVYHKGKEFLLTDTVGFIRNLP 412 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRK---KI 273 H L+ + ++++L++V + ++++ + + +L +L A N L + KI Sbjct: 413 HHLVEAFSSTLEEVKYSNLILNVVDISDPYYYDHIKVS-EDLLKQLGAENIPLIRVYNKI 471 Query: 274 EIVGLSQIDTVDS 286 + V LS +D D+ Sbjct: 472 DKVDLSSVDVFDN 484 >gi|256369100|ref|YP_003106608.1| GTP-binding protein Era [Brucella microti CCM 4915] gi|255999260|gb|ACU47659.1| GTP-binding protein Era [Brucella microti CCM 4915] Length = 311 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 35/181 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST + + K I + TT GI EG +L D PGI + Sbjct: 22 VALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPALIVLVDTPGIFRPK 81 Query: 221 HQGAGIGDRFLKHT-----ERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKK 272 + DR + T + ++L I+ A EN +A + + D +R+K Sbjct: 82 RR----LDRAMVTTAWGGAKDADIILVIIDAQGGFNENAEALLESMKD--------VRQK 129 Query: 273 IEIVGLSQIDTVDSD---TLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHDK 325 +++ L+++D VD +LA+K NEL VPF+ S++ G G + + L + Sbjct: 130 -KVLVLNKVDRVDPPVLLSLAQKANEL------VPFDRTFMISALNGSGCKDLAKYLAES 182 Query: 326 I 326 + Sbjct: 183 V 183 >gi|323490066|ref|ZP_08095287.1| GTP-binding protein Era-like protein (Bex protein) [Planococcus donghaensis MPA1U2] gi|323396362|gb|EGA89187.1| GTP-binding protein Era-like protein (Bex protein) [Planococcus donghaensis MPA1U2] Length = 305 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 21/174 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I IIG PN GKSTFL V K I +D P TT G+V + I D PGI + Sbjct: 13 ISIIGRPNVGKSTFLNRVVGQKIAIMSDKPQTTRNKVQGVVTTNDSQMIFIDTPGINEPR 72 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD LK + T VLL + S ++ V + +L+ L + + + Sbjct: 73 HK---LGDFMLKVAKNTFREVDVLLFVASGVDR-VGKEDRYVLEMLKGIDVPV-----FL 123 Query: 277 GLSQIDTVDSDTLAR----KKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + +NE +P S++ G+ + +L +++++ Sbjct: 124 VINKIDQVHPDNLPKIIESYRNEFDF-AEAIP--ISALEGNNVETLLAKINERL 174 >gi|210617942|ref|ZP_03291828.1| hypothetical protein CLONEX_04060 [Clostridium nexile DSM 1787] gi|210149081|gb|EEA80090.1| hypothetical protein CLONEX_04060 [Clostridium nexile DSM 1787] Length = 416 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 12/136 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKN- 219 I I+G NAGKST L ++T A D F TL P +K K E +L D G I+ Sbjct: 204 IAIVGYTNAGKSTLLNTLTGADVLEEDKLFATLDPTTRNLKLPSKQEVLLTDTVGFIRKL 263 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKIEI 275 H L+ + ++LH+V A ++E + Y+ ++ N E++ K I Sbjct: 264 PHHLIEAFKSTLEEAKYADIILHVVDASNPQMDEQMYIVYETLM------NLEVKNKPVI 317 Query: 276 VGLSQIDTVDSDTLAR 291 ++ D VD + + R Sbjct: 318 TAFNKQDKVDGEVILR 333 >gi|50312371|ref|XP_456219.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49645355|emb|CAG98927.1| KLLA0F25564p [Kluyveromyces lactis] Length = 409 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 18/106 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYP-------------NLGIVKEGYKE- 207 GI+GL N GKSTF ++T++K A+YPF T+ P +L + E K+ Sbjct: 25 GIVGLANVGKSTFFQAITKSKLGNPANYPFATIEPEESKVIVPSFKLDHLHKLYESQKKI 84 Query: 208 ---FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G+ + A G G+G++FL + +V E + Sbjct: 85 PATLSIFDIAGLTRGASSGEGLGNKFLNDIRHVDGIYQVVRGFEND 130 >gi|54295993|ref|YP_122362.1| hypothetical protein lpp0010 [Legionella pneumophila str. Paris] gi|53749778|emb|CAH11158.1| hypothetical protein lpp0010 [Legionella pneumophila str. Paris] Length = 414 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 5/110 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + ++G NAGKST +T +AD F TL P + ++ G ILAD G I++ Sbjct: 200 VSLVGYTNAGKSTLFNVLTGEHTYVADQLFATLDPTMRKLELPGSSAAILADTVGFIRDL 259 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYN 266 H L+ T++ +LLH++ + N + Q +LDEL N Sbjct: 260 PHHLVEAFRATLEETQQADLLLHVIDISDPNWRETVFEVQKVLDELKVSN 309 >gi|166032652|ref|ZP_02235481.1| hypothetical protein DORFOR_02367 [Dorea formicigenerans ATCC 27755] gi|166027009|gb|EDR45766.1| hypothetical protein DORFOR_02367 [Dorea formicigenerans ATCC 27755] Length = 681 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 13/131 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I ++G IG PN GK+T + T A K+A++P T+ G ++F L D+PGI Sbjct: 4 IINVGFIGNPNCGKTTLFNAYTGANLKVANWPGVTVEKKEGFTTYEDQKFRLIDLPGIYS 63 Query: 219 -NAHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEI 275 ++ R ++ V++ ++ S+LE N+ A Q I EL K + + Sbjct: 64 LTSYTMEETVSRECIMSDEVDVIVDVIDASSLERNLYLALQLI---------ELGKPV-V 113 Query: 276 VGLSQIDTVDS 286 + L+ +D V+S Sbjct: 114 LALNMMDIVES 124 >gi|88604166|ref|YP_504344.1| GTP-binding protein, HSR1-like protein [Methanospirillum hungatei JF-1] gi|88189628|gb|ABD42625.1| GTP-binding protein, HSR1-related protein [Methanospirillum hungatei JF-1] Length = 324 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 3/66 (4%) Query: 155 KLKLIADIGII---GLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILA 211 KL + D+ I G PN GKS+F+ V+ A+P++A YPFTT +G +++ L Sbjct: 149 KLPTVEDVFTIVVAGFPNVGKSSFIRRVSSAEPEVASYPFTTKGIIVGHYYHRHEKVQLI 208 Query: 212 DIPGII 217 D PG++ Sbjct: 209 DTPGVL 214 >gi|320108428|ref|YP_004184018.1| GTP-binding proten HflX [Terriglobus saanensis SP1PR4] gi|319926949|gb|ADV84024.1| GTP-binding proten HflX [Terriglobus saanensis SP1PR4] Length = 500 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 22/176 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 + + ++G NAGKST ++T A + F TL P L V ++ +L+D G I Sbjct: 249 VPTVALVGYTNAGKSTLFNALTEAGVLASSRMFATLDPKLRQFVLPSRRKVLLSDTVGFI 308 Query: 218 KNAHQGAGIGDR-FLKHTERTHVLLHI---VSALEENVQAAYQCILDELSAYNSELRKKI 273 +N R L+ ER +LLH+ SA+ E + + +L EL + +I Sbjct: 309 RNLPHALVTSFRATLEEVERAELLLHVRDASSAILEEQKMQVEAVLAELEVART---PRI 365 Query: 274 EIVGLSQIDTV---DSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E+ L++ID + + L +K+ +A S+ G G+ ++ + D+I Sbjct: 366 EV--LNKIDLLSEPEQQALLGRKDVIA---------ISAAKGVGLDVLIAAIEDRI 410 >gi|148358150|ref|YP_001249357.1| GTP binding protein HflX [Legionella pneumophila str. Corby] gi|296105508|ref|YP_003617208.1| GTPase [Legionella pneumophila 2300/99 Alcoy] gi|148279923|gb|ABQ54011.1| GTP binding protein HflX [Legionella pneumophila str. Corby] gi|295647409|gb|ADG23256.1| GTPase [Legionella pneumophila 2300/99 Alcoy] Length = 414 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 5/110 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + ++G NAGKST +T +AD F TL P + ++ G ILAD G I++ Sbjct: 200 VSLVGYTNAGKSTLFNVLTGEHTYVADQLFATLDPTMRKLELPGSSAAILADTVGFIRDL 259 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYN 266 H L+ T++ +LLH++ + N + Q +LDEL N Sbjct: 260 PHHLVEAFRATLEETQQADLLLHVIDISDPNWRETVFEVQKVLDELKVSN 309 >gi|332375296|gb|AEE62789.1| unknown [Dendroctonus ponderosae] Length = 357 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 33/196 (16%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII-KN 219 +GI+G+PN+GKST + + R + TT + I+ G + + D PG+I +N Sbjct: 48 VGIMGVPNSGKSTIINHLMDRKACPTSSKVHTTRSAAMAIITLGDTQIVFLDTPGLINEN 107 Query: 220 AHQGAGIGDRFLKHTERT--------------------HVLLHIVSALEENVQAAYQCIL 259 + + + FLK ++R + + I++ LE N IL Sbjct: 108 EKKRFNLENSFLKDSKRALREADIVGVIHDVSNSHTRDRLDIKIINLLESNKDKPSILIL 167 Query: 260 DELSAYNSELRKKIEIVGLSQIDTVD----------SDTLARKKNELATQCGQVPFEFSS 309 +++ S+ RK ++I L + VD S L +K A + F S+ Sbjct: 168 NKIDMLKSK-RKLLDITRLLTDNCVDGKPIPGHQQHSIKLQFEKETKAWPYFKDIFMVSA 226 Query: 310 ITGHGIPQILECLHDK 325 +TG G+P++ + L DK Sbjct: 227 LTGDGLPEVKKYLVDK 242 >gi|170594998|ref|XP_001902207.1| Hypothetical GTP-binding protein C02F5.3 in chromosome III, putative [Brugia malayi] gi|158590241|gb|EDP28943.1| Hypothetical GTP-binding protein C02F5.3 in chromosome III, putative [Brugia malayi] Length = 367 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 2/121 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L+S+T + A Y FTTL G+++ L D+PGII+ Sbjct: 64 ARVAMVGFPSVGKSTLLSSLTTTESVAASYEFTTLTCIPGVIEYEGANIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A QG G G + + ++L ++ A + +Q A + EL + L KK ++ Sbjct: 124 AAQGKGRGRQVIAVARTADIILMMLDAAKGEMQKAL--LSKELESMGIRLNKKPPLIYFK 181 Query: 280 Q 280 Q Sbjct: 182 Q 182 >gi|119173683|ref|XP_001239251.1| conserved hypothetical protein [Coccidioides immitis RS] Length = 394 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST ++T+ A++P+ T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITKCSLGNPANFPYATIDPEEARVIVPDERYDWLCEHYKPKSQV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPVRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L + ELR K IE V Sbjct: 144 -LEIISEELRIKDIEFV 159 >gi|77166047|ref|YP_344572.1| GTP-binding protein, HSR1-related [Nitrosococcus oceani ATCC 19707] gi|254436383|ref|ZP_05049889.1| GTP-binding proten HflX [Nitrosococcus oceani AFC27] gi|76884361|gb|ABA59042.1| GTP-binding protein HflX [Nitrosococcus oceani ATCC 19707] gi|207088073|gb|EDZ65346.1| GTP-binding proten HflX [Nitrosococcus oceani AFC27] Length = 382 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 2/93 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGII 217 + + ++G NAGKST +T A+ + D F TL P L ++ + ILAD G I Sbjct: 202 VPTVSLVGYTNAGKSTLFNRLTAARVLVDDRLFATLDPTLRRLRLALTQPLILADTVGFI 261 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 +N H L+ T +LLH++ A E Sbjct: 262 RNLPHDLVEAFRSTLEETRDAALLLHVIDASSE 294 >gi|291276928|ref|YP_003516700.1| GTP-binding protein ERA [Helicobacter mustelae 12198] gi|290964122|emb|CBG39966.1| GTP-binding protein ERA homolog [Helicobacter mustelae 12198] Length = 304 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 27/176 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV----KEGYK-EFILADIPGI 216 +G+IG PN GKSTFL + + + + + + ++G + + I D PG+ Sbjct: 12 VGVIGKPNVGKSTFLNKIIGQQIALVSHKANATRKRMNFIIPFEEDGIQSQIIFVDTPGL 71 Query: 217 IKNAHQGAGIGDRF-LKHTERTH----VLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 ++GA + + F LK R H ++L I+SA + + Y+ E A+N+ Sbjct: 72 ----YEGAKLLNVFMLKEAMRAHQESDLILFIISATDPYARQTYE----EFLAFNAN--- 120 Query: 272 KIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF----EFSSITGHGIPQILECLH 323 K I+ L++ID +D L + + QC Q F FS+ +L +H Sbjct: 121 KPHIILLNKIDLIDKKKLLSLLD--SYQCHQDKFLAIIPFSAKKDEDFSALLRVIH 174 >gi|303324391|ref|XP_003072183.1| GTP-binding family protein [Coccidioides posadasii C735 delta SOWgp] gi|240111893|gb|EER30038.1| GTP-binding family protein [Coccidioides posadasii C735 delta SOWgp] gi|320037219|gb|EFW19157.1| GTP-binding protein YchF [Coccidioides posadasii str. Silveira] Length = 394 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST ++T+ A++P+ T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITKCSLGNPANFPYATIDPEEARVIVPDERYDWLCEHYKPKSQV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ + D Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPVRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L + ELR K IE V Sbjct: 144 -LEIISEELRIKDIEFV 159 >gi|222528817|ref|YP_002572699.1| GTP-binding proten HflX [Caldicellulosiruptor bescii DSM 6725] gi|222455664|gb|ACM59926.1| GTP-binding proten HflX [Caldicellulosiruptor bescii DSM 6725] Length = 509 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 26/174 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + IIG NAGKST + +++A + D F TL V KEF+L D G I+N Sbjct: 353 VSIIGYTNAGKSTLMNRISKADVLVEDKLFATLDTTTRRVYHKGKEFLLTDTVGFIRNLP 412 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRK---KI 273 H L+ + ++++L++V + ++++ + + +L L A N L + KI Sbjct: 413 HHLVEAFSSTLEEVKYSNLILNVVDVSDPFYYDHIKVS-EDLLKLLGAENIPLIRVYNKI 471 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILECLHDKI 326 + V LS +D D+ VP F S+ G GI +L+ + ++I Sbjct: 472 DKVDLSSVDVFDN----------------VPHVFISAQDGRGIDTLLDMIIERI 509 >gi|91087227|ref|XP_975491.1| PREDICTED: similar to Probable nucleolar GTP-binding protein 1 [Tribolium castaneum] gi|270009559|gb|EFA06007.1| hypothetical protein TcasGA2_TC008833 [Tribolium castaneum] Length = 642 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 15/184 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + I G PN GKS+F+ +TRA ++ Y FTT +G + Y + + D PGI+ ++ Sbjct: 171 VIICGFPNVGKSSFMNKITRADVEVQPYAFTTKSLYVGHMDYKYLRWQVIDTPGILDHS- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC--ILDE----LSAYNSELRKKIEI 275 + +R + + L H+ + + + + QC L+E + K I Sbjct: 230 ----LEERNVIEMQAVTALAHLRACVLYFLDPSEQCGHTLEEQVRLFESIKPLFANKPLI 285 Query: 276 VGLSQIDTVDSDTLARKKNELATQC---GQVP-FEFSSITGHGIPQILECLHDKIFSIRG 331 V +++D V L +K ++ VP E S++T G+ ++ + + S R Sbjct: 286 VVANKVDIVQISELPDEKQQVLKSLKDDSSVPIMEMSTVTDTGVMEVKTEACETLLSFRV 345 Query: 332 ENEF 335 + + Sbjct: 346 DQKM 349 >gi|296445792|ref|ZP_06887744.1| GTP-binding proten HflX [Methylosinus trichosporium OB3b] gi|296256620|gb|EFH03695.1| GTP-binding proten HflX [Methylosinus trichosporium OB3b] Length = 462 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 20/186 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFI------LADI 213 + ++G NAGKST +T+A D F TL P L ++ G K + ++D+ Sbjct: 220 VALVGYTNAGKSTLFNRLTKAGVLAEDMLFATLDPTLRQIRLPHGAKVLLSDTVGFISDL 279 Query: 214 PGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELR 270 P ++ A + L+ V+LH+ E+ +A + IL EL Sbjct: 280 PTMLITAFRAT------LEEVMLADVVLHVRDVSHEDWEAQAEDVEAILAELGLSGEAGA 333 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECLHDKIFSI 329 + +E+ ++ID +D + LA + G + P S++TG G+ +LE + ++ Sbjct: 334 RILEV--WNKIDALDPERLAALAVAAESAQGRERPSLVSALTGEGLEALLERIEQRLAEG 391 Query: 330 RGENEF 335 R E E Sbjct: 392 RVELEI 397 >gi|188581485|ref|YP_001924930.1| GTP-binding protein Era [Methylobacterium populi BJ001] gi|179344983|gb|ACB80395.1| GTP-binding protein Era [Methylobacterium populi BJ001] Length = 319 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 35/181 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG+PNAGKST L ++ AK I TT GIV EG + +L D PGI Sbjct: 29 VALIGVPNAGKSTLLNALVGAKVSIVSRKVQTTRALVRGIVMEGDAQVVLVDTPGIFAPK 88 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL--------DELSAYNSELR-- 270 + DR + H SA A C+L DE+ L Sbjct: 89 RR----LDRAMVH-----------SAWSGAADADAVCLLIDARKGADDEVETILRRLPEV 133 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQC-GQVPFE----FSSITGHGIPQILECLHDK 325 K+ +I+ L++ID + + L EL + VPFE S++ G G+ + + L + Sbjct: 134 KRPKILILNKIDLIARERLL----ELVAKLNAMVPFEDTFLISALNGDGVADLRKALAAR 189 Query: 326 I 326 + Sbjct: 190 M 190 >gi|326573980|gb|EGE23929.1| GTP-binding proten HflX [Moraxella catarrhalis CO72] Length = 469 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T AD F TL P L VK G +LAD G + Sbjct: 207 IPTISLVGYTNAGKSTLFNRLTDDNIYAADQLFATLDPTLRRVKWPGVGNVVLADTVGFV 266 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ +LLH++ A E++ A + + D L ++ Sbjct: 267 RHLPHELVESFHATLEEALEADLLLHVIDAASEDMHAQIEAVNDVLEQIQAD 318 >gi|301155709|emb|CBW15177.1| predicted GTPase [Haemophilus parainfluenzae T3T1] Length = 451 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 7/112 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T+A AD F TL P L ++ + ILAD G + Sbjct: 222 IPTISLVGYTNAGKSTLFNFITQANVYAADQLFATLDPTLRRLQIQDIGTAILADTVGFV 281 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSA 264 + H L+ T +LLH++ A + EN++A +L+E+ A Sbjct: 282 RQLPHDLVSAFKSTLQETVEASLLLHVIDAADARKIENIEAV-NLVLEEIKA 332 >gi|310792100|gb|EFQ27627.1| nucleolar GTP-binding protein 1 [Glomerella graminicola M1.001] Length = 658 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 11/132 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+FL SV+RA + Y FTT +G Y F D PGI+ + + Sbjct: 172 VTGFPNVGKSSFLKSVSRADVDVQPYAFTTKSLFVGHFDYNYLRFQCIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC I +++ + S + KI + Sbjct: 232 MNTIE-----MQSVTAIAHLRSAIMYFMDLSEQCGYSIQAQINLFQSIKPLFQNKIVFIV 286 Query: 278 LSQIDTVDSDTL 289 +++ID V + L Sbjct: 287 INKIDVVKPEDL 298 >gi|325989409|ref|YP_004249108.1| translation-associated GTPase [Mycoplasma suis KI3806] gi|323574494|emb|CBZ40144.1| putative translation-associated GTPase [Mycoplasma suis] Length = 486 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 33/133 (24%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVK------------------ 202 +G++GLPN GKS+ ++ +AK +A +P++T+YP +V+ Sbjct: 5 VGLVGLPNVGKSSIFNLLSQKAKSTVASFPYSTIYPIHSLVELKNERLDELEELFLFLFR 64 Query: 203 ---------EGYKEFILADIPGII----KNAHQGAGIGDRFLKHTERTHVLLHIVSAL-E 248 + Y+ F D+ GI+ + + + +G FL H V++ +V + Sbjct: 65 ESLNKERLSKKYESFEFLDLAGIVPLDGEPDQKKSDMGAAFLSHIRAVDVIVLVVRTFTD 124 Query: 249 ENVQAAYQCILDE 261 E+V++ +DE Sbjct: 125 ESVESQLNVFVDE 137 >gi|170725905|ref|YP_001759931.1| GTP-binding protein EngA [Shewanella woodyi ATCC 51908] gi|238688689|sp|B1KLB1|DER_SHEWM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|169811252|gb|ACA85836.1| small GTP-binding protein [Shewanella woodyi ATCC 51908] Length = 488 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +ADYP T G EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ + E V+L + A + AA Q I + L R+K Sbjct: 60 IDGTEEGIETHMAEQSMAAIEEADVVLFLTDA-RAGLTAADQAISEHLRR-----REKTT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V +++D +D+D+ A G+V ++ ++ G G+ ++E Sbjct: 114 FVVANKVDGIDADSAC--AEFWALGLGEV-YQMAAAQGRGVTNMIE 156 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PN GKST + + + D P TT ++ +E++L D G+ + + Sbjct: 202 LAVIGKPNVGKSTLTNRILGEERVVVYDAPGTTRDSIYIPMERDGREYVLIDTAGVRRRS 261 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK E +V+L IV A E + + L+A + ++ Sbjct: 262 KVNETVEKFSVIKTLKAVEDCNVVLLIVDAREGIAEQDLGLLGFALNA------GRALVI 315 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D D R K+EL + G + F S++ G G+ + E + + Sbjct: 316 AVNKWDGIDQDIKDRVKSELDRRLGFIDFARIHFISALHGTGVGHLFESVQE 367 >gi|54292974|ref|YP_125389.1| hypothetical protein lpl0010 [Legionella pneumophila str. Lens] gi|53752806|emb|CAH14240.1| hypothetical protein lpl0010 [Legionella pneumophila str. Lens] Length = 414 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 5/110 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + ++G NAGKST +T +AD F TL P + ++ G ILAD G I++ Sbjct: 200 VSLVGYTNAGKSTLFNVLTGEHTYVADQLFATLDPTMRKLELPGSSAAILADTVGFIRDL 259 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYN 266 H L+ T++ +LLH++ + N + Q +LDEL N Sbjct: 260 PHHLVEAFRATLEETQQADLLLHVIDISDPNWRETVFEVQKVLDELKVNN 309 >gi|17987569|ref|NP_540203.1| GTP-binding protein Era [Brucella melitensis bv. 1 str. 16M] gi|256044359|ref|ZP_05447263.1| GTP-binding protein Era [Brucella melitensis bv. 1 str. Rev.1] gi|260563711|ref|ZP_05834197.1| GTP-binding protein era [Brucella melitensis bv. 1 str. 16M] gi|265990774|ref|ZP_06103331.1| GTP-binding protein era [Brucella melitensis bv. 1 str. Rev.1] gi|21263580|sp|Q8YG75|ERA_BRUME RecName: Full=GTPase Era gi|17983273|gb|AAL52467.1| gtp-binding protein era [Brucella melitensis bv. 1 str. 16M] gi|260153727|gb|EEW88819.1| GTP-binding protein era [Brucella melitensis bv. 1 str. 16M] gi|263001558|gb|EEZ14133.1| GTP-binding protein era [Brucella melitensis bv. 1 str. Rev.1] Length = 311 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 35/181 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST + + K I + TT GI EG + +L D PGI + Sbjct: 22 VALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPAQIVLVDTPGIFRPK 81 Query: 221 HQGAGIGDRFLKHT-----ERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKK 272 + DR + T + ++L I+ A EN +A + + D +R+K Sbjct: 82 RR----LDRAMVTTAWGGAKDADIILVIIDAQGGFNENAEALLESMKD--------VRQK 129 Query: 273 IEIVGLSQIDTVDSD---TLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHDK 325 +++ L+++D VD +LA+K N G VPF+ S++ G G + + L + Sbjct: 130 -KVLVLNKVDRVDPPVLLSLAQKAN------GLVPFDRTFMISALNGSGCKDLAKYLAES 182 Query: 326 I 326 + Sbjct: 183 V 183 >gi|289741765|gb|ADD19630.1| putative nucleolar GTP-binding protein [Glossina morsitans morsitans] Length = 655 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 86/184 (46%), Gaps = 15/184 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ + Sbjct: 171 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHL- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + +R + + L H+ + + + + QC + +++ + + K I Sbjct: 230 ----LEERNVIEMQAITALAHLRACVLYFMDISEQCGHSLEEQIKLFENIKPLFSNKPLI 285 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQ---VPFEF-SSITGHGIPQILECLHDKIFSIRG 331 + +++ID + D L +K EL + + VP F S++ G+ ++ +++ S R Sbjct: 286 MAVNKIDILGVDDLPSEKRELIQKLQEDKNVPVMFLSTVNETGVMEVKMEACERLLSYRV 345 Query: 332 ENEF 335 + + Sbjct: 346 DQKM 349 >gi|150399505|ref|YP_001323272.1| small GTP-binding protein [Methanococcus vannielii SB] gi|150012208|gb|ABR54660.1| small GTP-binding protein [Methanococcus vannielii SB] Length = 369 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 37/72 (51%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +G P+ GKST L +T A ++ Y FTTL G+++ + + D PGII Sbjct: 63 ATVAFVGFPSVGKSTLLNKITNANSEVGAYAFTTLTIIPGLMEHKGAKIQVLDAPGIISG 122 Query: 220 AHQGAGIGDRFL 231 A G G G L Sbjct: 123 ASFGRGRGSEVL 134 >gi|30264370|ref|NP_846747.1| GTP-binding protein Era [Bacillus anthracis str. Ames] gi|47529821|ref|YP_021170.1| GTP-binding protein Era [Bacillus anthracis str. 'Ames Ancestor'] gi|49187195|ref|YP_030447.1| GTP-binding protein Era [Bacillus anthracis str. Sterne] gi|65321672|ref|ZP_00394631.1| COG1159: GTPase [Bacillus anthracis str. A2012] gi|165872076|ref|ZP_02216716.1| GTP-binding protein Era [Bacillus anthracis str. A0488] gi|167634499|ref|ZP_02392819.1| GTP-binding protein Era [Bacillus anthracis str. A0442] gi|167638699|ref|ZP_02396975.1| GTP-binding protein Era [Bacillus anthracis str. A0193] gi|170687400|ref|ZP_02878617.1| GTP-binding protein Era [Bacillus anthracis str. A0465] gi|170707479|ref|ZP_02897933.1| GTP-binding protein Era [Bacillus anthracis str. A0389] gi|177653279|ref|ZP_02935531.1| GTP-binding protein Era [Bacillus anthracis str. A0174] gi|190566974|ref|ZP_03019890.1| GTP-binding protein Era [Bacillus anthracis Tsiankovskii-I] gi|227817076|ref|YP_002817085.1| GTP-binding protein Era [Bacillus anthracis str. CDC 684] gi|229602326|ref|YP_002868589.1| GTP-binding protein Era [Bacillus anthracis str. A0248] gi|254684057|ref|ZP_05147917.1| GTP-binding protein Era [Bacillus anthracis str. CNEVA-9066] gi|254736405|ref|ZP_05194111.1| GTP-binding protein Era [Bacillus anthracis str. Western North America USA6153] gi|254741443|ref|ZP_05199130.1| GTP-binding protein Era [Bacillus anthracis str. Kruger B] gi|254750881|ref|ZP_05202920.1| GTP-binding protein Era [Bacillus anthracis str. Vollum] gi|254757791|ref|ZP_05209818.1| GTP-binding protein Era [Bacillus anthracis str. Australia 94] gi|30259028|gb|AAP28233.1| GTP-binding protein Era [Bacillus anthracis str. Ames] gi|47504969|gb|AAT33645.1| GTP-binding protein Era [Bacillus anthracis str. 'Ames Ancestor'] gi|49181122|gb|AAT56498.1| GTP-binding protein Era [Bacillus anthracis str. Sterne] gi|164712207|gb|EDR17744.1| GTP-binding protein Era [Bacillus anthracis str. A0488] gi|167513547|gb|EDR88917.1| GTP-binding protein Era [Bacillus anthracis str. A0193] gi|167529951|gb|EDR92686.1| GTP-binding protein Era [Bacillus anthracis str. A0442] gi|170127723|gb|EDS96596.1| GTP-binding protein Era [Bacillus anthracis str. A0389] gi|170668595|gb|EDT19341.1| GTP-binding protein Era [Bacillus anthracis str. A0465] gi|172081561|gb|EDT66633.1| GTP-binding protein Era [Bacillus anthracis str. A0174] gi|190561965|gb|EDV15934.1| GTP-binding protein Era [Bacillus anthracis Tsiankovskii-I] gi|227004139|gb|ACP13882.1| GTP-binding protein Era [Bacillus anthracis str. CDC 684] gi|229266734|gb|ACQ48371.1| GTP-binding protein Era [Bacillus anthracis str. A0248] Length = 301 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 8/92 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL + K I +D P TT G+ E + I D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALE 248 H+ +GD +K + T ++L +V+A+E Sbjct: 71 HK---LGDFMVKMAQTTLKEVDIVLFMVNAVE 99 >gi|312134695|ref|YP_004002033.1| gtp-binding proten hflx [Caldicellulosiruptor owensensis OL] gi|311774746|gb|ADQ04233.1| GTP-binding proten HflX [Caldicellulosiruptor owensensis OL] Length = 509 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 9/133 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA- 220 + IIG NAGKST + +++A + D F TL V KEF+L D G I+N Sbjct: 353 VSIIGYTNAGKSTLMNRISKADVLVEDKLFATLDTTTRRVYHKGKEFLLTDTVGFIRNLP 412 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRK---KI 273 H L+ + ++++L++V + ++++ + + +L +L A N L + KI Sbjct: 413 HHLVEAFSSTLEEVKYSNLILNVVDISDPYYYDHIKVS-EDLLKQLGAENIPLIRVYNKI 471 Query: 274 EIVGLSQIDTVDS 286 + V LS +D D+ Sbjct: 472 DKVDLSSVDVFDN 484 >gi|299535811|ref|ZP_07049132.1| GTP-binding protein Era-like protein [Lysinibacillus fusiformis ZC1] gi|298729011|gb|EFI69565.1| GTP-binding protein Era-like protein [Lysinibacillus fusiformis ZC1] Length = 305 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 14/133 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I IIG PN GKSTFL V K I +D P TT G++ + I D PGI K Sbjct: 13 ISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTDDSQMIFIDTPGIHKPK 72 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD LK ++ T V++ +V+A E+ + + IL+ L+ + + + Sbjct: 73 HK---LGDFMLKVSKNTLREVDVIMFMVNA-EQKLGKGDEFILEMLAGNPTPV-----FL 123 Query: 277 GLSQIDTVDSDTL 289 +++ID + D L Sbjct: 124 VINKIDAIHPDEL 136 >gi|294496482|ref|YP_003542975.1| small GTP-binding protein [Methanohalophilus mahii DSM 5219] gi|292667481|gb|ADE37330.1| small GTP-binding protein [Methanohalophilus mahii DSM 5219] Length = 363 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 46/89 (51%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L +T A +I Y FTTL G+++ + D+PG+++ Sbjct: 62 ATVTLVGFPSVGKSTLLNRLTGANSEIGAYEFTTLDVIPGVMEHKGAAIQILDVPGLVRG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + +++ ++ + Sbjct: 122 AASGRGRGKEVIAVVRNSDLVVFMLDVFQ 150 >gi|47567864|ref|ZP_00238572.1| GTP-binding protein Era [Bacillus cereus G9241] gi|47555541|gb|EAL13884.1| GTP-binding protein Era [Bacillus cereus G9241] Length = 301 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 8/92 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL + K I +D P TT G+ E + I D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALE 248 H+ +GD +K + T ++L +V+A+E Sbjct: 71 HK---LGDFMVKMAQTTLKEVDIVLFMVNAVE 99 >gi|52840266|ref|YP_094065.1| GTP binding protein HflX [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627377|gb|AAU26118.1| GTP binding protein HflX [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 419 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 5/110 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + ++G NAGKST +T +AD F TL P + ++ G ILAD G I++ Sbjct: 205 VSLVGYTNAGKSTLFNVLTGEHTYVADQLFATLDPTMRKLELPGSSAAILADTVGFIRDL 264 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYN 266 H L+ T++ +LLH++ + N + Q +LDEL N Sbjct: 265 PHHLVEAFRATLEETQQADLLLHVIDISDPNWRETVFEVQKVLDELKVNN 314 >gi|322418933|ref|YP_004198156.1| ferrous iron transport protein B [Geobacter sp. M18] gi|320125320|gb|ADW12880.1| ferrous iron transport protein B [Geobacter sp. M18] Length = 663 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 38/221 (17%) Query: 131 KSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYP 190 K S ++AP N G + ++G PN GKS ++T A +++YP Sbjct: 7 KGSCHEAPTVTNTGA--------------KKVALVGNPNVGKSVLFNALTGAYVTVSNYP 52 Query: 191 FTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQGAGIGDRFLKHTERTHVLLHIVSA-- 246 T++ + G +EF + D PG+ I + + L TER H++LH++ A Sbjct: 53 GTSVEVSRGNAVINGEEFEVIDTPGMYSILPITEEERVAREIL-LTERPHLVLHVLDARN 111 Query: 247 LEENVQAAYQCILDELSAY--------NSELRKKIEIVGLSQ---IDTVDSDT-----LA 290 LE + Q I EL + + +I+I LSQ I + + T L Sbjct: 112 LERMLPMTLQLIEAELPVVLVVNIMDEAARMGLEIDIPLLSQRLGIPVIGAATAKKVGLP 171 Query: 291 RKKNELA--TQCGQVPFEFSSITGHGIPQILECLH-DKIFS 328 + +A T PF FS + I +I +CL D I S Sbjct: 172 EIRAAIAGSTSSAVPPFSFSRLMEGDIAEISDCLKGDYILS 212 >gi|75761897|ref|ZP_00741822.1| GTP-binding protein era [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218899466|ref|YP_002447877.1| GTP-binding protein Era [Bacillus cereus G9842] gi|74490605|gb|EAO53896.1| GTP-binding protein era [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218541393|gb|ACK93787.1| GTP-binding protein Era [Bacillus cereus G9842] Length = 301 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 8/92 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL + K I +D P TT G+ E + I D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALE 248 H+ +GD +K + T ++L +V+A+E Sbjct: 71 HK---LGDFMVKMAQTTLKEVDIVLFMVNAVE 99 >gi|94429026|gb|ABF18942.1| GTP-binding protein [uncultured bacterium pFosLip] Length = 249 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 16/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST ++T+A + D F TL P + ++ +E +LAD G + Sbjct: 11 VPTVALVGYTNAGKSTLFNALTQADVYVEDKLFATLDPTVRRLELPDGREIVLADTVGFV 70 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQ--CILDELSAYNSELRKKI 273 ++ H+ L+ ++LH++ A + Q Q +L EL A + Sbjct: 71 RDLPHELIAAFRSTLQEAREADLILHLIDASDGSRWQRVRQVNAVLKELDAD-----RVP 125 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQ-VPFEFSSITGHGIPQILECLHDKI 326 +I ++ID +D R+ + G+ S+ TG G+P +LE + +++ Sbjct: 126 QIRVYNKIDMLD-----RRPRVANNRHGEGRAVWLSAKTGEGVPFLLEAISERL 174 >gi|329114469|ref|ZP_08243231.1| GTP-binding protein Era-like protein [Acetobacter pomorum DM001] gi|326696545|gb|EGE48224.1| GTP-binding protein Era-like protein [Acetobacter pomorum DM001] Length = 300 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 23/170 (13%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 ++G PNAGKST L + AK I TT + LGI+ G+ + +L D PGI + Sbjct: 12 ALVGAPNAGKSTLLNRMAGAKLSIVSPKAQTTRFRVLGILMRGHSQILLVDTPGIFRPRR 71 Query: 222 QGAGIGDRFL-----KHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + DR + E + L +V A + A Q I++ L +E ++K+ +V Sbjct: 72 K----LDRAMVAAAWTGAEDADITLLLVDA-RSGLTEAVQTIIERL----AETKRKVWLV 122 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVP----FEFSSITGHGIPQILECL 322 L++ D V + L A+ ++P F S+ TG+G+ +L+ L Sbjct: 123 -LNKTDLVPATALLPLT---ASITEKLPVEHVFMVSARTGNGVEDLLDKL 168 >gi|301114981|ref|XP_002999260.1| GTPase, putative [Phytophthora infestans T30-4] gi|262111354|gb|EEY69406.1| GTPase, putative [Phytophthora infestans T30-4] Length = 407 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 12/133 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L+ +T + + FTTL G + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTMLSQLTETQSETNAVEFTTLTCIPGNLLYNDVRIQLLDLPGIIEGAA 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQI 281 G G G + + ++L ++ A E + + +EL E VGL ++ Sbjct: 125 HGRGRGREVIAVAKSADMILMVLDAGREAGNRHREILENEL-----------ETVGL-RL 172 Query: 282 DTVDSDTLARKKN 294 + + D RKKN Sbjct: 173 NRLPPDIYFRKKN 185 >gi|303288864|ref|XP_003063720.1| predicted protein [Micromonas pusilla CCMP1545] gi|226454788|gb|EEH52093.1| predicted protein [Micromonas pusilla CCMP1545] Length = 292 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 7/90 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PNAGKSTF+ ++ K I Y P TT + LG+V E + +L D PG+++ Sbjct: 6 VAIVGRPNAGKSTFMNALVGTKLSIVTYKPQTTRHRILGLVSEDDFQMVLLDTPGVMREE 65 Query: 221 HQGAGIGDRFLKHTE----RTHVLLHIVSA 246 + + LK VLL IV A Sbjct: 66 FN--KLDEMMLKSVRNAMANADVLLAIVDA 93 >gi|167855443|ref|ZP_02478208.1| GTP-binding protein hflX [Haemophilus parasuis 29755] gi|167853437|gb|EDS24686.1| GTP-binding protein hflX [Haemophilus parasuis 29755] Length = 452 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 7/112 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L ++ + ILAD G I Sbjct: 215 IPTISLVGYTNAGKSTLFNVITDAGVYAADQLFATLDPTLRRIQIQDVGTAILADTVGFI 274 Query: 218 K-NAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSA 264 + H L+ T +LLH++ + EN+ A Q +LDE+ A Sbjct: 275 RFLPHDLVSAFKSTLQETTEATLLLHVIDGADDRKNENIDAVNQ-VLDEIEA 325 >gi|42783426|ref|NP_980673.1| GTP-binding protein Era [Bacillus cereus ATCC 10987] gi|49481311|ref|YP_038355.1| GTP-binding protein Era [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141202|ref|YP_085626.1| GTP-binding protein Era [Bacillus cereus E33L] gi|118479469|ref|YP_896620.1| GTP-binding protein Era [Bacillus thuringiensis str. Al Hakam] gi|196034381|ref|ZP_03101790.1| GTP-binding protein Era [Bacillus cereus W] gi|196039186|ref|ZP_03106492.1| GTP-binding protein Era [Bacillus cereus NVH0597-99] gi|196046320|ref|ZP_03113546.1| GTP-binding protein Era [Bacillus cereus 03BB108] gi|206978417|ref|ZP_03239286.1| GTP-binding protein Era [Bacillus cereus H3081.97] gi|217961790|ref|YP_002340360.1| GTP-binding protein Era [Bacillus cereus AH187] gi|218905437|ref|YP_002453271.1| GTP-binding protein Era [Bacillus cereus AH820] gi|222097745|ref|YP_002531802.1| gtp-binding protein era [Bacillus cereus Q1] gi|225866281|ref|YP_002751659.1| GTP-binding protein Era [Bacillus cereus 03BB102] gi|254721891|ref|ZP_05183680.1| GTP-binding protein Era [Bacillus anthracis str. A1055] gi|301055792|ref|YP_003794003.1| GTP-binding protein [Bacillus anthracis CI] gi|42739355|gb|AAS43281.1| GTP-binding protein Era [Bacillus cereus ATCC 10987] gi|49332867|gb|AAT63513.1| GTP-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974671|gb|AAU16221.1| GTP-binding protein [Bacillus cereus E33L] gi|118418694|gb|ABK87113.1| GTP-binding protein [Bacillus thuringiensis str. Al Hakam] gi|195992923|gb|EDX56882.1| GTP-binding protein Era [Bacillus cereus W] gi|196022790|gb|EDX61471.1| GTP-binding protein Era [Bacillus cereus 03BB108] gi|196029813|gb|EDX68414.1| GTP-binding protein Era [Bacillus cereus NVH0597-99] gi|206743373|gb|EDZ54811.1| GTP-binding protein Era [Bacillus cereus H3081.97] gi|217063790|gb|ACJ78040.1| GTP-binding protein Era [Bacillus cereus AH187] gi|218535830|gb|ACK88228.1| GTP-binding protein Era [Bacillus cereus AH820] gi|221241803|gb|ACM14513.1| GTP-binding protein [Bacillus cereus Q1] gi|225786790|gb|ACO27007.1| GTP-binding protein Era [Bacillus cereus 03BB102] gi|300377961|gb|ADK06865.1| GTP-binding protein [Bacillus cereus biovar anthracis str. CI] gi|324328204|gb|ADY23464.1| GTPase Era [Bacillus thuringiensis serovar finitimus YBT-020] Length = 301 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 8/92 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL + K I +D P TT G+ E + I D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALE 248 H+ +GD +K + T ++L +V+A+E Sbjct: 71 HK---LGDFMVKMAQTTLKEVDIVLFMVNAVE 99 >gi|163846205|ref|YP_001634249.1| GTP-dependent nucleic acid-binding protein EngD [Chloroflexus aurantiacus J-10-fl] gi|222523955|ref|YP_002568425.1| GTP-dependent nucleic acid-binding protein EngD [Chloroflexus sp. Y-400-fl] gi|163667494|gb|ABY33860.1| GTP-binding protein YchF [Chloroflexus aurantiacus J-10-fl] gi|222447834|gb|ACM52100.1| GTP-binding protein YchF [Chloroflexus sp. Y-400-fl] Length = 360 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE-----------------G 204 I IIGLPN+GK+T ++TR + A Y L PNL VK Sbjct: 3 IAIIGLPNSGKTTVFNALTRGHAETAAYSSGQLEPNLATVKVPDPRLEVLAQMFKPRKIT 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y + DI G+ + G G+ L + LLH+V A ++ Sbjct: 63 YADVQYVDIGGLSGSGRAGGGLPPVLLNYIASADALLHVVRAFDD 107 >gi|319405766|emb|CBI79389.1| GTP-binding protein HflX [Bartonella sp. AR 15-3] Length = 444 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 I ++G NAGKST ++ + + F TL P L IV + +L+D G I N Sbjct: 221 IALVGYTNAGKSTLFNRLSNSNVLAKNMLFATLDPTLRKIVLPHGQTVLLSDTVGFISNL 280 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 H A L+ ++LH+ A + + A Q +++ LS+ ++ IV + Sbjct: 281 PTHLIAAFRAT-LEEVIEADLILHVRDASDPDHHAHAQDVVEILSSLGIDINNIDHIVEI 339 Query: 279 -SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 ++ID +D L + V S++TG G+ Q+L + KIF Sbjct: 340 WNKIDMLDQHALGVLQTNSKKMLNSV-LMMSALTGKGVDQLLALIEKKIF 388 >gi|194755172|ref|XP_001959866.1| GF13082 [Drosophila ananassae] gi|190621164|gb|EDV36688.1| GF13082 [Drosophila ananassae] Length = 652 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 86/184 (46%), Gaps = 15/184 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ + Sbjct: 171 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + +R + + L H+ + + + + QC + +++ + S K I Sbjct: 230 ----LEERNVIEMQAITALAHLRACVLYFMDISEQCGHSLEEQVKLFESIKPLFTNKPLI 285 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQ---VPFEF-SSITGHGIPQILECLHDKIFSIRG 331 + +++ID + D L ++ ++ T+ + +P S++ G+ ++ +++ S R Sbjct: 286 LAINKIDILTPDDLPEERRQIITKLQEDKNIPVMLMSTVQETGVMEVKTEACERLLSYRV 345 Query: 332 ENEF 335 + + Sbjct: 346 DQKM 349 >gi|160881644|ref|YP_001560612.1| ferrous iron transport protein B [Clostridium phytofermentans ISDg] gi|160430310|gb|ABX43873.1| ferrous iron transport protein B [Clostridium phytofermentans ISDg] Length = 697 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 15/144 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 +G +G PN GK+T + T AK K+A++P T+ G +K F L D+PGI + + Sbjct: 18 VGFVGNPNCGKTTLFNAYTGAKLKVANWPGVTVEKKEGAMKYHDHRFKLVDLPGIYSLTS 77 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + +F+ +E V++ + SALE N+ Q I EL K + I+ Sbjct: 78 YTMEEKLTRQFILDSE-VEVIIDVADASALERNLYLTLQLI---------ELGKPV-ILA 126 Query: 278 LSQIDTVDSDTLARKKNELATQCG 301 L+ +D V+ + + L G Sbjct: 127 LNMMDIVEERGMEIDMHRLPEMLG 150 >gi|258541745|ref|YP_003187178.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-01] gi|256632823|dbj|BAH98798.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-01] gi|256635880|dbj|BAI01849.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-03] gi|256638935|dbj|BAI04897.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-07] gi|256641989|dbj|BAI07944.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-22] gi|256645044|dbj|BAI10992.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-26] gi|256648099|dbj|BAI14040.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-32] gi|256651152|dbj|BAI17086.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654143|dbj|BAI20070.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-12] Length = 300 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 23/170 (13%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 ++G PNAGKST L + AK I TT + LGI+ G+ + +L D PGI + Sbjct: 12 ALVGAPNAGKSTLLNRMAGAKLSIVSPKAQTTRFRVLGILMRGHSQILLVDTPGIFRPRR 71 Query: 222 QGAGIGDRFL-----KHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + DR + E + L +V A + A Q I++ L +E ++K+ +V Sbjct: 72 K----LDRAMVAAAWTGAEDADITLLLVDA-RSGLTEAVQTIIERL----AETKRKVWLV 122 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVP----FEFSSITGHGIPQILECL 322 L++ D V + L A+ ++P F S+ TG+G+ +L+ L Sbjct: 123 -LNKTDLVPATALLPLT---ASITEKLPVEHVFMVSARTGNGVEDLLDKL 168 >gi|240948900|ref|ZP_04753256.1| GTP-binding protein HflX [Actinobacillus minor NM305] gi|240296715|gb|EER47326.1| GTP-binding protein HflX [Actinobacillus minor NM305] Length = 456 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 17/175 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T+A AD F TL P L ++ + ILAD G I Sbjct: 219 IPTVSLVGYTNAGKSTLFNAITQAGVYAADQLFATLDPTLRKMQIQDVGTTILADTVGFI 278 Query: 218 K-NAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 + H L+ T +LLH++ + EN+ A Q +LDE+ A Sbjct: 279 RFLPHDLVSAFKATLQETIEASLLLHVIDVSDDRKNENITAVNQ-VLDEIGALEIP---- 333 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILECLHDKI 326 I+ +++D ++ ++NE G+V + S+ TG GI + E + +++ Sbjct: 334 -SILVFNKVDRLEGIAPFIERNE----EGRVTAVYLSAHTGEGIDLLYEAIRERL 383 >gi|152976731|ref|YP_001376248.1| GTP-binding protein Era [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025483|gb|ABS23253.1| GTP-binding protein Era [Bacillus cytotoxicus NVH 391-98] Length = 301 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 19/155 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL + K I +D P TT G+ E + I D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKVQGVYTENDAQVIFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++L +V+A E + I+++L E R+ + +V Sbjct: 71 HK---LGDFMVKMAQTTLKEVDIVLFMVNA-AEGFGRGEEYIIEKL----KETRQPVFLV 122 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSIT 311 +++ID V + L EL Q + +EF+ I Sbjct: 123 -INKIDQVHPEKLL----ELIDQYRNL-YEFAEIV 151 >gi|33338590|gb|AAQ13917.1| HflX [Pasteurella multocida] Length = 448 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 19/181 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T+A AD F TL P L ++ + ILAD G I Sbjct: 219 IPTISLVGYTNAGKSTLFNLITQANVYAADQLFATLDPTLRRLQIQDVGTTILADTVGFI 278 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 ++ H L+ T +LLH++ + EN+ A + +L E++A + Sbjct: 279 RHLPHDLVSAFKSTLQETTEAALLLHVIDCADPRKLENIHAV-EAVLKEINAGD------ 331 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE----CLHDKIFS 328 I L + +D E + + S+ TG G+P +L+ CL ++I Sbjct: 332 --IPTLLVYNKIDQVAHIEPHIEYDQEQRPIAVYMSAQTGIGLPLLLDAISLCLKNEILD 389 Query: 329 I 329 + Sbjct: 390 L 390 >gi|119468153|ref|ZP_01611279.1| HflX, putative GTPase subunit of protease with nucleoside triP hydrolase domain [Alteromonadales bacterium TW-7] gi|119448146|gb|EAW29410.1| HflX, putative GTPase subunit of protease with nucleoside triP hydrolase domain [Alteromonadales bacterium TW-7] Length = 427 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 7/112 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKST +T ++ AD F TL P L ++ G + ILAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNRITDSEVYAADQLFATLDPTLRKLELGDVGQVILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSA 264 ++ H L T + LH++ A ++EN++ Q +L E+ A Sbjct: 257 RHLPHDLVAAFKATLTETREADLQLHVIDAADSRIKENIEQV-QSVLKEIEA 307 >gi|169829166|ref|YP_001699324.1| GTP-binding protein Era-like protein (Bex protein) [Lysinibacillus sphaericus C3-41] gi|254783660|sp|B1HTJ0|ERA_LYSSC RecName: Full=GTPase Era gi|168993654|gb|ACA41194.1| GTP-binding protein era-like protein (Bex protein) [Lysinibacillus sphaericus C3-41] Length = 305 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 14/133 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I IIG PN GKSTFL V K I +D P TT G++ + I D PGI K Sbjct: 13 ISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTTDSQMIFIDTPGIHKPK 72 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD LK + T V++ +V+A E+ + + IL+ L+ ++ + + Sbjct: 73 HK---LGDFMLKVAKNTLREVDVIMFMVNA-EQKLGKGDEFILEMLAGNSTPV-----FL 123 Query: 277 GLSQIDTVDSDTL 289 +++ID + D L Sbjct: 124 VINKIDQIHPDEL 136 >gi|291241451|ref|XP_002740609.1| PREDICTED: GTP binding protein 4-like [Saccoglossus kowalevskii] Length = 631 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 14/176 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ ++ Sbjct: 173 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLFVGHTDYKYLRWQVVDTPGILDHS--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC------ILDELSAYNSELRKKIEIVG 277 + +R + L H+ +A+ + + QC +D K ++ Sbjct: 230 --LEERNTIEMQAITALAHLRAAVLYIMDTSEQCGHTIEEQVDLFKNIQPLFANKPLLII 287 Query: 278 LSQIDTVDSDTLARKKNELAT--QCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 L++ID V + L + +L + Q +P S++T G+ + D++ + R Sbjct: 288 LNKIDVVKPEELGDDEKKLLSDFQTEGIPVLPMSTVTEEGVIDVKTEACDRLLAQR 343 >gi|301061734|ref|ZP_07202475.1| ferrous iron transport protein B [delta proteobacterium NaphS2] gi|300444194|gb|EFK08218.1| ferrous iron transport protein B [delta proteobacterium NaphS2] Length = 789 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 13/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PNAGK+T ++T A+ IA+YP T+ G+V E + D+PG A Sbjct: 7 IALSGNPNAGKTTVFNAITGARQHIANYPGVTVEKKYGVVHHRGWEIEVVDLPGTYSLTA 66 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + I R E+ +++ IV A L+ ++ A Q EL + I+ L Sbjct: 67 YSMEEIVARDFVINEKPRLVVDIVDASNLDRHLYLAVQF---------KELGVPL-ILAL 116 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D +S + + L+ Q G + +G GI +L+ Sbjct: 117 NMVDVAESRGINVDHDALSAQFGVPVVPMVARSGKGITALLD 158 >gi|226306253|ref|YP_002766213.1| GTP-binding protein HflX [Rhodococcus erythropolis PR4] gi|229490877|ref|ZP_04384712.1| GTP-binding protein HflX [Rhodococcus erythropolis SK121] gi|226185370|dbj|BAH33474.1| putative GTP-binding protein HflX [Rhodococcus erythropolis PR4] gi|229322267|gb|EEN88053.1| GTP-binding protein HflX [Rhodococcus erythropolis SK121] Length = 491 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 25/188 (13%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 I I I+G NAGKS+ L S+T + + + F TL P + +G +E++L D G Sbjct: 266 IPSIAIVGYTNAGKSSLLNSLTGSGVLVENALFATLDPTTRRAALDDG-REYVLTDTVGF 324 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSEL 269 ++ H + + F L+ +LLH+V + E ++A + + D L +S Sbjct: 325 VR--HLPTQLVEAFRSTLEEVTDADLLLHVVDGSDPLPTEQIKAVREVVTDVLRETDS-- 380 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIF 327 + E++ +++ID D TL + + G +P S+ TG GI ++ L + + Sbjct: 381 KAPPELIVVNKIDAADPVTLTQLR-------GLLPGAVFVSARTGEGIAELRAHLSEVL- 432 Query: 328 SIRGENEF 335 +R E E Sbjct: 433 -VRPEVEV 439 >gi|325972925|ref|YP_004249989.1| YchF subfamily translation-associated GTPase [Mycoplasma suis str. Illinois] gi|323651527|gb|ADX97609.1| YchF subfamily translation-associated GTPase [Mycoplasma suis str. Illinois] Length = 486 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 33/133 (24%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVK------------------ 202 +G++GLPN GKS+ ++ +AK +A +P++T+YP +V+ Sbjct: 5 VGLVGLPNVGKSSIFNLLSQKAKSTVASFPYSTIYPIHSLVEIKNERLDELEELFLFLFR 64 Query: 203 ---------EGYKEFILADIPGII----KNAHQGAGIGDRFLKHTERTHVLLHIVSAL-E 248 + Y+ F D+ GI+ + + + +G FL H V++ +V + Sbjct: 65 ESLNKERLSKKYESFEFLDLAGIVPLDGELDQKKSDMGAAFLSHIRAVDVIVLVVRTFTD 124 Query: 249 ENVQAAYQCILDE 261 E+V++ +DE Sbjct: 125 ESVESQLNVFVDE 137 >gi|312079042|ref|XP_003142003.1| hypothetical protein LOAG_06419 [Loa loa] gi|307762835|gb|EFO22069.1| hypothetical protein LOAG_06419 [Loa loa] Length = 367 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 2/121 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L+S+T + A Y FTTL G+++ L D+PGII+ Sbjct: 64 ARVAMVGFPSVGKSTLLSSLTTTESVAASYEFTTLTCIPGVIEYEGANIQLLDLPGIIEG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A QG G G + + ++L ++ A + +Q + EL + L KK ++ L Sbjct: 124 AAQGKGRGRQVIAVARTADIILMMLDAAKGEMQK--NLLSKELESVGIRLNKKPPLIYLK 181 Query: 280 Q 280 Q Sbjct: 182 Q 182 >gi|307267613|ref|ZP_07549083.1| GTP-binding proten HflX [Thermoanaerobacter wiegelii Rt8.B1] gi|306917370|gb|EFN47674.1| GTP-binding proten HflX [Thermoanaerobacter wiegelii Rt8.B1] Length = 413 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 7/112 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I I+G NAGKST L ++T A+ + D F TL P +V +E IL D G I+ Sbjct: 201 IAIVGYTNAGKSTLLNALTNAEVYVEDKLFATLDPTARRLVLSSGREVILIDTVGFIRKL 260 Query: 221 -HQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNS 267 H L+ + +LLH++ +EE ++ + +L +L A N+ Sbjct: 261 PHDLVEAFKSTLEEVKYADLLLHVIDVASPDMEEKIKVV-EKVLSDLGAINT 311 >gi|206971303|ref|ZP_03232254.1| GTP-binding protein Era [Bacillus cereus AH1134] gi|206734075|gb|EDZ51246.1| GTP-binding protein Era [Bacillus cereus AH1134] Length = 301 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 8/92 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL + K I +D P TT G+ E + I D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDAQVIFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALE 248 H+ +GD +K + T ++L +V+A+E Sbjct: 71 HK---LGDFMVKMAQTTLKEVDIVLFMVNAVE 99 >gi|167625539|ref|YP_001675833.1| GTP1/OBG protein [Shewanella halifaxensis HAW-EB4] gi|167355561|gb|ABZ78174.1| GTP1/OBG protein [Shewanella halifaxensis HAW-EB4] Length = 431 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 4/110 (3%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 ++ + ++G NAGKST +T + AD F TL P L + ILAD G I+ Sbjct: 197 MSTVSLVGYTNAGKSTLFNGLTTSDVYAADQLFATLDPTLRKLDLPDGAVILADTVGFIR 256 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY---QCILDELSA 264 + H L+ T + +LLH+V + +E + + Q +L E+ A Sbjct: 257 HLPHDLVAAFKATLQETRQADLLLHVVDSADEKMGDNFKQVQNVLKEIDA 306 >gi|119944927|ref|YP_942607.1| GTP-binding protein EngA [Psychromonas ingrahamii 37] gi|166225845|sp|A1SU43|DER_PSYIN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|119863531|gb|ABM03008.1| small GTP-binding protein [Psychromonas ingrahamii 37] Length = 489 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 12/177 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G K EFI+ D GI + Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKIDEHEFIVIDTGGITGDE 64 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A + + L + +L +V A + A + I D L + KK+ +V + Sbjct: 65 EGIDALMAGQSLLAIDEADAVLFLVDA-RAGMTIADEAIADHLRKQD----KKVFVVA-N 118 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF-SIRGENEF 335 + D VD+D++ + L G+V + ++ G G+ Q++E D F + E++F Sbjct: 119 KTDGVDADSVCAEFYALG--LGEV-YHIAAAQGKGVRQMIEIALDGFFDDVEQEDDF 172 >gi|145299527|ref|YP_001142368.1| GTP-binding protein EngA [Aeromonas salmonicida subsp. salmonicida A449] gi|166224302|sp|A4SNZ8|DER_AERS4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|142852299|gb|ABO90620.1| GTP-binding protein EngA [Aeromonas salmonicida subsp. salmonicida A449] Length = 499 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 13/163 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G K G EFI+ D G I Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGELEFIVVDTGG-IDGT 63 Query: 221 HQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A + AA Q I +A+ + KK+ +V Sbjct: 64 EEGIELKMAEQSLLAIEEADVVLFMVDA-RAGLTAADQAI----AAHLRKTHKKVFLVA- 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 ++ D +D D+ + LA G V ++ ++ G G+ +LE Sbjct: 118 NKTDGIDGDSAVSEFYCLA--LGDV-YQIAAAHGRGVLSLLEL 157 >gi|242080655|ref|XP_002445096.1| hypothetical protein SORBIDRAFT_07g004020 [Sorghum bicolor] gi|241941446|gb|EES14591.1| hypothetical protein SORBIDRAFT_07g004020 [Sorghum bicolor] Length = 457 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 35/59 (59%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I + ++G PN GKS+ + ++ KP++ YPFTT +G + ++ F + D PG++ Sbjct: 259 IPTLCLVGSPNVGKSSLVRILSSGKPEVCSYPFTTRGILMGHIVSNHERFQVTDTPGLL 317 >gi|30022378|ref|NP_834009.1| GTP-binding protein Era [Bacillus cereus ATCC 14579] gi|218232187|ref|YP_002369107.1| GTP-binding protein Era [Bacillus cereus B4264] gi|29897936|gb|AAP11210.1| GTP-binding protein [Bacillus cereus ATCC 14579] gi|218160144|gb|ACK60136.1| GTP-binding protein Era [Bacillus cereus B4264] gi|326942082|gb|AEA17978.1| GTP-binding protein Era [Bacillus thuringiensis serovar chinensis CT-43] Length = 301 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 8/92 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL + K I +D P TT G+ E + I D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDAQVIFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALE 248 H+ +GD +K + T ++L +V+A+E Sbjct: 71 HK---LGDFMVKMAQTTLKEVDIVLFMVNAVE 99 >gi|296504794|ref|YP_003666494.1| GTP-binding protein Era [Bacillus thuringiensis BMB171] gi|296325846|gb|ADH08774.1| GTP-binding protein Era [Bacillus thuringiensis BMB171] Length = 301 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 8/92 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL + K I +D P TT G+ E + I D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDAQVIFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALE 248 H+ +GD +K + T ++L +V+A+E Sbjct: 71 HK---LGDFMVKMAQTTLKEVDIVLFMVNAVE 99 >gi|169781814|ref|XP_001825370.1| GTP-dependent nucleic acid-binding protein engD [Aspergillus oryzae RIB40] gi|238498632|ref|XP_002380551.1| GTP-binding protein YchF [Aspergillus flavus NRRL3357] gi|83774112|dbj|BAE64237.1| unnamed protein product [Aspergillus oryzae] gi|220693825|gb|EED50170.1| GTP-binding protein YchF [Aspergillus flavus NRRL3357] Length = 394 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST ++T++ A++P+ T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITKSNLGNPANFPYATIDPEEARVIVPDDRFDWLCEHYKPKSQV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+ + A GAG+G+ FL H + +V ++ Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDD 128 >gi|119897224|ref|YP_932437.1| GTP-binding subunit of protease specific for phage lambda [Azoarcus sp. BH72] gi|119669637|emb|CAL93550.1| probable GTP-binding subunit of protease specific for phage lambda [Azoarcus sp. BH72] Length = 379 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 15/166 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + ++G NAGKST ++T+A AD F TL + G +L+D G I++ Sbjct: 200 VSLVGYTNAGKSTLFNALTKAGAYAADQLFATLDTTSRRLFVGGGNVVLSDTVGFIRDLP 259 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKIEIVG 277 H + L+ T VLLH+V A E+ A A +L+E+ A +I+ Sbjct: 260 HALVAAFEATLEETAHADVLLHVVDAASEDRDAQIEAVNRVLEEIGAAEVP-----QILV 314 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILECL 322 ++ID + + + C ++ F S+ TG G+ + E L Sbjct: 315 WNKIDLTHAAPAVERGD-----CDRIRRVFLSARTGEGLELLREAL 355 >gi|148656458|ref|YP_001276663.1| small GTP-binding protein [Roseiflexus sp. RS-1] gi|148568568|gb|ABQ90713.1| small GTP-binding protein [Roseiflexus sp. RS-1] Length = 454 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 9/134 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I I+G NAGKST L +++ A + D F TL P + G ++ +L D G I Sbjct: 224 IPVIAIVGYTNAGKSTLLNALSGANVRAEDRLFATLDPTTRQVTLPGGQQALLTDTVGFI 283 Query: 218 -KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 K Q L+ VLLH++ N Q +LD L + E R I ++ Sbjct: 284 QKLPTQLVAAFRATLEEIREADVLLHVLDITHPNAAQQTQTVLDTLRDLHVEDRPIITVL 343 Query: 277 -------GLSQIDT 283 G+++++T Sbjct: 344 NKVDLMAGMNEVET 357 >gi|325973217|ref|YP_004250281.1| GTPase ObgE [Mycoplasma suis str. Illinois] gi|323651819|gb|ADX97901.1| GTPase ObgE [Mycoplasma suis str. Illinois] Length = 390 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 3/165 (1%) Query: 7 AKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDF-RYQQHF 65 K+ +++G GG G IS+ R ++ GP+GG+GG GG +++ +N RY + Sbjct: 5 VKIKLQAGRGGDGIISWARNRYNSRMGPNGGNGGNGGSIYLVVNKKINDFSSINRY--LW 62 Query: 66 KAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGF 125 KA++G G + ++ G KG D+ + +P T+V++ + + ++ GG GG Sbjct: 63 KAENGFPGQRDSKFGLKGRDISIDIPENTEVYDFGEKIKRTTVTSDSPTYLVCRGGRGGR 122 Query: 126 GNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNA 170 GN FKS+ Q+P G G++K I L L IGII L ++ Sbjct: 123 GNKSFKSARYQSPQLYELGEKGEQKEILLILSKFKRIGIINLLDS 167 >gi|296201158|ref|XP_002747918.1| PREDICTED: developmentally-regulated GTP-binding protein 2-like, partial [Callithrix jacchus] Length = 353 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 15/113 (13%) Query: 168 PNAGK--STFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAG 225 P A K STFL+ +T + A Y FTTL G+++ L D+PGII+ A QG G Sbjct: 58 PEASKEQSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEGAAQGKG 117 Query: 226 IGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 G + + V++ ++ A + VQ S L K++E VG+ Sbjct: 118 RGRQVIAVARTADVVIMMLDATKGEVQ-------------RSLLEKELESVGI 157 >gi|296109955|ref|YP_003616904.1| small GTP-binding protein [Methanocaldococcus infernus ME] gi|295434769|gb|ADG13940.1| small GTP-binding protein [Methanocaldococcus infernus ME] Length = 382 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 40/85 (47%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G P+ GKST L +T A ++ Y FTTL G+++ + L D PGII Sbjct: 75 ATAAFVGFPSVGKSTLLNKLTNANSEVGAYAFTTLTIVPGVLEYKGAKIQLLDAPGIIVG 134 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G L ++L V Sbjct: 135 ASSGKGRGTEVLSAVRSADLILLTV 159 >gi|87122764|ref|ZP_01078637.1| hypothetical protein MED121_24099 [Marinomonas sp. MED121] gi|86161929|gb|EAQ63221.1| hypothetical protein MED121_24099 [Marinomonas sp. MED121] Length = 57 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 19/29 (65%), Positives = 24/29 (82%) Query: 1 MKFLDEAKVYIRSGDGGAGGISFRREKFI 29 MKF+DEA +Y+R+G GG G +SF REKFI Sbjct: 1 MKFVDEASIYVRAGKGGNGCLSFWREKFI 29 >gi|189189058|ref|XP_001930868.1| GTP-dependent nucleic acid-binding protein engD [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972474|gb|EDU39973.1| GTP-dependent nucleic acid-binding protein engD [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 393 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYP----------NLGIVKEGYK----- 206 GI+GL N GKST ++T+ A++P+ T+ P + E YK Sbjct: 24 GIVGLANVGKSTLFQAITKCSLGNPANFPYATIDPEESRVLVPDERFDWLVEHYKPKSVV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ I D Sbjct: 84 PAHLTIYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPIRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L ELR K IE V Sbjct: 144 -LDIIAEELRLKDIEFV 159 >gi|71024069|ref|XP_762264.1| hypothetical protein UM06117.1 [Ustilago maydis 521] gi|46101766|gb|EAK86999.1| hypothetical protein UM06117.1 [Ustilago maydis 521] Length = 465 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 70/167 (41%), Gaps = 32/167 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------------KEG 204 +GI+GLPN GKS+ + + K A++P+ T+ P V K Sbjct: 94 MGIVGLPNVGKSSLFNVIAKCDLGKSANFPYATIEPEEARVPVPDDRFTWLANHYKPKSE 153 Query: 205 YKEFILA-DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCIL 259 F+ DI G+ A GAG+G+ FL + + +V A ++ +V+ I Sbjct: 154 VPAFLTCIDIAGLTAGASTGAGLGNAFLSNVRSVDGIFQVVRAFDDAEVIHVEGDVNPIR 213 Query: 260 DELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE 306 D + ++ELR L ID ++ KKN A G V E Sbjct: 214 D-MEIISTELR-------LKDIDWIEKALDNSKKN--ARSAGNVSLE 250 >gi|17228407|ref|NP_484955.1| GTP-binding protein Era [Nostoc sp. PCC 7120] gi|17130258|dbj|BAB72869.1| GTP-binding protein [Nostoc sp. PCC 7120] Length = 337 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/174 (29%), Positives = 75/174 (43%), Gaps = 28/174 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 IGIIG PN GKST + + K I T L GIV + I D PGI K Sbjct: 48 IGIIGRPNVGKSTLMNQLVGQKIAITSPVAQTTRNRLRGIVTTPEAQLIFVDTPGIHKPH 107 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQC------ILDELSAYNSELR 270 HQ +G+ +K+ E V+L +V A C I D L + + Sbjct: 108 HQ---LGEVLVKNAKLAIESVDVVLFVVD-------GAVACGAGDRFIADLLIHSKTPV- 156 Query: 271 KKIEIVGLSQID--TVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 I+G++++D DS + +LA+ +FS+ TG +PQ+ E L Sbjct: 157 ----ILGINKVDQQPPDSQKIDESYQQLASAYQWPTVKFSAKTGAELPQLQELL 206 >gi|269469210|gb|EEZ80744.1| GTPase [uncultured SUP05 cluster bacterium] Length = 438 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 5/108 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 I + G NAGKST ++T+A+ D F TL + ++ E ++AD G I++ Sbjct: 207 IALAGYTNAGKSTLFNALTKAEVFADDRLFATLDSTIRRVILPASGEAVIADTVGFIQDL 266 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEE-NVQAAYQC--ILDELSA 264 H+ L+ T R +VLLH+V A +E N++ Q I++E+ A Sbjct: 267 PHELVAAFKSTLEETRRANVLLHVVDASDEYNLEKIDQVEDIINEIDA 314 >gi|146295993|ref|YP_001179764.1| small GTP-binding protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409569|gb|ABP66573.1| small GTP-binding protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 519 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 9/133 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA- 220 + IIG NAGKST + +++A + D F TL V KEF+L D G I+N Sbjct: 363 VSIIGYTNAGKSTLMNRISKADVLVEDKLFATLDTTTRRVYHKGKEFLLTDTVGFIRNLP 422 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRK---KI 273 H L+ + ++++L++V + ++++ + + +L L A N L + KI Sbjct: 423 HHLVEAFSSTLEEVKYSNLILNVVDISDPYYYDHIKVS-ENLLKHLGAENIPLIRVYNKI 481 Query: 274 EIVGLSQIDTVDS 286 + V LS +D D+ Sbjct: 482 DKVDLSTVDVFDN 494 >gi|302341981|ref|YP_003806510.1| ferrous iron transport protein B [Desulfarculus baarsii DSM 2075] gi|301638594|gb|ADK83916.1| ferrous iron transport protein B [Desulfarculus baarsii DSM 2075] Length = 823 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 22/141 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNA 220 + G PN+GKST +T A+ +A+YP T+ +G EG ++ L D+PG I + Sbjct: 8 ALAGQPNSGKSTIFNMLTGARQFVANYPGVTVEKKVGYFSEGGRKIELVDLPGTYSITSY 67 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + F+ H + T V +++V A L N+ +Q + E+ + + ++ L Sbjct: 68 SMEERVTRDFILHDQPTLV-VNVVDAANLRRNLYLTFQLL---------EMERPL-LLDL 116 Query: 279 SQIDT-------VDSDTLARK 292 + ID +D D LAR+ Sbjct: 117 NMIDVARKHGQEIDQDELARR 137 >gi|164429660|ref|XP_964666.2| hypothetical protein NCU02044 [Neurospora crassa OR74A] gi|38566909|emb|CAE76213.1| probable GTP-binding protein [Neurospora crassa] gi|157073567|gb|EAA35430.2| hypothetical protein NCU02044 [Neurospora crassa OR74A] Length = 395 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST ++T+ A++P+ T+ P V E Y+ Sbjct: 24 GIVGLANVGKSTLFQAITKCNLGNPANFPYATIDPEEARVIVPDERFDWLCEKYQPKSRV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+ + A GAG+G+ FL H + +V A ++ Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRAFDD 128 >gi|115474885|ref|NP_001061039.1| Os08g0158900 [Oryza sativa Japonica Group] gi|37806152|dbj|BAC99657.1| Nucleolar GTP-binding protein 1-like [Oryza sativa Japonica Group] gi|113623008|dbj|BAF22953.1| Os08g0158900 [Oryza sativa Japonica Group] gi|222639949|gb|EEE68081.1| hypothetical protein OsJ_26117 [Oryza sativa Japonica Group] Length = 463 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 35/59 (59%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I + ++G PN GKS+ + ++ KP++ YPFTT +G + ++ F + D PG++ Sbjct: 262 IPTLCLVGSPNVGKSSLVRILSSGKPEVCSYPFTTRGILMGHIVSNHERFQVTDTPGLL 320 >gi|71001604|ref|XP_755483.1| nucleolar GTP-binding protein (Nog1) [Aspergillus fumigatus Af293] gi|66853121|gb|EAL93445.1| nucleolar GTP-binding protein (Nog1), putative [Aspergillus fumigatus Af293] Length = 650 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL S+TRA + Y FTT +G Y F D PGI+ + + Sbjct: 167 ICGYPNVGKSSFLRSITRADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 226 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC + D++ ++S KI + Sbjct: 227 MNTIE-----MQSITAIAHLRSAILYFMDLSEQCGYSVADQIKLFHSIRPLFANKIVFLV 281 Query: 278 LSQIDTVDSDTLARKKNE---LATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + L + E + G V + S T G+ + DK+ + R Sbjct: 282 VNKIDVRRPEDLEPEYQEEIQKILKSGDVEMLQLSCATAEGVTAVKNAACDKLLAER 338 >gi|323143742|ref|ZP_08078410.1| GTP-binding protein HflX [Succinatimonas hippei YIT 12066] gi|322416455|gb|EFY07121.1| GTP-binding protein HflX [Succinatimonas hippei YIT 12066] Length = 454 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 19/175 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + +G NAGKST +T++ AD F TL P L V + + + AD G I++ Sbjct: 202 VSFVGYTNAGKSTLFNRLTKSAVYEADQLFATLDPTLRTVSLDVVGKAVFADTVGFIRHL 261 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H L+ T + +LLHI+ A ++ V+ + + A N+ L++ +G Sbjct: 262 PHDLIAAFKSTLEETVKADLLLHIIDAADKRVE-------ENIKAVNAVLKQ----IGAD 310 Query: 280 QIDTV----DSDTLARKKNELAT-QCGQ-VPFEFSSITGHGIPQILECLHDKIFS 328 ++ T+ +D L +++ + G+ V S+ TG G+ +L C+ + + S Sbjct: 311 EVPTLLVFNKADLLDTPYDKVVRDETGKPVRVNVSAKTGSGLSDLLSCVSELLSS 365 >gi|311069130|ref|YP_003974053.1| GTP-binding protein Era [Bacillus atrophaeus 1942] gi|310869647|gb|ADP33122.1| GTP-binding protein Era [Bacillus atrophaeus 1942] Length = 301 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 21/167 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D P TT G++ G + I D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++L +++A EE + I+++L ++ + + Sbjct: 71 HK---LGDFMMKVAQNTLKEVDLILFMINA-EEGYGKGDEFIIEKLQHTSTPV-----FL 121 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQIL 319 +++ID + D L +E + PF+ S++ G+ I +L Sbjct: 122 IVNKIDQIHPDKLLLLIDEYRVRY---PFKEIVPISALEGNNIETLL 165 >gi|146299638|ref|YP_001194229.1| GTP-binding protein Era [Flavobacterium johnsoniae UW101] gi|146154056|gb|ABQ04910.1| GTP-binding protein Era [Flavobacterium johnsoniae UW101] Length = 295 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 16/167 (9%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + A V I TT + LGIV + +L+D PGIIK A Sbjct: 10 VNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQIVLSDTPGIIKPA 69 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 ++ F+K E +L+++V E+N++ DE + KI ++ L Sbjct: 70 YEMQESMMNFVKSAFEDADILVYMVEIGEQNLK-------DE-DFFKKIFYAKIPVLLL- 120 Query: 280 QIDTVDSDTLARKKNELATQCGQVP----FEFSSITGHGIPQILECL 322 ++ +D+ + + ++A +VP F S++ +P++ E + Sbjct: 121 -LNKIDNSNQEQLEEQVAFWKEKVPNAEIFPISALQNFNVPEVFERI 166 >gi|330932132|ref|XP_003303661.1| hypothetical protein PTT_15972 [Pyrenophora teres f. teres 0-1] gi|311320190|gb|EFQ88244.1| hypothetical protein PTT_15972 [Pyrenophora teres f. teres 0-1] Length = 393 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYP----------NLGIVKEGYK----- 206 GI+GL N GKST ++T+ A++P+ T+ P + E YK Sbjct: 24 GIVGLANVGKSTLFQAITKCSLGNPANFPYATIDPEESRVLVPDERFDWLVEHYKPKSVV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A GAG+G+ FL H + +V ++ +V+ I D Sbjct: 84 PAHLTIYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPIRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L ELR K IE V Sbjct: 144 -LDIIAEELRLKDIEFV 159 >gi|224013052|ref|XP_002295178.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220969140|gb|EED87482.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 377 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 48/85 (56%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 IG++G P+ GKST L ++T + + A Y FTTL G +K + D+PGII+ A Sbjct: 71 IGLVGFPSVGKSTLLTTLTGTRSEAAAYEFTTLTCIPGTMKYKGARIQVLDLPGIIEGAA 130 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSA 246 +G G G + + +++L ++ A Sbjct: 131 EGKGRGRQVISTARTCNLILIVLDA 155 >gi|149183349|ref|ZP_01861787.1| Era [Bacillus sp. SG-1] gi|148848946|gb|EDL63158.1| Era [Bacillus sp. SG-1] Length = 297 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 19/166 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I IIG PN GKSTFL V K I +D P TT G+ + I D PGI K Sbjct: 7 ISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVYTTNESQMIFIDTPGIHKPK 66 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++L +++A EE + I+++L + + + Sbjct: 67 HK---LGDFMMKIAQNTLREVDIILFMINA-EEGYGRGDEFIIEKLKGVKTPV-----FL 117 Query: 277 GLSQIDTVDSDT---LARKKNELATQCGQVPFEFSSITGHGIPQIL 319 L++ID + D L + N L VP S++ G+ + ++ Sbjct: 118 VLNKIDQLHPDKILPLIEQYNALHDFAAVVP--ISALEGNNVETLI 161 >gi|325916037|ref|ZP_08178327.1| GTP-binding proten HflX [Xanthomonas vesicatoria ATCC 35937] gi|325537713|gb|EGD09419.1| GTP-binding proten HflX [Xanthomonas vesicatoria ATCC 35937] Length = 439 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 1/86 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 I ++G NAGKST ++T A+ +AD F TL P + + ILAD G +++ Sbjct: 201 IALVGYTNAGKSTLFNALTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLP 260 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L +LLHIV A Sbjct: 261 HQLVAAFRSTLSEARDADLLLHIVDA 286 >gi|261402327|ref|YP_003246551.1| small GTP-binding protein [Methanocaldococcus vulcanius M7] gi|261369320|gb|ACX72069.1| small GTP-binding protein [Methanocaldococcus vulcanius M7] Length = 366 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 39/85 (45%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G P+ GKST L +T A ++ Y FTTL G++ + L D PGII Sbjct: 60 ATAAFVGFPSVGKSTLLNKLTNANSEVGAYAFTTLTIVPGVLNYKGAKIQLLDAPGIIVG 119 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A G G G L ++L V Sbjct: 120 ASSGKGRGTEVLSAVRSADLILLTV 144 >gi|163851698|ref|YP_001639741.1| GTP-binding protein Era [Methylobacterium extorquens PA1] gi|163663303|gb|ABY30670.1| GTP-binding protein Era [Methylobacterium extorquens PA1] Length = 326 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 31/179 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG+PNAGKST L ++ AK I TT GIV EG + +L D PGI Sbjct: 36 VALIGVPNAGKSTLLNALVGAKVSIVSRKVQTTRALVRGIVMEGNAQIVLVDTPGIFAPK 95 Query: 221 HQGAGIGDRFLKHT--------ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 + DR + H+ + +L+ +E V + IL L K+ Sbjct: 96 RR----LDRAMVHSAWSGAADADAVCLLIDARKGADEEV----ETILRRLPEV-----KR 142 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQC-GQVPFE----FSSITGHGIPQILECLHDKI 326 +I+ L++ID + + L EL + VPFE S++ G GI + + L ++ Sbjct: 143 PKILILNKIDLIARERLL----ELVAKLNAMVPFEDTFLISALKGDGIADLRKALAARM 197 >gi|21263583|sp|Q8YYD8|ERA_NOSS1 RecName: Full=GTPase Era Length = 324 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 52/174 (29%), Positives = 75/174 (43%), Gaps = 28/174 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 IGIIG PN GKST + + K I T L GIV + I D PGI K Sbjct: 35 IGIIGRPNVGKSTLMNQLVGQKIAITSPVAQTTRNRLRGIVTTPEAQLIFVDTPGIHKPH 94 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQC------ILDELSAYNSELR 270 HQ +G+ +K+ E V+L +V A C I D L + + Sbjct: 95 HQ---LGEVLVKNAKLAIESVDVVLFVVD-------GAVACGAGDRFIADLLIHSKTPV- 143 Query: 271 KKIEIVGLSQID--TVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 I+G++++D DS + +LA+ +FS+ TG +PQ+ E L Sbjct: 144 ----ILGINKVDQQPPDSQKIDESYQQLASAYQWPTVKFSAKTGAELPQLQELL 193 >gi|323141020|ref|ZP_08075926.1| GTP-binding protein HflX [Phascolarctobacterium sp. YIT 12067] gi|322414468|gb|EFY05281.1| GTP-binding protein HflX [Phascolarctobacterium sp. YIT 12067] Length = 610 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 12/136 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST L ++T + D F TL P + ++ IL D G I Sbjct: 385 VPTVSLVGYTNAGKSTLLNTLTNSDIYAQDQLFATLDPTTRQLDLPNKQQAILTDTVGFI 444 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 + HQ L+ ++ VLLH++ +E A YQ +LDEL A + K Sbjct: 445 QRLPHQLVAAFQSTLEEVVQSDVLLHVIDVSHELYKEQAAAVYQ-VLDELGA-----KDK 498 Query: 273 IEIVGLSQIDTVDSDT 288 I ++ID + D+ Sbjct: 499 TIITVYNKIDKLPPDS 514 >gi|45359006|ref|NP_988563.1| ATP/GTP-binding motif-containing protein [Methanococcus maripaludis S2] gi|45047881|emb|CAF30999.1| GTP1/OBG family:ATP/GTP-binding site motif A (P-loop):TGS domain:Small GTP-binding protein domain [Methanococcus maripaludis S2] Length = 374 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 37/72 (51%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +G P+ GKST L +T A ++ Y FTTL G+++ + + D PGII Sbjct: 68 ATVAFVGFPSVGKSTLLNKLTNANSEVGAYAFTTLTIIPGLMEHKGAKIQVLDAPGIISG 127 Query: 220 AHQGAGIGDRFL 231 A G G G L Sbjct: 128 ASFGRGRGSEVL 139 >gi|270159972|ref|ZP_06188628.1| GTP-binding protein Era [Legionella longbeachae D-4968] gi|289165284|ref|YP_003455422.1| membrane-associated, 16S rRNA-binding GTPase [Legionella longbeachae NSW150] gi|269988311|gb|EEZ94566.1| GTP-binding protein Era [Legionella longbeachae D-4968] gi|288858457|emb|CBJ12335.1| membrane-associated, 16S rRNA-binding GTPase [Legionella longbeachae NSW150] Length = 294 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 5/63 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST L + + K I + P TT + LGI EG +F+ D PGI Sbjct: 8 IALVGRPNVGKSTLLNCILQQKVSITSKKPQTTRHSILGICTEGDYQFVYVDTPGI---- 63 Query: 221 HQG 223 HQG Sbjct: 64 HQG 66 >gi|150402612|ref|YP_001329906.1| small GTP-binding protein [Methanococcus maripaludis C7] gi|150033642|gb|ABR65755.1| small GTP-binding protein [Methanococcus maripaludis C7] Length = 369 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 37/72 (51%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +G P+ GKST L +T A ++ Y FTTL G+++ + + D PGII Sbjct: 63 ATVAFVGFPSVGKSTLLNKLTNANSEVGAYAFTTLTIIPGLMEHKGAKIQVLDAPGIISG 122 Query: 220 AHQGAGIGDRFL 231 A G G G L Sbjct: 123 ASFGRGRGSEVL 134 >gi|209542554|ref|YP_002274783.1| GTP-binding protein Era [Gluconacetobacter diazotrophicus PAl 5] gi|209530231|gb|ACI50168.1| GTP-binding protein Era [Gluconacetobacter diazotrophicus PAl 5] Length = 297 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 23/171 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PNAGKST L + AK I TT + LGI+ G + +L D PGI + Sbjct: 8 VAIVGAPNAGKSTLLNRMAGAKLSIVSPKAQTTRFRVLGILMRGESQILLVDTPGIFQPR 67 Query: 221 HQGAGIGDRFLKH-----TERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKK 272 + DR + E + L +V A L E+V+A I++ L ++ R++ Sbjct: 68 RK----LDRAMVAAAWTGAEDADITLLLVDARRGLSESVRA----IVERL----AQSRRR 115 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECL 322 + +V L++ D VD L EL+ + + S+ +G G+ +L L Sbjct: 116 VWLV-LNKTDLVDRQALLPLTAELSALLDVEHVYMVSARSGDGVEDLLSAL 165 >gi|332995407|gb|AEF05462.1| GTP-binding protein HflX [Alteromonas sp. SN2] Length = 429 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 6/113 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T A AD F TL P L + + ILAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNTITDAHVYAADQLFATLDPTLRKIDLKDVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 ++ H L+ T+ +LLH+V + A Y+ +DE++ E+ Sbjct: 257 RHLPHDLVAAFKATLQETQEADLLLHVVDIAD----AKYRETIDEVNDVLEEI 305 >gi|227875234|ref|ZP_03993376.1| possible GTP-binding protein HflX [Mobiluncus mulieris ATCC 35243] gi|227844139|gb|EEJ54306.1| possible GTP-binding protein HflX [Mobiluncus mulieris ATCC 35243] Length = 513 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 8/170 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I+G NAGKS+ L +T A + D F TL P++ + + LAD G + Sbjct: 261 VPAVAIVGYTNAGKSSLLNRLTGADVLVHDALFATLDPSVRKTHTATGRVYTLADTVGFV 320 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + Q L+ T +LLH+V A + + + L S +R ++ Sbjct: 321 RRLPTQLVEAFRSTLEETAMADLLLHVVDAANPDPMGEIEAVNATLDTIES-IRHTPVVM 379 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++++D + TLA + L E S+ +G GI ++ E + ++ Sbjct: 380 VINKVDAASAPTLALLRRLLPEAV-----EVSARSGQGIERLQEVIASRL 424 >gi|190347839|gb|EDK40187.2| hypothetical protein PGUG_04285 [Meyerozyma guilliermondii ATCC 6260] Length = 400 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 18/100 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------KEG 204 G++GL N GKSTF ++TR A+YPF T+ V K+ Sbjct: 37 GVVGLANVGKSTFFQAITRTSLGNPANYPFATIDTEESQVVVKSPILDHYLQLFQSQKKI 96 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + DI G+ ++A G G+G++FL + H+V Sbjct: 97 SSTLTIYDIAGLTRDASSGKGMGNKFLSEIRSVDGIFHMV 136 >gi|159905613|ref|YP_001549275.1| small GTP-binding protein [Methanococcus maripaludis C6] gi|159887106|gb|ABX02043.1| small GTP-binding protein [Methanococcus maripaludis C6] Length = 369 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 37/72 (51%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +G P+ GKST L +T A ++ Y FTTL G+++ + + D PGII Sbjct: 63 ATVAFVGFPSVGKSTLLNKLTNANSEVGAYAFTTLTIIPGLMEHKGAKIQVLDAPGIISG 122 Query: 220 AHQGAGIGDRFL 231 A G G G L Sbjct: 123 ASFGRGRGSEVL 134 >gi|226291652|gb|EEH47080.1| nucleolar GTP-binding protein [Paracoccidioides brasiliensis Pb18] Length = 662 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL ++T+A + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLRNITKADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ S + + + QC + D++ +NS KI V Sbjct: 232 MNTIE-----MQSITAIAHLRSVILYFMDLSEQCGYSVTDQIKLFNSIKPLFANKIVYVV 286 Query: 278 LSQIDTVDSDTL-ARKKNELATQCGQVPFEF---SSITGHGIPQILECLHDKIFSIR 330 +++ID + + L A + EL + E S T G+ + D++ + R Sbjct: 287 VNKIDVMRPEDLDASTQEELQSILKPAEVEMLQVSCATTEGVTAVKNAACDRLLAER 343 >gi|310780551|ref|YP_003968883.1| GTP-binding proten HflX [Ilyobacter polytropus DSM 2926] gi|309749874|gb|ADO84535.1| GTP-binding proten HflX [Ilyobacter polytropus DSM 2926] Length = 441 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 31/191 (16%) Query: 159 IADIGIIGLPNAGKSTFLASV--------TRAKPKIADYPFTTLYP-NLGIVKEGYKEFI 209 I + ++G NAGKST + + TR K + D F TL P + I E EFI Sbjct: 208 IPTVALVGYTNAGKSTIMNHLMQMEEEEDTRTKSFVKDMLFATLDPFHRKIKLEDNLEFI 267 Query: 210 LADIPGII-KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAY 265 L D G + K H L+ E +LL++V E+ + + +++EL+ Sbjct: 268 LIDTVGFVSKLPHDLVESFKSTLEEVEEASLLLYVVDISREDYKHQLKVTRNVVEELNVK 327 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILEC 321 ++ +V ++ID + S+ L + G + FE S+I G GI ++L+ Sbjct: 328 DTPF-----LVVYNKIDKLSSEELEK--------TGDI-FEKSVYISAIEGKGIGELLKE 373 Query: 322 LHDKIFSIRGE 332 + +IF E Sbjct: 374 IEKEIFKTSKE 384 >gi|307172986|gb|EFN64128.1| Probable nucleolar GTP-binding protein 1 [Camponotus floridanus] Length = 639 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 31/175 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ ++ Sbjct: 171 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLTWQVIDTPGILDHSL 230 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAA--YQCILDELSAYNSELRKKI------ 273 + ER + + V+AL +++AA Y C L E + E + K+ Sbjct: 231 E------------ERNVIEMQAVTAL-AHLRAAVLYFCDLSEQCGHTLEEQVKLFESIKP 277 Query: 274 ------EIVGLSQIDTVDSDTLARKKNELATQC---GQVP-FEFSSITGHGIPQI 318 I+ L++ D V L+ +K + +P E S+IT G+ ++ Sbjct: 278 LFTNKPLIIVLNKTDIVRLSELSPEKRAILKSFENDANIPMLEMSTITDDGVMEV 332 >gi|6321773|ref|NP_011849.1| Ylf2p [Saccharomyces cerevisiae S288c] gi|732143|sp|P38746|YLF2_YEAST RecName: Full=Putative GTP-binding protein YLF2 gi|2289884|gb|AAB65067.1| Weakly similiar to GTP-binding protein (B. subtillis) and glycogen phosphorylases (human and rabbit) [Saccharomyces cerevisiae] gi|190405769|gb|EDV09036.1| hypothetical protein SCRG_04690 [Saccharomyces cerevisiae RM11-1a] gi|259147013|emb|CAY80268.1| Ylf2p [Saccharomyces cerevisiae EC1118] gi|285809885|tpg|DAA06672.1| TPA: Ylf2p [Saccharomyces cerevisiae S288c] gi|323333314|gb|EGA74711.1| Ylf2p [Saccharomyces cerevisiae AWRI796] gi|323354755|gb|EGA86589.1| Ylf2p [Saccharomyces cerevisiae VL3] Length = 405 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 19/108 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTL-------------YPNLGIVKEGYK-- 206 GI+GL N GKSTF ++T +K A+YPF T+ NL + + K Sbjct: 20 GIVGLANVGKSTFFQAITNSKLGNPANYPFATIDAECAKVNIPSVPLSNLLRIYQSAKCV 79 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA-LEENV 251 + DI G+ + A QG G+G++FL + +V L+E++ Sbjct: 80 PGTLTIYDIAGLTRGASQGHGLGNKFLNDIRHVEGIFQVVRGFLKEDI 127 >gi|302508541|ref|XP_003016231.1| hypothetical protein ARB_05629 [Arthroderma benhamiae CBS 112371] gi|291179800|gb|EFE35586.1| hypothetical protein ARB_05629 [Arthroderma benhamiae CBS 112371] Length = 319 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 43/82 (52%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 G IG P+ GKST ++ +T + A Y FTTL G V + + D+PGII+ A Sbjct: 45 GFIGFPSVGKSTLMSKLTGQHSEAAAYEFTTLTTVPGQVLYNGAKIQMLDLPGIIQGAKD 104 Query: 223 GAGIGDRFLKHTERTHVLLHIV 244 G G G + + + H++ ++ Sbjct: 105 GKGRGRQVIAVAKTCHLIFIVL 126 >gi|256274399|gb|EEU09303.1| Ylf2p [Saccharomyces cerevisiae JAY291] Length = 405 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 19/108 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTL-------------YPNLGIVKEGYK-- 206 GI+GL N GKSTF ++T +K A+YPF T+ NL + + K Sbjct: 20 GIVGLANVGKSTFFQAITNSKLGNPANYPFATIDAECAKVNIPSVPLSNLLRIYQSAKCV 79 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA-LEENV 251 + DI G+ + A QG G+G++FL + +V L+E++ Sbjct: 80 PGTLTIYDIAGLTRGASQGHGLGNKFLNDIRHVEGIFQVVRGFLKEDI 127 >gi|242051240|ref|XP_002463364.1| hypothetical protein SORBIDRAFT_02g042420 [Sorghum bicolor] gi|241926741|gb|EER99885.1| hypothetical protein SORBIDRAFT_02g042420 [Sorghum bicolor] Length = 478 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 35/59 (59%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I + ++G PN GKS+ + ++ KP++ YPFTT +G + ++ F + D PG++ Sbjct: 280 IPTLCLVGSPNVGKSSLVRILSSGKPEVCSYPFTTRGILMGHIVSNHERFQVTDTPGLL 338 >gi|134045181|ref|YP_001096667.1| small GTP-binding protein [Methanococcus maripaludis C5] gi|132662806|gb|ABO34452.1| small GTP-binding protein [Methanococcus maripaludis C5] Length = 369 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 37/72 (51%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +G P+ GKST L +T A ++ Y FTTL G+++ + + D PGII Sbjct: 63 ATVAFVGFPSVGKSTLLNKLTNANSEVGAYAFTTLTIIPGLMEHKGAKIQVLDAPGIISG 122 Query: 220 AHQGAGIGDRFL 231 A G G G L Sbjct: 123 ASFGRGRGSEVL 134 >gi|515851|emb|CAA82332.1| putative ATP/GTP binding protein Ylf2p [Saccharomyces cerevisiae] Length = 405 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 19/108 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTL-------------YPNLGIVKEGYK-- 206 GI+GL N GKSTF ++T +K A+YPF T+ NL + + K Sbjct: 20 GIVGLANVGKSTFFQAITNSKLGNPANYPFATIDAECAKVNIPTVPLSNLLRIYQSAKCV 79 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA-LEENV 251 + DI G+ + A QG G+G++FL + +V L+E++ Sbjct: 80 PGTLTIYDIAGLTRGASQGHGLGNKFLNDIRHVEGIFQVVRGFLKEDI 127 >gi|27379603|ref|NP_771132.1| GTP-binding protein HFLX [Bradyrhizobium japonicum USDA 110] gi|27352755|dbj|BAC49757.1| GTP-binding protein HFLX [Bradyrhizobium japonicum USDA 110] Length = 437 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 16/179 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST +TRA + AD F TL P L + + + +L+D G I N Sbjct: 205 VALVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNL 264 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIV 276 Q L+ V+LH+ E+ +A +L +L + + IE+ Sbjct: 265 PTQLIAAFRATLEEVLEADVILHVRDISHEDAEAQQSDVDAVLRQLGINPDDSGRIIEV- 323 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE-----FSSITGHGIPQILECLHDKIFSIR 330 ++ID D A ++ EL + P + S+++G G+ +L + +++ + R Sbjct: 324 -WNKIDRYD----AEQREELLNIAARRPEDHPAMLVSAVSGEGVDALLAAIEERLAAKR 377 >gi|207344810|gb|EDZ71824.1| YHL014Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 398 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 18/100 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTL-------------YPNLGIVKEGYK-- 206 GI+GL N GKSTF ++T +K A+YPF T+ NL + + K Sbjct: 20 GIVGLANVGKSTFFQAITNSKLGNPANYPFATIDAECAKVNIPSVPLSNLLRIYQSAKCV 79 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + DI G+ + A QG G+G++FL + +V Sbjct: 80 PGTLTIYDIAGLTRGASQGHGLGNKFLNDIRHVEGIFQVV 119 >gi|171687433|ref|XP_001908657.1| hypothetical protein [Podospora anserina S mat+] gi|170943678|emb|CAP69330.1| unnamed protein product [Podospora anserina S mat+] Length = 394 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST ++T+ A++P+ T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITKCNLGNPANFPYATIDPEEARVIVPDERYDWLCEKYKPKSRV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+ + A GAG+G+ FL H + +V ++ Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDD 128 >gi|323455244|gb|EGB11113.1| hypothetical protein AURANDRAFT_22083 [Aureococcus anophagefferens] Length = 670 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA+ ++ Y FTT +G + Y + + D PGI+ + Sbjct: 173 VCGFPNVGKSSFMNKVTRAEVEVQPYAFTTKSLYVGHMDHRYLRWQVIDTPGILDHE--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + R + + L H+ A+ V + QC Sbjct: 230 --LEKRNVIEMQAVTALAHLPCAVLFFVDVSEQC 261 >gi|86170944|ref|XP_966116.1| nucleolar GTP-binding protein 1, putative [Plasmodium falciparum 3D7] gi|46361081|emb|CAG25368.1| nucleolar GTP-binding protein 1, putative [Plasmodium falciparum 3D7] Length = 686 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 17/168 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ V+RA + Y FTT +G ++ + D PG++ A Sbjct: 174 IILSGAPNVGKSSFMNIVSRANVDVQSYSFTTKNLYVGHFDHKLNKYQIIDTPGLLDRAF 233 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAY---NSELRKKIEI 275 + ++ T T L HI + + + QC I ++++ + S K + Sbjct: 234 ENRNT----IEMTTIT-ALAHINGVILFIIDISEQCGLTIKEQINLFYSIKSVFSNKSIV 288 Query: 276 VGLSQIDTVDSDTLARKKNELATQC---GQVPFEFSS---ITGHGIPQ 317 +G ++ID + D+L+ L Q + P +FSS +TG G+ Q Sbjct: 289 IGFNKIDKCNMDSLSIDNKLLIKQILDNVKNPIKFSSFSTLTGVGVEQ 336 >gi|225679887|gb|EEH18171.1| nucleolar GTP-binding protein [Paracoccidioides brasiliensis Pb03] Length = 662 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL ++T+A + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLRNITKADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ S + + + QC + D++ +NS KI V Sbjct: 232 MNTIE-----MQSITAIAHLRSVILYFMDLSEQCGYSVTDQIKLFNSIKPLFANKIVYVV 286 Query: 278 LSQIDTVDSDTL-ARKKNELATQCGQVPFEF---SSITGHGIPQILECLHDKIFSIR 330 +++ID + + L A + EL + E S T G+ + D++ + R Sbjct: 287 VNKIDVMRPEDLDASTQEELQSILKPAEVEMLQVSCATTEGVTAVKNAACDRLLAER 343 >gi|146305671|ref|YP_001186136.1| GTP-binding protein, HSR1-related [Pseudomonas mendocina ymp] gi|145573872|gb|ABP83404.1| GTP-binding protein HflX [Pseudomonas mendocina ymp] Length = 433 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 5/113 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T ++ AD F TL P L ++ + +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNALTASEVYAADQLFATLDPTLRRLELDDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYN 266 ++ H+ L+ + + +LLH++ A E A Q +L E+ A+ Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDAHEPERMAQIEQVQAVLKEIGAHE 310 >gi|315650683|ref|ZP_07903739.1| GTP-binding protein [Eubacterium saburreum DSM 3986] gi|315487060|gb|EFU77386.1| GTP-binding protein [Eubacterium saburreum DSM 3986] Length = 415 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 27/169 (15%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN 219 ++ I+G NAGKST L +T A D F TL P +K + +E ++ D G I+ Sbjct: 200 NVAIVGYTNAGKSTLLNKLTDANILAEDKLFATLDPTTRKLKLDSGQEILVTDTVGFIRK 259 Query: 220 A-HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 H L+ + ++L+H+V A N +A+ Q L Y++ L Sbjct: 260 LPHHLIEAFKSTLEEAKYANLLIHMVDA--SNEEASSQM----LVVYDT----------L 303 Query: 279 SQIDTVDSDTLAR-KKNELATQCGQVPFEF--------SSITGHGIPQI 318 +D VD D + K +L + ++P +F S+ TG GI + Sbjct: 304 RSLDVVDKDIITVFNKTDLTDKDMELPRDFHADKILRMSAKTGEGIEDL 352 >gi|156052647|ref|XP_001592250.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980] gi|154704269|gb|EDO04008.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980 UF-70] Length = 395 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 24/137 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLG--IVKEGYKEFI---------- 209 GI+GL N GKST ++T+ A++PF T+ P IV + +++ Sbjct: 24 GIVGLANVGKSTLFQAITKCSLGNPANFPFATIDPEESRVIVPDDRYDWLCEKYNPKSRV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILD 260 + DI G+ + A +G G+G+ FL H + +V ++ +++ + D Sbjct: 84 PAHLTIYDIAGLTRGASKGEGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHIEGDVDPVRD 143 Query: 261 ELSAYNSELR-KKIEIV 276 L+ + ELR K IE V Sbjct: 144 -LTIISDELRIKDIEFV 159 >gi|121715664|ref|XP_001275441.1| nucleolar GTP-binding protein [Aspergillus clavatus NRRL 1] gi|119403598|gb|EAW14015.1| nucleolar GTP-binding protein [Aspergillus clavatus NRRL 1] Length = 655 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL S+TRA + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLRSITRADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC + D++ ++S KI + Sbjct: 232 MNTIE-----MQSITAIAHLRSAIMYFMDLSEQCGYSVADQIKLFHSIRPLFANKIVFLV 286 Query: 278 LSQIDTVDSDTLARK-KNELAT--QCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + L + + EL + G V + S T G+ + DK+ + R Sbjct: 287 VNKIDVRRPEDLEPEYQEELQKILKSGDVELLQLSCATTEGVTAVKNAACDKLLAER 343 >gi|331092167|ref|ZP_08340997.1| GTP-binding protein HflX [Lachnospiraceae bacterium 2_1_46FAA] gi|330401939|gb|EGG81513.1| GTP-binding protein HflX [Lachnospiraceae bacterium 2_1_46FAA] Length = 415 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 18/169 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 + I+G NAGKST L +T A D F TL P G+ + +E +L D G I+ Sbjct: 204 VAIVGYTNAGKSTLLNKLTGASVLEEDKLFATLDPTTRGLKLQSKQEILLTDTVGFIRKL 263 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKIEI 275 H L+ + ++LH+V A L+E + Y+ L +L N + I Sbjct: 264 PHHLIEAFKSTLEEAKYADIILHVVDASNPQLDEQMHIVYET-LQQLEVVNKPI-----I 317 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 ++ D D + + R + S+ TG G+ +LE + + Sbjct: 318 TAFNKQDKADGEMIIRDFK------ADYIVKISAKTGEGLSGLLETIEE 360 >gi|257056737|ref|YP_003134569.1| GTP-binding proten HflX [Saccharomonospora viridis DSM 43017] gi|256586609|gb|ACU97742.1| GTP-binding proten HflX [Saccharomonospora viridis DSM 43017] Length = 482 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 11/166 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + ++G NAGKS+ L +VT A + D F TL P + + + L D G + Sbjct: 254 VPSVALVGYTNAGKSSILNAVTGAGVLVEDALFATLDPTTRRTETPDGRVYTLTDTVGFV 313 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIV---SALEENVQAAYQCILDELSAYNSELRKKI 273 ++ HQ L +LLH+V +A E+ A + +L E++ +E Sbjct: 314 RHLPHQLVDAFRSTLDEAADADLLLHVVDGAAAAPEDQVVAVREVLAEIAEKRAEPLPP- 372 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 E+V +++ D D TLAR +N L S+ +G GI +L Sbjct: 373 ELVVINKADIADEMTLARLRNLLPDAVV-----VSAHSGQGIDTLL 413 >gi|162147936|ref|YP_001602397.1| GTP-binding protein Era [Gluconacetobacter diazotrophicus PAl 5] gi|161786513|emb|CAP56095.1| putative GTP-binding protein era homolog [Gluconacetobacter diazotrophicus PAl 5] Length = 305 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 23/171 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PNAGKST L + AK I TT + LGI+ G + +L D PGI + Sbjct: 16 VAIVGAPNAGKSTLLNRMAGAKLSIVSPKAQTTRFRVLGILMRGESQILLVDTPGIFQPR 75 Query: 221 HQGAGIGDRFLKH-----TERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKK 272 + DR + E + L +V A L E+V+A I++ L ++ R++ Sbjct: 76 RK----LDRAMVAAAWTGAEDADITLLLVDARRGLSESVRA----IVERL----AQSRRR 123 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECL 322 + +V L++ D VD L EL+ + + S+ +G G+ +L L Sbjct: 124 VWLV-LNKTDLVDRQALLPLTAELSALLDVEHVYMVSARSGDGVEDLLSAL 173 >gi|150401299|ref|YP_001325065.1| small GTP-binding protein [Methanococcus aeolicus Nankai-3] gi|150014002|gb|ABR56453.1| small GTP-binding protein [Methanococcus aeolicus Nankai-3] Length = 367 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 38/72 (52%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +G P+ GKST L ++T A ++ Y FTTL G+++ + + D PGII Sbjct: 61 ATVAFVGFPSVGKSTLLNTITNANSEVGAYAFTTLTIIPGLLEYKGAKIQVLDAPGIITG 120 Query: 220 AHQGAGIGDRFL 231 A G G G L Sbjct: 121 ASFGRGRGSEVL 132 >gi|144899203|emb|CAM76067.1| GTP-binding protein, HSR1 [Magnetospirillum gryphiswaldense MSR-1] Length = 437 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 9/170 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST +T+++ D F TL P + G+ ++ IL+D G I + Sbjct: 210 VALVGYTNAGKSTLFNRLTQSEVLAKDMLFATLDPTMRGLKLPSGRQIILSDTVGFISDL 269 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIV 276 H+ L+ V++H+ + +A + +L EL + R +E Sbjct: 270 PHELVAAFRATLEEVLEADVVVHVRDMAHPDTEAQASDVELVLKELGLGDMVDRGLVE-- 327 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L++ID + N+ A + +P S++TG G+ L C+ +K+ Sbjct: 328 ALNKIDLLPEGGREGVVNQAARKPTALP--ISALTGAGVDAFLACIDEKL 375 >gi|118383637|ref|XP_001024973.1| hypothetical protein TTHERM_00242500 [Tetrahymena thermophila] gi|89306740|gb|EAS04728.1| hypothetical protein TTHERM_00242500 [Tetrahymena thermophila SB210] Length = 654 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 15/164 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + I G PN GKS+F+ +T+A ++ YPFTT +G + + + D PGI+ + Sbjct: 170 LMITGYPNVGKSSFINQITKANVEVQSYPFTTQSLYVGHTEYQNVRWQVIDSPGILDHP- 228 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + R + L H+ + + + + QC I ++S +NS + K Sbjct: 229 ----LEQRNTIEMQSITALAHLKACILFFIDLSEQCSYSIEQQVSLFNSIKPLFKNKPLC 284 Query: 276 VGLSQIDTVDSDTLARKK----NELATQCGQVPFEFSSITGHGI 315 + LS+ D + L+++ N LA + S+ TG GI Sbjct: 285 IVLSKCDLKSFEDLSQENKDILNSLAKDQNVSLLQMSNKTGEGI 328 >gi|46111765|ref|XP_382940.1| hypothetical protein FG02764.1 [Gibberella zeae PH-1] Length = 394 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVK----------EGYK----- 206 GI+GL N GKST ++T++ A++P+ T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITKSNLGNPANFPYATIDPEEARVVVPDDRFDWLVEKYKPKSVV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+ + + GAG+G+ FL H + +V ++ Sbjct: 84 PANLTVYDIAGLTRGSSTGAGLGNSFLSHIRAVDAIFQVVRCFDD 128 >gi|224368191|ref|YP_002602354.1| Era [Desulfobacterium autotrophicum HRM2] gi|223690907|gb|ACN14190.1| Era [Desulfobacterium autotrophicum HRM2] Length = 300 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 10/131 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I+G PNAGKST L +V K I + P TT LG+V+ + I D PG I A Sbjct: 16 IAIVGAPNAGKSTLLNTVLGQKISITSKKPQTTRDRILGVVERPGAQIIFVDTPG-IHRA 74 Query: 221 HQ--GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 H I D+ L + +L ++ ++ ++ I+++L N K ++ L Sbjct: 75 HSLLNKKIVDQALSAVDDVDAVLLMIDVTSKDTESEA-LIIEQLQKRN-----KAVVLAL 128 Query: 279 SQIDTVDSDTL 289 ++ID V S+ + Sbjct: 129 NKIDLVKSNEI 139 >gi|225011396|ref|ZP_03701834.1| GTP-binding protein Era [Flavobacteria bacterium MS024-2A] gi|225003899|gb|EEG41871.1| GTP-binding protein Era [Flavobacteria bacterium MS024-2A] Length = 296 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 10/164 (6%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I+G PN GKST + A V + I TT + LGI+ + +L+D PG+IK A Sbjct: 11 ISIVGNPNVGKSTLMNALVGKELSIITAKAQTTRHRILGIINGDDFQMVLSDTPGVIKPA 70 Query: 221 HQGAGIGDRFLKHTERT-HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 ++ F+K VL+++VS E + + + +++ + L ++ ++ Sbjct: 71 YEMQTSMMNFVKEALIDGDVLVYLVSP--EETELKDEKLFEKIKKTKAPL-----LILIN 123 Query: 280 QIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECL 322 +ID + + L T+ + + S++TG +P++L+ L Sbjct: 124 KIDLISQEALEASVLHWQTEFPKATVYPISALTGFFVPELLDIL 167 >gi|330752593|emb|CBL87539.1| GTP-binding protein era homolog [uncultured Flavobacteria bacterium] Length = 295 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 20/173 (11%) Query: 162 IGIIGLPNAGKSTFLAS-----VTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + IIG PN GKSTF+ + ++ PK TT + LGIV + + +D PGI Sbjct: 12 VSIIGNPNVGKSTFMNALLGLDISIVTPKAQ----TTRHRILGIVNGHNFQVVFSDTPGI 67 Query: 217 IKNAHQGAGIGDRFLKHTER-THVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 IK +++ F+K + +++++V+A +EN++ Q +L+++ S L Sbjct: 68 IKPSYEMQNSMMNFVKDALKDADIIIYMVTAKDENLKD--QKLLNQIKKTKSPL-----F 120 Query: 276 VGLSQIDTVDSDTLARKKNELAT--QCGQVPFEFSSITGHGIPQILECLHDKI 326 V +++ID + +K + T V + S++ G I ++ + + I Sbjct: 121 VLINKIDKSTQKLVEKKVSYWKTIFPLANV-YPISALNGFFISEVFNSIKELI 172 >gi|255023692|ref|ZP_05295678.1| GTPase ObgE [Listeria monocytogenes FSL J1-208] Length = 63 Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 30/61 (49%), Positives = 45/61 (73%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D+ K+Y+++G+GG G ++FRREKF+ GGP GG GG+G DV L TL+DFR++ Sbjct: 2 FVDQVKIYVKAGNGGDGMVAFRREKFVPNGGPAGGDGGKGADVVFVVDEGLRTLVDFRFK 61 Query: 63 Q 63 + Sbjct: 62 R 62 >gi|114775464|ref|ZP_01451032.1| GTP-binding protein Era [Mariprofundus ferrooxydans PV-1] gi|114553575|gb|EAU55956.1| GTP-binding protein Era [Mariprofundus ferrooxydans PV-1] Length = 301 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 20/137 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST + + RAK I P TT + LGI + ++ I D PGI Sbjct: 11 VALLGRPNVGKSTLMNHIIRAKVAIVTPKPQTTRHRILGIYNDDARQLIFVDTPGI---- 66 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL--------RKK 272 H+G K R V + +A E +V A Q + L EL K+ Sbjct: 67 HKGD-------KQLNRNMVRIAYGAAEEADVLAIMQDVTCPLDRVTRELIERFADGRLKQ 119 Query: 273 IEIVGLSQIDTVDSDTL 289 I L+++D + + L Sbjct: 120 PRIHVLNKVDAIKKEAL 136 >gi|325924507|ref|ZP_08186026.1| GTP-binding proten HflX [Xanthomonas gardneri ATCC 19865] gi|325545002|gb|EGD16337.1| GTP-binding proten HflX [Xanthomonas gardneri ATCC 19865] Length = 427 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 1/86 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 I ++G NAGKST ++T A+ +AD F TL P + + ILAD G +++ Sbjct: 189 IALVGYTNAGKSTLFNALTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLP 248 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L +LLHIV A Sbjct: 249 HQLVAAFRSTLSEARDADLLLHIVDA 274 >gi|262304193|gb|ACY44689.1| GTP-binding protein [Armillifer armillatus] Length = 277 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---ELSAYN 266 + DI G++KNA +G G+G+ FL H L HI E+++ + +D ++ N Sbjct: 34 VVDIAGLVKNAAEGEGLGNAFLSHVRACDALFHICRTFEDDIVTHVEGDVDPVRDIDIIN 93 Query: 267 SELRKKIE 274 ELRKK E Sbjct: 94 DELRKKDE 101 >gi|261418494|ref|YP_003252176.1| GTP-binding protein Era [Geobacillus sp. Y412MC61] gi|297529346|ref|YP_003670621.1| GTP-binding protein Era [Geobacillus sp. C56-T3] gi|319767545|ref|YP_004133046.1| GTP-binding protein Era [Geobacillus sp. Y412MC52] gi|261374951|gb|ACX77694.1| GTP-binding protein Era [Geobacillus sp. Y412MC61] gi|297252598|gb|ADI26044.1| GTP-binding protein Era [Geobacillus sp. C56-T3] gi|317112411|gb|ADU94903.1| GTP-binding protein Era [Geobacillus sp. Y412MC52] Length = 302 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D P TT G+ + + I D PG+ K Sbjct: 11 VAIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTDDDAQIIFIDTPGVHKPK 70 Query: 221 HQGAGIGDRFLK----HTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K ++L +V+A EE I++ L ++ + + Sbjct: 71 HK---LGDFMMKVALNALREVDLILFMVNA-EEGFGRGEAFIIERLKEVDTPV-----FL 121 Query: 277 GLSQIDTVDSD---TLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + +L VP S++ G+ + ++LE + +++ Sbjct: 122 VINKIDRVHPDELLPLIDRYKDLYPFAEIVP--ISALEGNNVDRLLEQIKERL 172 >gi|119481179|ref|XP_001260618.1| nucleolar GTP-binding protein [Neosartorya fischeri NRRL 181] gi|119408772|gb|EAW18721.1| nucleolar GTP-binding protein [Neosartorya fischeri NRRL 181] Length = 655 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL S+TRA + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLRSITRADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC + D++ ++S KI + Sbjct: 232 MNTIE-----MQSITAIAHLRSAIMYFMDLSEQCGYSVADQIKLFHSIRPLFANKIVFLV 286 Query: 278 LSQIDTVDSDTLARKKNE---LATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + L + E + G V + S T G+ + DK+ + R Sbjct: 287 VNKIDVRRPEDLEPEYQEEIQKILKSGDVEMLQLSCATTEGVTAVKNAACDKLLAER 343 >gi|88601924|ref|YP_502102.1| small GTP-binding protein domain-containing protein [Methanospirillum hungatei JF-1] gi|88187386|gb|ABD40383.1| Small GTP-binding protein domain [Methanospirillum hungatei JF-1] Length = 370 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 1/102 (0%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L +T + + Y FTTL G ++ + L DIPG+I Sbjct: 64 ATVVLVGFPSTGKSTLLNVLTGTQSETGAYAFTTLTVVPGALEHKGAKIQLLDIPGLIAG 123 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCILD 260 A G G G + +++ +V E++V ++ + D Sbjct: 124 AAMGKGRGKEVIAVVRNADMIVLLVDVFNEKHVDVLFRELYD 165 >gi|221506556|gb|EEE32173.1| nucleolar GTP-binding protein NGB, putative [Toxoplasma gondii VEG] Length = 669 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 9/159 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ SV+ A + + FTT +G Y + + D PGI+ + Sbjct: 126 LTGYPNVGKSSFINSVSNANVDVQPFAFTTKSLFVGHFDFLYNRWQIIDTPGILDHPLDE 185 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL---RKKIEIVGLSQ 280 + + L T TH+ +V L+ + + Y I ++S + S L + K +V L++ Sbjct: 186 RNLIE-MLAITALTHIQSVVVFMLDISEECGY-TIESQVSLFQSLLVLFKNKPILVVLNK 243 Query: 281 IDTVDSDTLARKKNELATQCGQ---VPF-EFSSITGHGI 315 D V L+ + E+ G+ V F E S++TG G+ Sbjct: 244 TDKVRLANLSPEHQEIIRTMGKDRTVEFVEASTLTGAGV 282 >gi|15602772|ref|NP_245844.1| hypothetical protein PM0907 [Pasteurella multocida subsp. multocida str. Pm70] gi|12721223|gb|AAK02991.1| HflX [Pasteurella multocida subsp. multocida str. Pm70] Length = 448 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 7/112 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T+A AD F TL P L ++ + ILAD G I Sbjct: 219 IPTISLVGYTNAGKSTLFNLITQANVYAADQLFATLDPTLRRLQIQDVGTTILADTVGFI 278 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSA 264 ++ H L+ T +LLH++ + EN+ A + +L E++A Sbjct: 279 RHLPHDLVSAFKSTLQETTEAALLLHVIDCADPRKLENIHAV-EAVLKEINA 329 >gi|171688544|ref|XP_001909212.1| hypothetical protein [Podospora anserina S mat+] gi|170944234|emb|CAP70344.1| unnamed protein product [Podospora anserina S mat+] Length = 660 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 32/54 (59%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + G PN GKS+F++SVTRA + Y FTT +G + Y + + D PGI+ Sbjct: 170 VAGFPNVGKSSFVSSVTRADTPVEPYAFTTKSLFVGHLDYKYLRYQVIDTPGIL 223 >gi|75910714|ref|YP_325010.1| GTP-binding protein Era [Anabaena variabilis ATCC 29413] gi|75704439|gb|ABA24115.1| Small GTP-binding protein [Anabaena variabilis ATCC 29413] Length = 337 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 16/168 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 IGIIG PN GKST + + K I T L GIV + I D PGI K Sbjct: 48 IGIIGRPNVGKSTLMNQLVGQKIAITSPVAQTTRNRLRGIVTTPEAQLIFVDTPGIHKPH 107 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 HQ +G+ +K+ E V+L +V A + I D L + + I+ Sbjct: 108 HQ---LGEVLVKNAKLAIESVDVVLFVVDG-TVACGAGDRFIADLLIHSKTPV-----IL 158 Query: 277 GLSQIDTVDSDT--LARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 G++++D SD+ + +LA+ +FS+ TG +PQ+ E L Sbjct: 159 GINKVDQQPSDSQNIDDSYQQLASAYQWPTVKFSAKTGAELPQLQELL 206 >gi|33241830|ref|NP_876771.1| GTP binding protein hflX [Chlamydophila pneumoniae TW-183] gi|33236339|gb|AAP98428.1| GTP binding protein hflX [Chlamydophila pneumoniae TW-183] Length = 472 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 16/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I +IG N+GKST L +T A + D F TL P V G + +L D G I Sbjct: 229 IPTFALIGYTNSGKSTLLNLLTAADTYVEDKLFATLDPKTRKCVLPGGRHVLLTDTVGFI 288 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 + H L+ VLLH+V A E+VQ Y + EL ++ K Sbjct: 289 RKLPHTLVAAFKSTLEAAFHEDVLLHVVDASHPLALEHVQTTYD-LFQEL-----KIEKP 342 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I L+++D + ++ K L+ +P S+ TG GI +L + + I Sbjct: 343 RIITVLNKVDRLPQGSIPMKLRLLSP----LPVLISAKTGEGIQNLLSLMTEII 392 >gi|16752564|ref|NP_444826.1| GTP-binding protein HflX, putative [Chlamydophila pneumoniae AR39] gi|7189200|gb|AAF38134.1| GTP-binding protein HflX, putative [Chlamydophila pneumoniae AR39] Length = 472 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 16/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I +IG N+GKST L +T A + D F TL P V G + +L D G I Sbjct: 229 IPTFALIGYTNSGKSTLLNLLTAADTYVEDKLFATLDPKTRKCVLPGGRHVLLTDTVGFI 288 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 + H L+ VLLH+V A E+VQ Y + EL ++ K Sbjct: 289 RKLPHTLVAAFKSTLEAAFHEDVLLHVVDASHPLALEHVQTTYD-LFQEL-----KIEKP 342 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I L+++D + ++ K L+ +P S+ TG GI +L + + I Sbjct: 343 RIITVLNKVDRLPQGSIPMKLRLLSP----LPVLISAKTGEGIQNLLSLMTEII 392 >gi|312380690|gb|EFR26617.1| hypothetical protein AND_07185 [Anopheles darlingi] Length = 1043 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 16/166 (9%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 564 ICGFPNVGKSSFLNKVTRADVDVQPYAFTTKSLYVGHMDYKYLRWQVIDTPGILDHP--- 620 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + +R + + + H+ + + + + QC I ++ ++S K ++ Sbjct: 621 --LEERNVIEMQAITAMAHLRACIMYVMDVSEQCGHSIEEQAQLFDSIKPLFANKPLVLV 678 Query: 278 LSQIDTVDSDTLARKKNELATQCGQ----VP-FEFSSITGHGIPQI 318 L++ D + L+ +K ++ + +P E S+ T G+ Q+ Sbjct: 679 LNKTDILKLSELSPEKQKIIEDLSEDRELIPILEMSTATEEGVMQV 724 >gi|237831975|ref|XP_002365285.1| nucleolar GTP-binding protein, putative [Toxoplasma gondii ME49] gi|211962949|gb|EEA98144.1| nucleolar GTP-binding protein, putative [Toxoplasma gondii ME49] Length = 669 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 9/159 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ SV+ A + + FTT +G Y + + D PGI+ + Sbjct: 126 LTGYPNVGKSSFINSVSNANVDVQPFAFTTKSLFVGHFDFLYNRWQIIDTPGILDHPLDE 185 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL---RKKIEIVGLSQ 280 + + L T TH+ +V L+ + + Y I ++S + S L + K +V L++ Sbjct: 186 RNLIE-MLAITALTHIQSVVVFMLDISEECGY-TIESQVSLFQSLLVLFKNKPILVVLNK 243 Query: 281 IDTVDSDTLARKKNELATQCGQ---VPF-EFSSITGHGI 315 D V L+ + E+ G+ V F E S++TG G+ Sbjct: 244 TDKVRLANLSPEHQEIIRTMGKDRTVEFVEASTLTGAGV 282 >gi|15618389|ref|NP_224674.1| GTP binding protein [Chlamydophila pneumoniae CWL029] gi|15836009|ref|NP_300533.1| GTP binding protein [Chlamydophila pneumoniae J138] gi|4376763|gb|AAD18618.1| GTP Binding Protein [Chlamydophila pneumoniae CWL029] gi|8978848|dbj|BAA98684.1| GTP binding protein [Chlamydophila pneumoniae J138] Length = 472 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 16/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I +IG N+GKST L +T A + D F TL P V G + +L D G I Sbjct: 229 IPTFALIGYTNSGKSTLLNLLTAADTYVEDKLFATLDPKTRKCVLPGGRHVLLTDTVGFI 288 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 + H L+ VLLH+V A E+VQ Y + EL ++ K Sbjct: 289 RKLPHTLVAAFKSTLEAAFHEDVLLHVVDASHPLALEHVQTTYD-LFQEL-----KIEKP 342 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I L+++D + ++ K L+ +P S+ TG GI +L + + I Sbjct: 343 RIITVLNKVDRLPQGSIPMKLRLLSP----LPVLISAKTGEGIQNLLSLMTEII 392 >gi|222099117|ref|YP_002533685.1| GTP-binding protein HflX [Thermotoga neapolitana DSM 4359] gi|221571507|gb|ACM22319.1| GTP-binding protein HflX [Thermotoga neapolitana DSM 4359] Length = 420 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 7/114 (6%) Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFIL-ADIPG 215 K I + I+G NAGKST L S+T + IAD F TL P +K + IL +D G Sbjct: 198 KKIPHVSIVGYTNAGKSTLLKSLTESDVYIADKLFATLEPVTRRLKLKSGKIILVSDTVG 257 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSA 264 I+ H L+ + + VL+H+V A EE ++A+ + +L+E+ A Sbjct: 258 FIRKLPHTIVSAFKATLEEVKYSDVLIHLVDASDPYAEEKMRAS-EKVLEEIGA 310 >gi|326510569|dbj|BAJ87501.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 471 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 35/59 (59%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I + ++G PN GKS+ + ++ KP++ YPFTT +G + ++ F + D PG++ Sbjct: 270 IPTLCLVGSPNVGKSSLVRILSTGKPEVCSYPFTTRGILMGHIVSNHERFQVTDTPGLL 328 >gi|254693821|ref|ZP_05155649.1| GTP-binding protein HSR1-related [Brucella abortus bv. 3 str. Tulya] gi|261214104|ref|ZP_05928385.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|260915711|gb|EEX82572.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] Length = 472 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 235 VALVGYTNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNL 294 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ T ++LH+ + + A + + + L+ E + +V + Sbjct: 295 PHHLVAAFRATLEEVVETDLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 354 Query: 279 SQIDTVDSDTLARKKNELA--TQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A ++ G+ P S+ITG G+ ++L + +I Sbjct: 355 NKIDNLDESAREAALRLAAAGSEEGR-PIPVSAITGEGVDRLLSLIETRI 403 >gi|269303355|gb|ACZ33455.1| putative phage virion morphogenesis protein/GTP binding protein [Chlamydophila pneumoniae LPCoLN] Length = 472 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 16/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I +IG N+GKST L +T A + D F TL P V G + +L D G I Sbjct: 229 IPTFALIGYTNSGKSTLLNLLTAADTYVEDKLFATLDPKTRKCVLPGGRHVLLTDTVGFI 288 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 + H L+ VLLH+V A E+VQ Y + EL ++ K Sbjct: 289 RKLPHTLVAAFKSTLEAAFHEDVLLHVVDASHPLALEHVQTTYD-LFQEL-----KIEKP 342 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I L+++D + ++ K L+ +P S+ TG GI +L + + I Sbjct: 343 RIITVLNKVDRLPQGSIPMKLRLLSP----LPVLISAKTGEGIQNLLSLMTEII 392 >gi|255713514|ref|XP_002553039.1| KLTH0D07326p [Lachancea thermotolerans] gi|238934419|emb|CAR22601.1| KLTH0D07326p [Lachancea thermotolerans] Length = 415 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 18/100 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV-----------------KEG 204 GI+GL N GKSTF ++T +K A+YPF T+ P V K+ Sbjct: 29 GIVGLANVGKSTFFQAITNSKLGNPANYPFATIEPEEAKVVVPSEQLDHLQKLYASSKKV 88 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + DI G+ + A +G G+G++FL + +V Sbjct: 89 PAVLTIYDIAGLTRGASKGEGLGNKFLNDIRHVDGIFQVV 128 >gi|295667059|ref|XP_002794079.1| nucleolar GTP-binding protein [Paracoccidioides brasiliensis Pb01] gi|226286185|gb|EEH41751.1| nucleolar GTP-binding protein [Paracoccidioides brasiliensis Pb01] Length = 660 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL ++T+A + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLRNITKADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ S + + + QC + D++ +NS KI V Sbjct: 232 MNTIE-----MQSITAIAHLRSVILYFMDLSEQCGYSVTDQIKLFNSIKPLFANKIVYVV 286 Query: 278 LSQIDTVDSDTL-ARKKNELATQCGQVPFEF---SSITGHGIPQILECLHDKIFSIR 330 +++ID + + L A + EL + E S T G+ + D++ + R Sbjct: 287 VNKIDVMRPEDLDASTQEELQSILKPAEVEMLQVSCATTEGVTAVKNAACDRLLAER 343 >gi|151944187|gb|EDN62479.1| conserved protein [Saccharomyces cerevisiae YJM789] gi|323308857|gb|EGA62093.1| Ylf2p [Saccharomyces cerevisiae FostersO] Length = 405 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 19/108 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTL-------------YPNLGIVKEGYK-- 206 GI+GL N GKSTF ++T +K A+YPF T+ NL + + K Sbjct: 20 GIVGLANVGKSTFFQAITNSKLGNPANYPFATIDAECAKVNIPSVPLSNLLRIYQSAKCV 79 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA-LEENV 251 + DI G+ + A QG G+G++FL + +V L+E++ Sbjct: 80 PGTLTIYDIAGLTRGASQGHGLGNKFLNDIRHVDGIFQVVRGFLKEDI 127 >gi|119775495|ref|YP_928235.1| GTP-binding protein EngA [Shewanella amazonensis SB2B] gi|166225853|sp|A1S859|DER_SHEAM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|119767995|gb|ABM00566.1| small GTP-binding protein domain [Shewanella amazonensis SB2B] Length = 488 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +ADYP T G EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L + A + AA I L + R KI Sbjct: 60 IDGTEEGIETKMAEQSLAAIEEADVVLFMTDA-RAGLTAADLAIAQHLRS-----RDKIT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V +++D +D+D+ + +L G+V ++ ++ G G+ ++E Sbjct: 114 FVVANKVDGIDADSACGEFWQLG--LGEV-YQMAAAQGRGVTGLVE 156 Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 21/175 (12%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ + ++L D G+ + A Sbjct: 202 LAIIGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSVYIPMERDGRNYVLIDTAGVRRRA 261 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALE---ENVQAAYQCILDELSAYNSELRKKI 273 I + LK E ++V+L ++ A E E +L+ A Sbjct: 262 RVHEVIEKFSVIKTLKAVEDSNVVLLVIDAHEGIAEQDLGLLGFVLNSGRAL-------- 313 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 ++ +++ D +D D R K EL + G + F S++ G G+ + E + + Sbjct: 314 -VLAVNKWDGLDQDVKDRVKTELDRRLGFIDFARIHFISALHGTGVGHLFESIEE 367 >gi|220934077|ref|YP_002512976.1| GTP-binding proten HflX [Thioalkalivibrio sp. HL-EbGR7] gi|219995387|gb|ACL71989.1| GTP-binding proten HflX [Thioalkalivibrio sp. HL-EbGR7] Length = 417 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 7/112 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +T A AD F TL P L V + ILAD G + Sbjct: 182 IPTVSLVGYTNAGKSTLFNRLTNAGVYAADQLFATLDPTLRRVDLPDQQAIILADTVGFV 241 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSAL----EENVQAAYQCILDELSA 264 + H L T +LLH+V A E+N+Q +L+E+ A Sbjct: 242 RQLPHDLVAAFKATLTETREASLLLHVVDAADPRREDNIQQVNN-VLEEIGA 292 >gi|303241005|ref|ZP_07327515.1| GTP-binding proten HflX [Acetivibrio cellulolyticus CD2] gi|302591430|gb|EFL61168.1| GTP-binding proten HflX [Acetivibrio cellulolyticus CD2] Length = 619 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 9/165 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + ++G NAGKST + ++ ++ D F TL P +K +E +L D G I+ Sbjct: 403 VALVGYTNAGKSTLMNTLCKSDVLAEDKLFATLDPTARNLKLPNGREALLIDTVGFIRKL 462 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H+ L+ VL+H+V Q + + + L+A + K ++ L+ Sbjct: 463 PHELIESFKSTLEEAVYADVLIHVVDVTSYEAQEQIEVVDNILNALGAS--SKPIVMALN 520 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 ++D ++ RK+ + G+V E S++T G +L+ + D Sbjct: 521 KVDMLEE----RKRAPILNPMGKV-IEISAVTKEGFEDLLKAITD 560 >gi|91977066|ref|YP_569725.1| GTP-binding protein, HSR1-related [Rhodopseudomonas palustris BisB5] gi|91683522|gb|ABE39824.1| GTP-binding protein, HSR1-related [Rhodopseudomonas palustris BisB5] Length = 434 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 9/175 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST +TRA + AD F TL P L + + + +L+D G I N Sbjct: 204 VALVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALSLPHGGKAMLSDTVGFISNL 263 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIV 276 Q L+ ++LH+ E+ +A +L +L ++ + +EI Sbjct: 264 PTQLVAAFRATLEEVLEADLILHVRDIAHEDAEAQDRDVDAVLRQL-GVEADSGRILEI- 321 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 ++ID + + L +N A + P F S+++G G+ +L + ++ R Sbjct: 322 -WNKIDRFEPEQLEELRNIAARRSPDHPCFLVSAVSGEGVDDVLLAIEQRLAMTR 375 >gi|241953557|ref|XP_002419500.1| nucleolar GTP-binding protein, putative; ribosome biogenesis protein, putative [Candida dubliniensis CD36] gi|223642840|emb|CAX43095.1| nucleolar GTP-binding protein, putative [Candida dubliniensis CD36] Length = 640 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 15/182 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL +T+A ++ Y FTT +G Y F D PGI+ + Sbjct: 172 ICGYPNVGKSSFLKCITKADVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDRPTEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + + H+ S + + + QC I ++ ++S K +V Sbjct: 232 MNNIE-----MQSIYAIAHLRSCVLYFMDLSEQCGFSIEAQVKLFHSIKPLFANKSVMVV 286 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGH---GIPQILECLHDKIFSIRGEN 333 +++ D + ++ L+ +K EL VP E + H + Q+ +K+ + R E Sbjct: 287 MNKSDIIQAEDLSEEKQELLKTLTTVPGVEIMHASCHEEENVMQVRNQACEKLLTARIEQ 346 Query: 334 EF 335 + Sbjct: 347 KL 348 >gi|156062462|ref|XP_001597153.1| hypothetical protein SS1G_01347 [Sclerotinia sclerotiorum 1980] gi|154696683|gb|EDN96421.1| hypothetical protein SS1G_01347 [Sclerotinia sclerotiorum 1980 UF-70] Length = 652 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL SVTRA + Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLKSVTRADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGIL 225 >gi|332295774|ref|YP_004437697.1| GTP-binding proten HflX [Thermodesulfobium narugense DSM 14796] gi|332178877|gb|AEE14566.1| GTP-binding proten HflX [Thermodesulfobium narugense DSM 14796] Length = 418 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 12/165 (7%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIK 218 +I ++G NAGKST + +T + + D F+TL I+K + K F+ + I K Sbjct: 197 NISLVGYTNAGKSTLMNVLTNSTVLVRDQLFSTLDTKTAIIKFNDDTKVFLTDTVGFIRK 256 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALE--ENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ L ++ LLH+V A + E ++ + + + L NS +I Sbjct: 257 LPHRLIEAFKATLSQISESNFLLHVVDASKPIEIIKQDIKSVNEVLKEINSN-----DIP 311 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILE 320 + + +D T +ELA P+ F S+ITG+GI ++LE Sbjct: 312 SILVFNKIDKCTNLTNVHELAELYK--PYCFISAITGYGIDKLLE 354 >gi|238496437|ref|XP_002379454.1| nucleolar GTP-binding protein (Nog1), putative [Aspergillus flavus NRRL3357] gi|220694334|gb|EED50678.1| nucleolar GTP-binding protein (Nog1), putative [Aspergillus flavus NRRL3357] Length = 801 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL S+T+A + Y FTT +G Y F D PGI+ + + Sbjct: 183 ICGYPNVGKSSFLRSITKADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 242 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC + D++ ++S KI + Sbjct: 243 MNTIE-----MQSITAIAHLRSAVMYFMDFSEQCGYSVADQIKLFHSIRPLFANKIVFLV 297 Query: 278 LSQIDTVDSDTLA---RKKNELATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + L +++ E + G V + S T G+ + DK+ + R Sbjct: 298 VNKIDVRRPEDLEPEYQQEIESILKSGDVEMLQLSCTTTEGVTNVKNAACDKLLAER 354 >gi|114570120|ref|YP_756800.1| GTP-binding protein Era [Maricaulis maris MCS10] gi|122315961|sp|Q0APC5|ERA_MARMM RecName: Full=GTPase Era gi|114340582|gb|ABI65862.1| GTP-binding protein Era [Maricaulis maris MCS10] Length = 314 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 31/179 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI----- 216 +IG PNAGKST + ++ K I + TT + G+ G + +L D PG+ Sbjct: 12 AVIGSPNAGKSTLVNALVGEKVTIVTHKVQTTRFAVRGVALAGETQIVLVDTPGVFAPKT 71 Query: 217 ------IKNAHQGAGIGDRFLKHTERTHVLLHIVSA-----LEENVQAAYQCILDELSAY 265 + A GAG D ++H+V A +E + + E Sbjct: 72 RLDKSMVAAAWSGAGEAD----------TIMHVVDAGARARMEHGGAKSGDSRMVEDDDR 121 Query: 266 NSELRKKIE---IVGLSQIDTVDSDTLARKKNEL-ATQCGQVPFEFSSITGHGIPQILE 320 +E KK E I+ L+++D + D L EL T F S+ TG G+PQ+ E Sbjct: 122 VTEGLKKTEQKAILVLNKVDLMPRDQLLAMSQELYETGVYSEVFMISAKTGSGVPQLRE 180 >gi|51039049|gb|AAT94290.1| nucleolar G-protein NOG1 [Toxoplasma gondii] Length = 719 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 9/159 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ SV+ A + + FTT +G Y + + D PGI+ + Sbjct: 176 LTGYPNVGKSSFINSVSNANVDVQPFAFTTKSLFVGHFDFLYNRWQIIDTPGILDHPLDE 235 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL---RKKIEIVGLSQ 280 + + L T TH+ +V L+ + + Y I ++S + S L + K +V L++ Sbjct: 236 RNLIE-MLAITALTHIQSVVVFMLDISEECGY-TIESQVSLFQSLLVLFKNKPILVVLNK 293 Query: 281 IDTVDSDTLARKKNELATQCGQ---VPF-EFSSITGHGI 315 D V L+ + E+ G+ V F E S++TG G+ Sbjct: 294 TDKVRLANLSPEHQEIIRTMGKDRTVEFVEASTLTGAGV 332 >gi|68011323|ref|XP_671092.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56486953|emb|CAI03931.1| hypothetical protein PB301445.00.0 [Plasmodium berghei] Length = 171 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 82/151 (54%), Gaps = 7/151 (4%) Query: 3 FLDEAKVYIRSGDGGAG---GISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDF 59 F D + ++ G+GG G +F ++K ++ G GG+GGD+++ ++ ++ Sbjct: 25 FHDRCIINVKGGNGGDGICCFTTFSQKKNKKYASG--GRGGKGGDIYLIGDKKIDNFLNL 82 Query: 60 RYQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAP 119 + + + A +G+KG N+ G G+D + +P+ T ++E++ I + + Q++++A Sbjct: 83 KLKSFYYAGNGKKGCNNNQQGENGKDEYINIPINTIIYEDN--KFINFIHSDYQKVLVAK 140 Query: 120 GGNGGFGNAHFKSSTNQAPYYANPGILGQEK 150 GG GG GN +++ + + PY G +EK Sbjct: 141 GGKGGKGNYSYRTKSLKIPYVCQFGEKTKEK 171 >gi|56421023|ref|YP_148341.1| GTP-binding protein [Geobacillus kaustophilus HTA426] gi|56380865|dbj|BAD76773.1| GTP-binding protein [Geobacillus kaustophilus HTA426] Length = 302 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D P TT G+ + + I D PG+ K Sbjct: 11 VAIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTDDDAQIIFIDTPGVHKPK 70 Query: 221 HQGAGIGDRFLK----HTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K ++L +V+A EE I++ L ++ + + Sbjct: 71 HK---LGDFMMKVALNALREVDLILFMVNA-EEGFGRGEAFIIERLKEVDTPV-----FL 121 Query: 277 GLSQIDTVDSD---TLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + +L VP S++ G+ + ++LE + +++ Sbjct: 122 VINKIDRVHPDELLPLIDRYKDLYPFAEIVP--ISALEGNNVDRLLEQIKERL 172 >gi|289622404|emb|CBI51026.1| unnamed protein product [Sordaria macrospora] Length = 385 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST ++T+ A++P+ T+ P V E Y Sbjct: 24 GIVGLANVGKSTLFQAITKCNLGNPANFPYATIDPEEARVIVPDERFDWLCEKYNPKSRV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+ + A GAG+G+ FL H + +V A ++ Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRAFDD 128 >gi|238881000|gb|EEQ44638.1| nucleolar GTP-binding protein 1 [Candida albicans WO-1] Length = 640 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 15/182 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL +T+A ++ Y FTT +G Y F D PGI+ + Sbjct: 172 ICGYPNVGKSSFLKCITKADVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDRPTEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + + H+ S + + + QC I ++ ++S K +V Sbjct: 232 MNNIE-----MQSIYAIAHLRSCVLYFMDLSEQCGFSIEAQVKLFHSIKPLFANKSVMVV 286 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGH---GIPQILECLHDKIFSIRGEN 333 +++ D + ++ L+ +K EL VP E + H + Q+ +K+ + R E Sbjct: 287 MNKSDIIQAEDLSEEKQELLKTLTTVPGVEIMHASCHEEENVMQVRNQACEKLLTARIEQ 346 Query: 334 EF 335 + Sbjct: 347 KL 348 >gi|221486860|gb|EEE25106.1| nucleolar GTP-binding protein NGB, putative [Toxoplasma gondii GT1] Length = 719 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 9/159 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ SV+ A + + FTT +G Y + + D PGI+ + Sbjct: 176 LTGYPNVGKSSFINSVSNANVDVQPFAFTTKSLFVGHFDFLYNRWQIIDTPGILDHPLDE 235 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL---RKKIEIVGLSQ 280 + + L T TH+ +V L+ + + Y I ++S + S L + K +V L++ Sbjct: 236 RNLIE-MLAITALTHIQSVVVFMLDISEECGY-TIESQVSLFQSLLVLFKNKPILVVLNK 293 Query: 281 IDTVDSDTLARKKNELATQCGQ---VPF-EFSSITGHGI 315 D V L+ + E+ G+ V F E S++TG G+ Sbjct: 294 TDKVRLANLSPEHQEIIRTMGKDRTVEFVEASTLTGAGV 332 >gi|254582895|ref|XP_002499179.1| ZYRO0E05720p [Zygosaccharomyces rouxii] gi|238942753|emb|CAR30924.1| ZYRO0E05720p [Zygosaccharomyces rouxii] Length = 404 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 18/87 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYP----------NLGIVKEGYKE---- 207 GI+GL N GKSTF +VT +K A+YPF T+ P L + + Y+ Sbjct: 19 GIVGLANVGKSTFFQAVTDSKLGNPANYPFATIKPEEAKVQIPSNRLSHLAKLYQSAKCV 78 Query: 208 ---FILADIPGIIKNAHQGAGIGDRFL 231 + DI G+I+ A G G+G FL Sbjct: 79 PATLTMYDIAGLIRGASSGEGLGSAFL 105 >gi|197106326|ref|YP_002131703.1| predicted GTPase, probable translation factor [Phenylobacterium zucineum HLK1] gi|196479746|gb|ACG79274.1| predicted GTPase, probable translation factor [Phenylobacterium zucineum HLK1] Length = 365 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 18/90 (20%) Query: 162 IGIIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVKE------------GYKEF 208 + I+GLPN GKST F A A + A+YPF T+ PN+G V KE Sbjct: 5 VAIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGDVAVPEPRLEALAKIIPSKEI 64 Query: 209 ILA-----DIPGIIKNAHQGAGIGDRFLKH 233 I A D+ G+++ A +G G+G++FL + Sbjct: 65 IPARINFVDVAGLVRGASKGEGLGNQFLAN 94 >gi|295690017|ref|YP_003593710.1| GTP-binding protein Era [Caulobacter segnis ATCC 21756] gi|295431920|gb|ADG11092.1| GTP-binding protein Era [Caulobacter segnis ATCC 21756] Length = 316 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 72/173 (41%), Gaps = 29/173 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 IIG PNAGKST + + AK I TT +P G+ G + +L D PGI Sbjct: 14 AIIGAPNAGKSTLVNRMVGAKVSIVTQKVQTTRFPVRGVAIAGDTQIVLVDTPGIFSPRR 73 Query: 222 QGAGIGDRFLKH-----TERTHVLLHIVSALEENVQAA-------------YQCILDELS 263 + DR + +E +H+V E A Q I++ L Sbjct: 74 R----LDRAMVRAAWAGSEEAEATVHLVDVQAELASRADKATPGEYRSAQDVQTIIEGLK 129 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDT-LARKKNELATQCGQVPFEFSSITGHGI 315 A + ++ I+ L++ID + DT LA K+ T F S+ TG G+ Sbjct: 130 AADRKV-----ILALNKIDGIKRDTLLAIAKDFFDTGVYTDVFMISAQTGAGV 177 >gi|209885224|ref|YP_002289081.1| GTP-binding proten HflX [Oligotropha carboxidovorans OM5] gi|209873420|gb|ACI93216.1| GTP-binding proten HflX [Oligotropha carboxidovorans OM5] Length = 437 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 28/185 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFI------LADI 213 + ++G NAGKST +TRA + AD F TL P L ++ G K I ++D+ Sbjct: 206 VALVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALRLPHGGKAMISDTVGFISDL 265 Query: 214 PGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQ---CILDELSAYNSELR 270 P ++ A + L+ V+LH+ E+ +A + +L +L Sbjct: 266 PTMLVAAFRAT------LEEVIEADVILHVRDISHEDAEAQERDVDHVLRQLGIGTESGH 319 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP-----FEFSSITGHGIPQILECLHDK 325 + IE+ ++ID + ++ LA + P F S+ TG GI +L + ++ Sbjct: 320 RIIEV--WNKIDCFSPE----ERENLARIAARRPADHPCFLVSAETGEGIDALLAAIEER 373 Query: 326 IFSIR 330 + ++R Sbjct: 374 LAALR 378 >gi|325181195|emb|CCA15609.1| GTPase putative [Albugo laibachii Nc14] gi|325181873|emb|CCA16328.1| GTPase putative [Albugo laibachii Nc14] Length = 377 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 45/88 (51%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKST L+ +T + + + FTTL G + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSTLLSQLTETESETSAVEFTTLTCIPGNLIYNDVRIQLLDLPGIIEGAA 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEE 249 G G G + + ++L ++ A +E Sbjct: 125 HGKGRGREVIAVAKSADMILMVLDAGQE 152 >gi|163782118|ref|ZP_02177117.1| GTP binding protein Era [Hydrogenivirga sp. 128-5-R1-1] gi|159882650|gb|EDP76155.1| GTP binding protein Era [Hydrogenivirga sp. 128-5-R1-1] Length = 431 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 20/166 (12%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKS+ + R K + D P T + G KEF+L D G++ ++ Sbjct: 5 VVIIGRPNVGKSSLFNRIVGRRKAIVEDIPGVTRDSVESKAEWGGKEFLLVDTGGLVPDS 64 Query: 221 HQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 H G+ + ER+ V+L +VS V+ + +E++ K+ +V Sbjct: 65 HDEILEGVRKTIEREVERSDVILFVVS-----VKDGVTPLDEEIARLLYPFGDKVILV-- 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQV----PFEFSSITGHGIPQILE 320 ++ VD+D + E+ ++ Q+ F SS+ G G+ ++L+ Sbjct: 118 --VNKVDTD----RDEEVVSEFYQLGFRHVFPVSSVHGRGVGELLD 157 >gi|127512226|ref|YP_001093423.1| GTP-binding protein EngA [Shewanella loihica PV-4] gi|166225856|sp|A3QCG6|DER_SHELP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|126637521|gb|ABO23164.1| small GTP-binding protein [Shewanella loihica PV-4] Length = 489 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +ADYP T G EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L + A + AA + I + L R+K Sbjct: 60 IDGTEEGIETRMAEQSLAAIEEADVVLFLTDA-RAGLTAADEAIAEHLRR-----REKTT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V +++D +D+D+ A G+V ++ ++ G G+ ++E Sbjct: 114 FVVANKVDGIDADSAC--GEFWALGLGEV-YQMAAAQGRGVTNMIE 156 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 38/172 (22%), Positives = 75/172 (43%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E+++ D G+ + + Sbjct: 202 LAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYIPLERDGQEYVIIDTAGVRRRS 261 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK E +V+L +V A E + + L+ + ++ Sbjct: 262 KVHETVEKFSVIKTLKAVEDANVVLLVVDAREGIAEQDLGLLGFALNV------GRALVI 315 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D D R K+EL + G + F S++ G G+ + E + + Sbjct: 316 AVNKWDGIDQDVKERVKSELDRRLGFIDFARIHFISALHGTGVGHLFESVEE 367 >gi|322505637|emb|CAM40744.2| putative nucleolar GTP-binding protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 652 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 15/181 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA ++ Y FTT +G Y + + D PGI+ ++ Sbjct: 174 VTGFPNVGKSSFMNKVTRADVEVQPYAFTTKSLFVGHTDYKYTTWQVIDTPGILDHS--- 230 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + +R + + L H+ + + + + QC I ++S +NS K +V Sbjct: 231 --LEERNVIEMQAITALAHLRACILFFMDLSGQCGYSIEQQVSLFNSIGPLFTGKPVVVV 288 Query: 278 LSQIDTVDSDTLARKKNELAT----QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 ++ D D ++ + EL + G S++T G+ + D + + R E Sbjct: 289 FNKCDVCTIDDVSTAEQELIMDAIQEAGAKWITTSTLTDIGVGDLKSVACDVLLAHRSEQ 348 Query: 334 E 334 + Sbjct: 349 K 349 >gi|86749994|ref|YP_486490.1| GTP-binding protein, HSR1-related [Rhodopseudomonas palustris HaA2] gi|86573022|gb|ABD07579.1| GTP-binding protein, HSR1-related [Rhodopseudomonas palustris HaA2] Length = 457 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 7/175 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST +TRA + AD F TL P L + + + +L+D G I N Sbjct: 227 VALVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRALTLPHGGKAMLSDTVGFISNL 286 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR--KKIEIVG 277 Q L+ ++LH+ E+ +A + + L E + +EI Sbjct: 287 PTQLVAAFRATLEEVLEADLILHVRDISHEDAEAQERDVDAVLRQLGVEADGGRILEI-- 344 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIRG 331 ++ID + + +N A + P F S+++G G+ ++L + ++ + R Sbjct: 345 WNKIDRFEPEQREELRNIAARRSEDRPCFMVSAVSGEGVDELLLAIEQRLAAWRS 399 >gi|68478713|ref|XP_716625.1| hypothetical protein CaO19.7384 [Candida albicans SC5314] gi|46438297|gb|EAK97630.1| hypothetical protein CaO19.7384 [Candida albicans SC5314] Length = 640 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 15/182 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL +T+A ++ Y FTT +G Y F D PGI+ + Sbjct: 172 ICGYPNVGKSSFLKCITKADVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDRPTEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + + H+ S + + + QC I ++ ++S K +V Sbjct: 232 MNNIE-----MQSIYAIAHLRSCVLYFMDLSEQCGFSIEAQVKLFHSIKPLFANKSVMVV 286 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGH---GIPQILECLHDKIFSIRGEN 333 +++ D + ++ L+ +K EL VP E + H + Q+ +K+ + R E Sbjct: 287 MNKSDIIQAEDLSEEKQELLKTLTTVPGVEIMHASCHEEENVMQVRNQACEKLLTARIEQ 346 Query: 334 EF 335 + Sbjct: 347 KL 348 >gi|328863560|gb|EGG12659.1| hypothetical protein MELLADRAFT_41455 [Melampsora larici-populina 98AG31] Length = 395 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGYKEF------------ 208 IGI+G+PN GKS+ + + K A++P+ T+ P V + F Sbjct: 23 IGIVGMPNVGKSSLFNVIAKCDLGKSANFPYATIDPEEARVPVPDQRFDWLCSVYKPANK 82 Query: 209 -----ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+ A GAG+G+ FL H + +V A ++ Sbjct: 83 IPAFLTCIDIAGLTAGASTGAGLGNAFLSHVRAVDGIFQVVRAFDD 128 >gi|160933320|ref|ZP_02080708.1| hypothetical protein CLOLEP_02165 [Clostridium leptum DSM 753] gi|156867197|gb|EDO60569.1| hypothetical protein CLOLEP_02165 [Clostridium leptum DSM 753] Length = 305 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 30/170 (17%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 A I I+G PN GKS+ L ++ K I + P TT G++ + + I D PG+ Sbjct: 10 AFIAIVGRPNVGKSSLLNAMLGQKVAIVSSKPQTTRTRITGVLTQRETQLIFIDTPGL-- 67 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL-----DELSAYNSELRKKI 273 H RT + ++V ++ E+V C+L E++ + EL KK Sbjct: 68 --------------HKPRTRLGDYMVRSVTESVAGVDSCMLVAEAGKEIAPADLELMKKF 113 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQV--PFEFSSI------TGHGI 315 + + L + ++ L K+ L Q + F+F ++ TG G+ Sbjct: 114 KSLSLPAVLAINKIDLLEDKSVLIRQITKFMEQFDFDAVVPVSAQTGDGV 163 >gi|153009537|ref|YP_001370752.1| GTP-binding protein HSR1-like [Ochrobactrum anthropi ATCC 49188] gi|151561425|gb|ABS14923.1| GTP-binding protein HSR1-related [Ochrobactrum anthropi ATCC 49188] Length = 472 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 10/172 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 235 VALVGYTNAGKSTLFNRMTGAEVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNL 294 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 H L+ ++LH+ +S + QA + IL L + ++ +EI Sbjct: 295 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVESILSGLGIEPQDRKRVVEI- 353 Query: 277 GLSQIDTVDSD--TLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A + ++ G+ P S+ITG G+ ++L + +I Sbjct: 354 -WNKIDNLDESGREAALRLAAAGSEEGR-PIPLSAITGEGVDRLLSLIETRI 403 >gi|70954038|ref|XP_746085.1| GTP-binding protein [Plasmodium chabaudi chabaudi] gi|56526596|emb|CAH81684.1| GTP-binding protein, putative [Plasmodium chabaudi chabaudi] Length = 602 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG----IVKEGYKEFILADIPGII 217 I IIG N GKS+ L S+T +K KIA Y FTT NLG + ++ + D+PG+I Sbjct: 422 ISIIGCTNVGKSSILNSITNSKSKIASYNFTTKEFNLGHYSFVNEDDIFTAQIMDLPGLI 481 Query: 218 KNAHQGAGIGDRF 230 + I ++ Sbjct: 482 NRQEEKRNIMEKL 494 >gi|154344076|ref|XP_001567982.1| nucleolar GTP-binding protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 652 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 15/181 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA ++ Y FTT +G Y + + D PGI+ ++ Sbjct: 174 VTGFPNVGKSSFMNKVTRADVEVQPYAFTTKSLFVGHTDYKYTTWQVIDTPGILDHS--- 230 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + +R + + L H+ + + + + QC I ++S +NS K +V Sbjct: 231 --LEERNVIEMQAITALAHLRACILFFMDLSGQCGYSIEQQVSLFNSIGPLFTGKPVVVV 288 Query: 278 LSQIDTVDSDTLARKKNELAT----QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 ++ D D ++ + EL + G S++T G+ + D + + R E Sbjct: 289 FNKCDVCTIDDVSTAEQELIMDAIQEAGAKWITTSTLTDIGVGDLKSVACDVLLAHRSEQ 348 Query: 334 E 334 + Sbjct: 349 K 349 >gi|171780162|ref|ZP_02921066.1| hypothetical protein STRINF_01950 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281510|gb|EDT46945.1| hypothetical protein STRINF_01950 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 298 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 7 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDTEQIVFIDTPGIHK-- 64 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A N + I+ Sbjct: 65 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEKRGKGDDMIIERLKAANIPV-----IL 117 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ + ++L L D + Sbjct: 118 VINKIDKVHPDQLLEQIDDFRSQMDFKEIVP--ISALQGNNVEKLLNILKDNL 168 >gi|134299122|ref|YP_001112618.1| HSR1-like GTP-binding protein [Desulfotomaculum reducens MI-1] gi|134051822|gb|ABO49793.1| GTP-binding protein, HSR1-related protein [Desulfotomaculum reducens MI-1] Length = 421 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 29/172 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST L S+T A + D F TL P I +L D G I+N Sbjct: 204 VSLVGYTNAGKSTLLKSLTGADILVEDKLFATLDPTTRRISLPNNDNVLLTDTVGFIQNL 263 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKIEIV 276 H L+ + + +LLHIV A N + A + +L+ L + K I+ Sbjct: 264 PHHLVAAFRATLEEVQESDLLLHIVDASHPNYEGQIRAVETVLESLHVLD-----KPSIM 318 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE------FSSITGHGIPQILECL 322 ++ID V ++PF S+ +G G Q+L+ + Sbjct: 319 VFNKIDMVKD-------------VQEIPFTENPRVYISATSGEGSDQLLDMI 357 >gi|319898998|ref|YP_004159091.1| GTP-binding protein HflX [Bartonella clarridgeiae 73] gi|319402962|emb|CBI76513.1| GTP-binding protein HflX [Bartonella clarridgeiae 73] Length = 444 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 6/178 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 I ++G NAGKST ++ + D F TL P L IV ++ +L+D G I N Sbjct: 221 IALVGYTNAGKSTLFNHLSDSNVLAEDMLFATLDPTLRKIVLPHGQKVLLSDTVGFISNL 280 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 H A L+ ++LH+ + + A Q +L LS+ ++ IV + Sbjct: 281 PTHLIAAFRAT-LEEVIEADLILHVRDVSDPDHYAHAQDVLKILSSLGVDINDMDHIVEI 339 Query: 279 -SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 ++ID +D L + + + S++TG G+ Q+L + KIF EF Sbjct: 340 WNKIDVLDQHALGILQTN-SKKLLNPALMMSALTGKGLKQLLALIEKKIFGDMQSVEF 396 >gi|239831858|ref|ZP_04680187.1| GTP-binding proten HflX [Ochrobactrum intermedium LMG 3301] gi|239824125|gb|EEQ95693.1| GTP-binding proten HflX [Ochrobactrum intermedium LMG 3301] Length = 472 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 10/172 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 235 VALVGYTNAGKSTLFNRMTGAEVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNL 294 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 H L+ ++LH+ +S + QA + IL L + ++ +EI Sbjct: 295 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVESILAGLGIEPQDRKRVVEI- 353 Query: 277 GLSQIDTVDSD--TLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A + ++ G+ P S+ITG G+ ++L + +I Sbjct: 354 -WNKIDNLDESGREAALRLAAAGSEEGR-PIPLSAITGEGVDRLLSLIETRI 403 >gi|18314205|ref|NP_560872.1| hypothetical protein PAE3626 [Pyrobaculum aerophilum str. IM2] gi|18161798|gb|AAL65054.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2] Length = 346 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 35/56 (62%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I + G PN GKS+F+ V+ AKP++A+YPFTT +LG + + D PG++ Sbjct: 171 IVVAGAPNVGKSSFVRCVSTAKPEVAEYPFTTKQIHLGHIFLRGDRVQVIDTPGLL 226 >gi|20093443|ref|NP_613290.1| GTPase [Methanopyrus kandleri AV19] gi|19886262|gb|AAM01220.1| Predicted GTPase [Methanopyrus kandleri AV19] Length = 352 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 5/76 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + + G PN GK+T + +T ++P+IA YPFTT +G ++ Y +L D PG+++ Sbjct: 177 VTLAGFPNVGKTTLMTVLTGSRPEIAPYPFTTKGIQVGYMERPYPVQML-DTPGLLERPE 235 Query: 222 QGAGIGDR----FLKH 233 + +R LKH Sbjct: 236 EERNPVERQAIAALKH 251 >gi|330822063|ref|XP_003291620.1| hypothetical protein DICPUDRAFT_39284 [Dictyostelium purpureum] gi|325078185|gb|EGC31850.1| hypothetical protein DICPUDRAFT_39284 [Dictyostelium purpureum] Length = 398 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 16/151 (10%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 +I +IG PNAGKST + ++ K ++ TT LG+ EG + + D PG+IKN Sbjct: 94 NIAVIGAPNAGKSTLVNAIVGEKVCAVSHIEHTTRDAILGVYTEGDTQLLFNDTPGMIKN 153 Query: 220 AHQGAGIGDRFLK----HTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 ++ + + F+ + + ++L +V A N Q + I++ L EL KK ++ Sbjct: 154 FNKNTNVRE-FVNLAWTTVKESDLVLMVVDATNNN-QPDTKYIINHLEDQMIELLKKAKL 211 Query: 276 VGLSQ---------IDTVDSDTLARKKNELA 297 + I ++ L RKK +L Sbjct: 212 EDIENGEIEDEKDFILVINKVDLVRKKEDLV 242 >gi|256832767|ref|YP_003161494.1| GTP-binding protein Era [Jonesia denitrificans DSM 20603] gi|256686298|gb|ACV09191.1| GTP-binding protein Era [Jonesia denitrificans DSM 20603] Length = 314 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 3/136 (2%) Query: 164 IIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NAH 221 ++G PNAGKST ++ K I A+ P TT + GIV + IL D PG+ + Sbjct: 23 LVGRPNAGKSTLTNALVGQKIAITANKPQTTRHTIRGIVNREDAQLILVDTPGLHRPRTL 82 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQI 281 G + D L V++ + A ++ + + I ++L+ N K I +++ Sbjct: 83 LGERLNDLVLSTLSEVDVVVFCLPA-DQKIGPGDRFIAEQLARLNERRTKTPIIAAVTKA 141 Query: 282 DTVDSDTLARKKNELA 297 D V D LA E+A Sbjct: 142 DVVSRDALASHLLEVA 157 >gi|170291071|ref|YP_001737887.1| small GTP-binding protein [Candidatus Korarchaeum cryptofilum OPF8] gi|170175151|gb|ACB08204.1| small GTP-binding protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 346 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 16/86 (18%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTT--LYPNLGIVKEGYKEFILADIPGIIKNAH 221 I G+PN GKST ++ +T KP+IA YPFTT L G G +F+ D PG++ Sbjct: 172 IAGMPNTGKSTLISKLTTKKPEIAPYPFTTKGLIIGHGETSVGRVQFV--DTPGLL---- 225 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSAL 247 DR L +ER + L ++AL Sbjct: 226 ------DRPL--SERNKMELQAIAAL 243 >gi|300121537|emb|CBK22056.2| unnamed protein product [Blastocystis hominis] Length = 660 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 8/107 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT LG + Y + + D PGI+ + Sbjct: 172 LCGFPNVGKSSFMNKVTRANVDVQPYAFTTKSLFLGHMDYEYIRWQVIDTPGILDHP--- 228 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS 267 I +R + L H+ +++ V + QC I ++LS + S Sbjct: 229 --IEERNTIEMQSITALAHLQASILFFVDLSGQCNYSIDEQLSLFRS 273 >gi|66503830|ref|XP_394275.2| PREDICTED: probable nucleolar GTP-binding protein 1-like isoform 1 [Apis mellifera] Length = 639 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 14/163 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ + Sbjct: 171 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQIIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + +R + + L H+ +A+ + QC + +++ + S K Sbjct: 230 ----LEERNVIEMQAITALAHLRAAVLYFCDISEQCGHSLEEQVKLFESIKPLFANKPLT 285 Query: 276 VGLSQIDTVDSDTLARKKNEL--ATQCGQVP-FEFSSITGHGI 315 V L+++D + + L+ +K + + + VP E S+IT G+ Sbjct: 286 VVLNKVDVLRLEELSTEKQVILKSLEDKDVPLLEMSTITDFGV 328 >gi|169774937|ref|XP_001821936.1| nucleolar GTP-binding protein 1 [Aspergillus oryzae RIB40] gi|83769799|dbj|BAE59934.1| unnamed protein product [Aspergillus oryzae] Length = 655 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL S+T+A + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLRSITKADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC + D++ ++S KI + Sbjct: 232 MNTIE-----MQSITAIAHLRSAVMYFMDFSEQCGYSVADQIKLFHSIRPLFANKIVFLV 286 Query: 278 LSQIDTVDSDTLA---RKKNELATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + L +++ E + G V + S T G+ + DK+ + R Sbjct: 287 VNKIDVRRPEDLEPEYQQEIESILKSGDVEMLQLSCTTTEGVTNVKNAACDKLLAER 343 >gi|159129552|gb|EDP54666.1| nucleolar GTP-binding protein (Nog1), putative [Aspergillus fumigatus A1163] Length = 650 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL S+TRA + Y FTT +G Y F D PGI+ + + Sbjct: 167 ICGYPNVGKSSFLRSITRADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 226 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC + D++ ++S KI + Sbjct: 227 MNTIE-----MQSITAIAHLRSAILYFMDLSEQCGYSVADQIKLFHSIRPLFANKIVFLV 281 Query: 278 LSQIDTVDSDTLARKKNE---LATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + L + E + G V + S T G+ + DK+ + R Sbjct: 282 VNKIDVRRPEDLEPEYQEEIQKILKSGDVEMLQLSCATTEGVTAVKNAACDKLLAER 338 >gi|328462567|gb|EGF34543.1| GTPase CgtA [Lactobacillus rhamnosus MTCC 5462] Length = 48 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 29/41 (70%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP 196 +K++AD+G++G P+ GKST L+ VT+AKPK+ +P Sbjct: 1 MKVLADVGLVGFPSVGKSTLLSVVTQAKPKLLPISLRRSFP 41 >gi|326773664|ref|ZP_08232947.1| GTP-binding protein [Actinomyces viscosus C505] gi|326636894|gb|EGE37797.1| GTP-binding protein [Actinomyces viscosus C505] Length = 565 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 10/163 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 I + I G NAGKS+ + +T A + D F TL P + EG + + L D G Sbjct: 340 IPSVAIAGYTNAGKSSLMNRLTEAGIMVEDALFATLDPTVRRAETSEG-RTYTLTDTVGF 398 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 ++N H+ L+ ++LH+V A + + + LS L E+ Sbjct: 399 VRNLPHELIEAFRSTLEEVAGADLVLHVVDAAHPDPLSQVAAVRTVLSEIPGALDVS-EL 457 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 + L+++D D+ TLA + L + S+ TG GI ++ Sbjct: 458 IVLNKVDLADAVTLAALRTRLPSAVA-----VSARTGEGIEEL 495 >gi|319407328|emb|CBI80971.1| GTP-binding protein hflX [Bartonella sp. 1-1C] Length = 448 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 I ++G NAGKST ++ + D F TL P L IV + +L+D G I N Sbjct: 221 IALVGYTNAGKSTLFNRLSDSNVLAEDMLFATLDPTLRKIVLPHGQTVLLSDTVGFISNL 280 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 H A L+ ++LH+ + + A Q + + LS ++ IV + Sbjct: 281 PTHLIAAFRAT-LEEVIEADLILHVRDVSDPDHYAHAQDVFEILSDLGVDINDTDHIVEI 339 Query: 279 -SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 ++IDT+D L + + + S++TG G+ Q+L + KIF Sbjct: 340 WNKIDTLDQHALGVLQTN-SKKMLNSALMISALTGKGLSQLLALIEKKIF 388 >gi|147920394|ref|YP_685831.1| GTP-binding protein [uncultured methanogenic archaeon RC-I] gi|110621227|emb|CAJ36505.1| conserved GTP-binding protein [uncultured methanogenic archaeon RC-I] Length = 361 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 45/88 (51%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST + +T A+ ++ Y FTTL G ++ + + D+PG++K Sbjct: 63 ATVTLVGFPSVGKSTLINKLTDARSEVGAYEFTTLDVVPGSMEYRDAKIQILDLPGLVKG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSAL 247 A G G G + ++L I+ Sbjct: 123 AAAGKGRGREVISVIRGCDLILMILDVF 150 >gi|55378196|ref|YP_136046.1| GTP-binding protein Drg [Haloarcula marismortui ATCC 43049] gi|55230921|gb|AAV46340.1| GTP-binding protein Drg [Haloarcula marismortui ATCC 43049] Length = 369 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 47/89 (52%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L ++T A+ + Y FTTL G++K + D+PG+I+ Sbjct: 61 ATVALVGFPSVGKSTLLNALTNAESETGAYEFTTLDVYPGMLKHKGANIQILDVPGLIEG 120 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G L +++ ++S E Sbjct: 121 AAGGRGGGKEVLSVVRTADLIVFLISVFE 149 >gi|330955811|gb|EGH56071.1| GTP-binding protein YchF [Pseudomonas syringae Cit 7] Length = 79 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 19/41 (46%), Positives = 28/41 (68%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV 201 + GI+GLPN GKST ++T++ ++PF T+ PN GIV Sbjct: 4 NCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIV 44 >gi|321471616|gb|EFX82588.1| hypothetical protein DAPPUDRAFT_195334 [Daphnia pulex] Length = 633 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ + Sbjct: 174 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLFVGHTDHRYLRWQVVDTPGILDHP--- 230 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 231 --LEDRNTIEMQAIAALAHLRAAILYVMDISEQC 262 >gi|255726074|ref|XP_002547963.1| nucleolar GTP-binding protein 1 [Candida tropicalis MYA-3404] gi|240133887|gb|EER33442.1| nucleolar GTP-binding protein 1 [Candida tropicalis MYA-3404] Length = 640 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 15/182 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL +T+A + Y FTT +G Y F D PGI+ + Sbjct: 172 ICGYPNVGKSSFLRCITKADVDVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDRPTEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + + H+ S + + + QC I ++ ++S K +V Sbjct: 232 MNNIE-----MQSIYAIAHLRSCVLYFMDLSEQCGFSIEAQVKLFHSIKPLFANKSVMVV 286 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGH---GIPQILECLHDKIFSIRGEN 333 +++ D + ++ L+ +K EL VP E + + H + Q+ +K+ + R E Sbjct: 287 MNKSDIIKAENLSEEKQELLKTLTTVPGVEIMNASCHEEENVMQVRNHACEKLLTARIEQ 346 Query: 334 EF 335 + Sbjct: 347 KL 348 >gi|227513295|ref|ZP_03943344.1| GTP-binding protein Era [Lactobacillus buchneri ATCC 11577] gi|227083496|gb|EEI18808.1| GTP-binding protein Era [Lactobacillus buchneri ATCC 11577] Length = 300 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 15/167 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT G+ + + D PGI K Sbjct: 11 VAIVGRPNVGKSTFLNRVVAQKIAIMSDKAQTTRNKIQGVYTTDEAQVVFIDTPGIHKPQ 70 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 ++ G + D L + +L +V+A E A I+D L ++ K I ++ ++ Sbjct: 71 NKLGDFMMDSALSALKEVDAVLFMVNATERR-GAGDNFIIDRL----KDVHKPIYLL-IN 124 Query: 280 QIDTVDSD----TLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 +ID + D + + KN L+ + F S++ G+ +P++L L Sbjct: 125 KIDEITPDDVMAIIEQYKNALSFKEV---FPISALQGNNVPELLTSL 168 >gi|307102902|gb|EFN51168.1| hypothetical protein CHLNCDRAFT_55283 [Chlorella variabilis] Length = 605 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 13/97 (13%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA ++ Y FTT +G Y + + D PGI+ Sbjct: 173 VCGYPNVGKSSFMNKVTRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGIL------ 226 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD 260 DR L+ ER + + ++AL +++AA +LD Sbjct: 227 ----DRPLE--ERNTIEMQSITAL-AHLRAAVLYVLD 256 >gi|251792370|ref|YP_003007096.1| transcriptional regulatory protein TyrR [Aggregatibacter aphrophilus NJ8700] gi|247533763|gb|ACS97009.1| transcriptional regulatory protein TyrR [Aggregatibacter aphrophilus NJ8700] Length = 423 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 7/112 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L + + ILAD G + Sbjct: 188 IPTISLVGYTNAGKSTLFNLITDANVYAADQLFATLDPTLRRLTLQDVGTTILADTVGFL 247 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSA 264 ++ H L+ T +LLH++ + EN++A Q +L+E+ A Sbjct: 248 RDLPHDLISAFKSTLQETTEASLLLHMIDCADNRKLENIEAVNQ-VLEEIGA 298 >gi|320586171|gb|EFW98850.1| GTP-binding protein [Grosmannia clavigera kw1407] Length = 393 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST ++T++ A++P+ T+ P V E Y+ Sbjct: 23 GIVGLANVGKSTLFQAITKSNLGNPANFPYATIDPEEARVIVPDARFDWLCEKYQPKSRV 82 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+ + A GAG+G+ FL H + +V ++ Sbjct: 83 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDD 127 >gi|307106708|gb|EFN54953.1| hypothetical protein CHLNCDRAFT_134713 [Chlorella variabilis] Length = 396 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 18/105 (17%) Query: 123 GGFGNAHFKSSTNQAPYYANPGI-LGQEKIIWLKLKLIADIGIIGLPNAGKSTFLA---- 177 GG H +A + G+ +GQ++++ +G++G+PNAGKST + Sbjct: 72 GGGAELHRHEQLLEAAEGTDEGVPVGQQRLL--------QVGVMGVPNAGKSTLVNVLAG 123 Query: 178 -SVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 V+ PK TT P LG EG + +L D PG++ H Sbjct: 124 FKVSAVSPKTN----TTERPRLGAFTEGPSQVVLYDTPGVVDKLH 164 >gi|284166812|ref|YP_003405091.1| GTP-binding protein HSR1-related protein [Haloterrigena turkmenica DSM 5511] gi|284016467|gb|ADB62418.1| GTP-binding protein HSR1-related protein [Haloterrigena turkmenica DSM 5511] Length = 329 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 15/133 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ VT A+ + A YPFTT LG + + + L D PG++ Sbjct: 160 IVVAGYPNVGKSSFVNDVTSARGETASYPFTTKGIGLGHFEHEHLRYQLVDTPGLL---- 215 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG--LS 279 DR ER + VSA+ E++ ++D L ++E+ ++ Sbjct: 216 ------DR--PPAERNEIESQAVSAI-EHLADCMLVMIDPSGECGYPLESQLELRDSIVA 266 Query: 280 QIDTVDSDTLARK 292 Q D+V T+A K Sbjct: 267 QFDSVPVLTIANK 279 >gi|325982761|ref|YP_004295163.1| GTP-binding proten HflX [Nitrosomonas sp. AL212] gi|325532280|gb|ADZ27001.1| GTP-binding proten HflX [Nitrosomonas sp. AL212] Length = 390 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 9/170 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFILADIPGIIKN 219 + I+G NAGKSTF +TRA+ AD F TL ++EG +++D G I+ Sbjct: 199 VSIVGYTNAGKSTFFNKLTRAQSYAADQLFATLDTTTRKLFIEEG-STVVISDTVGFIRE 257 Query: 220 A-HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 H L+ T + +LLH++ A N + + L +++ +I I Sbjct: 258 LPHTLIAAFRATLEETVQADLLLHVIDASNSNSDEQIKEVNKILKEIGADVIPQILI--F 315 Query: 279 SQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHDKIF 327 ++ID +D+ TL R + + G++ S+ TG G+ + + L + I Sbjct: 316 NKIDLIDA-TL-RSAGCVRDEYGRISRIRLSAETGEGVEFVRQALTETIL 363 >gi|313127051|ref|YP_004037321.1| small GTP-binding protein domain [Halogeometricum borinquense DSM 11551] gi|312293416|gb|ADQ67876.1| small GTP-binding protein domain [Halogeometricum borinquense DSM 11551] Length = 370 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 5/109 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G P+ GKST + ++T A ++ Y FTTL N G++ + D+PG+I+ A Sbjct: 63 VALVGFPSVGKSTLINALTNADSEVGAYEFTTLNVNPGMLHYNGANIQILDVPGLIEGAA 122 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR 270 G G G L +++ ++S E Y+ + +EL Y +++R Sbjct: 123 GGRGGGKEVLSVVRTADLVVFMLSVFE---LERYERLQEEL--YQNKIR 166 >gi|124505425|ref|XP_001351454.1| GTP binding protein, putative [Plasmodium falciparum 3D7] gi|23498212|emb|CAD49183.1| GTP binding protein, putative [Plasmodium falciparum 3D7] Length = 631 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI----LADIPGII 217 I IIG N GKS+ L S+T +K K+A+Y FTT NLG I + D+PG+I Sbjct: 450 ISIIGCTNVGKSSLLNSITNSKSKVANYNFTTKELNLGHYSFANDNDIFTTQIMDLPGLI 509 Query: 218 KNAHQGAGIGDRF 230 I ++ Sbjct: 510 DRPEDKRNIMEKL 522 >gi|163942056|ref|YP_001646940.1| GTP-binding protein Era [Bacillus weihenstephanensis KBAB4] gi|163864253|gb|ABY45312.1| GTP-binding protein Era [Bacillus weihenstephanensis KBAB4] Length = 301 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 8/92 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL + K I +D P TT G+ E + + D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVVFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALE 248 H+ +GD +K + T ++L +V+A E Sbjct: 71 HK---LGDFMVKMAQTTLKEVDIVLFMVNATE 99 >gi|319404324|emb|CBI77919.1| GTP-binding protein HflX [Bartonella rochalimae ATCC BAA-1498] Length = 448 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 I ++G NAGKST ++ + D F TL P L IV + +L+D G I N Sbjct: 221 IALVGYTNAGKSTLFNHLSDSNVLAEDMLFATLDPTLRKIVLPHGQTVLLSDTVGFISNL 280 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 H A L+ ++LH+ + + A Q + + LS ++ IV + Sbjct: 281 PTHLIAAFRAT-LEEVIEADLILHVRDVSDPDHYAHAQDVFEILSDLGVDINDTDHIVEI 339 Query: 279 -SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 ++IDT+D L + + + S++TG G+ Q+L + KIF Sbjct: 340 WNKIDTLDQHALGVLQTN-SKKMLNSALMISALTGKGLSQLLALIEKKIF 388 >gi|294501286|ref|YP_003564986.1| GTP-binding protein Era [Bacillus megaterium QM B1551] gi|295706633|ref|YP_003599708.1| GTP-binding protein Era [Bacillus megaterium DSM 319] gi|294351223|gb|ADE71552.1| GTP-binding protein Era [Bacillus megaterium QM B1551] gi|294804292|gb|ADF41358.1| GTP-binding protein Era [Bacillus megaterium DSM 319] Length = 301 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 8/92 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D P TT G+ E + + D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTEDQAQIVFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALE 248 H+ +GD +K + T ++L +++A E Sbjct: 71 HK---LGDFMMKVAQNTLKEVDLILFMINATE 99 >gi|225683746|gb|EEH22030.1| GTP-binding protein [Paracoccidioides brasiliensis Pb03] gi|226293111|gb|EEH48531.1| GTP-binding protein [Paracoccidioides brasiliensis Pb18] Length = 431 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 41/126 (32%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA---------------DYPFTTL------------ 194 IG++G P++GKST L S+T A K+ + FTT+ Sbjct: 7 IGLVGKPSSGKSTTLNSLTDASSKVGMFTILPVFYKPMLNETFLFTTIDPQRAIGYLQVD 66 Query: 195 ------------YPNLGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 PN G EG + L D+ G++ AH+G G+G++FL L Sbjct: 67 CACKRYNLSDICKPNYGGCHEGRRSVPIELLDVAGLVPGAHEGKGLGNKFLDDLRHADAL 126 Query: 241 LHIVSA 246 +H+V Sbjct: 127 IHVVDV 132 >gi|146415172|ref|XP_001483556.1| hypothetical protein PGUG_04285 [Meyerozyma guilliermondii ATCC 6260] Length = 400 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 22/102 (21%) Query: 163 GIIGLPNAGKSTFLASVTRA---KPKIADYPFTTLYPNLGIV-----------------K 202 G++GL N GKSTF ++TR P A+YPF T+ V K Sbjct: 37 GVVGLANVGKSTFFQAITRTLLGNP--ANYPFATIDTEESQVVVKSPILDHYLQLFQSQK 94 Query: 203 EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + + DI G+ ++A G G+G++FL + H+V Sbjct: 95 KISSTLTIYDIAGLTRDASSGKGMGNKFLSEIRLVDGIFHMV 136 >gi|114569999|ref|YP_756679.1| small GTP-binding protein [Maricaulis maris MCS10] gi|114340461|gb|ABI65741.1| GTP-binding protein HflX [Maricaulis maris MCS10] Length = 450 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 10/180 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + ++G NAGKST +T A D PF TL P + V G +L+D G I + Sbjct: 203 VALVGYTNAGKSTLFNKLTGAGVFAQDMPFATLDPTVRAVDLPGGTRILLSDTVGFITDL 262 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIV 276 R L+ +L+HI+ A + + + Q +LD + A + + +E Sbjct: 263 PTELIAAFRATLEEVREADLLVHIIDASDPDREGRIQDVESVLDAIEAGPAHDQAMLEAW 322 Query: 277 GLS-QIDTVDSDTLARKKNELATQCGQ-VPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 S ++D ++ LA + G+ V S++TG G+ +++ + + S ENE Sbjct: 323 NKSDRLDDESTEDLAITIQMANLKAGKPVKLAVSAVTGQGVDSLIDAIERTLSS---ENE 379 >gi|324519561|gb|ADY47415.1| Developmentally-regulated GTP-binding protein 1 [Ascaris suum] Length = 366 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 46/89 (51%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A +G G P+ GKST + ++ ++A Y F TL G+++ + L D+PGII+ Sbjct: 63 ARVGFGGFPSVGKSTLVCNLAGVYSEVAAYEFPTLTTVPGVIRYKGAKIQLLDLPGIIEG 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 A G G G + + ++L ++ ++ Sbjct: 123 AKDGKGRGRQVIAVARTCSLILMVLDVMK 151 >gi|297527494|ref|YP_003669518.1| small GTP-binding protein [Staphylothermus hellenicus DSM 12710] gi|297256410|gb|ADI32619.1| small GTP-binding protein [Staphylothermus hellenicus DSM 12710] Length = 354 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGII 217 I G+P GKST L +T AKP+I+ +PFTT G I E Y + L D PG++ Sbjct: 181 IAGMPQVGKSTLLKKLTHAKPEISPFPFTTKTIIAGHITVEPYGKITLIDTPGLL 235 >gi|291296070|ref|YP_003507468.1| GTP-binding proten HflX [Meiothermus ruber DSM 1279] gi|290471029|gb|ADD28448.1| GTP-binding proten HflX [Meiothermus ruber DSM 1279] Length = 560 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 21/174 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK----EFILADIPGII 217 +G++G NAGK+T + ++ + + + F TL P + + G+ E + D G I Sbjct: 378 VGVVGYTNAGKTTLMHALAKKGDEGENKLFATLRP---LTRRGFLPGIGEVLFTDTVGFI 434 Query: 218 KNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 + H + + F L+ VLLH++ A +E YQ + D L+ E + Sbjct: 435 R--HMPGDLLEAFRSTLEELRDADVLLHVLDASQEGALERYQVVEDLLAELGVE---SPQ 489 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 ++ LS+ D D L + L F S++ G G+ ++ + + + + + Sbjct: 490 VLVLSKADAADGYDLEFLRERLGG------FPVSAVRGQGLGELKQAVAEALLA 537 >gi|154706483|ref|YP_001424421.1| GTP-binding protein [Coxiella burnetii Dugway 5J108-111] gi|165918612|ref|ZP_02218698.1| GTP-binding proten HflX [Coxiella burnetii RSA 334] gi|154355769|gb|ABS77231.1| GTP-binding protein [Coxiella burnetii Dugway 5J108-111] gi|165917740|gb|EDR36344.1| GTP-binding proten HflX [Coxiella burnetii RSA 334] Length = 454 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 33/187 (17%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST ++T A AD F TL P ++ + IL D G I Sbjct: 203 VPTVSLVGYTNAGKSTLFNAITEANVYTADQLFATLDPTFRQLELPTLGKIILVDTVGFI 262 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIV-------SALEENVQAAYQCI----LDELSAY 265 ++ H L+ + + +LLH+V S + E VQ + I + +L Y Sbjct: 263 RDLPHDLIAAFRATLEESRQADLLLHVVDAHSPDSSVMLEEVQKVLETIGAEEVPQLFIY 322 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI----PQILEC 321 N KI+++ S+ +D D + + S++TG GI P I+E Sbjct: 323 N-----KIDLLE-SRKPRIDYDEKGKPRR----------VWLSALTGVGIDLLNPAIVEL 366 Query: 322 LHDKIFS 328 L D I + Sbjct: 367 LGDTILT 373 >gi|90022311|ref|YP_528138.1| putative GTP-binding protein [Saccharophagus degradans 2-40] gi|89951911|gb|ABD81926.1| Small GTP-binding protein domain [Saccharophagus degradans 2-40] Length = 441 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 27/176 (15%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF---ILADIPG 215 I + ++G NAGKST ++T A D F TL P + + G ++ ILAD G Sbjct: 198 IPTLSLVGYTNAGKSTLFNAITDAGVYAEDKLFATLDPTMRRI--GLRDVGPAILADTVG 255 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAYNSE-- 268 I N H+ L+ +LLH+V A ++ N++ + +L+E+ A + Sbjct: 256 FISNLPHRLVEAFRATLEEAASADILLHVVDAADDERARNIEQV-KLVLNEIGAGDLPVL 314 Query: 269 -LRKKIEIVGLSQIDT-VDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + KI++ LS +D +D D L + V S+ +G GI Q++E + Sbjct: 315 MVHNKIDL--LSNVDARIDRDDLGKP----------VAVWLSAQSGAGIEQLMEAI 358 >gi|289578198|ref|YP_003476825.1| GTP-binding proten HflX [Thermoanaerobacter italicus Ab9] gi|289527911|gb|ADD02263.1| GTP-binding proten HflX [Thermoanaerobacter italicus Ab9] Length = 413 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 7/111 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + I+G NAGKST L ++T+A+ + D F TL P ++ +E IL D G I+ Sbjct: 201 VAIVGYTNAGKSTLLNALTKAEVYVEDKLFATLDPTARRLILPSGREVILIDTVGFIRKL 260 Query: 221 -HQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYN 266 H L+ + +LLH++ +EE ++ + +L +L A N Sbjct: 261 PHDLVEAFKSTLEEVKYADLLLHVIDVTSPDMEEKIKVV-ERVLSDLGAIN 310 >gi|307608760|emb|CBW98143.1| hypothetical protein LPW_00091 [Legionella pneumophila 130b] Length = 414 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 5/110 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + ++G NAGKST +T +AD F TL P + ++ G ILAD G I++ Sbjct: 200 VSLVGYTNAGKSTLFNVLTGEHTYVADQLFATLDPTMRKLELPGSSAAILADTVGFIRDL 259 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYN 266 H L+ T++ +LLH++ + N + Q +LD+L N Sbjct: 260 PHHLVEAFRATLEETQQADLLLHVIDISDPNWRETVFEVQKVLDDLKVNN 309 >gi|303243659|ref|ZP_07330000.1| small GTP-binding protein [Methanothermococcus okinawensis IH1] gi|302485901|gb|EFL48824.1| small GTP-binding protein [Methanothermococcus okinawensis IH1] Length = 366 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 37/72 (51%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +G P+ GKST L +T A ++ Y FTTL GI++ + + D PGII Sbjct: 61 ATVAFVGFPSVGKSTLLNKLTNANSEVGAYAFTTLTIIPGILEYRGAKIQVLDAPGIISG 120 Query: 220 AHQGAGIGDRFL 231 A G G G L Sbjct: 121 AAFGKGRGSEVL 132 >gi|153206772|ref|ZP_01945613.1| GTP-binding proten HflX [Coxiella burnetii 'MSU Goat Q177'] gi|212218440|ref|YP_002305227.1| GTP-binding protein [Coxiella burnetii CbuK_Q154] gi|120577135|gb|EAX33759.1| GTP-binding proten HflX [Coxiella burnetii 'MSU Goat Q177'] gi|212012702|gb|ACJ20082.1| GTP-binding protein [Coxiella burnetii CbuK_Q154] Length = 454 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 33/187 (17%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST ++T A AD F TL P ++ + IL D G I Sbjct: 203 VPTVSLVGYTNAGKSTLFNAITEANVYTADQLFATLDPTFRQLELPTLGKIILVDTVGFI 262 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIV-------SALEENVQAAYQCI----LDELSAY 265 ++ H L+ + + +LLH+V S + E VQ + I + +L Y Sbjct: 263 RDLPHDLIAAFRATLEESRQADLLLHVVDPHSPDSSVMLEEVQKVLETIGAEEVPQLFIY 322 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI----PQILEC 321 N KI+++ S+ +D D + + S++TG GI P I+E Sbjct: 323 N-----KIDLLE-SRKPRIDYDEKGKPRR----------VWLSALTGVGIDLLNPAIVEL 366 Query: 322 LHDKIFS 328 L D I + Sbjct: 367 LGDTILT 373 >gi|261334233|emb|CBH17227.1| nucleolar GTP-binding protein 1, putative [Trypanosoma brucei gambiense DAL972] Length = 655 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 15/181 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+F+ VTRA ++ Y FTT +G Y + + D PGI+ ++ Sbjct: 174 ITGFPNVGKSSFMNKVTRADVEVQPYAFTTKSLFVGHTDFKYASWQVIDTPGILDHS--- 230 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + +R + + L H+ + + + + QC I ++S + S K IV Sbjct: 231 --LEERNVIEMQAITALAHLRACILFFMDLSTQCGHSIAQQVSLFKSIGPLFTGKPVIVV 288 Query: 278 LSQIDTVDSDTLARKKNELAT----QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 ++ D D + ++ L +CG S++T G+ + + + + R E Sbjct: 289 FNKSDLCTFDDITAEEQSLVMTAIEECGAKWITTSTLTDAGVGDLKTLACETLLAHRSEQ 348 Query: 334 E 334 + Sbjct: 349 K 349 >gi|149913471|ref|ZP_01902004.1| GTP-binding protein Era [Roseobacter sp. AzwK-3b] gi|149812591|gb|EDM72420.1| GTP-binding protein Era [Roseobacter sp. AzwK-3b] Length = 302 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 7/168 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 8 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGESQLVFVDTPGLFQPR 67 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + + V++ ++ A + + IL+ L + + + ++ Sbjct: 68 RRLDRAMVAAAWGGAADADVIVLLIEA-HRGITEGVERILERLQDVG---KGRTVALAIN 123 Query: 280 QIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECLHDKI 326 +ID V S+ L R +L + F S+ GHG+ + + L +++ Sbjct: 124 KIDRVKSEALLRLTQDLNARFSFAKTFMISAERGHGVEDLRKWLAEQV 171 >gi|291523058|emb|CBK81351.1| ferrous iron transporter FeoB [Coprococcus catus GD/7] Length = 830 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 14/159 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K G+K+ I+ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLK-GHKDVIITDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ +L+IV + LE N+ Q + EL + I+ + Sbjct: 64 YTLEEVVARNYILNEKPDAILNIVDGTNLERNLYLTTQLM---------ELGIPV-IMAI 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQ 317 + +D V + +L+ CG +E S++ G GI + Sbjct: 114 NMMDLVQKNGDNINIQKLSVACGCPVYEISALKGTGIKE 152 >gi|163793043|ref|ZP_02187019.1| GTP-binding protein Era [alpha proteobacterium BAL199] gi|159181689|gb|EDP66201.1| GTP-binding protein Era [alpha proteobacterium BAL199] Length = 308 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 20/174 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + ++G PNAGKST S+ AK I + T + GIV G + IL D PGI K Sbjct: 18 VALVGAPNAGKSTLTNSLVGAKVSIVTHKAQTTRSRIRGIVMAGATQLILVDTPGIFKPR 77 Query: 221 HQGAGIGDRFLKH-----TERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + DR + H +++ + A ++ Q I+D L A + Sbjct: 78 RR----LDRAMVHAAWAGAGDADIIVLVADAARGRIEEDTQRIIDGLKANGQR-----AV 128 Query: 276 VGLSQIDTVDSDTL---ARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + L+++D + + L A+ +E A V F S++TG+G + L +++ Sbjct: 129 LALNKVDGMKRERLLPIAQAYSE-AFDFDSV-FMISALTGNGCDDLTRYLAERM 180 >gi|17369669|sp|Q9U6A9|NOG1_TRYBB RecName: Full=Nucleolar GTP-binding protein 1 gi|6007832|gb|AAF01061.1|AF189284_1 nucleolar G-protein NOG1 [Trypanosoma brucei] Length = 655 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 15/181 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+F+ VTRA ++ Y FTT +G Y + + D PGI+ ++ Sbjct: 174 ITGFPNVGKSSFMNKVTRADVEVQPYAFTTKSLFVGHTDFKYASWQVIDTPGILDHS--- 230 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + +R + + L H+ + + + + QC I ++S + S K IV Sbjct: 231 --LEERNVIEMQAITALAHLRACILFFMDLSTQCGHSIAQQVSLFKSIGPLFTGKPVIVV 288 Query: 278 LSQIDTVDSDTLARKKNELAT----QCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 ++ D D + ++ L +CG S++T G+ + + + + R E Sbjct: 289 FNKSDLCTFDDITAEEQSLVMTAIEECGAKWITTSTLTDAGVGDLKTLACETLLAHRSEQ 348 Query: 334 E 334 + Sbjct: 349 K 349 >gi|134300054|ref|YP_001113550.1| GTP-dependent nucleic acid-binding protein EngD [Desulfotomaculum reducens MI-1] gi|134052754|gb|ABO50725.1| GTP-binding protein YchF [Desulfotomaculum reducens MI-1] Length = 366 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 17/101 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADY--------PFTTLYPNLGI---------VKEGY 205 GIIGLP GK+T +T + +++++ + P+ I K Y Sbjct: 8 GIIGLPMVGKTTIFNLLTNSNQEVSNFLSGKTETITASARVPDKRIDFLVNMYKPRKITY 67 Query: 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 + +++PG+++ A +G G+G++FL +L+H+V A Sbjct: 68 AQIQFSEVPGLVRGASEGKGVGNQFLSAIRNADLLVHVVRA 108 >gi|297171661|gb|ADI22655.1| GTPase [uncultured Gemmatimonadales bacterium HF0500_22O06] Length = 317 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 9/165 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII--K 218 + ++G PN GKST L + I T + + GI+ G + I D PG++ K Sbjct: 22 VTLVGRPNVGKSTLLNQLVGEHLSIVTPKAQTTWQRVTGILSVGTDQMIFLDTPGLLEAK 81 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + Q A +G E +L I S + + + A I + LS N+ L + L Sbjct: 82 DMLQRAMLGAALEALAEADITILLIDSTTKPDSREAASTI-EALSETNAPLH-----IAL 135 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 +++D D + + + + ++ SS+TG G+ +LE L Sbjct: 136 NKVDIADEEAIRAWEAWADRELSGSIYQLSSLTGKGVDALLEGLR 180 >gi|161830086|ref|YP_001596717.1| GTP-binding proten HflX [Coxiella burnetii RSA 331] gi|215919083|ref|NP_820006.2| GTP-binding proten HflX [Coxiella burnetii RSA 493] gi|161761953|gb|ABX77595.1| GTP-binding proten HflX [Coxiella burnetii RSA 331] gi|206583968|gb|AAO90520.2| GTP-binding protein [Coxiella burnetii RSA 493] Length = 454 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 33/187 (17%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST ++T A AD F TL P ++ + IL D G I Sbjct: 203 VPTVSLVGYTNAGKSTLFNAITEANVYTADQLFATLDPTFRQLELPTLGKIILVDTVGFI 262 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIV-------SALEENVQAAYQCI----LDELSAY 265 ++ H L+ + + +LLH+V S + E VQ + I + +L Y Sbjct: 263 RDLPHDLIAAFRATLEESRQADLLLHVVDAHSPDSSVMLEEVQKVLETIGAEEVPQLFIY 322 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI----PQILEC 321 N KI+++ S+ +D D + + S++TG GI P I+E Sbjct: 323 N-----KIDLLE-SRKPRIDYDEKGKPRR----------VWLSALTGVGIDLLNPAIVEL 366 Query: 322 LHDKIFS 328 L D I + Sbjct: 367 LGDTILT 373 >gi|52841177|ref|YP_094976.1| GTP-binding protein Era [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628288|gb|AAU27029.1| GTP-binding protein Era [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 311 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 6/75 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST L + + K I P TT + LGI EG +F+ D PGI Sbjct: 24 IALVGRPNVGKSTLLNRILQQKLSITSRKPQTTRHSILGIRTEGEFQFVYVDTPGI---- 79 Query: 221 HQG-AGIGDRFLKHT 234 HQG A +R + T Sbjct: 80 HQGNAKAINRMMNKT 94 >gi|304391556|ref|ZP_07373498.1| GTP-binding protein HflX [Ahrensia sp. R2A130] gi|303295785|gb|EFL90143.1| GTP-binding protein HflX [Ahrensia sp. R2A130] Length = 455 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 13/172 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST S+T A+ D F TL P L + + IL+D G + + Sbjct: 235 VALVGYTNAGKSTLFNSLTGAEVMAKDMLFATLDPTLRQLHLPQGTQAILSDTVGFVSDL 294 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEI 275 H A L+ ++LH+ + + +A + IL +L + +E+ Sbjct: 295 PTHLVAAF-RATLEEVIEAELILHVRDISDSDTKAQAEDVYTILSQLGVGEDGHSRVVEV 353 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQ-VPFEFSSITGHGIPQILECLHDKI 326 ++ID +D++ L + AT+ G P S++TG G +LE + DK+ Sbjct: 354 --WNKIDLLDAEALEAIR---ATRTGNDAPLLVSAVTGEGEGSLLELVEDKL 400 >gi|77456752|ref|YP_346257.1| GTP-binding protein, HSR1-like [Pseudomonas fluorescens Pf0-1] gi|77380755|gb|ABA72268.1| GTP-binding protein HflX [Pseudomonas fluorescens Pf0-1] Length = 433 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 2/92 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +VT+++ AD F TL P L + + +LAD G I Sbjct: 198 IPTVSLVGYTNAGKSTLFNNVTKSEVYAADQLFATLDPTLRRLDLDDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 ++ H+ L+ + + +LLH++ A E Sbjct: 258 RHLPHKLVEAFRSTLEESSNSDLLLHVIDAAE 289 >gi|15897540|ref|NP_342145.1| GTP-binding protein [Sulfolobus solfataricus P2] gi|284174860|ref|ZP_06388829.1| GTP-binding protein [Sulfolobus solfataricus 98/2] gi|6015849|emb|CAB57676.1| probable GTP-binding protein [Sulfolobus solfataricus P2] gi|13813793|gb|AAK40935.1| GTP-binding protein [Sulfolobus solfataricus P2] gi|261602302|gb|ACX91905.1| small GTP-binding protein [Sulfolobus solfataricus 98/2] Length = 332 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 35/59 (59%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + I + G PN GKST ++ ++ AKP+IA YPFTT ++G V + D PGI+ Sbjct: 156 LPTIVVAGPPNVGKSTLVSKISTAKPEIASYPFTTKEVHVGHVILDDFRIQVIDTPGIL 214 >gi|297544479|ref|YP_003676781.1| GTP-binding proten HflX [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842254|gb|ADH60770.1| GTP-binding proten HflX [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 413 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 7/111 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + I+G NAGKST L ++T+A+ + D F TL P ++ +E IL D G I+ Sbjct: 201 VAIVGYTNAGKSTLLNALTKAEVYVEDKLFATLDPTARRLILPSGREVILIDTVGFIRKL 260 Query: 221 -HQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYN 266 H L+ + +LLH++ +EE ++ + +L +L A N Sbjct: 261 PHDLVEAFKSTLEEVKYADLLLHVIDVTSPDMEEKIKVV-ERVLSDLGAIN 310 >gi|198275294|ref|ZP_03207825.1| hypothetical protein BACPLE_01453 [Bacteroides plebeius DSM 17135] gi|198271877|gb|EDY96147.1| hypothetical protein BACPLE_01453 [Bacteroides plebeius DSM 17135] Length = 394 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 24/173 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN 219 IG+ G NAGKS+ + ++T ++D P TT P ++ G + D G Sbjct: 12 IGLFGKRNAGKSSLINALTHQDTALVSDIPGTTTDPVFKAMEIHGLGPCVFIDTAGFDDE 71 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCI---LDELSAYNSELRKK-IEI 275 +G+ ++ T+R ALE+ A C LDE + L++K + + Sbjct: 72 GE----LGELRIRQTQR---------ALEKTDIALMVCTDEHLDEELHWQRLLKEKNVPV 118 Query: 276 VG-LSQIDTV-DSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + L++ D + D++ R+ + QCGQVP S++TG G+ IL L +K+ Sbjct: 119 IWILNKCDLLSDAEQTMRR---IEHQCGQVPLLVSTLTGKGLDDILRSLRNKL 168 >gi|269115218|ref|YP_003302981.1| GTP-binding Era-like protein [Mycoplasma hominis] gi|268322843|emb|CAX37578.1| GTP-binding protein era homolog [Mycoplasma hominis ATCC 23114] Length = 294 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 10/163 (6%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 +K + ++ +IG PN GKSTFL +V I D P TT GI + + I D P Sbjct: 1 MKKVCNVCLIGRPNVGKSTFLNNVLNFNLSIITDKPQTTKDNIRGIYNDKDYQIIFIDTP 60 Query: 215 GIIKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 GI K + + + + E + V+L + A E + + I+++++ N+E + Sbjct: 61 GIHKAENLLSERLNSKSYEAIENSDVVLFLTPA-NEAIGTGDKFIIEKINETNNENK--- 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIP 316 I +S+ID +++ A KK E + G FE G +P Sbjct: 117 -IAVISKIDLLNTKEEADKKAEELKKLG---FEKVFGIGQNLP 155 >gi|213965802|ref|ZP_03393994.1| GTP-binding protein Era [Corynebacterium amycolatum SK46] gi|213951561|gb|EEB62951.1| GTP-binding protein Era [Corynebacterium amycolatum SK46] Length = 319 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 20/174 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST S+ K I A+ P TT +P G+V + ++ D PG+ K Sbjct: 31 VSIVGRPNTGKSTLTNSLVGEKIAITANQPETTRHPVRGVVHRENCQIVVVDTPGLHKPR 90 Query: 221 HQGAGIGDRFLKHTERTHV---LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 +G+R + T+ L+ +V +E + + I + +S + I+G Sbjct: 91 ---TLLGERLNDMVQETYSDVDLVAMVVPADEKIGPGDRWIYENVS------KGCKNIMG 141 Query: 278 L-SQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECLHDKI 326 + S++D V DT+ + EL G VP SS +G I +++ + ++ Sbjct: 142 IVSKVDKVSRDTIIERLIELQELLGPDAELVP--LSSKSGENINTLIDVMASQL 193 >gi|50365082|ref|YP_053507.1| GTP-binding protein Era [Mesoplasma florum L1] gi|50363638|gb|AAT75623.1| GTP-binding protein, cell cycle control [Mesoplasma florum L1] Length = 301 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 15/143 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I I+G PN GKST L + K I T N+ GI+ E + I D PGI Sbjct: 9 ISIVGRPNVGKSTLLNKIIGHKISIVTNKAQTTRNNIRGILTEKEYQLIFVDTPGI---- 64 Query: 221 HQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 H DRF ++ + V++ + A +E + IL+ELS N +++K I Sbjct: 65 HTSKNQIDRFMNSSAMRSMKEVDVVVFMAPA-DETIGKNDLFILNELSKKN-DIKK---I 119 Query: 276 VGLSQIDTVDSDTLARKKNELAT 298 + +S+ D V + L K E T Sbjct: 120 LVISKADVVSKEKLFLKATEWNT 142 >gi|258654106|ref|YP_003203262.1| GTP-binding proten HflX [Nakamurella multipartita DSM 44233] gi|258557331|gb|ACV80273.1| GTP-binding proten HflX [Nakamurella multipartita DSM 44233] Length = 487 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 19/170 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + I G NAGKS+ L +T A + D F TL P + + + L D G +++ Sbjct: 269 VSIAGYTNAGKSSLLNRLTDAGVLVEDALFATLDPTTRRSRTTDGRVYTLTDTVGFVRHL 328 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKIEIV 276 HQ L+ +LLH+V +EN +A A + +L E+ A + EI+ Sbjct: 329 PHQLVESFRSTLEEIGDADLLLHVVDGSDENPEAQVSAVREVLGEIDALSV-----AEII 383 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ID D TL R ++ L G V F S+ TG GI + L D+I Sbjct: 384 VVNKIDAADEMTLTRLRHVLP---GAV-F-VSARTGAGIDE----LRDRI 424 >gi|157374575|ref|YP_001473175.1| GTP-binding protein EngA [Shewanella sediminis HAW-EB3] gi|189037163|sp|A8FT74|DER_SHESH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|157316949|gb|ABV36047.1| small GTP-binding protein [Shewanella sediminis HAW-EB3] Length = 488 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L + A + AA Q I + L R+K Sbjct: 60 IDGTEEGIETHMAEQSLAAIEEADVVLFLTDA-RAGLTAADQAICEHLRR-----REKTT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V +++D +D+D+ A G+V ++ ++ G G+ ++E Sbjct: 114 FVVANKVDGIDADSAC--AEFWALGLGEV-YQMAAAQGRGVTNMIE 156 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 76/172 (44%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E+++ D G+ + + Sbjct: 202 MAIIGKPNVGKSTLTNRILGEERVVVYDSPGTTRDSIYIPMERDGREYVMIDTAGVRRRS 261 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK E +V+L I+ A E + + L+A + ++ Sbjct: 262 KVHETVEKFSVIKTLKAVEDCNVVLLIIDAREGIAEQDLGLLGFALNA------GRALVI 315 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D D R K+EL + G + F S++ G G+ + E + + Sbjct: 316 AVNKWDGIDQDIKDRVKSELDRRLGFIDFARIHFISALHGTGVGHLFESVQE 367 >gi|124486217|ref|YP_001030833.1| hypothetical protein Mlab_1400 [Methanocorpusculum labreanum Z] gi|124363758|gb|ABN07566.1| small GTP-binding protein [Methanocorpusculum labreanum Z] Length = 370 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 38/70 (54%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I ++G P+ GKST L +T A+ + Y FTTL G+++ + + DIPG+I A Sbjct: 65 IVLVGFPSVGKSTLLNKLTGAQSETGSYAFTTLTVVPGLMEYKGAKIQILDIPGLIAGAA 124 Query: 222 QGAGIGDRFL 231 G G G + Sbjct: 125 MGKGRGKEVI 134 >gi|162312178|ref|XP_001713127.1| GTP binding protein Nog1 (predicted) [Schizosaccharomyces pombe 972h-] gi|17368097|sp|O94659|NOG1_SCHPO RecName: Full=Probable nucleolar GTP-binding protein 1 gi|157310403|emb|CAA22190.2| GTP binding protein Nog1 (predicted) [Schizosaccharomyces pombe] Length = 642 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 11/139 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA+ + Y FTT +G Y + + D PGI+ + + Sbjct: 173 VCGYPNVGKSSFMNKVTRAQVDVQPYAFTTKSLFVGHFDYKYLRWQVIDTPGILDHPLEQ 232 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + C + ++ Y+S K+ I+ Sbjct: 233 MNTIE-----MQSITAMAHLRSAVLYFMDLSEMCGYSVAAQVKLYHSIKPLFANKVTILV 287 Query: 278 LSQIDTVDSDTLARKKNEL 296 L++ID + + L +K EL Sbjct: 288 LNKIDAMRPEDLDQKNQEL 306 >gi|262340851|ref|YP_003283706.1| putative GTP-binding protein [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272188|gb|ACY40096.1| putative GTP-binding protein [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 292 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 2/84 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + S+ K I Y P TT + LGI+ E + I +D PGII Sbjct: 8 VNIIGFPNTGKSTLMNSLVGEKLSITTYKPQTTRHRILGIINESNFQIIFSDTPGIIDPV 67 Query: 221 HQGAGIGDRFL-KHTERTHVLLHI 243 + I +++ K E ++L + Sbjct: 68 YPMQKIMMQYVEKALEDADIILFL 91 >gi|154302085|ref|XP_001551453.1| hypothetical protein BC1G_09723 [Botryotinia fuckeliana B05.10] gi|150855497|gb|EDN30689.1| hypothetical protein BC1G_09723 [Botryotinia fuckeliana B05.10] Length = 366 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL SVTRA + Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLKSVTRADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGIL 225 >gi|319745497|gb|EFV97801.1| GTP-binding protein Era [Streptococcus agalactiae ATCC 13813] Length = 314 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 23 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHK-- 80 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 81 -PKTALGDFMVESAYSTLREVETVLFMVPA-DEKRGKGDDMIIERLKAAKIPV-----IL 133 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ +P +++ L D + Sbjct: 134 VINKIDKVHPDQLLEQIDDFRSQMDFKEVVP--ISALQGNNVPTLIKLLTDNL 184 >gi|302884352|ref|XP_003041072.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256721968|gb|EEU35359.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 394 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST ++T+ A++P+ T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITKCNLGNPANFPYATIDPEEARVIVPDDRFDWLVEKYKPKSVV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+ + + GAG+G+ FL H + +V ++ Sbjct: 84 PANLTVYDIAGLTRGSSTGAGLGNAFLSHIRAVDAIFQVVRCFDD 128 >gi|147805283|emb|CAN77861.1| hypothetical protein VITISV_005457 [Vitis vinifera] Length = 863 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 4/111 (3%) Query: 164 IIGLPN--AGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 IIG P GKST L +T + A Y FTTL GI+ + L D+PGII+ A Sbjct: 77 IIGAPKGIVGKSTLLTLLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIEGAS 136 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 +G G G + + ++ + ++L ++ A + Q + EL A L KK Sbjct: 137 EGKGRGRQVIAVSKSSDIVLMVLDA--SKSEGHRQILTKELEAVGLRLNKK 185 >gi|294140150|ref|YP_003556128.1| GTP-binding protein EngA [Shewanella violacea DSS12] gi|293326619|dbj|BAJ01350.1| GTP-binding protein EngA [Shewanella violacea DSS12] Length = 490 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRASLSGYEFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L + A + AA I D L R K Sbjct: 60 IDGTEEGIEVHMAEQSLAAIEEADVVLFLTDA-RAGLTAADHAIADHLRR-----RDKTT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V +++D +D+D+ A G+V ++ ++ G G+ ++E Sbjct: 114 FVVANKVDGIDADSAC--AEFWALGLGEV-YQMAASQGRGVTNMIE 156 Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 89/189 (47%), Gaps = 25/189 (13%) Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTT---LYPNLGIVKE 203 Q+++ L +KL IIG PN GKST + + + + D P TT +Y + + +E Sbjct: 192 QKRLQDLPIKL----AIIGKPNVGKSTLINRILGEERVVVYDSPGTTRDSIY--IPMERE 245 Query: 204 GYKEFILADIPGIIKNAHQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCIL 259 G +E++L D G+ + + + + LK E +V+L I+ A E + + Sbjct: 246 G-REYVLIDTAGVRRRSKVHETVEKFSVIKTLKAIEDCNVVLLIIDAREGIAEQDLGLLG 304 Query: 260 DELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGI 315 L+A + ++ +++ D ++ + R K+EL + G + F S++ G G+ Sbjct: 305 FALNA------GRALVIAVNKWDGINQEIKDRVKSELDRRLGFIDFARIHFISALHGTGV 358 Query: 316 PQILECLHD 324 + E + + Sbjct: 359 GHLYESVEE 367 >gi|255263213|ref|ZP_05342555.1| GTP-binding protein Era [Thalassiobium sp. R2A62] gi|255105548|gb|EET48222.1| GTP-binding protein Era [Thalassiobium sp. R2A62] Length = 307 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 13/171 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I +IG PNAGKST L + AK I + T + G+ EG + + D PG+ K Sbjct: 13 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGQSQLVFVDTPGLFKPR 72 Query: 221 HQ--GAGIGDRFLKHTERTHVLLHIVS--ALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + A + + ++ V+L I S + E V+A + + E N+ + + Sbjct: 73 RRLDRAMVAAAWSGASDADVVVLMIESHRGITEGVEAILEAL--EERGGNAPV-----AL 125 Query: 277 GLSQIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECLHDKI 326 L++ID V S+ L E+ + F S+ GHG+ + L +I Sbjct: 126 ALNKIDRVKSEVLLGLTKEMNDRFDFAETFMISAEKGHGVDTLRTWLAGRI 176 >gi|312864794|ref|ZP_07725025.1| ribosome biogenesis GTPase Era [Streptococcus downei F0415] gi|311099921|gb|EFQ58134.1| ribosome biogenesis GTPase Era [Streptococcus downei F0415] Length = 321 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 30 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDQEQIVFIDTPGIHKPK 89 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A EE + I++ L A + I+ Sbjct: 90 ---TALGDFMVESAYSTLREVETVLFMVPADEERGKGD-NMIMERLKAAKIPV-----IL 140 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L K ++ +Q VP S++ G+ I ++ L D + Sbjct: 141 VINKIDQVHPDQLLEKIDDFRSQMDFKEIVP--ISALQGNNIETLMMILKDNL 191 >gi|289618229|emb|CBI54953.1| unnamed protein product [Sordaria macrospora] Length = 660 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 31/54 (57%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + G PN GKS+F+ SVTRA + Y FTT +G + Y + + D PGI+ Sbjct: 164 VAGFPNVGKSSFVRSVTRADTPVEPYAFTTKSLFVGHLDYKYLRYQVIDTPGIL 217 >gi|308483920|ref|XP_003104161.1| hypothetical protein CRE_01113 [Caenorhabditis remanei] gi|308258469|gb|EFP02422.1| hypothetical protein CRE_01113 [Caenorhabditis remanei] Length = 337 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 43/82 (52%) Query: 167 LPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGI 226 P+ GKST L ++ ++A Y FTTL G+++ + L D+PGII+ A G G Sbjct: 42 FPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEGAKDGKGR 101 Query: 227 GDRFLKHTERTHVLLHIVSALE 248 G + + ++L ++ ++ Sbjct: 102 GKQVIAVARTCSLILMVLDVMK 123 >gi|145232046|ref|XP_001399488.1| nucleolar GTP-binding protein 1 [Aspergillus niger CBS 513.88] gi|134056398|emb|CAK47632.1| unnamed protein product [Aspergillus niger] Length = 655 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 15/177 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL S+TRA + Y FTT +G Y F D PGI+ + + Sbjct: 172 ICGYPNVGKSSFLRSITRADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + H+ SA+ + + QC + D++ ++S KI + Sbjct: 232 MNTIE-----MQSITAIAHLRSAVMYFMDLSEQCGYSVGDQIKLFHSIKPLFANKIVFLV 286 Query: 278 LSQIDTVDSDTLARK-KNELAT--QCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 +++ID + L + + EL + G V + S T G+ + DK+ + R Sbjct: 287 VNKIDVRRPEDLEPEYQQELQNVLKSGDVELLQLSCTTTEGVTAVKNAACDKLLAER 343 >gi|315646583|ref|ZP_07899701.1| GTP-binding proten HflX [Paenibacillus vortex V453] gi|315278226|gb|EFU41546.1| GTP-binding proten HflX [Paenibacillus vortex V453] Length = 429 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 5/110 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + ++G NAGKST L +T A I D F TL P ++ KE +L D G I+N Sbjct: 210 VALVGYTNAGKSTLLNRLTAADVYIEDQLFATLDPTSRALELPSGKEVVLTDTVGFIQNL 269 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV---SALEENVQAAYQCILDELSAYN 266 H L+ ++LH+V S + + A IL +L A + Sbjct: 270 PHDLVAAFRATLEEANEADLILHVVDSSSPMRDEQMAVVHSILQDLGAAD 319 >gi|239993400|ref|ZP_04713924.1| GTP-binding protein HflX [Alteromonas macleodii ATCC 27126] Length = 429 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 6/113 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T + AD F TL P L + + ILAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNTITDSHVYAADQLFATLDPTLRKIDLKDVGPAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 ++ H L+ T+ +LLH+V + A Y+ +DE++ E+ Sbjct: 257 RHLPHDLVAAFKATLQETQEADLLLHVVDIAD----AKYRETMDEVNDVLEEI 305 >gi|254418675|ref|ZP_05032399.1| GTP-binding protein Era [Brevundimonas sp. BAL3] gi|196184852|gb|EDX79828.1| GTP-binding protein Era [Brevundimonas sp. BAL3] Length = 315 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI 216 IIG PNAGKST + +T +K I TT +P GI EG + +L D PGI Sbjct: 13 AIIGAPNAGKSTLVNRLTGSKVSIVTQKVQTTRFPVRGIAMEGDAQIVLVDTPGI 67 >gi|315444872|ref|YP_004077751.1| GTP-binding protein HflX [Mycobacterium sp. Spyr1] gi|315263175|gb|ADT99916.1| GTP-binding protein HflX [Mycobacterium sp. Spyr1] Length = 482 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 12/146 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I+G NAGKS+ L ++T A + + F TL P G + +G +EF+L D G Sbjct: 258 VPSVAIVGYTNAGKSSLLNALTGAGVLVENALFATLEPTTRRGELSDG-REFVLTDTVGF 316 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELR 270 ++ H + + F L+ +LLH+V + N A A + +++E+ A ++ Sbjct: 317 VR--HLPTQLVEAFRSTLEEVVDAELLLHVVDGSDANPLAQINAVRTVVNEVVA-ETDAT 373 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNEL 296 E++ +++ID D LA+ + L Sbjct: 374 APPELLVVNKIDAADGLVLAQLRQAL 399 >gi|303389315|ref|XP_003072890.1| NOG1 nucleolar GTP-binding protein [Encephalitozoon intestinalis ATCC 50506] gi|303302033|gb|ADM11530.1| NOG1 nucleolar GTP-binding protein [Encephalitozoon intestinalis ATCC 50506] Length = 528 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 32/54 (59%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + G PN GKS+F+ V+RA ++ YPFTT +G Y ++ + D PGI+ Sbjct: 172 VCGFPNVGKSSFVRKVSRADVEVQSYPFTTKSLYVGHFDYKYLQWQVIDTPGIL 225 >gi|54296963|ref|YP_123332.1| GTP-binding protein Era [Legionella pneumophila str. Paris] gi|53750748|emb|CAH12155.1| hypothetical protein lpp1004 [Legionella pneumophila str. Paris] Length = 311 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 6/75 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST L + + K I P TT + LGI EG +F+ D PGI Sbjct: 24 IALVGRPNVGKSTLLNRILQQKLSITSRKPQTTRHSILGIRTEGEFQFVYVDTPGI---- 79 Query: 221 HQG-AGIGDRFLKHT 234 HQG A +R + T Sbjct: 80 HQGNAKAINRMMNKT 94 >gi|239997025|ref|ZP_04717549.1| GTP-binding protein EngA [Alteromonas macleodii ATCC 27126] Length = 481 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 11/161 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +T + +ADYP T G K ++FI+ D GI + Sbjct: 5 VALVGRPNVGKSTLFNRLTNTRDALVADYPGLTRDRKYGQAKFEKRQFIVVDTGGITGDE 64 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A + + L E V+L +V A + A Q I D L N KK+ +V + Sbjct: 65 EGIDAEMAQQSLLAIEEADVVLFLVDA-RAGMLPADQGIADHLRRIN----KKVFVVA-N 118 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++D +D D+ + + L G + + ++ G G+ Q+L+ Sbjct: 119 KVDGIDGDSESAEFYSLG--LGDIK-QIAAAHGRGVSQLLQ 156 >gi|319405459|emb|CBI79078.1| GTP-binding protein Era [Bartonella sp. AR 15-3] Length = 300 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 19/169 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI---- 216 + +IG+PNAGKST + + K I + TT GIV + IL D PG+ Sbjct: 12 VALIGVPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLVRGIVIYDKTQIILIDTPGVFRPH 71 Query: 217 --IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 ++ A A G K+ + VL+ + S L + V A +LD L + + + Sbjct: 72 KRLERAMVSAAWGGA--KNADILLVLIDVQSGLSDEVSA----MLDILKSVEQD-----K 120 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQV-PFEFSSITGHGIPQILECL 322 I+ L++IDTV +L ++ Q + F S++ G G +L L Sbjct: 121 ILVLNKIDTVVKSSLLALTAQVNEQVNFLQTFMISALNGSGCKDLLHYL 169 >gi|116180782|ref|XP_001220240.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] gi|88185316|gb|EAQ92784.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] Length = 400 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLG--IVKEGYKEFI---------- 209 GI+GL N GKST ++T+ A++P+ T+ P IV + +++ Sbjct: 24 GIVGLANVGKSTLFQAITKCTLGNPANFPYATIDPEEARVIVPDARYDWLCEKYNPKSRV 83 Query: 210 -----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+ + A GAG+G+ FL H + +V ++ Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDD 128 >gi|326437100|gb|EGD82670.1| GTP binding protein 4 [Salpingoeca sp. ATCC 50818] Length = 635 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 14/181 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA ++ Y FTT +G Y + + D P I+ + Sbjct: 68 VTGFPNVGKSSFVNKVTRADVEVQPYVFTTKSLFVGHTDYQYLRWQVIDTPAILDHP--- 124 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + R + L H+ + + + + QC + + S + + KK + Sbjct: 125 --LEQRNTIEMQAITALAHLRACVLYVMDLSQQCGFTVEQQFSLFENIKPLFAKKPLAII 182 Query: 278 LSQIDTV---DSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 +++ DT+ D+ T +++ + G S++TG G+ Q+ DK+ + R +++ Sbjct: 183 VNKADTMKIEDAPTEVQERLKAYEAEGISVLSMSTLTGEGVAQVKNAACDKLMTYRMKSK 242 Query: 335 F 335 Sbjct: 243 L 243 >gi|325117255|emb|CBZ52807.1| putative nucleolar GTP-binding protein [Neospora caninum Liverpool] Length = 718 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 9/159 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ SV+ A + + FTT +G Y + + D PGI+ + Sbjct: 176 LTGYPNVGKSSFINSVSNANVDVQPFAFTTKSLFVGHFDFLYNRWQIIDTPGILDHPLDE 235 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL---RKKIEIVGLSQ 280 + + L T TH+ +V L+ + + Y I ++S + S L + K +V L++ Sbjct: 236 RNLIE-MLAITALTHIQSVVVFMLDISEECGY-TIESQVSLFQSLLVLFKNKPILVVLNK 293 Query: 281 IDTVDSDTLARKKNELATQCGQ---VPF-EFSSITGHGI 315 D + L+ + EL G+ V F E S++TG G+ Sbjct: 294 TDKMRLANLSPEHRELIRTMGKDRTVEFVEASTLTGAGV 332 >gi|307199320|gb|EFN79973.1| Probable nucleolar GTP-binding protein 1 [Harpegnathos saltator] Length = 641 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 15/167 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ + Sbjct: 171 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + +R + + L H+ +A+ + QC + +++ + S K I Sbjct: 230 ----LEERNVIEMQAVTALAHLRAAVLYFYDLSEQCGYSLEEQVKLFESIKPLFTNKPLI 285 Query: 276 VGLSQIDTVDSDTLARKKNELATQC---GQVP-FEFSSITGHGIPQI 318 + ++++D + + L+ +K + +P E S+IT G+ ++ Sbjct: 286 IVMNKMDIIRLEELSLEKRNILKPLENDKNIPVLEMSTITDFGVMEV 332 >gi|194863188|ref|XP_001970319.1| GG10559 [Drosophila erecta] gi|190662186|gb|EDV59378.1| GG10559 [Drosophila erecta] Length = 652 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 85/184 (46%), Gaps = 15/184 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ + Sbjct: 171 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + +R + + L H+ + + + + QC + +++ + S K I Sbjct: 230 ----LEERNVIEMQAITALAHLRACVLYFMDISEQCGHSLEEQVKLFESIKPLFTNKPLI 285 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQ---VPFEF-SSITGHGIPQILECLHDKIFSIRG 331 + +++ID + D L ++ + T+ + +P S++ G+ ++ +++ S R Sbjct: 286 LAINKIDILTPDDLPEERRAIITKLQEDKNIPVMLMSTVQETGVMEVKTEACERLLSYRV 345 Query: 332 ENEF 335 + + Sbjct: 346 DQKM 349 >gi|94989900|ref|YP_598000.1| GTP-binding protein Era [Streptococcus pyogenes MGAS10270] gi|189037675|sp|Q1JI67|ERA_STRPD RecName: Full=GTPase Era gi|94543408|gb|ABF33456.1| GTP-binding protein era [Streptococcus pyogenes MGAS10270] Length = 298 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 7 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHK-- 64 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 65 -PKTALGDFMVESAYSTLREVETVLFMVPA-DEKRGKGDDMIIERLKAAKIPV-----IL 117 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ +P +++ L D + Sbjct: 118 VINKIDKVHPDQLLEQIDDFRSQMDFKEVVP--ISALEGNNVPTLIKLLTDNL 168 >gi|217077039|ref|YP_002334755.1| GTP-binding protein [Thermosipho africanus TCF52B] gi|217036892|gb|ACJ75414.1| GTP-binding protein [Thermosipho africanus TCF52B] Length = 358 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 4/59 (6%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 DI I+G+ N GKS+ L++ T+ P I+ +P TT LGIVK + D PGI+ N Sbjct: 153 DILIVGVTNVGKSSLLSAFTKEHPTISPFPGTT----LGIVKRKVFNTYIYDTPGILTN 207 >gi|212212569|ref|YP_002303505.1| GTP-binding protein [Coxiella burnetii CbuG_Q212] gi|212010979|gb|ACJ18360.1| GTP-binding protein [Coxiella burnetii CbuG_Q212] Length = 454 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 33/187 (17%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST ++T A AD F TL P ++ + IL D G I Sbjct: 203 VPTVSLVGYTNAGKSTLFNAITEANVYTADQLFATLDPTFRQLELPTLVKIILVDTVGFI 262 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIV-------SALEENVQAAYQCI----LDELSAY 265 ++ H L+ + + +LLH+V S + E VQ + I + +L Y Sbjct: 263 RDLPHDLIAAFRATLEESRQADLLLHVVDAHSPDSSVMLEEVQKVLETIGAEEVPQLFIY 322 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI----PQILEC 321 N KI+++ S+ +D D + + S++TG GI P ++E Sbjct: 323 N-----KIDLLE-SRKPRIDYDEKGKPRR----------VWLSALTGVGIDLLNPAVVEL 366 Query: 322 LHDKIFS 328 L D I + Sbjct: 367 LGDTILT 373 >gi|322701744|gb|EFY93493.1| nucleolar GTP-binding protein [Metarhizium acridum CQMa 102] Length = 657 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL S+TRA + Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLKSITRADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGIL 225 >gi|302413884|ref|XP_003004774.1| nucleolar GTP-binding protein [Verticillium albo-atrum VaMs.102] gi|261355843|gb|EEY18271.1| nucleolar GTP-binding protein [Verticillium albo-atrum VaMs.102] Length = 658 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL SV+RA + Y FTT G Y F D PGI+ + + Sbjct: 172 ICGFPNVGKSSFLKSVSRADVDVQPYAFTTKSLFCGHFDYKYLRFQCIDTPGILDHPLEE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + + L H+ SA+ + + QC Sbjct: 232 MSTIE-----MQSITALAHLRSAVMYFMDLSEQC 260 >gi|254516810|ref|ZP_05128868.1| GTP-binding proten HflX [gamma proteobacterium NOR5-3] gi|219674315|gb|EED30683.1| GTP-binding proten HflX [gamma proteobacterium NOR5-3] Length = 439 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 12/172 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 ++ + ++G NAGKST ++T +K AD F TL P L ++ + +LAD G I Sbjct: 217 LSTVALVGYTNAGKSTLFNTLTGSKVYAADQLFATLDPTLRRLEVDNLGPVVLADTVGFI 276 Query: 218 KNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 A G+ + F L+ T +LLH+V A ++ + + L ++ R +E Sbjct: 277 --ARLPHGLVEAFKATLEETREADLLLHVVDAASDDRDDNRREVHAVLEEIGADERPVLE 334 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I ++ID ++ + +E C S+ G G+ +LE L +++ Sbjct: 335 IY--NKIDLLEMQPRIDRDDE-GRPCR---VWISAQKGLGLDLVLEALAERL 380 >gi|77408568|ref|ZP_00785304.1| GTP-binding protein Era [Streptococcus agalactiae COH1] gi|77172842|gb|EAO75975.1| GTP-binding protein Era [Streptococcus agalactiae COH1] Length = 299 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHKPK 67 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 68 ---TALGDFMVESAYSTLREVETVLFMVPA-DEKRGKGDDMIIERLKAAKIPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ +P +++ L D + Sbjct: 119 VINKIDKVHPDQLLEQIDDFRSQMDFKEVVP--ISALQGNNVPTLIKLLTDNL 169 >gi|22537642|ref|NP_688493.1| GTP-binding protein Era [Streptococcus agalactiae 2603V/R] gi|25011601|ref|NP_735996.1| GTP-binding protein Era [Streptococcus agalactiae NEM316] gi|76787745|ref|YP_330131.1| GTP-binding protein Era [Streptococcus agalactiae A909] gi|77405197|ref|ZP_00782295.1| GTP-binding protein Era [Streptococcus agalactiae H36B] gi|77413995|ref|ZP_00790168.1| GTP-binding protein Era [Streptococcus agalactiae 515] gi|81453614|sp|Q8DYI1|ERA_STRA5 RecName: Full=GTPase Era gi|81744499|sp|Q8E443|ERA_STRA3 RecName: Full=GTPase Era gi|123601489|sp|Q3K022|ERA_STRA1 RecName: Full=GTPase Era gi|22534528|gb|AAN00366.1|AE014260_22 GTP-binding protein Era [Streptococcus agalactiae 2603V/R] gi|24413141|emb|CAD47219.1| Unknown [Streptococcus agalactiae NEM316] gi|76562802|gb|ABA45386.1| GTP-binding protein Era [Streptococcus agalactiae A909] gi|77159975|gb|EAO71113.1| GTP-binding protein Era [Streptococcus agalactiae 515] gi|77176199|gb|EAO78970.1| GTP-binding protein Era [Streptococcus agalactiae H36B] Length = 299 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHKPK 67 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 68 ---TALGDFMVESAYSTLREVETVLFMVPA-DEKRGKGDDMIIERLKAAKIPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ +P +++ L D + Sbjct: 119 VINKIDKVHPDQLLEQIDDFRSQMDFKEVVP--ISALQGNNVPTLIKLLTDNL 169 >gi|322711643|gb|EFZ03216.1| GTP-binding protein YchF [Metarhizium anisopliae ARSEF 23] Length = 394 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKST ++T+ A++P+ T+ P V E YK Sbjct: 24 GIVGLANVGKSTLFQAITKCNLGNPANFPYATIDPEEARVIVPDARFDWLCEKYKPKSQV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G+ + + GAG+G+ FL H + +V ++ Sbjct: 84 PANLTVYDIAGLTRGSSTGAGLGNAFLSHIRAVDAIFQVVRCFDD 128 >gi|322706839|gb|EFY98419.1| nucleolar GTP-binding protein [Metarhizium anisopliae ARSEF 23] Length = 657 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL S+TRA + Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLKSITRADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGIL 225 >gi|19745599|ref|NP_606735.1| GTP-binding protein Era [Streptococcus pyogenes MGAS8232] gi|21909873|ref|NP_664141.1| GTP-binding protein Era [Streptococcus pyogenes MGAS315] gi|28896432|ref|NP_802782.1| GTP-binding protein Era [Streptococcus pyogenes SSI-1] gi|50913761|ref|YP_059733.1| GTP-binding protein Era [Streptococcus pyogenes MGAS10394] gi|56808804|ref|ZP_00366518.1| COG1159: GTPase [Streptococcus pyogenes M49 591] gi|71903042|ref|YP_279845.1| GTP-binding protein Era [Streptococcus pyogenes MGAS6180] gi|94988021|ref|YP_596122.1| GTP-binding protein Era [Streptococcus pyogenes MGAS9429] gi|94991907|ref|YP_600006.1| GTP-binding protein Era [Streptococcus pyogenes MGAS2096] gi|139474287|ref|YP_001129003.1| GTP-binding protein Era [Streptococcus pyogenes str. Manfredo] gi|209558959|ref|YP_002285431.1| GTP-binding protein Era [Streptococcus pyogenes NZ131] gi|306827874|ref|ZP_07461142.1| GTP-binding protein Era [Streptococcus pyogenes ATCC 10782] gi|54037044|sp|P64088|ERA_STRP8 RecName: Full=GTPase Era gi|54040764|sp|P64087|ERA_STRP3 RecName: Full=GTPase Era gi|73919338|sp|Q5XDG3|ERA_STRP6 RecName: Full=GTPase Era gi|123640374|sp|Q48UW6|ERA_STRPM RecName: Full=GTPase Era gi|189037673|sp|Q1JD46|ERA_STRPB RecName: Full=GTPase Era gi|189037674|sp|Q1JN21|ERA_STRPC RecName: Full=GTPase Era gi|189037677|sp|A2RG20|ERA_STRPG RecName: Full=GTPase Era gi|226741243|sp|B5XK74|ERA_STRPZ RecName: Full=GTPase Era gi|19747725|gb|AAL97234.1| putative GTP-binding protein [Streptococcus pyogenes MGAS8232] gi|21904060|gb|AAM78944.1| putative GTP-binding protein [Streptococcus pyogenes MGAS315] gi|28811683|dbj|BAC64615.1| putative GTP binding protein [Streptococcus pyogenes SSI-1] gi|50902835|gb|AAT86550.1| GTP-binding protein era [Streptococcus pyogenes MGAS10394] gi|71802137|gb|AAX71490.1| putative GTP-binding protein [Streptococcus pyogenes MGAS6180] gi|94541529|gb|ABF31578.1| GTP-binding protein [Streptococcus pyogenes MGAS9429] gi|94545415|gb|ABF35462.1| GTP-binding protein era [Streptococcus pyogenes MGAS2096] gi|134272534|emb|CAM30799.1| GTP-binding protein Era homolog [Streptococcus pyogenes str. Manfredo] gi|209540160|gb|ACI60736.1| GTP-binding protein Era [Streptococcus pyogenes NZ131] gi|304429922|gb|EFM32963.1| GTP-binding protein Era [Streptococcus pyogenes ATCC 10782] Length = 298 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 7 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHK-- 64 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 65 -PKTALGDFMVESAYSTLREVETVLFMVPA-DEKRGKGDDMIIERLKAAKIPV-----IL 117 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ +P +++ L D + Sbjct: 118 VINKIDKVHPDQLLEQIDDFRSQMDFKEVVP--ISALEGNNVPTLIKLLTDNL 168 >gi|164429252|ref|XP_962060.2| nucleolar GTP-binding protein 1 [Neurospora crassa OR74A] gi|157073000|gb|EAA32824.2| nucleolar GTP-binding protein 1 [Neurospora crassa OR74A] Length = 660 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 31/54 (57%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + G PN GKS+F+ SVTRA + Y FTT +G + Y + + D PGI+ Sbjct: 164 VAGFPNVGKSSFVRSVTRADTPVEPYAFTTKSLFVGHLDYKYLRYQVIDTPGIL 217 >gi|320539676|ref|ZP_08039340.1| putative GTPase [Serratia symbiotica str. Tucson] gi|320030288|gb|EFW12303.1| putative GTPase [Serratia symbiotica str. Tucson] Length = 426 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 39/170 (22%), Positives = 79/170 (46%), Gaps = 7/170 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 + + ++G NAGKST +T AD F TL P L I + +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRMTSPGVYAADQLFATLDPTLRRISVADVGDTVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ H L+ T + +LLH++ A++ V + + L+ +S+ + ++ Sbjct: 257 RHLPHDLVAAFKATLQETRQASLLLHVIDAVDIRVNENMEAVNTVLAEIDSD--EIPTLL 314 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ID +D +N+ + + S+ +G G+ + + L +++ Sbjct: 315 VMNKIDMLDDFVPRIDRND---ENLPIRVWLSAASGEGLSLLYQALTERL 361 >gi|307166683|gb|EFN60680.1| Uncharacterized protein C6orf224 [Camponotus floridanus] Length = 1362 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 9/91 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF------ILADIPG 215 +GI+G+PN GKSTF +T+++ ++PF T+ PN K+ + + L DIP Sbjct: 24 MGIVGIPNVGKSTFFNVLTKSQAAAENFPFCTIDPNENNKKKSFLQLTKDLSDCLRDIPA 83 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 + A + + E H I+SA Sbjct: 84 PSTIKYPKANL---YYASAEDIHPAKRIISA 111 >gi|300023207|ref|YP_003755818.1| GTP-binding proten HflX [Hyphomicrobium denitrificans ATCC 51888] gi|299525028|gb|ADJ23497.1| GTP-binding proten HflX [Hyphomicrobium denitrificans ATCC 51888] Length = 467 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 7/170 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + ++G NAGKST +T A D F TL P + VK + IL+D G I + Sbjct: 236 VAVVGYTNAGKSTLFNKITGAGVVAMDQVFATLDPTMREVKLPSARRIILSDTVGFISDL 295 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEIV 276 R L+ ++LH+ E +A + +L EL + I+ V Sbjct: 296 PTSLVAAFRATLEEVVEADLILHVRDIAHEETEAQARDVEKVLSELGIDTLPVDGHIQEV 355 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID + D A ++E A + + P S++TG GI +L+ + ++ Sbjct: 356 -WNKIDLLTGDRRAELQHE-AQRNERPPVLVSAVTGEGIVPLLDAIDSRL 403 >gi|160932726|ref|ZP_02080115.1| hypothetical protein CLOLEP_01567 [Clostridium leptum DSM 753] gi|156867800|gb|EDO61172.1| hypothetical protein CLOLEP_01567 [Clostridium leptum DSM 753] Length = 675 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 6/101 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I ++G PN GK+T ++T + + ++P T+ LG+++ G +AD+PGI ++ Sbjct: 5 IALVGNPNCGKTTLFNALTGSTQYVGNWPGVTVEKKLGVLR-GNPRVTVADLPGIYSLEA 63 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCI 258 A FL+ ER V+L+I+ A LE N+ Q + Sbjct: 64 ASPDEKAARAFLEK-ERPDVILNIIDATNLERNLYLTTQLL 103 >gi|310795794|gb|EFQ31255.1| GTP-binding protein YchF [Glomerella graminicola M1.001] Length = 394 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 28/138 (20%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV---KEGYK------------ 206 GI+GL N GKST ++T+ A++P+ T+ P V E Y Sbjct: 24 GIVGLANVGKSTLFQAITKCNLGNPANFPYATIDPEEARVIVPDERYDWLCEKYNPKSRV 83 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAA 254 + DI G+ + A GAG+G+ FL H + +V ++ N Sbjct: 84 PANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVNPTRD 143 Query: 255 YQCILDELSAYNSELRKK 272 + I DEL + E +K Sbjct: 144 LEIISDELRLKDIEFTEK 161 >gi|71664510|ref|XP_819235.1| nucleolar GTP-binding protein 1 [Trypanosoma cruzi strain CL Brener] gi|70884527|gb|EAN97384.1| nucleolar GTP-binding protein 1, putative [Trypanosoma cruzi] Length = 654 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 32/57 (56%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I G PN GKS+F+ VTRA ++ Y FTT +G Y + + D PGI+ ++ Sbjct: 174 ITGFPNVGKSSFMNKVTRADVEVQPYAFTTKSLFVGHTDYKYTSWQVIDTPGILDHS 230 >gi|205374162|ref|ZP_03226962.1| GTP-binding protein Era [Bacillus coahuilensis m4-4] Length = 306 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 19/155 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D P TT G++ + + D PGI K Sbjct: 15 VSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTLADSQIVFIDTPGIHKPK 74 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++L +V + E + + I+++L ++ + + Sbjct: 75 HK---LGDFMMKVAQNTLKEVDIVLFMVD-VAEGIGKGDEFIIEKLKNVSTPV-----FL 125 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSIT 311 L++ID + D L E ++ FEF+ I Sbjct: 126 VLNKIDAIHPDELFSIIEEYRSR-----FEFTEIV 155 >gi|302878478|ref|YP_003847042.1| GTP-binding proten HflX [Gallionella capsiferriformans ES-2] gi|302581267|gb|ADL55278.1| GTP-binding proten HflX [Gallionella capsiferriformans ES-2] Length = 382 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 2/91 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G NAGKST +T+A +A+ F TL + + EG E +++D G I++ Sbjct: 200 VSIVGYTNAGKSTLFNRLTKANVYVANQLFATLDTTSRRMYSEGAGEIVVSDTVGFIRHL 259 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEEN 250 G R L+ T + +LLH+V A N Sbjct: 260 PHGLVAAFRSTLEETIQADLLLHVVDASNPN 290 >gi|223943121|gb|ACN25644.1| unknown [Zea mays] Length = 451 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 34/59 (57%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I + ++G PN GKS+ + ++ KP++ YPFTT +G + + F + D PG++ Sbjct: 252 IPTLCLVGSPNVGKSSLVRILSSGKPEVCSYPFTTRGILMGHIVSNQERFQVTDTPGLL 310 >gi|187735583|ref|YP_001877695.1| ferrous iron transport protein B [Akkermansia muciniphila ATCC BAA-835] gi|187425635|gb|ACD04914.1| ferrous iron transport protein B [Akkermansia muciniphila ATCC BAA-835] Length = 753 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 14/164 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T A + ++P T+ G +K G+K I+ D+PGI + Sbjct: 6 IALAGNPNCGKTTLFNALTGANQYVGNWPGVTVEKKEGRLK-GHKNIIIEDLPGIYSLSP 64 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R T+ ++L++V S LE N+ Q EL + I+ L Sbjct: 65 YTLEEVVSRNYLVTDHPSLILNLVDGSNLERNLYLTTQL---------CELGVPV-IIAL 114 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + +D V +LA G E S++ G GI ++++ + Sbjct: 115 NMMDIVRKRGDRIDTEKLARNLGCQVLEISALKGTGIRELIDAV 158 >gi|325962851|ref|YP_004240757.1| small GTP-binding protein domain/GTP-binding conserved hypothetical protein TIGR00650 [Arthrobacter phenanthrenivorans Sphe3] gi|323468938|gb|ADX72623.1| small GTP-binding protein domain/GTP-binding conserved hypothetical protein TIGR00650 [Arthrobacter phenanthrenivorans Sphe3] Length = 527 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 17/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I G NAGKS+ L +T A + + F TL P + +G + LAD G Sbjct: 305 VPSVAIAGYTNAGKSSLLNRLTDAGVLVENALFATLDPTVRKAETADGLG-YTLADTVGF 363 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKK 272 +++ Q L+ + ++LH+V A + + AA + + E+ A RK Sbjct: 364 VRSLPTQLVEAFRSTLEEVADSDLILHVVDASHPDPEGQIAAVRKVFSEVDA-----RKV 418 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI+ L++ D D + R K S+ TG GIP++L + + I Sbjct: 419 PEIIVLNKADAADPFVVERLKQREPRHVV-----VSARTGEGIPELLRAISEAI 467 >gi|217967031|ref|YP_002352537.1| small GTP-binding protein [Dictyoglomus turgidum DSM 6724] gi|217336130|gb|ACK41923.1| small GTP-binding protein [Dictyoglomus turgidum DSM 6724] Length = 328 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 33/55 (60%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + +IG PN GKS F +T + +ADYPFTT+ P +G++ + L D+P + Sbjct: 83 VLLIGPPNTGKSKFFTLLTGVESLVADYPFTTMNPVIGMLPYENIQIQLVDLPPL 137 >gi|167761151|ref|ZP_02433278.1| hypothetical protein CLOSCI_03556 [Clostridium scindens ATCC 35704] gi|167660817|gb|EDS04947.1| hypothetical protein CLOSCI_03556 [Clostridium scindens ATCC 35704] Length = 680 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 13/130 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I ++G IG PN GK+T + T A K+A++P T+ G +EF L D+PGI Sbjct: 4 IINVGFIGNPNCGKTTLFNAFTGANLKVANWPGVTVEKKEGKAMYKNQEFKLIDLPGIYS 63 Query: 219 -NAHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEI 275 ++ R ++ V++ ++ S+LE N+ Q I EL K + + Sbjct: 64 LTSYTMEETVSRECIMSDEVDVIVDVIDASSLERNLYLTLQLI---------ELGKPV-V 113 Query: 276 VGLSQIDTVD 285 + L+ +D V+ Sbjct: 114 LALNMMDIVE 123 >gi|308070766|ref|YP_003872371.1| ferrous iron transport protein B [Paenibacillus polymyxa E681] gi|305860045|gb|ADM71833.1| Ferrous iron transport protein B [Paenibacillus polymyxa E681] Length = 669 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 17/167 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I + G PN GK++ +TR ++ ++ T+ GI+++ K +L D+PG + Sbjct: 4 IALFGNPNTGKTSLFNKLTRTYAEVGNWSGVTVEKKTGILRD--KSAVLVDLPGAYSLLP 61 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 G+ R+L E L++IV A L+ N+ Q L Y L ++G Sbjct: 62 LSLDEGVATRYLLE-EPPTALINIVDASQLQRNLYLTVQ-----LLEYGRPL-----VLG 110 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 L+ D D+ L K LA Q + TG G Q+L L + Sbjct: 111 LNMTDVADATGLRVNKELLADQLNVPIIPMVARTGSGSKQMLASLRE 157 >gi|298705633|emb|CBJ28881.1| Nog1, nucleolar GTPase [Ectocarpus siliculosus] Length = 675 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 17/96 (17%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA+ + Y FTT +G + Y + + D PGI+ + + Sbjct: 173 LTGFPNVGKSSFMNKVTRAEVDVQPYAFTTKSLYVGHMDYRYLRWQVVDTPGILDHPLE- 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL 259 ER + + V+AL A QC + Sbjct: 232 -----------ERNTIEMQAVTAL-----AHLQCCV 251 >gi|163754016|ref|ZP_02161139.1| putative GTP-binding protein [Kordia algicida OT-1] gi|161326230|gb|EDP97556.1| putative GTP-binding protein [Kordia algicida OT-1] Length = 294 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 16/164 (9%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + A V I TT + LGIV + IL+D PGIIK A Sbjct: 8 VNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGEDFQMILSDTPGIIKPA 67 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 ++ F+K E VL+++V E++++ DE + + + KI ++ L Sbjct: 68 YELQSSMMDFVKSAFEDADVLIYMVEIGEKSLK-------DE-AFFKKIINSKIPVILL- 118 Query: 280 QIDTVDSDTLARKKNELATQCGQVP----FEFSSITGHGIPQIL 319 ++ +D + + + ++ +VP + S++ +PQ+ Sbjct: 119 -LNKIDKSSQEQLEEQMELWKEKVPTAEIYPISALENFNVPQVF 161 >gi|322815101|gb|EFZ23839.1| nucleolar GTP-binding protein 1, putative [Trypanosoma cruzi] Length = 695 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 8/107 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+F+ VTRA ++ Y FTT +G Y + + D PGI+ ++ Sbjct: 215 ITGFPNVGKSSFMNKVTRADVEVQPYAFTTKSLFVGHTDYKYTGWQVIDTPGILDHS--- 271 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS 267 + +R + + L H+ + + + + QC I +LS + S Sbjct: 272 --LEERNVIEMQAITALAHLRACILFFMDLSTQCGYTIAQQLSLFQS 316 >gi|167037414|ref|YP_001664992.1| small GTP-binding protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115827|ref|YP_004185986.1| GTP-binding proten HflX [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856248|gb|ABY94656.1| small GTP-binding protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928918|gb|ADV79603.1| GTP-binding proten HflX [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 413 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 7/112 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 I I+G NAGKST L ++T A+ + D F TL P +V +E IL D G I+ Sbjct: 201 IAIVGYTNAGKSTLLNALTNAEVYVEDKLFATLDPTARRLVLPSGREVILIDTVGFIRKL 260 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNS 267 H L+ + +LLH++ +EE ++ + +L +L N+ Sbjct: 261 PHDLVEAFKSTLEEAKYADLLLHVIDVTSPDMEEKIKVV-EKVLSDLDVINT 311 >gi|326803486|ref|YP_004321304.1| ribosome biogenesis GTPase Era [Aerococcus urinae ACS-120-V-Col10a] gi|326650900|gb|AEA01083.1| ribosome biogenesis GTPase Era [Aerococcus urinae ACS-120-V-Col10a] Length = 303 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 17/168 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I +D TT I + + D PGI K Sbjct: 12 VAIVGRPNVGKSTLLNHIIGQKVAIMSDKAQTTRNKIHAIYTTDEVQIVFIDTPGIHKPK 71 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +G+ +K + V+L +V++ E+ + + I+++++AYN+ +I+ Sbjct: 72 HE---LGEYMVKSAYSALDEVEVILMLVNSTEK-IGPGDRFIMEKIAAYNTP-----KIL 122 Query: 277 GLSQIDTVDSDTLARKKNELATQ--CGQVPFEFSSITGHGIPQILECL 322 +++ D +D + LA + + Q+ S++TG + Q+L+ L Sbjct: 123 AVNKTDQLDKEDLAAYLESIPNKDIFDQI-IPLSALTGDNVDQLLKEL 169 >gi|312144164|ref|YP_003995610.1| GTP-binding proten HflX [Halanaerobium sp. 'sapolanicus'] gi|311904815|gb|ADQ15256.1| GTP-binding proten HflX [Halanaerobium sp. 'sapolanicus'] Length = 410 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 2/115 (1%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII-KNA 220 ++G NAGKST + ++ A +AD F TL + ++ + IL+D G I K Sbjct: 192 ALVGYTNAGKSTIMNLLSGANSHVADQLFATLDSTMRQLELPVGRTIILSDTVGFISKLP 251 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 HQ L+ E ++LH++ + + ++ + + +EL NS K+I+I Sbjct: 252 HQLFASFRTTLEEIENADIILHVIDSSDPKMEKNIKVVEEELENLNSSKSKRIKI 306 >gi|120437318|ref|YP_863004.1| GTP-binding protein Era [Gramella forsetii KT0803] gi|117579468|emb|CAL67937.1| GTP-binding protein Era [Gramella forsetii KT0803] Length = 295 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 10/161 (6%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + A + I TT + LGIV + IL+D PGIIK A Sbjct: 8 VNIIGNPNVGKSTLMNAFIGERLSIITSKAQTTRHRILGIVNGEDFQMILSDTPGIIKPA 67 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 ++ F+K E VL++IV EE ++ + +++S NSE+ ++ L+ Sbjct: 68 YELQASMMDFVKSAFEDADVLIYIVEIGEEGLKD--EAFFNKIS--NSEVPV---LLLLN 120 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFE-FSSITGHGIPQIL 319 +ID + + L + A + S++ G +P + Sbjct: 121 KIDKSNQEQLEEQVQYWAEKVPTAEIHPISALEGFNVPAVF 161 >gi|323136434|ref|ZP_08071516.1| GTP-binding proten HflX [Methylocystis sp. ATCC 49242] gi|322398508|gb|EFY01028.1| GTP-binding proten HflX [Methylocystis sp. ATCC 49242] Length = 444 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 26/173 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFIL--------ADI 213 + ++G NAGKST +T+A+ D F TL P L ++ + +L +D+ Sbjct: 215 VALVGYTNAGKSTLFNRLTKAEVLAQDMLFATLDPTLRQIRLPHGARVLLSDTVGFISDL 274 Query: 214 PGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELR 270 P ++ +A + L+ V+LH+ E+ +A + ILDEL Sbjct: 275 PTMLVSAFRAT------LEEVTLADVILHVRDVSHEDSEAQARDVETILDELGLKGEAEG 328 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCG----QVPFEFSSITGHGIPQIL 319 + +E+ ++ID +D + R++ T G + P S++TG G+ ++L Sbjct: 329 RILEV--WNKIDALDPE---RQEALRQTARGFDPQRRPVLASALTGQGLDELL 376 >gi|194708690|gb|ACF88429.1| unknown [Zea mays] Length = 462 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 34/59 (57%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I + ++G PN GKS+ + ++ KP++ YPFTT +G + + F + D PG++ Sbjct: 263 IPTLCLVGSPNVGKSSLVRILSSGKPEVCSYPFTTRGILMGHIVSNQERFQVTDTPGLL 321 >gi|167040081|ref|YP_001663066.1| small GTP-binding protein [Thermoanaerobacter sp. X514] gi|256752602|ref|ZP_05493456.1| GTP-binding proten HflX [Thermoanaerobacter ethanolicus CCSD1] gi|300914164|ref|ZP_07131480.1| GTP-binding proten HflX [Thermoanaerobacter sp. X561] gi|307724600|ref|YP_003904351.1| GTP-binding proten HflX [Thermoanaerobacter sp. X513] gi|166854321|gb|ABY92730.1| small GTP-binding protein [Thermoanaerobacter sp. X514] gi|256748540|gb|EEU61590.1| GTP-binding proten HflX [Thermoanaerobacter ethanolicus CCSD1] gi|300889099|gb|EFK84245.1| GTP-binding proten HflX [Thermoanaerobacter sp. X561] gi|307581661|gb|ADN55060.1| GTP-binding proten HflX [Thermoanaerobacter sp. X513] Length = 413 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 7/112 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 I I+G NAGKST L ++T A+ + D F TL P +V +E IL D G I+ Sbjct: 201 IAIVGYTNAGKSTLLNALTNAEVYVEDKLFATLDPTARRLVLPSGREVILIDTVGFIRKL 260 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNS 267 H L+ + +LLH++ +EE ++ + +L +L N+ Sbjct: 261 PHDLVEAFKSTLEEAKYADLLLHVIDVTSPDMEEKIKVV-EKVLSDLDVINT 311 >gi|17367377|sp|Q99P77|NOG1_RAT RecName: Full=Nucleolar GTP-binding protein 1; AltName: Full=Chronic renal failure gene protein gi|13160994|gb|AAK13446.1|AF325355_1 G protein-binding protein CRFG [Rattus norvegicus] Length = 637 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G V Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHVDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|291562499|emb|CBL41315.1| GTP-binding protein HflX [butyrate-producing bacterium SS3/4] Length = 417 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 10/160 (6%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN-A 220 I+G NAGKST L +T A D F TL P + G ++ +L D G I+ Sbjct: 205 AIVGYTNAGKSTLLNKLTGAGILAEDKLFATLDPTTRALTLPGGEKVLLTDTVGFIRKLP 264 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H L+ V+LH+V + + + L + ++ K I ++ Sbjct: 265 HHLVEAFKSTLEEARYCDVILHVVDCSNPQMDMQMHVVYETLRRLD--IKDKEIITVFNK 322 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 +D D+DT R + + S+ TG GI ++L+ Sbjct: 323 VDRPDADTACRDMS------ADYKVKLSAKTGEGIEELLD 356 >gi|188575916|ref|YP_001912845.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520368|gb|ACD58313.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 428 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 1/86 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 I ++G NAGKST ++T A+ +AD F TL P + + ILAD G +++ Sbjct: 190 IALVGYTNAGKSTLFNALTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLP 249 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA 246 H+ L +LLHIV A Sbjct: 250 HELVAAFRSTLSEARDADLLLHIVDA 275 >gi|157693029|ref|YP_001487491.1| GTP-binding protein Era [Bacillus pumilus SAFR-032] gi|157681787|gb|ABV62931.1| GTPase [Bacillus pumilus SAFR-032] Length = 301 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 21/168 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D P TT G++ + I D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTNSSQTIFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++L +++A +E + I++ L ++ + + Sbjct: 71 HK---LGDFMMKVAQNTLKEVDLILFMINA-KEGYGKGDEFIIERLKQTSTPV-----FL 121 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILE 320 +++ID + D L +E T+ PF+ S++ G+ I +L+ Sbjct: 122 VVNKIDQIHPDELFLLIDEYRTRY---PFKEIVPISALEGNNIDTLLQ 166 >gi|304415378|ref|ZP_07396044.1| GTPase associated with the 50S subunit of the ribosome [Candidatus Regiella insecticola LSR1] gi|304282766|gb|EFL91263.1| GTPase associated with the 50S subunit of the ribosome [Candidatus Regiella insecticola LSR1] Length = 396 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 2/90 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I + +IG NAGKS+ S+T A AD F TL P L I + +LAD G I Sbjct: 202 IPTVSLIGYTNAGKSSLFNSMTAADVYTADQLFATLDPTLRSIYVTDVGDTVLADTVGFI 261 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA 246 ++ H L+ T + +LLH++ A Sbjct: 262 RHLPHDLVVAFKATLQETRQASLLLHVIDA 291 >gi|149241000|ref|XP_001526257.1| nucleolar GTP-binding protein 1 [Lodderomyces elongisporus NRRL YB-4239] gi|146450380|gb|EDK44636.1| nucleolar GTP-binding protein 1 [Lodderomyces elongisporus NRRL YB-4239] Length = 650 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 30/54 (55%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL S+T+A ++ Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLKSITKADVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGIL 225 >gi|71754959|ref|XP_828394.1| nucleolar GTP-binding protein 1 [Trypanosoma brucei TREU927] gi|70833780|gb|EAN79282.1| nucleolar GTP-binding protein 1 [Trypanosoma brucei] Length = 655 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 15/162 (9%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+F+ VTRA ++ Y FTT +G Y + + D PGI+ ++ Sbjct: 174 ITGFPNVGKSSFMNKVTRADVEVQPYAFTTKSLFVGHTDFKYASWQVIDTPGILDHS--- 230 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + +R + + L H+ + + + + QC I ++S + S K IV Sbjct: 231 --LEERNVIEMQAITALAHLRACILFFMDLSTQCGHSIAQQVSLFKSIGPLFTGKPVIVV 288 Query: 278 LSQIDTVDSDTLARKKNELAT----QCGQVPFEFSSITGHGI 315 ++ D D + ++ L +CG S++T G+ Sbjct: 289 FNKSDLCTFDDITAEEQSLVMTAIEECGAKWITTSTLTDAGV 330 >gi|310643995|ref|YP_003948753.1| ferrous iron transporter b [Paenibacillus polymyxa SC2] gi|309248945|gb|ADO58512.1| Ferrous iron transporter B [Paenibacillus polymyxa SC2] Length = 669 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 17/167 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I + G PN GK++ +TR ++ ++ T+ GI+++ K +L D+PG + Sbjct: 4 IALFGNPNTGKTSLFNKLTRTYAEVGNWSGVTVEKKTGILRD--KSAVLVDLPGAYSLLP 61 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 G+ R+L E L++IV A L+ N+ Q L Y L ++G Sbjct: 62 LSLDEGVATRYLLE-EPPAALINIVDASQLQRNLYLTVQ-----LLEYGRPL-----VLG 110 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 L+ D D+ L K LA Q + TG G Q+L L + Sbjct: 111 LNMTDVADATGLRVNKELLADQLNVPIIPMVARTGSGSKQMLASLRE 157 >gi|269956055|ref|YP_003325844.1| GTP-binding proten HflX [Xylanimonas cellulosilytica DSM 15894] gi|269304736|gb|ACZ30286.1| GTP-binding proten HflX [Xylanimonas cellulosilytica DSM 15894] Length = 515 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 18/184 (9%) Query: 150 KIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKE 207 K + K I ++ I G NAGKS+ L ++T A + + F TL P + +G + Sbjct: 286 KRVERKRHAIPNVAIAGYTNAGKSSLLNALTDAGVLVENALFATLDPTVRRATTDDG-RV 344 Query: 208 FILADIPGIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELS 263 + LAD G +++ HQ L+ +LLH+V A + + AA + +L E+ Sbjct: 345 YTLADTVGFVRHLPHQLVEAFRSTLEEVGDAALLLHVVDASHPDPEGQIAAVREVLAEIP 404 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDTLAR-KKNELATQCGQVPFEFSSITGHGIPQILECL 322 ++ +R E+V L++ D D + + R ++ E T S+ TG GI ++ + Sbjct: 405 GIDA-VR---EVVVLNKADVADPEVIGRIQRREKRTVV------VSAHTGEGIAELRHLI 454 Query: 323 HDKI 326 D++ Sbjct: 455 ADEL 458 >gi|237815534|ref|ZP_04594531.1| GTP-binding proten HflX [Brucella abortus str. 2308 A] gi|237788832|gb|EEP63043.1| GTP-binding proten HflX [Brucella abortus str. 2308 A] Length = 505 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 268 VALVGYTNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNL 327 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ ++LH+ + + A + + + L+ E + +V + Sbjct: 328 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 387 Query: 279 SQIDTVDSD--TLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A + + ++ G+ P S+ITG G+ ++L + +I Sbjct: 388 NKIDNLDESAREAALRLAAVGSEEGR-PIPVSAITGEGVDRLLSLIETRI 436 >gi|226507204|ref|NP_001151368.1| nucleolar GTP-binding protein 1 [Zea mays] gi|195646236|gb|ACG42586.1| nucleolar GTP-binding protein 1 [Zea mays] Length = 462 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 34/59 (57%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I + ++G PN GKS+ + ++ KP++ YPFTT +G + + F + D PG++ Sbjct: 263 IPTLCLVGSPNVGKSSLVRILSSGKPEVCSYPFTTRGILMGHIVSNQERFQVTDTPGLL 321 >gi|329890078|ref|ZP_08268421.1| GTP-binding protein Era [Brevundimonas diminuta ATCC 11568] gi|328845379|gb|EGF94943.1| GTP-binding protein Era [Brevundimonas diminuta ATCC 11568] Length = 321 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 29/173 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 IIG PNAGKST + +T +K I TT +P GI +G + +L D PGI Sbjct: 19 AIIGAPNAGKSTLVNRLTGSKVSIVTQKVQTTRFPVRGIAIKGDAQIVLVDTPGIFTPRR 78 Query: 222 QGAGIGDRFLKHT-----ERTHVLLHIV-------------SALEENVQAAYQCILDELS 263 + DR + + + V++H++ +A + + I+ L Sbjct: 79 R----LDRAMVASAWGGAQDADVVVHLIDAQSHIDAEGREGTAADRRSAEDTETIIANLK 134 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDT-LARKKNELATQCGQVPFEFSSITGHGI 315 A ++++ I+ L++ID + DT LA + T F S+++G G+ Sbjct: 135 ATDTKV-----ILALNKIDGMRRDTLLALSQRLFETGVYSEVFMISALSGDGV 182 >gi|227510288|ref|ZP_03940337.1| GTP-binding protein Era [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227524439|ref|ZP_03954488.1| GTP-binding protein Era [Lactobacillus hilgardii ATCC 8290] gi|227088398|gb|EEI23710.1| GTP-binding protein Era [Lactobacillus hilgardii ATCC 8290] gi|227189940|gb|EEI70007.1| GTP-binding protein Era [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 300 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 15/167 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT G+ + + D PGI K Sbjct: 11 VAIVGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGVYTTDEAQVVFIDTPGIHKPQ 70 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 ++ G + D L + +L +V+A E A I+D L ++ K I ++ ++ Sbjct: 71 NKLGDFMMDSALSALKEVDAVLFMVNATERR-GAGDNFIIDRL----KDVHKPIYLL-IN 124 Query: 280 QIDTVDSD----TLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 +ID + D + + KN L+ + F S++ G+ +P++L L Sbjct: 125 KIDEITPDDVMAIIEQYKNALSFKEV---FPISALQGNNVPELLTSL 168 >gi|77359239|ref|YP_338814.1| protease GTPase subunit [Pseudoalteromonas haloplanktis TAC125] gi|76874150|emb|CAI85371.1| HflX, putative GTPase subunit of protease with nucleoside triP hydrolase domain [Pseudoalteromonas haloplanktis TAC125] Length = 429 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 7/112 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKST +T + AD F TL P L ++ G ILAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNRITNSDVYAADQLFATLDPTLRKLELGDVGPVILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIV----SALEENVQAAYQCILDELSA 264 ++ H L T + LH++ + L+EN++ Q +L E+ A Sbjct: 257 RHLPHDLVAAFKATLTETREADLQLHVIDVADARLKENIEQV-QSVLKEIEA 307 >gi|58582568|ref|YP_201584.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84624454|ref|YP_451826.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58427162|gb|AAW76199.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84368394|dbj|BAE69552.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 439 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 1/86 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 I ++G NAGKST ++T A+ +AD F TL P + + ILAD G +++ Sbjct: 201 IALVGYTNAGKSTLFNALTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLP 260 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA 246 H+ L +LLHIV A Sbjct: 261 HELVAAFRSTLSEARDADLLLHIVDA 286 >gi|262198512|ref|YP_003269721.1| GTP-binding proten HflX [Haliangium ochraceum DSM 14365] gi|262081859|gb|ACY17828.1| GTP-binding proten HflX [Haliangium ochraceum DSM 14365] Length = 563 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 16/138 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP---NLGIVKEGYKEFILADIPGIIK 218 + I+G NAGKST L ++T K + F TL P L +E +E +L D G I+ Sbjct: 380 VAIVGYTNAGKSTLLNALTEGNAKAENKLFATLDPISRRLRFPQE--REVVLTDTVGFIR 437 Query: 219 NAHQGAGIGDR-FLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKI 273 + R L+ E +L+H+V E++V+A Q + D EL +K Sbjct: 438 DLPPDLVTAFRATLEELEDADLLVHVVDLSDPDYEQHVRAVTQILSD------LELGEKP 491 Query: 274 EIVGLSQIDTVDSDTLAR 291 ++G ++ D +D++ R Sbjct: 492 RLLGFNKCDRLDAEEAGR 509 >gi|220908618|ref|YP_002483929.1| GTP-binding proten HflX [Cyanothece sp. PCC 7425] gi|219865229|gb|ACL45568.1| GTP-binding proten HflX [Cyanothece sp. PCC 7425] Length = 553 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 21/146 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------EGYKEFILADIPG 215 + ++G NAGKST L +T+A+ AD F TL P + + ++ +L D G Sbjct: 388 VTLVGYTNAGKSTLLNVLTQAEVYTADQLFATLDPTTRRLSLADPDHQSRRDLLLTDTVG 447 Query: 216 IIKNAHQGAGIGDRF---LKHTERTHVLLHIVS----ALEENVQAAYQCILDELSAYNSE 268 I H + D F L+ LLH+V A E ++ + + +L EL Sbjct: 448 FIH--HLPPALMDAFRATLEEVSEADALLHVVDLSHPAWERHIHSVAE-MLAELPTVPPR 504 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKN 294 +++ +++D VDS+TL + + Sbjct: 505 -----QLLVFNKLDQVDSETLQQAQQ 525 >gi|46123575|ref|XP_386341.1| hypothetical protein FG06165.1 [Gibberella zeae PH-1] Length = 658 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL S+TRA + Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLKSITRADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGIL 225 >gi|320590518|gb|EFX02961.1| GTP-binding protein [Grosmannia clavigera kw1407] Length = 451 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 52/134 (38%), Gaps = 51/134 (38%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYP-------------------------FTTL-- 194 IG++G P+AGKS+ L S+T A K+ Y FTT+ Sbjct: 7 IGLVGKPSAGKSSMLNSLTDASSKVGLYTSSSSPPKEEHSLTQPLACRKLSTLRFTTIDP 66 Query: 195 ----------------------YPNLGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRF 230 PN G +G + L D+ G++ AHQG G+G++F Sbjct: 67 QRAVGYLQVDCACARYGISDRCKPNYGSCHDGRRSVPIELLDVAGLVPGAHQGRGLGNKF 126 Query: 231 LKHTERTHVLLHIV 244 L L+H+V Sbjct: 127 LDDLRHADALIHVV 140 >gi|159027574|emb|CAO86947.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 318 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 16/172 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 IGIIG PN GKST + + K I T L GIV + + I D PGI K Sbjct: 29 IGIIGRPNVGKSTLMNQLVGQKIAITSPIAQTTRNRLRGIVTDERSQMIFVDTPGIHKPH 88 Query: 221 HQGAGIGDRFLKHTER----THVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +G +K+ E ++L +V + + + I D L+ + I+ Sbjct: 89 HE---LGKVLVKNAENAINSVDLVLFVVDS-SNFLGGGDRYIADLLTKNQTP-----TIL 139 Query: 277 GLSQID--TVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 GL++ D D + + LA + +FS++ G GIP++ L D + Sbjct: 140 GLNKADQQPEDPEPIDDSYRTLAAENNWPLLKFSALEGTGIPELQNLLIDSL 191 >gi|329770520|ref|ZP_08261898.1| GTP-binding protein Era [Gemella sanguinis M325] gi|328836269|gb|EGF85938.1| GTP-binding protein Era [Gemella sanguinis M325] Length = 302 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 32/157 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PNAGKST L ++ + K I +D P TT G+ + + + D PGI K Sbjct: 11 VTIIGRPNAGKSTLLNNILKQKIAIMSDKPQTTRNIINGVYTDSDSQIVFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLK-------HTERTHVLL-----------HIVSALEENVQAAYQCI---- 258 H+ +GD +K +E ++++ H+++ ++E + I Sbjct: 71 HK---LGDYMMKLASSAIQESEIVYLIINASEKFGPGDQHLINIVKELKVPTFLLINKID 127 Query: 259 ------LDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 L E+ + +EL +EIV +S + +++ D L Sbjct: 128 LITPEKLLEIITFYNELYDFVEIVPISALKSINVDNL 164 >gi|297248425|ref|ZP_06932143.1| GTP-binding protein HflX [Brucella abortus bv. 5 str. B3196] gi|297175594|gb|EFH34941.1| GTP-binding protein HflX [Brucella abortus bv. 5 str. B3196] Length = 490 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 253 VALVGYTNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNL 312 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ ++LH+ + + A + + + L+ E + +V + Sbjct: 313 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 372 Query: 279 SQIDTVDSD--TLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A + + ++ G+ P S+ITG G+ ++L + +I Sbjct: 373 NKIDNLDESAREAALRLAAVGSEEGR-PIPVSAITGEGVDRLLSLIETRI 421 >gi|253577257|ref|ZP_04854576.1| ferrous iron transporter B [Paenibacillus sp. oral taxon 786 str. D14] gi|251843371|gb|EES71400.1| ferrous iron transporter B [Paenibacillus sp. oral taxon 786 str. D14] Length = 676 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 17/167 (10%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNA 220 +IG PN GK++ ++TR+ + ++ T+ +G ++ +L D+PGI + Sbjct: 5 ALIGNPNTGKTSLFNALTRSYEYVGNWAGVTVEKKVGHLRSTTG--LLTDLPGIYTLHPL 62 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + GI +L +E VL++IV A LE N+ Q + E K + I+GL Sbjct: 63 SRDEGIAAEYLA-SEPPSVLVNIVDASNLERNLYLTLQLL---------EYGKPV-IIGL 111 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDK 325 + ID ++ L +LA G + TG G ++L + + Sbjct: 112 NMIDVAEARGLKVDPEKLAALLGVPVLPLIARTGKGSKEVLRAIEQQ 158 >gi|325282416|ref|YP_004254957.1| GTP-binding proten HflX [Deinococcus proteolyticus MRP] gi|324314225|gb|ADY25340.1| GTP-binding proten HflX [Deinococcus proteolyticus MRP] Length = 577 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 30/193 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRA--KPK---IADYPFTTLYPNLGIVKEGYK----EFILAD 212 +GI+G NAGKST L ++T A +P+ + F TL P ++GY + +L D Sbjct: 387 VGIVGYTNAGKSTLLNALTHAAEEPRRVLAENKLFATLRPT---SRQGYLSGVGQVVLTD 443 Query: 213 IPGIIKNAHQGAGIGDRFLKHTER---THVLLHIVSALEENVQAAYQC---ILDELSAYN 266 G I++ A + F E + VL+H++ A + + ++ ILD+L Sbjct: 444 TVGFIRDL--PADLSRAFRATLEEIGDSDVLVHVLDASSDAAELHFEAVTRILDDL---- 497 Query: 267 SELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE----CL 322 EL +V L+++D LAR + L Q G S+ G+ ++ + L Sbjct: 498 -ELADLPAVVALNKVDQARPAELARLQERL-EQAGVQTVAISAFKRQGLDELRDAVATAL 555 Query: 323 HDKIFSIRGENEF 335 H + F+ G E Sbjct: 556 HRQGFAQPGYAEM 568 >gi|325969382|ref|YP_004245574.1| small GTP-binding protein [Vulcanisaeta moutnovskia 768-28] gi|323708585|gb|ADY02072.1| small GTP-binding protein [Vulcanisaeta moutnovskia 768-28] Length = 350 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 18/32 (56%), Positives = 25/32 (78%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTT 193 I + G+PN GKS+F+ V+ KPK+A+YPFTT Sbjct: 172 IVVSGMPNVGKSSFVRCVSSGKPKVAEYPFTT 203 >gi|229588076|ref|YP_002870195.1| GTP-binding protein HflX [Pseudomonas fluorescens SBW25] gi|229359942|emb|CAY46796.1| GTP-binding protein HflX [Pseudomonas fluorescens SBW25] Length = 433 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 2/92 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +VT++ AD F TL P L + + +LAD G I Sbjct: 198 IPTVSLVGYTNAGKSTLFNNVTKSDVYAADQLFATLDPTLRRLDLDDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 ++ H+ L+ + + +LLH++ A E Sbjct: 258 RHLPHKLVEAFRSTLEESSNSDLLLHVIDAAE 289 >gi|167463165|ref|ZP_02328254.1| GTP-binding protein, HSR1-related [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381934|ref|ZP_08055884.1| protease modulator-like protein with GTP-binding domain [Paenibacillus larvae subsp. larvae B-3650] gi|321154074|gb|EFX46402.1| protease modulator-like protein with GTP-binding domain [Paenibacillus larvae subsp. larvae B-3650] Length = 425 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST L +T+A + + F TL P +K K+ +L D G I Sbjct: 203 VVQVALVGYTNAGKSTLLRELTQADVYVENQLFATLDPTSRTMKLPSGKDIVLTDTVGFI 262 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIV---SALEENVQAAYQCILDELSA 264 +N H + L+ ++LH+V S + + +L+EL A Sbjct: 263 QNLPHDLIAVFRATLEEANEADLILHVVDSSSKMRQEQMRVVDEVLEELGA 313 >gi|15674592|ref|NP_268766.1| GTP-binding protein Era [Streptococcus pyogenes M1 GAS] gi|71910203|ref|YP_281753.1| GTP-binding protein Era [Streptococcus pyogenes MGAS5005] gi|81175288|sp|P0C0B9|ERA_STRP1 RecName: Full=GTPase Era gi|13621702|gb|AAK33487.1| GTP-binding protein (GTPase) [Streptococcus pyogenes M1 GAS] gi|71852985|gb|AAZ51008.1| GTP-binding protein homolog [Streptococcus pyogenes MGAS5005] Length = 298 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 7 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHK-- 64 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 65 -PKTALGDFMVESAYSTLREVETVLFMVPA-DEKRGKGDDMIIERLKAAKIPV-----IL 117 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ +P +++ L D + Sbjct: 118 VINKIDKVHPDQLLEQIDDFHSQMDFKEVVP--ISALEGNNVPTLIKLLTDNL 168 >gi|309782315|ref|ZP_07677042.1| GTP-binding protein HflX [Ralstonia sp. 5_7_47FAA] gi|308918933|gb|EFP64603.1| GTP-binding protein HflX [Ralstonia sp. 5_7_47FAA] Length = 402 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 12/175 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST ++T+A+ A+ F TL + + EG +L+D G I++ Sbjct: 189 VSLVGYTNAGKSTLFNALTKARAYAANQLFATLDTTSRRLYLEGLGNVVLSDTVGFIRDL 248 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV---SALEENVQAAYQCILDELSAYNSELRKKIEIV 276 Q L+ T VLLH+V S ++ +LDE+ A +I+ Sbjct: 249 PTQLVAAFRATLEETVHADVLLHVVDAASTVKHEQMEQVDRVLDEIDASGIP-----QIL 303 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILECLHDKIFSIR 330 +++ID + +A + E + G V F S+I G G+ + E L + +R Sbjct: 304 VMNKIDAAEELRVAGPRIE-RDETGAVRRVFVSAIEGTGLDLLREALVETAIRLR 357 >gi|298243819|ref|ZP_06967626.1| GTP-binding protein YchF [Ktedonobacter racemifer DSM 44963] gi|297556873|gb|EFH90737.1| GTP-binding protein YchF [Ktedonobacter racemifer DSM 44963] Length = 391 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 26/133 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 IGIIGLP +GK+T ++T+A ++ Y +T+ NL +V K+ Sbjct: 5 IGIIGLPQSGKTTLFNTLTKAGAPVSGYATSTVQANLAVVQVPDTRVDSLSEIFQPRKKT 64 Query: 205 YKEFILADIPGIIKNAHQGA-----GIGDRFLKHTERTHVLLHIVSAL-EENVQAAYQCI 258 Y D+ G + A Q A G+ FL H L ++ +NV Y I Sbjct: 65 YTTVEFVDVAG-MGQATQAAKEKKEGLSAEFLGHIRNADALAIVLRTFANDNVPHVYNTI 123 Query: 259 --LDELSAYNSEL 269 + +L + N+EL Sbjct: 124 DPIRDLDSLNAEL 136 >gi|289662674|ref|ZP_06484255.1| GTP-binding protein [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289669638|ref|ZP_06490713.1| GTP-binding protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 439 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 1/86 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 I ++G NAGKST ++T A+ +AD F TL P + + ILAD G +++ Sbjct: 201 IALVGYTNAGKSTLFNALTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLP 260 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA 246 H+ L +LLHIV A Sbjct: 261 HELVAAFRSTLSEARDADLLLHIVDA 286 >gi|166712458|ref|ZP_02243665.1| GTP-binding protein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 439 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 1/86 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 I ++G NAGKST ++T A+ +AD F TL P + + ILAD G +++ Sbjct: 201 IALVGYTNAGKSTLFNALTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLP 260 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA 246 H+ L +LLHIV A Sbjct: 261 HELVAAFRSTLSEARDADLLLHIVDA 286 >gi|308799761|ref|XP_003074661.1| putative GTP-binding protein DRG (ISS) [Ostreococcus tauri] gi|116000832|emb|CAL50512.1| putative GTP-binding protein DRG (ISS) [Ostreococcus tauri] Length = 332 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 13/100 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI 209 +G++G P+ GKST L +T + A Y FTTL G+V+ +G I Sbjct: 69 VGLVGFPSVGKSTLLTKLTGVFSEAAAYEFTTLTCVPGVVRVFDDFERSERETDGTGARI 128 Query: 210 -LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 L D+PGII+ A G G + + V++ ++ AL+ Sbjct: 129 QLLDLPGIIEGAKDNKGRGRQVISTARTCDVIIIVLDALK 168 >gi|296241927|ref|YP_003649414.1| small GTP-binding protein [Thermosphaera aggregans DSM 11486] gi|296094511|gb|ADG90462.1| small GTP-binding protein [Thermosphaera aggregans DSM 11486] Length = 386 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 33/57 (57%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 A I +IGLPN GKS + +T AK +ADY F+T +P G+++ L D P + Sbjct: 82 AQICVIGLPNTGKSLLVNKLTGAKTVVADYEFSTTFPVPGMLRYEDVLLQLVDTPPL 138 >gi|256369537|ref|YP_003107047.1| GTP-binding protein, putative [Brucella microti CCM 4915] gi|255999699|gb|ACU48098.1| GTP-binding protein, putative [Brucella microti CCM 4915] Length = 472 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 4/169 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 235 VALVGYTNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNL 294 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ ++LH+ + + A + + + L+ E + +V + Sbjct: 295 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 354 Query: 279 SQIDTVDSDTLARKKNELATQCGQ-VPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A + + P S+ITG G+ ++L + +I Sbjct: 355 NKIDNLDESAREAALRLAAARSEEGRPIPVSAITGEGVDRLLSLIETRI 403 >gi|254427841|ref|ZP_05041548.1| GTP-binding proten HflX [Alcanivorax sp. DG881] gi|196194010|gb|EDX88969.1| GTP-binding proten HflX [Alcanivorax sp. DG881] Length = 457 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 5/106 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 I ++G NAGKST ++T +AD F TL P L VK G ILAD G I++ Sbjct: 207 ISLVGYTNAGKSTLFNAITTGDVYVADQLFATLDPTLRKVKVPGVGPAILADTVGFIRHL 266 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQ-AAYQCILDEL 262 H+ L+ T +LLH+ SA E + AA +L+E+ Sbjct: 267 PHRLVQAFRATLEETVNATLLLHVTDCSAEERDSNVAAVDEVLEEI 312 >gi|312958653|ref|ZP_07773173.1| GTP-binding protein [Pseudomonas fluorescens WH6] gi|311287196|gb|EFQ65757.1| GTP-binding protein [Pseudomonas fluorescens WH6] Length = 433 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 2/92 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +VT++ AD F TL P L + + +LAD G I Sbjct: 198 IPTVSLVGYTNAGKSTLFNNVTKSDVYAADQLFATLDPTLRRLDIDDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 ++ H+ L+ + + +LLH++ A E Sbjct: 258 RHLPHKLVEAFRSTLEESSNSDLLLHVIDAAE 289 >gi|302895289|ref|XP_003046525.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256727452|gb|EEU40812.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 659 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL S+TRA + Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLRSITRADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGIL 225 >gi|170744646|ref|YP_001773301.1| GTP-binding protein Era [Methylobacterium sp. 4-46] gi|168198920|gb|ACA20867.1| GTP-binding protein Era [Methylobacterium sp. 4-46] Length = 315 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 17/168 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGII--K 218 + +IG+PNAGKST L S+ +K I TT GI EG + + D PGI K Sbjct: 25 VALIGVPNAGKSTLLNSLVGSKVSIVSRKVQTTRALVRGIAIEGAAQIVFVDTPGIFAPK 84 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A + + + V L +V A + V + +L L ELR+ +I+ L Sbjct: 85 RRLDRAMVTSAWSGAADADAVCL-LVDA-RKGVDPEVEAVLGRL----PELRRP-KILVL 137 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECL 322 ++ID + + L + A G++PF+ S++TG G+ + L Sbjct: 138 NKIDVIARERLL---DLAAALNGRLPFDHTFMVSALTGDGVADLRRVL 182 >gi|87199823|ref|YP_497080.1| GTP-binding protein Era [Novosphingobium aromaticivorans DSM 12444] gi|87135504|gb|ABD26246.1| GTP-binding protein Era [Novosphingobium aromaticivorans DSM 12444] Length = 297 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 35/173 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + ++G PNAGKST + ++ K I T L GI EG + ILAD PG+ + Sbjct: 8 VAVLGAPNAGKSTLVNALVGQKVAIVSAKAQTTRARLMGIALEGEAQIILADTPGLFEP- 66 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL---------DELSAYNSELRK 271 R + +VSA + Q A +L D L + LR+ Sbjct: 67 ---------------RRRLDRAMVSAAWDGAQEADAILLVVDARKKKRDYLEPILASLRE 111 Query: 272 KIE--IVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQI 318 + E I+ L+++D+ + L L G+ F+ S++TG G+P++ Sbjct: 112 RPERKILVLNKVDSTPKEPLLVMAEAL---TGEAAFDEVFFVSALTGDGVPEL 161 >gi|62290025|ref|YP_221818.1| GTP-binding protein [Brucella abortus bv. 1 str. 9-941] gi|82699952|ref|YP_414526.1| ATP/GTP-binding domain-containing protein [Brucella melitensis biovar Abortus 2308] gi|189024265|ref|YP_001935033.1| GTP1/OBG [Brucella abortus S19] gi|254689337|ref|ZP_05152591.1| GTP1/OBG [Brucella abortus bv. 6 str. 870] gi|254697470|ref|ZP_05159298.1| GTP1/OBG [Brucella abortus bv. 2 str. 86/8/59] gi|254730367|ref|ZP_05188945.1| GTP1/OBG [Brucella abortus bv. 4 str. 292] gi|256257583|ref|ZP_05463119.1| GTP1/OBG [Brucella abortus bv. 9 str. C68] gi|260546577|ref|ZP_05822316.1| GTP1/OBG [Brucella abortus NCTC 8038] gi|260754853|ref|ZP_05867201.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260758070|ref|ZP_05870418.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260761894|ref|ZP_05874237.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883865|ref|ZP_05895479.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|62196157|gb|AAX74457.1| GTP-binding protein, hypothetical [Brucella abortus bv. 1 str. 9-941] gi|82616053|emb|CAJ11089.1| ATP/GTP-binding site motif A (P-loop):GTP1/OBG [Brucella melitensis biovar Abortus 2308] gi|189019837|gb|ACD72559.1| GTP1/OBG [Brucella abortus S19] gi|260095627|gb|EEW79504.1| GTP1/OBG [Brucella abortus NCTC 8038] gi|260668388|gb|EEX55328.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260672326|gb|EEX59147.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674961|gb|EEX61782.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260873393|gb|EEX80462.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] Length = 472 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 235 VALVGYTNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNL 294 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ ++LH+ + + A + + + L+ E + +V + Sbjct: 295 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 354 Query: 279 SQIDTVDSD--TLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A + + ++ G+ P S+ITG G+ ++L + +I Sbjct: 355 NKIDNLDESAREAALRLAAVGSEEGR-PIPVSAITGEGVDRLLSLIETRI 403 >gi|110835063|ref|YP_693922.1| GTP-binding protein HflX [Alcanivorax borkumensis SK2] gi|110648174|emb|CAL17650.1| GTP-binding protein HflX [Alcanivorax borkumensis SK2] Length = 480 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 5/106 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 I ++G NAGKST ++T +AD F TL P L VK G ILAD G I++ Sbjct: 230 ISLVGYTNAGKSTLFNAITTGDVYVADQLFATLDPTLRKVKVPGVGPAILADTVGFIRHL 289 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEE---NVQAAYQCILDEL 262 H+ L+ T ++LLH+ E N A +L+E+ Sbjct: 290 PHRLVQAFRATLEETVNANLLLHVTDCSAEERDNNVVAVNEVLEEI 335 >gi|85860146|ref|YP_462348.1| GTP-binding protein [Syntrophus aciditrophicus SB] gi|123738843|sp|Q2LVR8|ERA_SYNAS RecName: Full=GTPase Era gi|85723237|gb|ABC78180.1| GTP-binding protein [Syntrophus aciditrophicus SB] Length = 306 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 21/170 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 IGIIG PN GKST L + K I + P TT +GI +FI D PGI Sbjct: 18 IGIIGRPNVGKSTLLNGILGEKLAIITHKPQTTRNRIMGIRNADNAQFIFVDTPGI---- 73 Query: 221 HQGAGIGDRFLKHTER-----THVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 H + +R + T + +LL +V A + V I++ L + I Sbjct: 74 HSASTPLNRLMVRTATETFTDSDILLLVVEA-GQAVHPEDLPIIESLKESGT-----ISF 127 Query: 276 VGLSQIDTVDSDTLARKKN---ELATQCGQVPFEFSSITGHGIPQILECL 322 + L++ID + + L + L + +P S++TG GIP +L+ L Sbjct: 128 LILNKIDLIRKEQLLPLMDAYRNLHSFAELIP--ISALTGEGIPLLLDEL 175 >gi|119872264|ref|YP_930271.1| small GTP-binding protein [Pyrobaculum islandicum DSM 4184] gi|119673672|gb|ABL87928.1| small GTP-binding protein [Pyrobaculum islandicum DSM 4184] Length = 344 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 90/179 (50%), Gaps = 31/179 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ V+ A+P++A+YPFTT ++G ++ + DI II Sbjct: 171 IVVAGAPNVGKSSFVRCVSSARPEVAEYPFTTKQIHVGHIR------LRGDIVQIIDT-- 222 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL--SAYNSELRKKI--EIVG 277 G+ DR L +ER + + AL ++ A ++D S ++ E++ + EI Sbjct: 223 --PGLLDRPL--SERNVIEKQAILAL-RHLAGAIIFLIDPTPHSGFSIEMQLNLYREITA 277 Query: 278 ---------LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 +++ID +S+ L R ++ L T G+V S+I G +++ + +K + Sbjct: 278 NFSAPVVTVVNKIDIANSEELERARS-LFTPIGEV----STINCRGTSEVVNYVLNKFY 331 >gi|68535955|ref|YP_250660.1| bifunctional cytidylate kinase/GTP-binding protein [Corynebacterium jeikeium K411] gi|68263554|emb|CAI37042.1| cytidylate kinase [Corynebacterium jeikeium K411] Length = 777 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 25/178 (14%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKS+ L +T + + + TT+ P IV+ K + D GI K Sbjct: 518 VALVGRPNVGKSSLLNKITGEERSVVNNVAGTTVDPVDSIVELEEKTWKFVDTAGIRKKT 577 Query: 221 HQGAG----IGDRFLKHTERTHVLLHIVSALE---ENVQAAYQCILDELSAYNSELRKKI 273 Q G R + V++ +V A E E Q + ILD A Sbjct: 578 KQARGHEFYASLRTRSAIDAAEVVVFLVDASEPIAEQDQRVLRMILDSGRAL-------- 629 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPF----EFSSITGHGI----PQILECLH 323 +V ++ D VD D + E+ Q VP+ S+ TG + P ++E L Sbjct: 630 -VVAYNKWDLVDEDRRELLEREIELQLSHVPWARRVNISAKTGRALQKLEPAMIEALE 686 >gi|68066609|ref|XP_675279.1| GTP-binding protein [Plasmodium berghei strain ANKA] gi|56494373|emb|CAH94191.1| GTP-binding protein, putative [Plasmodium berghei] Length = 442 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 14/78 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI---------LAD 212 I IIG N GKS+ L S+T +K KIA Y FTT NL G+ F+ + D Sbjct: 262 ISIIGCTNVGKSSILNSITNSKSKIASYNFTTKEFNL-----GHYSFVNENDIFTAQIMD 316 Query: 213 IPGIIKNAHQGAGIGDRF 230 +PG+I + I ++ Sbjct: 317 LPGLINRQEEKRNIMEKL 334 >gi|292493695|ref|YP_003529134.1| GTP-binding proten HflX [Nitrosococcus halophilus Nc4] gi|291582290|gb|ADE16747.1| GTP-binding proten HflX [Nitrosococcus halophilus Nc4] Length = 383 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 4/130 (3%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + I ++G NAGKST +T A+ F TL P L ++ + +LAD G I Sbjct: 203 VPTISLVGYTNAGKSTLFNRLTTAQVLADSRLFATLDPTLRRLRLAMVRPLVLADTVGFI 262 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +N H L+ T +LLH+V A E Q + L +E ++EI Sbjct: 263 RNLPHDLVEAFRSTLEETRDAALLLHVVDASSEERQVLIAQVNRVLQTIGAEEVPQLEI- 321 Query: 277 GLSQIDTVDS 286 ++ID +++ Sbjct: 322 -YNKIDQIEN 330 >gi|257455507|ref|ZP_05620739.1| GTP-binding protein HflX [Enhydrobacter aerosaccus SK60] gi|257447076|gb|EEV22087.1| GTP-binding protein HflX [Enhydrobacter aerosaccus SK60] Length = 456 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 5/109 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + I ++G NAGKST ++T A+ F TL P L V G + +L D G + Sbjct: 199 VPTISLVGYTNAGKSTLFNTLTHENIYAANQLFATLDPTLRSVSWSGVGKVVLVDTVGFV 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDEL 262 ++ H+ L+ T +LLH++ + E++ AA Q +L E+ Sbjct: 259 RHLPHELVEAFHATLEETLEADLLLHVIDSHREDMHEQIAAVQSVLAEI 307 >gi|148559818|ref|YP_001259032.1| GTP-binding proten HflX [Brucella ovis ATCC 25840] gi|148371075|gb|ABQ61054.1| GTP-binding proten HflX [Brucella ovis ATCC 25840] Length = 490 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 8/171 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 253 VALVGYTNAGKSTLFNRMTGAQVLAEDMLFATLDPPLRRIRLPHGETVILSDTVGFISNL 312 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ ++LH+ + + A + + + L+ E + +V + Sbjct: 313 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 372 Query: 279 SQIDTVDSDTLARKKNELATQCGQ---VPFEFSSITGHGIPQILECLHDKI 326 ++ID +D AR+ G P S+ITG G+ ++L + +I Sbjct: 373 NKIDNLDES--AREAALRIAAAGSEEGRPIPVSAITGEGVDRLLSLIETRI 421 >gi|156743087|ref|YP_001433216.1| small GTP-binding protein [Roseiflexus castenholzii DSM 13941] gi|156234415|gb|ABU59198.1| small GTP-binding protein [Roseiflexus castenholzii DSM 13941] Length = 454 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 6/127 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I + I+G NAGKST L +++ A + D F TL P + G ++ +L D G I Sbjct: 224 IPVVAIVGYTNAGKSTLLNALSGANVRAEDRLFATLDPTTRQVTLPGGQQILLTDTVGFI 283 Query: 218 KN--AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + H A L+ V+LH++ N Q +LD L E R + + Sbjct: 284 QKLPTHLVAAFRA-TLEEIREADVVLHVLDITHPNAAQQTQTVLDTLRDLQVEDRPTLTV 342 Query: 276 VGLSQID 282 L+++D Sbjct: 343 --LNKVD 347 >gi|41054121|ref|NP_956145.1| nucleolar GTP-binding protein 1 [Danio rerio] gi|28374270|gb|AAH45447.1| GTP binding protein 4 [Danio rerio] gi|182890920|gb|AAI65777.1| Gtpbp4 protein [Danio rerio] Length = 631 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 16/182 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA ++ Y FTT +G ++ Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVEVQPYAFTTKSLFVGHMEYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNSELR----KKIEIV 276 + +R + L H+ +A+ + + QC + +L +N+ +R K IV Sbjct: 230 --LEERNTIEMQAITALAHLRAAVLYVMDVSEQCGHTLSQQLELFNN-IRPLFANKPLIV 286 Query: 277 GLSQIDTVDSDTLARKKNEL---ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 ++ D L+ + ++ T G E SS+T G+ Q+ D++ + R + Sbjct: 287 MANKCDVRKISELSEENQKIFADLTAEGVDVIETSSLTEEGVMQVKTEACDRLLTHRVDT 346 Query: 334 EF 335 + Sbjct: 347 KM 348 >gi|310828626|ref|YP_003960983.1| ferrous iron transport protein B [Eubacterium limosum KIST612] gi|308740360|gb|ADO38020.1| ferrous iron transport protein B [Eubacterium limosum KIST612] Length = 676 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 15/169 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA- 220 + ++G PN+GK+T S+T + + ++P T+ G +++ + L D+PGI A Sbjct: 5 VALVGNPNSGKTTLFNSLTGSNLYVGNWPGVTIEKKEGDLRDTASKITLVDLPGIYSLAP 64 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG- 277 + I R +E ++++I+ A +E N+ Q + KI I+G Sbjct: 65 YSMDEIVSRDFLLSEPPDLIINILDASNIERNLYLTTQL-----------MELKIPIIGV 113 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L+ +D V+ L L G E S+ G GI +++ + +K+ Sbjct: 114 LNMMDIVEKKGLKLDLQSLKKGFGFPFMEISAQKGIGIEALIKAVEEKL 162 >gi|219130227|ref|XP_002185271.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217403186|gb|EEC43140.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 373 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 1/83 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 IG++G P+ GKST L ++T + + A Y FTTL G +K + D+PGII+ A Sbjct: 71 IGLVGFPSVGKSTLLTTLTGTRSEAAAYEFTTLTCIPGTMKYKGARIQVLDLPGIIEGAA 130 Query: 222 QGAGIGDRFLKHTERTHVLLHIV 244 G G G + + T RT L+ +V Sbjct: 131 DGRGRGRQVIS-TARTCNLILVV 152 >gi|332992293|gb|AEF02348.1| GTP-binding protein Der [Alteromonas sp. SN2] Length = 481 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 11/161 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +T + +ADYP T G K ++FI+ D GI + Sbjct: 5 VALVGRPNVGKSTLFNRLTNTRDALVADYPGLTRDRKYGQAKFEQRQFIVVDTGGITGDE 64 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A + + L E V+L +V A + A Q I D + N KK+ +V + Sbjct: 65 EGIDAEMAQQSLLAIEEADVVLLLVDA-RAGLLPADQGIADHIRRLN----KKVFVVA-N 118 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++D +D D+ + A G V + ++ G G+ Q+L+ Sbjct: 119 KVDGIDGDS--ESADFYALGLGTVK-QIAAAHGRGVSQLLQ 156 >gi|262369205|ref|ZP_06062533.1| GTP-binding protein HflX [Acinetobacter johnsonii SH046] gi|262315273|gb|EEY96312.1| GTP-binding protein HflX [Acinetobacter johnsonii SH046] Length = 443 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 2/90 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++ ++ AD F TL P L ++ +G +LAD G + Sbjct: 198 IPTVSLVGYTNAGKSTLFNTLAKSDVYAADQLFATLDPTLRRLEWDGIGPLVLADTVGFV 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA 246 +N AH L+ T +LLH++ + Sbjct: 258 RNLAHALVESFKATLEETLEASLLLHVIDS 287 >gi|283455741|ref|YP_003360305.1| GTP-binding protein [Bifidobacterium dentium Bd1] gi|283102375|gb|ADB09481.1| GTP-binding protein, probable translation factor [Bifidobacterium dentium Bd1] Length = 348 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 17/90 (18%) Query: 178 SVTRAKPKIADYPFTTLYPNLGIV-----------KEGYKEFIL------ADIPGIIKNA 220 ++TR +YPF T+ PN GIV K + E I+ DI GI+K A Sbjct: 4 ALTRNNVLAENYPFATIEPNTGIVPLPDDRLPILAKLVHTEKIVPATVTFVDIAGIVKGA 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 +G G+G++FL + + +V A E++ Sbjct: 64 SEGEGLGNKFLANIREADAICEVVRAFEDD 93 >gi|307545953|ref|YP_003898432.1| GTP-binding protein HflX [Halomonas elongata DSM 2581] gi|307217977|emb|CBV43247.1| K03665 GTP-binding protein HflX [Halomonas elongata DSM 2581] Length = 438 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 5/125 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T ++ AD F TL P L ++ E +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNALTESRVYAADQLFATLDPTLRRLEVEDVGPVVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKI 273 ++ H+ L+ +L+H++ A + + + +LDE+ A + K + Sbjct: 258 RHLPHKLVEAFQATLQEAAEASLLVHVIDAADPDRDLNVTQVEEVLDEIGALDVPTLKVM 317 Query: 274 EIVGL 278 V L Sbjct: 318 NKVDL 322 >gi|288555745|ref|YP_003427680.1| Era/ThdF family GTP-binding protein [Bacillus pseudofirmus OF4] gi|288546905|gb|ADC50788.1| Era/ThdF family GTP-binding protein [Bacillus pseudofirmus OF4] Length = 303 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 25/176 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST L V K I +D P TT G+ + + D PGI K Sbjct: 13 VSIIGRPNVGKSTLLNYVIGQKIAIMSDKPQTTRNKIQGVYTSNESQVVFIDTPGIHKPK 72 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++L++V A E + + I++ L + + + Sbjct: 73 HK---LGDFMMKVAQNTLREVDLILYVVDA-GEAFGSGEEFIIERLKETKTPV-----FL 123 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEF------SSITGHGIPQILECLHDKI 326 +++ID V D L + + F+F S++ G +P ++E + D + Sbjct: 124 VINKIDKVQPDDLLG-----IIETYRTKFDFTEVIPVSALQGSNVPTLMEQIVDHL 174 >gi|262304209|gb|ACY44697.1| GTP-binding protein [Artemia salina] Length = 279 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 18/113 (15%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAY 265 + DI G++K AH+G G+G+ FL H + H+ A E++ V+ + D + Sbjct: 35 IVDIAGLVKGAHEGQGLGNAFLSHIRAVDAIFHLSRAFEDDDVTHVEGDVNPVRD-IEII 93 Query: 266 NSELRKKIEIVGLSQIDTVDS-------------DTLARKKNELATQCGQVPF 305 N ELR K E + Q+D ++ DTL + K+ L + + F Sbjct: 94 NEELRLKDEEYLMVQVDKMEKLVTRGDKKLKPEFDTLMKIKHILVDEKKHIRF 146 >gi|224044685|ref|XP_002193120.1| PREDICTED: GTP binding protein 4 [Taeniopygia guttata] Length = 631 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA ++ Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVEVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDVSEQC 261 >gi|56696948|ref|YP_167310.1| GTP-binding protein HflX [Ruegeria pomeroyi DSS-3] gi|56678685|gb|AAV95351.1| GTP-binding protein HflX [Ruegeria pomeroyi DSS-3] Length = 424 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 17/179 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + ++G NAGKST +T A+ D F TL P + +V E IL+D G I + Sbjct: 206 VALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVVLPDGPEVILSDTVGFISDL 265 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIV----SALEENVQAAYQCILDELSAYNSELRKKIEI 275 R L+ +++H+ +A EE + + IL L E R K E+ Sbjct: 266 PTELVAAFRATLEEVLAADLIVHVRDIHHAATEEQARDV-ETILASLGV--DEGRPKFEV 322 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFSIRGE 332 +++D +D D K+ L + + P F S++TG G+ +L + + + R E Sbjct: 323 --WNKVDLLDPD----KRAALRERTARDPSLFAVSAVTGEGLESLLTAIAEALAETRSE 375 >gi|255079214|ref|XP_002503187.1| predicted protein [Micromonas sp. RCC299] gi|226518453|gb|ACO64445.1| predicted protein [Micromonas sp. RCC299] Length = 675 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 5/96 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ VTRA ++ Y FTT +G Y + + D PGI+ Sbjct: 170 ILVCGYPNVGKSSFMNKVTRADVEVQPYAFTTKSIYVGHTDYKYLRWQVLDTPGILDRP- 228 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + +R + + H+ + + V A+ QC Sbjct: 229 ----LEERNTIEMQSITAMAHLRAVVLYIVDASEQC 260 >gi|83286229|ref|XP_730070.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23489658|gb|EAA21635.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 602 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI----LADIPGII 217 I IIG N GK++ L S+T +K KIA Y FTT NLG ++ I + D+PG+I Sbjct: 422 ISIIGCTNVGKTSILNSITNSKSKIASYNFTTKEFNLGHYSFLNQDDIFTAQIMDLPGLI 481 Query: 218 KNAHQGAGIGDRF 230 + I ++ Sbjct: 482 NRKEEKRNIMEKL 494 >gi|221632863|ref|YP_002522085.1| putative GTPase [Thermomicrobium roseum DSM 5159] gi|221155423|gb|ACM04550.1| putative GTPase of unknown function subfamily [Thermomicrobium roseum DSM 5159] Length = 424 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 87/207 (42%), Gaps = 41/207 (19%) Query: 147 GQEKIIWLKLKL------------------IADIGIIGLPNAGKSTFLASVTRAKPKIAD 188 +E+I W++ +L + I ++G NAGKST L ++T A AD Sbjct: 163 ARERIAWIRRQLEEVREHRARYRQRRRQNRLPVIALVGYTNAGKSTLLNALTGADVLAAD 222 Query: 189 YPFTTLYPNLGIVKEGYKEF-ILADIPGIIKNAHQGAGIGDR-FLKHTERTHVLLHIVSA 246 F TL P ++ + +L D G I R L+ H+LLH+V Sbjct: 223 KLFATLDPTTRRLRLSDSQVALLTDTVGFIHKLPTTLVAAFRATLEEILDAHLLLHVVDI 282 Query: 247 LEENV---QAAYQCILDELSAYNSELRKKIEIVGLSQID----TVDSDTLARKKNELATQ 299 AA + +L EL A + I L++ID T+D D LAR EL Sbjct: 283 THPKAAEQAAAVRQVLRELGAD-----RYPTITVLNKIDRLEPTIDPDRLAR---ELDIP 334 Query: 300 CGQVPFEFSSITGHGIPQILECLHDKI 326 V F S+ TG+G LE L D+I Sbjct: 335 TNAV-F-VSAATGYG----LETLRDRI 355 >gi|58376584|ref|XP_308713.2| AGAP007050-PA [Anopheles gambiae str. PEST] gi|55245807|gb|EAA03933.2| AGAP007050-PA [Anopheles gambiae str. PEST] Length = 652 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 16/168 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + + G PN GKS+FL VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 171 VIVCGFPNVGKSSFLNKVTRADVDVQPYAFTTKSLYVGHMDYKYLRWQVIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + +R + + + H+ + + + + QC I ++ ++S K + Sbjct: 230 ----LEERNVIEMQAITAMAHLRACIMYVMDVSEQCGHSIEEQAKLFDSIKPLFANKPLV 285 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQ----VP-FEFSSITGHGIPQI 318 + L++ D + D L K ++ + +P E S+ T G+ ++ Sbjct: 286 LVLNKTDVLKFDELPADKQQIIEALSEDREVIPILEMSTATEEGVMEV 333 >gi|315634028|ref|ZP_07889317.1| GTP-binding protein HflX [Aggregatibacter segnis ATCC 33393] gi|315477278|gb|EFU68021.1| GTP-binding protein HflX [Aggregatibacter segnis ATCC 33393] Length = 460 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 7/112 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L + + ILAD G + Sbjct: 230 IPTISLVGYTNAGKSTLFNLLTAANVYAADQLFATLDPTLRRLSLKDVGTTILADTVGFL 289 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSA 264 ++ H L+ T +LLH+V + EN++A Q +L+E+ A Sbjct: 290 RDLPHDLISAFKSTLQETTEAALLLHVVDCADPRKLENIEAVNQ-VLEEIGA 340 >gi|149908865|ref|ZP_01897525.1| GTP-binding protein EngA [Moritella sp. PE36] gi|149808139|gb|EDM68080.1| GTP-binding protein EngA [Moritella sp. PE36] Length = 493 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 13/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST +TR + +AD+P T G +EFI+ D G I Sbjct: 5 IALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANLAGREFIVVDTGG-INGD 63 Query: 221 HQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G A + D+ L E +L +V A + A Q I + L + +KK+ +V Sbjct: 64 EEGIDAKMADQSLLAIEEADAVLFMVDA-RAGLMVADQAIAEHL----RKQQKKVFLVA- 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 +++D +D D + LA G + ++ ++ G GI ++E Sbjct: 118 NKVDGLDGDVAVAEFYALA--LGDI-YQIAASQGRGINILIE 156 >gi|297796713|ref|XP_002866241.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata] gi|297312076|gb|EFH42500.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata] Length = 541 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 18/172 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + ++G NAGKST L +T A + F TL P V+ + KEF+L D G I+ Sbjct: 313 VSLVGYTNAGKSTLLNQLTGANVLAENRLFATLDPTTRRVQMQNGKEFLLTDTVGFIQKL 372 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIV 276 R L+ + +L+H+V L E A + ++ EL S + K +V Sbjct: 373 PTTLVAAFRATLEEIAESSLLVHVVDISHPLAEQQIEAVEKVMSELDV--SSIPK---LV 427 Query: 277 GLSQIDTVDSDTLARKKNELA--TQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++D VD + + E + T C S++TG G+ +H+K+ Sbjct: 428 VWNKVDRVDDPQKVKLEAEKSGDTIC------ISALTGEGLDDFCNAVHEKL 473 >gi|260799447|ref|XP_002594707.1| hypothetical protein BRAFLDRAFT_270047 [Branchiostoma floridae] gi|229279943|gb|EEN50718.1| hypothetical protein BRAFLDRAFT_270047 [Branchiostoma floridae] Length = 608 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 13/112 (11%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+F+ ++TRA ++ Y FTT +G Y + + D PGI+ ++ + Sbjct: 174 ICGFPNVGKSSFINTITRADVEVQPYAFTTKSLYVGHTDYRYLRWQVIDTPGILDHSLE- 232 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 ER + + ++AL +++AA ++D L +++E+ Sbjct: 233 -----------ERNTIEMQAITAL-AHLRAAVLYVMDISEQCGHNLHQQVEL 272 >gi|116750604|ref|YP_847291.1| small GTP-binding protein [Syntrophobacter fumaroxidans MPOB] gi|116699668|gb|ABK18856.1| small GTP-binding protein [Syntrophobacter fumaroxidans MPOB] Length = 532 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 16/144 (11%) Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPG 215 K I + I+G NAGKST L ++T + + D F TL P ++ E I+ D G Sbjct: 339 KDIPTVSIVGYTNAGKSTLLNTLTHSGVFVEDKLFATLDPTSRRLRFPRDFEVIVTDTVG 398 Query: 216 IIKNAHQGAGIGDRF---LKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSE 268 I++ Q + D F L+ + +LLH+V EE ++A + IL +L E Sbjct: 399 FIRDLPQ--DLLDAFAATLEELDDADLLLHVVDISNPHFEEQMEAVDR-ILGKL-----E 450 Query: 269 LRKKIEIVGLSQIDTVDSDTLARK 292 L+ K ++ ++ID VD + RK Sbjct: 451 LQAKPTVLVFNKIDRVDPEWARRK 474 >gi|88798920|ref|ZP_01114502.1| GTPase [Reinekea sp. MED297] gi|88778400|gb|EAR09593.1| GTPase [Reinekea sp. MED297] Length = 436 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 11/173 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST +T + AD F TL P L + + +LAD G I++ Sbjct: 201 VSLVGYTNAGKSTLFNYLTDSGVYAADQLFATLDPTLRRLAIPDMGDIVLADTVGFIRHL 260 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H+ L+ T +LLH+V +E+ + + + L S ++E+ + Sbjct: 261 PHKLVEAFKATLQETAEADLLLHVVDCADEDRLGNIEQVENVLDEIGSSDIPRLEV--FN 318 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL----ECLHDKIFS 328 +ID +D A ++N+ + V S+ TG G IL E L D++ S Sbjct: 319 KIDLLDDFEPAIERND---EGIPVRVWVSAKTGQGAALILAALTELLGDEVIS 368 >gi|331701380|ref|YP_004398339.1| GTP-binding protein Era-like-protein [Lactobacillus buchneri NRRL B-30929] gi|329128723|gb|AEB73276.1| GTP-binding protein Era-like-protein [Lactobacillus buchneri NRRL B-30929] Length = 300 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 15/167 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I+G PN GKSTFL V K I +D P TT G+ + + D PGI K Sbjct: 11 IAIVGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTKEAQIVFIDTPGIHKPQ 70 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 ++ G + + L + +L +V+A E A I+D+L + + + ++ Sbjct: 71 NKLGDFMMESALSALKEVDAVLFMVNATEHR-GAGDNFIIDQLKNVDKPIY-----LLIN 124 Query: 280 QIDTVDSDTLA----RKKNELATQCGQVPFEFSSITGHGIPQILECL 322 +ID + D + + KN L + + S++ G+ +P++++ L Sbjct: 125 KIDEISPDDIMPIIEQYKNALEFKDV---YPISALQGNNVPELIDTL 168 >gi|218288620|ref|ZP_03492897.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius LAA1] gi|218241277|gb|EED08452.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius LAA1] Length = 298 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 14/171 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PN GKST L ++ K I ++ P TT G+ + I D PGI K Sbjct: 8 VALIGRPNVGKSTLLNALVGQKVAIMSNRPQTTRNRIRGVRTTETSQMIFIDTPGIHKPK 67 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H+ G + D LK V++ +V A + +E++ +R + I+ L+ Sbjct: 68 HRLGEYMVDAALKTLNEVDVIVLVVDA-----SSPVHPTEEEIAKQLERVRTPV-ILALN 121 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHDKI 326 ++D +D L K+ E PFE S++ G + + E + ++ Sbjct: 122 KVDALDDRALVLKRIEEYQALR--PFEEYVPISALKGEQVDLLAELIERRL 170 >gi|83593186|ref|YP_426938.1| GTP-binding protein Era [Rhodospirillum rubrum ATCC 11170] gi|83576100|gb|ABC22651.1| GTP-binding protein Era [Rhodospirillum rubrum ATCC 11170] Length = 309 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 27/177 (15%) Query: 162 IGIIGLPNAGKSTFL-----ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + +IG PNAGKST + + VT PK+ TT GI G + + D PGI Sbjct: 20 VAVIGAPNAGKSTLVNRLVGSKVTIVSPKVQ----TTRSRVRGIAMVGEAQVVFVDTPGI 75 Query: 217 I--KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 + A + + E VLL I + + + A + IL +L A + Sbjct: 76 FQPRKRFDRAMVAAAWEGALEADLVLLVIDA--HKGITAEVEEILTKLKATG-----RRA 128 Query: 275 IVGLSQIDTVDSDTLARKKNELATQC-GQVPFE----FSSITGHGIPQILECLHDKI 326 ++ L+++D ++ L E+A++ +PFE S++TG G +L L +++ Sbjct: 129 LLALNKVDALERSRLL----EMASRLDAALPFEKVFMISALTGSGCDDVLAWLAERV 181 >gi|50548785|ref|XP_501862.1| YALI0C15290p [Yarrowia lipolytica] gi|49647729|emb|CAG82175.1| YALI0C15290p [Yarrowia lipolytica] Length = 444 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 18/105 (17%) Query: 163 GIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK----- 206 GI+GL N GKS+ +++++ A+YPF T+ P V + YK Sbjct: 64 GIVGLANVGKSSIFQAISKSHLGNPANYPFATIDPEEARVIVPSDRFDKLCDVYKPENAV 123 Query: 207 --EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 L DI G++K A +G G+G+ FL + L +V A ++ Sbjct: 124 PATLTLFDIAGLVKGASKGEGLGNAFLANIRAVDGLFQVVRAFDD 168 >gi|304311745|ref|YP_003811343.1| GTP-binding protein HflX [gamma proteobacterium HdN1] gi|301797478|emb|CBL45698.1| GTP-binding protein HflX [gamma proteobacterium HdN1] Length = 430 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 2/93 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 + + ++G NAGKST ++TR+ AD F TL P L I +LAD G I Sbjct: 199 VPTVSLVGYTNAGKSTLFNAMTRSDVYAADQLFATLDPTLRRIPIPDVGPIVLADTVGFI 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 ++ H+ L+ + + +LLH+V A E Sbjct: 259 RHLPHKLVESFRATLEESRESDLLLHVVDACSE 291 >gi|260578662|ref|ZP_05846570.1| ribosome-associated GTPase EngA [Corynebacterium jeikeium ATCC 43734] gi|258603159|gb|EEW16428.1| ribosome-associated GTPase EngA [Corynebacterium jeikeium ATCC 43734] Length = 777 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 25/178 (14%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKS+ L +T + + + TT+ P IV+ K + D GI K Sbjct: 518 VALVGRPNVGKSSLLNKITGEERSVVNNVAGTTVDPVDSIVELEEKTWKFVDTAGIRKKT 577 Query: 221 HQGAG----IGDRFLKHTERTHVLLHIVSALE---ENVQAAYQCILDELSAYNSELRKKI 273 Q G R + V++ +V A E E Q + ILD A Sbjct: 578 KQARGHEFYASLRTRSAIDAAEVVVFLVDASEPIAEQDQRVLRMILDSGRAL-------- 629 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPF----EFSSITGHGI----PQILECLH 323 +V ++ D VD D + E+ Q VP+ S+ TG + P ++E L Sbjct: 630 -VVAYNKWDLVDEDRRDLLEREIELQLSHVPWARRVNISAKTGRALQKLEPAMIEALE 686 >gi|225163906|ref|ZP_03726198.1| GTP-binding protein HflX [Opitutaceae bacterium TAV2] gi|224801483|gb|EEG19787.1| GTP-binding protein HflX [Opitutaceae bacterium TAV2] Length = 428 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 14/165 (8%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNAH 221 I+G NAGKS+ L ++T A D F TL P ++ G ++ ++ D G I+ Sbjct: 212 AIVGYTNAGKSSLLNTLTGAAVLAEDKLFATLDPTTRQLLLRGNQKLLVTDTVGFIRRLP 271 Query: 222 QGAGIGDRFLKHTERTHV---LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 G+ + F E V L+H++ NV A + L L ++ ++ + + Sbjct: 272 H--GLVEAFKATLEEAIVADFLIHVLDVTAPNVAAHHATTLSVLKELGADEKRILTV--F 327 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE-CL 322 ++ D D LAR A Q + S+ TG G+P +++ CL Sbjct: 328 NKTDAADEPHLAR-----ARQLDRNGIFVSARTGDGLPALVDHCL 367 >gi|110633305|ref|YP_673513.1| GTP-binding protein Era [Mesorhizobium sp. BNC1] gi|110284289|gb|ABG62348.1| GTP-binding protein Era [Chelativorans sp. BNC1] Length = 305 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 21/174 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST L + AK I + TT GI + + D PGI K Sbjct: 16 VALIGAPNAGKSTLLNQLVGAKVSIVTHKVQTTRALVRGIATRDRTQIVFVDTPGIFKPR 75 Query: 221 HQGAGIGDRFLKHT-----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + DR + T + ++ ++ A E ++ + ILD L SE+R+ +I Sbjct: 76 RR----LDRAMVTTAWGGAKDADIVAFLLDA-ERGIRGDAETILDNL----SEVRQP-KI 125 Query: 276 VGLSQIDTVDSD---TLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + L+++D + D LA + NE + F S++TG G +L L + + Sbjct: 126 LILNKVDRIKRDKLLVLAAEANERVS--FDRTFMISALTGDGCDDLLGYLAEAL 177 >gi|323126738|gb|ADX24035.1| GTP-binding protein Era [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 259 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 7 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHK-- 64 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 65 -PKTALGDFMVESAYSTLREVETVLFMVPA-DEKRGKGDDMIIERLKAAKIPV-----IL 117 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ +P +++ L D + Sbjct: 118 VINKIDKVHPDQLLEQIDDFRSQMDFKEVVP--ISALEGNNVPTLIKLLTDNL 168 >gi|213510936|ref|NP_001133888.1| noggin-1 [Salmo salar] gi|209155700|gb|ACI34082.1| Nucleolar GTP-binding protein 1 [Salmo salar] Length = 636 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA ++ Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVEVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + +R + L H+ SA+ + + QC Sbjct: 230 --LEERNTIEMQAITALAHLRSAVLYVMDVSEQC 261 >gi|169832185|ref|YP_001718167.1| GTP-binding protein Era [Candidatus Desulforudis audaxviator MP104C] gi|169639029|gb|ACA60535.1| GTP-binding protein Era [Candidatus Desulforudis audaxviator MP104C] Length = 308 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST L S+ R I+D P TT + ++ + + D PGI K Sbjct: 19 VTIIGRPNVGKSTLLNSLVGRKVAIISDKPQTTRHRIRAVLTRDDAQVVFVDTPGIHKPK 78 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEEN 250 H+ G + D LK + ++L ++ A E+ Sbjct: 79 HRLGRMMVDTALKTLQDVDLILFLIEAHRES 109 >gi|57530676|ref|NP_001006354.1| nucleolar GTP-binding protein 1 [Gallus gallus] gi|53127792|emb|CAG31225.1| hypothetical protein RCJMB04_3g12 [Gallus gallus] Length = 631 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA ++ Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVEVQPYAFTTKSLFVGHMDYRYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDVSEQC 261 >gi|76363849|sp|P0C0C0|ERA_STRP9 RecName: Full=GTPase Era gi|6456490|gb|AAF09161.1|U31915_1 GTP-binding protein homolog [Streptococcus pyogenes] Length = 203 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 7 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHK-- 64 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 65 -PKTALGDFMVESAYSTLREVETVLFMVPA-DEKRGKGDDMIIERLKAAKIPV-----IL 117 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ +P +++ L D + Sbjct: 118 VINKIDKVHPDQLLEQIDDFRSQMDFKEVVP--ISALEGNNVPNLIKLLTDNL 168 >gi|170754394|ref|YP_001780660.1| ferrous iron transport protein B [Clostridium botulinum B1 str. Okra] gi|169119606|gb|ACA43442.1| ferrous iron transport protein B [Clostridium botulinum B1 str. Okra] Length = 718 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I ++G PN GK+T +T + + ++P T+ G +K+ +K+ + D+PGI + Sbjct: 6 IALVGNPNCGKTTMFNYLTGSSQYVGNWPGVTVEKKEGKLKQ-HKDVKVIDLPGIYSLSP 64 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R TE+ V+++IV + LE N+ + Q + EL + I+ L Sbjct: 65 YTLEEVITRNYLITEKPEVIINIVDGTNLERNLYLSTQVM---------ELGIPV-IIAL 114 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V + K++L+ G E S++ G G ++++ Sbjct: 115 NMMDIVRKNGDIIDKDKLSKSMGCTVVETSALKGEGCKELID 156 >gi|153941368|ref|YP_001390383.1| ferrous iron transport protein B [Clostridium botulinum F str. Langeland] gi|152937264|gb|ABS42762.1| ferrous iron transport protein B [Clostridium botulinum F str. Langeland] gi|295318471|gb|ADF98848.1| ferrous iron transport protein B [Clostridium botulinum F str. 230613] Length = 718 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I ++G PN GK+T +T + + ++P T+ G +K+ +K+ + D+PGI + Sbjct: 6 IALVGNPNCGKTTMFNYLTGSSQYVGNWPGVTVEKKEGKLKQ-HKDVKVIDLPGIYSLSP 64 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R TE+ V+++IV + LE N+ + Q + EL + I+ L Sbjct: 65 YTLEEVITRNYLITEKPEVIINIVDGTNLERNLYLSTQVM---------ELGIPV-IIAL 114 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V + K++L+ G E S++ G G ++++ Sbjct: 115 NMMDIVRKNGDIIDKDKLSKSMGCTVVETSALKGEGCKELID 156 >gi|303283826|ref|XP_003061204.1| predicted protein [Micromonas pusilla CCMP1545] gi|226457555|gb|EEH54854.1| predicted protein [Micromonas pusilla CCMP1545] Length = 679 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 5/96 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ VTRA ++ Y FTT +G Y + + D PGI+ Sbjct: 173 ILVCGYPNVGKSSFMNKVTRADVEVQPYAFTTKSIYVGHTDYKYLRWQVLDTPGILDRP- 231 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + +R + + H+ + + V A+ QC Sbjct: 232 ----LEERNTIEMQSITAMAHLRAVVLYIVDASEQC 263 >gi|303390376|ref|XP_003073419.1| developmentally regulated GTP binding protein [Encephalitozoon intestinalis ATCC 50506] gi|303302565|gb|ADM12059.1| developmentally regulated GTP binding protein [Encephalitozoon intestinalis ATCC 50506] Length = 362 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 43/85 (50%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + +IG P+ GKST L+ +T K A++ FTTL G + + D+PGI+ Sbjct: 62 ARVVLIGFPSVGKSTLLSKITGTHSKAAEHEFTTLDCISGKMCLNDTWIQVLDLPGIVSG 121 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV 244 A Q G G + + ++L ++ Sbjct: 122 AAQNRGRGRQVISVARTADLILMVL 146 >gi|254421821|ref|ZP_05035539.1| ferrous iron transport protein B [Synechococcus sp. PCC 7335] gi|196189310|gb|EDX84274.1| ferrous iron transport protein B [Synechococcus sp. PCC 7335] Length = 789 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 19/162 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK--- 218 I ++G PN GK+T ++T A ++ ++P T+ G + G + D+PG+ Sbjct: 15 IALVGNPNCGKTTLFNALTGANQRVGNWPGVTVERKEGRYQYGNTTVTVVDLPGVYSLDA 74 Query: 219 NAHQGA---GIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKI 273 + H+G I ++L + + V+++IV A LE N+ Q ILD ++ Sbjct: 75 DEHEGGLDEAIACKYLM-SNQAQVIVNIVDAANLERNLYLTSQ-ILD---------MERP 123 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 IV L+ +D + +LA + G + G G+ Sbjct: 124 LIVALNMMDVAKEHNVCIDTEQLAARLGCPVIPLVASRGWGV 165 >gi|288920757|ref|ZP_06415057.1| GTP-binding proten HflX [Frankia sp. EUN1f] gi|288347833|gb|EFC82110.1| GTP-binding proten HflX [Frankia sp. EUN1f] Length = 502 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 17/171 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGIIKN 219 + I G NAGKS+ L +T A + D F TL P + + +G + F LAD G +++ Sbjct: 280 VAIAGYTNAGKSSLLNRLTGAGVLVEDALFATLDPTVRRATLPDG-RVFTLADTVGFVRH 338 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQ-AAYQCILDELSAYNSELRKKIEI 275 HQ L+ ++LH+V SA + Q A + +L E+ A E+ Sbjct: 339 LPHQIVEAFRSTLEEVVDADLVLHVVDGSAPDPMGQITAVREVLAEIDAAGVP-----EL 393 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 V ++++D VD TLA + + S+ +G G+ ++++ L ++I Sbjct: 394 VVVNKVDAVDPTTLAVLRKAVPDAIF-----VSARSGTGLAELVDALSERI 439 >gi|146097939|ref|XP_001468268.1| nucleolar GTP-binding protein [Leishmania infantum] gi|134072635|emb|CAM71350.1| putative nucleolar GTP-binding protein [Leishmania infantum JPCM5] Length = 652 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 32/57 (56%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + G PN GKS+F+ VTRA ++ Y FTT +G Y + + D PGI+ ++ Sbjct: 174 VTGFPNVGKSSFMNKVTRADVEVQPYAFTTKSLFVGHTDYKYTTWQVIDTPGILDHS 230 >gi|269978124|ref|ZP_06185074.1| GTP-binding protein HflX [Mobiluncus mulieris 28-1] gi|306818496|ref|ZP_07452219.1| GTP-binding protein [Mobiluncus mulieris ATCC 35239] gi|307700778|ref|ZP_07637803.1| GTP-binding protein HflX [Mobiluncus mulieris FB024-16] gi|269933633|gb|EEZ90217.1| GTP-binding protein HflX [Mobiluncus mulieris 28-1] gi|304648669|gb|EFM45971.1| GTP-binding protein [Mobiluncus mulieris ATCC 35239] gi|307613773|gb|EFN93017.1| GTP-binding protein HflX [Mobiluncus mulieris FB024-16] Length = 513 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 8/170 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I+G NAGKS+ L + A + D F TL P++ + + LAD G + Sbjct: 261 VPAVAIVGYTNAGKSSLLNRLAGADVLVHDALFATLDPSVRKTHTATGRVYTLADTVGFV 320 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + Q L+ T +LLH+V A + + + L S +R ++ Sbjct: 321 RRLPTQLVEAFRSTLEETAMADLLLHVVDAANPDPMGEIEAVNATLDTIES-IRHTPVVM 379 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++++D + TLA + L E S+ +G GI ++ E + ++ Sbjct: 380 VINKVDAASAPTLALLRRLLPEAV-----EVSARSGQGIERLQEVIASRL 424 >gi|241662761|ref|YP_002981121.1| GTP-binding proten HflX [Ralstonia pickettii 12D] gi|240864788|gb|ACS62449.1| GTP-binding proten HflX [Ralstonia pickettii 12D] Length = 417 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 12/175 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST ++T+A+ A+ F TL + + EG +L+D G I++ Sbjct: 204 VSLVGYTNAGKSTLFNALTKARAYAANQLFATLDTTSRRLYLEGLGNVVLSDTVGFIRDL 263 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV---SALEENVQAAYQCILDELSAYNSELRKKIEIV 276 Q L+ T VLLH+V S ++ +LDE+ A +I+ Sbjct: 264 PTQLVAAFRATLEETVHADVLLHVVDAASTVKHEQMEQVDRVLDEIDASGIP-----QIL 318 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILECLHDKIFSIR 330 +++ID + +A + E + G V F S+I G G+ + E L + +R Sbjct: 319 VMNKIDAAEELRVAGPRIE-RDETGAVRRVFVSAIEGTGLDLLREALVETAIRLR 372 >gi|219853110|ref|YP_002467542.1| small GTP-binding protein [Methanosphaerula palustris E1-9c] gi|219547369|gb|ACL17819.1| small GTP-binding protein [Methanosphaerula palustris E1-9c] Length = 370 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 37/72 (51%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 A + ++G P+ GKST L +T K ++ Y FTTL G + + + DIPG+I Sbjct: 64 ATVVLVGFPSVGKSTLLNKLTGTKSEVGAYAFTTLTVVPGSMDYKGAKIQILDIPGLIAG 123 Query: 220 AHQGAGIGDRFL 231 A G G G + Sbjct: 124 AAMGRGRGKEVI 135 >gi|157875083|ref|XP_001685947.1| nucleolar GTP-binding protein [Leishmania major strain Friedlin] gi|68129020|emb|CAJ06481.1| putative nucleolar GTP-binding protein [Leishmania major strain Friedlin] Length = 652 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 32/57 (56%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + G PN GKS+F+ VTRA ++ Y FTT +G Y + + D PGI+ ++ Sbjct: 174 VTGFPNVGKSSFMNKVTRADVEVQPYAFTTKSLFVGHTDYKYTTWQVIDTPGILDHS 230 >gi|316967987|gb|EFV52331.1| spo0B-associated GTP-binding protein [Trichinella spiralis] Length = 485 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 81/161 (50%), Gaps = 3/161 (1%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDFRYQ 62 F+D V G+GG G I+F GP GG GG GG V QA S+L +L + Sbjct: 84 FVDFKTVRTIGGNGGDGMIAFLSLYRNSRAGPSGGDGGNGGHVIFQADSSLTSLA--KVP 141 Query: 63 QHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEED-GISLICDLDQEGQRIILAPGG 121 + +A+ GE G ++ GA + +P GT E G +L G+ I A GG Sbjct: 142 RVIRARAGENGRGKSCHGASANHFCVRIPTGTVCRREAAGTGDEVELKNHGEIFIAARGG 201 Query: 122 NGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADI 162 GG GN F S+T QAP A G G++ + L+L+L+AD+ Sbjct: 202 AGGRGNQSFVSATWQAPTIAEAGGRGEDIVYQLELRLLADV 242 >gi|288559650|ref|YP_003423136.1| GTP-binding protein [Methanobrevibacter ruminantium M1] gi|288542360|gb|ADC46244.1| GTP-binding protein [Methanobrevibacter ruminantium M1] Length = 364 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 33/54 (61%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 ++G P+ GKST L +T A+ K+ Y FTTL G+++ + + DIPGII Sbjct: 66 LVGFPSVGKSTLLNEITNAESKVGAYQFTTLEIIPGVMEYNNAQIQIFDIPGII 119 >gi|255658317|ref|ZP_05403726.1| putative GTP-binding protein HflX [Mitsuokella multacida DSM 20544] gi|260849636|gb|EEX69643.1| putative GTP-binding protein HflX [Mitsuokella multacida DSM 20544] Length = 615 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 56/130 (43%), Gaps = 18/130 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGII-KN 219 + ++G NAGKST L +T A+ D F TL P +V +E +L D G I K Sbjct: 383 VALVGYTNAGKSTLLNKLTGAEVFAEDKLFATLDPTTRHLVLPEKQEILLTDTVGFIQKL 442 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H L+ + +LLH+V EN Y ++ +E+ L Sbjct: 443 PHTLVKAFRATLEEVQEADLLLHVVDCSNEN--------------YEQQIESVVEV--LK 486 Query: 280 QIDTVDSDTL 289 ++D VD TL Sbjct: 487 ELDAVDKPTL 496 >gi|322502256|emb|CBZ37340.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 652 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 32/57 (56%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + G PN GKS+F+ VTRA ++ Y FTT +G Y + + D PGI+ ++ Sbjct: 174 VTGFPNVGKSSFMNKVTRADVEVQPYAFTTKSLFVGHTDYKYTTWQVIDTPGILDHS 230 >gi|326402426|ref|YP_004282507.1| GTP-binding protein Era [Acidiphilium multivorum AIU301] gi|325049287|dbj|BAJ79625.1| GTP-binding protein Era [Acidiphilium multivorum AIU301] Length = 295 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 72/173 (41%), Gaps = 27/173 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PNAGKST L AK I TT + GIV G + +L D PGI Sbjct: 8 VALLGRPNAGKSTLLNQAVGAKVSIVTPKAQTTRFRISGIVMRGGDQIVLVDTPGIFAPK 67 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC-ILDELSAYNSELRKKIEIVG-- 277 + DR + + +A E A C I+D A +L + IE + Sbjct: 68 RR----LDRAM-----------VAAAWEGVAGADLACLIVDAAKADPDDLAEPIEALAAT 112 Query: 278 -------LSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECL 322 L++ID + D L LA Q G F S++ G+ ++L+ L Sbjct: 113 GRPRWLILNKIDLLPRDKLLPLAETLARQGGFAEVFMISALKRDGVDRLLDAL 165 >gi|322494688|emb|CBZ29991.1| putative nucleolar GTP-binding protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 652 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 32/57 (56%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + G PN GKS+F+ VTRA ++ Y FTT +G Y + + D PGI+ ++ Sbjct: 174 VTGFPNVGKSSFMNKVTRADVEVQPYAFTTKSLFVGHTDYKYTTWQVIDTPGILDHS 230 >gi|254517950|ref|ZP_05130006.1| ferrous iron transporter B [Clostridium sp. 7_2_43FAA] gi|226911699|gb|EEH96900.1| ferrous iron transporter B [Clostridium sp. 7_2_43FAA] Length = 626 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 18/162 (11%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IK 218 ++ ++G PN GK+T ++T +K + ++P T+ G + + K L D+PGI + Sbjct: 3 NVALVGNPNTGKTTVFNALTGSKQYVGNWPGVTIDKKFGFINKDMK---LVDLPGIYAMD 59 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIV 276 I FL++ E V++++V + LE N+ Q L +N + +V Sbjct: 60 TYSNEEKIARAFLEY-EDVDVIINVVDSINLERNLYLTTQ-----LMQFNKPI-----VV 108 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 L+ ID + N+LA + G S+ T G+ I Sbjct: 109 LLNMIDIAKKRGINIDHNKLAKELGVTILPISAKTKEGLDNI 150 >gi|225627584|ref|ZP_03785621.1| GTP-binding proten HflX [Brucella ceti str. Cudo] gi|225617589|gb|EEH14634.1| GTP-binding proten HflX [Brucella ceti str. Cudo] Length = 505 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 268 VALVGYTNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNL 327 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ ++LH+ + + A + + + L+ E + +V + Sbjct: 328 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 387 Query: 279 SQIDTVDSDTLARKKNELA--TQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A ++ G+ P S+ITG G+ ++L + +I Sbjct: 388 NKIDNLDESAREAALRLAAAGSEEGR-PIPVSAITGEGVDRLLSLIETRI 436 >gi|145224541|ref|YP_001135219.1| GTP-binding protein, HSR1-related [Mycobacterium gilvum PYR-GCK] gi|145217027|gb|ABP46431.1| GTP-binding protein, HSR1-related protein [Mycobacterium gilvum PYR-GCK] Length = 482 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 12/146 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I+G NAGKS+ L ++T A + + F TL P G + +G +EF+L D G Sbjct: 258 VPSVTIVGYTNAGKSSLLNALTGAGVLVENALFATLEPTTRRGELSDG-REFVLTDTVGF 316 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELR 270 ++ H + + F L+ +LLH+V + N A A + +++E+ A ++ Sbjct: 317 VR--HLPTQLVEAFRSTLEEVVDAELLLHVVDGSDANPLAQINAVRTVVNEVVA-ETDAT 373 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNEL 296 E++ +++ID D LA+ + L Sbjct: 374 APPELLVVNKIDAADGLVLAQLRQAL 399 >gi|308811126|ref|XP_003082871.1| GTP-binding protein-like (ISS) [Ostreococcus tauri] gi|116054749|emb|CAL56826.1| GTP-binding protein-like (ISS) [Ostreococcus tauri] Length = 413 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI-IKN 219 + I+G PNAGKST + + K I + P TT + LGIV E + +L D PG+ ++ Sbjct: 115 VAIVGRPNAGKSTLMNDLVGTKLSIVTFKPQTTRHRILGIVSEDAYQMVLLDTPGVMVEE 174 Query: 220 AHQGAGIGDRFLKHT-ERTHVLLHIVSA 246 ++ GI + ++++ V+ +IV A Sbjct: 175 FNKLDGIMLKSVRNSMANADVMFYIVDA 202 >gi|296121964|ref|YP_003629742.1| GTP-binding proten HflX [Planctomyces limnophilus DSM 3776] gi|296014304|gb|ADG67543.1| GTP-binding proten HflX [Planctomyces limnophilus DSM 3776] Length = 464 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 8/169 (4%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIK 218 A + ++G NAGKST + ++T + IAD F TL + K G+ + +L+D G ++ Sbjct: 230 ALVSLVGYTNAGKSTLMRALTGEEVYIADQLFATLDTKTRLWKIPGWGDALLSDTVGFVR 289 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + H L+ +LLH+V A +A + L EL+ I + Sbjct: 290 DLPHSLVASFKSTLEEARHADLLLHVVDASNPEAEAQVATVEAVLEEIGVELKNFILV-- 347 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L++ D V R +L + S+ TG G+ ++ + + D++ Sbjct: 348 LNKADQVPD----RMALDLLRARYEWSVSISARTGDGLDRLAQLVVDRL 392 >gi|19173619|ref|NP_597422.1| similarity to HYPOTHETICAL GTP-BINDING PROTEINS OF THE GTPI/OBG FAMILY [Encephalitozoon cuniculi GB-M1] gi|52783208|sp|Q8SVJ8|NOG1_ENCCU RecName: Full=Nucleolar GTP-binding protein 1 gi|19170825|emb|CAD26599.1| similarity to HYPOTHETICAL GTP-BINDING PROTEINS OF THE GTPI/OBG FAMILY [Encephalitozoon cuniculi GB-M1] Length = 528 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 32/54 (59%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + G PN GKS+F+ ++RA ++ YPFTT +G Y ++ + D PGI+ Sbjct: 172 VCGFPNVGKSSFVRKISRADVEVQPYPFTTKSLYVGHFDYKYLQWQVIDTPGIL 225 >gi|295092241|emb|CBK78348.1| GTP-binding protein HflX [Clostridium cf. saccharolyticum K10] Length = 417 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 67/163 (41%), Gaps = 12/163 (7%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKN- 219 I+G NAGKST L +T A D F TL P ++ G K +L D G I+ Sbjct: 205 AIVGYTNAGKSTLLNYLTDAGILAQDMLFATLDPTTRTLELPSGQK-ILLTDTVGFIRKL 263 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H L+ + ++LH+V ++ + + L E+ K I + Sbjct: 264 PHHLIEAFKSTLEEARYSDIILHVVDVSNPQMETQIHIVYETLRQL--EITDKTVITVFN 321 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 ++D + D + R + S+ TG GIP +LE L Sbjct: 322 KMDRLTGDVILRDFR------SDFQVKISAKTGEGIPALLETL 358 >gi|251781922|ref|YP_002996224.1| GTP-binding protein Era [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390551|dbj|BAH81010.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 298 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 7 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHK-- 64 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 65 -PKTALGDFMVESAYSTLREVETVLFMVPA-DEKRGKGDDMIIERLKAAKIPV-----IL 117 Query: 277 GLSQIDTVDSDTLARKKNELATQC---GQVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ +P +++ L D + Sbjct: 118 VINKIDKVHPDQLLAQIDDFRSQMEFKEVVP--ISALEGNNVPTLIKLLTDNL 168 >gi|94993785|ref|YP_601883.1| GTP-binding protein Era [Streptococcus pyogenes MGAS10750] gi|189037676|sp|Q1J822|ERA_STRPF RecName: Full=GTPase Era gi|94547293|gb|ABF37339.1| GTP-binding protein era [Streptococcus pyogenes MGAS10750] Length = 298 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 7 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHKPK 66 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 67 ---TALGDFMVESAYSTLREVETVLFMVPA-DEKRGKGDDMIIERLKAAKIPV-----IL 117 Query: 277 GLSQIDTVDSDTLARKKNELATQC---GQVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ +P +++ L D + Sbjct: 118 VINKIDKVHPDQLLAQIDDFRSQMEFKEVVP--ISALEGNNVPTLIKLLTDNL 168 >gi|328543512|ref|YP_004303621.1| GTP-binding protein Era [polymorphum gilvum SL003B-26A1] gi|326413256|gb|ADZ70319.1| GTP-binding protein Era [Polymorphum gilvum SL003B-26A1] Length = 318 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I +IG PNAGKST L + K I + TT GI G + + D PGI + Sbjct: 29 IALIGAPNAGKSTLLNQLVGTKVSIVTHKVQTTRAIVRGIAMHGSAQLVFVDTPGIFQPK 88 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + DR + T R ++ ++ + + + ILD L ++LR ++ Sbjct: 89 RR----LDRAMVDTAWGGARDADVIALLIDARKGLSEEVETILDRL----ADLRGP-RVL 139 Query: 277 GLSQIDTVDSD---TLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L++ID + TLA+ NE + F S++TG G+ +L+ K+ Sbjct: 140 ILNKIDVARREKLLTLAQAANERV--AFERTFMVSALTGDGVADMLDYFATKV 190 >gi|291567007|dbj|BAI89279.1| GTP-binding protein [Arthrospira platensis NIES-39] Length = 511 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 13/146 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGI---VKEGYKEFILAD 212 + + I+G NAGKST L +T ++ AD F TL P L I V E + ++ D Sbjct: 337 VPTLAIVGYTNAGKSTLLNVLTASEIYAADQLFATLDPTSRRLTIPDAVTEEPQNIVITD 396 Query: 213 IPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 G I + D F L+ VLLH+V QA Q +++ L+ + Sbjct: 397 TVGFIHELP--PALIDAFRATLEEVTDADVLLHLVDLSHPAWQAQIQSVMEILT--QMPI 452 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNE 295 ++ ++ID+VD +TL + E Sbjct: 453 TPGPALLAFNKIDSVDGETLRFAQEE 478 >gi|15643293|ref|NP_228337.1| hypothetical protein TM0527 [Thermotoga maritima MSB8] gi|4981040|gb|AAD35612.1|AE001728_13 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 406 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 7/114 (6%) Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFIL-ADIPG 215 K I + I+G NAGKST L +T + +AD F TL P +K IL +D G Sbjct: 184 KKIPHVSIVGYTNAGKSTLLKVLTDSDVYVADKLFATLEPVTRRLKLKSGRVILVSDTVG 243 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSA 264 I+ H L+ + + VL+H+V A LEE ++A+ + +L+E+ A Sbjct: 244 FIRKLPHTIVSAFKATLEEIKYSDVLIHLVDASDPYLEEKMKAS-EKVLEEIGA 296 >gi|299136416|ref|ZP_07029599.1| GTP-binding proten HflX [Acidobacterium sp. MP5ACTX8] gi|298600931|gb|EFI57086.1| GTP-binding proten HflX [Acidobacterium sp. MP5ACTX8] Length = 485 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 22/176 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 + + ++G NAGKST S+T A+ ++ F TL P L + ++ +L+D G + Sbjct: 261 VPTVALVGYTNAGKSTLFNSLTGAEVLASERMFATLDPKLRQLTLPSRRKVLLSDTVGFL 320 Query: 218 KNAHQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +N R L+ ER +LLH V+ A LD E R ++E V Sbjct: 321 RNLPHALVTSFRATLEEVERAELLLH--------VRDAASPTLD-------EQRSQVEAV 365 Query: 277 GLSQIDTVDSDTLA--RKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFS 328 LS+++ + TL K + L + P S +TG G+ +L + + S Sbjct: 366 -LSELNVGEKQTLQVLNKTDLLPPETPFAPGTIPVSGLTGAGLDDLLHAIDAALTS 420 >gi|254293935|ref|YP_003059958.1| GTP-binding protein Era [Hirschia baltica ATCC 49814] gi|254042466|gb|ACT59261.1| GTP-binding protein Era [Hirschia baltica ATCC 49814] Length = 331 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 21/177 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI---- 216 + +IG PNAGKST + + AK I + TT + G++ G + +L D PGI Sbjct: 28 VAVIGSPNAGKSTLVNRLVGAKVSIVTHKVQTTRFQVRGVMMRGDAQVVLVDTPGIFAPK 87 Query: 217 -------IKNAHQGAGIGDR---FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN 266 +K+A GA D+ + + R+H + V+ ++ Q I+D+L A Sbjct: 88 HRLDRAMVKSAWDGAEGADQIIHLVDASSRSHKIDDKVTGADKKTIIDDQRIIDDLKASG 147 Query: 267 SELRKKIEIVGLSQIDTVDSDTLARKKNELATQ-CGQVPFEFSSITGHGIPQILECL 322 + I+ L++ID D + L EL + F S + G G+ Q+ + + Sbjct: 148 RK-----AILALNKIDLFDREDLIPISKELFNEGVYSDVFMISGLRGGGVRQLADHI 199 >gi|192291246|ref|YP_001991851.1| GTP-binding proten HflX [Rhodopseudomonas palustris TIE-1] gi|192284995|gb|ACF01376.1| GTP-binding proten HflX [Rhodopseudomonas palustris TIE-1] Length = 455 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 3/172 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST +TRA + AD F TL P L ++ + + +L+D G I N Sbjct: 225 VALVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRAIQLPHGGKAMLSDTVGFISNL 284 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 Q L+ ++LH+ E+ +A + + L + + + Sbjct: 285 PTQLVAAFRATLEEVLEADLILHVRDISHEDAEAQQHDVDNVLRQLGVDAASGRIVEVWN 344 Query: 280 QIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 +ID + + KN A + P S+++G G+ ++L + ++ + R Sbjct: 345 KIDRFEPEQRDELKNIAARRPEDHPCLLVSAVSGEGVDELLLSIEQRLAATR 396 >gi|56963446|ref|YP_175177.1| Era, Era/TrmE family GTP-binding protein [Bacillus clausii KSM-K16] gi|81822138|sp|Q5WHD9|ERA_BACSK RecName: Full=GTPase Era gi|56909689|dbj|BAD64216.1| Era/TrmE family GTP-binding protein Era [Bacillus clausii KSM-K16] Length = 303 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 15/167 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST L V K I +D P TT G++ + + D PGI K Sbjct: 13 VSIIGRPNVGKSTLLNRVIGQKIAIMSDKPQTTRNKVQGVLTRDDAQLVFMDTPGIHKPK 72 Query: 221 HQGAGIGDRFLKHTER-THVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H+ + K+T R ++L++V A + Q I++ L + + + ++ Sbjct: 73 HRLGDFMMKVAKNTLREVDLILYVVEA-DAKFGPGEQYIIERLQETKTPV-----FLLIN 126 Query: 280 QIDTVDSDTLARKKNELATQCGQVPF----EFSSITGHGIPQILECL 322 +ID V + L + + + PF S++ G+ +P ++E + Sbjct: 127 KIDKVSPEELLKV---IDLYKDRYPFAEIIPISALEGNNVPTLVEQI 170 >gi|330939868|gb|EGH43098.1| GTP-binding protein HflX [Pseudomonas syringae pv. pisi str. 1704B] Length = 433 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST SVT + AD F TL P L ++ + +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNSVTDSDVFAADQLFATLDPTLRRLQLDDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ + + +LLH++ + E + + + ++ L +E Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDSHEPDRMSQIEQVMAVLGEIGAE 309 >gi|316934207|ref|YP_004109189.1| GTP-binding proten HflX [Rhodopseudomonas palustris DX-1] gi|315601921|gb|ADU44456.1| GTP-binding proten HflX [Rhodopseudomonas palustris DX-1] Length = 456 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 3/172 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST +TRA + AD F TL P L ++ + + +L+D G I N Sbjct: 226 VALVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRAIQLPHGGKAMLSDTVGFISNL 285 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 Q L+ ++LH+ E+ +A + + L + + + Sbjct: 286 PTQLVAAFRATLEEVLEADLILHVRDISHEDAEAQQSDVDNVLRQLGVDAASGRILEVWN 345 Query: 280 QIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 +ID + + KN A + P S+++G G+ ++L + ++ + R Sbjct: 346 KIDRFEPEQRDELKNIAARRPEDHPCLLVSAVSGEGVDELLLAIEQRLAATR 397 >gi|251825692|gb|ACT20914.1| GTP-binding protein [Pseudomonas fluorescens] Length = 433 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 2/94 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +VT++ AD F TL P L + + +LAD G I Sbjct: 198 IPTVSLVGYTNAGKSTLFNNVTQSDVYAADQLFATLDPTLRRLDLDDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 ++ H+ L+ + + +LLH++ A E + Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDAAEPD 291 >gi|283796120|ref|ZP_06345273.1| GTP-binding protein HflX [Clostridium sp. M62/1] gi|291076336|gb|EFE13700.1| GTP-binding protein HflX [Clostridium sp. M62/1] Length = 417 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 67/163 (41%), Gaps = 12/163 (7%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKN- 219 I+G NAGKST L +T A D F TL P ++ G K +L D G I+ Sbjct: 205 AIVGYTNAGKSTLLNYLTDAGILAQDMLFATLDPTTRTLELPSGQK-ILLTDTVGFIRKL 263 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H L+ + ++LH+V ++ + + L E+ K I + Sbjct: 264 PHHLIEAFKSTLEEARYSDIILHVVDVSNPQMETQIHIVYETLRQL--EITDKTVITVFN 321 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 ++D + D + R + S+ TG GIP +LE L Sbjct: 322 KMDRLTGDVILRDFR------SDFQVKISAKTGEGIPALLETL 358 >gi|218506896|ref|ZP_03504774.1| translation-associated GTPase [Rhizobium etli Brasil 5] Length = 161 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 18/96 (18%) Query: 173 STFLASVTR-AKPKIADYPFTTLYPNLGIVK------------EGYKEFI-----LADIP 214 ST ++T+ A + A+YPF T+ PN G V KE I DI Sbjct: 1 STLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDPRMRKLADIAKSKELIPTRISFVDIA 60 Query: 215 GIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 G+++ A +G G+G++FL + ++H++ E++ Sbjct: 61 GLVRGASKGEGLGNQFLANIREVDAIVHVLRCFEDS 96 >gi|149184562|ref|ZP_01862880.1| GTPase [Erythrobacter sp. SD-21] gi|148831882|gb|EDL50315.1| GTPase [Erythrobacter sp. SD-21] Length = 407 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 46/194 (23%), Positives = 79/194 (40%), Gaps = 35/194 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + ++G NAGKST +T A+ D F TL P + I G ++ IL+D G I + Sbjct: 178 VALVGYTNAGKSTLFNRLTGAEVMAEDLLFATLDPTMRAISLPGVEKAILSDTVGFISDL 237 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 T ++ + LEE A C + ++S ++E +K + L Sbjct: 238 P---------------TQLVAAFRATLEEVTAADVICHVRDISNSSAEAQKTQVLRVLKG 282 Query: 281 IDTVDSDTLARK-------------KNELATQCGQVP------FEFSSITGHGIPQILEC 321 +D +D D +E A + GQ+ S++TG G+ ++L Sbjct: 283 LDVIDGDDGTSSIPILEVWNKWDLLDDEKADELGQLADNSDDIIRISAVTGEGVQELLVQ 342 Query: 322 LHDKIFSIRGENEF 335 L + + + EF Sbjct: 343 LGEMLTAKASVREF 356 >gi|66043840|ref|YP_233681.1| GTP-binding protein, HSR1-related [Pseudomonas syringae pv. syringae B728a] gi|71737921|ref|YP_272868.1| GTP-binding protein HflX [Pseudomonas syringae pv. phaseolicola 1448A] gi|289623757|ref|ZP_06456711.1| GTP-binding protein HflX [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289672585|ref|ZP_06493475.1| GTP-binding protein HflX [Pseudomonas syringae pv. syringae FF5] gi|298484914|ref|ZP_07003013.1| GTP-binding protein HflX [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|302189788|ref|ZP_07266461.1| GTP-binding protein HflX [Pseudomonas syringae pv. syringae 642] gi|63254547|gb|AAY35643.1| GTP-binding protein, HSR1-related [Pseudomonas syringae pv. syringae B728a] gi|71558474|gb|AAZ37685.1| GTP-binding protein HflX [Pseudomonas syringae pv. phaseolicola 1448A] gi|298160601|gb|EFI01623.1| GTP-binding protein HflX [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330865895|gb|EGH00604.1| GTP-binding protein HflX [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330899894|gb|EGH31313.1| GTP-binding protein HflX [Pseudomonas syringae pv. japonica str. M301072PT] gi|330951475|gb|EGH51735.1| GTP-binding protein HflX [Pseudomonas syringae Cit 7] gi|330984559|gb|EGH82662.1| GTP-binding protein HflX [Pseudomonas syringae pv. lachrymans str. M301315] Length = 433 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST SVT + AD F TL P L ++ + +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNSVTDSDVFAADQLFATLDPTLRRLQLDDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ + + +LLH++ + E + + + ++ L +E Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDSHEPDRMSQIEQVMAVLGEIGAE 309 >gi|330886601|gb|EGH20262.1| GTP-binding protein HflX [Pseudomonas syringae pv. mori str. 301020] Length = 433 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST SVT + AD F TL P L ++ + +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNSVTDSDVFAADQLFATLDPTLRRLQLDDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ + + +LLH++ + E + + + ++ L +E Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDSHEPDRMSQIEQVMAVLGEIGAE 309 >gi|330501624|ref|YP_004378493.1| HSR1-like GTP-binding protein [Pseudomonas mendocina NK-01] gi|328915911|gb|AEB56742.1| GTP-binding protein, HSR1-related protein [Pseudomonas mendocina NK-01] Length = 433 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 5/113 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T ++ AD F TL P L ++ + +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNALTTSEVYAADQLFATLDPTLRRLELDDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYN 266 ++ H+ L+ + + +LLH++ A E A Q +L E+ A + Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDAHEPERMAQIEQVQEVLKEIGASD 310 >gi|289648626|ref|ZP_06479969.1| GTP-binding protein HflX [Pseudomonas syringae pv. aesculi str. 2250] Length = 433 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST SVT + AD F TL P L ++ + +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNSVTDSDVFAADQLFATLDPTLRRLQLDDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ + + +LLH++ + E + + + ++ L +E Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDSHEPDRMSQIEQVMAVLGEIGAE 309 >gi|225852611|ref|YP_002732844.1| GTP-binding proten HflX [Brucella melitensis ATCC 23457] gi|256113667|ref|ZP_05454478.1| GTP-binding proten HflX [Brucella melitensis bv. 3 str. Ether] gi|256263896|ref|ZP_05466428.1| GTP-binding protein [Brucella melitensis bv. 2 str. 63/9] gi|265995027|ref|ZP_06107584.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|225640976|gb|ACO00890.1| GTP-binding proten HflX [Brucella melitensis ATCC 23457] gi|262766140|gb|EEZ11929.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|263094028|gb|EEZ17962.1| GTP-binding protein [Brucella melitensis bv. 2 str. 63/9] gi|326409130|gb|ADZ66195.1| GTP-binding proten HflX [Brucella melitensis M28] gi|326538838|gb|ADZ87053.1| GTP-binding proten HflX [Brucella melitensis M5-90] Length = 472 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 235 VALVGYTNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNL 294 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ ++LH+ + + A + + + L+ E + +V + Sbjct: 295 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 354 Query: 279 SQIDTVDSDTLARKKNELA--TQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A ++ G+ P S+ITG G+ ++L + +I Sbjct: 355 NKIDNLDESAREAALRLAAAGSEEGR-PIPVSAITGEGVDRLLSLIETRI 403 >gi|315122354|ref|YP_004062843.1| GTP-binding protein Era [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495756|gb|ADR52355.1| GTP-binding protein Era [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 310 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 11/169 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G NAGKST + AK I + TT GIV E + + D PGI K Sbjct: 23 VALVGATNAGKSTLVNKFVGAKVSIVTHKVQTTRSIVRGIVSEKDVQVVFLDTPGIFKAK 82 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 + R T + ++ +V +Q IL E+ + L ++ L++ Sbjct: 83 DSYHKMMIRLSWSTVKHADIVFLVIDSNRGLQPDVHDILKEIGKRSGRL-----VLILNK 137 Query: 281 IDTVDSDTLARKK---NELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ID V + L + N+L C + F S++ GHG +L L+ + Sbjct: 138 IDCVKPERLLEQAEIINKLV--CVEKTFMVSALKGHGCQDVLNYLYSTL 184 >gi|294852449|ref|ZP_06793122.1| GTP-binding protein HflX [Brucella sp. NVSL 07-0026] gi|294821038|gb|EFG38037.1| GTP-binding protein HflX [Brucella sp. NVSL 07-0026] Length = 496 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 235 VALVGYTNAGKSTLFNRMTGAQVLAEDMLFATLDPTLHRIRLPHGETVILSDTVGFISNL 294 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ ++LH+ + + A + + + L+ E + +V + Sbjct: 295 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 354 Query: 279 SQIDTVDSDTLARKKNELA--TQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A ++ G+ P S+ITG G+ ++L + +I Sbjct: 355 NKIDNLDESAREAALRLAAAGSEEGR-PIPVSAITGEGVDRLLSLIETRI 403 >gi|145341990|ref|XP_001416081.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144576305|gb|ABO94373.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 664 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 12/86 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ VTRA ++ Y FTT +G Y + + D PGI+ Sbjct: 170 ILVCGYPNVGKSSFMNKVTRADVEVQPYAFTTKSIYVGHTDYKYLRWQVLDTPGIL---- 225 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSAL 247 DR L ER + + ++AL Sbjct: 226 ------DRPL--DERNTIEMQSITAL 243 >gi|302841942|ref|XP_002952515.1| Era-like protein [Volvox carteri f. nagariensis] gi|300262154|gb|EFJ46362.1| Era-like protein [Volvox carteri f. nagariensis] Length = 453 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 + +IG PNAGKST + ++ K I Y P TT + +GI + + + IL D PG+I+ Sbjct: 160 VAVIGKPNAGKSTLINALVGQKLSIVTYKPQTTRHRIMGIASDKHYQMILFDTPGVIER 218 >gi|113461247|ref|YP_719316.1| GTP-binding protein HflX [Haemophilus somnus 129PT] gi|112823290|gb|ABI25379.1| GTP-binding protein HflX [Haemophilus somnus 129PT] Length = 458 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 2/88 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T+A +AD F TL P L + + +LAD G I Sbjct: 222 IPTISLVGYTNAGKSTLFNVLTQANVYVADQLFATLDPTLKRLPIQDVGNCVLADTVGFI 281 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIV 244 + H L+ T +LLH++ Sbjct: 282 RELPHDLVSAFKSTLQETTEASLLLHVI 309 >gi|158313083|ref|YP_001505591.1| small GTP-binding protein [Frankia sp. EAN1pec] gi|158108488|gb|ABW10685.1| small GTP-binding protein [Frankia sp. EAN1pec] Length = 503 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 17/171 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGIIKN 219 + I G NAGKS+ L +T A + D F TL P + + +G + F LAD G +++ Sbjct: 287 VAIAGYTNAGKSSLLNRLTGAGVLVEDALFATLDPTVRRATLPDG-RIFTLADTVGFVRH 345 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQ-AAYQCILDELSAYNSELRKKIEI 275 HQ L+ ++LH+V SA + Q +A + +L E+ A E+ Sbjct: 346 LPHQIVEAFRSTLEEVVDADLVLHVVDGSAPDPMGQISAVREVLAEIDAAGVP-----EL 400 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + ++++D VD TLA + Q S+ +G G+ +++E L +I Sbjct: 401 IVVNKVDAVDPTTLA-----VLRQAVPDAIFVSARSGAGLQELVEALSARI 446 >gi|298530649|ref|ZP_07018051.1| GTP-binding proten HflX [Desulfonatronospira thiodismutans ASO3-1] gi|298510023|gb|EFI33927.1| GTP-binding proten HflX [Desulfonatronospira thiodismutans ASO3-1] Length = 552 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 16/134 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 I ++G NAGKST L ++TR++ D F TL P ++ +E +L D G IK+ Sbjct: 393 ISLVGYTNAGKSTLLNTLTRSRILAEDKLFATLDPTSRRLRFPDEREVVLTDTVGFIKDL 452 Query: 221 HQGAGIGDRFLKHTER---THVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKI 273 + + + F+ E VL+H+ A +EE V+A Q +L L EL K Sbjct: 453 PE--DLREAFMATLEELSLARVLVHVADASHPEVEEQVEAV-QGLLRLL-----ELEDKP 504 Query: 274 EIVGLSQIDTVDSD 287 ++ L++ D V D Sbjct: 505 LVMVLNKWDLVTQD 518 >gi|332522204|ref|ZP_08398456.1| ribosome biogenesis GTPase Era [Streptococcus porcinus str. Jelinkova 176] gi|332313468|gb|EGJ26453.1| ribosome biogenesis GTPase Era [Streptococcus porcinus str. Jelinkova 176] Length = 299 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTEQEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E + I++ L + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEKRGKGDEMIMERLKNAKIPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ IP ++ L D + Sbjct: 119 VINKIDKVHPDQLLEQIDDFRSQMDFKEIVP--ISALEGNNIPTLMSLLTDNL 169 >gi|330978949|gb|EGH78008.1| GTP-binding protein HflX [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 433 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST SVT + AD F TL P L ++ + +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNSVTDSDVFAADQLFATLDPTLRRLQLDDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ + + +LLH++ + E + + + ++ L +E Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDSHEPDRMSQIEQVMAVLGEIGAE 309 >gi|259416757|ref|ZP_05740677.1| GTP-binding protein HflX [Silicibacter sp. TrichCH4B] gi|259348196|gb|EEW59973.1| GTP-binding protein HflX [Silicibacter sp. TrichCH4B] Length = 423 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 15/176 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKN 219 + ++G NAGKST +T A D F TL P + V+ +G E IL+D G I + Sbjct: 205 VALVGYTNAGKSTLFNRLTGADVMAKDMLFATLDPTMRRVELPDG-PEVILSDTVGFISD 263 Query: 220 AHQGAGIGDR-FLKHTERTHVLLH---IVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 R L+ V+LH I + EN + IL+ L E R IE+ Sbjct: 264 LPTELVASFRATLEEVLAADVILHVRDISHSDTENQAEDVEQILNSLGV--DEDRALIEV 321 Query: 276 VG-LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 + Q+ D+D R++ E + + + S+ITG G+P++L + K+ +R Sbjct: 322 WNKIDQLSEEDADA-CRQRAERSEEL----YAISAITGEGLPELLNDIALKLQGVR 372 >gi|158423629|ref|YP_001524921.1| transcriptional regulator [Azorhizobium caulinodans ORS 571] gi|158330518|dbj|BAF88003.1| transcriptional regulator [Azorhizobium caulinodans ORS 571] Length = 311 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 15/171 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGII--K 218 + ++G PNAGKST + K I + TT GI EG + IL D PGI K Sbjct: 20 VALLGAPNAGKSTLTNQLVGTKVSIVSHKVQTTRAIVRGIALEGPSQVILVDTPGIFSPK 79 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVS--ALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + A + + ++ V L + + ++ENV++ IL L+ K+ + Sbjct: 80 RRLERAMVNTAWTSASDADVVALLVDANRGIDENVES----ILKPLAEV-----KRPRAL 130 Query: 277 GLSQIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECLHDKI 326 L++ID + DTL +L + + F S++ G G+ + +K+ Sbjct: 131 ILNKIDMIRRDTLLELAQKLTERLSFERVFMVSALKGDGVDDVRTWFAEKV 181 >gi|332024846|gb|EGI65034.1| Putative nucleolar GTP-binding protein 1 [Acromyrmex echinatior] Length = 640 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 31/175 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ + Sbjct: 171 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLFVGHTDYKYLRWQVIDTPGILDHPL 230 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAA--YQCILDELSAYNSELRKKI------ 273 + ER + + V+AL +++AA Y C L E + E + K+ Sbjct: 231 E------------ERNVIEMQAVTAL-AHLRAAVLYFCDLSEQCGHTLEEQVKLFESIKP 277 Query: 274 ------EIVGLSQIDTVDSDTLARKKNELAT---QCGQVP-FEFSSITGHGIPQI 318 I+ +++ D + + L+ +K + +P E S+IT G+ ++ Sbjct: 278 LFMNKPLIIVMNKTDIIRLEELSPEKRAVLKPFENDTNIPVLEMSTITDFGVMEV 332 >gi|254714186|ref|ZP_05175997.1| GTP1/OBG [Brucella ceti M644/93/1] gi|254717621|ref|ZP_05179432.1| GTP1/OBG [Brucella ceti M13/05/1] gi|261219457|ref|ZP_05933738.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261321953|ref|ZP_05961150.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|260924546|gb|EEX91114.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261294643|gb|EEX98139.1| conserved hypothetical protein [Brucella ceti M644/93/1] Length = 472 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 235 VALVGYTNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNL 294 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ ++LH+ + + A + + + L+ E + +V + Sbjct: 295 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 354 Query: 279 SQIDTVDSDTLARKKNELA--TQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A ++ G+ P S+ITG G+ ++L + +I Sbjct: 355 NKIDNLDESAREAALRLAAAGSEEGR-PIPVSAITGEGVDRLLSLIETRI 403 >gi|258511948|ref|YP_003185382.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478674|gb|ACV58993.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 298 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 14/171 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PN GKST L ++ K I ++ P TT G+ + I D PGI K Sbjct: 8 VALIGRPNVGKSTLLNALVGQKVAIMSNRPQTTRNRIRGVRTTETSQMIFIDTPGIHKPK 67 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H+ G + D LK V++ +V A V Q I +L + + I+ L+ Sbjct: 68 HRLGEYMVDAALKTLNEVDVIVLVVDA-SSPVHPTEQEIAKQLERVRTPV-----ILALN 121 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHDKI 326 ++D ++ L K+ E PFE S++ G + + E + ++ Sbjct: 122 KVDALEDRALVLKRIEEYQALR--PFEEYVPISALRGEQVDLLAEIIEKRL 170 >gi|169607705|ref|XP_001797272.1| hypothetical protein SNOG_06911 [Phaeosphaeria nodorum SN15] gi|160701474|gb|EAT85562.2| hypothetical protein SNOG_06911 [Phaeosphaeria nodorum SN15] Length = 538 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 18/114 (15%) Query: 154 LKLKLIADIGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------K 202 LK ++++ +GL N GKST ++T+ A++P+ T+ P V Sbjct: 160 LKSGIVSERPAVGLANVGKSTLFQAITKCSLGNPANFPYATIDPEEARVIVPDERFDWLV 219 Query: 203 EGYK-------EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 E YK + DI G+ + A GAG+G+ FL H + +V ++ Sbjct: 220 EHYKPKSQVPANLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDD 273 >gi|330807232|ref|YP_004351694.1| GTP-binding protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375340|gb|AEA66690.1| GTP-binding protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 433 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 2/94 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +VT++ AD F TL P L + + +LAD G I Sbjct: 198 IPTVSLVGYTNAGKSTLFNNVTQSDVYAADQLFATLDPTLRRLDLDDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 ++ H+ L+ + + +LLH++ A E + Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDAAEPD 291 >gi|319786414|ref|YP_004145889.1| GTP-binding proten HflX [Pseudoxanthomonas suwonensis 11-1] gi|317464926|gb|ADV26658.1| GTP-binding proten HflX [Pseudoxanthomonas suwonensis 11-1] Length = 444 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 4/107 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + ++G NAGKST ++T A AD F TL P + + +LAD G +++ Sbjct: 200 VALVGYTNAGKSTLFNALTGADAYAADQLFATLDPTVRRISLPGGSVVLADTVGFVRDLP 259 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA---LEENVQAAYQCILDELSA 264 H+ L +LLH+V A L E A +L E+ A Sbjct: 260 HELVAAFRSTLSEAREADLLLHVVDAADPLREERIAQVDSVLSEVGA 306 >gi|237798279|ref|ZP_04586740.1| GTP-binding protein HflX [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021131|gb|EGI01188.1| GTP-binding protein HflX [Pseudomonas syringae pv. oryzae str. 1_6] Length = 433 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST SVT + AD F TL P L ++ + +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNSVTDSDVFAADQLFATLDPTLRRLQLDDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ + + +LLH++ + E + + + ++ L +E Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDSHEPDRMSQIEQVMAVLGEIGAE 309 >gi|149634777|ref|XP_001511576.1| PREDICTED: similar to GTP-binding protein NGB [Ornithorhynchus anatinus] Length = 670 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 212 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 268 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 269 --LEDRNTIEMQAITALAHLRAAVLFVMDVSEQC 300 >gi|157961137|ref|YP_001501171.1| GTP-binding protein EngA [Shewanella pealeana ATCC 700345] gi|189037162|sp|A8H249|DER_SHEPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|157846137|gb|ABV86636.1| small GTP-binding protein [Shewanella pealeana ATCC 700345] Length = 490 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAHLAGYEFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L + A + AA I L + R+K Sbjct: 60 IDGTEEGIETRMAEQSLAAIEEADVVLFLTDA-RAGLTAADLAIAQHLRS-----REKTT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V +++D +D+D+ + L G+V ++ ++ G G+ ++E Sbjct: 114 FVVANKVDGIDADSACAEFWSLG--LGEV-YQMAAAQGRGVTNMIE 156 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 19/186 (10%) Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYK 206 Q+++ L +KL IIG PN GKST + + + D P TT ++ + Sbjct: 192 QKRLQDLPIKL----AIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYIPMERQGR 247 Query: 207 EFILADIPGIIKNAHQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 E++L D G+ + + + + LK E ++V+L ++ A E + + L Sbjct: 248 EYVLIDTAGVRRRSKVHETVEKFSVIKTLKAVEDSNVVLLVIDAREGIAEQDLGLLGFVL 307 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQI 318 +A + ++ +++ D +D + R K EL + G + F S++ G G+ + Sbjct: 308 NA------GRALVIAINKWDGIDQNIKDRVKTELDRRLGFIDFARIHFISALHGTGVGHL 361 Query: 319 LECLHD 324 E + + Sbjct: 362 FESIEE 367 >gi|284052882|ref|ZP_06383092.1| GTP-binding protein, HSR1-related [Arthrospira platensis str. Paraca] Length = 511 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 13/146 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGI---VKEGYKEFILAD 212 + + I+G NAGKST L +T ++ AD F TL P L I V E + ++ D Sbjct: 337 VPTLAIVGYTNAGKSTLLNVLTASEIYAADQLFATLDPTSRRLTIPDAVTEEPQNIVITD 396 Query: 213 IPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 G I + D F L+ VLLH+V QA Q +++ L+ + Sbjct: 397 TVGFIHELP--PALIDAFRATLEEVTDADVLLHLVDLSHPAWQAQIQSVMEILT--QMPI 452 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNE 295 ++ ++ID+VD +TL + E Sbjct: 453 TPGPALLAFNKIDSVDGETLRFAQEE 478 >gi|212634303|ref|YP_002310828.1| GTP-binding protein EngA [Shewanella piezotolerans WP3] gi|226741196|sp|B8CKR5|DER_SHEPW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|212555787|gb|ACJ28241.1| GTP-binding protein EngA [Shewanella piezotolerans WP3] Length = 490 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAHLAGYEFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L + A + AA I L + R+K Sbjct: 60 IDGTEEGIETRMAEQSLAAIEEADVVLFMTDA-RAGLTAADLAIAQHLRS-----REKTT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V +++D +D+D+ + L G+V ++ ++ G G+ ++E Sbjct: 114 FVVANKVDGIDADSACAEFWSLG--LGEV-YQMAAAQGRGVTNMIE 156 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 25/189 (13%) Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTT---LYPNLGIVKE 203 Q+++ L +KL IIG PN GKST + + + D P TT +Y + + +E Sbjct: 192 QKRLQDLPIKL----AIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIY--IPMERE 245 Query: 204 GYKEFILADIPGIIKNAHQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCIL 259 G +E++L D G+ + + + + LK E +V+L I+ A E + + Sbjct: 246 G-REYVLIDTAGVRRRSKVHETVEKFSVIKTLKAVEDCNVVLLIIDAREGIAEQDLGLLG 304 Query: 260 DELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGI 315 L+A + ++ +++ D +D + R K+EL + G + F S++ G G+ Sbjct: 305 FALNA------GRALVIAVNKWDGIDQEVKDRVKSELDRRLGFIDFARIHFISALHGTGV 358 Query: 316 PQILECLHD 324 + E + + Sbjct: 359 GHLYESIEE 367 >gi|119383172|ref|YP_914228.1| GTP-binding protein Era [Paracoccus denitrificans PD1222] gi|119372939|gb|ABL68532.1| GTP-binding protein Era [Paracoccus denitrificans PD1222] Length = 303 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 7/168 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST L + AK I + T + GI G + + D PGI + Sbjct: 9 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGIAMRGASQIVFVDTPGIFRPR 68 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + + V+L ++ A + Q I+D L + ++ ++ Sbjct: 69 RRLDRSMVKAAWGGAADADVILLLIEA-HRGLTDGTQAIIDNLRDHAG---TTPVVLVIN 124 Query: 280 QIDTVDSDTLARKKNEL-ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +ID V S+TL ++ A F S+ GHG +LE L ++ Sbjct: 125 KIDRVKSETLLALSQQVNAAFDFTRTFMISAEKGHGCDDLLEWLAGQV 172 >gi|170717290|ref|YP_001784405.1| GTP-binding protein HSR1-related [Haemophilus somnus 2336] gi|168825419|gb|ACA30790.1| GTP-binding protein HSR1-related [Haemophilus somnus 2336] Length = 458 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 2/88 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T+A +AD F TL P L + + +LAD G I Sbjct: 222 IPTISLVGYTNAGKSTLFNVLTQANVYVADQLFATLDPTLKRLPIQDVGNCVLADTVGFI 281 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIV 244 + H L+ T +LLH++ Sbjct: 282 RELPHDLVSAFKSTLQETTEASLLLHVI 309 >gi|323698207|ref|ZP_08110119.1| ferrous iron transport protein B [Desulfovibrio sp. ND132] gi|323458139|gb|EGB14004.1| ferrous iron transport protein B [Desulfovibrio desulfuricans ND132] Length = 711 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 3/100 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 IGI G PN GK+T ++T A+ +A++P T+ +G + G + L D+PG A Sbjct: 6 IGIAGNPNCGKTTMFNALTGARQHVANWPGVTVEKKIGHIHTGADDVELVDLPGTYSLTA 65 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVS--ALEENVQAAYQCI 258 + + R +R ++ I++ ALE N+ A Q + Sbjct: 66 YTQEELVARNFLVEDRPQAVIDIMNADALERNLYLAVQIL 105 >gi|281411746|ref|YP_003345825.1| GTP-binding proten HflX [Thermotoga naphthophila RKU-10] gi|281372849|gb|ADA66411.1| GTP-binding proten HflX [Thermotoga naphthophila RKU-10] Length = 406 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 7/114 (6%) Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPG 215 K I + I+G NAGKST L +T + +AD F TL P +K + + +++D G Sbjct: 184 KKIPHVSIVGYTNAGKSTLLKVLTDSDVYVADKLFATLEPVTRRLKLKSGRVVLVSDTVG 243 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSA 264 I+ H L+ + + VL+H+V A LEE ++A+ + +L+E+ A Sbjct: 244 FIRKLPHTIVSAFKATLEEIKYSDVLIHLVDASDPYLEEKMKAS-EKVLEEIGA 296 >gi|261752416|ref|ZP_05996125.1| GTP binding protein HflX [Brucella suis bv. 5 str. 513] gi|261742169|gb|EEY30095.1| GTP binding protein HflX [Brucella suis bv. 5 str. 513] Length = 346 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 109 VALVGYTNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNL 168 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ ++LH+ + + A + + + L+ E + +V + Sbjct: 169 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 228 Query: 279 SQIDTVDSDTLARKKNELA--TQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A ++ G+ P S+ITG G+ ++L + +I Sbjct: 229 NKIDNLDESAREAALRLAAAGSEEGR-PIPVSAITGEGVDRLLSLIETRI 277 >gi|254706704|ref|ZP_05168532.1| GTP1/OBG [Brucella pinnipedialis M163/99/10] gi|254710188|ref|ZP_05171999.1| GTP1/OBG [Brucella pinnipedialis B2/94] gi|256031682|ref|ZP_05445296.1| GTP1/OBG [Brucella pinnipedialis M292/94/1] gi|256159838|ref|ZP_05457571.1| GTP1/OBG [Brucella ceti M490/95/1] gi|256255084|ref|ZP_05460620.1| GTP1/OBG [Brucella ceti B1/94] gi|260168816|ref|ZP_05755627.1| GTP1/OBG [Brucella sp. F5/99] gi|261222277|ref|ZP_05936558.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261314166|ref|ZP_05953363.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261317745|ref|ZP_05956942.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261758301|ref|ZP_06002010.1| GTP1/OBG [Brucella sp. F5/99] gi|265988776|ref|ZP_06101333.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|265998241|ref|ZP_06110798.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|260920861|gb|EEX87514.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261296968|gb|EEY00465.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261303192|gb|EEY06689.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261738285|gb|EEY26281.1| GTP1/OBG [Brucella sp. F5/99] gi|262552709|gb|EEZ08699.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|264660973|gb|EEZ31234.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] Length = 472 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 235 VALVGYTNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNL 294 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ ++LH+ + + A + + + L+ E + +V + Sbjct: 295 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 354 Query: 279 SQIDTVDSDTLARKKNELA--TQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A ++ G+ P S+ITG G+ ++L + +I Sbjct: 355 NKIDNLDESAREAALRLAAAGSEEGR-PIPVSAITGEGVDRLLSLIETRI 403 >gi|240850696|ref|YP_002972096.1| GTP-binding protein HflX [Bartonella grahamii as4aup] gi|240267819|gb|ACS51407.1| GTP-binding protein HflX [Bartonella grahamii as4aup] Length = 447 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 4/169 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + ++G N GKST ++ A + F TL P L +V K +L+D G I N Sbjct: 220 VALVGYTNTGKSTLFNRLSGADVLAKNMLFATLDPTLRKVVLPHGKTILLSDTVGFISNL 279 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 R L+ ++LH+ + + +A Q +L+ LS+ + ++ I+ + Sbjct: 280 PTNLIAAFRATLEEVVEADLILHVRDMSDLDHRAHAQDVLEVLSSLDIDIDDMEHIIEVW 339 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 ++ID +D L + T+ S++ G G+ Q+L + +IF Sbjct: 340 NKIDMLDEQALNVLQTSAKTRLNP-ALMVSALKGDGLDQLLRAIEKRIF 387 >gi|70734071|ref|YP_257711.1| GTP-binding protein HflX [Pseudomonas fluorescens Pf-5] gi|68348370|gb|AAY95976.1| GTP-binding protein HflX [Pseudomonas fluorescens Pf-5] Length = 433 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 2/103 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +VT + AD F TL P L ++ + +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNAVTASDVFAADQLFATLDPTLRRLELDDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL 259 ++ H+ L+ + + +LLH++ A E A + ++ Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDAHEPERMAQIEQVM 300 >gi|55980535|ref|YP_143832.1| GTP-binding protein HflX [Thermus thermophilus HB8] gi|55771948|dbj|BAD70389.1| GTP-binding protein HflX [Thermus thermophilus HB8] Length = 503 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 17/173 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK----EFILADIPGII 217 + ++G NAGK+T L ++TRA + D F TL P + + G+ E + D G I Sbjct: 332 VAVVGYTNAGKTTLLRALTRAGEEGEDKLFATLRP---LTRRGFLPGVGEVLFTDTVGFI 388 Query: 218 KNAHQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ + R L+ VL+H++ A EE ++ + D L E ++ Sbjct: 389 RHMPEELLTAFRATLEEVREADVLVHVLDASEEGALERHRVVRDLLLDLGVE---APVVL 445 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 L++ D L L + G VP S++ G G+ ++ E L + + Sbjct: 446 ALNKADRAAPYDL----YFLGERLGGVP--VSALKGTGLKELKEALARALLDL 492 >gi|254719175|ref|ZP_05180986.1| GTP1/OBG [Brucella sp. 83/13] gi|265984171|ref|ZP_06096906.1| GTP-binding protein [Brucella sp. 83/13] gi|306838167|ref|ZP_07471023.1| GTP-binding proten HflX [Brucella sp. NF 2653] gi|264662763|gb|EEZ33024.1| GTP-binding protein [Brucella sp. 83/13] gi|306406757|gb|EFM62980.1| GTP-binding proten HflX [Brucella sp. NF 2653] Length = 472 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 235 VALVGYTNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNL 294 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ ++LH+ + + A + + + L+ E + +V + Sbjct: 295 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 354 Query: 279 SQIDTVDSDTLARKKNELA--TQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A ++ G+ P S+ITG G+ ++L + +I Sbjct: 355 NKIDNLDESAREAALRLAAAGSEEGR-PIPVSAITGEGVDRLLSLIETRI 403 >gi|194379744|dbj|BAG58224.1| unnamed protein product [Homo sapiens] Length = 518 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 57 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 113 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 114 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 145 >gi|126179866|ref|YP_001047831.1| small GTP-binding protein [Methanoculleus marisnigri JR1] gi|125862660|gb|ABN57849.1| small GTP-binding protein [Methanoculleus marisnigri JR1] Length = 326 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 5/78 (6%) Query: 146 LGQEKIIWLKLKLIAD----IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV 201 L + + I KL + D + + G PN GKS+F+ V+ A+P+IA YPFTT +G Sbjct: 138 LNEARNILRKLPHVNDDDFTVVVAGFPNVGKSSFIRLVSTAEPEIAAYPFTTKGIVVGHR 197 Query: 202 KEGYKEFI-LADIPGIIK 218 + G ++ I D PG+++ Sbjct: 198 EIGKRDRIQFIDTPGVLE 215 >gi|49619015|gb|AAT68092.1| GTP binding protein NGB [Danio rerio] Length = 631 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 16/182 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA ++ Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVEVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNSELR----KKIEIV 276 + +R + L H+ +A+ + + QC + +L +N+ +R K IV Sbjct: 230 --LEERNTIEMQAITALAHLRAAVLYVMDVSEQCGHTLSQQLELFNN-IRPLFANKPLIV 286 Query: 277 GLSQIDTVDSDTLARKKNEL---ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 ++ D L+ + ++ T G E SS+T G+ Q+ D++ + R + Sbjct: 287 MANKCDVRKISELSEENQKIFADLTAEGVDVIETSSLTEEGVMQVKTEACDRLLTHRVDT 346 Query: 334 EF 335 + Sbjct: 347 KM 348 >gi|332833495|ref|XP_003312478.1| PREDICTED: nucleolar GTP-binding protein 1 [Pan troglodytes] Length = 622 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 161 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 217 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 218 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 249 >gi|294496533|ref|YP_003543026.1| ferrous iron transporter B [Methanohalophilus mahii DSM 5219] gi|292667532|gb|ADE37381.1| ferrous iron transport protein B [Methanohalophilus mahii DSM 5219] Length = 642 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I +G P+ GKS F + VT +++YP TT+ G VK G K+ + D+PGI + Sbjct: 10 IAFVGNPSVGKSAFFSRVTGVGVMVSNYPGTTVEMTRGTVKVGQKKIDIVDLPGIYSLGT 69 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCI 258 + + + +L E V++++V A LE N+ Q + Sbjct: 70 STEDERVSKEYLVR-EYPDVIVNVVDATRLERNLYLTLQIL 109 >gi|308800932|ref|XP_003075247.1| NOG1_ARATH Probable nucleolar GTP-binding protein 1 gb|AAG50935.1| GTP-binding protein, p (ISS) [Ostreococcus tauri] gi|116061801|emb|CAL52519.1| NOG1_ARATH Probable nucleolar GTP-binding protein 1 gb|AAG50935.1| GTP-binding protein, p (ISS) [Ostreococcus tauri] Length = 666 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 12/86 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ VTRA ++ Y FTT +G Y + + D PGI+ Sbjct: 171 ILVCGYPNVGKSSFMNKVTRADVEVQPYAFTTKSIYVGHTDYKYLRWQVLDTPGIL---- 226 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSAL 247 DR L ER + + ++AL Sbjct: 227 ------DRPL--DERNTIEMQSITAL 244 >gi|331695958|ref|YP_004332197.1| GTP-binding proten HflX [Pseudonocardia dioxanivorans CB1190] gi|326950647|gb|AEA24344.1| GTP-binding proten HflX [Pseudonocardia dioxanivorans CB1190] Length = 493 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 6/140 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + I+G NAGKS+ L ++T A + D F TL P + +++ L D G +++ Sbjct: 270 VAIVGYTNAGKSSLLNALTDAGVLVEDALFATLDPTTRRAETPDGRDYTLTDTVGFVRHL 329 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKKIEIV 276 HQ L+ T + +L+H+V A L E+ AA + +L E+ + R E++ Sbjct: 330 PHQLVEAFRSTLEETAQADLLVHVVDASDPLPEDQIAAVRKVLVEI-GEEQQGRMPPELL 388 Query: 277 GLSQIDTVDSDTLARKKNEL 296 +++ID LAR ++ L Sbjct: 389 VVNKIDAAGDLQLARLRHLL 408 >gi|254704399|ref|ZP_05166227.1| GTP1/OBG [Brucella suis bv. 3 str. 686] gi|261755076|ref|ZP_05998785.1| GTP-binding protein [Brucella suis bv. 3 str. 686] gi|261744829|gb|EEY32755.1| GTP-binding protein [Brucella suis bv. 3 str. 686] Length = 472 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 235 VALVGYTNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNL 294 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ ++LH+ + + A + + + L+ E + +V + Sbjct: 295 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 354 Query: 279 SQIDTVDSDTLARKKNELA--TQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A ++ G+ P S+ITG G+ ++L + +I Sbjct: 355 NKIDNLDESAREAALRLAAAGSEEGR-PIPVSAITGEGVDRLLSLIETRI 403 >gi|228999599|ref|ZP_04159176.1| Ferrous iron transport protein B [Bacillus mycoides Rock3-17] gi|229007146|ref|ZP_04164770.1| Ferrous iron transport protein B [Bacillus mycoides Rock1-4] gi|228754104|gb|EEM03525.1| Ferrous iron transport protein B [Bacillus mycoides Rock1-4] gi|228760125|gb|EEM09094.1| Ferrous iron transport protein B [Bacillus mycoides Rock3-17] Length = 657 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 17/165 (10%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAH 221 ++G PN GK++ ++T + + ++ T+ +G +K K+ L D+PGI + Sbjct: 1 MLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKG--KQGTLIDLPGIYDLNPVS 58 Query: 222 QGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + G+ +FL TE H +L+IV S E N+ Q + E K + I GL+ Sbjct: 59 RDEGVVTKFL-LTEEFHHMLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-GLN 107 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 ID + N L+ G + +G G ++L LH+ Sbjct: 108 MIDVAKQRGIVINANRLSEILGVTVVPVVARSGKGCEELLATLHE 152 >gi|161619062|ref|YP_001592949.1| GTP-binding protein HSR1-related [Brucella canis ATCC 23365] gi|163843379|ref|YP_001627783.1| GTP-binding protein HSR1-related [Brucella suis ATCC 23445] gi|260566354|ref|ZP_05836824.1| GTP1/OBG protein [Brucella suis bv. 4 str. 40] gi|161335873|gb|ABX62178.1| GTP-binding protein HSR1-related [Brucella canis ATCC 23365] gi|163674102|gb|ABY38213.1| GTP-binding protein HSR1-related [Brucella suis ATCC 23445] gi|260155872|gb|EEW90952.1| GTP1/OBG protein [Brucella suis bv. 4 str. 40] Length = 472 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 235 VALVGYTNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNL 294 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ ++LH+ + + A + + + L+ E + +V + Sbjct: 295 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 354 Query: 279 SQIDTVDSDTLARKKNELA--TQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A ++ G+ P S+ITG G+ ++L + +I Sbjct: 355 NKIDNLDESAREAALRLAAAGSEEGR-PIPVSAITGEGVDRLLSLIETRI 403 >gi|194378820|dbj|BAG63575.1| unnamed protein product [Homo sapiens] Length = 518 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 57 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 113 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 114 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 145 >gi|194017708|ref|ZP_03056318.1| GTP-binding protein Era [Bacillus pumilus ATCC 7061] gi|194010608|gb|EDW20180.1| GTP-binding protein Era [Bacillus pumilus ATCC 7061] Length = 301 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 21/168 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D P TT G++ + I D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTNTSQTIFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K T ++L +++A +E + I++ L ++ + + Sbjct: 71 HK---LGDFMMKVATNTLKEVDLILFMINA-KEGYGKGDEFIIERLKQTSTPV-----FL 121 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILE 320 +++ID + D L +E T+ PF+ S++ G+ I +L+ Sbjct: 122 VVNKIDQIHPDELFLLIDEYRTRY---PFKEIVPISALEGNNIDTLLQ 166 >gi|196013490|ref|XP_002116606.1| hypothetical protein TRIADDRAFT_50895 [Trichoplax adhaerens] gi|190580882|gb|EDV20962.1| hypothetical protein TRIADDRAFT_50895 [Trichoplax adhaerens] Length = 633 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 34/59 (57%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I G PN GKS+F+ +TRA ++ Y FTT +G + Y + + D PGI+ ++ Sbjct: 174 ILICGFPNVGKSSFINKITRADVEVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHS 232 >gi|221043724|dbj|BAH13539.1| unnamed protein product [Homo sapiens] Length = 587 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 126 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 182 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 183 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 214 >gi|148269536|ref|YP_001243996.1| small GTP-binding protein [Thermotoga petrophila RKU-1] gi|147735080|gb|ABQ46420.1| small GTP-binding protein [Thermotoga petrophila RKU-1] Length = 406 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 7/114 (6%) Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPG 215 K I + I+G NAGKST L +T + +AD F TL P +K + + +++D G Sbjct: 184 KKIPHVSIVGYTNAGKSTLLKVLTDSDVYVADKLFATLEPVTRRLKLKSGRVVLVSDTVG 243 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSA 264 I+ H L+ + + VL+H+V A LEE ++A+ + +L+E+ A Sbjct: 244 FIRKLPHTIVSAFKATLEEIKYSDVLIHLVDASDPYLEEKMKAS-ERVLEEIGA 296 >gi|114773228|ref|ZP_01450463.1| GTPase, HflX [alpha proteobacterium HTCC2255] gi|114546347|gb|EAU49256.1| GTPase, HflX [alpha proteobacterium HTCC2255] Length = 431 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 2/88 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T A AD F TL P L ++ ILAD G I Sbjct: 197 IPTLSLVGYTNAGKSTLFNTITDANVYAADQLFATLDPTLRKIELADVGTAILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIV 244 ++ H L+ T+ +LLH+V Sbjct: 257 RHLPHDLVAAFKATLQETQEADLLLHVV 284 >gi|332140453|ref|YP_004426191.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype'] gi|332141960|ref|YP_004427698.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype'] gi|238693251|sp|B4RV85|DER_ALTMD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|327550475|gb|AEA97193.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype'] gi|327551982|gb|AEA98700.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype'] Length = 481 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 11/165 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +T + +ADYP T G K ++FI+ D GI Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTNTRDALVADYPGLTRDRKYGQAKFEKRQFIVVDTGGI 60 Query: 217 IKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + A + + L E V+L +V A + A Q I D L N K+I + Sbjct: 61 TGDEEGIDAEMAQQSLLAIEEADVVLFLVDA-RAGLLPADQGIADHLRRIN----KQIFV 115 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V +++D +D D+ + + L G + + ++ G G+ Q+L+ Sbjct: 116 VA-NKVDGIDGDSESAEFYSLG--LGAIK-QIAAAHGRGVSQLLQ 156 >gi|256061194|ref|ZP_05451346.1| GTP1/OBG [Brucella neotomae 5K33] gi|261325201|ref|ZP_05964398.1| GTP-binding protein [Brucella neotomae 5K33] gi|261301181|gb|EEY04678.1| GTP-binding protein [Brucella neotomae 5K33] Length = 472 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 235 VALVGYTNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNL 294 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ ++LH+ + + A + + + L+ E + +V + Sbjct: 295 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 354 Query: 279 SQIDTVDSDTLARKKNELA--TQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A ++ G+ P S+ITG G+ ++L + +I Sbjct: 355 NKIDNLDESAREAALRLAAAGSEEGR-PIPVSAITGEGVDRLLSLIETRI 403 >gi|237837775|ref|XP_002368185.1| GTP-binding protein, putative [Toxoplasma gondii ME49] gi|211965849|gb|EEB01045.1| GTP-binding protein, putative [Toxoplasma gondii ME49] gi|221488547|gb|EEE26761.1| GTP-binding protein, putative [Toxoplasma gondii GT1] gi|221509050|gb|EEE34619.1| GTP-binding protein, putative [Toxoplasma gondii VEG] Length = 392 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 25/136 (18%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPK-----------------------IADYPFTTLYP 196 A + +IG P+ GKST L S+T + + Y FTTL Sbjct: 64 ARVCMIGFPSVGKSTLLNSLTATSSQPSAMTVGASGTSAGTDSVKQLSAVGAYEFTTLCC 123 Query: 197 NLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQ 256 + + L D+PGII+ A +G G G + + ++L ++ A +++ Q Q Sbjct: 124 QPSVFYVNNAKIQLLDLPGIIEGAAEGRGRGRQVIAVAHSCDLILVVLDATKDDRQQ--Q 181 Query: 257 CILDELSAYNSELRKK 272 ++ EL A L K+ Sbjct: 182 LLVRELEAVGIRLNKR 197 >gi|195148958|ref|XP_002015429.1| GL11028 [Drosophila persimilis] gi|194109276|gb|EDW31319.1| GL11028 [Drosophila persimilis] Length = 381 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 20/151 (13%) Query: 162 IGIIGLPNAGKSTFLASVT--RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 I +IG+PN GKSTF+ ++ R P A TT N I G + + D PG++ Sbjct: 66 IAVIGVPNVGKSTFINNIINHRVCPTSAKV-HTTRKSNTAICTTGQTQLVFYDTPGLVTQ 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI-VSALEENVQAAYQ------CILDELSAYNS----- 267 ++ K + R H + H V A+ ++V ++ +LD L AY + Sbjct: 125 REIRKHHLEQSFKSSYR-HAIQHADVIAVMQDVSNSWTRKELHPTVLDTLKAYANLPSFL 183 Query: 268 ELRK----KIEIVGLSQIDTVDSDTLARKKN 294 L K K + V L I T+ +DTL+ ++N Sbjct: 184 VLNKIDALKSKRVLLDLIKTLTNDTLSGQRN 214 >gi|198455742|ref|XP_002138128.1| GA24581 [Drosophila pseudoobscura pseudoobscura] gi|198135377|gb|EDY68686.1| GA24581 [Drosophila pseudoobscura pseudoobscura] Length = 381 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 20/151 (13%) Query: 162 IGIIGLPNAGKSTFLASVT--RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 I +IG+PN GKSTF+ ++ R P A TT N I G + + D PG++ Sbjct: 66 IAVIGVPNVGKSTFINNIINHRVCPTSAKV-HTTRKSNTAICTTGQTQLVFYDTPGLVTQ 124 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI-VSALEENVQAAYQ------CILDELSAYNS----- 267 ++ K + R H + H V A+ ++V ++ +LD L AY + Sbjct: 125 REIRKHHLEQSFKSSYR-HAIQHADVIAVMQDVSNSWTRKELHPTVLDTLKAYANLPSFL 183 Query: 268 ELRK----KIEIVGLSQIDTVDSDTLARKKN 294 L K K + V L I T+ +DTL+ ++N Sbjct: 184 VLNKIDALKSKRVLLDLIKTLTNDTLSGQRN 214 >gi|250459250|gb|ACT09400.1| IP07271p [Drosophila melanogaster] Length = 660 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 39/184 (21%), Positives = 85/184 (46%), Gaps = 15/184 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ + Sbjct: 171 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + +R + + L H+ + + + + QC + +++ + S K I Sbjct: 230 ----LEERNVIEMQAITALAHLRACVLYFMDISEQCGHSLEEQVKLFESIKPLFTNKPLI 285 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQ---VPFEF-SSITGHGIPQILECLHDKIFSIRG 331 + +++ID + + L ++ + T+ + +P S++ G+ ++ +++ S R Sbjct: 286 LAINKIDILTPEDLPEERRAIITKLQEDKNIPVMLMSTVQETGVMEVKTEACERLLSYRV 345 Query: 332 ENEF 335 + + Sbjct: 346 DQKM 349 >gi|326390100|ref|ZP_08211661.1| GTP-binding proten HflX [Thermoanaerobacter ethanolicus JW 200] gi|325993748|gb|EGD52179.1| GTP-binding proten HflX [Thermoanaerobacter ethanolicus JW 200] Length = 413 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 7/112 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 I I+G NAGKST L ++T A+ + + F TL P +V +E IL D G I+ Sbjct: 201 IAIVGYTNAGKSTLLNALTNAEVYVENKLFATLDPTARRLVLPSGREVILIDTVGFIRKL 260 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNS 267 H L+ + +LLH++ +EE ++ + +L +L A N+ Sbjct: 261 PHDLVEAFKSTLEEVKYADLLLHVIDVTSPDMEEKIKVV-EKVLSDLGAINT 311 >gi|332374908|gb|AEE62595.1| unknown [Dendroctonus ponderosae] Length = 639 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 7/102 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ ++ Sbjct: 171 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHS- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC--ILDE 261 + +R + + L H+ + + + + QC LDE Sbjct: 230 ----LEERNVIEMQAVTALAHLKACVLYFMDLSEQCGHTLDE 267 >gi|306841837|ref|ZP_07474519.1| GTP-binding proten HflX [Brucella sp. BO2] gi|306288064|gb|EFM59461.1| GTP-binding proten HflX [Brucella sp. BO2] Length = 472 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 235 VALVGYTNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNL 294 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ ++LH+ + + A + + + L+ E + +V + Sbjct: 295 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 354 Query: 279 SQIDTVDSDTLARKKNELA--TQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A ++ G+ P S+ITG G+ ++L + +I Sbjct: 355 NKIDNLDESAREAALRLAAAGSEEGR-PIPVSAITGEGVDRLLSLIETRI 403 >gi|284991408|ref|YP_003409962.1| ribosome-associated GTPase EngA [Geodermatophilus obscurus DSM 43160] gi|284064653|gb|ADB75591.1| ribosome-associated GTPase EngA [Geodermatophilus obscurus DSM 43160] Length = 447 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 21/179 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKS+ L + + + + D TT+ P IV G +E+ D G+ + Sbjct: 184 VALVGRPNVGKSSLLNRLAKDERSVVDSVAGTTVDPVDSIVTLGGEEWRFVDTAGLRRKV 243 Query: 221 HQGAGI-------GDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 + +G+ + ++ E VLL A +E V Q ++ ++ L Sbjct: 244 NTASGMEYYASLRTEAAIQAAEVAVVLL----AADEVVSEQDQRVITQVIEAGRAL---- 295 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPF----EFSSITGHGIPQILECLHDKIFS 328 ++ ++ DT+D D + + E+ +V + S++TG G+ ++ + L + + S Sbjct: 296 -VIAFNKWDTLDEDRRHQLEREIERDLARVKWASRVNISALTGRGVDKLAQHLREALAS 353 >gi|295115512|emb|CBL36359.1| GTP-binding protein HflX [butyrate-producing bacterium SM4/1] Length = 417 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 67/163 (41%), Gaps = 12/163 (7%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKN- 219 I+G NAGKST L +T A D F TL P ++ G K +L D G I+ Sbjct: 205 AIVGYTNAGKSTLLNYLTDAGILAQDMLFATLDPTTRTLELPSGQK-ILLTDTVGFIRKL 263 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H L+ + ++LH+V ++ + + L E+ K I + Sbjct: 264 PHHLIEAFKSTLEEARYSDIILHVVDVSNPQMETQIHIVYETLRQL--EITDKTVITVFN 321 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 ++D + D + R + S+ TG GIP +LE L Sbjct: 322 KMDRLTGDVILRDFR------SDFQVKISAKTGEGIPALLETL 358 >gi|167623303|ref|YP_001673597.1| GTP-binding protein EngA [Shewanella halifaxensis HAW-EB4] gi|189037161|sp|B0TLI8|DER_SHEHH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|167353325|gb|ABZ75938.1| small GTP-binding protein [Shewanella halifaxensis HAW-EB4] Length = 490 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAHLAGYEFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L + A + AA I L + R+K Sbjct: 60 IDGTEEGIETRMAEQSLAAIEEADVVLFLTDA-RAGLTAADLAIAQHLRS-----REKTT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V +++D +D+D+ + L G+V ++ ++ G G+ ++E Sbjct: 114 FVVANKVDGIDADSACAEFWSLG--LGEV-YQMAAAQGRGVTNMIE 156 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 19/186 (10%) Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYK 206 Q+++ L +KL IIG PN GKST + + + D P TT ++ + Sbjct: 192 QKRLQDLPIKL----AIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYIPMERQGR 247 Query: 207 EFILADIPGIIKNAHQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 E++L D G+ + + + + LK E ++V+L ++ A E + + L Sbjct: 248 EYVLIDTAGVRRRSKVHETVEKFSVIKTLKAVEDSNVVLLVIDAREGIAEQDLGLLGFVL 307 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQI 318 +A + ++ +++ D +D + R K EL + G + F S++ G G+ + Sbjct: 308 NA------GRALVIAVNKWDGIDQNVKDRVKTELDRRLGFIDFARIHFISALHGTGVGHL 361 Query: 319 LECLHD 324 E + + Sbjct: 362 FESIEE 367 >gi|71279565|ref|YP_270897.1| GTP-binding protein EngA [Colwellia psychrerythraea 34H] gi|123733686|sp|Q47WC5|DER_COLP3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|71145305|gb|AAZ25778.1| GTP-binding protein EngA [Colwellia psychrerythraea 34H] Length = 498 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 12/161 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR++ +ADYP T G + FI+ D G I Sbjct: 5 VALVGRPNVGKSTLFNRLTRSRDALVADYPGLTRDRQYGQAEVEEHPFIVIDTGG-INGD 63 Query: 221 HQGAGI--GDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 QG + ++ L E +L +V A + + AA I D L N KKI +V Sbjct: 64 EQGIDVKMAEQSLMAIEEADAVLFLVDA-RDGLTAADHGIADHLRKQN----KKIFVVA- 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 ++ID + D+ + L G+ + ++ G G+ Q+L Sbjct: 118 NKIDGIHGDSAVAEFYSLG--LGEHVHQIAAAHGRGVTQLL 156 >gi|325117967|emb|CBZ53518.1| hypothetical protein NCLIV_033060 [Neospora caninum Liverpool] Length = 392 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 25/136 (18%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPK-----------------------IADYPFTTLYP 196 A + +IG P+ GKST L S+T + + Y FTTL Sbjct: 64 ARVCMIGFPSVGKSTLLNSLTATSSQPSAMTASASGPAADKDSVKVLSAVGAYEFTTLCC 123 Query: 197 NLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQ 256 + + L D+PGII+ A +G G G + + ++L I+ A +++ Q Q Sbjct: 124 QPSVFYVNNAKIQLLDLPGIIEGAAEGRGRGRQVIAVAHSCDLILVILDATKDDRQQ--Q 181 Query: 257 CILDELSAYNSELRKK 272 + EL A L K+ Sbjct: 182 LLTRELEAVGIRLNKR 197 >gi|45768853|gb|AAH67599.1| GTP binding protein 4 [Danio rerio] Length = 631 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 14/181 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA ++ Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVEVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + +R + L H+ +A+ + + QC + +L +N+ K IV Sbjct: 230 --LEERNTIEMQAITALAHLRAAVLYVMDVSEQCGHTLSQQLELFNNIRPLFANKPLIVM 287 Query: 278 LSQIDTVDSDTLARKKNEL---ATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 ++ D L+ + ++ T G E SS+T G+ Q+ D++ + R + + Sbjct: 288 ANKCDVRKISELSEENQKIFADLTAEGVDVIETSSLTEEGVMQVKTEACDRLLTHRVDTK 347 Query: 335 F 335 Sbjct: 348 M 348 >gi|297685915|ref|XP_002820517.1| PREDICTED: nucleolar GTP-binding protein 1-like, partial [Pongo abelii] Length = 561 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 100 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 156 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 157 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 188 >gi|149044388|gb|EDL97709.1| rCG42940 [Rattus norvegicus] Length = 511 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 48 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 104 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 105 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 136 >gi|76799814|ref|ZP_00781875.1| GTP-binding protein Era [Streptococcus agalactiae 18RS21] gi|76584832|gb|EAO61529.1| GTP-binding protein Era [Streptococcus agalactiae 18RS21] Length = 242 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVETVLFMVPA-DEKRGKGDDMIIERLKAAKIPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ +P +++ L D + Sbjct: 119 VINKIDKVHPDQLLEQIDDFRSQMDFKEVVP--ISALQGNNVPTLIKLLTDNL 169 >gi|219564759|dbj|BAH03915.1| GTP-binding protein [Xenopus laevis] Length = 633 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA ++ Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVEVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + +R + L H+ SA+ + + QC Sbjct: 230 --LEERNTIEMQAITALAHLRSAILYVMDISEQC 261 >gi|87199949|ref|YP_497206.1| small GTP-binding protein domain-containing protein [Novosphingobium aromaticivorans DSM 12444] gi|87135630|gb|ABD26372.1| Small GTP-binding protein domain [Novosphingobium aromaticivorans DSM 12444] Length = 426 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 8/168 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 I ++G NAGKST +T A D F TL P + ++ G ++ IL+D G I + Sbjct: 196 IALVGYTNAGKSTLFNRLTGADVMAEDLLFATLDPTMRAIRLPGVEKAILSDTVGFISDL 255 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 Q L+ V++H+ V+ L Q A + IL +L E I IV Sbjct: 256 PTQLVAAFRATLEEVTAADVIVHVRDVANLASADQKAEVEQILADLGVIG-EAGSTIPIV 314 Query: 277 -GLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECL 322 ++ D + + A +++ +A + +VP S++TG G+ +L+ L Sbjct: 315 EAWNKWDLLTPEEQAMRQDLIAAKIAEVPVVPISALTGAGVETLLDKL 362 >gi|256830786|ref|YP_003159514.1| GTP-binding proten HflX [Desulfomicrobium baculatum DSM 4028] gi|256579962|gb|ACU91098.1| GTP-binding proten HflX [Desulfomicrobium baculatum DSM 4028] Length = 540 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 16/135 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + ++G NAGKST L ++T++ + F TL P ++ +E IL D G I+ Sbjct: 381 VSLVGYTNAGKSTLLNTLTKSVVLAENKLFATLDPTSRRLRFPEDREIILTDTVGFIR-- 438 Query: 221 HQGAGIGDRF---LKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKI 273 H A + + F L+ E VL+H+ A +E VQ A + IL +LS Sbjct: 439 HLPADLREAFMATLEELESADVLVHVADASHPEMEAQVQ-AVESILRDLSIDGIP----- 492 Query: 274 EIVGLSQIDTVDSDT 288 I+ L++ID + +T Sbjct: 493 RILALNKIDRISEET 507 >gi|226948306|ref|YP_002803397.1| ferrous iron transport protein B [Clostridium botulinum A2 str. Kyoto] gi|226841769|gb|ACO84435.1| ferrous iron transport protein B [Clostridium botulinum A2 str. Kyoto] Length = 718 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I ++G PN GK+T +T + + ++P T+ G +K+ +K+ + D+PGI + Sbjct: 6 IALVGNPNCGKTTMFNYLTGSSQYVGNWPGVTVEKKEGKLKQ-HKDVKVIDLPGIYSLSP 64 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R TE+ V+++IV + LE N+ + Q + EL + I+ L Sbjct: 65 YTLEEVITRNYLITEKPEVIINIVDGTNLERNLYLSTQVM---------ELGIPV-IIAL 114 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V + K++L+ G E S++ G G ++++ Sbjct: 115 NMMDIVRKNGDIIDKDKLSKSMGCTVVETSALKGDGCKELID 156 >gi|332262471|ref|XP_003280285.1| PREDICTED: nucleolar GTP-binding protein 1 isoform 2 [Nomascus leucogenys] Length = 587 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 126 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 182 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 183 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 214 >gi|311695389|gb|ADP98262.1| small GTP-binding protein [marine bacterium HP15] Length = 432 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 85/174 (48%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +T + AD F TL P L ++ ++AD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNRITTSSVYAADQLFATLDPTLRRLELPDVGPVVMADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 ++ H+ L+ T + +LLHI+ + EEN++ + +L E+ A + + Sbjct: 257 RHLPHKLVEAFRATLEETTQATLLLHIIDSHDPRREENIEQVEE-VLAEIGADDIPM--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + ++ID +++ T ++NE + V S++TG G+ + + + +++ Sbjct: 313 --LQVFNKIDLLENFTPRVERNE---EGIPVRAWVSAVTGEGLDGLFDAIVERV 361 >gi|148242816|ref|YP_001227973.1| GTP-binding protein Era-like protein [Synechococcus sp. RCC307] gi|147851126|emb|CAK28620.1| GTP-binding protein era homolog [Synechococcus sp. RCC307] Length = 309 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 21/174 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST L + K I T L I+ + +L D PGI K Sbjct: 22 VALVGRPNVGKSTLLNQLVGEKVAITSPVAQTTRNRLRAILTTECSQLVLVDTPGIHKPH 81 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVG 277 H +G+R +K + + +V AL E + Q +LD L + +R+ + ++G Sbjct: 82 HL---LGERLVKTARNSIGEVDVVLALMDGSEPMGRGDQFVLDLLKS----IRQPV-VIG 133 Query: 278 LSQIDTVDSDTLARKKNELATQCGQV-P----FEFSSITGHGIPQILECLHDKI 326 L++ D + + ++ EL +V P FS++TG G ++E L +++ Sbjct: 134 LNKQDLIAEE----QREELNASYSEVLPDAPLLPFSALTGDGCSALVEALGERL 183 >gi|328769973|gb|EGF80016.1| hypothetical protein BATDEDRAFT_19897 [Batrachochytrium dendrobatidis JAM81] Length = 635 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 32/54 (59%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+F+ VTRA+ ++ Y FTT +G + Y + + D PGI+ Sbjct: 174 ICGYPNVGKSSFMNKVTRAEVEVQPYAFTTKSLFVGHMDYKYLRWQVIDTPGIL 227 >gi|330936977|gb|EGH41077.1| GTP-binding protein Der [Pseudomonas syringae pv. pisi str. 1704B] Length = 334 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 11/166 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR + I D T G K + +IL D GI Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60 Query: 217 IKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + H + ++ L E V+L +V A +A Y D++ + R K Sbjct: 61 SGDEHGMDEKMAEQSLLAIEEADVVLFLVDA-----RAGYTA-ADQMIGEHLRKRNKRSY 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 V ++ID +D + LAR + +P + G GI Q+LE Sbjct: 115 VVANKIDNID-ENLARAEFSPMGLGDAIP--VAGAHGRGISQMLEI 157 >gi|71278353|ref|YP_267092.1| GTP-binding protein HflX [Colwellia psychrerythraea 34H] gi|71144093|gb|AAZ24566.1| GTP-binding protein HflX [Colwellia psychrerythraea 34H] Length = 428 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 12/130 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKN- 219 + ++G NAGKST ++T++ AD F TL P L + G ILAD G I++ Sbjct: 200 LSLVGYTNAGKSTLFNTLTQSDVYAADQLFATLDPTLRKIDLFGVGRVILADTVGFIRHL 259 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKKIEI 275 H L T +LLH+V + EN++ + +L E+ A + ++ Sbjct: 260 PHDLVAAFKATLTETREAELLLHVVDISDDRRSENIEQV-EYVLKEIEANDVP-----QL 313 Query: 276 VGLSQIDTVD 285 + ++ID +D Sbjct: 314 IICNKIDNLD 323 >gi|332262473|ref|XP_003280286.1| PREDICTED: nucleolar GTP-binding protein 1 isoform 3 [Nomascus leucogenys] Length = 518 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 57 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 113 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 114 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 145 >gi|330971556|gb|EGH71622.1| GTP-binding protein HflX [Pseudomonas syringae pv. aceris str. M302273PT] Length = 433 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 2/103 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST SVT + AD F TL P L ++ + +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNSVTDSDVFAADQLFATLDPTLRRLQLDDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL 259 ++ H+ L+ + + +LLH++ + E + + + ++ Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDSHEPDRMSQIEQVM 300 >gi|163736360|ref|ZP_02143779.1| GTP-binding protein, HSR1-related [Phaeobacter gallaeciensis BS107] gi|161390230|gb|EDQ14580.1| GTP-binding protein, HSR1-related [Phaeobacter gallaeciensis BS107] Length = 423 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 13/180 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKN 219 + ++G NAGKST +T A+ D F TL P + V+ +G E IL+D G I + Sbjct: 205 VALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVQLPDG-PEIILSDTVGFISD 263 Query: 220 AHQGAGIGDR-FLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEI 275 R L+ V++H+ +S E QAA + IL L +S R ++E+ Sbjct: 264 LPTELVAAFRATLEEVLAADVVVHVRDISHDETQNQAADVESILASLGVDDS--RARLEV 321 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 +++D +D + ++ + G S+I+G G+ +L + ++ IR E+E Sbjct: 322 --WNKLDLLDDEQAEARRQRAEREDG--IHAISAISGEGLEDLLADITSQLRLIRHEDEI 377 >gi|89895851|ref|YP_519338.1| hypothetical protein DSY3105 [Desulfitobacterium hafniense Y51] gi|89335299|dbj|BAE84894.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 303 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 8/132 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PNAGKST L + K I +D P TT I+ E + + D PGI K Sbjct: 15 VTVVGRPNAGKSTLLNQLLGQKILIMSDKPQTTRNKIHCILTEERGQIVFLDTPGIHKPK 74 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H+ G + D L+ ++L++V E A + IL+ L + I+ L+ Sbjct: 75 HKLGEFMVDSALESLREVDLILYMVDTTAE-FGAGEEYILENLKHVKTPC-----ILLLN 128 Query: 280 QIDTVDSDTLAR 291 +ID ++ D L + Sbjct: 129 KIDLIEKDKLLK 140 >gi|15223676|ref|NP_175505.1| GTP-binding protein-related [Arabidopsis thaliana] gi|17368724|sp|Q9C6I8|NOG1_ARATH RecName: Full=Nucleolar GTP-binding protein 1 gi|12321793|gb|AAG50935.1|AC079284_10 GTP-binding protein, putative [Arabidopsis thaliana] gi|332194480|gb|AEE32601.1| putative nucleolar GTP-binding protein 1 [Arabidopsis thaliana] Length = 671 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + I G PN GKS+F+ VTRA + Y FTT +G Y + + D PGI+ Sbjct: 171 VLICGYPNVGKSSFMNKVTRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPF 230 Query: 222 QGAGI 226 + I Sbjct: 231 EDRNI 235 >gi|262274783|ref|ZP_06052594.1| GTP-binding protein EngA [Grimontia hollisae CIP 101886] gi|262221346|gb|EEY72660.1| GTP-binding protein EngA [Grimontia hollisae CIP 101886] Length = 501 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 10/133 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G G EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGKALLGEHEFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L +V A + DE A + R+K Sbjct: 60 IDGTEEGVETKMAEQSLAAIEEADVVLFMVDG------RAGLTVADEAIAQHLRSRQKKT 113 Query: 275 IVGLSQIDTVDSD 287 + ++++D +D D Sbjct: 114 FLVVNKVDGIDPD 126 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 17/172 (9%) Query: 163 GIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 IIG PN GKST + + + D P TT ++ +E+++ D G+ + Sbjct: 214 SIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVIIDTAGVRRRKR 273 Query: 222 QGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + ++F LK E +V+L ++ A E + L+A S ++ Sbjct: 274 VNDKV-EKFSVVQTLKAIEDANVVLLVIDARENISDQDLSLLGFALNAGRSI------VI 326 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +DSD R K+EL + G V F S++ G G+ + E + + Sbjct: 327 AVNKWDGLDSDVKERVKSELDRRLGFVDFARIHFISALHGTGVGHLFESIQE 378 >gi|163741105|ref|ZP_02148497.1| GTP-binding protein HflX [Phaeobacter gallaeciensis 2.10] gi|161385458|gb|EDQ09835.1| GTP-binding protein HflX [Phaeobacter gallaeciensis 2.10] Length = 423 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 13/180 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKN 219 + ++G NAGKST +T A+ D F TL P + V+ +G E IL+D G I + Sbjct: 205 VALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVQLPDG-PEIILSDTVGFISD 263 Query: 220 AHQGAGIGDR-FLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEI 275 R L+ V++H+ +S E QAA + IL L +S R ++E+ Sbjct: 264 LPTELVAAFRATLEEVLAADVVVHVRDISHDETQNQAADVESILASLGVDDS--RARLEV 321 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 +++D +D + ++ + G S+I+G G+ +L + ++ IR E+E Sbjct: 322 --WNKLDLLDDEQAEARRQRAEREDG--IHAISAISGEGLEDLLADITSQLRLIRHEDEI 377 >gi|320094006|ref|ZP_08025831.1| GTP-binding protein [Actinomyces sp. oral taxon 178 str. F0338] gi|319979050|gb|EFW10568.1| GTP-binding protein [Actinomyces sp. oral taxon 178 str. F0338] Length = 500 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 69/168 (41%), Gaps = 8/168 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I G NAGKST L +T A + D F TL P + + +E+ L D G + Sbjct: 275 VPSVAIAGYTNAGKSTLLNRLTDAGVLVEDALFATLDPTVRRARTADGREYTLTDTVGFV 334 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +N Q L+ VLLH+V A + + + + LS R E++ Sbjct: 335 RNLPTQLVEAFRSTLEEVGAADVLLHVVDAAHPDPVSQVEAVRAVLSGIEGADRVP-ELI 393 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 L++ D + LA + S+ TG+G+ + L D Sbjct: 394 ALNKADLATPEQLAVLRTAFPGSVA-----LSAKTGYGVGTLRAALED 436 >gi|237654041|ref|YP_002890355.1| GTP-binding proten HflX [Thauera sp. MZ1T] gi|237625288|gb|ACR01978.1| GTP-binding proten HflX [Thauera sp. MZ1T] Length = 385 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 19/184 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL---YPNLGIVKEGY-KEFILADIP 214 + + ++G NAGKST ++T+A AD F TL L + EG +L+D Sbjct: 197 VLSVSLVGYTNAGKSTLFNALTKAGAYAADQLFATLDTTSRRLYVGGEGAGASVVLSDTV 256 Query: 215 GIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELR 270 G I++ H L+ T + +LLH+V + E+ A A +L E+ A + Sbjct: 257 GFIRDLPHALVAAFQATLEETAQADLLLHVVDSASEDRDAQIGAVNQVLAEIGAADVP-- 314 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILECLHDKIFSI 329 +I+ ++ID + + + CG + F S+ TG G+ + + L + Sbjct: 315 ---QILVWNKIDLTRAAAAVERGD-----CGTIRRIFLSARTGEGLDLLRDALAEVARQT 366 Query: 330 RGEN 333 G+N Sbjct: 367 FGDN 370 >gi|73668134|ref|YP_304149.1| ferrous iron transport protein B [Methanosarcina barkeri str. Fusaro] gi|72395296|gb|AAZ69569.1| ferrous iron transport protein B [Methanosarcina barkeri str. Fusaro] Length = 637 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 5/93 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I IG P+ GKS F + +T ++++YP TT+ GIVK K + D+PGI + Sbjct: 3 IAFIGNPSVGKSVFFSRLTGVGVEVSNYPGTTVALKKGIVKARGKTIEIVDLPGIYSLGV 62 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEEN 250 ++ + RFL +R V++++V A LE N Sbjct: 63 TNEDEKVTKRFLIE-DRPDVIINVVDASRLERN 94 >gi|326797796|ref|YP_004315615.1| GTP-binding protein Era-like-protein [Sphingobacterium sp. 21] gi|326548560|gb|ADZ76945.1| GTP-binding protein Era-like-protein [Sphingobacterium sp. 21] Length = 292 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 9/163 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PNAGKST + S+ K I TT + LGIV E + + +D PG+IK A Sbjct: 8 VSIVGKPNAGKSTLMNSLVGEKMSIVTPKAQTTRHRILGIVNEEDYQIVFSDTPGVIKPA 67 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 + F+ + ++ V+ + E ++++L +S + +V +++ Sbjct: 68 YSLQESMMNFVHGSLVDADIILFVTDINEKYDET--DVIEKLQKTDSPV-----VVLVNK 120 Query: 281 IDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECL 322 ID + D + K N F S++ GH I + + + Sbjct: 121 IDKSNEDDVKAKINYWQETLDPTAIFAISALLGHNIQAVFQFV 163 >gi|4191616|gb|AAD09830.1| GTP-binding protein NGB [Homo sapiens] Length = 633 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|46198506|ref|YP_004173.1| GTP-binding protein hflX [Thermus thermophilus HB27] gi|46196128|gb|AAS80546.1| GTP-binding protein hflX [Thermus thermophilus HB27] Length = 550 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 17/173 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK----EFILADIPGII 217 + ++G NAGK+T L ++TRA + D F TL P + + G+ E + D G I Sbjct: 379 VAVVGYTNAGKTTLLRALTRAGEEGEDKLFATLRP---LTRRGFLPGVGEVLFTDTVGFI 435 Query: 218 KNAHQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ + R L+ VL+H++ A EE ++ + D L E ++ Sbjct: 436 RHMPEELLTAFRATLEEVREADVLVHVLDASEEGALERHRVVRDLLLDLGVE---APVVL 492 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 L++ D L L + G VP S++ G G+ ++ E L + + Sbjct: 493 ALNKADRAAPYDL----YFLGERLGGVP--VSALKGTGLKELKEALARALLDL 539 >gi|15242912|ref|NP_200604.1| GTP-binding family protein [Arabidopsis thaliana] gi|9758365|dbj|BAB08866.1| GTP binding protein-like [Arabidopsis thaliana] gi|332009595|gb|AED96978.1| GTP-binding protein, HflX [Arabidopsis thaliana] Length = 540 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 18/172 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + ++G NAGKST L +T A + F TL P V+ + KEF+L D G I+ Sbjct: 312 VSLVGYTNAGKSTLLNQLTGANVLAENRLFATLDPTTRRVQMQNGKEFLLTDTVGFIQKL 371 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIV 276 R L+ + +L+H+V L E A + ++ EL S + K +V Sbjct: 372 PTTLVAAFRATLEEIAESSLLVHVVDISHPLAEQQIEAVEKVMSELDV--SSIPK---LV 426 Query: 277 GLSQIDTVDSDTLARKKNELA--TQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++D VD + + E T C S++TG G+ +H+K+ Sbjct: 427 VWNKVDRVDDPQKVKLEAEETGDTIC------ISALTGEGLDDFCNAVHEKL 472 >gi|322805356|emb|CBZ02920.1| ferrous iron transport protein B [Clostridium botulinum H04402 065] Length = 718 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I ++G PN GK+T +T + + ++P T+ G +K+ +K+ + D+PGI + Sbjct: 6 IALVGNPNCGKTTMFNYLTGSSQYVGNWPGVTVEKKEGKLKQ-HKDVKVIDLPGIYSLSP 64 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R TE+ V+++IV + LE N+ + Q + EL + I+ L Sbjct: 65 YTLEEVITRNYLITEKPEVIINIVDGTNLERNLYLSTQVM---------ELGIPV-IIAL 114 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V + K++L+ G E S++ G G ++++ Sbjct: 115 NMMDIVRKNGDIIDKDKLSKSMGCTVVETSALKGDGCKELID 156 >gi|301777788|ref|XP_002924312.1| PREDICTED: nucleolar GTP-binding protein 1-like [Ailuropoda melanoleuca] Length = 634 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|297848712|ref|XP_002892237.1| hypothetical protein ARALYDRAFT_470457 [Arabidopsis lyrata subsp. lyrata] gi|297338079|gb|EFH68496.1| hypothetical protein ARALYDRAFT_470457 [Arabidopsis lyrata subsp. lyrata] Length = 671 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + I G PN GKS+F+ VTRA + Y FTT +G Y + + D PGI+ Sbjct: 171 VLICGYPNVGKSSFMNKVTRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPF 230 Query: 222 QGAGI 226 + I Sbjct: 231 EDRNI 235 >gi|187928158|ref|YP_001898645.1| GTP-binding proten HflX [Ralstonia pickettii 12J] gi|187725048|gb|ACD26213.1| GTP-binding proten HflX [Ralstonia pickettii 12J] Length = 417 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 12/175 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST ++T+A+ A+ F TL + + EG +L+D G I++ Sbjct: 204 VSLVGYTNAGKSTLFNALTKARAYAANQLFATLDTTSRRLYLEGLGNVVLSDTVGFIRDL 263 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV---SALEENVQAAYQCILDELSAYNSELRKKIEIV 276 Q L+ T VLLH+V S ++ +LDE++A +I+ Sbjct: 264 PTQLVAAFRATLEETVHADVLLHVVDAASTVKHEQMEQVDRVLDEINASGIP-----QIL 318 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILECLHDKIFSIR 330 +++ID + A + E + G V F S+I G G+ + E L + +R Sbjct: 319 VMNKIDAAEELRAAGPRIE-RDETGAVRRVFVSAIEGTGLDLLREALVETAIRLR 372 >gi|296825344|ref|XP_002850800.1| developmentally regulated GTP-binding protein [Arthroderma otae CBS 113480] gi|238838354|gb|EEQ28016.1| developmentally regulated GTP-binding protein [Arthroderma otae CBS 113480] Length = 377 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 10/96 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKI----------ADYPFTTLYPNLGIVKEGYKEF 208 +A +G IG P+ GKST ++ +T + A Y FTTL G V+ + Sbjct: 63 VASVGFIGFPSVGKSTLMSKLTGQHSEALGADTWYHTAAAYEFTTLTTVPGQVQYNGAKI 122 Query: 209 ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 + D+PGII+ A G G G + + + H++ ++ Sbjct: 123 QMLDLPGIIQGAKDGKGRGRQVIAVAKTCHLIFIVL 158 >gi|92113756|ref|YP_573684.1| GTP-binding protein Era [Chromohalobacter salexigens DSM 3043] gi|91796846|gb|ABE58985.1| GTP-binding protein Era [Chromohalobacter salexigens DSM 3043] Length = 299 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI-IKN 219 + I+G PN GKST + + K I P TT + +GI EG +FI D PG+ I+ Sbjct: 8 VAIVGRPNVGKSTLMNRILGQKISITSRRPQTTRHQVMGIKTEGETQFIYVDTPGMHIQT 67 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI 243 + I +RF+ TH L I Sbjct: 68 RDRNKAI-NRFMNQAA-THALRDI 89 >gi|303328286|ref|ZP_07358724.1| GTP-binding protein HflX [Desulfovibrio sp. 3_1_syn3] gi|302861616|gb|EFL84552.1| GTP-binding protein HflX [Desulfovibrio sp. 3_1_syn3] Length = 565 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 19/173 (10%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAH 221 ++G NAGKST L +TR+ + F TL P ++ +E ILAD G I+N Sbjct: 390 ALVGYTNAGKSTLLNRLTRSDVLAENKLFATLDPTTRRLRFPAEREIILADTVGFIRNLP 449 Query: 222 QGAGIGDRF---LKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKIEI 275 + + D F L+ E +L+H+ A ++ +A + IL E+ EL + + Sbjct: 450 K--ELMDAFRATLEELEAADLLVHVADASHPDLLQQISAVETILAEM-----ELDRVPRL 502 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 + L++ D + + A ELA + S+ +G G+ +LE L + + Sbjct: 503 LVLNKWDQLAAPARA----ELA-DAFPLALPVSAKSGDGLNYLLEQLETDLLT 550 >gi|163760594|ref|ZP_02167675.1| GTP-binding protein Era [Hoeflea phototrophica DFL-43] gi|162282209|gb|EDQ32499.1| GTP-binding protein Era [Hoeflea phototrophica DFL-43] Length = 312 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 37/178 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI---- 216 + +IG PNAGKST + + AK I + TT GI + + D PGI Sbjct: 23 VALIGAPNAGKSTLVNQLVGAKVSIVSHKVQTTRAIVRGIAIHERAQIVFIDTPGIFAPK 82 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 + A GA GD ++L ++ A E ++ + +LD L+ + Sbjct: 83 RRLDRAMVTTAWGGAKDGD----------MVLVLIDA-ERGIKGDAEALLDSLADVHQR- 130 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP-----FEFSSITGHGIPQILECL 322 +I+ L+++D V DTL L QC + F S++TG G +++ L Sbjct: 131 ----KILVLNKVDRVKRDTLL----ALTAQCHEKAQFDETFMISALTGSGCADLMDYL 180 >gi|39935664|ref|NP_947940.1| GTP-binding protein HSR1-related [Rhodopseudomonas palustris CGA009] gi|39649517|emb|CAE28039.1| GTP binding protein-like [Rhodopseudomonas palustris CGA009] Length = 424 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 3/172 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST +TRA + AD F TL P L ++ + + +L+D G I N Sbjct: 194 VALVGYTNAGKSTLFNRLTRADVQAADMLFATLDPTLRAIQLPHGGKAMLSDTVGFISNL 253 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 Q L+ ++LH+ E+ +A + + L + + + Sbjct: 254 PTQLVAAFRATLEEVLEADLILHVRDISHEDAEAQQHDVDNVLRQLGVDAASGRIVEVWN 313 Query: 280 QIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLHDKIFSIR 330 +ID + + KN A + P S+++G G+ ++L + ++ + R Sbjct: 314 KIDRFEPEQRDELKNIAARRPEDHPCLLVSAVSGEGVDELLLSIEQRLAATR 365 >gi|302789099|ref|XP_002976318.1| hypothetical protein SELMODRAFT_443180 [Selaginella moellendorffii] gi|300155948|gb|EFJ22578.1| hypothetical protein SELMODRAFT_443180 [Selaginella moellendorffii] Length = 432 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 35/56 (62%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + ++G PN GKS+ + ++ KP++ +YPFTT ++G + + + + D PG++ Sbjct: 245 LCLVGAPNVGKSSLVRVLSTGKPEVCNYPFTTRAISMGHIMDYAFSYQVTDTPGLL 300 >gi|256825566|ref|YP_003149526.1| GTP-binding proten HflX [Kytococcus sedentarius DSM 20547] gi|256688959|gb|ACV06761.1| GTP-binding proten HflX [Kytococcus sedentarius DSM 20547] Length = 517 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 19/177 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I G NAGKS+ L +TRA + + F TL P + + + F LAD G + Sbjct: 292 VPSVVIAGYTNAGKSSLLNRLTRAGVLVENQLFATLDPTVRRTETADGRVFTLADTVGFV 351 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSAL----EENVQAAYQC---ILDELSAYNSEL 269 ++ HQ L+ ++LH+V E + A + +LDE A + Sbjct: 352 RSLPHQLVEAFRSTLEEVADADLVLHVVDGSHPDPENQISAVREVLSEVLDEKGADSMN- 410 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI+ +++ D D + +AR L T+ + S+ TG GI ++ E + ++ Sbjct: 411 ----EIIVINKADAADPEVVARL---LRTEKRSIA--VSARTGQGITELRELVESEL 458 >gi|169614856|ref|XP_001800844.1| hypothetical protein SNOG_10578 [Phaeosphaeria nodorum SN15] gi|160702835|gb|EAT81972.2| hypothetical protein SNOG_10578 [Phaeosphaeria nodorum SN15] Length = 368 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 14/93 (15%) Query: 162 IGIIGLPNAGKSTFL--------ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI--LA 211 I ++G P++GKST L A+ ++D PN G +G + L Sbjct: 7 IALVGKPSSGKSTTLNRAIGYLQIECACARVGVSD----RCKPNYGSCIDGRRSVPIELL 62 Query: 212 DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 D+ G++ AH G G+G+RFL L+H+V Sbjct: 63 DVAGLVPGAHMGKGLGNRFLDDLRHADALVHVV 95 >gi|159484917|ref|XP_001700498.1| ERA-like protein, small ras-type GTPase [Chlamydomonas reinhardtii] gi|158272250|gb|EDO98053.1| ERA-like protein, small ras-type GTPase [Chlamydomonas reinhardtii] Length = 439 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 + +IG PNAGKST + ++ K I Y P TT + +GI+ E + IL D PG+I+ Sbjct: 161 VAVIGKPNAGKSTLINALVGQKLSIVTYKPQTTRHRVMGILSERDYQMILFDTPGVIEK 219 >gi|148259271|ref|YP_001233398.1| GTP-binding protein Era [Acidiphilium cryptum JF-5] gi|146400952|gb|ABQ29479.1| tRNA modification GTPase trmE [Acidiphilium cryptum JF-5] Length = 295 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 72/173 (41%), Gaps = 27/173 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PNAGKST L AK I TT + GIV G + +L D PGI Sbjct: 8 VALLGRPNAGKSTLLNQAIGAKVSIVTPKAQTTRFRISGIVMRGGDQIVLVDTPGIFAPK 67 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC-ILDELSAYNSELRKKIEIVG-- 277 + DR + + +A E A C I+D A +L + IE + Sbjct: 68 RR----LDRAM-----------VAAAWEGVAGADLACLIVDAAKADPDDLAEPIEALAAT 112 Query: 278 -------LSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECL 322 L++ID + D L LA Q G F S++ G+ ++L+ L Sbjct: 113 GRPRWLILNKIDLLPRDKLLPLAETLARQGGFAEVFMISALKRDGVDRLLDAL 165 >gi|70732274|ref|YP_262030.1| GTP-binding protein EngA [Pseudomonas fluorescens Pf-5] gi|123653208|sp|Q4K6V3|DER_PSEF5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|68346573|gb|AAY94179.1| GTP-binding protein EngA [Pseudomonas fluorescens Pf-5] Length = 490 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 11/166 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR + I D T G K + +IL D GI Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRTYILIDTGGI 60 Query: 217 IKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + H + ++ L E V+L +V A + AA Q I + L R K Sbjct: 61 SGDEHGMDEKMAEQSLLAIEEADVVLFLVDA-KAGFTAADQMIGEHLRK-----RNKTSY 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 V +++D +D D +AR + +P + G GI Q+LE Sbjct: 115 VIANKVDNIDPD-MARAEFAPLGMGDAIP--IAGAHGRGITQMLEI 157 >gi|39939111|ref|NP_950877.1| GTP-binding protein Era [Onion yellows phytoplasma OY-M] gi|39722220|dbj|BAD04710.1| glycyl-tRNA synthetase [Onion yellows phytoplasma OY-M] Length = 295 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I+G PN GKST L ++T+ K I P TT + +GI E ++I D PGI + Sbjct: 12 IAILGRPNVGKSTLLNALTQQKVAITSAKPQTTRHKIIGICHEPNAQYIFVDTPGINQYK 71 Query: 221 H 221 H Sbjct: 72 H 72 >gi|55953087|ref|NP_036473.2| nucleolar GTP-binding protein 1 [Homo sapiens] gi|17368711|sp|Q9BZE4|NOG1_HUMAN RecName: Full=Nucleolar GTP-binding protein 1; AltName: Full=Chronic renal failure gene protein; AltName: Full=GTP-binding protein NGB gi|13160988|gb|AAK13444.1|AF325353_1 G protein-binding protein CRFG [Homo sapiens] gi|25058815|gb|AAH38975.1| GTP binding protein 4 [Homo sapiens] gi|55959414|emb|CAI13664.1| GTP binding protein 4 [Homo sapiens] gi|95106278|gb|ABF55254.1| GTP binding protein 4 [Homo sapiens] gi|119606932|gb|EAW86526.1| GTP binding protein 4, isoform CRA_a [Homo sapiens] Length = 634 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|254284081|ref|ZP_04959049.1| GTP-binding protein HflX [gamma proteobacterium NOR51-B] gi|219680284|gb|EED36633.1| GTP-binding protein HflX [gamma proteobacterium NOR51-B] Length = 416 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 10/112 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + ++G NAGKS+ VT A AD F TL P L GI + + +LAD G I A Sbjct: 201 VSLVGYTNAGKSSLFNRVTEAAVYAADKLFATLDPTLRGIEIDHLGKVVLADTVGFI--A 258 Query: 221 HQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 H + + F L+ T +LLH++ + E+ ++DE+ + +E+ Sbjct: 259 HLPHTLVEAFKATLEETLNATLLLHVIDIVAED----RDYLVDEVESVLAEI 306 >gi|7022875|dbj|BAA91752.1| unnamed protein product [Homo sapiens] gi|193786048|dbj|BAG50937.1| unnamed protein product [Homo sapiens] Length = 634 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|237800048|ref|ZP_04588509.1| GTP-binding protein Der [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022903|gb|EGI02960.1| GTP-binding protein Der [Pseudomonas syringae pv. oryzae str. 1_6] Length = 222 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 11/166 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR + I D T G K + +IL D GI Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60 Query: 217 IKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + H + ++ L E V+L +V A +A Y D++ + R K Sbjct: 61 SGDEHGMDEKMAEQSLLAIEEADVVLFLVDA-----RAGYTA-ADQMIGEHLRKRNKRSY 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 V ++ID +D + LAR + +P + G GI Q+LE Sbjct: 115 VVANKIDNID-ENLARAEFSPMGLGDAIP--VAGAHGRGISQMLEI 157 >gi|62897281|dbj|BAD96581.1| G protein-binding protein CRFG variant [Homo sapiens] Length = 634 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|330720972|gb|EGG99139.1| GTP-binding protein HflX [gamma proteobacterium IMCC2047] Length = 426 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 11/172 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + G NAGKST +T A D F TL P + ++ EG +LAD G I Sbjct: 198 IPTASLAGYTNAGKSTLFNRLTDASVYAQDQLFATLDPTMRRLEVEGVGSVVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ H+ L+ +LLH++ A +EN + + D L ++ + ++ Sbjct: 258 RHLPHKLVEAFRATLQEAAEASLLLHVIDAADENRDGNIEQVNDVLREIKAD--EVPSLL 315 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQILECLHDKI 326 ++ID ++ D L R L VP S+ TG GI +L+ + +++ Sbjct: 316 VYNKIDLIE-DKLPR----LDRDDQGVPRRVWVSAETGAGIDLLLQAIGERL 362 >gi|326387677|ref|ZP_08209283.1| GTP-binding protein Era [Novosphingobium nitrogenifigens DSM 19370] gi|326207723|gb|EGD58534.1| GTP-binding protein Era [Novosphingobium nitrogenifigens DSM 19370] Length = 312 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 21/163 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST + ++ K I T L GI EG + IL D PG+ + Sbjct: 23 VAVIGAPNAGKSTLVNALVGQKVAIVSSKAQTTRARLMGIALEGPAQIILVDTPGLFEPR 82 Query: 221 HQGAGIGDRFLKH-----TERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE- 274 + DR + H E ++ +V A ++ D L + L+++ E Sbjct: 83 RR----LDRAMVHAAWEGAEAADAIVLVVDARKKK--------RDYLEGILATLKERPER 130 Query: 275 -IVGLSQIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGI 315 I+ L+++D+ + L ELA G F S++TG G+ Sbjct: 131 RILVLNKVDSTAKEPLLVAAQELAAAGGFDEVFFVSALTGDGV 173 >gi|313801893|gb|EFS43127.1| GTP-binding protein HflX [Propionibacterium acnes HL110PA2] gi|314962812|gb|EFT06912.1| GTP-binding protein HflX [Propionibacterium acnes HL082PA1] Length = 493 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 11/167 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I+G NAGKS+ L +TRA + + F TL P +G + + L D G Sbjct: 272 VPSVAIVGYTNAGKSSLLNRLTRAGVLVENALFATLDPTTRRATTSDG-RVYTLTDTVGF 330 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 +++ H L+ T VLLH+V A + + + LS + EI Sbjct: 331 VRHLPHDLVEAFASTLEETAMAEVLLHVVDADDPDPLGQVDAVRGVLSGIGAS--NIPEI 388 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + L++ID + +T+ ++ + S+ TG GI +++E + Sbjct: 389 LVLNKIDRLSDETILTLRSTFPG-----AYLVSAHTGEGIDKLVEAI 430 >gi|262373437|ref|ZP_06066715.1| GTP-binding protein HflX [Acinetobacter junii SH205] gi|262311190|gb|EEY92276.1| GTP-binding protein HflX [Acinetobacter junii SH205] Length = 449 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 7/112 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST + ++ AD F TL P L ++ +G +LAD G + Sbjct: 199 IPTISLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLADTVGFV 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSA 264 +N H L+ T +LLH++ + ++E ++A + +L E+ A Sbjct: 259 RNLQHDLVESFKATLEETLEATLLLHVIDSNSPNMDEQIEAV-ESVLKEIGA 309 >gi|144899310|emb|CAM76174.1| Fe2+ transport system protein B [Magnetospirillum gryphiswaldense MSR-1] Length = 786 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 24/162 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I ++G PN GK+T ++T A K+ ++P T+ +G + + + L D+PGI Sbjct: 5 IAVVGNPNCGKTTLFNALTGASQKVGNWPGVTVEKKVGQFRHAGEAYDLVDLPGIYMIGG 64 Query: 222 QGAGIGDRFLKH----TERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEI 275 AG D + + V+++I+ A LE N+ Q + E+R + I Sbjct: 65 YSAGSQDERVARDYILSGEPKVVVNILDAFNLERNLYLTCQLL---------EMRVPV-I 114 Query: 276 VGLSQIDT-----VDSDTLARKKNELATQCGQVPFEFSSITG 312 V L+ +D ++ D A K C VP S TG Sbjct: 115 VALNMMDLAKKTGIEIDCAALSK---VLDCPVVPLVASRSTG 153 >gi|225019340|ref|ZP_03708532.1| hypothetical protein CLOSTMETH_03293 [Clostridium methylpentosum DSM 5476] gi|224947971|gb|EEG29180.1| hypothetical protein CLOSTMETH_03293 [Clostridium methylpentosum DSM 5476] Length = 646 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 14/145 (9%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNA 220 ++G PN GK+ ++T + + ++P T+ G VK GYK +LAD+PGI + + Sbjct: 6 ALLGNPNCGKTMLFNALTGSNQYVGNWPGVTVERKEGRVK-GYKNILLADLPGIYSLSSY 64 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNS-----ELRK-- 271 I F+ ER V++ IV + LE N+ Q I E+ + E+RK Sbjct: 65 SLEEKISRDFILK-ERPDVIIDIVDGTNLERNLYLTLQAIETEVPVVVAVNMMDEVRKRG 123 Query: 272 -KIEIVGLSQIDTVDSDTLARKKNE 295 +++ LS + V ++ KK E Sbjct: 124 DRLDCARLSALLGVPVVPISAKKKE 148 >gi|119606934|gb|EAW86528.1| GTP binding protein 4, isoform CRA_c [Homo sapiens] Length = 634 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|310779271|ref|YP_003967604.1| GTP-binding protein Era [Ilyobacter polytropus DSM 2926] gi|309748594|gb|ADO83256.1| GTP-binding protein Era [Ilyobacter polytropus DSM 2926] Length = 298 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 15/168 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST + K I +D TT GI+ G ++I D PGI K Sbjct: 6 IAVVGRPNVGKSTLTNKLVNEKVAIVSDKAGTTRDSIKGILNHGGNQYIFIDTPGIHKPK 65 Query: 221 H----QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H + R LK E V++ ++ +E + + ++D + E K I+ Sbjct: 66 HLLGEHMTNVAVRSLKEVE---VIMFVLDGSQE-ISTGDKYVMDRI----LEADKTPRIL 117 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECL 322 +++ID + + + KK E+ + G E S+ G+ +++E + Sbjct: 118 IVNKIDKMSDEEIKVKKAEIEEKLGTFDRIVELSAEYSIGMYRVIEAI 165 >gi|121602372|ref|YP_988930.1| GTP-binding proten HflX [Bartonella bacilliformis KC583] gi|120614549|gb|ABM45150.1| GTP-binding proten HflX [Bartonella bacilliformis KC583] Length = 457 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 6/162 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 I ++G NAGKST ++ A D F TL P L + Y K +L+D G I N Sbjct: 222 IALVGYTNAGKSTLFNRLSGANILTKDMLFATLDPTLRKITLPYGKTVLLSDTVGFISNL 281 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 H A L+ +++H+ + + Q Q +L+ LS+ ++ K I+ + Sbjct: 282 PTHLIAAFRAT-LEEVIEADLIIHVRDISDPDHQFHAQDVLEILSSLGIDINDKGRIIEV 340 Query: 279 -SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 ++ID +D L + T S++TG G+ Q+L Sbjct: 341 WNKIDILDQHVLNALQMNTKTLLNP-ALMVSALTGEGLKQLL 381 >gi|300797382|ref|NP_001179530.1| nucleolar GTP-binding protein 1 [Bos taurus] gi|297481634|ref|XP_002692241.1| PREDICTED: GTP binding protein 4 [Bos taurus] gi|296481337|gb|DAA23452.1| GTP binding protein 4 [Bos taurus] Length = 634 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|170037268|ref|XP_001846481.1| nucleolar GTP-binding protein [Culex quinquefasciatus] gi|167880315|gb|EDS43698.1| nucleolar GTP-binding protein [Culex quinquefasciatus] Length = 348 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 32/56 (57%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I I G PN GKS+F+ VTRA ++ Y FTT +G + Y + + D PGI+ Sbjct: 196 IIICGFPNVGKSSFINKVTRADVEVQPYAFTTKSLYVGHMDYKYLRWQVIDTPGIL 251 >gi|119606933|gb|EAW86527.1| GTP binding protein 4, isoform CRA_b [Homo sapiens] Length = 631 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|104783871|ref|YP_610369.1| hypothetical protein PSEEN4942 [Pseudomonas entomophila L48] gi|95112858|emb|CAK17586.1| conserved hypothetical protein HflX [Pseudomonas entomophila L48] Length = 433 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T+++ AD F TL P L ++ +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNALTQSEVYAADQLFATLDPTLRRLELADLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ + + +LLH++ A E + + +L L +E Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDAHEPDRMEQIEQVLAVLGEIGAE 309 >gi|21707262|gb|AAH33784.1| GTPBP4 protein [Homo sapiens] Length = 632 Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 171 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 227 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 228 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 259 >gi|288574808|ref|ZP_06393165.1| GTP-binding protein Era [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570549|gb|EFC92106.1| GTP-binding protein Era [Dethiosulfovibrio peptidovorans DSM 11002] Length = 309 Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 2/108 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKS+ + ++ R K I + P TT I + + D PGI K Sbjct: 15 VAVVGRPNVGKSSLVNALLRCKATIVSPKPQTTRNRIRCIADVEGGQIVFTDTPGIHKPQ 74 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS 267 H+ G I D L + ++L+++SA +E + + I++ L N+ Sbjct: 75 HRLGEAIVDSALVALDDADLILYVISAQDEGITGQDRHIIERLKNSNT 122 >gi|289581243|ref|YP_003479709.1| GTP-binding protein HSR1-related protein [Natrialba magadii ATCC 43099] gi|289530796|gb|ADD05147.1| GTP-binding protein HSR1-related protein [Natrialba magadii ATCC 43099] Length = 331 Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 21/168 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ VT A+ + A YPFTT +G + + + D PG++ Sbjct: 162 IVVAGYPNVGKSSFVNDVTSARGETASYPFTTKGIGVGHFEHEHIRHQIVDTPGLL---- 217 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG--LS 279 DR ER + VSA+ E++ ++D + L ++E+ + Sbjct: 218 ------DR--PPAERNEIESQAVSAI-EHLADCMLVMVDPSAECGYPLASQLELRDSIAA 268 Query: 280 QIDTVDSDTLARKKNEL-ATQCGQV-----PFEFSSITGHGIPQILEC 321 Q +TV T+A K + A Q+ +E S TG + +LE Sbjct: 269 QFETVPVLTIANKVDRAEAWDDSQIDALNADYEMSVETGENVETVLEA 316 >gi|254413882|ref|ZP_05027651.1| GTP-binding proten HflX, putative [Microcoleus chthonoplastes PCC 7420] gi|196179479|gb|EDX74474.1| GTP-binding proten HflX, putative [Microcoleus chthonoplastes PCC 7420] Length = 532 Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 13/146 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE------FILAD 212 + I ++G NAGKST L ++T A+ AD F TL P + Y E +L D Sbjct: 357 VPTISVVGYTNAGKSTLLNTLTNAEVYTADQLFATLDPTTRRLPITYAETGESITVLLTD 416 Query: 213 IPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 G I + D F L+ L+H+V Q + ++ L+ + + Sbjct: 417 TVGFIHEL--PPPLVDSFRATLEEVTEADALIHLVDLSHPAWQNHIRSVMSILA--DMPV 472 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNE 295 +V ++ID VDSDTL + E Sbjct: 473 TPGPILVVFNKIDDVDSDTLVLAQEE 498 >gi|315434236|ref|NP_446141.2| nucleolar GTP-binding protein 1 [Rattus norvegicus] Length = 636 Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|302811273|ref|XP_002987326.1| hypothetical protein SELMODRAFT_158629 [Selaginella moellendorffii] gi|300144961|gb|EFJ11641.1| hypothetical protein SELMODRAFT_158629 [Selaginella moellendorffii] Length = 432 Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 35/56 (62%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + ++G PN GKS+ + ++ KP++ +YPFTT ++G + + + + D PG++ Sbjct: 245 LCLVGAPNVGKSSLVRVLSTGKPEVCNYPFTTRAISMGHIMDYAFSYQVTDTPGLL 300 >gi|294651533|ref|ZP_06728842.1| GTP-binding family protein [Acinetobacter haemolyticus ATCC 19194] gi|292822556|gb|EFF81450.1| GTP-binding family protein [Acinetobacter haemolyticus ATCC 19194] Length = 445 Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 5/111 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST + ++ AD F TL P L ++ +G +LAD G + Sbjct: 199 IPTISLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLADTVGFV 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSA 264 +N H L+ T +LLH+V + N+ A + +L E+ A Sbjct: 259 RNLQHDLVESFKATLEETLEATLLLHVVDSSSPNMPEQIEAVESVLKEIGA 309 >gi|262304215|gb|ACY44700.1| GTP-binding protein [Chthamalus fragilis] Length = 279 Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + L H+ A +++ V+ + D L Sbjct: 35 VTDIAGLVKGASEGQGLGNAFLSHIKACDALFHLCRAFDDDDVTHVEGEVNPVRD-LEII 93 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKK 293 N ELR K E L ID + TL K Sbjct: 94 NEELRLKDEAYLLPFIDKFEKTTLRSDK 121 >gi|164659940|ref|XP_001731094.1| hypothetical protein MGL_2093 [Malassezia globosa CBS 7966] gi|159104992|gb|EDP43880.1| hypothetical protein MGL_2093 [Malassezia globosa CBS 7966] Length = 570 Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 30/54 (55%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL VTRA + Y FTT +G + Y + + D PGI+ Sbjct: 37 ICGYPNVGKSSFLNKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVIDTPGIL 90 >gi|311747504|ref|ZP_07721289.1| ferrous iron transport protein B [Algoriphagus sp. PR1] gi|126574864|gb|EAZ79235.1| ferrous iron transport protein B [Algoriphagus sp. PR1] Length = 708 Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 77/178 (43%), Gaps = 19/178 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I IIG PN GKST +T KI +YP T+ +G + + + D+PG + Sbjct: 15 IAIIGNPNVGKSTIFNQLTGLNQKIGNYPGVTVDKKIGWMNFEGSTYEIVDLPGTYSLYP 74 Query: 220 AHQGAGIGDRFLKHTERT----HVLLHIVSA-LEENVQAAYQCILDELSAYNSELRKKIE 274 + I R L H ++ +VL+ I S L + A Q I +L ++ Sbjct: 75 NSEDEIIAHRVLNHIDKEKRPDYVLMVIDSCQLSRGLFLATQLI---------DLGIQLA 125 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITG-HGIPQILECLHDKIFSIRG 331 IV L+ D + L + E+ G VP + G G+ QI +HDK FSI Sbjct: 126 IV-LNMADLASKNNLEIRNYEIYKSLG-VPILSTDARGIKGLDQIKTLIHDKNFSIES 181 >gi|73949200|ref|XP_535203.2| PREDICTED: similar to Nucleolar GTP-binding protein 1 (Chronic renal failure gene protein) (GTP-binding protein NGB) [Canis familiaris] Length = 751 Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 290 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 346 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 347 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 378 >gi|94986105|ref|YP_605469.1| GTP-binding protein, HSR1-related [Deinococcus geothermalis DSM 11300] gi|94556386|gb|ABF46300.1| GTP-binding protein HflX [Deinococcus geothermalis DSM 11300] Length = 569 Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 27/181 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRA--KPK---IADYPFTTLYPNLGIVKEGYKE----FILAD 212 I I+G NAGKST L + T A +P+ + F TL P ++G+ E IL D Sbjct: 384 ISIVGYTNAGKSTLLNAFTHAAEEPRRVLAENKLFATLRPT---SRQGFLEGIGPVILTD 440 Query: 213 IPGIIKNAHQGAGIGDR-FLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSE 268 G I++ + R L+ VLLH+V A IL++L Sbjct: 441 TVGFIRDLPRDLARAFRATLEEIGDADVLLHVVDVASPGADLRLEAVNRILEDLG----- 495 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 R+ + L++ D D DTL R+ + +P S++ G+ + E L D + S Sbjct: 496 FRELPTVTALNKADAADPDTLERE----IERTNGIP--ISALRNLGLANLKEALADAVAS 549 Query: 329 I 329 + Sbjct: 550 V 550 >gi|300868233|ref|ZP_07112864.1| GTP-binding protein, HSR1-related [Oscillatoria sp. PCC 6506] gi|300333757|emb|CBN58048.1| GTP-binding protein, HSR1-related [Oscillatoria sp. PCC 6506] Length = 539 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 60/146 (41%), Gaps = 13/146 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL------GIVKEGYKEFILAD 212 + I I+G NAGKST L +T A+ AD F TL P V E +L D Sbjct: 365 VPSIAIVGYTNAGKSTLLNVLTNAEVYTADQLFATLDPTTRRLVIADAVTEESLSIVLTD 424 Query: 213 IPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 G I + D F L+ LLH+V + + ++ L+ + Sbjct: 425 TVGFIHEL--PPALIDAFRATLEEVTDADALLHVVDLSHPAWHSQIRSVMTILT--EMPV 480 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNE 295 +V ++ID VD DTL + + E Sbjct: 481 TPGPALVAFNKIDRVDGDTLRQAQEE 506 >gi|255938933|ref|XP_002560236.1| Pc15g00080 [Penicillium chrysogenum Wisconsin 54-1255] gi|211584858|emb|CAP82894.1| Pc15g00080 [Penicillium chrysogenum Wisconsin 54-1255] Length = 651 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL ++TRA + Y FTT +G Y F D PGI+ Sbjct: 170 ICGYPNVGKSSFLRNITRADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGIL 223 >gi|148379020|ref|YP_001253561.1| ferrous iron transport protein B [Clostridium botulinum A str. ATCC 3502] gi|153932220|ref|YP_001383402.1| ferrous iron transport protein B [Clostridium botulinum A str. ATCC 19397] gi|153936643|ref|YP_001386949.1| ferrous iron transport protein B [Clostridium botulinum A str. Hall] gi|148288504|emb|CAL82583.1| ferrous iron transport protein B [Clostridium botulinum A str. ATCC 3502] gi|152928264|gb|ABS33764.1| ferrous iron transport protein B [Clostridium botulinum A str. ATCC 19397] gi|152932557|gb|ABS38056.1| ferrous iron transport protein B [Clostridium botulinum A str. Hall] Length = 718 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I ++G PN GK+T +T + + ++P T+ G +K+ +K+ + D+PGI + Sbjct: 6 IALVGNPNCGKTTMFNYLTGSSQYVGNWPGVTVEKKEGKLKQ-HKDVKVIDLPGIYSLSP 64 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R TE+ V+++IV + LE N+ + Q + EL + I+ L Sbjct: 65 YTLEEVITRNYLITEKPEVIINIVDGTNLERNLYLSTQVM---------ELGIPV-IIAL 114 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V + K++L+ G E S++ G G ++++ Sbjct: 115 NMMDIVRKNGDIIDKDKLSKSMGCTVVETSALKGDGCKELID 156 >gi|126341116|ref|XP_001365359.1| PREDICTED: similar to G protein-binding protein CRFG [Monodelphis domestica] Length = 634 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYRYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDVSEQC 261 >gi|31560110|ref|NP_081276.2| nucleolar GTP-binding protein 1 [Mus musculus] gi|17368619|sp|Q99ME9|NOG1_MOUSE RecName: Full=Nucleolar GTP-binding protein 1; AltName: Full=Chronic renal failure gene protein; AltName: Full=GTP-binding protein NGB gi|13346459|gb|AAK19749.1|AF348208_1 GTP-binding protein NGB [Mus musculus] gi|19343845|gb|AAH25431.1| GTP binding protein 4 [Mus musculus] gi|148700336|gb|EDL32283.1| GTP binding protein 4, isoform CRA_b [Mus musculus] Length = 634 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|15639676|ref|NP_219126.1| GTP-binding protein EngA [Treponema pallidum subsp. pallidum str. Nichols] gi|189025914|ref|YP_001933686.1| GTP-binding protein EngA [Treponema pallidum subsp. pallidum SS14] gi|8134438|sp|P96128|DER_TREPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238689339|sp|B2S3S8|DER_TREPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|1732241|gb|AAB38705.1| GTP-binding protein [Treponema pallidum] gi|3322993|gb|AAC65658.1| GTP-binding protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018489|gb|ACD71107.1| GTP-binding protein [Treponema pallidum subsp. pallidum SS14] gi|291060055|gb|ADD72790.1| ribosome-associated GTPase EngA [Treponema pallidum subsp. pallidum str. Chicago] Length = 460 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 18/181 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + + I+G PN GKST + + R + D TT G V+ +FI+AD GI Sbjct: 197 VVRLAIVGKPNTGKSTLMNYLMRRTVSLVCDRAGTTRDVVTGHVEFKQYKFIIADTAGIR 256 Query: 218 KNAHQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 K I R + ++L+IV A + + I+ ++S N + Sbjct: 257 KRQKVYESIEYYSVIRAISILNAVDIVLYIVDA-RDGFSEQDKKIVSQISKRNLGV---- 311 Query: 274 EIVGLSQIDTVDSDT--LARKKNELATQCGQVPF----EFSSITGHGIPQILECLHDKIF 327 I L++ D ++ T +A+KK ++ T G++ F S+ TGHGI L C+ KIF Sbjct: 312 -IFLLNKWDLLEGSTSLIAKKKRDVRTAFGKMNFVPVVPVSAKTGHGISDALHCVC-KIF 369 Query: 328 S 328 + Sbjct: 370 A 370 >gi|310828251|ref|YP_003960608.1| GTP-binding protein [Eubacterium limosum KIST612] gi|308739985|gb|ADO37645.1| GTP-binding protein [Eubacterium limosum KIST612] Length = 603 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 1/101 (0%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII- 217 I + +IG N+GKST +T + I D F TL + V+ +++++D G I Sbjct: 378 IRTVSLIGYTNSGKSTLFNVLTESDAVIKDGLFITLDSTIRKVRPEAGDYLVSDTVGFIE 437 Query: 218 KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCI 258 K H+ LK E +LLH+V A N ++ + + Sbjct: 438 KLPHELIKAFKTTLKEVETADLLLHVVDASNPNYKSQIEVV 478 >gi|74267802|gb|AAI02585.1| GTPBP4 protein [Bos taurus] Length = 458 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|13529611|gb|AAH05514.1| Gtpbp4-pending protein [Mus musculus] Length = 633 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 172 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 228 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 229 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 260 >gi|219670281|ref|YP_002460716.1| GTP-binding protein Era [Desulfitobacterium hafniense DCB-2] gi|219540541|gb|ACL22280.1| GTP-binding protein Era [Desulfitobacterium hafniense DCB-2] Length = 303 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 8/132 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PNAGKST L + K I +D P TT I+ E + + D PGI K Sbjct: 15 VTVVGRPNAGKSTLLNQLLGQKILIMSDKPQTTRNKIHCILTEERGQVVFLDTPGIHKPK 74 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H+ G + D L+ ++L++V E A + IL+ L + I+ L+ Sbjct: 75 HKLGEFMVDSALESLREVDLILYMVDTTAE-FGAGEEYILENLKHVKTPC-----ILLLN 128 Query: 280 QIDTVDSDTLAR 291 +ID ++ D L + Sbjct: 129 KIDLIEKDKLLK 140 >gi|330960088|gb|EGH60348.1| GTP-binding protein HflX [Pseudomonas syringae pv. maculicola str. ES4326] Length = 433 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST S+T + AD F TL P L ++ + +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNSITDSDVFAADQLFATLDPTLRRLQLDDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ + + +LLH++ + E + + + ++ L +E Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDSHEPDRMSQIEQVMAVLGEIGAE 309 >gi|320590148|gb|EFX02591.1| nucleolar GTP-binding protein [Grosmannia clavigera kw1407] Length = 624 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + GLPN GKS+F+ SV+R + Y FTT G Y F + D PG++ Sbjct: 172 VFGLPNTGKSSFVRSVSRTDTPVDSYAFTTKSLFCGHFDFDYLRFQVIDTPGVV 225 >gi|320321883|gb|EFW77979.1| GTP-binding protein HflX [Pseudomonas syringae pv. glycinea str. B076] gi|320331012|gb|EFW86986.1| GTP-binding protein HflX [Pseudomonas syringae pv. glycinea str. race 4] gi|330872251|gb|EGH06400.1| GTP-binding protein HflX [Pseudomonas syringae pv. glycinea str. race 4] Length = 433 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST SVT + AD F TL P L ++ + +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNSVTDSDVFAADQLFATLDPTLRRLQLDDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ + + +LLH++ + E + + ++ L +E Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDSHEPERMSQIEQVMAVLGEIGAE 309 >gi|237794323|ref|YP_002861875.1| ferrous iron transport protein B [Clostridium botulinum Ba4 str. 657] gi|229262470|gb|ACQ53503.1| ferrous iron transport protein B [Clostridium botulinum Ba4 str. 657] Length = 718 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I ++G PN GK+T +T + + ++P T+ G +K+ +K+ + D+PGI + Sbjct: 6 IALVGNPNCGKTTMFNYLTGSSQYVGNWPGVTVEKKEGKLKQ-HKDVKVIDLPGIYSLSP 64 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R TE+ V+++IV + LE N+ + Q + EL + I+ L Sbjct: 65 YTLEEVITRNYLITEKPEVIINIVDGTNLERNLYLSTQVM---------ELGIPV-IIAL 114 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V + K++L+ G E S++ G G ++++ Sbjct: 115 NMMDIVRKNGDIIDKDKLSKSMGCAVVETSALKGDGCKELID 156 >gi|226953962|ref|ZP_03824426.1| GTP-binding protein [Acinetobacter sp. ATCC 27244] gi|226835316|gb|EEH67699.1| GTP-binding protein [Acinetobacter sp. ATCC 27244] Length = 445 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 5/111 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST + ++ AD F TL P L ++ +G +LAD G + Sbjct: 199 IPTISLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLADTVGFV 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSA 264 +N H L+ T +LLH+V + N+ A + +L E+ A Sbjct: 259 RNLQHDLVESFKATLEETLEATLLLHVVDSSSPNMPEQIEAVESVLKEIGA 309 >gi|194227234|ref|XP_001500993.2| PREDICTED: similar to GTP-binding protein NGB [Equus caballus] Length = 634 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|332262469|ref|XP_003280284.1| PREDICTED: nucleolar GTP-binding protein 1 isoform 1 [Nomascus leucogenys] Length = 634 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|262304213|gb|ACY44699.1| GTP-binding protein [Semibalanus balanoides] Length = 279 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + L H+ A +++ V+ + D L Sbjct: 35 VTDIAGLVKGASEGQGLGNAFLSHIKACDALFHLCRAFDDDDVTHVEGEVNPVRD-LDII 93 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKK 293 N ELR K E L ID + TL K Sbjct: 94 NEELRLKDESYLLPYIDKFEKTTLRSDK 121 >gi|262067524|ref|ZP_06027136.1| GTP-binding protein Era [Fusobacterium periodonticum ATCC 33693] gi|291378787|gb|EFE86305.1| GTP-binding protein Era [Fusobacterium periodonticum ATCC 33693] Length = 297 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 11/166 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I I+G PN GKST + + K I T N+ GI+ ++I D PGI K Sbjct: 6 IAIVGRPNVGKSTLINKLVAEKVAIVSDKAGTTRDNIKGILNVKDNQYIFIDTPGIHKPQ 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H G + + + + ++L +V A +++ ++D + +++ R I+ ++ Sbjct: 66 HLLGEYMTNIAVNILKDVDIILFLVDA-SKSIGTGDIFVMDRIKENSNKPR----ILLVN 120 Query: 280 QIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECL 322 ++D + + A K E+ + G ++ F S++ GI Q+LE L Sbjct: 121 KVDLISDEQKAEKLKEIEEKLGKFDKIIFA-SAMYSFGIAQLLEAL 165 >gi|288940956|ref|YP_003443196.1| GTP-binding proten HflX [Allochromatium vinosum DSM 180] gi|288896328|gb|ADC62164.1| GTP-binding proten HflX [Allochromatium vinosum DSM 180] Length = 443 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 17/168 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFILADIPGIIK 218 + ++G NAGKST +T A AD F TL P L + G+ +LAD G + Sbjct: 224 VSLVGYTNAGKSTLFNGLTEAGVLEADQLFATLDPTLRRLDLPSGGH--VLLADTVGFVS 281 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSALEEN---VQAAYQCILDELSAYNSELRKKIE 274 H+ L+ T +LLH++ A N + A + +L E+ ++ R ++E Sbjct: 282 RLPHELVAAFRSTLEETRGASLLLHVIDAAAANRPRLMADVETVLAEIGSHE---RPRLE 338 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + ++ID ++ +T + E + V S+ TG G+ + + L Sbjct: 339 V--FNKIDRLEGET---ARLERDAEGRPVRVWVSARTGEGLDLLRQAL 381 >gi|330813692|ref|YP_004357931.1| GTP-binding and nucleic acid-binding protein YchF [Candidatus Pelagibacter sp. IMCC9063] gi|327486787|gb|AEA81192.1| GTP-binding and nucleic acid-binding protein YchF [Candidatus Pelagibacter sp. IMCC9063] Length = 341 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 18/91 (19%) Query: 178 SVTRAK-PKIADYPFTTLYPNLGIV----------------KEGYKEFI-LADIPGIIKN 219 ++T++K + A++PF T+ PN+G+V K+ I DI G++ Sbjct: 4 ALTKSKNAEAANFPFCTIEPNVGVVSVPDERIEKISKIAISKKTIPTLITFVDIAGLVAG 63 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 A +G G+G++FL H ++H++ E + Sbjct: 64 ASKGEGLGNKFLSHIREVDAIVHLLRCFESD 94 >gi|157874309|ref|XP_001685638.1| hypothetical protein [Leishmania major strain Friedlin] gi|68128710|emb|CAJ08843.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 962 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 5/43 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRA-----KPKIADYPFTTLYPNLG 199 IG+IG P+AGKSTF +VT ++A +PFTT+ PN+G Sbjct: 466 IGLIGKPSAGKSTFFNAVTNPAVESDAARVAAFPFTTIEPNIG 508 >gi|146277534|ref|YP_001167693.1| GTP-binding protein, HSR1-related [Rhodobacter sphaeroides ATCC 17025] gi|145555775|gb|ABP70388.1| GTP-binding protein, HSR1-related [Rhodobacter sphaeroides ATCC 17025] Length = 448 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 11/166 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P + G+ ++ IL+D G I + Sbjct: 230 VALVGYTNAGKSTLFNRMTGAEVLAKDMLFATLDPTMRGVTLPSGRKVILSDTVGFISDL 289 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 Q L+ ++LH+ ++ E QAA IL L + + ++ Sbjct: 290 PTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQAADVAEILQSLGVKGATPQYEV--- 346 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 +++D V+ A ++ Q + F S++TG G+P++LE + Sbjct: 347 -WNKLDLVEGS--AHEQLVAQAQRSETVFALSALTGEGLPELLEAV 389 >gi|3153873|gb|AAC24364.1| putative G-binding protein [Homo sapiens] Length = 562 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 157 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 213 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 214 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 245 >gi|195475024|ref|XP_002089786.1| GE22324 [Drosophila yakuba] gi|194175887|gb|EDW89498.1| GE22324 [Drosophila yakuba] Length = 652 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 39/184 (21%), Positives = 85/184 (46%), Gaps = 15/184 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ + Sbjct: 171 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + +R + + L H+ + + + + QC + +++ + S K I Sbjct: 230 ----LEERNVIEMQAITALAHLRACVLYFMDISEQCGHSLEEQVKLFESIKPLFTNKPLI 285 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQ---VPFEF-SSITGHGIPQILECLHDKIFSIRG 331 + +++ID + + L ++ + T+ + +P S++ G+ ++ +++ S R Sbjct: 286 LAINKIDILTPEDLPEERRAIITKLQEDKNIPVMLMSTVQETGVMEVKTEACERLLSYRV 345 Query: 332 ENEF 335 + + Sbjct: 346 DQKM 349 >gi|195332801|ref|XP_002033082.1| GM20605 [Drosophila sechellia] gi|194125052|gb|EDW47095.1| GM20605 [Drosophila sechellia] Length = 652 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 39/184 (21%), Positives = 85/184 (46%), Gaps = 15/184 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ + Sbjct: 171 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + +R + + L H+ + + + + QC + +++ + S K I Sbjct: 230 ----LEERNVIEMQAITALAHLRACVLYFMDISEQCGHSLEEQVKLFESIKPLFTNKPLI 285 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQ---VPFEF-SSITGHGIPQILECLHDKIFSIRG 331 + +++ID + + L ++ + T+ + +P S++ G+ ++ +++ S R Sbjct: 286 LAINKIDILTPEDLPEERRAIITKLQEDKNIPVMLMSTVQETGVMEVKTEACERLLSYRV 345 Query: 332 ENEF 335 + + Sbjct: 346 DQKM 349 >gi|83593020|ref|YP_426772.1| small GTP-binding protein domain-containing protein [Rhodospirillum rubrum ATCC 11170] gi|83575934|gb|ABC22485.1| Small GTP-binding protein domain [Rhodospirillum rubrum ATCC 11170] Length = 418 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 15/177 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 + ++G N+GKST +T D F TL P + + ++ IL+D G + + Sbjct: 194 VALVGYTNSGKSTLFNRLTAGGVLAKDMLFATLDPTMRSLDLPSGRKVILSDTVGFVSDL 253 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIE-- 274 H+ L+ + V++H+ ++ ++ + Q A + +L E+ EL +++E Sbjct: 254 PHELVAAFRATLEEVKAADVIVHVRDIAGIDSDAQKADVEVVLREM-----ELDERVESG 308 Query: 275 -IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 I L++ID +DS+ A+ + A + VP S++TG G +L + ++ R Sbjct: 309 LIEALNKIDLLDSERQAQLVEDTAGRDTLVP--VSAVTGAGTDALLARIDARLAESR 363 >gi|257482409|ref|ZP_05636450.1| GTP-binding protein HflX [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 433 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST SVT + AD F TL P L ++ + +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNSVTDSDVFAADQLFATLDPTLRRLQLDDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ + + +LLH++ + E + + ++ L +E Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDSHEPERMSQIEQVMAVLGEIGAE 309 >gi|169338118|ref|ZP_02863221.1| ferrous iron transport protein B [Clostridium botulinum C str. Eklund] gi|169294081|gb|EDS76214.1| ferrous iron transport protein B [Clostridium botulinum C str. Eklund] Length = 312 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 17/167 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 ++ I +IG PN GKST ++T +K I ++P T+ G VK + + + D+PG Sbjct: 1 MSTIALIGNPNCGKSTLFNAITGSKQHIGNWPGVTVEKKEGKVKVDNEVYTIIDLPGTYS 60 Query: 219 ---NAHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKI 273 + D LK E+ V++++V A +E N+ Q + E+ A Sbjct: 61 LGAYSEDERVARDYILK--EKPDVVVNVVDASNIERNLYLTTQLL--EMGAN-------- 108 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ L+ +D +S + N L+ + ++ G+ ++L+ Sbjct: 109 VVIALNMMDEAESKNIKINVNTLSKELNVPVISTVAVKKRGVQELLK 155 >gi|217977174|ref|YP_002361321.1| GTP-binding protein Era [Methylocella silvestris BL2] gi|217502550|gb|ACK49959.1| GTP-binding protein Era [Methylocella silvestris BL2] Length = 310 Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 35/170 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGI---- 216 + +IG PNAGKST + + AK I T + GI EG + I D PGI Sbjct: 21 VALIGAPNAGKSTLINQLVGAKVSIVSRKAQTTRAQVRGIAIEGDAQIIFVDTPGIFAPR 80 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 + +A GAG D +L+ L+E+V+A + D +A Sbjct: 81 RRLDRAMVTSAWGGAGDAD-------AVALLVDARKGLDEDVEAILARLADVRAA----- 128 Query: 270 RKKIEIVGLSQIDTVDS----DTLARKKNELATQCGQVPFEFSSITGHGI 315 +I+ +++IDTV+ D A+ + LA F S++ G+G+ Sbjct: 129 ----KILVINKIDTVEPPKLLDIAAQFNDRLAFDHT---FMISALRGYGV 171 >gi|254168276|ref|ZP_04875122.1| GTPase, putative [Aciduliprofundum boonei T469] gi|197622785|gb|EDY35354.1| GTPase, putative [Aciduliprofundum boonei T469] Length = 317 Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 4/76 (5%) Query: 146 LGQEKIIWLKLKLI----ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV 201 LGQ + I KL I + + I G PN GKS +A ++ AKP+IA YPFTT +G + Sbjct: 145 LGQVRDIIRKLPDINPELSTVVIAGYPNVGKSELVAKMSTAKPEIASYPFTTKGIVVGHM 204 Query: 202 KEGYKEFILADIPGII 217 + + + D PG++ Sbjct: 205 EIKGRRVQIVDTPGLL 220 >gi|168182882|ref|ZP_02617546.1| ferrous iron transport protein B [Clostridium botulinum Bf] gi|182673908|gb|EDT85869.1| ferrous iron transport protein B [Clostridium botulinum Bf] Length = 718 Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I ++G PN GK+T +T + + ++P T+ G +K+ +K+ + D+PGI + Sbjct: 6 IALVGNPNCGKTTMFNYLTGSSQYVGNWPGVTVEKKEGKLKQ-HKDVKVIDLPGIYSLSP 64 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R TE+ V+++IV + LE N+ + Q + EL + I+ L Sbjct: 65 YTLEEVITRNYLITEKPEVIINIVDGTNLERNLYLSTQVM---------ELGIPV-IIAL 114 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V + K++L+ G E S++ G G ++++ Sbjct: 115 NMMDIVRKNGDIIDKDKLSKSMGCAVVETSALKGDGCKELID 156 >gi|67970676|dbj|BAE01680.1| unnamed protein product [Macaca fascicularis] Length = 604 Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|74216616|dbj|BAE37742.1| unnamed protein product [Mus musculus] Length = 445 Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|258570279|ref|XP_002543943.1| GTP-binding protein YchF [Uncinocarpus reesii 1704] gi|237904213|gb|EEP78614.1| GTP-binding protein YchF [Uncinocarpus reesii 1704] Length = 381 Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 24/135 (17%) Query: 165 IGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIV----------KEGYK------- 206 +GL N GKST ++T+ A++P+ T+ P V E YK Sbjct: 13 VGLANVGKSTLFQAITKCSLGNPANFPYATIDPEEARVIVPDARYDWLCEHYKPKSQVPA 72 Query: 207 EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDEL 262 + DI G+ + A GAG+G+ FL H + +V ++ +V+ + D L Sbjct: 73 NLTVYDIAGLTRGASTGAGLGNAFLSHIRAVDAIFQVVRCFDDAEIIHVEGDVDPVRD-L 131 Query: 263 SAYNSELR-KKIEIV 276 + ELR K IE V Sbjct: 132 EIISEELRIKDIEFV 146 >gi|169343840|ref|ZP_02864837.1| ferrous iron transport protein B [Clostridium perfringens C str. JGS1495] gi|169297960|gb|EDS80051.1| ferrous iron transport protein B [Clostridium perfringens C str. JGS1495] Length = 669 Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 14/168 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK++ +T+++ I ++P T+ G +K + + + D+PG A Sbjct: 4 IALAGNPNCGKTSLFNLLTKSRQHIGNWPGVTVEKKEGTLKFKGESYKVIDLPGTYSLGA 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + I R ++ V++++V A LE N+ Q I E+ + ++ L Sbjct: 64 YSEDEIVARNYILKDKPDVVINVVDATNLERNLYLTTQLI---------EMGANV-VIAL 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC-LHDK 325 + ID +S + N+L+ + G + S++ GI +++E +H K Sbjct: 114 NMIDQAESLNIEIDTNKLSKRLGVPIIKTSALKNRGIEELIETSIHSK 161 >gi|168178446|ref|ZP_02613110.1| ferrous iron transport protein B [Clostridium botulinum NCTC 2916] gi|182671489|gb|EDT83463.1| ferrous iron transport protein B [Clostridium botulinum NCTC 2916] Length = 718 Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I ++G PN GK+T +T + + ++P T+ G +K+ +K+ + D+PGI + Sbjct: 6 IALVGNPNCGKTTMFNYLTGSSQYVGNWPGVTVEKKEGKLKQ-HKDVKVIDLPGIYSLSP 64 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R TE+ V+++IV + LE N+ + Q + EL + I+ L Sbjct: 65 YTLEEVITRNYLITEKPEVIINIVDGTNLERNLYLSTQVM---------ELGIPV-IIAL 114 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V + K++L+ G E S++ G G ++++ Sbjct: 115 NMMDIVRKNGDIIDKDKLSKSMGCAVVETSALKGDGCKELID 156 >gi|158520022|ref|YP_001527892.1| GTP-binding protein HSR1-related [Desulfococcus oleovorans Hxd3] gi|158508848|gb|ABW65815.1| GTP-binding protein HSR1-related [Desulfococcus oleovorans Hxd3] Length = 565 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 2/99 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 I I+G NAGKST L +++++ AD F TL P ++ + IL D G I+N Sbjct: 388 ISILGYTNAGKSTLLNTLSKSGVATADRLFMTLDPASRRIRFPREMDVILTDTVGFIQNL 447 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCI 258 + + R L+ ER + +H+V A +A + + Sbjct: 448 PKELMVAFRATLEELERADLFIHVVDAANPAAEAQIRSV 486 >gi|152996644|ref|YP_001341479.1| HSR1-like GTP-binding protein [Marinomonas sp. MWYL1] gi|150837568|gb|ABR71544.1| GTP-binding protein HSR1-related [Marinomonas sp. MWYL1] Length = 429 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 7/112 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST T A AD F TL P L + E +LAD G I Sbjct: 198 VPTVSLVGYTNAGKSTLFNRATGADVYAADQLFATLDPTLRRLDIEQIGSIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSAL----EENVQAAYQCILDELSA 264 + H+ LK + +LLHIV A +EN++ +L+E+ A Sbjct: 258 RQLPHRLIKAFQATLKESSEADLLLHIVDAADISRDENMKHV-DSVLEEIGA 308 >gi|114566699|ref|YP_753853.1| hypothetical protein Swol_1173 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337634|gb|ABI68482.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 354 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 44/167 (26%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-----------------ADYPFTTLYPNLGIVKEG 204 +GIIG+P+ GK+T +T ++ ++ DY P K Sbjct: 3 LGIIGMPSVGKTTVFELLTESRDRVHSVGKTNVAMARIPDERIDYLSQLYKPK----KTS 58 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 Y + + DIPG+I A + A + FL + LLH+V E++ E+ + Sbjct: 59 YAQLEVVDIPGLIPGAEKAAVL---FLDSVRKADALLHVVRVFEDS----------EVPS 105 Query: 265 YNSELR--KKIEIVG----LSQIDTVDSDTLA----RKKNELATQCG 301 +N+E+ K IE + L+ +D ++ +KKN++ + Sbjct: 106 FNNEINPVKDIETINYELLLADLDLIEKRMERINNNKKKNQMLKELS 152 >gi|296220860|ref|XP_002756516.1| PREDICTED: nucleolar GTP-binding protein 1-like [Callithrix jacchus] Length = 636 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|282861802|ref|ZP_06270866.1| GTP-binding protein Era [Streptomyces sp. ACTE] gi|282563618|gb|EFB69156.1| GTP-binding protein Era [Streptomyces sp. ACTE] Length = 321 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 11/151 (7%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ +K I ++ P TT + GIV + IL D PG+ K Sbjct: 28 VGRPNAGKSTLTNALVGSKVAITSNRPQTTRHTVRGIVHRSDAQLILVDTPGLHK---PR 84 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ ++ + + I+ EL+ +RK +I +++ Sbjct: 85 TLLGERLNDVVRTTWAEVDVIGFCLPADQKLGPGDKFIVKELAG----IRKTPKIAIITK 140 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEFSSIT 311 D VDS TLA + ++ ++ FE++ I Sbjct: 141 TDLVDSKTLAEQLLAVSRLGEELGFEWAQIV 171 >gi|325180497|emb|CCA14903.1| predicted protein putative [Albugo laibachii Nc14] Length = 659 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 13/97 (13%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+F+ ++RA+ + Y FTT +G Y + + D PGI+ ++ + Sbjct: 173 ITGFPNVGKSSFMNKISRAQVDVQPYAFTTKALYVGHFDYKYLRWQVIDTPGILDHSLE- 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD 260 ER + + V+AL ++QA+ LD Sbjct: 232 -----------ERNTIEMQAVTAL-AHLQASILFFLD 256 >gi|218883329|ref|YP_002427711.1| GTP-binding protein [Desulfurococcus kamchatkensis 1221n] gi|218764945|gb|ACL10344.1| GTP-binding protein [Desulfurococcus kamchatkensis 1221n] Length = 370 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 35/59 (59%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKS + +T A+ IADYP++T YP G++K L D P + +++ Sbjct: 68 VVVVGPPNTGKSMLVNRLTGARTIIADYPYSTTYPVPGMLKYRDIYIQLIDTPPLSRDS 126 >gi|195581872|ref|XP_002080754.1| GD10078 [Drosophila simulans] gi|194192763|gb|EDX06339.1| GD10078 [Drosophila simulans] Length = 652 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 39/184 (21%), Positives = 85/184 (46%), Gaps = 15/184 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ + Sbjct: 171 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + +R + + L H+ + + + + QC + +++ + S K I Sbjct: 230 ----LEERNVIEMQAITALAHLRACVLYFMDISEQCGHSLEEQVKLFESIKPLFTNKPLI 285 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQ---VPFEF-SSITGHGIPQILECLHDKIFSIRG 331 + +++ID + + L ++ + T+ + +P S++ G+ ++ +++ S R Sbjct: 286 LAINKIDILTPEDLPEERRAIITKLQEDKNIPVMLMSTVQETGVMEVKTEACERLLSYRV 345 Query: 332 ENEF 335 + + Sbjct: 346 DQKM 349 >gi|67967876|dbj|BAE00420.1| unnamed protein product [Macaca fascicularis] Length = 634 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|322501975|emb|CBZ37059.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 959 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 5/43 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRA-----KPKIADYPFTTLYPNLG 199 IG+IG P+AGKSTF +VT ++A +PFTT+ PN+G Sbjct: 463 IGLIGKPSAGKSTFFNAVTNPAVESDAARVAAFPFTTIEPNIG 505 >gi|297746325|emb|CBI16381.3| unnamed protein product [Vitis vinifera] Length = 354 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA + Y FTT +G Y + + D PGI+ Sbjct: 124 ILICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPF 183 Query: 222 QGAGI 226 + I Sbjct: 184 EDRNI 188 >gi|167646573|ref|YP_001684236.1| GTP-binding proten HflX [Caulobacter sp. K31] gi|167349003|gb|ABZ71738.1| GTP-binding proten HflX [Caulobacter sp. K31] Length = 446 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 12/165 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + ++G NAGKST +T A D F TL P L VK + IL+D G I + Sbjct: 216 VALVGYTNAGKSTLFNRLTHATVVAQDMLFATLDPTLRNVKLPDGRPAILSDTVGFISDL 275 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 H+ L+ + V+LH+ V+ + + QA Q +L EL + + IE+ Sbjct: 276 PHELVEAFRATLEEVQEADVVLHVRDVANPDTDAQARDVQVVLAELKVTAEDGKTIIEV- 334 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQV-PFEFSSITGHGIPQILE 320 ++ID VD + + L Q ++ S++TG G ++L+ Sbjct: 335 -WNKIDLVDGEA----REILDGQARRLGASAVSAVTGEGCAELLK 374 >gi|28872055|ref|NP_794674.1| GTP-binding protein HflX [Pseudomonas syringae pv. tomato str. DC3000] gi|213967925|ref|ZP_03396071.1| GTP-binding protein HflX [Pseudomonas syringae pv. tomato T1] gi|301384445|ref|ZP_07232863.1| GTP-binding protein HflX [Pseudomonas syringae pv. tomato Max13] gi|302064112|ref|ZP_07255653.1| GTP-binding protein HflX [Pseudomonas syringae pv. tomato K40] gi|302132267|ref|ZP_07258257.1| GTP-binding protein HflX [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28855308|gb|AAO58369.1| GTP-binding protein HflX [Pseudomonas syringae pv. tomato str. DC3000] gi|213927268|gb|EEB60817.1| GTP-binding protein HflX [Pseudomonas syringae pv. tomato T1] gi|330873784|gb|EGH07933.1| GTP-binding protein HflX [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 433 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST SVT + AD F TL P L ++ +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNSVTDSDVFAADQLFATLDPTLRRLQLNDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ + + +LLH++ + E + + + ++ L +E Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDSHEPDRMSQIEQVMAVLGEIGAE 309 >gi|19921908|ref|NP_610484.1| CG8801 [Drosophila melanogaster] gi|17369753|sp|Q9V411|NOG1_DROME RecName: Full=Probable nucleolar GTP-binding protein 1 gi|5901862|gb|AAD55439.1|AF181654_1 BcDNA.LD23830 [Drosophila melanogaster] gi|7303900|gb|AAF58945.1| CG8801 [Drosophila melanogaster] Length = 652 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 39/184 (21%), Positives = 85/184 (46%), Gaps = 15/184 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA ++ Y FTT +G Y + + D PGI+ + Sbjct: 171 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + +R + + L H+ + + + + QC + +++ + S K I Sbjct: 230 ----LEERNVIEMQAITALAHLRACVLYFMDISEQCGHSLEEQVKLFESIKPLFTNKPLI 285 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQ---VPFEF-SSITGHGIPQILECLHDKIFSIRG 331 + +++ID + + L ++ + T+ + +P S++ G+ ++ +++ S R Sbjct: 286 LAINKIDILTPEDLPEERRAIITKLQEDKNIPVMLMSTVQETGVMEVKTEACERLLSYRV 345 Query: 332 ENEF 335 + + Sbjct: 346 DQKM 349 >gi|298206898|ref|YP_003715077.1| putative GTP-binding protein [Croceibacter atlanticus HTCC2559] gi|83849532|gb|EAP87400.1| putative GTP-binding protein [Croceibacter atlanticus HTCC2559] Length = 294 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 20/166 (12%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + A V I TT + LGIV + +L+D PGIIK A Sbjct: 8 VNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGEDFQIVLSDTPGIIKPA 67 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENV--QAAYQCILDELSAYNSELRKKIEIVG 277 +Q F+K E VL+++V E+++ +A ++ I N+E+ ++ Sbjct: 68 YQLQENMMDFVKSAFEDADVLIYMVEIGEQSLKDEAFFKKIT------NAEIPV---LLL 118 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVP----FEFSSITGHGIPQIL 319 L++IDT D L + ++ +VP + S++ G + ++L Sbjct: 119 LNKIDTSDQHQL---EEQMQYWKEKVPTAEIYPISALEGFNVSEVL 161 >gi|295130581|ref|YP_003581244.1| GTP-binding protein HflX [Propionibacterium acnes SK137] gi|291375198|gb|ADD99052.1| GTP-binding protein HflX [Propionibacterium acnes SK137] gi|313772150|gb|EFS38116.1| GTP-binding protein HflX [Propionibacterium acnes HL074PA1] gi|313792154|gb|EFS40255.1| GTP-binding protein HflX [Propionibacterium acnes HL110PA1] gi|313810014|gb|EFS47735.1| GTP-binding protein HflX [Propionibacterium acnes HL083PA1] gi|313830342|gb|EFS68056.1| GTP-binding protein HflX [Propionibacterium acnes HL007PA1] gi|313833716|gb|EFS71430.1| GTP-binding protein HflX [Propionibacterium acnes HL056PA1] gi|313838719|gb|EFS76433.1| GTP-binding protein HflX [Propionibacterium acnes HL086PA1] gi|314973347|gb|EFT17443.1| GTP-binding protein HflX [Propionibacterium acnes HL053PA1] gi|314976024|gb|EFT20119.1| GTP-binding protein HflX [Propionibacterium acnes HL045PA1] gi|314983954|gb|EFT28046.1| GTP-binding protein HflX [Propionibacterium acnes HL005PA1] gi|315078029|gb|EFT50080.1| GTP-binding protein HflX [Propionibacterium acnes HL053PA2] gi|315080654|gb|EFT52630.1| GTP-binding protein HflX [Propionibacterium acnes HL078PA1] gi|315096262|gb|EFT68238.1| GTP-binding protein HflX [Propionibacterium acnes HL038PA1] gi|327326174|gb|EGE67964.1| GTP-binding protein HflX [Propionibacterium acnes HL096PA2] gi|327445938|gb|EGE92592.1| GTP-binding protein HflX [Propionibacterium acnes HL043PA2] gi|327448083|gb|EGE94737.1| GTP-binding protein HflX [Propionibacterium acnes HL043PA1] gi|327453128|gb|EGE99782.1| GTP-binding protein HflX [Propionibacterium acnes HL092PA1] gi|328760604|gb|EGF74171.1| GTP-binding protein HflX [Propionibacterium acnes HL099PA1] Length = 493 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 11/167 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I+G NAGKS+ L +TRA + + F TL P +G + + L D G Sbjct: 272 VPSVAIVGYTNAGKSSLLNRLTRAGVLVENALFATLDPTTRRATTSDG-RVYTLTDTVGF 330 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 +++ H L+ T VLLH+V A + + + LS + EI Sbjct: 331 VRHLPHDLVEAFASTLEETAMADVLLHVVDADDPDPLGQVDAVRGVLSGIGAS--NIPEI 388 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + L++ID + +T+ ++ + S+ TG GI +++E + Sbjct: 389 LVLNKIDRLSDETILTLRSTFPG-----AYLVSAHTGEGIDKLVEAI 430 >gi|227548795|ref|ZP_03978844.1| GTP-binding protein Era [Corynebacterium lipophiloflavum DSM 44291] gi|227079125|gb|EEI17088.1| GTP-binding protein Era [Corynebacterium lipophiloflavum DSM 44291] Length = 307 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 29/157 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-- 218 + +G PN GKST ++ K I AD P TT +P GI+ + I+ D PG+ + Sbjct: 17 VSFVGRPNTGKSTLTNALVGEKIAIMADQPETTRHPIRGIINREDAQVIVVDTPGVHRPR 76 Query: 219 -------------------------NAHQGAGIGDRF-LKHTERTHVLLHIVSALEENVQ 252 A + G GDRF L+ +T IV + + + Sbjct: 77 TLLGERLNDVVRDTFADVDVIGFTVPADEKIGPGDRFILEQIRKTKPNAPIVGIVTKLDK 136 Query: 253 AAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 A+ + + L + L + E+V +S I+ V D L Sbjct: 137 ASKDTVGERLVELHELLGEDCEVVPVSAIEAVQLDVL 173 >gi|331009765|gb|EGH89821.1| GTP-binding protein HflX [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 433 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST SVT + AD F TL P L ++ + +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNSVTDSDVFAADQLFATLDPTLRRLQLDDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ + + +LLH++ + E + + ++ L +E Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDSHEPERMSQIEQVMAVLGEIGAE 309 >gi|146097008|ref|XP_001468005.1| hypothetical protein [Leishmania infantum JPCM5] gi|134072371|emb|CAM71079.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 959 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 5/43 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRA-----KPKIADYPFTTLYPNLG 199 IG+IG P+AGKSTF +VT ++A +PFTT+ PN+G Sbjct: 463 IGLIGKPSAGKSTFFNAVTNPAVESDAARVAAFPFTTIEPNIG 505 >gi|332654437|ref|ZP_08420180.1| ferrous iron transport protein B [Ruminococcaceae bacterium D16] gi|332516401|gb|EGJ46007.1| ferrous iron transport protein B [Ruminococcaceae bacterium D16] Length = 810 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 13/168 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 + + G PN GK+T ++T + + ++P T+ GI G +E + D+PGI + Sbjct: 139 VALAGNPNCGKTTLFNALTGSNQYVGNWPGVTVEKKEGIAHLGDRELTVVDLPGIYSLSP 198 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + I R E ++ IV A LE N+ Q + EL + + ++ L Sbjct: 199 YSMEEIVARDFIIGEGPDAIIDIVDATNLERNLYLTVQLL---------ELERPM-VLAL 248 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + +D V + L+ + G ++ TG G+ ++LE H ++ Sbjct: 249 NFMDEVHAHGDKIDIERLSRELGVPVVPITARTGEGLDELLEVAHRQM 296 >gi|289677942|ref|ZP_06498832.1| GTP-binding protein EngA [Pseudomonas syringae pv. syringae FF5] Length = 391 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 11/166 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR + I D T G K + +IL D GI Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60 Query: 217 IKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + H + ++ L E V+L +V A +A Y D++ + R K Sbjct: 61 SGDEHGMDEKMAEQSLLAIEEADVVLFLVDA-----RAGYTA-ADQMIGEHLRKRNKRSY 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 V ++ID +D + LAR + +P + G GI Q+LE Sbjct: 115 VVANKIDNID-ENLARAEFSPMGLGDAIP--VAGAHGRGISQMLEI 157 >gi|254491993|ref|ZP_05105171.1| GTP-binding proten HflX [Methylophaga thiooxidans DMS010] gi|224462808|gb|EEF79079.1| GTP-binding proten HflX [Methylophaga thiooxydans DMS010] Length = 380 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 4/126 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G N GKST VT A+ D F TL P L VK E ILAD G I++ Sbjct: 209 VSLVGYTNMGKSTLFNKVTSAEVYADDRLFATLDPTLRRVKLHDTEMLILADTVGFIRDL 268 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H L+ T +LLH+V + + + D L E + +++ + Sbjct: 269 PHDLVESFSSTLEETRDAALLLHVVDCASGDREELIHHVNDVLKQI--EAHELPQLIIYN 326 Query: 280 QIDTVD 285 +ID VD Sbjct: 327 KIDNVD 332 >gi|169831711|ref|YP_001717693.1| TGS domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169638555|gb|ACA60061.1| TGS domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 311 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 4/55 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI--LADIP 214 + + G PN GKS +++++RA+ K+A+YPFTT P G++ ++E + L D P Sbjct: 82 VVLTGYPNTGKSAIVSALSRARVKVAEYPFTTTVPFAGMMP--FEEIMIQLVDTP 134 >gi|83311358|ref|YP_421622.1| GTP-binding protein Era [Magnetospirillum magneticum AMB-1] gi|82946199|dbj|BAE51063.1| GTPase [Magnetospirillum magneticum AMB-1] Length = 303 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 11/165 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGII--K 218 + ++G PNAGKST + ++ K I TT + +GI G + +L D PGI K Sbjct: 14 VAVVGAPNAGKSTLVNALVGTKVSIVSPKVQTTRFRVMGIAMVGEAQVVLVDTPGIFAPK 73 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + A + + + H+ L I +A + + I+D+L K+ I+ L Sbjct: 74 KRLERAMVAAAWGGTNDADHICLLIDAA--KGYDDESRAIVDKLKET-----KRQAILVL 126 Query: 279 SQIDTVDSDTLARKKNEL-ATQCGQVPFEFSSITGHGIPQILECL 322 +++D V D L +L A F S++ G GI +L L Sbjct: 127 NKVDLVKRDKLLGLTAQLDAEGIFTDVFMISALKGDGIADLLAHL 171 >gi|319898693|ref|YP_004158786.1| GTP-binding protein Era [Bartonella clarridgeiae 73] gi|319402657|emb|CBI76203.1| GTP-binding protein Era [Bartonella clarridgeiae 73] Length = 300 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 19/169 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI---- 216 + +IG+PNAGKST + + K I + TT GIV + IL D PG+ Sbjct: 12 VAVIGVPNAGKSTLVNQLVGTKISIVTHKVQTTRTLVRGIVIYDKTQIILIDTPGVFRPH 71 Query: 217 --IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 ++ A A G K+ + VL+ + S L + V A +LD L + + + Sbjct: 72 KRLERAMVSAAWGGA--KNADILLVLIDVQSGLSDEVDA----MLDILKSVEQD-----K 120 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQV-PFEFSSITGHGIPQILECL 322 I+ L++IDTV +L ++ + + F S++ G G +L L Sbjct: 121 ILVLNKIDTVAKSSLLALTAKVNERVNFLQTFMISALNGSGCKDLLYYL 169 >gi|146281616|ref|YP_001171769.1| GTP-binding protein Era [Pseudomonas stutzeri A1501] gi|145569821|gb|ABP78927.1| GTP-binding protein Era [Pseudomonas stutzeri A1501] Length = 305 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + + D PG+ KN Sbjct: 19 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGSVQAVYVDTPGLHKN- 77 Query: 221 HQGAGIGDRFLKHT 234 G +R++ T Sbjct: 78 --GETALNRYMNRT 89 >gi|268574482|ref|XP_002642218.1| Hypothetical protein CBG18192 [Caenorhabditis briggsae] Length = 154 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 4/64 (6%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAY 265 +AD+PGII+ A Q G G +FLKH E V++ I+ + L+ ++ ++ L+ +S Sbjct: 6 VADLPGIIEGASQNRGKGYKFLKHLEYADVIVMIIDSQGFQLKNDLDCPFRTPLESVSLL 65 Query: 266 NSEL 269 N EL Sbjct: 66 NKEL 69 >gi|322494410|emb|CBZ29712.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 962 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 5/43 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-----PKIADYPFTTLYPNLG 199 IG+IG P+AGKSTF +VT ++A +PFTT+ PN+G Sbjct: 466 IGLIGKPSAGKSTFFNAVTNPTVESEAARVAAFPFTTIEPNIG 508 >gi|297171055|gb|ADI22068.1| predicted GTPase [uncultured myxobacterium HF0200_08J13] Length = 329 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG PNAGK+ LA ++ A P++A YPFTT P ++ L D P + +AH Sbjct: 83 VVVIGGPNAGKTRVLAELSNAAPEVAPYPFTTREPFPAMMPVNDVLIQLIDTPPVT-DAH 141 >gi|239827759|ref|YP_002950383.1| GTP-binding protein Era [Geobacillus sp. WCH70] gi|239808052|gb|ACS25117.1| GTP-binding protein Era [Geobacillus sp. WCH70] Length = 302 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 14/133 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D P TT G+ + I D PG+ K Sbjct: 11 VSIVGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTDDAQIIFIDTPGMHKPK 70 Query: 221 HQGAGIGDRFLK----HTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K ++L +++A EE I+++L A N+ + + Sbjct: 71 HK---LGDFMMKVALNALREVDLILFMINA-EEGFGRGDAFIIEQLKAVNTPV-----FL 121 Query: 277 GLSQIDTVDSDTL 289 +++ID V D L Sbjct: 122 VINKIDKVHPDDL 134 >gi|327330244|gb|EGE71993.1| GTP-binding protein HflX [Propionibacterium acnes HL097PA1] Length = 493 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 11/167 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I+G NAGKS+ L +TRA + + F TL P +G + + L D G Sbjct: 272 VPSVAIVGYTNAGKSSLLNRLTRAGVLVENALFATLDPTTRRATTSDG-RVYTLTDTVGF 330 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 +++ H L+ T VLLH+V A + + + LS + EI Sbjct: 331 VRHLPHDLVEAFASTLEETAMADVLLHVVDADDPDPLGQVDAVRGVLSGIGAS--NIPEI 388 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + L++ID + +T+ ++ + S+ TG GI +++E + Sbjct: 389 LVLNKIDRLSDETILTLRSTFPG-----AYLVSAHTGEGIDKLVEAI 430 >gi|312890130|ref|ZP_07749673.1| GTP-binding protein Era [Mucilaginibacter paludis DSM 18603] gi|311297407|gb|EFQ74533.1| GTP-binding protein Era [Mucilaginibacter paludis DSM 18603] Length = 292 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 15/170 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PNAGKST + ++ K I TT + LGIV E + + +D PGIIK Sbjct: 8 VSIIGKPNAGKSTLMNALVGEKMSIITPKAQTTRHRILGIVNEEDYQIVFSDTPGIIKPH 67 Query: 221 HQGAGIGDRFLKHTERTHV---LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + + + + + V ++ +V+ + E + ++D+L + L +V Sbjct: 68 Y---ALQETMMHQVSGSLVDADMVLLVTDINEKYDES--DVMDKLKGSTAPL-----VVI 117 Query: 278 LSQIDTVDSDTLARKKNEL-ATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ID D +T+ +K T F S++ H + I+ + D + Sbjct: 118 INKIDKSDEETVKQKIAYWEETLKPTAVFAISALLNHNVQAIMNLVLDSL 167 >gi|114046809|ref|YP_737359.1| GTP-binding protein EngA [Shewanella sp. MR-7] gi|123131595|sp|Q0HX53|DER_SHESR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|113888251|gb|ABI42302.1| small GTP-binding protein [Shewanella sp. MR-7] Length = 488 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L + A + AA I L + R+K Sbjct: 60 IDGTEEGIETKMAEQSLAAIEEADVVLFMTDA-RAGLTAADLSIAQHLRS-----RQKTT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V ++ID +D+D+ + L G+V ++ ++ G G+ ++E Sbjct: 114 FVVANKIDGIDADSACAEFWSLG--LGEV-YQMAAAQGRGVTNMIE 156 >gi|119961109|ref|YP_947366.1| GTP-binding protein [Arthrobacter aurescens TC1] gi|119947968|gb|ABM06879.1| putative GTP-binding protein [Arthrobacter aurescens TC1] Length = 629 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 21/176 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE----GYKEFILADIP 214 + + I G NAGKS+ L +T A + + F TL P + + GY LAD Sbjct: 407 VPSVAIAGYTNAGKSSLLNRLTDAGVLVENALFATLDPTVRKAQTPDGIGY---TLADTV 463 Query: 215 GIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELR 270 G +++ Q L+ ++LH+V A + + AA + + E+ A R Sbjct: 464 GFVRSLPTQLIEAFRSTLEEVADADLILHVVDASHPDPEGQIAAVRAVFTEVDA-----R 518 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 K EI+ L+++D D + R K + S+ TG GI ++LE + I Sbjct: 519 KVPEIIVLNKVDVADPFVVERLKQKEPRHAV-----VSTRTGQGIAELLEDISRSI 569 >gi|15600136|ref|NP_253630.1| GTP-binding protein [Pseudomonas aeruginosa PAO1] gi|9951223|gb|AAG08328.1|AE004907_6 probable GTP-binding protein [Pseudomonas aeruginosa PAO1] Length = 433 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 2/103 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST S+T ++ A+ F TL P L ++ + +LAD G I Sbjct: 198 IPAVSLVGYTNAGKSTLFNSLTASEVYAANQLFATLDPTLRRLQLDDLGPVVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL 259 ++ H+ L+ + +LLH++ A E A + +L Sbjct: 258 RHLPHKLVEAFRATLEESSNADLLLHVIDAYEPERDAQVEQVL 300 >gi|74202583|dbj|BAE24859.1| unnamed protein product [Mus musculus] Length = 453 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|327479795|gb|AEA83105.1| GTP-binding protein Era [Pseudomonas stutzeri DSM 4166] Length = 303 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + + D PG+ KN Sbjct: 17 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGSVQAVYVDTPGLHKN- 75 Query: 221 HQGAGIGDRFLKHT 234 G +R++ T Sbjct: 76 --GETALNRYMNRT 87 >gi|302838666|ref|XP_002950891.1| hypothetical protein VOLCADRAFT_117695 [Volvox carteri f. nagariensis] gi|300264008|gb|EFJ48206.1| hypothetical protein VOLCADRAFT_117695 [Volvox carteri f. nagariensis] Length = 1071 Score = 43.5 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 5/43 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-----PKIADYPFTTLYPNLG 199 +G++G P+AGKSTF +VT ++A +PFTT+ PN+G Sbjct: 626 VGLVGKPSAGKSTFFNAVTDPASDEDGARVAAFPFTTIAPNVG 668 >gi|262304227|gb|ACY44706.1| GTP-binding protein [Dinothrombium pandorae] Length = 279 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 7/85 (8%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + L H+ A E+ +V+ I D L Sbjct: 35 VVDIAGLVKGASEGQGLGNAFLSHIKACDALFHLCRAFEDEDVTHVEGEVNPIRD-LEII 93 Query: 266 NSELR-KKIEIVGLSQIDTVDSDTL 289 N ELR K IE V SQI+ ++ L Sbjct: 94 NDELRLKDIEFVN-SQIEKLERTVL 117 >gi|24374819|ref|NP_718862.1| GTP-binding protein EngA [Shewanella oneidensis MR-1] gi|37999695|sp|Q8EC36|DER_SHEON RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|24349505|gb|AAN56306.1|AE015769_2 GTP-binding protein EngA [Shewanella oneidensis MR-1] Length = 487 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L + A + AA I L + R+K Sbjct: 60 IDGTEEGIETKMAEQSLAAIEEADVVLFMTDA-RAGLTAADLSIAQHLRS-----RQKTT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V ++ID +D+D+ + L G+V ++ ++ G G+ ++E Sbjct: 114 FVVANKIDGIDADSACAEFWSLG--LGEV-YQMAAAQGRGVTNMIE 156 >gi|227356207|ref|ZP_03840596.1| GTP-binding protein [Proteus mirabilis ATCC 29906] gi|227163671|gb|EEI48587.1| GTP-binding protein [Proteus mirabilis ATCC 29906] Length = 501 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 13/167 (7%) Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPG 215 K+I I ++G PN GKST +TR + +AD+P T G + +EFI+ D G Sbjct: 5 KMIPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELDGEEFIIIDTGG 64 Query: 216 IIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 I A +G + + L+ + ++L +V A + A Q I L + KK Sbjct: 65 -IDGAEEGVETHMASQSLQAIQEADIVLFLVDA-RAGLMPADQGIAKHLRG----VEKKT 118 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 +V ++ D +D DT L G++ F ++ G G+ Q++E Sbjct: 119 YLVA-NKTDGIDIDTALADFYSLG--LGEI-FPIAASHGRGVSQLIE 161 >gi|163749553|ref|ZP_02156800.1| GTP-binding protein EngA [Shewanella benthica KT99] gi|161330663|gb|EDQ01600.1| GTP-binding protein EngA [Shewanella benthica KT99] Length = 492 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRASLSGYEFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + + L E V+L + A + AA I + L R K Sbjct: 60 IDGTEEGIEVHMAQQSLAAIEEADVVLFLTDA-RAGLTAADHAIAEHLRR-----RDKTT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V ++ID +D+D+ A G+V ++ ++ G G+ ++E Sbjct: 114 FVVANKIDGIDADSAC--AEFWALGLGEV-YQMAASQGRGVTNMIE 156 Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 25/189 (13%) Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTT---LYPNLGIVKE 203 Q+++ L +KL IIG PN GKST + + + + D P TT +Y + +V+E Sbjct: 192 QKRLQDLPIKL----AIIGKPNVGKSTLINRILGEERVVVYDSPGTTRDSIY--IPMVRE 245 Query: 204 GYKEFILADIPGIIKNAHQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCIL 259 G +E++L D G+ + + + + LK E +V+L I+ A E + + Sbjct: 246 G-REYVLIDTAGVRRRSKVNETVEKFSVIKTLKAVEDCNVVLLIIDAREGITEQDLGLLG 304 Query: 260 DELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGI 315 L+A + ++ +++ D +D + R K+EL + G + F S++ G G+ Sbjct: 305 FALNA------GRALVIAVNKWDGIDQEIKDRVKSELDRRLGFIDFARIHFISALHGTGV 358 Query: 316 PQILECLHD 324 + E + + Sbjct: 359 GHLYESVEE 367 >gi|170723842|ref|YP_001751530.1| GTP-binding proten HflX [Pseudomonas putida W619] gi|169761845|gb|ACA75161.1| GTP-binding proten HflX [Pseudomonas putida W619] Length = 433 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T + AD F TL P L ++ + +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNALTESDVYAADQLFATLDPTLRRLQLDDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ + + +LLH++ A E + +L L +E Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDAHEPERMEQIEQVLAVLGEIGAE 309 >gi|113969576|ref|YP_733369.1| GTP-binding protein EngA [Shewanella sp. MR-4] gi|117919682|ref|YP_868874.1| GTP-binding protein EngA [Shewanella sp. ANA-3] gi|123029832|sp|Q0HKV5|DER_SHESM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166225858|sp|A0KUJ9|DER_SHESA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|113884260|gb|ABI38312.1| small GTP-binding protein [Shewanella sp. MR-4] gi|117612014|gb|ABK47468.1| small GTP-binding protein [Shewanella sp. ANA-3] Length = 488 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L + A + AA I L + R+K Sbjct: 60 IDGTEEGIETKMAEQSLAAIEEADVVLFMTDA-RAGLTAADLSIAQHLRS-----RQKTT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V ++ID +D+D+ + L G+V ++ ++ G G+ ++E Sbjct: 114 FVVANKIDGIDADSACAEFWSLG--LGEV-YQMAAAQGRGVTNMIE 156 >gi|330957531|gb|EGH57791.1| GTP-binding protein Der [Pseudomonas syringae pv. maculicola str. ES4326] Length = 489 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 74/169 (43%), Gaps = 17/169 (10%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR + I D T G K + +IL D GI Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60 Query: 217 IKNAHQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 + H G+ ++ K + E V+L +V A +A Y D++ + R K Sbjct: 61 SGDEH---GMDEKMAKQSLLAIEEADVVLFLVDA-----RAGYTA-ADQMIGEHLRKRNK 111 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 V ++ID +D + LAR + +P + G GI Q+LE Sbjct: 112 RSYVVANKIDNID-ENLARAEFSPMGLGDAIP--VAGAHGRGISQMLEI 157 >gi|197294660|ref|YP_001799201.1| GTP-binding protein Era [Candidatus Phytoplasma australiense] gi|171853987|emb|CAM11950.1| Glycyl-tRNA synthetase [Candidatus Phytoplasma australiense] Length = 292 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L +T K I +D P TT + +GI E ++I D PGI Sbjct: 8 IAIVGRPNVGKSTLLNVLTNQKIAITSDKPQTTRHKIVGICHESDAQYIFVDTPGI 63 >gi|254238342|ref|ZP_04931665.1| hypothetical protein PACG_04477 [Pseudomonas aeruginosa C3719] gi|126170273|gb|EAZ55784.1| hypothetical protein PACG_04477 [Pseudomonas aeruginosa C3719] Length = 433 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 2/103 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST S+T ++ A+ F TL P L ++ + +LAD G I Sbjct: 198 IPAVSLVGYTNAGKSTLFNSLTASEVYAANQLFATLDPTLRRLQLDDLGPVVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL 259 ++ H+ L+ + +LLH++ A E A + +L Sbjct: 258 RHLPHKLVEAFRATLEESSNADLLLHVIDAYEPERDAQVEQVL 300 >gi|28868645|ref|NP_791264.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato str. DC3000] gi|213971514|ref|ZP_03399625.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato T1] gi|301386119|ref|ZP_07234537.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato Max13] gi|302060181|ref|ZP_07251722.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato K40] gi|302135124|ref|ZP_07261114.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato NCPPB 1108] gi|37999588|sp|Q886Y6|DER_PSESM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|28851883|gb|AAO54959.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato str. DC3000] gi|213923706|gb|EEB57290.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato T1] gi|330872875|gb|EGH07024.1| GTP-binding protein Der [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965919|gb|EGH66179.1| GTP-binding protein Der [Pseudomonas syringae pv. actinidiae str. M302091] gi|331019376|gb|EGH99432.1| GTP-binding protein Der [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 489 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 11/166 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR + I D T G K + +IL D GI Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60 Query: 217 IKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + H + ++ L E V+L +V A +A Y D++ + R K Sbjct: 61 SGDEHGMDEKMAEQSLLAIEEADVVLFLVDA-----RAGYTA-ADQMIGEHLRKRNKRSY 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 V ++ID +D + LAR + +P + G GI Q+LE Sbjct: 115 VVANKIDNID-ENLARAEFSPMGLGDAIP--VAGAHGRGISQMLEI 157 >gi|314922998|gb|EFS86829.1| GTP-binding protein HflX [Propionibacterium acnes HL001PA1] gi|314966774|gb|EFT10873.1| GTP-binding protein HflX [Propionibacterium acnes HL082PA2] gi|314981109|gb|EFT25203.1| GTP-binding protein HflX [Propionibacterium acnes HL110PA3] gi|315091935|gb|EFT63911.1| GTP-binding protein HflX [Propionibacterium acnes HL110PA4] gi|315093309|gb|EFT65285.1| GTP-binding protein HflX [Propionibacterium acnes HL060PA1] gi|315103436|gb|EFT75412.1| GTP-binding protein HflX [Propionibacterium acnes HL050PA2] gi|327327600|gb|EGE69376.1| GTP-binding protein HflX [Propionibacterium acnes HL103PA1] Length = 493 Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I+G NAGKS+ L +TRA + + F TL P +G + + L D G Sbjct: 272 VPSVAIVGYTNAGKSSLLNRLTRAGVLVENALFATLDPTTRRATTSDG-RVYTLTDTVGF 330 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 +++ H L+ T VLLH+V A + + + LS + EI Sbjct: 331 VRHLPHDLVEAFASTLEETAMADVLLHVVDADDPDPLGQVDAVRGVLSGIGAS--NIPEI 388 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 + L++ID + +T+ ++ + S+ TG G +++E + D Sbjct: 389 LVLNKIDRLSDETILTLRSTFPG-----AYLVSAHTGEGTDKLVEAIED 432 >gi|239624090|ref|ZP_04667121.1| ferrous iron transport protein B [Clostridiales bacterium 1_7_47_FAA] gi|239522121|gb|EEQ61987.1| ferrous iron transport protein B [Clostridiales bacterium 1_7_47FAA] Length = 716 Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 15/147 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 +G +G PN GK+T + T AK K+A++P T+ G + + D+PGI + + Sbjct: 58 VGFVGNPNCGKTTLFNAFTGAKLKVANWPGVTVERVEGETSYKGRPIKVIDLPGIYSLTS 117 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + + ++ E V++++V S+LE N+ Q I EL+K + I+ Sbjct: 118 YTIEEKVTRKCIEDGE-VDVIINVVDASSLERNLYLTMQLI---------ELKKPV-ILA 166 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVP 304 L+ +D V+ + + L G++P Sbjct: 167 LNMMDIVEERGMEIDMHRLPEMLGEIP 193 >gi|37197696|dbj|BAC93534.1| predicted GTP-binding protein [Vibrio vulnificus YJ016] Length = 511 Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust. Identities = 41/179 (22%), Positives = 85/179 (47%), Gaps = 13/179 (7%) Query: 152 IWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFIL 210 I +++ +I + ++G PN GKST +TR++ +AD+P T G K G +FI+ Sbjct: 10 IIVEVVMIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIV 69 Query: 211 ADIPGIIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 D G I + +G + ++ L V+L +V +A + ++A+ + Sbjct: 70 IDTGG-IDGSEEGVETKMAEQSLAAIREADVVLFMVDG-----RAGLTPSDEAIAAHLRK 123 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 + K +V ++++D +D+D + +L ++ ++ G G+ ++E D F Sbjct: 124 IEKATMLV-VNKVDGIDADAASADFWQLGVDEM---YQIAAAHGRGVTALIERALDPFF 178 >gi|300781013|ref|ZP_07090867.1| GTP-binding protein HflX [Corynebacterium genitalium ATCC 33030] gi|300532720|gb|EFK53781.1| GTP-binding protein HflX [Corynebacterium genitalium ATCC 33030] Length = 505 Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 11/164 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGIIKN 219 I I G NAGKS+ + ++T A + D F TL P+ + +G + +L D G ++ Sbjct: 280 IAIAGYTNAGKSSLINAMTDAGVLVEDALFATLDPSTRRAELADG-RTVVLTDTVGFVR- 337 Query: 220 AHQGAGIGDRFLKHTERT---HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI--E 274 H + + F E ++LH+V + + + D L+ + ++I E Sbjct: 338 -HLPTQLVEAFKSTLEEVVGADLMLHVVDGSDPFPLKQIKAVNDVLAEITRDTGEEIPPE 396 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 I+ +++ID D LA ++ A V F S++TG GI ++ Sbjct: 397 IIVVNKIDEADPVVLAELRHAFADSKHNVVF-VSAVTGEGIDEL 439 >gi|126655845|ref|ZP_01727284.1| GTP-binding protein, HSR1-related [Cyanothece sp. CCY0110] gi|126623324|gb|EAZ94029.1| GTP-binding protein, HSR1-related [Cyanothece sp. CCY0110] Length = 527 Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust. Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 21/150 (14%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL----GIVKEGYK--EFILAD 212 + I I+G NAGKST + ++T A+ AD F TL P GI + + F+L D Sbjct: 351 VPTIAIVGYTNAGKSTLINALTNAEVYTADQLFATLDPTTRRLSGIDSDTQQLYTFLLTD 410 Query: 213 IPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVS----ALEENVQAAYQCILDELSAY 265 G I + D F L+ LLH+V A + ++Q+ IL E+ Sbjct: 411 TVGFIHEL--PPSLVDAFRATLEEVTEADALLHLVDLSHPAWQHHIQSVM-TILQEMPLV 467 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 + ++ ++IDTVD +TL + E Sbjct: 468 PGPI-----LLVFNKIDTVDGETLRVAQEE 492 >gi|330975909|gb|EGH75975.1| GTP-binding protein Der [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 490 Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 11/166 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR + I D T G K + +IL D GI Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60 Query: 217 IKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + H + ++ L E V+L +V A +A Y D++ + R K Sbjct: 61 SGDEHGMDEKMAEQSLLAIEEADVVLFLVDA-----RAGYTA-ADQMIGEHLRKRNKRSY 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 V ++ID +D + LAR + +P + G GI Q+LE Sbjct: 115 VVANKIDNID-ENLARAEFSPMGLGDAIP--VAGAHGRGISQMLEI 157 >gi|327274440|ref|XP_003221985.1| PREDICTED: nucleolar GTP-binding protein 1-like [Anolis carolinensis] Length = 634 Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 13/114 (11%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA ++ Y FTT +G + Y + + D PGI+ + + Sbjct: 173 LCGYPNVGKSSFINKVTRADVEVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHPLE- 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 ER + + ++AL ++++A ++D L +++E+ G Sbjct: 232 -----------ERNTIEMQAITAL-AHLRSAVLFVMDISEQCGHSLEEQLELFG 273 >gi|326795795|ref|YP_004313615.1| GTP-binding proten HflX [Marinomonas mediterranea MMB-1] gi|326546559|gb|ADZ91779.1| GTP-binding proten HflX [Marinomonas mediterranea MMB-1] Length = 429 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 7/109 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + ++G NAGKST T A+ AD F TL P L ++ E +LAD G I+ Sbjct: 201 VSLVGYTNAGKSTLFNKATGAEVYAADQLFATLDPTLRRLEVEQIGSVVLADTVGFIRQL 260 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVS----ALEENVQAAYQCILDELSA 264 H+ LK + +LLH++ A ++N++ +L+E+ A Sbjct: 261 PHRLVKAFQATLKESSEADLLLHVIDCADIARDDNIKEV-DAVLEEIGA 308 >gi|291411814|ref|XP_002722181.1| PREDICTED: GTP binding protein 4-like [Oryctolagus cuniculus] Length = 633 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|296084421|emb|CBI24980.3| unnamed protein product [Vitis vinifera] Length = 407 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA + Y FTT +G Y + + D PGI+ Sbjct: 124 ILICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPF 183 Query: 222 QGAGI 226 + I Sbjct: 184 EDRNI 188 >gi|220905798|ref|YP_002481109.1| GTP-binding protein Era [Cyanothece sp. PCC 7425] gi|219862409|gb|ACL42748.1| GTP-binding protein Era [Cyanothece sp. PCC 7425] Length = 315 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 9/168 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + +IG PN GKST + + K I T L GI+ + I D PGI K Sbjct: 26 VALIGRPNVGKSTLMNQLIGQKVAITSPVAQTTRNRLRGILTTSTAQLIFVDTPGIHKPH 85 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEE-NVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H +G+ +K+ + +V + + +V+A D A + K +VG++ Sbjct: 86 H---SLGEVLVKNATLAIAAVDLVLFIVDGSVKAGGG---DRFVAELLQKAKTPVMVGVN 139 Query: 280 QIDT-VDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + D D DTL R + L + G +FS++TG G+ + L D + Sbjct: 140 KSDAQTDPDTLDRSYDSLIAEQGWPLVKFSALTGEGLAALQTQLIDAL 187 >gi|317490529|ref|ZP_07949007.1| GTP-binding protein Era [Eggerthella sp. 1_3_56FAA] gi|316910380|gb|EFV32011.1| GTP-binding protein Era [Eggerthella sp. 1_3_56FAA] Length = 307 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 15/165 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGIIKN 219 + ++G PNAGKST + ++ K I T + +EG+ + IL D PG+ K Sbjct: 17 VTLVGRPNAGKSTLINAIMGKKIAITSNTAQTTRHRFRAALTREGF-QLILVDTPGLHK- 74 Query: 220 AHQGAG--IGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 H G + LK E V+ +V A + V + + +L S+ +I+ Sbjct: 75 PHDALGEELNTSALKALEDVDVVAFLVDA-SKPVGTGDEWVAAQLKRARSK-----KILV 128 Query: 278 LSQIDTVDSDTLARKKNELATQCG--QVPFEFSSITGHGIPQILE 320 LS+ID VD + L R++ A Q G E SS TG + ++ Sbjct: 129 LSKIDLVDGEQLDRQRFA-AAQLGDWDAVVELSSQTGEHVQDFVD 172 >gi|170759036|ref|YP_001786422.1| ferrous iron transport protein B [Clostridium botulinum A3 str. Loch Maree] gi|169406025|gb|ACA54436.1| ferrous iron transport protein B [Clostridium botulinum A3 str. Loch Maree] Length = 718 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 79/162 (48%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I ++G PN GK+T +T + + ++P T+ G +K+ +K+ + D+PGI + Sbjct: 6 IALVGNPNCGKTTMFNYLTGSSQYVGNWPGVTVEKKEGKLKQ-HKDVKVIDLPGIYSLSP 64 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R TE+ V+++IV + LE N+ + Q + EL + I+ L Sbjct: 65 YTLEEVITRNYLITEKPEVIINIVDGTNLERNLYLSTQVM---------ELGIPV-IIAL 114 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V K++L+ G E S++ G G ++++ Sbjct: 115 NMMDIVRKSGDIIDKDKLSKSMGCTVVETSALKGDGCKELID 156 >gi|126132180|ref|XP_001382615.1| hypothetical protein PICST_75790 [Scheffersomyces stipitis CBS 6054] gi|126094440|gb|ABN64586.1| nucleolar G-protein [Scheffersomyces stipitis CBS 6054] Length = 640 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL +T+A ++ Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLRCITKADVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGIL 225 >gi|313764468|gb|EFS35832.1| GTP-binding protein HflX [Propionibacterium acnes HL013PA1] gi|313812955|gb|EFS50669.1| GTP-binding protein HflX [Propionibacterium acnes HL025PA1] gi|313816006|gb|EFS53720.1| GTP-binding protein HflX [Propionibacterium acnes HL059PA1] gi|314915460|gb|EFS79291.1| GTP-binding protein HflX [Propionibacterium acnes HL005PA4] gi|314918256|gb|EFS82087.1| GTP-binding protein HflX [Propionibacterium acnes HL050PA1] gi|314920069|gb|EFS83900.1| GTP-binding protein HflX [Propionibacterium acnes HL050PA3] gi|314932083|gb|EFS95914.1| GTP-binding protein HflX [Propionibacterium acnes HL067PA1] gi|314955744|gb|EFT00144.1| GTP-binding protein HflX [Propionibacterium acnes HL027PA1] gi|314958159|gb|EFT02262.1| GTP-binding protein HflX [Propionibacterium acnes HL002PA1] gi|314967820|gb|EFT11919.1| GTP-binding protein HflX [Propionibacterium acnes HL037PA1] gi|315098523|gb|EFT70499.1| GTP-binding protein HflX [Propionibacterium acnes HL059PA2] gi|315101119|gb|EFT73095.1| GTP-binding protein HflX [Propionibacterium acnes HL046PA1] gi|315105395|gb|EFT77371.1| GTP-binding protein HflX [Propionibacterium acnes HL030PA1] gi|315108340|gb|EFT80316.1| GTP-binding protein HflX [Propionibacterium acnes HL030PA2] gi|327450795|gb|EGE97449.1| GTP-binding protein HflX [Propionibacterium acnes HL087PA3] gi|327453860|gb|EGF00515.1| GTP-binding protein HflX [Propionibacterium acnes HL083PA2] gi|328754214|gb|EGF67830.1| GTP-binding protein HflX [Propionibacterium acnes HL087PA1] gi|328754535|gb|EGF68151.1| GTP-binding protein HflX [Propionibacterium acnes HL025PA2] Length = 493 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 11/167 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I+G NAGKS+ L +TRA + + F TL P +G + + L D G Sbjct: 272 VPSVAIVGYTNAGKSSLLNRLTRAGVLVENALFATLDPTTRRATTSDG-RVYTLTDTVGF 330 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 +++ H L+ T VLLH+V A + + + LS + EI Sbjct: 331 VRHLPHDLVEAFASTLEETAMADVLLHVVDADDPDPLGQVDAVRGVLSGIGAS--NIPEI 388 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + L++ID + +T+ ++ + S+ TG GI +++E + Sbjct: 389 LVLNKIDRLSDETILTLRSTFPG-----AYLVSAHTGEGIDKLVEAI 430 >gi|313891295|ref|ZP_07824913.1| ribosome biogenesis GTPase Era [Streptococcus pseudoporcinus SPIN 20026] gi|313120362|gb|EFR43483.1| ribosome biogenesis GTPase Era [Streptococcus pseudoporcinus SPIN 20026] Length = 299 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTEQEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEKRGKGDDMIMERLRNAKIPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ IP ++ L D + Sbjct: 119 VINKIDKVHPDQLLEQIDDFRSQMDFKEIVP--ISALEGNNIPTLMSLLTDNL 169 >gi|299530499|ref|ZP_07043919.1| ferrous iron transport protein B [Comamonas testosteroni S44] gi|298721475|gb|EFI62412.1| ferrous iron transport protein B [Comamonas testosteroni S44] Length = 387 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 19/180 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFILADIPGI 216 + +I ++G NAGKST ++ +A+ AD F TL + E + L+D G Sbjct: 188 VFNISLVGYTNAGKSTLFNAMVKARAYAADQLFATLDTTTRQMYLAEAEESVSLSDTVGF 247 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSEL 269 I++ G+ D F L+ +LLH+V A E +Q Q +L E+ A + Sbjct: 248 IRDLPH--GLVDAFQATLQEAIDADLLLHVVDASNPGFPEQIQQV-QKVLGEIGADDVP- 303 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQ-VPFEF-SSITGHGIPQILECLHDKIF 327 +I+ +++D ++ + ++ G VP F S+ +G G+ Q+ + L D++ Sbjct: 304 ----QILVFNKLDAIEPERQPALLQDMYELDGTPVPRVFVSARSGQGLAQLRQMLADRVL 359 >gi|325989660|ref|YP_004249359.1| GTP-binding protein Obg/CgtA [Mycoplasma suis KI3806] gi|323574745|emb|CBZ40401.1| GTP-binding protein Obg/CgtA [Mycoplasma suis] Length = 390 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 51/165 (30%), Positives = 87/165 (52%), Gaps = 3/165 (1%) Query: 7 AKVYIRSGDGGAGGISFRREKFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDF-RYQQHF 65 K+ +++G GG G IS+ R ++ GP+GG+GG GG +++ +N RY + Sbjct: 5 VKIKLQAGRGGDGIISWARNRYNSRMGPNGGNGGNGGSIYLVVNKKINDFSSINRY--LW 62 Query: 66 KAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFEEDGISLICDLDQEGQRIILAPGGNGGF 125 KA++G G + ++ G KG D+ + +P T+V++ + + ++ GG GG Sbjct: 63 KAENGFPGQRDSKFGLKGRDISIDIPENTEVYDFGEKIKRTTVTSDSPTYLVCRGGKGGR 122 Query: 126 GNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNA 170 GN FKS+ Q+P G G+++ I L L IGII L ++ Sbjct: 123 GNKSFKSARYQSPQLYELGEKGEQRKILLILSKFKRIGIINLLDS 167 >gi|313827765|gb|EFS65479.1| GTP-binding protein HflX [Propionibacterium acnes HL063PA2] Length = 493 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 11/167 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I+G NAGKS+ L +TRA + + F TL P +G + + L D G Sbjct: 272 VPSVAIVGYTNAGKSSLLNRLTRAGVLVENALFATLDPTTRRATTSDG-RVYTLTDTVGF 330 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 +++ H L+ T VLLH+V A + + + LS + EI Sbjct: 331 VRHLPHDLVEAFASTLEETAMADVLLHVVDADDPDPLGQVDAVRGVLSGIGAS--NIPEI 388 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + L++ID + +T+ ++ + S+ TG GI +++E + Sbjct: 389 LVLNKIDRLSDETILTLRSTFPG-----AYLVSAHTGEGIDKLVEAI 430 >gi|305663578|ref|YP_003859866.1| TGS domain protein [Ignisphaera aggregans DSM 17230] gi|304378147|gb|ADM27986.1| TGS domain protein [Ignisphaera aggregans DSM 17230] Length = 386 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 36/58 (62%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 A + ++G +GKS+ L S+T A +I++ P+TT YP +G++ +F L + P II Sbjct: 83 AQVVLVGYTKSGKSSILKSLTNANVEISEIPYTTKYPVVGMLPYEDIQFQLVEAPSII 140 >gi|302185741|ref|ZP_07262414.1| GTP-binding protein EngA [Pseudomonas syringae pv. syringae 642] gi|330950783|gb|EGH51043.1| GTP-binding protein Der [Pseudomonas syringae Cit 7] Length = 490 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 11/166 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR + I D T G K + +IL D GI Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60 Query: 217 IKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + H + ++ L E V+L +V A +A Y D++ + R K Sbjct: 61 SGDEHGMDEKMAEQSLLAIEEADVVLFLVDA-----RAGYTA-ADQMIGEHLRKRNKRSY 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 V ++ID +D + LAR + +P + G GI Q+LE Sbjct: 115 VVANKIDNID-ENLARAEFSPMGLGDAIP--VAGAHGRGISQMLEI 157 >gi|296411118|ref|XP_002835282.1| hypothetical protein [Tuber melanosporum Mel28] gi|295628057|emb|CAZ79403.1| unnamed protein product [Tuber melanosporum] Length = 359 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 43/84 (51%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 D +G P+ GKST L +T + A Y FTTL G V + + D+PGII+ A Sbjct: 57 DCVSVGFPSVGKSTLLNLLTGTHSEAAAYEFTTLTTVPGCVMYNGAKIQMLDLPGIIQGA 116 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV 244 G G G + + ++ +++ ++ Sbjct: 117 KDGKGRGRQVIAVAKQCNLIFIVL 140 >gi|289626149|ref|ZP_06459103.1| GTP-binding protein EngA [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649055|ref|ZP_06480398.1| GTP-binding protein EngA [Pseudomonas syringae pv. aesculi str. 2250] gi|298486027|ref|ZP_07004101.1| GTP-binding protein EngA [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159504|gb|EFI00551.1| GTP-binding protein EngA [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330869573|gb|EGH04282.1| GTP-binding protein Der [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 490 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 11/166 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR + I D T G K + +IL D GI Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60 Query: 217 IKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + H + ++ L E V+L +V A +A Y D++ + R K Sbjct: 61 SGDEHGMDEKMAEQSLLAIEEADVVLFLVDA-----RAGYTA-ADQMIGEHLRKRNKRSY 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 V ++ID +D + LAR + +P + G GI Q+LE Sbjct: 115 VVANKIDNID-ENLARAEFSPMGLGDAIP--VAGAHGRGISQMLEI 157 >gi|257076790|ref|ZP_05571151.1| GTP-binding protein [Ferroplasma acidarmanus fer1] Length = 327 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Query: 158 LIADIG---IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIP 214 +I DI I G+PN+GKS+ + +T P IA YPFTT +G G + D P Sbjct: 158 IITDIPTFIIAGIPNSGKSSLIQKLTGTTPDIASYPFTTKEILIGYKNIGTRRVQFIDTP 217 Query: 215 GII 217 GI+ Sbjct: 218 GIL 220 >gi|160872884|ref|ZP_02063016.1| GTP-binding protein Era [Rickettsiella grylli] gi|159121683|gb|EDP47021.1| GTP-binding protein Era [Rickettsiella grylli] Length = 294 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I IIG PN GKST L + K I + P TT LGI + + +FI D PGI++NA Sbjct: 11 IAIIGRPNVGKSTLLNKILGEKLTITSSKPQTTRDQILGIKTDLHTQFIYKDTPGILQNA 70 >gi|66044500|ref|YP_234341.1| GTP-binding protein EngA [Pseudomonas syringae pv. syringae B728a] gi|81308464|sp|Q4ZX19|DER_PSEU2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|63255207|gb|AAY36303.1| Small GTP-binding protein domain:GTP-binding [Pseudomonas syringae pv. syringae B728a] Length = 490 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 11/166 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR + I D T G K + +IL D GI Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60 Query: 217 IKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + H + ++ L E V+L +V A +A Y D++ + R K Sbjct: 61 SGDEHGMDEKMAEQSLLAIEEADVVLFLVDA-----RAGYTA-ADQMIGEHLRKRNKRSY 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 V ++ID +D + LAR + +P + G GI Q+LE Sbjct: 115 VVANKIDNID-ENLARAEFSPMGLGDAIP--VAGAHGRGISQMLEI 157 >gi|93005226|ref|YP_579663.1| GTP-binding protein, HSR1-related [Psychrobacter cryohalolentis K5] gi|92392904|gb|ABE74179.1| GTP-binding protein, HSR1-related [Psychrobacter cryohalolentis K5] Length = 489 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 2/113 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + I ++G NAGKST + AD F TL P L + +G +L D G + Sbjct: 199 VPTISLVGYTNAGKSTLFNRLVDENIYAADKLFATLDPTLRRLDWQGVGRVVLVDTVGFV 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 ++ H+ L+ T +LLH++ + E++ Q + D L+ ++++ Sbjct: 259 RHLPHELVESFHATLEETLEADLLLHVIDSSSEDMHEQIQAVKDVLAEIDNDV 311 >gi|289425141|ref|ZP_06426918.1| GTP-binding protein HflX [Propionibacterium acnes SK187] gi|289154119|gb|EFD02807.1| GTP-binding protein HflX [Propionibacterium acnes SK187] Length = 483 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 11/167 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I+G NAGKS+ L +TRA + + F TL P +G + + L D G Sbjct: 262 VPSVAIVGYTNAGKSSLLNRLTRAGVLVENALFATLDPTTRRATTSDG-RVYTLTDTVGF 320 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 +++ H L+ T VLLH+V A + + + LS + EI Sbjct: 321 VRHLPHDLVEAFASTLEETAMADVLLHVVDADDPDPLGQVDAVRGVLSGIGAS--NIPEI 378 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + L++ID + +T+ ++ + S+ TG GI +++E + Sbjct: 379 LVLNKIDRLSDETILTLRSTFPG-----AYLVSAHTGEGIDKLVEAI 420 >gi|71735846|ref|YP_273582.1| GTP-binding protein EngA [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487194|ref|ZP_05641235.1| GTP-binding protein EngA [Pseudomonas syringae pv. tabaci ATCC 11528] gi|123637657|sp|Q48LZ0|DER_PSE14 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|71556399|gb|AAZ35610.1| GTP-binding protein engA [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322917|gb|EFW79007.1| GTP-binding protein EngA [Pseudomonas syringae pv. glycinea str. B076] gi|320329960|gb|EFW85948.1| GTP-binding protein EngA [Pseudomonas syringae pv. glycinea str. race 4] gi|330985018|gb|EGH83121.1| GTP-binding protein Der [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009189|gb|EGH89245.1| GTP-binding protein Der [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 490 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 11/166 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR + I D T G K + +IL D GI Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60 Query: 217 IKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + H + ++ L E V+L +V A +A Y D++ + R K Sbjct: 61 SGDEHGMDEKMAEQSLLAIEEADVVLFLVDA-----RAGYTA-ADQMIGEHLRKRNKRSY 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 V ++ID +D + LAR + +P + G GI Q+LE Sbjct: 115 VVANKIDNID-ENLARAEFSPMGLGDAIP--VAGAHGRGISQMLEI 157 >gi|71064931|ref|YP_263658.1| GTP - binding protein, phage lambda cII repressor [Psychrobacter arcticus 273-4] gi|71037916|gb|AAZ18224.1| probable GTP - binding protein, possible phage lambda cII repressor [Psychrobacter arcticus 273-4] Length = 489 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 2/113 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + I ++G NAGKST + AD F TL P L + +G +L D G + Sbjct: 199 VPTISLVGYTNAGKSTLFNRLVDENIYAADKLFATLDPTLRRLDWQGVGRVVLVDTVGFV 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 ++ H+ L+ T +LLH++ + E++ Q + D L+ ++++ Sbjct: 259 RHLPHELVESFHATLEETLEADLLLHVIDSSSEDMHEQIQAVKDVLAEIDNDV 311 >gi|21242485|ref|NP_642067.1| GTP-binding protein [Xanthomonas axonopodis pv. citri str. 306] gi|21107933|gb|AAM36603.1| GTP-binding protein [Xanthomonas axonopodis pv. citri str. 306] Length = 439 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 1/86 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 I ++G NAGKST +T A+ +AD F TL P + + ILAD G +++ Sbjct: 201 IALVGYTNAGKSTLFNVLTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLP 260 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA 246 H+ L +LLH+V A Sbjct: 261 HELVAAFRSTLSEARDADLLLHVVDA 286 >gi|313807506|gb|EFS45993.1| GTP-binding protein HflX [Propionibacterium acnes HL087PA2] gi|313818548|gb|EFS56262.1| GTP-binding protein HflX [Propionibacterium acnes HL046PA2] gi|313820315|gb|EFS58029.1| GTP-binding protein HflX [Propionibacterium acnes HL036PA1] gi|313822878|gb|EFS60592.1| GTP-binding protein HflX [Propionibacterium acnes HL036PA2] gi|313825190|gb|EFS62904.1| GTP-binding protein HflX [Propionibacterium acnes HL063PA1] gi|314925202|gb|EFS89033.1| GTP-binding protein HflX [Propionibacterium acnes HL036PA3] gi|314960015|gb|EFT04117.1| GTP-binding protein HflX [Propionibacterium acnes HL002PA2] gi|314978437|gb|EFT22531.1| GTP-binding protein HflX [Propionibacterium acnes HL072PA2] gi|314988138|gb|EFT32229.1| GTP-binding protein HflX [Propionibacterium acnes HL005PA2] gi|314989942|gb|EFT34033.1| GTP-binding protein HflX [Propionibacterium acnes HL005PA3] gi|315084326|gb|EFT56302.1| GTP-binding protein HflX [Propionibacterium acnes HL027PA2] gi|315085668|gb|EFT57644.1| GTP-binding protein HflX [Propionibacterium acnes HL002PA3] gi|315088910|gb|EFT60886.1| GTP-binding protein HflX [Propionibacterium acnes HL072PA1] gi|327331951|gb|EGE73688.1| GTP-binding protein HflX [Propionibacterium acnes HL096PA3] gi|327443152|gb|EGE89806.1| GTP-binding protein HflX [Propionibacterium acnes HL013PA2] gi|328753483|gb|EGF67099.1| GTP-binding protein HflX [Propionibacterium acnes HL020PA1] Length = 493 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 11/167 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I+G NAGKS+ L +TRA + + F TL P +G + + L D G Sbjct: 272 VPSVAIVGYTNAGKSSLLNRLTRAGVLVENALFATLDPTTRRATTSDG-RVYTLTDTVGF 330 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 +++ H L+ T VLLH+V A + + + LS + EI Sbjct: 331 VRHLPHDLVEAFASTLEETAMADVLLHVVDADDPDPLGQVDAVRGVLSGIGAS--NIPEI 388 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + L++ID + +T+ ++ + S+ TG GI +++E + Sbjct: 389 LVLNKIDRLSDETILTLRSTFPG-----AYLVSAHTGEGIDKLVEAI 430 >gi|312880570|ref|ZP_07740370.1| small GTP-binding protein [Aminomonas paucivorans DSM 12260] gi|310783861|gb|EFQ24259.1| small GTP-binding protein [Aminomonas paucivorans DSM 12260] Length = 598 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 37/163 (22%), Positives = 72/163 (44%), Gaps = 12/163 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG--IIKNAH 221 ++G PN GKS + +T ++YP TT+ G + G + + L D+PG ++ + Sbjct: 31 LVGNPNVGKSALFSRLTGTHALSSNYPGTTVGFLEGRLAHGERCYRLVDVPGAYTLEATN 90 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQI 281 + I R + +L+ +ALE N+ A + + +L A +V L+ + Sbjct: 91 EAEEIASRIVDEGADAAILVLDATALERNLVLALEVLERKLPA----------LVALNMV 140 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 D ++ L G ++TG G+ ++L+ L + Sbjct: 141 DEARHKGISVDPAALEEALGIPVVSTVAVTGQGVKELLDRLPE 183 >gi|297617800|ref|YP_003702959.1| GTP-binding protein Era [Syntrophothermus lipocalidus DSM 12680] gi|297145637|gb|ADI02394.1| GTP-binding protein Era [Syntrophothermus lipocalidus DSM 12680] Length = 294 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 8/131 (6%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I+G PN GKSTFL +V K I ++ P TT GI + I D PGI + H Sbjct: 9 SIVGRPNVGKSTFLNTVIGQKVAIVSEKPQTTRNRIQGIYTCEQGQIIFIDTPGIHRPRH 68 Query: 222 QGAGIGDRFLKHTER-THVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 + R T R V+L++VSA ++ ++ + I++ L+ ++ + + +++ Sbjct: 69 KLGEYMVRTAHATAREADVVLYMVSA-KDGMEKGDEEIIEFLTKTSAPV-----FLVVNK 122 Query: 281 IDTVDSDTLAR 291 ID VD D ++R Sbjct: 123 IDLVDQDEVSR 133 >gi|317052196|ref|YP_004113312.1| small GTP-binding protein [Desulfurispirillum indicum S5] gi|316947280|gb|ADU66756.1| small GTP-binding protein [Desulfurispirillum indicum S5] Length = 588 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 28/169 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I ++G PN GKS + +T + A+Y TT+ GIV+ K+ +L D+PG ++ Sbjct: 21 ILLMGNPNVGKSVIFSRLTGMNVRTANYAGTTVNYTHGIVQYHGKKALLTDVPGTYSLEA 80 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQC------ILDELSAYNSELRK 271 + + L E HV+L ++ A LE N+ A Q ++ L+ + RK Sbjct: 81 TSPAEEVATKLLA--EGAHVVLCVLDATNLERNLPLALQIRQTGLPVVYALNLSDVARRK 138 Query: 272 KIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 I T+D+D LA+ + G S++ G G+ +L+ Sbjct: 139 GI---------TIDTDALAK-------ELGAPVIATSAVKGEGLKTLLD 171 >gi|239614313|gb|EEQ91300.1| nucleolar GTP-binding protein [Ajellomyces dermatitidis ER-3] Length = 409 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 32/60 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL ++T+A + Y FTT +G Y F D PGI+ + +G Sbjct: 172 ICGYPNVGKSSFLRNITKADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGILDHPLEG 231 >gi|260948536|ref|XP_002618565.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] gi|238848437|gb|EEQ37901.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] Length = 636 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL +T+A ++ Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLRCITKADVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGIL 225 >gi|225872038|ref|YP_002753492.1| ferrous iron transport protein B [Acidobacterium capsulatum ATCC 51196] gi|225793022|gb|ACO33112.1| ferrous iron transport protein B [Acidobacterium capsulatum ATCC 51196] Length = 632 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGI 216 + ++G PN+GKST +T + K+A+YP T+ +LG +K G + +L D+PGI Sbjct: 25 VALVGPPNSGKSTLFNRLTGLRQKVANYPGVTVEQHLGRMKGIGRPDLVLIDLPGI 80 >gi|239625640|ref|ZP_04668671.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239519870|gb|EEQ59736.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 424 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 80/187 (42%), Gaps = 37/187 (19%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNAH 221 I+G NAGKST L +T A D F TL P V E ++ +L D G I Sbjct: 202 AIVGYTNAGKSTLLNRLTGAGILAEDKLFATLDPTTRSFVMEDGQQILLTDTVGFI---- 257 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQ-CILDELSAYNSELRKKIEIV--GL 278 R L H H++ S LEE A Y IL + N ++ ++ +V L Sbjct: 258 -------RKLPH----HLIEAFKSTLEE---ARYSDIILHVVDCSNPQMDMQMHVVKETL 303 Query: 279 SQIDTVDSDTL-----ARKKNELATQCGQ--VPFEFSS--------ITGHGIPQILECLH 323 +++ VD T+ + NE T+ G VP +FSS TG GI ++ + L Sbjct: 304 RELEIVDKTTVTVFNKTDRLNEEGTEDGMHPVPRDFSSDYQVRISARTGEGIDELEQILR 363 Query: 324 DKIFSIR 330 I S R Sbjct: 364 TIIRSRR 370 >gi|149055308|gb|EDM06962.1| rCG30555 [Rattus norvegicus] Length = 371 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|50421263|ref|XP_459177.1| DEHA2D15950p [Debaryomyces hansenii CBS767] gi|49654844|emb|CAG87348.1| DEHA2D15950p [Debaryomyces hansenii] Length = 641 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL +T+A ++ Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLKCITKADVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGIL 225 >gi|78047325|ref|YP_363500.1| GTP-binding protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|294665636|ref|ZP_06730913.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|78035755|emb|CAJ23446.1| GTP-binding protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292604582|gb|EFF47956.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 439 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 1/86 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 I ++G NAGKST +T A+ +AD F TL P + + ILAD G +++ Sbjct: 201 IALVGYTNAGKSTLFNVLTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLP 260 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA 246 H+ L +LLH+V A Sbjct: 261 HELVAAFRSTLSEARDADLLLHVVDA 286 >gi|294626633|ref|ZP_06705230.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599053|gb|EFF43193.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 439 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 1/86 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 I ++G NAGKST +T A+ +AD F TL P + + ILAD G +++ Sbjct: 201 IALVGYTNAGKSTLFNVLTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLP 260 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA 246 H+ L +LLH+V A Sbjct: 261 HELVAAFRSTLSEARDADLLLHVVDA 286 >gi|46201859|ref|ZP_00054208.2| COG1159: GTPase [Magnetospirillum magnetotacticum MS-1] Length = 303 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 11/165 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGII--K 218 + ++G PNAGKST + ++ K I TT + +GI G + +L D PGI K Sbjct: 14 VAVVGAPNAGKSTLVNALVGTKVSIVSPKVQTTRFRVMGIAMVGEAQVVLVDTPGIFAPK 73 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + A + + + H+ L I +A + + I+D+L K+ I+ L Sbjct: 74 KRLERAMVAAAWGGTNDADHICLLIDAA--KGYDDESRAIVDKLKET-----KRQAILVL 126 Query: 279 SQIDTVDSDTLARKKNEL-ATQCGQVPFEFSSITGHGIPQILECL 322 +++D V D L +L A F S++ G GI +L L Sbjct: 127 NKVDLVKRDKLLGLTAQLDAEGIFTDVFMISALKGDGIDDLLAHL 171 >gi|302186918|ref|ZP_07263591.1| GTP-binding protein Era [Pseudomonas syringae pv. syringae 642] Length = 300 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ KN Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGTVQAIYVDTPGMHKNG 71 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 72 EKAL---NRYMNKT 82 >gi|254584540|ref|XP_002497838.1| ZYRO0F14674p [Zygosaccharomyces rouxii] gi|238940731|emb|CAR28905.1| ZYRO0F14674p [Zygosaccharomyces rouxii] Length = 647 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL +T+A ++ Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLRCITKADVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGIL 225 >gi|18311867|ref|NP_558534.1| iron (II) transporter (feoB-2) part 2, conjectural, authentic frameshift [Pyrobaculum aerophilum str. IM2] gi|18159280|gb|AAL62716.1| iron (II) transporter (feoB-2) part 2, conjectural, authentic frameshift [Pyrobaculum aerophilum str. IM2] Length = 92 Score = 43.5 bits (101), Expect = 0.048, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 31/55 (56%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 IIG PN GKS ++T K A+YP TTL G+VK+G L D+ G++ Sbjct: 5 AIIGPPNVGKSALFYALTGVFVKTANYPGTTLELQKGVVKKGSYSVELVDLSGVL 59 >gi|264679417|ref|YP_003279324.1| ferrous iron transporter B [Comamonas testosteroni CNB-2] gi|262209930|gb|ACY34028.1| ferrous iron transport protein B [Comamonas testosteroni CNB-2] Length = 387 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 19/180 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFILADIPGI 216 + +I ++G NAGKST ++ +A+ AD F TL + E + L+D G Sbjct: 188 VFNISLVGYTNAGKSTLFNAMVKARAYAADQLFATLDTTTRQMYLAEAEESVSLSDTVGF 247 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSEL 269 I++ G+ D F L+ +LLH+V A E +Q Q +L E+ A + Sbjct: 248 IRDLPH--GLVDAFQATLQEAIDADLLLHVVDASNPGFPEQIQQV-QKVLGEIGADDVP- 303 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQ-VPFEF-SSITGHGIPQILECLHDKIF 327 +I+ +++D ++ + ++ G VP F S+ +G G+ Q+ + L D++ Sbjct: 304 ----QILVFNKLDAIEPERQPALLQDMYELDGTPVPRVFVSARSGRGLAQLRQMLADRVL 359 >gi|227874499|ref|ZP_03992671.1| GTP-binding protein Era [Oribacterium sinus F0268] gi|227839643|gb|EEJ50101.1| GTP-binding protein Era [Oribacterium sinus F0268] Length = 319 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 22/176 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+GLPNAGKST L ++ K I + P TT + + E + + D PGI K Sbjct: 29 VSIVGLPNAGKSTLLNALIGQKVAITSKKPQTTRNQIMAVYDEERGQIVFHDTPGIHKAK 88 Query: 221 HQGA----GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +Q + + ++ L + + ++L+IV A E+ + Q LS RK I + Sbjct: 89 NQLSVYMESVAEKALGNGD---LVLYIVDATEQKGEKEEQI----LSLLKHSKRKIILV- 140 Query: 277 GLSQIDTV-DSDTLARKKNELATQCGQVPFEFSSITGHGI--PQILECLHDKIFSI 329 L+++D + D +KK + + +F++I G Q LE L D +F + Sbjct: 141 -LNKLDLLGGEDAFLKKKEDYEKE-----LDFAAIVGISAYKSQGLEELKDILFDL 190 >gi|54293917|ref|YP_126332.1| GTP-binding protein Era [Legionella pneumophila str. Lens] gi|53753749|emb|CAH15207.1| hypothetical protein lpl0973 [Legionella pneumophila str. Lens] Length = 311 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 6/75 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST L + + K I P TT + LGI E +F+ D PGI Sbjct: 24 IALVGRPNVGKSTLLNRILQQKLSITSRKPQTTRHSILGIRTEDEFQFVYVDTPGI---- 79 Query: 221 HQG-AGIGDRFLKHT 234 HQG A +R + T Sbjct: 80 HQGNAKAINRMMNKT 94 >gi|154247805|ref|YP_001418763.1| GTP-binding protein Era [Xanthobacter autotrophicus Py2] gi|154161890|gb|ABS69106.1| GTP-binding protein Era [Xanthobacter autotrophicus Py2] Length = 385 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 15/171 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PNAGKST + K I + TT GI +G + +L D PGI Sbjct: 94 VALLGAPNAGKSTLTNQLVGTKVSIVSHKVQTTRAIVRGIALDGAAQLVLVDTPGIFSPK 153 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 + +R + + TH V AL + + ++ L A S++ K ++ L++ Sbjct: 154 RR----LERAMVSSAWTHAADADVIALLVDAKRGLDEDIEALLAPLSQIHKPRALI-LNK 208 Query: 281 IDTVDSDTLARKKNELATQCGQ-----VPFEFSSITGHGIPQILECLHDKI 326 ID + DTL LA Q + F S++TG G+ + +++ Sbjct: 209 IDIIRRDTLL----ALAAQINEKLAFDRVFMVSALTGDGVADVRRWFAEQV 255 >gi|254509743|ref|ZP_05121810.1| GTP-binding proten HflX [Rhodobacteraceae bacterium KLH11] gi|221533454|gb|EEE36442.1| GTP-binding proten HflX [Rhodobacteraceae bacterium KLH11] Length = 423 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 15/179 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + ++G NAGKST S+T A+ D F TL P + V+ + E IL+D G I N Sbjct: 205 VALVGYTNAGKSTLFNSLTGAEVMAKDMLFATLDPTMRRVELQDGPEVILSDTVGFISNL 264 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN-SELRKKIEIVGL 278 R L+ +++H+ E+ +A Q + L++ + R ++E+ Sbjct: 265 PTELVAAFRATLEEVLGADLVVHVRDISHEDSEAQAQDVETILASLGVDDDRPRLEV--W 322 Query: 279 SQIDTVDSD----TLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 ++ID + ++ TLAR A + QV F S++TG G+ +L + K+ R ++ Sbjct: 323 NKIDLLGAEAREATLAR-----AERDPQV-FAISAVTGEGVAPLLTEIATKLQGTRHQH 375 >gi|149178557|ref|ZP_01857144.1| GTP-binding protein Hflx [Planctomyces maris DSM 8797] gi|148842575|gb|EDL56951.1| GTP-binding protein Hflx [Planctomyces maris DSM 8797] Length = 450 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 28/179 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL--------YPNLGIVKEGYKEFILADI 213 + ++G NAGKST + ++T A IAD F TL P+ G E +L+D Sbjct: 206 VSLVGYTNAGKSTLMNALTGADVYIADQLFATLDTRTRRWELPHWG-------EILLSDT 258 Query: 214 PGIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNSEL 269 G +++ H L+ + +LLH+V V+ + +LDE+ E+ Sbjct: 259 VGFVRDLPHHLVASFKSTLEEARQADLLLHVVDCSNPEVEHHIKTVNKVLDEI-----EI 313 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 K I+ ++ D V+ R K ++ S+++G G+ ++ + + D++ S Sbjct: 314 EHKNAILVFNKTDKVED----RSKLDVLRLKYDNAISVSAVSGEGLDRLSQAVIDRLAS 368 >gi|28871358|ref|NP_793977.1| GTP-binding protein Era [Pseudomonas syringae pv. tomato str. DC3000] gi|38257314|sp|Q87XG2|ERA_PSESM RecName: Full=GTPase Era gi|28854609|gb|AAO57672.1| GTP-binding protein Era [Pseudomonas syringae pv. tomato str. DC3000] Length = 300 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ KN Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGTVQAIYVDTPGMHKNG 71 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 72 EKAL---NRYMNKT 82 >gi|295398008|ref|ZP_06808064.1| GTP-binding protein Era [Aerococcus viridans ATCC 11563] gi|294973766|gb|EFG49537.1| GTP-binding protein Era [Aerococcus viridans ATCC 11563] Length = 332 Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 13/168 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT + + + D PGI K Sbjct: 40 VAIVGRPNVGKSTFLNRVVGQKVAIMSDKAQTTRNKIQAVYTTDEAQIVFIDTPGIHKPH 99 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 ++ G + + E +L +V+A EE + + + +++ Y + RK +G++ Sbjct: 100 NELGEFMNKSAYQSLEEVDAILMLVNA-EEPIGPGDKFVFEKIKNYKT--RK---FLGVN 153 Query: 280 QIDTVDSDTLARKKNELATQ---CGQVPFEFSSITGHGIPQILECLHD 324 +ID V + LA + + G +P S++ G+ + +++ L D Sbjct: 154 KIDKVSPEALAEFMQTIPSPESFDGIIP--LSALNGNNVETLIDTLVD 199 >gi|148360408|ref|YP_001251615.1| GTP-binding protein Era [Legionella pneumophila str. Corby] gi|148282181|gb|ABQ56269.1| GTP-binding protein Era [Legionella pneumophila str. Corby] Length = 311 Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 6/75 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST L + + K I P TT + LGI E +F+ D PGI Sbjct: 24 IALVGRPNVGKSTLLNRILQQKLSITSRKPQTTRHSILGIRTEDEFQFVYVDTPGI---- 79 Query: 221 HQG-AGIGDRFLKHT 234 HQG A +R + T Sbjct: 80 HQGNAKAINRMMNKT 94 >gi|304311812|ref|YP_003811410.1| GTP-binding protein [gamma proteobacterium HdN1] gi|301797545|emb|CBL45765.1| GTP-binding protein [gamma proteobacterium HdN1] Length = 474 Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 15/176 (8%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGII- 217 A + ++G PN GKST +T+ + I AD P T G + G F++ D GI Sbjct: 3 AAVALVGRPNVGKSTLFNRLTKTRDAIVADMPGLTRDRKYGEARVGAHAFLVIDTGGITG 62 Query: 218 KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + + + ++ + E ++ IV A A DE+ A +R+K V Sbjct: 63 EEEGIDSLMAEQSMLAIEEADLVFFIVDA------KAGLTAGDEVLAQRLRVREKPLYVV 116 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 +++ID DSD + + L G PF S+ G G+ Q++ D +F GE+ Sbjct: 117 VNKIDGQDSDEALAEFSRLG--LGD-PFFISASHGRGVTQMI----DDVFGAVGED 165 >gi|156838595|ref|XP_001643000.1| hypothetical protein Kpol_397p1 [Vanderwaltozyma polyspora DSM 70294] gi|156113586|gb|EDO15142.1| hypothetical protein Kpol_397p1 [Vanderwaltozyma polyspora DSM 70294] Length = 647 Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL +T+A ++ Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLRCITKADVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGIL 225 >gi|325927205|ref|ZP_08188466.1| GTP-binding proten HflX [Xanthomonas perforans 91-118] gi|325542433|gb|EGD13914.1| GTP-binding proten HflX [Xanthomonas perforans 91-118] Length = 413 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 1/86 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 I ++G NAGKST +T A+ +AD F TL P + + ILAD G +++ Sbjct: 175 IALVGYTNAGKSTLFNVLTGAEAYVADQLFATLDPTVRRIALPGGSAILADTVGFVRDLP 234 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA 246 H+ L +LLH+V A Sbjct: 235 HELVAAFRSTLSEARDADLLLHVVDA 260 >gi|300113239|ref|YP_003759814.1| GTP-binding proten HflX [Nitrosococcus watsonii C-113] gi|299539176|gb|ADJ27493.1| GTP-binding proten HflX [Nitrosococcus watsonii C-113] Length = 382 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 2/94 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + ++G N GKST +T ++ + D F TL P L ++ + ILAD G I Sbjct: 202 VPTVSLVGYTNVGKSTLFNRLTASRVLVDDRLFATLDPTLRRLRLAMVQPLILADTVGFI 261 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 ++ H+ L+ T +LLH+V A E Sbjct: 262 RHLPHELVEAFRSTLEETRDAALLLHVVDASSEE 295 >gi|12847799|dbj|BAB27714.1| unnamed protein product [Mus musculus] Length = 346 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|308048239|ref|YP_003911805.1| GTP-binding protein HflX [Ferrimonas balearica DSM 9799] gi|307630429|gb|ADN74731.1| GTP-binding protein HflX [Ferrimonas balearica DSM 9799] Length = 428 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 7/112 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T + AD F TL P L ++ +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNRITDSGVYAADQLFATLDPTLRRIEVADVGPVVLADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSA 264 ++ H L T +LLH++ A + ENV+A + +L E+ A Sbjct: 257 RHLPHDLVAAFKGTLTETREADLLLHVIDAADERAVENVEAVNE-VLAEIEA 307 >gi|306843975|ref|ZP_07476570.1| GTP-binding proten HflX [Brucella sp. BO1] gi|306275730|gb|EFM57454.1| GTP-binding proten HflX [Brucella sp. BO1] Length = 472 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL D G I N Sbjct: 235 VALVGYTNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILLDTVGFISNL 294 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ ++LH+ + + A + + + L+ E + +V + Sbjct: 295 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 354 Query: 279 SQIDTVDSDTLARKKNELA--TQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A ++ G+ P S+ITG G+ ++L + +I Sbjct: 355 NKIDNLDESAREAALRLAAAGSEEGR-PIPVSAITGEGVDRLLSLIETRI 403 >gi|302789093|ref|XP_002976315.1| hypothetical protein SELMODRAFT_105247 [Selaginella moellendorffii] gi|300155945|gb|EFJ22575.1| hypothetical protein SELMODRAFT_105247 [Selaginella moellendorffii] Length = 313 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 35/56 (62%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + ++G PN GKS+ + ++ KP++ +YPFTT ++G + + + + D PG++ Sbjct: 168 LCLVGAPNVGKSSLVRVLSTGKPEVCNYPFTTRAISMGHIMDYAFSYQVTDTPGLL 223 >gi|298488678|ref|ZP_07006707.1| GTP-binding protein Era [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156751|gb|EFH97842.1| GTP-binding protein Era [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 300 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ KN Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGAVQAIYVDTPGMHKNG 71 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 72 EKAL---NRYMNKT 82 >gi|88802178|ref|ZP_01117706.1| putative GTP-binding protein [Polaribacter irgensii 23-P] gi|88782836|gb|EAR14013.1| putative GTP-binding protein [Polaribacter irgensii 23-P] Length = 294 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 16/169 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + ++ K I TT + LGIV E + + +D PGIIK A Sbjct: 8 VNIIGNPNVGKSTLMNALVGEKLSIITAKAQTTRHRILGIVNEEDYQIVFSDTPGIIKPA 67 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 ++ F+K E +L+++V E+ ++ + ++ L +I ++ L Sbjct: 68 YELQSSMMDFVKSAFEDADILIYMVEVGEKELKNE--------AFFHRILHSEIPVILL- 118 Query: 280 QIDTVDSDTLARKKNELATQCGQVP----FEFSSITGHGIPQILECLHD 324 ++ +D + + ++ +VP F S++ +P + + + + Sbjct: 119 -LNKIDKSSQEEVEEKIEYWRDKVPNADVFVISALEKFNVPAVFDKIKE 166 >gi|329947103|ref|ZP_08294479.1| GTP-binding protein HflX [Actinomyces sp. oral taxon 170 str. F0386] gi|328526280|gb|EGF53297.1| GTP-binding protein HflX [Actinomyces sp. oral taxon 170 str. F0386] Length = 520 Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 10/163 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 I + I G NAGKS+ + +T A + D F TL P + EG + + L D G Sbjct: 296 IPSVAIAGYTNAGKSSLMNRLTEAGIMVEDALFATLDPTVRRAETSEG-RTYTLTDTVGF 354 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 ++N H+ L+ ++LH+V A + + + LS L E+ Sbjct: 355 VRNLPHELIEAFRSTLEEVAGADLVLHVVDAAHPDPLSQVAAVRTVLSEIPDALDVP-EL 413 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 + L++ D D+ TLA + L S+ TG GI ++ Sbjct: 414 IVLNKTDLADAVTLAALRTRLPGSVA-----VSARTGEGIEEL 451 >gi|322411296|gb|EFY02204.1| GTP-binding protein Era [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 261 Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 7 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHKPK 66 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 67 ---TALGDFMVESAYSTLREVETVLFMVPA-DEKRGKGDDMIIERLKAAKIPV-----IL 117 Query: 277 GLSQIDTVDSDTLARKKNELATQC---GQVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S + G+ +P +++ L D + Sbjct: 118 VINKIDKVHPDQLLAQIDDFRSQMEFKEVVP--ISGLEGNNVPTLIKLLTDNL 168 >gi|311105366|ref|YP_003978219.1| GTP-binding proten HflX [Achromobacter xylosoxidans A8] gi|310760055|gb|ADP15504.1| GTP-binding proten HflX [Achromobacter xylosoxidans A8] Length = 368 Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G NAGKST ++TRA AD F TL I EG +++D G I++ Sbjct: 192 VSLVGYTNAGKSTLFNALTRADSYAADQLFATLDTTTRRIWIEGAGSVVVSDTVGFIRDL 251 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSA 246 G R L+ T +LLH+V A Sbjct: 252 PHGLIAAFRATLEETVHADLLLHVVDA 278 >gi|309791632|ref|ZP_07686125.1| translation-associated GTPase [Oscillochloris trichoides DG6] gi|308226350|gb|EFO80085.1| translation-associated GTPase [Oscillochloris trichoides DG6] Length = 360 Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 + IIGL N+GK+T ++TR+ + A + + PNL +V K Sbjct: 3 LAIIGLANSGKTTVFNALTRSTAETAAFSSGQMEPNLAMVKVPDQRLEVLAQMFKPRKVT 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y + D+ GI QG G+ L + L+H+V A + Sbjct: 63 YADVQYVDVAGISGGERQGGGLPPALLNYLGTADALVHVVRAFAD 107 >gi|293604548|ref|ZP_06686953.1| GTP-binding protein HflX [Achromobacter piechaudii ATCC 43553] gi|292817129|gb|EFF76205.1| GTP-binding protein HflX [Achromobacter piechaudii ATCC 43553] Length = 368 Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G NAGKST ++TRA AD F TL I EG +++D G I++ Sbjct: 192 VSLVGYTNAGKSTLFNALTRADSYAADQLFATLDTTTRRIWIEGAGSVVVSDTVGFIRDL 251 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSA 246 G R L+ T +LLH+V A Sbjct: 252 PHGLIAAFRATLEETVHADLLLHVVDA 278 >gi|289427265|ref|ZP_06428981.1| GTP-binding protein HflX [Propionibacterium acnes J165] gi|289159734|gb|EFD07922.1| GTP-binding protein HflX [Propionibacterium acnes J165] gi|332675421|gb|AEE72237.1| GTP-binding protein HflX [Propionibacterium acnes 266] Length = 483 Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 11/167 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I+G NAGKS+ L +TRA + + F TL P +G + + L D G Sbjct: 262 VPSVAIVGYTNAGKSSLLNRLTRAGVLVENALFATLDPTTRRATTSDG-RVYTLTDTVGF 320 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 +++ H L+ T VLLH+V A + + + LS + EI Sbjct: 321 VRHLPHDLVEAFASTLEETAMADVLLHVVDADDPDPLGQVDAVRGVLSGIGAS--NIPEI 378 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + L++ID + +T+ ++ + S+ TG GI +++E + Sbjct: 379 LVLNKIDRLSDETILTLRSTFPG-----AYLVSAHTGEGIDKLVEAI 420 >gi|66047177|ref|YP_237018.1| GTP-binding protein Era [Pseudomonas syringae pv. syringae B728a] gi|71738169|ref|YP_276083.1| GTP-binding protein Era [Pseudomonas syringae pv. phaseolicola 1448A] gi|289628145|ref|ZP_06461099.1| GTP-binding protein Era [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649889|ref|ZP_06481232.1| GTP-binding protein Era [Pseudomonas syringae pv. aesculi str. 2250] gi|289676657|ref|ZP_06497547.1| GTP-binding protein Era [Pseudomonas syringae pv. syringae FF5] gi|81307971|sp|Q4ZPE2|ERA_PSEU2 RecName: Full=GTPase Era gi|123635348|sp|Q48EV4|ERA_PSE14 RecName: Full=GTPase Era gi|63257884|gb|AAY38980.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein Era [Pseudomonas syringae pv. syringae B728a] gi|71558722|gb|AAZ37933.1| GTP-binding protein Era [Pseudomonas syringae pv. phaseolicola 1448A] gi|320325569|gb|EFW81631.1| GTP-binding protein Era [Pseudomonas syringae pv. glycinea str. B076] gi|320327145|gb|EFW83159.1| GTP-binding protein Era [Pseudomonas syringae pv. glycinea str. race 4] gi|330871240|gb|EGH05949.1| GTPase Era [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330879243|gb|EGH13392.1| GTPase Era [Pseudomonas syringae pv. glycinea str. race 4] gi|330950055|gb|EGH50315.1| GTPase Era [Pseudomonas syringae Cit 7] gi|330973033|gb|EGH73099.1| GTPase Era [Pseudomonas syringae pv. aceris str. M302273PT] gi|330989031|gb|EGH87134.1| GTPase Era [Pseudomonas syringae pv. lachrymans str. M301315] Length = 300 Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ KN Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGAVQAIYVDTPGMHKNG 71 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 72 EKAL---NRYMNKT 82 >gi|260432757|ref|ZP_05786728.1| GTP-binding protein Era [Silicibacter lacuscaerulensis ITI-1157] gi|260416585|gb|EEX09844.1| GTP-binding protein Era [Silicibacter lacuscaerulensis ITI-1157] Length = 302 Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 7/168 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I +IG PNAGKST L + AK I + T + G+ EG + + D PG+ K Sbjct: 8 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGDAQLVFVDTPGLFKPR 67 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + + +++ +V A + + ILD LS +K+ + ++ Sbjct: 68 RRLDRAMVAAAWGGAADADIIVLMVEA-HRGITEGVERILDGLSEIAQG--RKVAL-AIN 123 Query: 280 QIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECLHDKI 326 +ID V++ L +L + F S+ TGHG+ + + L ++ Sbjct: 124 KIDRVEAPALLSLTRDLNDRFPFAETFMISAETGHGVEDLRKWLAQQL 171 >gi|257066944|ref|YP_003153200.1| ferrous iron transport protein B [Anaerococcus prevotii DSM 20548] gi|256798824|gb|ACV29479.1| ferrous iron transport protein B [Anaerococcus prevotii DSM 20548] Length = 716 Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 80/161 (49%), Gaps = 14/161 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN+GK+T ++T + ++ ++P T+ G++K G+K+ I+ D+PGI + Sbjct: 5 IALAGNPNSGKTTLFNALTGSNQRVGNWPGVTVDKKQGVLK-GHKDIIIEDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ER +++++V S L N+ Q + EL + ++ L Sbjct: 64 YTMEEVVSREYLVGERPDLIINLVDGSNLVRNLYLTSQLL---------ELNIPV-VIAL 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 + +D V S ++L+ + G E ++ G G+ +++ Sbjct: 114 NMMDIVRSRGDKIDVDKLSKKLGCPIVEIVAMKGQGVDKLI 154 >gi|331010047|gb|EGH90103.1| GTPase Era [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 300 Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ KN Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGAVQAIYVDTPGMHKNG 71 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 72 EKAL---NRYMNKT 82 >gi|330874711|gb|EGH08860.1| GTP-binding protein Der [Pseudomonas syringae pv. glycinea str. race 4] Length = 440 Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 11/166 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR + I D T G K + +IL D GI Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60 Query: 217 IKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + H + ++ L E V+L +V A +A Y D++ + R K Sbjct: 61 SGDEHGMDEKMAEQSLLAIEEADVVLFLVDA-----RAGYTA-ADQMIGEHLRKRNKRSY 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 V ++ID +D + LAR + +P + G GI Q+LE Sbjct: 115 VVANKIDNID-ENLARAEFSPMGLGDAIP--VAGAHGRGISQMLEI 157 >gi|221066040|ref|ZP_03542145.1| GTP-binding proten HflX [Comamonas testosteroni KF-1] gi|220711063|gb|EED66431.1| GTP-binding proten HflX [Comamonas testosteroni KF-1] Length = 387 Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 19/180 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL--YPNLGIVKEGYKEFILADIPGI 216 + +I ++G NAGKST ++ +A+ AD F TL + E + L+D G Sbjct: 188 VFNISLVGYTNAGKSTLFNAMVKARAYAADQLFATLDTTTRQMYLTEAEESVSLSDTVGF 247 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSEL 269 I++ G+ D F L+ +LLH+V A E +Q Q +L E+ A + Sbjct: 248 IRDLPH--GLVDAFQATLQEAIDADLLLHVVDASNPGFPEQIQQV-QKVLGEIGADDVP- 303 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCG-QVPFEF-SSITGHGIPQILECLHDKIF 327 +I+ +++D ++ + ++ G VP F S+ +G G+ Q+ + L D++ Sbjct: 304 ----QILVFNKLDAIEPERQPAVLQDMYELDGVPVPRVFVSARSGQGLAQLRQMLADRVL 359 >gi|148700335|gb|EDL32282.1| GTP binding protein 4, isoform CRA_a [Mus musculus] Length = 387 Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|50842504|ref|YP_055731.1| GTP-binding protein [Propionibacterium acnes KPA171202] gi|50840106|gb|AAT82773.1| GTP-binding protein [Propionibacterium acnes KPA171202] Length = 483 Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 11/167 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I+G NAGKS+ L +TRA + + F TL P +G + + L D G Sbjct: 262 VPSVAIVGYTNAGKSSLLNRLTRAGVLVENALFATLDPTTRRATTSDG-RVYTLTDTVGF 320 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 +++ H L+ T VLLH+V A + + + LS + EI Sbjct: 321 VRHLPHDLVEAFASTLEETAMADVLLHVVDADDPDPLGQVDAVRGVLSGIGAS--NIPEI 378 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + L++ID + +T+ ++ + S+ TG GI +++E + Sbjct: 379 LVLNKIDRLSDETILTLRSTFPG-----AYLVSAHTGEGIDKLVEAI 420 >gi|26991571|ref|NP_746996.1| GTP-binding protein HflX [Pseudomonas putida KT2440] gi|148549971|ref|YP_001270073.1| HSR1-related GTP-binding protein [Pseudomonas putida F1] gi|24986658|gb|AAN70460.1|AE016687_7 GTP-binding protein HflX [Pseudomonas putida KT2440] gi|148514029|gb|ABQ80889.1| GTP-binding protein, HSR1-related [Pseudomonas putida F1] Length = 433 Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T ++ AD F TL P L ++ +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNALTESEVYAADQLFATLDPTLRRLELNDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ + + +LLH++ A E + +L L +E Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDAHEPERMEQIEQVLAVLGEIGAE 309 >gi|291569077|dbj|BAI91349.1| ferrous iron transport protein B [Arthrospira platensis NIES-39] Length = 789 Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust. Identities = 41/176 (23%), Positives = 80/176 (45%), Gaps = 19/176 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI-- 216 ++ I ++G PN GK+T ++T + ++ ++P T+ G + + + D+PG+ Sbjct: 17 VSCIALVGNPNCGKTTLFNALTGSNQRVGNWPGVTVERKEGSYRYQNQTIKVIDLPGVYS 76 Query: 217 --IKNAHQGAG--IGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELR 270 +++A G + +L E T ++++IV A LE N+ Q + E+ Sbjct: 77 LDVEDASTGLDEQVARDYLLSGEAT-LIINIVDASNLERNLYLTTQLL---------EMG 126 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I I L+ ID + +L + G S+ +G G+ Q+ E + D I Sbjct: 127 LPIAI-ALNMIDIAKQRQITIDAQQLGDRLGCPVIPMSASSGRGVEQLREIVRDAI 181 >gi|284050339|ref|ZP_06380549.1| ferrous iron transport protein B [Arthrospira platensis str. Paraca] Length = 785 Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust. Identities = 41/176 (23%), Positives = 80/176 (45%), Gaps = 19/176 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI-- 216 ++ I ++G PN GK+T ++T + ++ ++P T+ G + + + D+PG+ Sbjct: 13 VSCIALVGNPNCGKTTLFNALTGSNQRVGNWPGVTVERKEGSYRYQNQTIKVIDLPGVYS 72 Query: 217 --IKNAHQGAG--IGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELR 270 +++A G + +L E T ++++IV A LE N+ Q + E+ Sbjct: 73 LDVEDASTGLDEQVARDYLLSGEAT-LIINIVDASNLERNLYLTTQLL---------EMG 122 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I I L+ ID + +L + G S+ +G G+ Q+ E + D I Sbjct: 123 LPIAI-ALNMIDIAKQRQITIDAQQLGDRLGCPVIPMSASSGRGVEQLREIVRDAI 177 >gi|282854031|ref|ZP_06263368.1| GTP-binding protein HflX [Propionibacterium acnes J139] gi|282583484|gb|EFB88864.1| GTP-binding protein HflX [Propionibacterium acnes J139] Length = 483 Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I+G NAGKS+ L +TRA + + F TL P +G + + L D G Sbjct: 262 VPSVAIVGYTNAGKSSLLNRLTRAGVLVENALFATLDPTTRRATTSDG-RVYTLTDTVGF 320 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 +++ H L+ T VLLH+V A + + + LS + EI Sbjct: 321 VRHLPHDLVEAFASTLEETAMADVLLHVVDADDPDPLGQVDAVRGVLSGIGAS--NIPEI 378 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 + L++ID + +T+ ++ + S+ TG G +++E + D Sbjct: 379 LVLNKIDRLSDETILTLRSTFPG-----AYLVSAHTGEGTDKLVEAIED 422 >gi|213971118|ref|ZP_03399237.1| GTP-binding protein Era [Pseudomonas syringae pv. tomato T1] gi|301381865|ref|ZP_07230283.1| GTP-binding protein Era [Pseudomonas syringae pv. tomato Max13] gi|302063245|ref|ZP_07254786.1| GTP-binding protein Era [Pseudomonas syringae pv. tomato K40] gi|213924107|gb|EEB57683.1| GTP-binding protein Era [Pseudomonas syringae pv. tomato T1] gi|330877434|gb|EGH11583.1| GTPase Era [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330964519|gb|EGH64779.1| GTPase Era [Pseudomonas syringae pv. actinidiae str. M302091] gi|331015602|gb|EGH95658.1| GTPase Era [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 300 Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ KN Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGAVQAIYVDTPGMHKNG 71 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 72 EKAL---NRYMNKT 82 >gi|167035934|ref|YP_001671165.1| GTP-binding proten HflX [Pseudomonas putida GB-1] gi|166862422|gb|ABZ00830.1| GTP-binding proten HflX [Pseudomonas putida GB-1] gi|313500872|gb|ADR62238.1| HflX [Pseudomonas putida BIRD-1] Length = 433 Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T ++ AD F TL P L ++ +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNALTESEVYAADQLFATLDPTLRRLELNDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ + + +LLH++ A E + +L L +E Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDAHEPERMEQIEQVLAVLGEIGAE 309 >gi|323143788|ref|ZP_08078456.1| ribosome biogenesis GTPase Der [Succinatimonas hippei YIT 12066] gi|322416501|gb|EFY07167.1| ribosome biogenesis GTPase Der [Succinatimonas hippei YIT 12066] Length = 568 Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 11/131 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +T+ + +AD+P T G +E+I+ D GI K+A Sbjct: 4 VALVGCPNVGKSTLFNRLTKTRDALVADFPGLTRDRKYGRALFDGREYIVIDTGGIAKDA 63 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 Q + + + + E ++L +V A + YQ ++ Y + KK +V Sbjct: 64 EQPSDLTSKMTEQALLAIEECDLVLFMVDARAGIMPGDYQ-----VAEYIRKSGKKCAVV 118 Query: 277 GLSQIDTVDSD 287 ++ID +D D Sbjct: 119 A-NKIDGLDPD 128 >gi|255077553|ref|XP_002502413.1| predicted protein [Micromonas sp. RCC299] gi|226517678|gb|ACO63671.1| predicted protein [Micromonas sp. RCC299] Length = 250 Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 34/59 (57%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKS+ + +++ K +I +YPFTT +G + I+ D PG+I A Sbjct: 130 VALVGAPNVGKSSLVQALSSGKSEINNYPFTTKGIKMGHFFVETERHIVTDTPGLINRA 188 >gi|50310051|ref|XP_455039.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|52783185|sp|Q6CM00|NOG1_KLULA RecName: Full=Nucleolar GTP-binding protein 1 gi|49644174|emb|CAH00126.1| KLLA0E24135p [Kluyveromyces lactis] Length = 643 Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust. Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 15/182 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+FL +T+A ++ Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLRCITKADVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDRPTDE 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + + + H+ S + + + QC I ++ ++S K +V Sbjct: 232 MNNVE-----MQSIYAIAHLRSTVMYFMDLSEQCGFSIEAQVKLFHSIKPLFANKSVMVV 286 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLH---DKIFSIRGEN 333 +++ D + + L ++ +L +VP E + + H ++ + +K+ + R EN Sbjct: 287 INKTDIIKPEDLDEERKKLLDTVLEVPGVEIMTTSCHEEDNVMAVRNKACEKLLASRIEN 346 Query: 334 EF 335 + Sbjct: 347 KL 348 >gi|330898516|gb|EGH29935.1| GTPase Era [Pseudomonas syringae pv. japonica str. M301072PT] Length = 300 Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ KN Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGAVQAIYVDTPGMHKNG 71 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 72 EKAL---NRYMNKT 82 >gi|162454229|ref|YP_001616596.1| GTP-binding protein [Sorangium cellulosum 'So ce 56'] gi|161164811|emb|CAN96116.1| GTP-binding protein [Sorangium cellulosum 'So ce 56'] Length = 598 Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust. Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 28/178 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I IIG PNAGKS+ + + + + D P TT P + + K F+L D GI + + Sbjct: 336 IAIIGRPNAGKSSLVNRIAGEERMLVDATPGTTRDPIDTLAERDGKRFLLIDTAGIRRKS 395 Query: 221 HQGAGIGDRFLKHTERTHV--LLHIVSALEENVQAAYQCILDELSAYNSELRKKI----- 273 + K ++H + A+E +A +L + + +E KI Sbjct: 396 --------KVAKEDSAVEAVSVIHAIRAME---RAEVVLLLCDAAEGVAEQDAKILGLAV 444 Query: 274 -----EIVGLSQIDTVDSDTLARKKNELATQCGQVPF----EFSSITGHGIPQILECL 322 ++GL++ID +D LA+ + + + VP+ S+ +G G+ +++E + Sbjct: 445 DRGCGVVIGLNKIDLLDRKALAKAEQDARDKLSFVPWAPIAHVSARSGRGVAKLIETV 502 >gi|147791371|emb|CAN65615.1| hypothetical protein VITISV_024726 [Vitis vinifera] Length = 674 Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA + Y FTT +G Y + + D PGI+ Sbjct: 171 ILICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPF 230 Query: 222 QGAGI 226 + I Sbjct: 231 EDRNI 235 >gi|298674508|ref|YP_003726258.1| GTP-binding protein HflX [Methanohalobium evestigatum Z-7303] gi|298287496|gb|ADI73462.1| GTP-binding protein HflX [Methanohalobium evestigatum Z-7303] Length = 418 Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 11/170 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + + G NAGKST ++ ++ D FTTL P + G + +L D G I++ Sbjct: 193 VALAGYTNAGKSTLFNTIVDEDVRVEDMLFTTLSPVTRSLNLGGRHVLLTDTVGFIEDLP 252 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE----IV 276 H L T V+L +V E+ + I +L+ + L K E I Sbjct: 253 HWMIDAFRSTLDEIFLTDVILLVVDVAEDA-----EKIRKKLATSHEILWNKSEGAPIIT 307 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L+++D + SD L +K +++ P S+ +G+G+ + + ++ ++ Sbjct: 308 VLNKVDAIKSDELNKKLDKIEYLAPN-PVFISAKSGYGLDNLKKQINQQV 356 >gi|258591961|emb|CBE68266.1| putative GTPase [NC10 bacterium 'Dutch sediment'] Length = 389 Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 27/180 (15%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGI 216 I + ++G NAGKST ++T + + D F TL P L V +G+ F+L+D G Sbjct: 205 IPIVALVGYTNAGKSTLFNALTHSGVQTDDALFVTLDPILRRVTMADGFG-FLLSDTVGF 263 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 I+ Q L+ + +LLH++ A++ ++++ A ++ LR+ Sbjct: 264 IRRLPEQLVTAFKATLEELDEADLLLHVID-------ASHPQVMEQKEAVDTILRE---- 312 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQ--------VP-FEFSSITGHGIPQILECLHDKI 326 +GLS V+ + K + L GQ VP S++TG+G+ ++L+ + + + Sbjct: 313 LGLSTKPIVE---VFNKMDRLTGGIGQSFIGGKTIVPRVAISALTGYGLDRLLQTVRESL 369 >gi|222152667|ref|YP_002561842.1| GTP-binding protein Era [Streptococcus uberis 0140J] gi|254783667|sp|B9DRF9|ERA_STRU0 RecName: Full=GTPase Era gi|222113478|emb|CAR41209.1| GTP-binding protein Era homolog [Streptococcus uberis 0140J] Length = 299 Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPK 67 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L + I+ Sbjct: 68 ---TALGDFMVESAYSTLREVDTVLFMVPA-DEKRGKGDDMIMERLKNAKIPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ +P ++ L D + Sbjct: 119 VINKIDKVHPDQLLEQIDDFRSQMDFKEVVP--ISALQGNNVPTLISLLTDNL 169 >gi|167769258|ref|ZP_02441311.1| hypothetical protein ANACOL_00581 [Anaerotruncus colihominis DSM 17241] gi|167668898|gb|EDS13028.1| hypothetical protein ANACOL_00581 [Anaerotruncus colihominis DSM 17241] Length = 719 Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 14/163 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T +T + + ++P T+ G ++ G K+ I+ D+PGI + Sbjct: 5 IALAGNPNCGKTTMFNDLTGSSQYVGNWPGVTVEKKEGKLR-GQKDVIITDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ER V++++V A +E N+ Q +E+ + ++ L Sbjct: 64 YTLEEVVTRNYIMDERPDVVVNLVDASNIERNLYLTTQL---------TEMGIPV-LIAL 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 + +D V + +L+ Q G E S++ G G+ + +C Sbjct: 114 NMMDIVKKNGDRIDTKKLSEQLGCEIIETSAVKGEGLKALADC 156 >gi|311031640|ref|ZP_07709730.1| GTP-binding protein Era [Bacillus sp. m3-13] Length = 305 Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 25/174 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D P TT G+ + + + D PGI K Sbjct: 14 VSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVFTQDDAQIVFIDTPGIHKPK 73 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++L +++A +E + + I+++L ++ + + Sbjct: 74 HK---LGDFMMKVAQNTLKEVDLVLFMINA-KEGLGKGDEFIIEKLKETSTPV-----YL 124 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHDKI 326 +++ID V D L + T PF+ S++ G+ + E L D+I Sbjct: 125 VINKIDEVHPDDLLPL---METYKALYPFKEIVPISALQGNNV----EVLLDQI 171 >gi|225376265|ref|ZP_03753486.1| hypothetical protein ROSEINA2194_01903 [Roseburia inulinivorans DSM 16841] gi|225211911|gb|EEG94265.1| hypothetical protein ROSEINA2194_01903 [Roseburia inulinivorans DSM 16841] Length = 732 Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 81/169 (47%), Gaps = 14/169 (8%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIP 214 +L + I + G PN GK+T ++T + + ++P T+ G +K G+K+ ++ D+P Sbjct: 12 ELIMAVKIALAGNPNCGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLK-GHKDVVIMDLP 70 Query: 215 GIIK-NAHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRK 271 GI + + + R ER +L+IV + +E N+ + Q + EL Sbjct: 71 GIYSLSPYTLEEVVARNYLIAERPDAILNIVDGTNIERNLYLSTQLM---------ELGI 121 Query: 272 KIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + I+ ++ +D V+ ++L+ + G E S++ G GI + E Sbjct: 122 PV-IMAVNMMDVVEKSGEKIHTDKLSKKLGCEVVEISALKGTGIKEAAE 169 >gi|331222755|ref|XP_003324051.1| nucleolar GTP-binding protein 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309303041|gb|EFP79632.1| nucleolar GTP-binding protein 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 702 Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 30/54 (55%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ Sbjct: 173 ICGYPNVGKSSFMNKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVIDTPGIL 226 >gi|317495247|ref|ZP_07953617.1| GTP-binding protein Era [Gemella moribillum M424] gi|316914669|gb|EFV36145.1| GTP-binding protein Era [Gemella moribillum M424] Length = 302 Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust. Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 32/157 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PNAGKST L ++ + K I +D P TT G+ + + + D PGI K Sbjct: 11 VTIIGRPNAGKSTLLNNILKQKIAIMSDKPQTTRNIINGVYTDQDSQIVFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLK-------HTERTHVLL-----------HIVSALEENVQAAYQCI---- 258 H+ +GD +K +E ++++ H+++ ++E + I Sbjct: 71 HR---LGDYMMKLASSAIQESEIVYLIINAGEKFGPGDQHLINIVKELNVPTFLLINKID 127 Query: 259 ------LDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 L E+ ++ +L +EIV +S + +++ D L Sbjct: 128 LISPEKLIEIISFYKDLYDFVEIVPISALKSINVDNL 164 >gi|225463737|ref|XP_002265178.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 676 Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA + Y FTT +G Y + + D PGI+ Sbjct: 171 ILICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPF 230 Query: 222 QGAGI 226 + I Sbjct: 231 EDRNI 235 >gi|77460818|ref|YP_350325.1| GTP-binding protein EngA [Pseudomonas fluorescens Pf0-1] gi|123603396|sp|Q3K7C0|DER_PSEPF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|77384821|gb|ABA76334.1| GTP-binding protein [Pseudomonas fluorescens Pf0-1] Length = 490 Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 11/166 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR + I D T G K + +IL D GI Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60 Query: 217 IKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + H + ++ L E V+L +V A + AA Q I + L N K+ + Sbjct: 61 SGDEHGMDEKMAEQSLLAIEEADVVLFLVDA-KAGFTAADQMIAEHLRKRN----KRSHV 115 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 V +++D +D + +AR + +P + G GI Q+LE Sbjct: 116 VA-NKVDNIDPE-MARAEFAPLGMGHAIP--IAGAHGRGITQLLEA 157 >gi|51090740|dbj|BAD35220.1| putative nucleolar GTP-binding protein [Oryza sativa Japonica Group] gi|125596352|gb|EAZ36132.1| hypothetical protein OsJ_20441 [Oryza sativa Japonica Group] Length = 676 Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 31/63 (49%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+F+ +TRA + Y FTT +G Y + + D PGI+ + Sbjct: 173 ICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHADYKYLRYQVIDTPGILDRPFED 232 Query: 224 AGI 226 I Sbjct: 233 RNI 235 >gi|302132833|ref|ZP_07258823.1| GTP-binding protein Era [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 300 Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ KN Sbjct: 12 VSIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGAVQAIYVDTPGMHKNG 71 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 72 EKAL---NRYMNKT 82 >gi|284048360|ref|YP_003398699.1| GTP-binding proten HflX [Acidaminococcus fermentans DSM 20731] gi|283952581|gb|ADB47384.1| GTP-binding proten HflX [Acidaminococcus fermentans DSM 20731] Length = 604 Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 16/170 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST L ++T + D F TL P + L D G I Sbjct: 383 VKQVCLVGYTNAGKSTLLNTLTHSDIYAQDQLFATLDPTTRQLDLPDGSSCTLTDTVGFI 442 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 + HQ L+ + +LLH+V + E +A YQ +L EL + + Sbjct: 443 QRLPHQLVAAFKSTLEVVKDADLLLHVVDSSHELAREQTEAVYQ-VLQELGVTDKPI--- 498 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + +++D + R++ E S+ TG G+P++LE L Sbjct: 499 --LTVYNKVDRLSQHEGLRRRLEQEDNA----LCISARTGEGVPELLETL 542 >gi|262402852|ref|ZP_06079413.1| GTP-binding protein EngA [Vibrio sp. RC586] gi|262351634|gb|EEZ00767.1| GTP-binding protein EngA [Vibrio sp. RC586] Length = 494 Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 10/133 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G K G EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I + +G + + L + V+L +V A + DE A + +K Sbjct: 60 IDGSEEGVETKMAQQSLAAIDEADVVLFMVDG------RAGLTVADEAIAQHLRRIEKPA 113 Query: 275 IVGLSQIDTVDSD 287 I+ ++++D +D+D Sbjct: 114 ILVVNKVDGIDAD 126 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT +K +E++L D G+ + Sbjct: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRK 267 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + L+ E +V+L +V A EN+ +L A NS + ++ Sbjct: 268 RINETVEKFSVVKTLQAIEDANVVLLVVDA-RENISDQDLSLLG--FALNS---GRSIVI 321 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D + D K EL + G V F S++ G G+ + E + + Sbjct: 322 AVNKWDGLSIDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 373 >gi|260771392|ref|ZP_05880317.1| GTP-binding protein EngA [Vibrio furnissii CIP 102972] gi|260613518|gb|EEX38712.1| GTP-binding protein EngA [Vibrio furnissii CIP 102972] gi|315180972|gb|ADT87886.1| GTP-binding protein [Vibrio furnissii NCTC 11218] Length = 495 Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 209 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRRRK 268 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK E +V+L +V A E + L+A S ++ Sbjct: 269 RINETVEKFSVVKTLKAIEDANVVLLVVDARENISDQDLSLLGFALNAGRS------IVI 322 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D+D R K EL + G V F S++ G G+ + E + + Sbjct: 323 AVNKWDGLDTDVKERVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 374 Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 10/134 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G K G EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I + +G + + L + V+L +V A + DE A + +K Sbjct: 60 IDGSEEGVETKMAAQSLAAIDEADVVLFMVDG------RAGLTVADEAIANHLRRVEKNA 113 Query: 275 IVGLSQIDTVDSDT 288 I+ ++++D +D++T Sbjct: 114 ILVVNKVDGIDAET 127 >gi|329942586|ref|ZP_08291396.1| GTP-binding proten HflX [Chlamydophila psittaci Cal10] gi|332287216|ref|YP_004422117.1| GTP-binding protein [Chlamydophila psittaci 6BC] gi|313847810|emb|CBY16801.1| putative GTP-binding protein [Chlamydophila psittaci RD1] gi|325506512|gb|ADZ18150.1| GTP-binding protein [Chlamydophila psittaci 6BC] gi|328815496|gb|EGF85484.1| GTP-binding proten HflX [Chlamydophila psittaci Cal10] gi|328914464|gb|AEB55297.1| GTP-binding protein HflX [Chlamydophila psittaci 6BC] Length = 462 Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 16/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFILADIPGI 216 I +IG N+GKST L +T A+ + D F TL P ++ G + + + I Sbjct: 227 IPSFALIGYTNSGKSTLLNLLTSAETYVEDKLFATLDPKTRRCVLPSGQRVLVTDTVGFI 286 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 K H L+ VLLH+V A E+++ + IL EL + ++ Sbjct: 287 RKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPLAFEHIETTKE-ILKELGVDHPKI--- 342 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I L++ID + + K L+ + + S+ TG GI +LE + D I Sbjct: 343 --ITVLNKIDALPHGKASTKLRLLSPRAVLI----SAKTGEGIQNLLEAMTDVI 390 >gi|172036243|ref|YP_001802744.1| GTP-binding protein [Cyanothece sp. ATCC 51142] gi|171697697|gb|ACB50678.1| GTP-binding protein [Cyanothece sp. ATCC 51142] Length = 530 Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 23/151 (15%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL----GI---VKEGYKEFILA 211 + I I+G NAGKST + ++T A+ AD F TL P G+ ++ Y F+L Sbjct: 354 VPTIAIVGYTNAGKSTLINALTNAEVYTADQLFATLDPTTRRLSGVDSDTQQPYT-FLLT 412 Query: 212 DIPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVS----ALEENVQAAYQCILDELSA 264 D G I + D F L+ LLH+V A + ++Q+ IL E+ Sbjct: 413 DTVGFIHEL--PPSLVDAFRATLEEVTEADALLHLVDLSHPAWQHHIQSVM-TILQEMPL 469 Query: 265 YNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 + ++ ++IDTVD +TL + E Sbjct: 470 VPGPI-----LLVFNKIDTVDGETLRIAQEE 495 >gi|45201290|ref|NP_986860.1| AGR194Wp [Ashbya gossypii ATCC 10895] gi|52783195|sp|Q74ZK6|NOG1_ASHGO RecName: Full=Nucleolar GTP-binding protein 1 gi|44986144|gb|AAS54684.1| AGR194Wp [Ashbya gossypii ATCC 10895] Length = 642 Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL +T+A ++ Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLRCITKADVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGIL 225 >gi|308807425|ref|XP_003081023.1| Predicted GTP-binding protein (ODN superfamily) (ISS) [Ostreococcus tauri] gi|116059485|emb|CAL55192.1| Predicted GTP-binding protein (ODN superfamily) (ISS) [Ostreococcus tauri] Length = 386 Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust. Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 19/101 (18%) Query: 168 PNAGKSTFLASVTRAKPKIA--DYPFTTLYPN---LGIVKEGYKEF-------------- 208 P +GKS+ +TR + ++PF T+ PN + E Y Sbjct: 13 PTSGKSSLFNLLTRQSIPVGAENFPFCTIEPNEARCAVPDERYDYLCNMWKPPSMYPAFL 72 Query: 209 ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 ++ DI G+++ A GAG+G+ FL + T + H++ A ++ Sbjct: 73 MVTDIAGLVRGASSGAGLGNAFLSNIMATDGIFHVIRAFDD 113 >gi|226357377|ref|YP_002787117.1| GTP-binding protein EngA [Deinococcus deserti VCD115] gi|259645869|sp|C1D094|DER_DEIDV RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|226319367|gb|ACO47363.1| putative GTP-binding protein [Deinococcus deserti VCD115] Length = 441 Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 23/177 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKN 219 I +IG PN GKS+ L ++T + +AD P TT +L + + G + F+L D GI K Sbjct: 175 ISLIGRPNVGKSSLLNAITNTDRAIVADQPGTT-RDSLDVEWDFGGQRFVLVDTAGIRKK 233 Query: 220 AHQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 I D ++ + +R+ ++ +V+A + ++ L L AY S K I Sbjct: 234 P--DTAIEDYAIQRSQAAIQRSDLIWLVVNATD---MGDHELKLANL-AYES---GKPVI 284 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILE---CLHDK 325 V +++ D V + L R + +L + + F S+I +GI ++L LHDK Sbjct: 285 VVVNKWDLVPDEELKRTEKDLNQKLHHISFAPRVYTSAINDYGIHEMLAEAMKLHDK 341 >gi|2109448|gb|AAC45339.1| ORFY [Streptococcus pneumoniae] Length = 37 Score = 43.1 bits (100), Expect = 0.058, Method: Composition-based stats. Identities = 17/32 (53%), Positives = 24/32 (75%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTL 194 GI+GLPN GKST ++T+A + A+YPF T+ Sbjct: 6 GIVGLPNVGKSTLFNAITKAGAEAANYPFATI 37 >gi|22093651|dbj|BAC06946.1| putative GTP binding protein [Oryza sativa Japonica Group] Length = 676 Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 31/63 (49%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+F+ +TRA + Y FTT +G Y + + D PGI+ + Sbjct: 173 ICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHADYKYLRYQVIDTPGILDRPFED 232 Query: 224 AGI 226 I Sbjct: 233 RNI 235 >gi|269103271|ref|ZP_06155968.1| GTP-binding protein EngA [Photobacterium damselae subsp. damselae CIP 102761] gi|268163169|gb|EEZ41665.1| GTP-binding protein EngA [Photobacterium damselae subsp. damselae CIP 102761] Length = 499 Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 21/173 (12%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IK 218 + IIG PN GKST + + + D P TT ++ +E++L D GI K Sbjct: 213 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGQEYVLIDTAGIRRRK 272 Query: 219 NAHQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 N H+ ++F LK E +V+L I+ A E + L+A S Sbjct: 273 NMHEAV---EKFSVIQTLKAVEDANVVLLIIDARENISDQDLSLLGFALNAGRS------ 323 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECL 322 ++ +++ D +D+D R K EL + G V F S++ G G+ + E + Sbjct: 324 LVIAVNKWDGLDNDVKERVKTELDRRLGFVDFARIHFISALHGTGVGHLYESV 376 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 10/134 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEINEHEFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L +V + AA + I L + R K Sbjct: 60 IDGTEEGVETKMAEQSLMAIEEADVVLFLVDG-RAGLTAADEAIAKHLRS-----RNKPT 113 Query: 275 IVGLSQIDTVDSDT 288 + +++ID +D+D+ Sbjct: 114 FLVVNKIDGIDADS 127 >gi|320582038|gb|EFW96257.1| nucleolar GTP-binding protein 1 [Pichia angusta DL-1] Length = 635 Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL +T+A ++ Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLKCITKADVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGIL 225 >gi|254572802|ref|XP_002493510.1| Putative GTPase that associates with free 60S ribosomal subunits in the nucleolus [Pichia pastoris GS115] gi|238033309|emb|CAY71331.1| Putative GTPase that associates with free 60S ribosomal subunits in the nucleolus [Pichia pastoris GS115] gi|328354665|emb|CCA41062.1| Probable nucleolar GTP-binding protein 1 [Pichia pastoris CBS 7435] Length = 635 Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL +T+A ++ Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLRCITKADVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGIL 225 >gi|237798714|ref|ZP_04587175.1| GTPase Era [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806147|ref|ZP_04592851.1| GTPase Era [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021567|gb|EGI01624.1| GTPase Era [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027260|gb|EGI07315.1| GTPase Era [Pseudomonas syringae pv. oryzae str. 1_6] Length = 300 Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ KN Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGAVQAIYVDTPGMHKNG 71 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 72 EKAL---NRYMNKT 82 >gi|209527666|ref|ZP_03276164.1| ferrous iron transport protein B [Arthrospira maxima CS-328] gi|209491894|gb|EDZ92251.1| ferrous iron transport protein B [Arthrospira maxima CS-328] Length = 785 Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 19/174 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI----I 217 I ++G PN GK+T ++T + ++ ++P T+ G + + + D+PG+ + Sbjct: 16 IALVGNPNCGKTTLFNALTGSNQRVGNWPGVTVERKEGSYRYQNQAIKVIDLPGVYSLDV 75 Query: 218 KNAHQGAG--IGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKI 273 ++A G + +L E T ++++IV A LE N+ Q + E+ I Sbjct: 76 EDASTGLDEQVARDYLLSGEAT-LIINIVDASNLERNLYLTTQLL---------EMGLPI 125 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 I L+ ID + +L + G S+ +G G+ Q+ E + D I Sbjct: 126 AI-ALNMIDIAQQRQITIDAQQLGDRLGCPVIPMSASSGRGVEQLREIVRDAIL 178 >gi|118589883|ref|ZP_01547287.1| GTP binding protein-like [Stappia aggregata IAM 12614] gi|118437380|gb|EAV44017.1| GTP binding protein-like [Stappia aggregata IAM 12614] Length = 426 Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 14/179 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST +T + D F TL P L V + KE IL+D G I + Sbjct: 202 VALVGYTNAGKSTLFNRMTESDVFAKDLLFATLDPTLRKVALPHGKEIILSDTVGFISDL 261 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 H A L+ ++LH+ + +A + + L+ + I+ + Sbjct: 262 PTHLVAAFR-ATLEEVLEADLILHVRDISHPDTEAQAEDVKKTLTDLGVDALTGAPIIEV 320 Query: 279 -SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL------HDKIFSIR 330 ++ID +D A ++ L + P S++TG GI Q+ + HD I +++ Sbjct: 321 WNKIDCLDP---AYREKLLEDAGDEGPIALSALTGEGIEQLYTRVDTFMAQHDDILTVK 376 >gi|332019264|gb|EGI59773.1| GTP-binding protein [Acromyrmex echinatior] Length = 118 Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 26/36 (72%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN 197 +GI+G+PN GKSTF +T+++ ++PF T+ PN Sbjct: 74 MGIVGIPNVGKSTFFNVLTKSQAAAENFPFCTIDPN 109 >gi|229916327|ref|YP_002884973.1| GTP-binding protein Era [Exiguobacterium sp. AT1b] gi|229467756|gb|ACQ69528.1| GTP-binding protein Era [Exiguobacterium sp. AT1b] Length = 302 Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 19/166 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D P TT G+ + I D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVYTTDDSQIIFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLK----HTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K +L +V+ E A I+++L ++ + I+ Sbjct: 71 HR---LGDFMMKVATNALREVDAILFMVNVTEPR-GAGDDFIIEKLKGLDTPI-----IL 121 Query: 277 GLSQIDTVDSDTLARKKNELATQ---CGQVPFEFSSITGHGIPQIL 319 +++ID + D L + + + VP S++ G+ + +L Sbjct: 122 VMNKIDLIHPDELPKVIEQYTNELDFAAYVP--ISALQGNNVEPLL 165 >gi|188586871|ref|YP_001918416.1| GTP-binding proten HflX [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351558|gb|ACB85828.1| GTP-binding proten HflX [Natranaerobius thermophilus JW/NM-WN-LF] Length = 435 Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 2/109 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII-KN 219 + ++G NAGKST L+++T +K D F TL P L + + +L+D G I K Sbjct: 210 VSLVGYTNAGKSTLLSTLTGSKVTAKDELFNTLDPKLADMSMSSGSKALLSDTVGFINKL 269 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 H L+ E ++LH++ A + + + + LS+ + E Sbjct: 270 PHHLVAAFRATLEEVEEADLILHVIDASSPRMYEEIEAVEEVLSSLDLE 318 >gi|149197046|ref|ZP_01874099.1| GTP-binding protein Era [Lentisphaera araneosa HTCC2155] gi|149140156|gb|EDM28556.1| GTP-binding protein Era [Lentisphaera araneosa HTCC2155] Length = 301 Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 16/97 (16%) Query: 162 IGIIGLPNAGKSTF--------LASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADI 213 + I+G PNAGKSTF LA+V+R P TT +GI + + I +D Sbjct: 13 VAIVGRPNAGKSTFVNQALGYKLAAVSRV-------PHTTRRRWVGIFTDDDAQIIFSDT 65 Query: 214 PGIIKNAHQGAGIGDRFLKHT-ERTHVLLHIVSALEE 249 PGI ++ ++ + DR +K ++ + L + + E Sbjct: 66 PGIHESKNRMDEMMDRTIKRAIDKNDITLLLCDPMRE 102 >gi|330937656|gb|EGH41561.1| GTPase Era [Pseudomonas syringae pv. pisi str. 1704B] Length = 291 Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ KN Sbjct: 3 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGAVQAIYVDTPGMHKNG 62 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 63 EKAL---NRYMNKT 73 >gi|327440936|dbj|BAK17301.1| GTPase [Solibacillus silvestris StLB046] Length = 304 Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 14/135 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D P TT G++ + + I D PGI K Sbjct: 12 VSIVGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTQQNSQTIFIDTPGIHKPK 71 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +G+ LK + V++ +V+A E+ + + I++ L + + + Sbjct: 72 HK---LGEFMLKTSRNALREVDVIMFMVNA-EQAIGKGDEFIIELLQGNKTPV-----FL 122 Query: 277 GLSQIDTVDSDTLAR 291 +++ID V D L + Sbjct: 123 IINKIDLVHPDELVK 137 >gi|307609736|emb|CBW99247.1| hypothetical protein LPW_10281 [Legionella pneumophila 130b] Length = 295 Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 6/75 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST L + + K I P TT + LGI E +F+ D PGI Sbjct: 8 IALVGRPNVGKSTLLNRILQQKLSITSRKPQTTRHSILGIRTEDEFQFVYVDTPGI---- 63 Query: 221 HQG-AGIGDRFLKHT 234 HQG A +R + T Sbjct: 64 HQGNAKAINRMMNKT 78 >gi|330982652|gb|EGH80755.1| GTPase Era [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 245 Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ KN Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGAVQAIYVDTPGMHKN- 70 Query: 221 HQGAGIGDRFLKHT 234 G +R++ T Sbjct: 71 --GEKALNRYMNKT 82 >gi|238783097|ref|ZP_04627123.1| Ferrous iron transport protein B [Yersinia bercovieri ATCC 43970] gi|238715893|gb|EEQ07879.1| Ferrous iron transport protein B [Yersinia bercovieri ATCC 43970] Length = 771 Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 17/164 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 IG+IG PNAGK+T +T A+ ++ ++ T+ G + L D+PG + Sbjct: 6 IGLIGNPNAGKTTLFNQLTGARQRVGNWAGVTVERKEGHFTTPQHQVTLVDLPGTYSLTT 65 Query: 220 AHQGAGIGDRFLKH---TERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + + ++ H + +L++++ A LE N+ Q + EL Sbjct: 66 ISEQTSLDEQIACHYILSGEADLLINVIDAANLERNLYLTLQLV---------ELGIPC- 115 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 IV L+ +D S + N L+ Q G S GHGI ++ Sbjct: 116 IVALNMLDIAKSQHIEIDINALSQQLGCPVIPLVSTRGHGINEL 159 >gi|330807651|ref|YP_004352113.1| GTP-binding protein engA [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375759|gb|AEA67109.1| GTP-binding protein engA [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 490 Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 11/166 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR + I D T G K + +IL D GI Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRTYILVDTGGI 60 Query: 217 IKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + H + ++ L E V+L +V A + AA Q I + L R K Sbjct: 61 SGDEHGMDEKMAEQSLLAIEEADVVLFLVDA-KAGFTAADQMIAEHLRK-----RNKRSY 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 V +++D +D D +AR + +P + G GI Q+L+ Sbjct: 115 VVANKVDNIDPD-MARAEFAPLGMGQAIP--IAGAHGRGITQMLKI 157 >gi|296444864|ref|ZP_06886826.1| GTP-binding protein Era [Methylosinus trichosporium OB3b] gi|296257532|gb|EFH04597.1| GTP-binding protein Era [Methylosinus trichosporium OB3b] Length = 312 Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 29/174 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI---- 216 + ++G PNAGKST L + AK I TT GI G + IL D PGI Sbjct: 22 VALVGAPNAGKSTLLNQLVGAKVSIVSRKAQTTRALVRGIAISGESQIILVDTPGIFAPK 81 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 + +A GAG D + +L+ L+ V+ L+ELSA Sbjct: 82 RRLERAMVASALSGAGDADAVV-------LLIDARRGLDAEVEEII-AKLNELSAP---- 129 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECL 322 +I+ L+++D V ++L + Q + S++ G G+P +L L Sbjct: 130 ----KILVLNKVDVVPRESLLGLTAAVTRQADFAETYMISALNGDGVPDLLAKL 179 >gi|255715543|ref|XP_002554053.1| KLTH0E13244p [Lachancea thermotolerans] gi|238935435|emb|CAR23616.1| KLTH0E13244p [Lachancea thermotolerans] Length = 647 Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL +T+A ++ Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLRCITKADVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGIL 225 >gi|225435458|ref|XP_002285463.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 676 Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA + Y FTT +G Y + + D PGI+ Sbjct: 171 ILICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPF 230 Query: 222 QGAGI 226 + I Sbjct: 231 EDRNI 235 >gi|255544896|ref|XP_002513509.1| nucleolar GTP-binding protein, putative [Ricinus communis] gi|223547417|gb|EEF48912.1| nucleolar GTP-binding protein, putative [Ricinus communis] Length = 678 Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA + Y FTT +G Y + + D PGI+ Sbjct: 171 ILICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPF 230 Query: 222 QGAGI 226 + I Sbjct: 231 EDRNI 235 >gi|86606241|ref|YP_475004.1| GTP-binding protein [Synechococcus sp. JA-3-3Ab] gi|86554783|gb|ABC99741.1| GTP-binding protein [Synechococcus sp. JA-3-3Ab] Length = 588 Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 5/109 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST L ++T+A+ +AD F TL P ++ G + +L D G + Sbjct: 410 IPVVALVGYTNAGKSTLLNALTQAQVYVADQLFATLDPTTRRLELPGQQAVLLTDTVGFL 469 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDEL 262 Q L+ LLH+V N + A + +LDE+ Sbjct: 470 TELPEQLVEAFQATLEEVTEADALLHVVDLSHPNWEGHIEAVETLLDEM 518 >gi|327311734|ref|YP_004338631.1| small GTP-binding protein [Thermoproteus uzoniensis 768-20] gi|326948213|gb|AEA13319.1| small GTP-binding protein [Thermoproteus uzoniensis 768-20] Length = 344 Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 34/56 (60%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + + G PN GKS+ + ++ AKPK+A+YPFTT ++G + + D PG++ Sbjct: 167 VVVAGAPNVGKSSLVGCLSTAKPKVAEYPFTTRQIHVGHIFVRGDRIQVIDTPGLL 222 >gi|296106525|ref|YP_003618225.1| GTP-binding protein Era [Legionella pneumophila 2300/99 Alcoy] gi|295648426|gb|ADG24273.1| GTP-binding protein Era [Legionella pneumophila 2300/99 Alcoy] Length = 295 Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 6/75 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST L + + K I P TT + LGI E +F+ D PGI Sbjct: 8 IALVGRPNVGKSTLLNRILQQKLSITSRKPQTTRHSILGIRTEDEFQFVYVDTPGI---- 63 Query: 221 HQG-AGIGDRFLKHT 234 HQG A +R + T Sbjct: 64 HQGNAKAINRMMNKT 78 >gi|146308511|ref|YP_001188976.1| GTP-binding protein EngA [Pseudomonas mendocina ymp] gi|166225842|sp|A4XY28|DER_PSEMY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|145576712|gb|ABP86244.1| small GTP-binding protein [Pseudomonas mendocina ymp] Length = 492 Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 11/167 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR++ I D T G K + +I+ D GI Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRSRDAIVGDLSGLTRDRQYGEAKWQGRTYIVIDTGGI 60 Query: 217 IKNAHQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + A + ++ L+ E +L +V A + A+ Q I + L R K Sbjct: 61 SGDEEGIDAKMAEQSLQAIEEADAVLFLVDA-RAGMTASDQMIGEHLRR-----RNKRSF 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + ++++D +D D LAR E + P + G GI Q+LE + Sbjct: 115 LVVNKVDNLDVD-LARA--EFSPMGLGEPLAIAGAHGRGITQMLEAV 158 >gi|53802988|ref|YP_115285.1| GTPase family protein [Methylococcus capsulatus str. Bath] gi|81823578|sp|Q603B5|DER_METCA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|53756749|gb|AAU91040.1| GTPase family protein [Methylococcus capsulatus str. Bath] Length = 463 Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 9/114 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + +IG N GKST +TR + +AD+P T G V+ G +++ + D GI Sbjct: 1 MLPVVALIGRTNVGKSTLFNYLTRTRDALVADFPGLTRDRQYGRVQRGERDYFVVDTGGI 60 Query: 217 IKNAHQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYN 266 I+ A GI D+ +K + V+L +V + + A + I D L N Sbjct: 61 IEAAE---GIDDQAMKQVDHVLDEADVILFLVD-VHAGMTAGDELIADRLRRIN 110 >gi|90424140|ref|YP_532510.1| GTP-binding protein Era [Rhodopseudomonas palustris BisB18] gi|90106154|gb|ABD88191.1| GTP-binding protein Era [Rhodopseudomonas palustris BisB18] Length = 320 Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 37/182 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGI---- 216 + +IG PN GKST + ++ +K I T + GIV E + + IL D PGI Sbjct: 30 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEDHAQIILVDTPGIFLPK 89 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 +K A GA D VLL ++E A IL +LS N Sbjct: 90 RRLDRAMVKTAWSGAHDADLVC-------VLLDAREGIDEEADA----ILTKLSQVNHP- 137 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQV-----PFEFSSITGHGIPQILECLHD 324 +I+ ++++D V + L + LA + F S+++G G+ + + L Sbjct: 138 ----KILVINKVDIVSKEKLLK----LAQSANERLKFDETFMVSALSGDGVEDLRKSLAS 189 Query: 325 KI 326 K+ Sbjct: 190 KV 191 >gi|239504133|ref|ZP_04663443.1| GTPase [Acinetobacter baumannii AB900] Length = 444 Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 9/115 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST + ++ AD F TL P L ++ +G +LAD G + Sbjct: 199 IPTVSLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLADTVGFV 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 +N H L+ T +LLH++ + + +LD++ A S L++ Sbjct: 259 RNLQHDLVESFKATLEETLEATLLLHVIDSSSHD-------MLDQIEAVESVLKE 306 >gi|325271234|ref|ZP_08137779.1| GTP-binding protein HflX [Pseudomonas sp. TJI-51] gi|324103637|gb|EGC00939.1| GTP-binding protein HflX [Pseudomonas sp. TJI-51] Length = 433 Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T ++ AD F TL P L ++ +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNALTESEVYAADQLFATLDPTLRRLELNDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ + + +LLH++ A E + +L L +E Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDAHEPERMEQIEQVLAVLGEIGAE 309 >gi|302342696|ref|YP_003807225.1| ferrous iron transport protein B [Desulfarculus baarsii DSM 2075] gi|301639309|gb|ADK84631.1| ferrous iron transport protein B [Desulfarculus baarsii DSM 2075] Length = 713 Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 13/163 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 + + G PN+GK++ ++T A+ + +YP T+ G V+ G + + D+PG A Sbjct: 9 VALAGNPNSGKTSMFNALTGARQHVGNYPGVTVEKKWGQVRHGQQTIEVVDLPGTYSLTA 68 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R +R V++ +V A LE N+ A Q + EL + ++ L Sbjct: 69 YSLEEVVARNFIIQQRPDVIIDVVDAANLERNLYLAVQFM---------ELGAPL-VIAL 118 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 + ID ++ L +L+ G + G G+ ++L+ Sbjct: 119 NMIDVAEARGLQIDVAKLSQLLGVPVVPTVARGGKGMKELLDA 161 >gi|222636315|gb|EEE66447.1| hypothetical protein OsJ_22832 [Oryza sativa Japonica Group] Length = 652 Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 31/63 (49%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+F+ +TRA + Y FTT +G Y + + D PGI+ + Sbjct: 173 ICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHADYKYLRYQVIDTPGILDRPFED 232 Query: 224 AGI 226 I Sbjct: 233 RNI 235 >gi|62184900|ref|YP_219685.1| putative GTP-binding protein [Chlamydophila abortus S26/3] gi|62147967|emb|CAH63715.1| putative GTP-binding protein [Chlamydophila abortus S26/3] Length = 462 Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 16/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 I +IG N+GKST L +T A+ + D F TL P ++ G + + + I Sbjct: 227 IPSFALIGYTNSGKSTLLNLLTSAETYVEDKLFATLDPKTRRCVLPSGQRVLVTDTVGFI 286 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 K H L+ VLLH+V A E+++ Q IL EL + ++ Sbjct: 287 RKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPLAFEHIETT-QEILKELGVDHPKI--- 342 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I L++ID + K L+ + + S+ TG GI +LE + D I Sbjct: 343 --ITVLNKIDELPEGKAPTKLRLLSPRAVVI----SAKTGEGIQNLLEAMTDII 390 >gi|332707443|ref|ZP_08427492.1| GTP-binding protein HflX [Lyngbya majuscula 3L] gi|332353794|gb|EGJ33285.1| GTP-binding protein HflX [Lyngbya majuscula 3L] Length = 542 Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 21/150 (14%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKE---GYKEFILAD 212 + + ++G NAGKST L ++T A+ AD F TL P L I+ +L D Sbjct: 368 VPTVAVVGYTNAGKSTLLNTLTNAEVYTADQLFATLDPTTRRLPIIDSVTGKSSAMLLID 427 Query: 213 IPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIV----SALEENVQAAYQCILDELSAY 265 G I + D F L+ LLH+V SA ++++ IL ++ Sbjct: 428 TVGFIHEL--PPPLVDSFRATLEEVTEADALLHLVDLSHSAWASHIRSVM-GILRDMPIT 484 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 + +V ++ID VDSDTLA K E Sbjct: 485 PGPI-----LVVFNKIDQVDSDTLALAKEE 509 >gi|291165709|gb|EFE27757.1| ferrous iron transport protein B [Filifactor alocis ATCC 35896] Length = 795 Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 14/159 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN+GK+T ++T + + ++P T+ G +K+ Y + + D+PGI + Sbjct: 5 IALAGNPNSGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLKK-YDDVKIMDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ER +L+IV + LE N+ Q + EL + +V + Sbjct: 64 YTLEEVVARNYLIQERPDAILNIVDGTNLERNLYLTTQLV---------ELGIPV-VVAI 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQ 317 + ID V + EL+ Q G E S++ G GI + Sbjct: 114 NMIDIVHKNGDVINTEELSRQLGCKVVEISALKGTGIQE 152 >gi|168018079|ref|XP_001761574.1| predicted protein [Physcomitrella patens subsp. patens] gi|162687258|gb|EDQ73642.1| predicted protein [Physcomitrella patens subsp. patens] Length = 681 Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I I G PN GKS+F+ +TRA + Y FTT +G Y + + D PGI+ Sbjct: 171 ILICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYMRWQVIDTPGIL 226 >gi|330982802|gb|EGH80905.1| GTPase Era [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 252 Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ KN Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGAVQAIYVDTPGMHKN- 70 Query: 221 HQGAGIGDRFLKHT 234 G +R++ T Sbjct: 71 --GEKALNRYMNKT 82 >gi|312115947|ref|YP_004013543.1| GTP-binding protein Era [Rhodomicrobium vannielii ATCC 17100] gi|311221076|gb|ADP72444.1| GTP-binding protein Era [Rhodomicrobium vannielii ATCC 17100] Length = 364 Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 7/155 (4%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNAH 221 +IG PNAGKST + ++ AK I + T + GI +G + +L D PGI Sbjct: 75 AVIGAPNAGKSTLVNALVGAKVSIVTHKAQTTRTRVRGIALDGEAQIVLVDTPGIFAPKR 134 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQI 281 + DR + T T V+ L + + +D + + L+ + I+ L+++ Sbjct: 135 R----LDRAMVETAWTEAREADVAVLVVDAARGFDDTVDPIVNEAANLKIPL-ILALNKV 189 Query: 282 DTVDSDTLARKKNELATQCG-QVPFEFSSITGHGI 315 D + + L E + + + F S+++G G+ Sbjct: 190 DKIHKEKLLALAGEASERLKLESLFMISALSGDGV 224 >gi|302855061|ref|XP_002959031.1| hypothetical protein VOLCADRAFT_108445 [Volvox carteri f. nagariensis] gi|300255597|gb|EFJ39892.1| hypothetical protein VOLCADRAFT_108445 [Volvox carteri f. nagariensis] Length = 548 Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 5/109 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I +GI G NAGKST L ++T A D F TL P ++ +G KE +++D G I Sbjct: 298 IPVVGICGYTNAGKSTLLNTLTNAGVLAEDQLFATLDPTTRRLRLKGNKEILMSDTVGFI 357 Query: 218 KNAHQGAGIGDR-FLKHTERTHVLLHIVSALEENV---QAAYQCILDEL 262 + R L+ ++LH+V N AA +L+EL Sbjct: 358 QKLPTELVAAFRATLEEIRDASIILHVVDISHPNAAAQNAAVMQVLEEL 406 >gi|224059572|ref|XP_002299913.1| predicted protein [Populus trichocarpa] gi|222847171|gb|EEE84718.1| predicted protein [Populus trichocarpa] Length = 629 Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + I G PN GKS+F+ +TRA + Y FTT +G Y + + D PGI+ Sbjct: 124 VLICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPF 183 Query: 222 QGAGI 226 + I Sbjct: 184 EDRNI 188 >gi|257486564|ref|ZP_05640605.1| GTP-binding protein Era [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 149 Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ KN Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGAVQAIYVDTPGMHKNG 71 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 72 EKAL---NRYMNKT 82 >gi|15613930|ref|NP_242233.1| Era/ThdF family GTP-binding protein [Bacillus halodurans C-125] gi|13959358|sp|Q9KD52|ERA_BACHD RecName: Full=GTPase Era gi|10173983|dbj|BAB05086.1| GTP-binding protein (Era/ThdF family) [Bacillus halodurans C-125] Length = 304 Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 72/170 (42%), Gaps = 27/170 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST L V K I +D P TT G+ + + D PGI K Sbjct: 13 VSIIGRPNVGKSTLLNHVIGQKIAIMSDKPQTTRNKIQGVYTSEDSQIVFIDTPGIHKPK 72 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++L++V E + I++ L + + I+ Sbjct: 73 HK---LGDFMMKVAQNTLKEVDLILYVVDG-AEAFGPGEEFIIERLKEAKTPV-----IL 123 Query: 277 GLSQIDTVDSDTLA------RKKNEL-------ATQCGQVPFEFSSITGH 313 +++ID V D L R K+E A Q VP IT H Sbjct: 124 VINKIDKVHPDDLLSLIETYRHKHEFEEVVPVSALQGNNVPTLLLEITKH 173 >gi|84515164|ref|ZP_01002527.1| GTP-binding protein Era [Loktanella vestfoldensis SKA53] gi|84511323|gb|EAQ07777.1| GTP-binding protein Era [Loktanella vestfoldensis SKA53] Length = 305 Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 17/173 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST L + AK I + T + G+ +G + I D PG+ K Sbjct: 11 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMDGQAQLIFIDTPGLFKPR 70 Query: 221 HQ--GAGIGDRFLKHTERTHVLLHIVS--ALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + A + + + V+L I + + E V+A + D + L Sbjct: 71 RRLDRAMVAAAWGGAADADVVVLMIEAHRGMSEGVKAILANLPDRMGKTKVAL------- 123 Query: 277 GLSQIDTVDSD---TLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ID V S+ L R NE A + F S+ GHG + + L D++ Sbjct: 124 AINKIDKVKSEGLLALTRDMNE-AFAFAET-FMISAERGHGCDALRKWLVDQV 174 >gi|240282042|gb|EER45545.1| nucleolar GTP-binding protein [Ajellomyces capsulatus H143] Length = 539 Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL ++T+A + Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLRNITKADVDVQPYAFTTKSLFVGHFDYKYLRFQAIDTPGIL 225 >gi|257791391|ref|YP_003181997.1| GTP-binding protein Era [Eggerthella lenta DSM 2243] gi|325831362|ref|ZP_08164616.1| ribosome biogenesis GTPase Era [Eggerthella sp. HGA1] gi|257475288|gb|ACV55608.1| GTP-binding protein Era [Eggerthella lenta DSM 2243] gi|325486616|gb|EGC89064.1| ribosome biogenesis GTPase Era [Eggerthella sp. HGA1] Length = 307 Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 15/165 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKN 219 + ++G PNAGKST + ++ K I T V +EG+ + IL D PG+ K Sbjct: 17 VTLVGRPNAGKSTLINAIMGKKIAITSNTAQTTRHRFRAVLTREGF-QLILVDTPGLHK- 74 Query: 220 AHQGAG--IGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 H G + LK E V+ +V A + V + + +L S+ +I+ Sbjct: 75 PHDALGEELNTSALKALEDVDVVAFLVDA-SKPVGTGDEWVAAQLKRARSK-----KILV 128 Query: 278 LSQIDTVDSDTLARKKNELATQCG--QVPFEFSSITGHGIPQILE 320 LS+ID VD + L R++ A Q G E SS TG + ++ Sbjct: 129 LSKIDLVDGEQLDRQRFA-AAQLGDWDAVVELSSQTGEHVQDFVD 172 >gi|77462221|ref|YP_351725.1| GTP-binding protein Era [Rhodobacter sphaeroides 2.4.1] gi|126461083|ref|YP_001042197.1| GTP-binding protein Era [Rhodobacter sphaeroides ATCC 17029] gi|332560102|ref|ZP_08414424.1| GTPase Era [Rhodobacter sphaeroides WS8N] gi|77386639|gb|ABA77824.1| GTP-binding protein, Era-like [Rhodobacter sphaeroides 2.4.1] gi|126102747|gb|ABN75425.1| GTP-binding protein Era [Rhodobacter sphaeroides ATCC 17029] gi|332277814|gb|EGJ23129.1| GTPase Era [Rhodobacter sphaeroides WS8N] Length = 304 Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 18/170 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 10 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGQAQIVFVDTPGLFRPR 69 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + V++ +V A L E QA + D + + + + Sbjct: 70 RRLDRAMVAAAWGGAADADVIVLLVEAHRGLTEGTQAIIDAMRDRIP------QGQTVAL 123 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECL 322 +++ID V ++ L EL G PF S+ GHG+ ++ L Sbjct: 124 AINKIDRVKAEVLLGLAQEL---NGAFPFAETFMISAEKGHGVEKLRRWL 170 >gi|325662184|ref|ZP_08150799.1| ferrous iron transporter B [Lachnospiraceae bacterium 4_1_37FAA] gi|331085979|ref|ZP_08335062.1| ferrous iron transporter B [Lachnospiraceae bacterium 9_1_43BFAA] gi|325471436|gb|EGC74657.1| ferrous iron transporter B [Lachnospiraceae bacterium 4_1_37FAA] gi|330406902|gb|EGG86407.1| ferrous iron transporter B [Lachnospiraceae bacterium 9_1_43BFAA] Length = 681 Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 23/133 (17%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-----KEFILADIPG 215 ++G IG PN GK+T + T A K+A++P T+ KEGY ++F L D+PG Sbjct: 6 NVGFIGNPNCGKTTLFNAFTGANLKVANWPGVTVEK-----KEGYTTYEGEQFKLVDLPG 60 Query: 216 IIK-NAHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKK 272 I ++ R ++ V++ +V S LE N+ Q I EL K Sbjct: 61 IYSLTSYTMEEKVSRECIMSDEIDVIVDVVDASCLERNLYLTLQLI---------ELGKP 111 Query: 273 IEIVGLSQIDTVD 285 + I+ L+ +D V+ Sbjct: 112 V-ILALNMMDIVE 123 >gi|299752419|ref|XP_002911755.1| GTP binding protein 4 [Coprinopsis cinerea okayama7#130] gi|298409824|gb|EFI28261.1| GTP binding protein 4 [Coprinopsis cinerea okayama7#130] Length = 672 Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 30/54 (55%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ Sbjct: 173 ICGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHLDYKYLRWQVIDTPGIL 226 >gi|168001559|ref|XP_001753482.1| predicted protein [Physcomitrella patens subsp. patens] gi|162695361|gb|EDQ81705.1| predicted protein [Physcomitrella patens subsp. patens] Length = 674 Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I I G PN GKS+F+ +TRA + Y FTT +G Y + + D PGI+ Sbjct: 171 ILICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYMRWQVIDTPGIL 226 >gi|197117975|ref|YP_002138402.1| ferrous iron transport protein B [Geobacter bemidjiensis Bem] gi|197087335|gb|ACH38606.1| ferrous iron transport protein B [Geobacter bemidjiensis Bem] Length = 663 Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 5/105 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + ++G PN GKS ++T A +++YP T++ + G +EF + D PG+ I Sbjct: 24 VALVGNPNVGKSVLFNALTGAYVTVSNYPGTSVEVSRGSTAINGEEFEIIDTPGMYSILP 83 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDEL 262 + + L TER H++LH++ A LE + Q I EL Sbjct: 84 ITEEERVAREIL-LTERPHLVLHVLDARNLERMLPMTLQLIEAEL 127 >gi|307942253|ref|ZP_07657604.1| GTP-binding protein HflX [Roseibium sp. TrichSKD4] gi|307774539|gb|EFO33749.1| GTP-binding protein HflX [Roseibium sp. TrichSKD4] Length = 463 Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust. Identities = 44/193 (22%), Positives = 83/193 (43%), Gaps = 42/193 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNA 220 + ++G NAGKST +T + D F TL P L ++ + +E IL+D G I + Sbjct: 237 VALVGYTNAGKSTLFNRMTESNVFAKDLLFATLDPTLRKIRLPHGREIILSDTVGFISDL 296 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE-----LRKKIEI 275 TH++ + LEE ++A + ++S +SE ++K + Sbjct: 297 P---------------THLVAAFRATLEEVLEADLILHVRDISHPDSEAQCEDVKKTLVD 341 Query: 276 VGL------------SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI----- 318 +G+ ++ID +D A ++ L + P S++TG G+ + Sbjct: 342 LGVDGSHAAPVIEVWNKIDALDP---AYREKLLEDAAEEGPVSLSALTGEGVTSLYGRID 398 Query: 319 -LECLHDKIFSIR 330 HD +F+++ Sbjct: 399 AFMAQHDDLFTVK 411 >gi|86134519|ref|ZP_01053101.1| GTP-binding protein Era [Polaribacter sp. MED152] gi|85821382|gb|EAQ42529.1| GTP-binding protein Era [Polaribacter sp. MED152] Length = 293 Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 12/153 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + ++ K I TT + LGIV + I +D PGIIK A Sbjct: 8 VNIIGNPNVGKSTLMNALVGEKLSIITPKAQTTRHRILGIVNHEEYQIIFSDTPGIIKPA 67 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 ++ F+K E VL+++V E L + +N + KI ++ L Sbjct: 68 YELQASMMDFVKSAFEDADVLIYMVEVGE--------TALKNEAFFNKIIHSKIPVILL- 118 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITG 312 ++ +D ++A +VP F + Sbjct: 119 -LNKIDKSNKEEVDEKIAYWREKVPNSFVYVIS 150 >gi|297172549|gb|ADI23519.1| GTPase [uncultured Gemmatimonadales bacterium HF0770_41L09] Length = 317 Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 9/165 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII--K 218 + ++G PNAGKST L + I T + + GI+ G + I D PG++ K Sbjct: 22 VTLVGRPNAGKSTLLNQLVGEHLSIVTPKAQTTWQRVTGILSVGTDQIIFLDTPGLLEAK 81 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + Q A +G E +L I S + N + I + LS ++ L + L Sbjct: 82 DMLQRAMLGAALEALAEADITILLIDSTTKPNSRETASTI-EALSETSAPL-----YIAL 135 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 +++D D + + + + + SS+TG G +LE L Sbjct: 136 NKVDIADEEAIRAWEAWADRELSGSVYRLSSLTGEGADALLEGLR 180 >gi|313897353|ref|ZP_07830896.1| ribosome biogenesis GTPase Era [Clostridium sp. HGF2] gi|312957723|gb|EFR39348.1| ribosome biogenesis GTPase Era [Clostridium sp. HGF2] Length = 299 Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I IIG PNAGKST L ++ + K I P TT GI+ +F+ D PGI K Sbjct: 8 ISIIGRPNAGKSTLLNAILQEKVAITTPKPQTTRNNISGILTREDAQFVFVDTPGIHKPK 67 Query: 221 HQ 222 H+ Sbjct: 68 HE 69 >gi|253701232|ref|YP_003022421.1| ferrous iron transporter B [Geobacter sp. M21] gi|251776082|gb|ACT18663.1| ferrous iron transport protein B [Geobacter sp. M21] Length = 663 Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 5/105 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + ++G PN GKS ++T A +++YP T++ + G +EF + D PG+ I Sbjct: 24 VALVGNPNVGKSVLFNALTGAYVTVSNYPGTSVEVSRGSTAINGEEFEIIDTPGMYSILP 83 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDEL 262 + + L TER H++LH++ A LE + Q I EL Sbjct: 84 ITEEERVAREIL-LTERPHLVLHVLDARNLERMLPMTLQLIEAEL 127 >gi|146422556|ref|XP_001487214.1| hypothetical protein PGUG_00591 [Meyerozyma guilliermondii ATCC 6260] gi|146388335|gb|EDK36493.1| hypothetical protein PGUG_00591 [Meyerozyma guilliermondii ATCC 6260] Length = 639 Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 28/54 (51%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL +T+A + Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLKCITKADVDVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGIL 225 >gi|154249877|ref|YP_001410702.1| GTP-binding protein HSR1-related [Fervidobacterium nodosum Rt17-B1] gi|154153813|gb|ABS61045.1| GTP-binding protein HSR1-related [Fervidobacterium nodosum Rt17-B1] Length = 376 Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 4/62 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 L ++ ++G+ N GKS+ L +T +K ++ YP TT +GIVK K + D PGII Sbjct: 163 LRGEMLVLGVTNVGKSSLLKKLTNSKVTVSPYPGTT----IGIVKHKLKNLKVYDTPGII 218 Query: 218 KN 219 N Sbjct: 219 VN 220 >gi|195481754|ref|XP_002101766.1| GE17809 [Drosophila yakuba] gi|194189290|gb|EDX02874.1| GE17809 [Drosophila yakuba] Length = 432 Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 25/36 (69%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN 197 IGI+G+PN GKSTF +T++ ++PF T+ PN Sbjct: 24 IGIVGVPNVGKSTFFNVLTQSAAPAENFPFCTIKPN 59 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + H+ A E+ +V+ + D L Sbjct: 124 VVDIAGLVKGAAEGQGLGNDFLSHISACDAIFHLCRAFEDPDVTHVEGEVDPVRD-LEII 182 Query: 266 NSELRKKIEIVGLSQIDTVD 285 + ELR K E L +D ++ Sbjct: 183 SEELRLKDEENLLKNLDKLE 202 >gi|330504675|ref|YP_004381544.1| GTP-binding protein EngA [Pseudomonas mendocina NK-01] gi|328918961|gb|AEB59792.1| GTP-binding protein EngA [Pseudomonas mendocina NK-01] Length = 492 Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 11/167 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR++ I D T G K + +I+ D GI Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRSRDAIVGDLSGLTRDRQYGEAKWQGRTYIVIDTGGI 60 Query: 217 IKNAHQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + A + ++ L+ E +L +V A + A+ Q I + L R K Sbjct: 61 SGDEEGIDAKMAEQSLQAIEEADAVLFLVDA-RAGMTASDQMIGEHLRR-----RNKQSF 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + ++++D +D D LAR E + P + G GI Q+LE + Sbjct: 115 LVVNKVDNLDVD-LARA--EFSPMGLGEPLAIAGAHGRGITQMLEVV 158 >gi|195023632|ref|XP_001985722.1| GH20928 [Drosophila grimshawi] gi|193901722|gb|EDW00589.1| GH20928 [Drosophila grimshawi] Length = 381 Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 26/173 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAK--PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 I +IG+PN GKSTF+ ++ K P A TT N I+ G + + D PG++ Sbjct: 68 IAVIGVPNVGKSTFINNIINHKVCPTSAKV-HTTRKANTAILTSGQTQLVFYDTPGLVTQ 126 Query: 220 AHQGAGIGDRFLKHTERTHVLLH--IVSALEE-----NVQAAYQCILDELSAY------- 265 ++ K R H + H I++ +++ + + +LD L AY Sbjct: 127 REIRKHHLEQSFKSAYR-HAIQHADIIAVMQDASNSWTRKELHPTVLDTLKAYAQLPSFL 185 Query: 266 --NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIP 316 N K + V L I T+ +DTL + K P E + G+P Sbjct: 186 ILNKIDALKSKRVLLDLIKTLTNDTLHKSKK------TATPSETPQLITKGLP 232 >gi|293376339|ref|ZP_06622576.1| GTP-binding protein Era [Turicibacter sanguinis PC909] gi|325843413|ref|ZP_08167971.1| ribosome biogenesis GTPase Era [Turicibacter sp. HGF1] gi|292645028|gb|EFF63101.1| GTP-binding protein Era [Turicibacter sanguinis PC909] gi|325489335|gb|EGC91709.1| ribosome biogenesis GTPase Era [Turicibacter sp. HGF1] Length = 302 Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 2/90 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D P TT G++ + + I D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNQVLGKKIAIMSDKPQTTRNKIQGVITDADSQTIFIDTPGIHKPK 70 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEE 249 H+ G + D + ++ +V+A E+ Sbjct: 71 HELGKFMTDLAIGTLNEVDAVMFMVNATEK 100 >gi|225466410|ref|XP_002277639.1| PREDICTED: hypothetical protein, partial [Vitis vinifera] Length = 571 Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA + Y FTT +G Y + + D PGI+ Sbjct: 66 ILICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPF 125 Query: 222 QGAGI 226 + I Sbjct: 126 EDRNI 130 >gi|254506757|ref|ZP_05118897.1| GTP-binding protein EngA [Vibrio parahaemolyticus 16] gi|219550338|gb|EED27323.1| GTP-binding protein EngA [Vibrio parahaemolyticus 16] Length = 494 Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 13/167 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G K G EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + + L + V+L +V + AA + I L +K Sbjct: 60 IDGTEEGVETKMAQQSLAAIDEADVVLFMVDG-RAGLTAADEAIAKHLRKL-----EKPS 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 ++ ++++D +D+D + + +L + ++ ++ G G+ ++E Sbjct: 114 MLVVNKVDGIDADAASAEFWQLGVENM---YQIAAAHGRGVTALIEL 157 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRT 267 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK E +V+L ++ A E + L+A S ++ Sbjct: 268 RINETVEKFSVVKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRS------IVI 321 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D D K EL + G V F S++ G G+ + E + + Sbjct: 322 AVNKWDGLDMDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 373 >gi|328793826|ref|XP_001121197.2| PREDICTED: tRNA modification GTPase GTPBP3, mitochondrial-like [Apis mellifera] Length = 488 Score = 42.7 bits (99), Expect = 0.075, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 9/145 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTL-YPNLGIVKEGYKEFILADIPGIIKN 219 + I+G PN GKS+FL +++ I P TT L I GY ILAD GI N Sbjct: 248 VAILGKPNVGKSSFLNLLSKKNAAIVTSLPGTTRDIIELTIDICGYP-MILADTAGIRNN 306 Query: 220 AHQGAGIG--DRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + +++++ ++ I+SA E NV+ + + L + + E+ KK ++ Sbjct: 307 PENEIEIEGIKKTKEYSKKADFIICIISA-ENNVKTSLEDFLKQYKNF-LEIDKKRVLLI 364 Query: 278 LSQIDTVDSDTLA--RKKNELATQC 300 L++ID + D + RK+N + C Sbjct: 365 LNKIDLIKEDEIESWRKQNVIPISC 389 >gi|296109241|ref|YP_003616190.1| small GTP-binding protein [Methanocaldococcus infernus ME] gi|295434055|gb|ADG13226.1| small GTP-binding protein [Methanocaldococcus infernus ME] Length = 339 Score = 42.7 bits (99), Expect = 0.075, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 4/62 (6%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 K + I I G PN GKST L +T A +I YPFTT N+G + +EF + D PG Sbjct: 165 FKELPTIVIAGYPNVGKSTLLKKLTGADVEINSYPFTTKGINVGYL----EEFQIIDTPG 220 Query: 216 II 217 ++ Sbjct: 221 LL 222 >gi|84489469|ref|YP_447701.1| GTPase [Methanosphaera stadtmanae DSM 3091] gi|84372788|gb|ABC57058.1| predicted GTPase [Methanosphaera stadtmanae DSM 3091] Length = 365 Score = 42.7 bits (99), Expect = 0.075, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 46/85 (54%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 ++G P+ GKST L +T A K+ Y FTTL GI++ + + DIPGIIK A +G Sbjct: 67 LLGFPSVGKSTILNYLTNANSKVGAYEFTTLDIVPGIMEYEDAKIQILDIPGIIKGASKG 126 Query: 224 AGIGDRFLKHTERTHVLLHIVSALE 248 G G L T +++ ++ + Sbjct: 127 KGKGREILSATRNADLIIMVLDVFQ 151 >gi|325972144|ref|YP_004248335.1| GTP-binding protein Era-like-protein [Spirochaeta sp. Buddy] gi|324027382|gb|ADY14141.1| GTP-binding protein Era-like-protein [Spirochaeta sp. Buddy] Length = 293 Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 2/89 (2%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI-I 217 A + IIG P+AGKST L ++ K I A P TT GI + + I D PG + Sbjct: 4 ATVAIIGRPSAGKSTLLNTICEMKVSITASTPQTTRNAIRGIYTDARGQLIFTDTPGFHL 63 Query: 218 KNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 + D LK E + +L+I+ + Sbjct: 64 SEKTLNKRLQDTALKSLEESDAVLYIIDS 92 >gi|258619961|ref|ZP_05715001.1| GTP-binding protein [Vibrio mimicus VM573] gi|258627193|ref|ZP_05721981.1| GTP-binding protein [Vibrio mimicus VM603] gi|262165075|ref|ZP_06032812.1| GTP-binding protein EngA [Vibrio mimicus VM223] gi|262172166|ref|ZP_06039844.1| GTP-binding protein EngA [Vibrio mimicus MB-451] gi|258580495|gb|EEW05456.1| GTP-binding protein [Vibrio mimicus VM603] gi|258587694|gb|EEW12403.1| GTP-binding protein [Vibrio mimicus VM573] gi|261893242|gb|EEY39228.1| GTP-binding protein EngA [Vibrio mimicus MB-451] gi|262024791|gb|EEY43459.1| GTP-binding protein EngA [Vibrio mimicus VM223] Length = 494 Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 10/133 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G K G EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I + +G + + L + V+L +V A + DE A + +K Sbjct: 60 IDGSEEGVETKMAQQSLAAIDEADVVLFMVDG------RAGLTVADEAIAQHLRRIEKPA 113 Query: 275 IVGLSQIDTVDSD 287 I+ ++++D +D+D Sbjct: 114 ILVVNKVDGIDAD 126 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT +K +E++L D G+ + Sbjct: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRK 267 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + L+ E +V+L +V A EN+ +L A NS + ++ Sbjct: 268 RINETVEKFSVVKTLQAIEDANVVLLVVDA-RENISDQDLSLLG--FALNS---GRSIVI 321 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +++D K EL + G V F S++ G G+ + E + + Sbjct: 322 AVNKWDGLNTDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 373 >gi|224826455|ref|ZP_03699557.1| GTP-binding proten HflX [Lutiella nitroferrum 2002] gi|224601556|gb|EEG07737.1| GTP-binding proten HflX [Lutiella nitroferrum 2002] Length = 378 Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 2/90 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGII 217 IA + I+G NAGKST ++T+AK AD F TL + + +++D G I Sbjct: 197 IASVSIVGYTNAGKSTLFNALTKAKSYAADQLFATLDTTSRKLYLNEQASIVVSDTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA 246 ++ H L+ T + +LLH+V + Sbjct: 257 RDLPHTLVAAFRATLEETVQADLLLHVVDS 286 >gi|222632589|gb|EEE64721.1| hypothetical protein OsJ_19577 [Oryza sativa Japonica Group] Length = 423 Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 43/103 (41%), Gaps = 13/103 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGII--- 217 + ++G PN GKST + + K I D P TT + LGI E + IL D PG+I Sbjct: 128 VAVLGKPNVGKSTLINQIVGQKLSIVTDKPQTTRHRILGICSEPEYQIILYDTPGVIKKE 187 Query: 218 ---------KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENV 251 KN G D L + + I LEE V Sbjct: 188 MHKLDTMMMKNVRSAVGSADCVLVVVDACKMPEKIDEILEEGV 230 >gi|125553352|gb|EAY99061.1| hypothetical protein OsI_21018 [Oryza sativa Indica Group] Length = 423 Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 43/103 (41%), Gaps = 13/103 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGII--- 217 + ++G PN GKST + + K I D P TT + LGI E + IL D PG+I Sbjct: 128 VAVLGKPNVGKSTLINQIVGQKLSIVTDKPQTTRHRILGICSEPEYQIILYDTPGVIKKE 187 Query: 218 ---------KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENV 251 KN G D L + + I LEE V Sbjct: 188 MHKLDTMMMKNVRSAVGSADCVLVVVDACKMPEKIDEILEEGV 230 >gi|110802214|ref|YP_698293.1| ferrous iron transport protein B [Clostridium perfringens SM101] gi|110682715|gb|ABG86085.1| ferrous iron transport protein B [Clostridium perfringens SM101] Length = 669 Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 14/168 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK++ +T+++ I ++P T+ G +K + + + D+PG A Sbjct: 4 IALAGNPNCGKTSLFNLLTKSRQHIGNWPGVTVEKKEGTLKFKGESYKVIDLPGTYSLGA 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + I R ++ V++++V A LE N+ Q I E+ + ++ L Sbjct: 64 YSEDEIVARNYILKDKPDVVINVVDATNLERNLYLTTQLI---------EMGANV-VIAL 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC-LHDK 325 + ID +S + N+L+ + G + S+ GI +++E +H K Sbjct: 114 NMIDQAESLNIEIDTNKLSKRLGVPIIKTSAFKNRGIEELIETSIHSK 161 >gi|326504644|dbj|BAK06613.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 303 Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 13/103 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGII--- 217 + ++G PN GKST + + K I D P TT + LGI E + IL D PG+I Sbjct: 105 VAVLGKPNVGKSTLINQIVGQKLSIVTDKPQTTRHRILGICSEPEYQIILYDTPGVIKKE 164 Query: 218 ---------KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENV 251 KN G D + + + V I LEE V Sbjct: 165 MHKLDSMMMKNVQSAIGNADCVIVVADASKVPEKIDDMLEEGV 207 >gi|90410877|ref|ZP_01218891.1| GTP-binding protein EngA [Photobacterium profundum 3TCK] gi|90328090|gb|EAS44401.1| GTP-binding protein EngA [Photobacterium profundum 3TCK] Length = 493 Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 10/134 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEEHEFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L +V A + DE A + R+K Sbjct: 60 IDGTEEGVETKMAEQSLAAIEEADVVLFLVDG------RAGLTVSDEAIAKHLRSREKPT 113 Query: 275 IVGLSQIDTVDSDT 288 + +++ID +D+D+ Sbjct: 114 FLVVNKIDGIDADS 127 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 17/171 (9%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 207 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGQEYVLIDTAGVRRRK 266 Query: 221 HQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + + ++F LK E +V+L I+ A EN+ +L + L + Sbjct: 267 NMNQAV-EKFSVIQTLKAVEDANVVLLIIDA-RENISDQDLSLLGFVLNSGRSL-----V 319 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECL 322 + +++ D +D++ R K+EL + G + F S++ G G+ + + + Sbjct: 320 LAVNKWDGLDNEVKERVKSELDRRLGFIDFARIHFISALHGTGVGHLYDSV 370 >gi|114562298|ref|YP_749811.1| GTP-binding protein EngA [Shewanella frigidimarina NCIMB 400] gi|122300418|sp|Q085U2|DER_SHEFN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|114333591|gb|ABI70973.1| small GTP-binding protein [Shewanella frigidimarina NCIMB 400] Length = 488 Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLAGYEFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I + +G + ++ L E V+L + A + AA I L + R K+ Sbjct: 60 IDGSEEGIETKMAEQSLAAIEEADVVLFMTDA-RAGMTAADLAIAQHLRS-----RDKVT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V +++D +D+D+ + L G+V ++ ++ G G+ +++ Sbjct: 114 FVVANKVDGIDADSACGEFWSLG--LGEV-YQMAAAQGRGVTNMID 156 Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 23/176 (13%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTT---LYPNLGIVKEGYKEFILADIPGII 217 + IIG PN GKST + + + + D P TT +Y + + +EG +E++L D G+ Sbjct: 202 LAIIGKPNVGKSTLINRILGEERVVVYDEPGTTRDSIY--IPMSREG-REYVLIDTAGVR 258 Query: 218 KNAHQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 + + I ++F LK E +V+L ++ A E + + L+A + Sbjct: 259 RRSKVNEVI-EKFSVIKTLKAVEDANVVLLVIDAREGIAEQDLGLLGFTLNA------GR 311 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 ++ +++ D +D R K+EL + G + F S++ G G+ + E + + Sbjct: 312 ALVIAINKWDGIDQKVKDRVKSELDRRLGFIDFARIHFISALHGTGVGHLYESIEE 367 >gi|320157270|ref|YP_004189649.1| GTP-binding protein EngA [Vibrio vulnificus MO6-24/O] gi|319932582|gb|ADV87446.1| GTP-binding protein EngA [Vibrio vulnificus MO6-24/O] Length = 496 Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 81/173 (46%), Gaps = 13/173 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR++ +AD+P T G K G +FI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I + +G + ++ L V+L +V +A + ++A+ ++ K Sbjct: 60 IDGSEEGVETKMAEQSLAAIREADVVLFMVDG-----RAGLTPSDEAIAAHLRKIEKATM 114 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 +V ++++D +D+D + +L ++ ++ G G+ ++E D F Sbjct: 115 LV-VNKVDGIDADAASADFWQLGVDEM---YQIAAAHGRGVTALIERALDPFF 163 Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 210 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRG 269 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK E +V+L ++ A E + L+A S ++ Sbjct: 270 KVHETVEKFSVVKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRS------IVL 323 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D++ K EL + G V F S++ G G+ + E + + Sbjct: 324 AVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 375 >gi|319763707|ref|YP_004127644.1| gtp-binding proten hflx [Alicycliphilus denitrificans BC] gi|330824030|ref|YP_004387333.1| GTP-binding proten HflX [Alicycliphilus denitrificans K601] gi|317118268|gb|ADV00757.1| GTP-binding proten HflX [Alicycliphilus denitrificans BC] gi|329309402|gb|AEB83817.1| GTP-binding proten HflX [Alicycliphilus denitrificans K601] Length = 392 Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 19/173 (10%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFILADIPGIIK 218 +I ++G NAGKST ++ +A+ AD F TL + E L+D G I+ Sbjct: 203 NISLVGYTNAGKSTLFNALVKARAYAADQLFATLDTTTRQLYLGEAVGSVSLSDTVGFIR 262 Query: 219 NAHQGAGIGDRF---LKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRK 271 + G+ D F L+ +LLH+V A E + A Q +L E+ A Sbjct: 263 DLPH--GLVDAFQATLQEAVDADLLLHVVDAANPGYPEQI-AQVQLVLAEIGAAEIP--- 316 Query: 272 KIEIVGLSQIDTVDSDTL-ARKKNELATQCGQVPFEF-SSITGHGIPQILECL 322 +++ ++ D + ++T AR ++ QVP F S+ G GIP + E L Sbjct: 317 --QLLVFNKFDAMPAETRPARLQDMYELDGRQVPRIFVSARQGEGIPALRELL 367 >gi|224104135|ref|XP_002313333.1| predicted protein [Populus trichocarpa] gi|222849741|gb|EEE87288.1| predicted protein [Populus trichocarpa] Length = 650 Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + I G PN GKS+F+ +TRA + Y FTT +G Y + + D PGI+ Sbjct: 171 VLICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPF 230 Query: 222 QGAGI 226 + I Sbjct: 231 EDRNI 235 >gi|154253315|ref|YP_001414139.1| GTP-binding protein Era [Parvibaculum lavamentivorans DS-1] gi|154157265|gb|ABS64482.1| GTP-binding protein Era [Parvibaculum lavamentivorans DS-1] Length = 318 Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 + IIG PNAGKST L + +K I + T + GI EG + + D PGI K Sbjct: 28 VAIIGAPNAGKSTLLNQLVGSKVAIVTHKVQTTRSRIRGIAMEGNTQIVFVDTPGIFK 85 >gi|161486654|ref|NP_933563.2| GTP-binding protein EngA [Vibrio vulnificus YJ016] gi|41016999|sp|Q7MNE7|DER_VIBVY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA Length = 496 Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 81/173 (46%), Gaps = 13/173 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR++ +AD+P T G K G +FI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I + +G + ++ L V+L +V +A + ++A+ ++ K Sbjct: 60 IDGSEEGVETKMAEQSLAAIREADVVLFMVDG-----RAGLTPSDEAIAAHLRKIEKATM 114 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 +V ++++D +D+D + +L ++ ++ G G+ ++E D F Sbjct: 115 LV-VNKVDGIDADAASADFWQLGVDEM---YQIAAAHGRGVTALIERALDPFF 163 Score = 35.8 bits (81), Expect = 9.9, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 210 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRG 269 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK E +V+L ++ A E + L+A S ++ Sbjct: 270 KVHETVEKFSVVKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRS------IVL 323 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D++ K EL + G V F S++ G G+ + E + + Sbjct: 324 AVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 375 >gi|262304293|gb|ACY44739.1| GTP-binding protein [Skogsbergia lerneri] Length = 279 Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 5/69 (7%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + L H+ A E++ ++ + D L Sbjct: 35 VVDIAGLVKGASEGQGLGNAFLSHIKACDALFHVTRAFEDDDITHIEGEVNPVRD-LEII 93 Query: 266 NSELRKKIE 274 N ELRKK E Sbjct: 94 NEELRKKDE 102 >gi|163839487|ref|YP_001623892.1| GTP-binding protein [Renibacterium salmoninarum ATCC 33209] gi|162952963|gb|ABY22478.1| GTP-binding protein [Renibacterium salmoninarum ATCC 33209] Length = 526 Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 11/167 (6%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGIIKN- 219 I G NAGKS+ L +T A + + F TL P + +G F LAD G +++ Sbjct: 308 AIAGYTNAGKSSILNRLTHAGVLVQNALFATLDPTVRKAATPDGIG-FTLADTVGFVRSL 366 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 Q L+ ++LH+V + + + + LS ++ RK EI+ L+ Sbjct: 367 PTQLVEAFRSTLEEVADADLILHVVDVSHPDPEGQIAAVREVLSEVDA--RKIPEIIVLN 424 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + D D + R TQ S+ TG GI ++LE + I Sbjct: 425 KADAADPLVIQR-----LTQRETRSVLVSARTGQGIDELLELISQAI 466 >gi|163942540|ref|YP_001647424.1| ferrous iron transport protein B [Bacillus weihenstephanensis KBAB4] gi|163864737|gb|ABY45796.1| ferrous iron transport protein B [Bacillus weihenstephanensis KBAB4] Length = 662 Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 17/168 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 4 VALLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--KQGTLIDLPGVYDLNP 61 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + G+ FL T+ H +L+IV S E N+ Q + E K + I G Sbjct: 62 VSRDEGVVTNFLL-TDEFHHMLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-G 110 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDK 325 L+ ID + L+ G + TG G ++L LH++ Sbjct: 111 LNMIDVAKQRGIVINVKRLSEILGVTVVPVIARTGKGCEELLTTLHEE 158 >gi|15640782|ref|NP_230412.1| GTP-binding protein EngA [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121585667|ref|ZP_01675462.1| GTP-binding protein [Vibrio cholerae 2740-80] gi|121726039|ref|ZP_01679338.1| GTP-binding protein [Vibrio cholerae V52] gi|147675115|ref|YP_001216248.1| GTP-binding protein EngA [Vibrio cholerae O395] gi|153817276|ref|ZP_01969943.1| GTP-binding protein [Vibrio cholerae NCTC 8457] gi|153821375|ref|ZP_01974042.1| GTP-binding protein [Vibrio cholerae B33] gi|227080942|ref|YP_002809493.1| GTP-binding protein [Vibrio cholerae M66-2] gi|229505623|ref|ZP_04395133.1| GTP-binding protein EngA [Vibrio cholerae BX 330286] gi|229510705|ref|ZP_04400184.1| GTP-binding protein EngA [Vibrio cholerae B33] gi|229517827|ref|ZP_04407271.1| GTP-binding protein EngA [Vibrio cholerae RC9] gi|229608641|ref|YP_002879289.1| GTP-binding protein EngA [Vibrio cholerae MJ-1236] gi|254847900|ref|ZP_05237250.1| GTP-binding protein EngA [Vibrio cholerae MO10] gi|255744569|ref|ZP_05418520.1| GTP-binding protein EngA [Vibrio cholera CIRS 101] gi|262161296|ref|ZP_06030407.1| GTP-binding protein EngA [Vibrio cholerae INDRE 91/1] gi|262168789|ref|ZP_06036484.1| GTP-binding protein EngA [Vibrio cholerae RC27] gi|298499104|ref|ZP_07008911.1| ribosome-associated GTPase EngA [Vibrio cholerae MAK 757] gi|26006742|sp|Q9KTW7|DER_VIBCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|172047436|sp|A5F3E6|DER_VIBC3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783177|sp|C3LT16|DER_VIBCM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|9655209|gb|AAF93928.1| GTP-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121550030|gb|EAX60046.1| GTP-binding protein [Vibrio cholerae 2740-80] gi|121631521|gb|EAX63891.1| GTP-binding protein [Vibrio cholerae V52] gi|126512192|gb|EAZ74786.1| GTP-binding protein [Vibrio cholerae NCTC 8457] gi|126521085|gb|EAZ78308.1| GTP-binding protein [Vibrio cholerae B33] gi|146316998|gb|ABQ21537.1| GTP-binding protein [Vibrio cholerae O395] gi|227008830|gb|ACP05042.1| GTP-binding protein [Vibrio cholerae M66-2] gi|227012587|gb|ACP08797.1| GTP-binding protein [Vibrio cholerae O395] gi|229344542|gb|EEO09516.1| GTP-binding protein EngA [Vibrio cholerae RC9] gi|229350670|gb|EEO15611.1| GTP-binding protein EngA [Vibrio cholerae B33] gi|229357846|gb|EEO22763.1| GTP-binding protein EngA [Vibrio cholerae BX 330286] gi|229371296|gb|ACQ61719.1| GTP-binding protein EngA [Vibrio cholerae MJ-1236] gi|254843605|gb|EET22019.1| GTP-binding protein EngA [Vibrio cholerae MO10] gi|255737600|gb|EET92994.1| GTP-binding protein EngA [Vibrio cholera CIRS 101] gi|262022907|gb|EEY41613.1| GTP-binding protein EngA [Vibrio cholerae RC27] gi|262029046|gb|EEY47699.1| GTP-binding protein EngA [Vibrio cholerae INDRE 91/1] gi|297543437|gb|EFH79487.1| ribosome-associated GTPase EngA [Vibrio cholerae MAK 757] Length = 494 Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 10/133 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G K G EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I + +G + + L + V+L +V A + DE A + +K Sbjct: 60 IDGSEEGVETKMAQQSLAAIDEADVVLFMVDG------RAGLTVADEAIAQHLRRIEKPA 113 Query: 275 IVGLSQIDTVDSD 287 I+ ++++D +D+D Sbjct: 114 ILVVNKVDGIDAD 126 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT +K +E++L D G+ + Sbjct: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRK 267 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + L+ E +V+L +V A EN+ +L A NS + ++ Sbjct: 268 RINETVEKFSVVKTLQAIEDANVVLLVVDA-RENISDQDLSLLG--FALNS---GRSIVI 321 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D + D K EL + G V F S++ G G+ + E + + Sbjct: 322 AVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 373 >gi|309775528|ref|ZP_07670528.1| GTP-binding protein Era [Erysipelotrichaceae bacterium 3_1_53] gi|308916622|gb|EFP62362.1| GTP-binding protein Era [Erysipelotrichaceae bacterium 3_1_53] Length = 299 Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I IIG PNAGKST L ++ + K I P TT GI+ +F+ D PGI K Sbjct: 8 ISIIGRPNAGKSTLLNAILQEKVAITTPKPQTTRNNISGILTREDAQFVFVDTPGIHKPK 67 Query: 221 HQ 222 H+ Sbjct: 68 HE 69 >gi|255311185|ref|ZP_05353755.1| GTP binding protein [Chlamydia trachomatis 6276] gi|255317486|ref|ZP_05358732.1| GTP binding protein [Chlamydia trachomatis 6276s] Length = 447 Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 16/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I +IG N+GKST L +T A + + F TL P V + +L D G I Sbjct: 226 IPTFALIGYTNSGKSTLLNLLTSADTYVENKLFATLDPKTRRCVLPCGQRVLLTDTVGFI 285 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 + H L+ + +LLH+V A E+V+ + IL EL ++ Sbjct: 286 RKLPHTLVAAFKSTLEAALQEDILLHVVDASHPLALEHVETT-KAILQELGITQPQV--- 341 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I L++ID V A + ++ P S+ TG GI ++L + D + Sbjct: 342 --ITVLNKIDKVADGVTASRLRLMSPN----PVCVSAKTGEGIRELLRSMEDMV 389 >gi|149194640|ref|ZP_01871736.1| GTPase EngB [Caminibacter mediatlanticus TB-2] gi|149135384|gb|EDM23864.1| GTPase EngB [Caminibacter mediatlanticus TB-2] Length = 197 Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 85/174 (48%), Gaps = 19/174 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPG--- 215 ++ ++G N GKS+FL + T K K++ P T N +++ K+++L D+PG Sbjct: 21 TEVALLGRSNVGKSSFLNTFTNQKIAKVSSTPGKTKLINFFEIEDKGKKYVLVDLPGFGY 80 Query: 216 --IIKNAHQGAGIG-DRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY-NSELRK 271 + K+ + G D FLK+ + +H+ A ++ I + + Y S LRK Sbjct: 81 AKVSKSMLKDWGKNLDEFLKNRYNIKLFIHLRDARHPDLD-----IDNNVDEYLKSFLRK 135 Query: 272 KIEIVGL-SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 +I+ + ++ID + LA+ L + + F S++ GI ++ E +++ Sbjct: 136 DQQILTVFTKIDKLKQSELAK----LKQKYPEALF-VSNLKKRGINKVKEKINE 184 >gi|27363891|ref|NP_759419.1| GTP-binding protein Der [Vibrio vulnificus CMCP6] gi|31340067|sp|Q8DF02|DER_VIBVU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|27360008|gb|AAO08946.1| GTP-binding protein EngA [Vibrio vulnificus CMCP6] Length = 496 Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 81/173 (46%), Gaps = 13/173 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR++ +AD+P T G K G +FI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I + +G + ++ L V+L +V +A + ++A+ ++ K Sbjct: 60 IDGSEEGVETKMAEQSLAAIREADVVLFMVDG-----RAGLTPSDEAIAAHLRKIEKATM 114 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 +V ++++D +D+D + +L ++ ++ G G+ ++E D F Sbjct: 115 LV-VNKVDGIDADAASADFWQLGVDEM---YQIAAAHGRGVTALIERALDPFF 163 Score = 35.8 bits (81), Expect = 9.5, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 210 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRG 269 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK E +V+L ++ A E + L+A S ++ Sbjct: 270 KVHETVEKFSVVKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRS------IVL 323 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D++ K EL + G V F S++ G G+ + E + + Sbjct: 324 AVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 375 >gi|121602370|ref|YP_988790.1| GTP-binding protein Era [Bartonella bacilliformis KC583] gi|120614547|gb|ABM45148.1| GTP-binding protein Era [Bartonella bacilliformis KC583] Length = 301 Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 15/167 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGII--K 218 + ++G+PNAGKST + + K I + TT GIV + +L D PGI + Sbjct: 12 VSLVGVPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIVIHEKTQIVLVDTPGIFRPR 71 Query: 219 NAHQGAGIGDRF--LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + A + + ++ + VL+ + + L + V A +LD L+ K+ +I+ Sbjct: 72 KRLERAMVSAAWSGIRDADALLVLIDVQNGLSDEVNA----MLDNLANI-----KQDKIL 122 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQV-PFEFSSITGHGIPQILECL 322 L++IDTV +L ++ + + F S++ G G +L+ L Sbjct: 123 VLNKIDTVAKSSLLALTAKINERVNFLRTFMISALNGSGCKDLLDYL 169 >gi|330957806|gb|EGH58066.1| GTPase Era [Pseudomonas syringae pv. maculicola str. ES4326] Length = 300 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + + D PG+ KN Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGAVQAVYVDTPGMHKNG 71 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 72 EKAL---NRYMNKT 82 >gi|78486182|ref|YP_392107.1| ferrous iron transport protein B [Thiomicrospira crunogena XCL-2] gi|78364468|gb|ABB42433.1| Ferrous ion uptake (FeoB) family transporter [Thiomicrospira crunogena XCL-2] Length = 769 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 39/179 (21%), Positives = 86/179 (48%), Gaps = 16/179 (8%) Query: 150 KIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI 209 K+ +K K+ + +IG PN+GK+T +T + ++P T+ +G + G + + Sbjct: 2 KLSQIKKKIPHQVALIGSPNSGKTTLFNRLTGSNQTTGNWPGVTVEKKVGDFQAGLQNYH 61 Query: 210 LADIPGI--IKNAHQGAGIGDRFLKHTERTH---VLLHIVSALEENVQAAYQCILDELSA 264 + D+PG+ ++N+ + +G+ ++ + + H +L+++V A C+ +L Sbjct: 62 ITDLPGVYSLENSTR-SGLDEKVARDFLQNHPIDLLINVVDA---------TCLERQLFL 111 Query: 265 YNSELRKKIE-IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 L + +V L+Q+D +++ L + L+ + G S+ GI + E L Sbjct: 112 TAQLLHMGLPVVVVLNQMDKLENHHLELDETVLSEKLGCPVIPISAYYNQGIDEFKETL 170 >gi|89072706|ref|ZP_01159271.1| GTP-binding protein EngA [Photobacterium sp. SKA34] gi|89051526|gb|EAR56980.1| GTP-binding protein EngA [Photobacterium sp. SKA34] Length = 500 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 21/173 (12%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IK 218 + IIG PN GKST + + + D P TT ++ +E++L D GI K Sbjct: 214 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGQEYVLIDTAGIRRRK 273 Query: 219 NAHQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 N HQ ++F LK E +V+L I+ A E + L+A S Sbjct: 274 NMHQAV---EKFSVIQTLKAVEDANVVLLIIDARENISDQDLSLLGFALNAGRS------ 324 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECL 322 ++ +++ D +D++ R K+EL + G V F S++ G G+ + E + Sbjct: 325 LVIAVNKWDGLDNEVKERVKSELDRRLGFVDFARIHFISALHGTGVGHLYESV 377 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 10/134 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEEHEFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L +V + AA + I L + R+K Sbjct: 60 IDGTEEGVETKMAEQSLAAIEEADVVLFLVDG-RAGLTAADEAIAKHLRS-----REKPT 113 Query: 275 IVGLSQIDTVDSDT 288 + ++++D +D+D+ Sbjct: 114 FLVVNKVDGIDADS 127 >gi|41582279|gb|AAS07893.1| GTP-binding protein HflX [uncultured marine bacterium 463] Length = 423 Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 24/182 (13%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADI 213 K + I + ++G NAGKST +T + AD F TL P L ++ E +LAD Sbjct: 194 KRQEIPTVSLVGYTNAGKSTLFNYITDSGVYAADQLFATLDPTLRRLELENVGPVVLADT 253 Query: 214 PGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVSAL----EENVQAAYQCILDELSAYN 266 G I AH + + F L+ T +LLH++ A E+N+ ++ +L E+ A Sbjct: 254 VGFI--AHLPHKLVEAFKATLEETLNADLLLHVIDAASDEREDNIYQVHE-VLQEIGAD- 309 Query: 267 SELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQILECLHD 324 EI L + +D L +K + +P S+ TG G+ +L+ + + Sbjct: 310 -------EIPRLEIYNKLD---LLEQKPRIDRNADGIPERVWLSAATGDGVSLLLQAVSE 359 Query: 325 KI 326 + Sbjct: 360 VV 361 >gi|262304263|gb|ACY44724.1| GTP-binding protein [Lynceus sp. 'Lyn'] Length = 278 Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---ELSAYN 266 + DI G++K AH+G G+G+ FL H + + H+ A E + ++ ++ N Sbjct: 35 VVDIAGLVKGAHEGQGLGNAFLSHIKGVDAIFHLCRAFESEDVTHVEGDVNPPRDIEIIN 94 Query: 267 SELRKKIEIVGLSQIDTVDSDTLARKK 293 ELR K E +Q+D V+ + KK Sbjct: 95 EELRLKDEEYLTTQLDKVERMCRSDKK 121 >gi|260554075|ref|ZP_05826338.1| GTPase [Acinetobacter sp. RUH2624] gi|260404814|gb|EEW98321.1| GTPase [Acinetobacter sp. RUH2624] Length = 444 Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 7/126 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST + ++ AD F TL P L ++ +G +LAD G + Sbjct: 199 IPTVSLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLADTVGFV 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELR--K 271 +N H L+ T +LLH++ + ++ A + +L E+ A + LR Sbjct: 259 RNLQHDLVESFKATLEETLEATLLLHVIDSSSHDMLDQIEAVEGVLKEIGADSPVLRVYN 318 Query: 272 KIEIVG 277 KI++ G Sbjct: 319 KIDLSG 324 >gi|153828302|ref|ZP_01980969.1| GTP-binding protein [Vibrio cholerae 623-39] gi|254285481|ref|ZP_04960445.1| GTP-binding protein [Vibrio cholerae AM-19226] gi|148876256|gb|EDL74391.1| GTP-binding protein [Vibrio cholerae 623-39] gi|150424343|gb|EDN16280.1| GTP-binding protein [Vibrio cholerae AM-19226] Length = 494 Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 10/133 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G K G EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I + +G + + L + V+L +V A + DE A + +K Sbjct: 60 IDGSEEGVETKMAQQSLAAIDEADVVLFMVDG------RAGLTVADEAIAQHLRRIEKPA 113 Query: 275 IVGLSQIDTVDSD 287 I+ ++++D +D+D Sbjct: 114 ILVVNKVDGIDAD 126 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT +K +E++L D G+ + Sbjct: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRK 267 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + L+ E +V+L +V A EN+ +L A NS + ++ Sbjct: 268 RINETVEKFSVVKTLQAIEDANVVLLVVDA-RENISDQDLSLLG--FALNS---GRSIVI 321 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D + D K EL + G V F S++ G G+ + E + + Sbjct: 322 AVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 373 >gi|325286475|ref|YP_004262265.1| GTP-binding proten HflX [Cellulophaga lytica DSM 7489] gi|324321929|gb|ADY29394.1| GTP-binding proten HflX [Cellulophaga lytica DSM 7489] Length = 403 Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 14/147 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + + ++G N GKST + V+++ D F TL + V G F+L+D G I+ Sbjct: 199 LVRVALVGYTNVGKSTLMNVVSKSDVFAEDKLFATLDTTVRKVVLGNLPFLLSDTVGFIR 258 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKIE 274 Q L +LLHIV N + A+ IL+E+ A + K Sbjct: 259 KLPTQLVESFKSTLDEVREADLLLHIVDISHPNFEDHIASVHKILEEIKADD-----KKT 313 Query: 275 IVGLSQID-----TVDSDTLARKKNEL 296 I+ ++ID T+D D L +K ++ Sbjct: 314 IIVFNKIDQFTHETIDDDDLVTEKTKI 340 >gi|302781733|ref|XP_002972640.1| hypothetical protein SELMODRAFT_231970 [Selaginella moellendorffii] gi|300159241|gb|EFJ25861.1| hypothetical protein SELMODRAFT_231970 [Selaginella moellendorffii] Length = 623 Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 13/177 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I I G PN GKS+F+ +TRA + Y FTT +G Y + + D PGI+ + Sbjct: 171 ILICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRWQVIDTPGILDHP- 229 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + DR L HI +A+ V + C I + + +NS K + Sbjct: 230 ----LEDRNTIEMLSITALAHIRAAVLFFVDVSGSCGYSIAQQAALFNSIRPLFDNKPLL 285 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 V S+ID ++L + +L + + +++T G+ + +K+ R E Sbjct: 286 VVCSKIDLQSLESLPEEDRQLIMEMKKEA--SNTLTEEGVINVKNTACEKLLQHRVE 340 >gi|221639215|ref|YP_002525477.1| GTP-binding protein, HSR1-related [Rhodobacter sphaeroides KD131] gi|221159996|gb|ACM00976.1| GTP-binding protein, HSR1-related [Rhodobacter sphaeroides KD131] Length = 447 Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 15/168 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST +T A D F TL P + G+ ++ IL+D G I + Sbjct: 229 VALVGYTNAGKSTLFNRMTGADVLAKDMLFATLDPTMRGVTLPSGRKVILSDTVGFISDL 288 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 Q L+ ++LH+ ++ E QAA IL L + ++E+ Sbjct: 289 PTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQAADVAEILQSLGVKGAT--PQVEV- 345 Query: 277 GLSQIDTVDSDTLARKKNELATQCG--QVPFEFSSITGHGIPQILECL 322 +++D V+ T +L Q + F S++TG G+P +LE + Sbjct: 346 -WNKLDLVEGAT----HEQLLAQAAKSETIFALSALTGEGLPDLLEAV 388 >gi|220912237|ref|YP_002487546.1| GTP-binding proten HflX [Arthrobacter chlorophenolicus A6] gi|219859115|gb|ACL39457.1| GTP-binding proten HflX [Arthrobacter chlorophenolicus A6] Length = 553 Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 17/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I G NAGKS+ L +T A + + F TL P + +G + LAD G Sbjct: 331 VPSVAIAGYTNAGKSSLLNRLTDAGVLVENALFATLDPTIRKAETSDGLG-YTLADTVGF 389 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKK 272 +++ Q L+ + ++LH+V A + + AA + + E+ A RK Sbjct: 390 VRSLPTQLVEAFRSTLEEVADSDLILHVVDASHPDPEGQIAAVRKVFGEVDA-----RKI 444 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI+ L++ D D + R K S+ TG GI ++L+ + D I Sbjct: 445 PEIIVLNKADAADPFVVERLKQREPRHVV-----VSARTGEGIAELLKTISDSI 493 >gi|163785530|ref|ZP_02180109.1| GTP-binding protein HflX [Hydrogenivirga sp. 128-5-R1-1] gi|159879202|gb|EDP73127.1| GTP-binding protein HflX [Hydrogenivirga sp. 128-5-R1-1] Length = 234 Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust. Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 19/108 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL--------YPNLGIVKEGYKEFILADI 213 + ++G NAGKS+ L +T+ + I++ F TL +P++ K+ ++ D Sbjct: 59 VALVGYTNAGKSSLLNRLTKREAFISNQLFATLDTKTSYIVFPDIN------KKVVITDT 112 Query: 214 PGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCI 258 G +K+ + I D F L+ E ++LH+V +EN Q + + Sbjct: 113 VGFVKDMPK--EIMDAFMATLEEVEEADLILHVVDVSDENWQEKLEAV 158 >gi|186476172|ref|YP_001857642.1| GTP-binding proten HflX [Burkholderia phymatum STM815] gi|184192631|gb|ACC70596.1| GTP-binding proten HflX [Burkholderia phymatum STM815] Length = 414 Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 10/113 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 198 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGEEVGQIVVSDTVGFIRE 257 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 HQ L+ T +LLH+V A+ LD++ N LR+ Sbjct: 258 LPHQLVAAFRATLEETIHADLLLHVVD-------ASSAVRLDQIDQVNDVLRE 303 >gi|288905822|ref|YP_003431044.1| GTP-binding protein era [Streptococcus gallolyticus UCN34] gi|306831911|ref|ZP_07465066.1| GTP-binding protein Era [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|306834025|ref|ZP_07467146.1| GTP-binding protein Era [Streptococcus bovis ATCC 700338] gi|325978857|ref|YP_004288573.1| GTP-binding protein era [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732548|emb|CBI14120.1| GTP-binding protein era [Streptococcus gallolyticus UCN34] gi|304423813|gb|EFM26958.1| GTP-binding protein Era [Streptococcus bovis ATCC 700338] gi|304425837|gb|EFM28954.1| GTP-binding protein Era [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178785|emb|CBZ48829.1| era, yqfH, sdgE, bex, rbaA GTP-binding protein era homolog [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 298 Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 7 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDTEQIVFIDTPGIHKPK 66 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 67 N---ALGDFMVESAYSTLREVETVLFMVPA-DEKRGKGDDMIIERLKAAKIPV-----IL 117 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ + ++ L D + Sbjct: 118 VINKIDKVHPDQLLEQIDDFRSQMDFKEIVP--ISALQGNNVETLMNILKDNL 168 >gi|161485612|ref|YP_386558.2| GTP-binding protein EngA [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 455 Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 21/170 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNA 220 + ++G PNAGKS+ + +++ ++ I T ++ I E G + ++ D G+ + A Sbjct: 191 LAMLGRPNAGKSSLVNALSGSRRMIVSDVAGTTRDSVDIAVELGGRRYVFVDTAGVRRRA 250 Query: 221 HQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQCI--LDELSAYNSELRKKI 273 + +R+ LK T + V L ++ A+E Q + I LDE RK Sbjct: 251 KIQDPV-ERYSVNSSLKSTTKADVTLVVLDAVEGLTQQDKRLIDLLDE--------RKTP 301 Query: 274 EIVGLSQIDTVDSD---TLARKKNELATQCGQVPFEF-SSITGHGIPQIL 319 ++ +++ID V D L R ++ T C VP + S+ +G G+ ++L Sbjct: 302 FMLVINKIDLVPRDGLTALKRLYDDALTFCKHVPIMYISARSGRGVDKLL 351 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I +IG PN GKST + R+ I D P T G VK G ++FI+ D GI Sbjct: 1 MLPKIALIGRPNVGKSTLFNRLIRSNRAITHDRPGVTRDRMEGYVKVGDRKFIIIDTGGI 60 Query: 217 IKNAHQGAGIG 227 + H G Sbjct: 61 TLDEHAAVAEG 71 >gi|153216257|ref|ZP_01950357.1| GTP-binding protein [Vibrio cholerae 1587] gi|124114402|gb|EAY33222.1| GTP-binding protein [Vibrio cholerae 1587] Length = 494 Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 10/133 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G K G EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I + +G + + L + V+L +V A + DE A + +K Sbjct: 60 IDGSEEGVETKMAQQSLAAIDEADVVLFMVDG------RAGLTVADEAIAQHLRRIEKPA 113 Query: 275 IVGLSQIDTVDSD 287 I+ ++++D +D+D Sbjct: 114 ILVVNKVDGIDAD 126 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT +K +E++L D G+ + Sbjct: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRK 267 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + L+ E +V+L +V A EN+ +L A NS + ++ Sbjct: 268 RINETVEKFSVVKTLQAIEDANVVLLVVDA-RENISDQDLSLLG--FALNS---GRSIVI 321 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D + D K EL + G V F S++ G G+ + E + + Sbjct: 322 AVNKWDGLSLDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 373 >gi|153800614|ref|ZP_01955200.1| GTP-binding protein [Vibrio cholerae MZO-3] gi|153824529|ref|ZP_01977196.1| GTP-binding protein [Vibrio cholerae MZO-2] gi|229513098|ref|ZP_04402564.1| GTP-binding protein EngA [Vibrio cholerae TMA 21] gi|229523415|ref|ZP_04412822.1| GTP-binding protein EngA [Vibrio cholerae TM 11079-80] gi|229525408|ref|ZP_04414813.1| GTP-binding protein EngA [Vibrio cholerae bv. albensis VL426] gi|229530107|ref|ZP_04419497.1| GTP-binding protein EngA [Vibrio cholerae 12129(1)] gi|254225026|ref|ZP_04918640.1| GTP-binding protein [Vibrio cholerae V51] gi|124123903|gb|EAY42646.1| GTP-binding protein [Vibrio cholerae MZO-3] gi|125622413|gb|EAZ50733.1| GTP-binding protein [Vibrio cholerae V51] gi|149741747|gb|EDM55776.1| GTP-binding protein [Vibrio cholerae MZO-2] gi|229333881|gb|EEN99367.1| GTP-binding protein EngA [Vibrio cholerae 12129(1)] gi|229338989|gb|EEO04006.1| GTP-binding protein EngA [Vibrio cholerae bv. albensis VL426] gi|229339778|gb|EEO04793.1| GTP-binding protein EngA [Vibrio cholerae TM 11079-80] gi|229349991|gb|EEO14945.1| GTP-binding protein EngA [Vibrio cholerae TMA 21] gi|327483547|gb|AEA77954.1| GTP-binding protein EngA [Vibrio cholerae LMA3894-4] Length = 494 Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 10/133 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G K G EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I + +G + + L + V+L +V A + DE A + +K Sbjct: 60 IDGSEEGVETKMAQQSLAAIDEADVVLFMVDG------RAGLTVADEAIAQHLRRIEKPA 113 Query: 275 IVGLSQIDTVDSD 287 I+ ++++D +D+D Sbjct: 114 ILVVNKVDGIDAD 126 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT +K +E++L D G+ + Sbjct: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRK 267 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + L+ E +V+L +V A EN+ +L A NS + ++ Sbjct: 268 RINETVEKFSVVKTLQAIEDANVVLLVVDA-RENISDQDLSLLG--FALNS---GRSIVI 321 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D + D K EL + G V F S++ G G+ + E + + Sbjct: 322 AVNKWDGLSLDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 373 >gi|327482306|gb|AEA85616.1| GTP-binding protein HflX [Pseudomonas stutzeri DSM 4166] Length = 433 Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 2/92 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T ++ A+ F TL P L ++ E ILAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNALTESEVYAANQLFATLDPTLRRLELEDVGPVILADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 ++ H+ L+ + +LLH++ A E Sbjct: 258 RHLPHKLVESFRATLEESSNADLLLHVIDAHE 289 >gi|225849583|ref|YP_002729817.1| GTP-binding protein EngA [Persephonella marina EX-H1] gi|254783162|sp|C0QT02|DER_PERMH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|225645742|gb|ACO03928.1| ribosome-associated GTPase EngA [Persephonella marina EX-H1] Length = 447 Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 17/177 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + + I+G PNAGKS+ L ++ + +++ P TT + + ++F+ D G+ Sbjct: 182 VIKVAIVGKPNAGKSSLLNAILGEERAVVSEIPGTTRDVVDTLFEWKDQKFLFLDTAGLR 241 Query: 218 KNAHQGAGIG----DRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 K + GI R L ++ V++H++ A + + D A+ + K Sbjct: 242 KKSKVDYGIEFFSIGRTLDAIKKADVIVHVIDAQQGATEQ------DTKIAHLIQKYTKP 295 Query: 274 EIVGLSQIDTV--DSDTLARKKNELATQCGQVPFEFSSITG----HGIPQILECLHD 324 ++ +++IDTV S+ L R KN++ + +P+ +T GI Q+L+ + D Sbjct: 296 AVIVINKIDTVPPKSEVLNRIKNQVRERLYFIPYAPIVMTSAKNRKGIKQLLKEITD 352 >gi|224009828|ref|XP_002293872.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220970544|gb|EED88881.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 453 Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 10/171 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYK---EFILADIPGII 217 + ++G NAGKST L +T+A + F TL P VK GYK E +L D G I Sbjct: 196 LALVGYTNAGKSTLLNCLTKAGILAENILFATLDPTTRRVKLPGYKTHPEVLLTDTVGFI 255 Query: 218 -KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 K Q L+ + VL+HIV + + LS + + + + Sbjct: 256 QKLPTQLVAAFRATLEEVKEADVLVHIVDVSNPCWRKQEDSVTKVLSEIGAGDKPTVRV- 314 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQ-VPFEFSSITGHGIPQILECLHDKI 326 +++D +D + K E A C + SS+TG G+ + + D + Sbjct: 315 -FNKLDLLDKEDAELIKYEAA--CSENFSVGISSLTGEGLSDFVAVVEDAL 362 >gi|168212277|ref|ZP_02637902.1| ferrous iron transport protein B [Clostridium perfringens CPE str. F4969] gi|170716135|gb|EDT28317.1| ferrous iron transport protein B [Clostridium perfringens CPE str. F4969] Length = 669 Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 80/168 (47%), Gaps = 14/168 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK++ +T+++ I ++P T+ G +K + + + D+PG A Sbjct: 4 IALAGNPNCGKTSLFNLLTKSRQHIGNWPGVTVEKKEGTLKFKGESYKVIDLPGTYSLGA 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + I R ++ V++++V A LE N+ Q I E+ + ++ L Sbjct: 64 YSEDEIVARNYILKDKPDVVINVVDATNLERNLYLTTQLI---------EMGANV-VIAL 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC-LHDK 325 + ID ++ + N+L+ + G + S++ GI +++E +H K Sbjct: 114 NMIDQAEALNIEIDTNKLSKRLGVPIIKTSALKNRGIEELIETSIHSK 161 >gi|146283979|ref|YP_001174132.1| GTP-binding protein HflX [Pseudomonas stutzeri A1501] gi|145572184|gb|ABP81290.1| GTP-binding protein HflX [Pseudomonas stutzeri A1501] Length = 419 Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 2/92 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T ++ A+ F TL P L ++ E ILAD G I Sbjct: 184 IPSVSLVGYTNAGKSTLFNALTESEVYAANQLFATLDPTLRRLELEDVGPVILADTVGFI 243 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE 248 ++ H+ L+ + +LLH++ A E Sbjct: 244 RHLPHKLVESFRATLEESSNADLLLHVIDAHE 275 >gi|68066887|ref|XP_675415.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56494587|emb|CAH96688.1| conserved hypothetical protein [Plasmodium berghei] Length = 556 Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust. Identities = 45/205 (21%), Positives = 90/205 (43%), Gaps = 22/205 (10%) Query: 143 PGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIV 201 G++ ++++ K I+DI IG GKST L+ +T + + Y ++ Sbjct: 358 SGVINYIRVVY---KCISDICFIGYDGVGKSTLLSLITHQIHTVNNLYILKKIF-----F 409 Query: 202 KEGYKEFILADIPGIIKNAHQGA-------GIGDRFLKHTERTHVLLHIVSALEENVQAA 254 K+ Y + +AD Q I F+K+ E TH+L+ I+ + ++ A Sbjct: 410 KDNY-QISVADFFSEKSETSQNDEKNNITFNINPNFMKYMELTHLLV-IILDINMDIAAQ 467 Query: 255 YQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE---LATQCGQVPFEF-SSI 310 + I +EL + + +K IV +++ D + + + + + +P F S+ Sbjct: 468 FCNIREELKRKDDRIYQKPYIVVINKCDLNFKEKMNKVEEAYKGIKNYDNNIPIFFVSAK 527 Query: 311 TGHGIPQILECLHDKIFSIRGENEF 335 G GI + + CL + + ++ N F Sbjct: 528 YGMGITEFVNCLRNCVQKLKHNNSF 552 >gi|261212137|ref|ZP_05926423.1| GTP-binding protein EngA [Vibrio sp. RC341] gi|260838745|gb|EEX65396.1| GTP-binding protein EngA [Vibrio sp. RC341] Length = 494 Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 10/133 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G K G EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I + +G + + L + V+L +V A + DE A + +K Sbjct: 60 IDGSEEGVETKMAQQSLAAIDEADVVLFMVDG------RAGLTVADEAIAQHLRRIEKPA 113 Query: 275 IVGLSQIDTVDSD 287 I+ ++++D +D+D Sbjct: 114 ILVVNKVDGIDAD 126 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT +K +E++L D G+ + Sbjct: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRK 267 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + L+ E +V+L +V A EN+ +L A NS + ++ Sbjct: 268 RINETVEKFSVVKTLQAIEDANVVLLVVDA-RENISDQDLSLLG--FALNS---GRSIVI 321 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D + D K EL + G V F S++ G G+ + E + + Sbjct: 322 AVNKWDGLSIDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 373 >gi|212638693|ref|YP_002315213.1| GTPase [Anoxybacillus flavithermus WK1] gi|212560173|gb|ACJ33228.1| GTPase [Anoxybacillus flavithermus WK1] Length = 306 Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 8/92 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D P TT G+ + I D PGI K Sbjct: 15 VAIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTDDAQIIFIDTPGIHKPK 74 Query: 221 HQGAGIGDRFLK----HTERTHVLLHIVSALE 248 H+ +GD +K + ++L +V+A+E Sbjct: 75 HK---LGDFMVKVAQSALQEVDLILFMVNAVE 103 >gi|262192496|ref|ZP_06050647.1| GTP-binding protein EngA [Vibrio cholerae CT 5369-93] gi|262031655|gb|EEY50242.1| GTP-binding protein EngA [Vibrio cholerae CT 5369-93] Length = 494 Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 10/133 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G K G EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I + +G + + L + V+L +V A + DE A + +K Sbjct: 60 IDGSEEGVETKMAQQSLAAIDEADVVLFMVDG------RAGLTVADEAIAQHLRRIEKPA 113 Query: 275 IVGLSQIDTVDSD 287 I+ ++++D +D+D Sbjct: 114 ILVVNKVDGIDAD 126 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT +K +E++L D G+ + Sbjct: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRK 267 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + L+ E +V+L +V A EN+ +L A NS + ++ Sbjct: 268 RINETVEKFSVVKTLQAIEDANVVLLVVDA-RENISDQDLSLLG--FALNS---GRSIVI 321 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D + D K EL + G V F S++ G G+ + E + + Sbjct: 322 AVNKWDGLSLDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 373 >gi|290580024|ref|YP_003484416.1| GTP-binding protein [Streptococcus mutans NN2025] gi|254996923|dbj|BAH87524.1| GTP-binding protein [Streptococcus mutans NN2025] Length = 299 Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 15/171 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEKRGKGDNMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q Q S++ G+ + +++ L D + Sbjct: 119 VINKIDKVHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHL 169 >gi|254496731|ref|ZP_05109592.1| GTP binding protein HflX [Legionella drancourtii LLAP12] gi|254354047|gb|EET12721.1| GTP binding protein HflX [Legionella drancourtii LLAP12] Length = 418 Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 5/106 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST ++T + +A+ F TL P + + G ILAD G I++ Sbjct: 200 VSLVGYTNAGKSTLFNALTGERIYVANQLFATLDPTMRQLSLPGASGVILADTVGFIRDL 259 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE---ENVQAAYQCILDEL 262 H L+ T++ +LLH++ + + + Q +LDEL Sbjct: 260 PHHLVEAFRATLEETQQADLLLHVIDISDPHWRDTVFSVQQVLDEL 305 >gi|120555679|ref|YP_960030.1| GTP-binding protein, HSR1-related [Marinobacter aquaeolei VT8] gi|120325528|gb|ABM19843.1| GTP-binding protein, HSR1-related protein [Marinobacter aquaeolei VT8] Length = 432 Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 82/174 (47%), Gaps = 15/174 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +T + AD F TL P L ++ ++AD G I Sbjct: 197 IPTLSLVGYTNAGKSTLFNRITTSSVYAADQLFATLDPTLRRLELPDIGPVVMADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIV----SALEENVQAAYQCILDELSAYNSELRKK 272 ++ H+ L+ T + +LLH++ S +EN++ + +L E+ A + Sbjct: 257 RHLPHKLVEAFRATLEETTQATLLLHVIDCHDSRRDENIEQV-ESVLAEIGADEIPM--- 312 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + ++ID +D +NE + V S+++G G+P + + + +++ Sbjct: 313 --LQVFNKIDLLDGFEPRIDRNE---EGLPVRAWVSAVSGEGLPLLFDAIVERL 361 >gi|222151466|ref|YP_002560622.1| hypothetical protein MCCL_1219 [Macrococcus caseolyticus JCSC5402] gi|222120591|dbj|BAH17926.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 300 Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G++ + I D PGI K Sbjct: 10 VAIIGRPNVGKSTFMNKVLGQKVAIMSDKAQTTRNKVQGVLTTEQSQIIFIDTPGIHKPK 69 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H + K+T R + + +EE++ + I++ L + + + L++ Sbjct: 70 HMLGDYMMKVAKNTLREVDAILFMVNVEESIGRGDEFIIELLKNNRTPI-----FLVLNK 124 Query: 281 IDTVDSDTLARKKNELATQCGQVPF----EFSSITGHGIPQILECL 322 ID + D L + E+ +PF S++ G+ + +++ + Sbjct: 125 IDKIHPDELIK---EIEKYKDLLPFAEIVPISALQGNNVDHLVKVI 167 >gi|83951644|ref|ZP_00960376.1| GTP-binding protein Era [Roseovarius nubinhibens ISM] gi|83836650|gb|EAP75947.1| GTP-binding protein Era [Roseovarius nubinhibens ISM] Length = 301 Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 9/169 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I +IG PNAGKST L + AK I + T + G+ EG + + D PG+ K Sbjct: 8 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVALEGEAQLVFVDTPGLFKPR 67 Query: 221 HQ--GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + A + + ++ V+L I + + + IL+ L R + + + Sbjct: 68 RRLDRAMVAAAWGGASDADVVVLLIEA--HRGLTEGVERILEGLGDVT---RGRPVALAI 122 Query: 279 SQIDTVDSDTLARKKNELATQCGQV-PFEFSSITGHGIPQILECLHDKI 326 ++ID V S+ L ++ T+ V F S+ GHG+ + + L +++ Sbjct: 123 NKIDRVKSEELLALTEKMNTRHEFVETFMISAERGHGVDDLRKWLAEQL 171 >gi|315223060|ref|ZP_07864939.1| GTP-binding protein Era [Streptococcus anginosus F0211] gi|315188010|gb|EFU21746.1| GTP-binding protein Era [Streptococcus anginosus F0211] Length = 299 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDQEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +VSA +EN I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVSA-DENRGKGDDMIMERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V + L + ++ Q VP S++ G+ + +++ L + + Sbjct: 119 VVNKIDKVHPNQLLSQIDDYRKQMDFKEVVP--ISALQGNNVSHLVDILSENL 169 >gi|297722589|ref|NP_001173658.1| Os03g0781000 [Oryza sativa Japonica Group] gi|255674944|dbj|BAH92386.1| Os03g0781000 [Oryza sativa Japonica Group] Length = 98 Score = 42.7 bits (99), Expect = 0.088, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 17/85 (20%) Query: 179 VTRAKPKIADYPFTTLYPNLGIVK------------EGYKEFI-----LADIPGIIKNAH 221 V K + A++PF T+ PN+G+V KE I L DI G++K A Sbjct: 10 VENGKAQAANFPFCTINPNVGVVAIPDARLHVLSKLSKSKETIPTSIELVDIAGLVKGAS 69 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSA 246 +G G+G++FL + +L S Sbjct: 70 KGEGLGNQFLSNIREVDSILQAFSG 94 >gi|153001514|ref|YP_001367195.1| GTP-binding protein EngA [Shewanella baltica OS185] gi|160876250|ref|YP_001555566.1| GTP-binding protein EngA [Shewanella baltica OS195] gi|217972557|ref|YP_002357308.1| GTP-binding protein EngA [Shewanella baltica OS223] gi|304410031|ref|ZP_07391650.1| ribosome-associated GTPase EngA [Shewanella baltica OS183] gi|307302256|ref|ZP_07582014.1| ribosome-associated GTPase EngA [Shewanella baltica BA175] gi|166225855|sp|A6WQP3|DER_SHEB8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|189037160|sp|A9KWW9|DER_SHEB9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783166|sp|B8E9T1|DER_SHEB2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|151366132|gb|ABS09132.1| small GTP-binding protein [Shewanella baltica OS185] gi|160861772|gb|ABX50306.1| small GTP-binding protein [Shewanella baltica OS195] gi|217497692|gb|ACK45885.1| small GTP-binding protein [Shewanella baltica OS223] gi|304351440|gb|EFM15839.1| ribosome-associated GTPase EngA [Shewanella baltica OS183] gi|306914294|gb|EFN44715.1| ribosome-associated GTPase EngA [Shewanella baltica BA175] gi|315268439|gb|ADT95292.1| ribosome-associated GTPase EngA [Shewanella baltica OS678] Length = 488 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L + A + AA I L + R+K Sbjct: 60 IDGTEEGIETKMAEQSLAAIEEADVVLFMTDA-RAGLTAADLSIAQHLRS-----REKTT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V +++D +D+D+ + L G+V ++ ++ G G+ ++E Sbjct: 114 FVVANKVDGIDADSACAEFWSLG--LGEV-YQMAASQGRGVTNMIE 156 Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 31/192 (16%) Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTT---LYPNLGIVKE 203 Q+++ L +KL IIG PN GKST + + + D P TT +Y + + +E Sbjct: 191 QKRLQDLPIKL----AIIGKPNVGKSTLTNRILGEERVVVFDEPGTTRDSIY--IPMERE 244 Query: 204 GYKEFILADIPGIIKNA--HQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQ 256 G +E+++ D G+ + + HQ + ++F LK E +V+L I+ A E + Sbjct: 245 G-REYVIIDTAGVRRRSKVHQ---VIEKFSVIKTLKAVEDANVVLLIIDAREGIAEQDLG 300 Query: 257 CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITG 312 + L+A + ++ +++ D +D R K+EL + G + F S++ G Sbjct: 301 LLGFALNA------GRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHG 354 Query: 313 HGIPQILECLHD 324 G+ + E + + Sbjct: 355 TGVGHLFESIEE 366 >gi|86138349|ref|ZP_01056923.1| GTP-binding protein HflX [Roseobacter sp. MED193] gi|85824874|gb|EAQ45075.1| GTP-binding protein HflX [Roseobacter sp. MED193] Length = 423 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 7/177 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + ++G NAGKST +T A+ D F TL P + V+ E IL+D G I + Sbjct: 205 VALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVEMPDGPEIILSDTVGFISDL 264 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN-SELRKKIEIVGL 278 R L+ V+LH+ E+ Q + LS E R +IE+ Sbjct: 265 PTELVAAFRATLEEVLAADVILHVRDISHEDSQNQANDVAAILSTLGVDETRAQIEV--W 322 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 +++D + D ++ A + G S++TG GI +L+ + K+ +R EF Sbjct: 323 NKLDQLPEDVAEARRQRAAREEG--IHAISALTGEGIEALLDDVALKLEGVRHVEEF 377 >gi|297581162|ref|ZP_06943086.1| GTP-binding protein [Vibrio cholerae RC385] gi|297534478|gb|EFH73315.1| GTP-binding protein [Vibrio cholerae RC385] Length = 494 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 10/133 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G K G EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I + +G + + L + V+L +V A + DE A + +K Sbjct: 60 IDGSEEGVETKMAQQSLAAIDEADVVLFMVDG------RAGLTVADEAIAQHLRRIEKPA 113 Query: 275 IVGLSQIDTVDSD 287 I+ ++++D +D+D Sbjct: 114 ILVVNKVDGIDAD 126 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT +K +E++L D G+ + Sbjct: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRK 267 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + L+ E +V+L +V A EN+ +L A NS + ++ Sbjct: 268 RINETVEKFSVVKTLQAIEDANVVLLVVDA-RENISDQDLSLLG--FALNS---GRSIVI 321 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D + D K EL + G V F S++ G G+ + E + + Sbjct: 322 AVNKWDGLSLDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 373 >gi|197105332|ref|YP_002130709.1| GTP-binding protein Era [Phenylobacterium zucineum HLK1] gi|196478752|gb|ACG78280.1| GTP-binding protein Era [Phenylobacterium zucineum HLK1] Length = 326 Score = 42.4 bits (98), Expect = 0.088, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 28/188 (14%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 IIG PNAGKST + AK I TT +P G+ G + +L D PGI + Sbjct: 24 AIIGAPNAGKSTLTNRLVGAKVSIVTQKVQTTRFPVRGVAIAGDAQIVLVDTPGIFQPRR 83 Query: 222 QGAGIGDRFLKH-----TERTHVLLHIVSA--------LEENVQAAYQCILDELSAYNSE 268 + DR + E ++H+V A + QA I++ L + Sbjct: 84 R----LDRAMVRAAWGGAEDADAVVHLVDAAAQLGDKPADRKAQADVDSIVEGLKKSGRK 139 Query: 269 LRKKIEIVGLSQIDTVDSDTLAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 + I+ L++ID V + L K T F S+ +G G+ E L ++ Sbjct: 140 V-----ILALNKIDAVKREALLDISKTLFDTGVYDEVFMVSATSGSGV----EDLKARLA 190 Query: 328 SIRGENEF 335 ++ +N + Sbjct: 191 ALMPDNPW 198 >gi|17987156|ref|NP_539790.1| GTP-binding protein HFLX [Brucella melitensis bv. 1 str. 16M] gi|17982822|gb|AAL52054.1| gtp-binding protein hflx [Brucella melitensis bv. 1 str. 16M] Length = 505 Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKS +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 268 VALVGYTNAGKSMLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNL 327 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ ++LH+ + + A + + + L+ E + +V + Sbjct: 328 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 387 Query: 279 SQIDTVDSDTLARKKNELA--TQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A ++ G+ P S+ITG G+ ++L + +I Sbjct: 388 NKIDNLDESAREAALRLAAAGSEEGR-PIPVSAITGEGVDRLLSLIETRI 436 >gi|126175188|ref|YP_001051337.1| GTP-binding protein EngA [Shewanella baltica OS155] gi|166225854|sp|A3D6V5|DER_SHEB5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|125998393|gb|ABN62468.1| small GTP-binding protein [Shewanella baltica OS155] Length = 488 Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L + A + AA I L + R+K Sbjct: 60 IDGTEEGIETKMAEQSLAAIEEADVVLFMTDA-RAGLTAADLSIAQHLRS-----REKTT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V +++D +D+D+ + L G+V ++ ++ G G+ ++E Sbjct: 114 FVVANKVDGIDADSACAEFWSLG--LGEV-YQMAASQGRGVTNMIE 156 Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 31/192 (16%) Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTT---LYPNLGIVKE 203 Q+++ L +KL IIG PN GKST + + + D P TT +Y + + +E Sbjct: 191 QKRLQDLPIKL----AIIGKPNVGKSTLTNRILGEERVVVFDEPGTTRDSIY--IPMERE 244 Query: 204 GYKEFILADIPGIIKNA--HQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQ 256 G +E+++ D G+ + + HQ + ++F LK E +V+L I+ A E + Sbjct: 245 G-REYVIIDTAGVRRRSKVHQ---VIEKFSVIKTLKAVEDANVVLLIIDAREGIAEQDLG 300 Query: 257 CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITG 312 + L+A + ++ +++ D +D R K+EL + G + F S++ G Sbjct: 301 LLGFALNA------GRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHG 354 Query: 313 HGIPQILECLHD 324 G+ + E + + Sbjct: 355 TGVGHLFESIEE 366 >gi|326437102|gb|EGD82672.1| GTP binding protein 4 [Salpingoeca sp. ATCC 50818] Length = 679 Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 14/180 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA ++ Y FTT +G Y + + D PGI+ + Sbjct: 175 VTGFPNVGKSSFVNKVTRADVEVQPYAFTTKSLFVGHTDYQYLRWQVIDTPGILDHP--- 231 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + R + L H+ + + + + QC + + S + + KK + Sbjct: 232 --LEQRNTIEMQAITALAHLRACVLYVMDLSQQCGFTVEQQFSLFENIKPLFAKKPLAII 289 Query: 278 LSQIDTV---DSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 +++ DT+ D+ +++ + G S++T G+ Q+ DK+ + R E++ Sbjct: 290 VNKADTMKIEDAPAEVQERLKAYEAEGISVLSMSTLTEEGVAQVKNAACDKLMTYRIESK 349 >gi|319939220|ref|ZP_08013583.1| GTP-binding protein Era [Streptococcus anginosus 1_2_62CV] gi|319811616|gb|EFW07892.1| GTP-binding protein Era [Streptococcus anginosus 1_2_62CV] Length = 299 Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDQEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +VSA +EN I++ L + ++ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVSA-DENRGKGDDMIMERLKVAKVPV-----VL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + +++ L + + Sbjct: 119 VINKIDKVHPDQLLSQIDDYRKQMDFKEVVP--ISALQGNNVSHLVDILSENL 169 >gi|312796099|ref|YP_004029021.1| GTP-binding protein hflX [Burkholderia rhizoxinica HKI 454] gi|312167874|emb|CBW74877.1| GTP-binding protein hflX [Burkholderia rhizoxinica HKI 454] Length = 415 Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 20/176 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKN- 219 + ++G NAGKST ++T+A+ AD F TL V G +++D G I++ Sbjct: 193 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGEAGNVVVSDTVGFIRDL 252 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK-----KIE 274 HQ L+ T +LLHIV AA D++ N LR+ + Sbjct: 253 PHQLVAAFRATLEETVHADLLLHIVD-------AASAVRADQIEQVNDVLREIGAASIPQ 305 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILECLHDKIFSI 329 I+ ++ID V + +R + G + F S+ TG G L+ L D + + Sbjct: 306 ILVFNKIDQV-PELASRADRVERNEYGNITRVFLSARTGQG----LDALRDAVAEV 356 >gi|90408609|ref|ZP_01216764.1| GTP-binding protein EngA [Psychromonas sp. CNPT3] gi|90310301|gb|EAS38431.1| GTP-binding protein EngA [Psychromonas sp. CNPT3] Length = 488 Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 13/170 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST +TR + +AD+P T G K EFI+ D GI + Sbjct: 5 IALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLDEDEFIVIDTGGITGDE 64 Query: 221 H--QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 G L E VL + + + + A Q I D L KK+ IV Sbjct: 65 EGIDSLMAGQSLLAIDEADAVLFMVDARV--GLMVADQAIADHLRKQE----KKVFIVA- 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 ++ D +D+D+ + L G+V + ++ G G+ ++++ D F Sbjct: 118 NKTDGIDADSACAEFYALG--LGEV-YHIAAAHGKGVRKMIDTALDGFFD 164 >gi|99081196|ref|YP_613350.1| GTP-binding protein, HSR1-related [Ruegeria sp. TM1040] gi|99037476|gb|ABF64088.1| GTP-binding protein HSR1-related [Ruegeria sp. TM1040] Length = 423 Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 14/175 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKN 219 + ++G NAGKST +T A+ D F TL P + V+ +G E IL+D G I + Sbjct: 205 VALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVELPDG-PEVILSDTVGFISD 263 Query: 220 AHQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN-SELRKKIEIVG 277 R L+ V+LH+ + + + + LS+ E R IE+ Sbjct: 264 LPTELVASFRATLEEVLAADVILHVRDISHSDTEHQAEDVEQILSSLGVDEDRTVIEVWN 323 Query: 278 -LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRG 331 + Q+ ++D ++ + + S+ITG G+PQ+ LHD ++G Sbjct: 324 KIDQLSEEEADACRQRADR-----NDSLYAISAITGEGLPQL---LHDIAMKLQG 370 >gi|307545609|ref|YP_003898088.1| GTP-binding protein Era [Halomonas elongata DSM 2581] gi|307217633|emb|CBV42903.1| GTP-binding protein Era [Halomonas elongata DSM 2581] Length = 299 Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST + + K I P TT + +GI EG +FI D PGI Sbjct: 8 VAIVGRPNVGKSTLMNHILGQKISITSRRPQTTRHQVMGIKTEGDAQFIYVDTPGI 63 >gi|296863478|pdb|3K53|A Chain A, Crystal Structure Of Nfeob From P. Furiosus gi|296863479|pdb|3K53|B Chain B, Crystal Structure Of Nfeob From P. Furiosus gi|296863480|pdb|3K53|C Chain C, Crystal Structure Of Nfeob From P. Furiosus gi|296863481|pdb|3K53|D Chain D, Crystal Structure Of Nfeob From P. Furiosus Length = 271 Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 36/59 (61%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GK+T ++T + + ++P T+ GI++ KEF++ D+PGI Sbjct: 2 VLKTVALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGIMEYREKEFLVVDLPGI 60 >gi|270013133|gb|EFA09581.1| hypothetical protein TcasGA2_TC011698 [Tribolium castaneum] Length = 198 Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 25/36 (69%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN 197 +GI+G+PN GKSTF +T++ ++PF T+ PN Sbjct: 140 VGIVGIPNVGKSTFFNVLTKSSAAAENFPFCTIDPN 175 >gi|218133163|ref|ZP_03461967.1| hypothetical protein BACPEC_01025 [Bacteroides pectinophilus ATCC 43243] gi|217992036|gb|EEC58040.1| hypothetical protein BACPEC_01025 [Bacteroides pectinophilus ATCC 43243] Length = 437 Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 9/165 (5%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKN-A 220 I+G NAGKST L +T A D F TL P +V +L D G I+ Sbjct: 212 AIVGYTNAGKSTLLNRLTDADVLSEDKLFATLDPTTRELVLTDKSRVLLTDTVGFIRKLP 271 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H L+ +++H+V A ++++ + + D L E+ K I ++ Sbjct: 272 HHLIDAFRSTLEEARYADIIVHVVDASNDDMERQMEIVYDTLQEL--EVGDKPVITLFNK 329 Query: 281 IDTVD-SDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 D +D +D+ A+ ++ A + + S+ TG G+ + E L D Sbjct: 330 CDMLDMTDSSAKPRDFKADKTVYI----SAKTGQGLDEFEEALGD 370 >gi|301300995|ref|ZP_07207158.1| GTP-binding protein Era [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851411|gb|EFK79132.1| GTP-binding protein Era [Lactobacillus salivarius ACS-116-V-Col5a] Length = 300 Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 9/164 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 + I+G PN GKSTFL V K I +D TT GI E + + D PGI K + Sbjct: 10 VAILGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGIYTEDDAQIVFIDTPGIHKPH 69 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + G + + L +L +V+A ++ + I++ L ++K I +V ++ Sbjct: 70 SRLGDFMVESALSTLNEVDAVLFMVNATQKRGRGD-DFIIERL----KNVKKPIYLV-IN 123 Query: 280 QIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECL 322 +ID + D L + ++ F S++ G+ P+++E L Sbjct: 124 KIDQIHPDKLLQIMDDYRNTLDYAEVFPISALEGNNCPELIESL 167 >gi|120598182|ref|YP_962756.1| GTP-binding protein EngA [Shewanella sp. W3-18-1] gi|166225859|sp|A1RHQ7|DER_SHESW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|120558275|gb|ABM24202.1| small GTP-binding protein [Shewanella sp. W3-18-1] Length = 488 Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L + A + AA I L + R+K Sbjct: 60 IDGTEEGIETKMAEQSLAAIEEADVVLFMTDA-RAGLTAADLSIAQHLRS-----REKTT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V +++D +D+D+ + L G+V ++ ++ G G+ ++E Sbjct: 114 FVVANKVDGIDADSACAEFWSLG--LGEV-YQMAASQGRGVTNMIE 156 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 31/192 (16%) Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTT---LYPNLGIVKE 203 Q+++ L +KL IIG PN GKST + + + D P TT +Y + + +E Sbjct: 191 QKRLQDLPIKL----AIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIY--IPMERE 244 Query: 204 GYKEFILADIPGIIKNA--HQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQ 256 G +E+++ D G+ + + HQ + ++F LK E +V+L I+ A E + Sbjct: 245 G-REYVIIDTAGVRRRSKVHQ---VIEKFSVIKTLKAVEDANVVLLIIDAREGVAEQDLG 300 Query: 257 CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITG 312 + L+A + ++ +++ D +D R K+EL + G + F S++ G Sbjct: 301 LLGFALNA------GRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHG 354 Query: 313 HGIPQILECLHD 324 G+ + E + + Sbjct: 355 TGVGHLFESIEE 366 >gi|95930678|ref|ZP_01313412.1| GTP-binding protein Era [Desulfuromonas acetoxidans DSM 684] gi|95133330|gb|EAT14995.1| GTP-binding protein Era [Desulfuromonas acetoxidans DSM 684] Length = 303 Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 27/177 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I A+ P TT LGI E + + D PGI Sbjct: 16 VSIVGRPNVGKSTLLNQILGQKIAITANKPQTTRNRILGIHSEDNAQVLFLDTPGI---- 71 Query: 221 HQGAG-----IGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 H+ G + D+ L V++ +V A + V ILD L+ + + + Sbjct: 72 HKATGKLNQYMVDQALSACRGVDVVVFLVEA-TDRVGGGDDFILDVLAQSDIPV-----V 125 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEF------SSITGHGIPQILECLHDKI 326 + ++++D V+ D L + A + F+F S++ G G+ +++ + D + Sbjct: 126 LVINKVDLVEKDKLLPLIAQYAER-----FDFKEIIPLSALNGSGVERLVASVRDML 177 >gi|302385384|ref|YP_003821206.1| ferrous iron transport protein B [Clostridium saccharolyticum WM1] gi|302196012|gb|ADL03583.1| ferrous iron transport protein B [Clostridium saccharolyticum WM1] Length = 727 Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 14/159 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K G+K+ I+ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLK-GHKDVIIMDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R TER +L+IV + +E N+ + Q + EL + I+ + Sbjct: 64 YTLEEVVARNYLITERPDAILNIVDGTNIERNLYLSTQLM---------ELGIPV-IMAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQ 317 + +D V+ + +L+ + G E S++ G GI + Sbjct: 114 NMMDIVEKNGDKIHIQKLSQKLGCEVVEISALKGTGIQE 152 >gi|228476104|ref|ZP_04060812.1| GTP-binding protein Era [Staphylococcus hominis SK119] gi|314936312|ref|ZP_07843659.1| GTP-binding protein Era [Staphylococcus hominis subsp. hominis C80] gi|228269927|gb|EEK11407.1| GTP-binding protein Era [Staphylococcus hominis SK119] gi|313654931|gb|EFS18676.1| GTP-binding protein Era [Staphylococcus hominis subsp. hominis C80] Length = 299 Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 11/167 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G++ + I D PGI K Sbjct: 9 VSIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTREDAQIIFLDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H+ R K+T + + + E++ + I++ L + + + L++ Sbjct: 69 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVKTPV-----FLVLNK 123 Query: 281 IDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHD 324 ID V D L K + T VP S++ G + ++ L D Sbjct: 124 IDLVHPDALMPKIEKYKTYMDFTEIVP--ISALEGLNVDHFIDVLKD 168 >gi|90961872|ref|YP_535788.1| GTP-binding protein Era [Lactobacillus salivarius UCC118] gi|122449031|sp|Q1WTU6|ERA_LACS1 RecName: Full=GTPase Era gi|90821066|gb|ABD99705.1| GTP-binding protein [Lactobacillus salivarius UCC118] gi|300214599|gb|ADJ79015.1| Like GTP-binding protein [Lactobacillus salivarius CECT 5713] Length = 300 Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 9/164 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 + I+G PN GKSTFL V K I +D TT GI E + + D PGI K + Sbjct: 10 VAILGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGIYTEDDAQIVFIDTPGIHKPH 69 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + G + + L +L +V+A ++ + I++ L ++K I +V ++ Sbjct: 70 SRLGDFMVESALSTLNEVDAVLFMVNATQKRGRGD-DFIIERL----KNVKKPIYLV-IN 123 Query: 280 QIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECL 322 +ID + D L + ++ F S++ G+ P+++E L Sbjct: 124 KIDQIHPDKLLQIMDDYRNTLDYAEVFPISALEGNNCPELIESL 167 >gi|146293744|ref|YP_001184168.1| GTP-binding protein EngA [Shewanella putrefaciens CN-32] gi|166225857|sp|A4Y8T6|DER_SHEPC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|145565434|gb|ABP76369.1| small GTP-binding protein [Shewanella putrefaciens CN-32] gi|319427118|gb|ADV55192.1| ribosome-associated GTPase EngA [Shewanella putrefaciens 200] Length = 488 Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L + A + AA I L + R+K Sbjct: 60 IDGTEEGIETKMAEQSLAAIEEADVVLFMTDA-RAGLTAADLSIAQHLRS-----REKTT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V +++D +D+D+ + L G+V ++ ++ G G+ ++E Sbjct: 114 FVVANKVDGIDADSACAEFWSLG--LGEV-YQMAASQGRGVTNMIE 156 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 31/192 (16%) Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTT---LYPNLGIVKE 203 Q+++ L +KL IIG PN GKST + + + D P TT +Y + + +E Sbjct: 191 QKRLQDLPIKL----AIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIY--IPMERE 244 Query: 204 GYKEFILADIPGIIKNA--HQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQ 256 G +E+++ D G+ + + HQ + ++F LK E +V+L I+ A E + Sbjct: 245 G-REYVIIDTAGVRRRSKVHQ---VIEKFSVIKTLKAVEDANVVLLIIDAREGVAEQDLG 300 Query: 257 CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITG 312 + L+A + ++ +++ D +D R K+EL + G + F S++ G Sbjct: 301 LLGFALNA------GRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHG 354 Query: 313 HGIPQILECLHD 324 G+ + E + + Sbjct: 355 TGVGHLFESIEE 366 >gi|209522807|ref|ZP_03271365.1| GTP-binding proten HflX [Arthrospira maxima CS-328] gi|209496856|gb|EDZ97153.1| GTP-binding proten HflX [Arthrospira maxima CS-328] Length = 602 Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 13/146 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGI---VKEGYKEFILAD 212 + + I+G NAGKST L +T ++ AD F TL P L I + E + ++ D Sbjct: 428 VPTLAIVGYTNAGKSTLLNVLTASEIYAADQLFATLDPTSRRLTIPDAITEEPQNIVITD 487 Query: 213 IPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 G I + D F L+ LLH+V QA Q +++ L+ + Sbjct: 488 TVGFIHEL--PPALIDAFRATLEEVTDADALLHLVDLSHPAWQAQIQSVMEILT--QMPI 543 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNE 295 ++ ++ID+VD +TL + E Sbjct: 544 TPGPALLAFNKIDSVDGETLRFAQEE 569 >gi|114706261|ref|ZP_01439163.1| GTP-binding protein Era [Fulvimarina pelagi HTCC2506] gi|114538122|gb|EAU41244.1| GTP-binding protein Era [Fulvimarina pelagi HTCC2506] Length = 318 Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 31/175 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI---- 216 + +IG PNAGKST + + K I + TT GI + + + D PG+ Sbjct: 29 VALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIAIKDRTQIVFVDTPGVFSPR 88 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 +K A GA D +LL IV A E V + IL+ L Sbjct: 89 RRLDRAMVKTAWSGAKDAD----------ILLAIVDA-ERGVSPELELILERLKDV---- 133 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQC--GQVPFEFSSITGHGIPQILECL 322 ++ +++ L++ID + D L ++ + QV F S++ G G ++ L Sbjct: 134 -RQTKVLLLNKIDRIKRDKLLGLTQQIVDKVVFDQV-FMISALDGSGCKDLMTWL 186 >gi|302825014|ref|XP_002994144.1| hypothetical protein SELMODRAFT_138238 [Selaginella moellendorffii] gi|300138020|gb|EFJ04805.1| hypothetical protein SELMODRAFT_138238 [Selaginella moellendorffii] Length = 673 Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I I G PN GKS+F+ +TRA + Y FTT +G Y + + D PGI+ Sbjct: 171 ILICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRWQVIDTPGIL 226 >gi|197105188|ref|YP_002130565.1| GTP-binding protein HflX [Phenylobacterium zucineum HLK1] gi|196478608|gb|ACG78136.1| GTP-binding protein HflX [Phenylobacterium zucineum HLK1] Length = 424 Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 3/163 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + ++G NAGKST +T+A+ D F TL P L ++K + IL+D G I + Sbjct: 194 VALVGYTNAGKSTLFNRLTQAEVLAQDMLFATLDPTLRMLKLPDGRPAILSDTVGFISDL 253 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H+ L+ V+LH+ E +A Q + L ++ ++ + + Sbjct: 254 PHELVEAFRATLEEVREADVVLHVRDIASEETEAQAQDVRTVLQRLGVDMDERRILEVWN 313 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 ++D + +D + A + S++TG G +L + Sbjct: 314 KVDLLPADERQDAAGD-ARRAHPPAILVSAVTGEGCDDLLRAV 355 >gi|119511840|ref|ZP_01630940.1| GTP-binding protein [Nodularia spumigena CCY9414] gi|119463482|gb|EAW44419.1| GTP-binding protein [Nodularia spumigena CCY9414] Length = 521 Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust. Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 35/157 (22%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKE----GYKEFILAD 212 + + ++G NAGKST L ++T A+ AD F TL P ++ + G +E +L D Sbjct: 347 VPSVALVGYTNAGKSTLLNALTNAEVYTADQLFATLDPTTRRLVIADGDTGGTQEILLTD 406 Query: 213 IPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS--AYNSELR 270 G I A + D F + LEE +A L +LS A+ S +R Sbjct: 407 TVGFIHEL--PASLMDAFR-------------ATLEEVTEADALLHLVDLSHPAWLSHIR 451 Query: 271 KKIEIVG------------LSQIDTVDSDTLARKKNE 295 EI+ ++ID VDS TLA + E Sbjct: 452 SVREILAQMPVTPGPALVIFNKIDQVDSATLAIAQEE 488 >gi|116053092|ref|YP_793411.1| putative GTP-binding protein [Pseudomonas aeruginosa UCBPP-PA14] gi|218894038|ref|YP_002442907.1| putative GTP-binding protein [Pseudomonas aeruginosa LESB58] gi|254244166|ref|ZP_04937488.1| hypothetical protein PA2G_05009 [Pseudomonas aeruginosa 2192] gi|296391783|ref|ZP_06881258.1| GTP-binding protein HflX [Pseudomonas aeruginosa PAb1] gi|313109944|ref|ZP_07795872.1| putative GTP-binding protein [Pseudomonas aeruginosa 39016] gi|115588313|gb|ABJ14328.1| putative GTP-binding protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126197544|gb|EAZ61607.1| hypothetical protein PA2G_05009 [Pseudomonas aeruginosa 2192] gi|218774266|emb|CAW30083.1| probable GTP-binding protein [Pseudomonas aeruginosa LESB58] gi|310882374|gb|EFQ40968.1| putative GTP-binding protein [Pseudomonas aeruginosa 39016] Length = 433 Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 2/103 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T ++ A+ F TL P L ++ + +LAD G I Sbjct: 198 IPAVSLVGYTNAGKSTLFNALTASEVYAANQLFATLDPTLRRLQLDDLGPVVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL 259 ++ H+ L+ + +LLH++ A E A + +L Sbjct: 258 RHLPHKLVEAFRATLEESSNADLLLHVIDAYEPERDAQVEQVL 300 >gi|256044768|ref|ZP_05447672.1| GTP-binding protein HFLX [Brucella melitensis bv. 1 str. Rev.1] gi|260565630|ref|ZP_05836114.1| GTP1/OBG [Brucella melitensis bv. 1 str. 16M] gi|265991191|ref|ZP_06103748.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|260151698|gb|EEW86792.1| GTP1/OBG [Brucella melitensis bv. 1 str. 16M] gi|263001975|gb|EEZ14550.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] Length = 472 Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKS +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 235 VALVGYTNAGKSMLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNL 294 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ ++LH+ + + A + + + L+ E + +V + Sbjct: 295 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 354 Query: 279 SQIDTVDSDTLARKKNELA--TQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D A ++ G+ P S+ITG G+ ++L + +I Sbjct: 355 NKIDNLDESAREAALRLAAAGSEEGR-PIPVSAITGEGVDRLLSLIETRI 403 >gi|228472569|ref|ZP_04057329.1| GTP-binding protein Era [Capnocytophaga gingivalis ATCC 33624] gi|228275982|gb|EEK14738.1| GTP-binding protein Era [Capnocytophaga gingivalis ATCC 33624] Length = 293 Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 12/145 (8%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST L A V I TT + GIV + + +D PGIIK A Sbjct: 8 VNIIGNPNVGKSTLLNALVGERLSIITSKAQTTRHRIFGIVSGDDFQVVFSDTPGIIKPA 67 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 +Q F+K E +L+++V E+ ++ A D N K +V ++ Sbjct: 68 YQLQNSMMDFVKDAFEDADILIYMVEIGEKELKDA-----DFFRKINQA--KVPVLVLIN 120 Query: 280 QIDTVDSDTLARKKNELATQCGQVP 304 +ID D +T+ K +A QVP Sbjct: 121 KIDRSDEETV---KQAVAYWQQQVP 142 >gi|74316620|ref|YP_314360.1| GTP-binding protein HflX [Thiobacillus denitrificans ATCC 25259] gi|74056115|gb|AAZ96555.1| GTP-binding protein HflX [Thiobacillus denitrificans ATCC 25259] Length = 389 Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 14/114 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL--------YPNLGIVKE-GYKEFI 209 + + ++G NAGKST ++TRA AD F TL P L E G E + Sbjct: 197 VLSVALVGYTNAGKSTLFNALTRAGTYAADQLFATLDTTTRKIFLPRLADADEPGSGEVV 256 Query: 210 LADIPGIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCI 258 L+D G I H L+ T +LLH++ A E ++A Q + Sbjct: 257 LSDTVGFITRLPHDLVAAFRATLEATAEADLLLHVIDASSPVRERQIEAVDQVL 310 >gi|89094657|ref|ZP_01167594.1| probable GTP-binding protein [Oceanospirillum sp. MED92] gi|89081127|gb|EAR60362.1| probable GTP-binding protein [Oceanospirillum sp. MED92] Length = 418 Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST ++T ++ AD F TL P L ++ E + ILAD G I Sbjct: 182 VPTLSLVGYTNAGKSTLFNALTTSEVYAADQLFATLDPTLRRIEVEDIGQAILADTVGFI 241 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIV 244 ++ H+ L+ T +LLH++ Sbjct: 242 RHLPHKLVEAFRATLQETIEATLLLHVI 269 >gi|227890898|ref|ZP_04008703.1| GTP-binding protein Era [Lactobacillus salivarius ATCC 11741] gi|227867307|gb|EEJ74728.1| GTP-binding protein Era [Lactobacillus salivarius ATCC 11741] Length = 300 Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 9/164 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 + I+G PN GKSTFL V K I +D TT GI E + + D PGI K + Sbjct: 10 VAILGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGIYTEDDAQIVFIDTPGIHKPH 69 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + G + + L +L +V+A ++ + I++ L ++K I +V ++ Sbjct: 70 SRLGDFMVESALSTLNEVDAVLFMVNATQKRGRGD-DFIIERL----RNVKKPIYLV-IN 123 Query: 280 QIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECL 322 +ID + D L + ++ F S++ G+ P+++E L Sbjct: 124 KIDQIHPDKLLQIMDDYRNTLDYAEVFPISALEGNNCPELIESL 167 >gi|260881589|ref|ZP_05404771.2| GTP-binding protein Era [Mitsuokella multacida DSM 20544] gi|260848446|gb|EEX68453.1| GTP-binding protein Era [Mitsuokella multacida DSM 20544] Length = 323 Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 14/133 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I +IG PN GKST + ++ K I +D P TT L I+ E + + D PGI K Sbjct: 34 IAVIGRPNVGKSTLINTLIGQKIAIMSDKPQTTQNRILCILTEPDAQIVFLDTPGIHKPK 93 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +G+ +K E T +L +V A E+ Y IL+ L A + + I+ Sbjct: 94 HK---LGEYMVKAAEGTLKEVDAILFVVDATEKMGPGEY-YILERLQATSKPV-----IL 144 Query: 277 GLSQIDTVDSDTL 289 ++++D ++ + + Sbjct: 145 VVNKLDLIEKEQV 157 >gi|292492503|ref|YP_003527942.1| small GTP-binding protein [Nitrosococcus halophilus Nc4] gi|291581098|gb|ADE15555.1| small GTP-binding protein [Nitrosococcus halophilus Nc4] Length = 464 Score = 42.4 bits (98), Expect = 0.099, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 21/128 (16%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 A + ++G PN GKST +TR++ +AD P T GI + G + F++ D GI Sbjct: 3 ALVALVGRPNVGKSTLFNRLTRSRDALVADQPGVTRDRKYGIARYGEQSFLVVDTGGI-- 60 Query: 219 NAHQGAGIGDRFLKHT----ERTHVLLHIV------SALEENV-------QAAYQCILDE 261 Q +G+G+ E ++L +V SAL+E + Q + ++++ Sbjct: 61 -TEQESGVGELMRVQAQLAIEEADIILFLVDGREGLSALDETIAEQLRRAQKPLKLVINK 119 Query: 262 LSAYNSEL 269 + EL Sbjct: 120 TEGRDQEL 127 >gi|332975861|gb|EGK12739.1| GTP-binding protein Era [Desmospora sp. 8437] Length = 300 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 14/133 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PN GKST L V K I +D P TT G+ ++ I D PGI K Sbjct: 11 VTLIGRPNVGKSTLLNQVLGQKVAIMSDKPQTTRNKIRGVYTTEAEQIIFLDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + +GD ++ E V+L +V A +E + + I+++L A + + + Sbjct: 71 SR---LGDWMVQTARETFEEVDVILFLVDA-KEGMGPGDRFIMEQLKAVKTPV-----FL 121 Query: 277 GLSQIDTVDSDTL 289 +++ID V DTL Sbjct: 122 VVNKIDQVHPDTL 134 >gi|307243626|ref|ZP_07525769.1| ferrous iron transport protein B [Peptostreptococcus stomatis DSM 17678] gi|306492995|gb|EFM65005.1| ferrous iron transport protein B [Peptostreptococcus stomatis DSM 17678] Length = 716 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 78/163 (47%), Gaps = 14/163 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GKST ++T + + ++P T+ G+ K+ KE + D+PGI + Sbjct: 5 IALAGNPNCGKSTLFNALTGSNQYVGNWPGVTVEKKGGVYKKD-KEVNITDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ V++ ++ A +E N+ A Q SE+ + ++ L Sbjct: 64 YTLEEVVSREYLINEKPDVIVDVIDASNIERNLYLATQL---------SEIGIPM-VLAL 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 + +D V+ + ++L+ + G E S++ G I +++E Sbjct: 114 NMMDVVEKNGDKIDTDKLSQEFGYPVVEISALRGKNIDKVIEV 156 >gi|300934024|ref|ZP_07149280.1| bifunctional cytidylate kinase/GTP-binding protein [Corynebacterium resistens DSM 45100] Length = 811 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 69/178 (38%), Gaps = 25/178 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKS+ L VT + + D TT+ P IV+ + D GI K Sbjct: 552 VALVGRPNVGKSSLLNKVTGEERSVVDNVAGTTVDPVDSIVELDEHTWRFVDTAGIRKKT 611 Query: 221 HQGAG----IGDRFLKHTERTHVLLHIVSALE---ENVQAAYQCILDELSAYNSELRKKI 273 G R + V + +V A E E Q + ILD A Sbjct: 612 KTARGHEFYASLRTRAAIDAAEVAIFLVDASEPIAEQDQRVLRLILDSGKAL-------- 663 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPF----EFSSITGHGI----PQILECLH 323 +V ++ D VD D + E+ Q VP+ S+ TG + P ++E L Sbjct: 664 -VVAYNKWDLVDEDRRWELEREIDLQLAHVPWARRVNISAKTGRALKKLEPAMVEALE 720 >gi|254481040|ref|ZP_05094286.1| GTP-binding proten HflX [marine gamma proteobacterium HTCC2148] gi|214038835|gb|EEB79496.1| GTP-binding proten HflX [marine gamma proteobacterium HTCC2148] Length = 436 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 24/182 (13%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADI 213 K + I + ++G NAGKST +T + AD F TL P L ++ E +LAD Sbjct: 207 KRQEIPTVSLVGYTNAGKSTLFNYITDSGVYAADQLFATLDPTLRRLELENVGPVVLADT 266 Query: 214 PGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVSAL----EENVQAAYQCILDELSAYN 266 G I AH + + F L+ T +LLH++ A E+N+ ++ +L E+ A Sbjct: 267 VGFI--AHLPHKLVEAFKATLEETLNADLLLHVIDAASDEREDNIYQVHE-VLQEIGAD- 322 Query: 267 SELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHD 324 EI L + +D L +K + +P S+ TG G+ +L+ + + Sbjct: 323 -------EIPRLEIYNKLD---LLEQKPRIDRNADGIPERVWLSAATGDGVSLLLQAVSE 372 Query: 325 KI 326 + Sbjct: 373 VV 374 >gi|289423352|ref|ZP_06425160.1| ferrous iron transport protein B [Peptostreptococcus anaerobius 653-L] gi|289156283|gb|EFD04940.1| ferrous iron transport protein B [Peptostreptococcus anaerobius 653-L] Length = 719 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 81/164 (49%), Gaps = 18/164 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN+GKST ++T + + ++P T+ G+ K+ KE + D+PGI + Sbjct: 5 IALAGNPNSGKSTLFNALTGSNQYVGNWPGVTVEKKTGVYKKD-KEVNITDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ V++++V A +E N+ + Q SE+ + I+ L Sbjct: 64 YTLEEVVSREYLLKEKPDVIVNVVDASNIERNLYLSTQL---------SEIGIPM-ILAL 113 Query: 279 SQIDTVD--SDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V+ +D++ K + C V E S++ G I +++E Sbjct: 114 NMMDIVEKNNDSIDIVKLSQSLDCPVV--EISALKGKNIDKVIE 155 >gi|328851378|gb|EGG00533.1| hypothetical protein MELLADRAFT_93205 [Melampsora larici-populina 98AG31] Length = 701 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 30/54 (55%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + G PN GKS+F+ VTRA + Y FTT +G + Y + + D PGI+ Sbjct: 173 VCGYPNVGKSSFMNKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVIDTPGIL 226 >gi|225388302|ref|ZP_03758026.1| hypothetical protein CLOSTASPAR_02037 [Clostridium asparagiforme DSM 15981] gi|225045649|gb|EEG55895.1| hypothetical protein CLOSTASPAR_02037 [Clostridium asparagiforme DSM 15981] Length = 724 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 14/159 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T +T + + ++P T+ G +K G KE I+ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNGLTGSNQFVGNWPGVTVEKKEGRLK-GNKEVIIMDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R TER V+L+IV + LE N+ + Q + EL + ++ + Sbjct: 64 YTLEEVVARNYLITERPDVILNIVDGTNLERNLYLSTQLM---------ELGIPV-LMAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQ 317 + +D V +L+ + G E S++ G GI + Sbjct: 114 NMMDIVKKSGDEINIGQLSKKLGCPVVEISALKGTGIME 152 >gi|330969066|gb|EGH69132.1| GTP-binding protein Der [Pseudomonas syringae pv. aceris str. M302273PT] Length = 490 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 11/166 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR + I D T G K + +IL D GI Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60 Query: 217 IKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + H + ++ L E V+L +V A +A Y D++ + R K Sbjct: 61 SGDEHGMDEKMAEQSLLAIEEADVVLFLVDA-----RAGYTA-ADQMIGEHLRKRNKRSY 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 V ++ID +D + LAR + +P + G GI Q+LE Sbjct: 115 VVANKIDNID-ENLARAEFSPMGLGDAIP--VAGGHGRGISQMLEI 157 >gi|323491635|ref|ZP_08096814.1| GTP-binding protein Der [Vibrio brasiliensis LMG 20546] gi|323314211|gb|EGA67296.1| GTP-binding protein Der [Vibrio brasiliensis LMG 20546] Length = 494 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 17/169 (10%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G K G EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK--K 272 I +G + + L + V+L +V + AA + I S LRK K Sbjct: 60 IDGTEEGVETKMAQQSLAAIDEADVVLFMVDG-RAGLTAADEAIA-------SHLRKIEK 111 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 ++ ++++D +D+D + + +L + ++ ++ G G+ +++ Sbjct: 112 PSMLVVNKVDGIDADAASAEFWQLGVENM---YQIAAAHGRGVTALIDL 157 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRT 267 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK E +V++ ++ A E + L+A S ++ Sbjct: 268 RINETVEKFSVVKTLKAVEDANVVMLVIDARENISDQDLSLLGFALNAGRS------IVI 321 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D D + K EL + G V F S++ G G+ + E + + Sbjct: 322 AVNKWDGLDMDVKEQVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 373 >gi|323493317|ref|ZP_08098440.1| ferrous iron transport protein B [Vibrio brasiliensis LMG 20546] gi|323312403|gb|EGA65544.1| ferrous iron transport protein B [Vibrio brasiliensis LMG 20546] Length = 758 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 17/136 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I +G PN+GK+T +T AK ++ ++ T+ G EF+L D+PGI + + Sbjct: 5 ILTVGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGKYTHSSDEFLLTDLPGIYALDS 64 Query: 220 AHQGAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQ---------CILDELSAY 265 + G I + TH +++++V A LE ++ Q +L+++ A Sbjct: 65 GNDGNSIDESIASRAVLTHPADLIINVVDATSLERSLYMTLQLRELGRPMIVVLNKMDAL 124 Query: 266 NSELRKKIEIVGLSQI 281 E R+ I+I L ++ Sbjct: 125 KRE-RQTIDIKALEKM 139 >gi|310828430|ref|YP_003960787.1| hypothetical protein ELI_2843 [Eubacterium limosum KIST612] gi|308740164|gb|ADO37824.1| hypothetical protein ELI_2843 [Eubacterium limosum KIST612] Length = 304 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 14/135 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I IIG PN GKST L S+ K I A+ P TT I + + + D PG+ K Sbjct: 16 ISIIGRPNVGKSTLLNSIMGEKLVITANKPQTTRNAIRCIHTDADSQMVFIDTPGMHKPK 75 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ +G LK E T V+L +V E+ + Q ILD+L+ + + ++ Sbjct: 76 NK---LGAFMLKSAEDTISDVDVVLFLVEP-EDRIGPGDQYILDKLAGSRTPV-----LL 126 Query: 277 GLSQIDTVDSDTLAR 291 +++IDTV + L + Sbjct: 127 IINKIDTVPKEELLK 141 >gi|296122942|ref|YP_003630720.1| ferrous iron transport protein B [Planctomyces limnophilus DSM 3776] gi|296015282|gb|ADG68521.1| ferrous iron transport protein B [Planctomyces limnophilus DSM 3776] Length = 780 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 17/163 (10%) Query: 154 LKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADI 213 L + + + ++G PN GKST +++T + ++P T+ LG +K +E +L D+ Sbjct: 3 LAVDRVPHLAVVGNPNTGKSTLFSALTGIFTRTGNFPGVTVEMKLGRLKTSTREAVLVDL 62 Query: 214 PGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA-YNSELRKK 272 PG A + A ER V + + E A CI+D + N L + Sbjct: 63 PGTYSLAARSAD---------ERVTVDVLLGLRPEIGSLAGALCIVDGTNLERNLYLFSQ 113 Query: 273 IEIVGL------SQIDTVDSDTLARKKNELATQCGQVPFEFSS 309 + +GL + ID + +A + EL+ + G VP F + Sbjct: 114 VRDLGLPVLLIVNMIDRAEKAGIAITEPELSQRLG-VPVVFCN 155 >gi|226939621|ref|YP_002794694.1| HflX [Laribacter hongkongensis HLHK9] gi|226714547|gb|ACO73685.1| HflX [Laribacter hongkongensis HLHK9] Length = 284 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 10/122 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKN- 219 + I+G NAGKST ++T+A+ AD F TL + + +L+D G I++ Sbjct: 119 VSIVGYTNAGKSTLFNALTKARAYAADQLFATLDTTSRRLYLNEQLSVVLSDTVGFIRDL 178 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H L+ T R +LLH+V + + +L+ N L K+IE G+ Sbjct: 179 PHSLVEAFKATLEETVRADLLLHVVDCASDTRET-------QLAEVNKVL-KEIEADGID 230 Query: 280 QI 281 Q+ Sbjct: 231 QL 232 >gi|221641175|ref|YP_002527437.1| GTP-binding protein Era [Rhodobacter sphaeroides KD131] gi|221161956|gb|ACM02936.1| GTP-binding protein Era [Rhodobacter sphaeroides KD131] Length = 295 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 18/170 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 1 MALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGQAQIVFVDTPGLFRPR 60 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + V++ +V A L E QA + D + + + + Sbjct: 61 RRLDRAMVAAAWGGAADADVIVLLVEAHRGLTEGTQAIIDAMRDRIP------QGQTVAL 114 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECL 322 +++ID V ++ L EL G PF S+ GHG+ ++ L Sbjct: 115 AINKIDRVKAEVLLGLAQEL---NGAFPFAETFMISAEKGHGVEKLRRWL 161 >gi|145356544|ref|XP_001422488.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582731|gb|ABP00805.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 351 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 3/87 (3%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI-IKNA 220 I+G PNAGKST + + K I Y P TT + LGI+ + + +L D PG+ ++ Sbjct: 54 AIVGRPNAGKSTLMNDLVGTKLSIVTYKPQTTRHRILGILSDENSQMVLLDTPGVMVEEF 113 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSA 246 ++ G+ + ++++ VL +IV A Sbjct: 114 NKLDGMMLKSVRNSMANADVLFYIVDA 140 >gi|27468172|ref|NP_764809.1| GTP-binding protein Era [Staphylococcus epidermidis ATCC 12228] gi|251810984|ref|ZP_04825457.1| GTP-binding protein Era [Staphylococcus epidermidis BCM-HMP0060] gi|282876007|ref|ZP_06284874.1| GTP-binding protein Era [Staphylococcus epidermidis SK135] gi|293366472|ref|ZP_06613149.1| GTP-binding protein Era [Staphylococcus epidermidis M23864:W2(grey)] gi|38257330|sp|Q8CP21|ERA_STAES RecName: Full=GTPase Era gi|27315718|gb|AAO04853.1|AE016748_87 GTP-binding protein (Era/TrmE family) [Staphylococcus epidermidis ATCC 12228] gi|251805494|gb|EES58151.1| GTP-binding protein Era [Staphylococcus epidermidis BCM-HMP0060] gi|281295032|gb|EFA87559.1| GTP-binding protein Era [Staphylococcus epidermidis SK135] gi|291319241|gb|EFE59610.1| GTP-binding protein Era [Staphylococcus epidermidis M23864:W2(grey)] gi|329725360|gb|EGG61843.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU144] gi|329735268|gb|EGG71560.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU045] gi|329737216|gb|EGG73470.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU028] Length = 299 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 6/132 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G++ + I D PGI K Sbjct: 9 VSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H+ R K+T + + + E++ + I++ L + + + L++ Sbjct: 69 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVKTPI-----FLVLNK 123 Query: 281 IDTVDSDTLARK 292 ID V DTL K Sbjct: 124 IDLVHPDTLMPK 135 >gi|331091877|ref|ZP_08340709.1| ferrous iron transporter B [Lachnospiraceae bacterium 2_1_46FAA] gi|330402776|gb|EGG82343.1| ferrous iron transporter B [Lachnospiraceae bacterium 2_1_46FAA] Length = 719 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 79/162 (48%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T A + ++P T+ G +K G+K+ I+ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNALTGANQFVGNWPGVTVEKKEGKLK-GHKDVIIMDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ER +L+I+ + +E N+ + Q + EL + I+ + Sbjct: 64 YTLEEVVARNYLVGERPDAILNIIDGTNMERNLYLSTQLM---------ELGIPV-IMAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V+ + ++L+ + G E S++ G GI + E Sbjct: 114 NMMDIVEKNGDKIHIDKLSRKLGCEVVEISALKGKGITKAAE 155 >gi|209881873|ref|XP_002142374.1| nucleolar GTP-binding protein 1 [Cryptosporidium muris RN66] gi|209557980|gb|EEA08025.1| nucleolar GTP-binding protein 1, putative [Cryptosporidium muris RN66] Length = 679 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 11/141 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ V+ A ++ Y FTT +G Y + + D PGI+ Sbjct: 175 IIVCGYPNVGKSSFVNCVSHANVEVEPYAFTTKSLYVGHFDYNYTRWQVIDTPGILDRP- 233 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEI 275 + +R L HI S + + + +C I ++ Y+S R K + Sbjct: 234 ----LDERNTIEMTAITALAHIHSCILYFIDISEECGYSIERQVQLYHSIKTLFRNKPVL 289 Query: 276 VGLSQIDTVDSDTLARKKNEL 296 + L++ D+ D+L ++ L Sbjct: 290 IILNKTDSRSLDSLTEEEKRL 310 >gi|156062896|ref|XP_001597370.1| hypothetical protein SS1G_01564 [Sclerotinia sclerotiorum 1980] gi|154696900|gb|EDN96638.1| hypothetical protein SS1G_01564 [Sclerotinia sclerotiorum 1980 UF-70] Length = 530 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 25/173 (14%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTR-------AKPKIADYPFTTLYPNLGIVKEGYKE 207 +LK +G+IG PN GKS+ + ++T A P A+ TT +L VK K Sbjct: 298 QLKRSVSVGVIGYPNVGKSSVINALTSRLGGAGAACPVGAEAGVTT---SLRTVKIDSK- 353 Query: 208 FILADIPGIIKNAHQGAGIGDRFLKHTERTH-VLLHIVSALE-ENVQAAYQCILDELSAY 265 L D PGI+ AG + K E+ VLL+ + + E+ A +L LSA Sbjct: 354 LTLLDSPGIV---FPTAGDSSKASKIEEQARLVLLNAIPPKQIEDPVPAVTLLLKRLSAS 410 Query: 266 NSELRKKIEIVGLSQIDTVDSDT-------LARKKNELATQCGQVPFEFSSIT 311 L K +++ GL + +V+ D+ +ARK+ L G VP S+ T Sbjct: 411 QDMLNKLMDVYGLPPLVSVNGDSTSDFLIQVARKRGRLGK--GGVPNISSAAT 461 >gi|57867009|ref|YP_188710.1| GTP-binding protein Era [Staphylococcus epidermidis RP62A] gi|81674466|sp|Q5HNY0|ERA_STAEQ RecName: Full=GTPase Era gi|57637667|gb|AAW54455.1| GTP-binding protein Era [Staphylococcus epidermidis RP62A] Length = 299 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 6/132 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G++ + I D PGI K Sbjct: 9 VSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H+ R K+T + + + E++ + I++ L + + + L++ Sbjct: 69 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVKTPI-----FLVLNK 123 Query: 281 IDTVDSDTLARK 292 ID V DTL K Sbjct: 124 IDLVHPDTLMPK 135 >gi|107104042|ref|ZP_01367960.1| hypothetical protein PaerPA_01005115 [Pseudomonas aeruginosa PACS2] Length = 419 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 2/103 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T ++ A+ F TL P L ++ + +LAD G I Sbjct: 184 IPAVSLVGYTNAGKSTLFNALTASEVYAANQLFATLDPTLRRLQLDDLGPVVLADTVGFI 243 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL 259 ++ H+ L+ + +LLH++ A E A + +L Sbjct: 244 RHLPHKLVEAFRATLEESSNADLLLHVIDAYEPERDAQVEQVL 286 >gi|325106895|ref|YP_004267963.1| GTP-binding protein HflX [Planctomyces brasiliensis DSM 5305] gi|324967163|gb|ADY57941.1| GTP-binding protein HflX [Planctomyces brasiliensis DSM 5305] Length = 462 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 35/166 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL--------YPNLGIVKEGYKEFILADI 213 + ++G NAGKST + ++T + IA+ F TL PN G E +L+D Sbjct: 206 VSLVGYTNAGKSTLMRALTGEEVYIANQLFATLDTKTRKWSIPNWG-------EVLLSDT 258 Query: 214 PGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 G +++ L H H++ S LEE +QA +L + A N E + +I Sbjct: 259 VGFVRD-----------LPH----HLVASFKSTLEEALQA--DLLLHVVDASNPEAQLQI 301 Query: 274 EIVG--LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQ 317 + V L +I D +TL N++ G P E + + IP+ Sbjct: 302 DTVEHVLEEIGASDKETLL-VFNKVDRLPGHTPAEQTETSEDDIPE 346 >gi|255021269|ref|ZP_05293318.1| GTP-binding protein EngA [Acidithiobacillus caldus ATCC 51756] gi|254969280|gb|EET26793.1| GTP-binding protein EngA [Acidithiobacillus caldus ATCC 51756] Length = 447 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 16/174 (9%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + A I ++G PN GKST +TR++ +AD P T + G+ + G + F++ D G Sbjct: 1 MAAVIALVGRPNVGKSTLFNRLTRSREALVADLPGLTRDRHYGVAQHGTQRFLVIDTGGF 60 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 +G A + + + + +V A +E + A + I +ELR+ + Sbjct: 61 EPEEREGLVAAMAAQTRQAIAEADAVCFLVDA-KEGLSAQDEEI-------AAELRRSGK 112 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 V L ++ +D + E +P+ ++ GHG+ E L D IF+ Sbjct: 113 TVYLV-VNKMDVRGAVAELPEFHRLGLGMPYTIAASHGHGV----ETLLDAIFA 161 >gi|166364450|ref|YP_001656723.1| GTP-binding protein Era [Microcystis aeruginosa NIES-843] gi|166086823|dbj|BAG01531.1| GTP-binding protein ERA homolog [Microcystis aeruginosa NIES-843] Length = 318 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 16/172 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 IGIIG PN GKST + + K I T L GIV + I D PGI K Sbjct: 29 IGIIGRPNVGKSTLMNQLVGQKIAITSPIAQTTRNRLRGIVTSERAQMIFVDTPGIHKPH 88 Query: 221 HQGAGIGDRFLKHTER----THVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +G +K+ E ++L +V + + + + I D L+ + I+ Sbjct: 89 HE---LGKVLVKNAENAINSVDLVLFVVDS-SNFLGSGDRYIADLLTKNQTP-----TIL 139 Query: 277 GLSQIDTV--DSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 GL++ D D + L LA + +FS++ G GI ++ L D + Sbjct: 140 GLNKADQQPEDREPLDDSYRTLAAENNWPLLKFSALEGTGIEELQNLLIDSL 191 >gi|149371535|ref|ZP_01890951.1| putative GTP-binding protein [unidentified eubacterium SCB49] gi|149355162|gb|EDM43722.1| putative GTP-binding protein [unidentified eubacterium SCB49] Length = 293 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 2/93 (2%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + A V I TT + LGIV + +L+D PGIIK A Sbjct: 8 VNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQMLLSDTPGIIKPA 67 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQ 252 ++ F+K E VLL++V E++++ Sbjct: 68 YELQASMMDFVKSAFEDADVLLYLVELGEKDLK 100 >gi|149377523|ref|ZP_01895264.1| GTPase [Marinobacter algicola DG893] gi|149358215|gb|EDM46696.1| GTPase [Marinobacter algicola DG893] Length = 432 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 7/170 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +T + AD F TL P L ++ ++AD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNRITTSTVYAADQLFATLDPTLRRLELPDIGPVVMADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ H+ L+ T +LLHI+ + + + + L+ ++ +++ Sbjct: 257 RHLPHKLVEAFRATLEETTEASILLHIIDCHDHRRDENMEQVEEVLAEIGADEIPVLQV- 315 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID +D+ ++NE V S++TG G+ + + + +++ Sbjct: 316 -FNKIDLLDNFQPRVERNEDGV---PVRVWVSAVTGEGLEDLFDTIVERL 361 >gi|147678455|ref|YP_001212670.1| GTPase [Pelotomaculum thermopropionicum SI] gi|146274552|dbj|BAF60301.1| GTPase [Pelotomaculum thermopropionicum SI] Length = 434 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 6/103 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP-NLGIVKEGYKEFILADIPGIIKN- 219 + I+G NAGKST L +T A + D F TL P +V + +L D G I+N Sbjct: 216 VAIVGYTNAGKSTLLKKLTGADVLVEDKLFATLDPVTRRVVLPDNETILLTDTVGFIQNL 275 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCI 258 H L+ +LLH+V A +EE + A + + Sbjct: 276 PHHLVAAFRATLEEVMEADLLLHVVDASHPYMEEQIGAVNEVL 318 >gi|152977162|ref|YP_001376679.1| ferrous iron transport protein B [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025914|gb|ABS23684.1| ferrous iron transport protein B [Bacillus cytotoxicus NVH 391-98] Length = 662 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 17/167 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 4 VALLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKIGKLKD--KQGTLIDLPGVYDLNP 61 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + G+ FL TE H +L+IV S E N+ Q + E K + I G Sbjct: 62 VSRDEGVVTHFLL-TEEFHYMLNIVDSSQFERNMHLTLQLL---------EFGKPMSI-G 110 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 L+ ID + L+ G + G G ++L LH+ Sbjct: 111 LNMIDVAKQRGIVIDVKRLSEILGVTVVPVVARNGKGCDELLATLHE 157 >gi|254229699|ref|ZP_04923108.1| ferrous iron transport protein B [Vibrio sp. Ex25] gi|262394874|ref|YP_003286728.1| ferrous iron transport protein B [Vibrio sp. Ex25] gi|151937744|gb|EDN56593.1| ferrous iron transport protein B [Vibrio sp. Ex25] gi|262338468|gb|ACY52263.1| ferrous iron transport protein B [Vibrio sp. Ex25] Length = 758 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 17/169 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G K EF+L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGQFKHAGDEFLLTDLPGIYSLDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH +++++V A LE ++ Q EL + + IV Sbjct: 68 SNSIDESIASRAVLTHPADLIINVVDATSLERSLYMTLQL---------RELGRPM-IVV 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L+++D + + +EL G S+ + + E LH I Sbjct: 118 LNKMDALKRERQMINVSELEKTLGCPVVSLSATNKTQVAEFKEKLHKSI 166 >gi|319400903|gb|EFV89122.1| GTP-binding protein Era [Staphylococcus epidermidis FRI909] Length = 299 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 6/132 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G++ + I D PGI K Sbjct: 9 VSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H+ R K+T + + + E++ + I++ L + + + L++ Sbjct: 69 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVKTPI-----FLVLNK 123 Query: 281 IDTVDSDTLARK 292 ID V DTL K Sbjct: 124 IDLVHPDTLMPK 135 >gi|91792618|ref|YP_562269.1| GTP-binding protein EngA [Shewanella denitrificans OS217] gi|122968866|sp|Q12PT0|DER_SHEDO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|91714620|gb|ABE54546.1| Small GTP-binding protein domain [Shewanella denitrificans OS217] Length = 491 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I + +G + ++ L E V+L + A + +A I L + R K Sbjct: 60 IDGSEEGIETKMAEQSLAAIEEADVVLFLTDA-RAGLTSADLAIAQHLRS-----RDKTT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V +++D +D+D++ A G+V ++ ++ G G+ ++E Sbjct: 114 FVVANKVDGIDADSVC--GEFWALGLGEV-YQMAAAQGRGVTNMIE 156 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 27/190 (14%) Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTT---LYPNLGIVKE 203 Q+++ L +KL IIG PN GKST + + + + D P TT +Y + + +E Sbjct: 192 QKRLQDLPIKL----AIIGKPNVGKSTLINRILGEERVVVYDAPGTTRDSIY--IPMERE 245 Query: 204 GYKEFILADIPGIIKNAHQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQCI 258 G +E++L D G+ + + I ++F LK E +V+L +V A E + + Sbjct: 246 G-REYVLIDTAGVRRRSKVHEVI-EKFSVIKTLKAVEDANVVLLVVDAREGIAEQDLGLL 303 Query: 259 LDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHG 314 L+A + ++ +++ D +D R K+EL + G + F S++ G G Sbjct: 304 GFTLNA------GRALVIAVNKWDGIDQTVKDRVKSELDRRLGFIDFAKIHFISALHGTG 357 Query: 315 IPQILECLHD 324 + + E + + Sbjct: 358 VGHLYESIEE 367 >gi|195978544|ref|YP_002123788.1| GTP-binding protein Era [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|226741237|sp|B4U458|ERA_STREM RecName: Full=GTPase Era gi|195975249|gb|ACG62775.1| GTP-binding protein Era-like [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 298 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 7 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHKPK 66 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 67 ---TALGDFMVESAYSTLREVETVLFMVPA-DEKRGKGDDMIIERLKAARIPV-----IL 117 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ + +++ L D + Sbjct: 118 VINKIDKVHPDQLLEQIDDFRSQMDFKEIVP--ISALQGNNVETLVQLLKDNL 168 >gi|187934578|ref|YP_001887214.1| ferrous iron transport protein B [Clostridium botulinum B str. Eklund 17B] gi|187722731|gb|ACD23952.1| ferrous iron transport protein B [Clostridium botulinum B str. Eklund 17B] Length = 716 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 IG+ G PN GK+T +T + + ++P T+ G +K K+ + D+PGI + Sbjct: 5 IGLAGNPNCGKTTMFNDLTGSTQYVGNWPGVTVEKKGGKLKWN-KDVEIVDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ++ V+++I+ A +E N+ Q + EL ++ L Sbjct: 64 YTLEEVVTRDFMMNDKPDVIINIIDASNIERNLYLTTQIL--ELGIPT--------VLAL 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V+ + K +L+ G E S+I G GI +++E Sbjct: 114 NMMDIVEKNGDKLKVEKLSQLLGCPIVETSAIKGKGIKEVVE 155 >gi|313837161|gb|EFS74875.1| GTP-binding protein HflX [Propionibacterium acnes HL037PA2] gi|314927817|gb|EFS91648.1| GTP-binding protein HflX [Propionibacterium acnes HL044PA1] gi|314971934|gb|EFT16032.1| GTP-binding protein HflX [Propionibacterium acnes HL037PA3] gi|328907281|gb|EGG27047.1| GTP-binding protein HflX [Propionibacterium sp. P08] Length = 483 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 11/167 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I+G NAGKS+ L +TRA + + F TL P +G + + L D G Sbjct: 262 VPSVAIVGYTNAGKSSLLNRLTRAGVLVENALFATLDPTTRRTTTSDG-RVYTLTDTVGF 320 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 +++ H L+ T VLLH+V A + + + LS + E+ Sbjct: 321 VRHLPHDLVEAFASTLEETAMADVLLHVVDAADPDPVGQVDAVRAVLSGIGAS--AIPEV 378 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + L++ID + D + ++ + S+ TG G +++E + Sbjct: 379 LVLNKIDRLSDDAIVALRSTFPE-----AYLVSAHTGEGTDELIEAV 420 >gi|291543695|emb|CBL16804.1| ferrous iron transporter FeoB [Ruminococcus sp. 18P13] Length = 828 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 14/157 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PNAGK+T ++T + + ++P T+ G +K G+ + + D+PGI + Sbjct: 5 IALAGNPNAGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLK-GHSDVTITDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ER +L+I+ + LE N+ Q + EL + + + Sbjct: 64 YTLEEVVARNYLIQERPDAILNIIDGTNLERNLYLTTQLV---------ELGIPV-VAAI 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 + +D V + ELA + G E S++ G GI Sbjct: 114 NMMDVVRKNGDKINTEELAKELGCQVVEISALKGTGI 150 >gi|256821744|ref|YP_003145707.1| GTP-binding proten HflX [Kangiella koreensis DSM 16069] gi|256795283|gb|ACV25939.1| GTP-binding proten HflX [Kangiella koreensis DSM 16069] Length = 433 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 4/129 (3%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 I + I+G NAGKST +T A D F TL P L + + I+AD G I Sbjct: 201 IKTVSIVGYTNAGKSTLFNYLTTAGVLAEDKLFATLDPTLRRISLPQGTDVIIADTVGFI 260 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ H+ L+ + VLLH++ A + + + + L+ +E ++EI Sbjct: 261 RHLPHELVAAFRATLEESVEADVLLHVIDAASDRRDENMEQVEEVLTEIGAETIPRLEI- 319 Query: 277 GLSQIDTVD 285 ++ID ++ Sbjct: 320 -YNKIDLIE 327 >gi|153871986|ref|ZP_02001009.1| GTPase [Beggiatoa sp. PS] gi|152071549|gb|EDN68992.1| GTPase [Beggiatoa sp. PS] Length = 300 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 16/130 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST L + K I P TT + LGI G + I D PGI + Sbjct: 11 VAIIGRPNVGKSTLLNYLLGKKLCITSRKPQTTRHRLLGIKTLGNTQIIYVDTPGIHQRQ 70 Query: 221 HQGAGIGDRFLKHTER-----THVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 H +R+L + +++ +V AL + +Y +L L+ + + I Sbjct: 71 HNAM---NRYLNRAAQGSMVGVDMIIWLVEALCWTEEDSY--VLKSLAQLTAPV-----I 120 Query: 276 VGLSQIDTVD 285 +G+++ID ++ Sbjct: 121 LGVNKIDKIN 130 >gi|67922497|ref|ZP_00516006.1| GTP-binding protein, HSR1-related [Crocosphaera watsonii WH 8501] gi|67855668|gb|EAM50918.1| GTP-binding protein, HSR1-related [Crocosphaera watsonii WH 8501] Length = 491 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 23/151 (15%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-------EGYKEFILA 211 + I I+G NAGKST + ++T A+ AD F TL P + + Y F+L Sbjct: 315 VPSIAIVGYTNAGKSTLINALTNAEVYTADQLFATLDPTTRRLSGIDDNTGQPYT-FLLT 373 Query: 212 DIPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVS----ALEENVQAAYQCILDELSA 264 D G I + D F L+ LLH+V A + ++Q+ IL E+ Sbjct: 374 DTVGFIHEL--PPSLVDAFRATLEEVTEADALLHLVDLSHPAWQHHIQSVMN-ILQEMPL 430 Query: 265 YNSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 + ++ ++IDTVD +TL + E Sbjct: 431 VPGPI-----LLVFNKIDTVDGETLKVAQEE 456 >gi|21231170|ref|NP_637087.1| GTP-binding protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768822|ref|YP_243584.1| GTP-binding protein [Xanthomonas campestris pv. campestris str. 8004] gi|188991937|ref|YP_001903947.1| GTP-binding protein, probable [Xanthomonas campestris pv. campestris str. B100] gi|21112810|gb|AAM41011.1| GTP-binding protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574154|gb|AAY49564.1| GTP-binding protein [Xanthomonas campestris pv. campestris str. 8004] gi|167733697|emb|CAP51902.1| GTP-binding protein, probable [Xanthomonas campestris pv. campestris] Length = 439 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 1/86 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 I ++G NAGKST ++T A AD F TL P + + +LAD G +++ Sbjct: 201 IALVGYTNAGKSTLFNALTGADAYAADQLFATLDPTVRRIALPGGSAVLADTVGFVRDLP 260 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA 246 H+ L +LLHIV A Sbjct: 261 HELVAAFRSTLSEARDADLLLHIVDA 286 >gi|317499645|ref|ZP_07957905.1| GTP-binding protein HflX [Lachnospiraceae bacterium 5_1_63FAA] gi|316893059|gb|EFV15281.1| GTP-binding protein HflX [Lachnospiraceae bacterium 5_1_63FAA] Length = 412 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 70/165 (42%), Gaps = 18/165 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + I+G NAGKST L T A D F TL P + G + ++ D G I+ Sbjct: 202 VCIVGYTNAGKSTLLNHFTNAGVYEEDQLFATLDPTTKSLDLSGGQTILMTDTVGFIRKL 261 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKIEI 275 H L+ + + ++LH+V A E+ ++A Y L +L A S + I Sbjct: 262 PHHLVEAFKSTLEEAKYSDLILHVVDASNPQKEKQMEAVYDT-LKQLGANESPI-----I 315 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ID ++ D + + N + S G G Q+LE Sbjct: 316 TAFNKIDLLNGDEILKDPN------AEAVVRISGKNGEGTDQLLE 354 >gi|228993562|ref|ZP_04153470.1| Ferrous iron transport protein B [Bacillus pseudomycoides DSM 12442] gi|228766153|gb|EEM14799.1| Ferrous iron transport protein B [Bacillus pseudomycoides DSM 12442] Length = 657 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 17/165 (10%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAH 221 ++G PN GK++ ++T + + ++ T+ +G +K K+ L D+PGI + Sbjct: 1 MLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKG--KQGTLIDLPGIYDLNPVS 58 Query: 222 QGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + G+ +FL TE H +L+IV S E N+ Q + E K + I GL+ Sbjct: 59 RDEGVVTKFL-LTEEFHHMLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-GLN 107 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 ID + N L+ G + +G G ++L LH+ Sbjct: 108 MIDVAKQRGIVINANRLSEVLGVTVVPVVARSGKGCEELLATLHE 152 >gi|20807587|ref|NP_622758.1| GTPase [Thermoanaerobacter tengcongensis MB4] gi|20516126|gb|AAM24362.1| GTPases [Thermoanaerobacter tengcongensis MB4] Length = 428 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 6/105 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 + I+G NAGKST L ++T A + D F TL P +V +E IL D G I+ Sbjct: 216 VAIVGYTNAGKSTLLNALTGADAYVEDKLFATLDPTARKLVLPSGREVILTDTVGFIRKL 275 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILD 260 H L+ + +LLH++ ++E ++ + + D Sbjct: 276 PHDLVEAFKSTLEEVKYADLLLHVIDVTSPDMDEKIKVVEKVLSD 320 >gi|50289227|ref|XP_447044.1| hypothetical protein [Candida glabrata CBS 138] gi|52783192|sp|Q6FRV0|NOG1_CANGA RecName: Full=Nucleolar GTP-binding protein 1 gi|49526353|emb|CAG59977.1| unnamed protein product [Candida glabrata] Length = 645 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL +T++ ++ Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLRCITKSDVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGIL 225 >gi|330446667|ref|ZP_08310319.1| small GTP-binding domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490858|dbj|GAA04816.1| small GTP-binding domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 500 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 21/173 (12%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IK 218 + IIG PN GKST + + + D P TT ++ +E++L D GI K Sbjct: 214 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGQEYVLIDTAGIRRRK 273 Query: 219 NAHQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 N HQ ++F LK E +V+L ++ A E + L+A S Sbjct: 274 NMHQAV---EKFSVIQTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRS------ 324 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECL 322 ++ +++ D +D++ R K+EL + G V F S++ G G+ + E + Sbjct: 325 LVIAVNKWDGLDNEVKERVKSELDRRLGFVDFARIHFISALHGTGVGHLYESV 377 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 10/134 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEEHEFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L +V + AA + I L + R K Sbjct: 60 IDGTEEGVETKMAEQSLAAIEEADVVLFLVDG-RAGLTAADEAIAKHLRS-----RDKPT 113 Query: 275 IVGLSQIDTVDSDT 288 + ++++D +D+D+ Sbjct: 114 FLVVNKVDGIDADS 127 >gi|213410483|ref|XP_002176011.1| GTP binding protein Nog1 [Schizosaccharomyces japonicus yFS275] gi|212004058|gb|EEB09718.1| GTP binding protein Nog1 [Schizosaccharomyces japonicus yFS275] Length = 640 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 30/54 (55%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + G PN GKS+F+ +TRA+ + Y FTT +G Y + + D PGI+ Sbjct: 173 VCGYPNVGKSSFMNKITRAQVDVQPYAFTTKSLYVGHFDYKYLRWQVIDTPGIL 226 >gi|325068464|ref|ZP_08127137.1| GTP-binding proten HflX [Actinomyces oris K20] Length = 273 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 10/163 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 I + I G NAGKS+ + +T A + D F TL P + EG + + L D G Sbjct: 62 IPSVAIAGYTNAGKSSLMNRLTEAGIMVEDALFATLDPTVRRAETSEG-RTYTLTDTVGF 120 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 ++N H+ L+ ++LH+V A + + + LS L E+ Sbjct: 121 VRNLPHELIEAFRSTLEEVAGADLVLHVVDAAHPDPLSQVAAVRTVLSEIPGALDVP-EL 179 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 + L++ D D+ TLA + L S+ TG GI ++ Sbjct: 180 IVLNKTDLADAVTLAALRTGLPGAVA-----VSARTGEGIEEL 217 >gi|78217514|gb|ABB36863.1| GTP-binding protein EngA [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 475 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 21/170 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNA 220 + ++G PNAGKS+ + +++ ++ I T ++ I E G + ++ D G+ + A Sbjct: 211 LAMLGRPNAGKSSLVNALSGSRRMIVSDVAGTTRDSVDIAVELGGRRYVFVDTAGVRRRA 270 Query: 221 HQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQCI--LDELSAYNSELRKKI 273 + +R+ LK T + V L ++ A+E Q + I LDE RK Sbjct: 271 KIQDPV-ERYSVNSSLKSTTKADVTLVVLDAVEGLTQQDKRLIDLLDE--------RKTP 321 Query: 274 EIVGLSQIDTVDSD---TLARKKNELATQCGQVPFEF-SSITGHGIPQIL 319 ++ +++ID V D L R ++ T C VP + S+ +G G+ ++L Sbjct: 322 FMLVINKIDLVPRDGLTALKRLYDDALTFCKHVPIMYISARSGRGVDKLL 371 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I +IG PN GKST + R+ I D P T G VK G ++FI+ D GI Sbjct: 21 MLPKIALIGRPNVGKSTLFNRLIRSNRAITHDRPGVTRDRMEGYVKVGDRKFIIIDTGGI 80 Query: 217 IKNAHQGAGIG 227 + H G Sbjct: 81 TLDEHAAVAEG 91 >gi|38234285|ref|NP_940052.1| GTP-binding protein Era [Corynebacterium diphtheriae NCTC 13129] gi|81829879|sp|Q6NG20|ERA_CORDI RecName: Full=GTPase Era gi|38200548|emb|CAE50243.1| Putative GTP-binding protein [Corynebacterium diphtheriae] Length = 305 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 12/167 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I +G PN GKST ++ K I A+ P TT +P GIV + I+ D PG+ K Sbjct: 15 ISFVGRPNTGKSTLTNALVGEKIAITANQPETTRHPIRGIVHREDAQIIVVDTPGLHKPR 74 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL-S 279 + +K T L+ I +E + + ILD + ++ K ++G+ + Sbjct: 75 TLLGERLNEVVKDTYADMDLIAITVPADEKIGPGDRWILDAV----KKVAPKTPLLGIVT 130 Query: 280 QIDTVDSDTLARKKNELATQCG----QVPFEFSSITGHGIPQILECL 322 ++D D +A + EL G VP S++TG +L+ + Sbjct: 131 KVDKASRDQVAVQLMELHELLGGNSEVVP--VSAVTGEQRDVLLDVI 175 >gi|330686118|gb|EGG97739.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU121] Length = 299 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 19/169 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT GI+ + I D PGI K Sbjct: 9 VSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGIMTRDDAQIIFIDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K T ++ +V+ + E++ + I+D L +L+ + +V Sbjct: 69 HK---LGDYMMKVATNTLSEIDAIMFMVN-VNEDIGRGDEYIMDML----KDLKTPVFLV 120 Query: 277 GLSQIDTVDSDTLA---RKKNELATQCGQVPFEFSSITGHGIPQILECL 322 L++ID V D L K E VP S++ G + ++ L Sbjct: 121 -LNKIDLVHPDALMPKIEKYQEYMNFTEIVP--ISALEGLNVDHFIDVL 166 >gi|152995389|ref|YP_001340224.1| small GTP-binding protein [Marinomonas sp. MWYL1] gi|189037150|sp|A6VV10|DER_MARMS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|150836313|gb|ABR70289.1| small GTP-binding protein [Marinomonas sp. MWYL1] Length = 445 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I I ++G PN GKST +TR++ +ADYP T G K G EFI+ D GI Sbjct: 1 MIPVIALVGRPNVGKSTLFNQLTRSRDALVADYPGLTRDRKYGDGKLGEHEFIVIDTGGI 60 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 IG++G PN GKST + + + + D P TT KE+ L D GI + Sbjct: 182 IGVVGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSVYIPYVRNDKEYTLIDTAGIRRRK 241 Query: 221 HQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 H + ++F L+ + +V++ ++ + E V+ I L A + I Sbjct: 242 HVKEAV-EKFSIVKALQAIQDANVVIVVIDSHENLVEQDLHMIGYVLDA------GRGVI 294 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECL 322 + +++ D + D K+E+ + G VP+ S++ G G+ + + + Sbjct: 295 IAINKWDGLKKDDREHIKSEVERRLGFVPYAKVHYISALHGTGVGDLYDTI 345 >gi|260061761|ref|YP_003194841.1| GTP-binding protein Era [Robiginitalea biformata HTCC2501] gi|88785893|gb|EAR17062.1| putative GTP-binding protein (cell growth-related) [Robiginitalea biformata HTCC2501] Length = 295 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 22/178 (12%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + A V I TT + LGIV + + +D PGIIK A Sbjct: 9 VNIIGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGIVNGDDFQIVFSDTPGIIKPA 68 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + L+ + V L +V A L V+ + + DE A+ ++R +I L Sbjct: 69 YG--------LQESMMDFVRLALVDADVLLYMVEVGEKGLKDE--AFAEKIRSS-QIPVL 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVP----FEFSSITGHGIPQILECLHDKIFSIRGE 332 I+ +D+ + + ++A Q P S++ G+P++L D+I ++ E Sbjct: 118 LLINKIDTSDQGQLEEQVAFWTEQFPNAEIIPISALERFGVPEVL----DRILALLPE 171 >gi|308270241|emb|CBX26853.1| Ferrous iron transport protein B [uncultured Desulfobacterium sp.] Length = 737 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 3/100 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 + + G PN+GK+T +T A+ + +YP T+ G + G EF + D+PG A Sbjct: 7 VALAGNPNSGKTTIFNELTGARQHVGNYPGVTVERKEGFRRHGDIEFQIVDLPGTYSLTA 66 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCI 258 + + R E+ V++ I+ A LE N+ A Q + Sbjct: 67 YSEEELVARNFIIDEKPDVVVDIIDASNLERNLYLAVQLM 106 >gi|302342153|ref|YP_003806682.1| GTP-binding protein Era [Desulfarculus baarsii DSM 2075] gi|301638766|gb|ADK84088.1| GTP-binding protein Era [Desulfarculus baarsii DSM 2075] Length = 296 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 10/126 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PNAGKSTFL V K I +D P TT + LG+ + + D PG+ Sbjct: 6 VAIVGPPNAGKSTFLNHVLGFKLAITSDKPQTTRHRLLGVCNREESQIVFLDTPGL---- 61 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD--ELSAYNSELRKKIEIVGL 278 H+ ++ + T L V A+ V+A+ + + + ++ +E +K + +V L Sbjct: 62 HKPMRALNKLMVRT--AMAALQDVEAVLFMVEASAKGLAEGQRVAGMLAEAKKPV-VVAL 118 Query: 279 SQIDTV 284 ++ID V Sbjct: 119 NKIDLV 124 >gi|160878692|ref|YP_001557660.1| GTP-binding proten HflX [Clostridium phytofermentans ISDg] gi|160427358|gb|ABX40921.1| GTP-binding proten HflX [Clostridium phytofermentans ISDg] Length = 420 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 14/167 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP---NLGIVKEGYKEFILADIPGIIK 218 + I+G NAGKST L +T A A+ F TL P NL + E ++ +L D G I+ Sbjct: 204 VAIVGYTNAGKSTLLNRLTEADVLEANMLFATLDPTTRNLSL--ESGQQVLLTDTVGFIR 261 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 H L+ + +++H+V A N QA Q + Y E KK+++ Sbjct: 262 KLPHHLIDAFRSTLEEAKYADIIIHVVDA--SNPQAYKQMHI----VY--ETLKKLQVTD 313 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 + I + L +++ + + S+ G G+ ++L+ + + Sbjct: 314 KTVITVFNKQDLVQEEEPMKDLKADKTVKISAKQGVGVVELLDIIEE 360 >gi|302335736|ref|YP_003800943.1| GTP-binding protein HflX [Olsenella uli DSM 7084] gi|301319576|gb|ADK68063.1| GTP-binding protein HflX [Olsenella uli DSM 7084] Length = 432 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 19/165 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + + G NAGKST L +T A + D F TL P +V + ++ + D G I+ Sbjct: 212 VALAGYTNAGKSTLLNRLTGAGAYVKDELFATLDPTTRSMVLDAGRKVTVTDTVGFIQKL 271 Query: 221 HQGAGIGDRF---LKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKIE 274 + + F L ++L + A + NV+ AA + IL ++SA + Sbjct: 272 P--TTLVESFKSTLAEVMAADLVLLVADASDGNVRKEIAAVRRILGDISASETP-----T 324 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 +V ++ID +D + LA + VP S++TG GIP +L Sbjct: 325 VVVFNKIDALDDEELALLRT---GAPDAVP--ISALTGRGIPGLL 364 >gi|167766321|ref|ZP_02438374.1| hypothetical protein CLOSS21_00825 [Clostridium sp. SS2/1] gi|167712040|gb|EDS22619.1| hypothetical protein CLOSS21_00825 [Clostridium sp. SS2/1] gi|291558964|emb|CBL37764.1| GTP-binding protein HflX [butyrate-producing bacterium SSC/2] Length = 412 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 70/165 (42%), Gaps = 18/165 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + I+G NAGKST L T A D F TL P + G + ++ D G I+ Sbjct: 202 VCIVGYTNAGKSTLLNHFTNAGVYEEDQLFATLDPTTKSLDLSGGQTILMTDTVGFIRKL 261 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKIEI 275 H L+ + + ++LH+V A E+ ++A Y L +L A S + I Sbjct: 262 PHHLVEAFKSTLEEAKYSDLILHVVDASNPQKEKQMEAVYDT-LKQLGANESPI-----I 315 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ID ++ D + + N + S G G Q+LE Sbjct: 316 TAFNKIDLLNGDEILKDPN------AEAVVRISGKNGEGTDQLLE 354 >gi|90579361|ref|ZP_01235171.1| GTP-binding protein EngA [Vibrio angustum S14] gi|90440194|gb|EAS65375.1| GTP-binding protein EngA [Vibrio angustum S14] Length = 500 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 21/173 (12%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IK 218 + IIG PN GKST + + + D P TT ++ +E++L D GI K Sbjct: 214 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGQEYVLIDTAGIRRRK 273 Query: 219 NAHQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 N HQ ++F LK E +V+L ++ A E + L+A S Sbjct: 274 NMHQAV---EKFSVIQTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRS------ 324 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECL 322 ++ +++ D +D++ R K+EL + G V F S++ G G+ + E + Sbjct: 325 LVIAVNKWDGLDNEVKERVKSELDRRLGFVDFARIHFISALHGTGVGHLYESV 377 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 10/134 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEEHEFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L +V + AA + I L + R+K Sbjct: 60 IDGTEEGVETKMAEQSLAAIEEADVVLFLVDG-RAGLTAADEAIAKHLRS-----REKPT 113 Query: 275 IVGLSQIDTVDSDT 288 + ++++D +D+D+ Sbjct: 114 FLVVNKVDGIDADS 127 >gi|328951761|ref|YP_004369095.1| GTP-binding proten HflX [Desulfobacca acetoxidans DSM 11109] gi|328452085|gb|AEB07914.1| GTP-binding proten HflX [Desulfobacca acetoxidans DSM 11109] Length = 569 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 10/89 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFILADIPGIIK 218 I I+G NAGKST L ++TRA+ D F TL P L KE +E I+ D G I+ Sbjct: 380 ISIVGYTNAGKSTLLNTLTRAEVLAEDRLFATLDPTSRRLRFPKE--REVIITDTVGFIR 437 Query: 219 NAHQGAGIGDRF---LKHTERTHVLLHIV 244 + + + + F L+ E +LLH++ Sbjct: 438 DLPK--DLLEAFKATLEELEDADLLLHVI 464 >gi|320169486|gb|EFW46385.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 469 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 12/160 (7%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 + +IG PNAGKS+ + S+ R ++ +T LGI K+ +L D PG+++ N Sbjct: 195 VAVIGAPNAGKSSIVNSIVGRTVSIVSSRSQSTRERILGIATRANKQMVLFDTPGLLRFN 254 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI-VSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + IG E T LL VS + +V +L A + R+ I + L Sbjct: 255 FSRRIPIGREL--SPESTRALLEADVSMVVYDVSKPLTPADHDLFAARNYPREAILV--L 310 Query: 279 SQIDTVD-SDTLARKKNELATQCGQVPFE---FSSITGHG 314 +++D +D LAR + E+ ++ G FE +S + HG Sbjct: 311 NKVDLAPKADILARAE-EIVSRPGAKQFEKVFLTSASAHG 349 >gi|262304229|gb|ACY44707.1| GTP-binding protein [Daphnia magna] Length = 278 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 7/94 (7%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAY 265 + DI G++K AH+G G+G+ FL H + H+ E +V+ + D + Sbjct: 35 IVDIAGLVKGAHEGQGLGNAFLSHIRSVDAIFHLCRTFESEEITHVEGDVNPVRD-IEII 93 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ 299 N ELR K E L+ I +S L R ++ T+ Sbjct: 94 NEELRLKDEEYLLATIKKTES--LMRSDKKMKTE 125 >gi|56476104|ref|YP_157693.1| GTP-binding protein hflX [Aromatoleum aromaticum EbN1] gi|56312147|emb|CAI06792.1| GTP-binding protein hflX [Aromatoleum aromaticum EbN1] Length = 385 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 18/161 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL--YPNLGIVKEGYKEFILADIPGIIKN 219 + ++G NAGKST ++T+A AD F TL V EG +L+D G I++ Sbjct: 200 VSLVGYTNAGKSTLFNALTKAGAYAADQLFATLDTTSRRLYVGEG-GNVVLSDTVGFIRD 258 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKIEI 275 H L+ T +LLH+V A E+ +A A +L E+ A + +I Sbjct: 259 LPHSLVAAFHSTLEETASADLLLHVVDAASEDREAQVDAVNRVLVEIGAGDVP-----QI 313 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGI 315 + +++ID ++ A + + G++ F S+ TG G+ Sbjct: 314 MVMNKIDLTQAEAAANRD-----EYGKIDRVFLSARTGEGL 349 >gi|293400673|ref|ZP_06644818.1| GTP-binding protein Era [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305699|gb|EFE46943.1| GTP-binding protein Era [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 301 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I IIG PNAGKST L ++ K I P TT GI+ +FI D PGI K Sbjct: 8 IAIIGRPNAGKSTLLNALLNEKIAITTPKPQTTRNNISGILTREDAQFIFTDTPGIHKPK 67 Query: 221 HQ 222 H+ Sbjct: 68 HE 69 >gi|262304301|gb|ACY44743.1| GTP-binding protein [Streptocephalus seali] Length = 279 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 5/80 (6%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAY 265 + DI G++K A++G G+G+ FL H + H+ A E++ V+ + D + Sbjct: 35 IVDIAGLVKGANEGQGLGNAFLSHIRAVDAIFHLCRAFEDDDVTHVEGDVNPVRD-IEII 93 Query: 266 NSELRKKIEIVGLSQIDTVD 285 N ELR K + L+Q+D ++ Sbjct: 94 NEELRLKDQEYLLAQVDKME 113 >gi|218282280|ref|ZP_03488579.1| hypothetical protein EUBIFOR_01161 [Eubacterium biforme DSM 3989] gi|218216748|gb|EEC90286.1| hypothetical protein EUBIFOR_01161 [Eubacterium biforme DSM 3989] Length = 319 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I+G PNAGKST L ++ + K I +D P TT GI+ +++ D PGI K Sbjct: 26 IAIVGRPNAGKSTLLNALLKEKIAIMSDKPNTTRNNISGILTHEDCQYVFVDTPGIHKPQ 85 Query: 221 HQ 222 Q Sbjct: 86 QQ 87 >gi|197285696|ref|YP_002151568.1| GTP-binding protein EngA [Proteus mirabilis HI4320] gi|238693198|sp|B4EZS9|DER_PROMH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|194683183|emb|CAR43820.1| GTP-binding protein [Proteus mirabilis HI4320] Length = 496 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I I ++G PN GKST +TR + +AD+P T G + +EFI+ D G Sbjct: 1 MIPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELDGEEFIIIDTGG- 59 Query: 217 IKNAHQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I A +G + + L+ + ++L +V A + A Q I L + KK Sbjct: 60 IDGAEEGVETHMASQSLQAIQEADIVLFLVDA-RAGLMPADQGIAKHLRG----VEKKTY 114 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 +V ++ D +D DT L G++ F ++ G G+ Q++E Sbjct: 115 LVA-NKTDGIDIDTALADFYSLG--LGEI-FPIAASHGRGVSQLIE 156 >gi|221133872|ref|ZP_03560177.1| GTP-binding protein EngA [Glaciecola sp. HTCC2999] Length = 481 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 11/162 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGII-KN 219 + ++G PN GKST +T + +AD+P T G K ++FI+ D GI Sbjct: 5 LALVGRPNVGKSTLFNRLTNTRDALVADFPGLTRDRKYGQAKVEDRQFIVIDTGGITGDE 64 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A A + ++ L + V+L +V A + AA Q I + Y + K + +V + Sbjct: 65 AGIDAAMAEQSLLAIDEADVVLFLVDA-RAGLTAADQGI----AEYLRKQEKTVYVVA-N 118 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 ++D +D D+ + A G V + ++ G G+ Q+L+ Sbjct: 119 KVDGIDGDS--ESADFYALGMGNVQ-QIAAAHGRGVAQLLDL 157 >gi|54307962|ref|YP_128982.1| GTP-binding protein EngA [Photobacterium profundum SS9] gi|81828838|sp|Q6LU45|DER_PHOPR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|46912388|emb|CAG19180.1| putative GTP-binding protein [Photobacterium profundum SS9] Length = 493 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 10/134 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEEHEFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L +V A + DE A + R K Sbjct: 60 IDGTEEGVETKMAEQSLAAIEEADVVLFLVDG------RAGLTVSDEAIAKHLRSRDKPT 113 Query: 275 IVGLSQIDTVDSDT 288 + +++ID +D+D+ Sbjct: 114 FLVVNKIDGIDADS 127 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 21/173 (12%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IK 218 + IIG PN GKST + + + D P TT ++ +E++L D G+ K Sbjct: 207 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGQEYVLIDTAGVRRRK 266 Query: 219 NAHQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 N +Q + ++F LK E +V+L I+ A EN+ +L + L Sbjct: 267 NMNQ---VVEKFSVIQTLKAVEDANVVLLIIDA-RENISDQDLSLLGFVLNSGRSL---- 318 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECL 322 ++ +++ D +D++ R K+EL + G + F S++ G G+ + + + Sbjct: 319 -VLAVNKWDGLDNEVKERVKSELDRRLGFIDFARIHFISALHGTGVGHLYDSV 370 >gi|66805837|ref|XP_636640.1| hypothetical protein DDB_G0288609 [Dictyostelium discoideum AX4] gi|60465029|gb|EAL63136.1| hypothetical protein DDB_G0288609 [Dictyostelium discoideum AX4] Length = 398 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 161 DIGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 ++ IIG PNAGKST + S+ K ++ TT LGI + + + D PGIIKN Sbjct: 116 NVAIIGAPNAGKSTLVNSIVGEKICAVSPTEHTTRDAVLGIYSKDDTQILFHDTPGIIKN 175 Query: 220 AHQGAGI 226 ++ A + Sbjct: 176 FNRMAHV 182 >gi|320547277|ref|ZP_08041569.1| GTP-binding protein Era [Streptococcus equinus ATCC 9812] gi|320448081|gb|EFW88832.1| GTP-binding protein Era [Streptococcus equinus ATCC 9812] Length = 298 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 7 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDTEQIVFIDTPGIHK-- 64 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 65 -PKTALGDFMVESAYSTLREVETVLFMVPA-DEKRGKGDDMIIERLKAAKIPV-----IL 117 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ + ++ L D + Sbjct: 118 VINKIDKVHPDQLLEQIDDFRSQMDFKEIVP--ISALQGNNVETLINILKDNL 168 >gi|300706772|ref|XP_002995626.1| hypothetical protein NCER_101421 [Nosema ceranae BRL01] gi|239604803|gb|EEQ81955.1| hypothetical protein NCER_101421 [Nosema ceranae BRL01] Length = 536 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 31/54 (57%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+F+ ++RA+ ++ Y FTT +G Y + + D PGI+ Sbjct: 172 ICGFPNVGKSSFINKISRAEVEVQPYAFTTKSLYVGHFDYNYLNWQVIDTPGIL 225 >gi|170747912|ref|YP_001754172.1| GTP-binding proten HflX [Methylobacterium radiotolerans JCM 2831] gi|170654434|gb|ACB23489.1| GTP-binding proten HflX [Methylobacterium radiotolerans JCM 2831] Length = 470 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 16/177 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNA 220 + ++G NAGKS+ ++TRA+ D F TL P K + E IL+D G I + Sbjct: 231 VALVGYTNAGKSSLFNALTRAEVTAKDMLFATLDPTARATKLPHGETVILSDTVGFISDL 290 Query: 221 HQGAGIGDR-FLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 R L+ VLLH+ VS ++ QA +L EL S R IE+ Sbjct: 291 PTPLIAAFRATLEDAIEADVLLHVRDVSHVDSEAQAEDVGAVLRELGIETSADR-IIEV- 348 Query: 277 GLSQIDTVDSDTLARKKNELATQC-------GQVPFEFSSITGHGIPQILECLHDKI 326 ++ D +D D R N L+ Q P S++TG G+ + + ++ Sbjct: 349 -WNKADLLDDDERTRLLN-LSGQARARNDRDSAAPVLVSALTGEGLAALTSRIEARV 403 >gi|15835273|ref|NP_297032.1| GTP-binding protein HflX [Chlamydia muridarum Nigg] gi|270285446|ref|ZP_06194840.1| GTP-binding protein HflX [Chlamydia muridarum Nigg] gi|270289457|ref|ZP_06195759.1| GTP-binding protein HflX [Chlamydia muridarum Weiss] gi|301336843|ref|ZP_07225045.1| GTP-binding protein HflX [Chlamydia muridarum MopnTet14] gi|7190694|gb|AAF39482.1| GTP-binding protein HflX [Chlamydia muridarum Nigg] Length = 447 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 16/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I +IG N+GKST L +T A+ + F TL P V + +L D G I Sbjct: 226 IPTFALIGYTNSGKSTLLNLLTSAETYAENKLFATLDPKTRRCVLPCGQRVLLTDTVGFI 285 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 + H L+ +LLH+V A E+V+ + IL EL + ++ Sbjct: 286 RKLPHTLVAAFKSTLEAALHEDILLHVVDASHPLALEHVETT-KAILLELGIEHPQV--- 341 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I L++ID V + ++A K L+ P S+ TG GI +L+ + D + Sbjct: 342 --ITVLNKIDKVTNGSVAAKLRLLSPS----PVCVSAKTGEGIRDLLQAMADMV 389 >gi|305666362|ref|YP_003862649.1| putative GTP-binding protein [Maribacter sp. HTCC2170] gi|88708354|gb|EAR00591.1| putative GTP-binding protein [Maribacter sp. HTCC2170] Length = 296 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 2/85 (2%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + A V I TT + LGIV + IL+D PGIIK A Sbjct: 9 VNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGDDFQVILSDTPGIIKPA 68 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIV 244 ++ F+K E VLL++V Sbjct: 69 YELQSSMMDFVKSAFEDADVLLYMV 93 >gi|171911579|ref|ZP_02927049.1| hypothetical protein VspiD_10405 [Verrucomicrobium spinosum DSM 4136] Length = 431 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 16/171 (9%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKN- 219 I+G NAGKS+ L +T+++ D F TL + ++ +G ++ +L D G ++ Sbjct: 213 AIVGYTNAGKSSLLNKLTQSEVLAEDKLFATLDTSTRRMELPDG-QQLLLTDTVGFVRRL 271 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNSELRKKIEIV 276 H L+ T L+H+V A + Y+ +L E+ A + + I+ Sbjct: 272 PHDLVQSFRATLEETTLADFLIHVVDASHPSAHTFYETTTEVLKEIGAGDKRV-----IL 326 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 L+++D V ++ + +EL Q + S TG GI +L LH+ +F Sbjct: 327 VLNKMDLVTEES---RLHELKNQFPDA-VQISVQTGQGIDDLLHKLHEMVF 373 >gi|160935821|ref|ZP_02083196.1| hypothetical protein CLOBOL_00712 [Clostridium bolteae ATCC BAA-613] gi|158441565|gb|EDP19275.1| hypothetical protein CLOBOL_00712 [Clostridium bolteae ATCC BAA-613] Length = 699 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 17/148 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +G +G PN GK+T + T AK K+A++P T+ G + + D+PGI + Sbjct: 41 VGFVGNPNCGKTTLFNAFTGAKLKVANWPGVTVERVEGETSYKGRPIKVIDLPGI--YSL 98 Query: 222 QGAGIGDRFLKHTER---THVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIV 276 I ++ + V++++V S+LE N+ Q I EL+K + I+ Sbjct: 99 TSYTIEEKVTRKCIEDGGVDVIINVVDASSLERNLYLTMQLI---------ELKKPV-IL 148 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVP 304 L+ +D V+ + + L G++P Sbjct: 149 ALNMMDIVEERGMEIDMHRLPELLGEIP 176 >gi|228478255|ref|ZP_04062863.1| GTP-binding protein Era [Streptococcus salivarius SK126] gi|228249934|gb|EEK09204.1| GTP-binding protein Era [Streptococcus salivarius SK126] Length = 299 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 15/171 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAIIGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEPRGKGDNMIIERLKQAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + + TQ + S++ G+ + +++ L D + Sbjct: 119 VINKIDKVHPDQLLEQIEDFRTQMDFKEIIPISALQGNNVSHLVDVLSDNL 169 >gi|91774320|ref|YP_567012.1| small GTP-binding protein [Methanococcoides burtonii DSM 6242] gi|91713335|gb|ABE53262.1| GTP-binding domain protein [Methanococcoides burtonii DSM 6242] Length = 413 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 9/169 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + + G NAGKST S+ + ++ D FTTL P + + +L D G I++ Sbjct: 193 VALAGYTNAGKSTLFQSLVKEGVEVEDMLFTTLSPTTRSLSIKQRRVLLTDTVGFIEDLP 252 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE----IVG 277 + D F + + L V L ++ I +L + K+ E + Sbjct: 253 H--WMVDAF--RSTLDEIFLADVILLVVDMSDPLDVIRQKLVVSHDIFWKRTEGAEIVAV 308 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L++ D VD D L RK + ++ + S+ +G G +L+ +++ + Sbjct: 309 LNKADMVDPDDLERKVDAISYLAPHLVL-VSASSGDGFEVLLDTIYENL 356 >gi|300176385|emb|CBK23696.2| unnamed protein product [Blastocystis hominis] Length = 319 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 1/88 (1%) Query: 212 DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 D+ G+IK AH+G G+G++FL + V+LH+V E +D ++ + +R Sbjct: 5 DVAGLIKGAHKGEGLGNQFLSTIRQVSVILHVVRCFENPDIIHVNNHIDPINDIET-IRM 63 Query: 272 KIEIVGLSQIDTVDSDTLARKKNELATQ 299 ++++ LSQ++ ++ ++ A Q Sbjct: 64 ELQLADLSQLEKQKEKLTSKSRSSNAPQ 91 >gi|294675649|ref|YP_003576264.1| ferrous iron transport protein B [Rhodobacter capsulatus SB 1003] gi|294474469|gb|ADE83857.1| ferrous iron transport protein B-1 [Rhodobacter capsulatus SB 1003] Length = 779 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 21/167 (12%) Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 KLI +G +G PN GK+T ++T A+ ++ ++P T+ G ++G E L D+PG Sbjct: 3 KLI--VGTVGNPNCGKTTLFNALTGARQQVGNWPGVTVERKSGKFRDGTTEVELIDLPGT 60 Query: 217 IK-NAHQG-----AGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSE 268 +A +G I F+ E V+L+IV A LE N+ Q + E Sbjct: 61 YSLDASEGDLSLDEQIARDFVAARE-ADVVLNIVDASNLERNLYLTAQLL---------E 110 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 ++ + ++ ++ ID ++ L L+ G + + G G+ Sbjct: 111 MKVPV-VLAVNMIDIAEARGLKLDLAALSASLGCPVYGVVAAEGRGV 156 >gi|224476675|ref|YP_002634281.1| GTP-binding protein Era [Staphylococcus carnosus subsp. carnosus TM300] gi|254783663|sp|B9DNL3|ERA_STACT RecName: Full=GTPase Era gi|222421282|emb|CAL28096.1| putative GTP-binding protein Era [Staphylococcus carnosus subsp. carnosus TM300] Length = 299 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 8/93 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G++ E + I D PGI K Sbjct: 9 VAIIGRPNVGKSTFMNRVLGHKIAIMSDKAQTTRNKIHGVMTEDDAQIIFVDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEE 249 H+ +GD +K + T ++ +V+A EE Sbjct: 69 HK---LGDYMMKVAKNTLTEVDAVIFMVNANEE 98 >gi|323137543|ref|ZP_08072620.1| GTP-binding protein Era [Methylocystis sp. ATCC 49242] gi|322397169|gb|EFX99693.1| GTP-binding protein Era [Methylocystis sp. ATCC 49242] Length = 307 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 19/172 (11%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 ++G PNAGKST L + AK I TT GI +G + IL D PGI K Sbjct: 17 ALVGAPNAGKSTLLNQLVGAKVSIVSRKAQTTRALVRGIAIDGPAQIILVDTPGIFKPKR 76 Query: 222 Q--GAGIGDRFLKHTERTHVLLHIVS--ALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + A + T+ V L + + L+E V++ IL +L+ K +I+ Sbjct: 77 RLDRAMVASALSGATDADVVALLVDARRGLDEEVES----ILTQLAEV-----KAPKILV 127 Query: 278 LSQIDTVDSD---TLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L++ID + + LA K NE + F S++TG G+ + L ++ Sbjct: 128 LNKIDVIAREKLLALAAKMNERGK--FEETFMVSALTGDGVGDLRHALGKRM 177 >gi|315127880|ref|YP_004069883.1| protease GTPase subunit [Pseudoalteromonas sp. SM9913] gi|315016394|gb|ADT69732.1| protease GTPase subunit [Pseudoalteromonas sp. SM9913] Length = 429 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 15/172 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 I + ++G NAGKST +T + AD F TL P L + G ILAD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNRITNSDVYAADQLFATLDPTLRKLDIGDVGSVILADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 ++ H L T + LH++ + EN++ Q +L E+ A + Sbjct: 257 RHLPHDLVAAFKATLTETREADLQLHVIDVADPRRKENIEQV-QEVLKEIEADDVP---- 311 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 +++ ++ID +D T +++ + + S+ TG G + E + D Sbjct: 312 -QLLVYNKIDALDDVTPRIDRDD---EGQPIRVWLSAKTGEGCELLSEAISD 359 >gi|294101756|ref|YP_003553614.1| GTP-binding protein Era [Aminobacterium colombiense DSM 12261] gi|293616736|gb|ADE56890.1| GTP-binding protein Era [Aminobacterium colombiense DSM 12261] Length = 308 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 10/170 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKS+ L ++ K I ++ P TT GI E + + D PGI + Sbjct: 13 VPIVGRPNVGKSSLLNNILAYKVSIVSEKPQTTRNAIHGIYNEPEMQIVFTDTPGIHRPR 72 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL---RKKIEIV 276 H+ G + ++ E ++L++V + ++ I++ L ++ + KI+ V Sbjct: 73 HKLGEALVKAAVRSLENADLILYVVEVDDISISPEDDRIIEILQEVSTPIFLVVNKIDQV 132 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 S+ + +L ++K + G S+ G+ I ++++ L DK+ Sbjct: 133 QQSERRLMAVASLFKEKLPIVGALG-----VSAKKGYNIDKLVQILKDKL 177 >gi|270158385|ref|ZP_06187042.1| GTP-binding protein HflX [Legionella longbeachae D-4968] gi|289163370|ref|YP_003453508.1| GTPase [Legionella longbeachae NSW150] gi|269990410|gb|EEZ96664.1| GTP-binding protein HflX [Legionella longbeachae D-4968] gi|288856543|emb|CBJ10338.1| putative GTPase [Legionella longbeachae NSW150] Length = 419 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 7/111 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + ++G NAGKST ++T +A+ F TL P + + G I+ D G I++ Sbjct: 200 VSLVGYTNAGKSTLFNALTGESIYVANQLFATLDPTMRQLNLPGSSSVIVTDTVGFIRDL 259 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYN 266 H L+ T++ +LLH++ +NV + Q +LDEL ++ Sbjct: 260 PHHLVEAFRATLEETQQADLLLHVIDISDPHWRDNVFSVQQ-VLDELEVHD 309 >gi|148979611|ref|ZP_01815616.1| GTP-binding protein EngA [Vibrionales bacterium SWAT-3] gi|145961696|gb|EDK26993.1| GTP-binding protein EngA [Vibrionales bacterium SWAT-3] Length = 493 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT + +E++L D G+ + Sbjct: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMSRDEREYVLIDTAGVRRRK 267 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + + LK E +V+L ++ A E + L+A S ++ Sbjct: 268 NINETVEKFSVVKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRS------IVI 321 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D+D R K EL + G V F S++ G G+ + E + + Sbjct: 322 AVNKWDGLDNDVKERVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 373 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G + G EFI+ D GI Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAQLGEHEFIVIDTGGI 60 >gi|299067272|emb|CBJ38469.1| GTP-binding protein hflX, GTPase activity [Ralstonia solanacearum CMR15] Length = 417 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 28/183 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST ++T+A+ A+ F TL + + EG +L+D G I++ Sbjct: 204 VSLVGYTNAGKSTLFNALTKARAYAANQLFATLDTTSRRLYLEGLGNVVLSDTVGFIRDL 263 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV---SALEENVQAAYQCILDELSAYNSELRKKIEIV 276 Q L+ T VLLH+V SA++ +L E++A + +I+ Sbjct: 264 PTQLVAAFRATLEETVHADVLLHVVDAASAVKHEQMEQVDRVLAEINASDIP-----QIL 318 Query: 277 GLSQIDTVDSDTLARKKNELATQ--------CGQVPFEF-SSITGHGIPQILECLHDKIF 327 +++ID + EL TQ G V F S++ G G+ + E L + Sbjct: 319 VMNKIDAAE---------ELRTQGPRIERDEAGAVRRVFVSALEGAGLELLREALVETAI 369 Query: 328 SIR 330 +R Sbjct: 370 RLR 372 >gi|72161224|ref|YP_288881.1| small GTP-binding protein domain-containing protein [Thermobifida fusca YX] gi|71914956|gb|AAZ54858.1| Small GTP-binding protein domain [Thermobifida fusca YX] Length = 493 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 15/170 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + I G NAGKS+ L +T A + D F TL P + + + F L+D G +++ Sbjct: 274 VAIAGYTNAGKSSLLNRITGAGVLVEDALFATLDPTVRRARTPDGRLFTLSDTVGFVRHL 333 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKIEIV 276 HQ L+ ++LH+V + + A+ + + E+ A + E++ Sbjct: 334 PHQLVEAFRSTLEEVTEADLILHVVDGSHPDPEQQIASVRQVFAEIDATDIP-----ELI 388 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ID D L + + + G V E S+ TG GI ++L+ + + + Sbjct: 389 VINKIDAADETQLRQLRTKYP---GMV--EVSARTGEGIGELLQAIAEAL 433 >gi|541363|pir||B36933 Era homolog - Streptococcus mutans (fragment) gi|2749952|gb|AAC38048.1| G-protein [Streptococcus mutans] Length = 169 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 15/171 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEKRGKGDNMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q Q S++ G+ + +++ L D + Sbjct: 119 VINKIDKVHPDQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHL 169 >gi|257465498|ref|ZP_05629869.1| GTP-binding protein EngA [Actinobacillus minor 202] gi|257451158|gb|EEV25201.1| GTP-binding protein EngA [Actinobacillus minor 202] Length = 510 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 13/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G G +FI+ D G I + Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHANIGGYDFIVIDTGG-IDGS 63 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A V A D A R+K +V Sbjct: 64 EEGVEEKMAEQSLLAIEEADVVLFLVDARAGLVPA------DVGIAQYLRQREKTTVVVA 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G+V + ++ G G+ Q++E Sbjct: 118 NKTDGIDADSHCAEFYQLG--LGEVE-QIAAAQGRGVTQLIE 156 >gi|329895357|ref|ZP_08270982.1| GTP-binding protein HflX [gamma proteobacterium IMCC3088] gi|328922370|gb|EGG29714.1| GTP-binding protein HflX [gamma proteobacterium IMCC3088] Length = 428 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 16/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +T A AD F TL P L ++ + + ILAD G I Sbjct: 198 IPTVSLVGYTNAGKSTLFNHLTDADVYAADQLFATLDPTLRQLELDAIGQVILADTVGFI 257 Query: 218 KNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 AH + D F L+ T +L +V A + +LD L+ ++ + Sbjct: 258 --AHLPHKLVDAFNATLEETLNAELLCIVVDAASDQRDDNLHQVLDVLAEIGAD-----K 310 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQILECLHDKI 326 I L + +D L ++ + VP S+ TG G+ +LE + +++ Sbjct: 311 IPRLYVYNKLD---LLEQEPRIERDADGVPERVWLSAKTGAGLDLLLEAVAERL 361 >gi|242091397|ref|XP_002441531.1| hypothetical protein SORBIDRAFT_09g028770 [Sorghum bicolor] gi|241946816|gb|EES19961.1| hypothetical protein SORBIDRAFT_09g028770 [Sorghum bicolor] Length = 459 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 + ++G PN GKST + + K I D P TT + LGI E + IL D PG+IK Sbjct: 123 VAVLGKPNVGKSTLINQMVGQKLSIVTDKPQTTRHRILGICSEPEYQIILYDTPGVIKK 181 >gi|254512246|ref|ZP_05124313.1| GTP-binding protein Era [Rhodobacteraceae bacterium KLH11] gi|221535957|gb|EEE38945.1| GTP-binding protein Era [Rhodobacteraceae bacterium KLH11] Length = 302 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 I +IG PNAGKST L + AK I + T + G+ EG + + D PG+ K Sbjct: 8 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGEAQLVFVDTPGLFK 65 >gi|77411686|ref|ZP_00788025.1| GTP-binding protein Era [Streptococcus agalactiae CJB111] gi|77162258|gb|EAO73230.1| GTP-binding protein Era [Streptococcus agalactiae CJB111] Length = 299 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVETVLFMVPA-DEKRGKGDDMIIERLKAAKIPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ + +++ L D + Sbjct: 119 VINKIDKVHPDQLLEQIDDFRSQMDFKEVVP--ISALQGNNVSTLIKLLTDNL 169 >gi|320534682|ref|ZP_08035123.1| GTP-binding protein HflX [Actinomyces sp. oral taxon 171 str. F0337] gi|320133116|gb|EFW25623.1| GTP-binding protein HflX [Actinomyces sp. oral taxon 171 str. F0337] Length = 532 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 10/163 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 I + I G NAGKS+ + +T A + D F TL P + EG + + L D G Sbjct: 307 IPSVAIAGYTNAGKSSLMNRLTEAGIMVEDALFATLDPTVRRAETSEG-RTYTLTDTVGF 365 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 ++N H+ L+ ++LH+V A + + + LS L E+ Sbjct: 366 VRNLPHELIEAFRSTLEEVAGADLVLHVVDAAHPDPLSQVAAVRTVLSEIPGALDVP-EL 424 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 + L++ D D+ TLA + L S+ TG GI ++ Sbjct: 425 IVLNKTDLADAVTLAALRTGLPGAVA-----VSARTGEGIEEL 462 >gi|302422338|ref|XP_003008999.1| GTP-binding protein [Verticillium albo-atrum VaMs.102] gi|261352145|gb|EEY14573.1| GTP-binding protein [Verticillium albo-atrum VaMs.102] Length = 136 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 196 PNLGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 PN G EG + L D+ G++ AHQG G+G++FL L+H+V A Sbjct: 30 PNYGSCVEGTRSVPIELLDVAGLVPGAHQGKGLGNKFLDDLRHADALIHVVDA 82 >gi|321265750|ref|XP_003197591.1| nucleolar GTPase [Cryptococcus gattii WM276] gi|317464071|gb|ADV25804.1| Nucleolar GTPase, putative [Cryptococcus gattii WM276] Length = 666 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 17/183 (9%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+F+ VTRA + Y FTT +G + Y + + D PG++ + + Sbjct: 174 ICGYPNVGKSSFVNKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVIDTPGVLDHPLEE 233 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + + L H+ SA+ + + QC I + ++S + K I+ Sbjct: 234 MNTIE-----MQSITALAHLRSAVLYFMDLSEQCGYTIEAQCKLFHSIKPLFQNKPTILV 288 Query: 278 LSQIDTVDSDTLARKKNE-----LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 +++ID V L+ + LA + V E S+ T GI + D + + R E Sbjct: 289 INKIDIVRLSDLSEENRSYVDTVLADKSVTV-VEASTYTEEGIMNVRNTACDALLAHRVE 347 Query: 333 NEF 335 + Sbjct: 348 QKL 350 >gi|325106043|ref|YP_004275697.1| GTP-binding protein Era [Pedobacter saltans DSM 12145] gi|324974891|gb|ADY53875.1| GTP-binding protein Era [Pedobacter saltans DSM 12145] Length = 292 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PNAGKST + ++ K I TT + +GIV E + + +D PGIIK A Sbjct: 8 VSIVGKPNAGKSTLMNTLVGEKMAIITSKAQTTRHRIIGIVNEEDYQIVFSDTPGIIKPA 67 Query: 221 HQ 222 ++ Sbjct: 68 YK 69 >gi|254459845|ref|ZP_05073261.1| GTP-binding protein Era [Rhodobacterales bacterium HTCC2083] gi|206676434|gb|EDZ40921.1| GTP-binding protein Era [Rhodobacteraceae bacterium HTCC2083] Length = 302 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 13/167 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST + AK I + T + G+ EG + + D PG+ K Sbjct: 8 VALIGEPNAGKSTLTNRMVGAKVSIVTHKVQTTRARIRGVALEGASQLVFVDTPGLFKPT 67 Query: 221 HQ--GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + A + + + V+L I + V + IL+ L + +KI + + Sbjct: 68 RRLDRAMVAAAWGGAADADVVVLMIEA--NRGVTEGVERILEGLQDFGEH--RKIAL-AI 122 Query: 279 SQIDTVDSD---TLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 ++ID + S+ L+ K NE F S+ GHG+ + E L Sbjct: 123 NKIDRIKSEALLALSEKMNEAYPFVAT--FMISAERGHGVDALKEWL 167 >gi|330889505|gb|EGH22166.1| GTPase Era [Pseudomonas syringae pv. mori str. 301020] Length = 300 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I G PN GKST L + K I P TT + LGI EG + I D PG+ KN Sbjct: 12 VAIFGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGAVQAIYVDTPGMHKNG 71 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 72 EKAL---NRYMNKT 82 >gi|320100360|ref|YP_004175952.1| small GTP-binding protein [Desulfurococcus mucosus DSM 2162] gi|319752712|gb|ADV64470.1| small GTP-binding protein [Desulfurococcus mucosus DSM 2162] Length = 386 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 4/85 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G PN GKS + +T A+ IADYPF+T P G++K L D P + Sbjct: 84 VVVLGPPNTGKSMLVNKLTGARTVIADYPFSTTQPVPGMLKYEDIYIQLIDTPPL----S 139 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSA 246 +G+G+ ++ + LL ++ A Sbjct: 140 RGSGLINKIIGLARNADGLLIVLDA 164 >gi|94311038|ref|YP_584248.1| small GTP-binding protein domain-containing protein [Cupriavidus metallidurans CH34] gi|93354890|gb|ABF08979.1| GTP-binding protein (putative GTPase) [Cupriavidus metallidurans CH34] Length = 411 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKN- 219 I ++G NAGKST ++T+A+ AD F TL + + +G+ +L+D G I++ Sbjct: 204 ISLVGYTNAGKSTLFNALTKARAYAADQLFATLDTTSRRLFLDGFGNVVLSDTVGFIRDL 263 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 Q L T +LLH+V A Sbjct: 264 PTQLVAAFRATLDETVHADLLLHVVDA 290 >gi|317403345|gb|EFV83858.1| GTP-binding protein HflX [Achromobacter xylosoxidans C54] Length = 368 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST ++TRA AD F TL I EG +++D G I++ Sbjct: 192 VSLVGYTNAGKSTLFNALTRADTYAADQLFATLDTTTRRIWIEGAGNVVVSDTVGFIRDL 251 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 H L+ T +LLH+V A Sbjct: 252 PHDLIAAFRATLEETVHADLLLHVVDA 278 >gi|222529552|ref|YP_002573434.1| small GTP-binding protein [Caldicellulosiruptor bescii DSM 6725] gi|222456399|gb|ACM60661.1| small GTP-binding protein [Caldicellulosiruptor bescii DSM 6725] Length = 607 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 82/170 (48%), Gaps = 21/170 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I ++G PN GKS +T ++++YP TT+ N G YK++++ D PG+ I + Sbjct: 19 IALVGNPNVGKSVIFNKLTGRYVEVSNYPGTTVDVNYGF----YKDYVIVDTPGVYGISS 74 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + + + +T++ ++++V + L+ ++ Q I Y E+ IV Sbjct: 75 FNDEEIVTRDIVLNTQK---IINVVDSVHLDRDLFLTQQLI-----DYQKEV-----IVV 121 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 L+ +D V+ + + ++L G S+ G GI ++ E ++ +F Sbjct: 122 LNMVDEVEKNNITIAIDKLKESLGVEVIVTSASKGIGIDKLREAINKNLF 171 >gi|170038224|ref|XP_001846952.1| GTP-binding protein [Culex quinquefasciatus] gi|167881765|gb|EDS45148.1| GTP-binding protein [Culex quinquefasciatus] Length = 184 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 25/36 (69%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN 197 IGI+G+PN GKSTF +T++ ++PF T+ PN Sbjct: 54 IGIVGVPNVGKSTFFNVLTKSAAPAENFPFCTIDPN 89 >gi|254168430|ref|ZP_04875275.1| GTPase, putative [Aciduliprofundum boonei T469] gi|289595771|ref|YP_003482467.1| small GTP-binding protein [Aciduliprofundum boonei T469] gi|197622711|gb|EDY35281.1| GTPase, putative [Aciduliprofundum boonei T469] gi|289533558|gb|ADD07905.1| small GTP-binding protein [Aciduliprofundum boonei T469] Length = 317 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 4/76 (5%) Query: 146 LGQEKIIWLKLKLI----ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV 201 LGQ + I KL I + I G PN GKS ++ ++ AKP+IA YPFTT +G + Sbjct: 145 LGQVRDIIRKLPDINPELPTVVIAGYPNVGKSELVSKMSTAKPEIASYPFTTKGIVVGHM 204 Query: 202 KEGYKEFILADIPGII 217 + + + D PG++ Sbjct: 205 EIRGRRVQIVDTPGLL 220 >gi|71280742|ref|YP_270776.1| GTP-binding protein Era [Colwellia psychrerythraea 34H] gi|71146482|gb|AAZ26955.1| GTP-binding protein Era [Colwellia psychrerythraea 34H] Length = 305 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L ++ K I + P TT + LGI+ E ++ +L D PG+ Sbjct: 13 IAIVGRPNVGKSTLLNALLGQKISITSKKPQTTRHRILGILTEENRQAVLVDTPGL 68 >gi|58262508|ref|XP_568664.1| nucleolar GTP-binding protein 1 [Cryptococcus neoformans var. neoformans JEC21] gi|134119008|ref|XP_772007.1| hypothetical protein CNBN1850 [Cryptococcus neoformans var. neoformans B-3501A] gi|50254611|gb|EAL17360.1| hypothetical protein CNBN1850 [Cryptococcus neoformans var. neoformans B-3501A] gi|57230838|gb|AAW47147.1| nucleolar GTP-binding protein 1, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 666 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 13/181 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+F+ VTRA + Y FTT +G + Y + + D PG++ + + Sbjct: 174 ICGYPNVGKSSFVNKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVIDTPGVLDHPLEE 233 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAY----QCILDELSAYNSELRKKIEIVGLS 279 + T H+ ++ ++ + Q Y QC L + + K I+ ++ Sbjct: 234 MNTIE-MQSITALAHLRSAVLYFMDLSEQCGYTIEAQCKL--FQSIKPLFQNKPTILVIN 290 Query: 280 QIDTVDSDTLARKKNE-----LATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 +ID V L+ + LA + V E S+ T GI + D + + R E + Sbjct: 291 KIDIVRLADLSEENRSYVDTILADKSVTV-VEASTYTEEGIMNVRNTACDALLAHRVEQK 349 Query: 335 F 335 Sbjct: 350 L 350 >gi|21672838|ref|NP_660905.1| GTP-binding protein EngA [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|8134425|sp|O51881|DER_BUCAP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|2827027|gb|AAC38119.1| ORF453 hypothetical protein [Buchnera aphidicola] gi|21623492|gb|AAM68116.1| probable GPT-binding protein EngA [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 453 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 14/140 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I IG PN GKST + S+ K I ++ TTL L +K YK +I D G+ K Sbjct: 188 VKIACIGKPNVGKSTLINSLLMKKRMITSNKAGTTLDTVLVPIKYNYKNYIFIDTAGMSK 247 Query: 219 NAHQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 + I + L+ E++H+ L I+ A + Q + Q +L LS++ + K + Sbjct: 248 KKSKTNKIEKFCKIKTLQTIEKSHLTLLIIDAKD---QISKQDLL--LSSFIEKSGKPLI 302 Query: 275 IVGLSQIDTVDSDTLARKKN 294 IV I+ D +L KKN Sbjct: 303 IV----INKCDLLSLKEKKN 318 >gi|241890023|ref|ZP_04777321.1| GTP-binding protein Era [Gemella haemolysans ATCC 10379] gi|241863645|gb|EER68029.1| GTP-binding protein Era [Gemella haemolysans ATCC 10379] Length = 302 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 32/157 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PNAGKST L ++ + K I +D P TT G+ + + + D PGI K Sbjct: 11 VTIIGRPNAGKSTLLNNILKQKIAIMSDKPQTTRNIINGVYTDNDSQIVFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLK-------HTERTHVLL-----------HIVSALEENVQAAYQCI---- 258 H+ +GD +K +E ++++ H+++ ++E + I Sbjct: 71 HR---LGDYMMKLASSAIQESEIVYLIINASEKFGPGDQHLINIVKELKVPTFLLINKID 127 Query: 259 ------LDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 L ++ + +L +EIV +S + +++ D L Sbjct: 128 LISPEQLIQIIEFYKDLYDFVEIVPISALKSINVDNL 164 >gi|85057390|ref|YP_456306.1| GTP-binding protein Era [Aster yellows witches'-broom phytoplasma AYWB] gi|84789495|gb|ABC65227.1| GTP-binding protein Era [Aster yellows witches'-broom phytoplasma AYWB] Length = 295 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I+G PN GKST L ++T+ K I P TT +GI + ++I D PGI + Sbjct: 12 IAILGRPNVGKSTLLNALTQQKVAITSAKPQTTRNKIIGICHDSNAQYIFVDTPGINQYK 71 Query: 221 H 221 H Sbjct: 72 H 72 >gi|85705113|ref|ZP_01036213.1| GTP-binding protein Era [Roseovarius sp. 217] gi|85670435|gb|EAQ25296.1| GTP-binding protein Era [Roseovarius sp. 217] Length = 301 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 I +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 8 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGQSQLVFVDTPGLFQ 65 >gi|330894498|gb|EGH27159.1| GTP-binding protein Der [Pseudomonas syringae pv. mori str. 301020] Length = 490 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 11/166 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR + I D T G K + +IL D GI Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60 Query: 217 IKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + H + ++ L + V+L +V A +A Y D++ + R K Sbjct: 61 SGDEHGMDEKMAEQSLLAIKEADVVLFLVDA-----RAGYTA-ADQMIGEHLRKRNKRSY 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 V ++ID +D + LAR + +P + G GI Q+LE Sbjct: 115 VVANKIDNID-ENLARAEFSPMGLGDAIP--VAGAHGRGISQMLEI 157 >gi|331004918|ref|ZP_08328332.1| GTP-binding protein Era [gamma proteobacterium IMCC1989] gi|330421268|gb|EGG95520.1| GTP-binding protein Era [gamma proteobacterium IMCC1989] Length = 299 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 12/170 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I+G PN GKST L + K I P TT + LGI +FI D PG+ Sbjct: 11 IAIVGRPNVGKSTLLNHILGQKLSITSRKPQTTRHKLLGIKTTEDTQFIYVDTPGL---- 66 Query: 221 HQGAGIG-DRFLKHTERTHVL-LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 HQG +R++ T + + +V + E +Q + DE A K I+ + Sbjct: 67 HQGQKKAINRYMNRAVTTAIQDVDVVLFMIEKLQWLPE---DEAVAQRLAEIKSPVILVI 123 Query: 279 SQIDTV-DSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECLHDKI 326 +++DT+ D +TL +L Q Q S++ + ++ E + ++ Sbjct: 124 NKVDTIDDKETLLPHMQKLLEQVNVQEVIPVSALNNQNLDRLEEIIRVRL 173 >gi|312884308|ref|ZP_07744017.1| GTP-binding protein EngA [Vibrio caribbenthicus ATCC BAA-2122] gi|309368081|gb|EFP95624.1| GTP-binding protein EngA [Vibrio caribbenthicus ATCC BAA-2122] Length = 495 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR++ +AD+P T G K G EFI+ D GI Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 209 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRK 268 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK E +V+L ++ A E + L+A S ++ Sbjct: 269 RINETVEKFSVVKTLKAIEDANVVLLVIDARENISDQDLSLLGFALNAGRS------IVL 322 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D D K EL + G V F S++ G G+ + E + + Sbjct: 323 AVNKWDGLDMDVKEHVKKELDRRLGFVDFARLHFISALHGTGVGHLFESVQE 374 >gi|308176886|ref|YP_003916292.1| GTPase [Arthrobacter arilaitensis Re117] gi|307744349|emb|CBT75321.1| putative GTPase [Arthrobacter arilaitensis Re117] Length = 553 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 21/180 (11%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE----FIL 210 K + + I G NAGKS+ L +T A + + F TL P V++ E + L Sbjct: 327 KRNAVPAVAIAGYTNAGKSSLLNRLTNAGVLVENALFATLDPT---VRQSATEDGLTYTL 383 Query: 211 ADIPGIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYN 266 AD G + N Q L+ + ++LH+V + + A + +L E+ A N Sbjct: 384 ADTVGFVSNLPTQLVEAFRSTLEEIADSDLILHVVDGSHPDPEGQIQAVRTVLGEVDALN 443 Query: 267 SELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI+ +++ D D + R +N + S+ TG GI ++LE + I Sbjct: 444 IP-----EIIVVNKADVADPFVIERIRNRESNTAV-----VSAHTGEGIEELLEKISSSI 493 >gi|242046858|ref|XP_002461175.1| hypothetical protein SORBIDRAFT_02g042356 [Sorghum bicolor] gi|241924552|gb|EER97696.1| hypothetical protein SORBIDRAFT_02g042356 [Sorghum bicolor] Length = 51 Score = 42.0 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 17/29 (58%), Positives = 23/29 (79%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKI 186 L+AD+GI+G PNA KST L+ ++ AKP I Sbjct: 2 LVADVGIVGAPNAKKSTLLSVISAAKPAI 30 >gi|195500650|ref|XP_002097463.1| GE26231 [Drosophila yakuba] gi|194183564|gb|EDW97175.1| GE26231 [Drosophila yakuba] Length = 373 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 24/155 (15%) Query: 162 IGIIGLPNAGKSTFLASVT--RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 I +IG+PN GKSTF+ + R P A TT N I G + + D PG++ Sbjct: 62 IAVIGVPNVGKSTFINNTVNHRVCPTSAKV-HTTRQSNTAIFTTGQTQLVFYDTPGLVTQ 120 Query: 220 AHQGAGIGDRFLKHTERTHVLLH--IVSALEENVQA-----AYQCILDELSAYNS----- 267 D+ K R H + H I++ + + A + +LD L AY++ Sbjct: 121 HEIRRHHLDQNFKSAYR-HAIQHADIIAVVHDASNAWTRKELHPTVLDTLKAYSNLPSFL 179 Query: 268 ------ELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+ K ++ L I T+ +DTL K E+ Sbjct: 180 VLNKIDALKSKRLLLDL--IKTLTNDTLTVGKREV 212 >gi|167627766|ref|YP_001678266.1| protease, GTP-binding subunit [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597767|gb|ABZ87765.1| protease, GTP-binding subunit [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 435 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 2/97 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I +G NAGKST +T A D F TL P L ++ E I +D G I Sbjct: 201 IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSDTVGFI 260 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA 253 KN H L+ + +L+H++ +E+ ++ Sbjct: 261 KNLPHDLVEAFHATLEEAIESDLLVHVIDYADEDYKS 297 >gi|307132056|ref|YP_003884072.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Dickeya dadantii 3937] gi|306529585|gb|ADM99515.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Dickeya dadantii 3937] Length = 495 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 14/136 (10%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D GI Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGNEFIIIDTGGI 60 Query: 217 IKNAHQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 N G+ R + + E ++L +V A + + A D A + +R+K Sbjct: 61 DGNED---GVETRMAEQSLLAIEEADIVLFLVDARDGLMPA------DHAIAQHLRMREK 111 Query: 273 IEIVGLSQIDTVDSDT 288 + +++D +D DT Sbjct: 112 DTFLVANKVDGIDIDT 127 >gi|285017959|ref|YP_003375670.1| GTP-binding protein hflx [Xanthomonas albilineans GPE PC73] gi|283473177|emb|CBA15683.1| probable gtp-binding protein hflx [Xanthomonas albilineans] Length = 441 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 1/86 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 I ++G NAGKST ++T A+ AD F TL P + + +LAD G +++ Sbjct: 201 IAVVGYTNAGKSTLFNALTGAEAYAADQLFATLDPTVRRIALPGGNAMLADTVGFVRDLP 260 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA 246 H+ L LLH+V A Sbjct: 261 HELVAAFRSTLSEAREADFLLHVVDA 286 >gi|195329386|ref|XP_002031392.1| GM24072 [Drosophila sechellia] gi|194120335|gb|EDW42378.1| GM24072 [Drosophila sechellia] Length = 373 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 80/194 (41%), Gaps = 41/194 (21%) Query: 162 IGIIGLPNAGKSTFLASVT--RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 I +IG+PN GKSTF+ + R P A TT N I G + + D PG++ Sbjct: 62 IAVIGVPNVGKSTFINNTVNHRVCPTSAKV-HTTRQSNTAIYTIGQTQLVFYDTPGLVTQ 120 Query: 220 AHQGAGIGDRFLKHTERTHVLLH--IVSALEENVQA-----AYQCILDELSAYNS----- 267 D+ K R H + H I++ + + A + +LD L AY++ Sbjct: 121 HEIRRHHLDQNFKSAYR-HAIQHADIIAVVHDASNAWTRKELHPTVLDTLKAYSNLPSFL 179 Query: 268 ------ELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP----------------- 304 L+ K ++ L I T+ +DTL K E+ + V Sbjct: 180 VLNKIDALKSKRLLLDL--IKTLTNDTLTVGKREVQAKSAPVKEIRINKRESSWSHFTDV 237 Query: 305 FEFSSITGHGIPQI 318 F S++TG+G+ ++ Sbjct: 238 FLVSALTGNGLQEM 251 >gi|300867293|ref|ZP_07111952.1| ferrous iron transport protein B [Oscillatoria sp. PCC 6506] gi|300334698|emb|CBN57118.1| ferrous iron transport protein B [Oscillatoria sp. PCC 6506] Length = 597 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 3/93 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I ++G+PN GKSTF +T A +I ++P T+ + V+ G + + D+PGI + Sbjct: 4 IAVVGMPNTGKSTFFNRITGANARIGNWPGITVDLMVAKVQLGNEAAEMVDLPGIYDLHG 63 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 + + FL++ H++L I++A + + Q Sbjct: 64 FSEDEQVVRNFLENNP-IHLVLMILNATQIDRQ 95 >gi|241668330|ref|ZP_04755908.1| protease, GTP-binding subunit [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876863|ref|ZP_05249573.1| protease, GTP-binding subunit [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842884|gb|EET21298.1| protease, GTP-binding subunit [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 435 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 2/97 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I +G NAGKST +T A D F TL P L ++ E I +D G I Sbjct: 201 IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSDTVGFI 260 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA 253 KN H L+ + +L+H++ +E+ ++ Sbjct: 261 KNLPHDLVEAFHATLEEAIESDLLVHVIDYADEDYKS 297 >gi|258404454|ref|YP_003197196.1| ferrous iron transport protein B [Desulfohalobium retbaense DSM 5692] gi|257796681|gb|ACV67618.1| ferrous iron transport protein B [Desulfohalobium retbaense DSM 5692] Length = 725 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 15/169 (8%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IK 218 + + G PN+GK+T ++T ++ + +YP T+ G V+ +E + D+PG + Sbjct: 6 SVALAGNPNSGKTTLFNALTGSRQHVGNYPGITVDKKEGFVQAAGQELHIVDLPGTYSLT 65 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 Q + FL T R V++ + S+LE N+ A Q + E+ + +V Sbjct: 66 AYSQEELVARNFLADT-RPDVVVDVANASSLERNLYLAVQFL---------EMGAPLVLV 115 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDK 325 L+ ID LA + L+ + G E + G G +L+ + + Sbjct: 116 -LNMIDEARKHGLAIDSDLLSQRLGVPVVETVARYGQGKQALLKAVQQR 163 >gi|89256256|ref|YP_513618.1| protease, GTP-binding subunit [Francisella tularensis subsp. holarctica LVS] gi|115314713|ref|YP_763436.1| protease, GTP-binding subunit [Francisella tularensis subsp. holarctica OSU18] gi|167011007|ref|ZP_02275938.1| GTP-binding protein HflX [Francisella tularensis subsp. holarctica FSC200] gi|290953596|ref|ZP_06558217.1| protease, GTP-binding subunit [Francisella tularensis subsp. holarctica URFT1] gi|295313097|ref|ZP_06803787.1| protease, GTP-binding subunit [Francisella tularensis subsp. holarctica URFT1] gi|89144087|emb|CAJ79338.1| protease, GTP-binding subunit [Francisella tularensis subsp. holarctica LVS] gi|115129612|gb|ABI82799.1| GTP-binding protein HflX [Francisella tularensis subsp. holarctica OSU18] Length = 435 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 15/162 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I +G NAGKST +T A D F TL P L ++ E I +D G I Sbjct: 201 IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEIIFSDTVGFI 260 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS-----------AY 265 KN H L+ + +L+H++ +E+ ++ + + LS Y Sbjct: 261 KNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIADKETICVY 320 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF 307 N K+E + S + DSD+ + L+ Q G EF Sbjct: 321 NK--IDKLENIKPSFVPLEDSDSSVVSRVYLSAQNGDGLVEF 360 >gi|323306999|gb|EGA60283.1| Nog1p [Saccharomyces cerevisiae FostersO] Length = 647 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 28/54 (51%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL +T++ + Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLRCITKSDVDVQPYAFTTRSLYVGHFDYKYLRFQAIDTPGIL 225 >gi|213964488|ref|ZP_03392688.1| ferrous iron transport protein B [Corynebacterium amycolatum SK46] gi|213952681|gb|EEB64063.1| ferrous iron transport protein B [Corynebacterium amycolatum SK46] Length = 661 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 33/54 (61%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 + ++G PN+GKST S+T AK ++ ++P TT+ + G K E+ + D PG Sbjct: 34 VAVVGAPNSGKSTLFNSLTGAKAQMGNWPGTTVEVSRGAWKTDAAEYDVIDFPG 87 >gi|254469267|ref|ZP_05082672.1| GTP-binding protein Era [Pseudovibrio sp. JE062] gi|211961102|gb|EEA96297.1| GTP-binding protein Era [Pseudovibrio sp. JE062] Length = 320 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 13/170 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST L + K I + TT G+ E + I D PGI + Sbjct: 31 VALIGAPNAGKSTLLNQLVGTKVSIVTHKVQTTRAIVRGVAIEDDSQVIFVDTPGIFRPK 90 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + + D + V+ ++ A ++ + A + IL+EL E K +++ L+ Sbjct: 91 RRLDRAMVDTAWGGAKDADVVAVLIDA-KKGINEAVERILNEL-----EHIKLPKVLILN 144 Query: 280 QIDTVDSDT---LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +ID + LA K NE T+ Q F S+I G G IL+ +++ Sbjct: 145 KIDITKREQLLELAAKANEY-TKFDQT-FMVSAINGSGTKDILKYFSEQM 192 >gi|119476420|ref|ZP_01616771.1| GTP-binding protein Era [marine gamma proteobacterium HTCC2143] gi|119450284|gb|EAW31519.1| GTP-binding protein Era [marine gamma proteobacterium HTCC2143] Length = 301 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST L + K I P TT + LGI E + I D PGI K Sbjct: 10 VAIIGRPNVGKSTLLNHILGQKISITSRKPQTTRHRVLGIKTENNTQAIFVDTPGIHKGT 69 Query: 221 HQGAGIGDRFL 231 I +R++ Sbjct: 70 ESDKAI-NRYM 79 >gi|302518983|ref|ZP_07271325.1| GTP-binding protein Era [Streptomyces sp. SPB78] gi|302427878|gb|EFK99693.1| GTP-binding protein Era [Streptomyces sp. SPB78] Length = 392 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 19/218 (8%) Query: 105 ICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIG- 163 +C R P +GG G +S A + + + G ++ + A Sbjct: 31 VCRAASPEWRRSACPSASGGSGGVCRAASAGAARWPGSAALGGSGRMARMSEPSTAPAAP 90 Query: 164 -------IIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPG 215 +G PNAGKST ++ K I ++ P TT + GIV + IL D PG Sbjct: 91 HRAGFACFVGRPNAGKSTLTNALVGQKVAITSNRPQTTRHTVRGIVHRPEAQLILVDTPG 150 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKK 272 + K +G+R T + ++ ++ + + I EL+ +++ Sbjct: 151 LHKPRTL---LGERLNDVVRATWAEVDVIGFCLPADQKIGPGDRFIAKELAG----IKRT 203 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSI 310 ++ +++ D VDS LA + + ++ FE++ I Sbjct: 204 PKVAIVTKTDLVDSKRLAEQLMAIDALGRELGFEWAEI 241 >gi|302679814|ref|XP_003029589.1| hypothetical protein SCHCODRAFT_69329 [Schizophyllum commune H4-8] gi|300103279|gb|EFI94686.1| hypothetical protein SCHCODRAFT_69329 [Schizophyllum commune H4-8] Length = 661 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 30/54 (55%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+F+ VTRA + Y FTT +G + Y + + D PG++ Sbjct: 173 ICGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHLDYKYLRWQVIDTPGVL 226 >gi|149200804|ref|ZP_01877779.1| GTP-binding protein Era [Roseovarius sp. TM1035] gi|149145137|gb|EDM33163.1| GTP-binding protein Era [Roseovarius sp. TM1035] Length = 301 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 I +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 8 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGQSQLVFVDTPGLFQ 65 >gi|62259927|gb|AAX77873.1| unknown protein [synthetic construct] Length = 332 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 154 LKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILAD 212 L++K I IIG PN GKST L ++ + K I P TT + GI G +FI D Sbjct: 25 LEMKKCGYISIIGRPNVGKSTLLNNILKYKVSITSRKPQTTRHQITGIKTLGDTQFIYVD 84 Query: 213 IPGI 216 PGI Sbjct: 85 TPGI 88 >gi|87124180|ref|ZP_01080030.1| ferrous iron transport protein B [Synechococcus sp. RS9917] gi|86168749|gb|EAQ70006.1| ferrous iron transport protein B [Synechococcus sp. RS9917] Length = 198 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 13/147 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY--KEFILADIPGI--I 217 + +IG+PN GKST +T +IA++P T+ G + + + L D+PGI Sbjct: 1 MALIGMPNTGKSTLYNRLTGGNAQIANWPGLTVELLRGAMPADRRGRAYELVDLPGIHDF 60 Query: 218 KNAHQGAGIGDRFLKHTERTHVLL-----HIVSALE--ENVQAAYQCILDELSAYNSELR 270 + + + RF+++T VL+ I S L +QA ++ L+ + R Sbjct: 61 SGSSEDEAVVQRFMRNTPPDLVLVVLNASQITSQLRLLMQIQALGLPVVAALNMSDEAQR 120 Query: 271 KKIEI--VGLSQIDTVDSDTLARKKNE 295 IEI GLSQ + ++ K+N+ Sbjct: 121 FGIEINHEGLSQALGLPLLPVSAKRNQ 147 >gi|260773381|ref|ZP_05882297.1| GTP-binding protein EngA [Vibrio metschnikovii CIP 69.14] gi|260612520|gb|EEX37723.1| GTP-binding protein EngA [Vibrio metschnikovii CIP 69.14] Length = 496 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G K G EFI+ D GI Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGENEFIVIDTGGI 60 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 210 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMQRDDREYVLIDTAGVRRRK 269 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK E +V+L ++ A E + L+A S ++ Sbjct: 270 SINETVEKFSVVKTLKAIEDANVVLLVIDARENISDQDLSLLGFTLNAGRS------VVI 323 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D + +D R K EL + G V F S++ G G+ + E + + Sbjct: 324 AINKWDGLSNDIKERVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 375 >gi|75812451|ref|YP_320070.1| ferrous iron transport protein B [Anabaena variabilis ATCC 29413] gi|75705207|gb|ABA24881.1| Ferrous iron transport protein B [Anabaena variabilis ATCC 29413] Length = 778 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 17/175 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I ++G PN GK+T ++T A + ++P T+ G K + D+PG+ Sbjct: 6 IALVGNPNCGKTTLFNALTGANQRTGNWPGVTVERKEGKYIHNGKNITVVDLPGVYSLDA 65 Query: 222 QGAGIG-DRFLKH----TERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + + G D + V+++IV A LE N+ Q + E+R + Sbjct: 66 EDSDTGLDELIARDYLLAGEADVIINIVDASNLERNLYLTTQIM---------EMRLPM- 115 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 IV L+ +D + L+ + G S+ +G G+P++ + ++ + ++ Sbjct: 116 IVALNMMDVAKDREIKINPTLLSQRLGCPVIPMSATSGKGVPELQDAINQSLVNL 170 >gi|152986375|ref|YP_001350991.1| GTP-binding proten HflX [Pseudomonas aeruginosa PA7] gi|150961533|gb|ABR83558.1| GTP-binding proten HflX [Pseudomonas aeruginosa PA7] Length = 433 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 2/103 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T ++ A+ F TL P L ++ + +LAD G I Sbjct: 198 IPAVSLVGYTNAGKSTLFNALTSSEVYAANQLFATLDPTLRRLQLDDLGPVVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL 259 ++ H+ L+ + +LLH++ A E A + +L Sbjct: 258 RHLPHKLVEAFRATLEESSNADLLLHVIDAHEPERDAQIEQVL 300 >gi|84496882|ref|ZP_00995736.1| putative ATP/GTP-binding protein [Janibacter sp. HTCC2649] gi|84383650|gb|EAP99531.1| putative ATP/GTP-binding protein [Janibacter sp. HTCC2649] Length = 493 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 19/175 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 I + I G NAGKS+ L +T A + + F TL P + +G +EF D G Sbjct: 274 IPSVAIAGYTNAGKSSILNRLTGAGVLVQNQLFATLDPTVRRSETPDG-REFTFTDTVGF 332 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKK 272 +++ HQ L+ + +LLH+V + + +A + +L ++ A + + Sbjct: 333 VRHLPHQLVEAFRSTLEEVAESDLLLHVVDGSHPDPEGQISAVRSVLADVDATDVK---- 388 Query: 273 IEIVGLSQIDTVDSDTLAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E++ +++ D DS+ + R ++NE + S+ TG G+ ++ + D++ Sbjct: 389 -EVIVVNKADIADSEVIDRLRRNE------KHVIVVSARTGAGMDALVALIADEL 436 >gi|254283960|ref|ZP_04958928.1| ferrous iron transport protein B [gamma proteobacterium NOR51-B] gi|219680163|gb|EED36512.1| ferrous iron transport protein B [gamma proteobacterium NOR51-B] Length = 610 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 14/170 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK----N 219 ++G PN+GKS+ +T K+A++P T+ G + + L D PG + Sbjct: 6 LVGSPNSGKSSLFNRLTGLSQKVANFPGITVDVTSGSLL-ALPDVELVDFPGTYSLQAIS 64 Query: 220 AHQGAGIG--DRFLKHTERTHVLLHI-VSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 A + + R L E HVL + + LE+++ Q I D ++ K+ V Sbjct: 65 AEEEVAVEYFRRALADPEVRHVLCVVDATRLEKSLYFTLQVIRD------AQHHGKLITV 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + D +D + L + LA + G S+ +G GI I++ L D + Sbjct: 119 LANMADIIDRNNLTLDADALAAEIGAPVLMVSAKSGSGIESIIDRLRDAL 168 >gi|126643012|ref|YP_001085996.1| GTP-binding protein [Acinetobacter baumannii ATCC 17978] gi|184159512|ref|YP_001847851.1| GTPase [Acinetobacter baumannii ACICU] gi|260558115|ref|ZP_05830325.1| GTP-binding protein HflX [Acinetobacter baumannii ATCC 19606] gi|332873495|ref|ZP_08441446.1| GTP-binding protein HflX [Acinetobacter baumannii 6014059] gi|126388896|gb|ABO13394.1| GTP-binding protein [Acinetobacter baumannii ATCC 17978] gi|183211106|gb|ACC58504.1| GTPase [Acinetobacter baumannii ACICU] gi|260408388|gb|EEX01696.1| GTP-binding protein HflX [Acinetobacter baumannii ATCC 19606] gi|322509424|gb|ADX04878.1| GTPase [Acinetobacter baumannii 1656-2] gi|323519445|gb|ADX93826.1| GTPase [Acinetobacter baumannii TCDC-AB0715] gi|332738320|gb|EGJ69196.1| GTP-binding protein HflX [Acinetobacter baumannii 6014059] Length = 444 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 7/126 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST + ++ AD F TL P L ++ +G +LAD G + Sbjct: 199 IPTVSLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLADTVGFV 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELR--K 271 +N H L+ T +LLH++ + ++ A + +L E+ A LR Sbjct: 259 RNLQHDLVESFKATLEETLEATLLLHVIDSSSHDMLDQIEAVEGVLKEIGADAPVLRVYN 318 Query: 272 KIEIVG 277 KI++ G Sbjct: 319 KIDLSG 324 >gi|78485431|ref|YP_391356.1| small GTP-binding protein domain-containing protein [Thiomicrospira crunogena XCL-2] gi|78363717|gb|ABB41682.1| Conserved hypothetical protein with a GTPase domain [Thiomicrospira crunogena XCL-2] Length = 436 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 39/87 (44%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 I IIG NAGKST +TRA D F TL L V G I AD G I++ Sbjct: 203 ITIIGYTNAGKSTLFNQMTRASVYAEDRLFATLDSTLRKVHLPGAGPVIFADTVGFIRHI 262 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 H L+ T +L+H+V A Sbjct: 263 PHDLVAAFRSTLEETSEADLLIHLVDA 289 >gi|186681007|ref|YP_001864203.1| GTP-binding protein Era [Nostoc punctiforme PCC 73102] gi|186463459|gb|ACC79260.1| GTP-binding protein Era [Nostoc punctiforme PCC 73102] Length = 318 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 74/171 (43%), Gaps = 22/171 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 IGI+G PN GKST + + K I T L GI+ + I D PGI K Sbjct: 29 IGIVGRPNVGKSTLMNQLVGQKIAITSPIAQTTRNRLRGILTTPEAQLIFVDTPGIHKPH 88 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL---RKKI 273 HQ +G+ +++ E V+L +V A C Y +EL K Sbjct: 89 HQ---LGEVLVQNAKIAIESVDVVLFVVD-------GAVAC--GSGDRYIAELLSRSKTP 136 Query: 274 EIVGLSQIDTVDSDT--LARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 I+G+++ D SD+ L ++A +FS+ T G+PQ+ E L Sbjct: 137 VILGVNKTDQQPSDSQFLDDSYAQMAQSHEWEIVKFSAKTSAGLPQLQELL 187 >gi|313201423|ref|YP_004040081.1| GTP-binding proten hflx [Methylovorus sp. MP688] gi|312440739|gb|ADQ84845.1| GTP-binding proten HflX [Methylovorus sp. MP688] Length = 379 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 32/184 (17%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL--------YPNLGIVKEGYK 206 K L+ + ++G NAGKST +T++ AD F TL P+ G V Sbjct: 194 KRSLVMSVSLVGYTNAGKSTLFNRLTQSGVYAADQLFATLDTTSRKLYIPDGGPV----- 248 Query: 207 EFILADIPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVSA---LEENVQAAYQCILD 260 +L+D G IK H + + F L+ + +LLH+V A + ++ A +L+ Sbjct: 249 --VLSDTVGFIK--HLPHALVEAFGATLEEAVQADLLLHVVDAASPVRDDQIAQVNKVLE 304 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 E+ A + +++ L+QID + +++E C S+ TG G+ + + Sbjct: 305 EIGAEHVH-----QVLVLNQIDRAGLEP-GLERDEYGRICR---IRISAKTGEGLELVRQ 355 Query: 321 CLHD 324 CL + Sbjct: 356 CLRE 359 >gi|307154522|ref|YP_003889906.1| GTP-binding proten HflX [Cyanothece sp. PCC 7822] gi|306984750|gb|ADN16631.1| GTP-binding proten HflX [Cyanothece sp. PCC 7822] Length = 565 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 24/143 (16%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIV--KEGYKEFI-LAD 212 + + I+G NAGKST L ++T A+ AD F TL P L I+ G E I L D Sbjct: 394 VPSVAIVGYTNAGKSTLLNALTSAEVYTADQLFATLDPTTRRLAILDPDTGTTETILLTD 453 Query: 213 IPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIV----SALEENVQAAYQCILDELS-- 263 G I + D F L+ LLH+V +A E +Q+ IL E+S Sbjct: 454 TVGFIHEL--PPSLVDAFRATLEEVTEADALLHMVDISHAAWESQIQSV-STILSEMSMT 510 Query: 264 ------AYNSELRKKIEIVGLSQ 280 A+N + +IE++ L++ Sbjct: 511 PGPALIAFNKIDQVEIEVLDLAK 533 >gi|156502317|ref|YP_001428382.1| protease, GTP-binding subunit [Francisella tularensis subsp. holarctica FTNF002-00] gi|156252920|gb|ABU61426.1| putative GTPase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 403 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 15/162 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I +G NAGKST +T A D F TL P L ++ E I +D G I Sbjct: 169 IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEIIFSDTVGFI 228 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS-----------AY 265 KN H L+ + +L+H++ +E+ ++ + + LS Y Sbjct: 229 KNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIADKETICVY 288 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF 307 N K+E + S + DSD+ + L+ Q G EF Sbjct: 289 NK--IDKLENIKPSFVPLEDSDSSVVSRVYLSAQNGDGLVEF 328 >gi|89891790|ref|ZP_01203292.1| GTP-binding protein [Flavobacteria bacterium BBFL7] gi|89515945|gb|EAS18610.1| GTP-binding protein [Flavobacteria bacterium BBFL7] Length = 300 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 20/166 (12%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + A V I TT + LGIV + +L+D PGIIK A Sbjct: 12 VNIVGNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGIVNGEDFQIVLSDTPGIIKPA 71 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI---EIVG 277 ++ F+K +A E+ Y L E N K++ E+ Sbjct: 72 YKLQESMMEFVK------------NAFEDADCILYMVELGEKELKNEAFEKRLTYAEVPV 119 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVP----FEFSSITGHGIPQIL 319 + I+ +D ++ + + ++P F S++ G+PQ++ Sbjct: 120 IVLINKIDKGQASQLEEAVEHWKVRLPNAEIFAISALENFGVPQLM 165 >gi|56461130|ref|YP_156411.1| GTP-binding protein EngA [Idiomarina loihiensis L2TR] gi|81821723|sp|Q5QYB3|DER_IDILO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|56180140|gb|AAV82862.1| GTPase EngA [Idiomarina loihiensis L2TR] Length = 479 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 17/169 (10%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G +FI+ D GI Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYDGYQFIVIDTGGI 60 Query: 217 IKNAHQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 + GI + K + + V+L +V A + V Q I D L N KK Sbjct: 61 HGDEE---GIDEEMAKQSLLAVDEADVVLFMVDA-RDGVTVGDQAIADHLRKQN----KK 112 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 + +V ++ID +D+ + L+ G++ + ++ G G+ Q+LE Sbjct: 113 VYLV-CNKIDGIDAHSAMADFYSLS--LGEL-YGIAAAHGRGVEQLLEI 157 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 15/177 (8%) Query: 157 KLIADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 KL + I+G PN GKST + + + + D P TT ++ +E++L D G Sbjct: 189 KLPLKLAIVGRPNVGKSTLINRILGEERVVVYDMPGTTRDSVYIPMQRNEREYVLIDTAG 248 Query: 216 IIKNAHQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 + + G I + L+ E +V+L +V A E I L+A S Sbjct: 249 VRRRGRIGEAIEKFSVVKTLQAIEDANVVLIVVDARETISDQDLNLIGFALNAGRS---- 304 Query: 272 KIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 ++ +++ D + +D K EL + G V F S++ G G+ + E + + Sbjct: 305 --IVIAVNKWDGLQNDHKEEIKRELDRRLGFVDFARLHFISALHGTGVGHLFESVEE 359 >gi|255506962|ref|ZP_05382601.1| GTP binding protein [Chlamydia trachomatis D(s)2923] gi|296435899|gb|ADH18073.1| GTP binding protein [Chlamydia trachomatis G/9768] gi|296437759|gb|ADH19920.1| GTP binding protein [Chlamydia trachomatis G/11074] gi|297140259|gb|ADH97017.1| GTP binding protein [Chlamydia trachomatis G/9301] Length = 447 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 16/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I +IG N+GKST L +T A + + F TL P V + +L D G I Sbjct: 226 IPTFALIGYTNSGKSTLLNLLTSADTYVENKLFATLDPKTRRCVLPCGQRVLLTDTVGFI 285 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 + H L+ + +LLH+V A E+V+ + IL EL ++ Sbjct: 286 RKLPHTLVAAFKSTLEAALQEDILLHVVDASHPLALEHVETT-KAILQELGITQPQV--- 341 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I L+++D V A + ++ P S+ TG GI ++L + D + Sbjct: 342 --ITVLNKMDKVADGVTASRLRLMSPN----PVCVSAKTGEGIRELLRSMEDMV 389 >gi|240168420|ref|ZP_04747079.1| ferrous iron transport protein B [Mycobacterium kansasii ATCC 12478] Length = 637 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 33/57 (57%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 +A + ++G PNAGK+T +T + K +YP T+ ++G K G E + D+PG Sbjct: 17 VARVALVGSPNAGKTTVFNQLTGLRAKTGNYPGVTVGRSVGFAKSGDVEIAVEDLPG 73 >gi|169634287|ref|YP_001708023.1| GTP-binding protein [Acinetobacter baumannii SDF] gi|169153079|emb|CAP02149.1| GTP-binding protein [Acinetobacter baumannii] Length = 444 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 7/126 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST + ++ AD F TL P L ++ +G +LAD G + Sbjct: 199 IPTVSLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLADTVGFV 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELR--K 271 +N H L+ T +LLH++ + ++ A + +L E+ A LR Sbjct: 259 RNLQHDLVESFKATLEETLEATLLLHVIDSSSHDMLDQIKAVEGVLKEIGADAPVLRVYN 318 Query: 272 KIEIVG 277 KI++ G Sbjct: 319 KIDLSG 324 >gi|50086023|ref|YP_047533.1| GTP-binding protein [Acinetobacter sp. ADP1] gi|49531999|emb|CAG69711.1| GTP-binding protein [Acinetobacter sp. ADP1] Length = 444 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 9/127 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST + + AD F TL P L + +G +LAD G + Sbjct: 199 IPTVSLVGYTNAGKSTLFNHLANSDVYAADQLFATLDPTLRRLDWDGIGTVVLADTVGFV 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELR-- 270 +N H L+ T +LLHI+ + + E ++A + +L E+ A LR Sbjct: 259 RNLQHDLIESFKATLEETLEATLLLHIIDSSSPDMLEQIEAV-EGVLKEIGADAPVLRVY 317 Query: 271 KKIEIVG 277 KI++ G Sbjct: 318 NKIDVSG 324 >gi|293365236|ref|ZP_06611953.1| GTP-binding protein Era [Streptococcus oralis ATCC 35037] gi|307703775|ref|ZP_07640716.1| GTP-binding protein Era [Streptococcus oralis ATCC 35037] gi|291316686|gb|EFE57122.1| GTP-binding protein Era [Streptococcus oralis ATCC 35037] gi|307622610|gb|EFO01606.1| GTP-binding protein Era [Streptococcus oralis ATCC 35037] Length = 299 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I+D L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEPRGKGDDMIIDRLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLAQIDDFRNQMDFKEIVP--ISALQGNNVSRLIDILSENL 169 >gi|117928440|ref|YP_872991.1| small GTP-binding protein [Acidothermus cellulolyticus 11B] gi|117648903|gb|ABK53005.1| small GTP-binding protein [Acidothermus cellulolyticus 11B] Length = 458 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 21/166 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKS+ L + + + D TT P IV+ G + + + D G+ + Sbjct: 193 VAIVGRPNVGKSSLLNRLAGEERALVDAVSGTTRDPVDAIVRIGDRRWRVVDTAGLRRRM 252 Query: 221 HQGAGI-------GDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 G D+ ++ E VLL + E Q ++D A Sbjct: 253 RDAVGAEFYAGLRTDQAIRDAEAAVVLLDAAEPITEQDVRIVQKVIDAGRAL-------- 304 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPF----EFSSITGHGI 315 ++ ++ D VD+D E+ T+ G V + S+ TG G+ Sbjct: 305 -VLAFNKWDAVDADRRLALAREIETELGHVGWAPRLNISARTGRGV 349 >gi|219130091|ref|XP_002185207.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217403386|gb|EEC43339.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 415 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 15/176 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYK---EFILADIPGII 217 + ++G NAGKS+ L +T+A F TL P VK GYK E +L D G I Sbjct: 196 LSLVGYTNAGKSSMLNYLTKAGVMAESMLFATLDPTTRKVKLPGYKTHPEVLLTDTVGFI 255 Query: 218 KN--AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + H A L+ + VL+H++ + Q + L+ + + + + Sbjct: 256 QKLPTHLVAAFR-ATLEEVQEADVLIHVIDVSNPTWRKQEQSVRSVLADIEASDKPMVRV 314 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQILECLHDKIFSI 329 L++ID +D + +EL Q F S++ G G+ + + D + S+ Sbjct: 315 --LNKIDLLDP----VEADELRCQAALEDFTVAVSALEGDGMQDFVSVVEDAMSSL 364 >gi|169794678|ref|YP_001712471.1| GTP-binding protein [Acinetobacter baumannii AYE] gi|213157950|ref|YP_002320748.1| GTP-binding proten [Acinetobacter baumannii AB0057] gi|215482267|ref|YP_002324449.1| GTP-binding proten HflX [Acinetobacter baumannii AB307-0294] gi|301345845|ref|ZP_07226586.1| GTP-binding proten HflX [Acinetobacter baumannii AB056] gi|301512161|ref|ZP_07237398.1| GTP-binding proten HflX [Acinetobacter baumannii AB058] gi|301597149|ref|ZP_07242157.1| GTP-binding proten HflX [Acinetobacter baumannii AB059] gi|332851561|ref|ZP_08433538.1| GTP-binding protein HflX [Acinetobacter baumannii 6013150] gi|332867760|ref|ZP_08437832.1| GTP-binding protein HflX [Acinetobacter baumannii 6013113] gi|169147605|emb|CAM85466.1| GTP-binding protein [Acinetobacter baumannii AYE] gi|213057110|gb|ACJ42012.1| GTP-binding proten [Acinetobacter baumannii AB0057] gi|213988685|gb|ACJ58984.1| GTP-binding proten HflX [Acinetobacter baumannii AB307-0294] gi|332729906|gb|EGJ61238.1| GTP-binding protein HflX [Acinetobacter baumannii 6013150] gi|332733766|gb|EGJ64918.1| GTP-binding protein HflX [Acinetobacter baumannii 6013113] Length = 444 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 7/126 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST + ++ AD F TL P L ++ +G +LAD G + Sbjct: 199 IPTVSLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLADTVGFV 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELR--K 271 +N H L+ T +LLH++ + ++ A + +L E+ A LR Sbjct: 259 RNLQHDLVESFKATLEETLEATLLLHVIDSSSHDMLDQIEAVEGVLKEIGADAPVLRVYN 318 Query: 272 KIEIVG 277 KI++ G Sbjct: 319 KIDLSG 324 >gi|24646434|ref|NP_650248.1| CG7488 [Drosophila melanogaster] gi|23175964|gb|AAF54886.2| CG7488 [Drosophila melanogaster] gi|162944746|gb|ABY20442.1| GH26602p [Drosophila melanogaster] Length = 373 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 24/160 (15%) Query: 162 IGIIGLPNAGKSTFLASVT--RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 I +IG+PN GKSTF+ + R P A TT N I G + + D PG++ Sbjct: 62 IAVIGVPNVGKSTFINNTVNHRVCPTSAKV-HTTRQSNTAIYTTGQTQLVFYDTPGLVTQ 120 Query: 220 AHQGAGIGDRFLKHTERTHVLLH--IVSALEENVQA-----AYQCILDELSAYNS----- 267 D+ K R H + H I++ + + A + +LD L AY++ Sbjct: 121 HEIRRHHLDQNFKSAYR-HAIQHADIIAVVHDASNAWTRKELHPTVLDTLKAYSNLPSFL 179 Query: 268 ------ELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 L+ K ++ L I T+ +DTL K E+ + Sbjct: 180 VLNKIDALKSKRLLLDL--IKTLTNDTLTVGKREVQAKSA 217 >gi|320101591|ref|YP_004177182.1| GTP-binding protein HflX [Isosphaera pallida ATCC 43644] gi|319748873|gb|ADV60633.1| GTP-binding protein HflX [Isosphaera pallida ATCC 43644] Length = 468 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 18/175 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST + ++T A AD F TL +G +L+D G I Sbjct: 202 VPTVSLVGYTNAGKSTLMNALTGAGVYTADQLFATLDTRTRQWHFKGGGHVLLSDTVGFI 261 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKI 273 +N H L+ + VLLH+V A + A + +L EL+ L Sbjct: 262 RNLPHSLVASFKATLEEARQADVLLHVVDASSHEAERQIEAVEAVLHELA-----LSDVP 316 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKI 326 ++ L++ D V R ++ LA + P E S+ TG G+ ++ + K+ Sbjct: 317 TLLVLNKCDRV------RDQDSLAILRARHPEVVEISAATGTGLAELEAAVRAKL 365 >gi|311895955|dbj|BAJ28363.1| putative GTP-binding protein Era homolog [Kitasatospora setae KM-6054] Length = 309 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 7/130 (5%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NAHQ 222 +G PNAGKST ++ K I +D P TT + GIV + +L D PG+ K Sbjct: 16 VGRPNAGKSTLTNALVGTKVAITSDRPQTTRHTVRGIVHRPDSQLVLVDTPGLHKPRTLL 75 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 G + D V+ V A ++ + + I EL +E+RK ++ +++ D Sbjct: 76 GERLNDLVRTTWAEVDVIGFCVPA-DQKLGPGDKFIAKEL----AEIRKTPKVAIVTKTD 130 Query: 283 TVDSDTLARK 292 VDS LA + Sbjct: 131 LVDSKRLAEQ 140 >gi|317051559|ref|YP_004112675.1| GTP-binding protein Era [Desulfurispirillum indicum S5] gi|316946643|gb|ADU66119.1| GTP-binding protein Era [Desulfurispirillum indicum S5] Length = 300 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 21/168 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 +GI+G PN GKST + ++ K I+D P TT +G+ + + D PG+ Sbjct: 8 VGIVGRPNVGKSTLMGAIIGEKISIISDKPQTTRNRIMGVWHGDDFQVVFLDTPGV---- 63 Query: 221 HQGA-GIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 H+G GI D L +LL +V E Q + +L EL + + EL + Sbjct: 64 HKGKYGINDFMLNTAFSVLSEVDILLLVVEYWETGGQ-EFNLLLGELRSRHRELPPVFLV 122 Query: 276 VGLSQIDTVDS-----DTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 V ++ID + +++AR+K+ L G +P S++ G + ++ Sbjct: 123 V--NKIDLAEDKHEILESIARQKD-LFDFAGIIP--VSALNGENLDRL 165 >gi|323499818|ref|ZP_08104777.1| GTP-binding protein Der [Vibrio sinaloensis DSM 21326] gi|323315059|gb|EGA68111.1| GTP-binding protein Der [Vibrio sinaloensis DSM 21326] Length = 494 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 38/167 (22%), Positives = 77/167 (46%), Gaps = 13/167 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G K G EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + + L + V+L +V + AA + I L +K Sbjct: 60 IDGTEEGVETKMAQQSLAAIDEADVVLFMVDG-RAGLTAADEAIAQHLRKL-----EKPS 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 ++ ++++D +D+D + + +L + ++ ++ G G+ +++ Sbjct: 114 MLVVNKVDGIDADAASAEFWQLGVENM---YQIAAAHGRGVTALIDL 157 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 209 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRT 268 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK E +V++ ++ A E + L+A S ++ Sbjct: 269 RINETVEKFSVVKTLKAVEDANVVMLVIDARENISDQDLSLLGFALNAGRS------IVI 322 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D+D K EL + G V F S++ G G+ + E + + Sbjct: 323 AVNKWDGLDTDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 374 >gi|319407032|emb|CBI80669.1| GTP-binding protein Era [Bartonella sp. 1-1C] Length = 300 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 19/169 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI---- 216 + +IG+PNAGKST + + K I + TT GIV + IL D PG+ Sbjct: 12 VALIGVPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLVRGIVIYDKTQIILIDTPGVFRPH 71 Query: 217 --IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 ++ A A G K+ + VL+ S L + V A +LD L + + + Sbjct: 72 KRLERAMVSAAWGGA--KNADILLVLIDAQSGLSDEVDA----MLDILKSIEQD-----K 120 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQV-PFEFSSITGHGIPQILECL 322 I+ L++IDTV +L ++ + + F S++ G G +L L Sbjct: 121 ILVLNKIDTVVKSSLLALTAKVNERVNFLQTFMISALNGSGCKDLLHYL 169 >gi|289548228|ref|YP_003473216.1| ribosome-associated GTPase EngA [Thermocrinis albus DSM 14484] gi|289181845|gb|ADC89089.1| ribosome-associated GTPase EngA [Thermocrinis albus DSM 14484] Length = 430 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 11/161 (6%) Query: 164 IIGLPNAGKST-FLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 I+G PN GKST F V R K ++ P T V+ ++FI+AD GI++ + Sbjct: 6 IVGRPNVGKSTLFNRLVGRRKNIVSPIPGVTRDIVEAQVQWKDRKFIVADTGGIMEKGDE 65 Query: 223 -GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQI 281 + D+ LK + V+L +V E + A+ Q I L Y R K+ +V + Sbjct: 66 LTREVRDKVLKAIRKADVILFVVDG-REGITASDQNIAKILYPY----RDKVFLV----V 116 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + +D+ +L + E + + F S+ G G+ +L+ + Sbjct: 117 NKIDNKSLEKNLYEFYSLGFERVFGISAEHGRGVGDLLDAV 157 >gi|225414492|ref|ZP_03761681.1| hypothetical protein CLOSTASPAR_05715 [Clostridium asparagiforme DSM 15981] gi|225041982|gb|EEG52228.1| hypothetical protein CLOSTASPAR_05715 [Clostridium asparagiforme DSM 15981] Length = 697 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 15/147 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 +G +G PN GK+T + T AK K+A++P T+ G + + D+PGI + + Sbjct: 40 VGFVGNPNCGKTTLFNAFTGAKLKVANWPGVTVERVEGETNYKGRPIKVIDLPGIYSLTS 99 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + + ++ E V++++V S+LE N+ Q I EL+K + I+ Sbjct: 100 YTIEEKVTRKCIEDGE-VDVIINVVDASSLERNLYLTMQLI---------ELKKPV-ILA 148 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVP 304 L+ +D V+ + + L G +P Sbjct: 149 LNMMDIVEERGMEIDMHRLPEMLGGIP 175 >gi|21673128|ref|NP_661193.1| GTP-binding protein Era [Chlorobium tepidum TLS] gi|21646203|gb|AAM71535.1| GTP-binding protein, Era/ThdF family [Chlorobium tepidum TLS] Length = 305 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 14/170 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +G PNAGKST L + K I P TT GI + + I+ D PGI+ Sbjct: 11 VTFVGAPNAGKSTLLNRLLDHKLSIVTPKPQTTRKKITGIYHDDRSQIIILDTPGIMDPK 70 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSAL------EENVQAAYQCILDELSAYNSELRKKIE 274 + + L+ T R+ ++ AL +E + + EL + K Sbjct: 71 Q---SLHESMLEITRRSLRESDVIVALIPFQKGDEPIDRKFAS---ELIEQWVKPTGKPF 124 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECLH 323 ++ L++ D V +T + E+ ++ V S++TG IP+++E L Sbjct: 125 VIALNKADLVPEETAKEAQTEIISKYKPVATLALSALTGGNIPELVELLR 174 >gi|70940983|ref|XP_740836.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56518826|emb|CAH74908.1| hypothetical protein PC000405.00.0 [Plasmodium chabaudi chabaudi] Length = 587 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 27/173 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ V+RA ++ Y FTT +G + + D PG++ Sbjct: 77 ILLAGAPNVGKSSFINYVSRANVEVQPYSFTTKNLYVGHFDHNLNRYQIIDTPGLL---- 132 Query: 222 QGAGIGDRFLKH---TERTHV--LLHIVSALEENVQAAYQC---ILDE---LSAYNSELR 270 DR L++ E T + L HI + + + +C I D+ L + S Sbjct: 133 ------DRTLENRNTIEMTTIAALAHINGVILFIIDISEECGMTIKDQINLLYSIKSLFS 186 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQC-----GQVPF-EFSSITGHGIPQ 317 K ++GL++ID D+++ + L Q V F FS++TG G+ + Sbjct: 187 NKSIVIGLNKIDKGSLDSVSVENKLLIKQIVDDIKRTVKFCSFSTLTGVGVEE 239 >gi|56475689|ref|YP_157278.1| putative GTP-binding protein [Aromatoleum aromaticum EbN1] gi|56311732|emb|CAI06377.1| putative GTP-binding protein [Aromatoleum aromaticum EbN1] Length = 467 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 2/90 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGII 217 +A++ ++G NAGKST + ++T ++ +A+ F TL + ++ E +++D G I Sbjct: 240 VANVALVGYTNAGKSTLMRALTGSEVLVANKLFATLDTTVRVIYPESVPRVLVSDTVGFI 299 Query: 218 KNAHQG-AGIGDRFLKHTERTHVLLHIVSA 246 KN G L +LLH++ A Sbjct: 300 KNLPHGLVASFKSTLDEALDASLLLHVIDA 329 >gi|326201608|ref|ZP_08191479.1| ferrous iron transport protein B [Clostridium papyrosolvens DSM 2782] gi|325988208|gb|EGD49033.1| ferrous iron transport protein B [Clostridium papyrosolvens DSM 2782] Length = 804 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 14/157 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K+ + + I+ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLKK-HNDVIIMDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ER +L+I+ + LE N+ Q +EL + +V + Sbjct: 64 YTLEEVVARNYLIKERPDAILNIIDGTNLERNLYLTTQL---------TELGIPV-VVAI 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 + +D ++ + EL+ Q G E S++ G GI Sbjct: 114 NMMDVINKNGDKINVGELSRQLGCKVVEISALKGTGI 150 >gi|255028008|ref|ZP_05299994.1| GTPase ObgE [Listeria monocytogenes FSL J2-003] Length = 45 Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 14/27 (51%), Positives = 24/27 (88%) Query: 3 FLDEAKVYIRSGDGGAGGISFRREKFI 29 F+D+ K+Y+++G+GG G ++FRREKF+ Sbjct: 2 FVDQVKIYVKAGNGGDGMVAFRREKFV 28 >gi|329850745|ref|ZP_08265590.1| GTP-binding protein Era [Asticcacaulis biprosthecum C19] gi|328841060|gb|EGF90631.1| GTP-binding protein Era [Asticcacaulis biprosthecum C19] Length = 317 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIK 218 + IIG PNAGKST + + K I TT +P GI + + IL D PGI K Sbjct: 11 VAIIGAPNAGKSTLVNQLVGTKVSIVTQKVQTTRFPVRGIALDEEVQMILVDTPGIFK 68 >gi|303244784|ref|ZP_07331113.1| ferrous iron transport protein B [Methanothermococcus okinawensis IH1] gi|302484825|gb|EFL47760.1| ferrous iron transport protein B [Methanothermococcus okinawensis IH1] Length = 654 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 33/55 (60%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + + G PN GK+T S+T + +I ++P T+ G++K KEF + D+PGI Sbjct: 11 VALTGQPNVGKTTLFNSLTGMRQEIGNWPGVTVEKKEGLLKYNNKEFKVVDLPGI 65 >gi|253999400|ref|YP_003051463.1| GTP-binding proten HflX [Methylovorus sp. SIP3-4] gi|253986079|gb|ACT50936.1| GTP-binding proten HflX [Methylovorus sp. SIP3-4] Length = 379 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 32/184 (17%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL--------YPNLGIVKEGYK 206 K L+ + ++G NAGKST +T++ AD F TL P+ G V Sbjct: 194 KRSLVMSVSLVGYTNAGKSTLFNRLTQSGVYAADQLFATLDTTSRKLYIPDGGPV----- 248 Query: 207 EFILADIPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVSA---LEENVQAAYQCILD 260 +L+D G IK H + + F L+ + +LLH+V A + ++ A +L+ Sbjct: 249 --VLSDTVGFIK--HLPHALVEAFGATLEEAVQADLLLHVVDAASPVRDDQIAQVNKVLE 304 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 E+ A + +++ L+QID + +++E C S+ TG G+ + + Sbjct: 305 EIGAEHVH-----QVLVLNQIDRAGLEP-GLERDEYGRICR---IRISAKTGEGLELVRQ 355 Query: 321 CLHD 324 CL + Sbjct: 356 CLRE 359 >gi|291613888|ref|YP_003524045.1| GTP-binding proten HflX [Sideroxydans lithotrophicus ES-1] gi|291584000|gb|ADE11658.1| GTP-binding proten HflX [Sideroxydans lithotrophicus ES-1] Length = 380 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 4/90 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEG--YKEFILADIPG 215 + + I+G NAGKST +T A +A+ F TL I EG +++ +L+D G Sbjct: 197 VMSVSIVGYTNAGKSTLFNRLTNANVYVANQLFATLDTTARKIFLEGDSHRQVVLSDTVG 256 Query: 216 IIKNAHQGAGIGDR-FLKHTERTHVLLHIV 244 I++ G R L+ T + +LLH+V Sbjct: 257 FIRHLPHGLVAAFRSTLEETAQADLLLHVV 286 >gi|305681495|ref|ZP_07404302.1| GTP-binding protein Era [Corynebacterium matruchotii ATCC 14266] gi|305659700|gb|EFM49200.1| GTP-binding protein Era [Corynebacterium matruchotii ATCC 14266] Length = 305 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 12/154 (7%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PN GKST ++ K I A+ P TT +P GIV + I+ D PG+ + Sbjct: 18 VGRPNTGKSTLTNALVGQKIAITANQPETTRHPIRGIVHRDDAQIIVVDTPGLHRPRTLL 77 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG-LSQID 282 + +K T L+ I +E + + ILD + ++ K ++G +++ID Sbjct: 78 GERLNEVVKDTYADMDLIAITIPADEKIGPGDRWILDNV----RKVAPKTPLMGIITKID 133 Query: 283 TVDSDTLARKKNELATQCGQ----VPFEFSSITG 312 V D +A + L G+ VP S++TG Sbjct: 134 KVSRDQVALQLMALHKLLGEDSEVVP--VSAVTG 165 >gi|328869018|gb|EGG17396.1| GTP-binding protein engA [Dictyostelium fasciculatum] Length = 770 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYP-NLGIVKEGYKEFILADIPGIIKN 219 I I+G PNAGKS+ L + + I +D P TT P + +V + L D GI + Sbjct: 308 ISIVGQPNAGKSSLLNRIIEQERSIVSDVPGTTHDPVDCHLVWRDKHDLTLIDTAGIRRR 367 Query: 220 AHQGAGIGDR----FLKHTERTHVLLHIVSA 246 A G+ +K ER+HV+L ++ + Sbjct: 368 ATHRVGLEKSSVLWAMKAIERSHVVLFVIDS 398 >gi|296115042|ref|ZP_06833684.1| GTP-binding protein Era [Gluconacetobacter hansenii ATCC 23769] gi|295978379|gb|EFG85115.1| GTP-binding protein Era [Gluconacetobacter hansenii ATCC 23769] Length = 302 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 17/166 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PNAGKST L + K I TT + LGI+ + + +L D PGI + Sbjct: 14 VAIVGAPNAGKSTLLNRMAGTKLSIVSPKAQTTRFRVLGILMRNHAQMLLVDTPGIFRPR 73 Query: 221 HQGAGIGDRFLKH-----TERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + DR + E + L I+ A + A + I+ +L+ N +++ + Sbjct: 74 R----MLDRAMVAAAWTGAEDADITLLIIDA-RAGLTEAVREIVSQLAQRN----RRVWL 124 Query: 276 VGLSQIDTVDSDTLARKKNELA-TQCGQVPFEFSSITGHGIPQILE 320 V L++ D + D L EL+ + F S+ +G G+ +++ Sbjct: 125 V-LNKTDLMRRDALLPLTAELSGLLTVEHVFMISARSGQGVDDLMD 169 >gi|229543819|ref|ZP_04432878.1| GTP-binding protein Era [Bacillus coagulans 36D1] gi|229324958|gb|EEN90634.1| GTP-binding protein Era [Bacillus coagulans 36D1] Length = 302 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 8/93 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I IIG PN GKSTF+ V K I +D P TT G+ + I D PGI K Sbjct: 11 ISIIGRPNVGKSTFINQVVGQKIAIMSDKPQTTRNKIQGVYTADDAQMIFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEE 249 H+ +GD +K T ++L +V+A E+ Sbjct: 71 HK---LGDFMVKSATDTLKEVDLILFMVNAEEK 100 >gi|182625195|ref|ZP_02952971.1| dihydrofolate reductase [Clostridium perfringens D str. JGS1721] gi|177909654|gb|EDT72088.1| dihydrofolate reductase [Clostridium perfringens D str. JGS1721] Length = 669 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 16/174 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK++ +T+++ I ++P T+ G +K + + + D+PG A Sbjct: 4 IALAGNPNCGKTSLFNLLTKSRQHIGNWPGVTVEKKEGTLKFKGESYKVIDLPGTYSLGA 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + I R ++ V++++V A LE N+ Q I E+ + ++ L Sbjct: 64 YSEDEIVARNYILKDKPDVVINVVDATNLERNLYLTTQLI---------EMGANV-VIAL 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + ID ++ + N+L+ + G + S++ GI +++E I+S + E Sbjct: 114 NMIDQAEALNIEIDTNKLSKRLGVPIIKTSALKNRGIEELIET---SIYSKKNE 164 >gi|15218487|ref|NP_172501.1| GTP-binding protein-related [Arabidopsis thaliana] gi|332190442|gb|AEE28563.1| Nucleolar GTP-binding protein [Arabidopsis thaliana] Length = 687 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 5/84 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+F+ VTRA + Y FTT LG + + D PG++ Sbjct: 202 ICGCPNVGKSSFMNKVTRADVAVQPYAFTTKSLFLGHTDYKCLRYQVIDTPGLLDRE--- 258 Query: 224 AGIGDRFLKHTERTHVLLHIVSAL 247 I DR + L HI +A+ Sbjct: 259 --IEDRNIIELCSITALAHIRAAV 280 >gi|186680759|ref|YP_001863955.1| GTP-binding protein, HSR1-related [Nostoc punctiforme PCC 73102] gi|186463211|gb|ACC79012.1| GTP-binding protein, HSR1-related [Nostoc punctiforme PCC 73102] Length = 562 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 21/150 (14%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------KEGYKEFILAD 212 I + ++G NAGKST L +T A+ AD F TL P V + + +L D Sbjct: 381 IPVLALVGYTNAGKSTLLNVLTNAEVFTADQLFATLDPTTRKVVITEPETQERRSILLTD 440 Query: 213 IPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVS----ALEENVQAAYQCILDELSAY 265 G I + D F L+ ++H+V A E ++ + + IL+E+ Sbjct: 441 TVGFIHEL--PPPLMDAFRATLEEVVEADAMIHVVDLSHPAWESHITSVLE-ILEEM--- 494 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 E+ +K ++ +++D VDS+TL R + + Sbjct: 495 -PEIPEK-SLIAFNKVDKVDSETLDRVQQD 522 >gi|225870931|ref|YP_002746878.1| GTP-binding protein Era homolog [Streptococcus equi subsp. equi 4047] gi|254783664|sp|C0MBF0|ERA_STRE4 RecName: Full=GTPase Era gi|225700335|emb|CAW94640.1| GTP-binding protein Era homolog [Streptococcus equi subsp. equi 4047] Length = 298 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K + +D TT +GI ++ + D PGI K Sbjct: 7 VAILGRPNVGKSTFLNHVMGQKIAVMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHKPK 66 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 67 ---TALGDFMVESAYSTLREVETVLFMVPA-DEKRGKGDDMIIERLKAARIPV-----IL 117 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ + +++ L D + Sbjct: 118 VINKIDKVHPDQLLEQIDDFRSQMDFKEIVP--ISALQGNNVETLVQLLKDNL 168 >gi|254369245|ref|ZP_04985257.1| protease [Francisella tularensis subsp. holarctica FSC022] gi|157122195|gb|EDO66335.1| protease [Francisella tularensis subsp. holarctica FSC022] Length = 435 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 15/162 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I +G NAGKST +T A D F TL P L ++ E I +D G I Sbjct: 201 IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEIIFSDTVGFI 260 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS-----------AY 265 KN H L+ + +L+H++ +E+ ++ + + LS Y Sbjct: 261 KNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIADKETICVY 320 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF 307 N K+E + S + DSD+ + L+ Q G EF Sbjct: 321 NK--IDKLENIKPSFVPLEDSDSSVVSRVYLSAQNGDGLVEF 360 >gi|312083723|ref|XP_003143981.1| nucleolar GTP-binding protein 1 [Loa loa] gi|307760854|gb|EFO20088.1| nucleolar GTP-binding protein 1 [Loa loa] Length = 959 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 84/204 (41%), Gaps = 48/204 (23%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF------------ILA 211 + G PN GKS+ + +TRA ++ Y FTT +G + Y + + Sbjct: 174 LCGFPNVGKSSLMNLLTRADVEVQPYAFTTKALYVGHLDYKYLRWQASAGGDGFPGRFVI 233 Query: 212 DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD----------E 261 D PGI+ + ER + + V+AL +++AA I+D E Sbjct: 234 DTPGILDQPLE------------ERNTIEMQAVTAL-AHLRAAVLFIMDISETCDHAIEE 280 Query: 262 LSAYNSELR----KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP------FEFSSIT 311 A +R K ++GL+++D V D L K E Q ++ FE S++T Sbjct: 281 QVALFESIRPLFINKPVLIGLNKVDIVRRDEL---KLEKIKQLKRLEDDSLSLFELSTVT 337 Query: 312 GHGIPQILECLHDKIFSIRGENEF 335 GI + D + + R E++ Sbjct: 338 QEGIMDLRNTACDCLLTQRVESKL 361 >gi|295099666|emb|CBK88755.1| GTP-binding protein Era [Eubacterium cylindroides T2-87] Length = 300 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I+G PNAGKST + ++ + K I +D P TT GI+ +++ D PGI K Sbjct: 8 IAIVGRPNAGKSTLMNALLKEKVAIMSDKPNTTRNNIAGILTLEDAQYVFVDTPGIHKPR 67 Query: 221 HQ 222 Q Sbjct: 68 QQ 69 >gi|237747715|ref|ZP_04578195.1| HflX GTP-binding protein [Oxalobacter formigenes OXCC13] gi|229379077|gb|EEO29168.1| HflX GTP-binding protein [Oxalobacter formigenes OXCC13] Length = 379 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 10/126 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST ++T+A +AD F TL + I E +++D G ++ Sbjct: 193 VSLVGYTNAGKSTLFNAMTKAGTYVADQLFATLDTTSRRIYIEETGNVVISDTVGFVREL 252 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSE---LRKK 272 HQ L+ T +LLH+V A +E ++ +L E+ A N + K Sbjct: 253 PHQLVAAFRATLEETIHADLLLHVVDAANPMRKEQIEQV-NLVLKEIGAENVPQLLVWNK 311 Query: 273 IEIVGL 278 I++ GL Sbjct: 312 IDLAGL 317 >gi|170749854|ref|YP_001756114.1| GTP-binding protein Era [Methylobacterium radiotolerans JCM 2831] gi|170656376|gb|ACB25431.1| GTP-binding protein Era [Methylobacterium radiotolerans JCM 2831] Length = 332 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 21/174 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG+PNAGKST L ++ K I TT GI+ EG + +L D PGI Sbjct: 42 VALIGVPNAGKSTLLNNLVGTKVSIVSRKVQTTRALVRGILIEGSAQVVLVDTPGIFAPK 101 Query: 221 HQGAGIGDRFLKHTERT-----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + DR + H+ + + +V A + V A + +L L E ++ Sbjct: 102 RR----LDRAMVHSAWSGAADADAVCLLVDA-RKGVDAEVEAVLGRLGEVKRE-----KL 151 Query: 276 VGLSQIDTVDSDT---LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + L++ID + + LA K N A F S++ G G+ + L ++ Sbjct: 152 LILNKIDLIPRERLLDLAAKLNAAAPFAET--FMISALNGDGVADLRRALAARM 203 >gi|154299972|ref|XP_001550403.1| hypothetical protein BC1G_11175 [Botryotinia fuckeliana B05.10] gi|150856788|gb|EDN31980.1| hypothetical protein BC1G_11175 [Botryotinia fuckeliana B05.10] Length = 530 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 25/173 (14%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTR-------AKPKIADYPFTTLYPNLGIVKEGYKE 207 +LK +G+IG PN GKS+ + ++T A P A+ TT +L VK K Sbjct: 298 QLKRSVSVGVIGYPNVGKSSVINALTSRLGGAGAACPVGAEAGVTT---SLRSVKIDSK- 353 Query: 208 FILADIPGIIKNAHQGAGIGDRFLKHTERTH-VLLHIVSALE-ENVQAAYQCILDELSAY 265 L D PGI+ AG + K E+ VLL+ + + E+ A +L LSA Sbjct: 354 LTLLDSPGIV---FPTAGDNSKASKIEEQARLVLLNAIPPKQIEDPVPAVALLLKRLSAS 410 Query: 266 NSELRKKIEIVGLSQIDTVDSDT-------LARKKNELATQCGQVPFEFSSIT 311 L K +++ GL + +V+ D+ +ARK+ L G VP S+ T Sbjct: 411 QDMLNKLMDVYGLPPLVSVNGDSTSDFLIQVARKRGRLGK--GGVPNISSAAT 461 >gi|91228437|ref|ZP_01262362.1| ferrous iron transport protein B [Vibrio alginolyticus 12G01] gi|91188021|gb|EAS74328.1| ferrous iron transport protein B [Vibrio alginolyticus 12G01] Length = 758 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 17/169 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G K EF+L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGQFKHAGDEFLLTDLPGIYSLDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH +++++V A LE ++ Q L EL + IV Sbjct: 68 SNSIDESIASRAVLTHPADLIINVVDATSLERSLYMTLQ--LRELG--------RPMIVV 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L+++D + + EL G S+ + + E LH I Sbjct: 118 LNKMDALKRERQMINVAELEKTLGCPVVSLSATNKTQVAEFREKLHKSI 166 >gi|6325164|ref|NP_015232.1| Nog1p [Saccharomyces cerevisiae S288c] gi|17368412|sp|Q02892|NOG1_YEAST RecName: Full=Nucleolar GTP-binding protein 1 gi|1151233|gb|AAB68206.1| Ypl093wp [Saccharomyces cerevisiae] gi|151942704|gb|EDN61050.1| nucleolar g-protein [Saccharomyces cerevisiae YJM789] gi|190407863|gb|EDV11128.1| nucleolar GTP-binding protein 1 [Saccharomyces cerevisiae RM11-1a] gi|256274195|gb|EEU09103.1| Nog1p [Saccharomyces cerevisiae JAY291] gi|259150065|emb|CAY86868.1| Nog1p [Saccharomyces cerevisiae EC1118] gi|285815448|tpg|DAA11340.1| TPA: Nog1p [Saccharomyces cerevisiae S288c] gi|323331218|gb|EGA72636.1| Nog1p [Saccharomyces cerevisiae AWRI796] gi|323335047|gb|EGA76337.1| Nog1p [Saccharomyces cerevisiae Vin13] gi|323346195|gb|EGA80485.1| Nog1p [Saccharomyces cerevisiae Lalvin QA23] gi|323352020|gb|EGA84559.1| Nog1p [Saccharomyces cerevisiae VL3] Length = 647 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 28/54 (51%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL +T++ + Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLRCITKSDVDVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGIL 225 >gi|116670027|ref|YP_830960.1| small GTP-binding protein [Arthrobacter sp. FB24] gi|116610136|gb|ABK02860.1| small GTP-binding protein [Arthrobacter sp. FB24] Length = 522 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 21/176 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE----GYKEFILADIP 214 + + I G NAGKS+ L +T A + + F TL P + + GY LAD Sbjct: 300 VPSVAIAGYTNAGKSSLLNRLTDAGVLVENALFATLDPTVRKAETADGLGY---TLADTV 356 Query: 215 GIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELR 270 G +++ Q L+ + ++LH+V + + AA + + E+ A R Sbjct: 357 GFVRSLPTQLVEAFRSTLEEVADSDLILHVVDVSHPDPEGQIAAVRAVFSEVDA-----R 411 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 K EI+ L++ D D + R K S+ TG GI ++L+ + + I Sbjct: 412 KVPEIIVLNKADAADPFVVERLKQREPRHVV-----VSARTGQGIAELLKAISESI 462 >gi|115524769|ref|YP_781680.1| GTP-binding protein, HSR1-related [Rhodopseudomonas palustris BisA53] gi|115518716|gb|ABJ06700.1| GTP-binding protein, HSR1-related protein [Rhodopseudomonas palustris BisA53] Length = 455 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 8/175 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST +TRA+ + AD F TL P L +V + +L+D G I N Sbjct: 224 VALVGYTNAGKSTLFNRLTRAEVQAADMLFATLDPTLRALVLPHGGKAMLSDTVGFISNL 283 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEE---NVQAAYQCILDELSAYNSELRKKIEIV 276 Q L+ ++LH+ E Q +L +L IE+ Sbjct: 284 PTQLVAAFRATLEEVLEADLILHVRDISHEDADAQQDDVDAVLRQLGIAPGTGSPIIEV- 342 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILECLHDKIFSIR 330 ++ID + +N A + + P S++TG G+ +L+ + D++ R Sbjct: 343 -WNKIDRFSPEQQEELQNIAARRDSEHPCHLVSAVTGQGLDALLQAIEDRLAETR 396 >gi|13476443|ref|NP_108013.1| GTP-binding protein Era [Mesorhizobium loti MAFF303099] gi|21263601|sp|Q985A5|ERA_RHILO RecName: Full=GTPase Era gi|14027204|dbj|BAB54158.1| GTP-binding protein; Era [Mesorhizobium loti MAFF303099] Length = 310 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 15/167 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST + + AK I + TT GI + + D PGI K Sbjct: 21 VALIGAPNAGKSTLVNQLVGAKVSIVTHKVQTTRAIVRGIATHDNAQIVFVDTPGIFKPK 80 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + + + ++L ++ A E ++ IL+ L ++R+ + ++ L+ Sbjct: 81 RRLDTAMVTTAWGGAKDADIVLLLIDA-ERGIRGDADAILERL----KDVRQPMALI-LN 134 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECL 322 ++D V +TL A +VPF+ S++TG G +L+ L Sbjct: 135 KVDRVKHETLLALS---AAANEKVPFKRTFMVSALTGSGCKDLLDYL 178 >gi|323302743|gb|EGA56549.1| Nog1p [Saccharomyces cerevisiae FostersB] Length = 496 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 28/54 (51%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL +T++ + Y FTT +G Y F D PGI+ Sbjct: 91 ICGYPNVGKSSFLRCITKSDVDVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGIL 144 >gi|168206245|ref|ZP_02632250.1| ferrous iron transport protein B [Clostridium perfringens E str. JGS1987] gi|170662274|gb|EDT14957.1| ferrous iron transport protein B [Clostridium perfringens E str. JGS1987] Length = 669 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 16/174 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK++ +T+++ I ++P T+ G +K + + + D+PG A Sbjct: 4 IALAGNPNCGKTSLFNLLTKSRQHIGNWPGVTVEKKEGTLKFKGESYKVIDLPGTYSLGA 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + I R ++ V++++V A LE N+ Q I E+ + ++ L Sbjct: 64 YSEDEIVARNYILKDKPDVVINVVDATNLERNLYLTTQLI---------EMGANV-VIAL 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + ID ++ + N+L+ + G + S++ GI +++E I+S + E Sbjct: 114 NMIDQAEALNIEIDTNKLSKRLGVPIIKTSALKNRGIEELIET---SIYSKKNE 164 >gi|120403426|ref|YP_953255.1| GTP-binding protein, HSR1-related [Mycobacterium vanbaalenii PYR-1] gi|119956244|gb|ABM13249.1| GTP-binding protein HflX [Mycobacterium vanbaalenii PYR-1] Length = 482 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 12/146 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 I I I+G NAGKS+ L ++T A + + F TL P G +G + F+L D G Sbjct: 258 IPSIAIVGYTNAGKSSLLNALTGAGVLVENALFATLEPTTRRGQFDDG-RPFVLTDTVGF 316 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELR 270 ++ H + + F L+ +L+H+V + N A A + +++E++A ++ Sbjct: 317 VR--HLPTQLVEAFRSTLEEVVDAELLVHVVDGSDVNPLAQINAVRQVINEVAA-EYDIA 373 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNEL 296 E++ +++ D D TLA+ + L Sbjct: 374 PPPELLVVNKTDAADGVTLAQLRRAL 399 >gi|34557761|ref|NP_907576.1| putative ferrous iron transport protein B [Wolinella succinogenes DSM 1740] gi|34483478|emb|CAE10476.1| PUTATIVE FERROUS IRON TRANSPORT PROTEIN B [Wolinella succinogenes] Length = 759 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 3/87 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I ++G PN GKST +++ AK IA+YP T+ + G +E L D+PGI + Sbjct: 9 IALLGQPNCGKSTLFNTLSGAKQHIANYPGVTVDKKSAYFRLGDQEVELIDLPGIYSLST 68 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 + +L+ E+ ++L+I+ A Sbjct: 69 FSPEERVSLAYLRE-EKPDLILNIIDA 94 >gi|229135658|ref|ZP_04264435.1| Ferrous iron transport protein B [Bacillus cereus BDRD-ST196] gi|228647756|gb|EEL03814.1| Ferrous iron transport protein B [Bacillus cereus BDRD-ST196] Length = 657 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 17/166 (10%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAH 221 ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 1 MLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--KQGTLIDLPGVYDLNPVS 58 Query: 222 QGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + G+ FL T+ H +L+IV S E N+ Q + E K + I GL+ Sbjct: 59 RDEGVVTNFLL-TDEFHHMLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-GLN 107 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDK 325 ID + L+ G + TG G ++L LH++ Sbjct: 108 MIDVAKQRGIVINVKRLSEILGVTVVPVIARTGKGCEELLTTLHEE 153 >gi|110800234|ref|YP_695571.1| ferrous iron transport protein B [Clostridium perfringens ATCC 13124] gi|168209475|ref|ZP_02635100.1| ferrous iron transport protein B [Clostridium perfringens B str. ATCC 3626] gi|110674881|gb|ABG83868.1| ferrous iron transport protein B [Clostridium perfringens ATCC 13124] gi|170712382|gb|EDT24564.1| ferrous iron transport protein B [Clostridium perfringens B str. ATCC 3626] Length = 669 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 16/174 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK++ +T+++ I ++P T+ G +K + + + D+PG A Sbjct: 4 IALAGNPNCGKTSLFNLLTKSRQHIGNWPGVTVEKKEGTLKFKGESYKVIDLPGTYSLGA 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + I R ++ V++++V A LE N+ Q I E+ + ++ L Sbjct: 64 YSEDEIVARNYILKDKPDVVINVVDATNLERNLYLTTQLI---------EMGANV-VIAL 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + ID ++ + N+L+ + G + S++ GI +++E I+S + E Sbjct: 114 NMIDQAEALNIEIDTNKLSKRLGVPIIKTSALKNRGIEELIET---SIYSKKNE 164 >gi|289209107|ref|YP_003461173.1| GTP-binding protein Era [Thioalkalivibrio sp. K90mix] gi|288944738|gb|ADC72437.1| GTP-binding protein Era [Thioalkalivibrio sp. K90mix] Length = 303 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 28/144 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GK+T + + K P TT LGIV EG + +L D PGI Sbjct: 14 VALVGRPNVGKTTLMNRLVGEKLAATTRRPHTTRNRILGIVTEGDDQIVLMDTPGI---- 69 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYN------SELRKK 272 TERT ++ ++ +A + A C L E + +L ++ Sbjct: 70 ------------DTERTRLVNRVLNRTASQALADADLVCFLVEAGRFGEGDERIEQLIRQ 117 Query: 273 IEIVGLSQIDTVDSDTLARKKNEL 296 E L I+ VD AR+K EL Sbjct: 118 SERPALLVINKVDR---AREKEEL 138 >gi|148675551|gb|EDL07498.1| guanine nucleotide binding protein-like 3 (nucleolar)-like [Mus musculus] Length = 598 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 14/107 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGY-KEFI-LADIPGIIK 218 +G++GLPN GKS+ + S+ R++ + P T + ++E Y +FI L D PGI+ Sbjct: 270 VGVVGLPNVGKSSLINSLKRSRACSVGAVPGVTKF-----MQEVYLDKFIRLLDAPGIVP 324 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + G R H ++ L V+ +E +Q +C L+E+S+Y Sbjct: 325 GPNSEVGTILRNCIHVQK---LADPVTPVETILQ---RCNLEEISSY 365 >gi|153006942|ref|YP_001381267.1| ferrous iron transport protein B [Anaeromyxobacter sp. Fw109-5] gi|152030515|gb|ABS28283.1| ferrous iron transport protein B [Anaeromyxobacter sp. Fw109-5] Length = 738 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 14/155 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + + G PN+GKST + ++ ++ + ++P T+ ++ G + L D+PG + Sbjct: 23 VAVAGNPNSGKSTLINAIAGSRLHVGNWPGVTVEKKEASLEHGGRRIRLVDLPGTYSLSP 82 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQC------ILDELSAYNSELRK 271 Q + +L H ER V++++V A LE N+ Q ++ L+ Y+ K Sbjct: 83 YSQEEIVARDYLAH-ERPDVIVNVVDATNLERNLYLTVQLLELGIPVVMALNIYDEAEAK 141 Query: 272 --KIEIVGL-SQIDTVDSDTLARKKNELATQCGQV 303 +I++ GL +++ T A KK LA G V Sbjct: 142 GYRIDVRGLEARLGLRVVPTSATKKTGLAELLGTV 176 >gi|78045135|ref|YP_359291.1| GTP-binding protein Era [Carboxydothermus hydrogenoformans Z-2901] gi|123576937|sp|Q3AEZ3|ERA_CARHZ RecName: Full=GTPase Era gi|77997250|gb|ABB16149.1| GTP-binding protein Era [Carboxydothermus hydrogenoformans Z-2901] Length = 298 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 13/168 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L V K I +D P TT ++ + I D PG+ K Sbjct: 8 VSIVGRPNVGKSTLLNQVVGTKIAIMSDKPQTTRNKIRAVLTSEKGQIIFIDTPGVQKPR 67 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 ++ G + + L + VLL++V A + +L L+ + + I+ ++ Sbjct: 68 NKLGEFMLKQALTSLDEVDVLLYVVEA-NSPIGPQENYLLKTLAEVKTPI-----ILVVN 121 Query: 280 QIDTV---DSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 +ID V ++ TLAR+ E + + + S++ G G+ +++E + + Sbjct: 122 KIDVVKMIEAQTLARQI-ESRLKVAKT-YYISALNGTGVSELVEGIFE 167 >gi|33597405|ref|NP_885048.1| putative GTP-binding protein [Bordetella parapertussis 12822] gi|33602145|ref|NP_889705.1| putative GTP-binding protein [Bordetella bronchiseptica RB50] gi|33573832|emb|CAE38140.1| putative GTP-binding protein [Bordetella parapertussis] gi|33576583|emb|CAE33661.1| putative GTP-binding protein [Bordetella bronchiseptica RB50] Length = 345 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST ++TRA AD F TL I +G +L+D G I++ Sbjct: 169 VSLVGYTNAGKSTLFNAMTRAGAYAADQLFATLDTTTRRIWIDGAGSVVLSDTVGFIRDL 228 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 H L+ T +LLH+V A Sbjct: 229 PHNLIAAFRATLEETVHADLLLHVVDA 255 >gi|17545940|ref|NP_519342.1| hypothetical protein RSc1221 [Ralstonia solanacearum GMI1000] gi|17428235|emb|CAD14923.1| putative gtpase protein [Ralstonia solanacearum GMI1000] Length = 417 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST ++T+A+ A+ F TL + + EG +L+D G I++ Sbjct: 204 VSLVGYTNAGKSTLFNALTKARAYAANQLFATLDTTSRRLYLEGLGNVVLSDTVGFIRDL 263 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 Q L+ T VLLH+V A Sbjct: 264 PTQLVAAFRATLEETVHADVLLHVVDA 290 >gi|71005466|ref|XP_757399.1| hypothetical protein UM01252.1 [Ustilago maydis 521] gi|46096386|gb|EAK81619.1| hypothetical protein UM01252.1 [Ustilago maydis 521] Length = 703 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 30/54 (55%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+F+ VTR+ + Y FTT +G + Y + + D PGI+ Sbjct: 172 ICGYPNVGKSSFINKVTRSDVDVKPYAFTTKSLFVGHMDYKYLRWQVIDTPGIL 225 >gi|332184229|gb|AEE26483.1| GTP-binding protein Era [Francisella cf. novicida 3523] Length = 297 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I IIG PN GKST L ++ + K I P TT + GI G +FI D PGI Sbjct: 7 ISIIGRPNVGKSTLLNNILKYKVSITSRKPQTTRHQITGIKTVGDTQFIYVDTPGI 62 >gi|329766983|ref|ZP_08258511.1| GTP-binding protein Era [Gemella haemolysans M341] gi|328837708|gb|EGF87333.1| GTP-binding protein Era [Gemella haemolysans M341] Length = 302 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 32/157 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PNAGKST L ++ + K I +D P TT G+ + + + D PGI K Sbjct: 11 VTIIGRPNAGKSTLLNNILQQKIAIMSDKPQTTRNIINGVYTDNDSQIVFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLK-------HTERTHVLL-----------HIVSALEENVQAAYQCI---- 258 H+ +GD +K +E ++++ H+++ ++E + I Sbjct: 71 HR---LGDYMMKLASSAIQESEIVYLIINASEKFGPGDQHLINIVKELKVPTFLLINKID 127 Query: 259 ------LDELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 L ++ + +L +EIV +S + +++ D L Sbjct: 128 LISPEQLIQIIEFYKDLYDFVEIVPISALKSINVDNL 164 >gi|302831580|ref|XP_002947355.1| hypothetical protein VOLCADRAFT_57006 [Volvox carteri f. nagariensis] gi|300267219|gb|EFJ51403.1| hypothetical protein VOLCADRAFT_57006 [Volvox carteri f. nagariensis] Length = 680 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+ + +TRA ++ Y FTT +G + Y + + D PGI+ Sbjct: 173 LCGYPNVGKSSMMNKLTRADVEVQPYAFTTKSLYVGHMDYKYLRWQVIDTPGILDRP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + +R + L H+ +A+ V + QC Sbjct: 230 --LEERNTIEMQSITALAHLRAAVLYLVDISEQC 261 >gi|289550662|ref|YP_003471566.1| GTP-binding protein Era [Staphylococcus lugdunensis HKU09-01] gi|315658157|ref|ZP_07911029.1| GTP-binding protein Era [Staphylococcus lugdunensis M23590] gi|289180194|gb|ADC87439.1| GTP-binding protein Era [Staphylococcus lugdunensis HKU09-01] gi|315496486|gb|EFU84809.1| GTP-binding protein Era [Staphylococcus lugdunensis M23590] Length = 299 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 6/129 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G++ + I D PGI K Sbjct: 9 VSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H+ R K+T + + + E++ + I+D L + + + L++ Sbjct: 69 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMDMLRNVKTPV-----FLVLNK 123 Query: 281 IDTVDSDTL 289 ID V D+L Sbjct: 124 IDLVHPDSL 132 >gi|206901706|ref|YP_002250356.1| GTP-binding protein [Dictyoglomus thermophilum H-6-12] gi|206740809|gb|ACI19867.1| GTP-binding protein [Dictyoglomus thermophilum H-6-12] Length = 328 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 32/55 (58%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + ++G PN GKS F +T +A+YPFTT+ P +G++ + L D+P + Sbjct: 83 VLLVGPPNTGKSKFFTLLTGVNSLVAEYPFTTMDPIVGMLPYENIQIQLIDLPPL 137 >gi|145517200|ref|XP_001444483.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|74831293|emb|CAI39278.1| Nucleolar G-protein, putative [Paramecium tetraurelia] gi|124411905|emb|CAK77086.1| unnamed protein product [Paramecium tetraurelia] Length = 648 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 32/57 (56%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + G PN GKS+F+ ++T A + YPFTT +G + + + D PG++ ++ Sbjct: 172 VTGFPNVGKSSFVNNITNANLDVQPYPFTTQNLYVGHSDYNFVRWQVIDTPGVLDHS 228 >gi|297527512|ref|YP_003669536.1| GTP-binding proten HflX [Staphylothermus hellenicus DSM 12710] gi|297256428|gb|ADI32637.1| GTP-binding proten HflX [Staphylothermus hellenicus DSM 12710] Length = 368 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 24/177 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP-NLGIVKEGYKEFILADIPGIIKN- 219 I IIG AGK+T +T I PFTTL P + +V +G K IL D G I++ Sbjct: 181 ISIIGYTCAGKTTLFNRLTHNLKPIGPEPFTTLSPKSSALVIDGLK-MILTDTVGFIRDL 239 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE----- 274 H+ L+ +++++H++ A + + I+ E+ E R+ E Sbjct: 240 PHEIIEAFYATLEEIIDSNIIIHVIDA-----SKSIEAIIKEI----VETRRIFERIGVH 290 Query: 275 ----IVGLSQIDTVDSDTLARKKNELATQC---GQVPFEFSSITGHGIPQILECLHD 324 I+ L++ID ++SD + K L + + S+I G +L L + Sbjct: 291 GIPIIIALNKIDLLNSDEEIKDKMRLVEKYVGENSIIVPISAINGKNTKYLLNILKE 347 >gi|269791728|ref|YP_003316632.1| ferrous iron transport protein B [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099363|gb|ACZ18350.1| ferrous iron transport protein B [Thermanaerovibrio acidaminovorans DSM 6589] Length = 668 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 13/166 (7%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNA 220 + G PN GK++ +T ++ K+ ++P T+ G V+ E ++ D+PGI + Sbjct: 6 ALAGNPNVGKTSLFNVLTGSRQKVGNWPGVTVERKEGRVRLSRGEAVVVDLPGIYGLGAT 65 Query: 221 HQGAGIGDRFLKHTERTHVLLHI-VSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 I +F+ E V+L + S L+ ++ A Q R K + L+ Sbjct: 66 SVDEQIASQFISQEEVKGVILVLDASCLDRSLYLALQI----------RERGKPVLCALN 115 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDK 325 +D + + L G + TG G+ +L CL ++ Sbjct: 116 MVDLAEKRGIRVDLKALEGALGVRVVPTVARTGQGVEDLLRCLEEE 161 >gi|254413822|ref|ZP_05027591.1| hypothetical protein MC7420_3938 [Microcoleus chthonoplastes PCC 7420] gi|196179419|gb|EDX74414.1| hypothetical protein MC7420_3938 [Microcoleus chthonoplastes PCC 7420] Length = 206 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 35/63 (55%) Query: 154 LKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADI 213 LK + I + ++G PN GKS ++T +++YP TT+ + G + G + F + D Sbjct: 32 LKTEPIPQVALVGTPNVGKSVLFNALTGTYVTVSNYPGTTVEVSRGQMTVGDRPFAVVDT 91 Query: 214 PGI 216 PG+ Sbjct: 92 PGM 94 >gi|153809896|ref|ZP_01962564.1| hypothetical protein RUMOBE_00277 [Ruminococcus obeum ATCC 29174] gi|149834074|gb|EDM89154.1| hypothetical protein RUMOBE_00277 [Ruminococcus obeum ATCC 29174] Length = 418 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 23/168 (13%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI--VKEGYKEFILADIPGIIKNA 220 I+G NAGKST L ++T A D F TL P + +K+G ++ +L D G I+ Sbjct: 204 AIVGYTNAGKSTLLNTLTGAGILAEDKLFATLDPTTRVLELKDG-QQILLTDTVGFIRKL 262 Query: 221 -HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC-----ILDELSAYNSELRKKIE 274 H L+ + ++H+V A N QA Q L EL A KKI Sbjct: 263 PHHLVEAFKSTLEEAKYADYIIHVVDA--SNPQAELQMHTVYETLRELGATG----KKI- 315 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 I L++ D V ++L + + +C S+ TG G+ ++ + L Sbjct: 316 ITLLNKQDQVQGESLRDFRADYTVKC-------SARTGEGLEELKDVL 356 >gi|323705459|ref|ZP_08117034.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacterium xylanolyticum LX-11] gi|323535361|gb|EGB25137.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacterium xylanolyticum LX-11] Length = 278 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 15/92 (16%) Query: 164 IIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGII----K 218 I+G+PN GKST + S+T+ K K + P T + +K Y F L D PGI+ + Sbjct: 123 IVGIPNVGKSTLINSLTKTKNAKTGNKPGVT--KSKQWIKTPY--FDLLDTPGILWPKFE 178 Query: 219 NAHQG------AGIGDRFLKHTERTHVLLHIV 244 + H G + I D L H E ++LL I+ Sbjct: 179 DEHVGMMLALTSAIKDELLNHEELAYLLLDIL 210 >gi|239637621|ref|ZP_04678593.1| GTP-binding protein Era [Staphylococcus warneri L37603] gi|239596839|gb|EEQ79364.1| GTP-binding protein Era [Staphylococcus warneri L37603] Length = 299 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 14/136 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G++ + I D PGI K Sbjct: 9 VSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K T ++ +V+ + E++ + I+D L +L+ + +V Sbjct: 69 HK---LGDYMMKVATNTLSEIDAIMFMVN-VNEDIGRGDEYIMDML----KDLKTPVFLV 120 Query: 277 GLSQIDTVDSDTLARK 292 L++ID V D L K Sbjct: 121 -LNKIDLVHPDALMPK 135 >gi|4914332|gb|AAD32880.1|AC005489_18 F14N23.18 [Arabidopsis thaliana] Length = 626 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 5/84 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 I G PN GKS+F+ VTRA + Y FTT LG + + D PG++ Sbjct: 202 ICGCPNVGKSSFMNKVTRADVAVQPYAFTTKSLFLGHTDYKCLRYQVIDTPGLLDRE--- 258 Query: 224 AGIGDRFLKHTERTHVLLHIVSAL 247 I DR + L HI +A+ Sbjct: 259 --IEDRNIIELCSITALAHIRAAV 280 >gi|319442278|ref|ZP_07991434.1| bifunctional cytidylate kinase/GTPase Der [Corynebacterium variabile DSM 44702] Length = 567 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 69/178 (38%), Gaps = 25/178 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKS+ L +T + D TT+ P +V+ + + D GI K Sbjct: 305 VALVGRPNVGKSSLLNKITGEDRSVVDNVAGTTVDPVDSVVELEQQMWRFVDTAGIRKKT 364 Query: 221 HQGAG----IGDRFLKHTERTHVLLHIVSALE---ENVQAAYQCILDELSAYNSELRKKI 273 G R + V + +V A E E Q + ILD A Sbjct: 365 KTARGHEFYASLRTRAAIDSAEVAIFLVDASEPIAEQDQRVLRMILDSGRAL-------- 416 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPF----EFSSITGHGI----PQILECLH 323 +V ++ D VD D + E+ Q VP+ S+ TG + P ++E L Sbjct: 417 -VVAYNKWDLVDEDRREDLEREIDQQLAHVPWARRVNISAKTGRALQRLEPAMIEALE 473 >gi|269960717|ref|ZP_06175089.1| ferrous iron transport protein B [Vibrio harveyi 1DA3] gi|269834794|gb|EEZ88881.1| ferrous iron transport protein B [Vibrio harveyi 1DA3] Length = 758 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 17/172 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I +G PN+GK+T +T AK ++ ++ T+ G K EF+L D+PGI + + Sbjct: 5 ILTVGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGQFKHAGDEFLLTDLPGIYSLDS 64 Query: 220 AHQGAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + I + TH +++++V A LE ++ Q L EL + Sbjct: 65 GNDSNSIDESIASRAVLTHPADLIINVVDATSLERSLYMTLQ--LRELG--------RPM 114 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 IV L+++D + + EL G S+ + + + E LH + Sbjct: 115 IVVLNKMDALKRERQIINVAELEKTLGCPVVSLSATSKAQVAEFKEKLHKSV 166 >gi|158336574|ref|YP_001517748.1| GTP-binding protein HflX-like protein [Acaryochloris marina MBIC11017] gi|158306815|gb|ABW28432.1| GTP-binding protein HflX-like protein [Acaryochloris marina MBIC11017] Length = 571 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 13/146 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIV---KEGYKEFILAD 212 + + ++G NAGKST L +T A+ AD F TL P L I + +L D Sbjct: 396 VPSVAVVGYTNAGKSTLLNVLTNAEAYTADQLFATLDPTTRRLSIPDPETHQMRTLVLTD 455 Query: 213 IPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 G I N + D F L+ VLLH+V + + + ++D L + Sbjct: 456 TVGFIHNL--PPPLMDAFRATLEEVTDADVLLHVVDLSHPDWENHLRSVMDLLGTM--PI 511 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNE 295 ++ +++D V S+ LA +++ Sbjct: 512 TPGPGLIAFNKMDQVSSEALAIAQDQ 537 >gi|296393368|ref|YP_003658252.1| GTP-binding proten HflX [Segniliparus rotundus DSM 44985] gi|296180515|gb|ADG97421.1| GTP-binding proten HflX [Segniliparus rotundus DSM 44985] Length = 511 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 18/138 (13%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE----FILADIPGIIKN 219 I+G NAGKS+ L ++T A I D F TL P ++ + E F + D G ++ Sbjct: 283 IVGYTNAGKSSLLGALTGASVIIRDELFATLDPT---TRKSWGETSGSFTITDTVGFVR- 338 Query: 220 AHQGAGIGDRF---LKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 H + + F L+ VL+H+V A + + ++ + + D + + Sbjct: 339 -HLPTQLVEAFASTLEEATGADVLVHVVDASDPRPADQIRVVREILGDVFAKAQTPW--P 395 Query: 273 IEIVGLSQIDTVDSDTLA 290 EIV L++ D VD TLA Sbjct: 396 TEIVALNKSDAVDEATLA 413 >gi|254374550|ref|ZP_04990031.1| hypothetical protein FTDG_00722 [Francisella novicida GA99-3548] gi|151572269|gb|EDN37923.1| hypothetical protein FTDG_00722 [Francisella novicida GA99-3548] Length = 297 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I IIG PN GKST L ++ + K I P TT + GI G +FI D PGI Sbjct: 7 ISIIGRPNVGKSTLLNNILKYKVSITSRKPQTTRHQITGIKTLGDTQFIYVDTPGI 62 >gi|330837425|ref|YP_004412066.1| GTP-binding protein Era-like-protein [Spirochaeta coccoides DSM 17374] gi|329749328|gb|AEC02684.1| GTP-binding protein Era-like-protein [Spirochaeta coccoides DSM 17374] Length = 294 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 2/89 (2%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 A + IIG P+AGKST + ++ AK I A P TT GI + + + D PG Sbjct: 4 ATVTIIGRPSAGKSTLVNTICEAKVSITARTPQTTRNAIKGIYTDSRGQLVFTDTPGYHT 63 Query: 219 NAHQ-GAGIGDRFLKHTERTHVLLHIVSA 246 + Q + D L E + ++L+++ A Sbjct: 64 SDKQFNKRLQDVALSALEDSDIILYVIDA 92 >gi|328676010|gb|AEB28685.1| GTP-binding protein HflX [Francisella cf. novicida 3523] Length = 435 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 2/94 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I +G NAGKST +T A D F TL P L ++ E I +D G I Sbjct: 201 IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSDTVGFI 260 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 KN H L+ + +L+H++ +E+ Sbjct: 261 KNLPHNLVEAFHATLEEAIESDLLVHVIDYADED 294 >gi|184201224|ref|YP_001855431.1| putative GTP-binding protein HflX [Kocuria rhizophila DC2201] gi|183581454|dbj|BAG29925.1| putative GTP-binding protein HflX [Kocuria rhizophila DC2201] Length = 552 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 15/165 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE----GYKEFILADIP 214 + + I G NAGKS+ L +T A + + F TL P + + GY LAD Sbjct: 316 VPSVAIAGYTNAGKSSLLNRLTDAGVLVENALFATLDPTVRKAQTPDGIGY---TLADTV 372 Query: 215 GIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 G +++ Q L+ V++H+V A + + + + D L+ + Sbjct: 373 GFVRSLPTQLVEAFRSTLEEVADADVIVHVVDASHPDPEGQLKAVRDVLTDVGAN--DIP 430 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 EIV L++ D D LAR +N + S+ TG GI ++ Sbjct: 431 EIVALNKSDIADPVVLARLRNHESPSVA-----VSARTGEGIEEL 470 >gi|168216032|ref|ZP_02641657.1| ferrous iron transport protein B [Clostridium perfringens NCTC 8239] gi|182381637|gb|EDT79116.1| ferrous iron transport protein B [Clostridium perfringens NCTC 8239] Length = 669 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 16/174 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK++ +T+++ I ++P T+ G +K + + + D+PG A Sbjct: 4 IALAGNPNCGKTSLFNLLTKSRQHIGNWPGVTVEKKEGTLKFKGENYKVIDLPGTYSLGA 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + I R ++ V++++V A LE N+ Q I E+ + ++ L Sbjct: 64 YSEDEIVARNYILKDKPDVVINVVDATNLERNLYLTTQLI---------EMGANV-VIAL 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 + ID ++ + N+L+ + G + S++ GI +++E I+S + E Sbjct: 114 NMIDQAEALNIEIDTNKLSKRLGVPIIKTSALKNRGIEELIET---SIYSKKNE 164 >gi|84684000|ref|ZP_01011902.1| GTP-binding protein Era [Maritimibacter alkaliphilus HTCC2654] gi|84667753|gb|EAQ14221.1| GTP-binding protein Era [Rhodobacterales bacterium HTCC2654] Length = 306 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 4/129 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST + AK I + T + G+ EG + +L D PG+ K Sbjct: 12 VALIGEPNAGKSTLTNHLVGAKVSIVTHKVQTTRARIRGVALEGDSQIVLVDTPGLFKPR 71 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 + ++ ++ V + ILD L R + + +++ Sbjct: 72 RRLDRAMVAAAWGGAADAEVIVLLIEAHRGVTKGVETILDHLPEVA---RNRPVALAINK 128 Query: 281 IDTVDSDTL 289 ID V SD L Sbjct: 129 IDKVSSDVL 137 >gi|70942690|ref|XP_741481.1| nucleolar GTP-binding protein 1 [Plasmodium chabaudi chabaudi] gi|56519888|emb|CAH77002.1| nucleolar GTP-binding protein 1, putative [Plasmodium chabaudi chabaudi] Length = 682 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 27/173 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ V+RA ++ Y FTT +G + + D PG++ Sbjct: 172 ILLAGAPNVGKSSFINYVSRANVEVQPYSFTTKNLYVGHFDHNLNRYQIIDTPGLL---- 227 Query: 222 QGAGIGDRFLKH---TERTHV--LLHIVSALEENVQAAYQC---ILDE---LSAYNSELR 270 DR L++ E T + L HI + + + +C I D+ L + S Sbjct: 228 ------DRTLENRNTIEMTTIAALAHINGVILFIIDISEECGMTIKDQINLLYSIKSLFS 281 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQC-----GQVPF-EFSSITGHGIPQ 317 K ++GL++ID D+++ + L Q V F FS++TG G+ + Sbjct: 282 NKSIVIGLNKIDKGSLDSVSVENKLLIKQIVDDIKRTVKFCSFSTLTGVGVEE 334 >gi|304404433|ref|ZP_07386094.1| GTP-binding proten HflX [Paenibacillus curdlanolyticus YK9] gi|304346240|gb|EFM12073.1| GTP-binding proten HflX [Paenibacillus curdlanolyticus YK9] Length = 429 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 2/90 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST L +T A+ + + F TL P +++ KE +L D G I Sbjct: 207 VVQVALVGYTNAGKSTLLREMTDAEVYVENQLFATLDPTSRLLELPSGKEIVLTDTVGFI 266 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA 246 +N H L+ ++LH+V + Sbjct: 267 QNLPHDLVAAFRATLEEVCEADLVLHVVDS 296 >gi|229014008|ref|ZP_04171132.1| Ferrous iron transport protein B [Bacillus mycoides DSM 2048] gi|228747264|gb|EEL97143.1| Ferrous iron transport protein B [Bacillus mycoides DSM 2048] Length = 657 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 17/166 (10%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAH 221 ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 1 MLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--KQGTLIDLPGVYDLNPVS 58 Query: 222 QGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + G+ FL T+ H +L+IV S E N+ Q + E K + I GL+ Sbjct: 59 RDEGVVTNFL-LTDEFHHMLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-GLN 107 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDK 325 ID + L+ G + TG G ++L LH++ Sbjct: 108 MIDVAKQRGIVINVKRLSEILGVTVVPVIARTGKGCEELLTTLHEE 153 >gi|209963483|ref|YP_002296398.1| GTP-binding protein hflX, putative [Rhodospirillum centenum SW] gi|209956949|gb|ACI97585.1| GTP-binding protein hflX, putative [Rhodospirillum centenum SW] Length = 430 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 15/177 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + ++G NAGKST + A D F TL P + I ++ IL+D G I + Sbjct: 184 VALVGYTNAGKSTLFNRMAGADVFAKDLLFATLDPTMRAITLPSNRKIILSDTVGFISDL 243 Query: 221 HQGAGIGDR-FLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 G R L+ + ++LH+ VS + Q A + +L EL + +E+ Sbjct: 244 PHGLVEAFRATLEEVQAADIVLHVRDVSHPDTEAQKADVETVLRELGIEVDSDARVVEV- 302 Query: 277 GLSQIDTV---DSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 L++ID V + D L R+ A + G S++TG G+ + + + ++ + R Sbjct: 303 -LNKIDLVPEGERDALLRQ----ARRTGDT-VAISALTGEGLGGLFDLIDRRMVADR 353 >gi|182679392|ref|YP_001833538.1| GTP-binding protein Era [Beijerinckia indica subsp. indica ATCC 9039] gi|182635275|gb|ACB96049.1| GTP-binding protein Era [Beijerinckia indica subsp. indica ATCC 9039] Length = 316 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 29/174 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI---- 216 + +IG PNAGKST + + AK I TT GI EG + I D PGI Sbjct: 13 VALIGAPNAGKSTLINRLVGAKISIVSRKVQTTRCLVRGIATEGASQIIFVDTPGIFAPK 72 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 + +A GAG D +L+ ++E V+A IL +L ++ Sbjct: 73 RRLDQAMVTSAWGGAGDAD-------VVALLVDARKGIDEEVEA----ILAKL----PQV 117 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECL 322 R K +++ L++IDT++ L +L + F S++ GHG+ ++ L Sbjct: 118 RAK-KLLVLNKIDTIEPPRLLALAADLNARIDFSETFMISALRGHGVDKLKNLL 170 >gi|134302062|ref|YP_001122031.1| protease, GTP-binding subunit [Francisella tularensis subsp. tularensis WY96-3418] gi|134049839|gb|ABO46910.1| GTP-binding protein [Francisella tularensis subsp. tularensis WY96-3418] Length = 435 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 15/162 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I +G NAGKST +T A D F TL P L ++ E I +D G I Sbjct: 201 IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSDTVGFI 260 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS-----------AY 265 KN H L+ + +L+H++ +E+ ++ + + LS Y Sbjct: 261 KNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIADKETICVY 320 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF 307 N K+E + S + DSD+ + L+ Q G EF Sbjct: 321 NK--IDKLENIKPSFVPLEDSDSSVVSRVYLSAQNGDGLVEF 360 >gi|194365250|ref|YP_002027860.1| GTP-binding proten HflX [Stenotrophomonas maltophilia R551-3] gi|194348054|gb|ACF51177.1| GTP-binding proten HflX [Stenotrophomonas maltophilia R551-3] Length = 436 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 1/86 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + ++G NAGKST ++T A+ AD F TL P + + +LAD G +++ Sbjct: 200 VALVGYTNAGKSTLFNAMTGAEAYAADQLFATLDPTVRRIAVPGGNVVLADTVGFVRDLP 259 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA 246 H L LLH+V A Sbjct: 260 HDLVAAFRSTLSEAREADFLLHVVDA 285 >gi|307109195|gb|EFN57433.1| hypothetical protein CHLNCDRAFT_16774 [Chlorella variabilis] Length = 301 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 18/72 (25%), Positives = 36/72 (50%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + + ++G PN GKS+ + ++ P++ +YPFTT +G + + D PG++ Sbjct: 175 VPTVALVGAPNVGKSSLVQLLSSGLPEVQNYPFTTRSIKMGHFFVLGRRHQITDTPGLLN 234 Query: 219 NAHQGAGIGDRF 230 A + +R Sbjct: 235 RAEEDRNAMERL 246 >gi|294460854|gb|ADE76000.1| unknown [Picea sitchensis] Length = 324 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 13/102 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGII--- 217 + ++G PN GKST L + K I D P TT + LG+ + +L D PG+I Sbjct: 138 VAVVGKPNVGKSTLLNQMIGQKLSIVTDKPQTTRHRILGLCSAPDYQMVLYDTPGVIQKE 197 Query: 218 ---------KNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 KN H G D L + V + EE+ Sbjct: 198 MHKLDAMMMKNVHSATGNADCVLTVVDVCRVPEKVNDLFEED 239 >gi|317485585|ref|ZP_07944461.1| GTP-binding protein HflX [Bilophila wadsworthia 3_1_6] gi|316923122|gb|EFV44332.1| GTP-binding protein HflX [Bilophila wadsworthia 3_1_6] Length = 542 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 6/88 (6%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAH 221 ++G NAGKST L ++TR++ D F TL P ++ E +LAD G I+N Sbjct: 366 ALVGYTNAGKSTLLNALTRSEVLAEDKLFATLDPTTRRLRFPEEHELVLADTVGFIRNLP 425 Query: 222 QGAGIGDRF---LKHTERTHVLLHIVSA 246 + + + F L+ E +LLH+ A Sbjct: 426 K--ELTEAFQATLEELEAADLLLHVADA 451 >gi|37674224|ref|NP_932778.1| guanine nucleotide-binding protein-like 3-like protein [Mus musculus] gi|274320439|ref|NP_001162071.1| guanine nucleotide-binding protein-like 3-like protein [Mus musculus] gi|81885776|sp|Q6PGG6|GNL3L_MOUSE RecName: Full=Guanine nucleotide-binding protein-like 3-like protein gi|34784244|gb|AAH57033.1| Guanine nucleotide binding protein-like 3 (nucleolar)-like [Mus musculus] gi|50927525|gb|AAH79653.1| Guanine nucleotide binding protein-like 3 (nucleolar)-like [Mus musculus] gi|122889911|emb|CAM14868.1| guanine nucleotide binding protein-like 3 (nucleolar)-like [Mus musculus] Length = 577 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 14/107 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGY-KEFI-LADIPGIIK 218 +G++GLPN GKS+ + S+ R++ + P T + ++E Y +FI L D PGI+ Sbjct: 249 VGVVGLPNVGKSSLINSLKRSRACSVGAVPGVTKF-----MQEVYLDKFIRLLDAPGIVP 303 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + G R H ++ L V+ +E +Q +C L+E+S+Y Sbjct: 304 GPNSEVGTILRNCIHVQK---LADPVTPVETILQ---RCNLEEISSY 344 >gi|262377478|ref|ZP_06070700.1| GTP-binding protein HflX [Acinetobacter lwoffii SH145] gi|262307534|gb|EEY88675.1| GTP-binding protein HflX [Acinetobacter lwoffii SH145] Length = 446 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 2/90 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST + + AD F TL P L ++ +G +LAD G + Sbjct: 198 VPTVSLVGYTNAGKSTLFNLLANSDVYAADQLFATLDPTLRRLEWDGIGNLVLADTVGFV 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA 246 +N +H L+ T +LLH++ + Sbjct: 258 RNLSHSLVESFKATLEETVEATLLLHVIDS 287 >gi|187931478|ref|YP_001891462.1| protease, GTP-binding subunit [Francisella tularensis subsp. mediasiatica FSC147] gi|187712387|gb|ACD30684.1| protease, GTP-binding subunit [Francisella tularensis subsp. mediasiatica FSC147] Length = 436 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 15/162 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I +G NAGKST +T A D F TL P L ++ E I +D G I Sbjct: 202 IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSDTVGFI 261 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS-----------AY 265 KN H L+ + +L+H++ +E+ ++ + + LS Y Sbjct: 262 KNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIADKETICVY 321 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF 307 N K+E + S + DSD+ + L+ Q G EF Sbjct: 322 NK--IDKLENIKPSFVPLEDSDSSVVSRVYLSAQNGDGLVEF 361 >gi|54113821|gb|AAV29544.1| NT02FT0764 [synthetic construct] Length = 435 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 15/162 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I +G NAGKST +T A D F TL P L ++ E I +D G I Sbjct: 201 IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSDTVGFI 260 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS-----------AY 265 KN H L+ + +L+H++ +E+ ++ + + LS Y Sbjct: 261 KNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIADKETICVY 320 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF 307 N K+E + S + DSD+ + L+ Q G EF Sbjct: 321 NK--IDKLENIKPSFVPLEDSDSSVVSRVYLSAQNGDGLVEF 360 >gi|325262991|ref|ZP_08129727.1| ferrous iron transport protein B [Clostridium sp. D5] gi|324032085|gb|EGB93364.1| ferrous iron transport protein B [Clostridium sp. D5] Length = 684 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGI 216 + ++G IG PN GK+T + T A K+A++P T+ G K YK EF L D+PGI Sbjct: 5 VINVGFIGNPNCGKTTLFNAYTGANLKVANWPGVTVEKKEG--KAFYKDQEFKLIDLPGI 62 >gi|168038141|ref|XP_001771560.1| predicted protein [Physcomitrella patens subsp. patens] gi|162677116|gb|EDQ63590.1| predicted protein [Physcomitrella patens subsp. patens] Length = 354 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 33/56 (58%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + ++G PN GKS+ + ++ KP++ +YPFTT ++G + + D PGI+ Sbjct: 187 VCLVGAPNVGKSSLVRILSSGKPEVCNYPFTTRGISMGHFFVDSVRYQVTDTPGIL 242 >gi|170723482|ref|YP_001751170.1| GTP-binding protein EngA [Pseudomonas putida W619] gi|229784138|sp|B1JDV4|DER_PSEPW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|169761485|gb|ACA74801.1| small GTP-binding protein [Pseudomonas putida W619] Length = 487 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 11/167 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +T+ + I D T G + FIL D GI Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGI 60 Query: 217 I-KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + ++ L E +L +V A + AA Q I + L R K I Sbjct: 61 TGDEVGMDEKMAEQSLMAIEEADYVLFLVDA-RAGMTAADQMIAEHLRK-----RNKSAI 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + ++ID +D+D +AR + +P S G GI Q++E + Sbjct: 115 LVANKIDNIDAD-VARAEFSPLGMGNAIPVAGSQ--GRGINQLMESV 158 >gi|319404019|emb|CBI77607.1| GTP-binding protein Era [Bartonella rochalimae ATCC BAA-1498] Length = 300 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 19/169 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI---- 216 + +IG+PNAGKST + + K I + TT GIV + IL D PG+ Sbjct: 12 VALIGVPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLVRGIVIYDKTQIILIDTPGVFRPH 71 Query: 217 --IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 ++ A A G K+ + VL+ S + V A +LD L + + + Sbjct: 72 KRLERAMVSAAWGGA--KNADILLVLIDAQSGFSDEVDA----MLDILKSIEQD-----K 120 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQV-PFEFSSITGHGIPQILECL 322 I+ L++IDTV +L +++ + + F S++ G G +L L Sbjct: 121 ILVLNKIDTVVKSSLLALTAKVSERVNFLQTFMISALNGSGCKDLLHYL 169 >gi|317470583|ref|ZP_07929970.1| ferrous iron transporter B [Anaerostipes sp. 3_2_56FAA] gi|316901931|gb|EFV23858.1| ferrous iron transporter B [Anaerostipes sp. 3_2_56FAA] Length = 659 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 32/55 (58%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +G +G PN GK+T + T AK K+A++P T+ G +K + L D+PGI Sbjct: 8 VGFVGNPNCGKTTLFNAYTGAKLKVANWPGVTVEKKEGALKYHNHMYRLVDLPGI 62 >gi|313903264|ref|ZP_07836656.1| GTP-binding protein Era [Thermaerobacter subterraneus DSM 13965] gi|313466352|gb|EFR61874.1| GTP-binding protein Era [Thermaerobacter subterraneus DSM 13965] Length = 345 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 12/166 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PN GKST L + K I +D P TT LG++ + + D PGI K Sbjct: 57 VALIGRPNVGKSTLLNQLIGRKIAIMSDKPQTTRTRILGVLNRPGAQLVFVDTPGIHKPQ 116 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H +G+ ++ RT + +V A + + I ++L+ + + + + Sbjct: 117 HL---LGEHMVQIARRTLQEVEAVCWLVEAPDREPGPGDRFIAEQLAGLKTP--RVLVVN 171 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + Q+ + +A + EL T P S++ G G+ +++ L Sbjct: 172 KIDQVAPGEVPAIAARFAELGTFAAVHP--VSALHGVGVAELVGTL 215 >gi|296436825|gb|ADH18995.1| GTP binding protein [Chlamydia trachomatis G/11222] Length = 447 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 14/173 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I +IG N+GKST L +T A + + F TL P V + +L D G I Sbjct: 226 IPTFALIGYTNSGKSTLLNLLTSADTYVENKLFATLDPKTRRCVLPCGQRVLLTDTVGFI 285 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKKI 273 + H L+ + +LLH+V A L + IL EL ++ Sbjct: 286 RKLPHTLVAAFKSTLEAALQEDILLHVVDASHPLALEYVETTKAILQELGITQPQV---- 341 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I L+++D V A + ++ P S+ TG GI ++L + D + Sbjct: 342 -ITVLNKMDKVADGVTASRLRLMSPN----PVCVSAKTGEGIRELLRSMEDMV 389 >gi|225021779|ref|ZP_03710971.1| hypothetical protein CORMATOL_01807 [Corynebacterium matruchotii ATCC 33806] gi|224945475|gb|EEG26684.1| hypothetical protein CORMATOL_01807 [Corynebacterium matruchotii ATCC 33806] Length = 291 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 18/157 (11%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PN GKST ++ K I A+ P TT +P GIV + I+ D PG+ + Sbjct: 4 VGRPNTGKSTLTNALVGQKIAITANQPETTRHPIRGIVHRDDAQIIVVDTPGLHR---PR 60 Query: 224 AGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL-S 279 +G+R +K T L+ I +E + + ILD + ++ K ++G+ + Sbjct: 61 TLLGERLNEVVKDTYADMDLIAITIPADEKIGPGDRWILDNV----RKVAPKTPLMGIVT 116 Query: 280 QIDTVDSDTLARKKNELATQCGQ----VPFEFSSITG 312 +ID V D +A + L G+ VP S++TG Sbjct: 117 KIDKVSRDQVALQLMALHKLLGEDSEVVP--VSAVTG 151 >gi|149186755|ref|ZP_01865066.1| GTP-binding protein Era [Erythrobacter sp. SD-21] gi|148829663|gb|EDL48103.1| GTP-binding protein Era [Erythrobacter sp. SD-21] Length = 310 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIV----KEGYKEFILADIPGI 216 + +IG PNAGKST + + K I TT LGI +E + +L D PGI Sbjct: 17 VAVIGAPNAGKSTLVNQLVGQKVAITSAKAQTTRARMLGIALHKSEEADTQMVLIDTPGI 76 Query: 217 IKNAHQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE- 274 + + TE +L +V +++ EL L K+ E Sbjct: 77 FSPKRKLDRAMVSAAWDGTESADAVLLMVDPIKQRRH--------ELEPLVEALAKRPER 128 Query: 275 -IVGLSQIDTVDSDTLARKKNELATQC--GQVPFEFSSITGHGIPQILECL 322 I+ L+++D + L ELA + +V F S++T G+P++ E L Sbjct: 129 KILVLNKVDAAKKEPLLALAQELAEKVEFAEVYF-VSALTSDGVPELKESL 178 >gi|77919006|ref|YP_356821.1| GTP-binding protein Era [Pelobacter carbinolicus DSM 2380] gi|77545089|gb|ABA88651.1| GTP-binding protein Era [Pelobacter carbinolicus DSM 2380] Length = 303 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 5/71 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST L SV K I ++ P TT LGI + + + D PG+ Sbjct: 16 VAIIGRPNVGKSTLLNSVLGQKIAITSNKPQTTRNRILGIYNQPDAQVLFLDTPGV---- 71 Query: 221 HQGAGIGDRFL 231 H+ G+ +R++ Sbjct: 72 HKAKGMLNRYM 82 >gi|56707756|ref|YP_169652.1| protease, GTP-binding subunit [Francisella tularensis subsp. tularensis SCHU S4] gi|110670227|ref|YP_666784.1| protease, GTP-binding subunit [Francisella tularensis subsp. tularensis FSC198] gi|224456826|ref|ZP_03665299.1| protease, GTP-binding subunit [Francisella tularensis subsp. tularensis MA00-2987] gi|254370260|ref|ZP_04986265.1| protease [Francisella tularensis subsp. tularensis FSC033] gi|254874569|ref|ZP_05247279.1| protease [Francisella tularensis subsp. tularensis MA00-2987] gi|56604248|emb|CAG45264.1| protease, GTP-binding subunit [Francisella tularensis subsp. tularensis SCHU S4] gi|110320560|emb|CAL08647.1| protease, GTP-binding subunit [Francisella tularensis subsp. tularensis FSC198] gi|151568503|gb|EDN34157.1| protease [Francisella tularensis subsp. tularensis FSC033] gi|254840568|gb|EET19004.1| protease [Francisella tularensis subsp. tularensis MA00-2987] gi|282158927|gb|ADA78318.1| protease, GTP-binding subunit [Francisella tularensis subsp. tularensis NE061598] Length = 435 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 15/162 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I +G NAGKST +T A D F TL P L ++ E I +D G I Sbjct: 201 IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSDTVGFI 260 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS-----------AY 265 KN H L+ + +L+H++ +E+ ++ + + LS Y Sbjct: 261 KNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIADKETICVY 320 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF 307 N K+E + S + DSD+ + L+ Q G EF Sbjct: 321 NK--IDKLENIKPSFVPLEDSDSSVVSRVYLSAQNGDGLVEF 360 >gi|322372543|ref|ZP_08047079.1| GTP-binding protein Era [Streptococcus sp. C150] gi|321277585|gb|EFX54654.1| GTP-binding protein Era [Streptococcus sp. C150] Length = 299 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 15/171 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEPRGKGDDMIIERLKQAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ TQ + S++ G+ + +++ L D + Sbjct: 119 VVNKIDKVHPDQLLEQIDDFRTQMDFKEIIPISALQGNNVSHLVDVLSDNL 169 >gi|322391812|ref|ZP_08065277.1| GTP-binding protein Era [Streptococcus peroris ATCC 700780] gi|321145292|gb|EFX40688.1| GTP-binding protein Era [Streptococcus peroris ATCC 700780] Length = 299 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEARGKGDDMIMERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + +++ L D + Sbjct: 119 VVNKIDKVHPDQLLAQIDDFRNQMDFKEIVP--ISALQGNNVSHLVDILSDNL 169 >gi|254525288|ref|ZP_05137343.1| GTP-binding proten HflX [Stenotrophomonas sp. SKA14] gi|219722879|gb|EED41404.1| GTP-binding proten HflX [Stenotrophomonas sp. SKA14] Length = 436 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 1/86 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + ++G NAGKST ++T A+ AD F TL P + + +LAD G +++ Sbjct: 200 VALVGYTNAGKSTLFNAMTGAEAYAADQLFATLDPTVRRIAVPGGNVVLADTVGFVRDLP 259 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA 246 H L LLH+V A Sbjct: 260 HDLVAAFRSTLSEAREADFLLHVVDA 285 >gi|111023736|ref|YP_706708.1| GTP-binding protein [Rhodococcus jostii RHA1] gi|110823266|gb|ABG98550.1| GTP-binding protein [Rhodococcus jostii RHA1] Length = 484 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 25/185 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGIIKN 219 I I+G NAGKS+ L ++T + + + F TL P + +G +E++L D G ++ Sbjct: 262 IAIVGYTNAGKSSLLNALTGSGVLVQNALFATLDPTTRRAALDDG-REYVLTDTVGFVR- 319 Query: 220 AHQGAGIGDRF---LKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 H + + F L+ +LLH+V + + ++A ++ I + + ++ Sbjct: 320 -HLPTQLIEAFRSTLEEVTDADLLLHVVDGSDPLPTDQIRAVHEVITEVIRENDAA--AP 376 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQILECLHDKIFSIR 330 E++ +++ID D TL + + G +P S+ TG GI ++ L D + IR Sbjct: 377 PELIVVNKIDAADPVTLTQLR-------GLLPGASFVSARTGEGIAELRAHLSDVL--IR 427 Query: 331 GENEF 335 E E Sbjct: 428 PEIEV 432 >gi|77164340|ref|YP_342865.1| small GTP-binding protein domain-containing protein [Nitrosococcus oceani ATCC 19707] gi|254434862|ref|ZP_05048370.1| GTPase, putative [Nitrosococcus oceani AFC27] gi|123757906|sp|Q3JCW1|DER_NITOC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|76882654|gb|ABA57335.1| Small GTP-binding domain protein [Nitrosococcus oceani ATCC 19707] gi|207091195|gb|EDZ68466.1| GTPase, putative [Nitrosococcus oceani AFC27] Length = 464 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 16/110 (14%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 A + ++G PN GKST +TR++ + D P T G+ G + F + D G+++ Sbjct: 3 ALVALVGRPNVGKSTLFNRLTRSRDALVVDQPGVTRDRKYGLAHYGEQSFFVVDTGGVME 62 Query: 219 NAHQGAGIGDRFLK-----HTERTHVLLHIV------SALEENVQAAYQC 257 Q +GIG R ++ E V+ +V S+L+E + A +C Sbjct: 63 ---QESGIG-RLMRAQAQLAIEEADVIFFLVDGREGLSSLDEEIAAWLRC 108 >gi|300864576|ref|ZP_07109435.1| GTP-binding protein Era [Oscillatoria sp. PCC 6506] gi|300337400|emb|CBN54583.1| GTP-binding protein Era [Oscillatoria sp. PCC 6506] Length = 350 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 21/170 (12%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNAH 221 GIIG PN GKST + + K I T L GI+ + I D PGI K H Sbjct: 61 GIIGRPNVGKSTLMNQLVGQKIAITSPVAQTTRNRLRGILTTEEAQIIFVDTPGIHKPHH 120 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC------ILDELSAYNSELRKKIEI 275 Q + L H + +H V L V A+ I+D L + + I Sbjct: 121 QLG----KVLVHN--AQLAIHSVDVLLFVVDASVPAGGGDRYIVDLLVNTQTPV-----I 169 Query: 276 VGLSQIDTVDSDTLARKKNELA--TQCGQVPF-EFSSITGHGIPQILECL 322 +GL++ D S++ A+ N + Q P +FS++TG G+ + + L Sbjct: 170 LGLNKSDQQPSESQAQLDNTYTQLIEAKQWPIVKFSALTGEGVEALQQIL 219 >gi|190573719|ref|YP_001971564.1| putative GTP-binding phage-like protein [Stenotrophomonas maltophilia K279a] gi|190011641|emb|CAQ45260.1| putative GTP-binding phage-related protein [Stenotrophomonas maltophilia K279a] Length = 436 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 1/86 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + ++G NAGKST ++T A+ AD F TL P + + +LAD G +++ Sbjct: 200 VALVGYTNAGKSTLFNAMTGAEAYAADQLFATLDPTVRRIAVPGGNVVLADTVGFVRDLP 259 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA 246 H L LLH+V A Sbjct: 260 HDLVAAFRSTLSEAREADFLLHVVDA 285 >gi|77735567|ref|NP_001029479.1| guanine nucleotide-binding protein-like 3-like protein [Bos taurus] gi|122145091|sp|Q3T0J9|GNL3L_BOVIN RecName: Full=Guanine nucleotide-binding protein-like 3-like protein gi|74354000|gb|AAI02364.1| Guanine nucleotide binding protein-like 3 (nucleolar)-like [Bos taurus] gi|296470683|gb|DAA12798.1| guanine nucleotide-binding protein-like 3-like protein [Bos taurus] Length = 575 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 14/107 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGY-KEFI-LADIPGIIK 218 +G++GLPN GKS+ + S+ R++ + P T + ++E Y +FI L D PGI+ Sbjct: 248 VGVVGLPNVGKSSLINSLKRSRACSVGAVPGVTKF-----MQEVYLDKFIRLLDAPGIVP 302 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + G R H ++ L V+ +E +Q +C L+E+S+Y Sbjct: 303 GPNSEVGTILRNCIHVQK---LADPVTPVETILQ---RCNLEEISSY 343 >gi|254468036|ref|ZP_05081442.1| GTP-binding proten HflX [beta proteobacterium KB13] gi|207086846|gb|EDZ64129.1| GTP-binding proten HflX [beta proteobacterium KB13] Length = 378 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 20/169 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G NAGKST +T+ K AD F TL + + +++D G IKN Sbjct: 203 VAIVGYTNAGKSTLFNELTKQKIYAADQLFATLDTTSRKLFIPPSTSLVISDTVGFIKNL 262 Query: 221 HQGAGIGDRF---LKHTERTHVLLHIV-SALEENVQAAYQC--ILDELSAYNSELRKKIE 274 + + F L+ + +LLH+V S EE + Q IL E+ A + + Sbjct: 263 --PTNLIESFKSTLEESTSADLLLHVVDSTNEEKKEHIDQVNRILKEIHADQVD-----Q 315 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECL 322 I+ L+QID +++L +K + G++ E S+ TG GI + E L Sbjct: 316 ILILNQIDK--NNSLPQKD---IDEYGRIKRIELSAKTGQGIEFLKEAL 359 >gi|167745857|ref|ZP_02417984.1| hypothetical protein ANACAC_00551 [Anaerostipes caccae DSM 14662] gi|167654721|gb|EDR98850.1| hypothetical protein ANACAC_00551 [Anaerostipes caccae DSM 14662] Length = 659 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 32/55 (58%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +G +G PN GK+T + T AK K+A++P T+ G +K + L D+PGI Sbjct: 8 VGFVGNPNCGKTTLFNAYTGAKLKVANWPGVTVEKKEGALKYHNHMYRLVDLPGI 62 >gi|291320054|ref|YP_003515312.1| GTP binding protein era [Mycoplasma agalactiae] gi|290752383|emb|CBH40354.1| GTP binding protein era [Mycoplasma agalactiae] Length = 290 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 10/166 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I+G PN GKS+ L + + I ++ P TT +G+ E +F+ D PGI K Sbjct: 6 ISILGRPNVGKSSLLNKIIKYDLAIVSNVPQTTRDQIMGVYTEDGYQFVFVDTPGIHKPL 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + G + + +L + S + E++++ + IL+ + + + KI I+ S Sbjct: 66 NLLGESLNKEAFSSLKDIDCVLFL-SPVNEDIKSGDKLILERI----TNAKNKIAII--S 118 Query: 280 QIDTVDS-DTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 +ID S D +A+K ++L S+ + ++E L + Sbjct: 119 KIDLAKSPDEIAKKIDDLKEYGFSKIISVSNKNDKSVDSLIEILKE 164 >gi|294084362|ref|YP_003551120.1| GTPase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663935|gb|ADE39036.1| GTPase [Candidatus Puniceispirillum marinum IMCC1322] Length = 430 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 14/175 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + +IG NAGKST +T A D F TL P + G+ + +LAD G I + Sbjct: 200 LALIGYTNAGKSTLFNMLTGADVLSKDMLFATLDPTMRGMKLPSGRRAVLADTVGFI--S 257 Query: 221 HQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQ--C-ILDELSAYNSELRKKIE 274 + + F L+ +L+H+ A V Y C IL+EL ++E++ + Sbjct: 258 QLPTELVEAFKSTLEEVVEADILVHVHDASSPMVAEEYADVCQILEEL-GLDAEMQAERV 316 Query: 275 IVGLSQIDTVDS---DTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I L++ D +D D + L G F S++TG GI L L +KI Sbjct: 317 IHILNKSDKIDDMAGDMAGETREYLENLVGNGVF-VSALTGAGIDDALLALDEKI 370 >gi|226356907|ref|YP_002786647.1| GTP-binding protein, HflX subfamily [Deinococcus deserti VCD115] gi|226318897|gb|ACO46893.1| putative GTP-binding protein, HflX subfamily [Deinococcus deserti VCD115] Length = 569 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 75/176 (42%), Gaps = 23/176 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRA--KPK---IADYPFTTLYPN--LGIVKEGYKEFILADIP 214 + I+G NAGKST L + T A +P+ + F TL P G + G +L D Sbjct: 384 VSIVGYTNAGKSTLLNTFTHAAEEPRRVLAENKLFATLRPTSRQGFI-HGVGPVVLTDTV 442 Query: 215 GIIKNAHQGAGIGDR-FLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELR 270 G I++ + R L+ VLLH+V A A IL+EL R Sbjct: 443 GFIRDLPKDLTRAFRSTLEEIGDADVLLHVVDAASPGADTRLDAVNRILEELG-----FR 497 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +V L++ D D + LAR E+ G S++ G+ ++ E L D I Sbjct: 498 DMPTVVALNKADAADPEQLAR---EVERTDG---IAVSALRNIGLAELKEALADAI 547 >gi|118497735|ref|YP_898785.1| GTP-binding protein Era [Francisella tularensis subsp. novicida U112] gi|194323707|ref|ZP_03057483.1| GTP-binding protein Era [Francisella tularensis subsp. novicida FTE] gi|118423641|gb|ABK90031.1| GTP-binding protein [Francisella novicida U112] gi|194322071|gb|EDX19553.1| GTP-binding protein Era [Francisella tularensis subsp. novicida FTE] Length = 297 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I IIG PN GKST L ++ + K I P TT + GI G +FI D PGI Sbjct: 7 ISIIGRPNVGKSTLLNNILKYKVSITSRKPQTTRHQITGIKTLGDTQFIYVDTPGI 62 >gi|218708645|ref|YP_002416266.1| GTP-binding protein EngA [Vibrio splendidus LGP32] gi|254783178|sp|B7VJU2|DER_VIBSL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|218321664|emb|CAV17618.1| GTP-binding protein engA [Vibrio splendidus LGP32] Length = 493 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRRRK 267 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + + LK E +V+L ++ A E + L+A S ++ Sbjct: 268 NINETVEKFSVVKTLKAIEDANVVLLLIDARENISDQDLSLLGFALNAGRS------IVI 321 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D+D R K EL + G V F S++ G G+ + E + + Sbjct: 322 AVNKWDGLDNDVKDRVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 373 >gi|319952376|ref|YP_004163643.1| gtp-binding protein era-like-protein [Cellulophaga algicola DSM 14237] gi|319421036|gb|ADV48145.1| GTP-binding protein Era-like-protein [Cellulophaga algicola DSM 14237] Length = 295 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + A V I TT + LGIV + IL+D PGIIK A Sbjct: 9 VNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGDDFQMILSDTPGIIKPA 68 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIV 244 ++ F+K E +L+++V Sbjct: 69 YELQSSMMDFVKSAFEDADILIYMV 93 >gi|269967952|ref|ZP_06181992.1| ferrous iron transport protein B [Vibrio alginolyticus 40B] gi|269827475|gb|EEZ81769.1| ferrous iron transport protein B [Vibrio alginolyticus 40B] Length = 758 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 17/169 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G K EF+L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGQFKHAGDEFLLTDLPGIYSLDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH +++++V A LE ++ Q EL + + IV Sbjct: 68 SNSIDESIASRAVLTHPADLIINVVDATSLERSLYMTLQL---------RELGRPM-IVV 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L+++D + + EL G S+ + + E LH I Sbjct: 118 LNKMDALKRERQMINVAELEKTLGCPVVSLSATNKTQVAEFKEKLHKSI 166 >gi|189485147|ref|YP_001956088.1| GTP-binding protein EngA [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287106|dbj|BAG13627.1| GTP-binding protein EngA [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 441 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 9/82 (10%) Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYK 206 +EK W LK+I ++G PN GKS+F+ +V + + I D P TT ++ K Sbjct: 169 KEKNTWKTLKII----LVGKPNVGKSSFINTVAKEERSIVHDTPGTTRDSLTARIQSDGK 224 Query: 207 EFILADIPGIIKNAHQGAGIGD 228 E+IL D G+ H+G D Sbjct: 225 EYILTDTAGL----HRGNKTKD 242 >gi|78355423|ref|YP_386872.1| GTP-binding protein HflX [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217828|gb|ABB37177.1| GTP-binding protein HflX [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 490 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 12/132 (9%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAH 221 ++G NAGKST L ++T A D F TL ++ +E I+ D G I++ Sbjct: 326 SLVGYTNAGKSTLLNTLTNADVLAEDKLFATLDTTTRRLRFPQERELIVTDTVGFIRSLP 385 Query: 222 QGAGIGDR-FLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKIEIV 276 + R L+ E +LLH+ A LE ++A + ILDEL EL+ ++ Sbjct: 386 KELKEAFRATLEELEAADLLLHVADAGHPELEMQLRAVEE-ILDEL-----ELQDIPRLL 439 Query: 277 GLSQIDTVDSDT 288 L++ +T+D +T Sbjct: 440 VLNKWETLDDET 451 >gi|208779800|ref|ZP_03247144.1| GTP-binding protein Era [Francisella novicida FTG] gi|254373099|ref|ZP_04988588.1| hypothetical protein FTCG_00677 [Francisella tularensis subsp. novicida GA99-3549] gi|151570826|gb|EDN36480.1| hypothetical protein FTCG_00677 [Francisella novicida GA99-3549] gi|208744255|gb|EDZ90555.1| GTP-binding protein Era [Francisella novicida FTG] Length = 297 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I IIG PN GKST L ++ + K I P TT + GI G +FI D PGI Sbjct: 7 ISIIGRPNVGKSTLLNNILKYKVSITSRKPQTTRHQITGIKTLGDTQFIYVDTPGI 62 >gi|86145598|ref|ZP_01063928.1| GTP-binding protein EngA [Vibrio sp. MED222] gi|85836569|gb|EAQ54695.1| GTP-binding protein EngA [Vibrio sp. MED222] Length = 493 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRRRK 267 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + + LK E +V+L ++ A E + L+A S ++ Sbjct: 268 NINETVEKFSVVKTLKAIEDANVVLLLIDARENISDQDLSLLGFALNAGRS------IVI 321 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D+D R K EL + G V F S++ G G+ + E + + Sbjct: 322 AVNKWDGLDNDVKDRVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 373 >gi|84387629|ref|ZP_00990646.1| GTP-binding protein EngA [Vibrio splendidus 12B01] gi|84377474|gb|EAP94340.1| GTP-binding protein EngA [Vibrio splendidus 12B01] Length = 493 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRRRK 267 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + + LK E +V+L ++ A + + L+A S ++ Sbjct: 268 NINETVEKFSVVKTLKAIEDANVVLLLIDARDNISDQDLSLLGFALNAGRS------IVI 321 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +DSD R K EL + G V F S++ G G+ + E + + Sbjct: 322 AVNKWDGLDSDVKDRVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 373 >gi|124027059|ref|YP_001012379.1| ferrous iron transport protein [Hyperthermus butylicus DSM 5456] gi|123977753|gb|ABM80034.1| Ferrous iron transport protein [Hyperthermus butylicus DSM 5456] Length = 717 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 15/167 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + ++G PN GKST ++T +A++P T+ + + G K D+PG I Sbjct: 24 VALVGNPNVGKSTLFNTLTGKTAHVANWPGVTVELEAAVSRYGDKTICFVDLPGTYGISA 83 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + Q + F+ T V+L I +A E + A Q + EL ++ ++ Sbjct: 84 SSQEEVVAREFIV-TGIPDVILVIADATAPERTLYLALQIL---------ELTARV-VIA 132 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 L+++D S + +EL + G S++ GI +++ L D Sbjct: 133 LNKMDLAHSMGIHIHVDELEKKLGVPVVTVSALQRLGIDELMRTLID 179 >gi|77919639|ref|YP_357454.1| GTP-binding protein [Pelobacter carbinolicus DSM 2380] gi|77545722|gb|ABA89284.1| GTP-binding protein [Pelobacter carbinolicus DSM 2380] Length = 547 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 7/107 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 I I+G NAGKST L ++T+++ D F TL + ++ +E I+ D G I+ Sbjct: 380 ISIVGYTNAGKSTLLNALTQSEVFTEDLLFATLDTSSRRLRFPMEREVIITDTVGFIRKL 439 Query: 221 HQG-AGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDEL 262 + G L+ E +LLH+V EE++ +A + IL+EL Sbjct: 440 PKSLVGAFRATLEELEDADLLLHVVDVSHPRFEEHI-SAVEAILNEL 485 >gi|260438652|ref|ZP_05792468.1| ferrous iron transport protein B [Butyrivibrio crossotus DSM 2876] gi|292809246|gb|EFF68451.1| ferrous iron transport protein B [Butyrivibrio crossotus DSM 2876] Length = 798 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K KE + D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLKFD-KEVTIMDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ER +L+IV + LE N+ + Q + EL I+I+ Sbjct: 64 YTLEEVVARTYLINERPDAILNIVDGTNLERNLYLSTQIM--ELGIPVVMAVNMIDILEK 121 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + DTVD+D L+ K G + S++ G GI + E Sbjct: 122 TG-DTVDTDKLSEK-------LGCTVVKISALKGRGIKEAAE 155 >gi|109899427|ref|YP_662682.1| GTP-binding protein EngA [Pseudoalteromonas atlantica T6c] gi|123170868|sp|Q15R60|DER_PSEA6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|109701708|gb|ABG41628.1| small GTP-binding protein [Pseudoalteromonas atlantica T6c] Length = 482 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 13/161 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYEGLQFIVVDTGG-ISGD 63 Query: 221 HQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 QG + ++ L + V+L +V A + AA Q I + L N K + +V Sbjct: 64 EQGIDMAMANQSLMAIDEADVVLFLVDA-RAGLTAADQGIAEHLRKQN----KSVYVVA- 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 +++D +D D+ + A G V + ++ G G+ Q+L Sbjct: 118 NKVDGIDGDS--ESADFFALGLGDVN-QIAAAHGRGVTQLL 155 >gi|323509247|dbj|BAJ77516.1| cgd4_1700 [Cryptosporidium parvum] Length = 559 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 11/139 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ V+ A ++ Y FTT +G Y + + D PGI+ Sbjct: 177 VCGYPNVGKSSFINCVSHANVEVEPYAFTTKSLYVGHFDYNYARWQVIDTPGILDRP--- 233 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + +R L HI S + V + +C I + ++S R K + Sbjct: 234 --LDERNTIEMTAITALAHIHSCILYFVDISEECGYSIEKQTKLFHSIKTLFRNKPVFII 291 Query: 278 LSQIDTVDSDTLARKKNEL 296 L++ID+ D L+ ++ ++ Sbjct: 292 LNKIDSRSVDDLSPEEKKM 310 >gi|268325133|emb|CBH38721.1| conserved hypothetical protein, GTPase of unknown function family [uncultured archaeon] Length = 187 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 23/171 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I ++G PN GKS F +T AK ++YP TT+ G ++ G ++ L D+PG Sbjct: 3 ILLMGHPNVGKSVFFNRLTGAKVFESNYPGTTVDFMKGWMRIGGEDVELIDVPGTFS--- 59 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE------- 274 L+ ++ + V LEEN + C+LD S L +E Sbjct: 60 ---------LEPKDKAEEVS--VQMLEENQDSVVVCVLDA-SKVERGLYLALEIIEKGYP 107 Query: 275 -IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 I+ L+ D + ++ +L G ++I+G G +++ ++D Sbjct: 108 VIIALNMWDVAEDKNISIDAEKLEEILGVPVVPTTAISGEGFKELVSRIND 158 >gi|238924771|ref|YP_002938287.1| small GTP-binding protein domain protein [Eubacterium rectale ATCC 33656] gi|238876446|gb|ACR76153.1| small GTP-binding protein domain protein [Eubacterium rectale ATCC 33656] gi|291527180|emb|CBK92766.1| GTP-binding protein HflX [Eubacterium rectale M104/1] Length = 415 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 4/100 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + I+G NAGKST L +T A D F TL P I+ +G ++ +L D G I+ Sbjct: 204 VAIVGYTNAGKSTLLNHLTEADVLEEDKLFATLDPTTRILALDGKQQVLLTDTVGFIRKL 263 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL 259 H L+ + ++ H+V A N+Q Q + Sbjct: 264 PHHLIEAFKSTLEEAKYADIIFHVVDA--SNMQREKQMFI 301 >gi|111225063|ref|YP_715857.1| ATP/GTP-binding protein [Frankia alni ACN14a] gi|111152595|emb|CAJ64336.1| ATP/GTP-binding protein [Frankia alni ACN14a] Length = 491 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 80/171 (46%), Gaps = 17/171 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGIIKN 219 + I G NAGKS+ L +T A + D F TL P + + +G + F L D G +++ Sbjct: 275 VAIAGYTNAGKSSLLNRLTGAGVLVEDALFATLDPTVRRATLPDG-RAFTLTDTVGFVRH 333 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQ-AAYQCILDELSAYNSELRKKIEI 275 HQ L+ ++LH+V SA + Q +A + +L+++ A N E+ Sbjct: 334 LPHQIVEAFRSTLEEVADADLILHVVDGSAPDPAAQISAVREVLNDIDAGNVA-----EL 388 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + ++++D + LA + Q S+ TG G+ +++ L ++ Sbjct: 389 IVVNKVDATEPTVLAGLR-----QLAPDAVFVSARTGEGLTALVDALCARV 434 >gi|254369164|ref|ZP_04985176.1| hypothetical protein FTAG_00104 [Francisella tularensis subsp. holarctica FSC022] gi|157122114|gb|EDO66254.1| hypothetical protein FTAG_00104 [Francisella tularensis subsp. holarctica FSC022] Length = 297 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I IIG PN GKST L ++ + K I P TT + GI G +FI D PGI Sbjct: 7 ISIIGRPNVGKSTLLNNILKYKVSITSRKPQTTRHQITGIKTLGDTQFIYVDTPGI 62 >gi|94496399|ref|ZP_01302976.1| GTPase [Sphingomonas sp. SKA58] gi|94424145|gb|EAT09169.1| GTPase [Sphingomonas sp. SKA58] Length = 444 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 15/178 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 I ++G NAGKST +T A+ D F TL P + I G + IL+D G + + Sbjct: 211 IALVGYTNAGKSTLFNRLTGAEVMAEDLLFATLDPTMRQIALPGLDKAILSDTVGFVSDL 270 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE----- 274 Q L+ +++H+ + A +LD L +E Sbjct: 271 PTQLIAAFRATLEEVLSADLIVHVRDIAHPDSDAQRDDVLDVLGELGVTGEAALERGEGT 330 Query: 275 ------IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I +++D +D+D+++ + + A + V S++TG G+ Q+ + D + Sbjct: 331 SEPPPIIEAWNKLDLLDADSMSLVREQAARREDVVI--LSALTGEGMDQLQRMISDHM 386 >gi|110633964|ref|YP_674172.1| GTP-binding protein, HSR1-related [Mesorhizobium sp. BNC1] gi|110284948|gb|ABG63007.1| GTP-binding protein, HSR1-related protein [Chelativorans sp. BNC1] Length = 460 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 15/173 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + I+G NAGKST +T A D F TL P L V+ + IL+D G I + Sbjct: 232 VAIVGYTNAGKSTLFNRLTGASVLAEDMLFATLDPTLRRVRFPHGTVVILSDTVGFISDL 291 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEI 275 H A L+ V+LH+ + + A + +L L S+ + +E+ Sbjct: 292 PPHLVAAFRA-TLEEVVEADVILHLRDISDPDTAAHARDVEQVLASLGVDTSDPARAVEV 350 Query: 276 VG-LSQIDTVDSDTLARKK-NELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + ++ D + L R N+ A P S+ITG GI ++ + +++ Sbjct: 351 WNKIDRLSEADRERLLRDDINKTA------PIAISAITGEGIEDLMALVEERL 397 >gi|319440588|ref|ZP_07989744.1| GTPase Era [Corynebacterium variabile DSM 44702] Length = 325 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 12/140 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +G PN GKST ++ K I AD P TT +P GIV + I+ D PG+ + Sbjct: 36 VSFVGRPNTGKSTLTNALVGEKIAITADQPETTRHPIRGIVHRRDSQVIVVDTPGLHRPR 95 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 +G+R + + T+ + ++ +E + + ILD + A K ++G Sbjct: 96 ---TLLGERLNEVVKETYADVDVIGLCIPADEKIGPGDRWILDAVRASAP----KTPVIG 148 Query: 278 L-SQIDTVDSDTLARKKNEL 296 + +++D D + + EL Sbjct: 149 IVTKLDKTSKDQVGAQLMEL 168 >gi|242240151|ref|YP_002988332.1| GTP-binding protein EngA [Dickeya dadantii Ech703] gi|242132208|gb|ACS86510.1| small GTP-binding protein [Dickeya dadantii Ech703] Length = 494 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 10/134 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIIDTGG- 59 Query: 217 IKNAHQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I + G + ++ L+ E ++L +V A + + A D A + R+K Sbjct: 60 IDGSEDGVETRMAEQSLQAIEEADIVLFLVDARDGLMPA------DHAIAQHLRTREKAT 113 Query: 275 IVGLSQIDTVDSDT 288 + +++D +D DT Sbjct: 114 FLVANKVDGIDIDT 127 >gi|161353525|ref|YP_500179.2| GTP-binding protein Era [Staphylococcus aureus subsp. aureus NCTC 8325] gi|317374940|sp|Q2FY06|ERA_STAA8 RecName: Full=GTPase Era gi|329728341|gb|EGG64778.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus 21189] Length = 299 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 14/142 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G++ + I D PGI K Sbjct: 9 VSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++ +V+A EE + + I++ L + + + Sbjct: 69 HK---LGDYMMKVAKNTLSEIDAIMFMVNANEE-IGRGDEYIIEMLKNVKTPV-----FL 119 Query: 277 GLSQIDTVDSDTLARKKNELAT 298 L++ID V D L K E + Sbjct: 120 VLNKIDLVHPDELMPKIEEYQS 141 >gi|313235142|emb|CBY25014.1| unnamed protein product [Oikopleura dioica] Length = 646 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+ + +TRA ++ Y FTT +G + Y ++ + D PGI+ + Sbjct: 174 LAGFPNVGKSSLINLLTRADVEVQPYAFTTKSLYIGHMDYKYLKWQVIDTPGILDHE--- 230 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + +R + L H+ +A+ V + QC Sbjct: 231 --LEERNTIEWQSVTALAHLKAAIVYIVDISEQC 262 >gi|297843838|ref|XP_002889800.1| hypothetical protein ARALYDRAFT_888292 [Arabidopsis lyrata subsp. lyrata] gi|297335642|gb|EFH66059.1| hypothetical protein ARALYDRAFT_888292 [Arabidopsis lyrata subsp. lyrata] Length = 668 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 28/54 (51%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+F+ VTRA + Y FTT LG + + D PG++ Sbjct: 173 ICGCPNVGKSSFMNKVTRADVDVQPYAFTTKSLFLGHTDYKCLRYQVIDTPGLL 226 >gi|291526082|emb|CBK91669.1| GTP-binding protein HflX [Eubacterium rectale DSM 17629] Length = 415 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 4/100 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + I+G NAGKST L +T A D F TL P I+ +G ++ +L D G I+ Sbjct: 204 VAIVGYTNAGKSTLLNHLTEADVLEEDKLFATLDPTTRILALDGKQQVLLTDTVGFIRKL 263 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL 259 H L+ + ++ H+V A N+Q Q + Sbjct: 264 PHHLIEAFKSTLEEAKYADIIFHVVDA--SNMQREKQMFI 301 >gi|253732220|ref|ZP_04866385.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253724009|gb|EES92738.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 299 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 14/139 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G++ + I D PGI K Sbjct: 9 VSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++ +V+A EE + + I++ L + + + Sbjct: 69 HK---LGDYMMKVAKNTLSEIDAIMFMVNANEE-IGRGDEYIIEMLKNVKTPV-----FL 119 Query: 277 GLSQIDTVDSDTLARKKNE 295 L++ID V D L K E Sbjct: 120 VLNKIDLVHPDELMPKIEE 138 >gi|311739636|ref|ZP_07713471.1| GTP-binding protein HflX [Corynebacterium pseudogenitalium ATCC 33035] gi|311305452|gb|EFQ81520.1| GTP-binding protein HflX [Corynebacterium pseudogenitalium ATCC 33035] Length = 497 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 17/169 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 IA I I G NAGKS+ + ++T A + D F TL P + +G ++ + D G Sbjct: 268 IAQIAIAGYTNAGKSSLINAMTGAGVLVEDALFATLDPTTRRATLADG-RQVVFTDTVGF 326 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSEL 269 ++ H + + F L+ ++LH+V + + ++A Q I D +S + Sbjct: 327 VR--HLPTQLVEAFKSTLEEVLAADIMLHVVDGSDPFPLKQIEAVNQVIYDIVSETGEQ- 383 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 EI+ +++ID D LA ++ L + V + S+ TG GI ++ Sbjct: 384 -APPEIIVINKIDQADPLVLAELRHVLDHE--DVVY-VSARTGEGIDEL 428 >gi|187931573|ref|YP_001891557.1| GTP-binding protein Era [Francisella tularensis subsp. mediasiatica FSC147] gi|187712482|gb|ACD30779.1| GTP-binding protein Era [Francisella tularensis subsp. mediasiatica FSC147] Length = 297 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I IIG PN GKST L ++ + K I P TT + GI G +FI D PGI Sbjct: 7 ISIIGRPNVGKSTLLNNILKYKVSITSRKPQTTRHQITGIKTLGDTQFIYVDTPGI 62 >gi|329733159|gb|EGG69496.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus 21193] Length = 299 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 14/142 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G++ + I D PGI K Sbjct: 9 VSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++ +V+A EE + + I++ L + + + Sbjct: 69 HK---LGDYMMKVAKNTLSEIDAIMFMVNANEE-IGRGDEYIIEMLKNVKTPV-----FL 119 Query: 277 GLSQIDTVDSDTLARKKNELAT 298 L++ID V D L K E + Sbjct: 120 VLNKIDLVHPDELMPKIEEYQS 141 >gi|330840435|ref|XP_003292221.1| hypothetical protein DICPUDRAFT_57799 [Dictyostelium purpureum] gi|325077538|gb|EGC31243.1| hypothetical protein DICPUDRAFT_57799 [Dictyostelium purpureum] Length = 670 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + G PN GKS+F+ +TRA + Y FTT +G Y + + D PGI+ Sbjct: 173 LTGYPNVGKSSFMNKLTRANVDVQPYAFTTKSLFVGHTDFKYNSWQVIDTPGIL 226 >gi|297202839|ref|ZP_06920236.1| GTP-binding protein HflX [Streptomyces sviceus ATCC 29083] gi|297148230|gb|EDY61685.2| GTP-binding protein HflX [Streptomyces sviceus ATCC 29083] Length = 498 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 15/173 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I G NAGKS+ L +T A + + F TL P + + + + LAD G + Sbjct: 274 VPSVAIAGYTNAGKSSLLNRLTGAGVLVENALFATLDPTVRRAETPSGRLYTLADTVGFV 333 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKI 273 ++ H ++ + ++LH+V N + AA + ++ ++ A Sbjct: 334 RHLPHHLVEAFRSTMEEVGESDLILHVVDGSHPNPEEQLAAVREVVRDVGATGVP----- 388 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EIV +++ D D TL R + + S+ TG GIP++L + +++ Sbjct: 389 EIVVINKADAADPLTLQR-----LMRIEKRSIAVSARTGQGIPELLALIDNEL 436 >gi|254465678|ref|ZP_05079089.1| GTP-binding protein Era [Rhodobacterales bacterium Y4I] gi|206686586|gb|EDZ47068.1| GTP-binding protein Era [Rhodobacterales bacterium Y4I] Length = 301 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 + +IG PNAGKST L + AK I + T + G+ EG + + D PG+ K Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGDAQLVFVDTPGLFK 65 >gi|23501988|ref|NP_698115.1| GTP-binding protein [Brucella suis 1330] gi|23347938|gb|AAN30030.1| GTP-binding protein, putative [Brucella suis 1330] Length = 472 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 6/170 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L ++ + E IL+D G I N Sbjct: 235 VALVGYTNAGKSTLFNRMTGAQVLAEDMLFATLDPTLRRIRLPHGETVILSDTVGFISNL 294 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ ++LH+ + + A + + + L+ E + +V + Sbjct: 295 PHHLVAAFRATLEEVVEADLILHVRDISDPDNAAQAEDVENILAGLGIEPQDHARVVEVW 354 Query: 279 SQIDTVDSDTLARKKNELA--TQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++I +D A ++ G+ P S+ITG G+ ++L + +I Sbjct: 355 NKIGNLDESAREAALRLAAAGSEEGR-PIPVSAITGEGVDRLLSLIETRI 403 >gi|18977229|ref|NP_578586.1| ferrous iron transport protein b [Pyrococcus furiosus DSM 3638] gi|18892890|gb|AAL80981.1| ferrous iron transport protein b [Pyrococcus furiosus DSM 3638] Length = 663 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 36/59 (61%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GK+T ++T + + ++P T+ GI++ KEF++ D+PGI Sbjct: 1 MLKTVALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGIMEYREKEFLVVDLPGI 59 >gi|56708234|ref|YP_170130.1| GTP-binding protein Era [Francisella tularensis subsp. tularensis SCHU S4] gi|110670705|ref|YP_667262.1| GTP-binding protein Era [Francisella tularensis subsp. tularensis FSC198] gi|134302151|ref|YP_001122120.1| GTP-binding protein Era [Francisella tularensis subsp. tularensis WY96-3418] gi|224457352|ref|ZP_03665825.1| GTP-binding protein Era [Francisella tularensis subsp. tularensis MA00-2987] gi|254370721|ref|ZP_04986726.1| GTP-binding protein [Francisella tularensis subsp. tularensis FSC033] gi|254875055|ref|ZP_05247765.1| GTP-binding protein era [Francisella tularensis subsp. tularensis MA00-2987] gi|56604726|emb|CAG45797.1| GTP-binding protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110321038|emb|CAL09180.1| GTP-binding protein [Francisella tularensis subsp. tularensis FSC198] gi|134049928|gb|ABO46999.1| GTP-binding protein Era [Francisella tularensis subsp. tularensis WY96-3418] gi|151568964|gb|EDN34618.1| GTP-binding protein [Francisella tularensis subsp. tularensis FSC033] gi|254841054|gb|EET19490.1| GTP-binding protein era [Francisella tularensis subsp. tularensis MA00-2987] gi|282159460|gb|ADA78851.1| GTP-binding protein Era [Francisella tularensis subsp. tularensis NE061598] Length = 297 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I IIG PN GKST L ++ + K I P TT + GI G +FI D PGI Sbjct: 7 ISIIGRPNVGKSTLLNNILKYKVSITSRKPQTTRHQITGIKTLGDTQFIYVDTPGI 62 >gi|255325164|ref|ZP_05366270.1| GTP-binding protein HflX [Corynebacterium tuberculostearicum SK141] gi|255297729|gb|EET77040.1| GTP-binding protein HflX [Corynebacterium tuberculostearicum SK141] Length = 497 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 17/169 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 IA I I G NAGKS+ + ++T A + D F TL P + +G ++ + D G Sbjct: 268 IAQIAIAGYTNAGKSSLINAMTGAGVLVEDALFATLDPTTRRATLADG-RQVVFTDTVGF 326 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSEL 269 ++ H + + F L+ ++LH+V + + ++A Q I D +S + Sbjct: 327 VR--HLPTQLVEAFKSTLEEVLAADIMLHVVDGSDPFPLKQIEAVNQVIYDIVSETGEQ- 383 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 EI+ +++ID D LA ++ L + V + S+ TG GI ++ Sbjct: 384 -APPEIIVINKIDQADPLVLAELRHVLDHE--DVVY-VSARTGEGIDEL 428 >gi|5114184|gb|AAD40230.1|AF123492_2 Era [Pseudomonas aeruginosa] Length = 305 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + + D PG+ K+ Sbjct: 17 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGEVQAVYVDTPGLHKSG 76 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 77 EKAL---NRYMNRT 87 >gi|87118473|ref|ZP_01074372.1| GTPase EngA [Marinomonas sp. MED121] gi|86166107|gb|EAQ67373.1| GTPase EngA [Marinomonas sp. MED121] Length = 454 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I I ++G PN GKST +TR++ +ADYP T G + G EFI+ D GI Sbjct: 1 MIPVIALVGRPNVGKSTLFNQLTRSRDALVADYPGLTRDRKYGDGRIGEHEFIVIDTGGI 60 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 11/149 (7%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 IG+IG PN GKST + + + + D P TT KE+ L D G+ + Sbjct: 182 IGVIGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSVYIPYIRNEKEYTLIDTAGVRRRK 241 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H + + LK + +V++ ++ E+ V+ I Y + + + ++ Sbjct: 242 HIKEAVEKFSIVKTLKAIQDANVVIVVIDGHEDLVEQDLHMI-----GYVIDAGRGL-VI 295 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPF 305 +++ D +D + R K E+ + G VP+ Sbjct: 296 AVNKWDGLDQYSKERIKTEVERRLGFVPY 324 >gi|262304257|gb|ACY44721.1| GTP-binding protein [Limnadia lenticularis] Length = 280 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAY 265 + DI G++K A++G G+G+ FL H + H+ E +V+ + D + Sbjct: 35 IVDIAGLVKGANEGQGLGNAFLSHIRGVDAIFHLCRTFESEEITHVEGDVNPVRD-IEII 93 Query: 266 NSELRKKIEIVGLSQIDTVDSDTL 289 N ELR K E L+Q+D ++ L Sbjct: 94 NEELRLKDEEYLLAQLDKLERTVL 117 >gi|262281583|ref|ZP_06059361.1| GTP-binding protein HflX [Acinetobacter calcoaceticus RUH2202] gi|262256959|gb|EEY75699.1| GTP-binding protein HflX [Acinetobacter calcoaceticus RUH2202] Length = 447 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 7/126 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST + ++ AD F TL P L ++ +G +LAD G + Sbjct: 199 IPTVSLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLADTVGFV 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELR--K 271 +N H L+ T +LLH++ + ++ A + +L E+ A LR Sbjct: 259 RNLQHDLVESFKATLEETLEATLLLHVIDSNSHDMLDQIEAVEGVLKEIGADAPVLRVYN 318 Query: 272 KIEIVG 277 KI++ G Sbjct: 319 KIDLSG 324 >gi|167626235|ref|YP_001676735.1| GTP-binding protein Era [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596236|gb|ABZ86234.1| GTP-binding protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 297 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I IIG PN GKST L ++ + K I P TT + GI G +FI D PGI Sbjct: 7 ISIIGRPNVGKSTLLNNILKYKISITSRKPQTTRHQITGIKTLGDTQFIYVDTPGI 62 >gi|166030472|ref|ZP_02233301.1| hypothetical protein DORFOR_00133 [Dorea formicigenerans ATCC 27755] gi|166029724|gb|EDR48481.1| hypothetical protein DORFOR_00133 [Dorea formicigenerans ATCC 27755] Length = 728 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN+GK+T ++T + + ++P T+ G KE KE ++ D+PGI + Sbjct: 5 IALAGNPNSGKTTLFNALTGSNQFVGNWPGVTVEKKEGKWKED-KEVVIMDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R TER +L+IV + LE N+ Q + EL + ++ + Sbjct: 64 YTLEEVVARNYLITERPDAILNIVDGTNLERNLYLTTQLL---------ELGIPV-VMAI 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 + +D V + +LA + G S++ G GI Sbjct: 114 NMMDIVRKNGDEINTKKLAEKLGCEVVTISALKGDGI 150 >gi|254373007|ref|ZP_04988496.1| hypothetical protein FTCG_00580 [Francisella tularensis subsp. novicida GA99-3549] gi|151570734|gb|EDN36388.1| hypothetical protein FTCG_00580 [Francisella novicida GA99-3549] Length = 435 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 2/94 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I +G NAGKST +T A D F TL P L ++ E I +D G I Sbjct: 201 IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSDTVGFI 260 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 KN H L+ + +L+H++ +E+ Sbjct: 261 KNLPHNLVEAFHATLEEAIESDLLVHVIDYADED 294 >gi|118497641|ref|YP_898691.1| protease, GTP-binding subunit [Francisella tularensis subsp. novicida U112] gi|118423547|gb|ABK89937.1| protease, GTP-binding subunit [Francisella novicida U112] Length = 436 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 2/94 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I +G NAGKST +T A D F TL P L ++ E I +D G I Sbjct: 202 IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSDTVGFI 261 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 KN H L+ + +L+H++ +E+ Sbjct: 262 KNLPHNLVEAFHATLEEAIESDLLVHVIDYADED 295 >gi|325294622|ref|YP_004281136.1| GTP-binding proten HflX [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065070|gb|ADY73077.1| GTP-binding proten HflX [Desulfurobacterium thermolithotrophum DSM 11699] Length = 357 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 6/110 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 I ++G N GKST + ++T+ I + PF TL G + K+ +++D G I+N Sbjct: 189 IAVVGYTNVGKSTLVKALTKKDVFIKNIPFATLDVKTGSLYLEDKKVLISDTVGFIRNLP 248 Query: 221 HQGAGIGDRFLKHTERTHVLLHI--VSA--LEENVQAAYQCILDELSAYN 266 H+ L + + +LL + VS+ LEE +++ + +L +L A+N Sbjct: 249 HELIASFKATLGEVKESDILLIVFDVSSKKLEEELKSVKE-VLKKLGAWN 297 >gi|260890127|ref|ZP_05901390.1| hypothetical protein GCWU000323_01289 [Leptotrichia hofstadii F0254] gi|260860150|gb|EEX74650.1| GTP-binding protein Era [Leptotrichia hofstadii F0254] Length = 293 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 2/90 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I+G PN GKST + + + K I +D TT GIV G +FI D PGI K Sbjct: 6 ITIVGRPNVGKSTLMNKLVKEKVAIVSDKAGTTRDQIKGIVNIGESQFIFVDTPGIHKPK 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEE 249 H G + + L+ E +++ ++ +E Sbjct: 66 HLLGEHMTNVALEALENVDLIMFMLDGTQE 95 >gi|260776629|ref|ZP_05885524.1| GTP-binding protein EngA [Vibrio coralliilyticus ATCC BAA-450] gi|260607852|gb|EEX34117.1| GTP-binding protein EngA [Vibrio coralliilyticus ATCC BAA-450] Length = 495 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G K G EFI+ D GI Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 209 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRK 268 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK E +V+L ++ A E + L+A S ++ Sbjct: 269 RINETVEKFSVVKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRS------IVI 322 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D D K EL + G V F S++ G G+ + E + + Sbjct: 323 AVNKWDGLDMDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 374 >gi|259090130|pdb|3A1W|A Chain A, Crystal Structue Of The G Domain Of T. Maritima Feob Iron Iransporter Length = 168 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 23/181 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + + + G PN GK++ ++T K +A++P T+ G+ L D+PG Sbjct: 5 MVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKGYTINLIDLPGTYS 64 Query: 219 NAHQGAGIGDRFLKHTERTHVL-----LHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 + + I ++ R ++L L I+ A N + + +L+ L E+ KK+ Sbjct: 65 LGY--SSIDEKI----ARDYLLKGDADLVILVADSVNPEQSLYLLLEIL-----EMEKKV 113 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILECLHDKIFSIRGE 332 I+ ++ ID + + EL G +P F SS+TG G LE L +KI + Sbjct: 114 -ILAMTAIDEAKKTGMKIDRYELQKHLG-IPVVFTSSVTGEG----LEELKEKIVEYAQK 167 Query: 333 N 333 N Sbjct: 168 N 168 >gi|172040767|ref|YP_001800481.1| bifunctional cytidylate kinase/GTP-binding protein [Corynebacterium urealyticum DSM 7109] gi|171852071|emb|CAQ05047.1| cytidylate kinase [Corynebacterium urealyticum DSM 7109] Length = 784 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 25/177 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKS+ L ++ + + D TT+ P IV+ + + D GI K Sbjct: 525 VALVGRPNVGKSSLLNKISGEQRSVVDNVAGTTVDPVDSIVELEERTWRFVDTAGIRKKV 584 Query: 221 HQGAG----IGDRFLKHTERTHVLLHIVSALE---ENVQAAYQCILDELSAYNSELRKKI 273 G R + + V++ + A E E Q + ILD A Sbjct: 585 KNAVGHEYYASLRTRAAIDASEVVVFLADASEPIAEQDQRVLRMILDAGKAL-------- 636 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPF----EFSSITGHGI----PQILECL 322 +V ++ D VD D + E+ Q VP+ S+ TG + P ++E L Sbjct: 637 -VVAFNKWDLVDEDRRELLEREIDLQLSHVPWARRVNISAKTGRALQKLEPAMMEAL 692 >gi|153813977|ref|ZP_01966645.1| hypothetical protein RUMTOR_00184 [Ruminococcus torques ATCC 27756] gi|317501502|ref|ZP_07959700.1| ferrous iron transporter B [Lachnospiraceae bacterium 8_1_57FAA] gi|331088023|ref|ZP_08336945.1| ferrous iron transporter B [Lachnospiraceae bacterium 3_1_46FAA] gi|145848373|gb|EDK25291.1| hypothetical protein RUMTOR_00184 [Ruminococcus torques ATCC 27756] gi|316897131|gb|EFV19204.1| ferrous iron transporter B [Lachnospiraceae bacterium 8_1_57FAA] gi|330409171|gb|EGG88626.1| ferrous iron transporter B [Lachnospiraceae bacterium 3_1_46FAA] Length = 778 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 14/161 (8%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NAH 221 ++G N GK+T +T A + ++P T+ G++K GYK ++ D+PGI + + Sbjct: 119 ALVGNQNCGKTTLFNQLTGASQHVGNFPGVTVDRKDGVIK-GYKNTLITDLPGIYSMSPY 177 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 I R E+ +++IV A +E N+ Q + EL + +V L+ Sbjct: 178 SSEEIVTREFLLNEKPKGIINIVDATNMERNLYLTMQLM---------ELDMPM-VVALN 227 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 +D + + + NE+ G S+ G GI ++++ Sbjct: 228 MMDELRENGGSVHVNEMEEFLGVPVVPISAAKGEGIEELVK 268 >gi|15605103|ref|NP_219888.1| GTP binding protein [Chlamydia trachomatis D/UW-3/CX] gi|3328804|gb|AAC67975.1| GTP Binding Protein [Chlamydia trachomatis D/UW-3/CX] gi|297748509|gb|ADI51055.1| HflX [Chlamydia trachomatis D-EC] gi|297749389|gb|ADI52067.1| HflX [Chlamydia trachomatis D-LC] Length = 447 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 14/173 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I +IG N+GKST L +T A + + F TL P V + +L D G I Sbjct: 226 IPTFALIGYTNSGKSTLLNLLTSADTYVENKLFATLDPKTRRCVLPCGQRVLLTDTVGFI 285 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKKI 273 + H L+ + +LLH+V A L + IL EL ++ Sbjct: 286 RKLPHTLVAAFKSTLEAALQEDILLHVVDASHPLALEYVETTKAILQELGITQPQV---- 341 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I L+++D V A + ++ P S+ TG GI ++L + D + Sbjct: 342 -ITVLNKMDKVADGVTASRLRLMSPN----PVCVSAKTGEGIRELLRSMEDMV 389 >gi|17231354|ref|NP_487902.1| GTP-binding protein [Nostoc sp. PCC 7120] gi|17132996|dbj|BAB75561.1| GTP-binding protein [Nostoc sp. PCC 7120] Length = 528 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 21/150 (14%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE------FILAD 212 + + ++G NAGKST L ++T A+ AD F TL P + + E ++ D Sbjct: 354 VPSVALVGYTNAGKSTLLNALTNAEVYTADQLFATLDPTTRRLVIPHAETGEPQGILITD 413 Query: 213 IPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVS----ALEENVQAAYQCILDELSAY 265 G I A + D F L+ LLH+V A +++A + IL ++ Sbjct: 414 TVGFIHEL--PASLMDAFRATLEEVTEADALLHLVDLSHPAWLSHIRAVRE-ILAQMPVT 470 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 +V ++ID VDS TLA + E Sbjct: 471 PGP-----ALVAFNKIDQVDSATLALAQEE 495 >gi|118443411|ref|YP_878502.1| ferrous iron transport protein B [Clostridium novyi NT] gi|118133867|gb|ABK60911.1| ferrous iron transport protein B [Clostridium novyi NT] Length = 671 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 19/168 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 ++ I +IG PN GKST ++T +K I ++P T+ G VK + + + D+PG Sbjct: 1 MSTIALIGNPNCGKSTLFNAITGSKQHIGNWPGVTVEKKEGKVKVNNEVYTIIDLPG--- 57 Query: 219 NAHQGAGIGDRFLKH----TERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKK 272 GA D + E+ V++++V A +E N+ Q + E+ Sbjct: 58 TYSLGAYSEDERVARDYILKEKPDVVVNVVDASNIERNLYLTTQLL---------EMGAN 108 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + ++ L+ +D +S + N L+ + ++ G+ ++L+ Sbjct: 109 V-VIALNMMDEAESKNIKIDVNTLSKELKVPVISTVAVKKRGVQELLK 155 >gi|83855026|ref|ZP_00948556.1| GTP-binding protein Era [Sulfitobacter sp. NAS-14.1] gi|83941549|ref|ZP_00954011.1| GTP-binding protein Era [Sulfitobacter sp. EE-36] gi|83842869|gb|EAP82036.1| GTP-binding protein Era [Sulfitobacter sp. NAS-14.1] gi|83847369|gb|EAP85244.1| GTP-binding protein Era [Sulfitobacter sp. EE-36] Length = 302 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 I +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 8 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGESQLVFVDTPGLFQ 65 >gi|319783406|ref|YP_004142882.1| GTP-binding proten HflX [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169294|gb|ADV12832.1| GTP-binding proten HflX [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 463 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 7/159 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + I+G NAGKST +T A D F TL P L V+ + IL+D G I + Sbjct: 233 VAIVGYTNAGKSTLFNRLTGADVLAQDMLFATLDPTLRRVRLPHGTPIILSDTVGFISDL 292 Query: 220 -AHQGAGIGDRFLKHTERTHVL-LHIVSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 H A + E VL L +S + QA + IL +L + ++ IE+ Sbjct: 293 PTHLIAAFRATLEEVVEADLVLHLRDISDPDTAAQAEDVERILADLGVDAGDAKRVIEV- 351 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 ++ID +D R + A P S++TG GI Sbjct: 352 -WNKIDRLDEGNRTRLLADGADANKAPPIAVSAVTGEGI 389 >gi|289191826|ref|YP_003457767.1| small GTP-binding protein [Methanocaldococcus sp. FS406-22] gi|288938276|gb|ADC69031.1| small GTP-binding protein [Methanocaldococcus sp. FS406-22] Length = 345 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 74/174 (42%), Gaps = 28/174 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + I G PN GKST L +T A +I YPFTT N+G + +E + D PG++ Sbjct: 173 VVIAGYPNVGKSTLLKKLTGADVEINSYPFTTKGINVGYM----EEIQMVDTPGLL---- 224 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCI-LDELSAYNSE----LRKKIE-- 274 DR L ER + L + AL I E Y E L K+I+ Sbjct: 225 ------DRPL--YERNDIELQAILALNYLANLILFVIDASEFCGYTIEEQINLLKEIKEL 276 Query: 275 -----IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 +V +++ID VD + + + L + S+ G G+ ++ E L Sbjct: 277 FKVPIVVAINKIDLVDEERIKAIEERLKELGISEILKISADKGIGLDELKESLK 330 >gi|259417698|ref|ZP_05741617.1| GTP-binding protein Era [Silicibacter sp. TrichCH4B] gi|259346604|gb|EEW58418.1| GTP-binding protein Era [Silicibacter sp. TrichCH4B] Length = 301 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 I +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 8 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGESQLVFVDTPGLFQ 65 >gi|257126292|ref|YP_003164406.1| GTP-binding protein Era [Leptotrichia buccalis C-1013-b] gi|257050231|gb|ACV39415.1| GTP-binding protein Era [Leptotrichia buccalis C-1013-b] Length = 293 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 2/90 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I+G PN GKST + + + K I +D TT GIV G +FI D PGI K Sbjct: 6 ITIVGRPNVGKSTLMNKLVKEKVAIVSDKAGTTRDQIKGIVNIGESQFIFVDTPGIHKPK 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEE 249 H G + + L+ E +++ ++ +E Sbjct: 66 HLLGEHMTNVALEALENVDLIMFMLDGTQE 95 >gi|89256163|ref|YP_513525.1| GTP-binding protein Era [Francisella tularensis subsp. holarctica LVS] gi|115314634|ref|YP_763357.1| GTP-binding protein Era [Francisella tularensis subsp. holarctica OSU18] gi|156502202|ref|YP_001428267.1| GTP-binding protein Era [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010561|ref|ZP_02275492.1| GTP-binding protein Era [Francisella tularensis subsp. holarctica FSC200] gi|254367486|ref|ZP_04983512.1| GTP-binding protein [Francisella tularensis subsp. holarctica 257] gi|290954579|ref|ZP_06559200.1| GTP-binding protein Era [Francisella tularensis subsp. holarctica URFT1] gi|295311969|ref|ZP_06802792.1| GTP-binding protein Era [Francisella tularensis subsp. holarctica URFT1] gi|89143994|emb|CAJ79229.1| GTP-binding protein [Francisella tularensis subsp. holarctica LVS] gi|115129533|gb|ABI82720.1| GTP-binding protein [Francisella tularensis subsp. holarctica OSU18] gi|134253302|gb|EBA52396.1| GTP-binding protein [Francisella tularensis subsp. holarctica 257] gi|156252805|gb|ABU61311.1| GTP-binding protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 297 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I IIG PN GKST L ++ + K I P TT + GI G +FI D PGI Sbjct: 7 ISIIGRPNVGKSTLLNNILKYKVSITSRKPQTTRHQITGIKTLGDTQFIYVDTPGI 62 >gi|320353956|ref|YP_004195295.1| ferrous iron transport protein B [Desulfobulbus propionicus DSM 2032] gi|320122458|gb|ADW18004.1| ferrous iron transport protein B [Desulfobulbus propionicus DSM 2032] Length = 786 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 13/131 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 IG++G PN GK+T +T AK ++ ++P T+ G + G+ + D PGI A Sbjct: 6 IGVVGNPNCGKTTLFNCLTGAKQRVGNWPGVTVDRKSGSYRYGHCRVEVIDTPGIYSLAA 65 Query: 222 QGAG--IGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCI---LDELSAYN-----SEL 269 + F+ E ++++IV A +E N+ Q + + L A N +E Sbjct: 66 SSLDEKVTRNFILSRE-ADLIVNIVDASNIERNLYLTCQLLDMRVPMLIALNMMDMVAER 124 Query: 270 RKKIEIVGLSQ 280 + +I+I GL+Q Sbjct: 125 KLEIDIQGLAQ 135 >gi|283770643|ref|ZP_06343535.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus H19] gi|283460790|gb|EFC07880.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus H19] Length = 299 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 14/142 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G++ + I D PGI K Sbjct: 9 VSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++ +V+A EE + + I++ L + + + Sbjct: 69 HK---LGDYMMKVAKNTLSEIDAIMFMVNANEE-IGRGDEYIIEMLKNVKTPV-----FL 119 Query: 277 GLSQIDTVDSDTLARKKNELAT 298 L++ID V D L K E + Sbjct: 120 VLNKIDLVHPDELMPKIEEYQS 141 >gi|254374455|ref|ZP_04989937.1| GTP-binding protein [Francisella novicida GA99-3548] gi|151572175|gb|EDN37829.1| GTP-binding protein [Francisella novicida GA99-3548] gi|332678349|gb|AEE87478.1| GTP-binding protein HflX [Francisella cf. novicida Fx1] Length = 435 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 2/94 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I +G NAGKST +T A D F TL P L ++ E I +D G I Sbjct: 201 IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSDTVGFI 260 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 KN H L+ + +L+H++ +E+ Sbjct: 261 KNLPHNLVEAFHATLEEAIESDLLVHVIDYADED 294 >gi|195380848|ref|XP_002049173.1| GJ21437 [Drosophila virilis] gi|194143970|gb|EDW60366.1| GJ21437 [Drosophila virilis] Length = 382 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 83/201 (41%), Gaps = 42/201 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAK--PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 I +IG+PN GKSTF+ ++ K P A TT N I+ G + + D PG++ Sbjct: 67 IAVIGVPNVGKSTFINNIINHKVCPTSAKV-HTTRKANTAILTTGQTQLVFYDTPGLVTQ 125 Query: 220 AHQGAGIGDRFLKHTERTHVLLH--IVSALEE-----NVQAAYQCILDELSAY------- 265 ++ K R H + H I++ +++ + + +LD L AY Sbjct: 126 NEIRKHHLEQSFKSAYR-HAIQHADIIAVMQDASNSWTRKELHPTVLDTLKAYAQLPSFL 184 Query: 266 --NSELRKKIEIVGLSQIDTVDSDTL----ARKKNELATQCGQVP--------------- 304 N K + V L I T+ +DTL KK +L ++ Q Sbjct: 185 VLNKVDALKSKRVLLDLIKTLTNDTLNGKRPSKKADLPSREEQATAGHPLNKRETSWNHF 244 Query: 305 ---FEFSSITGHGIPQILECL 322 F SSITG G+ ++ + L Sbjct: 245 SDVFLVSSITGSGLQELQDYL 265 >gi|223939697|ref|ZP_03631570.1| GTP-binding proten HflX [bacterium Ellin514] gi|223891654|gb|EEF58142.1| GTP-binding proten HflX [bacterium Ellin514] Length = 414 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 16/173 (9%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN-A 220 I+G NAGKST L +VT A + F TL P ++ + +L D G I+ Sbjct: 194 SIVGYTNAGKSTLLNAVTGADVLAENKLFATLDPTTRRLRLPTNQNVLLTDTVGFIRKLP 253 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV---SALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 H L+ + +L+H+V S E AA +LDE+ A K ++ Sbjct: 254 HNLVEAFKATLEEVVQADLLIHVVDGSSPQAEEQIAAVNAVLDEIGAAG-----KPTMMV 308 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 ++ID + + ++N + + V S+ TG GIP+++ L ++ IR Sbjct: 309 FNKIDKLVNG----ERNFIQSVPNAVA--ISAKTGEGIPELMAELGKQLKPIR 355 >gi|299470109|emb|CBN78138.1| PDE318, predicted plastid-localised Nog1-like GTPase [Ectocarpus siliculosus] Length = 485 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGI 216 + + ++G PN GKS+ + +V+ P++ YPFTT LG + E + + D PG+ Sbjct: 303 LPTVVLVGAPNVGKSSIVRAVSTGTPEVNSYPFTTRGMALGHMFHPETNARYQIMDTPGV 362 Query: 217 I 217 + Sbjct: 363 L 363 >gi|269941057|emb|CBI49441.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus TW20] Length = 299 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 14/142 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G++ + I D PGI K Sbjct: 9 VSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++ +V+A EE + + I++ L + + + Sbjct: 69 HK---LGDYMMKVAKNTLSEIDAIMFMVNANEE-IGRGDEYIIEMLKNVKTPV-----FL 119 Query: 277 GLSQIDTVDSDTLARKKNELAT 298 L++ID V D L K E + Sbjct: 120 VLNKIDLVHPDELMPKIEEYQS 141 >gi|227549102|ref|ZP_03979151.1| HflX family GTP-binding protein [Corynebacterium lipophiloflavum DSM 44291] gi|227078831|gb|EEI16794.1| HflX family GTP-binding protein [Corynebacterium lipophiloflavum DSM 44291] Length = 496 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 11/167 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 I I I G NAGKS+ + ++T A + D F TL P+ + +G + +L D G Sbjct: 268 IPKIAIAGYTNAGKSSLINAMTNAGVLVEDALFATLDPSTRKAQLADG-RNVVLTDTVGF 326 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 ++ H + + F L+ ++LH+V + + + LS E + I Sbjct: 327 VR--HLPTQLVEAFKSTLEEVTGADLMLHVVDGSDAFPLKQIEAVNKVLSDVTRESGESI 384 Query: 274 --EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 EIV +++ID D LA ++ V F S+ TG GI ++ Sbjct: 385 PPEIVVVNKIDQADPVVLAELRHTFDNTGHDVVF-VSAHTGEGIAEL 430 >gi|225569124|ref|ZP_03778149.1| hypothetical protein CLOHYLEM_05204 [Clostridium hylemonae DSM 15053] gi|225161923|gb|EEG74542.1| hypothetical protein CLOHYLEM_05204 [Clostridium hylemonae DSM 15053] Length = 680 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 32/56 (57%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++G IG PN GK+T + T A K+A++P T+ G +EF L D+PGI Sbjct: 6 NVGFIGNPNCGKTTLFNAFTGANLKVANWPGVTVEKKEGRATYKGQEFKLIDLPGI 61 >gi|208779443|ref|ZP_03246789.1| protease, GTP-binding subunit [Francisella novicida FTG] gi|208745243|gb|EDZ91541.1| protease, GTP-binding subunit [Francisella novicida FTG] Length = 435 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 2/94 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I +G NAGKST +T A D F TL P L ++ E I +D G I Sbjct: 201 IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSDTVGFI 260 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 KN H L+ + +L+H++ +E+ Sbjct: 261 KNLPHNLVEAFHATLEEAIESDLLVHVIDYADED 294 >gi|152984162|ref|YP_001350090.1| GTP-binding protein Era [Pseudomonas aeruginosa PA7] gi|150959320|gb|ABR81345.1| GTP-binding protein Era [Pseudomonas aeruginosa PA7] Length = 302 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + + D PG+ K+ Sbjct: 14 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGEVQAVYVDTPGLHKSG 73 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 74 EKAL---NRYMNRT 84 >gi|302912766|ref|XP_003050772.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256731710|gb|EEU45059.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 411 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 196 PNLGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 PN G EG + L D+ G++ AH+G G+G++FL L+H+V A Sbjct: 59 PNYGACVEGRRSVPIELLDVAGLVPGAHEGRGLGNKFLDDLRHADALIHVVDA 111 >gi|222099617|ref|YP_002534185.1| Iron(II) transport protein B [Thermotoga neapolitana DSM 4359] gi|221572007|gb|ACM22819.1| Iron(II) transport protein B [Thermotoga neapolitana DSM 4359] Length = 665 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 25/180 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNA 220 + + G PN GK++ ++T K +A++P T+ G GY+ L D+PG Sbjct: 15 VALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGSFTHRGYR-INLVDLPGTYSLG 73 Query: 221 HQGAGIGDRFLKHTERTHVL-----LHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + + R ++L L +V A N + + +L+ L E+ KK+ I Sbjct: 74 YSSID------EKIARDYILKGDADLVVVVADSVNPEQSLYLLLEIL-----EMEKKV-I 121 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSS-ITGHGIPQILECLHDKIFSIRGENE 334 + L+ ID + + EL G VP F+S +TG GI E L D+I EN+ Sbjct: 122 LVLTAIDEARKLGIKIDRYELQKHLG-VPVVFTSAVTGEGI----EKLKDRIVEYHEEND 176 >gi|195536342|ref|ZP_03079349.1| GTPase of unknown function family protein, putative [Francisella tularensis subsp. novicida FTE] gi|194372819|gb|EDX27530.1| GTPase of unknown function family protein, putative [Francisella tularensis subsp. novicida FTE] Length = 403 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 15/162 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I I +G NAGKST +T A D F TL P L ++ E I +D G I Sbjct: 169 IPTISFVGYTNAGKSTLFNKITNADVLAKDQLFATLDPTLRKVIVPKLGEVIFSDTVGFI 228 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS-----------AY 265 KN H L+ + +L+H++ +E+ ++ + + LS Y Sbjct: 229 KNLPHNLVEAFHATLEEAIESDLLVHVIDYADEDHKSYIEQVEKVLSEIGIADKETICVY 288 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF 307 N K+E + S + DSD+ + L+ Q G EF Sbjct: 289 NK--IDKLENIKPSFVPLEDSDSSVVARVYLSAQNGDGLVEF 328 >gi|144899861|emb|CAM76725.1| GTP-binding protein Era [Magnetospirillum gryphiswaldense MSR-1] Length = 303 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 23/175 (13%) Query: 162 IGIIGLPNAGKSTFL-----ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PNAGKST V+ PK+ TT + LGI+ G + IL D PGI Sbjct: 14 VAIVGAPNAGKSTLTNGLVGTKVSIVSPKVQ----TTRFRVLGILMTGPAQVILVDTPGI 69 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + H ++ ++ + + I+D+L E I+ Sbjct: 70 FQPKRRLDRAMVAAAWHGASDAEIICLMVDAHRGLDDDTRAIIDKLKGAKRE-----AIL 124 Query: 277 GLSQIDTVDSDTL----ARKKNE-LATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L+++D V + L AR E + T F S++ G G+ + + L D++ Sbjct: 125 VLNKVDMVKKERLLDLTARLHEEGIFTDV----FMVSALKGDGLADLSKVLSDRV 175 >gi|75908055|ref|YP_322351.1| GTP-binding protein, HSR1-like [Anabaena variabilis ATCC 29413] gi|75701780|gb|ABA21456.1| GTP-binding protein, HSR1-related protein [Anabaena variabilis ATCC 29413] Length = 528 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 21/150 (14%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE------FILAD 212 + + ++G NAGKST L ++T A+ AD F TL P + + E ++ D Sbjct: 354 VPSVALVGYTNAGKSTLLNALTNAEVYTADQLFATLDPTTRRLVIPHAETGEPQGILITD 413 Query: 213 IPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVS----ALEENVQAAYQCILDELSAY 265 G I A + D F L+ LLH+V A +++A + IL ++ Sbjct: 414 TVGFIHEL--PASLMDAFRATLEEVTEADALLHLVDLSHPAWLSHIRAVRE-ILAQMPVT 470 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNE 295 +V ++ID VDS TLA + E Sbjct: 471 PGP-----ALVAFNKIDQVDSTTLALAQEE 495 >gi|82751170|ref|YP_416911.1| GTP-binding protein Era [Staphylococcus aureus RF122] gi|123547823|sp|Q2YT12|ERA_STAAB RecName: Full=GTPase Era gi|82656701|emb|CAI81128.1| GTP-binding protein [Staphylococcus aureus RF122] Length = 299 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 14/142 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G++ + I D PGI K Sbjct: 9 VSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++ +V+A EE + + I++ L + + + Sbjct: 69 HK---LGDYMMKVAKNTLSEIDAIMFMVNANEE-IGRGDEYIIEMLKNVKTPV-----FL 119 Query: 277 GLSQIDTVDSDTLARKKNELAT 298 L++ID V D L K E + Sbjct: 120 VLNKIDLVHPDELMPKIEEYQS 141 >gi|319790369|ref|YP_004152002.1| GTP-binding proten HflX [Thermovibrio ammonificans HB-1] gi|317114871|gb|ADU97361.1| GTP-binding proten HflX [Thermovibrio ammonificans HB-1] Length = 366 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 1/107 (0%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + ++G N GKST + ++TR + + D PF TL G + + +++D G IKN Sbjct: 191 VAVVGYTNVGKSTLVRALTRKEVFVKDMPFATLDVRTGSLYLNGETVLISDTVGFIKNLP 250 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS 267 H+ L + +LL + A E + + + L S Sbjct: 251 HELVASFRATLSEVKEADLLLVVFDASSETAEEELNSVKEVLKRLRS 297 >gi|15924557|ref|NP_372091.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus Mu50] gi|15927147|ref|NP_374680.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus N315] gi|21283248|ref|NP_646336.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus MW2] gi|49483815|ref|YP_041039.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus MRSA252] gi|49486402|ref|YP_043623.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus MSSA476] gi|57651960|ref|YP_186464.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus COL] gi|87161238|ref|YP_494222.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|148268051|ref|YP_001246994.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus JH9] gi|150394119|ref|YP_001316794.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus JH1] gi|151221682|ref|YP_001332504.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str. Newman] gi|156979885|ref|YP_001442144.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus Mu3] gi|161509795|ref|YP_001575454.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140013|ref|ZP_03564506.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253316042|ref|ZP_04839255.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253733183|ref|ZP_04867348.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus TCH130] gi|255006353|ref|ZP_05144954.2| GTP-binding protein Era [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257425692|ref|ZP_05602116.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 55/2053] gi|257428353|ref|ZP_05604751.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 65-1322] gi|257430990|ref|ZP_05607370.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 68-397] gi|257433678|ref|ZP_05610036.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus E1410] gi|257436592|ref|ZP_05612636.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M876] gi|257793643|ref|ZP_05642622.1| GTP-binding protein Era [Staphylococcus aureus A9781] gi|258411057|ref|ZP_05681337.1| GTP-binding protein Era [Staphylococcus aureus A9763] gi|258420139|ref|ZP_05683094.1| GTP-binding protein Era [Staphylococcus aureus A9719] gi|258423995|ref|ZP_05686877.1| GTP-binding protein Era [Staphylococcus aureus A9635] gi|258437399|ref|ZP_05689383.1| conserved hypothetical protein [Staphylococcus aureus A9299] gi|258443605|ref|ZP_05691944.1| conserved hypothetical protein [Staphylococcus aureus A8115] gi|258446812|ref|ZP_05694966.1| GTP-binding protein Era [Staphylococcus aureus A6300] gi|258448726|ref|ZP_05696838.1| GTP-binding protein Era [Staphylococcus aureus A6224] gi|258450604|ref|ZP_05698666.1| GTP-binding protein Era [Staphylococcus aureus A5948] gi|258453543|ref|ZP_05701521.1| GTP-binding protein Era [Staphylococcus aureus A5937] gi|262051227|ref|ZP_06023451.1| hypothetical protein SA930_1658 [Staphylococcus aureus 930918-3] gi|269203195|ref|YP_003282464.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ED98] gi|282893068|ref|ZP_06301302.1| GTP-binding protein Era [Staphylococcus aureus A8117] gi|282904149|ref|ZP_06312037.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C160] gi|282905976|ref|ZP_06313831.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus Btn1260] gi|282908886|ref|ZP_06316704.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911205|ref|ZP_06319007.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus WBG10049] gi|282914374|ref|ZP_06322160.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M899] gi|282916837|ref|ZP_06324595.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus D139] gi|282919343|ref|ZP_06327078.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C427] gi|282920116|ref|ZP_06327841.1| GTP-binding protein Era [Staphylococcus aureus A9765] gi|282924668|ref|ZP_06332336.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C101] gi|282928200|ref|ZP_06335805.1| GTP-binding protein Era [Staphylococcus aureus A10102] gi|283958331|ref|ZP_06375782.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus A017934/97] gi|293503448|ref|ZP_06667295.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 58-424] gi|293510465|ref|ZP_06669171.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M809] gi|293531005|ref|ZP_06671687.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M1015] gi|294848598|ref|ZP_06789344.1| GTP-binding protein Era [Staphylococcus aureus A9754] gi|295406690|ref|ZP_06816495.1| GTP-binding protein Era [Staphylococcus aureus A8819] gi|295428145|ref|ZP_06820777.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus EMRSA16] gi|296275811|ref|ZP_06858318.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus MR1] gi|297207714|ref|ZP_06924149.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245728|ref|ZP_06929593.1| GTP-binding protein Era [Staphylococcus aureus A8796] gi|297590889|ref|ZP_06949527.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus MN8] gi|300911795|ref|ZP_07129238.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus TCH70] gi|304380844|ref|ZP_07363504.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54037042|sp|P64085|ERA_STAAN RecName: Full=GTPase Era gi|54037043|sp|P64086|ERA_STAAW RecName: Full=GTPase Era gi|54040763|sp|P64084|ERA_STAAM RecName: Full=GTPase Era gi|56748908|sp|Q6G900|ERA_STAAS RecName: Full=GTPase Era gi|56748919|sp|Q6GGD3|ERA_STAAR RecName: Full=GTPase Era gi|81694385|sp|Q5HFJ3|ERA_STAAC RecName: Full=GTPase Era gi|123485633|sp|Q2FGF6|ERA_STAA3 RecName: Full=GTPase Era gi|189037668|sp|A7X2W5|ERA_STAA1 RecName: Full=GTPase Era gi|189037669|sp|A6U239|ERA_STAA2 RecName: Full=GTPase Era gi|189037670|sp|A5IT95|ERA_STAA9 RecName: Full=GTPase Era gi|189037671|sp|A6QHB0|ERA_STAAE RecName: Full=GTPase Era gi|189037672|sp|A8Z4A6|ERA_STAAT RecName: Full=GTPase Era gi|13701365|dbj|BAB42659.1| bex [Staphylococcus aureus subsp. aureus N315] gi|14247338|dbj|BAB57729.1| GTP-binding protein Era homolog [Staphylococcus aureus subsp. aureus Mu50] gi|21204688|dbj|BAB95384.1| bex [Staphylococcus aureus subsp. aureus MW2] gi|49241944|emb|CAG40639.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus MRSA252] gi|49244845|emb|CAG43306.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57286146|gb|AAW38240.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus COL] gi|87127212|gb|ABD21726.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|147741120|gb|ABQ49418.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus JH9] gi|149946571|gb|ABR52507.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus JH1] gi|150374482|dbj|BAF67742.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str. Newman] gi|156722020|dbj|BAF78437.1| GTP-binding protein Era homolog [Staphylococcus aureus subsp. aureus Mu3] gi|160368604|gb|ABX29575.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253728723|gb|EES97452.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus TCH130] gi|257271386|gb|EEV03532.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 55/2053] gi|257275194|gb|EEV06681.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 65-1322] gi|257278420|gb|EEV09056.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 68-397] gi|257281771|gb|EEV11908.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus E1410] gi|257283943|gb|EEV14066.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M876] gi|257787615|gb|EEV25955.1| GTP-binding protein Era [Staphylococcus aureus A9781] gi|257840207|gb|EEV64671.1| GTP-binding protein Era [Staphylococcus aureus A9763] gi|257843850|gb|EEV68244.1| GTP-binding protein Era [Staphylococcus aureus A9719] gi|257845616|gb|EEV69648.1| GTP-binding protein Era [Staphylococcus aureus A9635] gi|257848604|gb|EEV72592.1| conserved hypothetical protein [Staphylococcus aureus A9299] gi|257851011|gb|EEV74954.1| conserved hypothetical protein [Staphylococcus aureus A8115] gi|257854387|gb|EEV77336.1| GTP-binding protein Era [Staphylococcus aureus A6300] gi|257858004|gb|EEV80893.1| GTP-binding protein Era [Staphylococcus aureus A6224] gi|257861762|gb|EEV84561.1| GTP-binding protein Era [Staphylococcus aureus A5948] gi|257864274|gb|EEV87024.1| GTP-binding protein Era [Staphylococcus aureus A5937] gi|259160864|gb|EEW45884.1| hypothetical protein SA930_1658 [Staphylococcus aureus 930918-3] gi|262075485|gb|ACY11458.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ED98] gi|282313503|gb|EFB43898.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C101] gi|282317153|gb|EFB47527.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C427] gi|282319324|gb|EFB49676.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus D139] gi|282321555|gb|EFB51880.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M899] gi|282324900|gb|EFB55210.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus WBG10049] gi|282327150|gb|EFB57445.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331268|gb|EFB60782.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus Btn1260] gi|282590007|gb|EFB95089.1| GTP-binding protein Era [Staphylococcus aureus A10102] gi|282594464|gb|EFB99449.1| GTP-binding protein Era [Staphylococcus aureus A9765] gi|282595767|gb|EFC00731.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C160] gi|282764386|gb|EFC04512.1| GTP-binding protein Era [Staphylococcus aureus A8117] gi|283470845|emb|CAQ50056.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ST398] gi|283790480|gb|EFC29297.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus A017934/97] gi|285817249|gb|ADC37736.1| GTP-binding protein Era [Staphylococcus aureus 04-02981] gi|290920273|gb|EFD97339.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M1015] gi|291095114|gb|EFE25379.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 58-424] gi|291466829|gb|EFF09349.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M809] gi|294824624|gb|EFG41047.1| GTP-binding protein Era [Staphylococcus aureus A9754] gi|294968437|gb|EFG44461.1| GTP-binding protein Era [Staphylococcus aureus A8819] gi|295128503|gb|EFG58137.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus EMRSA16] gi|296887731|gb|EFH26629.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177379|gb|EFH36631.1| GTP-binding protein Era [Staphylococcus aureus A8796] gi|297575775|gb|EFH94491.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus MN8] gi|298694849|gb|ADI98071.1| GTP-binding protein [Staphylococcus aureus subsp. aureus ED133] gi|300886041|gb|EFK81243.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus TCH70] gi|302333243|gb|ADL23436.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus JKD6159] gi|304340571|gb|EFM06505.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312437964|gb|ADQ77035.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus TCH60] gi|312829955|emb|CBX34797.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129845|gb|EFT85835.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS03] gi|315195469|gb|EFU25856.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS00] gi|315198738|gb|EFU29066.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS01] gi|320140548|gb|EFW32402.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus MRSA131] gi|320144085|gb|EFW35854.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus MRSA177] gi|323440465|gb|EGA98177.1| GTP-binding protein Era [Staphylococcus aureus O11] gi|323443239|gb|EGB00857.1| GTP-binding protein Era [Staphylococcus aureus O46] gi|329314243|gb|AEB88656.1| GTP-binding protein era -like protein [Staphylococcus aureus subsp. aureus T0131] gi|329727411|gb|EGG63867.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus 21172] Length = 299 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 14/142 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G++ + I D PGI K Sbjct: 9 VSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++ +V+A EE + + I++ L + + + Sbjct: 69 HK---LGDYMMKVAKNTLSEIDAIMFMVNANEE-IGRGDEYIIEMLKNVKTPV-----FL 119 Query: 277 GLSQIDTVDSDTLARKKNELAT 298 L++ID V D L K E + Sbjct: 120 VLNKIDLVHPDELMPKIEEYQS 141 >gi|308184324|ref|YP_003928457.1| GTP-binding protein Era [Helicobacter pylori SJM180] gi|308060244|gb|ADO02140.1| GTP-binding protein Era [Helicobacter pylori SJM180] Length = 301 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 25/173 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYK-EFILADIPG 215 + +IG PNAGKST L ++ A + + + + KEGY+ + I D PG Sbjct: 8 VALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPG 67 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS--ELRKKI 273 + HQ + L L +S E V A + D+L Y L +K Sbjct: 68 L---HHQEKLLNQCMLSQA------LKAMSDAELCVFLA--SVHDDLKGYEEFLSLCQKP 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECL 322 I+ LS+IDT + +K E Q VP S+ + +LEC+ Sbjct: 117 HILALSKIDTATHKQVLQKLQEYQKYASQFLDLVP--LSAKKSQNLNALLECI 167 >gi|260462322|ref|ZP_05810530.1| GTP-binding protein Era [Mesorhizobium opportunistum WSM2075] gi|259031816|gb|EEW33084.1| GTP-binding protein Era [Mesorhizobium opportunistum WSM2075] Length = 306 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 15/167 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST + + AK I + TT GI + + D PGI K Sbjct: 17 VALIGAPNAGKSTLVNQLVGAKVSIVTHKVQTTRAIVRGIAMHDNAQIVFVDTPGIFKPK 76 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + + + ++L ++ A E ++ IL+ L ++R+ + ++ L+ Sbjct: 77 RRLDTAMVTTAWGGAKDADIVLLLIDA-ERGIRGDADAILERL----KDVRQPMALI-LN 130 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECL 322 ++D V +TL A +VPF+ S++TG G +L+ L Sbjct: 131 KVDRVKHETLLALS---AAANEKVPFKRTFMVSALTGSGCKDLLDYL 174 >gi|195571281|ref|XP_002103632.1| GD18869 [Drosophila simulans] gi|194199559|gb|EDX13135.1| GD18869 [Drosophila simulans] Length = 373 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 79/194 (40%), Gaps = 41/194 (21%) Query: 162 IGIIGLPNAGKSTFLASVT--RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 I +IG+PN GKSTF+ + R P A TT N I G + + D PG++ Sbjct: 62 IAVIGVPNVGKSTFINNTVNHRVCPTSAKV-HTTRQSNTAIYTIGQTQLVFYDTPGLVTQ 120 Query: 220 AHQGAGIGDRFLKHTERTHVLLH--IVSALEENVQA-----AYQCILDELSAYNS----- 267 D+ K R H + H I++ + + A + +LD L AY++ Sbjct: 121 HEIRRHHLDQNFKSAYR-HAIQHADIIAVVHDASNAWTRKELHPTVLDTLKAYSNLPSFL 179 Query: 268 ------ELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP----------------- 304 L+ K ++ L I T+ +DTL K E + V Sbjct: 180 VLNKIDALKSKRLLLDL--IKTLTNDTLTVGKREAQAKSAPVKEIRINKRESSWSHFSDV 237 Query: 305 FEFSSITGHGIPQI 318 F S++TG+G+ ++ Sbjct: 238 FLVSALTGNGLQEM 251 >gi|91773813|ref|YP_566505.1| ferrous iron transport protein B [Methanococcoides burtonii DSM 6242] gi|91712828|gb|ABE52755.1| ferrous iron transport protein B [Methanococcoides burtonii DSM 6242] Length = 658 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 15/125 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I +G P+ GKS F + +T +A+YP TT+ G V G K+ + D+PGI + Sbjct: 26 IAFVGNPSVGKSAFFSRLTGVGVVVANYPGTTVELTHGSVNVGSKKLDVVDLPGIYSLGA 85 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + + + R+L E ++++V A LE N+ Q L +N + +V Sbjct: 86 STEDEKVSKRYLLR-EYPDAIINVVDATRLERNLFLTLQ-----LLEFNIPM-----VVA 134 Query: 278 LSQID 282 L+Q+D Sbjct: 135 LNQMD 139 >gi|15595968|ref|NP_249462.1| GTP-binding protein Era [Pseudomonas aeruginosa PAO1] gi|116048687|ref|YP_792513.1| GTP-binding protein Era [Pseudomonas aeruginosa UCBPP-PA14] gi|218893286|ref|YP_002442155.1| GTP-binding protein Era [Pseudomonas aeruginosa LESB58] gi|254239133|ref|ZP_04932456.1| GTP-binding protein Era [Pseudomonas aeruginosa C3719] gi|254245026|ref|ZP_04938348.1| GTP-binding protein Era [Pseudomonas aeruginosa 2192] gi|296390879|ref|ZP_06880354.1| GTP-binding protein Era [Pseudomonas aeruginosa PAb1] gi|313105593|ref|ZP_07791859.1| GTP-binding protein Era [Pseudomonas aeruginosa 39016] gi|12230892|sp|Q9XCX8|ERA_PSEAE RecName: Full=GTPase Era gi|122257793|sp|Q02HS3|ERA_PSEAB RecName: Full=GTPase Era gi|226741226|sp|B7UYX1|ERA_PSEA8 RecName: Full=GTPase Era gi|9946660|gb|AAG04160.1|AE004512_3 GTP-binding protein Era [Pseudomonas aeruginosa PAO1] gi|115583908|gb|ABJ09923.1| GTP-binding protein Era [Pseudomonas aeruginosa UCBPP-PA14] gi|126171064|gb|EAZ56575.1| GTP-binding protein Era [Pseudomonas aeruginosa C3719] gi|126198404|gb|EAZ62467.1| GTP-binding protein Era [Pseudomonas aeruginosa 2192] gi|218773514|emb|CAW29326.1| GTP-binding protein Era [Pseudomonas aeruginosa LESB58] gi|310878361|gb|EFQ36955.1| GTP-binding protein Era [Pseudomonas aeruginosa 39016] Length = 305 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + + D PG+ K+ Sbjct: 17 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGEVQAVYVDTPGLHKSG 76 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 77 EKAL---NRYMNRT 87 >gi|148256031|ref|YP_001240616.1| GTP-binding protein Era [Bradyrhizobium sp. BTAi1] gi|189037293|sp|A5EKL6|ERA_BRASB RecName: Full=GTPase Era gi|146408204|gb|ABQ36710.1| GTP-binding protein (era) [Bradyrhizobium sp. BTAi1] Length = 308 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 35/177 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGI---- 216 + +IG PN GKST + ++ +K I T + GIV EG + IL D PGI Sbjct: 18 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGTSQIILVDTPGIFSPK 77 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 + A GA D VLL L++ QA I+D+ +A + Sbjct: 78 RRLDRAMVTTAWSGAHDADLVC-------VLLDAKKGLDDEAQA----IIDKAAAVAHQ- 125 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECL 322 +I+ ++++D V + L +A ++PF S+++G G+ + + L Sbjct: 126 ----KILVVNKVDLVPREKLL---ALVAAANEKLPFARTFMISALSGDGVDDLKQAL 175 >gi|107100232|ref|ZP_01364150.1| hypothetical protein PaerPA_01001255 [Pseudomonas aeruginosa PACS2] Length = 302 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + + D PG+ K+ Sbjct: 14 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGEVQAVYVDTPGLHKSG 73 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 74 EKAL---NRYMNRT 84 >gi|83316069|ref|XP_731065.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23490987|gb|EAA22630.1| Unknown-related [Plasmodium yoelii yoelii] Length = 685 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 11/165 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ V+RA ++ Y FTT +G + + D PG++ + Sbjct: 174 ILLAGAPNVGKSSFINYVSRANVEVQPYSFTTKNLYVGHFDHNLNRYQIIDTPGLLDRSL 233 Query: 222 QGAGIGDRFLKHTERTH---VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + T H V+L I+ EE + I + L + S K ++GL Sbjct: 234 ENRNTIE-MTTITALAHINGVILFIIDISEECGMTIKEQI-NLLYSIKSLFSNKSIVIGL 291 Query: 279 SQIDTVDSDTLARKKNELATQC-----GQVPF-EFSSITGHGIPQ 317 ++ID D ++ + L + V F FS++TG G+ + Sbjct: 292 NKIDKGSLDNVSVENKLLIKKIVDDIKKTVKFCSFSTLTGVGVEE 336 >gi|301632619|ref|XP_002945379.1| PREDICTED: hypothetical protein LOC100487340 [Xenopus (Silurana) tropicalis] Length = 937 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 31/189 (16%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFILADIPGIIK 218 +I ++G NAGKST ++ +A+ AD F TL +++ + L+D G I+ Sbjct: 748 NISLVGYTNAGKSTLFNALVKARAYAADQLFATLDTTTRQLYLQDAGRSVSLSDTVGFIR 807 Query: 219 NAHQGAGIGDRF---LKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRK 271 + G+ D F L+ +LLH+V A E +Q + D Sbjct: 808 DLPH--GLVDAFQATLQEAVDADLLLHVVDAANPHFPEQIQQVQTVLAD----------- 854 Query: 272 KIEIVGLSQIDTVDS-DTLARKKNELATQCG------QVPFEF-SSITGHGIPQILECLH 323 I+ V + Q+ + D LA ++ L Q VP F S+ TG G+ + + L Sbjct: 855 -IDAVDIPQLLVFNKLDALAPEQRSLQLQDSYEMDGRPVPRVFLSARTGEGLQALRQQLA 913 Query: 324 DKIFSIRGE 332 + + RG+ Sbjct: 914 ATVIAGRGQ 922 Score = 35.8 bits (81), Expect = 9.1, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST +TR++ I AD+ T + G ++G +I+ D G +A Sbjct: 12 IALVGRPNVGKSTLFNRLTRSRDAIVADFAGLTRDRHYGNGRQGKHAYIVIDTGGFEPDA 71 Query: 221 HQGAGIGDRFLKHTER----THVLLHIVSA 246 +GI K T + + V+L +V A Sbjct: 72 --SSGIFREMAKQTRQAVAESDVVLFVVDA 99 >gi|262379008|ref|ZP_06072165.1| GTP-binding protein HflX [Acinetobacter radioresistens SH164] gi|262300293|gb|EEY88205.1| GTP-binding protein HflX [Acinetobacter radioresistens SH164] Length = 446 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 7/126 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST + + A+ F TL P L ++ +G +LAD G + Sbjct: 198 IPTVSLVGYTNAGKSTLFNILANTEVYAANQLFATLDPTLRRLEWDGIGSLVLADTVGFV 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELR--K 271 +N H L+ T +LLH++ + ++ A + +L E+ A LR Sbjct: 258 RNLPHSLVESFKATLEETLEATLLLHVIDSSTPDMMEQIDAVESVLKEIGADVPVLRVYN 317 Query: 272 KIEIVG 277 KI++ G Sbjct: 318 KIDVSG 323 >gi|258406403|ref|YP_003199145.1| GTP-binding proten HflX [Desulfohalobium retbaense DSM 5692] gi|257798630|gb|ACV69567.1| GTP-binding proten HflX [Desulfohalobium retbaense DSM 5692] Length = 549 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 16/141 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + ++G NAGKST L ++T ++ D F TL P ++ +E +L D G I+ Sbjct: 388 VALVGYTNAGKSTLLNTITHSQVVAEDKLFATLDPTSRRIRFPQDREVVLTDTVGFIREL 447 Query: 221 HQGAGIGDRF---LKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKI 273 + + + F L+ E VL+ + A LEE V AA IL ++ L Sbjct: 448 PE--DLREAFLATLEELEEADVLIQVADAGHPELEEQV-AAVDAILQDMG-----LEDIP 499 Query: 274 EIVGLSQIDTVDSDTLARKKN 294 ++ L++ DT++ + R N Sbjct: 500 RLLALNKWDTLEPEARQRVLN 520 >gi|46580975|ref|YP_011783.1| ferrous iron transport protein B [Desulfovibrio vulgaris str. Hildenborough] gi|120601725|ref|YP_966125.1| ferrous iron transport protein B [Desulfovibrio vulgaris DP4] gi|46450395|gb|AAS97043.1| ferrous iron transport protein B [Desulfovibrio vulgaris str. Hildenborough] gi|120561954|gb|ABM27698.1| ferrous iron transport protein B [Desulfovibrio vulgaris DP4] gi|311234663|gb|ADP87517.1| ferrous iron transport protein B [Desulfovibrio vulgaris RCH1] Length = 732 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 13/161 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 + + G PN+GK+T T A+ + +YP T+ G + ++ + D+PG A Sbjct: 7 VALAGNPNSGKTTAFNEYTGARQHVGNYPGITVEKKEGYARLDGRDIHIVDLPGTYSLTA 66 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVS--ALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R + +R V++ +V+ ALE N+ A Q + E+ + I GL Sbjct: 67 YTQEEVVARSVLADDRPDVVIDVVNAGALERNLYLAVQIM---------EMGAPVAI-GL 116 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 + +D L LA G E + TG G+ ++L Sbjct: 117 NMMDEARKQGLRIDAERLAGLLGVPVVETVARTGEGLQELL 157 >gi|322701168|gb|EFY92919.1| GTP-binding protein [Metarhizium acridum CQMa 102] Length = 399 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 196 PNLGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 PN G +G + L D+ G++ AHQG G+G++FL L+H+V A Sbjct: 47 PNYGACVDGRRSVPIELLDVAGLVPGAHQGRGLGNKFLDDLRHADALIHVVDA 99 >gi|261252182|ref|ZP_05944755.1| GTP-binding protein EngA [Vibrio orientalis CIP 102891] gi|260935573|gb|EEX91562.1| GTP-binding protein EngA [Vibrio orientalis CIP 102891] Length = 495 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G K G EFI+ D GI Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 209 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRK 268 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK E +V+L ++ A E + L+A S ++ Sbjct: 269 RINETVEKFSVVKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRS------IVL 322 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D+D K EL + G V F S++ G G+ + E + + Sbjct: 323 AVNKWDGLDTDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 374 >gi|241668676|ref|ZP_04756254.1| GTP-binding protein Era [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877209|ref|ZP_05249919.1| GTP-binding protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843230|gb|EET21644.1| GTP-binding protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 297 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I IIG PN GKST L ++ + K I P TT + GI G +FI D PGI Sbjct: 7 ISIIGRPNVGKSTLLNNILKYKISITSRKPQTTRHQITGIKTLGDTQFIYVDTPGI 62 >gi|229026290|ref|ZP_04182649.1| Ferrous iron transport protein B [Bacillus cereus AH1272] gi|228735006|gb|EEL85642.1| Ferrous iron transport protein B [Bacillus cereus AH1272] Length = 657 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 17/166 (10%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAH 221 ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 1 MLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--KQGTLIDLPGVYDLNPVS 58 Query: 222 QGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + G+ FL T+ H +L+IV S E N+ Q + E K + I GL+ Sbjct: 59 RDEGVVTNFL-LTDEFHHMLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-GLN 107 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDK 325 +D + L+ G + TG G ++L LH++ Sbjct: 108 MVDVAKQRGIVINVKRLSEILGVTVVPVIARTGKGCEELLTTLHEE 153 >gi|218887037|ref|YP_002436358.1| GTP-binding proten HflX [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757991|gb|ACL08890.1| GTP-binding proten HflX [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 655 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 12/132 (9%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNAH 221 ++G NAGKST L ++T + + F TL P ++ + +E ILAD G I+N Sbjct: 435 SLVGYTNAGKSTLLNALTNSAVLAENKLFATLDPTTRRLRFPHERELILADTVGFIRNLP 494 Query: 222 QGAGIGDR-FLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKIEIV 276 + R L+ E +L+H+ A L+ + A + D EL + ++ Sbjct: 495 KELLEAFRATLEELEAADLLIHVADAGHPELDRQLGAVDTILTD------MELHEVPRLL 548 Query: 277 GLSQIDTVDSDT 288 L++ DT+D +T Sbjct: 549 VLNKWDTLDEET 560 >gi|167587057|ref|ZP_02379445.1| GTP-binding proten HflX [Burkholderia ubonensis Bu] Length = 387 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 193 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEIGQIVVSDTVGFIRE 252 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 253 LPHQLVAAFRATLEETIHADLLLHVVDA 280 >gi|261252365|ref|ZP_05944938.1| ferrous iron transport protein B [Vibrio orientalis CIP 102891] gi|260935756|gb|EEX91745.1| ferrous iron transport protein B [Vibrio orientalis CIP 102891] Length = 758 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 17/136 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I +G PN+GK+T +T AK ++ ++ T+ G +F+L D+PGI + + Sbjct: 5 ILTVGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGKYTHSSDDFLLTDLPGIYALDS 64 Query: 220 AHQGAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQ---------CILDELSAY 265 + G I + TH +++++V A LE ++ Q +L+++ A Sbjct: 65 GNDGNSIDESIASRAVLTHPADLIINVVDATCLERSLYMTLQLRELGRPMVVVLNKMDAL 124 Query: 266 NSELRKKIEIVGLSQI 281 E R+ I++ L ++ Sbjct: 125 KRE-RQTIDLKALEKV 139 >gi|259090125|pdb|3A1T|A Chain A, Crystal Structue Of The Cytosolic Domain Of T. Maritima Feob Iron Iransporter In Gdp Form Ii gi|259090126|pdb|3A1U|A Chain A, Crystal Structue Of The Cytosolic Domain Of T. Maritima Feob Iron Iransporter In Gmppnp Form gi|259090127|pdb|3A1U|B Chain B, Crystal Structue Of The Cytosolic Domain Of T. Maritima Feob Iron Iransporter In Gmppnp Form gi|259090128|pdb|3A1V|A Chain A, Crystal Structue Of The Cytosolic Domain Of T. Maritima Feob Iron Iransporter In Apo Form gi|259090129|pdb|3A1V|B Chain B, Crystal Structue Of The Cytosolic Domain Of T. Maritima Feob Iron Iransporter In Apo Form Length = 258 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 27/183 (14%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI--LADIPGI 216 + + + G PN GK++ ++T K +A++P T+ G+ YK + L D+PG Sbjct: 5 MVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVF--TYKGYTINLIDLPGT 62 Query: 217 IKNAHQGAGIGDRFLKHTERTHVL-----LHIVSALEENVQAAYQCILDELSAYNSELRK 271 + + I ++ R ++L L I+ A N + + +L+ L E+ K Sbjct: 63 YSLGY--SSIDEKI----ARDYLLKGDADLVILVADSVNPEQSLYLLLEIL-----EMEK 111 Query: 272 KIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILECLHDKIFSIR 330 K+ I+ ++ ID + + EL G +P F SS+TG G LE L +KI Sbjct: 112 KV-ILAMTAIDEAKKTGMKIDRYELQKHLG-IPVVFTSSVTGEG----LEELKEKIVEYA 165 Query: 331 GEN 333 +N Sbjct: 166 QKN 168 >gi|240949663|ref|ZP_04753998.1| GTP-binding protein EngA [Actinobacillus minor NM305] gi|240295921|gb|EER46597.1| GTP-binding protein EngA [Actinobacillus minor NM305] Length = 510 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 13/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G G +FI+ D G I + Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHANIGGYDFIVIDTGG-IDGS 63 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A + A D A R+K +V Sbjct: 64 EEGVEEKMAEQSLLAIEEADVVLFLVDARAGLLPA------DVGIAQYLRQREKTTVVVA 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G+V + ++ G G+ Q++E Sbjct: 118 NKTDGIDADSHCAEFYQLG--LGEVE-QIAAAQGRGVTQLIE 156 >gi|118587960|ref|ZP_01545370.1| GTP-binding protein Era [Stappia aggregata IAM 12614] gi|118439582|gb|EAV46213.1| GTP-binding protein Era [Stappia aggregata IAM 12614] Length = 335 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I +IG PNAGKST + + K I + TT G+ G + + D PGI K Sbjct: 46 IALIGAPNAGKSTLINQLVGTKVSIVTHKVQTTRTIVRGVAMHGAAQLVFIDTPGIFKPK 105 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + DR + T R L+ ++ + + + IL LS+ + +++ Sbjct: 106 RR----LDRAMVDTAWGGARDADLIALLVDARKGLTEEVENILKRLSSQQAP-----KVL 156 Query: 277 GLSQIDTVDSDT---LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L++ D + LA+K NE + F S++TG G IL+ K+ Sbjct: 157 ILNKTDVAKREKLLQLAQKINEFVR--FEETFMVSALTGDGTQTILDYFASKV 207 >gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana] Length = 1184 Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 17/140 (12%) Query: 147 GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK 206 G++K + L+ + I ++G NAGKST ++++T+ + F TL P L Sbjct: 897 GRKKRVGLEGESSGTIAVVGYTNAGKSTLISALTKTALYCNERLFATLDPTLKSAHLPSG 956 Query: 207 EFIL--------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC- 257 F+L +D+P + A Q L+ +LLH+V + N++ Sbjct: 957 NFVLLSDTVGFISDLPIQLVKAFQST------LEEVVEADLLLHVVDSTAPNIEEHRSTV 1010 Query: 258 --ILDELSAYNSELRKKIEI 275 +L+++ +L+ IE+ Sbjct: 1011 LHVLNQIGVPEEKLQNMIEV 1030 >gi|183983654|ref|YP_001851945.1| GTP-binding protein Era [Mycobacterium marinum M] gi|183176980|gb|ACC42090.1| GTP-binding protein Era [Mycobacterium marinum M] Length = 300 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 39/166 (23%), Positives = 81/166 (48%), Gaps = 10/166 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 + ++G PN GKST ++ K I P TT + GIV + IL D PG+ + Sbjct: 10 VCLVGRPNTGKSTLTNALVGTKVAITSMRPQTTRHTIRGIVHRESFQIILVDTPGLHRPR 69 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 G + D ++ T ++ + +E++ + I+++++A +++ +V ++ Sbjct: 70 TLLGKRLND-LVRDTYSEVDVIGLCIPADESIGPGDRWIIEQIAATAPKVKL---VVIVT 125 Query: 280 QIDTVDSDTLARK---KNELATQCGQVPFEFSSITGHGIPQILECL 322 +ID V D +A + +EL T ++ S++TG + +++ L Sbjct: 126 KIDKVPKDQVAAQLVAVSELVTNSAEI-VPVSAVTGAQVEVLIDVL 170 >gi|254248076|ref|ZP_04941397.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184] gi|124872852|gb|EAY64568.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184] Length = 390 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 193 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 252 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 253 LPHQLVAAFRATLEETIHADLLLHVVDA 280 >gi|118581300|ref|YP_902550.1| small GTP-binding protein [Pelobacter propionicus DSM 2379] gi|118504010|gb|ABL00493.1| small GTP-binding protein [Pelobacter propionicus DSM 2379] Length = 580 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 17/151 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNA 220 + I+G NAGKST L ++T+++ D F TL + ++ +E I+ D G I++ Sbjct: 404 VSIVGYTNAGKSTLLNTLTKSRVFTEDLLFATLDTSTRRLRFPLEREVIITDTVGFIRSL 463 Query: 221 HQG-AGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKIEI 275 G L+ +LLH+V A E ++Q + ILDEL EL K + Sbjct: 464 PASLLGAFKATLEELRDADLLLHVVDASNPRFETHIQQVNR-ILDEL-----ELGDKPRL 517 Query: 276 VGLSQIDTV----DSDTLA-RKKNELATQCG 301 + ++ D + SDT+A + + A CG Sbjct: 518 LIFNKSDLLAKLKKSDTIAFLRVRQFARTCG 548 >gi|332678448|gb|AEE87577.1| GTP-binding protein Era [Francisella cf. novicida Fx1] Length = 297 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I IIG PN GKST L ++ + K I P TT + GI G +FI D PGI Sbjct: 7 ISIIGRPNVGKSTLLNNILKYKVSITSRKPQTTRHQITGIKTLGGTQFIYVDTPGI 62 >gi|329894312|ref|ZP_08270182.1| GTP-binding protein Era [gamma proteobacterium IMCC3088] gi|328923108|gb|EGG30431.1| GTP-binding protein Era [gamma proteobacterium IMCC3088] Length = 300 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIP 214 +K A + I+G PN GKST L + K I P TT + LGI EG + + D P Sbjct: 5 IKKSAIVAIVGRPNVGKSTLLNHILGQKISITSRKPQTTRHTLLGIHTEGDFQLVFVDTP 64 Query: 215 GI 216 GI Sbjct: 65 GI 66 >gi|255319634|ref|ZP_05360844.1| GTP-binding protein HflX [Acinetobacter radioresistens SK82] gi|255303318|gb|EET82525.1| GTP-binding protein HflX [Acinetobacter radioresistens SK82] Length = 446 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 7/126 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST + + A+ F TL P L ++ +G +LAD G + Sbjct: 198 IPTVSLVGYTNAGKSTLFNILANTEVYAANQLFATLDPTLRRLEWDGIGSLVLADTVGFV 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELR--K 271 +N H L+ T +LLH++ + ++ A + +L E+ A LR Sbjct: 258 RNLPHSLVESFKATLEETLEATLLLHVIDSSTPDMMEQIDAVESVLKEIGADVPVLRVYN 317 Query: 272 KIEIVG 277 KI++ G Sbjct: 318 KIDVSG 323 >gi|298346688|ref|YP_003719375.1| GTP-binding proten HflX [Mobiluncus curtisii ATCC 43063] gi|298236749|gb|ADI67881.1| GTP-binding proten HflX [Mobiluncus curtisii ATCC 43063] Length = 524 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 18/175 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 I + I+G NAGKS+ L + A + D F TL P++ EG +E+ LAD G Sbjct: 287 IPAVAIVGYTNAGKSSLLNRLAGANLLVHDALFATLDPSVRRAHTPEG-REYTLADTVGF 345 Query: 217 IKNAHQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE- 274 ++ R L+ T ++LH+V + A + L EL + IE Sbjct: 346 VRRLPTELVEAFRSTLEETAMADLILHVVDGSNPDPMAQVAAVDATL-----ELVEGIEE 400 Query: 275 ---IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID + LA ++ L + S+ TG GI + + + D++ Sbjct: 401 IPVMMVVNKIDQASAPALALLRHSLPEA-----YYVSARTGEGIEALQQSIADRL 450 >gi|13160991|gb|AAK13445.1|AF325354_1 G protein-binding protein CRFG [Mus musculus] Length = 634 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 5/94 (5%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VTRA + Y FTT +G + Y + + PGI+ + Sbjct: 173 LCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVTYPGILDHP--- 229 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 + DR + L H+ +A+ + + QC Sbjct: 230 --LEDRNTIEMQAITALAHLRAAVLYVMDLSEQC 261 >gi|83944969|ref|ZP_00957335.1| tRNA modification GTPase [Oceanicaulis alexandrii HTCC2633] gi|83851751|gb|EAP89606.1| tRNA modification GTPase [Oceanicaulis alexandrii HTCC2633] Length = 443 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 22/160 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKN 219 I +IG PNAGKST L ++ R I D P TT + +V G+ I+AD G+ Sbjct: 218 IALIGEPNAGKSTLLNALARRDAAIVTDIPGTTRDVVEVRLVLAGFP-VIVADTAGLRDA 276 Query: 220 AHQGAGIG-DRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A Q G R L + + L +V E + A +L+ L+ ++ + K++ Sbjct: 277 ADQVEAEGVRRALDRAQNADLRLGVVDVSRETLPAK---LLETLTDADALILNKMD---- 329 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 TL L+ + G FE S+ +G G+P + Sbjct: 330 ------QGQTL-----HLSDELGMTRFELSAKSGLGLPAL 358 >gi|145633562|ref|ZP_01789290.1| GTP-binding protein EngA [Haemophilus influenzae 3655] gi|144985768|gb|EDJ92382.1| GTP-binding protein EngA [Haemophilus influenzae 3655] Length = 504 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FIL D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHIAGYDFILIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L + ++L +V A +A ++ Y + + KI +V Sbjct: 65 EEGVEEKMAEQSLLAIDEADIVLFLVDA-----RAGLTAADIGIANYLRQRQNKITVVVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G++ + ++ G G+ Q++E Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGEIE-QIAASQGRGVTQLME 158 >gi|114799800|ref|YP_759605.1| GTP-binding protein Era [Hyphomonas neptunium ATCC 15444] gi|114739974|gb|ABI78099.1| GTP-binding protein Era [Hyphomonas neptunium ATCC 15444] Length = 315 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI 216 +IG PNAGKST + AK I + TT +P G+ + G + ++ D PGI Sbjct: 13 AVIGAPNAGKSTLTNRLVGAKVAIVTHKVQTTRFPVRGVAQVGDAQIVIVDTPGI 67 >gi|89898550|ref|YP_515660.1| GTP-binding protein [Chlamydophila felis Fe/C-56] gi|89331922|dbj|BAE81515.1| GTP-binding protein [Chlamydophila felis Fe/C-56] Length = 452 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 16/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 I +IG N+GKST L +T A+ D F TL P ++ G + + + I Sbjct: 227 IPSFALIGYTNSGKSTLLNLLTSAETYAEDKLFATLDPKTRRCVLPCGQRVLVTDTVGFI 286 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 K H L+ VLLH+V A E+V+ + IL +L + ++ Sbjct: 287 RKLPHALVAAFKSTLEAALHEDVLLHVVDASHPLAFEHVETT-KGILQDLGIEHPKI--- 342 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I L++ID + + K L+ + V S+ TG GIP +LE + + I Sbjct: 343 --ITVLNKIDELPEGKVPAKLRLLSPRAVLV----SAKTGEGIPNLLEAMTEVI 390 >gi|242242840|ref|ZP_04797285.1| GTP-binding protein Era [Staphylococcus epidermidis W23144] gi|242233703|gb|EES36015.1| GTP-binding protein Era [Staphylococcus epidermidis W23144] Length = 208 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 6/132 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G++ + I D PGI K Sbjct: 9 VSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H+ R K+T + + + E++ + I++ L + + + L++ Sbjct: 69 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVKTPI-----FLVLNK 123 Query: 281 IDTVDSDTLARK 292 ID V DTL K Sbjct: 124 IDLVHPDTLMPK 135 >gi|229169547|ref|ZP_04297251.1| Ferrous iron transport protein B [Bacillus cereus AH621] gi|228613937|gb|EEK71058.1| Ferrous iron transport protein B [Bacillus cereus AH621] Length = 657 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 17/166 (10%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAH 221 ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 1 MLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--KQGTLIDLPGVYDLNPVS 58 Query: 222 QGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + G+ FL T+ H +L+IV S E N+ Q + E K + I GL+ Sbjct: 59 RDEGVVTNFL-LTDEFHHMLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-GLN 107 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDK 325 +D + L+ G + TG G ++L LH++ Sbjct: 108 MVDVAKQRGIVINVKRLSEILGVTVVPVIARTGKGCEELLTTLHEE 153 >gi|260776443|ref|ZP_05885338.1| ferrous iron transport protein B [Vibrio coralliilyticus ATCC BAA-450] gi|260607666|gb|EEX33931.1| ferrous iron transport protein B [Vibrio coralliilyticus ATCC BAA-450] Length = 758 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 17/136 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I +G PN+GK+T +T AK ++ ++ T+ G EF+L D+PGI + + Sbjct: 5 ILTVGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGRYSHSGDEFMLTDLPGIYALDS 64 Query: 220 AHQGAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQ---------CILDELSAY 265 + G I + TH +++++V A LE ++ Q +L+++ A Sbjct: 65 GNDGNSIDESIASRAVLTHPADLIINVVDATCLERSLYMTLQLRELGRPMMVVLNKMDAL 124 Query: 266 NSELRKKIEIVGLSQI 281 E R+ I++ L ++ Sbjct: 125 KRE-RQTIDVKALEKM 139 >gi|157814210|gb|ABV81850.1| putative GTP-binding protein [Cypridopsis vidua] Length = 279 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 6/91 (6%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + + ++ A E+ +V+ + D + Sbjct: 35 VVDIAGLVKGASEGQGLGNAFLSHIKACDAIFYMARAFEDEDVTHVEGDVNPVRD-MDII 93 Query: 266 NSELRKKIEIVGLSQIDTVDSDTL-ARKKNE 295 ELRKK E + ++D ++ + L KKN+ Sbjct: 94 MEELRKKDEEFLMKEVDKIEKNVLRGDKKNK 124 >gi|149190086|ref|ZP_01868363.1| GTP-binding protein EngA [Vibrio shilonii AK1] gi|148836116|gb|EDL53076.1| GTP-binding protein EngA [Vibrio shilonii AK1] Length = 494 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G K G EFI+ D GI Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 207 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMQRDDREYVLIDTAGVRRRR 266 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK E +V+L ++ A EN+ +L A NS + ++ Sbjct: 267 RINETVEKFSVVKTLKAVEDANVVLLVIDA-RENISDQDLSLLG--FALNS---GRSIVI 320 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D+D K EL + G V F S++ G G+ + E + + Sbjct: 321 AVNKWDGLDTDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 372 >gi|160902430|ref|YP_001568011.1| ferrous iron transport protein B [Petrotoga mobilis SJ95] gi|160360074|gb|ABX31688.1| ferrous iron transport protein B [Petrotoga mobilis SJ95] Length = 669 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 33/57 (57%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 A+I IIG PN GK++ +T K +A++P T+ +G K K F L D+PG+ Sbjct: 17 AEISIIGNPNVGKTSLFNLLTGTKQYVANWPGVTVEKKVGNFKYKGKTFKLVDLPGV 73 >gi|110678687|ref|YP_681694.1| GTP-binding protein Era [Roseobacter denitrificans OCh 114] gi|109454803|gb|ABG31008.1| GTP-binding protein Era [Roseobacter denitrificans OCh 114] Length = 302 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 7/168 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGDSQIVFVDTPGLFQPR 67 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + + V++ +V A V + +L+ L+ + ++ + ++ Sbjct: 68 RRLDRAMVAAAWSGAADADVVVLLVEA-HRGVTEGVERVLEGLAEVG---QGRMVALAIN 123 Query: 280 QIDTVDSDTLARKKNELATQCGQV-PFEFSSITGHGIPQILECLHDKI 326 +ID V ++ L +L + V F S+ GHG+ + L K+ Sbjct: 124 KIDRVQAEALLALSKDLNERYDFVETFMISAERGHGVDTLRAWLAGKV 171 >gi|52424789|ref|YP_087926.1| GTP-binding protein EngA [Mannheimia succiniciproducens MBEL55E] gi|52306841|gb|AAU37341.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 507 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHANISGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A +A ++ Y + + KI +V Sbjct: 65 EEGVEEKMAEQSLLAIEEADVVLFLVDA-----RAGLTPADIGIAQYLRQRQNKITVVVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G++ + ++ G G+ Q++E Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGEIA-QIAASQGRGVTQLME 158 >gi|33593196|ref|NP_880840.1| putative GTP-binding protein [Bordetella pertussis Tohama I] gi|33563571|emb|CAE42470.1| putative GTP-binding protein [Bordetella pertussis Tohama I] gi|332382607|gb|AEE67454.1| putative GTP-binding protein [Bordetella pertussis CS] Length = 368 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST ++TRA AD F TL I +G +L+D G I++ Sbjct: 192 VSLVGYTNAGKSTLFNAMTRAGAYAADQLFATLDTTTRRIWIDGAGSVVLSDTVGFIRDL 251 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 H L+ T +LLH+V A Sbjct: 252 PHNLIAAFRATLEETVYADLLLHVVDA 278 >gi|238797305|ref|ZP_04640806.1| Ferrous iron transport protein B [Yersinia mollaretii ATCC 43969] gi|238718942|gb|EEQ10757.1| Ferrous iron transport protein B [Yersinia mollaretii ATCC 43969] Length = 771 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 17/164 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 IG+IG PNAGK+T +T A+ ++ ++ T+ G + L D+PG + Sbjct: 6 IGLIGNPNAGKTTLFNQLTGARQRVGNWAGVTVERKEGHFTTAQHQVTLVDLPGTYSLTT 65 Query: 220 AHQGAGIGDRFLKH---TERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + + ++ H + +L++++ A LE N+ Q + EL Sbjct: 66 ISEQTSLDEQIACHYILSGEADLLINVIDAANLERNLYLTLQLV---------ELGIPC- 115 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 IV L+ +D S + N L+ Q G S G GI ++ Sbjct: 116 IVALNMLDIAKSQHIEIDINALSQQLGCPVIPLVSTRGRGINEL 159 >gi|163845608|ref|YP_001633652.1| GTP-binding protein Era [Chloroflexus aurantiacus J-10-fl] gi|163666897|gb|ABY33263.1| GTP-binding protein Era [Chloroflexus aurantiacus J-10-fl] Length = 469 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST L ++ K I + P TT P GI+ ++ I D PGI + + Sbjct: 179 VALVGKPNVGKSTLLNALLGEKVAIVSPRPQTTRVPVRGILSRPGEQIIFIDTPGIHEPS 238 Query: 221 HQGAGIGDRFLKHTERT 237 H+ +G ++ ERT Sbjct: 239 HR---LGKLMVELAERT 252 >gi|331014611|gb|EGH94667.1| GTP-binding protein HflX [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 433 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST SVT + A F TL P L ++ +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNSVTDSDVFAAHQLFATLDPTLRRLQLNDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ + + +LLH++ + E + + + ++ L +E Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDSHEPDRMSQIEQVMAVLGEIGAE 309 >gi|225868116|ref|YP_002744064.1| GTP-binding protein Era homolog [Streptococcus equi subsp. zooepidemicus] gi|259646273|sp|C0MCD8|ERA_STRS7 RecName: Full=GTPase Era gi|225701392|emb|CAW98467.1| GTP-binding protein Era homolog [Streptococcus equi subsp. zooepidemicus] Length = 298 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D +T +GI ++ + D PGI K Sbjct: 7 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQSTRNKIMGIYTTETEQIVFIDTPGIHKPK 66 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 67 ---TALGDFMVESAYSTLREVETVLFMVPA-DEKRGKGDDMIIERLKAARIPV-----IL 117 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ + +++ L D + Sbjct: 118 VINKIDKVHPDQLLEQIDDFRSQMDFKEIVP--ISALQGNNVETLVQLLKDNL 168 >gi|262304249|gb|ACY44717.1| GTP-binding protein [Ischnura verticalis] Length = 281 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 3/85 (3%) Query: 208 FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCI---LDELSA 264 + DI G++K A +G G+G+ FL H + + H+ A ++ + +LS Sbjct: 33 LTVVDIAGLVKGASEGQGLGNAFLSHIKACDAIFHLCRAFDDVDVVHVDGEVDPIRDLST 92 Query: 265 YNSELRKKIEIVGLSQIDTVDSDTL 289 + ELR K E V L ID ++ L Sbjct: 93 ISEELRLKDEEVLLQVIDKMERTVL 117 >gi|269122927|ref|YP_003305504.1| GTP-binding protein Era [Streptobacillus moniliformis DSM 12112] gi|268314253|gb|ACZ00627.1| GTP-binding protein Era [Streptobacillus moniliformis DSM 12112] Length = 299 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 10/164 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I+G PN GKST + + K I +D TT GIV +G ++I D PGI K Sbjct: 6 ISIVGRPNTGKSTLINKLIDEKVAIVSDKAGTTRDQIRGIVNKGENQYIFIDTPGIHKPK 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H G + + ++ ++L ++ +E D N K V ++ Sbjct: 66 HLLGEYMTNLAIESLNECDLILFLLDGTKEIGTG------DIFVNENIRNSKTPTYVIIN 119 Query: 280 QIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILEC 321 +ID + + L K E+ + G+ S+ G GI +I E Sbjct: 120 KIDKMSDEELNNKVEEIREKLGEFEGIITMSAAYGIGIHKIFEV 163 >gi|222523307|ref|YP_002567777.1| GTP-binding protein Era [Chloroflexus sp. Y-400-fl] gi|222447186|gb|ACM51452.1| GTP-binding protein Era [Chloroflexus sp. Y-400-fl] Length = 469 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST L ++ K I + P TT P GI+ ++ I D PGI + + Sbjct: 179 VALVGKPNVGKSTLLNALLGEKVAIVSPRPQTTRVPVRGILSRPGEQIIFIDTPGIHEPS 238 Query: 221 HQGAGIGDRFLKHTERT 237 H+ +G ++ ERT Sbjct: 239 HR---LGKLMVELAERT 252 >gi|46136817|ref|XP_390100.1| hypothetical protein FG09924.1 [Gibberella zeae PH-1] Length = 412 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 28/107 (26%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTL------------------------YPNLG 199 +IGL + G+S ++ I ++PFTT+ PN G Sbjct: 6 LIGLKDPGQSC--RNLALIASYIGNFPFTTIDPQRAIGYLQIECACTRFNVSDRCRPNYG 63 Query: 200 IVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 EG + L D+ G++ AH+G G+G++FL L+H+V Sbjct: 64 ACVEGRRSVPIELLDVAGLVPGAHEGRGLGNKFLDDLRHADALIHVV 110 >gi|332558240|ref|ZP_08412562.1| small GTP-binding protein [Rhodobacter sphaeroides WS8N] gi|332275952|gb|EGJ21267.1| small GTP-binding protein [Rhodobacter sphaeroides WS8N] Length = 447 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 15/168 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST +T A D F TL P + G+ ++ IL+D G I + Sbjct: 229 VALVGYTNAGKSTLFNRMTGADVLAKDMLFATLDPTMRGVTLPSGRKVILSDTVGFISDL 288 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 Q L+ ++LH+ ++ E QAA IL L + ++E+ Sbjct: 289 PTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQAADVAEILQSLGVKGAT--PQVEV- 345 Query: 277 GLSQIDTVDSDTLARKKNELATQCG--QVPFEFSSITGHGIPQILECL 322 +++D V+ +L Q + F S++TG G+P +LE + Sbjct: 346 -WNKLDLVEGAA----HEQLLAQAAKSETIFALSALTGEGLPDLLEAV 388 >gi|312135360|ref|YP_004002698.1| small gtp-binding protein [Caldicellulosiruptor owensensis OL] gi|311775411|gb|ADQ04898.1| small GTP-binding protein [Caldicellulosiruptor owensensis OL] Length = 609 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 22/175 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I ++G PN GKS +T ++++YP TT+ N G YK +++ D PG+ I + Sbjct: 21 IALVGNPNVGKSVIFNKLTGRYVEVSNYPGTTVDVNYGF----YKNYVIVDTPGVYGISS 76 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + + + +T++ ++++V + L+ ++ Q I Y E+ IV Sbjct: 77 FNDEEIVTRDIVLNTQK---IINVVDSVHLDRDLFLTQQLI-----DYQKEV-----IVV 123 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 L+ +D V+ + + +L G S+ G GI ++ E + +F RG+ Sbjct: 124 LNMVDEVEKNNIKIDIEKLKENLGVEVIATSASRGEGIDKLKEAIDKNLFK-RGK 177 >gi|308274308|emb|CBX30907.1| GTP-binding protein era homolog [uncultured Desulfobacterium sp.] Length = 303 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 56/130 (43%), Gaps = 8/130 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 + I G PNAGKST L + K I + P TT LG+V + + D PGI K N Sbjct: 17 VAIAGAPNAGKSTLLNKLLGFKISITSKKPQTTRNKILGVVHRPLSQLVFIDTPGIFKAN 76 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 I D L ++L + A N + + IL N E K ++ L+ Sbjct: 77 NALNIKIVDAALSTFGDVDIILIVGDA--ANPDSKSESIL----IKNMESINKPVVLALN 130 Query: 280 QIDTVDSDTL 289 +ID VD L Sbjct: 131 KIDIVDKSKL 140 >gi|237785901|ref|YP_002906606.1| GTP-binding protein Era [Corynebacterium kroppenstedtii DSM 44385] gi|237758813|gb|ACR18063.1| putative GTP-binding protein [Corynebacterium kroppenstedtii DSM 44385] Length = 310 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + +G PN GKST ++ K I AD P TT +P G++ E + I+ D PG+ Sbjct: 21 VSFVGRPNTGKSTLTNALVGEKIAITADQPETTRHPIRGVIHEDNAQIIVVDTPGL 76 >gi|229820922|ref|YP_002882448.1| GTP-binding proten HflX [Beutenbergia cavernae DSM 12333] gi|229566835|gb|ACQ80686.1| GTP-binding proten HflX [Beutenbergia cavernae DSM 12333] Length = 493 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 14/169 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I G NAGKS+ L +T A + + F TL P + + + + LAD G + Sbjct: 273 VPSVAIAGYTNAGKSSLLNRLTGAGVLVENALFATLDPTVRRAQTPDGRAYTLADTVGFV 332 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE---ENVQAAYQCILDELSAYNSELRKKI 273 + H+ L+ VLLH+V A E+ AA + +L ++ L Sbjct: 333 RALPHELVEAFRSTLEEVGDADVLLHVVDASHPDPESQIAAVRTVLADIEG----LTDTP 388 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 E++ L++ D D++ L R ++ G S+ TG GI + + + Sbjct: 389 EVLVLNKADIADAEVLTRLRS-----AGPHVVTVSARTGAGIEHLRDVV 432 >gi|213023502|ref|ZP_03337949.1| putative GTPase HflX [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 279 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + E +LAD G I Sbjct: 197 VPTVSLVGYTNAGKSTLFNQITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256 Query: 218 KN 219 ++ Sbjct: 257 RH 258 >gi|160915033|ref|ZP_02077246.1| hypothetical protein EUBDOL_01041 [Eubacterium dolichum DSM 3991] gi|158432832|gb|EDP11121.1| hypothetical protein EUBDOL_01041 [Eubacterium dolichum DSM 3991] Length = 298 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I+G PNAGKST L ++ + K I P TT GI+ +++ D PGI K Sbjct: 8 IAIVGRPNAGKSTLLNAILKEKVAITTPKPQTTRNNISGILTTEDTQYVFVDTPGIHKPK 67 Query: 221 HQ 222 H+ Sbjct: 68 HE 69 >gi|118618892|ref|YP_907224.1| GTP-binding protein Era [Mycobacterium ulcerans Agy99] gi|118571002|gb|ABL05753.1| GTP-binding protein Era [Mycobacterium ulcerans Agy99] Length = 300 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 39/166 (23%), Positives = 81/166 (48%), Gaps = 10/166 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 + ++G PN GKST ++ K I P TT + GIV + IL D PG+ + Sbjct: 10 VCLVGRPNTGKSTLTNALVGTKVAITSMRPQTTRHTIRGIVHRESFQIILVDTPGLHRPR 69 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 G + D ++ T ++ + +E++ + I+++++A +++ +V ++ Sbjct: 70 TLLGKRLND-LVRDTYSEVDVIGLCIPADESIGPGDRWIIEQIAATAPKVKL---VVIVT 125 Query: 280 QIDTVDSDTLARK---KNELATQCGQVPFEFSSITGHGIPQILECL 322 +ID V D +A + +EL T ++ S++TG + +++ L Sbjct: 126 KIDKVPKDQVAAQLVAVSELVTNSAEI-VPVSAVTGAQVEVLIDVL 170 >gi|116749242|ref|YP_845929.1| small GTP-binding protein [Syntrophobacter fumaroxidans MPOB] gi|189037168|sp|A0LJ92|DER_SYNFM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|116698306|gb|ABK17494.1| small GTP-binding protein [Syntrophobacter fumaroxidans MPOB] Length = 446 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 27/179 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF---TTLYPNLGIVKEGYKEFILADIPGIIK 218 + I+G PN GKST + + A P++ P T + IVK G +E++L D GI + Sbjct: 181 VSILGRPNVGKSTLVNHLLGA-PRVIVSPVPGTTRDAVDSHIVKAG-QEYVLIDTAGIRR 238 Query: 219 NAHQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDE---LSAYNSELRK 271 + + L+ ER+HV++ ++ A+E + D+ ++ Y E R Sbjct: 239 KGRTREKLEKISIIKALQSVERSHVVVLLLDAVE--------GVTDQDLHIAGYIKE-RS 289 Query: 272 KIEIVGLSQIDTVDSDTLARKK--NELATQCGQVPF----EFSSITGHGIPQILECLHD 324 + IVG+++ D D D K+ ++L + + + FS++TG + ++L + + Sbjct: 290 RACIVGINKWDAADKDPKRTKRFMDDLHDRFRFLTYAPVLTFSALTGRNVARLLPTVKE 348 >gi|269219563|ref|ZP_06163417.1| GTP-binding protein HflX [Actinomyces sp. oral taxon 848 str. F0332] gi|269210805|gb|EEZ77145.1| GTP-binding protein HflX [Actinomyces sp. oral taxon 848 str. F0332] Length = 499 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 8/165 (4%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN-AH 221 ++G NAGKS+ L +T A + + F TL P + + +E+ LAD G ++ Sbjct: 276 VVGYTNAGKSSLLNRLTGAGVLVENALFATLDPTVRRTQTASGREYTLADTVGFVRQLPT 335 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQI 281 Q L+ VL+H+V A + + + L+ R+ EIV LS+ Sbjct: 336 QLVEAFRSTLEEAGEADVLVHVVDASHHDPVGQVKAVRKVLAEVPG-TREAREIVVLSKS 394 Query: 282 DTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 D D LA ++ S +TG G+ ++ + + + Sbjct: 395 DLADPVDLAALRSRFPGSIA-----VSCLTGEGVDELRAAIEEAL 434 >gi|238027077|ref|YP_002911308.1| Small GTP-binding protein [Burkholderia glumae BGR1] gi|237876271|gb|ACR28604.1| Small GTP-binding protein [Burkholderia glumae BGR1] Length = 398 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 198 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 257 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 258 LPHQLVAAFRATLEETIHADLLLHVVDA 285 >gi|167630513|ref|YP_001681012.1| GTP-binding protein era [Heliobacterium modesticaldum Ice1] gi|226741216|sp|B0TAF1|ERA_HELMI RecName: Full=GTPase Era gi|167593253|gb|ABZ85001.1| GTP-binding protein era [Heliobacterium modesticaldum Ice1] Length = 299 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 8/93 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I IIG PN GKST + + K I +D P TT +G++ + I D PGI K Sbjct: 9 ISIIGRPNVGKSTLMNQLIGKKVAIMSDKPQTTRNRIVGVLNAPKGQAIFLDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEE 249 H+ +G+ + +T ++L++V A EE Sbjct: 69 HK---LGEIMVTTARKTLGEVDLILYVVDASEE 98 >gi|119471071|ref|ZP_01613630.1| GTP-binding protein EngA [Alteromonadales bacterium TW-7] gi|119445911|gb|EAW27192.1| GTP-binding protein EngA [Alteromonadales bacterium TW-7] Length = 488 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 13/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST +TR + +AD+P T G EFI+ D G I Sbjct: 5 IALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYDGYEFIVVDTGG-IDGT 63 Query: 221 HQGAGI--GDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G I D+ L E ++L +V A + A Q I + L + KK +V Sbjct: 64 EEGIEIEMADQSLLAIEEADIVLFLVDA-RVGMTVADQAIANHLRKQD----KKCFVVA- 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L+ G++ ++ G GI +LE Sbjct: 118 NKTDGIDADSNCAEFYQLS--LGEI-HHIAAAHGRGITLLLE 156 >gi|66808697|ref|XP_638071.1| nucleolar GTP-binding protein 1 [Dictyostelium discoideum AX4] gi|74853836|sp|Q54N72|NOG1_DICDI RecName: Full=Probable nucleolar GTP-binding protein 1 gi|60466518|gb|EAL64570.1| nucleolar GTP-binding protein 1 [Dictyostelium discoideum AX4] Length = 674 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + G PN GKS+F+ +TRA + Y FTT +G Y + + D PGI+ Sbjct: 173 LTGYPNVGKSSFMNKLTRANVDVQPYAFTTKSLFVGHTDFKYNTWQVIDTPGIL 226 >gi|332185025|ref|ZP_08386774.1| GTP-binding protein HflX [Sphingomonas sp. S17] gi|332014749|gb|EGI56805.1| GTP-binding protein HflX [Sphingomonas sp. S17] Length = 430 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 15/166 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 I ++G NAGKST +T A D F TL P L ++ G + IL+D G + + Sbjct: 210 IALVGYTNAGKSTLFNRLTGAHVMAKDLLFATLDPTLRQIQLPGIDKAILSDTVGFVSDL 269 Query: 220 AHQGAGIGDRFLKHTERTHVLLH---IVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 Q L+ +L+H I E +A + +L E+ R + Sbjct: 270 PTQLVAAFKATLEEVVSADLLIHVRDIAHPDSEAQRADVEAVLTEIGVDPETPRFE---- 325 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILE 320 ++ID V+ + + +L + G+ P S+++G GI Q++E Sbjct: 326 AWNKIDLVEGEL----REDLLAEAGRRPHIVAVSAMSGEGIDQLVE 367 >gi|254252263|ref|ZP_04945581.1| Small GTP-binding protein domain [Burkholderia dolosa AUO158] gi|124894872|gb|EAY68752.1| Small GTP-binding protein domain [Burkholderia dolosa AUO158] Length = 391 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 193 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 252 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 253 LPHQLVAAFRATLEETIHADLLLHVVDA 280 >gi|83814057|ref|YP_446511.1| GTPase [Salinibacter ruber DSM 13855] gi|83755451|gb|ABC43564.1| GTPase of unknown function subfamily, putative [Salinibacter ruber DSM 13855] Length = 427 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 4/125 (3%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN-A 220 ++G NAGKST L ++ + D F TL V+ + KE +++D G I+ Sbjct: 177 SLVGYTNAGKSTLLNALADEDLEAEDRLFATLDATTRTVELDSNKEVLMSDTVGFIRKLP 236 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H+ L + VL+H+V N + + + + L E R K +V ++ Sbjct: 237 HRLIESFRSTLDEVRESDVLIHVVDVTHPNYEEQMRVVAETLGEL--EARDKPTLVVFNK 294 Query: 281 IDTVD 285 ID ++ Sbjct: 295 IDAME 299 >gi|116689827|ref|YP_835450.1| small GTP-binding protein [Burkholderia cenocepacia HI2424] gi|170733166|ref|YP_001765113.1| GTP-binding proten HflX [Burkholderia cenocepacia MC0-3] gi|206560241|ref|YP_002231005.1| putative GTP-binding protein [Burkholderia cenocepacia J2315] gi|116647916|gb|ABK08557.1| GTP-binding protein HflX [Burkholderia cenocepacia HI2424] gi|169816408|gb|ACA90991.1| GTP-binding proten HflX [Burkholderia cenocepacia MC0-3] gi|198036282|emb|CAR52178.1| putative GTP-binding protein [Burkholderia cenocepacia J2315] Length = 395 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 198 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 257 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 258 LPHQLVAAFRATLEETIHADLLLHVVDA 285 >gi|329945549|ref|ZP_08293286.1| hypothetical protein HMPREF9056_01172 [Actinomyces sp. oral taxon 170 str. F0386] gi|328528729|gb|EGF55681.1| hypothetical protein HMPREF9056_01172 [Actinomyces sp. oral taxon 170 str. F0386] Length = 122 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 31/54 (57%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 I + G PNAGK++ ++T + K +YP T+ +LG + G + + D+PG Sbjct: 33 IALAGAPNAGKTSIYNALTGLRAKTGNYPGVTVTRSLGTCRIGETDLTIEDLPG 86 >gi|297172694|gb|ADI23661.1| GTPase [uncultured Gemmatimonadales bacterium HF4000_15H13] Length = 317 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 27/177 (15%) Query: 162 IGIIGLPNAGKSTFL-------ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIP 214 + ++G PNAGKST L S+ AK + TT GI+ G + I D P Sbjct: 22 VTLVGRPNAGKSTLLNRLIGEHLSIVTAKAQ------TTWQRVTGILTTGSDQLIFLDTP 75 Query: 215 GIIK--NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G+++ + Q A +G +E VLL I + + Q + + + E + Sbjct: 76 GLLEVHDLFQRAMLGAALQALSEADVVLLVIDCTRKPSPQETARIV------HAVEEAQA 129 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVP---FEFSSITGHGIPQILECLHDKI 326 V L++ID D + + LA G VP + S+ G G+ ++LE + + Sbjct: 130 PIHVALNKIDEADEQQIEAWERWLA---GHVPGALHQVSAADGSGVDELLEAVRSAL 183 >gi|295399214|ref|ZP_06809196.1| GTP-binding protein Era [Geobacillus thermoglucosidasius C56-YS93] gi|312110184|ref|YP_003988500.1| GTP-binding protein Era [Geobacillus sp. Y4.1MC1] gi|294978680|gb|EFG54276.1| GTP-binding protein Era [Geobacillus thermoglucosidasius C56-YS93] gi|311215285|gb|ADP73889.1| GTP-binding protein Era [Geobacillus sp. Y4.1MC1] Length = 302 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 19/169 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D P TT G+ + I D PG+ K Sbjct: 11 VSIVGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTDDAQIIFIDTPGMHKPK 70 Query: 221 HQGAGIGDRFLK----HTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + ++L +++A EE I++ L N+ + + Sbjct: 71 HK---LGDFMMKVALNALKEVDLILFMINA-EEGFGRGDAYIIERLKEVNTPV-----FL 121 Query: 277 GLSQIDTV---DSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 +++ID V D L + EL +P S++ G+ I ++E + Sbjct: 122 VINKIDLVHPNDLLPLIDRYKELYPFAEIIP--ISALQGNNIETLVEQI 168 >gi|15836693|ref|NP_297381.1| GTP-binding protein [Xylella fastidiosa 9a5c] gi|9104866|gb|AAF82901.1|AE003863_3 GTP-binding protein [Xylella fastidiosa 9a5c] Length = 450 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 1/89 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + I ++G N+GKST ++T A AD F TL P + + +LAD G ++ Sbjct: 198 VPRIALVGYTNSGKSTLFNALTGASAYTADQLFATLDPKVRRIVLPGSSAMLADTVGFVR 257 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSA 246 + H+ L +LLH++ A Sbjct: 258 HLPHELVAAFRSTLSEAREADLLLHVIDA 286 >gi|24379997|ref|NP_721952.1| GTP-binding protein Era [Streptococcus mutans UA159] gi|26006953|sp|P37214|ERA_STRMU RecName: Full=GTPase Era; AltName: Full=SGP gi|24377985|gb|AAN59258.1|AE014993_2 GTP-binding protein; Era-like protein [Streptococcus mutans UA159] Length = 299 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 15/171 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEKRGKGDNMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V + L + ++ Q Q S++ G+ + +++ L D + Sbjct: 119 VINKIDKVHPNQLLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHL 169 >gi|325524781|gb|EGD02755.1| GTP-binding proten HflX [Burkholderia sp. TJI49] Length = 396 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 198 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 257 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 258 LPHQLVAAFRATLEETIHADLLLHVVDA 285 >gi|307105429|gb|EFN53678.1| hypothetical protein CHLNCDRAFT_32043 [Chlorella variabilis] Length = 415 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 70/173 (40%), Gaps = 14/173 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST L ++T+A D F TL P V+ G K + D G I Sbjct: 158 IPVVALVGYTNAGKSTLLNTLTQAGVLAEDKLFATLDPTTRRVELPGGKALLFTDTVGFI 217 Query: 218 -KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKI 273 K Q L+ + +LLH+V N A A +L EL N Sbjct: 218 QKLPTQLVAAFRATLEEIKDASLLLHVVDVSHPNAAAQIDAVNGVLAELGVENMPTLNVW 277 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 V V AR++ T C S +TG G+ ++LE + K+ Sbjct: 278 NKVDACADPEVVRAVAARREQ---TVC------VSGLTGEGLGEMLERVSAKL 321 >gi|262304273|gb|ACY44729.1| GTP-binding protein [Orchesella imitari] Length = 272 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAY 265 + DI G+++ A QG G+G+ FL H + H+ A E++ V + D L Sbjct: 29 IVDIAGLVRGASQGQGLGNAFLSHIRACDAIFHVCRAFEDDDIIHVDGEVNPVRD-LETI 87 Query: 266 NSELRKKIEIVGLSQIDTVDS 286 + ELR K E L+ +D ++ Sbjct: 88 SEELRLKDEEYLLTNLDKLEK 108 >gi|87122644|ref|ZP_01078521.1| probable GTP-binding protein [Marinomonas sp. MED121] gi|86162102|gb|EAQ63390.1| probable GTP-binding protein [Marinomonas sp. MED121] Length = 444 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 2/94 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGII 217 + + ++G NAGKST +T A+ AD F TL P L + +LAD G I Sbjct: 199 VPTVSLVGYTNAGKSTLFNFITGAEVFAADQLFATLDPTLRRLDLAQVGAVVLADTVGFI 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + H+ LK + +LLH+V A + N Sbjct: 259 RQLPHKLIKAFQATLKESSEADLLLHVVDASDIN 292 >gi|302343158|ref|YP_003807687.1| GTP-binding proten HflX [Desulfarculus baarsii DSM 2075] gi|301639771|gb|ADK85093.1| GTP-binding proten HflX [Desulfarculus baarsii DSM 2075] Length = 547 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 16/136 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + I+G NAGKST L ++T + D F TL P ++ +E I+ D G I++ Sbjct: 381 LSIVGYTNAGKSTLLNTLTGSSVLSEDRLFATLDPTTRRLRFPQEREVIVTDTVGFIRDL 440 Query: 221 HQGAGIGDRF---LKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKI 273 + + F L+ + +LLH+ A +EE + AA + LDEL +L + Sbjct: 441 PK--ELRQAFAATLEELAQADLLLHVADASNPMVEEQI-AAVERTLDEL-----DLTQAP 492 Query: 274 EIVGLSQIDTVDSDTL 289 I+ L++ID D + + Sbjct: 493 TILVLNKIDKADPEAV 508 >gi|296876081|ref|ZP_06900135.1| GTP-binding protein Era [Streptococcus parasanguinis ATCC 15912] gi|296432792|gb|EFH18585.1| GTP-binding protein Era [Streptococcus parasanguinis ATCC 15912] Length = 299 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTNKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEARGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLAQIDDFRSQMDFKEIVP--ISALQGNNVSRLIDILSENL 169 >gi|323698496|ref|ZP_08110408.1| GTP-binding proten HflX [Desulfovibrio sp. ND132] gi|323458428|gb|EGB14293.1| GTP-binding proten HflX [Desulfovibrio desulfuricans ND132] Length = 557 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 12/139 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + ++G NAGKST L ++T ++ D F TL P ++ +E +L D G I+ Sbjct: 391 VSLVGYTNAGKSTLLNTLTSSRVLAEDKLFATLDPTSRRIRFPEEREVVLTDTVGFIRRL 450 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKIEI 275 R L+ + +L+ + A +EE V+A + ILDE+ EL I Sbjct: 451 PPDLKEAFRATLEELDSADLLVLVCDASHPEVEEQVEAV-RAILDEM-----ELSSIPSI 504 Query: 276 VGLSQIDTVDSDTLARKKN 294 + L++ D +D + A +N Sbjct: 505 LVLNKWDKLDEEGRAAMRN 523 >gi|326792326|ref|YP_004310147.1| ferrous iron transporter B [Clostridium lentocellum DSM 5427] gi|326543090|gb|ADZ84949.1| ferrous iron transport protein B [Clostridium lentocellum DSM 5427] Length = 723 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K G+++ I+ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLK-GHEDVIIIDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E V+L+IV + LE N+ + Q I EL + ++ + Sbjct: 64 YTLEEVVARNYLINETPDVILNIVDGTNLERNLYLSTQLI---------ELGIPV-VMAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V + ++L+ + G E S++ G GI + E Sbjct: 114 NMMDIVSKNGDLIHIDKLSQKLGCPVVEISALKGKGISEAAE 155 >gi|293376065|ref|ZP_06622317.1| ferrous iron transport protein B [Turicibacter sanguinis PC909] gi|325845241|ref|ZP_08168545.1| ferrous iron transport protein B [Turicibacter sp. HGF1] gi|292645323|gb|EFF63381.1| ferrous iron transport protein B [Turicibacter sanguinis PC909] gi|325488682|gb|EGC91087.1| ferrous iron transport protein B [Turicibacter sp. HGF1] Length = 722 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 6/101 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG PN GK+T ++T + + ++P T+ G +K G+K+ + D+PGI + Sbjct: 6 VALIGNPNCGKTTTFNALTGSNQYVGNWPGVTVEKKEGRLK-GHKDVTIVDLPGIYSLSP 64 Query: 222 QGAG--IGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCI 258 I FL H E+ V+L+IV A +E N+ Q I Sbjct: 65 YSPEEIITREFLIH-EKPDVVLNIVDASNIERNLYLTTQLI 104 >gi|227498623|ref|ZP_03928767.1| GTP-binding protein era [Acidaminococcus sp. D21] gi|226904079|gb|EEH89997.1| GTP-binding protein era [Acidaminococcus sp. D21] Length = 306 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 26/173 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I +IG PNAGKST + + K I +D P TT L I+ + I D PG+ K Sbjct: 13 IAVIGRPNAGKSTLIDKLIGEKAAIVSDRPQTTRNRILCILSTEKAQLIFLDTPGLHKPK 72 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + +G+ +K E + +L++V A E+ + AY E KK+++ Sbjct: 73 DK---LGEHMVKAAEDSLKDVDAVLYVVDATEKRGKG---------EAYILERLKKVQVP 120 Query: 277 GLSQIDTVDSDTLARKKNELA-TQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 + ++ V D + +K+N L Q + F HGI L L D+ F+ Sbjct: 121 VILVLNKV--DLINQKENLLPRIDAFQKAYPF-----HGI-MTLSALEDRDFT 165 >gi|224029967|gb|ACN34059.1| unknown [Zea mays] Length = 592 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 24/118 (20%) Query: 134 TNQAPYYANPGILGQEKIIWL--------KLKLIADIGIIGLPNAGKSTFLASVTRAKPK 185 TN P ++ LG E +I L +LKL +GI+GLPN GKS+ + S+ R++ Sbjct: 238 TNIIPQSSD--CLGAENLIRLLKNYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSR-- 293 Query: 186 IADYPFTTLYPNLGIVKEGY-----KEFILADIPGII--KNAHQGAGIGDRFLKHTER 236 + G+ + K+ L D PG++ K+++ G + R K E+ Sbjct: 294 -----VVNVGSTPGVTRSMQEVQLDKKVKLLDCPGVVMLKSSNSGVSVALRNCKRVEK 346 >gi|206602913|gb|EDZ39393.1| Putative GTP binding protein [Leptospirillum sp. Group II '5-way CG'] Length = 518 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + ++G N GKST L +T + + F TL P ++ +E IL D G I+N Sbjct: 342 VSLVGYTNVGKSTLLNQLTGSSVLTENRMFATLDPTTRRLRFPREREIILTDTVGFIRNL 401 Query: 221 HQGAGIGDRFL---KHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + FL + H+LLH+ A ++ Q + EL K++EI Sbjct: 402 --PGDLRRAFLATFDELKDAHLLLHVADAFHPKMEEQIQRV--------EELLKEMEIDR 451 Query: 278 LSQIDTVD-SDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 + +I ++ +D L+ + ++ + F+ +++ + +LE + ++FS Sbjct: 452 IPRILILNKTDCLSPAERDILSVRFPEAFQVAALDKATLLPLLEEMERRLFS 503 >gi|157814218|gb|ABV81854.1| putative GTP-binding protein [Triops longicaudatus] Length = 278 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---ELSAYN 266 + DI G++K AH+G G+G+ FL H + L H+ E+ + ++ ++ N Sbjct: 35 ILDIAGLVKGAHEGQGLGNAFLSHIKSVDALFHMCRCFEDGDVTHVEGDVNPGRDVEIIN 94 Query: 267 SELRKKIEIVGLSQIDTVDSDTLARKK 293 ELR K E V +I+ V+ + KK Sbjct: 95 EELRLKDEEVLNKEIEKVERLLRSDKK 121 >gi|172060766|ref|YP_001808418.1| GTP-binding proten HflX [Burkholderia ambifaria MC40-6] gi|171993283|gb|ACB64202.1| GTP-binding proten HflX [Burkholderia ambifaria MC40-6] Length = 396 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 198 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 257 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 258 LPHQLVAAFRATLEETIHADLLLHVVDA 285 >gi|77463363|ref|YP_352867.1| putative GTP-binding protein [Rhodobacter sphaeroides 2.4.1] gi|77387781|gb|ABA78966.1| Putative GTP-binding protein [Rhodobacter sphaeroides 2.4.1] Length = 416 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 15/168 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST +T A D F TL P + G+ ++ IL+D G I + Sbjct: 198 VALVGYTNAGKSTLFNRMTGADVLAKDMLFATLDPTMRGVTLPSGRKVILSDTVGFISDL 257 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 Q L+ ++LH+ ++ E QAA IL L + ++E+ Sbjct: 258 PTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQAADVAEILQSLGVKGAT--PQVEV- 314 Query: 277 GLSQIDTVDSDTLARKKNELATQCG--QVPFEFSSITGHGIPQILECL 322 +++D V+ +L Q + F S++TG G+P +LE + Sbjct: 315 -WNKLDLVEGAA----HEQLLAQAAKSETIFALSALTGEGLPDLLEAV 357 >gi|126462218|ref|YP_001043332.1| small GTP-binding protein [Rhodobacter sphaeroides ATCC 17029] gi|126103882|gb|ABN76560.1| small GTP-binding protein [Rhodobacter sphaeroides ATCC 17029] Length = 447 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 15/168 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST +T A D F TL P + G+ ++ IL+D G I + Sbjct: 229 VALVGYTNAGKSTLFNRMTGADVLAKDMLFATLDPTMRGVTLPSGRKVILSDTVGFISDL 288 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 Q L+ ++LH+ ++ E QAA IL L + ++E+ Sbjct: 289 PTQLVAAFRATLEEVLEADLILHVRDIAHPETAEQAADVAEILQSLGVKGAT--PQVEV- 345 Query: 277 GLSQIDTVDSDTLARKKNELATQCG--QVPFEFSSITGHGIPQILECL 322 +++D V+ +L Q + F S++TG G+P +LE + Sbjct: 346 -WNKLDLVEGAA----HEQLLAQAAKSETIFALSALTGEGLPDLLEAV 388 >gi|304389603|ref|ZP_07371565.1| GTP-binding protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304327156|gb|EFL94392.1| GTP-binding protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 524 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 18/175 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 I + I+G NAGKS+ L + A + D F TL P++ EG +E+ LAD G Sbjct: 287 IPAVAIVGYTNAGKSSLLNRLAGANLLVHDALFATLDPSVRRAHTPEG-REYTLADTVGF 345 Query: 217 IKNAHQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE- 274 ++ R L+ T ++LH+V + A + L EL + IE Sbjct: 346 VRRLPTELVEAFRSTLEETAMADLILHVVDGSNPDPMAQVAAVDATL-----ELVEGIEE 400 Query: 275 ---IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID + LA ++ L + S+ TG GI + + + D++ Sbjct: 401 ISVMMVVNKIDQASAPALALLRHSLPEA-----YYVSARTGEGIEALQQSIADRL 450 >gi|169334000|ref|ZP_02861193.1| hypothetical protein ANASTE_00392 [Anaerofustis stercorihominis DSM 17244] gi|169258717|gb|EDS72683.1| hypothetical protein ANASTE_00392 [Anaerofustis stercorihominis DSM 17244] Length = 716 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 14/161 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 + + G PN+GK+T +T A + ++P T+ G VK G +E L D+PGI + Sbjct: 4 LALAGNPNSGKTTLFNDLTGASQYVGNWPGVTVEKKEGRVK-GDREIHLVDLPGIYSLSP 62 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ +++IV A LE N+ Q + EL + I+ L Sbjct: 63 YTLEEVVSRNFLLNEKPDAIINIVDATNLERNLYLTTQLV---------ELGIPV-IIAL 112 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 + +D + +L Q G E S++ G G ++ Sbjct: 113 NMMDIIKKKGEIINTKKLEEQIGCKVVEISALKGEGTKNLI 153 >gi|167631086|ref|YP_001681585.1| ferrous iron transport protein b [Heliobacterium modesticaldum Ice1] gi|167593826|gb|ABZ85574.1| ferrous iron transport protein b [Heliobacterium modesticaldum Ice1] Length = 626 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 22/141 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + + G PN GK+T ++T A I ++P T+ +G +K+ K F + D+PG + Sbjct: 6 VALAGNPNTGKTTLFNALTGAHQHIGNWPGVTVEKAVGRLKKADKTFTIVDLPG--TYSI 63 Query: 222 QGAGIGDRFLK---HTERTHVLLHIVSA--LEENVQAAYQCI------LDELSAYNSELR 270 + +R + + E+ V++++V A LE N+ Q I L L+ + + Sbjct: 64 SAYSLEERIVADYLNREKPDVVVNVVDASNLERNLYLTVQLIEAGTPLLIALNMVDEAKQ 123 Query: 271 KKIEIVGLSQIDTVDSDTLAR 291 K ++I D+D L+R Sbjct: 124 KGVQI---------DTDALSR 135 >gi|311113256|ref|YP_003984478.1| GTP-binding protein [Rothia dentocariosa ATCC 17931] gi|310944750|gb|ADP41044.1| GTP-binding protein [Rothia dentocariosa ATCC 17931] Length = 549 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 15/184 (8%) Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE---- 203 + K + K + + I G NAGKS+ L +T A + + F TL P + + Sbjct: 292 ETKRLSRKRNRVPSVAIAGYTNAGKSSLLNRLTDAGVLVENALFATLDPTVRKAQTPDGI 351 Query: 204 GYKEFILADIPGIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 GY L+D G +++ Q L+ V+LH+V A + + + + + + Sbjct: 352 GY---TLSDTVGFVRSLPTQLVEAFRSTLEEVADADVILHVVDASHPDPEGQIRAVREVI 408 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + ++ R+ EI+ L++ D D L R + + S+ TG GI ++ + + Sbjct: 409 ADLDA--RRIPEIIALNKADAADPFILERMRQRESNHVI-----VSARTGEGIDELKQKI 461 Query: 323 HDKI 326 D I Sbjct: 462 ADTI 465 >gi|294508447|ref|YP_003572505.1| GTP-binding protein hflX [Salinibacter ruber M8] gi|294344775|emb|CBH25553.1| GTP-binding protein hflX [Salinibacter ruber M8] Length = 455 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 4/125 (3%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN-A 220 ++G NAGKST L ++ + D F TL V+ + KE +++D G I+ Sbjct: 205 SLVGYTNAGKSTLLNALADEDLEAEDRLFATLDATTRTVELDSNKEVLMSDTVGFIRKLP 264 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H+ L + VL+H+V N + + + + L E R K +V ++ Sbjct: 265 HRLIESFRSTLDEVRESDVLIHVVDVTHPNYEEQMRVVAETLGEL--EARDKPTLVVFNK 322 Query: 281 IDTVD 285 ID ++ Sbjct: 323 IDAME 327 >gi|209521121|ref|ZP_03269849.1| GTP-binding proten HflX [Burkholderia sp. H160] gi|209498431|gb|EDZ98558.1| GTP-binding proten HflX [Burkholderia sp. H160] Length = 395 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 198 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRE 257 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 258 LPHQLVAAFRATLEETIHADLLLHVVDA 285 >gi|194901584|ref|XP_001980332.1| GG19324 [Drosophila erecta] gi|190652035|gb|EDV49290.1| GG19324 [Drosophila erecta] Length = 373 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 24/155 (15%) Query: 162 IGIIGLPNAGKSTFLASVT--RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 I +IG+PN GKSTF+ + R P A TT N I G + + D PG++ Sbjct: 62 IAVIGVPNVGKSTFINNTVNHRVCPTSAKV-HTTRQSNTAIFTTGQTQLVFYDTPGLVTQ 120 Query: 220 AHQGAGIGDRFLKHTERTHVLLH--IVSALEE-----NVQAAYQCILDELSAYNS----- 267 D+ K R H + H I++ + + + + +LD L AY++ Sbjct: 121 HEIRRHHLDQNFKSAYR-HAIQHADIIAVVHDASNGWTRKELHPTVLDTLKAYSNLPSFL 179 Query: 268 ------ELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L+ K ++ L I T+ +DTL K E+ Sbjct: 180 VLNKIDALKSKRLLLDL--IKTLTNDTLTVGKREV 212 >gi|170729308|ref|YP_001774741.1| GTP-binding protein [Xylella fastidiosa M12] gi|167964101|gb|ACA11111.1| GTP-binding protein [Xylella fastidiosa M12] Length = 450 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 1/89 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + I ++G N+GKST ++T A AD F TL P + + +LAD G ++ Sbjct: 198 VPRIALVGYTNSGKSTLFNALTGASAYTADQLFATLDPKVRRIVLPGSSAMLADTVGFVR 257 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSA 246 + H+ L +LLH++ A Sbjct: 258 HLPHELVAAFRSTLSEAREADLLLHVIDA 286 >gi|146341376|ref|YP_001206424.1| GTP-binding protein Era [Bradyrhizobium sp. ORS278] gi|189037292|sp|A4YWC7|ERA_BRASO RecName: Full=GTPase Era gi|146194182|emb|CAL78203.1| GTP-binding protein (era) [Bradyrhizobium sp. ORS278] Length = 307 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 35/181 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGI---- 216 + +IG PN GKST + ++ +K I T + GIV EG + IL D PGI Sbjct: 17 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGQSQIILVDTPGIFSPK 76 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 + A GA D VLL L++ QA I+D+ ++ E Sbjct: 77 RRLDRAMVTTAWSGAHDADLVC-------VLLDAKKGLDDEAQA----IIDKAASVAHE- 124 Query: 270 RKKIEIVGLSQIDTVDSDTL----ARKKNELATQCGQVPFEFSSITGHGIPQILECLHDK 325 +I+ ++++D V + L A +LA F S+++G G+ + L + Sbjct: 125 ----KILVVNKVDLVPREKLLALVAAANEKLAFART---FMISALSGDGVDDLRRALAEM 177 Query: 326 I 326 + Sbjct: 178 V 178 >gi|145589466|ref|YP_001156063.1| GTP-binding protein, HSR1-related [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047872|gb|ABP34499.1| GTP-binding protein HflX [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 387 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 5/113 (4%) Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPG 215 K + + ++G NAGKST ++T+A AD F TL V EG +++D G Sbjct: 170 KDVFSVSLVGYTNAGKSTLFNALTKAGTYAADQLFATLDTTSRRVHLEGVGSIVVSDTVG 229 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA---LEENVQAAYQCILDELSA 264 I++ HQ L T ++LH++ A + +A + +L+E+ A Sbjct: 230 FIRDLPHQLVEAFRATLDETIHADLILHVIDACSPVAREQKAEVEAVLEEIGA 282 >gi|67516821|ref|XP_658296.1| hypothetical protein AN0692.2 [Aspergillus nidulans FGSC A4] gi|40746312|gb|EAA65468.1| hypothetical protein AN0692.2 [Aspergillus nidulans FGSC A4] Length = 385 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Query: 196 PNLGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 PN G +G + L D+ G++ AHQG G+G++FL + L+H+V Sbjct: 36 PNYGACTDGKRSVPIELLDVAGLVPGAHQGRGLGNKFLDDLRQADALIHVV 86 >gi|323450710|gb|EGB06590.1| hypothetical protein AURANDRAFT_28954 [Aureococcus anophagefferens] Length = 412 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 54/110 (49%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG P+ GKS+ L+++T + + A Y FTTL G + + L D+PGII+ A Sbjct: 65 VALIGFPSVGKSSLLSTLTSTQSEAAGYEFTTLTCIPGNILYNDTKIQLLDLPGIIEGAA 124 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 G G G + + ++L ++ A +E V + EL L K Sbjct: 125 HGKGRGKEVIAVARTSDLVLIVLDAGKEGVDDHKGILERELETVGLRLNK 174 >gi|312622218|ref|YP_004023831.1| small GTP-binding protein [Caldicellulosiruptor kronotskyensis 2002] gi|312202685|gb|ADQ46012.1| small GTP-binding protein [Caldicellulosiruptor kronotskyensis 2002] Length = 607 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 81/170 (47%), Gaps = 21/170 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I ++G PN GKS +T ++++YP TT+ N G YK++++ D PG+ I + Sbjct: 19 IALVGNPNVGKSVIFNRLTGRYVEVSNYPGTTVDVNYGF----YKDYVIVDTPGVYGISS 74 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + + + +T++ ++++V + L+ ++ Q I Y E+ IV Sbjct: 75 FNDEEIVTRDIVLNTQK---VINVVDSVHLDRDLFLTQQLI-----DYQKEV-----IVV 121 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 L+ +D V+ + + ++L G S+ G GI ++ E + +F Sbjct: 122 LNMVDEVEKNNITIDIDKLKESLGVEVIVTSASKGIGIDKLREAIDKNLF 171 >gi|256384053|gb|ACU78623.1| GTP-binding protein Era [Mycoplasma mycoides subsp. capri str. GM12] gi|256384885|gb|ACU79454.1| GTP-binding protein Era [Mycoplasma mycoides subsp. capri str. GM12] gi|296456013|gb|ADH22248.1| GTP-binding protein Era [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 301 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 33/177 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIV-KEGYKEFILADIPGIIKN 219 + IIG PN GKST L + K I + P TT GI+ K+ + + D PG+ Sbjct: 9 VSIIGRPNVGKSTLLNKLIGEKISIVTNKPQTTRNNIRGILTKKDQYQIVFIDTPGV--- 65 Query: 220 AHQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE-LRKKI 273 H D+F LK T+ V+L + + DE+ N L K+I Sbjct: 66 -HTSKKQLDKFLNTSALKSTKDVDVILFLAPS-------------DEVIGKNDLFLLKQI 111 Query: 274 E------IVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECL 322 E I+ +++ D+V + L K NE ++ Q SSIT I ++LE + Sbjct: 112 ENLDVFKILVITKADSVTKEQLILKANEWSSYQDQFDEIIITSSITNLNIEKLLELI 168 >gi|254476279|ref|ZP_05089665.1| GTP-binding protein Era [Ruegeria sp. R11] gi|214030522|gb|EEB71357.1| GTP-binding protein Era [Ruegeria sp. R11] Length = 301 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 + +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGDSQIVFVDTPGLFR 65 >gi|193213385|ref|YP_001999338.1| GTP-binding protein Era [Chlorobaculum parvum NCIB 8327] gi|193086862|gb|ACF12138.1| GTP-binding protein Era [Chlorobaculum parvum NCIB 8327] Length = 305 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 10/157 (6%) Query: 165 IGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGII---KNA 220 +G PNAGKST L + K I P TT GI + + I+ D PGI+ ++ Sbjct: 14 VGAPNAGKSTLLNRLLDHKLSIVTPKPQTTRKKITGIYHDDRSQIIILDTPGIMDPKQSL 73 Query: 221 HQGA-GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H+ I R L+ T+ L+ L++ + + DEL K ++ L+ Sbjct: 74 HESMLEITRRSLRDTDVIVALI----PLQKGEEPFDRAFADELIEQWVRPADKPFVIALN 129 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFE-FSSITGHGI 315 + D V +T+ + +NE+ + + S++TG I Sbjct: 130 KADLVPEETVHQVQNEIMERYHPIAVPALSALTGSNI 166 >gi|170781619|ref|YP_001709951.1| putative GTP-binding protein [Clavibacter michiganensis subsp. sepedonicus] gi|169156187|emb|CAQ01329.1| putative GTP-binding protein [Clavibacter michiganensis subsp. sepedonicus] Length = 521 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 2/135 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGII 217 + + I+G NAGKS+ L VT+A + + F TL + + + + LAD G + Sbjct: 298 VPSVAIVGYTNAGKSSLLNRVTKAGVLVENALFATLDATVRKTETDQGQLYTLADTVGFV 357 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +N HQ L+ + VL+H+V A + A + + ++ N+ +I + Sbjct: 358 RNLPHQLVEAFRSTLEELADSDVLVHVVDASHPDPGAQLATVHEVIAEVNASAIPEIVVF 417 Query: 277 GLSQIDTVDSDTLAR 291 S + + D + R Sbjct: 418 NKSDLASADDRVVLR 432 >gi|168704353|ref|ZP_02736630.1| ferrous iron transport protein B [Gemmata obscuriglobus UQM 2246] Length = 748 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 22/172 (12%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PNAGKST +++ + +I +YP T+ G + G L D+PG A Sbjct: 2 SVALVGNPNAGKSTLFNALSGLRQRIGNYPGVTVEMKKGECRVGEATLALIDLPGTYSLA 61 Query: 221 HQGAG--------IGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELR 270 + +G R R V++ +V A L+ ++ Q + +L Sbjct: 62 ARSPDEMVAVDLLLGRR--PEEPRPSVIVSVVDATNLDRHLYLTSQLL---------DLG 110 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + +V ++ ID + L +LA G + +G G+P++ + + Sbjct: 111 VPV-VVAVNMIDAAQAQGLVTNYAKLAVALGVPVVPIQANSGAGLPELTQTV 161 >gi|134295837|ref|YP_001119572.1| small GTP-binding protein [Burkholderia vietnamiensis G4] gi|134138994|gb|ABO54737.1| GTP-binding protein HflX [Burkholderia vietnamiensis G4] Length = 396 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 198 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 257 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 258 LPHQLVAAFRATLEETIHADLLLHVVDA 285 >gi|300933265|ref|ZP_07148521.1| GTP-binding protein Era [Corynebacterium resistens DSM 45100] Length = 321 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 6/130 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +G PN GKST ++ K I AD P TT +P G++ + ++ D PG+ + Sbjct: 32 VSFVGRPNTGKSTLTNALVGQKIAITADQPETTRHPIRGVIHRDDSQIVVVDTPGLHRPR 91 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG-LS 279 + +K T + L+ + +E + + I+D + ++ K E++G ++ Sbjct: 92 TLLGERLNEIVKDTYQDVDLIAVCVPADEKIGPGDRWIVDAV----RKVAPKTELIGVVT 147 Query: 280 QIDTVDSDTL 289 ++D V D + Sbjct: 148 KVDKVGKDKV 157 >gi|195656991|gb|ACG47963.1| guanine nucleotide-binding protein-like 3 [Zea mays] Length = 592 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 28/126 (22%) Query: 130 FKSS----TNQAPYYANPGILGQEKIIWL--------KLKLIADIGIIGLPNAGKSTFLA 177 +KSS TN P ++ LG E +I L +LKL +GI+GLPN GKS+ + Sbjct: 230 WKSSKLDKTNIIPQSSD--CLGAENLIRLLKNYSRSHELKLAITVGIVGLPNVGKSSLIN 287 Query: 178 SVTRAKPKIADYPFTTLYPNLGIVKEGY-----KEFILADIPGII--KNAHQGAGIGDRF 230 S+ R++ + G+ + K+ L D PG++ K+++ G + R Sbjct: 288 SLKRSR-------VVNVGSTPGVTRSMQEVQLDKKVKLLDCPGVVMLKSSNSGVSVALRN 340 Query: 231 LKHTER 236 K E+ Sbjct: 341 CKRVEK 346 >gi|163744854|ref|ZP_02152214.1| GTP-binding protein Era [Oceanibulbus indolifex HEL-45] gi|161381672|gb|EDQ06081.1| GTP-binding protein Era [Oceanibulbus indolifex HEL-45] Length = 302 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 + +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGQTQLVFVDTPGLFQ 65 >gi|114770107|ref|ZP_01447645.1| GTP-binding protein Era [alpha proteobacterium HTCC2255] gi|114548944|gb|EAU51827.1| GTP-binding protein Era [alpha proteobacterium HTCC2255] Length = 303 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 6/168 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST + + AK I + T + GI + + + D PG+ K Sbjct: 9 VALIGEPNAGKSTLMNRIVGAKVSIVTHKVQTTRARIRGIAMQENSQLVFVDTPGLFKTR 68 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + + +++ IV A + + IL+ L +++ + I+ ++ Sbjct: 69 RKLDKAMVAAAWSGAADADIVVLIVEA-HRGITDGVEMILEGLE--KRDVKGQRLILAIN 125 Query: 280 QIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECLHDKI 326 +ID + SD L L + + F S+ G+G+ + + L + Sbjct: 126 KIDKIKSDALLSLTQSLNQRLNFEETFMISAEKGYGVKVLQDWLSSNL 173 >gi|71275937|ref|ZP_00652220.1| Small GTP-binding protein domain [Xylella fastidiosa Dixon] gi|71900023|ref|ZP_00682168.1| Small GTP-binding protein domain [Xylella fastidiosa Ann-1] gi|71163314|gb|EAO13033.1| Small GTP-binding protein domain [Xylella fastidiosa Dixon] gi|71730233|gb|EAO32319.1| Small GTP-binding protein domain [Xylella fastidiosa Ann-1] Length = 450 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 1/89 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + I ++G N+GKST ++T A AD F TL P + + +LAD G ++ Sbjct: 198 VPRIALVGYTNSGKSTLFNALTGASAYTADQLFATLDPKVRRIVLPGSSAMLADTVGFVR 257 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSA 246 + H+ L +LLH++ A Sbjct: 258 HLPHELVAAFRSTLSEAREADLLLHVIDA 286 >gi|126439543|ref|YP_001059218.1| GTP-binding proten HflX [Burkholderia pseudomallei 668] gi|126219036|gb|ABN82542.1| GTP-binding protein HflX [Burkholderia pseudomallei 668] Length = 387 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 193 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 252 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 253 LPHQLVAAFRATLEETIHADLLLHVVDA 280 >gi|332981267|ref|YP_004462708.1| small GTP-binding protein [Mahella australiensis 50-1 BON] gi|332698945|gb|AEE95886.1| small GTP-binding protein [Mahella australiensis 50-1 BON] Length = 186 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI-- 216 + I ++G PN GKS +T +++YP TT+ + G + G EF + D PG+ Sbjct: 21 LPKIALVGTPNVGKSVIFNRLTGKYVTVSNYPGTTVEISRGKGRIGDCEFEIIDTPGMYS 80 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 + + + R L E+ V+LHIV A Sbjct: 81 LMPITEEERVARRLLLE-EKPDVVLHIVDA 109 >gi|312195030|ref|YP_004015091.1| GTP-binding proten HflX [Frankia sp. EuI1c] gi|311226366|gb|ADP79221.1| GTP-binding proten HflX [Frankia sp. EuI1c] Length = 482 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 17/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I G NAGKS+ L +T A + D F TL P + + +G + F L D G Sbjct: 259 VPSVAIAGYTNAGKSSLLNRLTGAGVLVEDALFATLDPTVRRATLPDG-RAFTLTDTVGF 317 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKK 272 +++ HQ L+ ++LH+V + +A + +L+++ A + Sbjct: 318 VRHLPHQIVEAFRSTLEEVADADLILHVVDGSHADPVGQLSAVREVLNDIDAGDVP---- 373 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E+V +++ D D T+A + + S+ TG GI +++E L ++ Sbjct: 374 -ELVIVNKTDIADKTTVAAIR-----RVAPDAVCVSARTGAGIAELVEALATRV 421 >gi|221212776|ref|ZP_03585752.1| GTP-binding protein HflX [Burkholderia multivorans CGD1] gi|221166989|gb|EED99459.1| GTP-binding protein HflX [Burkholderia multivorans CGD1] Length = 396 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 198 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQIVVSDTVGFIRE 257 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 258 LPHQLVAAFRATLEETIHADLLLHVVDA 285 >gi|124516125|gb|EAY57633.1| putative GTP binding protein [Leptospirillum rubarum] Length = 518 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + ++G N GKST L +T + + F TL P ++ +E IL D G I+N Sbjct: 342 VSLVGYTNVGKSTLLNQLTGSSVLTENRMFATLDPTTRRLRFPREREIILTDTVGFIRNL 401 Query: 221 HQGAGIGDRFL---KHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + FL + H+LLH+ A ++ Q + EL K++EI Sbjct: 402 --PGDLRRAFLATFDELKDAHLLLHVADAFHPKMEEQIQRV--------EELLKEMEIDR 451 Query: 278 LSQIDTVD-SDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 + +I ++ +D L+ + ++ + F+ +++ + +LE + ++FS Sbjct: 452 IPRILILNKTDCLSPAERDILSVRFPDAFQVAALDKTTLLPLLEEMERRLFS 503 >gi|152978550|ref|YP_001344179.1| GTP-binding protein EngA [Actinobacillus succinogenes 130Z] gi|150840273|gb|ABR74244.1| small GTP-binding protein [Actinobacillus succinogenes 130Z] Length = 503 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 12/164 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANISGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A +A ++ Y + + K IV Sbjct: 65 EEGVEEKMAEQSLLAIEEADVVLFLVDA-----RAGLTPADIGIANYLRQRQSKTTIVVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 ++ D +D+D+ + +L G++ + ++ G G+ Q++E + Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGEIT-QIAAAQGRGVAQLMEAV 160 >gi|261366213|ref|ZP_05979096.1| ferrous iron transport protein B [Subdoligranulum variabile DSM 15176] gi|282571805|gb|EFB77340.1| ferrous iron transport protein B [Subdoligranulum variabile DSM 15176] Length = 726 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 18/161 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T +T + + ++P T+ G +K G+K+ ++ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNDLTGSNQYVGNWPGVTVEKKEGRLK-GHKDVVIQDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ V+L+I+ + +E N+ Q I EL + ++ + Sbjct: 64 YTLEEVVARGYLVGEKPDVILNIIDGTNIERNLYLTTQLI---------ELGIPV-VMAV 113 Query: 279 SQIDTV--DSDTLARKKNELATQCGQVPFEFSSITGHGIPQ 317 + ID V + DT+ K+ L+ + G E S++ G G Q Sbjct: 114 NMIDLVRKNGDTIDLKR--LSRELGCEAIEISALKGEGSRQ 152 >gi|74317381|ref|YP_315121.1| putative GTP-binding protein [Thiobacillus denitrificans ATCC 25259] gi|74056876|gb|AAZ97316.1| putative GTP-binding protein [Thiobacillus denitrificans ATCC 25259] Length = 458 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 2/90 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 +A + ++G NAGKST + ++T ++ +A+ F TL + + EG +++D G I Sbjct: 231 LASVALVGYTNAGKSTLMRALTGSEVLVANKLFATLDTTVRTLHPEGVPRVLVSDTVGFI 290 Query: 218 KNAHQG-AGIGDRFLKHTERTHVLLHIVSA 246 KN G L+ +LLH++ A Sbjct: 291 KNLPHGLVASFKSTLEEALDASLLLHVIDA 320 >gi|45656474|ref|YP_000560.1| GTP-binding protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45599709|gb|AAS69197.1| GTP-binding protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 518 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 38/202 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILA-------DI 213 +GI+G NAGKSTFL ++T ++ + F TL P ++ +E I++ D+ Sbjct: 317 VGIVGYTNAGKSTFLNALTNSEVLSENKLFATLDPTTRRIRFPEEREIIISDTVGFIHDL 376 Query: 214 PGIIKNAHQGA--GIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELS----- 263 P + NA + +GD + +L+H+V + + A + IL+EL Sbjct: 377 PPELSNAFKATLEELGD--------SDLLVHVVDVSNPDYKLQMEAVEKILEELELSHIP 428 Query: 264 ---AYN--SELRK-KIEIV--GLSQIDTVDS----DTLARKKNELATQCGQVPFEFSSIT 311 +N L K KI ++ G + +VD + + K EL S+ Sbjct: 429 MIQVFNKIDRLEKFKIWVIENGYKKSSSVDHGPGLEAITDLKEELGIDTFSDSILVSAFQ 488 Query: 312 GHGIPQILECLHDKIFSIRGEN 333 G G+ L+ L D+I+++ N Sbjct: 489 GWGLKTFLDLLEDRIYNLSRSN 510 >gi|83747953|ref|ZP_00944984.1| HflX [Ralstonia solanacearum UW551] gi|207723170|ref|YP_002253569.1| gtpase protein [Ralstonia solanacearum MolK2] gi|207743437|ref|YP_002259829.1| gtpase protein [Ralstonia solanacearum IPO1609] gi|83725371|gb|EAP72518.1| HflX [Ralstonia solanacearum UW551] gi|206588364|emb|CAQ35327.1| gtpase protein [Ralstonia solanacearum MolK2] gi|206594834|emb|CAQ61761.1| gtpase protein [Ralstonia solanacearum IPO1609] Length = 429 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST ++T+A+ A+ F TL + + EG +L+D G I++ Sbjct: 216 VSLVGYTNAGKSTLFNALTKARAYAANQLFATLDTTSRRLYLEGLGNVVLSDTVGFIRDL 275 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 Q L+ T VLLH+V A Sbjct: 276 PTQLVAAFRATLEETVHADVLLHVVDA 302 >gi|300854433|ref|YP_003779417.1| putative GTP-binding protein [Clostridium ljungdahlii DSM 13528] gi|300434548|gb|ADK14315.1| putative GTP-binding protein [Clostridium ljungdahlii DSM 13528] Length = 438 Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 17/174 (9%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IG PN GKS+ + + + ++D P TT ++ Y + +L D G+ K + Sbjct: 179 VAFIGKPNVGKSSLINKLLGEERVIVSDIPGTTRDAVDSYLETDYGKLLLIDTAGLRKKS 238 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 I R ER V + I+ A+ N+ + I+ Y EL K I ++ Sbjct: 239 KVKEEIERYSVIRTYTAIERADVCVLILDAV-HNISEQDEKII----GYAHELSKSIMVI 293 Query: 277 GLSQIDTVDSD--TLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D D T+ + K E+ T +P+ S+ TG + ++L+ + + Sbjct: 294 -INKWDLIDKDTKTVDKYKTEIGTSLSFMPYAPYLFISAKTGQRVNKVLQLIKE 346 >gi|282881056|ref|ZP_06289744.1| GTP-binding protein YchF [Prevotella timonensis CRIS 5C-B1] gi|281305063|gb|EFA97135.1| GTP-binding protein YchF [Prevotella timonensis CRIS 5C-B1] Length = 363 Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust. Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 17/81 (20%) Query: 187 ADYPFTTLYPNLGIVK------EGYKEFI-----------LADIPGIIKNAHQGAGIGDR 229 + +PF T+ PN+G++ E + + DI G++K A +G G+G++ Sbjct: 26 SKFPFCTIEPNVGVITVPDERLTKLAEIVHPGRIVPATCEIVDIAGLVKGASKGEGLGNK 85 Query: 230 FLKHTERTHVLLHIVSALEEN 250 FL + L+H++ +++ Sbjct: 86 FLGNIRECDALIHVIRCFDDD 106 >gi|229592437|ref|YP_002874556.1| GTP-binding protein EngA [Pseudomonas fluorescens SBW25] gi|229364303|emb|CAY52040.1| GTP-binding protein [Pseudomonas fluorescens SBW25] Length = 493 Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 11/170 (6%) Query: 154 LKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILAD 212 ++ +++ I ++G PN GKST +TR + I D T G K + +I+ D Sbjct: 1 MESRMVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVD 60 Query: 213 IPGIIKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 GI + H + ++ L E V+L +V A +A Y D++ + R Sbjct: 61 TGGISGDEHGMDEKMAEQSLLAIEEADVVLFLVDA-----RAGYTA-ADQMIGEHLRKRN 114 Query: 272 KIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 K + ++ID +D + AR + +P + G GI Q+LE Sbjct: 115 KRSYLVANKIDNIDPEQ-ARAEFSPMGLGDAIP--VAGAHGRGITQMLEI 161 >gi|145298620|ref|YP_001141461.1| ferrous iron transport protein B [Aeromonas salmonicida subsp. salmonicida A449] gi|142851392|gb|ABO89713.1| ferrous iron transport protein B [Aeromonas salmonicida subsp. salmonicida A449] Length = 747 Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 15/148 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGA 224 +G PN+GK++ ++T A+ ++ ++ T+ +G ++ L D+PGI A+Q Sbjct: 8 VGNPNSGKTSLFNALTGARQQVGNWSGVTVDKKMGEFSAQGHDYKLMDLPGIYSLANQEG 67 Query: 225 G----IGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 I RF++ ++ +LL+++ A LE ++ Q L EL + K++I+ Sbjct: 68 SLDEQIASRFVQ-GQQPDLLLNVIDAANLERSLYLTLQ--LRELGLPMVVVLNKMDILQK 124 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFE 306 ++ T+D LA+ A C VP Sbjct: 125 RRV-TIDEALLAK-----ALGCPVVPLS 146 >gi|170288692|ref|YP_001738930.1| ferrous iron transport protein B [Thermotoga sp. RQ2] gi|170176195|gb|ACB09247.1| ferrous iron transport protein B [Thermotoga sp. RQ2] Length = 669 Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 23/181 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I + + G PN GK++ ++T K +A++P T+ G+ L D+PG Sbjct: 16 IVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKGYTINLIDLPGTYS 75 Query: 219 NAHQGAGIGDRFLKHTERTHVL-----LHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 + + R ++L L IV A N + + +L+ L E+ KK+ Sbjct: 76 LGYSSID------EKIARDYLLKGDADLVIVVADSVNPEQSLYLLLEIL-----EMEKKV 124 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILECLHDKIFSIRGE 332 I+ ++ ID + + EL G +P F SS+TG G LE L +KI + Sbjct: 125 -ILAMTAIDEAKKIGIKIDRYELQKHLG-IPVVFTSSVTGEG----LEELREKIVEYAQK 178 Query: 333 N 333 N Sbjct: 179 N 179 >gi|70728454|ref|YP_258203.1| GTP-binding protein Era [Pseudomonas fluorescens Pf-5] gi|123657841|sp|Q4KHT0|ERA_PSEF5 RecName: Full=GTPase Era gi|68342753|gb|AAY90359.1| GTP-binding protein Era [Pseudomonas fluorescens Pf-5] Length = 300 Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ K+ Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGAIQAIYVDTPGMHKSN 71 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 72 EKAL---NRYMNKT 82 >gi|282877359|ref|ZP_06286183.1| GTP-binding protein YchF [Prevotella buccalis ATCC 35310] gi|281300544|gb|EFA92889.1| GTP-binding protein YchF [Prevotella buccalis ATCC 35310] Length = 363 Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust. Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 17/81 (20%) Query: 187 ADYPFTTLYPNLGIVK------EGYKEFI-----------LADIPGIIKNAHQGAGIGDR 229 + +PF T+ PN+G++ E + + DI G++K A +G G+G++ Sbjct: 26 SKFPFCTIEPNVGVITVPDERLTKLAEIVHPGRIVPATCEIVDIAGLVKGASKGEGLGNK 85 Query: 230 FLKHTERTHVLLHIVSALEEN 250 FL + L+H++ +++ Sbjct: 86 FLGNIRECDALIHVIRCFDDD 106 >gi|167562556|ref|ZP_02355472.1| GTP-binding protein HflX [Burkholderia oklahomensis EO147] gi|167569738|ref|ZP_02362612.1| GTP-binding protein HflX [Burkholderia oklahomensis C6786] Length = 392 Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 198 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 257 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 258 LPHQLVAAFRATLEETIHADLLLHVVDA 285 >gi|303273690|ref|XP_003056198.1| predicted protein [Micromonas pusilla CCMP1545] gi|226462282|gb|EEH59574.1| predicted protein [Micromonas pusilla CCMP1545] Length = 500 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 16/56 (28%), Positives = 33/56 (58%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + ++G PN GKS+ + ++ P++++YPFTT +G + ++ D PG++ Sbjct: 318 VALVGAPNVGKSSLVRVLSSGTPEVSNYPFTTRGIKMGHLFIENDRVLVTDTPGLL 373 >gi|156937792|ref|YP_001435588.1| small GTP-binding protein [Ignicoccus hospitalis KIN4/I] gi|156566776|gb|ABU82181.1| small GTP-binding protein [Ignicoccus hospitalis KIN4/I] Length = 671 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 18/166 (10%) Query: 161 DIGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGY--KEFILADIPGII 217 I ++G PN GKSTF+ + + ++A++P T+ ++ I+K Y KE + D PG+ Sbjct: 4 SIAVVGQPNVGKSTFINVLIGKYVSEVANWPGVTV--DIKIIKIEYDGKEVCIYDFPGMY 61 Query: 218 K---NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 + + +RF+ H+ + ++L+ + Q + EL+ K Sbjct: 62 SLNPTSEEERIAAERFVTEDFDNHIAIADSTSLKRTLYLVVQSL---------ELKGK-G 111 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 +V LS+ D + L + G FSS T G+ ++LE Sbjct: 112 VVALSKTDAALKAGIHINVGLLEKKLGFPVIPFSSYTLEGVEEVLE 157 >gi|78066576|ref|YP_369345.1| small GTP-binding protein [Burkholderia sp. 383] gi|77967321|gb|ABB08701.1| GTP-binding protein HflX [Burkholderia sp. 383] Length = 396 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 198 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 257 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 258 LPHQLVAAFRATLEETIHADLLLHVVDA 285 >gi|42784011|ref|NP_981258.1| ferrous iron transport protein B [Bacillus cereus ATCC 10987] gi|42739941|gb|AAS43866.1| ferrous iron transport protein B [Bacillus cereus ATCC 10987] Length = 662 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 17/167 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 4 VALLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--KQGTLIDLPGVYDLNP 61 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + G+ +FL TE H +L+IV S E N+ Q + E K + I G Sbjct: 62 VSRDEGVVTKFL-LTEEFHHMLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-G 110 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 L+ ID + L+ G + +G G ++L L + Sbjct: 111 LNMIDVAKQRGIVIDVKRLSELLGVTVVPVVARSGKGCEELLATLKE 157 >gi|331085407|ref|ZP_08334492.1| ferrous iron transporter B [Lachnospiraceae bacterium 9_1_43BFAA] gi|330407645|gb|EGG87143.1| ferrous iron transporter B [Lachnospiraceae bacterium 9_1_43BFAA] Length = 727 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K G+K+ ++ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLK-GHKDVVIMDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ER +L+IV + +E N+ + Q + EL + ++ + Sbjct: 64 YTLEEVVARNYLIGERPDAILNIVDGTNIERNLYLSTQLM---------ELGIPV-VMAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + ID ++ + EL+ + G E S++ G GI + E Sbjct: 114 NMIDVLEKNGDRIHIQELSKKLGCEVVEISALKGTGIKKAAE 155 >gi|330836926|ref|YP_004411567.1| ferrous iron transport protein B [Spirochaeta coccoides DSM 17374] gi|329748829|gb|AEC02185.1| ferrous iron transport protein B [Spirochaeta coccoides DSM 17374] Length = 718 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 14/166 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 + + G PN+GK+T +T + + ++P T+ G +K G KEF++ D+PGI + Sbjct: 4 VALAGNPNSGKTTLFNELTGSSQHVGNWPGVTVEKKDGYIK-GNKEFVVVDLPGIYSLSP 62 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R + ++++IV A ++ N+ Q + L IV L Sbjct: 63 YSAEEVVSRNYLIGDEADLIVNIVDATNMDRNLYLTTQLLETGLPM----------IVAL 112 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 + D V +L Q G S+ TG G+ ++ + + Sbjct: 113 NMYDLVKKRKTVIDVKKLEKQLGCPVVPISAATGEGMKDLVSRIKE 158 >gi|163846033|ref|YP_001634077.1| GTP-binding proten HflX [Chloroflexus aurantiacus J-10-fl] gi|222523761|ref|YP_002568231.1| GTP-binding proten HflX [Chloroflexus sp. Y-400-fl] gi|163667322|gb|ABY33688.1| GTP-binding proten HflX [Chloroflexus aurantiacus J-10-fl] gi|222447640|gb|ACM51906.1| GTP-binding proten HflX [Chloroflexus sp. Y-400-fl] Length = 445 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 24/188 (12%) Query: 146 LGQEKIIWLKLKL------------------IADIGIIGLPNAGKSTFLASVTRAKPKIA 187 L + +I WLK +L I I ++G NAGKST L ++T A Sbjct: 186 LIERRIAWLKDQLADVHRHRELYRQRRRQTGIPVIALVGYTNAGKSTLLNAMTGADVLAE 245 Query: 188 DYPFTTLYPNL-GIVKEGYKEFILADIPGII-KNAHQGAGIGDRFLKHTERTHVLLHIVS 245 D F TL P ++ G ++ D G I K Q L+ E +LLH+V Sbjct: 246 DKLFATLDPTTRQVLLPGNIVALMTDTVGFIQKLPPQLVAAFRATLEEIEEADLLLHVVD 305 Query: 246 ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 N Q Q + L + + + + L++ID ++ T A ++A + G +P Sbjct: 306 VTHRNAQEHAQTVEQTLRELGVDHKPVLTV--LNKIDLLEGAT-AEDVGQIAAEMG-LPT 361 Query: 306 EFSSITGH 313 + +++ Sbjct: 362 DIVAVSAQ 369 >gi|156973661|ref|YP_001444568.1| hypothetical protein VIBHAR_01364 [Vibrio harveyi ATCC BAA-1116] gi|156525255|gb|ABU70341.1| hypothetical protein VIBHAR_01364 [Vibrio harveyi ATCC BAA-1116] Length = 758 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 17/172 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I +G PN+GK+T +T AK ++ ++ T+ G K EF+L D+PGI + + Sbjct: 5 ILTVGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGQYKHAGDEFLLTDLPGIYSLDS 64 Query: 220 AHQGAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + I + TH +++++V A LE ++ Q L EL + Sbjct: 65 GNDSNSIDESIASRAVLTHPADLIINVVDATSLERSLYMTLQ--LRELG--------RPM 114 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 IV L+++D + + EL G S+ + + E LH + Sbjct: 115 IVVLNKMDALKRERQVINVAELEKTLGCPVVSLSATNKGQVAEFKEKLHKSV 166 >gi|237745517|ref|ZP_04575997.1| HflX GTP-binding protein [Oxalobacter formigenes HOxBLS] gi|229376868|gb|EEO26959.1| HflX GTP-binding protein [Oxalobacter formigenes HOxBLS] Length = 379 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST ++T+A AD F TL + I E +++D G I+ Sbjct: 193 LSLVGYTNAGKSTLFNAMTKAGTYAADQLFATLDTTSRRIYLESVGNVVVSDTVGFIREL 252 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 253 PHQLVAAFRATLEETIHADLLLHVVDA 279 >gi|171321329|ref|ZP_02910288.1| GTP-binding proten HflX [Burkholderia ambifaria MEX-5] gi|171093386|gb|EDT38574.1| GTP-binding proten HflX [Burkholderia ambifaria MEX-5] Length = 396 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 198 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 257 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 258 LPHQLVAAFRATLEETIHADLLLHVVDA 285 >gi|77359684|ref|YP_339259.1| GTP-binding protein Era [Pseudoalteromonas haloplanktis TAC125] gi|76874595|emb|CAI85816.1| GTP-binding protein era [Pseudoalteromonas haloplanktis TAC125] Length = 310 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +GI EG + + D PG+ Sbjct: 21 IAIVGRPNVGKSTLLNKIIEQKVSITSRKPQTTRHRIMGIHTEGKHQAVYVDTPGL 76 >gi|323526572|ref|YP_004228725.1| GTP-binding proten HflX [Burkholderia sp. CCGE1001] gi|323383574|gb|ADX55665.1| GTP-binding proten HflX [Burkholderia sp. CCGE1001] Length = 395 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 198 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRE 257 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 258 LPHQLVAAFRATLEETIHADLLLHVVDA 285 >gi|6655023|gb|AAD02940.2| GTP-binding protein Era [Bradyrhizobium japonicum] Length = 309 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 41/184 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGI---- 216 + +IG PN GKST + ++ AK I T + GIV E + IL D PGI Sbjct: 18 VALIGAPNVGKSTLVNALVGAKVTIVSRKVQTTRALIRGIVIENNAQIILVDTPGIFSPK 77 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 + A GA D VLL + ++E +A IL + ++ N + Sbjct: 78 RRLDRAMVSTAWSGAHDADLVC-------VLLDAKTGIDEEAEA----ILAKAASVNHD- 125 Query: 270 RKKIEIVGLSQIDTVDSD---TLARKKNELATQCGQVPFE----FSSITGHGIPQILECL 322 +I+ ++++D V + LA+ NE ++PF ++I+G G+ + L Sbjct: 126 ----KILVINKVDLVQREKLLALAQAANE------RMPFAKTFMIAAISGDGVDDLRSTL 175 Query: 323 HDKI 326 + + Sbjct: 176 AEMV 179 >gi|83720345|ref|YP_442761.1| GTP-binding protein HflX [Burkholderia thailandensis E264] gi|83654170|gb|ABC38233.1| GTP-binding protein HflX [Burkholderia thailandensis E264] Length = 392 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 198 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 257 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 258 LPHQLVAAFRATLEETIHADLLLHVVDA 285 >gi|332284647|ref|YP_004416558.1| GTP-binding protein [Pusillimonas sp. T7-7] gi|330428600|gb|AEC19934.1| GTP-binding protein [Pusillimonas sp. T7-7] Length = 365 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + ++G NAGKST ++TRA AD F TL V EG + +++D G I++ Sbjct: 192 VSLVGYTNAGKSTLFNALTRAGAYAADQLFATLDTTTRRVWIEGAGQVVISDTVGFIRDL 251 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSA 246 R L+ T + +LLH+V A Sbjct: 252 PPTLIAAFRATLEETVQADLLLHVVDA 278 >gi|329904164|ref|ZP_08273694.1| GTP-binding protein HflX [Oxalobacteraceae bacterium IMCC9480] gi|327548120|gb|EGF32838.1| GTP-binding protein HflX [Oxalobacteraceae bacterium IMCC9480] Length = 373 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 2/91 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKN- 219 + ++G NAGKST ++ +A+ AD F TL V G +L+D G I+ Sbjct: 192 VSLVGYTNAGKSTLFNTMCKARVYAADQLFATLDTTSRRVYMGDAGNVVLSDTVGFIREL 251 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 HQ L+ T +LLH+V A N Sbjct: 252 PHQLVAAFRATLEETVHADLLLHVVDAASPN 282 >gi|294463173|gb|ADE77123.1| unknown [Picea sitchensis] Length = 433 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 13/102 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGII--- 217 + ++G PN GKST L + K I D P TT + LG+ + +L D PG+I Sbjct: 138 VAVVGKPNVGKSTLLNQMIGQKLSIVTDKPQTTRHRILGLCSAPDYQMVLYDTPGVIQKE 197 Query: 218 ---------KNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 KN H G D L + V + EE+ Sbjct: 198 MHKLDAMMMKNVHSATGNADCVLTVVDVCKVPEKVNDLFEED 239 >gi|226492268|ref|NP_001142481.1| hypothetical protein LOC100274701 [Zea mays] gi|195604910|gb|ACG24285.1| hypothetical protein [Zea mays] Length = 594 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 22/106 (20%) Query: 146 LGQEKIIWL--------KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN 197 LG E +I L +LKL +GI+GLPN GKS+ + S+ R++ + Sbjct: 244 LGAENLIKLLKNYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSR-------VVNVGST 296 Query: 198 LGIVKEGY-----KEFILADIPGII--KNAHQGAGIGDRFLKHTER 236 GI + K+ L D PG++ K+++ G + R K E+ Sbjct: 297 PGITRSMQEVQLDKKVKLLDCPGVVMLKSSNSGVSVALRNCKRVEK 342 >gi|170702833|ref|ZP_02893682.1| GTP-binding proten HflX [Burkholderia ambifaria IOP40-10] gi|170132251|gb|EDT00730.1| GTP-binding proten HflX [Burkholderia ambifaria IOP40-10] Length = 396 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 198 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 257 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 258 LPHQLVAAFRATLEETIHADLLLHVVDA 285 >gi|163740177|ref|ZP_02147571.1| GTP-binding protein Era [Phaeobacter gallaeciensis 2.10] gi|161386035|gb|EDQ10410.1| GTP-binding protein Era [Phaeobacter gallaeciensis 2.10] Length = 301 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 + +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGESQIVFVDTPGLFQ 65 >gi|25028389|ref|NP_738443.1| putative GTP-binding protein HflX [Corynebacterium efficiens YS-314] gi|259507446|ref|ZP_05750346.1| GTP-binding protein [Corynebacterium efficiens YS-314] gi|23493674|dbj|BAC18643.1| putative GTP-binding protein HflX [Corynebacterium efficiens YS-314] gi|259164934|gb|EEW49488.1| GTP-binding protein [Corynebacterium efficiens YS-314] Length = 535 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 19/170 (11%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPG 215 L+ I I G NAGKS+ + ++T A + D F TL P + +G + + D G Sbjct: 293 LVPQIAIAGYTNAGKSSLINAMTGAGVLVEDALFATLDPTTRKAELADG-RHVVFTDTVG 351 Query: 216 IIKNAHQGAGIGDRF---LKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSE 268 I+ H + + F L+ ++LH+V + + ++A I D + Sbjct: 352 FIR--HLPTSLVEAFKSTLEEVLEADLMLHVVDGSDPFPLKQIEAVNSVISDIIRTTGET 409 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 EI+ +++ID D TLA EL V F S++TG GI ++ Sbjct: 410 --PPPEIIVVNKIDQADPLTLA----ELRHALDDVVF-VSALTGEGIKEL 452 >gi|302391816|ref|YP_003827636.1| ribosome-associated GTPase EngA [Acetohalobium arabaticum DSM 5501] gi|302203893|gb|ADL12571.1| ribosome-associated GTPase EngA [Acetohalobium arabaticum DSM 5501] Length = 438 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 17/173 (9%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I +IG PN GKS+ + S+ + + + D P TT + G +F++ D G+ K + Sbjct: 180 ISVIGRPNVGKSSLVNSILGKERVIVNDVPGTTRDAIDTYFEVGDNQFVIIDTAGMRKRS 239 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 AGI R LK +R+ V L ++ A + Q D+ A + + K ++ Sbjct: 240 KVEAGIEKYSVIRSLKAVDRSDVALMVLDATQGITQQ------DKKIAGYAHDQGKAMVI 293 Query: 277 GLSQIDTVDSDTL--ARKKNEL---ATQCGQVPFEF-SSITGHGIPQILECLH 323 +++ D + +T R +E+ A+ P F S++TG + +IL+ + Sbjct: 294 AVNKWDLIKKETNIDQRYADEIRYEASFINYAPITFVSALTGQRVLEILDIVE 346 >gi|229062502|ref|ZP_04199815.1| Ferrous iron transport protein B [Bacillus cereus AH603] gi|228716785|gb|EEL68476.1| Ferrous iron transport protein B [Bacillus cereus AH603] Length = 657 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 17/166 (10%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAH 221 ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 1 MLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--KQGTLIDLPGVYDLNPVS 58 Query: 222 QGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + G+ FL T+ H +L+IV S E N+ Q + E K + I GL+ Sbjct: 59 RDEGVVTNFL-LTDEFHHMLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-GLN 107 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDK 325 ID + L+ G + +G G ++L LH++ Sbjct: 108 MIDVAKQRGIVINVKRLSEILGVTVVPVVARSGKGCEELLATLHEE 153 >gi|189218239|ref|YP_001938881.1| GTP-binding protein protease modulator [Methylacidiphilum infernorum V4] gi|189185097|gb|ACD82282.1| GTP-binding protein protease modulator [Methylacidiphilum infernorum V4] Length = 432 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 16/173 (9%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE--GYKEFILADIPGII-KNA 220 ++G NAGKST +T A + D F TL P + + + GYK F L+D G I K Sbjct: 204 LVGYTNAGKSTLFNRLTNAHVLVEDKLFATLDPTIRLFEFSGGYKIF-LSDTVGFIQKLP 262 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 H L+ +L+H+V E +L+++ A + K I+ Sbjct: 263 HHLIESFKATLEEVTEADLLIHLVDVSHPWAETQINEVNKVLEQIGAIH-----KPTILV 317 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 ++ID V++ L +++ E G VP S+ TG G +L + + + S R Sbjct: 318 WNKIDLVNTSGLIKRRIE--EYPGSVP--ISAATGFGCENLLVKIEEWLKSQR 366 >gi|221135074|ref|ZP_03561377.1| GTP-binding protein Era [Glaciecola sp. HTCC2999] Length = 303 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +GI EG K+ I D PG+ Sbjct: 14 IAIVGRPNVGKSTILNRLIGQKVSITSRKPQTTRHRIMGIDSEGDKQAIYVDTPGL 69 >gi|167581712|ref|ZP_02374586.1| GTP-binding protein HflX [Burkholderia thailandensis TXDOH] gi|167619828|ref|ZP_02388459.1| GTP-binding protein HflX [Burkholderia thailandensis Bt4] gi|257138971|ref|ZP_05587233.1| GTP-binding protein HflX [Burkholderia thailandensis E264] Length = 387 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 193 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 252 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 253 LPHQLVAAFRATLEETIHADLLLHVVDA 280 >gi|161524642|ref|YP_001579654.1| GTP-binding proten HflX [Burkholderia multivorans ATCC 17616] gi|189350602|ref|YP_001946230.1| GTP-binding protein [Burkholderia multivorans ATCC 17616] gi|221198074|ref|ZP_03571120.1| GTP-binding protein HflX [Burkholderia multivorans CGD2M] gi|221204368|ref|ZP_03577385.1| GTP-binding protein HflX [Burkholderia multivorans CGD2] gi|160342071|gb|ABX15157.1| GTP-binding proten HflX [Burkholderia multivorans ATCC 17616] gi|189334624|dbj|BAG43694.1| GTP-binding protein [Burkholderia multivorans ATCC 17616] gi|221175225|gb|EEE07655.1| GTP-binding protein HflX [Burkholderia multivorans CGD2] gi|221182006|gb|EEE14407.1| GTP-binding protein HflX [Burkholderia multivorans CGD2M] Length = 396 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 198 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 257 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 258 LPHQLVAAFRATLEETIHADLLLHVVDA 285 >gi|29832138|ref|NP_826772.1| GTP-binding protein Era [Streptomyces avermitilis MA-4680] gi|29609256|dbj|BAC73307.1| putative GTP-binding protein Era/ThdF family [Streptomyces avermitilis MA-4680] Length = 330 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 11/150 (7%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I A+ P TT + GIV + IL D PG+ K Sbjct: 37 VGRPNAGKSTLTNALVGQKVAITANQPQTTRHTVRGIVHRPDAQLILVDTPGLHKPR--- 93 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ E + + I EL++ ++K +I +++ Sbjct: 94 TLLGERLNDIVRTTWAEVDVIGFCLPANEKLGPGDRFIAKELAS----IKKTPKIAIVTK 149 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEFSSI 310 D VD TLA + + ++ FE++ I Sbjct: 150 TDLVDGKTLAEQLIAIDQLGQELGFEWAEI 179 >gi|297539846|ref|YP_003675615.1| GTP-binding proten HflX [Methylotenera sp. 301] gi|297259193|gb|ADI31038.1| GTP-binding proten HflX [Methylotenera sp. 301] Length = 450 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 2/90 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 IA I ++G NAGKST + ++T ++ +A+ F TL + + E +++D G I Sbjct: 221 IAGIALVGYTNAGKSTLMRALTGSEVLVANKLFATLDTTVRSLYPESVPRILVSDTVGFI 280 Query: 218 KNAHQG-AGIGDRFLKHTERTHVLLHIVSA 246 KN G L +LLH++ A Sbjct: 281 KNLPHGLVASFKSTLDEALDASLLLHVIDA 310 >gi|207340569|gb|EDZ68879.1| YPL093Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 342 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 28/54 (51%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I G PN GKS+FL +T++ + Y FTT +G Y F D PGI+ Sbjct: 172 ICGYPNVGKSSFLRCITKSDVDVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGIL 225 >gi|167836403|ref|ZP_02463286.1| GTP-binding protein HflX [Burkholderia thailandensis MSMB43] Length = 392 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 198 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 257 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 258 LPHQLVAAFRATLEETIHADLLLHVVDA 285 >gi|163738239|ref|ZP_02145655.1| GTP-binding protein Era [Phaeobacter gallaeciensis BS107] gi|161388855|gb|EDQ13208.1| GTP-binding protein era [Phaeobacter gallaeciensis BS107] Length = 301 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 + +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGESQIVFVDTPGLFQ 65 >gi|238792871|ref|ZP_04636501.1| Ferrous iron transport protein B [Yersinia intermedia ATCC 29909] gi|238727725|gb|EEQ19249.1| Ferrous iron transport protein B [Yersinia intermedia ATCC 29909] Length = 771 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 17/164 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 IG+IG PNAGK+T +T A+ ++ ++ T+ G + L D+PG + Sbjct: 6 IGLIGNPNAGKTTLFNQLTGARQRVGNWAGVTVERKEGHFTTAQHQVTLVDLPGTYSLTT 65 Query: 220 AHQGAGIGDRFLKH---TERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + + ++ H + +L++++ A LE N+ Q + EL Sbjct: 66 ISEQTSLDEQIACHYILSGEADLLINVIDAVNLERNLYLTLQLV---------ELGIPC- 115 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 IV L+ +D S + N L+ Q G S G GI ++ Sbjct: 116 IVALNMLDIAKSQHIDIDINALSQQLGCPVIPLVSTRGQGINEL 159 >gi|315656846|ref|ZP_07909733.1| GTP-binding protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492801|gb|EFU82405.1| GTP-binding protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 524 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 18/175 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 I + I+G NAGKS+ L + A + D F TL P++ EG +E+ LAD G Sbjct: 287 IPAVAIVGYTNAGKSSLLNRLAGANLLVHDALFATLDPSVRRAHTPEG-REYTLADTVGF 345 Query: 217 IKNAHQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE- 274 ++ R L+ T ++LH+V + A + L EL + IE Sbjct: 346 VRRLPTELVEAFRSTLEETAMADLILHVVDGSNPDPMAQVAAVDATL-----ELVEGIEE 400 Query: 275 ---IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID + LA ++ L + S+ TG GI + + + D++ Sbjct: 401 IPVMMVVNKIDQASAPALALLRHSLPEA-----YYVSARTGKGIEALQQSIADRL 450 >gi|237755977|ref|ZP_04584563.1| GTP-binding protein HflX [Sulfurihydrogenibium yellowstonense SS-5] gi|237691860|gb|EEP60882.1| GTP-binding protein HflX [Sulfurihydrogenibium yellowstonense SS-5] Length = 372 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 9/131 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGI 216 I + ++G NAGKS+ L +T+ I+D F TL ++ + K+ ++ D G Sbjct: 193 ILKVSLVGYTNAGKSSLLKRLTKRDVFISDQLFATLDTKTSLIYFPDIEKKVLITDTVGF 252 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 +++ + I D F LK E V+LH++ ++N + + L +L+ K Sbjct: 253 VEDM--PSEIMDAFMTTLKEIEDADVILHVIDISDKNWMKKKTTVENVLKQL--KLQDKP 308 Query: 274 EIVGLSQIDTV 284 I ++ID V Sbjct: 309 TITVFNKIDKV 319 >gi|163786092|ref|ZP_02180540.1| putative GTP-binding protein [Flavobacteriales bacterium ALC-1] gi|159877952|gb|EDP72008.1| putative GTP-binding protein [Flavobacteriales bacterium ALC-1] Length = 293 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + K I TT + LGIV + IL+D PGIIK A Sbjct: 7 VNIIGNPNVGKSTLMNAFIGEKLSIITSKAQTTRHRILGIVNGDDFQVILSDTPGIIKPA 66 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIV 244 ++ F+K E VL+++V Sbjct: 67 YELQTSMMDFVKSAFEDADVLIYMV 91 >gi|154499901|ref|ZP_02037939.1| hypothetical protein BACCAP_03558 [Bacteroides capillosus ATCC 29799] gi|150271499|gb|EDM98756.1| hypothetical protein BACCAP_03558 [Bacteroides capillosus ATCC 29799] Length = 793 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 14/156 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K G+K+ ++ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNALTGSSQYVGNWPGVTVEKKEGKLK-GHKDVVIQDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ +L+IV + +E N+ Q I EL + +V + Sbjct: 64 YTLEEVVARSYLVNEKPDAILNIVDGTNIERNLYLTTQLI---------ELGIPV-VVAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHG 314 + ID V + LA+ G E S++ G G Sbjct: 114 NMIDLVRKNGDKIDLVRLASALGCQVVEMSALKGEG 149 >gi|99082398|ref|YP_614552.1| GTP-binding protein Era [Ruegeria sp. TM1040] gi|99038678|gb|ABF65290.1| GTP-binding protein Era [Ruegeria sp. TM1040] Length = 301 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 I +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 8 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGDSQLVFVDTPGLFQ 65 >gi|66357174|ref|XP_625765.1| GNog1p. GTpase [Cryptosporidium parvum Iowa II] gi|46226984|gb|EAK87950.1| GNog1p. GTpase [Cryptosporidium parvum Iowa II] Length = 681 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 16/96 (16%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ V+ A ++ Y FTT +G Y + + D PGI+ Sbjct: 166 VCGYPNVGKSSFINCVSHANVEVEPYAFTTKSLYVGHFDYNYARWQVIDTPGIL------ 219 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL 259 DR L ER + + ++AL + CIL Sbjct: 220 ----DRPL--DERNTIEMTAITALAH----IHSCIL 245 >gi|299768754|ref|YP_003730780.1| GTP-binding proten HflX [Acinetobacter sp. DR1] gi|298698842|gb|ADI89407.1| GTP-binding proten HflX [Acinetobacter sp. DR1] Length = 447 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 7/126 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST + ++ AD F TL P L ++ +G +LAD G + Sbjct: 199 IPTVSLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLADTVGFV 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELR--K 271 +N H L+ T +LLH++ + ++ A + +L E+ A LR Sbjct: 259 RNLQHDLIESFKATLEETLEATLLLHVIDSNSHDMLDQIEAVEGVLKEIGADAPVLRVYN 318 Query: 272 KIEIVG 277 KI++ G Sbjct: 319 KIDLSG 324 >gi|91784201|ref|YP_559407.1| small GTP-binding protein [Burkholderia xenovorans LB400] gi|296158986|ref|ZP_06841814.1| GTP-binding proten HflX [Burkholderia sp. Ch1-1] gi|91688155|gb|ABE31355.1| GTP-binding protein HflX [Burkholderia xenovorans LB400] gi|295890861|gb|EFG70651.1| GTP-binding proten HflX [Burkholderia sp. Ch1-1] Length = 404 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 207 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRE 266 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 267 LPHQLVAAFRATLEETIHADLLLHVVDA 294 >gi|115436636|ref|NP_001043076.1| Os01g0375000 [Oryza sativa Japonica Group] gi|54290761|dbj|BAD61382.1| putative nucleostemin [Oryza sativa Japonica Group] gi|54290764|dbj|BAD61385.1| putative nucleostemin [Oryza sativa Japonica Group] gi|113532607|dbj|BAF04990.1| Os01g0375000 [Oryza sativa Japonica Group] gi|222618471|gb|EEE54603.1| hypothetical protein OsJ_01830 [Oryza sativa Japonica Group] Length = 591 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 25/128 (19%) Query: 124 GFGNAHFKSSTNQAPYYANPGILGQEKIIWL--------KLKLIADIGIIGLPNAGKSTF 175 G+ ++ S+N P ++ LG E +I L +LKL +GI+GLPN GKS+ Sbjct: 228 GWKSSKIDKSSN-IPQSSD--CLGAENLIKLLKNYSRSHELKLAITVGIVGLPNVGKSSL 284 Query: 176 LASVTRAKPKIADYPFTTLYPNLGIVKEGY-----KEFILADIPGII--KNAHQGAGIGD 228 + S+ R++ + G+ + K+ L D PG++ K+++ G + Sbjct: 285 INSLKRSR-------VVNVGSTPGVTRSMQEVQLDKKVKLLDCPGVVMLKSSNSGVSVAL 337 Query: 229 RFLKHTER 236 R K E+ Sbjct: 338 RNCKRVEK 345 >gi|53719153|ref|YP_108139.1| putative GTP-binding protein [Burkholderia pseudomallei K96243] gi|76812111|ref|YP_333744.1| GTP-binding protein HflX [Burkholderia pseudomallei 1710b] gi|52209567|emb|CAH35520.1| putative GTP-binding protein [Burkholderia pseudomallei K96243] gi|76581564|gb|ABA51039.1| GTP-binding protein HflX [Burkholderia pseudomallei 1710b] Length = 392 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 198 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 257 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 258 LPHQLVAAFRATLEETIHADLLLHVVDA 285 >gi|53723536|ref|YP_102999.1| GTP-binding protein HflX [Burkholderia mallei ATCC 23344] gi|67639878|ref|ZP_00438707.1| GTP-binding proten HflX [Burkholderia mallei GB8 horse 4] gi|254199944|ref|ZP_04906310.1| GTP-binding protein HflX [Burkholderia mallei FMH] gi|254206277|ref|ZP_04912629.1| GTP-binding protein HflX [Burkholderia mallei JHU] gi|52426959|gb|AAU47552.1| GTP-binding protein HflX [Burkholderia mallei ATCC 23344] gi|147749540|gb|EDK56614.1| GTP-binding protein HflX [Burkholderia mallei FMH] gi|147753720|gb|EDK60785.1| GTP-binding protein HflX [Burkholderia mallei JHU] gi|238520488|gb|EEP83947.1| GTP-binding proten HflX [Burkholderia mallei GB8 horse 4] Length = 387 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 193 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 252 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 253 LPHQLVAAFRATLEETIHADLLLHVVDA 280 >gi|302386875|ref|YP_003822697.1| GTP-binding proten HflX [Clostridium saccharolyticum WM1] gi|302197503|gb|ADL05074.1| GTP-binding proten HflX [Clostridium saccharolyticum WM1] Length = 423 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 14/165 (8%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP---NLGIVKEGYKEFILADIPGIIKN 219 I+G NAGKST L +T A D F TL P NL + G ++ +L D G I+ Sbjct: 205 AIVGYTNAGKSTLLNRLTDAGILAEDKLFATLDPTTRNLSL--PGGQQILLTDTVGFIRK 262 Query: 220 A-HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 H L+ + + ++LH+V + + + L + KI I Sbjct: 263 LPHHLIEAFKSTLEEAKYSDIILHVVDCSNPQMDMQMYVVYETLRELG--ICDKIMITVF 320 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 ++ID D+ + R + QV S+ TG G+ +++ L Sbjct: 321 NKIDAADAGVILRD----VSSDHQV--RISAKTGEGLDELINLLE 359 >gi|153835434|ref|ZP_01988101.1| ferrous iron transport protein B [Vibrio harveyi HY01] gi|148868024|gb|EDL67211.1| ferrous iron transport protein B [Vibrio harveyi HY01] Length = 758 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 17/172 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I +G PN+GK+T +T AK ++ ++ T+ G K EF+L D+PGI + + Sbjct: 5 ILTVGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGQYKHAGDEFLLTDLPGIYSLDS 64 Query: 220 AHQGAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + I + TH +++++V A LE ++ Q L EL + Sbjct: 65 GNDSNSIDESIASRAVLTHPADLIINVVDATSLERSLYMTLQ--LRELG--------RPM 114 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 IV L+++D + + EL G S+ + + E LH + Sbjct: 115 IVVLNKMDALKRERQVINVAELEKTLGCPVVSLSATNRGQVAEFKEKLHKSV 166 >gi|121599988|ref|YP_993147.1| GTP-binding protein HflX [Burkholderia mallei SAVP1] gi|124386447|ref|YP_001026077.1| GTP-binding protein HflX [Burkholderia mallei NCTC 10229] gi|126448989|ref|YP_001080654.1| GTP-binding protein HflX [Burkholderia mallei NCTC 10247] gi|167002236|ref|ZP_02268026.1| GTP-binding protein HflX [Burkholderia mallei PRL-20] gi|167719275|ref|ZP_02402511.1| GTP-binding protein HflX [Burkholderia pseudomallei DM98] gi|167815461|ref|ZP_02447141.1| GTP-binding protein HflX [Burkholderia pseudomallei 91] gi|167845412|ref|ZP_02470920.1| GTP-binding protein HflX [Burkholderia pseudomallei B7210] gi|167902404|ref|ZP_02489609.1| GTP-binding protein HflX [Burkholderia pseudomallei NCTC 13177] gi|167910646|ref|ZP_02497737.1| GTP-binding protein HflX [Burkholderia pseudomallei 112] gi|254177706|ref|ZP_04884361.1| GTP-binding protein HflX [Burkholderia mallei ATCC 10399] gi|254189052|ref|ZP_04895563.1| GTP-binding proten HflX [Burkholderia pseudomallei Pasteur 52237] gi|254197755|ref|ZP_04904177.1| GTP-binding protein HflX [Burkholderia pseudomallei S13] gi|254259963|ref|ZP_04951017.1| GTP-binding protein HflX [Burkholderia pseudomallei 1710a] gi|254297434|ref|ZP_04964887.1| GTP-binding protein HflX [Burkholderia pseudomallei 406e] gi|254358308|ref|ZP_04974581.1| GTP-binding protein HflX [Burkholderia mallei 2002721280] gi|121228798|gb|ABM51316.1| GTP-binding protein HflX [Burkholderia mallei SAVP1] gi|124294467|gb|ABN03736.1| GTP-binding protein HflX [Burkholderia mallei NCTC 10229] gi|126241859|gb|ABO04952.1| GTP-binding protein HflX [Burkholderia mallei NCTC 10247] gi|148027435|gb|EDK85456.1| GTP-binding protein HflX [Burkholderia mallei 2002721280] gi|157806974|gb|EDO84144.1| GTP-binding protein HflX [Burkholderia pseudomallei 406e] gi|157936731|gb|EDO92401.1| GTP-binding proten HflX [Burkholderia pseudomallei Pasteur 52237] gi|160698745|gb|EDP88715.1| GTP-binding protein HflX [Burkholderia mallei ATCC 10399] gi|169654496|gb|EDS87189.1| GTP-binding protein HflX [Burkholderia pseudomallei S13] gi|243062053|gb|EES44239.1| GTP-binding protein HflX [Burkholderia mallei PRL-20] gi|254218652|gb|EET08036.1| GTP-binding protein HflX [Burkholderia pseudomallei 1710a] Length = 387 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 193 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 252 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 253 LPHQLVAAFRATLEETIHADLLLHVVDA 280 >gi|188997222|ref|YP_001931473.1| GTP-binding protein HflX [Sulfurihydrogenibium sp. YO3AOP1] gi|188932289|gb|ACD66919.1| GTP-binding protein HflX [Sulfurihydrogenibium sp. YO3AOP1] Length = 372 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 9/131 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGI 216 I + ++G NAGKS+ L +T+ I+D F TL ++ + K+ ++ D G Sbjct: 193 ILKVSLVGYTNAGKSSLLKRLTKRDVFISDQLFATLDTKTSLIYFPDIKKKVLITDTVGF 252 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 +++ + I D F LK E V+LH++ ++N + + L +L+ K Sbjct: 253 VEDM--PSEIMDAFMTTLKEIEDADVILHVIDISDKNCMKKKTTVENVLKQL--KLQDKP 308 Query: 274 EIVGLSQIDTV 284 I ++ID V Sbjct: 309 IITVFNKIDKV 319 >gi|168028909|ref|XP_001766969.1| predicted protein [Physcomitrella patens subsp. patens] gi|162681711|gb|EDQ68135.1| predicted protein [Physcomitrella patens subsp. patens] Length = 517 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 16/128 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA- 220 + +IG P+ GKST L +T + + A Y FTTL GI+ + L D+PGII+ Sbjct: 95 VALIGFPSVGKSTLLTLLTGTQSEAAAYEFTTLTCIPGIIHYNDAKIQLLDLPGIIEVPL 154 Query: 221 -HQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSE-----LR 270 + + FL H ER H+ +++ V + +L L A SE L Sbjct: 155 IKPRPHLKNGFLCHNNFSEERLHLGFQVIA-----VAKSSDVVLMVLDASKSEGHRQILT 209 Query: 271 KKIEIVGL 278 +++E VGL Sbjct: 210 RELEAVGL 217 >gi|187924512|ref|YP_001896154.1| GTP-binding proten HflX [Burkholderia phytofirmans PsJN] gi|187715706|gb|ACD16930.1| GTP-binding proten HflX [Burkholderia phytofirmans PsJN] Length = 404 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 207 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRE 266 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 267 LPHQLVAAFRATLEETIHADLLLHVVDA 294 >gi|146296963|ref|YP_001180734.1| GTP-binding protein Era [Caldicellulosiruptor saccharolyticus DSM 8903] gi|189037251|sp|A4XKV8|ERA_CALS8 RecName: Full=GTPase Era gi|145410539|gb|ABP67543.1| GTP-binding protein Era [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 300 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%) Query: 162 IGIIGLPNAGKSTFLAS-VTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PN GKST + V + I+ P TT GI+ + I D PG+ Sbjct: 8 VALIGRPNVGKSTLMNYFVGKKISIISPKPQTTRNSIKGILTLDDAQIIFIDTPGVHPPK 67 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ +G+ +K +E+T ++L+IV A++ + + IL++L + +I+ Sbjct: 68 NK---LGEYMVKVSEKTLKEVDLILYIVEAIDSGIGPWDEAILEKLKEVQTP-----KIL 119 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEF----SSITGHGIPQILE 320 L++ D + + K+ + G++ FEF ++I G+ +LE Sbjct: 120 VLNKADLASKENIEILKSLFS---GRLSFEFIIEIAAINGYNCDVLLE 164 >gi|115351795|ref|YP_773634.1| small GTP-binding protein [Burkholderia ambifaria AMMD] gi|115281783|gb|ABI87300.1| GTP-binding protein HflX [Burkholderia ambifaria AMMD] Length = 396 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 198 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 257 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 258 LPHQLVAAFRATLEETIHADLLLHVVDA 285 >gi|262038068|ref|ZP_06011473.1| GTP-binding protein Era [Leptotrichia goodfellowii F0264] gi|261747888|gb|EEY35322.1| GTP-binding protein Era [Leptotrichia goodfellowii F0264] Length = 304 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I+G PN GKST + + + K I +D TT GIV G ++I D PGI K Sbjct: 13 IAIVGRPNVGKSTLMNKLVKEKVAIVSDKAGTTRDQIKGIVNIGENQYIFVDTPGIHKPK 72 Query: 221 H 221 H Sbjct: 73 H 73 >gi|167738272|ref|ZP_02411046.1| GTP-binding protein HflX [Burkholderia pseudomallei 14] Length = 387 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 193 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 252 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 253 LPHQLVAAFRATLEETIHADLLLHVVDA 280 >gi|126451860|ref|YP_001066485.1| GTP-binding proten HflX [Burkholderia pseudomallei 1106a] gi|134278019|ref|ZP_01764734.1| GTP-binding protein HflX [Burkholderia pseudomallei 305] gi|167823873|ref|ZP_02455344.1| GTP-binding proten HflX [Burkholderia pseudomallei 9] gi|167893954|ref|ZP_02481356.1| GTP-binding proten HflX [Burkholderia pseudomallei 7894] gi|167918675|ref|ZP_02505766.1| GTP-binding proten HflX [Burkholderia pseudomallei BCC215] gi|217421633|ref|ZP_03453137.1| GTP-binding protein HflX [Burkholderia pseudomallei 576] gi|226197101|ref|ZP_03792678.1| GTP-binding protein HflX [Burkholderia pseudomallei Pakistan 9] gi|237812542|ref|YP_002896993.1| GTP-binding protein HflX [Burkholderia pseudomallei MSHR346] gi|242318079|ref|ZP_04817095.1| GTP-binding protein HflX [Burkholderia pseudomallei 1106b] gi|254179558|ref|ZP_04886157.1| GTP-binding protein HflX [Burkholderia pseudomallei 1655] gi|126225502|gb|ABN89042.1| GTP-binding protein HflX [Burkholderia pseudomallei 1106a] gi|134251669|gb|EBA51748.1| GTP-binding protein HflX [Burkholderia pseudomallei 305] gi|184210098|gb|EDU07141.1| GTP-binding protein HflX [Burkholderia pseudomallei 1655] gi|217395375|gb|EEC35393.1| GTP-binding protein HflX [Burkholderia pseudomallei 576] gi|225930480|gb|EEH26490.1| GTP-binding protein HflX [Burkholderia pseudomallei Pakistan 9] gi|237504760|gb|ACQ97078.1| GTP-binding protein HflX [Burkholderia pseudomallei MSHR346] gi|242141318|gb|EES27720.1| GTP-binding protein HflX [Burkholderia pseudomallei 1106b] Length = 387 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 193 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEVGQIVVSDTVGFIRE 252 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 253 LPHQLVAAFRATLEETIHADLLLHVVDA 280 >gi|71902193|ref|ZP_00684209.1| Small GTP-binding protein domain [Xylella fastidiosa Ann-1] gi|71728048|gb|EAO30257.1| Small GTP-binding protein domain [Xylella fastidiosa Ann-1] Length = 450 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 1/89 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + I ++G N+GKST ++T A AD F TL P + + +LAD G ++ Sbjct: 198 VPRIALVGYTNSGKSTLFNALTGASAYTADQLFATLDPKVRRIVLPGSSAMLADTVGFVR 257 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSA 246 + H+ L +LLH++ A Sbjct: 258 HLPHELVAAFRSTLSEAREADLLLHVIDA 286 >gi|329117153|ref|ZP_08245870.1| ribosome biogenesis GTPase Era [Streptococcus parauberis NCFD 2020] gi|326907558|gb|EGE54472.1| ribosome biogenesis GTPase Era [Streptococcus parauberis NCFD 2020] Length = 299 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T ++ +V A +E I++ L + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVETVIFMVPA-DEKRGKGDDMIIERLKTAKIPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++E L D + Sbjct: 119 VINKIDKVHPDQLLEQIDDFRNQMDFKEVVP--ISALQGNNVNPLMEILKDNL 169 >gi|288958024|ref|YP_003448365.1| GTP-binding protein [Azospirillum sp. B510] gi|288910332|dbj|BAI71821.1| GTP-binding protein [Azospirillum sp. B510] Length = 301 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIK 218 I ++G PNAGKST L ++ +K I TT LGI +G + I D PGI K Sbjct: 10 IALVGAPNAGKSTLLNAMIGSKVSIVSPKVQTTRTRVLGITIQGDAQMIFVDTPGIFK 67 >gi|163856337|ref|YP_001630635.1| GTP-binding protein HflX [Bordetella petrii DSM 12804] gi|163260065|emb|CAP42366.1| GTP-binding protein HflX [Bordetella petrii] Length = 368 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G NAGKST ++TRA AD F TL I EG +L+D G I++ Sbjct: 192 VSLVGYTNAGKSTLFNALTRAGAYAADQLFATLDTTTRRIWIEGTGSVVLSDTVGFIRDL 251 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSA 246 R L+ T +LLH+V A Sbjct: 252 PPNLIAAFRATLEETIHADLLLHVVDA 278 >gi|330965982|gb|EGH66242.1| GTP-binding protein HflX [Pseudomonas syringae pv. actinidiae str. M302091] Length = 433 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 2/112 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST SVT + A F TL P L ++ +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNSVTDSDVFAAGQLFATLDPTLRRLQLNDLGPIVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 ++ H+ L+ + + +LLH++ + E + + + ++ L +E Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDSHEPDRMSQIEQVMAVLGEIGAE 309 >gi|295676897|ref|YP_003605421.1| GTP-binding proten HflX [Burkholderia sp. CCGE1002] gi|295436740|gb|ADG15910.1| GTP-binding proten HflX [Burkholderia sp. CCGE1002] Length = 404 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 207 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRE 266 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 267 LPHQLVAAFRATLEETIHADLLLHVVDA 294 >gi|237802803|ref|YP_002887997.1| putative nucleotide-binding protein [Chlamydia trachomatis B/Jali20/OT] gi|237804725|ref|YP_002888879.1| putative nucleotide-binding protein [Chlamydia trachomatis B/TZ1A828/OT] gi|231273025|emb|CAX09938.1| putative nucleotide-binding protein [Chlamydia trachomatis B/TZ1A828/OT] gi|231274037|emb|CAX10831.1| putative nucleotide-binding protein [Chlamydia trachomatis B/Jali20/OT] Length = 447 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 16/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I +IG N+GKST L +T A + F TL P V + +L D G I Sbjct: 226 IPTFALIGYTNSGKSTLLNLLTSADTYAENKLFATLDPKTRRCVLPCGQRVLLTDTVGFI 285 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 + H L+ + +LLH+V A + E+V+ + IL EL ++ Sbjct: 286 RKLPHTLVAAFKSTLEAALQEDILLHVVDASHPLVLEHVETT-KAILQELGITQPQV--- 341 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I L+++D V A + ++ P S+ TG GI ++L + D + Sbjct: 342 --ITVLNKMDKVADGVTASRLRLMSPN----PVCVSAKTGEGIRELLRSMEDMV 389 >gi|158424703|ref|YP_001525995.1| GTP-binding protein [Azorhizobium caulinodans ORS 571] gi|158331592|dbj|BAF89077.1| GTP-binding protein [Azorhizobium caulinodans ORS 571] Length = 459 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 18/180 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST +T+A+ D F TL P L V + IL+D G I Sbjct: 225 VALVGYTNAGKSTLFNRLTQAEVMAQDLLFATLDPTLRAVDLPHGTRVILSDTVGFISEL 284 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDEL------SAYNSELR 270 Q L+ V+LH+ +S + + QAA + +L EL E+ Sbjct: 285 PTQLVAAFRATLEEVIEADVILHVRDISHPDTDAQAADVKDVLTELGIDVEAGGRLVEVW 344 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 KI+I+ ++ + + +T AR + E P S++TG G P +L+ + + + R Sbjct: 345 NKIDILPEAEREQL-LNTAARAEPEAR------PELVSALTGEGAPALLDRIEAHVTAGR 397 >gi|300780720|ref|ZP_07090574.1| GTP-binding protein Era [Corynebacterium genitalium ATCC 33030] gi|300532427|gb|EFK53488.1| GTP-binding protein Era [Corynebacterium genitalium ATCC 33030] Length = 350 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + +G PN GKST ++ K I AD P TT +P GIV + +L D PG+ Sbjct: 52 VSFVGRPNTGKSTLTNALVGEKIAIMADQPETTRHPIRGIVNRPDAQIVLVDTPGL 107 >gi|225010005|ref|ZP_03700477.1| GTP-binding protein Era [Flavobacteria bacterium MS024-3C] gi|225005484|gb|EEG43434.1| GTP-binding protein Era [Flavobacteria bacterium MS024-3C] Length = 295 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 2/93 (2%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + A V I TT + LGIV + IL+D PGIIK A Sbjct: 9 VNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGEDFQMILSDTPGIIKPA 68 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQ 252 ++ F+K E +L+++V E+ ++ Sbjct: 69 YELQASMMDFVKSAFEDADILVYMVELGEKTLK 101 >gi|170694785|ref|ZP_02885936.1| GTP-binding proten HflX [Burkholderia graminis C4D1M] gi|170140416|gb|EDT08593.1| GTP-binding proten HflX [Burkholderia graminis C4D1M] Length = 404 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 207 VSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRE 266 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 267 LPHQLVAAFRATLEETIHADLLLHVVDA 294 >gi|150010993|gb|ABR57154.1| GTP-binding protein Era [Staphylococcus xylosus] Length = 299 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 19/169 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I IIG PN GKSTF+ V K I +D TT G++ + + I D PGI K Sbjct: 9 ISIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQEDAQIIFLDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD ++ T ++ +V+ + E++ + I++ L + + + Sbjct: 69 HK---LGDYMMRVATNTLSEIDAIMFMVN-VNEDIGRGDEYIMEMLKTIKTPI-----FL 119 Query: 277 GLSQIDTVDSDTLA---RKKNELATQCGQVPFEFSSITGHGIPQILECL 322 L++ID V D L K VP S++ GH + + L Sbjct: 120 VLNKIDLVHPDELMPRIEKYKRYLDFTEIVP--ISALEGHNVDHFINVL 166 >gi|125525991|gb|EAY74105.1| hypothetical protein OsI_01991 [Oryza sativa Indica Group] Length = 591 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 25/128 (19%) Query: 124 GFGNAHFKSSTNQAPYYANPGILGQEKIIWL--------KLKLIADIGIIGLPNAGKSTF 175 G+ ++ S+N P ++ LG E +I L +LKL +GI+GLPN GKS+ Sbjct: 228 GWKSSKIDKSSN-IPQSSD--CLGAENLIKLLKNYSRSHELKLAITVGIVGLPNVGKSSL 284 Query: 176 LASVTRAKPKIADYPFTTLYPNLGIVKEGY-----KEFILADIPGII--KNAHQGAGIGD 228 + S+ R++ + G+ + K+ L D PG++ K+++ G + Sbjct: 285 INSLKRSR-------VVNVGSTPGVTRSMQEVQLDKKVKLLDCPGVVMLKSSNSGVSVAL 337 Query: 229 RFLKHTER 236 R K E+ Sbjct: 338 RNCKRVEK 345 >gi|76789109|ref|YP_328195.1| GTP-binding protein [Chlamydia trachomatis A/HAR-13] gi|76167639|gb|AAX50647.1| HflX [Chlamydia trachomatis A/HAR-13] Length = 447 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 16/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I +IG N+GKST L +T A + F TL P V + +L D G I Sbjct: 226 IPTFALIGYTNSGKSTLLNLLTSADTYAENKLFATLDPKTRRCVLPCGQRVLLTDTVGFI 285 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKK 272 + H L+ + +LLH+V A + E+V+ + IL EL ++ Sbjct: 286 RKLPHTLVAAFKSTLEAALQEDILLHVVDASHPLVLEHVETT-KAILQELGITQPQV--- 341 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I L+++D V A + ++ P S+ TG GI ++L + D + Sbjct: 342 --ITVLNKMDKVADGVTASRLRLMSPN----PVCVSAKTGEGIRELLRSMEDMV 389 >gi|34498987|ref|NP_903202.1| GTP-binding protein hflX [Chromobacterium violaceum ATCC 12472] gi|34104837|gb|AAQ61194.1| GTP-binding protein hflX [Chromobacterium violaceum ATCC 12472] Length = 376 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 12/172 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGII 217 ++ + I+G NAGKST ++T+A AD F TL + + +L+D G I Sbjct: 197 VSSVSIVGYTNAGKSTLFNALTKANIYAADQLFATLDTTSRKLFLNHDCSVVLSDTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ H L+ T + ++LLH+V E A +DE++ +E I+ Sbjct: 257 RDLPHTLVAAFRATLEETVQANLLLHVVDCANETRDAQ----IDEVNKVLAE----IDAD 308 Query: 277 GLSQIDTVDSDTLARKKNELATQCG--QVPFEFSSITGHGIPQILECLHDKI 326 G+ Q+ + L E+ V S++ G G+ + E + +++ Sbjct: 309 GIPQLIVWNKGDLRELPPEIERDEDGVAVAVRVSALKGEGLELLREAIAERV 360 >gi|86135728|ref|ZP_01054307.1| GTP-binding protein Era [Roseobacter sp. MED193] gi|85826602|gb|EAQ46798.1| GTP-binding protein Era [Roseobacter sp. MED193] Length = 301 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 + +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARVRGVAMEGESQIVFVDTPGLFQ 65 >gi|85708366|ref|ZP_01039432.1| GTPase [Erythrobacter sp. NAP1] gi|85689900|gb|EAQ29903.1| GTPase [Erythrobacter sp. NAP1] Length = 302 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 17/172 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST + + K I TT LGI G + IL D PGI Sbjct: 13 VAVIGAPNAGKSTLVNQLVGQKVAITSAKAQTTRARMLGIALHGSVQMILVDTPGIFAPK 72 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + + + E +L IV +++ E R + +I+ L+ Sbjct: 73 RRLDRAMVSAAWEGAESADAVLLIVDPIKQRRHELEP------LLEALEQRSERKILVLN 126 Query: 280 QIDTVDSDTLARKKNELATQCGQ-VPFE----FSSITGHGIPQILECLHDKI 326 ++D + L ELA + Q + FE S+++G G+ ++ E L +++ Sbjct: 127 KVDKAKKEPLL----ELAQEMSQRIDFEEIFFVSALSGDGVAEMKEALAEQM 174 >gi|320010904|gb|ADW05754.1| GTP-binding protein Era [Streptomyces flavogriseus ATCC 33331] Length = 339 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 11/150 (7%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I ++ P TT + GIV + IL D PG+ K Sbjct: 28 VGRPNAGKSTLTNALVGQKVAITSNRPQTTRHTVRGIVHRDDAQLILVDTPGLHKPR--- 84 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ ++ + + I+ EL+ ++K +I +++ Sbjct: 85 TLLGERLNDVVRTTWAEVDVIGFCLPADQKLGPGDKFIVKELAG----IKKTPKIAIITK 140 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEFSSI 310 D V+S LA + ++ ++ FE++ I Sbjct: 141 TDLVESKALAEQLLAVSALADELGFEWAEI 170 >gi|163733861|ref|ZP_02141303.1| GTP-binding protein Era [Roseobacter litoralis Och 149] gi|161392972|gb|EDQ17299.1| GTP-binding protein Era [Roseobacter litoralis Och 149] Length = 302 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 + +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGESQIVFVDTPGLFE 65 >gi|145341451|ref|XP_001415822.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144576045|gb|ABO94114.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 290 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 33/60 (55%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G PN GKS+ + ++ P++ +YPFTT +G + ++ D PG+I + Sbjct: 166 VALVGAPNVGKSSLVRVLSSGLPEVCNYPFTTKGIKMGHFFVDDERHVVTDTPGLINRSE 225 >gi|119471906|ref|ZP_01614214.1| GTP-binding protein era [Alteromonadales bacterium TW-7] gi|119445279|gb|EAW26569.1| GTP-binding protein era [Alteromonadales bacterium TW-7] Length = 310 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +GI EG + + D PG+ Sbjct: 21 IAIVGRPNVGKSTLLNEIIEQKVSITSRKPQTTRHRIMGIHTEGKHQAVYVDTPGL 76 >gi|82701580|ref|YP_411146.1| small GTP-binding protein domain-containing protein [Nitrosospira multiformis ATCC 25196] gi|82409645|gb|ABB73754.1| GTP-binding protein HflX [Nitrosospira multiformis ATCC 25196] Length = 394 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 6/96 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL---YPNLGIVKEGYKEFILADIPG 215 + + ++G NAGKST +TR +AD F TL L I G +L+D G Sbjct: 205 VMSVSLVGYTNAGKSTLFNRLTRGHTYVADQLFATLDATTRKLFIADRG--PLVLSDTVG 262 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 I++ H L+ T + +LLH+V N Sbjct: 263 FIRDLPHTLVAAFRATLEETVQADLLLHVVDTSSSN 298 >gi|121534215|ref|ZP_01666040.1| GTP-binding protein Era [Thermosinus carboxydivorans Nor1] gi|121307318|gb|EAX48235.1| GTP-binding protein Era [Thermosinus carboxydivorans Nor1] Length = 298 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 9/107 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PN GKST + S+ K I +D P TT L ++ + + D PGI K Sbjct: 12 VAVIGRPNVGKSTLVNSLVGQKIAIMSDKPQTTRNRILCVLTLDDAQILFIDTPGIHKPK 71 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELS 263 H+ +G+ ++ E T V+L +V A E A Q IL+ L+ Sbjct: 72 HR---LGEYMVQAAETTLREVDVILFVVDATAEK-GAGEQYILERLA 114 >gi|325285624|ref|YP_004261414.1| GTP-binding protein Era-like-protein [Cellulophaga lytica DSM 7489] gi|324321078|gb|ADY28543.1| GTP-binding protein Era-like-protein [Cellulophaga lytica DSM 7489] Length = 294 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + A V I TT + LGIV + IL+D PGIIK A Sbjct: 8 VNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGDDFQVILSDTPGIIKPA 67 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIV 244 ++ F+K E +L+++V Sbjct: 68 YELQSSMMDFVKTAFEDADILIYMV 92 >gi|254787455|ref|YP_003074884.1| GTP-binding proten HflX [Teredinibacter turnerae T7901] gi|237686849|gb|ACR14113.1| GTP-binding proten HflX [Teredinibacter turnerae T7901] Length = 444 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 9/114 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL---GIVKEGYKEFILADIPG 215 I + ++G NAGKST ++T A D F TL P + G+ G +LAD G Sbjct: 198 IPTVSLVGYTNAGKSTLFNAITDAGVFAQDQLFATLDPTMRRIGLPDVGPA--VLADTVG 255 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQ---CILDELSAY 265 I N H+ L+ + +LLH++ A ++ Q + +L+E+ A+ Sbjct: 256 FISNLPHRLVESFRATLEEASSSDLLLHVIDAADDERQRNIEQVNLVLEEIDAH 309 >gi|169630125|ref|YP_001703774.1| GTP-binding protein HflX [Mycobacterium abscessus ATCC 19977] gi|169242092|emb|CAM63120.1| Probable GTP-binding protein HflX [Mycobacterium abscessus] Length = 464 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 17/176 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I+G NAGKS+ L ++T A + D F TL P G +G +EF++ D G Sbjct: 243 VPSVAIVGYTNAGKSSLLNAITGAGVLVQDALFATLEPTTRRGTFDDG-REFVITDTVGF 301 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELR 270 ++ H + + F L+ +L+H+V + A A + ++ E+ A + + Sbjct: 302 VR--HLPTQLVEAFRSTLEEVADADLLVHVVDGSDMAPLAQIEAVRTVIGEVVA-DHDAS 358 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E++ ++++D LA+ + L S+ TG GI + E + + + Sbjct: 359 AAPELLVINKVDAAGDLALAQLRRALPK-----ALFVSAHTGEGIATLREAIAEAV 409 >gi|28210676|ref|NP_781620.1| ferrous iron transport protein B [Clostridium tetani E88] gi|28203114|gb|AAO35557.1| ferrous iron transport protein B [Clostridium tetani E88] Length = 587 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 23/181 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI--LADIPGI--I 217 + ++G PN GK++ ++T + + ++ T+ KEGY + + + D+PGI + Sbjct: 4 VALVGNPNVGKTSLFNALTGSNQYVGNWAGVTVEK-----KEGYIDNLVKIVDLPGIYAM 58 Query: 218 KNAHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEI 275 + +L TE V+L+I A LE N+ YQ E +K I I Sbjct: 59 DTYSNEEKVSKNYL-STENIDVILNIADASNLERNLYLTYQL---------KEFKKPI-I 107 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS-IRGENE 334 + L+ +D V+ + L+ + S+ GI ++ E L FS I +NE Sbjct: 108 LLLNMMDIVEEKNIKIDLELLSRELNVKVIPISASKNMGIDKLKETLKVSNFSDINIDNE 167 Query: 335 F 335 F Sbjct: 168 F 168 >gi|328868362|gb|EGG16740.1| nucleolar GTP-binding protein 1 [Dictyostelium fasciculatum] Length = 680 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + G PN GKS+F+ +TRA + Y FTT +G Y + + D PGI+ Sbjct: 173 MCGYPNVGKSSFMNKMTRANVDVQPYAFTTKSLFVGHTDYKYNIWQVIDTPGIL 226 >gi|312127389|ref|YP_003992263.1| small gtp-binding protein [Caldicellulosiruptor hydrothermalis 108] gi|311777408|gb|ADQ06894.1| small GTP-binding protein [Caldicellulosiruptor hydrothermalis 108] Length = 607 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 21/170 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I ++G PN GKS +T ++++YP TT+ N G YK++++ D PG+ I + Sbjct: 19 IALVGNPNVGKSVIFNKLTGRYVEVSNYPGTTVDVNYGF----YKDYVIVDTPGVYGISS 74 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + + + +T++ ++++V + L+ ++ Q I Y E+ IV Sbjct: 75 FNDEEIVTRDIVLNTQK---IINVVDSVHLDRDLFLTQQLI-----DYQKEV-----IVV 121 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 L+ +D V+ + + +L G S+ G GI ++ E + +F Sbjct: 122 LNMVDEVEKNNIKIDIEKLKESLGVEVIATSASKGIGIDKLREAIDKNLF 171 >gi|270291317|ref|ZP_06197539.1| GTP-binding protein Era [Pediococcus acidilactici 7_4] gi|304385067|ref|ZP_07367413.1| GTP-binding protein Era [Pediococcus acidilactici DSM 20284] gi|270280163|gb|EFA25999.1| GTP-binding protein Era [Pediococcus acidilactici 7_4] gi|304329261|gb|EFL96481.1| GTP-binding protein Era [Pediococcus acidilactici DSM 20284] Length = 304 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 2/65 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D P TT GI ++ + D PGI K A Sbjct: 13 VAIVGRPNVGKSTFLNYVVGQKVAIMSDVPQTTRNKIQGIYTTDREQIVFIDTPGIHK-A 71 Query: 221 HQGAG 225 H G Sbjct: 72 HNKLG 76 >gi|237804088|ref|ZP_04591673.1| GTP-binding protein YchF [Pseudomonas syringae pv. oryzae str. 1_6] gi|331026069|gb|EGI06125.1| GTP-binding protein YchF [Pseudomonas syringae pv. oryzae str. 1_6] Length = 50 Score = 40.4 bits (93), Expect = 0.42, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 25/38 (65%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV 201 ++G PN GKST ++T++ ++PF T+ PN GIV Sbjct: 1 MVGRPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIV 38 >gi|27380171|ref|NP_771700.1| GTP-binding protein Era [Bradyrhizobium japonicum USDA 110] gi|30178619|sp|O69162|ERA_BRAJA RecName: Full=GTPase Era gi|27353325|dbj|BAC50325.1| GTP-binding protein Era [Bradyrhizobium japonicum USDA 110] Length = 308 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 41/184 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGI---- 216 + +IG PN GKST + ++ AK I T + GIV E + IL D PGI Sbjct: 18 VALIGAPNVGKSTLVNALVGAKVTIVSRKVQTTRALIRGIVIENNAQIILVDTPGIFSPK 77 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 + A GA D VLL + ++E +A IL + ++ N + Sbjct: 78 RRLDRAMVSTAWSGAHDADLVC-------VLLDAKTGIDEEAEA----ILAKAASVNHD- 125 Query: 270 RKKIEIVGLSQIDTVDSD---TLARKKNELATQCGQVPFE----FSSITGHGIPQILECL 322 +I+ ++++D V + LA+ NE ++PF ++I+G G+ + L Sbjct: 126 ----KILVINKVDLVQREKLLALAQAANE------RMPFAKTFMIAAISGDGVDDLRSTL 175 Query: 323 HDKI 326 + + Sbjct: 176 AEMV 179 >gi|256396152|ref|YP_003117716.1| GTP-binding protein Era [Catenulispora acidiphila DSM 44928] gi|256362378|gb|ACU75875.1| GTP-binding protein Era [Catenulispora acidiphila DSM 44928] Length = 375 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 7/148 (4%) Query: 165 IGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIK-NAHQ 222 +G PNAGKST SV AK I P TT + GIV + +L D PG+ K Sbjct: 82 VGRPNAGKSTLTNSVVGAKVAITSGRPQTTRHTVRGIVHRDDAQLVLVDTPGLHKPRTLL 141 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 GA + D V+ V A +E + + I EL +++R+ +I L++ D Sbjct: 142 GARLNDEVRATWNEVDVIGFCVPA-DEKIGPGDRFIAAEL----AQVRRTPKIAILTKTD 196 Query: 283 TVDSDTLARKKNELATQCGQVPFEFSSI 310 + +A + L +V E++ + Sbjct: 197 KAAKEFIAEQLLALMELGREVGIEWAEV 224 >gi|222151146|ref|YP_002560300.1| hypothetical protein MCCL_0897 [Macrococcus caseolyticus JCSC5402] gi|222120269|dbj|BAH17604.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 425 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 30/181 (16%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGI 216 I + ++G NAGKST+ +++ + + D F TL P ++K EGY +L+D G Sbjct: 202 IFQVALVGYTNAGKSTWFNALSDSDTYMEDLLFATLDPKSKMMKLHEGYP-VLLSDTVGF 260 Query: 217 IKN--AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I+ H L+ + +L+H+V N Y +D + A EL Sbjct: 261 IQQLPTHLIEAFSST-LEEAKYADILIHVVDRSHPN----YMNHIDTVIALLKEL----- 310 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 +DT+ TL KK++L S +T G ++L + DK I +N+ Sbjct: 311 -----DMDTIPVLTLLNKKDKLE----------SFVTAAGKDELLVSVFDKQDKIHIQNK 355 Query: 335 F 335 Sbjct: 356 L 356 >gi|154800420|ref|NP_001075427.1| guanine nucleotide binding protein-like 3 (nucleolar)-like [Rattus norvegicus] Length = 577 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGY-KEFI-LADIPGIIK 218 +G++GLPN GKS+ + S+ R++ + P T + ++E Y +FI L D PGI+ Sbjct: 249 VGVVGLPNVGKSSLINSLKRSRACSVGAVPGVTKF-----MQEVYLDKFIRLLDAPGIVA 303 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + G R H ++ L V+ +E +Q +C L+E+S Y Sbjct: 304 GPNSEVGTILRNCIHVQK---LADPVTPVETILQ---RCNLEEISNY 344 >gi|15897212|ref|NP_341817.1| GTP-binding protein (hflX) [Sulfolobus solfataricus P2] gi|284174458|ref|ZP_06388427.1| GTP-binding protein (hflX) [Sulfolobus solfataricus 98/2] gi|13813407|gb|AAK40607.1| GTP-binding protein (hflX) [Sulfolobus solfataricus P2] gi|261601880|gb|ACX91483.1| GTP-binding proten HflX [Sulfolobus solfataricus 98/2] Length = 356 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 22/183 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I IGI+G N+GK++ S+T K+ FTT+ P + ++ +L D G I+ Sbjct: 179 IPSIGIVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMSPKRYAIPINNRKIMLVDTVGFIR 238 Query: 219 NAHQGAGIGDRF---LKHTERTHVLLHIVSA------LEENVQAAYQCILDELSAYNSEL 269 I D F L + + L+ ++ + L E +Q++++ IL E+ + Sbjct: 239 GI--PPQIVDAFFVTLSEAKYSDALILVIDSTFSENLLIETLQSSFE-ILREIGVSGKPI 295 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQI-LECLHDKI 326 +V L++ID ++ D KK +L + + + F I + + LE L DKI Sbjct: 296 -----LVTLNKIDKINGD--LYKKLDLVEKLSKELYSPIFDVIPISALKRTNLELLRDKI 348 Query: 327 FSI 329 + + Sbjct: 349 YQL 351 >gi|319946540|ref|ZP_08020775.1| GTP-binding protein Era [Streptococcus australis ATCC 700641] gi|319747286|gb|EFV99544.1| GTP-binding protein Era [Streptococcus australis ATCC 700641] Length = 299 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEARGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLAQIDDFRSQMDFKEIVP--ISALQGNNVSRLIDILSENL 169 >gi|260578248|ref|ZP_05846164.1| GTP-binding protein Era [Corynebacterium jeikeium ATCC 43734] gi|258603550|gb|EEW16811.1| GTP-binding protein Era [Corynebacterium jeikeium ATCC 43734] Length = 336 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 17/173 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +G PN GKST ++ K I AD P TT +P GIV + IL D PG+ + Sbjct: 47 VSFVGRPNTGKSTLTNALVGEKIAITADQPETTRHPIRGIVHREDAQIILVDTPGLHRPR 106 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVG 277 +G+R + + T+ + +++ +E + + I+D + + + K ++G Sbjct: 107 ---TLLGERLNEVVKETYSDVDVIAMCVPADEKIGPGDRWIVDAVRS----VAPKTPLIG 159 Query: 278 -LSQIDTVDSDTLARK---KNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++++D V D + + +EL VP SS + +L+ L D++ Sbjct: 160 VVTKLDKVSKDQVGAQLLALHELLDGADVVP--VSSTKQVQLDVLLDVLRDQL 210 >gi|229528906|ref|ZP_04418296.1| ferrous iron transport protein B [Vibrio cholerae 12129(1)] gi|229332680|gb|EEN98166.1| ferrous iron transport protein B [Vibrio cholerae 12129(1)] gi|327484610|gb|AEA79017.1| Ferrous iron transport protein B [Vibrio cholerae LMA3894-4] Length = 758 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 17/166 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G EF+L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGSFVHAGDEFLLTDLPGIYALDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH V++++V A LE ++ Q ELR+ + IV Sbjct: 68 SNSIDESIASRAVLTHPADVIINVVDATCLERSLYMTLQL---------RELRRPM-IVV 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 L+++D + + + +L G S+ + + E LH Sbjct: 118 LNKMDALKRERVHLDLKQLEAFLGCPVLALSANNKEQVRRFKEKLH 163 >gi|223975805|gb|ACN32090.1| unknown [Zea mays] Length = 594 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 22/106 (20%) Query: 146 LGQEKIIWL--------KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN 197 LG E +I L +LKL +GI+GLPN GKS+ + S+ R++ + Sbjct: 244 LGAENLIKLLKNYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSR-------VVNVGST 296 Query: 198 LGIVKEGY-----KEFILADIPGII--KNAHQGAGIGDRFLKHTER 236 GI + K+ L D PG++ K+++ G + R K E+ Sbjct: 297 PGITRSMQEVQLDKKVKLLDCPGVVMLKSSNSGVSVALRNCKKVEK 342 >gi|91225135|ref|ZP_01260357.1| GTP-binding protein EngA [Vibrio alginolyticus 12G01] gi|269965174|ref|ZP_06179308.1| GTP-binding protein [Vibrio alginolyticus 40B] gi|91190078|gb|EAS76349.1| GTP-binding protein EngA [Vibrio alginolyticus 12G01] gi|269830160|gb|EEZ84387.1| GTP-binding protein [Vibrio alginolyticus 40B] Length = 498 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 212 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRG 271 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK E +V+L ++ A E + L+A S ++ Sbjct: 272 RINETVEKFSVVKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRS------IVI 325 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +DSD K EL + G V F S++ G G+ + E + + Sbjct: 326 AVNKWDGLDSDVKESVKKELDRRLGFVDFARIHFISALHGTGVGHLFESIQE 377 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 14/167 (8%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYK-EFILADIPG 215 ++ + ++G PN GKST +TR + +AD+P T G + G + EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60 Query: 216 IIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 I +G + ++ L + V+L +V +A + ++A+ ++ K Sbjct: 61 -IDGTEEGVETKMAEQSLAAIDEADVVLFLVDG-----RAGLTPSDEAIAAHLRKIEKPA 114 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 +V +++ID +D+D +L ++ ++ G G+ +LE Sbjct: 115 MLV-VNKIDGIDADAACADFWQLGVDDM---YQIAAAHGRGVTALLE 157 >gi|319948153|ref|ZP_08022315.1| GTP-binding proten HflX [Dietzia cinnamea P4] gi|319438182|gb|EFV93140.1| GTP-binding proten HflX [Dietzia cinnamea P4] Length = 483 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 19/179 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + I I G NAGKS+ L +T A + + F TL P + +G + + D G Sbjct: 251 VPSIAIAGYTNAGKSSLLNRITGAGVLVQNALFATLDPTTRRADLPDG-RSVVFTDTVGF 309 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSEL 269 ++ H + + F L+ + +LLH+V + ++A + I + + N+E Sbjct: 310 VR--HLPTQLVEAFRSTLEEVVDSELLLHVVDGSDAFPLRQIEAVRKVINEVVEEQNAE- 366 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 + E+V +++ID D L EL F S+ TG G+ ++LE + + S Sbjct: 367 -RPRELVVINKIDAADPVVL----TELHHALPDAVF-VSAATGQGVDELLERIMQIVAS 419 >gi|326779457|ref|ZP_08238722.1| GTP-binding protein Era [Streptomyces cf. griseus XylebKG-1] gi|326659790|gb|EGE44636.1| GTP-binding protein Era [Streptomyces cf. griseus XylebKG-1] Length = 321 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 11/151 (7%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I ++ P TT + GIV + IL D PG+ K Sbjct: 28 VGRPNAGKSTLTNALVGQKVAITSNRPQTTRHTVRGIVHRDDAQLILVDTPGLHK---PR 84 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ ++ + + I+ EL+ +RK +I +++ Sbjct: 85 TLLGERLNDVVRTTWAEVDVIGFCLPADQKLGPGDKYIVKELAG----IRKTPKIAIITK 140 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEFSSIT 311 D V+S LA + ++ ++ FE++ I Sbjct: 141 TDLVESKALAEQLLAVSALAEELGFEWAEIV 171 >gi|167534804|ref|XP_001749077.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772501|gb|EDQ86152.1| predicted protein [Monosiga brevicollis MX1] Length = 675 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 30/54 (55%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + G PN GKS+F+ +TRA ++ Y FTT +G + + + D PGI+ Sbjct: 190 VTGFPNVGKSSFVNKITRADVEVQPYAFTTKSLFVGHTDYKHLRWQVIDTPGIL 243 >gi|149191124|ref|ZP_01869383.1| ferrous iron transport protein B [Vibrio shilonii AK1] gi|148835052|gb|EDL52030.1| ferrous iron transport protein B [Vibrio shilonii AK1] Length = 756 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 17/135 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I +G PN+GK+T +T AK ++ ++ T+ G +F L D+PGI + + Sbjct: 5 ILTVGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGQYHHAGDDFQLTDLPGIYALDS 64 Query: 220 AHQGAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQ---------CILDELSAY 265 + G I + TH +++++V A LE ++ Q +L+++ A Sbjct: 65 GNDGNSIDESIASRAVLTHPADLIINVVDATSLERSLYMTLQLRELGRPMVVVLNKMDAL 124 Query: 266 NSELRKKIEIVGLSQ 280 E R K++I GL + Sbjct: 125 KRE-RVKLDIAGLEK 138 >gi|68535678|ref|YP_250383.1| GTP-binding protein Era [Corynebacterium jeikeium K411] gi|68263277|emb|CAI36765.1| putative GTP-binding protein [Corynebacterium jeikeium K411] Length = 336 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 17/173 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +G PN GKST ++ K I AD P TT +P GIV + IL D PG+ + Sbjct: 47 VSFVGRPNTGKSTLTNALVGEKIAITADQPETTRHPIRGIVHREDAQIILVDTPGLHRPR 106 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVG 277 +G+R + + T+ + +++ +E + + I+D + + + K ++G Sbjct: 107 ---TLLGERLNEVVKETYSDVDVIAMCVPADEKIGPGDRWIVDAVRS----VAPKTPLIG 159 Query: 278 -LSQIDTVDSDTLARK---KNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++++D V D + + +EL VP SS + +L+ L D++ Sbjct: 160 VVTKLDKVSKDQVGAQLLALHELLDGADVVP--VSSTKQVQLDVLLDVLRDQL 210 >gi|260901280|ref|ZP_05909675.1| ferrous iron transport protein B [Vibrio parahaemolyticus AQ4037] gi|308109833|gb|EFO47373.1| ferrous iron transport protein B [Vibrio parahaemolyticus AQ4037] Length = 758 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 17/169 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G K EF+L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGQFKHAGDEFLLTDLPGIYSLDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH ++++++ A LE ++ Q EL + + +V Sbjct: 68 SNSIDESIASRAVLTHPADLIINVIDATSLERSLYMTLQL---------RELGRPMVVV- 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L+++D + + EL G S+ + + E LH I Sbjct: 118 LNKMDALKRERQMINIAELEKTLGCPVISLSATNKAQVAEFKEKLHKAI 166 >gi|254228662|ref|ZP_04922086.1| GTP-binding protein EngA [Vibrio sp. Ex25] gi|262395114|ref|YP_003286968.1| GTP-binding protein EngA [Vibrio sp. Ex25] gi|151938841|gb|EDN57675.1| GTP-binding protein EngA [Vibrio sp. Ex25] gi|262338708|gb|ACY52503.1| GTP-binding protein EngA [Vibrio sp. Ex25] Length = 498 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 212 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRG 271 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK E +V+L ++ A E + L+A S ++ Sbjct: 272 RINETVEKFSVVKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRS------IVI 325 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +DSD K EL + G V F S++ G G+ + E + + Sbjct: 326 AVNKWDGLDSDVKESVKKELDRRLGFVDFARIHFISALHGTGVGHLFESIQE 377 Score = 35.8 bits (81), Expect = 9.1, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYK-EFILADIPG 215 ++ + ++G PN GKST +TR + +AD+P T G + G + EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60 Query: 216 I 216 I Sbjct: 61 I 61 >gi|317009507|gb|ADU80087.1| GTP-binding protein Era [Helicobacter pylori India7] Length = 301 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 25/173 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYK-EFILADIPG 215 + +IG PNAGKST L ++ A + + + + KEGY+ + I D PG Sbjct: 8 VALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPG 67 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS--ELRKKI 273 + HQ ++ L + L + A ++ + D+L Y L +K Sbjct: 68 L---HHQ-----EKLLNQCMLSQALKAMGDA---ELRVFLASVHDDLKGYEEFLSLCQKP 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECL 322 I+ LS+IDT + +K E Q VP S+ + +LEC+ Sbjct: 117 HILALSKIDTATHKQVLQKLQEYQKYASQFLALVP--LSAKKSQNLNALLECI 167 >gi|226943498|ref|YP_002798571.1| GTP-binding protein Era [Azotobacter vinelandii DJ] gi|259645940|sp|C1DQS3|ERA_AZOVD RecName: Full=GTPase Era gi|226718425|gb|ACO77596.1| GTP-binding protein Era [Azotobacter vinelandii DJ] Length = 300 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ K Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGDVQAIYVDTPGLHK-- 69 Query: 221 HQGAGIGDRFLKHT 234 Q +R++ T Sbjct: 70 -QNDKALNRYMNKT 82 >gi|148265178|ref|YP_001231884.1| GTP-binding protein Era [Geobacter uraniireducens Rf4] gi|259645947|sp|A5G693|ERA_GEOUR RecName: Full=GTPase Era gi|146398678|gb|ABQ27311.1| GTP-binding protein Era [Geobacter uraniireducens Rf4] Length = 297 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 19/170 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 + IIG PN GKST L + K I +D P TT GI + + D PGI + Sbjct: 11 VSIIGRPNVGKSTLLNRILGDKIVITSDKPQTTRNRIQGIHNLPGCQMVFIDTPGIHRAK 70 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQ--CILDELSAYNSELRKKIEIVG 277 + + D L + V+L +V A + + A Q IL+ L+ ++ + ++ Sbjct: 71 SKLNKYMVDVALSSIKEVDVILFLVEA---DAKPANQEGMILELLANADAPV-----LLV 122 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLH 323 +++ID V + L + +A PF S+++G G+ +++E +H Sbjct: 123 INKIDLVAKEALLER---IAAYAALYPFREIVPVSALSGDGVERLVEVVH 169 >gi|317013934|gb|ADU81370.1| GTPase Era [Helicobacter pylori Gambia94/24] Length = 301 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 25/173 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYK-EFILADIPG 215 + +IG PNAGKST L ++ A + + + + KEGY+ + I D PG Sbjct: 8 VALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPG 67 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS--ELRKKI 273 + HQ ++ L + L + A ++ + D+L Y L +K Sbjct: 68 L---HHQ-----EKLLNQCMLSQALKAMGDA---ELRVFLASVHDDLKGYEEFLSLCQKP 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECL 322 I+ LS+IDT + +K E Q VP S+ + +LEC+ Sbjct: 117 HILALSKIDTATRKQVLQKLQEYQKYSSQFLDLVP--LSAKKSQNLNALLECI 167 >gi|301794107|emb|CBW36513.1| GTP-binding protein Era homolog [Streptococcus pneumoniae INV104] gi|332204972|gb|EGJ19037.1| GTP-binding protein Era [Streptococcus pneumoniae GA47901] Length = 299 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEARGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLSQIDDFRNQMDFKEIVP--ISALQGNNVSRLVDILSENL 169 >gi|197107124|pdb|2QTF|A Chain A, Crystal Structure Of A Gtp-Binding Protein From The Hyperthermophilic Archaeon Sulfolobus Solfataricus gi|197107125|pdb|2QTH|A Chain A, Crystal Structure Of A Gtp-Binding Protein From The Hyperthermophilic Archaeon Sulfolobus Solfataricus In Complex With Gdp gi|296863533|pdb|3KXI|A Chain A, Crystal Structure Of Ssgbp And Gdp Complex Length = 364 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 22/183 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I IGI+G N+GK++ S+T K+ FTT+ P + ++ +L D G I+ Sbjct: 179 IPSIGIVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMSPKRYAIPINNRKIMLVDTVGFIR 238 Query: 219 NAHQGAGIGDRF---LKHTERTHVLLHIVSA------LEENVQAAYQCILDELSAYNSEL 269 I D F L + + L+ ++ + L E +Q++++ IL E+ + Sbjct: 239 GI--PPQIVDAFFVTLSEAKYSDALILVIDSTFSENLLIETLQSSFE-ILREIGVSGKPI 295 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQI-LECLHDKI 326 +V L++ID ++ D KK +L + + + F I + + LE L DKI Sbjct: 296 -----LVTLNKIDKINGD--LYKKLDLVEKLSKELYSPIFDVIPISALKRTNLELLRDKI 348 Query: 327 FSI 329 + + Sbjct: 349 YQL 351 >gi|86607879|ref|YP_476641.1| GTP-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556421|gb|ABD01378.1| GTP-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 588 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 17/115 (14%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI--------L 210 I + ++G NAGKST L ++T A+ +AD F TL P ++ ++ + L Sbjct: 410 IPVVALVGYTNAGKSTLLNALTHAQVYVADQLFATLDPTTRRLELPDQQAVLLTDTVGFL 469 Query: 211 ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDEL 262 ++P + +A Q L+ LLH+V N + A + +LD+L Sbjct: 470 TELPDQLVDAFQAT------LEEVTEADALLHVVDLSHPNWEGQIEAVETLLDKL 518 >gi|28897632|ref|NP_797237.1| ferrous iron transport protein B [Vibrio parahaemolyticus RIMD 2210633] gi|153838590|ref|ZP_01991257.1| ferrous iron transport protein B [Vibrio parahaemolyticus AQ3810] gi|260365996|ref|ZP_05778481.1| ferrous iron transport protein B [Vibrio parahaemolyticus K5030] gi|260878215|ref|ZP_05890570.1| ferrous iron transport protein B [Vibrio parahaemolyticus AN-5034] gi|260895651|ref|ZP_05904147.1| ferrous iron transport protein B [Vibrio parahaemolyticus Peru-466] gi|28805844|dbj|BAC59121.1| ferrous iron transport protein B [Vibrio parahaemolyticus RIMD 2210633] gi|149748008|gb|EDM58867.1| ferrous iron transport protein B [Vibrio parahaemolyticus AQ3810] gi|308088180|gb|EFO37875.1| ferrous iron transport protein B [Vibrio parahaemolyticus Peru-466] gi|308090195|gb|EFO39890.1| ferrous iron transport protein B [Vibrio parahaemolyticus AN-5034] gi|308111266|gb|EFO48806.1| ferrous iron transport protein B [Vibrio parahaemolyticus K5030] Length = 758 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 17/169 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G K EF+L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGQFKHAGDEFLLTDLPGIYSLDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH ++++++ A LE ++ Q EL + + +V Sbjct: 68 SNSIDESIASRAVLTHPADLIINVIDATSLERSLYMTLQL---------RELGRPMVVV- 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L+++D + + EL G S+ + + E LH I Sbjct: 118 LNKMDALKRERQMINIAELEKTLGCPVISLSATNKAQVAEFKEKLHKAI 166 >gi|253996263|ref|YP_003048327.1| GTP-binding proten HflX [Methylotenera mobilis JLW8] gi|253982942|gb|ACT47800.1| GTP-binding proten HflX [Methylotenera mobilis JLW8] Length = 378 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 6/96 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGII 217 + + ++G NAGKST +T+A AD F TL I EG +L+D G I Sbjct: 201 VMTVSLVGYTNAGKSTIFNRLTKANIYAADQLFATLDTTTHKIYIEGCGSVVLSDTVGFI 260 Query: 218 KNAHQGAGIGDRF---LKHTERTHVLLHIVSALEEN 250 K H + + F L+ + +LLHIV N Sbjct: 261 K--HLPHALVEAFGATLEEAVQADLLLHIVDTASTN 294 >gi|238897953|ref|YP_002923633.1| putative GTP-binding protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259645880|sp|C4K4J2|DER_HAMD5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|229465711|gb|ACQ67485.1| putative GTP-binding protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 496 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 17/171 (9%) Query: 158 LIADIGIIGLPNAGKSTFLASVTR-AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I I +IG PN GKSTF +T+ A +AD+P T G + +FI+ D GI Sbjct: 1 MIPIIALIGRPNVGKSTFFNRLTQTANALVADFPGLTRDRQYGHAEIENHKFIIIDTGGI 60 Query: 217 IKNAHQGAGIGDRFLKH-----TERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 N +G + + H E V+L I+ A + A + A + RK Sbjct: 61 --NGIEGIENIQKHMTHQSFLAIEEADVVLFILDARAGLLPADLEI------AKHLRKRK 112 Query: 272 KIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 K + ++ID ++SDT LA G+V + ++ G G+ Q++ + Sbjct: 113 KATFLVANKIDGMNSDTALTDFYSLA--LGKV-YGIAASHGRGVAQLMSSV 160 Score = 35.8 bits (81), Expect = 8.3, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 17/173 (9%) Query: 162 IGIIGLPNAGKSTFLASV-TRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + + + + + D P TT + +E+I D G+ K+A Sbjct: 212 LAIVGRPNVGKSTLVNHILAQDRMLVYDIPGTTRDSIYIPLIRNNREYIFIDTAGVRKSA 271 Query: 221 HQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + +RF LK E +V+L ++ A E V +L + L + Sbjct: 272 KIKEKV-ERFSVIKTLKAIENANVVLLVIDA-NEGVSDQDLSLLSFILNSGRSL-----V 324 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 + +++ D + S+ + KN L + G + F S++ G G+ + + + + Sbjct: 325 ITVNKWDAISSEKRKQIKNSLDLRLGFMDFARTHFISALHGSGVENLFKSIKE 377 >gi|226328001|ref|ZP_03803519.1| hypothetical protein PROPEN_01892 [Proteus penneri ATCC 35198] gi|225203705|gb|EEG86059.1| hypothetical protein PROPEN_01892 [Proteus penneri ATCC 35198] Length = 119 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 4/93 (4%) Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPG 215 K+I I ++G PN GKST +TR + +AD+P T G + +EFI+ D G Sbjct: 5 KMIPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEGEEFIIIDTGG 64 Query: 216 IIKNAHQGAG--IGDRFLKHTERTHVLLHIVSA 246 I A +G + + L+ + ++L +V A Sbjct: 65 -IDGAEEGVETHMASQSLQAIQEADIVLFLVDA 96 >gi|147766666|emb|CAN63158.1| hypothetical protein VITISV_035841 [Vitis vinifera] Length = 120 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 24/36 (66%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN 197 IGI+GLPN GKST ++T+ ++PF T+ PN Sbjct: 27 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPN 62 >gi|150020690|ref|YP_001306044.1| GTP-binding protein, HSR1-related [Thermosipho melanesiensis BI429] gi|149793211|gb|ABR30659.1| GTP-binding protein, HSR1-related [Thermosipho melanesiensis BI429] Length = 357 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 4/60 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 L DI I+G+ N GKS+ ++ T A P I+ +P TT LGI+K L D PGI+ Sbjct: 150 LKEDILILGVTNVGKSSLISHFTDANPTISPFPGTT----LGIMKRRIFGINLYDTPGIL 205 >gi|31789459|gb|AAP58573.1| putative GTP-binding protein [uncultured Acidobacteria bacterium] Length = 512 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 14/143 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFILADIPGIIK 218 I I+G NAGKST L ++T ++ + F TL P L + +E +E I+ D G I+ Sbjct: 325 ISIVGYTNAGKSTLLNALTNSEVQAEQRMFATLDPTSRRLRLPRE--QEVIINDTVGFIR 382 Query: 219 NAHQGAGIGDR-FLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKIE 274 + G R L+ + +L+H+V A Q + + IL++L + Sbjct: 383 DLPPGLLSAFRATLEEIGDSTLLIHLVDASNSRWQQQVHSVEKILEQLHFSSVP-----A 437 Query: 275 IVGLSQIDTVDSDTLARKKNELA 297 I+ L+++D VD ++LA +L+ Sbjct: 438 IIVLNKMDIVDRESLAAISRQLS 460 >gi|15900846|ref|NP_345450.1| GTP-binding protein Era [Streptococcus pneumoniae TIGR4] gi|15902915|ref|NP_358465.1| GTP-binding protein Era [Streptococcus pneumoniae R6] gi|111657969|ref|ZP_01408676.1| hypothetical protein SpneT_02000858 [Streptococcus pneumoniae TIGR4] gi|116516762|ref|YP_816339.1| GTP-binding protein Era [Streptococcus pneumoniae D39] gi|148984711|ref|ZP_01817979.1| GTP-binding protein Era [Streptococcus pneumoniae SP3-BS71] gi|148992896|ref|ZP_01822515.1| GTP-binding protein Era [Streptococcus pneumoniae SP9-BS68] gi|148998595|ref|ZP_01826035.1| GTP-binding protein Era [Streptococcus pneumoniae SP11-BS70] gi|149002520|ref|ZP_01827454.1| GTP-binding protein Era [Streptococcus pneumoniae SP14-BS69] gi|149010385|ref|ZP_01831756.1| GTP-binding protein Era [Streptococcus pneumoniae SP19-BS75] gi|168483038|ref|ZP_02707990.1| GTP-binding protein Era [Streptococcus pneumoniae CDC1873-00] gi|168490212|ref|ZP_02714411.1| GTP-binding protein Era [Streptococcus pneumoniae SP195] gi|168491058|ref|ZP_02715201.1| GTP-binding protein Era [Streptococcus pneumoniae CDC0288-04] gi|168494398|ref|ZP_02718541.1| GTP-binding protein Era [Streptococcus pneumoniae CDC3059-06] gi|168575631|ref|ZP_02721567.1| GTP-binding protein Era [Streptococcus pneumoniae MLV-016] gi|182683915|ref|YP_001835662.1| GTP-binding protein Era [Streptococcus pneumoniae CGSP14] gi|225856627|ref|YP_002738138.1| GTP-binding protein Era [Streptococcus pneumoniae P1031] gi|225858762|ref|YP_002740272.1| GTP-binding protein Era [Streptococcus pneumoniae 70585] gi|225861144|ref|YP_002742653.1| GTP-binding protein Era [Streptococcus pneumoniae Taiwan19F-14] gi|237650882|ref|ZP_04525134.1| GTP-binding protein Era [Streptococcus pneumoniae CCRI 1974] gi|237821333|ref|ZP_04597178.1| GTP-binding protein Era [Streptococcus pneumoniae CCRI 1974M2] gi|298229555|ref|ZP_06963236.1| GTP-binding protein Era [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254476|ref|ZP_06978062.1| GTP-binding protein Era [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503021|ref|YP_003724961.1| GTP-binding protein Era [Streptococcus pneumoniae TCH8431/19A] gi|303254436|ref|ZP_07340542.1| GTP-binding protein Era [Streptococcus pneumoniae BS455] gi|303259881|ref|ZP_07345856.1| GTP-binding protein Era [Streptococcus pneumoniae SP-BS293] gi|303262295|ref|ZP_07348239.1| GTP-binding protein Era [Streptococcus pneumoniae SP14-BS292] gi|303264717|ref|ZP_07350635.1| GTP-binding protein Era [Streptococcus pneumoniae BS397] gi|303267324|ref|ZP_07353184.1| GTP-binding protein Era [Streptococcus pneumoniae BS457] gi|303269129|ref|ZP_07354908.1| GTP-binding protein Era [Streptococcus pneumoniae BS458] gi|307067626|ref|YP_003876592.1| GTPase [Streptococcus pneumoniae AP200] gi|61223691|sp|P0A3C3|ERA_STRPN RecName: Full=GTPase Era gi|61223692|sp|P0A3C4|ERA_STRR6 RecName: Full=GTPase Era gi|122278775|sp|Q04KV9|ERA_STRP2 RecName: Full=GTPase Era gi|226741242|sp|B2IPC3|ERA_STRPS RecName: Full=GTPase Era gi|254783665|sp|C1C6U6|ERA_STRP7 RecName: Full=GTPase Era gi|254783669|sp|C1CK50|ERA_STRZP RecName: Full=GTPase Era gi|254783670|sp|C1CRT1|ERA_STRZT RecName: Full=GTPase Era gi|5305399|gb|AAD41632.1|AF072811_1 GTPase Era [Streptococcus pneumoniae] gi|14972444|gb|AAK75090.1| GTP-binding protein Era [Streptococcus pneumoniae TIGR4] gi|15458475|gb|AAK99675.1| GTPase/GTP-binding protein [Streptococcus pneumoniae R6] gi|116077338|gb|ABJ55058.1| GTP-binding protein Era [Streptococcus pneumoniae D39] gi|147755593|gb|EDK62640.1| GTP-binding protein Era [Streptococcus pneumoniae SP11-BS70] gi|147759457|gb|EDK66449.1| GTP-binding protein Era [Streptococcus pneumoniae SP14-BS69] gi|147764866|gb|EDK71795.1| GTP-binding protein Era [Streptococcus pneumoniae SP19-BS75] gi|147923102|gb|EDK74217.1| GTP-binding protein Era [Streptococcus pneumoniae SP3-BS71] gi|147928348|gb|EDK79364.1| GTP-binding protein Era [Streptococcus pneumoniae SP9-BS68] gi|172043458|gb|EDT51504.1| GTP-binding protein Era [Streptococcus pneumoniae CDC1873-00] gi|182629249|gb|ACB90197.1| GTP-binding protein Era [Streptococcus pneumoniae CGSP14] gi|183571455|gb|EDT91983.1| GTP-binding protein Era [Streptococcus pneumoniae SP195] gi|183574573|gb|EDT95101.1| GTP-binding protein Era [Streptococcus pneumoniae CDC0288-04] gi|183575685|gb|EDT96213.1| GTP-binding protein Era [Streptococcus pneumoniae CDC3059-06] gi|183578605|gb|EDT99133.1| GTP-binding protein Era [Streptococcus pneumoniae MLV-016] gi|225720717|gb|ACO16571.1| GTP-binding protein Era [Streptococcus pneumoniae 70585] gi|225725237|gb|ACO21089.1| GTP-binding protein Era [Streptococcus pneumoniae P1031] gi|225726867|gb|ACO22718.1| GTP-binding protein Era [Streptococcus pneumoniae Taiwan19F-14] gi|298238616|gb|ADI69747.1| GTP-binding protein Era [Streptococcus pneumoniae TCH8431/19A] gi|301799945|emb|CBW32528.1| GTP-binding protein Era homolog [Streptococcus pneumoniae OXC141] gi|301801812|emb|CBW34523.1| GTP-binding protein Era homolog [Streptococcus pneumoniae INV200] gi|302598603|gb|EFL65643.1| GTP-binding protein Era [Streptococcus pneumoniae BS455] gi|302636618|gb|EFL67109.1| GTP-binding protein Era [Streptococcus pneumoniae SP14-BS292] gi|302639086|gb|EFL69546.1| GTP-binding protein Era [Streptococcus pneumoniae SP-BS293] gi|302641316|gb|EFL71684.1| GTP-binding protein Era [Streptococcus pneumoniae BS458] gi|302643134|gb|EFL73421.1| GTP-binding protein Era [Streptococcus pneumoniae BS457] gi|302645804|gb|EFL76033.1| GTP-binding protein Era [Streptococcus pneumoniae BS397] gi|306409163|gb|ADM84590.1| GTPase [Streptococcus pneumoniae AP200] gi|327389247|gb|EGE87592.1| GTP-binding protein Era [Streptococcus pneumoniae GA04375] gi|332073302|gb|EGI83781.1| GTP-binding protein Era [Streptococcus pneumoniae GA17570] gi|332076243|gb|EGI86709.1| GTP-binding protein Era [Streptococcus pneumoniae GA41301] gi|332201435|gb|EGJ15505.1| GTP-binding protein Era [Streptococcus pneumoniae GA47368] gi|332202824|gb|EGJ16893.1| GTP-binding protein Era [Streptococcus pneumoniae GA41317] Length = 299 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEARGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLSQIDDFRNQMDFKEIVP--ISALQGNNVSRLVDILSENL 169 >gi|328473385|gb|EGF44233.1| ferrous iron transport protein B [Vibrio parahaemolyticus 10329] Length = 758 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 17/169 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G K EF+L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGQFKHAGDEFLLTDLPGIYSLDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH ++++++ A LE ++ Q EL + + +V Sbjct: 68 SNSIDESIASRAVLTHPADLIINVIDATSLERSLYMTLQL---------RELGRPMVVV- 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L+++D + + EL G S+ + + E LH I Sbjct: 118 LNKMDALKRERQMINIAELEKTLGCPVISLSATNKAQVAEFKEKLHKAI 166 >gi|312868217|ref|ZP_07728417.1| ribosome biogenesis GTPase Era [Streptococcus parasanguinis F0405] gi|322389989|ref|ZP_08063528.1| GTP-binding protein Era [Streptococcus parasanguinis ATCC 903] gi|311095962|gb|EFQ54206.1| ribosome biogenesis GTPase Era [Streptococcus parasanguinis F0405] gi|321143302|gb|EFX38741.1| GTP-binding protein Era [Streptococcus parasanguinis ATCC 903] Length = 299 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEPRGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ +Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLAQIDDFRSQMDFKEIVP--ISALQGNNVSRLIDILSENL 169 >gi|226366173|ref|YP_002783956.1| GTP-binding protein HflX [Rhodococcus opacus B4] gi|226244663|dbj|BAH55011.1| putative GTP-binding protein HflX [Rhodococcus opacus B4] Length = 484 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 25/185 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGIIKN 219 I I+G NAGKS+ L ++T + + + F TL P + +G +E++L D G ++ Sbjct: 262 IAIVGYTNAGKSSLLNALTGSGVLVQNALFATLDPTTRRAALDDG-REYVLTDTVGFVR- 319 Query: 220 AHQGAGIGDRF---LKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 H + + F L+ +LLH+V + + ++A ++ I + + ++ Sbjct: 320 -HLPTQLIEAFRSTLEEVTDADLLLHVVDGSDPLPTDQIKAVHEVITEVIRENDAA--AP 376 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQILECLHDKIFSIR 330 E++ +++ID D TL + + G +P S+ TG G+ ++ L D + +R Sbjct: 377 PELIVVNKIDAADPVTLTQLR-------GLLPGASFVSARTGEGVAELRAHLSDVL--VR 427 Query: 331 GENEF 335 E E Sbjct: 428 PEIEV 432 >gi|254487127|ref|ZP_05100332.1| GTP-binding protein Era [Roseobacter sp. GAI101] gi|214043996|gb|EEB84634.1| GTP-binding protein Era [Roseobacter sp. GAI101] Length = 302 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 + +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGASQLVFVDTPGLFQ 65 >gi|110743594|dbj|BAE99634.1| hypothetical protein [Arabidopsis thaliana] Length = 620 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 17/140 (12%) Query: 147 GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK 206 G++K + L+ + I ++G NAGKST ++++T+A + F TL P L Sbjct: 333 GRKKRVGLEGESSGTIAVVGYTNAGKSTLISALTKAALYCNERLFATLDPTLKSAHLPSG 392 Query: 207 EFIL--------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC- 257 F+L +D+P + A Q L+ +LLH+V + N++ Sbjct: 393 NFVLLSDTVGFISDLPIQLVKAFQST------LEEVVEADLLLHVVDSTAPNIEEHRSTV 446 Query: 258 --ILDELSAYNSELRKKIEI 275 +L+++ +L+ IE+ Sbjct: 447 LHVLNQIGVPEEKLQNMIEV 466 >gi|83593805|ref|YP_427557.1| ferrous iron transport protein B [Rhodospirillum rubrum ATCC 11170] gi|83576719|gb|ABC23270.1| Ferrous iron transport protein B [Rhodospirillum rubrum ATCC 11170] Length = 786 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 20/153 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G PN GK+T ++T + + ++P T+ +G + G + + D+PG+ Sbjct: 6 VCVVGNPNCGKTTLFNALTGGRQSVGNWPGVTVEKKVGAYRHGGEAVTIVDLPGVYSLTP 65 Query: 222 QGAGIGDRFLKHTERTHVL-------LHIVSA--LEENVQAAYQCILDELSAYNSELRKK 272 + D + R ++L L+IV A LE N+ Q + E+ + Sbjct: 66 TSSSSED---ERVARDYILSGEAGLVLNIVDASNLERNLYLTAQLL--EMRVPMVVIVNM 120 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 ++I +D +D D L++ + C VP Sbjct: 121 MDIAASRHLD-IDIDALSKSLD-----CKVVPM 147 >gi|225854473|ref|YP_002735985.1| GTP-binding protein Era [Streptococcus pneumoniae JJA] gi|254783668|sp|C1CDW4|ERA_STRZJ RecName: Full=GTPase Era gi|225722974|gb|ACO18827.1| GTP-binding protein Era [Streptococcus pneumoniae JJA] Length = 299 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEARGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLSQIDDFRNQMDFKEIVP--ISALQGNNVSRLVDILSENL 169 >gi|145495268|ref|XP_001433627.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124400746|emb|CAK66230.1| unnamed protein product [Paramecium tetraurelia] Length = 115 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 19/35 (54%), Positives = 23/35 (65%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL 194 + IG+IG P+ GKST L +T KIA Y FTTL Sbjct: 64 SRIGMIGFPSVGKSTLLTKLTGVFSKIAAYEFTTL 98 >gi|320537379|ref|ZP_08037334.1| GTP-binding protein Era [Treponema phagedenis F0421] gi|320145844|gb|EFW37505.1| GTP-binding protein Era [Treponema phagedenis F0421] Length = 295 Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 23/172 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG P+AGKSTFL + K I +D P TT GIV + + D PG Sbjct: 6 VTIIGRPSAGKSTFLNTACGEKVSIVSDIPQTTRNAVRGIVNTNKGQIVFIDTPG----Y 61 Query: 221 HQGAGIGDRFL------KHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 H ++ L K E +L + S+ E V+ C A S L+ KI Sbjct: 62 HASEKKFNKQLQEITCAKLAEADAILYLVDSSKEFGVEEESIC------ALLSTLQNKI- 114 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPF----EFSSITGHGIPQILECL 322 ++GL+++D ++ N + + ++P + S+ I ++L CL Sbjct: 115 VIGLNKVDLPEAKPQLLTVN-ITNRLSEIPLNRFIQISAEKDQKINELLSCL 165 >gi|304439411|ref|ZP_07399322.1| FeoB family ferrous iron (Fe2+) uptake protein [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372107|gb|EFM25702.1| FeoB family ferrous iron (Fe2+) uptake protein [Peptoniphilus duerdenii ATCC BAA-1640] Length = 712 Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 75/163 (46%), Gaps = 14/163 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN+GKST ++T + + ++P T+ G+ K+ K+ + D+PGI + Sbjct: 5 IALAGNPNSGKSTLFNALTGSNQYVGNWPGVTVEKKTGLYKKE-KDVAITDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ V++ +V + +E N+ A Q SEL + ++ L Sbjct: 64 YTLEEVVSRDYLINEKVDVIIDVVDGTNIERNLYLATQL---------SELGIPL-VIAL 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 + +D V + ++ + G E S++ G I ++E Sbjct: 114 NMMDVVRKNKDYIDVAQIEKRLGCKVVEISALKGENIDHLVEV 156 >gi|296242943|ref|YP_003650430.1| small GTP-binding protein [Thermosphaera aggregans DSM 11486] gi|296095527|gb|ADG91478.1| small GTP-binding protein [Thermosphaera aggregans DSM 11486] Length = 689 Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 33/55 (60%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + +IG PN GKS+ ++T IA++P TT+ G+VK +E L D+PGI Sbjct: 5 VALIGQPNVGKSSLFKALTGGDVMIANWPGTTVERVEGVVKYKGREIRLIDLPGI 59 >gi|29840032|ref|NP_829138.1| GTP-binding protein HflX, putative [Chlamydophila caviae GPIC] gi|29834379|gb|AAP05016.1| GTP-binding protein HflX, putative [Chlamydophila caviae GPIC] Length = 458 Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 16/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 I +IG N+GKST L +T A+ D F TL P I+ G + + + I Sbjct: 227 IPSFALIGYTNSGKSTLLNFLTSAETYAEDKLFATLDPKTRRCILPCGQRVLVTDTVGFI 286 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 K H L+ VLLH+V A E+++ + IL EL + ++ Sbjct: 287 RKLPHTLVAAFKSTLEAALHEDVLLHVVDASHPLAFEHIETT-KAILQELGIEHPKI--- 342 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + L++ID + + K L+ + VP S+ TG GI +LE + + + Sbjct: 343 --VTVLNKIDALPDSKASVKLRLLSPRA--VP--VSAKTGEGIQNLLEAMTEMV 390 >gi|315123111|ref|YP_004065117.1| GTP-binding protein EngA [Pseudoalteromonas sp. SM9913] gi|315016872|gb|ADT70209.1| GTP-binding protein EngA [Pseudoalteromonas sp. SM9913] Length = 489 Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 13/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST +TR + +AD+P T G EFI+ D G I + Sbjct: 5 IALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYDGFEFIVVDTGG-IDGS 63 Query: 221 HQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + D+ L E ++L +V A + A Q I + L + KK +V Sbjct: 64 EEGIETEMADQSLLAIEEADIVLFLVDA-RVGMTVADQAIANHL----RKQEKKCFVVA- 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L+ G+V ++ G GI +LE Sbjct: 118 NKTDGIDADSNCAEFYQLS--LGEV-HHIAAAHGRGITLLLE 156 >gi|261207325|ref|ZP_05922012.1| GTP-binding protein [Enterococcus faecium TC 6] gi|289566524|ref|ZP_06446947.1| GTP-binding protein HflX [Enterococcus faecium D344SRF] gi|294616545|ref|ZP_06696323.1| GTP-binding proten HflX [Enterococcus faecium E1636] gi|260078385|gb|EEW66089.1| GTP-binding protein [Enterococcus faecium TC 6] gi|289161678|gb|EFD09555.1| GTP-binding protein HflX [Enterococcus faecium D344SRF] gi|291590592|gb|EFF22323.1| GTP-binding proten HflX [Enterococcus faecium E1636] Length = 409 Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 8/113 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGI 216 I IG+IG NAGKST L +T+A D F TL P + EG+ E + D G Sbjct: 193 IFQIGLIGYTNAGKSTILNLLTQADTYSKDQLFATLDPLTKRWRFAEGF-EITVTDTVGF 251 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN 266 I++ + D F L+ ++ +LLH+V A + Q +L + N Sbjct: 252 IQDL--PTQLIDAFHSTLEESQNMDLLLHVVDASSPDRILQEQTVLKLMDELN 302 >gi|149019560|ref|ZP_01834879.1| GTP-binding protein Era [Streptococcus pneumoniae SP23-BS72] gi|147930935|gb|EDK81915.1| GTP-binding protein Era [Streptococcus pneumoniae SP23-BS72] Length = 299 Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEARGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLSQIDDFRNQMDFKEIVP--ISALQGNNVSRLVDILSENL 169 >gi|149006354|ref|ZP_01830066.1| GTP-binding protein Era [Streptococcus pneumoniae SP18-BS74] gi|169834294|ref|YP_001694414.1| GTP-binding protein Era [Streptococcus pneumoniae Hungary19A-6] gi|221231732|ref|YP_002510884.1| GTP-binding protein Era homolog [Streptococcus pneumoniae ATCC 700669] gi|307127480|ref|YP_003879511.1| GTP-binding protein Era [Streptococcus pneumoniae 670-6B] gi|307704699|ref|ZP_07641598.1| GTP-binding protein Era [Streptococcus mitis SK597] gi|307706467|ref|ZP_07643276.1| GTP-binding protein Era [Streptococcus mitis SK321] gi|322376464|ref|ZP_08050957.1| GTP-binding protein Era [Streptococcus sp. M334] gi|226741241|sp|B1IBC9|ERA_STRPI RecName: Full=GTPase Era gi|254783666|sp|B8ZP66|ERA_STRPJ RecName: Full=GTPase Era gi|147762131|gb|EDK69093.1| GTP-binding protein Era [Streptococcus pneumoniae SP18-BS74] gi|168996796|gb|ACA37408.1| GTP-binding protein Era [Streptococcus pneumoniae Hungary19A-6] gi|220674192|emb|CAR68720.1| GTP-binding protein Era homolog [Streptococcus pneumoniae ATCC 700669] gi|306484542|gb|ADM91411.1| GTP-binding protein Era [Streptococcus pneumoniae 670-6B] gi|307618177|gb|EFN97335.1| GTP-binding protein Era [Streptococcus mitis SK321] gi|307621746|gb|EFO00784.1| GTP-binding protein Era [Streptococcus mitis SK597] gi|321282271|gb|EFX59278.1| GTP-binding protein Era [Streptococcus sp. M334] gi|332075585|gb|EGI86053.1| GTP-binding protein Era [Streptococcus pneumoniae GA17545] Length = 299 Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEARGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLSQIDDFRNQMDFKEIVP--ISALQGNNVSRLVDILSENL 169 >gi|23099406|ref|NP_692872.1| GTP-binding protein [Oceanobacillus iheyensis HTE831] gi|81746143|sp|Q8EPY0|ERA_OCEIH RecName: Full=GTPase Era gi|22777635|dbj|BAC13907.1| GTP-binding protein (Era/TrmE family) [Oceanobacillus iheyensis HTE831] Length = 300 Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 14/133 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G+ + I D PGI K Sbjct: 10 LSIIGRPNVGKSTFMNKVIGQKIAIMSDKAQTTRNKIQGVFTTNDAQMIFIDTPGIHKPK 69 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD ++ E T +L +++A +E Q I+D L NS + + Sbjct: 70 HR---LGDFMVQIAEDTLNEVDSILFMINA-DEGYGRGDQYIIDLLQKVNSPV-----FL 120 Query: 277 GLSQIDTVDSDTL 289 +++ID + D L Sbjct: 121 IINKIDLIHPDQL 133 >gi|226946062|ref|YP_002801135.1| GTP-binding protein EngA [Azotobacter vinelandii DJ] gi|259645867|sp|C1DE52|DER_AZOVD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|226720989|gb|ACO80160.1| Small GTP-binding protein EngA [Azotobacter vinelandii DJ] Length = 491 Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 11/166 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +T+ + I A+Y T G K + +I+ D GI Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTKTRDAIVAEYAGLTRDRQYGEAKWQGRTYIVIDTGGI 60 Query: 217 IKNAHQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + A + ++ L+ E +L +V + + AA Q I + L N K Sbjct: 61 SGDEEGIDAKMAEQSLQAIEEADAVLFMVDS-RAGMTAADQLIAEHLRKRN-----KRSF 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 + +++DTVD D +AR + +P ++ G GI +LE Sbjct: 115 LVANKVDTVDPD-IARAEFSPLGLGDALP--IAAAHGRGINAMLEA 157 >gi|330817161|ref|YP_004360866.1| Small GTP-binding protein [Burkholderia gladioli BSR3] gi|327369554|gb|AEA60910.1| Small GTP-binding protein [Burkholderia gladioli BSR3] Length = 400 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ AD F TL V G + + +++D G I+ Sbjct: 198 MSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYIGDEVGQIVVSDTVGFIRE 257 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 258 LPHQLVAAFRATLEETIHADLLLHVVDA 285 >gi|294618386|ref|ZP_06697964.1| GTP-binding proten HflX [Enterococcus faecium E1679] gi|291595363|gb|EFF26678.1| GTP-binding proten HflX [Enterococcus faecium E1679] Length = 409 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 8/113 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGI 216 I IG+IG NAGKST L +T+A D F TL P + EG+ E + D G Sbjct: 193 IFQIGLIGYTNAGKSTILNLLTQADTYSKDQLFATLDPLTKRWRFAEGF-EITVTDTVGF 251 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN 266 I++ + D F L+ ++ +LLH+V A + Q +L + N Sbjct: 252 IQDL--PTQLIDAFHSTLEESQNMDLLLHVVDASSPDRILQEQTVLKLMDELN 302 >gi|317012333|gb|ADU82941.1| GTP-binding protein Era [Helicobacter pylori Lithuania75] Length = 301 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 25/173 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYK-EFILADIPG 215 + +IG PNAGKST L ++ A + + + + KEGY+ + I D PG Sbjct: 8 VALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPG 67 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS--ELRKKI 273 + HQ ++ L + L + A ++ + D+L Y L +K Sbjct: 68 L---HHQ-----EKLLNQCMLSQALKAMGDA---ELRVFLASVHDDLKGYEEFLSLCQKP 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECL 322 I+ LS+IDT + +K E Q VP S+ + +LEC+ Sbjct: 117 HILALSKIDTATHKQVLQKLQEYQQYASQFLDLVP--LSAKKSQNLNALLECI 167 >gi|307709149|ref|ZP_07645608.1| GTP-binding protein Era [Streptococcus mitis SK564] gi|307620095|gb|EFN99212.1| GTP-binding protein Era [Streptococcus mitis SK564] Length = 299 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEARGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLSQIDDFRNQMDFKEIVP--ISALQGNNVSRLVDILSENL 169 >gi|291535016|emb|CBL08128.1| GTP-binding protein HflX [Roseburia intestinalis M50/1] Length = 414 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 4/124 (3%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN-A 220 I+G NAGKST L +T A D F TL P +++ G +E +L D G I+ Sbjct: 205 AIVGYTNAGKSTLLNHLTGAGVLEEDKLFATLDPTTRVLELPGRQEILLTDTVGFIRKLP 264 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H L+ + +LH+V A + D L Y ++R+K I ++ Sbjct: 265 HHLIEAFKSTLEEAKYADYILHVVDASNPQRDKQMHIVYDTL--YQLDIREKTIITLFNK 322 Query: 281 IDTV 284 D V Sbjct: 323 QDQV 326 >gi|15611533|ref|NP_223184.1| GTP-binding protein Era [Helicobacter pylori J99] gi|10719990|sp|Q9ZLW0|ERA_HELPJ RecName: Full=GTPase Era gi|4154994|gb|AAD06035.1| GTP-binding protein [Helicobacter pylori J99] Length = 301 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 25/173 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYK-EFILADIPG 215 + +IG PNAGKST L ++ A + + + + KEGY+ + I D PG Sbjct: 8 VALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPG 67 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS--ELRKKI 273 + HQ ++ L + L + A ++ + D+L Y L +K Sbjct: 68 L---HHQ-----EKLLNQCMLSQALKAMGDA---ELRVFLASVHDDLKGYEEFLSLCQKP 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECL 322 I+ LS+IDT + +K E Q VP S+ + +LEC+ Sbjct: 117 HILALSKIDTATHKQVLQKLQEYQKYSSQFLALVP--LSAKKSQNLNALLECI 167 >gi|262304205|gb|ACY44695.1| GTP-binding protein [Amblyomma sp. 'Amb2'] Length = 280 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAY 265 + DI G++K A G G+G+ FL H L H+ E+ +V+ + D + Sbjct: 35 VVDIAGLVKGASDGQGLGNAFLSHIRACDALFHLCRTFEDEDVTHVEGDVNPVRD-IGII 93 Query: 266 NSELRKKIEIVGLSQIDTVDSDTL 289 N ELRKK E + ID ++ L Sbjct: 94 NEELRKKDEEYLFAIIDKMERTVL 117 >gi|242373872|ref|ZP_04819446.1| GTP-binding protein Era [Staphylococcus epidermidis M23864:W1] gi|242348426|gb|EES40028.1| GTP-binding protein Era [Staphylococcus epidermidis M23864:W1] Length = 300 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 6/132 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G++ + I D PGI K Sbjct: 10 VSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK 69 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H+ R K+T + + + E++ + I++ L + + + L++ Sbjct: 70 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVKTPI-----FLVLNK 124 Query: 281 IDTVDSDTLARK 292 ID V D L K Sbjct: 125 IDLVHPDALMPK 136 >gi|242398493|ref|YP_002993917.1| FeoB ferrous iron transport protein B - like protein [Thermococcus sibiricus MM 739] gi|242264886|gb|ACS89568.1| FeoB ferrous iron transport protein B - like protein [Thermococcus sibiricus MM 739] Length = 681 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 32/54 (59%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 I + G PN GK+T ++T + + ++P T+ GI+K KEF++ D+PG Sbjct: 21 IALAGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGILKYHNKEFLVVDLPG 74 >gi|168485921|ref|ZP_02710429.1| GTP-binding protein Era [Streptococcus pneumoniae CDC1087-00] gi|183571044|gb|EDT91572.1| GTP-binding protein Era [Streptococcus pneumoniae CDC1087-00] Length = 299 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEARGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLSQIDDFRNQMDFKEIVP--ISALQGNNVSRLVDILSENL 169 >gi|149031326|gb|EDL86324.1| rCG38919 [Rattus norvegicus] Length = 518 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGY-KEFI-LADIPGIIK 218 +G++GLPN GKS+ + S+ R++ + P T + ++E Y +FI L D PGI+ Sbjct: 190 VGVVGLPNVGKSSLINSLKRSRACSVGAVPGVTKF-----MQEVYLDKFIRLLDAPGIVP 244 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + G R H ++ L V+ +E +Q +C L+E+S Y Sbjct: 245 GPNSEVGTILRNCIHVQK---LADPVTPVETILQ---RCNLEEISNY 285 >gi|54114479|gb|AAV29873.1| NT02FT1337 [synthetic construct] Length = 297 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + IIG PN GKST L ++ + K I P TT + GI G +FI D PGI Sbjct: 7 LSIIGRPNVGKSTLLNNILKYKVSITSRKPQTTRHQITGIKTLGDTQFIYVDTPGI 62 >gi|86140695|ref|ZP_01059254.1| putative GTP-binding protein [Leeuwenhoekiella blandensis MED217] gi|85832637|gb|EAQ51086.1| putative GTP-binding protein [Leeuwenhoekiella blandensis MED217] Length = 309 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 2/85 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + ++ + I TT + LGIV + I +D PGIIK A Sbjct: 23 VNIIGNPNVGKSTLMNAIVGERLSIITSKAQTTRHRILGIVNGDDFQAIFSDTPGIIKPA 82 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIV 244 ++ F+K E VL+++V Sbjct: 83 YELQASMMDFVKSAFEDADVLIYMV 107 >gi|289167813|ref|YP_003446082.1| GTPase/GTP-binding protein Era [Streptococcus mitis B6] gi|288907380|emb|CBJ22217.1| GTPase/GTP-binding protein Era [Streptococcus mitis B6] Length = 299 Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEARGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLSQIDDFRNQMDFKEIVP--ISALQGNNVSRLVDILSENL 169 >gi|256845852|ref|ZP_05551310.1| GTP-binding protein Era [Fusobacterium sp. 3_1_36A2] gi|256719411|gb|EEU32966.1| GTP-binding protein Era [Fusobacterium sp. 3_1_36A2] Length = 298 Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 8/165 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST + + K I T N+ GI+ ++I D PGI K Sbjct: 6 IAVVGRPNVGKSTLINKLVSEKVAIVSDKAGTTRDNIKGILNFKDNQYIFIDTPGIHKPQ 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H G + + +K + ++L ++ A + + ++D + N +KK +I+ ++ Sbjct: 66 HLLGEYMTNIAVKILKDVDIILFLIDA-SKPIGTGDMSVMDRI---NENAKKKPKILLVN 121 Query: 280 QIDTVDSDTLARKKNELATQCGQV-PFEFSS-ITGHGIPQILECL 322 ++D + + K E+ + G+ F+S + GI Q+LE L Sbjct: 122 KVDLISDEQKEEKLKEIEEKLGEFNKIIFASGMYSFGISQLLEAL 166 >gi|74007450|ref|XP_538054.2| PREDICTED: similar to guanine nucleotide binding protein-like 3 (nucleolar)-like [Canis familiaris] Length = 649 Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGY-KEFI-LADIPGIIK 218 +G++GLPN GKS+ + S+ R++ + P T + ++E Y +FI L D PGI+ Sbjct: 322 VGVVGLPNVGKSSLINSLKRSRACSVGAVPGVTKF-----MQEVYLDKFIRLLDAPGIVP 376 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + G L++ + L V+ +E +Q +C L+E+S Y Sbjct: 377 GPNSEVGT---ILRNCVQVQNLADPVTPVETILQ---RCNLEEISNY 417 >gi|330811509|ref|YP_004355971.1| GTP-binding protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379617|gb|AEA70967.1| Conserved hypothetical protein; putative GTP-binding protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 300 Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ K Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGAVQAIYVDTPGMHKGG 71 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 72 EKAL---NRYMNKT 82 >gi|257899220|ref|ZP_05678873.1| GTP-binding protein [Enterococcus faecium Com15] gi|293570366|ref|ZP_06681423.1| GTP-binding proten HflX [Enterococcus faecium E980] gi|257837132|gb|EEV62206.1| GTP-binding protein [Enterococcus faecium Com15] gi|291609544|gb|EFF38809.1| GTP-binding proten HflX [Enterococcus faecium E980] Length = 409 Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 8/113 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGI 216 I IG+IG NAGKST L +T+A D F TL P + EG+ E + D G Sbjct: 193 IFQIGLIGYTNAGKSTILNLLTQADTYSKDQLFATLDPLTKRWRFAEGF-EITVTDTVGF 251 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN 266 I++ + D F L+ ++ +LLH+V A + Q +L + N Sbjct: 252 IQDL--PTQLIDAFHSTLEESQNMDLLLHVVDASSPDRILQEQTVLKLMDELN 302 >gi|227503450|ref|ZP_03933499.1| HflX family GTP-binding protein [Corynebacterium accolens ATCC 49725] gi|227075953|gb|EEI13916.1| HflX family GTP-binding protein [Corynebacterium accolens ATCC 49725] Length = 502 Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 17/169 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 IA I I G NAGKS+ + ++T A + D F TL P + +G ++ + D G Sbjct: 273 IAQIAIAGYTNAGKSSLINAMTNAGVLVEDALFATLDPTTRRASLADG-RQVVFTDTVGF 331 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSEL 269 ++ H + + F L+ ++LH+V + + ++A + I D +S + Sbjct: 332 VR--HLPTQLVEAFKSTLEEVLAADIMLHVVDGSDPFPLKQIEAVNEVIYDIVSETGEQ- 388 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 EI+ +++ID D LA ++ L + V + S+ TG GI ++ Sbjct: 389 -APPEIIVINKIDQADPLVLAELRHVLDHE--DVVY-VSARTGEGIDEL 433 >gi|159042757|ref|YP_001531551.1| GTP-binding protein Era [Dinoroseobacter shibae DFL 12] gi|189037268|sp|A8LLE0|ERA_DINSH RecName: Full=GTPase Era gi|157910517|gb|ABV91950.1| GTP-binding protein Era [Dinoroseobacter shibae DFL 12] Length = 308 Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 6/164 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST ++ AK I + T + G+ EG + + D PG+ + Sbjct: 13 VALIGEPNAGKSTLTNAMVGAKVSIVTHKVQTTRARIRGVALEGAAQIVFVDTPGLFRPR 72 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + + +++ +V A + + IL+ L+ K+I + ++ Sbjct: 73 RRLDRAMVAAAWGGAADADIVVLMVEA-HRGMTDGVRAILETLNERRDP--KQIVALAIN 129 Query: 280 QIDTVDSDTLARKKNEL-ATQCGQVPFEFSSITGHGIPQILECL 322 +ID V S+ L + +L A F S+ G+G+ + L Sbjct: 130 KIDRVKSEVLLKLTQDLNAAYPFAETFMISAEKGYGVADLRAWL 173 >gi|239627276|ref|ZP_04670307.1| ferrous iron transport protein B [Clostridiales bacterium 1_7_47_FAA] gi|239517422|gb|EEQ57288.1| ferrous iron transport protein B [Clostridiales bacterium 1_7_47FAA] Length = 724 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 14/157 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T +T + + ++P T+ G +K G K+ I+ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNGLTGSNQFVGNWPGVTVEKKEGKLK-GSKDVIIMDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R TER +L+IV + LE N+ + Q + EL + ++ + Sbjct: 64 YTLEEVVARNYLITERPDAILNIVDGTNLERNLYLSTQLM---------ELGIPV-LMAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 + +D V + + L+ + G E S++ G GI Sbjct: 114 NMMDIVKKNGDQINIDALSRELGCPVVEISALKGTGI 150 >gi|154343491|ref|XP_001567691.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065023|emb|CAM43135.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 968 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 5/41 (12%) Query: 164 IIGLPNAGKSTFLASVTRA-----KPKIADYPFTTLYPNLG 199 +IG P+AGKSTF +VT ++A +PFTT+ PN+G Sbjct: 475 LIGKPSAGKSTFFNAVTNPADESDAARVASFPFTTIEPNVG 515 >gi|71908333|ref|YP_285920.1| GTP-binding protein, HSR1-related [Dechloromonas aromatica RCB] gi|71847954|gb|AAZ47450.1| GTP-binding protein HflX [Dechloromonas aromatica RCB] Length = 468 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 5/135 (3%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 +A + ++G NAGKST + ++T ++ +A+ F TL + + E +++D G I Sbjct: 242 LAGVALVGYTNAGKSTLMRALTGSEVLVANKLFATLDTTVRTLHPESVPRVLVSDTVGFI 301 Query: 218 KNAHQG-AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 KN G L+ +LLH++ A + + Q D L ++ +I + Sbjct: 302 KNLPHGLVASFKSTLEEALDASLLLHVIDASDPGFERQLQVTDDVLHEIGADAVPRIRV- 360 Query: 277 GLSQIDTV-DSDTLA 290 ++ID V DS+ A Sbjct: 361 -FNKIDHVGDSEAQA 374 >gi|326492313|dbj|BAK01940.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 592 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 22/117 (18%) Query: 146 LGQEKIIWL--------KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN 197 LG E +I L +LKL +GI+GLPN GKS+ + S+ R++ + Sbjct: 234 LGAENLIKLLKNYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSR-------VVNVGST 286 Query: 198 LGIVKEGY-----KEFILADIPGII--KNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 G+ + K+ L D PG++ ++A G + R K E+ ++ V + Sbjct: 287 PGVTRSMQEVQLDKKVKLLDCPGVVMLRSASSGVSVALRNCKRVEKMEDVITPVKEI 343 >gi|307637195|gb|ADN79645.1| GTP-binding protein [Helicobacter pylori 908] gi|325995784|gb|ADZ51189.1| GTP-binding protein [Helicobacter pylori 2018] gi|325997380|gb|ADZ49588.1| GTP-binding protein [Helicobacter pylori 2017] Length = 301 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 25/173 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYK-EFILADIPG 215 + +IG PNAGKST L ++ A + + + + KEGY+ + I D PG Sbjct: 8 VALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPG 67 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS--ELRKKI 273 + HQ ++ L + L + A ++ + D+L Y L +K Sbjct: 68 L---HHQ-----EKLLNQCMLSQALKAMGDA---ELRVFLASVHDDLKGYEEFLSLCQKP 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECL 322 I+ LS+IDT + +K E Q VP S+ + +LEC+ Sbjct: 117 HILALSKIDTATHKQVLQKLQEYQKYASQFLDLVP--LSAKKSQNLNALLECI 167 >gi|260425485|ref|ZP_05779465.1| GTP-binding protein Era [Citreicella sp. SE45] gi|260423425|gb|EEX16675.1| GTP-binding protein Era [Citreicella sp. SE45] Length = 301 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 I +IG PNAGKST + AK I + T + G+ EG + I D PG+ K Sbjct: 8 IALIGEPNAGKSTLTNRMVGAKVSIVTHKVQTTRARIRGVAMEGDSQLIFVDTPGLFK 65 >gi|160935386|ref|ZP_02082768.1| hypothetical protein CLOBOL_00281 [Clostridium bolteae ATCC BAA-613] gi|158441744|gb|EDP19444.1| hypothetical protein CLOBOL_00281 [Clostridium bolteae ATCC BAA-613] Length = 726 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 14/165 (8%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 +K+ I + G PN GK+T +T + + ++P T+ G +K G K+ I+ D+PG Sbjct: 1 MKMSIKIALAGNPNCGKTTLFNGLTGSNQFVGNWPGVTVEKKEGKLK-GNKDVIIMDLPG 59 Query: 216 IIK-NAHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKK 272 I + + + R T+R +L+IV + LE N+ Q L EL Sbjct: 60 IYSLSPYTLEEVVARNYLITQRPDAILNIVDGTNLERNLYLTTQ--LMELGIPVLMAVNM 117 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQ 317 +++V S D +D L+R + G E S++ G GI + Sbjct: 118 MDVVKKSG-DRIDIQALSR-------ELGCPVVEISALKGTGIME 154 >gi|148270008|ref|YP_001244468.1| ferrous iron transport protein B [Thermotoga petrophila RKU-1] gi|147735552|gb|ABQ46892.1| ferrous iron transport protein B [Thermotoga petrophila RKU-1] Length = 667 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 23/181 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I + + G PN GK++ ++T K +A++P T+ G+ L D+PG Sbjct: 14 IVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKGYTINLIDLPGTYS 73 Query: 219 NAHQGAGIGDRFLKHTERTHVL-----LHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 + + R ++L L I+ A N + + +L+ L E+ KK+ Sbjct: 74 LGYSSID------EKIARDYLLKGDADLVILVADSVNPEQSLYLLLEIL-----EMEKKV 122 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILECLHDKIFSIRGE 332 I+ ++ ID + + EL G +P F SS+TG G LE L +KI + Sbjct: 123 -ILAMTAIDEAKKTGMKIDRYELQKHLG-IPVVFTSSVTGEG----LEELKEKIVEYAQK 176 Query: 333 N 333 N Sbjct: 177 N 177 >gi|294784965|ref|ZP_06750253.1| GTP-binding protein Era [Fusobacterium sp. 3_1_27] gi|294486679|gb|EFG34041.1| GTP-binding protein Era [Fusobacterium sp. 3_1_27] Length = 298 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 8/165 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST + + K I T N+ GI+ ++I D PGI K Sbjct: 6 IAVVGRPNVGKSTLINKLVSGKVAIVSDKAGTTRDNIKGILNFKDNQYIFIDTPGIHKPQ 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H G + + +K + ++L ++ A + + ++D + N +KK +I+ ++ Sbjct: 66 HLLGEYMTNIAVKILKDVDIILFLIDA-SKPIGTGDMFVMDRI---NENTKKKPKILLVN 121 Query: 280 QIDTVDSDTLARKKNELATQCGQV-PFEFSS-ITGHGIPQILECL 322 ++D + + K E+ + G+ F+S + GI Q+LE L Sbjct: 122 KVDLISDEQKEEKLKEIKEKLGEFNKIIFASGMYSFGISQLLEAL 166 >gi|227550374|ref|ZP_03980423.1| HflX subfamily GTP-binding protein [Enterococcus faecium TX1330] gi|257888407|ref|ZP_05668060.1| GTP-binding protein [Enterococcus faecium 1,141,733] gi|257897219|ref|ZP_05676872.1| GTP-binding protein [Enterococcus faecium Com12] gi|293377991|ref|ZP_06624169.1| GTP-binding protein HflX [Enterococcus faecium PC4.1] gi|227180513|gb|EEI61485.1| HflX subfamily GTP-binding protein [Enterococcus faecium TX1330] gi|257824461|gb|EEV51393.1| GTP-binding protein [Enterococcus faecium 1,141,733] gi|257833784|gb|EEV60205.1| GTP-binding protein [Enterococcus faecium Com12] gi|292643356|gb|EFF61488.1| GTP-binding protein HflX [Enterococcus faecium PC4.1] Length = 409 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 8/113 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGI 216 I IG+IG NAGKST L +T+A D F TL P + EG+ E + D G Sbjct: 193 IFQIGLIGYTNAGKSTILNLLTQADTYSKDQLFATLDPLTKRWRFAEGF-EITVTDTVGF 251 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN 266 I++ + D F L+ ++ +LLH+V A + Q +L + N Sbjct: 252 IQDL--PTQLIDAFHSTLEESQNMDLLLHVVDASSPDRILQEQTVLKLMDELN 302 >gi|109130879|ref|XP_001090251.1| PREDICTED: guanine nucleotide binding protein-like 3 (nucleolar)-like isoform 2 [Macaca mulatta] Length = 581 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGY-KEFI-LADIPGIIK 218 +G++GLPN GKS+ + S+ R++ + P T + ++E Y +FI L D PGI+ Sbjct: 254 VGVVGLPNVGKSSLINSLKRSRACSVGAVPGITKF-----MQEVYLDKFIRLLDAPGIVP 308 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + G R H ++ L V+ +E +Q +C L+E+S Y Sbjct: 309 GPNSEVGTILRNCVHVQK---LADPVTPVETILQ---RCNLEEISNY 349 >gi|15601970|ref|NP_245042.1| GTP-binding protein EngA [Pasteurella multocida subsp. multocida str. Pm70] gi|13431507|sp|P57812|DER_PASMU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|12720316|gb|AAK02189.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 510 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANIAGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A +A ++ Y + + KI +V Sbjct: 65 EEGVEEKMAEQSLLAIEEADVVLFLVDA-----RAGLTSADIGIANYLRQRQNKITVVVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G+V + ++ G G+ ++E Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGEVE-QIAASQGRGVSALME 158 >gi|69249005|ref|ZP_00604848.1| GTP-binding protein, HSR1-related [Enterococcus faecium DO] gi|257879593|ref|ZP_05659246.1| GTP-binding protein [Enterococcus faecium 1,230,933] gi|257882612|ref|ZP_05662265.1| GTP-binding protein [Enterococcus faecium 1,231,502] gi|257885035|ref|ZP_05664688.1| GTP-binding protein [Enterococcus faecium 1,231,501] gi|257890261|ref|ZP_05669914.1| GTP-binding protein [Enterococcus faecium 1,231,410] gi|257893445|ref|ZP_05673098.1| GTP-binding protein [Enterococcus faecium 1,231,408] gi|258616796|ref|ZP_05714566.1| GTP-binding protein [Enterococcus faecium DO] gi|260559742|ref|ZP_05831922.1| GTP-binding protein [Enterococcus faecium C68] gi|293557247|ref|ZP_06675795.1| GTP-binding protein HflX [Enterococcus faecium E1039] gi|293559761|ref|ZP_06676282.1| GTP-binding proten HflX [Enterococcus faecium E1162] gi|293567603|ref|ZP_06678947.1| GTP-binding proten HflX [Enterococcus faecium E1071] gi|294623235|ref|ZP_06702106.1| GTP-binding proten HflX [Enterococcus faecium U0317] gi|314938921|ref|ZP_07846188.1| GTP-binding protein HflX [Enterococcus faecium TX0133a04] gi|314943856|ref|ZP_07850589.1| GTP-binding protein HflX [Enterococcus faecium TX0133C] gi|314948096|ref|ZP_07851497.1| GTP-binding protein HflX [Enterococcus faecium TX0082] gi|314951638|ref|ZP_07854683.1| GTP-binding protein HflX [Enterococcus faecium TX0133A] gi|314993856|ref|ZP_07859190.1| GTP-binding protein HflX [Enterococcus faecium TX0133B] gi|314996698|ref|ZP_07861721.1| GTP-binding protein HflX [Enterococcus faecium TX0133a01] gi|68194312|gb|EAN08827.1| GTP-binding protein, HSR1-related [Enterococcus faecium DO] gi|257813821|gb|EEV42579.1| GTP-binding protein [Enterococcus faecium 1,230,933] gi|257818270|gb|EEV45598.1| GTP-binding protein [Enterococcus faecium 1,231,502] gi|257820887|gb|EEV48021.1| GTP-binding protein [Enterococcus faecium 1,231,501] gi|257826621|gb|EEV53247.1| GTP-binding protein [Enterococcus faecium 1,231,410] gi|257829824|gb|EEV56431.1| GTP-binding protein [Enterococcus faecium 1,231,408] gi|260074410|gb|EEW62732.1| GTP-binding protein [Enterococcus faecium C68] gi|291589704|gb|EFF21508.1| GTP-binding proten HflX [Enterococcus faecium E1071] gi|291597342|gb|EFF28522.1| GTP-binding proten HflX [Enterococcus faecium U0317] gi|291600611|gb|EFF30915.1| GTP-binding protein HflX [Enterococcus faecium E1039] gi|291606309|gb|EFF35722.1| GTP-binding proten HflX [Enterococcus faecium E1162] gi|313589136|gb|EFR67981.1| GTP-binding protein HflX [Enterococcus faecium TX0133a01] gi|313591666|gb|EFR70511.1| GTP-binding protein HflX [Enterococcus faecium TX0133B] gi|313596234|gb|EFR75079.1| GTP-binding protein HflX [Enterococcus faecium TX0133A] gi|313597474|gb|EFR76319.1| GTP-binding protein HflX [Enterococcus faecium TX0133C] gi|313641795|gb|EFS06375.1| GTP-binding protein HflX [Enterococcus faecium TX0133a04] gi|313645432|gb|EFS10012.1| GTP-binding protein HflX [Enterococcus faecium TX0082] Length = 409 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 8/113 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGI 216 I IG+IG NAGKST L +T+A D F TL P + EG+ E + D G Sbjct: 193 IFQIGLIGYTNAGKSTILNLLTQADTYSKDQLFATLDPLTKRWRFAEGF-EITVTDTVGF 251 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN 266 I++ + D F L+ ++ +LLH+V A + Q +L + N Sbjct: 252 IQDL--PTQLIDAFHSTLEESQNMDLLLHVVDASSPDRILQEQTVLKLMDELN 302 >gi|330830112|ref|YP_004393064.1| ferrous iron transport protein B [Aeromonas veronii B565] gi|328805248|gb|AEB50447.1| Ferrous iron transport protein B [Aeromonas veronii B565] Length = 757 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 10/134 (7%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGA 224 +G PN+GK++ ++T A+ ++ ++ T+ +G G F L D+PGI A Q Sbjct: 8 VGNPNSGKTSLFNALTGARQQVGNWSGVTVDKKMGEFSAGEHHFKLMDLPGIYSLASQDG 67 Query: 225 G----IGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 I RF ++ +LL+++ A LE ++ Q L EL + K++I+ Sbjct: 68 SLDEQIASRF-AQGQQPDLLLNVIDAANLERSLYLTLQ--LRELGLPMVVVLNKLDILQK 124 Query: 279 SQIDTVDSDTLARK 292 +I +D L + Sbjct: 125 RRI-VIDESKLGKS 137 >gi|331266548|ref|YP_004326178.1| GTPase/GTP-binding protein Era [Streptococcus oralis Uo5] gi|326683220|emb|CBZ00838.1| GTPase/GTP-binding protein Era [Streptococcus oralis Uo5] Length = 299 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEPRGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLSQIDDFRNQMDFKEIVP--ISALQGNNVSRLIDILSENL 169 >gi|193213835|ref|YP_001995034.1| GTP-binding protein Era [Chloroherpeton thalassium ATCC 35110] gi|193087312|gb|ACF12587.1| GTP-binding protein Era [Chloroherpeton thalassium ATCC 35110] Length = 321 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 11/165 (6%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 I+G PNAGKST L + K I P TT LGI + + +L D PGI+K ++ Sbjct: 29 ILGEPNAGKSTLLNVLLGEKISIVTPKPQTTRKRVLGIFTDKSCQIVLLDTPGIMKPKYK 88 Query: 223 -GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQI 281 + D K E + VL+ ++ E Q + +L+ KK I+ L+++ Sbjct: 89 LHEAMLDLADKSVEDSDVLVLLLDV--EKYQKGKAELKADLAFQRIANTKKPVILVLNKV 146 Query: 282 DTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECL 322 D + D +A + PF S++ G+ I + L+ + Sbjct: 147 DLITKDA---SLELIAKFSSEYPFREIVPLSALKGYNIREFLKAV 188 >gi|187778158|ref|ZP_02994631.1| hypothetical protein CLOSPO_01750 [Clostridium sporogenes ATCC 15579] gi|187775086|gb|EDU38888.1| hypothetical protein CLOSPO_01750 [Clostridium sporogenes ATCC 15579] Length = 718 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 14/161 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I ++G PN GK+T +T + + ++P T+ G +K+ +K+ + D+PGI + Sbjct: 6 IALVGNPNCGKTTMFNYLTGSSQYVGNWPGVTVEKKEGKLKQ-HKDVKVIDLPGIYSLSP 64 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ V+++IV + LE N+ + Q + EL + I+ L Sbjct: 65 YTLEEVITRNYLIGEKPEVIINIVDGTNLERNLYLSTQVM---------ELGIPV-IIAL 114 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 + +D V + K++L G E S++ G G +++ Sbjct: 115 NMMDIVRKNGDIIDKDKLGKSMGCTVVETSALKGDGCKELI 155 >gi|315612998|ref|ZP_07887909.1| GTP-binding protein Era [Streptococcus sanguinis ATCC 49296] gi|315315108|gb|EFU63149.1| GTP-binding protein Era [Streptococcus sanguinis ATCC 49296] Length = 299 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEPRGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLSQIDDFRNQMDFKEIVP--ISALQGNNVSRLIDILSENL 169 >gi|295098744|emb|CBK87833.1| small GTP-binding protein domain [Eubacterium cylindroides T2-87] Length = 382 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 30/54 (55%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 +G IG PN GK+T + T A K+A++P T+ G +KE + D+PG Sbjct: 7 VGFIGNPNCGKTTLFNAYTGANLKVANWPGVTVERMEGAIKEHNMTIHVVDLPG 60 >gi|15642826|ref|NP_227867.1| iron(II) transport protein B [Thermotoga maritima MSB8] gi|281412111|ref|YP_003346190.1| ferrous iron transport protein B [Thermotoga naphthophila RKU-10] gi|4980537|gb|AAD35145.1|AE001692_2 iron(II) transport protein B [Thermotoga maritima MSB8] gi|281373214|gb|ADA66776.1| ferrous iron transport protein B [Thermotoga naphthophila RKU-10] Length = 669 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 23/181 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I + + G PN GK++ ++T K +A++P T+ G+ L D+PG Sbjct: 16 IVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKGYTINLIDLPGTYS 75 Query: 219 NAHQGAGIGDRFLKHTERTHVL-----LHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 + + R ++L L I+ A N + + +L+ L E+ KK+ Sbjct: 76 LGYSSID------EKIARDYLLKGDADLVILVADSVNPEQSLYLLLEIL-----EMEKKV 124 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILECLHDKIFSIRGE 332 I+ ++ ID + + EL G +P F SS+TG G LE L +KI + Sbjct: 125 -ILAMTAIDEAKKTGMKIDRYELQKHLG-IPVVFTSSVTGEG----LEELKEKIVEYAQK 178 Query: 333 N 333 N Sbjct: 179 N 179 >gi|332187715|ref|ZP_08389450.1| ferrous iron transport protein B [Sphingomonas sp. S17] gi|332012281|gb|EGI54351.1| ferrous iron transport protein B [Sphingomonas sp. S17] Length = 619 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 28/148 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPG----- 215 + ++G PNAGKS ++T A+ K+ +YP T+ + G +V + + L D+PG Sbjct: 7 VALVGNPNAGKSALFNALTGARQKVGNYPGVTVERHSGRLVLDDGRPVELVDLPGAYSLD 66 Query: 216 -------IIKNAHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYN 266 + +N G+ G+R R L+ +V A L+ +++ A Q I A Sbjct: 67 PGSLDEQVTRNVVMGSQAGER------RPDALVVVVDAANLDNHLRFALQLI-----ALG 115 Query: 267 SELRKKIEIVGLSQID--TVDSDTLARK 292 + + +V L++ D T+D + L+R+ Sbjct: 116 LPVVIALNMVDLAERDGLTLDPEVLSRE 143 >gi|325283649|ref|YP_004256190.1| GTP-binding protein engA [Deinococcus proteolyticus MRP] gi|324315458|gb|ADY26573.1| GTP-binding protein engA [Deinococcus proteolyticus MRP] Length = 441 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 20/168 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRA-KPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKN 219 I +IG PN GKS+ L ++T++ + +AD P TT +L + + G + F+L D GI K Sbjct: 175 ISLIGRPNVGKSSLLNAITQSDRAIVADVPGTT-RDSLDVEWDYGGQRFVLVDTAGIRKK 233 Query: 220 AHQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 I D ++ + ER+ ++ +++A + ++ L L AY+S K I Sbjct: 234 P--DTAIEDYAIQRSQAAIERSDLIWLVLNA---DDLGDHELKLANL-AYDS---GKPVI 284 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQIL 319 V +++ D V + L R + EL + + + S+I +GI +L Sbjct: 285 VVVNKWDLVPDEDLKRAEKELDQKLFHIAYAPRVYTSAINDYGIHDML 332 >gi|262304259|gb|ACY44722.1| GTP-binding protein [Plathemis lydia] Length = 281 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCI---LDELSAYN 266 + DI G++K A +G G+G+ FL H + + H+ A ++ + +LS + Sbjct: 35 VVDIAGLVKGASEGQGLGNAFLSHIKACDAIFHLCRAFDDVDVVHVDGEVDPVRDLSIIS 94 Query: 267 SELRKKIEIVGLSQIDTVDSDTL 289 ELR K E V L ID ++ L Sbjct: 95 EELRLKDEEVLLQVIDKMERTVL 117 >gi|224457694|ref|ZP_03666167.1| GTPase ObgE [Francisella tularensis subsp. tularensis MA00-2987] Length = 56 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 4/47 (8%) Query: 95 QVFEEDGI----SLICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQA 137 Q+ E GI I ++ Q GQ L GG G GN HFKSSTNQA Sbjct: 10 QILEWSGIDSTNKKIGEVLQHGQTFKLVSGGKRGIGNTHFKSSTNQA 56 >gi|207110540|ref|ZP_03244702.1| translation-associated GTPase [Helicobacter pylori HPKX_438_CA4C1] Length = 97 Score = 40.0 bits (92), Expect = 0.52, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 5/66 (7%) Query: 207 EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN 266 EF+ DI G+IK A +G G+G++FL + + V+L +V E++ + D++ N Sbjct: 33 EFV--DIAGLIKGASKGEGLGNQFLANIKECEVILQVVRCFEDD---NITHVNDKIDPLN 87 Query: 267 SELRKK 272 E+R K Sbjct: 88 DEIRFK 93 >gi|196228260|ref|ZP_03127127.1| small GTP-binding protein [Chthoniobacter flavus Ellin428] gi|196227663|gb|EDY22166.1| small GTP-binding protein [Chthoniobacter flavus Ellin428] Length = 283 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 12/166 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGII 217 + + I+G NAGKS+ L +T A I D F TL I + +L D G + Sbjct: 42 VPNAAIVGYTNAGKSSLLRRLTGADVLIEDKLFATLDTTTRKIALPNKQPLLLTDTVGFV 101 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + H+ + L+ + L+H++ A + V Y + L+ ++ ++ ++ Sbjct: 102 RKLPHRLVEAFNATLEEAALSDFLIHLLDASQPEVMEYYNTTMKVLAELGADAKRT--LI 159 Query: 277 GLSQIDTV-DSDTLARKKNELATQCGQVPFEFSSI-TGHGIPQILE 320 ++ID V DS LA + F S+ TG GI +++E Sbjct: 160 AFNKIDKVGDSAALAGLRRHFPDAV------FLSVHTGEGIEELVE 199 >gi|254386099|ref|ZP_05001413.1| ATP/GTP-binding protein [Streptomyces sp. Mg1] gi|194344958|gb|EDX25924.1| ATP/GTP-binding protein [Streptomyces sp. Mg1] Length = 510 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 17/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I G NAGKS+ L +T A + + F TL P + + + + LAD G + Sbjct: 288 VPSVAIAGYTNAGKSSLLNRLTGAGVLVENALFATLDPTVRRAETPSGRIYTLADTVGFV 347 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVS----ALEENVQAAYQCILDELSAYNSELRKK 272 ++ H ++ + ++LHIV A EE + AA + ++ E+ A N Sbjct: 348 RHLPHHLVEAFRSTMEEVGDSDLILHIVDGSHPAPEEQL-AAVREVIREVGAVNVP---- 402 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EIV +++ D D L R + + S+ TG GI ++LE + ++ Sbjct: 403 -EIVVINKADAADPLVLQR-----LLRIERHSIAVSARTGMGIAKLLELIDTEL 450 >gi|162447802|ref|YP_001620934.1| GTP-binding protein [Acholeplasma laidlawii PG-8A] gi|161985909|gb|ABX81558.1| GTP-binding protein [Acholeplasma laidlawii PG-8A] Length = 295 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 9/65 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-----PKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 I IIG PN GKST + ++ K PK+ TT + GI+ EG +F+ D PG+ Sbjct: 8 IAIIGKPNVGKSTLINALIGEKIAITSPKVQ----TTRFRITGILNEGENQFVFIDTPGM 63 Query: 217 IKNAH 221 K H Sbjct: 64 HKPYH 68 >gi|87118655|ref|ZP_01074554.1| GTP-binding protein Era [Marinomonas sp. MED121] gi|86166289|gb|EAQ67555.1| GTP-binding protein Era [Marinomonas sp. MED121] Length = 348 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L V K I P TT LG+ +G+ + I D PG+ Sbjct: 60 VAIVGRPNVGKSTLLNHVLGQKLSITSRKPQTTRQQILGVKSQGHVQTIYVDTPGM---- 115 Query: 221 HQG-AGIGDRFLKHT 234 H G A +RF+ T Sbjct: 116 HLGEAKAINRFMNKT 130 >gi|296114949|ref|ZP_06833595.1| GTP-binding protein hflX [Gluconacetobacter hansenii ATCC 23769] gi|295978507|gb|EFG85239.1| GTP-binding protein hflX [Gluconacetobacter hansenii ATCC 23769] Length = 436 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 25/177 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + ++G NAGKST ++T A D F TL P + GI ++ IL+D G I + Sbjct: 208 VALVGYTNAGKSTLFNALTGASVYAQDQLFATLDPTMRGIRLPSGRQIILSDTVGFISDL 267 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 R L+ ++LH+ A E SA +++ + +E G++ Sbjct: 268 PTELIAAFRATLEEVAEADIILHVRDASHP-----------ETSAQRADVVEVLE--GMA 314 Query: 280 QIDTVDSDTLAR-----KKNELA---TQCGQVP--FEFSSITGHGIPQILECLHDKI 326 T++ D +R K +L G P S+ITG G+P +L + +++ Sbjct: 315 HSGTIEPDWQSRVIEVLNKADLMGGRDAVGARPGAIVISAITGDGLPDLLAAIDERL 371 >gi|295103185|emb|CBL00729.1| ferrous iron transporter FeoB [Faecalibacterium prausnitzii SL3/3] Length = 728 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 18/158 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K G K+ ++ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNNLTGSNQYVGNWPGVTVEKKEGKLK-GDKDVVIQDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ +L+I+ + +E N+ Q I EL + ++ + Sbjct: 64 YTLEEVVSRTYLVKEKPDAILNIIDGTNIERNLYLTTQLI---------ELGIPV-VMAV 113 Query: 279 SQIDTV--DSDTLARKKNELATQCGQVPFEFSSITGHG 314 + ID V + DT+ KK L+ + G E S++ G G Sbjct: 114 NMIDLVRKNGDTIDLKK--LSAELGCQAVEISALKGEG 149 >gi|260907227|ref|ZP_05915549.1| GTP-binding proten HflX [Brevibacterium linens BL2] Length = 491 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 4/91 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 I + I+G NAGKS+ L +T A+ + + F TL P + +G F D G Sbjct: 265 IPSVAIVGYTNAGKSSLLNQLTDAEVMVQNALFATLDPTVRQSRTADGIT-FTYTDTVGF 323 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSA 246 ++N HQ L+ + +LLHIV A Sbjct: 324 VRNLPHQLVEAFRSTLEEASDSDLLLHIVDA 354 >gi|326203513|ref|ZP_08193377.1| GTP-binding protein Era [Clostridium papyrosolvens DSM 2782] gi|325986333|gb|EGD47165.1| GTP-binding protein Era [Clostridium papyrosolvens DSM 2782] Length = 298 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + +IG PN GKST L ++T K I +D P TT G++ + IL D PGI Sbjct: 8 VSVIGRPNVGKSTLLNTITGQKIAIMSDKPQTTRNTIRGVITNKECQLILIDTPGI 63 >gi|159028083|emb|CAO87160.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 774 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 17/161 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I +IG PN GK+T ++T A + ++P T+ G + K+ L D+PG+ + Sbjct: 6 IALIGNPNCGKTTLFNALTGANQRTGNWPGVTVDRKEGRFQVNGKDITLVDLPGVYSLDV 65 Query: 221 HQGAGIGDRFLKH----TERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 +G D + + ++++IV A LE N+ Q + E+R + Sbjct: 66 EEGETGMDELVARDYLLSGEADLVINIVDASNLERNLYLTTQIM---------EMRLPM- 115 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 ++ L+ +D + + L+ + + S++ G GI Sbjct: 116 LIALNMMDVAKTRGIVVNPQLLSVRMDAIVVAISAVKGEGI 156 >gi|154509064|ref|ZP_02044706.1| hypothetical protein ACTODO_01581 [Actinomyces odontolyticus ATCC 17982] gi|153798698|gb|EDN81118.1| hypothetical protein ACTODO_01581 [Actinomyces odontolyticus ATCC 17982] Length = 512 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 12/172 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I G NAGKST L +T A + D F TL P + + +E+ L D G + Sbjct: 280 VPSVVIAGYTNAGKSTLLNRLTDAGVLVQDALFATLDPTVRRARAADGREYTLTDTVGFV 339 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN--SELRKKIE 274 +N Q L+ + ++LH+V A + + Q + + SE+ E Sbjct: 340 RNLPTQLVEAFRSTLEEVGQADIILHVVDAAHPDPVSQVQAVCSVIDTIEGASEI---PE 396 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ L++ D + +A + VP S+ TG G+ + L D + Sbjct: 397 LIALNKADLASPEQIALLRTVFP---NAVP--LSAHTGWGVEALRAALEDML 443 >gi|20093125|ref|NP_619200.1| ferrous iron transport protein B [Methanosarcina acetivorans C2A] gi|19918463|gb|AAM07680.1| ferrous iron transport protein B [Methanosarcina acetivorans C2A] Length = 659 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 5/93 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + IG P+ GKS F + +T ++++YP TT+ G VK K + D+PGI + Sbjct: 25 LAFIGNPSVGKSVFFSRLTGVGVEVSNYPGTTVALIRGSVKARGKTVEVVDLPGIYSLGV 84 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEEN 250 A++ + RFL +R V+++I+ A LE N Sbjct: 85 ANEDEKVTKRFLIE-DRPDVIVNILDASRLERN 116 >gi|332291510|ref|YP_004430119.1| GTP-binding proten HflX [Krokinobacter diaphorus 4H-3-7-5] gi|332169596|gb|AEE18851.1| GTP-binding proten HflX [Krokinobacter diaphorus 4H-3-7-5] Length = 409 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 10/115 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + + ++G N GKST + ++++K + F TL + V G F+L+D G I+ Sbjct: 199 LVRVALVGYTNVGKSTLMNVISKSKVFAENKLFATLDTTVRKVVVGNLPFLLSDTVGFIR 258 Query: 219 NAHQGAGIGDRF---LKHTERTHVLLHIVS----ALEENVQAAYQCILDELSAYN 266 + D F L +LLH+V E+++ A Q ILDE+ + + Sbjct: 259 KL--PTQLVDSFKSTLDEVREADLLLHVVDISHPQFEDHINAVNQ-ILDEIESMD 310 >gi|326495090|dbj|BAJ85641.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326510693|dbj|BAJ87563.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 592 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 22/117 (18%) Query: 146 LGQEKIIWL--------KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN 197 LG E +I L +LKL +GI+GLPN GKS+ + S+ R++ + Sbjct: 234 LGAENLIKLLKNYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSR-------VVNVGST 286 Query: 198 LGIVKEGY-----KEFILADIPGII--KNAHQGAGIGDRFLKHTERTHVLLHIVSAL 247 G+ + K+ L D PG++ ++A G + R K E+ ++ V + Sbjct: 287 PGVTRSMQEVQLDKKVKLLDCPGVVMLRSASSGVSVALRNCKRVEKMEDVITPVKEI 343 >gi|325272131|ref|ZP_08138563.1| GTP-binding protein Der [Pseudomonas sp. TJI-51] gi|324102727|gb|EGC00142.1| GTP-binding protein Der [Pseudomonas sp. TJI-51] Length = 487 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 11/167 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +T+ + I D T G + FIL D GI Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGI 60 Query: 217 I-KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + ++ L E +L +V A + AA Q I + L N E I Sbjct: 61 TGDEVGMDEKMAEQSLMAIEEADYVLFLVDA-RAGMTAADQMIAEHLRKRNKE-----AI 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + ++ID +D+D +AR + +P S G GI ++E + Sbjct: 115 LVANKIDNIDAD-VARAEFSPLGMGNAIPVAGSQ--GRGINALMEAV 158 >gi|284048899|ref|YP_003399238.1| ferrous iron transport protein B [Acidaminococcus fermentans DSM 20731] gi|283953120|gb|ADB47923.1| ferrous iron transport protein B [Acidaminococcus fermentans DSM 20731] Length = 721 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 14/159 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G + G+ + I+ D+PGI + Sbjct: 5 IALAGNPNTGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLM-GHPDVIIQDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ER +L+IV + LE N+ LS +EL + ++ + Sbjct: 64 YTLEEVVSRTYLVKERPDAILNIVDGTNLERNLY---------LSTQLAELGIPM-VMAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQ 317 + +D V S+ ++L+ + G E S+ TG GI + Sbjct: 114 NMMDMVRSNGDIINIDKLSQKMGCQVIEISARTGEGIKE 152 >gi|261210006|ref|ZP_05924305.1| ferrous iron transport protein B [Vibrio sp. RC341] gi|260840952|gb|EEX67489.1| ferrous iron transport protein B [Vibrio sp. RC341] Length = 758 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 19/145 (13%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G EF+L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGRFTHAGDEFLLTDLPGIYALDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH V++++V A LE ++ Q ELR+ + IV Sbjct: 68 DNSIDESIASRAVLTHPADVIINVVDATCLERSLYMTLQL---------RELRRPM-IVV 117 Query: 278 LSQIDTVDSDT--LARKKNELATQC 300 L+++D + + L K+ EL C Sbjct: 118 LNKMDALKRERVHLDLKQLELFLGC 142 >gi|271501567|ref|YP_003334593.1| ribosome-associated GTPase EngA [Dickeya dadantii Ech586] gi|270345122|gb|ACZ77887.1| ribosome-associated GTPase EngA [Dickeya dadantii Ech586] Length = 498 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 10/134 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGNEFIIIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I G + ++ L E ++L +V A + + A Y A + R+K Sbjct: 60 IDGTEDGVETRMAEQSLLAIEEADIVLFLVDARDGLMPADYAI------AQHLRSREKDT 113 Query: 275 IVGLSQIDTVDSDT 288 + +++D +D DT Sbjct: 114 FLVANKVDGIDIDT 127 >gi|229826082|ref|ZP_04452151.1| hypothetical protein GCWU000182_01447 [Abiotrophia defectiva ATCC 49176] gi|229789824|gb|EEP25938.1| hypothetical protein GCWU000182_01447 [Abiotrophia defectiva ATCC 49176] Length = 414 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 9/108 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGII-K 218 I I+G NAGKSTFL +T A D F TL P +K +G +E + D G I K Sbjct: 200 IAIVGYTNAGKSTFLNKITDAGILAEDKLFATLDPTTRSLKIPDG-EEVLFTDTVGFISK 258 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDEL 262 H L+ + ++LH+ A ++E ++ Y+ L+EL Sbjct: 259 LPHNLVDAFKSTLEEAKYADLILHVADASNPEVDEQMKVVYRT-LEEL 305 >gi|226942903|ref|YP_002797976.1| GTP-binding protein HflX [Azotobacter vinelandii DJ] gi|226717830|gb|ACO77001.1| GTP-binding protein HflX [Azotobacter vinelandii DJ] Length = 433 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 2/103 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T + A+ F TL P L ++ + +LAD G I Sbjct: 198 IPLVSLVGYTNAGKSTLFNALTASGVYAANQLFATLDPTLRRLELDDLGALVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL 259 ++ H+ L+ + + +LLH++ A E A + ++ Sbjct: 258 RHLPHKLVEAFRATLEESSNSDLLLHVIDAHEPERMAQIEQVM 300 >gi|301788600|ref|XP_002929716.1| PREDICTED: guanine nucleotide-binding protein-like 3-like protein-like isoform 1 [Ailuropoda melanoleuca] Length = 574 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGY-KEFI-LADIPGIIK 218 +G++GLPN GKS+ + S+ R++ + P T + ++E Y +FI L D PGI+ Sbjct: 248 VGVVGLPNVGKSSLINSLKRSRACSVGAVPGITKF-----MQEVYLDKFIRLLDAPGIVP 302 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + G R H ++ L V+ +E +Q +C L+E+S Y Sbjct: 303 GPNSEVGTILRNCVHVQK---LADPVTPVETILQ---RCNLEEISNY 343 >gi|296269123|ref|YP_003651755.1| GTP-binding proten HflX [Thermobispora bispora DSM 43833] gi|296091910|gb|ADG87862.1| GTP-binding proten HflX [Thermobispora bispora DSM 43833] Length = 501 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 8/163 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + I G NAGKS+ L +T A + D F TL P + + + F LAD G +++ Sbjct: 279 VAIAGYTNAGKSSLLNRLTGAGVLVEDALFATLDPTVRRARTPDGRVFTLADTVGFVRHL 338 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 HQ L+ ++LH+V + ++ + + L EI+ ++ Sbjct: 339 PHQLVEAFRSTLEEVADADLILHVVDGSHPDPESQIAAVRKVFAEIEGAL-DIPEIIVIN 397 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + D D LAR + + S+ TG GI ++LE + Sbjct: 398 KADIADPVVLAR-----LSAKERHSVVVSARTGEGIDRLLEAI 435 >gi|119613590|gb|EAW93184.1| guanine nucleotide binding protein-like 3 (nucleolar)-like, isoform CRA_b [Homo sapiens] Length = 516 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGY-KEFI-LADIPGIIK 218 +G++GLPN GKS+ + S+ R++ + P T + ++E Y +FI L D PGI+ Sbjct: 189 VGVVGLPNVGKSSLINSLKRSRACSVGAVPGITKF-----MQEVYLDKFIRLLDAPGIVP 243 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + G R H ++ L V+ +E +Q +C L+E+S Y Sbjct: 244 GPNSEVGTILRNCVHVQK---LADPVTPVETILQ---RCNLEEISNY 284 >gi|77362053|ref|YP_341627.1| GTP-binding protein EngA [Pseudoalteromonas haloplanktis TAC125] gi|123744148|sp|Q3ICZ9|DER_PSEHT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|76876964|emb|CAI89181.1| GTP-binding protein, essential for cell growth in E. coli and B. subtilis, regulates ribosome synthesis [Pseudoalteromonas haloplanktis TAC125] Length = 487 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 13/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST +TR + +AD+P T G EFI+ D G I + Sbjct: 5 IALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYDGYEFIVVDTGG-IDGS 63 Query: 221 HQGAGI--GDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G I D+ L E ++L +V A + A Q I + L + KK +V Sbjct: 64 EEGIEIEMADQSLLAIEEADIVLFLVDA-RVGMTVADQAIANHL----RKQEKKCFVVA- 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L+ G++ ++ G GI +LE Sbjct: 118 NKTDGIDADSNCAEFYQLS--LGEI-HHIAASHGRGITLLLE 156 >gi|312143999|ref|YP_003995445.1| GTP-binding protein Era [Halanaerobium sp. 'sapolanicus'] gi|311904650|gb|ADQ15091.1| GTP-binding protein Era [Halanaerobium sp. 'sapolanicus'] Length = 293 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 30/178 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PN GKST + ++ K I+ P TT I E + I D PGI Sbjct: 8 VTVIGRPNVGKSTLVNNLVGEKINIISPRPQTTRNSIKAIYTEEKGQIIFIDTPGI---- 63 Query: 221 HQGAGIGDRFLKHTERTH-----VLLHIVSALEENVQAAY-----QCILDELSAYNSELR 270 HQ D+F+ + +++ I+ A + Y Q I D++ + Sbjct: 64 HQARNKLDKFMLEEAYSSLDGIDIIIFILDA------STYWGKNDQMIYDQIKS-----S 112 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 KK I +++ID + + L ++ + + + G+ S++ I +LE +IFS Sbjct: 113 KKNIIYVMNKIDKISNKDLLLRQKKYSQKVGEEVIPISALNNKNIDTLLE----EIFS 166 >gi|301788602|ref|XP_002929717.1| PREDICTED: guanine nucleotide-binding protein-like 3-like protein-like isoform 2 [Ailuropoda melanoleuca] Length = 581 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGY-KEFI-LADIPGIIK 218 +G++GLPN GKS+ + S+ R++ + P T + ++E Y +FI L D PGI+ Sbjct: 255 VGVVGLPNVGKSSLINSLKRSRACSVGAVPGITKF-----MQEVYLDKFIRLLDAPGIVP 309 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + G R H ++ L V+ +E +Q +C L+E+S Y Sbjct: 310 GPNSEVGTILRNCVHVQK---LADPVTPVETILQ---RCNLEEISNY 350 >gi|297617295|ref|YP_003702454.1| GTP-binding protein YchF [Syntrophothermus lipocalidus DSM 12680] gi|297145132|gb|ADI01889.1| GTP-binding protein YchF [Syntrophothermus lipocalidus DSM 12680] Length = 352 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 16/102 (15%) Query: 162 IGIIGLPNAGKSTFL-------------ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF 208 +G++GLP +GK+T A + +A ++ D L K Y + Sbjct: 3 LGLVGLPQSGKTTLFQLLTEARGNGAYGARIEKAVVRVPDRRVDFLARLYQPRKTTYAQL 62 Query: 209 ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DIPG++ + + A + FL+ T L+H+V A ++ Sbjct: 63 EVIDIPGLVPGSEKEASV---FLQSVRDTDALVHVVRAFADD 101 >gi|224373216|ref|YP_002607588.1| GTP-binding protein [Nautilia profundicola AmH] gi|223588958|gb|ACM92694.1| GTP-binding protein [Nautilia profundicola AmH] Length = 189 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 14/146 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPG-- 215 ++ ++G N GKS+FL + T K K + P T N V++ K+++L D+PG Sbjct: 20 FTEVALLGRSNVGKSSFLNAFTNQKIAKTSQTPGKTRLINFFEVEDDGKKYVLVDLPGFG 79 Query: 216 ---IIKNAHQGAGIG-DRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY-NSELR 270 + K+ + G D FLK+ + +H+ A ++ I + + Y NS R Sbjct: 80 YAKVSKSMLKDWGKNLDEFLKNRFNIKLFIHLRDARHPDLD-----IDNNVDEYINSFKR 134 Query: 271 KKIEIVGL-SQIDTVDSDTLARKKNE 295 K +++ + ++ID + LA+ K + Sbjct: 135 KDQQLLTIFTKIDKLKQSELAKLKQK 160 >gi|85712733|ref|ZP_01043778.1| GTP-binding protein EngA [Idiomarina baltica OS145] gi|85693465|gb|EAQ31418.1| GTP-binding protein EngA [Idiomarina baltica OS145] Length = 479 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 17/165 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D GI + Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYDGYQFIVVDTGGIHGDE 64 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 GI + K + E V+L +V A + V Q I L + +KK+ +V Sbjct: 65 E---GIDEVMAKQSLQAIEEADVVLFLVDA-RDGVTVGDQAIATHL----RKQKKKVYLV 116 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 ++ID +D+D+ LA G + + ++ G G+ +L+ Sbjct: 117 A-NKIDGIDADSAMADFYSLA--LGNL-YGIAAAHGRGVEHLLDS 157 >gi|320539280|ref|ZP_08038950.1| ribosome-associated GTPase [Serratia symbiotica str. Tucson] gi|320030672|gb|EFW12681.1| ribosome-associated GTPase [Serratia symbiotica str. Tucson] Length = 495 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 17/168 (10%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I+ + ++G PN GKST +T+ + +AD+P T G + EFI+ D GI Sbjct: 1 MISVVALVGRPNVGKSTLFNRLTQTRDALVADFPGLTRDRKYGRAEVEGNEFIIVDTGGI 60 Query: 217 IKNAHQGAGIGDRF----LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 + H+ G+ R L E ++L +V A + A Q I L R+K Sbjct: 61 --DGHED-GVETRMAGQSLLAIEEADIVLFMVDA-RAGLMPADQGIAQHLRN-----RQK 111 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +++ D +D D + L G+V + ++ G G+ Q++E Sbjct: 112 ATFLVVNKTDGLDPDVVTADFYSLG--LGEV-YAIAASHGRGVRQLIE 156 >gi|313678251|ref|YP_004055991.1| GTP-binding protein Era [Mycoplasma bovis PG45] gi|312950737|gb|ADR25332.1| GTP-binding protein Era [Mycoplasma bovis PG45] Length = 290 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 10/166 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I+G PN GKS+ L + + I ++ P TT +G+ E +F+ D PGI K Sbjct: 6 ISILGRPNVGKSSLLNKIIKYDLAIVSNVPQTTRDQIMGVYTENDYQFVFVDTPGIHKPL 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + G + +L + + + E +++ + IL+ ++ K +I +S Sbjct: 66 NLLGESLNKEAFSSINDIDCILFL-TPVNEEIKSGDKLILERIA------NSKNKIAVIS 118 Query: 280 QIDTVDS-DTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 +ID S D +++K L Q S+ I ++E L + Sbjct: 119 KIDLAKSPDDISKKIKSLEEFNFQKIISVSNKNDKSIDSLIEILKE 164 >gi|254779461|ref|YP_003057566.1| GTP-binding protein Era [Helicobacter pylori B38] gi|254001372|emb|CAX29357.1| GTP-binding protein era homolog [Helicobacter pylori B38] Length = 301 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 25/173 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYK-EFILADIPG 215 + +IG PNAGKST L ++ A + + + + KEGY+ + I D PG Sbjct: 8 VALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPG 67 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS--ELRKKI 273 + HQ ++ L + L I A ++ + D+L Y L +K Sbjct: 68 L---HHQ-----EKLLNQCMLSQALKAIGDA---ELRVFLASVHDDLKGYEEFLSLCQKP 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECL 322 I+ LS+IDT + +K E Q VP S+ + +LEC+ Sbjct: 117 HILALSKIDTATHKQVLQKLQEYQQYDSQFLALVP--LSAKKSQNLNALLECI 167 >gi|199582300|gb|ACH89821.1| putative GDP binding protein [Alpheus estuariensis] Length = 218 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + + H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDAIFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE--------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 DEL + E L K +E G ++ + DT+ R KN L + V F Sbjct: 63 DELRLKDIEYINNVWDKLYKLVERGGDKKLKP-EYDTICRVKNLLEEEKRHVRF 115 >gi|126666952|ref|ZP_01737928.1| GTPase [Marinobacter sp. ELB17] gi|126628668|gb|EAZ99289.1| GTPase [Marinobacter sp. ELB17] Length = 432 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 5/108 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + ++G NAGKST +T + AD F TL P + ++ ILAD G I++ Sbjct: 200 VSLVGYTNAGKSTLFNRITSSDVYTADQLFATLDPTMRRLELPDIGAVILADTVGFIRHL 259 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSA 264 H+ L+ T +LLH++ +E A + +L E+ A Sbjct: 260 PHKLVESFRATLEETNEAALLLHVIDCHDERRDDNIAQVENVLAEIGA 307 >gi|9506611|ref|NP_061940.1| guanine nucleotide-binding protein-like 3-like protein [Homo sapiens] gi|296317324|ref|NP_001171748.1| guanine nucleotide-binding protein-like 3-like protein [Homo sapiens] gi|74752999|sp|Q9NVN8|GNL3L_HUMAN RecName: Full=Guanine nucleotide-binding protein-like 3-like protein gi|7022755|dbj|BAA91712.1| unnamed protein product [Homo sapiens] gi|15079836|gb|AAH11720.1| GNL3L protein [Homo sapiens] gi|57162510|emb|CAI40396.1| guanine nucleotide binding protein-like 3 (nucleolar)-like [Homo sapiens] gi|119613588|gb|EAW93182.1| guanine nucleotide binding protein-like 3 (nucleolar)-like, isoform CRA_a [Homo sapiens] gi|119613589|gb|EAW93183.1| guanine nucleotide binding protein-like 3 (nucleolar)-like, isoform CRA_a [Homo sapiens] gi|119613591|gb|EAW93185.1| guanine nucleotide binding protein-like 3 (nucleolar)-like, isoform CRA_a [Homo sapiens] Length = 582 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGY-KEFI-LADIPGIIK 218 +G++GLPN GKS+ + S+ R++ + P T + ++E Y +FI L D PGI+ Sbjct: 255 VGVVGLPNVGKSSLINSLKRSRACSVGAVPGITKF-----MQEVYLDKFIRLLDAPGIVP 309 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + G R H ++ L V+ +E +Q +C L+E+S Y Sbjct: 310 GPNSEVGTILRNCVHVQK---LADPVTPVETILQ---RCNLEEISNY 350 >gi|258545977|ref|ZP_05706211.1| GTP-binding protein HflX [Cardiobacterium hominis ATCC 15826] gi|258518782|gb|EEV87641.1| GTP-binding protein HflX [Cardiobacterium hominis ATCC 15826] Length = 430 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 2/88 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGII 217 I + + G N+GKST ++T A D F TL P ++ G + ++AD G + Sbjct: 197 IPTVALAGYTNSGKSTLFNTLTEADVYAQDQLFATLDPTWRKLQHSGPQTILMADTVGFV 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIV 244 + H+ L+ T R +LLH++ Sbjct: 257 SDLPHELVAAFSATLEETARADLLLHVI 284 >gi|104783262|ref|YP_609760.1| GTP-binding protein Era [Pseudomonas entomophila L48] gi|122402119|sp|Q1I5V9|ERA_PSEE4 RecName: Full=GTPase Era gi|95112249|emb|CAK16976.1| GTP-binding protein,16S rRNA-binding,ribosome-associated GTPase [Pseudomonas entomophila L48] Length = 300 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ K Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGDVQAIYVDTPGMHK 69 >gi|15669598|ref|NP_248411.1| GTP1/Obg family GTP-binding protein [Methanocaldococcus jannaschii DSM 2661] gi|37999513|sp|Q58803|Y1408_METJA RecName: Full=Uncharacterized protein MJ1408 gi|2826405|gb|AAB99416.1| GTP-binding protein, member of GTP1/OBG-family [Methanocaldococcus jannaschii DSM 2661] Length = 350 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 4/56 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + I G PN GKST L +T A +I YPFTT N+G + E + D PG++ Sbjct: 173 VVIAGYPNVGKSTLLKKLTGADVEINSYPFTTKGINVGYI----GEIQMVDTPGLL 224 >gi|315127396|ref|YP_004069399.1| GTP-binding protein Era [Pseudoalteromonas sp. SM9913] gi|315015910|gb|ADT69248.1| GTP-binding protein Era [Pseudoalteromonas sp. SM9913] Length = 310 Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +GI EG + + D PG+ Sbjct: 21 VAIVGRPNVGKSTLLNEIIEQKVSITSRKPQTTRHRIMGIHTEGKHQAVYVDTPGL 76 >gi|302845828|ref|XP_002954452.1| hypothetical protein VOLCADRAFT_95251 [Volvox carteri f. nagariensis] gi|300260382|gb|EFJ44602.1| hypothetical protein VOLCADRAFT_95251 [Volvox carteri f. nagariensis] Length = 684 Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust. Identities = 16/61 (26%), Positives = 34/61 (55%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + + ++G PN GKS+ + ++ P++ +YPFTT +G ++ + D PG+++ Sbjct: 417 LPTLALVGAPNVGKSSLVNILSSGTPEVCNYPFTTRSIKMGHFYLDAQKHQVTDTPGLLR 476 Query: 219 N 219 Sbjct: 477 R 477 >gi|289525420|emb|CBJ14897.1| putative nucleotide-binding protein [Chlamydia trachomatis Sweden2] gi|296434973|gb|ADH17151.1| putative nucleotide-binding protein [Chlamydia trachomatis E/150] gi|296438693|gb|ADH20846.1| putative nucleotide-binding protein [Chlamydia trachomatis E/11023] Length = 447 Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 16/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I +IG N+GKST L +T A + F TL P V + +L D G I Sbjct: 226 IPTFALIGYTNSGKSTLLNLLTSADTYAENKLFATLDPKTRRCVLPCGQRVLLTDTVGFI 285 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 + H L+ + +LLH+V A E+V+ + IL EL ++ Sbjct: 286 RKLPHTLVAAFKSTLEAALQEDILLHVVDASHPLALEHVETT-KAILQELGITQPQV--- 341 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I L+++D V A + ++ P S+ TG GI ++L + D + Sbjct: 342 --ITVLNKMDKVADGVTASRLRLMSPN----PVCVSAKTGEGIRELLRSMEDMV 389 >gi|25028740|ref|NP_738794.1| GTP-binding protein Era [Corynebacterium efficiens YS-314] gi|23494026|dbj|BAC18994.1| putative GTP-binding protein [Corynebacterium efficiens YS-314] Length = 323 Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 35/161 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI---- 216 + +G PN GKST ++ K I AD P TT +P G+V + I+ D PG+ Sbjct: 33 VSFVGRPNTGKSTLTNALVGEKIAITADQPETTRHPIRGLVHREDAQIIVVDTPGLHRPR 92 Query: 217 ----------IKNAHQGA-------------GIGDRFLKHTERTHV----LLHIVSALEE 249 +K+ + G GDR++ RT ++ IV+ ++ Sbjct: 93 TLLGERLNESVKDTYSDVDLIGLTIPATDKIGPGDRWILDAVRTAAPKTPIVGIVTKID- 151 Query: 250 NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLA 290 +A++ + +L A + L + E+V +S + DTLA Sbjct: 152 --KASWDQVAAQLMAVHELLGGESEVVPVSSASGENIDTLA 190 >gi|83858197|ref|ZP_00951719.1| GTP-binding protein Era [Oceanicaulis alexandrii HTCC2633] gi|83853020|gb|EAP90872.1| GTP-binding protein Era [Oceanicaulis alexandrii HTCC2633] Length = 307 Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 40/149 (26%) Query: 162 IGIIGLPNAGKSTFLAS-----VTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + IIG PNAGKST + + V+ PK+ TT + G++ G + +L D PG+ Sbjct: 12 VAIIGAPNAGKSTLVNALVGRKVSIVTPKVQ----TTRFQVRGVMMHGSAQLVLVDTPGV 67 Query: 217 -----------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA-----YQCILD 260 + +A +GA D ++H+V A + QA + ++D Sbjct: 68 FAPRRRLDRAMVASAWEGADDAD----------AIVHVVDAAAQLSQARRTVEDVERVID 117 Query: 261 ELSAYNSELRKKIEIVGLSQIDTVDSDTL 289 L A+ EL+ ++ L++ID + + L Sbjct: 118 GLKAH--ELKA---VLVLNKIDLIKREEL 141 >gi|332254490|ref|XP_003276362.1| PREDICTED: guanine nucleotide-binding protein-like 3-like protein [Nomascus leucogenys] Length = 581 Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGY-KEFI-LADIPGIIK 218 +G++GLPN GKS+ + S+ R++ + P T + ++E Y +FI L D PGI+ Sbjct: 254 VGVVGLPNVGKSSLINSLKRSRACSVGAVPGITKF-----MQEVYLDKFIRLLDAPGIVP 308 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + G R H ++ L V+ +E +Q +C L+E+S Y Sbjct: 309 GPNSEVGTILRNCVHVQK---LADPVTPVETILQ---RCNLEEISNY 349 >gi|304398581|ref|ZP_07380453.1| ribosome-associated GTPase EngA [Pantoea sp. aB] gi|304353792|gb|EFM18167.1| ribosome-associated GTPase EngA [Pantoea sp. aB] Length = 496 Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 10/133 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G + +EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L +V A + AA Q I L + R+K Sbjct: 60 IDGTEEGVETRMAEQSLLAIEEADVVLFMVDA-RAGMMAADQQIAKHLRS-----RQKAT 113 Query: 275 IVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 114 FLVANKTDGMDPD 126 >gi|295689384|ref|YP_003593077.1| GTP-binding proten HflX [Caulobacter segnis ATCC 21756] gi|295431287|gb|ADG10459.1| GTP-binding proten HflX [Caulobacter segnis ATCC 21756] Length = 446 Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 10/163 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L VK + I++D G I + Sbjct: 216 VALVGYTNAGKSTLFNRLTEAEVLAKDMLFATLDPTLRTVKLPDGRPAIMSDTVGFISDL 275 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 H+ L+ + V+LH+ V+ + QA + +L EL + +E+ Sbjct: 276 PHELVEAFRATLEEVQEADVVLHVRDVANPDSEAQARDVETVLSELGVTLDGGKTVVEV- 334 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 ++ID + D + + A + G P S++TG G +L Sbjct: 335 -WNKIDLLSEDDREIIEGQ-ARRVGASP--VSAVTGEGCEALL 373 >gi|261749630|ref|YP_003257316.1| putative cell growth GTP-binding protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497723|gb|ACX84173.1| putative GTP-binding protein (cell growth-related) [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 305 Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 3/104 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPG-IIKN 219 + IIG PN GKST + S+ I + P TT + LGIV + + I +D PG +IK Sbjct: 13 VNIIGFPNVGKSTLMNSLVGEDLSIITHKPQTTRHRILGIVDKYNAQIIFSDTPGFMIKT 72 Query: 220 AHQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQAAYQCILDEL 262 A I ++++ + E ++L + ++ Y IL+ L Sbjct: 73 AFFMQRIMMKYIERSLEDADIVLFTTEIGKFSISDKYFSILNSL 116 >gi|254294018|ref|YP_003060041.1| GTP-binding proten HflX [Hirschia baltica ATCC 49814] gi|254042549|gb|ACT59344.1| GTP-binding proten HflX [Hirschia baltica ATCC 49814] Length = 445 Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 14/182 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNA 220 + + G NAGKST S+T + AD PF TL P V+ K+ + D G I + Sbjct: 208 VALAGYTNAGKSTLFNSLTHSSVFAADMPFATLDPTARDVELSSGKKISMIDTVGFITDL 267 Query: 221 HQGAGIGDRFLKHTE---RTHVLLHI--VSALEENVQAA-YQCILDELSA-YNSELRKKI 273 + + F E +LLH+ +S E + Q++ +L +L N++ I Sbjct: 268 --PTHLIESFRATIEEAIEADLLLHVRDISHPETDRQSSDVNDVLTKLEQDLNADRPPVI 325 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 E+ S D + D L K + + + S+ TG G+ +++ + DK+F+ E Sbjct: 326 EVWNKS--DALSDDVLTALKTTVENR-DDIALT-SATTGEGLDDLMQMVQDKLFASTREF 381 Query: 334 EF 335 E Sbjct: 382 EL 383 >gi|166154589|ref|YP_001654707.1| putative nucleotide-binding protein [Chlamydia trachomatis 434/Bu] gi|166155464|ref|YP_001653719.1| putative nucleotide-binding protein [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335856|ref|ZP_07224100.1| putative nucleotide-binding protein [Chlamydia trachomatis L2tet1] gi|165930577|emb|CAP04074.1| putative nucleotide-binding protein [Chlamydia trachomatis 434/Bu] gi|165931452|emb|CAP07028.1| putative nucleotide-binding protein [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 447 Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 16/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I +IG N+GKST L +T A + F TL P V + +L D G I Sbjct: 226 IPTFALIGYTNSGKSTLLNLLTSADTYAENKLFATLDPKTRRCVLPCGQRVLLTDTVGFI 285 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 + H L+ + +LLH+V A E+V+ + IL EL ++ Sbjct: 286 RKLPHTLVAAFKSTLEAALQEDILLHVVDASHPLALEHVETT-KAILQELGITQPQV--- 341 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I L+++D V A + ++ P S+ TG GI ++L + D + Sbjct: 342 --ITVLNKMDKVADGVTASRLRLMSPN----PVCVSAKTGEGIRELLRSMEDMV 389 >gi|21220998|ref|NP_626777.1| GTP-binding protein Era [Streptomyces coelicolor A3(2)] gi|256787839|ref|ZP_05526270.1| GTP-binding protein Era [Streptomyces lividans TK24] gi|289771724|ref|ZP_06531102.1| GTP-binding protein Era [Streptomyces lividans TK24] gi|6714753|emb|CAB66217.1| Era-like GTP-binding protein [Streptomyces coelicolor A3(2)] gi|289701923|gb|EFD69352.1| GTP-binding protein Era [Streptomyces lividans TK24] Length = 320 Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 11/132 (8%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I ++ P TT + GIV + IL D PG+ K Sbjct: 27 VGRPNAGKSTLTNALVGQKVAITSNRPQTTRHTVRGIVHREDAQLILVDTPGLHKPR--- 83 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ E + + I EL+ +RK ++ +++ Sbjct: 84 TLLGERLNDVVRTTWAEVDVIGFCLPANEKLGPGDRFIAKELAG----IRKTPKVAIVTK 139 Query: 281 IDTVDSDTLARK 292 D VDS TLA + Sbjct: 140 TDLVDSKTLAEQ 151 >gi|313884686|ref|ZP_07818442.1| GTP-binding protein HflX [Eremococcus coleocola ACS-139-V-Col8] gi|312620054|gb|EFR31487.1| GTP-binding protein HflX [Eremococcus coleocola ACS-139-V-Col8] Length = 409 Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP-NLGIVKEGYKEFILADIPGIIKN 219 ++G++G NAGKST L+ +T + I D F TL P + G F + D G I++ Sbjct: 205 NLGLVGYTNAGKSTLLSQLTETETFIKDQVFATLDPLTRKLSLHGNDRFTITDTVGFIED 264 Query: 220 AHQGAGIG-DRFLKHTERTHVLLHIV 244 Q L+ +LLH+V Sbjct: 265 LPQELVQSFKSTLEEIRDVDLLLHVV 290 >gi|116283289|gb|AAH03603.1| GNL3L protein [Homo sapiens] Length = 575 Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGY-KEFI-LADIPGIIK 218 +G++GLPN GKS+ + S+ R++ + P T + ++E Y +FI L D PGI+ Sbjct: 255 VGVVGLPNVGKSSLINSLKRSRACSVGAVPGITKF-----MQEVYLDKFIRLLDAPGIVP 309 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + G R H ++ L V+ +E +Q +C L+E+S Y Sbjct: 310 GPNSEVGTILRNCVHVQK---LADPVTPVETILQ---RCNLEEISNY 350 >gi|116748319|ref|YP_845006.1| GTP-binding protein Era [Syntrophobacter fumaroxidans MPOB] gi|116697383|gb|ABK16571.1| GTP-binding protein Era [Syntrophobacter fumaroxidans MPOB] Length = 307 Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 17/123 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PN GKST L R K I A P TT LGI+ E + + D PGI Sbjct: 14 VALIGAPNVGKSTLLNRFLREKISITAPKPQTTRNRILGILTEPGFQIVFMDTPGI---- 69 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H+ DRF VL+ +AL +A C L E+ + E+ I + L + Sbjct: 70 HRAK---DRF------NRVLVD--TALATLGEADAVCFLIEIPEPDPEINDYI-LENLGR 117 Query: 281 IDT 283 IDT Sbjct: 118 IDT 120 >gi|119774018|ref|YP_926758.1| GTP-binding protein Era [Shewanella amazonensis SB2B] gi|119766518|gb|ABL99088.1| GTP-binding protein Era [Shewanella amazonensis SB2B] Length = 332 Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + + K I P TT + +GI EG + + D PG+ Sbjct: 41 VAIVGRPNVGKSTLLNKLLKQKISITSRKPQTTRHRIMGIHTEGPNQIVFIDTPGL 96 >gi|307353076|ref|YP_003894127.1| small GTP-binding protein [Methanoplanus petrolearius DSM 11571] gi|307156309|gb|ADN35689.1| small GTP-binding protein [Methanoplanus petrolearius DSM 11571] Length = 371 Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Query: 164 IIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 ++G P+ GKST L +T + A Y FTTL G ++ + DIPG+I A Sbjct: 68 LVGFPSVGKSTLLNKLTGNTDSETASYAFTTLTVVPGAMEHKGANIQILDIPGLIAGAAM 127 Query: 223 GAGIGDRFL 231 G G G + Sbjct: 128 GKGRGKEVI 136 >gi|94986202|ref|YP_605566.1| GTP-binding protein EngA [Deinococcus geothermalis DSM 11300] gi|166198711|sp|Q1IWI7|DER_DEIGD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|94556483|gb|ABF46397.1| Small GTP-binding protein domain [Deinococcus geothermalis DSM 11300] Length = 441 Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I +IG PN GKS+ L ++T+++ I AD P TT G + F+L D GI K Sbjct: 175 ISLIGRPNVGKSSLLNAITQSERAIVADQPGTTRDSLDVEWNYGGQRFVLVDTAGIRKKP 234 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 I + ++ + ER+ ++ +V+A E ++ L L AY+S K IV Sbjct: 235 --DTAIEEYAIQRSEAAIERSDIIWLVVNATE---IGDHELKLANL-AYDS---GKPVIV 285 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQIL 319 +++ D V + L + + EL + + + S+I +GI +L Sbjct: 286 VVNKWDLVPDEALKQTEKELNQKLHHIAYAPRVYTSAINDYGIHDML 332 >gi|330502446|ref|YP_004379315.1| GTP-binding protein Era [Pseudomonas mendocina NK-01] gi|328916732|gb|AEB57563.1| GTP-binding protein Era [Pseudomonas mendocina NK-01] Length = 299 Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 + I+G PN GKST L + K I P TT + LGI EG + + D PG+ K+ Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGEVQAVYVDTPGLHKH 70 >gi|260575069|ref|ZP_05843070.1| GTP-binding proten HflX [Rhodobacter sp. SW2] gi|259022691|gb|EEW25986.1| GTP-binding proten HflX [Rhodobacter sp. SW2] Length = 412 Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 17/169 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P + G+V ++ I++D G I + Sbjct: 194 VALVGYTNAGKSTLFNRMTGAEVLAKDMLFATLDPTMRGLVLPSGRKIIISDTVGFISDL 253 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 Q L+ ++LH+ +S E QAA IL L + +IEI Sbjct: 254 PTQLVAAFRATLEEVLEADLILHVRDISHPESAEQAADVAKILAALGVKAAT--PQIEI- 310 Query: 277 GLSQIDTVD---SDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 +++D V D L ++ Q S++TG G+P++LE + Sbjct: 311 -WNKLDLVQGAMRDGLVQQ-----AQGRDGVMALSALTGEGLPELLEAI 353 >gi|237742515|ref|ZP_04572996.1| GTP binding protein [Fusobacterium sp. 4_1_13] gi|229430163|gb|EEO40375.1| GTP binding protein [Fusobacterium sp. 4_1_13] Length = 298 Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 10/166 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST + + K I T N+ GI+ ++I D PGI K Sbjct: 6 IAVVGRPNVGKSTLINKLVSEKVAIVSDKAGTTRDNIKGILNFKDNQYIFIDTPGIHKPQ 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H G + + +K + ++L ++ A + + ++D + N +KK +I+ ++ Sbjct: 66 HLLGEYMTNIAVKILKDVDIILFLIDA-SKPIGTGDMFVMDRI---NENAKKKPKILLVN 121 Query: 280 QIDTVDSDTLARKKNELATQCGQ---VPFEFSSITGHGIPQILECL 322 ++D + + K E+ + G+ + F S + GI Q+LE L Sbjct: 122 KVDLISDEQKEEKLKEIKEKLGEFNKIIF-VSGMYSFGISQLLEAL 166 >gi|16125990|ref|NP_420554.1| GTP-binding protein HflX [Caulobacter crescentus CB15] gi|13423166|gb|AAK23722.1| GTP-binding protein HflX [Caulobacter crescentus CB15] Length = 427 Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 18/167 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L VK + I++D G I + Sbjct: 197 VALVGYTNAGKSTLFNRLTEAEVLAKDMLFATLDPTLRTVKLPDGRPAIMSDTVGFISDL 256 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 H+ L+ + V+LH+ V+ + QA + +L EL E + +E+ Sbjct: 257 PHELVEAFRATLEEVQEADVVLHVRDVANPDSEAQARDVETVLAELGVTLDEGKTVVEVW 316 Query: 277 G----LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 LS+ D + AR+ + A S++TG G +L Sbjct: 317 NKVDLLSEDDREIVEGQARRNDASA---------VSAVTGEGCEALL 354 >gi|308187766|ref|YP_003931897.1| GTP-binding protein engA [Pantoea vagans C9-1] gi|308058276|gb|ADO10448.1| GTP-binding protein engA [Pantoea vagans C9-1] Length = 496 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 10/133 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G + +EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L +V A + AA Q I L + R+K Sbjct: 60 IDGTEEGVETRMAEQSLLAIEEADVVLFMVDA-RAGMMAADQQIAKHLRS-----RQKAT 113 Query: 275 IVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 114 FLVANKTDGLDPD 126 >gi|269859304|ref|XP_002649377.1| GTPase, predicted [Enterocytozoon bieneusi H348] gi|220067140|gb|EED44607.1| GTPase, predicted [Enterocytozoon bieneusi H348] Length = 522 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 31/56 (55%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + I G PN GKST+L +++ K ++ Y FTT +G V+ + D PGI+ Sbjct: 170 VIIAGFPNVGKSTYLKTISACKTEVQPYAFTTRSLYVGHVEHDNLIYQFIDTPGIL 225 >gi|251796625|ref|YP_003011356.1| GTP-binding proten HflX [Paenibacillus sp. JDR-2] gi|247544251|gb|ACT01270.1| GTP-binding proten HflX [Paenibacillus sp. JDR-2] Length = 429 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 5/111 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + + ++G NAGKST L +T A + + F TL P ++ +E +L D G I Sbjct: 207 VIQVALVGYTNAGKSTLLRELTSADVYVENQLFATLDPTSRTLELPNGREVVLTDTVGFI 266 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIV---SALEENVQAAYQCILDELSA 264 +N H L+ ++LH+V S + E + IL +L A Sbjct: 267 QNLPHDLVAAFRATLEEVLEADLVLHVVDGSSPMREEQMRVVEQILGDLGA 317 >gi|116626742|ref|YP_828898.1| GTP-binding protein Era [Candidatus Solibacter usitatus Ellin6076] gi|116229904|gb|ABJ88613.1| GTP-binding protein Era [Candidatus Solibacter usitatus Ellin6076] Length = 304 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 15/115 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST L ++ K I AD P TT G++ + + AD PGI Sbjct: 10 VSLIGRPNAGKSTLLNALVGQKVAIVADKPQTTRTSIQGVLTLPEAQIVFADTPGI---- 65 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 H+ ++ L T R ALEE + + D +N + R+ I+I Sbjct: 66 HKADTPLNKRLMDTVR--------GALEERDLLLF--VADATRKFNEDDRRAIDI 110 >gi|259507801|ref|ZP_05750701.1| GTP-binding protein Era [Corynebacterium efficiens YS-314] gi|259164594|gb|EEW49148.1| GTP-binding protein Era [Corynebacterium efficiens YS-314] Length = 305 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 35/161 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI---- 216 + +G PN GKST ++ K I AD P TT +P G+V + I+ D PG+ Sbjct: 15 VSFVGRPNTGKSTLTNALVGEKIAITADQPETTRHPIRGLVHREDAQIIVVDTPGLHRPR 74 Query: 217 ----------IKNAHQGA-------------GIGDRFLKHTERTHV----LLHIVSALEE 249 +K+ + G GDR++ RT ++ IV+ ++ Sbjct: 75 TLLGERLNESVKDTYSDVDLIGLTIPATDKIGPGDRWILDAVRTAAPKTPIVGIVTKID- 133 Query: 250 NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLA 290 +A++ + +L A + L + E+V +S + DTLA Sbjct: 134 --KASWDQVAAQLMAVHELLGGESEVVPVSSASGENIDTLA 172 >gi|126434737|ref|YP_001070428.1| GTP-binding protein, HSR1-related [Mycobacterium sp. JLS] gi|126234537|gb|ABN97937.1| GTP-binding protein, HSR1-related protein [Mycobacterium sp. JLS] Length = 483 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 15/167 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I+G NAGKS+ L ++T A + + F TL P G +G + F+L D G Sbjct: 259 VPSVAIVGYTNAGKSSLLNALTGAGVLVENALFATLEPTTRRGEFDDG-RPFVLTDTVGF 317 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK- 272 ++ H + + F L+ +L+H+V + N A + + ++ +E K Sbjct: 318 VR--HLPTQLVEAFRSTLEEVADADLLVHVVDGSDANPLAQISAVREVINEVIAEQNAKP 375 Query: 273 -IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 E++ +++ID D +LA + L + F S+ TG G+ ++ Sbjct: 376 APELLVVNKIDAADGLSLAHLRRALP----EAVF-VSARTGQGLDRL 417 >gi|260221255|emb|CBA29636.1| GTP-binding protein engA [Curvibacter putative symbiont of Hydra magnipapillata] Length = 445 Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 3/76 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST +T+ + I ADY T + G K G +EFI+ D G +A Sbjct: 5 IALVGRPNVGKSTLFNRLTKTRDAIVADYAGLTRDRHYGNGKHGKQEFIVIDTGGFEPDA 64 Query: 221 HQGAGIGDRFLKHTER 236 G+GI K T + Sbjct: 65 --GSGIFKEMAKQTRQ 78 >gi|229588602|ref|YP_002870721.1| GTP-binding protein Era [Pseudomonas fluorescens SBW25] gi|229360468|emb|CAY47325.1| GTP-binding protein [Pseudomonas fluorescens SBW25] Length = 302 Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + + D PG+ K Sbjct: 14 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGTVQAVYVDTPGMHKGG 73 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 74 EKAL---NRYMNKT 84 >gi|323486669|ref|ZP_08091990.1| hypothetical protein HMPREF9474_03741 [Clostridium symbiosum WAL-14163] gi|323400050|gb|EGA92427.1| hypothetical protein HMPREF9474_03741 [Clostridium symbiosum WAL-14163] Length = 418 Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 10/163 (6%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA- 220 I+G NAGKST L +T A D F TL P G+ ++ +L D G I+ Sbjct: 205 AIVGYTNAGKSTLLNKLTGAGILAEDKLFATLDPTTRGMELPSGQKILLTDTVGFIRKLP 264 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H L+ + ++LH+V + + + + + L E++ K + ++ Sbjct: 265 HHLIEAFRSTLEEARYSDIILHVVDCVSPQMDSQIHIVYETLRKL--EIKDKTIVTVFNK 322 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 ID ++ + + L + S+ TG G+ ++ E L Sbjct: 323 IDCLEQEVI------LKDLQSDYQVKISARTGEGLEELTEILE 359 >gi|229544089|ref|ZP_04433148.1| ferrous iron transport protein B [Bacillus coagulans 36D1] gi|229325228|gb|EEN90904.1| ferrous iron transport protein B [Bacillus coagulans 36D1] Length = 664 Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 17/168 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + + G PN GK++ +T + + ++ T+ +G +KE +L D+PGI + Sbjct: 3 VALFGNPNTGKTSLFNELTGSYEYVGNWTGVTVEKKVGQLKENAG--VLIDLPGIYALNP 60 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + + RFL + T V L+IV A L N+ Q + E K + ++G Sbjct: 61 LSKDEAVASRFLIEEDFTSV-LNIVDASQLARNLHLTIQLM---------EYGKPV-LIG 109 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDK 325 L+ ID S + LA G + TG G I E + +K Sbjct: 110 LNMIDVAKSRGMKVNDRSLAEALGIPVVPIIARTGKGCKAISEQMQEK 157 >gi|167391018|ref|XP_001739604.1| nucleolar GTP-binding protein [Entamoeba dispar SAW760] gi|165896680|gb|EDR24027.1| nucleolar GTP-binding protein, putative [Entamoeba dispar SAW760] Length = 656 Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 28/54 (51%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + G PN GKS+ + +T A YPFTT +G Y ++ + D PGI+ Sbjct: 173 LAGFPNVGKSSLMNVITNANVDTQPYPFTTKSLFIGHTDFNYTQWQVIDTPGIL 226 >gi|167035366|ref|YP_001670597.1| GTP-binding protein Era [Pseudomonas putida GB-1] gi|189037661|sp|B0KV26|ERA_PSEPG RecName: Full=GTPase Era gi|166861854|gb|ABZ00262.1| GTP-binding protein Era [Pseudomonas putida GB-1] Length = 300 Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ K Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGDVQAIYVDTPGMHK 69 >gi|90021887|ref|YP_527714.1| GTP-binding protein Era [Saccharophagus degradans 2-40] gi|89951487|gb|ABD81502.1| GTP-binding protein Era [Saccharophagus degradans 2-40] Length = 298 Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L V K I P TT +GI EG + + D PGI Sbjct: 11 IAIVGRPNVGKSTLLNHVLEQKISITSRKPQTTRNNVVGIKTEGGVQMVFVDTPGI 66 >gi|199582284|gb|ACH89813.1| putative GDP binding protein [Alpheus colombiensis] gi|199582286|gb|ACH89814.1| putative GDP binding protein [Alpheus colombiensis] gi|199582288|gb|ACH89815.1| putative GDP binding protein [Alpheus colombiensis] gi|199582290|gb|ACH89816.1| putative GDP binding protein [Alpheus colombiensis] gi|199582292|gb|ACH89817.1| putative GDP binding protein [Alpheus colombiensis] gi|199582294|gb|ACH89818.1| putative GDP binding protein [Alpheus colombiensis] gi|199582296|gb|ACH89819.1| putative GDP binding protein [Alpheus colombiensis] gi|199582298|gb|ACH89820.1| putative GDP binding protein [Alpheus estuariensis] gi|199582302|gb|ACH89822.1| putative GDP binding protein [Alpheus estuariensis] gi|199582304|gb|ACH89823.1| putative GDP binding protein [Alpheus estuariensis] Length = 218 Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + + H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDAIFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE--------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 DEL + E L K +E G ++ + DT+ R KN L + V F Sbjct: 63 DELRLKDIEYINNVWDKLYKLVERGGDKKLKP-EYDTICRVKNLLEEEKRHVRF 115 >gi|296133911|ref|YP_003641158.1| GTP-binding protein Era [Thermincola sp. JR] gi|296032489|gb|ADG83257.1| GTP-binding protein Era [Thermincola potens JR] Length = 300 Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 22/171 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PN GKST + K I ++ P TT G++ + I D PGI K Sbjct: 10 VALIGRPNVGKSTLMNKFLGQKLAIMSEKPQTTRNKINGVLTGENYQVIFLDTPGIHKPK 69 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H+ G + + ++L +V A E+ V + IL++L + + I+ ++ Sbjct: 70 HKLGEYMVQVAYNALKEVDLILFLVEATEQEVGTGDRYILEQLQEIKTPV-----ILVIN 124 Query: 280 QIDTVDSDTL--------ARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 +ID V D + ARK Q +V S+ITG + +L+ + Sbjct: 125 KIDLVQKDAILPVIDAYTARK------QFAEV-VPVSAITGANLQALLDNI 168 >gi|294815506|ref|ZP_06774149.1| ATP/GTP-binding protein [Streptomyces clavuligerus ATCC 27064] gi|326443857|ref|ZP_08218591.1| ATP/GTP-binding protein [Streptomyces clavuligerus ATCC 27064] gi|294328105|gb|EFG09748.1| ATP/GTP-binding protein [Streptomyces clavuligerus ATCC 27064] Length = 496 Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 17/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I G NAGKS+ L +T A + + F TL P + + + + LAD G + Sbjct: 274 VPSVAIAGYTNAGKSSLLNRLTGAGVLVENALFATLDPTVRRAETPSGRLYTLADTVGFV 333 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVS----ALEENVQAAYQCILDELSAYNSELRKK 272 ++ H ++ + ++LH+V A EE + A + I D + A + Sbjct: 334 RHLPHHLVEAFRSTMEEVGESDLILHVVDGSHPAPEEQLAAVREVIRD-VGAVDVP---- 388 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EIV +++ D D L R + + S+ TG GI ++L + D++ Sbjct: 389 -EIVVVNKADAADPLVLQR-----LMRVERHSIAVSARTGEGIEELLRLIDDEL 436 >gi|294950001|ref|XP_002786411.1| GTPase, putative [Perkinsus marinus ATCC 50983] gi|239900703|gb|EER18207.1| GTPase, putative [Perkinsus marinus ATCC 50983] Length = 630 Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 11/139 (7%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 + G PN GKS+F+ VT A + Y FTT +G + Y + + D PGI+ + Sbjct: 171 MTGYPNVGKSSFMNIVTDANVDVQPYAFTTKSIFVGHMDYKYTRWQVLDTPGILDHP--- 227 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNS---ELRKKIEIVG 277 + +R L HI + + V + QC I ++S ++S + K +V Sbjct: 228 --LEERNTIEMTAITALAHIPATVLYFVDVSEQCGFTIEQQVSLFHSIKPLFKSKPLLVV 285 Query: 278 LSQIDTVDSDTLARKKNEL 296 L++ D + L+ ++ +L Sbjct: 286 LNKTDVKPLEELSEEQKKL 304 >gi|126739722|ref|ZP_01755414.1| GTP-binding protein Era [Roseobacter sp. SK209-2-6] gi|126719368|gb|EBA16078.1| GTP-binding protein Era [Roseobacter sp. SK209-2-6] Length = 301 Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 + +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARVRGVAMEGDSQIVFVDTPGLFQ 65 >gi|56695595|ref|YP_165946.1| GTP-binding protein Era [Ruegeria pomeroyi DSS-3] gi|56677332|gb|AAV93998.1| GTP-binding protein Era [Ruegeria pomeroyi DSS-3] Length = 301 Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 + +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRTRIRGVAMEGEAQIVFVDTPGLFQ 65 >gi|219850626|ref|YP_002465059.1| GTP-binding protein Era [Chloroflexus aggregans DSM 9485] gi|219544885|gb|ACL26623.1| GTP-binding protein Era [Chloroflexus aggregans DSM 9485] Length = 468 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 4/77 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST L ++ K I + P TT P GI+ ++ I D PGI + Sbjct: 178 VALVGKPNVGKSTLLNALLGEKVAIVSPRPQTTRVPVRGILSRPGEQIIFIDTPGIHEPN 237 Query: 221 HQGAGIGDRFLKHTERT 237 H+ +G ++ ERT Sbjct: 238 HR---LGKLMVELAERT 251 >gi|26988167|ref|NP_743592.1| GTP-binding protein Era [Pseudomonas putida KT2440] gi|38257318|sp|Q88MY4|ERA_PSEPK RecName: Full=GTPase Era gi|24982901|gb|AAN67056.1|AE016334_5 GTP-binding protein Era [Pseudomonas putida KT2440] Length = 302 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ K Sbjct: 14 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGDVQAIYVDTPGMHK 71 >gi|2127948|pir||G64475 GTP-binding protein, GTP1/OBG-family - Methanococcus jannaschii Length = 354 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 4/56 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + I G PN GKST L +T A +I YPFTT N+G + E + D PG++ Sbjct: 177 VVIAGYPNVGKSTLLKKLTGADVEINSYPFTTKGINVGYI----GEIQMVDTPGLL 228 >gi|148549493|ref|YP_001269595.1| GTP-binding protein Era [Pseudomonas putida F1] gi|325275443|ref|ZP_08141374.1| GTPase Era [Pseudomonas sp. TJI-51] gi|189037660|sp|A5W8F1|ERA_PSEP1 RecName: Full=GTPase Era gi|148513551|gb|ABQ80411.1| GTP-binding protein Era [Pseudomonas putida F1] gi|313500338|gb|ADR61704.1| Era [Pseudomonas putida BIRD-1] gi|324099419|gb|EGB97334.1| GTPase Era [Pseudomonas sp. TJI-51] Length = 300 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ K Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGDVQAIYVDTPGMHK 69 >gi|325262144|ref|ZP_08128882.1| ferrous iron transport protein B [Clostridium sp. D5] gi|324033598|gb|EGB94875.1| ferrous iron transport protein B [Clostridium sp. D5] Length = 727 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K G K+ I+ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLK-GNKDVIIMDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ +L+IV + +E N+ + Q + EL + ++ + Sbjct: 64 YTLEEVVARNYLINEKPDAILNIVDGTNIERNLYLSTQLM---------ELGIPV-VMAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V+ ++L+ + G E S++ G+G+ Q E Sbjct: 114 NMMDVVEKSGDKIHIDKLSKKLGCEVVEISALKGNGVTQAAE 155 >gi|306836304|ref|ZP_07469285.1| GTP-binding protein HflX [Corynebacterium accolens ATCC 49726] gi|304567824|gb|EFM43408.1| GTP-binding protein HflX [Corynebacterium accolens ATCC 49726] Length = 502 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 17/169 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 IA I I G NAGKS+ + ++T A + D F TL P + +G ++ + D G Sbjct: 273 IAQIAIAGYTNAGKSSLINAMTNAGVLVEDALFATLDPTTRRASLADG-RQVVFTDTVGF 331 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSEL 269 ++ H + + F L+ ++LH+V + + ++A + I D +S + Sbjct: 332 VR--HLPTQLVEAFKSTLEEVLAADIMLHVVDGSDPFPLKQIEAVNKVIYDIVSETGEQ- 388 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 EI+ +++ID D LA ++ L + V + S+ TG GI ++ Sbjct: 389 -APPEIIVINKIDQADPLVLAELRHVLDHE--DVVY-VSARTGEGIDEL 433 >gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 1188 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 17/125 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFIL--------ADI 213 I ++G NAGKST ++++T+ + F TL P L +F+L +D+ Sbjct: 916 IAVVGYTNAGKSTLISALTKTALYCNERLFATLDPTLKSAHLPSGKFVLLSDTVGFISDL 975 Query: 214 PGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNSELR 270 P + A Q L+ +LLH+V + N++ IL ++ +L+ Sbjct: 976 PIQLVKAFQST------LEEVVEADILLHVVDSTAPNIEEHRSTVFHILKQIGVSEEKLQ 1029 Query: 271 KKIEI 275 IE+ Sbjct: 1030 NMIEV 1034 >gi|293611451|ref|ZP_06693746.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826235|gb|EFF84605.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 447 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 2/90 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST + + AD F TL P L + +G +LAD G + Sbjct: 199 IPTISLVGYTNAGKSTLFNILANSDVYAADQLFATLDPTLRRLDWDGIGTVVLADTVGFV 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA 246 +N H L+ T +LLH++ + Sbjct: 259 RNLQHDLVESFKATLEETLEATLLLHVIDS 288 >gi|78357711|ref|YP_389160.1| ferrous iron transport protein B [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220116|gb|ABB39465.1| ferrous iron transport protein B [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 725 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 3/103 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I I + G PN+GK+T ++T A+ + +YP T+ G V+ +E + D+PG Sbjct: 3 ITTIALAGNPNSGKTTAFNALTGARQHVGNYPGITVDKKEGRVRLDGREVHIIDLPGTYS 62 Query: 219 -NAHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCI 258 A+ + R ER V++ ++ +ALE N+ A Q + Sbjct: 63 LTAYTQEELVARSYVVDERPDVVVDVLNSAALERNLYLAVQFL 105 >gi|323692185|ref|ZP_08106428.1| GTP-binding protein HflX [Clostridium symbiosum WAL-14673] gi|323503759|gb|EGB19578.1| GTP-binding protein HflX [Clostridium symbiosum WAL-14673] Length = 418 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 10/163 (6%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA- 220 I+G NAGKST L +T A D F TL P G+ ++ +L D G I+ Sbjct: 205 AIVGYTNAGKSTLLNKLTGAGILAEDKLFATLDPTTRGMELPSGQKILLTDTVGFIRKLP 264 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H L+ + ++LH+V + + + + + L E++ K + ++ Sbjct: 265 HHLIEAFRSTLEEARYSDIILHVVDCVSPQMDSQIHIVYETLRKL--EIKDKTIVTVFNK 322 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 ID ++ + + L + S+ TG G+ ++ E L Sbjct: 323 IDCLEQEVI------LKDLQSDYQVKISARTGEGLEELTEILE 359 >gi|302871642|ref|YP_003840278.1| small GTP-binding protein [Caldicellulosiruptor obsidiansis OB47] gi|302574501|gb|ADL42292.1| small GTP-binding protein [Caldicellulosiruptor obsidiansis OB47] Length = 607 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 4/55 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 I ++G PN GKS +T ++++YP TT+ N G YK++++ D PG+ Sbjct: 19 IALVGNPNVGKSVIFNKLTGRYVEVSNYPSTTVDVNYGF----YKDYVIVDTPGV 69 >gi|297571540|ref|YP_003697314.1| GTP-binding protein Era [Arcanobacterium haemolyticum DSM 20595] gi|296931887|gb|ADH92695.1| GTP-binding protein Era [Arcanobacterium haemolyticum DSM 20595] Length = 310 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PNAGKST ++ K I A+ P TT GIV+ + + IL D PG+ Sbjct: 18 ISIVGRPNAGKSTLTNALVGTKIVITANQPETTRRIVRGIVQRDHGQLILVDTPGL 73 >gi|260583275|ref|ZP_05851051.1| ribosome-associated GTPase EngA [Haemophilus influenzae NT127] gi|260093682|gb|EEW77594.1| ribosome-associated GTPase EngA [Haemophilus influenzae NT127] Length = 503 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHIAGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L + ++L +V A +A ++ Y + + KI +V Sbjct: 65 EEGVEEKMAEQSLLAIDEADIVLFLVDA-----RAGLTAADIGIANYLRQRQNKITVVVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G++ + ++ G G+ Q++E Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGEIE-QIAASQGRGVTQLME 158 >gi|115492037|ref|XP_001210646.1| hypothetical protein ATEG_00560 [Aspergillus terreus NIH2624] gi|114197506|gb|EAU39206.1| hypothetical protein ATEG_00560 [Aspergillus terreus NIH2624] Length = 413 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 196 PNLGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 PN G EG + L D+ G++ AHQG G+G++FL L+H+V Sbjct: 35 PNYGGCVEGRRSVPIELLDVAGLVPGAHQGRGLGNKFLDDLRHADALIHVV 85 >gi|110801866|ref|YP_699237.1| GTP binding protein [Clostridium perfringens SM101] gi|110682367|gb|ABG85737.1| GTP binding protein [Clostridium perfringens SM101] Length = 597 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 28/186 (15%) Query: 160 ADIGIIGLPNAGKSTFLASV---------TRAKPKI--ADYPFTTLYPNLGIVK-EGYKE 207 + + ++G NAGKST ++ T+AK K+ AD F TL +K ++ Sbjct: 364 SQVSLVGYTNAGKSTLRNTLCAESASTLATQAKDKVFEADMLFATLDTTTRAIKLPDNRD 423 Query: 208 FILADIPGII-KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELS 263 L D G + K H+ L+ + +L H+V A +N Q A + +L EL Sbjct: 424 ITLTDTVGFVSKLPHELVEAFKSTLEEVIYSDLLCHVVDASSDNAQEEIIAVEKVLGELK 483 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGH---GIPQILE 320 A S +I+ L++ID D + L NEL + + + I+ + +LE Sbjct: 484 ALES-----AKILVLNKIDKADEEKL----NELEAKYSSIYNKVVKISARERINLDNLLE 534 Query: 321 CLHDKI 326 + +++ Sbjct: 535 AISEEL 540 >gi|331235712|ref|XP_003330516.1| GTP-dependent nucleic acid-binding protein engD [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309309506|gb|EFP86097.1| GTP-dependent nucleic acid-binding protein engD [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 389 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 22/110 (20%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPF----TTLYPNLGIVKEGYKEF-------- 208 IGI+G+PN GKS+ + + K A++P+ T+ P V + F Sbjct: 23 IGIVGMPNVGKSSLFNVIAKCDLGKSANFPYCLISATIDPEEARVPVPDERFDWLCSVYK 82 Query: 209 ---------ILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+ A GAG+G+ FL H + +V A ++ Sbjct: 83 PTNKIPAFLTCIDIAGLTAGASTGAGLGNAFLSHVRAVDGIFQVVRAFDD 132 >gi|164686395|ref|ZP_02210425.1| hypothetical protein CLOBAR_02833 [Clostridium bartlettii DSM 16795] gi|164601997|gb|EDQ95462.1| hypothetical protein CLOBAR_02833 [Clostridium bartlettii DSM 16795] Length = 686 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 17/176 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T +T +K + ++P T+ G K+ KE + D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNDITGSKQHVGNWPGVTVEQKTGKYKKN-KEIEIVDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKI-EIVG 277 + I R E VL+ IV + +E N+ Q L KI ++ Sbjct: 64 YSAEEIVARDYIVDENPDVLIDIVDGTNIERNLYLTLQV-----------LETKIPTVIA 112 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 L+ +D V++ +L+ G + +G GI +++E KI S + E+ Sbjct: 113 LNMMDEVEASGTKIDVKKLSKILGVPVIPIVARSGKGINELMEAAQ-KIASSKVED 167 >gi|13959364|sp|Q9RDF2|ERA_STRCO RecName: Full=GTPase Era Length = 317 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 11/132 (8%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I ++ P TT + GIV + IL D PG+ K Sbjct: 24 VGRPNAGKSTLTNALVGQKVAITSNRPQTTRHTVRGIVHREDAQLILVDTPGLHKPR--- 80 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ E + + I EL+ +RK ++ +++ Sbjct: 81 TLLGERLNDVVRTTWAEVDVIGFCLPANEKLGPGDRFIAKELAG----IRKTPKVAIVTK 136 Query: 281 IDTVDSDTLARK 292 D VDS TLA + Sbjct: 137 TDLVDSKTLAEQ 148 >gi|306825398|ref|ZP_07458738.1| GTP-binding protein Era [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432336|gb|EFM35312.1| GTP-binding protein Era [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 299 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEPRGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLAQIDDFRNQMDFKEIVP--ISALQGNNVSRLIDILSENL 169 >gi|306829343|ref|ZP_07462533.1| GTP-binding protein Era [Streptococcus mitis ATCC 6249] gi|322374470|ref|ZP_08048984.1| GTP-binding protein Era [Streptococcus sp. C300] gi|304428429|gb|EFM31519.1| GTP-binding protein Era [Streptococcus mitis ATCC 6249] gi|321279970|gb|EFX57009.1| GTP-binding protein Era [Streptococcus sp. C300] Length = 299 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEPRGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLAQIDDFRNQMDFKEIVP--ISALQGNNVSRLIDILSENL 169 >gi|257464226|ref|ZP_05628605.1| GTP-binding protein Era [Fusobacterium sp. D12] gi|317061746|ref|ZP_07926231.1| GTP-binding protein era [Fusobacterium sp. D12] gi|313687422|gb|EFS24257.1| GTP-binding protein era [Fusobacterium sp. D12] Length = 296 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 8/143 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST + + K I T N+ GI+ K++I D PGI K Sbjct: 6 IAVVGRPNVGKSTLMNKLVAEKVAIVSDKAGTTRDNIKGILNVQGKQYIFIDTPGIHKPK 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H G + D ++ + +L ++ +E + + +++ E RK + +V ++ Sbjct: 66 HLLGEYMTDIAIRSFKDADAILFLLDGTQE-ISTGDFFVWEKI----KETRKPV-VVLVN 119 Query: 280 QIDTVDSDTLARKKNELATQCGQ 302 +ID + + KK E+ + G+ Sbjct: 120 KIDKISDLEIEEKKAEIVEKLGE 142 >gi|254780941|ref|YP_003065354.1| GTP-binding protein Era [Candidatus Liberibacter asiaticus str. psy62] gi|254040618|gb|ACT57414.1| GTP-binding protein Era [Candidatus Liberibacter asiaticus str. psy62] Length = 311 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 17/168 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGII--K 218 + ++G NAGKST + AK I + TT GIV E + + D PGI K Sbjct: 25 VALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKESQIVFLDTPGIFNAK 84 Query: 219 NAHQGAGIGDRF--LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +++ I + +KH + +++ L+ N+ +L E++ +S L I+ Sbjct: 85 DSYHKLMIRLSWSTIKHADIVCLVVDSHRELKVNIHD----LLKEIAKRSSRL-----IL 135 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQV--PFEFSSITGHGIPQILECL 322 L++ID V + L ++ E+A + + F S+ GHG +L L Sbjct: 136 ILNKIDCVKPERLL-EQAEIANKLVFIEKTFMVSATKGHGCDDVLNYL 182 >gi|254785338|ref|YP_003072767.1| GTP-binding protein Era [Teredinibacter turnerae T7901] gi|237686443|gb|ACR13707.1| GTP-binding protein Era [Teredinibacter turnerae T7901] Length = 296 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I+G PN GKST L + K I P TT LGI G + I D PGI Sbjct: 9 IAIVGRPNVGKSTLLNHLIEQKLAITSRKPQTTRNNMLGIKTVGDVQMIFVDTPGI---- 64 Query: 221 HQGAG 225 H+G G Sbjct: 65 HKGHG 69 >gi|332367331|gb|EGJ45066.1| GTP-binding protein Era [Streptococcus sanguinis SK1059] Length = 299 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVEAAYSTLREVDTVLFMVPA-DETRGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLAQIDDFRQQMDFKEIVP--ISALQGNNVSRLVDILSENL 169 >gi|309388447|gb|ADO76327.1| small GTP-binding protein [Halanaerobium praevalens DSM 2228] Length = 227 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 32/55 (58%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 ++ + G PN+GKST +T A+ IA+YP T+ G++K + L D+PG Sbjct: 5 NVAVAGQPNSGKSTMFNLLTGARQFIANYPGVTVEKKTGVLKIDSDKCNLIDLPG 59 >gi|307708604|ref|ZP_07645068.1| GTP-binding protein Era [Streptococcus mitis NCTC 12261] gi|307615353|gb|EFN94562.1| GTP-binding protein Era [Streptococcus mitis NCTC 12261] Length = 299 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEARGKGDDMIIERLKAAKIPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLSQIDDFRNQMDFKEIVP--ISALQGNNVSRLVDILSENL 169 >gi|226307218|ref|YP_002767178.1| GTP-binding protein Era [Rhodococcus erythropolis PR4] gi|226186335|dbj|BAH34439.1| probable GTP-binding protein Era [Rhodococcus erythropolis PR4] Length = 305 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 8/143 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 + +G PN GKST ++ +K I + P TT + GIV + + IL D PG+ K Sbjct: 11 VCFVGRPNTGKSTLTNALVGSKIAITSSRPQTTRHTIRGIVHREHAQLILVDTPGLHKPR 70 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 G + D V+ + A +E + + I+ ++ ++ K ++VG+ Sbjct: 71 TLLGQRLNDLVRDTYSEVDVICLCIPA-DEAIGPGDRWIVQQI----RQMAPKTKLVGIV 125 Query: 279 SQIDTVDSDTLARKKNELATQCG 301 ++ID V D + ++ L+T G Sbjct: 126 TKIDKVSRDAVGKQLLALSTVLG 148 >gi|221194745|ref|ZP_03567802.1| GTP-binding protein HflX [Atopobium rimae ATCC 49626] gi|221185649|gb|EEE18039.1| GTP-binding protein HflX [Atopobium rimae ATCC 49626] Length = 429 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 8/140 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I + + G NAGKST L +T A D F TL P I E ++ L D G I Sbjct: 209 IFSVSLAGYTNAGKSTLLNQLTNASVYAKDELFATLDPTTRTITLEEGRKITLTDTVGFI 268 Query: 218 KNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 + + + F L + ++L +V A ++N + + L+ KK+ Sbjct: 269 QKL--PTTLIESFKSTLAEAQAADLILLVVDASDKNFDKEIEVVTSILNDIKVSAHKKLL 326 Query: 275 IVGLSQIDTVDSDTLARKKN 294 + ++ID +D++ LA+ + Sbjct: 327 V--FNKIDLLDTNNLAKMRT 344 >gi|330507073|ref|YP_004383501.1| GTP-binding protein HflX [Methanosaeta concilii GP-6] gi|328927881|gb|AEB67683.1| GTP-binding protein HflX [Methanosaeta concilii GP-6] Length = 415 Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 31/180 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G NAGKST L ++T + D PFTTL P ++ + +L D G I + Sbjct: 190 IALAGYTNAGKSTLLNTLTGSVVNAQDQPFTTLSPTTRALEINGRRTMLTDTVGFIDD-- 247 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI-------- 273 L H ++ S L E QA ++ +LS LR+K+ Sbjct: 248 ---------LPH----FLIKAFQSTLSEIAQADLVLLVADLSDPLELLRRKLVASHKALW 294 Query: 274 -------EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I L+++D +D + AR + + P S+ + G + EC++ + Sbjct: 295 DCQVTAPMITVLNKMDRLD-EFDARMRFDQIKDLAPNPVMVSAHSSQGQESLKECIYQHL 353 >gi|220935213|ref|YP_002514112.1| GTP-binding protein EngA [Thioalkalivibrio sp. HL-EbGR7] gi|254783176|sp|B8GTN1|DER_THISH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|219996523|gb|ACL73125.1| GTP-binding protein EngA [Thioalkalivibrio sp. HL-EbGR7] Length = 464 Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 11/168 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR++ +AD+P T G + G +++ D G+ Sbjct: 1 MLPVIALVGRPNVGKSTLFNQLTRSRDALVADFPGLTRDRQYGPGRVGGFPYMVVDTGGL 60 Query: 217 IKNAHQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 A + R + + + V+L +V E + AA Q I L KK+ + Sbjct: 61 SGEAETLDNLMARQTQQAIDESDVVLFLVDG-REGLTAADQAIARSLRTQG----KKVLL 115 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 V +++ D VD+D + + L P ++ G G+ ++ +H Sbjct: 116 V-VNKTDGVDADQAMAEFHALGFGA---PIPIAATHGRGVLGLMNAVH 159 >gi|288958341|ref|YP_003448682.1| GTP-binding protein [Azospirillum sp. B510] gi|288910649|dbj|BAI72138.1| GTP-binding protein [Azospirillum sp. B510] Length = 426 Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 80/172 (46%), Gaps = 13/172 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + ++G NAGKST + A D F TL P + + ++ IL+D G I + Sbjct: 195 VALVGYTNAGKSTLFNRLANADVFAQDLLFATLDPTMRQVTLPSGRKVILSDTVGFISDL 254 Query: 221 HQGAGIGDR-FLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 G R L+ + ++LH+ ++ ++ Q A +L ++ + E+ ++ I Sbjct: 255 PHGLVAAFRATLEEVDAADIILHVRDIAHIDSEAQKADVHEVLSDM-GIDPEIDDRV-IE 312 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKI 326 L++ID +D ++ A + Q G+ P S+++G GI + L ++ Sbjct: 313 VLNKIDALDEESRA----AILVQTGRNPRAVAVSALSGEGIDDLDRLLDQRM 360 >gi|45358193|ref|NP_987750.1| ferrous iron transporter [Methanococcus maripaludis S2] gi|44920950|emb|CAF30186.1| ferrous iron transporter (GTP-binding) [Methanococcus maripaludis S2] Length = 647 Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 32/55 (58%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 I ++G PN GK+T +T K +I ++P T+ G K+ + +++ D+PGI Sbjct: 7 IALLGQPNVGKTTLFNHLTGMKQRIGNWPGVTVEKKEGFFKKNSESYVVVDLPGI 61 >gi|291460227|ref|ZP_06599617.1| ferrous iron transport protein B [Oribacterium sp. oral taxon 078 str. F0262] gi|291417174|gb|EFE90893.1| ferrous iron transport protein B [Oribacterium sp. oral taxon 078 str. F0262] Length = 739 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 20/165 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I + G PNAGK+T +T + + ++P T+ G +K G+ + +AD+PGI + Sbjct: 5 IALAGNPNAGKTTLFNQLTGSNQYVGNWPGVTVEKKEGKLK-GHSDVTIADLPGIYSLSP 63 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + +L +T R +L+IV + LE N+ + Q L EL ++ Sbjct: 64 YTLEEVVARNYLINT-RPDAILNIVDGTNLERNLYLSTQ--LKELGIP--------VVMA 112 Query: 278 LSQIDTVDS--DTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ +D V+ D + K+ E A C V S++ G G+ + E Sbjct: 113 INMMDVVEKSGDVINLKELEKAMGCKVV--SISALRGKGVKEAAE 155 >gi|256396187|ref|YP_003117751.1| GTP-binding proten HflX [Catenulispora acidiphila DSM 44928] gi|256362413|gb|ACU75910.1| GTP-binding proten HflX [Catenulispora acidiphila DSM 44928] Length = 502 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 19/171 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + + G NAGKS+ L +T A + + F TL P + + + + L+D G + Sbjct: 279 VPSVVLAGYTNAGKSSILNRLTGAGVLVENALFATLDPTVRRTETASGRAYTLSDTVGFV 338 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKI 273 ++ HQ L+ + ++LH+V A +E+ + +A + + ++ A + + Sbjct: 339 RHLPHQLVEAFRSTLEEVGESDLVLHVVDASDEDPEGQISAVRAVFADMGAGDVK----- 393 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF--SSITGHGIPQILECL 322 E++ L++ D D + LAR P S+ TG GI +L + Sbjct: 394 ELMVLNKADLADPEVLAR-------LLRHEPHSIIVSARTGEGIDHLLSAI 437 >gi|77457222|ref|YP_346727.1| GTP-binding protein Era [Pseudomonas fluorescens Pf0-1] gi|123605861|sp|Q3KHL8|ERA_PSEPF RecName: Full=GTPase Era gi|77381225|gb|ABA72738.1| GTP-binding protein [Pseudomonas fluorescens Pf0-1] Length = 300 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ K Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGDVQAIYVDTPGMHKGG 71 Query: 221 HQGAGIGDRFLKHT 234 + +R++ T Sbjct: 72 EKAL---NRYMNKT 82 >gi|296119858|ref|ZP_06838412.1| GTP-binding protein Era [Corynebacterium ammoniagenes DSM 20306] gi|295967012|gb|EFG80283.1| GTP-binding protein Era [Corynebacterium ammoniagenes DSM 20306] Length = 332 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 6/130 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +G PN GKST ++ K I AD P TT +P G+V + I+ D PG+ + Sbjct: 39 VSFVGRPNTGKSTLTNALVGEKIAITADQPETTRHPIRGLVHREDAQIIVVDTPGLHRPR 98 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL-S 279 + +K T + ++ + +E + + ILD + E+ K I+G+ + Sbjct: 99 TLLGERLNEIVKETYQDVDVIGLTIPADEKIGPGDRWILDNV----REIAPKTPIIGIVT 154 Query: 280 QIDTVDSDTL 289 ++D D + Sbjct: 155 KLDRASKDQV 164 >gi|126736284|ref|ZP_01752026.1| GTP-binding protein HflX [Roseobacter sp. CCS2] gi|126714105|gb|EBA10974.1| GTP-binding protein HflX [Roseobacter sp. CCS2] Length = 412 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 15/181 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + ++G NAGKST +T A+ D F TL P + IV E I++D G I + Sbjct: 194 VALVGYTNAGKSTLFNRLTGAQVFAKDMLFATLDPTMRKIVLPTGDEVIMSDTVGFISDL 253 Query: 221 HQGAGIGDR-FLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 R L+ +++H+ +S + QA IL L +E IE+ Sbjct: 254 PTELVAAFRATLEEVLDADLIVHVRDISHPQTEEQAEDVHAILQSLGV--AEEAPIIEV- 310 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECLHDKIFSIRGENE 334 ++ D ++ D ++ + TQ + F S+ITG G+ +L + DK+ R E Sbjct: 311 -WNKTDLLEGDA----RDAVLTQAARTDDLFAVSAITGEGMDPLLAAIPDKLKDPRSEEH 365 Query: 335 F 335 Sbjct: 366 L 366 >gi|68074087|ref|XP_678958.1| nucleolar GTP-binding protein 1 [Plasmodium berghei strain ANKA] gi|56499582|emb|CAH94267.1| nucleolar GTP-binding protein 1, putative [Plasmodium berghei] Length = 676 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 11/165 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN GKS+F+ V+RA ++ Y FTT +G + + D PG++ + Sbjct: 173 ILLSGAPNVGKSSFINYVSRANVEVQPYSFTTKSLYVGHFDYNLNRYQIIDTPGLLDRSL 232 Query: 222 QGAGIGDRFLKHTERTH---VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + T H V+L I+ EE + I + L + S K ++GL Sbjct: 233 ENRNTIE-MTTITALAHINGVILFIIDISEECGMTIKEQI-NLLYSIKSLFSNKSIVIGL 290 Query: 279 SQIDTVDSDTLARKKNELATQC-----GQVPF-EFSSITGHGIPQ 317 ++ID D ++ + L + V F FS++TG G+ + Sbjct: 291 NKIDKGSLDNVSIENKLLIKKIVDDIKKTVKFCSFSTLTGVGVEE 335 >gi|299143854|ref|ZP_07036934.1| GTP-binding protein HflX [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518339|gb|EFI42078.1| GTP-binding protein HflX [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 433 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 11/112 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPK---IADYPFTTLYPNLGIVK--EGYKEFILADI 213 I+ + ++G NAGKST L + + K + D F TL PN K G EFIL+D Sbjct: 208 ISTVSLVGYTNAGKSTILNRLKVSDSKDVYVEDMLFATLDPNSRRAKLPNGI-EFILSDT 266 Query: 214 PGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 G + + + + F L+ + + ++LH++ A ++++ Y+ ++ L Sbjct: 267 VGFV--SKLPTKLIEAFKSTLEEIKYSDLILHVIDASSDDLEIQYETTMNIL 316 >gi|261886326|ref|ZP_06010365.1| ferrous iron transport protein [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 703 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 19/167 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP-NLGIVKEGYK-EFILADIPGI--I 217 I ++G PN GKS FL++++++ PKI ++ T+ I+K+G FI D+PG+ + Sbjct: 7 IALVGQPNVGKSQFLSAISKSNPKIGNFAGVTVEKYEATIIKDGITLHFI--DLPGLYSM 64 Query: 218 KNAHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEI 275 + + + FL + + ++L++V + LE N+ L+A L KK+ + Sbjct: 65 DDFSKDESVAKDFLMKS-KYDMILNVVDSTNLESNL---------FLTAELMTLGKKM-V 113 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + L+ D S+ + L++ G + SS+ + +L+ + Sbjct: 114 IALNMDDEAKSEGIDINSEHLSSILGIPTIKVSSVKKTNLKTLLDII 160 >gi|303278266|ref|XP_003058426.1| predicted protein [Micromonas pusilla CCMP1545] gi|226459586|gb|EEH56881.1| predicted protein [Micromonas pusilla CCMP1545] Length = 322 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 9/73 (12%) Query: 162 IGIIGLPNAGKSTFL-----ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +GI+G+PNAGKS + V+ PK TT L + + + IL D+PG+ Sbjct: 8 VGIVGVPNAGKSQLTNTLAGSQVSAVSPKTN----TTRIETLATITKRETQVILVDLPGV 63 Query: 217 IKNAHQGAGIGDR 229 + H G+ ++ Sbjct: 64 VGREHYRNGVHEK 76 >gi|159037045|ref|YP_001536298.1| small GTP-binding protein [Salinispora arenicola CNS-205] gi|157915880|gb|ABV97307.1| small GTP-binding protein [Salinispora arenicola CNS-205] Length = 515 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 79/175 (45%), Gaps = 19/175 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I G NAGKS+ L +T A + + F TL P + ++G + F +D G Sbjct: 275 VPAVAIAGYTNAGKSSLLNRLTGAGVLVENALFATLDPTIRKATTQDG-RHFTFSDTVGF 333 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELRK 271 +++ HQ L+ +++H+V EE V+ A + +L E+ A + Sbjct: 334 VRHLPHQIVEAFRSTLEEVAEADLVVHVVDGTHPDPEEQVR-AVRAVLAEVGAD-----R 387 Query: 272 KIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E++ +++ D D +TL R K + S+ +GHG+ + + ++ Sbjct: 388 LPELLVVNKTDAADEETLLRLK-----RLWPEAILVSAHSGHGVDDLRRVVEARL 437 >gi|114765527|ref|ZP_01444635.1| GTP-binding protein Era [Pelagibaca bermudensis HTCC2601] gi|114542120|gb|EAU45152.1| GTP-binding protein Era [Roseovarius sp. HTCC2601] Length = 301 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 5/163 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST + AK I + T + G+ EG + + D PG+ K Sbjct: 8 VALIGEPNAGKSTLTNRMVGAKVSIVTHKVQTTRARIRGVAMEGDSQLVFVDTPGLFKPR 67 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 + + + I+ L E + + + L + + + +++ Sbjct: 68 RR---LDRAMVAAAWGGAADADIIVLLVEAHRGITEGVERILEGLADLPQGRTVALAINK 124 Query: 281 IDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECL 322 ID V++ L + +L + F S+ GHG+ + E L Sbjct: 125 IDRVEAKVLLKLTEDLNERYAFAKTFMISAEKGHGVKDLREWL 167 >gi|15672333|ref|NP_266507.1| GTP-binding protein Era [Lactococcus lactis subsp. lactis Il1403] gi|125623240|ref|YP_001031723.1| GTP-binding protein Era [Lactococcus lactis subsp. cremoris MG1363] gi|281490898|ref|YP_003352878.1| GTP-binding protein Era [Lactococcus lactis subsp. lactis KF147] gi|61223689|sp|P0A3C1|ERA_LACLA RecName: Full=GTPase Era gi|61223690|sp|P0A3C2|ERA_LACLM RecName: Full=GTPase Era gi|8163994|gb|AAF73946.1|AF233268_1 GTP-binding protein Era [Lactococcus lactis subsp. cremoris MG1363] gi|12723220|gb|AAK04449.1|AE006272_3 GTP-binding protein Era [Lactococcus lactis subsp. lactis Il1403] gi|124492048|emb|CAL96976.1| GTP-binding protein era homolog [Lactococcus lactis subsp. cremoris MG1363] gi|281374656|gb|ADA64176.1| GTP-binding protein Era [Lactococcus lactis subsp. lactis KF147] gi|300069990|gb|ADJ59390.1| GTP-binding protein Era [Lactococcus lactis subsp. cremoris NZ9000] gi|326405932|gb|ADZ63003.1| GTP-binding protein Era [Lactococcus lactis subsp. lactis CV56] Length = 303 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 25/176 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTF+ V K I +D P TT GI ++ + D PGI K Sbjct: 11 VAILGRPNVGKSTFMNHVMGQKIAIMSDKPQTTRNKIQGIYTTENEQIVFIDTPGIHKPH 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + +GD ++ T V+L +V+A +E I++ L + I+ Sbjct: 71 N---ALGDFMVQSAYSTLRECDVVLFMVAA-DEPRSTGENMIIERLKKAEVPV-----IL 121 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSIT------GHGIPQILECLHDKI 326 +++ID + D L + +Q EFS + G+ ++++ L +K+ Sbjct: 122 VVNKIDKIHPDRLFEIVADYTSQ-----MEFSEVVPISAKQGNNTERLIDTLSEKL 172 >gi|310828992|ref|YP_003961349.1| hypothetical protein ELI_3427 [Eubacterium limosum KIST612] gi|308740726|gb|ADO38386.1| hypothetical protein ELI_3427 [Eubacterium limosum KIST612] Length = 828 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 18/175 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K G K+ I+ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNALTGSNQYVGNWPGVTVEKKEGKLK-GNKDVIIMDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ER +++I+ + +E N+ Q +EL + ++ + Sbjct: 64 YTLEEVVARNYLINERPDAIINIIDGTNIERNLYLTTQI---------TELGIPV-VIAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 + +D V+ + L+ G E S++ G G+ + +E K I G+N Sbjct: 114 NMMDLVEKNGDKIDVRRLSKDLGCEVVEISALKGKGLKEAVE----KAVKIAGKN 164 >gi|297710098|ref|XP_002831742.1| PREDICTED: guanine nucleotide-binding protein-like 3-like protein-like [Pongo abelii] Length = 686 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGY-KEFI-LADIPGIIK 218 +G++GLPN GKS+ + S+ R++ + P T + ++E Y +FI L D PGI+ Sbjct: 359 VGVVGLPNVGKSSLINSLKRSRACGVGAVPGITKF-----MQEVYLDKFIRLLDAPGIVP 413 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + G R H ++ L V+ +E +Q +C L+E+S Y Sbjct: 414 GPNSEVGTILRNCVHVQK---LADPVTPVETILQ---RCNLEEISNY 454 >gi|262304297|gb|ACY44741.1| GTP-binding protein [Stenochrus portoricensis] Length = 280 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + H+ E++ V+ I D + Sbjct: 35 IVDIAGLVKGASEGQGLGNAFLSHIRACDAIFHLCRVFEDDNVSHVEGDVNPIRD-IDII 93 Query: 266 NSELRKKIEIVGLSQIDTVDSDTL 289 N ELR K E L ID ++ L Sbjct: 94 NEELRLKDEETILGLIDKMERTVL 117 >gi|254821028|ref|ZP_05226029.1| GTPase [Mycobacterium intracellulare ATCC 13950] Length = 473 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 14/147 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGI 216 + I I+G NAGKS+ L ++T A + D F TL P + EG + F+L D G Sbjct: 249 VPSIAIVGYTNAGKSSLLNALTGAGVLVQDALFATLEPTTRRAEFDEG-RSFVLTDTVGF 307 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAYNSEL 269 ++ H + + F L+ +L+H+V + N + A Q + D ++ ++ Sbjct: 308 VR--HLPTQLVEAFRSTLEEVVDADLLVHVVDGSDVNPLAQINAVRQVVTDVIADHDGA- 364 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNEL 296 E++ ++++D LA+ ++ L Sbjct: 365 -PPPELLVVNKVDAASDLALAKLRHAL 390 >gi|22328152|ref|NP_201448.2| GTP binding / RNA binding [Arabidopsis thaliana] gi|17473914|gb|AAL38371.1| GTP-binding protein-like [Arabidopsis thaliana] gi|20259794|gb|AAM13244.1| GTP-binding protein-like [Arabidopsis thaliana] gi|332010835|gb|AED98218.1| GTP-binding protein Era [Arabidopsis thaliana] Length = 427 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGII-KN 219 + ++G+PN GKST + K I D P TT + LGI + IL D PG+I K Sbjct: 132 VAVVGMPNVGKSTLSNQMIGQKISIVTDKPQTTRHRILGICSSPEYQMILYDTPGVIEKK 191 Query: 220 AHQ 222 H+ Sbjct: 192 MHR 194 >gi|294084099|ref|YP_003550857.1| GTP-binding protein Era [Candidatus Puniceispirillum marinum IMCC1322] gi|292663672|gb|ADE38773.1| GTP-binding protein Era [Candidatus Puniceispirillum marinum IMCC1322] Length = 303 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 12/82 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGI---- 216 + +IG PNAGKST + ++ K I T + GI +G + I D PGI Sbjct: 13 VALIGAPNAGKSTLMNAMVGQKVSIVTPKVQTTRSRVRGIAMQGTAQIIFVDTPGIFTPK 72 Query: 217 -------IKNAHQGAGIGDRFL 231 ++ A QGA GD L Sbjct: 73 RRLDRAMVQAAWQGAEDGDVLL 94 >gi|290475995|ref|YP_003468891.1| GTP-binding protein, essential for cell growth [Xenorhabdus bovienii SS-2004] gi|289175324|emb|CBJ82127.1| GTP-binding protein, essential for cell growth [Xenorhabdus bovienii SS-2004] Length = 496 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 19/169 (11%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + +EFI+ D GI Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGQEFIIIDTGGI 60 Query: 217 IKN-----AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 H A + L E ++L +V A + A I L + R+ Sbjct: 61 DGTEDGVETHMAA----QSLMAIEEADIVLFMVDA-RSGMMPADHAIAKHLRS-----RE 110 Query: 272 KIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 K + ++ D +D+DT + L G + + ++ G G+ Q++E Sbjct: 111 KATFLVANKTDGIDTDTAIPEFYSLG--LGDI-YSIAASHGRGVTQLIE 156 >gi|118602251|ref|YP_903466.1| small GTP-binding protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567190|gb|ABL01995.1| GTP-binding protein HflX [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 441 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 10/130 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I + G NAGKST +T A+ D F TL + ++ E + D G I++ Sbjct: 207 IALAGYTNAGKSTLFNVLTNAEVFANDQLFATLNSTIRRVILPASGEAAIVDTVGFIQDL 266 Query: 221 -HQGAGIGDRFLKHTERTHVLLHIVSALEE-NVQAAYQC--ILDELSAYNSELRKKIEIV 276 H L+ T+ +VLLHIV A +E N++ Q I+ E+ A N I+ Sbjct: 267 PHDLVDAFKSTLEETKCANVLLHIVDAADEYNIEKIAQVEDIIFEIGASNIP-----SIL 321 Query: 277 GLSQIDTVDS 286 +++ID +D+ Sbjct: 322 VMNKIDCLDN 331 >gi|315655233|ref|ZP_07908134.1| GTP-binding protein [Mobiluncus curtisii ATCC 51333] gi|315490488|gb|EFU80112.1| GTP-binding protein [Mobiluncus curtisii ATCC 51333] Length = 525 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 18/175 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 I + I+G NAGKS+ L + A + D F TL P++ EG +E+ LAD G Sbjct: 287 IPAVAIVGYTNAGKSSLLNRLAGANLLVHDALFATLDPSVRRAHTPEG-REYTLADTVGF 345 Query: 217 IKNAHQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE- 274 ++ R L+ T ++LH+V + A + L EL + IE Sbjct: 346 VRRLPTELVEAFRSTLEETAMADLILHVVDGSNPDPMAQVAAVDATL-----ELVEGIEE 400 Query: 275 ---IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ +++ID + LA ++ L + S++TG GI + + + ++ Sbjct: 401 VPVMMVVNKIDQASAPALALLRHSLPEA-----YYVSALTGEGIEALQQAIAGRL 450 >gi|253681750|ref|ZP_04862547.1| ferrous iron transport protein B [Clostridium botulinum D str. 1873] gi|253561462|gb|EES90914.1| ferrous iron transport protein B [Clostridium botulinum D str. 1873] Length = 671 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 7/105 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 ++ I +IG PN GKST ++T +K I ++P T+ G VK + + + D+PG Sbjct: 1 MSTIALIGNPNCGKSTIFNAITGSKQHIGNWPGVTVEKKEGKVKVDNEVYTIIDLPGTYS 60 Query: 219 ---NAHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCI 258 + D LK E+ V++++V A +E N+ Q I Sbjct: 61 LGAYSEDERVARDYILK--EKPDVVVNVVDASNIERNLYLTTQLI 103 >gi|297559661|ref|YP_003678635.1| GTP-binding proten HflX [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844109|gb|ADH66129.1| GTP-binding proten HflX [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 512 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 15/167 (8%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADI 213 + + + + I G NAGKS+ L +T A + + F TL P + + + F L+D Sbjct: 286 RTRSVPSVAIAGYTNAGKSSLLNRLTGAGVLVENALFATLDPTVRQARTPDGRGFTLSDT 345 Query: 214 PGIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSEL 269 G +++ HQ L+ + ++LH+V + + +A + + ++ A + Sbjct: 346 VGFVRHLPHQLVEAFRSTLEEVADSDLVLHVVDGSHPDPESQISAVRHVFADIDAGDVP- 404 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIP 316 E++ ++++D D D L L T+ + E S+ TG G+P Sbjct: 405 ----ELIVVNKVDAADPDVL----KALRTRYPDM-VEVSARTGEGVP 442 >gi|23012893|ref|ZP_00052876.1| COG0370: Fe2+ transport system protein B [Magnetospirillum magnetotacticum MS-1] Length = 251 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 30/158 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI----- 216 + ++G PN GK+T +T + ++ ++P T+ +G +E+ L D+PGI Sbjct: 5 VAVVGNPNCGKTTLFNVLTGSTQQVGNWPGVTVEKKVGTYLLSGQEYDLVDLPGIYMIGG 64 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 I + + ++ E V+++IV A LE N+ Q + E+R + Sbjct: 65 ISKGSEDERVSRDYILSGE-PEVVVNIVDAYNLERNLYLTAQLL---------EMRVPL- 113 Query: 275 IVGLSQIDT-------VDSDTLARKKNELATQCGQVPF 305 +V ++ +D +D + L+R A C VP Sbjct: 114 VVAVNMMDLAEKSGIHIDVEALSR-----ALDCPVVPL 146 >gi|293192306|ref|ZP_06609417.1| GTP-binding protein [Actinomyces odontolyticus F0309] gi|292820221|gb|EFF79215.1| GTP-binding protein [Actinomyces odontolyticus F0309] Length = 526 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 16/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I G NAGKST L +T A + D F TL P + + +E+ L D G + Sbjct: 294 VPSVAIAGYTNAGKSTLLNRLTDAGVLVQDALFATLDPTVRRARAADGREYTLTDAVGFV 353 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAYNSELRKK 272 +N Q L+ + +++H+V A + VQ A + ++D + SE+ Sbjct: 354 RNLPTQLVEAFRSTLEEVGQADIIVHVVDAAHPDPVSQVQ-AVRSVIDTIEGA-SEI--- 408 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E++ L++ D + +A + VP S+ TG G+ + L D + Sbjct: 409 PELIALNKADLASPEQIALLRTVF---PNAVP--LSAHTGWGVEALRAALEDML 457 >gi|260576289|ref|ZP_05844281.1| GTP-binding protein Era [Rhodobacter sp. SW2] gi|259021557|gb|EEW24861.1| GTP-binding protein Era [Rhodobacter sp. SW2] Length = 314 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 + +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 20 VALIGEPNAGKSTLLNKMVGAKVSIVTHKVQTTRARIRGVAMEGAAQIVFVDTPGLFR 77 >gi|182624431|ref|ZP_02952215.1| GTP binding protein [Clostridium perfringens D str. JGS1721] gi|177910434|gb|EDT72811.1| GTP binding protein [Clostridium perfringens D str. JGS1721] Length = 597 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 28/186 (15%) Query: 160 ADIGIIGLPNAGKSTFLASV---------TRAKPKI--ADYPFTTLYPNLGIVK-EGYKE 207 + + ++G NAGKST ++ T+AK K+ AD F TL +K ++ Sbjct: 364 SQVSLVGYTNAGKSTLRNTLCAESASTLATQAKDKVFEADMLFATLDTTTRAIKLPDNRD 423 Query: 208 FILADIPGII-KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELS 263 L D G + K H+ L+ + +L H+V A +N Q A + +L EL Sbjct: 424 ITLTDTVGFVSKLPHELVEAFKSTLEEVIYSDLLCHVVDASSDNAQEEIIAVEKVLGELK 483 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGH---GIPQILE 320 A S +I+ L++ID D + L NEL + + + I+ + +LE Sbjct: 484 ALES-----AKILVLNKIDKADEEKL----NELEAKYSSIYNKVVKISARERINLDDLLE 534 Query: 321 CLHDKI 326 + +++ Sbjct: 535 AISEEL 540 >gi|330993264|ref|ZP_08317200.1| GTP-binding protein hflX [Gluconacetobacter sp. SXCC-1] gi|329759666|gb|EGG76174.1| GTP-binding protein hflX [Gluconacetobacter sp. SXCC-1] Length = 436 Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 29/179 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + ++G NAGKST ++T A D F TL P + GI + IL+D G I + Sbjct: 208 VALVGYTNAGKSTLFNALTGASVYAQDQLFATLDPTMRGIQLPSGRRVILSDTVGFISDL 267 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK--IEIV-G 277 T ++ + LEE +A + ++S +S +++ IE++ G Sbjct: 268 P---------------TELIAAFRATLEEVAEADIILHVRDVSHPDSASQRQDVIEVLEG 312 Query: 278 LSQIDTVDSDTLAR-----KKNELA---TQCGQVP--FEFSSITGHGIPQILECLHDKI 326 +++ T++ D R K +L G P S+ITG G+P +L + +++ Sbjct: 313 MARNGTIEEDWQGRVIEVLNKADLVGGREAVGARPGNVVISAITGDGLPDLLAAIDERM 371 >gi|291535957|emb|CBL09069.1| ferrous iron transporter FeoB [Roseburia intestinalis M50/1] Length = 730 Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 79/162 (48%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K G+K+ ++ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLK-GHKDVVIMDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R +R +L+IV + +E N+ + Q + EL + I+ + Sbjct: 64 YTLEEVVARNYLIGDRPDAILNIVDGTNIERNLYLSTQLM---------ELGIPV-IMAI 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V+ + ++L+ + G E S++ G GI + E Sbjct: 114 NMMDLVEKNGDKIHIDKLSKKLGCEVVEISALKGTGIQKAAE 155 >gi|281342312|gb|EFB17896.1| hypothetical protein PANDA_019972 [Ailuropoda melanoleuca] Length = 528 Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGY-KEFI-LADIPGIIK 218 +G++GLPN GKS+ + S+ R++ + P T + ++E Y +FI L D PGI+ Sbjct: 229 VGVVGLPNVGKSSLINSLKRSRACSVGAVPGITKF-----MQEVYLDKFIRLLDAPGIVP 283 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + G R H ++ L V+ +E +Q +C L+E+S Y Sbjct: 284 GPNSEVGTILRNCVHVQK---LADPVTPVETILQ---RCNLEEISNY 324 >gi|227828124|ref|YP_002829904.1| GTP-binding proten HflX [Sulfolobus islandicus M.14.25] gi|227830831|ref|YP_002832611.1| GTP-binding proten HflX [Sulfolobus islandicus L.S.2.15] gi|229579727|ref|YP_002838126.1| GTP-binding proten HflX [Sulfolobus islandicus Y.G.57.14] gi|229581605|ref|YP_002840004.1| GTP-binding proten HflX [Sulfolobus islandicus Y.N.15.51] gi|238620324|ref|YP_002915150.1| GTP-binding proten HflX [Sulfolobus islandicus M.16.4] gi|284998346|ref|YP_003420114.1| small GTP-binding protein [Sulfolobus islandicus L.D.8.5] gi|227457279|gb|ACP35966.1| GTP-binding proten HflX [Sulfolobus islandicus L.S.2.15] gi|227459920|gb|ACP38606.1| GTP-binding proten HflX [Sulfolobus islandicus M.14.25] gi|228010442|gb|ACP46204.1| GTP-binding proten HflX [Sulfolobus islandicus Y.G.57.14] gi|228012321|gb|ACP48082.1| GTP-binding proten HflX [Sulfolobus islandicus Y.N.15.51] gi|238381394|gb|ACR42482.1| GTP-binding proten HflX [Sulfolobus islandicus M.16.4] gi|284446242|gb|ADB87744.1| small GTP-binding protein [Sulfolobus islandicus L.D.8.5] gi|323475186|gb|ADX85792.1| GTP-binding proten HflX [Sulfolobus islandicus REY15A] gi|323477918|gb|ADX83156.1| GTP-binding proten HflX [Sulfolobus islandicus HVE10/4] Length = 356 Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 22/183 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I +GI+G N+GK++ S+T K+ FTT+ P + ++ +L D G I+ Sbjct: 179 IPSVGIVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMSPKRYALSINNRKIMLVDTVGFIR 238 Query: 219 NAHQGAGIGDRF---LKHTERTHVLLHIVSA------LEENVQAAYQCILDELSAYNSEL 269 I D F L + + L+ ++ + L E +Q++++ IL E+ + Sbjct: 239 GI--PPQIVDAFFVTLSEAKYSDALILVIDSMFSENLLIETLQSSFE-ILREIGVSGKPI 295 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKN---ELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +V L++ID +D D L +K N +L+ + F+ I+ LE L ++I Sbjct: 296 -----LVALNKIDKIDGD-LYKKLNLIEKLSKELYSPIFDVIPISALKRTN-LELLRERI 348 Query: 327 FSI 329 + + Sbjct: 349 YQL 351 >gi|170720260|ref|YP_001747948.1| GTP-binding protein Era [Pseudomonas putida W619] gi|226741227|sp|B1J4E1|ERA_PSEPW RecName: Full=GTPase Era gi|169758263|gb|ACA71579.1| GTP-binding protein Era [Pseudomonas putida W619] Length = 300 Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ K Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGDVQAIYVDTPGMHK 69 >gi|254481405|ref|ZP_05094650.1| GTP-binding protein Era [marine gamma proteobacterium HTCC2148] gi|214038568|gb|EEB79230.1| GTP-binding protein Era [marine gamma proteobacterium HTCC2148] Length = 299 Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + I+G PN GKST L + K I P TT + LGI E + I D PG+ K Sbjct: 11 VAIVGRPNVGKSTLLNHILGQKISITSRKPQTTRHQVLGIKTENDSQVIFVDTPGLHK 68 >gi|145347979|ref|XP_001418436.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578665|gb|ABO96729.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 519 Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 18/174 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII-KN 219 + + G NAGKS+ L +T A+ D F TL P ++ ++ D G I K Sbjct: 297 VSLAGYTNAGKSSLLNKLTNAEVLAEDKLFATLDPTTRRLELANGMTVLMTDTVGFIQKL 356 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV---SALEENVQAAYQCILDELSAYNSELRKKIEIV 276 Q L+ + ++LH+V S L E + +LDEL A +++ Sbjct: 357 PTQLVAAFRATLEEVLESSLILHVVDISSDLSEAHMSTVDSVLDELDAGEIP-----QLL 411 Query: 277 GLSQIDTVDSDTLARKKNELATQ-CGQVPFEFSSITGHGIPQILECLHDKIFSI 329 ++ID V D R + E+A + G V S++TG G L+ L DKI I Sbjct: 412 VWNKIDNV-LDEEERLEIEIAAEDAGAVV--VSTLTGEG----LDALQDKIVEI 458 >gi|219849958|ref|YP_002464391.1| GTP-binding proten HflX [Chloroflexus aggregans DSM 9485] gi|219544217|gb|ACL25955.1| GTP-binding proten HflX [Chloroflexus aggregans DSM 9485] Length = 461 Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 23/176 (13%) Query: 146 LGQEKIIWLKLKL------------------IADIGIIGLPNAGKSTFLASVTRAKPKIA 187 L + +I WLK +L + I ++G NAGKST L ++T A Sbjct: 204 LIERRIAWLKEQLADVHRHRELYRQRRRQTGVPIIALVGYTNAGKSTLLNAMTGADVLAE 263 Query: 188 DYPFTTLYPNL-GIVKEGYKEFILADIPGII-KNAHQGAGIGDRFLKHTERTHVLLHIVS 245 D F TL P ++ G ++ D G I K Q L+ E +LLH+V Sbjct: 264 DKLFATLDPTTRQVLLPGNTVALMTDTVGFIQKLPPQLIAAFRATLEEIEEADLLLHVVD 323 Query: 246 ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCG 301 N Q Q + L + + + + L++ID ++ T A +++A + G Sbjct: 324 VTHRNAQEHAQTVEQTLRELKVDHKPILTV--LNKIDLLEGAT-AEGIDQIAAEMG 376 >gi|119773889|ref|YP_926629.1| GTP-binding protein HflX [Shewanella amazonensis SB2B] gi|119766389|gb|ABL98959.1| GTP-binding protein HflX [Shewanella amazonensis SB2B] Length = 443 Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust. Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 34/205 (16%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII-KNA 220 ++G NAGKS+ + ++T ++ + + F TL + + + +++D G I K Sbjct: 225 ALVGYTNAGKSSLMRALTGSEVLVENKLFATLDTTVRALSPQTQPRILISDTVGFINKLP 284 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQ------------------------ 256 H L+ + +LL++V A + + +A + Sbjct: 285 HDLVPAFHSTLEEAKDASLLLYVVDASDADFRAQLEVVRNVLGQSKLAGKDKLLLLNKVD 344 Query: 257 CILDEL-SAYNSELRKKIEIVGLSQIDT--VDSDTLARKKNELATQCGQVPFEFSSITG- 312 C+ DE SA E ++I LSQ D V + N+L + C +P+ S++ G Sbjct: 345 CLSDEARSALAQEFPDALQISALSQEDVARVHQAIVDAIANQLLSACFNIPYAASALMGE 404 Query: 313 -HGIPQIL-ECLHDK--IFSIRGEN 333 HG QI+ E H+ ++RG + Sbjct: 405 VHGRMQIIDEAYHESGLRITVRGRS 429 >gi|209964795|ref|YP_002297710.1| GTP-binding protein Era [Rhodospirillum centenum SW] gi|209958261|gb|ACI98897.1| GTP-binding protein Era [Rhodospirillum centenum SW] Length = 340 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 28/170 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIK-- 218 I ++G PNAGKST L ++ AK I TT LGI G + + D PGI K Sbjct: 50 IALVGAPNAGKSTLLNALVGAKVSIVSPKVQTTRSRVLGIGITGDSQLLFVDTPGIFKPK 109 Query: 219 ---------NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 A QGA D +++ + A + + I++ L Sbjct: 110 RRLDRAMVAAAWQGATDAD----------LIVMLYDASNDRLDEDTLGIIERLKEAG--- 156 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQ-CGQVPFEFSSITGHGIPQI 318 + I+ L+++D + + L + EL + F S++TG G+ + Sbjct: 157 --RTAILALNKVDLIKREKLLKLAAELDSHGIFTRTFMISALTGDGLADL 204 >gi|116511210|ref|YP_808426.1| GTP-binding protein Era [Lactococcus lactis subsp. cremoris SK11] gi|122940350|sp|Q031W8|ERA_LACLS RecName: Full=GTPase Era gi|116106864|gb|ABJ72004.1| GTPase [Lactococcus lactis subsp. cremoris SK11] Length = 303 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 25/176 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTF+ V K I +D P TT GI ++ + D PGI K Sbjct: 11 VAILGRPNVGKSTFMNHVMGQKIAIMSDKPQTTRNKIQGIYTTENEQIVFIDTPGIHKPH 70 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + +GD ++ T V+L +V+A +E I++ L + I+ Sbjct: 71 N---ALGDFMVQSAYSTLRECDVVLFMVAA-DEPRSTGENMIIERLKKAEVPV-----IL 121 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSIT------GHGIPQILECLHDKI 326 +++ID + D L + +Q EFS + G+ ++++ L +K+ Sbjct: 122 VVNKIDKIHPDRLFEIVADYTSQ-----MEFSEVVPISAKQGNNTERLIDTLSEKL 172 >gi|261820577|ref|YP_003258683.1| GTP-binding protein EngA [Pectobacterium wasabiae WPP163] gi|261604590|gb|ACX87076.1| ribosome-associated GTPase EngA [Pectobacterium wasabiae WPP163] Length = 495 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 17/170 (10%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D GI Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIVDTGGI 60 Query: 217 IKNAHQGAGIGDRF----LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G+ R L E ++L +V A + A DE A + R+K Sbjct: 61 DGTED---GVETRMAGQSLVAIEEADIVLFMVDARAGLMPA------DEGIAKHLRSREK 111 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + ++ ++ D +D D + L G+V + ++ G G+ +LE + Sbjct: 112 MTVLVANKTDGLDPDMVTADFYSLG--MGEV-YAIAASHGRGVTSLLETV 158 >gi|108799131|ref|YP_639328.1| GTP-binding protein, HSR1-related [Mycobacterium sp. MCS] gi|119868246|ref|YP_938198.1| GTP-binding protein, HSR1-related [Mycobacterium sp. KMS] gi|108769550|gb|ABG08272.1| GTP-binding protein, HSR1-related protein [Mycobacterium sp. MCS] gi|119694335|gb|ABL91408.1| GTP-binding protein, HSR1-related protein [Mycobacterium sp. KMS] Length = 483 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 15/167 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I+G NAGKS+ L ++T A + + F TL P G +G + F+L D G Sbjct: 259 VPSVAIVGYTNAGKSSLLNALTGAGVLVENALFATLEPTTRRGEFDDG-RPFVLTDTVGF 317 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK- 272 ++ H + + F L+ +L+H+V + N A + + ++ +E K Sbjct: 318 VR--HLPTQLIEAFRSTLEEVADADLLVHVVDGSDANPLAQISAVREVINEVIAEQNAKP 375 Query: 273 -IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 E++ +++ID D +LA + L + F S+ TG G+ ++ Sbjct: 376 APELLVVNKIDAADGLSLAHLRRALP----EAVF-VSARTGQGLDRL 417 >gi|89894328|ref|YP_517815.1| hypothetical protein DSY1582 [Desulfitobacterium hafniense Y51] gi|219668751|ref|YP_002459186.1| GTP-binding proten HflX [Desulfitobacterium hafniense DCB-2] gi|89333776|dbj|BAE83371.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219539011|gb|ACL20750.1| GTP-binding proten HflX [Desulfitobacterium hafniense DCB-2] Length = 530 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 19/152 (12%) Query: 159 IADIGIIGLPNAGKSTFLASV---TRAK---PKIADYPFTTLYPNL-GIVKEGYKEFILA 211 I I ++G NAGK+TFL TR+K K D F TL P + GI + E +L+ Sbjct: 361 IPLIALVGYTNAGKTTFLQKAMEQTRSKGESVKGEDKLFATLDPIVRGIRLDQRTEILLS 420 Query: 212 DIPGII-KNAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYN 266 D G I K HQ L+ + VL+H++ A E ++ IL++L ++ Sbjct: 421 DTVGFIQKLPHQLLHAFLATLEEVQNADVLIHVLDASHPRALERADTVHK-ILEQLECHH 479 Query: 267 SELRKKIEIVGLSQIDTVDSDT-LARKKNELA 297 K + L++ID +D + L+R EL+ Sbjct: 480 -----KPRLTLLNKIDQLDHPSDLSRLAQELS 506 >gi|300691800|ref|YP_003752795.1| GTP-binding protein hflX, GTPase activity [Ralstonia solanacearum PSI07] gi|299078860|emb|CBJ51521.1| GTP-binding protein hflX, GTPase activity [Ralstonia solanacearum PSI07] Length = 417 Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST ++T+A+ A+ F TL + + +G +L+D G I++ Sbjct: 204 VSLVGYTNAGKSTLFNALTKARAYAANQLFATLDTTSRRLYLDGLGNVVLSDTVGFIRDL 263 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 Q L+ T VLLH+V A Sbjct: 264 PTQLVAAFRATLEETVHADVLLHVVDA 290 >gi|168208661|ref|ZP_02634286.1| GTP binding protein [Clostridium perfringens B str. ATCC 3626] gi|170712976|gb|EDT25158.1| GTP binding protein [Clostridium perfringens B str. ATCC 3626] Length = 597 Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 28/186 (15%) Query: 160 ADIGIIGLPNAGKSTFLASV---------TRAKPKI--ADYPFTTLYPNLGIVK-EGYKE 207 + + ++G NAGKST ++ T+AK K+ AD F TL +K ++ Sbjct: 364 SQVSLVGYTNAGKSTLRNTLCAESASTLATQAKDKVFEADMLFATLDTTTRAIKLPDNRD 423 Query: 208 FILADIPGII-KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELS 263 L D G + K H+ L+ + +L H+V A +N Q A + +L EL Sbjct: 424 ITLTDTVGFVSKLPHELVEAFKSTLEEVIYSDLLCHVVDASSDNAQEEIIAVEKVLGELK 483 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGH---GIPQILE 320 A S +I+ L++ID D + L NEL + + + I+ + +LE Sbjct: 484 ALES-----AKILVLNKIDKADEEKL----NELEAKYSSIYNKVVKISARERINLDDLLE 534 Query: 321 CLHDKI 326 + +++ Sbjct: 535 AISEEL 540 >gi|46581638|ref|YP_012446.1| GTP-binding protein HflX [Desulfovibrio vulgaris str. Hildenborough] gi|46451061|gb|AAS97706.1| GTP-binding protein HflX [Desulfovibrio vulgaris str. Hildenborough] gi|311235280|gb|ADP88134.1| GTP-binding proten HflX [Desulfovibrio vulgaris RCH1] Length = 547 Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 4/124 (3%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAH 221 ++G NAGKST L ++T A+ + F TL P ++ +E ILAD G I+N Sbjct: 334 SLVGYTNAGKSTLLNALTNAEVLAENKLFATLDPTTRRLRFPEERELILADTVGFIRNLP 393 Query: 222 QGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 + R L+ E +L+H+ A + + + D L E+ ++ L++ Sbjct: 394 KELVEAFRATLEELEAADLLIHVADAGHPELDRQLRAVEDIL--VEMEMHDIPRLLVLNK 451 Query: 281 IDTV 284 DTV Sbjct: 452 WDTV 455 >gi|301168789|emb|CBW28380.1| predicted GTP-binding protein [Haemophilus influenzae 10810] Length = 503 Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHIAGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L + ++L +V A +A ++ Y + + KI +V Sbjct: 65 EEGVEEKMAEQSLLAIDEADIVLFLVDA-----RAGLTAADIGIANYLRQRQNKITVVVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G++ + ++ G G+ Q++E Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGEIE-QIAASQGRGVTQLME 158 >gi|148377384|ref|YP_001256260.1| GTP-binding protein Era [Mycoplasma agalactiae PG2] gi|226741223|sp|A5IXQ6|ERA_MYCAP RecName: Full=GTPase Era gi|148291430|emb|CAL58815.1| GTP binding protein era [Mycoplasma agalactiae PG2] Length = 290 Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 10/134 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I+G PN GKS+ L + + I ++ P TT +G+ E +F+ D PGI K Sbjct: 6 ISILGRPNVGKSSLLNKIIKYDLAIVSNVPQTTRDQIMGVYTEDGYQFVFVDTPGIHKPL 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + G + + +L + S + E++++ + IL+ ++ K +I +S Sbjct: 66 NLLGESLNKEAFSSLKDIDCVLFL-SPVNEDIKSGDKLILERIT------NAKNKIAVIS 118 Query: 280 QIDTVDS-DTLARK 292 +ID S D +A+K Sbjct: 119 KIDLAKSPDEIAKK 132 >gi|256830504|ref|YP_003159232.1| GTP-binding protein Era [Desulfomicrobium baculatum DSM 4028] gi|256579680|gb|ACU90816.1| GTP-binding protein Era [Desulfomicrobium baculatum DSM 4028] Length = 305 Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 5/71 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PNAGKSTFL V K I + P TT GI ++ I D PG+ Sbjct: 10 IALVGPPNAGKSTFLNKVLGEKIAIVSPKPQTTRTSITGIHTTAEEQIIFLDTPGV---- 65 Query: 221 HQGAGIGDRFL 231 H G +RFL Sbjct: 66 HTARGKLNRFL 76 >gi|188589733|ref|YP_001922155.1| ferrous iron transport protein B [Clostridium botulinum E3 str. Alaska E43] gi|188500014|gb|ACD53150.1| ferrous iron transport protein B [Clostridium botulinum E3 str. Alaska E43] Length = 714 Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 IG+ G PN GK+T +T + + ++P T+ G +K KE + D+PGI + Sbjct: 5 IGLAGNPNCGKTTMFNDLTGSTQYVGNWPGVTVEKKGGKLKWN-KEVEIVDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ++ V+++IV S +E N+ Q + EL ++ L Sbjct: 64 YTLEEVVTRDFMMNDKPDVIINIVDGSNIERNLYLTTQVL--ELGIPT--------VIAL 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V + +L+ G E S+I G G +++E Sbjct: 114 NMMDIVKKNGDKINIEKLSQSLGCPVIETSAIKGDGTKKVVE 155 >gi|18310941|ref|NP_562875.1| GTP binding protein [Clostridium perfringens str. 13] gi|110800879|ref|YP_696639.1| GTP binding protein [Clostridium perfringens ATCC 13124] gi|169343715|ref|ZP_02864714.1| GTP binding protein [Clostridium perfringens C str. JGS1495] gi|18145623|dbj|BAB81665.1| GTP binding protein [Clostridium perfringens str. 13] gi|110675526|gb|ABG84513.1| GTP binding protein [Clostridium perfringens ATCC 13124] gi|169298275|gb|EDS80365.1| GTP binding protein [Clostridium perfringens C str. JGS1495] Length = 597 Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 28/186 (15%) Query: 160 ADIGIIGLPNAGKSTFLASV---------TRAKPKI--ADYPFTTLYPNLGIVK-EGYKE 207 + + ++G NAGKST ++ T+AK K+ AD F TL +K ++ Sbjct: 364 SQVSLVGYTNAGKSTLRNTLCAESASTLATQAKDKVFEADMLFATLDTTTRAIKLPDNRD 423 Query: 208 FILADIPGII-KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELS 263 L D G + K H+ L+ + +L H+V A +N Q A + +L EL Sbjct: 424 ITLTDTVGFVSKLPHELVEAFKSTLEEVIYSDLLCHVVDASSDNAQEEIIAVEKVLGELK 483 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGH---GIPQILE 320 A S +I+ L++ID D + L NEL + + + I+ + +LE Sbjct: 484 ALES-----AKILVLNKIDKADEEKL----NELEAKYSSIYNKVVKISARERINLDDLLE 534 Query: 321 CLHDKI 326 + +++ Sbjct: 535 AISEEL 540 >gi|328947725|ref|YP_004365062.1| ferrous iron transport protein B [Treponema succinifaciens DSM 2489] gi|328448049|gb|AEB13765.1| ferrous iron transport protein B [Treponema succinifaciens DSM 2489] Length = 755 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 14/157 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K G K+ ++ D+PGI + Sbjct: 6 IALAGNPNCGKTTMFNNLTGSNQYVGNWPGVTVEKKEGKMK-GVKDVVVTDLPGIYSLSP 64 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R + +L +V A +E N+ Q + EL K ++ L Sbjct: 65 YTSEEVVSRDYLIKDNPDAILDLVDATNIERNLYLTTQLL---------ELGKP-TVIAL 114 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 + ID + + +L + G E S++ G G+ Sbjct: 115 NMIDVLKKSGDSVDTEKLQAELGCTIIETSALKGTGV 151 >gi|300704408|ref|YP_003746011.1| GTP-binding protein HflX [Ralstonia solanacearum CFBP2957] gi|299072072|emb|CBJ43404.1| GTP-binding protein hflX, GTPase activity [Ralstonia solanacearum CFBP2957] Length = 417 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST ++T+A+ A+ F TL + + +G +L+D G I++ Sbjct: 204 VSLVGYTNAGKSTLFNALTKARTYAANQLFATLDTTSRRLYLDGLGNVVLSDTVGFIRDL 263 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 Q L+ T VLLH+V A Sbjct: 264 PTQLVAAFRATLEETVHADVLLHVVDA 290 >gi|294340984|emb|CAZ89379.1| GTP-binding protein era [Thiomonas sp. 3As] Length = 301 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPG 215 + I+G PN GKST L ++ AK I + TT + LG+ G +F D PG Sbjct: 15 VAIVGRPNVGKSTLLNALVGAKVSITSHKAQTTRHRILGVTTRGASQFAFVDTPG 69 >gi|269120355|ref|YP_003308532.1| GTP-binding protein Era [Sebaldella termitidis ATCC 33386] gi|268614233|gb|ACZ08601.1| GTP-binding protein Era [Sebaldella termitidis ATCC 33386] Length = 293 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 8/142 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I I+G PN GKST + + K I T + GIV +G ++I D PGI K Sbjct: 6 IAIVGRPNVGKSTMMNKLIEEKVAIVSNKSGTTRDRIKGIVNKGENQYIFMDTPGIHKPR 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H G + + L+ + ++ ++ +E + + + D + A N+ + ++ ++ Sbjct: 66 HLLGEHMTNVALETLKGVDAIMFLLDGTQE-ISTGDEFVNDHVKAVNTPV-----VLVIN 119 Query: 280 QIDTVDSDTLARKKNELATQCG 301 +ID + + K E+ + G Sbjct: 120 KIDKLSDQEIQDKLLEIKEKLG 141 >gi|229493118|ref|ZP_04386910.1| GTP-binding protein Era [Rhodococcus erythropolis SK121] gi|229319849|gb|EEN85678.1| GTP-binding protein Era [Rhodococcus erythropolis SK121] Length = 305 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 8/143 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 + +G PN GKST ++ +K I + P TT + GIV + + IL D PG+ K Sbjct: 11 VCFVGRPNTGKSTLTNALVGSKIAITSSRPQTTRHTIRGIVHREHAQLILVDTPGLHKPR 70 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 G + D V+ + A +E + + I+ ++ ++ K ++VG+ Sbjct: 71 TLLGQRLNDLVRDTYSEVDVICLCIPA-DEAIGPGDRWIVQQV----RQMAPKTKLVGIV 125 Query: 279 SQIDTVDSDTLARKKNELATQCG 301 ++ID V D + ++ L+T G Sbjct: 126 TKIDKVSRDAVGKQLLALSTLLG 148 >gi|229585363|ref|YP_002843865.1| GTP-binding proten HflX [Sulfolobus islandicus M.16.27] gi|228020413|gb|ACP55820.1| GTP-binding proten HflX [Sulfolobus islandicus M.16.27] Length = 356 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 22/183 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I +GI+G N+GK++ S+T K+ FTT+ P + ++ +L D G I+ Sbjct: 179 IPSVGIVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMSPKRYALSINNRKIMLVDTVGFIR 238 Query: 219 NAHQGAGIGDRF---LKHTERTHVLLHIVSA------LEENVQAAYQCILDELSAYNSEL 269 I D F L + + L+ ++ + L E +Q++++ IL E+ + Sbjct: 239 GI--PPQIVDAFFVTLSEAKYSDALILVIDSMFSENLLIETLQSSFE-ILREIGVSGKPI 295 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKN---ELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +V L++ID +D D L +K N +L+ + F+ I+ LE L ++I Sbjct: 296 -----LVALNKIDKIDGD-LYKKLNLIEKLSKELYSPIFDVIPISALKRTN-LELLRERI 348 Query: 327 FSI 329 + + Sbjct: 349 YQL 351 >gi|219110289|ref|XP_002176896.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411431|gb|EEC51359.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 455 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 28/41 (68%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK 202 + ++G PN GKS+ + +++ A P++ +YPFTT LG V+ Sbjct: 237 VVLVGAPNVGKSSIVRAISSADPEVNNYPFTTRGMTLGHVE 277 >gi|145635317|ref|ZP_01791020.1| GTP-binding protein EngA [Haemophilus influenzae PittAA] gi|145267461|gb|EDK07462.1| GTP-binding protein EngA [Haemophilus influenzae PittAA] Length = 504 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHIAGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L + ++L +V A +A ++ Y + + KI +V Sbjct: 65 EEGVEEKMAEQSLLAIDEADIVLFLVDA-----RAGLTAADIGIANYLRQRQNKITVVVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G++ + ++ G G+ Q++E Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGEIE-QIAASQGRGVTQLME 158 >gi|88810493|ref|ZP_01125750.1| GTP-binding protein [Nitrococcus mobilis Nb-231] gi|88792123|gb|EAR23233.1| GTP-binding protein [Nitrococcus mobilis Nb-231] Length = 435 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 5/108 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + +G NAGKS +T + IAD F TL L ++ G ++ I+AD G I+ Sbjct: 207 VSFVGYTNAGKSALFNRLTESHVYIADLLFATLDTTLRRIELPGSEQAIIADTVGFIREL 266 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV---SALEENVQAAYQCILDELSA 264 HQ L+ + +LLH++ L E + + +L ++ A Sbjct: 267 PHQLIAAFRSTLEEVAQADLLLHVIDIADPLREQRRWEVERVLSDIGA 314 >gi|331269947|ref|YP_004396439.1| ferrous iron transport protein B [Clostridium botulinum BKT015925] gi|329126497|gb|AEB76442.1| ferrous iron transport protein B [Clostridium botulinum BKT015925] Length = 671 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 17/166 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 ++ I +IG PN GKST ++T +K I ++P T+ G VK + + + D+PG Sbjct: 1 MSTIALIGNPNCGKSTIFNAITGSKQHIGNWPGVTVEKKEGKVKVDNEVYTIIDLPGTYS 60 Query: 219 ---NAHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKI 273 + D LK E+ V++++V A +E N+ Q I E+ + Sbjct: 61 LGAYSEDERVARDYILK--EKPDVVVNVVDASNIERNLYLTTQLI---------EMGANV 109 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 ++ L+ +D +S + L+ + ++ G+ ++L Sbjct: 110 -VIALNMMDEAESKNIKINVEALSKELNIPVISTVAVKKRGVKELL 154 >gi|270292907|ref|ZP_06199118.1| GTP-binding protein Era [Streptococcus sp. M143] gi|270278886|gb|EFA24732.1| GTP-binding protein Era [Streptococcus sp. M143] Length = 299 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEPRGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLAQIDDFRNQMDFKEIVP--ISALQGNNVSRLVDILSENL 169 >gi|242033759|ref|XP_002464274.1| hypothetical protein SORBIDRAFT_01g015410 [Sorghum bicolor] gi|241918128|gb|EER91272.1| hypothetical protein SORBIDRAFT_01g015410 [Sorghum bicolor] Length = 600 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 22/106 (20%) Query: 146 LGQEKIIWL--------KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN 197 LG E +I L +LKL +GI+GLPN GKS+ + S+ R++ + Sbjct: 248 LGAENLIRLLKNYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSR-------VVNVGST 300 Query: 198 LGIVK-----EGYKEFILADIPGII--KNAHQGAGIGDRFLKHTER 236 G+ + + K+ L D PG++ K++ G + R K E+ Sbjct: 301 PGVTRAMQEVQLDKKVKLLDCPGVVMLKSSSSGVSVALRNCKRVEK 346 >gi|229823200|ref|ZP_04449269.1| hypothetical protein GCWU000282_00498 [Catonella morbi ATCC 51271] gi|229787366|gb|EEP23480.1| hypothetical protein GCWU000282_00498 [Catonella morbi ATCC 51271] Length = 417 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP-NLGIVKEGYKEFILADIPGIIKN 219 +G++G NAGKST L +T+++ + D F TL P + +G F L D G I+ Sbjct: 203 VGLVGYTNAGKSTLLTQLTQSETYVQDQLFATLDPLTRRMPLKGEDRFTLTDTVGFIEE 261 >gi|169831271|ref|YP_001717253.1| HSR1-like GTP-binding protein [Candidatus Desulforudis audaxviator MP104C] gi|169638115|gb|ACA59621.1| GTP-binding protein, HSR1-related [Candidatus Desulforudis audaxviator MP104C] Length = 422 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 24/182 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKS+ L ++T A + D F TL P ++ E +L D G I++ Sbjct: 204 VALVGYTNAGKSSLLNALTGAVVSVEDRLFATLDPTSRQLRLPTNEVVVLTDTVGFIRHL 263 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKIEIV 276 H L+ +LLH+V QA A +L+EL A K ++ Sbjct: 264 PHHLVAAFRATLEEVVEADLLLHVVDLSHPAHQAHITAVDGVLEELGAGG-----KPRLM 318 Query: 277 GLSQIDTVDS---DTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 ++ D V+ D L R N++A S++TG G+ + + D + + R Sbjct: 319 VFNKTDLVEPGELDLLGR--NDVA---------VSALTGAGLDTLRAAVADALSTWRTRE 367 Query: 334 EF 335 F Sbjct: 368 RF 369 >gi|168215586|ref|ZP_02641211.1| GTP binding protein [Clostridium perfringens NCTC 8239] gi|182382219|gb|EDT79698.1| GTP binding protein [Clostridium perfringens NCTC 8239] Length = 597 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 28/186 (15%) Query: 160 ADIGIIGLPNAGKSTFLASV---------TRAKPKI--ADYPFTTLYPNLGIVK-EGYKE 207 + + ++G NAGKST ++ T+AK K+ AD F TL +K ++ Sbjct: 364 SQVSLVGYTNAGKSTLRNTLCAESASTLATQAKDKVFEADMLFATLDTTTRAIKLPDNRD 423 Query: 208 FILADIPGII-KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELS 263 L D G + K H+ L+ + +L H+V A +N Q A + +L EL Sbjct: 424 ITLTDTVGFVSKLPHELVEAFKSTLEEVIYSDLLCHVVDASSDNAQEEIIAVEKVLGELK 483 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGH---GIPQILE 320 A S +I+ L++ID D + L NEL + + + I+ + +LE Sbjct: 484 ALESA-----KILVLNKIDKADEEKL----NELEAKYSSIYNKVVKISARERINLDDLLE 534 Query: 321 CLHDKI 326 + +++ Sbjct: 535 AISEEL 540 >gi|154506134|ref|ZP_02042872.1| hypothetical protein RUMGNA_03676 [Ruminococcus gnavus ATCC 29149] gi|153793633|gb|EDN76053.1| hypothetical protein RUMGNA_03676 [Ruminococcus gnavus ATCC 29149] Length = 723 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 37/162 (22%), Positives = 76/162 (46%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T A + ++P T+ G KE K+ I+ D+PGI + Sbjct: 5 IALAGNPNCGKTTMFNALTGANQYVGNWPGVTVEKKEGKCKEN-KDVIVTDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ ++++V A +E N+ Q + EL + ++ L Sbjct: 64 YTLEEVVSRDYLLKEKPEAIINLVDATNIERNLYLTTQLL---------ELGIPV-VIAL 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + D ++ + ++ L + G + S++ G GI ++++ Sbjct: 114 NMADLLEKNKISIDTKALEKELGCKVVKTSALKGTGIREVVK 155 >gi|156741629|ref|YP_001431758.1| GTP-dependent nucleic acid-binding protein EngD [Roseiflexus castenholzii DSM 13941] gi|156232957|gb|ABU57740.1| GTP-binding protein YchF [Roseiflexus castenholzii DSM 13941] Length = 360 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 17/106 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA--------- 211 I IIGL N+GK+T ++T + Y L PNL VK +LA Sbjct: 3 IAIIGLANSGKTTVFNALTGDTAETTTYSSGQLTPNLATVKVPDPRLDVLARMFNPKKVT 62 Query: 212 -------DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 DI G+ A + G+ L + LLH+V A E++ Sbjct: 63 CADVQYIDIGGLSSGARESGGLPPAVLNYISGADALLHVVRAFEDD 108 >gi|148546131|ref|YP_001266233.1| GTP-binding protein EngA [Pseudomonas putida F1] gi|166225843|sp|A5VYT9|DER_PSEP1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|148510189|gb|ABQ77049.1| small GTP-binding protein [Pseudomonas putida F1] Length = 487 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 11/167 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +T+ + I D T G + FIL D GI Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGI 60 Query: 217 I-KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + ++ L E +L +V A + AA Q I + L R K I Sbjct: 61 TGDEVGMDEKMAEQSLMAIEEADYVLFLVDA-RAGMTAADQMIAEHLRK-----RNKAAI 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + ++ID +D D +AR + +P S G GI ++E + Sbjct: 115 LVANKIDNIDPD-VARAEFSPMGMGNAIPVAGSQ--GRGISALMEAV 158 >gi|322435840|ref|YP_004218052.1| GTP-binding proten HflX [Acidobacterium sp. MP5ACTX9] gi|321163567|gb|ADW69272.1| GTP-binding proten HflX [Acidobacterium sp. MP5ACTX9] Length = 467 Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 28/164 (17%) Query: 166 GLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN-AHQG 223 G NAGKST ++T A + F TL P L ++ ++ +L+D G I+N H Sbjct: 254 GYTNAGKSTLFNALTEAGVLESARMFATLDPKLRQLQLPSRRKILLSDTVGFIRNLPHTL 313 Query: 224 AGIGDRFLKHTERTHVLLHI---VSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 L+ ER +LLH+ S + E + + +L E+ A KK I L++ Sbjct: 314 VTSFRATLEEVERAEILLHVQDASSPIVEEQKMQVEKVLAEIMAA-----KKPVIEVLNK 368 Query: 281 IDTVDSDTLARKKNELATQCGQVPFE-----FSSITGHGIPQIL 319 ID L + G++P E SSI G+ ++L Sbjct: 369 ID-------------LVPERGRLPHERGAVAVSSIQKTGLEELL 399 >gi|291333501|gb|ADD93199.1| HflX family GTPase [uncultured archaeon MedDCM-OCT-S08-C282] Length = 443 Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust. Identities = 44/190 (23%), Positives = 76/190 (40%), Gaps = 41/190 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +G +G NAGKS+ ++ + D F+TL +G +++ + +LAD G I N Sbjct: 227 VGFVGYTNAGKSSLFQHLSGKPVLVEDQLFSTLETTVGRMEKSPR-ILLADTIGFIDNIP 285 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI------ 275 L + + E + A IL + S E+ +K+E Sbjct: 286 NA---------------TLAAFKATIAEALNADLTLILVDTSDSLPEVTRKLETTRREVL 330 Query: 276 -----------------VGLSQIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQ 317 V L++ID V A ++L TQ G P SS+TG G+ + Sbjct: 331 ERQEHETEGLDDDRPPYVVLTKIDKVTPAQQA-AVSDLVTQRGFPAPVALSSMTGEGVEE 389 Query: 318 ILECLHDKIF 327 + + +++F Sbjct: 390 LQHFIRERLF 399 >gi|256823051|ref|YP_003147014.1| small GTP-binding protein [Kangiella koreensis DSM 16069] gi|256796590|gb|ACV27246.1| small GTP-binding protein [Kangiella koreensis DSM 16069] Length = 467 Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 13/172 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +T+++ +A+ P T G ++FI+ D GI Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTKSRDALVANLPGLTRDRQYGQATLKGQKFIVVDTGGI 60 Query: 217 IKNAH--QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 + G G L TE +++L +V A + AA + + D L N + Sbjct: 61 AGDEEGIDGLMAGQSLLAITE-ANIVLFLVDA-RTGMTAADEFVADHLRRQNKPI----- 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 IV ++++D + +D L Q ++ G G+ +++ + D++ Sbjct: 114 IVLVNKVDGIHADAALSDYYSLGYQT---VLPLAAAHGRGVNTLVDTIFDEL 162 >gi|240146736|ref|ZP_04745337.1| ferrous iron transport protein B [Roseburia intestinalis L1-82] gi|257201114|gb|EEU99398.1| ferrous iron transport protein B [Roseburia intestinalis L1-82] gi|291538450|emb|CBL11561.1| ferrous iron transporter FeoB [Roseburia intestinalis XB6B4] Length = 730 Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 79/162 (48%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K G+K+ ++ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLK-GHKDVVIMDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R +R +L+IV + +E N+ + Q + EL + I+ + Sbjct: 64 YTLEEVVARNYLIGDRPDAILNIVDGTNIERNLYLSTQLM---------ELGIPV-IMAI 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V+ + ++L+ + G E S++ G GI + E Sbjct: 114 NMMDLVEKNGDKIHIDKLSKKLGCEVVEISALKGTGIQKAAE 155 >gi|161760697|ref|YP_253264.2| GTP-binding protein Era [Staphylococcus haemolyticus JCSC1435] gi|317374941|sp|Q4L6R7|ERA_STAHJ RecName: Full=GTPase Era Length = 299 Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 6/129 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G++ + I D PGI K Sbjct: 9 VSIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTRNDAQIIFLDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H+ R K+T + + + E + + I++ L + + + L++ Sbjct: 69 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEEIGRGDEYIMEMLKNVKTPV-----FLVLNK 123 Query: 281 IDTVDSDTL 289 ID V D L Sbjct: 124 IDLVHPDAL 132 >gi|154483368|ref|ZP_02025816.1| hypothetical protein EUBVEN_01071 [Eubacterium ventriosum ATCC 27560] gi|149735878|gb|EDM51764.1| hypothetical protein EUBVEN_01071 [Eubacterium ventriosum ATCC 27560] Length = 856 Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 14/159 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN+GK+T +T + + ++P T+ G +K G+K+ + D+PGI + Sbjct: 26 IALAGNPNSGKTTLFNGLTGSNQFVGNWPGVTVEKKEGKLK-GHKDVTITDLPGIYSLSP 84 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ V+L+IV + +E N+ + Q I EL + ++ + Sbjct: 85 YTLEEVVARNYLINEKPDVILNIVDGTNIERNLYLSTQLI---------ELGIPV-VMAV 134 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQ 317 + ID ++ +L G E S++ G GI + Sbjct: 135 NMIDIIEKSGDKISIKDLKESLGCEVVEISALKGKGIKE 173 >gi|90416482|ref|ZP_01224413.1| GTP-binding protein [marine gamma proteobacterium HTCC2207] gi|90331681|gb|EAS46909.1| GTP-binding protein [marine gamma proteobacterium HTCC2207] Length = 431 Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 10/98 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEFILADIPG 215 + + ++G NAGKST ++T+A +A+ F TL P L + ++G E + AD G Sbjct: 200 VPAVSLVGYTNAGKSTLFNNLTQADVFVANQLFATLDPTMRKLEVPEQG--EVVFADTVG 257 Query: 216 IIKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEEN 250 I +H + D F L+ +LLH+V E+ Sbjct: 258 FI--SHLPHRLVDAFRATLEEAANATLLLHVVDGAAED 293 >gi|323342097|ref|ZP_08082330.1| GTP-binding protein Era [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464522|gb|EFY09715.1| GTP-binding protein Era [Erysipelothrix rhusiopathiae ATCC 19414] Length = 298 Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 4/70 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I+G PNAGKST + + + K I + TT +G+ E + I D PGI K Sbjct: 8 ISIVGRPNAGKSTLINQIVKQKIAIVTEKAQTTRDAIIGVKTEEDYQLIFIDTPGIHKPK 67 Query: 221 HQGAGIGDRF 230 HQ +G+R Sbjct: 68 HQ---LGERM 74 >gi|117928001|ref|YP_872552.1| GTP-binding protein Era [Acidothermus cellulolyticus 11B] gi|117648464|gb|ABK52566.1| GTP-binding protein Era [Acidothermus cellulolyticus 11B] Length = 297 Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Query: 164 IIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I+G PN GKST L ++ + K I +D P TT + G+V + ++ D PG+ K Sbjct: 12 IVGRPNVGKSTLLNAMVKTKVAITSDRPQTTRHVVRGVVHRPDAQLVVVDTPGLHK 67 >gi|15614925|ref|NP_243228.1| hypothetical protein BH2362 [Bacillus halodurans C-125] gi|10174982|dbj|BAB06081.1| BH2362 [Bacillus halodurans C-125] Length = 418 Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 10/116 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 I ++G NAGKST L +T + D F TL P ++ E IL+D G I Sbjct: 204 IALVGYTNAGKSTLLNRLTASDSYEEDLLFATLDPMTRKMRLPSGMEVILSDTVGFINQL 263 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 R L+ + +LLH+V E +QA + + SEL ++E+ Sbjct: 264 PTTLVAAFRSTLEEVKHADLLLHVVDRSSEQLQAHMETV--------SELLHQLEV 311 >gi|172056862|ref|YP_001813322.1| GTP-binding protein Era [Exiguobacterium sibiricum 255-15] gi|171989383|gb|ACB60305.1| GTP-binding protein Era [Exiguobacterium sibiricum 255-15] Length = 302 Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 36/72 (50%), Gaps = 4/72 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTFL V K I +D P TT G+ + I D PGI K Sbjct: 11 VSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTDDVQTIFIDTPGIHKPK 70 Query: 221 HQGAGIGDRFLK 232 H+ +GD +K Sbjct: 71 HK---LGDFMMK 79 >gi|312962901|ref|ZP_07777388.1| GTP-binding protein EngA [Pseudomonas fluorescens WH6] gi|311282928|gb|EFQ61522.1| GTP-binding protein EngA [Pseudomonas fluorescens WH6] Length = 489 Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 11/166 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +TR + I D T G K + +I+ D GI Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI 60 Query: 217 IKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + H + ++ L E V+L +V A +A Y D++ + R K Sbjct: 61 SGDEHGMDEKMAEQSLLAIEEADVVLFLVDA-----RAGYTA-ADQMIGEHLRKRNKRSY 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 + ++ID +D + AR + +P + G GI Q+LE Sbjct: 115 LIANKIDNIDPEQ-ARAEFSPMGLGDAIP--IAGAHGRGITQMLEV 157 >gi|284989127|ref|YP_003407681.1| GTP-binding proten HflX [Geodermatophilus obscurus DSM 43160] gi|284062372|gb|ADB73310.1| GTP-binding proten HflX [Geodermatophilus obscurus DSM 43160] Length = 384 Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 15/173 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + + G NAGKS L + A + D F TL P + + + + L D G + Sbjct: 221 VPSVALTGYTNAGKSALLNRLAGADVLVQDALFATLDPTVRRTRTPDGRPYTLTDTVGFV 280 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKI 273 ++ HQ L+ ++LH+V A + A + +L E+ A R Sbjct: 281 RHLPHQLVDAFRSTLEEVVDADLVLHVVDASAPDAMDQVTAVRGVLHEIGA-----RDHP 335 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E++ L+++D LA + A VP S++TG G ++ + +++ Sbjct: 336 ELLALNKVDVAPEGWLAALR---AAYPDAVP--VSALTGEGAEELRRAIGERL 383 >gi|42820764|emb|CAF32077.1| GTP-binding protein, putative [Aspergillus fumigatus] Length = 428 Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 196 PNLGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 PN G +G + L D+ G++ AHQG G+G++FL L+H+V Sbjct: 60 PNYGSCVDGRRSVPIELLDVAGLVPGAHQGRGLGNKFLDDLRHADALIHVV 110 >gi|251779582|ref|ZP_04822502.1| ferrous iron transport protein B [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083897|gb|EES49787.1| ferrous iron transport protein B [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 714 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 IG+ G PN GK+T +T + + ++P T+ G +K KE + D+PGI + Sbjct: 5 IGLAGNPNCGKTTMFNDLTGSTQYVGNWPGVTVEKKGGKLKWN-KEVEIVDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ++ V+++IV S +E N+ Q + EL ++ L Sbjct: 64 YTLEEVVTRDFMMNDKPDVIINIVDGSNIERNLYLTTQVL--ELGIPT--------VIAL 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V + +L+ G E S+I G G +++E Sbjct: 114 NMMDIVKKNGDKINIEKLSQSLGCPIIETSAIKGDGTKKVVE 155 >gi|146278604|ref|YP_001168763.1| GTP-binding protein Era [Rhodobacter sphaeroides ATCC 17025] gi|145556845|gb|ABP71458.1| GTP-binding protein Era [Rhodobacter sphaeroides ATCC 17025] Length = 304 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 + +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 10 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGETQIVFVDTPGLFR 67 >gi|309972741|gb|ADO95942.1| GTP-binding protein EngA [Haemophilus influenzae R2846] Length = 504 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHIAGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L + ++L +V A +A ++ Y + + KI +V Sbjct: 65 EEGVEEKMAEQSLLAIDEADIVLFLVDA-----RAGLTAADIGIANYLRQRQNKITVVVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G++ + ++ G G+ Q++E Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGEIE-QIAASQGRGVTQLME 158 >gi|303252646|ref|ZP_07338809.1| GTP-binding protein EngA [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247405|ref|ZP_07529452.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648614|gb|EFL78807.1| GTP-binding protein EngA [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306856102|gb|EFM88258.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 506 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 13/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHANIAGYDFIVIDTGG-IDGT 63 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A V A D A R+K +V Sbjct: 64 EEGVEEKMAEQSLLAIEEADVVLFLVDARAGLVPA------DIGIAQYLRQREKTTVVVA 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G+V + ++ G G+ Q++E Sbjct: 118 NKTDGIDADSHCAEFYQLG--LGEVE-QIAAAQGRGVTQLIE 156 >gi|301155940|emb|CBW15410.1| predicted GTP-binding protein [Haemophilus parainfluenzae T3T1] Length = 506 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 12/176 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHANISGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A +A ++ Y + K +V Sbjct: 65 EEGVEEKMAEQSLLAIEEADVVLFLVDA-----RAGLTAADIGIANYLRQRTNKTTVVVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 ++ D +D+D+ + +L G++ + ++ G G+ Q++E + + ENE Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGEIE-QIAASQGRGVTQLMEQVLAPLAEKLQENE 172 >gi|326791286|ref|YP_004309107.1| GTP-binding proten HflX [Clostridium lentocellum DSM 5427] gi|326542050|gb|ADZ83909.1| GTP-binding proten HflX [Clostridium lentocellum DSM 5427] Length = 418 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 13/170 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 + I+G NAGKST L ++ + + + F TL P GI E +L D G I+ Sbjct: 203 VAIVGYTNAGKSTLLNQLSGSDVYVQNQLFATLDPTTRGITLPSGSEILLTDTVGFIRKL 262 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 H L+ + ++LH++ +++ Q + + LS I IV + Sbjct: 263 PHHLVKAFYSTLEEAKYADIILHVMDVSSPHLETHQQVVYETLSRLQI---SDIPIVAVY 319 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 ++IDT D K+E AT + S+ G G +L L + ++S Sbjct: 320 NKIDTHVEDY---PKDEHATYETYI----SAKEGIGCEHLLSVLEEILYS 362 >gi|227873009|ref|ZP_03991305.1| FeoB family ferrous iron (Fe2+) uptake protein [Oribacterium sinus F0268] gi|227841149|gb|EEJ51483.1| FeoB family ferrous iron (Fe2+) uptake protein [Oribacterium sinus F0268] Length = 736 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 14/159 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PNAGK+T +T + + ++P T+ G +K G+K+ ++AD+PGI + Sbjct: 5 IALAGNPNAGKTTLFNQLTGSNQYVGNWPGVTVEKKEGKLK-GHKDVVIADLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R R +L+IV + LE N+ LS EL + ++ + Sbjct: 64 YTLEEVVARNYLINNRPDAILNIVDGTNLERNLY---------LSTQLKELGIPV-VMAI 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQ 317 + +D V+ + EL G S++ G+ + Sbjct: 114 NMMDVVEKNGDVLNLEELGKAMGCKVVSISALRNKGVAE 152 >gi|221234757|ref|YP_002517193.1| GTP-binding protein hflX [Caulobacter crescentus NA1000] gi|220963929|gb|ACL95285.1| GTP-binding protein hflX [Caulobacter crescentus NA1000] Length = 446 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 18/167 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P L VK + I++D G I + Sbjct: 216 VALVGYTNAGKSTLFNRLTEAEVLAKDMLFATLDPTLRTVKLPDGRPAIMSDTVGFISDL 275 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 H+ L+ + V+LH+ V+ + QA + +L EL E + +E+ Sbjct: 276 PHELVEAFRATLEEVQEADVVLHVRDVANPDSEAQARDVETVLAELGVTLDEGKTVVEVW 335 Query: 277 G----LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 LS+ D + AR+ + A S++TG G +L Sbjct: 336 NKVDLLSEDDREIVEGQARRNDASA---------VSAVTGEGCEALL 373 >gi|150403568|ref|YP_001330862.1| ferrous iron transport protein B [Methanococcus maripaludis C7] gi|150034598|gb|ABR66711.1| ferrous iron transport protein B [Methanococcus maripaludis C7] Length = 647 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 32/55 (58%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + ++G PN GK+T +T K +I ++P T+ G K+ + +I+ D+PGI Sbjct: 7 VALLGQPNVGKTTLFNHLTGMKQRIGNWPGVTVEKKEGFFKKNNENYIVVDLPGI 61 >gi|146306508|ref|YP_001186973.1| GTP-binding protein Era [Pseudomonas mendocina ymp] gi|189037659|sp|A4XSC5|ERA_PSEMY RecName: Full=GTPase Era gi|145574709|gb|ABP84241.1| GTP-binding protein Era [Pseudomonas mendocina ymp] Length = 299 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 + I+G PN GKST L + K I P TT + LGI EG + + D PG+ K+ Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGEIQAVYVDTPGLHKH 70 >gi|14591027|ref|NP_143102.1| ferrous iron transport protein B [Pyrococcus horikoshii OT3] gi|3257622|dbj|BAA30305.1| 661aa long hypothetical ferrous iron transport protein B [Pyrococcus horikoshii OT3] Length = 661 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 17/59 (28%), Positives = 36/59 (61%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GK+T ++T + + ++P T+ GI+K +E+++ D+PGI Sbjct: 1 MLKVVALVGNPNVGKTTIFNALTGMRQHVGNWPGVTVEKKEGIMKYKGEEYLIVDLPGI 59 >gi|319892624|ref|YP_004149499.1| GTP-binding protein Era [Staphylococcus pseudintermedius HKU10-03] gi|317162320|gb|ADV05863.1| GTP-binding protein Era [Staphylococcus pseudintermedius HKU10-03] gi|323464338|gb|ADX76491.1| GTP-binding protein Era [Staphylococcus pseudintermedius ED99] Length = 298 Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 15/167 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G++ + + + D PGI K Sbjct: 9 VTIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQQDAQIVFLDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++ +V+ EE + + I++ L + + + Sbjct: 69 HK---LGDYMMKVAKNTLSEIDAVMFMVNVNEE-IGRGDEYIMEMLKTVKTPV-----FL 119 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECL 322 L++ID V D L + + S++ GH + + L Sbjct: 120 VLNKIDLVHPDALMPRIEQYQRYMDFAEIIPISALEGHNVDHFINVL 166 >gi|218780580|ref|YP_002431898.1| ferrous iron transport protein B [Desulfatibacillum alkenivorans AK-01] gi|218761964|gb|ACL04430.1| ferrous iron transport protein B [Desulfatibacillum alkenivorans AK-01] Length = 825 Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 5/105 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + + G PN GKST +VT A +A+YP T+ G K F + D+PG + + Sbjct: 8 VALAGQPNCGKSTVFNAVTGASQHVANYPGVTVDKKTGWFKHNGSRFEVVDLPGTYSLTS 67 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDEL 262 + F+ H E+ V++++ A L+ ++ ++Q + E+ Sbjct: 68 YSPEERVARDFILH-EKPAVVVNVTDASNLKRSLYLSFQLMEMEI 111 >gi|120601203|ref|YP_965603.1| small GTP-binding protein [Desulfovibrio vulgaris DP4] gi|120561432|gb|ABM27176.1| GTP-binding protein HflX [Desulfovibrio vulgaris DP4] Length = 547 Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 4/124 (3%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAH 221 ++G NAGKST L ++T A+ + F TL P ++ +E ILAD G I+N Sbjct: 334 SLVGYTNAGKSTLLNALTNAEVLAENKLFATLDPTTRRLRFPEERELILADTVGFIRNLP 393 Query: 222 QGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 + R L+ E +L+H+ A + + + D L E+ ++ L++ Sbjct: 394 KELVEAFRATLEELEAADLLIHVADAGHPELDRQLRAVEDIL--VEMEMHDIPRLLVLNK 451 Query: 281 IDTV 284 DTV Sbjct: 452 WDTV 455 >gi|83646553|ref|YP_434988.1| ferrous iron transport protein B [Hahella chejuensis KCTC 2396] gi|83634596|gb|ABC30563.1| ferrous iron transport protein B [Hahella chejuensis KCTC 2396] Length = 794 Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 23/173 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII---- 217 I ++G PN GK+T ++T +K ++ ++P T+ G +F L D+PG Sbjct: 29 IAVVGNPNCGKTTLFNALTGSKQRVGNWPGVTVERKSGRFSFQGVDFELIDLPGTYSLDV 88 Query: 218 --KNAHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKI 273 ++ I F+ E ++++IV A LE N+ C L E+ K Sbjct: 89 CEEDVSLDEQIARDFVAGRE-ADLIINIVDASNLERNLY--LTCQLLEM--------KTP 137 Query: 274 EIVGLSQIDTVDSDTLARKKNELAT--QCGQVPFEFSSITGHGIPQILECLHD 324 + L+ +D + A + LA+ C VP +S G G+PQ+ + D Sbjct: 138 LLTALNMMDVAEERGHAVAHDRLASLLDCPVVPIVAAS--GVGLPQLKAAILD 188 >gi|282165329|ref|YP_003357714.1| GTP-binding protein [Methanocella paludicola SANAE] gi|282157643|dbj|BAI62731.1| GTP-binding protein [Methanocella paludicola SANAE] Length = 420 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 15/164 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + + G NAGKST + ++ D FTTL P ++ G ++ +L D G IKN Sbjct: 193 VALAGYTNAGKSTLMNALVGETVVAKDQLFTTLVPTTRSLQIGQRKTLLTDTVGFIKNLP 252 Query: 222 QGAGIGDRFLKHTERT---HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI----E 274 F+ R+ + L V L +V + ++D+L + + +I Sbjct: 253 H-------FMVEAFRSTLEEIYLADVIILVVDVSEPPEALVDKLVTCHDTMWDEIGPVPV 305 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 I L++ D + + L +K + P S+ TG G+ ++ Sbjct: 306 ITALNKSDLITEEELEERKQAIV-HLAPHPVVISARTGEGLDEL 348 >gi|251788752|ref|YP_003003473.1| GTP-binding protein EngA [Dickeya zeae Ech1591] gi|247537373|gb|ACT05994.1| small GTP-binding protein [Dickeya zeae Ech1591] Length = 497 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGNEFIIIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I G + ++ L E ++L +V A + + A D A + R+K Sbjct: 60 IDGTEDGVETRMAEQSLLAIEEADIVLFLVDARDGLMPA------DHAIAQHLRTREKDT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + ++ID +D DT L G+V + ++ G G+ +LE Sbjct: 114 FLVANKIDGIDIDTGTADFYSLG--LGEV-YPIAASHGRGVTALLE 156 >gi|229524084|ref|ZP_04413489.1| ferrous iron transport protein B [Vibrio cholerae bv. albensis VL426] gi|229337665|gb|EEO02682.1| ferrous iron transport protein B [Vibrio cholerae bv. albensis VL426] Length = 760 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 17/166 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G EF L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYALDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH V++++V A LE ++ Q ELR+ I IV Sbjct: 68 SNSIDESIASRAVLTHPADVIINVVDATCLERSLYMTLQL---------RELRRPI-IVV 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 L+++D + + + +L G S+ + + E LH Sbjct: 118 LNKMDALKRERVHLDLKQLEAFLGCPVLALSANNKEQVRRFKEKLH 163 >gi|134300556|ref|YP_001114052.1| ferrous iron transport protein B [Desulfotomaculum reducens MI-1] gi|134053256|gb|ABO51227.1| ferrous iron transport protein B [Desulfotomaculum reducens MI-1] Length = 631 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 38/176 (21%), Positives = 80/176 (45%), Gaps = 17/176 (9%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 L ++ + G PN GKST ++T A+ I ++P T+ +G + +G K+ + D+PG Sbjct: 2 LAINVALTGNPNTGKSTIFNALTGARQHIGNWPGVTVDKKVGQITKGNKQINIIDLPG-- 59 Query: 218 KNAHQGAGIGDRFLKHT---ERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKK 272 + + +R +K E+ +++++V A +E N+ Q + EL Sbjct: 60 TYSLSAYSLEERIVKDYLVGEKPDMVVNVVDASNIERNLYLTVQLL---------ELAIP 110 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 I +V L+ +D + L+ G + + +G+ Q+++ L + + Sbjct: 111 I-VVNLNMMDDAKAKGYNINLAVLSKHLGVSVISSVATSKNGLRQLIDLLEPAVVT 165 >gi|302670578|ref|YP_003830538.1| GTP-binding protein Era [Butyrivibrio proteoclasticus B316] gi|302395051|gb|ADL33956.1| GTP-binding protein Era [Butyrivibrio proteoclasticus B316] Length = 364 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 9/164 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I +IG PN GKST + + K I ++ P TT + + + + I D PGI + Sbjct: 10 ITLIGRPNVGKSTLMNHMIGQKIAITSNKPQTTRNKIMTVYTDDDCQMIFLDTPGIHDSK 69 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 ++ + K T E V+L +V + A + I++EL + RK + I+ ++ Sbjct: 70 NKLGEYMTKVAKSTLEEVDVVLWLVEP-STFIGAGEKSIIEEL----KKCRKPV-ILVIN 123 Query: 280 QIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECL 322 +IDTV D L + +N + + +++ G I ++++ + Sbjct: 124 KIDTVSKDNLDKFENAYRQEMDFDRVVKVAALKGQNIDELMDAI 167 >gi|296136815|ref|YP_003644057.1| GTP-binding protein Era [Thiomonas intermedia K12] gi|295796937|gb|ADG31727.1| GTP-binding protein Era [Thiomonas intermedia K12] Length = 301 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPG 215 + I+G PN GKST L ++ AK I + TT + LG+ G +F D PG Sbjct: 15 VAIVGRPNVGKSTLLNALVGAKVSITSHKAQTTRHRILGVTTHGASQFAFVDTPG 69 >gi|237752720|ref|ZP_04583200.1| GTP-binding protein Era [Helicobacter winghamensis ATCC BAA-430] gi|229376209|gb|EEO26300.1| GTP-binding protein Era [Helicobacter winghamensis ATCC BAA-430] Length = 296 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 31/140 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGIIKNA 220 + ++G PNAGKSTFL ++ K + + + +V EG + + D PGI Sbjct: 10 VAVLGRPNAGKSTFLNTLLGEKLTLVSHKANATRKRMHLVLMEGETQIVFVDTPGI---- 65 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL--------DELSAYNSEL--- 269 H+ + ++++ L+E +QA C + D++S Y L Sbjct: 66 HKQEKLLNQYM---------------LKEALQALQDCDVLLFLAPASDKISYYKEFLEMA 110 Query: 270 RKKIEIVGLSQIDTVDSDTL 289 + K ++ L++ID+V + L Sbjct: 111 KDKKHLLLLTKIDSVSKEVL 130 >gi|163802527|ref|ZP_02196419.1| Fe2+ transport system protein B [Vibrio sp. AND4] gi|159173610|gb|EDP58429.1| Fe2+ transport system protein B [Vibrio sp. AND4] Length = 755 Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust. Identities = 32/137 (23%), Positives = 68/137 (49%), Gaps = 20/137 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I +G PN+GK+T +T AK ++ ++ T+ G K EF+L D+PGI + + Sbjct: 5 ILTVGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGQYKHAGDEFLLTDLPGIYSLDS 64 Query: 220 AHQGAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQ---------CILDELSAY 265 + I + TH +++++V A LE ++ Q +L+++ A Sbjct: 65 GNDSNSIDESIASRAVLTHPADLIINVVDATSLERSLYMTLQLRELGRPMIVVLNKMDA- 123 Query: 266 NSELRKKIEIVGLSQID 282 L+++ +I+ +++++ Sbjct: 124 ---LKRERQIINVAELE 137 >gi|121996843|ref|YP_001001630.1| GTP-binding protein Era [Halorhodospira halophila SL1] gi|121588248|gb|ABM60828.1| GTP-binding protein Era [Halorhodospira halophila SL1] Length = 305 Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 10/130 (7%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 ++G PN GKST L ++ K I P TT + LG++ + +L D PG+ ++A Sbjct: 19 ALVGRPNVGKSTLLNALLGEKVSIVTRKPQTTRHRILGVLNRPDAQMVLVDTPGMHQSAK 78 Query: 222 QGAGIGDRFLKH--TERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + H E V++ +V E + Q +L+ L+ ++ + IV ++ Sbjct: 79 RALNRQLNRAAHGALEDIDVVVFVVRGTE--WKEDDQRVLERLADVDAPV-----IVAVN 131 Query: 280 QIDTVDSDTL 289 Q+D V L Sbjct: 132 QVDRVQDKRL 141 >gi|88858905|ref|ZP_01133546.1| HflX, putative GTPase subunit of protease with nucleoside triP hydrolase domain [Pseudoalteromonas tunicata D2] gi|88819131|gb|EAR28945.1| HflX, putative GTPase subunit of protease with nucleoside triP hydrolase domain [Pseudoalteromonas tunicata D2] Length = 429 Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 73/178 (41%), Gaps = 11/178 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I + ++G NAGKST T + AD F TL P L I I+AD G I Sbjct: 197 IPTVSLVGYTNAGKSTLFNRATASDVYAADQLFATLDPTLRKIDVADIGSVIMADTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ H L T + LH++ +E Q + D L ++ ++ I Sbjct: 257 RHLPHDLVAAFKATLVETREADLQLHVIDVADERRQENIDQVNDVLHEIEADDVPQLLIY 316 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL----ECLHDKIFSIR 330 ++ID V+ +++ + + S+ TG G +L ECL +K+ R Sbjct: 317 --NKIDLVEELVPRIDRDD---EGKPIRIWLSAQTGVGCELLLQAISECLAEKMLKCR 369 >gi|262304253|gb|ACY44719.1| GTP-binding protein [Lepas anserifera] Length = 279 Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 10/103 (9%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H L H+ A +++ V+ + D L Sbjct: 35 VTDIAGLVKGASEGQGLGNAFLSHISACDGLYHLCRAFDDDDVTHVEGDVNPVRD-LXII 93 Query: 266 NSELRKKIEIVGLSQIDTVD-----SDTLARKKNELATQCGQV 303 N ELR K E L ID + SD A+ + E + QV Sbjct: 94 NEELRLKDEAYLLPFIDKFEKTVLRSDKKAKPEYEALMKIKQV 136 >gi|254464339|ref|ZP_05077750.1| GTP-binding proten HflX [Rhodobacterales bacterium Y4I] gi|206685247|gb|EDZ45729.1| GTP-binding proten HflX [Rhodobacterales bacterium Y4I] Length = 423 Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 11/177 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + ++G NAGKST +T A+ D F TL P + V+ E IL+D G I N Sbjct: 205 VALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVELPDGPEIILSDTVGFISNL 264 Query: 221 HQGAGIGDR-FLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 R L+ V+LH+ +S + QA + IL L E R +IE+ Sbjct: 265 PTELVAAFRATLEEVLAADVILHVRDISHHDSKQQAEDVEAILASLGV--DENRVRIEV- 321 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 +++D + + ++ + G S++TG G+ +L + +K+ +R E Sbjct: 322 -WNKLDQLPEEEAEARRQRAEREDG--IHAISALTGEGLDGLLADIAEKLQGVRHEE 375 >gi|146318969|ref|YP_001198681.1| GTPase [Streptococcus suis 05ZYH33] gi|146321179|ref|YP_001200890.1| GTPase [Streptococcus suis 98HAH33] gi|253752038|ref|YP_003025179.1| GTPase [Streptococcus suis SC84] gi|253753863|ref|YP_003027004.1| GTPase [Streptococcus suis P1/7] gi|253755261|ref|YP_003028401.1| GTPase [Streptococcus suis BM407] gi|145689775|gb|ABP90281.1| GTPase [Streptococcus suis 05ZYH33] gi|145691985|gb|ABP92490.1| GTPase [Streptococcus suis 98HAH33] gi|251816327|emb|CAZ51956.1| putative GTPase [Streptococcus suis SC84] gi|251817725|emb|CAZ55476.1| putative GTPase [Streptococcus suis BM407] gi|251820109|emb|CAR46406.1| putative GTPase [Streptococcus suis P1/7] gi|292558622|gb|ADE31623.1| putative GTP-binding protein [Streptococcus suis GZ1] gi|319758406|gb|ADV70348.1| GTPase [Streptococcus suis JS14] Length = 416 Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 2/103 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKN- 219 IG+IG NAGKST + ++T + AD F TL + K L D G I++ Sbjct: 201 IGLIGYTNAGKSTIMNAMTDKRQYEADELFATLDATTKQINLADKFNVTLTDTVGFIQDL 260 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 + L+ + +LLHI+ A + N Q +LD L Sbjct: 261 PTELISAFKSTLEESMNVDLLLHIIDASDPNHSEQEQVVLDIL 303 >gi|148553135|ref|YP_001260717.1| GTP-binding protein Era [Sphingomonas wittichii RW1] gi|148498325|gb|ABQ66579.1| GTP-binding protein Era [Sphingomonas wittichii RW1] Length = 297 Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust. Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 25/176 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGI---- 216 + ++G PNAGKST + ++ K I T L G+ G + +L D PGI Sbjct: 8 VAVVGAPNAGKSTLVNALVGQKVAIVSPKAQTTRTRLIGVAIAGESQILLVDTPGIFAPR 67 Query: 217 --IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 + A A G + ++ ++ A + + +LD L+ R++ + Sbjct: 68 RRLDRAMVAAAWGG-----AQDADLIAFVIDA-KTGITHRIGELLDTLAQ-----RREPK 116 Query: 275 IVGLSQIDTVDSDTL----ARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +V L+++D ++L R + +LA + F S+ TG G+ + + L D++ Sbjct: 117 LVVLNKVDICSKESLLELAVRLQEKLAPEA---IFMVSAATGDGVADLRQTLADRV 169 >gi|302537342|ref|ZP_07289684.1| GTP-binding protein HflX [Streptomyces sp. C] gi|302446237|gb|EFL18053.1| GTP-binding protein HflX [Streptomyces sp. C] Length = 501 Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 25/178 (14%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 I + I G NAGKS+ L +T A + + F TL P + + + + LAD G + Sbjct: 279 IPSVAIAGYTNAGKSSLLNRLTGAGVLVENALFATLDPTVRRAETPSGRVYTLADTVGFV 338 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVS----ALEENVQAAYQCILDELSAYNSELRKK 272 ++ H ++ + ++LHIV A EE + AA + ++ E+ A N Sbjct: 339 RHLPHHLVEAFRSTMEEVGDSDLILHIVDGSHPAPEEQL-AAVREVIREVGAVNVP---- 393 Query: 273 IEIVGLSQIDTVDSDTLAR----KKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EIV +++ D D L R +K+ +A S+ TG GI ++L + ++ Sbjct: 394 -EIVVINKADAADPLVLQRLLRIEKHSIA---------VSARTGQGIEELLALIDTEL 441 >gi|229845438|ref|ZP_04465568.1| GTP-binding protein EngA [Haemophilus influenzae 6P18H1] gi|229811634|gb|EEP47333.1| GTP-binding protein EngA [Haemophilus influenzae 6P18H1] Length = 504 Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHIAGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L + ++L +V A +A ++ Y + + KI +V Sbjct: 65 EEGVEEKMAEQSLLAIDEADIVLFLVDA-----RAGLTAADIGIANYLRQRQNKITVVVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G++ + ++ G G+ Q++E Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGEIE-QIAASQGRGVTQLME 158 >gi|57167682|ref|ZP_00366822.1| GTP-binding protein Era [Campylobacter coli RM2228] gi|305433189|ref|ZP_07402345.1| GTP-binding protein Era [Campylobacter coli JV20] gi|57020804|gb|EAL57468.1| GTP-binding protein Era [Campylobacter coli RM2228] gi|304443890|gb|EFM36547.1| GTP-binding protein Era [Campylobacter coli JV20] Length = 291 Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 15/140 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + IIG NAGKST + S+ K + + + IV G + I D PG+ Sbjct: 6 VSIIGRTNAGKSTLINSLLEEKIALVSHKQNATRRKIKAIVMNGEDQIIFIDTPGL---- 61 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR---KKIEIVG 277 H+ ++FL + I S + +V I D + Y + L K I+ Sbjct: 62 HESKATLNQFLIQSA-------IKSMGDCDVILFVASIFDSVKDYENFLSLNPKVPHIIV 114 Query: 278 LSQIDTVDSDTLARKKNELA 297 L+++D D+ TL +K NE A Sbjct: 115 LNKVDLADNGTLLKKLNEYA 134 >gi|312140286|ref|YP_004007622.1| gtpase [Rhodococcus equi 103S] gi|325677056|ref|ZP_08156726.1| GTP-binding protein Era [Rhodococcus equi ATCC 33707] gi|311889625|emb|CBH48942.1| putative GTPase [Rhodococcus equi 103S] gi|325552127|gb|EGD21819.1| GTP-binding protein Era [Rhodococcus equi ATCC 33707] Length = 305 Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 14/168 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 + +G PN GKST ++ K I + P TT + GIV + + IL D PG+ + Sbjct: 11 VCFVGRPNTGKSTLTNALVGEKIAITSSRPQTTRHTIRGIVHRDFAQLILVDTPGLHRPR 70 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL- 278 G + D V+ + A +E + + IL+++ ++ K ++VG+ Sbjct: 71 TLLGQRLNDLVRDTYSEVDVICLCIPA-DEKIGPGDRWILEQV----RQMAPKTKLVGIV 125 Query: 279 SQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECL 322 ++ID V D +A + L+ G +P S+++G + +++ L Sbjct: 126 TKIDKVSKDGVAAQLMALSKLLGPEAEVIP--VSAVSGEQVELLVKVL 171 >gi|255348744|ref|ZP_05380751.1| putative nucleotide-binding protein [Chlamydia trachomatis 70] gi|255503284|ref|ZP_05381674.1| putative nucleotide-binding protein [Chlamydia trachomatis 70s] Length = 447 Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 16/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I +IG N+GKST L +T A + F TL P V + +L D G I Sbjct: 226 IPTFALIGYTNSGKSTLLNLLTSADTYAENKLFATLDPKTRRCVLPCGQRVLLTDTVGFI 285 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 + H L+ + +LLH+V A E+V+ IL EL ++ Sbjct: 286 RKLPHTLVAAFKSTLEAALQEDILLHVVDASHPLALEHVETT-NAILQELGITQPQV--- 341 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I L+++D V A + ++ P S+ TG GI ++L + D + Sbjct: 342 --ITVLNKMDKVADGVTASRLRLMSPN----PVCVSAKTGEGIRELLRSMEDMV 389 >gi|223044391|ref|ZP_03614425.1| GTP-binding protein Era [Staphylococcus capitis SK14] gi|314933739|ref|ZP_07841104.1| GTP-binding protein Era [Staphylococcus caprae C87] gi|222442260|gb|EEE48371.1| GTP-binding protein Era [Staphylococcus capitis SK14] gi|313653889|gb|EFS17646.1| GTP-binding protein Era [Staphylococcus caprae C87] Length = 300 Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 6/129 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ V K I +D TT G++ + I D PGI K Sbjct: 10 VSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK 69 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H+ R K+T + + + E++ + I++ L + + + L++ Sbjct: 70 HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVKTPI-----FLVLNK 124 Query: 281 IDTVDSDTL 289 ID V D L Sbjct: 125 IDLVHPDAL 133 >gi|193213958|ref|YP_001995157.1| GTP-binding proten HflX [Chloroherpeton thalassium ATCC 35110] gi|193087435|gb|ACF12710.1| GTP-binding proten HflX [Chloroherpeton thalassium ATCC 35110] Length = 432 Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 19/139 (13%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-----KEFILADI 213 I I ++G NAGKST + ++ PK Y L+ L K+ IL+D Sbjct: 206 ITKIALVGYTNAGKSTLMNALC---PKANAYSEDRLFATLDTTTRRLHLKQNKQAILSDT 262 Query: 214 PGIIKN-AHQGAGIGDRFLKHTERTHVLLHIVS----ALEENVQAAYQCILDELSAYNSE 268 G I+ H L+ +LLH+V + EE+++ + LDE+ A N Sbjct: 263 VGFIRKLPHNLVESFKSTLEEVREADILLHVVDVSHPSFEEHIRIVDET-LDEIGAKN-- 319 Query: 269 LRKKIEIVGLSQIDTVDSD 287 K I+ L++ID ++ + Sbjct: 320 ---KQTILVLNKIDRLEQN 335 >gi|86742193|ref|YP_482593.1| small GTP-binding protein domain-containing protein [Frankia sp. CcI3] gi|86569055|gb|ABD12864.1| GTP-binding protein HflX [Frankia sp. CcI3] Length = 486 Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 17/174 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I G NAGKS+ L +T A + D F TL P + + +G + F L D G Sbjct: 267 VPSVAIAGYTNAGKSSLLNRLTGAGVLVEDALFATLDPTVRRATLPDG-RAFTLTDTVGF 325 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQ-AAYQCILDELSAYNSELRKK 272 +++ HQ L+ ++LH+V S+ E Q +A + +L+++ A Sbjct: 326 VRHLPHQIVEAFRSTLEEVADADLILHVVDGSSPEPAAQISAVREVLNDIDAGGVP---- 381 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 E++ ++++D V+ +A + Q S+ TG G+ +++ L ++ Sbjct: 382 -ELIVVNKVDAVEPTVVAGLR-----QLAPDAVFVSARTGEGLAALVDALCARV 429 >gi|304317028|ref|YP_003852173.1| GTP-binding proten HflX [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778530|gb|ADL69089.1| GTP-binding proten HflX [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 414 Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 2/99 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + I+G NAGKST + ++T + + D F TL P + +E IL D G I+ Sbjct: 202 VAIVGYTNAGKSTLMNALTDSSVYVEDKLFATLDPTARKLDLPSGREAILIDTVGFIRKL 261 Query: 221 -HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCI 258 H L+ ++ VLLH++ ++++ + + Sbjct: 262 PHDLVEAFKSTLEESKYADVLLHVIDITSKDIKHKIEVV 300 >gi|89069069|ref|ZP_01156450.1| GTP-binding protein Era [Oceanicola granulosus HTCC2516] gi|89045438|gb|EAR51503.1| GTP-binding protein Era [Oceanicola granulosus HTCC2516] Length = 301 Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 + +IG PNAGKST + AK I + T + G+ EG + +L D PG+ + Sbjct: 8 VALIGEPNAGKSTLTNRLVGAKVSIVTHKVQTTRARIRGVALEGDAQIVLVDTPGLFR 65 >gi|297183252|gb|ADI19391.1| GTPases [uncultured Spirochaetales bacterium HF0500_06B09] Length = 371 Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 ++G NAGKST + ++T A + + F TL P ++ G K +L D G ++ Sbjct: 209 ALVGYANAGKSTLMNALTGANVRAENRLFATLDPTTRRIQVGKKSLLLTDTVGFVQKLPS 268 Query: 223 GAGIGDR-FLKHTERTHVLLHIVSA 246 R L+ +L+H+V A Sbjct: 269 DLVAAFRATLEEVIEADLLIHVVDA 293 >gi|221124472|ref|XP_002165796.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 539 Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 19/137 (13%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFILADIPGIIK 218 +I +IG NAGKST ++ +A+ AD F TL + E + L+D G I+ Sbjct: 350 NISLIGYTNAGKSTLFNALVKARAYAADQLFATLDTTTRQLYLGEANRSVSLSDTVGFIR 409 Query: 219 NAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQ-----AAYQCILDELSAYNSELR 270 + G+ D F L+ +LLH+V A NV A Q +L E+ A + Sbjct: 410 DLPH--GLVDAFQATLQEAIDADLLLHVVDA--ANVDFPEQIAQVQAVLKEIGADDIP-- 463 Query: 271 KKIEIVGLSQIDTVDSD 287 +++ +++D + +D Sbjct: 464 ---QLLVFNKVDAISAD 477 >gi|157814200|gb|ABV81845.1| putative GTP-binding protein [Limulus polyphemus] Length = 273 Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 5/84 (5%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + + H+ E+ +V+ + D + Sbjct: 27 IVDIAGLVKGASEGQGLGNAFLSHIKACDAIFHLCRTFEDKEVTHVEGDINPVRD-IEII 85 Query: 266 NSELRKKIEIVGLSQIDTVDSDTL 289 N ELR K E L ID ++ L Sbjct: 86 NEELRLKDEEYILGTIDKMERTVL 109 >gi|16272103|ref|NP_438305.1| GTP-binding protein EngA [Haemophilus influenzae Rd KW20] gi|68248744|ref|YP_247856.1| GTP-binding protein EngA [Haemophilus influenzae 86-028NP] gi|260581297|ref|ZP_05849114.1| ribosome-associated GTPase EngA [Haemophilus influenzae RdAW] gi|1175159|sp|P44536|DER_HAEIN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|1573089|gb|AAC21807.1| GTP-binding protein [Haemophilus influenzae Rd KW20] gi|68056943|gb|AAX87196.1| GTP-binding protein EngA [Haemophilus influenzae 86-028NP] gi|260092046|gb|EEW75992.1| ribosome-associated GTPase EngA [Haemophilus influenzae RdAW] Length = 504 Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHIAGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L + ++L +V A +A ++ Y + + KI +V Sbjct: 65 EEGVEEKMAEQSLLAIDEADIVLFLVDA-----RAGLTAADIGIANYLRQRQNKITVVVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G++ + ++ G G+ Q++E Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGEIE-QIAASQGRGVTQLME 158 >gi|89094543|ref|ZP_01167481.1| GTP-binding protein Era [Oceanospirillum sp. MED92] gi|89081142|gb|EAR60376.1| GTP-binding protein Era [Oceanospirillum sp. MED92] Length = 311 Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 + I+G PN GKST + + K I + P TT + +GI EG + + D PG+ K+ Sbjct: 21 VAIVGRPNVGKSTLMNHILGQKLSITSKKPQTTRHQIMGIKTEGDLQIVYVDTPGLHKD 79 >gi|330993373|ref|ZP_08317308.1| GTP-binding protein era-like protein [Gluconacetobacter sp. SXCC-1] gi|329759403|gb|EGG75912.1| GTP-binding protein era-like protein [Gluconacetobacter sp. SXCC-1] Length = 305 Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 7/163 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PNAGKST L + K I TT + LGI+ + +L D PGI + Sbjct: 16 VAIVGAPNAGKSTLLNRMAGTKLSIVSPKAQTTRFRVLGILMRHGAQILLVDTPGIFQPR 75 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 + DR + T ++ L + +A L ++A +E ++++ +V L++ Sbjct: 76 RR----LDRAMVAAAWTGSDDADITLLIVDARAGMTDALRAIAARLAEQKRRLWLV-LNK 130 Query: 281 IDTVDSDTLARKKNEL-ATQCGQVPFEFSSITGHGIPQILECL 322 D V DTL EL A + F S+ +G G+ +L+ L Sbjct: 131 TDLVKRDTLLPLTAELSAILPVEHVFMVSARSGEGVDDLLDRL 173 >gi|225569770|ref|ZP_03778795.1| hypothetical protein CLOHYLEM_05864 [Clostridium hylemonae DSM 15053] gi|225161240|gb|EEG73859.1| hypothetical protein CLOHYLEM_05864 [Clostridium hylemonae DSM 15053] Length = 729 Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 14/159 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN+GK+T ++T + + ++P T+ G +K KE ++ D+PGI + Sbjct: 5 IALAGNPNSGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLKSN-KEAVIMDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R TER +L+IV + LE N+ Q + EL + ++ + Sbjct: 64 YTLEEVVARNYLITERPDAILNIVDGTNLERNLYLTTQLM---------ELGIPV-VMAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQ 317 + +D V +L + G S++ G GI + Sbjct: 114 NMMDVVKKSGDVIDTRKLGEKLGCTVVAVSALKGEGIEE 152 >gi|210613564|ref|ZP_03289758.1| hypothetical protein CLONEX_01965 [Clostridium nexile DSM 1787] gi|210151112|gb|EEA82120.1| hypothetical protein CLONEX_01965 [Clostridium nexile DSM 1787] Length = 718 Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K G+K+ I+ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLK-GHKDVIIMDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ER +++IV + +E N+ + Q + EL + I+ + Sbjct: 64 YTLEEVVARNYLIGERPDAIINIVDGTNIERNLYLSTQLM---------ELGIPV-IMAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D + + ++L+ + G E S++ G GI + E Sbjct: 114 NMVDVLQKNGDKIYTDKLSKELGCEVVEISALKGTGIQKAAE 155 >gi|218295588|ref|ZP_03496384.1| GTP-binding proten HflX [Thermus aquaticus Y51MC23] gi|218243747|gb|EED10274.1| GTP-binding proten HflX [Thermus aquaticus Y51MC23] Length = 548 Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust. Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 17/178 (9%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK----EFIL 210 K K + I I+G NAGK+T L+++ + D F TL P + + G+ E + Sbjct: 370 KRKGVPLIAIVGYTNAGKTTLLSALAKGGEPGEDKLFATLRP---LTRRGFLPGVGEVLF 426 Query: 211 ADIPGIIKNAHQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 D G I+ + R L+ +LLH++ A +E Y+ + + L E Sbjct: 427 TDTVGFIRRMPEELLTAFRATLEEVREADLLLHVLDASQEGGLERYRVVEELLEGLGVEA 486 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 + ++ LS+ D L + L S++ G G+ ++ E L + + Sbjct: 487 PR---VLALSKADRAAPYDLLYLRERLGGVA------VSALKGTGLKELREALAEALL 535 >gi|325123515|gb|ADY83038.1| GTP-binding protein [Acinetobacter calcoaceticus PHEA-2] Length = 447 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 2/90 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST + + AD F TL P L + +G +LAD G + Sbjct: 199 IPTVSLVGYTNAGKSTLFNILANSDVYAADQLFATLDPTLRRLDWDGIGTVVLADTVGFV 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA 246 +N H L+ T +LLH++ + Sbjct: 259 RNLQHDLVESFKATLEETLEATLLLHVIDS 288 >gi|290960557|ref|YP_003491739.1| GTP-binding protein [Streptomyces scabiei 87.22] gi|260650083|emb|CBG73199.1| GTP-binding protein [Streptomyces scabiei 87.22] Length = 320 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 7/149 (4%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NAHQ 222 +G PNAGKST ++ K I AD P TT + GIV + IL D PG+ K Sbjct: 27 VGRPNAGKSTLTNALVGQKVAITADQPQTTRHTVRGIVHRPDAQLILVDTPGLHKPRTLL 86 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 G + D V+ + A E + + I EL++ ++K +I +++ D Sbjct: 87 GQRLNDVVRTTWAEVDVIGFCLPA-NEKLGPGDRFIAKELAS----IKKTPKIAIVTKTD 141 Query: 283 TVDSDTLARKKNELATQCGQVPFEFSSIT 311 V+S LA + + ++ FE++ I Sbjct: 142 LVESKQLAEQLIAIDQLGKELGFEWAEIV 170 >gi|255533658|ref|YP_003094030.1| GTP-binding protein Era [Pedobacter heparinus DSM 2366] gi|255346642|gb|ACU05968.1| GTP-binding protein Era [Pedobacter heparinus DSM 2366] Length = 295 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + IIG PN GKST + ++ K I TT + LGIV E + + +D PGIIK Sbjct: 8 VSIIGKPNVGKSTLMNALVGEKLSIITPKAQTTRHRILGIVNEESYQIVFSDTPGIIK 65 >gi|163786791|ref|ZP_02181239.1| hypothetical protein FBALC1_16437 [Flavobacteriales bacterium ALC-1] gi|159878651|gb|EDP72707.1| hypothetical protein FBALC1_16437 [Flavobacteriales bacterium ALC-1] Length = 403 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 11/131 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + ++G N GKST + ++++K + F TL + V G F+++D G I+ Sbjct: 202 VALVGYTNVGKSTLMNVISKSKVFAENKLFATLDTTVRKVVIGNLPFLVSDTVGFIRKLP 261 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV----SALEENVQAAYQCILDELSAYNSELRKKIEIV 276 Q L +LLH+V S EE++ + Q ILDE+ E + K I+ Sbjct: 262 TQLVESFKSTLDEVREADLLLHVVDISHSNFEEHIDSVNQ-ILDEI-----ESKDKPTIM 315 Query: 277 GLSQIDTVDSD 287 ++ID +++ Sbjct: 316 VFNKIDAYEAE 326 >gi|310659078|ref|YP_003936799.1| GTP-binding protein era [Clostridium sticklandii DSM 519] gi|308825856|emb|CBH21894.1| GTP-binding protein Era [Clostridium sticklandii] Length = 305 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 8/88 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + S+ K I +D P TT I + + + D PGI K Sbjct: 16 VSIIGRPNVGKSTLMNSLVGEKIAIMSDKPQTTRNQIRAIYNDDEMQIVFMDTPGIQKPQ 75 Query: 221 HQGAGIGDRFLK--HTER--THVLLHIV 244 ++ +GD LK H+ T V+L +V Sbjct: 76 NR---LGDYMLKVSHSSMRDTDVILFVV 100 >gi|302800566|ref|XP_002982040.1| hypothetical protein SELMODRAFT_115965 [Selaginella moellendorffii] gi|300150056|gb|EFJ16708.1| hypothetical protein SELMODRAFT_115965 [Selaginella moellendorffii] Length = 387 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 33/194 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGI---- 216 +GIIG PNAGKS+ L + K ++ TT LG++ E + + D PG+ Sbjct: 87 VGIIGAPNAGKSSLLNFLVGTKVSAVSRKTNTTRNEILGVLTENDTQVLFYDTPGLMMRW 146 Query: 217 --------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 +K+ Q A + H E VL+ +E Q + I ++L Sbjct: 147 KGQAVRRDVKSRVQSAWM---VTGHCEVLIVLVDAHRQIERPDQRVRKLI-EKLGEKKDP 202 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNE---LATQCGQVP-----FEFSSITGHGIPQILE 320 +K+ I+ L+++D L R+K E LA + G +P F S + G G+ + E Sbjct: 203 KQKR--ILCLNKVD------LIRQKRELVPLAQEFGSLPGYDRVFMISGLRGSGVRHLKE 254 Query: 321 CLHDKIFSIRGENE 334 L +K E E Sbjct: 255 YLLEKAVPRPWEEE 268 >gi|291562528|emb|CBL41344.1| ferrous iron transporter FeoB [butyrate-producing bacterium SS3/4] Length = 665 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 13/146 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 + +G PN GK+T + T AK K+A++P T+ G ++ + D PGI + Sbjct: 10 VCFVGNPNCGKTTLFNAFTGAKLKVANWPGVTVERMEGETSYKGRKIRVIDTPGIYSLTS 69 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R + V++++V S+LE N+ Q + EL+K + I+ L Sbjct: 70 YTMEELVTRRCIEEDGVDVIVNVVDASSLERNLYLTMQLL---------ELKKPV-ILAL 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVP 304 + +D ++ + + L G +P Sbjct: 120 NMMDIIEERGMEIDLHRLPEMLGGIP 145 >gi|262304195|gb|ACY44690.1| GTP-binding protein [Aphonopelma chalcodes] Length = 280 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 3/83 (3%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDELSAYN 266 + DI G++K A++G G+G+ FL H + H+ E ENV + + +L + Sbjct: 35 VVDIAGLVKGANEGQGLGNAFLSHIRACDAIFHLCRCFEDENVSHVEGEVNPVRDLEIIS 94 Query: 267 SELRKKIEIVGLSQIDTVDSDTL 289 ELR K E L+ +D ++ L Sbjct: 95 EELRLKDEDYMLTLLDKLERTVL 117 >gi|253996789|ref|YP_003048853.1| GTP-binding proten HflX [Methylotenera mobilis JLW8] gi|253983468|gb|ACT48326.1| GTP-binding proten HflX [Methylotenera mobilis JLW8] Length = 447 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 39/179 (21%), Positives = 76/179 (42%), Gaps = 8/179 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 +A + ++G NAGKST + ++T ++ +A+ F TL + + E +++D G I Sbjct: 221 LAGVALVGYTNAGKSTLMRALTGSEVLVANKLFATLDTTVRALYPESIPRILVSDTVGFI 280 Query: 218 KNAHQG-AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 KN G L +LLH++ A + + + + L+ ++ +I + Sbjct: 281 KNLPHGLVASFKSTLDEALDASLLLHVIDASDSGFERQLEVTNEVLAEIGADDVPRIRV- 339 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 ++ID V D T Q + + P + LH KI +I +++ Sbjct: 340 -FNKIDYVGDDA----AQAALTLTLQSRYPDCVVMSAKRPDDVAQLHQKIVAIYQQDQI 393 >gi|227833628|ref|YP_002835335.1| putative GTP-binding protein [Corynebacterium aurimucosum ATCC 700975] gi|227454644|gb|ACP33397.1| putative GTP-binding protein [Corynebacterium aurimucosum ATCC 700975] Length = 386 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + +G PN GKST ++ K I AD P TT +P G+V + +L D PG+ Sbjct: 93 VSFVGRPNTGKSTLTNALVGQKIAITADQPETTRHPIRGLVHREDAQIVLVDTPGL 148 >gi|254467815|ref|ZP_05081221.1| ferrous iron transport protein B [beta proteobacterium KB13] gi|207086625|gb|EDZ63908.1| ferrous iron transport protein B [beta proteobacterium KB13] Length = 574 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 16/89 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------LADIPG 215 I +IG+PN+GKSTF S++ A +IA++ T + E + FI L D+PG Sbjct: 4 IALIGMPNSGKSTFFNSISGASARIANWSGVT------VDIESVRTFIFGEIVELIDLPG 57 Query: 216 IIKNAHQGAG---IGDRFLKHTERTHVLL 241 I + H G+ + FLK+ + + Sbjct: 58 -IYSLHSGSDDEVVVHEFLKNNQINEIFF 85 >gi|32474584|ref|NP_867578.1| GTP-binding protein Hflx [Rhodopirellula baltica SH 1] gi|32445123|emb|CAD75125.1| GTP-binding protein Hflx [Rhodopirellula baltica SH 1] Length = 459 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 26/138 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL--------YPNLGIVKEGYKEFILADI 213 + ++G NAGKST + ++T A D F TL P G V +L+D Sbjct: 204 VSLVGYTNAGKSTLMNALTDAGVMAQDKLFATLDTRTRRWHLPEWGHV-------LLSDT 256 Query: 214 PGIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSE 268 G I++ H L+ T + +LLH+ A + E + A YQ +L+EL Sbjct: 257 VGFIRDLPHSLVASFKSTLEETRQAELLLHVADASSSQVFEQISAVYQ-VLEELG----- 310 Query: 269 LRKKIEIVGLSQIDTVDS 286 + K ++ L++ID + S Sbjct: 311 IEAKDTLLVLNKIDAITS 328 >gi|332532634|ref|ZP_08408510.1| GTP-binding protein Era [Pseudoalteromonas haloplanktis ANT/505] gi|332037850|gb|EGI74299.1| GTP-binding protein Era [Pseudoalteromonas haloplanktis ANT/505] Length = 310 Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +GI EG + + D PG+ Sbjct: 21 VAIVGRPNVGKSTLLNEIIEQKVSITSRKPQTTRHRIMGIHTEGKHQAVYIDTPGL 76 >gi|149374708|ref|ZP_01892482.1| GTP-binding protein Era [Marinobacter algicola DG893] gi|149361411|gb|EDM49861.1| GTP-binding protein Era [Marinobacter algicola DG893] Length = 305 Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 22/145 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ + Sbjct: 17 VAIVGRPNVGKSTLLNHILGQKLSITSRKPQTTRHQVLGIKTEGPVQAIYVDTPGMHEEE 76 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY----QCILDELSAYNSELRKKIEIV 276 + +R++ T L + A+ Q A+ + +L++LS+ + I+ Sbjct: 77 PRAI---NRYMNKAA-TSALKDVDVAVFVVDQMAWTTADEMVLEKLSSLKCPV-----IL 127 Query: 277 GLSQIDTVDS--------DTLARKK 293 ++++D +++ D L+RK+ Sbjct: 128 AVNKVDRIENREALLPHLDMLSRKR 152 >gi|92113404|ref|YP_573332.1| GTP-binding protein, HSR1-related [Chromohalobacter salexigens DSM 3043] gi|91796494|gb|ABE58633.1| GTP-binding protein HflX [Chromohalobacter salexigens DSM 3043] Length = 439 Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST ++T ++ AD F TL P L + +LAD G I Sbjct: 198 IPSVSLVGYTNAGKSTLFNALTESEVYAADQLFATLDPTLRRLNVADVGPVVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSA 264 ++ H+ L+ +L+H++ A + + A +L+E+ A Sbjct: 258 RHLPHKLVESFRATLQEAAEASLLVHVIDAADPDRDFNVAQVDTVLEEIGA 308 >gi|325855172|ref|ZP_08171795.1| ribosome biogenesis GTPase Era [Prevotella denticola CRIS 18C-A] gi|325483909|gb|EGC86853.1| ribosome biogenesis GTPase Era [Prevotella denticola CRIS 18C-A] Length = 293 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 8/92 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + + K IA + TT + +GIV + + +D PG++K Sbjct: 7 VNIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTDDSQIVFSDTPGVLKPN 66 Query: 221 HQGAGIGDRFLKHTER----THVLLHIVSALE 248 ++ + + L+ +E VLL++ +E Sbjct: 67 YK---MQEMMLQFSESALADADVLLYVTDVVE 95 >gi|325971939|ref|YP_004248130.1| GTP-binding proten HflX [Spirochaeta sp. Buddy] gi|324027177|gb|ADY13936.1| GTP-binding proten HflX [Spirochaeta sp. Buddy] Length = 440 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 28/177 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN-A 220 I+G N+GKS+ L ++T A + D F TL P +VK G +E +L+D G I + Sbjct: 223 AIVGYTNSGKSSLLNALTNAGVLVEDKLFATLDPTTRLVKLPGGEEILLSDTVGFISDLP 282 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNSELRKKIEIVG 277 H L+ + L+ + A ++ A Y +L+EL + K IV Sbjct: 283 HNLVDAFKSTLEEAKYADFLIIVCDASHPDMLANYATTVQVLEELGCTD-----KPAIVL 337 Query: 278 LSQIDTV-DSDTLARKK-----------------NELATQCGQVPFEFSSITGHGIP 316 +++D V D+ ++R K + L TQ G E + T + +P Sbjct: 338 ANKMDKVEDAFAVSRLKSMYNPVLETSIKTGEGLDALLTQIGITLHELCATTTYLLP 394 >gi|317484543|ref|ZP_07943451.1| ferrous iron transporter B [Bilophila wadsworthia 3_1_6] gi|316924204|gb|EFV45382.1| ferrous iron transporter B [Bilophila wadsworthia 3_1_6] Length = 731 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 14/175 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI-LADIPGIIK-N 219 I + G PN+GK+T ++T + + +YP T+ G +K + D+PG Sbjct: 7 IALAGNPNSGKTTAFNALTGSHQHVGNYPGITVEKKEGFIKMPSGRCVRFIDLPGTYSLT 66 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVS--ALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 A+ R + ER V++ +++ ALE N+ Q + EL + ++ Sbjct: 67 AYTQEETVARHVLAQERPDVVIDVLNAGALERNLYLTIQLL---------ELGVPV-VLA 116 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 L+ +D + L+ + G + TG G+P++L+ I + RGE Sbjct: 117 LNMMDEAAKQGMTIDIERLSQRLGFPVMATVARTGEGLPELLKATEAYIETKRGE 171 >gi|268315826|ref|YP_003289545.1| GTP-binding protein Era [Rhodothermus marinus DSM 4252] gi|262333360|gb|ACY47157.1| GTP-binding protein Era [Rhodothermus marinus DSM 4252] Length = 311 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 24/172 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + ++ K I P TT + LGI+ + + D PG++K A Sbjct: 28 VAIVGKPNVGKSTLMNALLGHKLSIVTPKPQTTRHRVLGILSGDTYQIVFLDTPGVLKKA 87 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 + + L+ +R +V + E Q A I L + I+ L++ Sbjct: 88 R--YKLHEHMLRTVDRAVADADLVLFMAEATQKAPDTI------SLGHLGNRPAILALNK 139 Query: 281 IDTVDSDTLARKKNELA----TQCGQVPFE----FSSITGHGIPQIL-ECLH 323 +D L R + ++ Q PFE S++TG+ + +L E +H Sbjct: 140 MD------LVRNQEQVLPLVDAYMKQYPFEAVVPISALTGYNLDVLLKEIIH 185 >gi|254445298|ref|ZP_05058774.1| ferrous iron transport protein B [Verrucomicrobiae bacterium DG1235] gi|198259606|gb|EDY83914.1| ferrous iron transport protein B [Verrucomicrobiae bacterium DG1235] Length = 740 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 12/108 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + I ++G PN GKST +T + K+ +YP T+ +G + G + D+PG Sbjct: 12 LTRIALLGNPNTGKSTLFNCLTGLRQKVGNYPGVTVQRKVGRMFFGKNVAEVIDLPGTYS 71 Query: 219 NAHQG--------AGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQ 256 A A +G+ ++ ER ++L IV A L+ N+ AYQ Sbjct: 72 LAADSPDERVVVDALLGE--METVERPDLVLCIVDATNLQRNLFLAYQ 117 >gi|188997363|ref|YP_001931614.1| small GTP-binding protein [Sulfurihydrogenibium sp. YO3AOP1] gi|229807528|sp|B2V5W6|DER_SULSY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|188932430|gb|ACD67060.1| small GTP-binding protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 445 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 15/170 (8%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PNAGKS+ + A + + +++ P TT + ++ ++F+ D G+ K + Sbjct: 184 VAIVGKPNAGKSSLINALLNEERVLVSEIPGTTRDTVDILYEKDGQKFLFLDTAGMRKKS 243 Query: 221 HQGAGIG----DRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 G+ R ++ E+ V++ ++ A N A Q D A + R K ++ Sbjct: 244 KVDFGLEFFSVGRTIEAIEKADVVVLVIDA---NQGATEQ---DTKIAGLIQRRYKPAVI 297 Query: 277 GLSQIDTVDSDTLARKKNELATQC---GQVPFEFSSI-TGHGIPQILECL 322 +++IDTVD TL + + ++ + P F+S T G+ ++LE + Sbjct: 298 VINKIDTVDKKTLEKVEKQVRERLYFISYAPIVFTSAKTKEGLDELLEKI 347 >gi|10177528|dbj|BAB10923.1| GTP-binding protein-like [Arabidopsis thaliana] Length = 353 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I + ++G+PN GKST + K I D P TT + LGI + IL D PG+I Sbjct: 55 IGYVAVVGMPNVGKSTLSNQMIGQKISIVTDKPQTTRHRILGICSSPEYQMILYDTPGVI 114 Query: 218 -KNAHQ 222 K H+ Sbjct: 115 EKKMHR 120 >gi|317506468|ref|ZP_07964269.1| GTP-binding protein HflX [Segniliparus rugosus ATCC BAA-974] gi|316255229|gb|EFV14498.1| GTP-binding protein HflX [Segniliparus rugosus ATCC BAA-974] Length = 477 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 23/181 (12%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE----FILADIPGIIKN 219 I+G NAGKS+ L ++T A I D F TL P ++ + E F + D G ++ Sbjct: 254 IVGYTNAGKSSLLGALTGASVIIRDELFATLDPT---TRKSWGEAAGAFTITDTVGFVR- 309 Query: 220 AHQGAGIGDRF---LKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 H + + F L+ VL+HIV A + + V+ + + D + + Sbjct: 310 -HLPTQLVEAFASTLEEATGADVLVHIVDASDPRPTDQVRVVREILGDVFAKAGAPW--P 366 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 EIV L++ D VD LA ++ S+ TG GI ++ + + + + GE Sbjct: 367 PEIVALNKTDLVDEVDLAALRSAFPDA-----LLVSARTGKGIEELKSRIGEALAAKSGE 421 Query: 333 N 333 Sbjct: 422 R 422 >gi|227810125|ref|ZP_03989038.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226904705|gb|EEH90623.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 687 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 3/92 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 IG IG PN GK+T + T A K+A++P T+ G ++ L D+PG + Sbjct: 10 IGFIGNPNCGKTTLFNAYTGANLKVANWPGVTVEKVEGAIRHHNMNIRLVDLPGTYSLTS 69 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEEN 250 + I R ++ V++++V SALE + Sbjct: 70 YTMEEIVSRKFILSDEVDVVINVVDASALERS 101 >gi|209884976|ref|YP_002288833.1| GTP-binding protein Era [Oligotropha carboxidovorans OM5] gi|226741225|sp|B6JGG2|ERA_OLICO RecName: Full=GTPase Era gi|209873172|gb|ACI92968.1| GTP-binding protein Era [Oligotropha carboxidovorans OM5] Length = 308 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 33/176 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGI---- 216 + +IG PN GKST + ++ +K I T + GIV EG + +L D PGI Sbjct: 18 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVVEGNAQIVLVDTPGIFTPK 77 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 + A GA D VLL + L+E +A + + E Sbjct: 78 RRLDRAMVSTAWSGAHDADMVC-------VLLDARAGLDEEAEAIFTKL---------EA 121 Query: 270 RKKIEIVGLSQIDTVDSD---TLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 K + + +++ID V + LA++ NE + F ++++G G+ + L Sbjct: 122 VKHPKFLVINKIDLVAREKLLALAQRANERI--AFRETFMVAALSGDGVDDLRRAL 175 >gi|117618716|ref|YP_857251.1| ferrous iron transport protein B [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560123|gb|ABK37071.1| ferrous iron transport protein B [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 757 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 68/132 (51%), Gaps = 10/132 (7%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGA 224 +G PN+GK++ ++T A+ ++ ++ T+ +G ++ L D+PGI A+Q Sbjct: 8 VGNPNSGKTSLFNALTGARQQVGNWSGVTVDKKMGEFSAQGHDYKLMDLPGIYSLANQEG 67 Query: 225 G----IGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 I RF++ ++ +LL+++ A LE ++ Q L EL + K++I+ Sbjct: 68 SLDEQIASRFVE-GQQPDLLLNVIDAANLERSLYLTLQ--LRELGLPMVVVLNKMDILQK 124 Query: 279 SQIDTVDSDTLA 290 +I T+D LA Sbjct: 125 RRI-TIDESKLA 135 >gi|326510903|dbj|BAJ91799.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 527 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 21/176 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I + ++G NAGKST L +T A D F TL P ++ + EF+L D G I Sbjct: 327 IPVVSLVGYTNAGKSTLLNRLTGADVLAEDKLFATLDPTTRRVLMKSGTEFLLTDTVGFI 386 Query: 218 KNAHQGAGIGDR-FLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKI 273 + R L+ + +++H+V + Q A +L EL ++ Sbjct: 387 QKLPTMLVAAFRATLEEISESSIIVHLVDISHQLAQQQIGAVDKVLKEL-----DIDSVP 441 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQ---CGQVPFEFSSITGHGIPQILECLHDKI 326 ++V ++ID ++D R K E A Q C S++ G G+ ++ + K+ Sbjct: 442 KLVVWNKID--NTDNPLRVKEEAAKQGIIC------ISAMNGDGLEELCNAIQAKL 489 >gi|312190415|gb|ADQ43214.1| GTP binding protein [Eutrema parvulum] Length = 426 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGII-KN 219 + ++G+PN GKST + K I D P TT + LGI + IL D PG+I K Sbjct: 131 VAVVGMPNVGKSTLSNQMIGQKISIVTDKPQTTRHRILGICSSPEYQMILFDTPGVIEKK 190 Query: 220 AHQ 222 H+ Sbjct: 191 MHR 193 >gi|260886788|ref|ZP_05898051.1| GTP-binding protein Era [Selenomonas sputigena ATCC 35185] gi|330839400|ref|YP_004413980.1| GTP-binding protein Era [Selenomonas sputigena ATCC 35185] gi|260863387|gb|EEX77887.1| GTP-binding protein Era [Selenomonas sputigena ATCC 35185] gi|329747164|gb|AEC00521.1| GTP-binding protein Era [Selenomonas sputigena ATCC 35185] Length = 297 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 4/77 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST + S+ K I +D P TT L I+ E + + D PGI K Sbjct: 11 IAVVGRPNVGKSTLINSLIGQKIVIMSDKPQTTRTRILCILTEPDAQIVFLDTPGIHKPR 70 Query: 221 HQGAGIGDRFLKHTERT 237 H +G+ ++ E T Sbjct: 71 HT---LGEYMVRAAEST 84 >gi|254503598|ref|ZP_05115749.1| GTP-binding protein Era [Labrenzia alexandrii DFL-11] gi|222439669|gb|EEE46348.1| GTP-binding protein Era [Labrenzia alexandrii DFL-11] Length = 337 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST + + K I + TT G+ G + + D PGI K Sbjct: 48 VALIGAPNAGKSTLINQLVGTKVSIVTHKVQTTRSIVRGVAMHGTAQLVFIDTPGIFKPK 107 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + DR + T R ++ ++ + + + IL L ++ +++ Sbjct: 108 RR----LDRAMVDTAWGGARDADVIALLIDARKGIDEEVEQILKRLKGQSAP-----KVL 158 Query: 277 GLSQIDTVDSD---TLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L++ D + + LA+K NE + F S++TG G QIL+ K+ Sbjct: 159 ILNKTDVANREKLLKLAQKANEYLE--FEETFMVSALTGDGTQQILDYFASKM 209 >gi|160893981|ref|ZP_02074760.1| hypothetical protein CLOL250_01536 [Clostridium sp. L2-50] gi|156864359|gb|EDO57790.1| hypothetical protein CLOL250_01536 [Clostridium sp. L2-50] Length = 782 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 35/165 (21%), Positives = 75/165 (45%), Gaps = 14/165 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I ++G N GK+T +T + + ++P T+ G++K GY + + D+PG+ Sbjct: 117 ILTFALVGNQNCGKTTLFNQLTGSNQHVGNFPGVTVDRKEGMIK-GYPDTRVTDLPGVYS 175 Query: 219 -NAHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEI 275 + + I R E+ +++IV A +E N+ Q + ++ + Sbjct: 176 LSPYSSEEIVTRQFVFDEKPKGIINIVDATNIERNLYLTMQLMELDIPM----------V 225 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + L+ +D V + + + N+L + G S+I G+ +++E Sbjct: 226 LALNMMDEVRENGGSIRINQLESMLGIPVIPISAIKNQGVDELIE 270 >gi|119502793|ref|ZP_01624878.1| probable GTP-binding protein [marine gamma proteobacterium HTCC2080] gi|119461139|gb|EAW42229.1| probable GTP-binding protein [marine gamma proteobacterium HTCC2080] Length = 405 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 16/171 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKN- 219 + I+G NAGKST A AD F TL P L V+ + + +LAD G I + Sbjct: 188 VSIVGYTNAGKSTLFNRYASADVYAADQLFATLDPTLRRVEIPHLGDVVLADTVGFISDL 247 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKKIEIV 276 H L+ T +L+H++ E + +L E+ A + + + Sbjct: 248 PHTLIDAFKATLEETLNADLLIHVIDVSADQREYWMSEVDLVLSEIGAGDVPM-----LC 302 Query: 277 GLSQIDTVDSD-TLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++D ++ + R + L T S+ TG G+P + E L +++ Sbjct: 303 VFNKLDLLEQQPRIVRNEEGLPTAV-----YLSARTGEGLPLLEEALRERL 348 >gi|51891672|ref|YP_074363.1| Era family GTP-binding protein [Symbiobacterium thermophilum IAM 14863] gi|51855361|dbj|BAD39519.1| Era family GTP-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 316 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I+G PN GKST L + AK I +D P TT LG+ + + D PGI K H Sbjct: 12 SIVGRPNVGKSTLLNAFVAAKLAIMSDKPQTTRNRILGVYNRPDAQVVFLDTPGIHKPRH 71 Query: 222 Q 222 + Sbjct: 72 R 72 >gi|320529427|ref|ZP_08030515.1| GTP-binding protein Era [Selenomonas artemidis F0399] gi|320138393|gb|EFW30287.1| GTP-binding protein Era [Selenomonas artemidis F0399] Length = 298 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 4/74 (5%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +IG PNAGKST + ++ K I +D P TT L I+ + + I D PG+ K H Sbjct: 10 AVIGRPNAGKSTLINALIGQKIAIMSDKPQTTRSRILCILTQEDAQVIFLDTPGVHKPKH 69 Query: 222 QGAGIGDRFLKHTE 235 + +G K TE Sbjct: 70 K---LGSHMAKATE 80 >gi|319408442|emb|CBI82097.1| GTP-binding protein HflX [Bartonella schoenbuchensis R1] Length = 453 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 14/166 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFILADIPGIIKN 219 + ++G NAGKST ++ A D F TL P L I+ G F L+D G I N Sbjct: 220 VALVGYTNAGKSTLFNRLSDAGVLTKDMLFATLDPTLRKVILPHGQTIF-LSDTVGFISN 278 Query: 220 --AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 H A L+ +++H+ + + +A Q +L+ LS+ ++ IV Sbjct: 279 LPTHLIAAFRAT-LEEVIEADLIIHVKDISDPDHRAQAQDVLEILSSLGVDIGNTDRIVE 337 Query: 278 L-SQIDTVDSDTLARKKNELATQCGQV---PFEFSSITGHGIPQIL 319 + ++ D +D TL N L T + S++TG G+ Q+L Sbjct: 338 VWNKADMLDEHTL----NVLQTSARTLLNPALMISALTGEGLNQLL 379 >gi|327312577|ref|YP_004328014.1| ribosome biogenesis GTPase Era [Prevotella denticola F0289] gi|326944896|gb|AEA20781.1| ribosome biogenesis GTPase Era [Prevotella denticola F0289] Length = 293 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 8/92 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + + K IA + TT + +GIV + + +D PG++K Sbjct: 7 VNIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTDDSQIVFSDTPGVLKPN 66 Query: 221 HQGAGIGDRFLKHTER----THVLLHIVSALE 248 ++ + + L+ +E VLL++ +E Sbjct: 67 YK---MQEMMLQFSESALADADVLLYVTDVVE 95 >gi|307564581|ref|ZP_07627121.1| GTP-binding protein Era [Prevotella amnii CRIS 21A-A] gi|307346739|gb|EFN92036.1| GTP-binding protein Era [Prevotella amnii CRIS 21A-A] Length = 293 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 8/93 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + + K IA + TT + +GIV + + +D PG++K Sbjct: 7 VNIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTDNAQIVFSDTPGVLKPN 66 Query: 221 HQGAGIGDRFLKHTER----THVLLHIVSALEE 249 ++ + + L+ +E +LL++ +E+ Sbjct: 67 YK---MQEMMLQFSESALADADILLYVTDVVED 96 >gi|291407513|ref|XP_002720068.1| PREDICTED: guanine nucleotide binding protein-like 3 (nucleolar)-like isoform 2 [Oryctolagus cuniculus] Length = 589 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 12/106 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGYKEFI-LADIPGIIKN 219 +G++GLPN GKS+ + S+ R++ + P T + + + +FI L D PGI+ Sbjct: 262 VGVVGLPNVGKSSLINSLKRSRACSVGAVPGVTKF----MQEVHLDKFIRLLDAPGIVPG 317 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + G R H ++ L V+ +E +Q +C L+E+S+Y Sbjct: 318 PNSEVGTILRNCIHVQQ---LADPVTPVETILQ---RCNLEEISSY 357 >gi|258626230|ref|ZP_05721078.1| Ferrous iron transport protein B [Vibrio mimicus VM603] gi|258581585|gb|EEW06486.1| Ferrous iron transport protein B [Vibrio mimicus VM603] Length = 188 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 17/166 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G EF+L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGSFTHAGDEFLLTDLPGIYALDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH +++++V A LE ++ Q EL++ + IV Sbjct: 68 TNSIDESIASRAVLTHPTDLIINVVDATCLERSLYMTLQL---------RELQRPM-IVV 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 L+++D + + + +L + G S+ + + + E LH Sbjct: 118 LNKMDVLKRERVHVDIKQLESFLGCPVLALSANSKEQVRRFKEKLH 163 >gi|78499699|gb|ABB45853.1| hypothetical protein [Eutrema halophilum] Length = 429 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGII-KN 219 + ++G+PN GKST + K I D P TT + LGI + IL D PG+I K Sbjct: 134 VAVLGMPNVGKSTLSNQMIGQKISIVTDKPQTTRHRILGICSSPEYQMILYDTPGVIEKK 193 Query: 220 AHQ 222 H+ Sbjct: 194 MHR 196 >gi|51892817|ref|YP_075508.1| GTP-binding protein [Symbiobacterium thermophilum IAM 14863] gi|81826113|sp|Q67NS9|DER_SYMTH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|51856506|dbj|BAD40664.1| GTP-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 471 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 5/90 (5%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PN GKS+ + ++ + ++D P TT +V+ G +F+L D G+ + A Sbjct: 180 VAVIGRPNVGKSSLVNAILGEERVIVSDVPGTTRDAIDVLVERGEDKFLLIDTAGMRRKA 239 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSA 246 + R L+ ER V+L ++ A Sbjct: 240 RVEEAVERYSVMRALRAVERAQVVLIVIDA 269 >gi|292489043|ref|YP_003531930.1| GTP-binding protein engA [Erwinia amylovora CFBP1430] gi|292900172|ref|YP_003539541.1| GTP-binding protein [Erwinia amylovora ATCC 49946] gi|291200020|emb|CBJ47145.1| GTP-binding protein [Erwinia amylovora ATCC 49946] gi|291554477|emb|CBA22001.1| GTP-binding protein engA [Erwinia amylovora CFBP1430] Length = 499 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 8/133 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G + +EFI D GI Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60 Query: 217 IKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 N + ++ L E V+L +V A + A I L A R+K Sbjct: 61 DGNEEGVETRMAEQSLLAIEEADVVLFMVDA-RAGLMPADTAIAKHLRA-----RQKPTF 114 Query: 276 VGLSQIDTVDSDT 288 + ++ D +D+D+ Sbjct: 115 IVANKTDGLDADS 127 >gi|332159381|ref|YP_004424660.1| ferrous iron transport protein b - like protein [Pyrococcus sp. NA2] gi|331034844|gb|AEC52656.1| ferrous iron transport protein b - like protein [Pyrococcus sp. NA2] Length = 661 Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust. Identities = 17/59 (28%), Positives = 36/59 (61%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GK+T ++T + + ++P T+ GI++ KE+++ D+PGI Sbjct: 1 MLKVVALVGNPNVGKTTIFNALTGMRQHVGNWPGVTVEKKEGILEYKGKEYLVVDLPGI 59 >gi|317181837|dbj|BAJ59621.1| GTP-binding protein Era [Helicobacter pylori F57] Length = 301 Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 25/173 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYK-EFILADIPG 215 + +IG PNAGKST L ++ A + + + + KEGY+ + I D PG Sbjct: 8 VALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPG 67 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS--ELRKKI 273 + HQ + L L + E V A + D+L Y L +K Sbjct: 68 L---HHQEKLLNQCMLSQA------LKAMGDAELCVFLA--SVHDDLKGYEEFLSLYQKP 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECL 322 I+ LS+IDT + +K E Q VP S+ + +LEC+ Sbjct: 117 HILALSKIDTATHKQVLQKLQEYQQYASQFLALVP--LSAKKSQNLNALLECI 167 >gi|255280317|ref|ZP_05344872.1| GTP-binding protein HflX [Bryantella formatexigens DSM 14469] gi|255269408|gb|EET62613.1| GTP-binding protein HflX [Bryantella formatexigens DSM 14469] Length = 415 Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 4/97 (4%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN-A 220 I+G NAGKST L ++T ++ D F TL P +++ +E +L D G I+ Sbjct: 204 AIVGYTNAGKSTLLNTLTGSQVMEEDKLFATLDPTTRVLELPSGQEMLLTDTVGFIRKLP 263 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 H L+ + ++LH+V A N QA Q Sbjct: 264 HHLIDAFRSTLEEAKYADIILHVVDA--SNPQAEQQM 298 >gi|240143896|ref|ZP_04742497.1| GTP-binding protein HflX [Roseburia intestinalis L1-82] gi|257204088|gb|EEV02373.1| GTP-binding protein HflX [Roseburia intestinalis L1-82] Length = 414 Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 4/124 (3%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN-A 220 I+G NAGKST L +T A D F TL P +++ G +E +L D G I+ Sbjct: 205 AIVGYTNAGKSTLLNHLTGAGVLEEDKLFATLDPTTRVLELPGRQEILLTDTVGFIRKLP 264 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H L+ + ++H+V A + D L Y ++R+K I ++ Sbjct: 265 HHLIEAFKSTLEEAKYADYIVHVVDASNPQRDKQMHIVYDTL--YQLDIREKTVITLFNK 322 Query: 281 IDTV 284 D V Sbjct: 323 QDQV 326 >gi|183599734|ref|ZP_02961227.1| hypothetical protein PROSTU_03237 [Providencia stuartii ATCC 25827] gi|188021993|gb|EDU60033.1| hypothetical protein PROSTU_03237 [Providencia stuartii ATCC 25827] Length = 490 Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 10/135 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + + L+ E V+L +V A + A DE A + RKK Sbjct: 60 IDGTEEGVETHMAAQSLQAIEEADVVLFMVDARAGLMPA------DEGIAKHLRSRKKKT 113 Query: 275 IVGLSQIDTVDSDTL 289 + ++ D +D+D++ Sbjct: 114 YLVANKTDGIDADSV 128 >gi|42560997|ref|NP_975448.1| GTP-binding protein Era [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492494|emb|CAE77090.1| GTP-BINDING PROTEIN ERA HOMOLOG [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320412|gb|ADK69055.1| GTP-binding protein Era [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 301 Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 19/170 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIV-KEGYKEFILADIPGIIKN 219 + IIG PN GKST L + K I + P TT GI+ K+ + + D PG+ Sbjct: 9 VSIIGRPNVGKSTLLNKLIGEKISIVTNKPQTTRNNIRGILTKKDQYQIVFIDTPGV--- 65 Query: 220 AHQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 H D+F LK T+ V+L + + +E + +L ++ + + Sbjct: 66 -HTSKKQLDKFLNTSALKSTKDVDVILFLAPS-DEVIGKNDLFLLKQIKNLDV-----FK 118 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECL 322 I+ +++ D V + L K NE ++ Q SSIT I ++LE + Sbjct: 119 ILVITKADNVTKEQLILKANEWSSYQDQFDEIIITSSITNLNIEKLLELI 168 >gi|114319757|ref|YP_741440.1| GTP-binding protein EngA [Alkalilimnicola ehrlichii MLHE-1] gi|122312352|sp|Q0AB37|DER_ALHEH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|114226151|gb|ABI55950.1| small GTP-binding protein [Alkalilimnicola ehrlichii MLHE-1] Length = 467 Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 I ++G PN GKST +TR++ +AD+P T G+ K G + +I+ D G+ Sbjct: 5 IALVGRPNVGKSTLFNQLTRSRDALVADHPGLTRDRQYGVGKVGERPYIVVDTGGL 60 >gi|291539580|emb|CBL12691.1| GTP-binding protein HflX [Roseburia intestinalis XB6B4] Length = 414 Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 4/124 (3%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN-A 220 I+G NAGKST L +T A D F TL P +++ G +E +L D G I+ Sbjct: 205 AIVGYTNAGKSTLLNHLTGAGVLEEDKLFATLDPTTRVLELPGRQEILLTDTVGFIRKLP 264 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H L+ + ++H+V A + D L Y ++R+K I ++ Sbjct: 265 HHLIEAFKSTLEEAKYADYIVHVVDASNPQRDKQMHIVYDTL--YQLDIREKTVITLFNK 322 Query: 281 IDTV 284 D V Sbjct: 323 QDQV 326 >gi|290790335|pdb|3LX5|A Chain A, Crystal Structure Of Mgmppnp-Bound Nfeob From S. Thermophilu gi|290790336|pdb|3LX8|A Chain A, Crystal Structure Of Gdp-Bound Nfeob From S. Thermophilus Length = 272 Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 6/104 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + +I +IG PN+GK++ +T ++ ++P T+ G+VK+ K+ + D+PGI Sbjct: 3 MTEIALIGNPNSGKTSLFNLITGHNQRVGNWPGVTVERKSGLVKKN-KDLEIQDLPGIYS 61 Query: 219 NAHQGA--GIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCI 258 + + +L ++R +L++V A LE N+ Q I Sbjct: 62 MSPYSPEEKVARDYL-LSQRADSILNVVDATNLERNLYLTTQLI 104 >gi|189485591|ref|YP_001956532.1| Fe2+-transporter membrane unit [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287550|dbj|BAG14071.1| Fe2+-transporter membrane unit [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 698 Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust. Identities = 43/178 (24%), Positives = 83/178 (46%), Gaps = 17/178 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYK-EFILADIPGIIK- 218 + ++G PN+GKST S+T + + +YP T+ G+ K +GY FI D+PG Sbjct: 9 VALVGNPNSGKSTIFNSLTGSNQNVGNYPGITVEKKEGLKKYKGYNVNFI--DLPGTYSL 66 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIV 276 +A+ + R E+ V+++++ + +E N+ Q + EL + I+ Sbjct: 67 SAYSDDEVVVRNFLLNEKLDVVVNVIDSANMERNLYLFTQIV---------ELDMPV-IM 116 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 L+ +D + S K ++ G F + GI IL+C+ + ++ +N+ Sbjct: 117 VLNMVDILKSHGKTVDKKVMSDILGVPIFATVASKDVGIVDILDCVVNTFENVEFKNQ 174 >gi|269926863|ref|YP_003323486.1| small GTP-binding protein [Thermobaculum terrenum ATCC BAA-798] gi|269790523|gb|ACZ42664.1| small GTP-binding protein [Thermobaculum terrenum ATCC BAA-798] Length = 448 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 5/95 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + I I+G PN GKS L ++ + + ++D P TT P ++ G + +L D GI Sbjct: 185 VVRIAIVGRPNVGKSRLLNAILGQERAIVSDVPGTTRDPVDTEIQWGDQRIVLIDTAGIR 244 Query: 218 KNAHQGAGIGD----RFLKHTERTHVLLHIVSALE 248 + +GI R L+ R+ V+L ++ A E Sbjct: 245 RRGKVESGIEQYSVFRTLRAIGRSDVVLLLIDAQE 279 >gi|260598897|ref|YP_003211468.1| GTP-binding protein Der [Cronobacter turicensis z3032] gi|260218074|emb|CBA32819.1| GTP-binding protein engA [Cronobacter turicensis z3032] Length = 492 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 10/133 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + +EFI D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I A +G + ++ L E V+L +V A + A DE A + R+K Sbjct: 60 IDGAEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSRQKPT 113 Query: 275 IVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 114 FLVANKTDGLDPD 126 >gi|172041010|ref|YP_001800724.1| GTP-binding protein Era [Corynebacterium urealyticum DSM 7109] gi|171852314|emb|CAQ05290.1| putative GTP-binding protein [Corynebacterium urealyticum DSM 7109] Length = 346 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 32/136 (23%), Positives = 66/136 (48%), Gaps = 12/136 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +G PN GKST ++ K I AD P TT +P G+V + ++ D PG+ + Sbjct: 51 VSFVGRPNTGKSTLTNALVGEKIAITADQPETTRHPIRGLVHRPKAQIVVVDTPGLHRPR 110 Query: 221 HQGAGIGDRFLKHTERTHV---LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 +G+R + T+V L+ + +E + + I++ + ++ K+ ++G Sbjct: 111 ---TLLGERLNDVVKETYVDMDLICVCVPADEKIGPGDRWIVENV----RQVAPKVPLMG 163 Query: 278 L-SQIDTVDSDTLARK 292 + ++ D V D + ++ Sbjct: 164 IVTKTDKVSKDRVGQQ 179 >gi|327541274|gb|EGF27817.1| GTPase HflX [Rhodopirellula baltica WH47] Length = 459 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 26/138 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL--------YPNLGIVKEGYKEFILADI 213 + ++G NAGKST + ++T A D F TL P G V +L+D Sbjct: 204 VSLVGYTNAGKSTLMNALTDAGVMAQDKLFATLDTRTRRWHLPEWGHV-------LLSDT 256 Query: 214 PGIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSE 268 G I++ H L+ T + +LLH+ A + E + A YQ +L+EL Sbjct: 257 VGFIRDLPHSLVASFKSTLEETRQAELLLHVADASSPQVFEQISAVYQ-VLEELG----- 310 Query: 269 LRKKIEIVGLSQIDTVDS 286 + K ++ L++ID + S Sbjct: 311 IEAKDTLLVLNKIDAITS 328 >gi|319787579|ref|YP_004147054.1| GTP-binding protein Era [Pseudoxanthomonas suwonensis 11-1] gi|317466091|gb|ADV27823.1| GTP-binding protein Era [Pseudoxanthomonas suwonensis 11-1] Length = 307 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 9/98 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST + ++ AK I ++ P TT + LGI + +L D PG+ Sbjct: 15 VAVVGRPNVGKSTLVNALVGAKVSIVSNRPQTTRHRLLGIATVPGGQMLLVDTPGL---- 70 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCI 258 H+ G RF K + + V+ E+V AA + Sbjct: 71 HRQEG---RF-KASAMSRVMNRTARGAVEDVDAAVLVV 104 >gi|296535949|ref|ZP_06898098.1| GTP-binding protein Era [Roseomonas cervicalis ATCC 49957] gi|296263722|gb|EFH10198.1| GTP-binding protein Era [Roseomonas cervicalis ATCC 49957] Length = 319 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + ++G PNAGKST + + AK I + P TT + +V + + +L D PGI Sbjct: 30 VAVVGAPNAGKSTLVNRLAGAKVSIVSPKPQTTRFRIRAVVMQERTQIVLTDTPGI 85 >gi|291407511|ref|XP_002720067.1| PREDICTED: guanine nucleotide binding protein-like 3 (nucleolar)-like isoform 1 [Oryctolagus cuniculus] Length = 575 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 12/106 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGYKEFI-LADIPGIIKN 219 +G++GLPN GKS+ + S+ R++ + P T + + + +FI L D PGI+ Sbjct: 248 VGVVGLPNVGKSSLINSLKRSRACSVGAVPGVTKF----MQEVHLDKFIRLLDAPGIVPG 303 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + G R H ++ L V+ +E +Q +C L+E+S+Y Sbjct: 304 PNSEVGTILRNCIHVQQ---LADPVTPVETILQ---RCNLEEISSY 343 >gi|262404428|ref|ZP_06080983.1| ferrous iron transport protein B [Vibrio sp. RC586] gi|262349460|gb|EEY98598.1| ferrous iron transport protein B [Vibrio sp. RC586] Length = 758 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 17/169 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ +G EF L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKIGRFTHAGDEFQLTDLPGIYALDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH V++++V A LE ++ Q ELR+ + IV Sbjct: 68 SNSIDESIASRAVLTHPADVIINVVDATCLERSLYMTLQL---------RELRRPM-IVV 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L+++D + + + +L G S+ + + + E LH + Sbjct: 118 LNKMDALKRERVHLDLKQLEHFLGCPVIALSANSKEQVRRFQEKLHKLV 166 >gi|326794518|ref|YP_004312338.1| GTP-binding protein engA [Marinomonas mediterranea MMB-1] gi|326545282|gb|ADZ90502.1| GTP-binding protein engA [Marinomonas mediterranea MMB-1] Length = 445 Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I I ++G PN GKST +T+++ +ADYP T G K G +FI+ D GI Sbjct: 1 MIPVIALVGRPNVGKSTLFNRLTKSRDALVADYPGLTRDRKYGDGKLGEHDFIVIDTGGI 60 Score = 36.2 bits (82), Expect = 7.1, Method: Compositional matrix adjust. Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 11/149 (7%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 IG++G PN GKST + + + + D P TT + KE+ L D G+ + Sbjct: 182 IGVVGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSVYIPYQRHDKEYTLIDTAGVRRRK 241 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H + + L+ + +V++ ++ A E+ V+ I L A + ++ Sbjct: 242 HVKEAVEKFSIVKTLQAIQDANVVICVIDAHEDLVEQDLHMIGYVLDA------GRGLVI 295 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPF 305 +++ D + D K E+ + G VP+ Sbjct: 296 AINKWDGMQKDEREHIKKEVERRLGFVPY 324 >gi|55820698|ref|YP_139140.1| GTP-binding protein Era [Streptococcus thermophilus LMG 18311] gi|55736683|gb|AAV60325.1| GTP-binding protein [Streptococcus thermophilus LMG 18311] Length = 299 Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 15/171 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEPRGKGDDMIIERLKQAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q + S++ G+ + +++ L D + Sbjct: 119 VVNKIDKVHPDQLLEQIDDFRKQMDFKEIIPISALQGNNVSHLVDVLSDNL 169 >gi|296387686|ref|ZP_06877161.1| GTP-binding protein EngA [Pseudomonas aeruginosa PAb1] Length = 493 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 9/136 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +T+++ I A+Y T G + + +I+ D GI Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEARWQGRTYIVIDTGGI 60 Query: 217 IKNAHQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + A + ++ L+ E +L +V + + AA Q I + L R K Sbjct: 61 SGDEEGIDAKMAEQSLQAIEEADAVLFLVDS-RAGMTAADQMIAEHLRK-----RNKRSF 114 Query: 276 VGLSQIDTVDSDTLAR 291 + +++DT+D D LAR Sbjct: 115 LVANKVDTIDPD-LAR 129 >gi|291618407|ref|YP_003521149.1| EngA [Pantoea ananatis LMG 20103] gi|291153437|gb|ADD78021.1| EngA [Pantoea ananatis LMG 20103] gi|327394799|dbj|BAK12221.1| GTP-binding protein EngA [Pantoea ananatis AJ13355] Length = 494 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 10/133 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G + +EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I G + ++ L E V+L +V A + AA Q I L + R+K Sbjct: 60 IDGTEDGVETRMAEQSLLAIEEADVVLFMVDA-RAGMMAADQQIAKHLRS-----RQKAT 113 Query: 275 IVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 114 FLVANKTDGLDPD 126 >gi|282860195|ref|ZP_06269269.1| GTP-binding protein Era [Prevotella bivia JCVIHMP010] gi|282587016|gb|EFB92247.1| GTP-binding protein Era [Prevotella bivia JCVIHMP010] Length = 293 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 8/93 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + + K IA + TT + +GIV + + +D PG++K Sbjct: 7 VNIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTDDAQIVFSDTPGVLKPN 66 Query: 221 HQGAGIGDRFLKHTER----THVLLHIVSALEE 249 ++ + + L+ +E VLL++ +E+ Sbjct: 67 YK---MQEMMLQFSESALADADVLLYVTDVVEK 96 >gi|261402882|ref|YP_003247106.1| small GTP-binding protein [Methanocaldococcus vulcanius M7] gi|261369875|gb|ACX72624.1| small GTP-binding protein [Methanocaldococcus vulcanius M7] Length = 340 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 4/59 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + + I G PN GKST L +T A +I YPFTT N+G + E + D PG++ Sbjct: 170 LPTVVIAGYPNVGKSTLLKKLTGADVEINSYPFTTKGINVGYM----GEIQMVDTPGLL 224 >gi|148273200|ref|YP_001222761.1| putative GTP-binding protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831130|emb|CAN02082.1| putative GTP-binding protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 521 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 2/90 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGII 217 + + I+G NAGKS+ L VT+A + + F TL + + + + LAD G + Sbjct: 298 VPSVAIVGYTNAGKSSLLNRVTKAGVLVENALFATLDATVRKTETDQGQLYTLADTVGFV 357 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA 246 +N HQ L+ + VL+H+V A Sbjct: 358 RNLPHQLVEAFRSTLEELADSDVLVHVVDA 387 >gi|126179643|ref|YP_001047608.1| small GTP-binding protein [Methanoculleus marisnigri JR1] gi|125862437|gb|ABN57626.1| small GTP-binding protein [Methanoculleus marisnigri JR1] Length = 371 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 1/91 (1%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 A + ++G P+ GKST L +T A Y FTT+ G ++ + + DIPG+I Sbjct: 64 ATVVLVGFPSVGKSTLLNRLTGDDISATAAYAFTTVSVIPGSMEHRGAKIQVLDIPGLIA 123 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 A G G G + ++L +V E Sbjct: 124 GAAMGKGRGKEVIAVVRSADLILVLVDVFNE 154 >gi|84995494|ref|XP_952469.1| nucleolar GTP-binding protein 1 [Theileria annulata strain Ankara] gi|65302630|emb|CAI74737.1| nucleolar GTP-binding protein 1, putative [Theileria annulata] Length = 597 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + G PN GKS+F+ V+RA + Y FTT +G Y + + D PG++ Sbjct: 177 LTGYPNVGKSSFMNLVSRANVDVQPYAFTTRSLYVGHFDYNYLRWQVIDTPGLL 230 >gi|322387708|ref|ZP_08061317.1| GTP-binding protein Era [Streptococcus infantis ATCC 700779] gi|321141575|gb|EFX37071.1| GTP-binding protein Era [Streptococcus infantis ATCC 700779] Length = 311 Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 20 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 77 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 78 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEPRGKGDDMIIERLKAAKVPV-----IL 130 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + +++ L + + Sbjct: 131 VVNKIDKVHPDQLLAQIDDFRNQMDFKEIVP--ISALQGNNVSHLIDILSENL 181 >gi|312218896|emb|CBX98841.1| similar to GTP-binding protein [Leptosphaeria maculans] Length = 418 Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 196 PNLGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 PN G +G + L D+ G++ AH+G G+G+RFL L+H+V Sbjct: 52 PNYGSCVDGKRSVPIELLDVAGLVPGAHEGKGLGNRFLDDLRHADALVHVV 102 >gi|238763554|ref|ZP_04624515.1| GTP-binding protein engA [Yersinia kristensenii ATCC 33638] gi|238698186|gb|EEP90942.1| GTP-binding protein engA [Yersinia kristensenii ATCC 33638] Length = 494 Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I I ++G PN GKST +T + +AD+P T G + EFI+ D GI Sbjct: 1 MIPVIALVGRPNVGKSTLFNRLTHTRDALVADFPGLTRDRKYGRAEVEGHEFIVIDTGGI 60 Query: 217 --IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 ++ + G L E ++L +V A + A Q I L + R+K Sbjct: 61 DGTEDGVETKMAGQSLLA-IEEADIVLFMVDA-RAGLMPADQGIAQHLRS-----REKAT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + ++ D +D+DT A L G+V ++ G G+ Q++E Sbjct: 114 FLVANKTDGIDADTAAADFYSLG--LGEV-HAIAASHGRGVTQLIE 156 >gi|119511690|ref|ZP_01630795.1| GTP-binding protein Era [Nodularia spumigena CCY9414] gi|119463675|gb|EAW44607.1| GTP-binding protein Era [Nodularia spumigena CCY9414] Length = 324 Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 16/168 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 IGIIG PN GKST + + K I T L GI+ + I D PGI K Sbjct: 35 IGIIGRPNVGKSTLMNQLVGQKIAITSPIAQTTRNRLRGILTTPEAQLIFVDTPGIHKPH 94 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 HQ +G +K+ + V+L +V A + I D L + + I+ Sbjct: 95 HQ---LGQVLVKNARNAIDSVDVVLFVVDG-SVACGAGDRFIADLLVRTETPV-----IL 145 Query: 277 GLSQIDTVDSDTLARKKNELA-TQCGQVPF-EFSSITGHGIPQILECL 322 GL++ID + + A + Q P +FS+ TG G+P++ + L Sbjct: 146 GLNKIDQQPPNFQPIDDSYQALAETQQWPIVKFSAQTGAGLPELQQLL 193 >gi|325578764|ref|ZP_08148811.1| ribosome-associated GTPase EngA [Haemophilus parainfluenzae ATCC 33392] gi|325159588|gb|EGC71720.1| ribosome-associated GTPase EngA [Haemophilus parainfluenzae ATCC 33392] Length = 506 Score = 38.9 bits (89), Expect = 0.98, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 12/176 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHANISGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A +A ++ Y + K +V Sbjct: 65 EEGVEEKMAEQSLLAIEEADVVLFLVDA-----RAGLTAADIGIANYLRQRTNKTTVVVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENE 334 ++ D +D+D+ + +L G++ + ++ G G+ Q++E + + ENE Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGKIE-QIAASQGRGVTQLMEQVLAPLAEKLQENE 172 >gi|312173198|emb|CBX81453.1| GTP-binding protein engA [Erwinia amylovora ATCC BAA-2158] Length = 499 Score = 38.9 bits (89), Expect = 0.98, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 8/133 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G + +EFI D GI Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60 Query: 217 IKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 N + ++ L E V+L +V A + A I L A R+K Sbjct: 61 DGNEEGVETRMAEQSLLAIEEADVVLFMVDA-RAGLMPADTAIAKHLRA-----RQKPTF 114 Query: 276 VGLSQIDTVDSDT 288 + ++ D +D+D+ Sbjct: 115 IVANKTDGLDADS 127 >gi|297199566|ref|ZP_06916963.1| GTP-binding protein Era [Streptomyces sviceus ATCC 29083] gi|197713506|gb|EDY57540.1| GTP-binding protein Era [Streptomyces sviceus ATCC 29083] Length = 322 Score = 38.9 bits (89), Expect = 0.98, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 11/132 (8%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I A+ P TT + GIV + IL D PG+ K Sbjct: 29 VGRPNAGKSTLTNALVGHKVAITANQPQTTRHTVRGIVHREDAQLILVDTPGLHKPR--- 85 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ E + + I EL+ ++K ++ +++ Sbjct: 86 TLLGERLNDVVRTTWAEVDVIGFCLPANEKLGPGDRFIAKELAG----IKKSPKVAIITK 141 Query: 281 IDTVDSDTLARK 292 D VDS TLA + Sbjct: 142 TDLVDSKTLAEQ 153 >gi|157736804|ref|YP_001489487.1| ferrous iron transport protein B [Arcobacter butzleri RM4018] gi|157698658|gb|ABV66818.1| ferrous iron transport protein B [Arcobacter butzleri RM4018] Length = 702 Score = 38.9 bits (89), Expect = 0.98, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 11/164 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG--I 216 + I ++G PN GKS + S++ AK K+ ++P T+ K EF + D+PG Sbjct: 5 VIKIALVGQPNVGKSMLINSISGAKLKVGNFPGVTVSKEEVFFKYKDYEFQIIDLPGSYS 64 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + N I FL + ++L++V + N+Q + L L K I+ Sbjct: 65 LNNYSIEEKITKDFL-YNSTYDLILNVVDS--TNLQR------NLLLTTELLLLNKKMII 115 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 L+ ID + + + EL + G+ + S+ GI +LE Sbjct: 116 ALNMIDEANDELIEINDAELGSILGRPCVKTSASKKIGIQTLLE 159 >gi|194366746|ref|YP_002029356.1| GTP-binding protein Era [Stenotrophomonas maltophilia R551-3] gi|226741238|sp|B4SRK9|ERA_STRM5 RecName: Full=GTPase Era gi|194349550|gb|ACF52673.1| GTP-binding protein Era [Stenotrophomonas maltophilia R551-3] Length = 298 Score = 38.9 bits (89), Expect = 0.98, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + +IG PN GKST ++ AK I ++ P TT + LGI + +L D PG+ K Sbjct: 12 VAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATYPEGQLVLVDTPGLHK 69 >gi|295132648|ref|YP_003583324.1| GTP-binding protein [Zunongwangia profunda SM-A87] gi|294980663|gb|ADF51128.1| putative GTP-binding protein [Zunongwangia profunda SM-A87] Length = 294 Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + A V I TT + LGIV + IL+D PGIIK A Sbjct: 8 VNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGEDFQVILSDTPGIIKPA 67 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIV 244 ++ F+K E +L+++V Sbjct: 68 YELQESMMDFVKSAFEDADILVYMV 92 >gi|269794669|ref|YP_003314124.1| GTP-binding protein Era [Sanguibacter keddieii DSM 10542] gi|269096854|gb|ACZ21290.1| GTP-binding protein Era [Sanguibacter keddieii DSM 10542] Length = 314 Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 3/128 (2%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NAHQ 222 +G PNAGKST ++ K I +D P TT + GIV + IL D PG+ + Sbjct: 22 VGRPNAGKSTLTNALVGQKVAITSDRPQTTRHTIRGIVNRPDAQLILVDTPGLHRPRTLL 81 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQID 282 G + D V+ + A ++ V + I ++L+ N R I +++ D Sbjct: 82 GERLNDLVRDTLSEVDVIAFCLPA-DQKVGPGDRYIANQLAELNRGRRGTPVIAVVTKAD 140 Query: 283 TVDSDTLA 290 V + LA Sbjct: 141 LVTHEQLA 148 >gi|227488410|ref|ZP_03918726.1| GTP-binding protein Era [Corynebacterium glucuronolyticum ATCC 51867] gi|227091624|gb|EEI26936.1| GTP-binding protein Era [Corynebacterium glucuronolyticum ATCC 51867] Length = 308 Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 80/174 (45%), Gaps = 18/174 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +G PN GKST ++ K I A+ P TT +P GIV + I+ D PG+ + Sbjct: 20 VSFVGRPNTGKSTLTNALVGQKIAITANQPETTRHPIRGIVHRDDAQVIVVDTPGLHRPR 79 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 +G+R + + T+ + +++ +E + + ILD + + K ++G Sbjct: 80 ---TLLGERLNEQVKETYADVDVIALTIPADEKIGPGDRWILDAV----RNVAPKTTLIG 132 Query: 278 -LSQIDTVDSDTLARKKNELAT----QCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D + + L +C VP S++ + + + + DK+ Sbjct: 133 VVTKIDKVGRDQVMVQLQALHELLGGECEVVP--CSAVKQEQLDVLTDVIVDKL 184 >gi|50122138|ref|YP_051305.1| GTP-binding protein EngA [Pectobacterium atrosepticum SCRI1043] gi|81827050|sp|Q6D280|DER_ERWCT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|49612664|emb|CAG76114.1| probable GTP-binding protein [Pectobacterium atrosepticum SCRI1043] Length = 495 Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 17/170 (10%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D GI Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIIDTGGI 60 Query: 217 IKNAHQGAGIGDRF----LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G+ R L E ++L +V A + A DE A + R+K Sbjct: 61 DGTED---GVETRMAGQSLVAIEEADIVLFMVDARAGLMPA------DEGIAKHLRSREK 111 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + ++ ++ D +D D + L G+V + ++ G G+ +LE + Sbjct: 112 MTVLVANKTDGLDPDMVTADFYSLG--MGEV-YAIAASHGRGVTSLLETV 158 >gi|14521269|ref|NP_126744.1| ferrous iron transport protein b - like [Pyrococcus abyssi GE5] gi|5458487|emb|CAB49975.1| feoB ferrous iron transport protein B homolog GTP-binding [Pyrococcus abyssi GE5] Length = 661 Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust. Identities = 17/59 (28%), Positives = 36/59 (61%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GK+T ++T + + ++P T+ GI++ KE+++ D+PGI Sbjct: 1 MLKVVALVGNPNVGKTTIFNALTGMRQHVGNWPGVTVEKKEGIMEYKGKEYLVVDLPGI 59 >gi|312959173|ref|ZP_07773692.1| GTP-binding protein Era [Pseudomonas fluorescens WH6] gi|311286943|gb|EFQ65505.1| GTP-binding protein Era [Pseudomonas fluorescens WH6] Length = 233 Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT + LGI EG + + D PG+ K Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGSVQAVYVDTPGMHKG- 70 Query: 221 HQGAGIGDRFLKHT 234 G +R++ T Sbjct: 71 --GEKALNRYMNKT 82 >gi|255086559|ref|XP_002509246.1| predicted protein [Micromonas sp. RCC299] gi|226524524|gb|ACO70504.1| predicted protein [Micromonas sp. RCC299] Length = 468 Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 22/176 (12%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYP-NLGIVKEGYKEFILADIPGI--- 216 + IIG PN GKS+ L + A+ ++DY TT + ++ K++ L D GI Sbjct: 200 VAIIGRPNVGKSSLLNQLAGDARSIVSDYSGTTRDTIDSDVIGADGKKYTLIDTAGIRRR 259 Query: 217 -----IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 K+A + +G R L+ R V++ ++ A E Q + +L E +A Sbjct: 260 TSVAASKDAPESLAVG-RALQAMRRADVVVLVIDAEEGPSQQDF--VLSERAAVQEGC-- 314 Query: 272 KIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSI------TGHGIPQILEC 321 ++ +++ D +D DT + + + FE++S+ TG + ++L+ Sbjct: 315 -ALVLCVNKWDRIDKDTYSMNEYTKTLRSKLRVFEWASVVYTSALTGQRVQKVLQA 369 >gi|326504304|dbj|BAJ90984.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 527 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 21/176 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I + ++G NAGKST L +T A D F TL P ++ + EF+L D G I Sbjct: 327 IPVVSLVGYTNAGKSTLLNRLTGADVLAEDKLFATLDPTTRRVLMKSGTEFLLTDTVGFI 386 Query: 218 KNAHQGAGIGDR-FLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKI 273 + R L+ + +++H+V + Q A +L EL ++ Sbjct: 387 QKLPTMLVAAFRATLEEISESSIIVHLVDISHQLAQQQIGAVDKVLKEL-----DIDSVP 441 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQ---CGQVPFEFSSITGHGIPQILECLHDKI 326 ++V ++ID ++D R K E A Q C S++ G G+ ++ + K+ Sbjct: 442 KLVVWNKID--NTDNPLRVKEEAAKQGIIC------ISAMNGDGLEELCNAIQAKL 489 >gi|227495843|ref|ZP_03926154.1| possible GTP-binding protein HflX [Actinomyces urogenitalis DSM 15434] gi|226834600|gb|EEH66983.1| possible GTP-binding protein HflX [Actinomyces urogenitalis DSM 15434] Length = 553 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 14/165 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 I + I G NAGKS+ + +T A + D F TL P + + + + L D G + Sbjct: 313 IPSVAIAGYTNAGKSSLMNRLTDAGLMVQDALFATLDPTVRKAETSDGRLYTLTDTVGFV 372 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKI 273 +N H+ L+ VL+H+V A + AA + +L E+ + Sbjct: 373 RNLPHELIEAFRSTLEEVAGADVLVHVVDAAHPDPLSQIAAVRAVLAEIPGA----LEVP 428 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 E++ L++ D D+ TLA + L S+ TG G+ ++ Sbjct: 429 ELIVLNKADLADAVTLAALRTRLPEAV-----IVSAATGEGLDEL 468 >gi|190575413|ref|YP_001973258.1| GTP-binding protein Era [Stenotrophomonas maltophilia K279a] gi|226741239|sp|B2FPX8|ERA_STRMK RecName: Full=GTPase Era gi|190013335|emb|CAQ46969.1| putative GTP-binding protein [Stenotrophomonas maltophilia K279a] Length = 298 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + +IG PN GKST ++ AK I ++ P TT + LGI + +L D PG+ K Sbjct: 12 VAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATYPEGQLVLVDTPGLHK 69 >gi|108763403|ref|YP_631947.1| GTP-binding protein Era [Myxococcus xanthus DK 1622] gi|108467283|gb|ABF92468.1| GTP-binding protein Era [Myxococcus xanthus DK 1622] Length = 314 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 18/136 (13%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +IG PN GKST L ++T K I + P TT LG+V + D PGI H Sbjct: 13 ALIGRPNVGKSTLLNALTGEKIAIVSPKPQTTRNRILGVVTRPEGQVAFIDTPGI----H 68 Query: 222 QGAGIGDRF-----LKHTERTHVLLHIV---SALEENVQAAYQCILDELSAYNSELRKKI 273 Q G +R+ L+ E ++L ++ ++ + V + ILD L K Sbjct: 69 QAKGELNRYMVEVALQAAEEVDLVLFLIEPPASEKPEVSPGNRAILDRLQKIG-----KP 123 Query: 274 EIVGLSQIDTVDSDTL 289 + +++ID+V L Sbjct: 124 TFLVINKIDSVPKSQL 139 >gi|20093647|ref|NP_613494.1| GTP-binding protein [Methanopyrus kandleri AV19] gi|25452940|sp|Q8TYT5|ENGB_METKA RecName: Full=Probable GTP-binding protein EngB gi|19886519|gb|AAM01424.1| Predicted GTPase of the YihA family [Methanopyrus kandleri AV19] Length = 203 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 44/193 (22%), Positives = 84/193 (43%), Gaps = 30/193 (15%) Query: 159 IADIGIIGLPNAGKSTFLASVTR--AKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + +I ++G N GKS+ + ++TR A ++ P T P + E E +L D+PG Sbjct: 1 MPEIVLVGRSNVGKSSLIRAITRGAADVRVGKRPGVTRKP---VFHELDGELVLVDMPGF 57 Query: 217 -----IKNAHQGAGIGD---RFLKHTERTHVLLHIVSA-----LEENVQAAYQCILD-EL 262 + +Q + D R+L+ + +H+V A + E + + +D E+ Sbjct: 58 GFMSGVPRRYQ-ERVKDLIVRYLEEKDNILFAIHVVDAKALPEIAERWERRGEIPIDREM 116 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP---------FEFSSITGH 313 + +E+ IV ++ID + + +A G P F S+ TG Sbjct: 117 FQFLNEVGLD-PIVAANKIDKIKPIEFEEHMDAVAEALGLFPPWRQWLDTLFPISAKTGE 175 Query: 314 GIPQILECLHDKI 326 G+ + LE L +++ Sbjct: 176 GLVEFLEALQERV 188 >gi|294011701|ref|YP_003545161.1| GTP-binding protein Era [Sphingobium japonicum UT26S] gi|292675031|dbj|BAI96549.1| GTP-binding protein Era [Sphingobium japonicum UT26S] Length = 302 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I I+G PNAGKST + ++ K I TT +G+ EG + +L D PGI + Sbjct: 13 IAIVGAPNAGKSTLVNALVGQKVAITSPKAQTTRTRVMGVAIEGDAQMVLVDTPGIFQ 70 >gi|332519776|ref|ZP_08396240.1| GTP-binding protein Era [Lacinutrix algicola 5H-3-7-4] gi|332044335|gb|EGI80529.1| GTP-binding protein Era [Lacinutrix algicola 5H-3-7-4] Length = 293 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 16/165 (9%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + A V I TT + LGIV + +L+D PGIIK A Sbjct: 8 VNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRILGIVNGENFQVVLSDTPGIIKPA 67 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 ++ F+K + +L+++V E+ ++ DE + +N KI ++ L Sbjct: 68 YELQASMMDFVKSAFDDADLLIYMVEIGEKELK-------DE-AFFNKITNAKIPVLLL- 118 Query: 280 QIDTVDSDTLARKKNELATQCGQVP----FEFSSITGHGIPQILE 320 ++ +D + + ++ +VP S++ G + ++ + Sbjct: 119 -LNKIDKSNQVQLEEQVQLWATKVPNAEIIAISALEGFNVKEVFD 162 >gi|222054805|ref|YP_002537167.1| GTP-binding proten HflX [Geobacter sp. FRC-32] gi|221564094|gb|ACM20066.1| GTP-binding proten HflX [Geobacter sp. FRC-32] Length = 552 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 16/156 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 I I+G NAGKST L ++T++ + F TL + ++ +E I+ D G I++ Sbjct: 371 ISIVGYTNAGKSTLLNTLTQSDVFTENLLFATLDTSTRRLRFPRDREVIITDTVGFIRSL 430 Query: 221 HQG-AGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKIEI 275 + G L+ + +LLH+V EE++ + + ILDEL EL K + Sbjct: 431 PKSLMGAFKATLEELQDADLLLHLVDCSNPRFEEHI-SQVETILDEL-----ELETKPRL 484 Query: 276 VGLSQIDTVDSDTLARKKNEL-ATQCGQVPFEFSSI 310 + ++ D + T +KK+ L A + Q S+I Sbjct: 485 LVFNKTDLL---TEMKKKDPLTAMKVRQASRRLSAI 517 >gi|313497226|gb|ADR58592.1| EngA [Pseudomonas putida BIRD-1] Length = 487 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 11/167 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +T+ + I D T G + FIL D GI Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGI 60 Query: 217 I-KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + ++ L E +L +V A + AA Q I + L R K I Sbjct: 61 TGDEVGMDEKMAEQSLMAIEEADYVLFLVDA-RAGMTAADQMIAEHLRK-----RNKAAI 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + ++ID +D D +AR + +P S G GI ++E + Sbjct: 115 LVANKIDNIDPD-VARAEFSPMGMGNAIPVAGSQ--GRGINALMEAV 158 >gi|313672666|ref|YP_004050777.1| gtp-binding protein hflx [Calditerrivibrio nitroreducens DSM 19672] gi|312939422|gb|ADR18614.1| GTP-binding protein HflX [Calditerrivibrio nitroreducens DSM 19672] Length = 552 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 8/133 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + I+G NAGKST L ++T++ + F TL ++ +E IL D G I+N Sbjct: 375 VSIVGYTNAGKSTLLNNLTKSDVYADNLMFATLDTTSKRLRFPEDRECILTDTVGFIRNL 434 Query: 221 HQG-AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR--KKIEIVG 277 + G L+ E + + +H+V N Q Y+ +D ++ EL+ K +I+ Sbjct: 435 PESLKGAFKSTLEELEESDLFIHLVDI--SNTQ--YKKQIDAVNQIFEELKLNDKPKIMV 490 Query: 278 LSQIDTVDSDTLA 290 ++ID VD + Sbjct: 491 FNKIDLVDKQVIT 503 >gi|309799274|ref|ZP_07693522.1| GTP-binding protein [Streptococcus infantis SK1302] gi|308117119|gb|EFO54547.1| GTP-binding protein [Streptococcus infantis SK1302] Length = 73 Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Query: 208 FILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSAL-EENV 251 F DI GI+K A +G G+G++FL + ++H+V A +ENV Sbjct: 12 FEFTDIAGIVKGASRGEGLGNKFLANIREVDAIVHVVRAFDDENV 56 >gi|282858168|ref|ZP_06267363.1| GTP-binding protein Era [Pyramidobacter piscolens W5455] gi|282584090|gb|EFB89463.1| GTP-binding protein Era [Pyramidobacter piscolens W5455] Length = 303 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 2/106 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PN GKS+ L + + K I P TT LG+ + + D PGI Sbjct: 10 VAVIGRPNVGKSSLLNRILKYKLSIVSAKPQTTRDNILGLYNGAASQILFVDTPGIHAPL 69 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 ++ G + +R + E +V+L++V+ + Q+ IL L Y Sbjct: 70 NKLGERLVERAVSGLEDANVVLYVVTIDDRPEQSENDRILKVLRDY 115 >gi|260221257|emb|CBA29640.1| GTP-binding protein hflX [Curvibacter putative symbiont of Hydra magnipapillata] Length = 390 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 19/137 (13%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFILADIPGIIK 218 +I +IG NAGKST ++ +A+ AD F TL + E + L+D G I+ Sbjct: 201 NISLIGYTNAGKSTLFNALVKARAYAADQLFATLDTTTRQLYLGEANRSVSLSDTVGFIR 260 Query: 219 NAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQ-----AAYQCILDELSAYNSELR 270 + G+ D F L+ +LLH+V A NV A Q +L E+ A + Sbjct: 261 DLPH--GLVDAFQATLQEAIDADLLLHVVDA--ANVDFPEQIAQVQAVLKEIGADDIP-- 314 Query: 271 KKIEIVGLSQIDTVDSD 287 +++ +++D + +D Sbjct: 315 ---QLLVFNKVDAISAD 328 >gi|226941958|ref|YP_002797032.1| ferrous iron transport protein B [Laribacter hongkongensis HLHK9] gi|226716885|gb|ACO76023.1| ferrous iron transport protein B [Laribacter hongkongensis HLHK9] Length = 764 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 35/67 (52%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G PN GK+T ++T A ++ ++P T+ LG + + L D+PG Sbjct: 6 LALVGNPNCGKTTLFNALTGAHQRVGNWPGITVERKLGHFSVDGQPYDLVDLPGTYAIDS 65 Query: 222 QGAGIGD 228 Q AGI + Sbjct: 66 QNAGISE 72 >gi|261856598|ref|YP_003263881.1| GTP-binding proten HflX [Halothiobacillus neapolitanus c2] gi|261837067|gb|ACX96834.1| GTP-binding proten HflX [Halothiobacillus neapolitanus c2] Length = 440 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKN- 219 + ++G NAGKST ++T A AD F TL L ++ E +LAD G I++ Sbjct: 203 VSLVGYTNAGKSTLFNALTEAGTFAADQLFATLDTTLRRLEFAPGEPMVLADTVGFIRHL 262 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 H+ L+ T +L+H+V A Sbjct: 263 PHELVTAFRSTLEETLEADLLIHVVDA 289 >gi|78043216|ref|YP_358984.1| GTP-binding protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995331|gb|ABB14230.1| GTP-binding protein [Carboxydothermus hydrogenoformans Z-2901] Length = 414 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 26/174 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + ++G NAGKST L ++T A D F TL P + + G ++ +L D G I+N Sbjct: 193 VALVGYTNAGKSTLLNALTGAGVLAEDKLFATLDPTVRKLTLPGGQKLLLIDTVGFIEN- 251 Query: 221 HQGAGIGDRFLKHTERTH---VLLHIV---SALEENVQAAYQCILDELSAYNSELRKKIE 274 I + F E H ++LH+V + E +A + IL +E++ ++ Sbjct: 252 -MPPLIKEAFKSTLEVVHEAELILHVVDGANPYREEQEAVVEKIL-------TEMKVRVP 303 Query: 275 IVGL-SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 ++ + +++D + L K +A S+ TG+ + +L+ + + +F Sbjct: 304 VITVYNKVDLLPEPVLFLGKRAVA---------ISARTGYNMELLLKLIEENLF 348 >gi|229552355|ref|ZP_04441080.1| GTP-binding protein Era [Lactobacillus rhamnosus LMS2-1] gi|258539726|ref|YP_003174225.1| GTP-binding protein era [Lactobacillus rhamnosus Lc 705] gi|229314337|gb|EEN80310.1| GTP-binding protein Era [Lactobacillus rhamnosus LMS2-1] gi|257151402|emb|CAR90374.1| GTP-binding protein era [Lactobacillus rhamnosus Lc 705] Length = 300 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 11/165 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ + K I T + GI + + D PGI K Sbjct: 9 VAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGIHKPK 68 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 ++ D+ L + +L +V+A +E A IL +L +E++K + ++ L+ Sbjct: 69 NELDDYMDKAALSTLNQVDAILFMVAA-DEQKGAGDAYILRQL----AEVKKPVYLI-LN 122 Query: 280 QIDTVDSDTLAR--KKNELATQCGQVPFEFSSITGHGIPQILECL 322 +ID V D L + + QV F S+ G+ + ++L L Sbjct: 123 KIDLVKPDDLLPLIESYQHDYHFAQV-FPISATMGNSVDELLNSL 166 >gi|168064687|ref|XP_001784291.1| predicted protein [Physcomitrella patens subsp. patens] gi|162664167|gb|EDQ50897.1| predicted protein [Physcomitrella patens subsp. patens] Length = 300 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 9/94 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PNAGKST L + K I + P TT + LGI + +L D PG+I Sbjct: 5 VALVGKPNAGKSTLLNQIIGQKLSIVTNKPQTTRHRILGICSGPDYQMVLYDTPGVISKQ 64 Query: 221 HQGAGIGDRFLKHTERTHVL-----LHIVSALEE 249 + D + RT L L +V A E+ Sbjct: 65 VKKL---DEMMMRNVRTATLNADCVLIVVDACEQ 95 >gi|238788977|ref|ZP_04632767.1| Ferrous iron transport protein B [Yersinia frederiksenii ATCC 33641] gi|238723004|gb|EEQ14654.1| Ferrous iron transport protein B [Yersinia frederiksenii ATCC 33641] Length = 790 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 17/164 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 IG+IG PNAGK+T +T A+ ++ ++ T+ G + L D+PG + Sbjct: 25 IGLIGNPNAGKTTLFNQLTGARQRVGNWAGVTVERKEGHFNTPQHQVTLVDLPGTYSLTT 84 Query: 220 AHQGAGIGDRFLKH---TERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + + ++ H + +L++++ A LE N+ Q I EL Sbjct: 85 ISEQTSLDEQIACHYILSGEADLLINVIDAANLERNLYLTLQLI---------ELGIPC- 134 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 IV L+ +D S + + L+ Q G S G GI ++ Sbjct: 135 IVALNMLDIAKSQHIDIDIDALSAQLGCPVIPLVSTRGRGINEL 178 >gi|284048237|ref|YP_003398576.1| ferrous iron transport protein B [Acidaminococcus fermentans DSM 20731] gi|283952458|gb|ADB47261.1| ferrous iron transport protein B [Acidaminococcus fermentans DSM 20731] Length = 693 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 3/92 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 IG IG PN GK+T + T A K+A++P T+ G ++ L D+PG + Sbjct: 19 IGFIGNPNCGKTTLFNAFTGANLKVANWPGVTVEKVEGAIRRHNMNIHLVDLPGTYSLTS 78 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEEN 250 + I R ++ V++++V SALE + Sbjct: 79 YTMEEIVSRDFILSDEVDVIINVVDASALERS 110 >gi|251772615|gb|EES53180.1| GTP-binding protein (Era) [Leptospirillum ferrodiazotrophum] Length = 335 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 22/136 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++GLPNAGKST + ++ K ++ P TT GI E + I D PG Sbjct: 34 VAVVGLPNAGKSTLVNALVGEKVSAVSATPQTTRTLIRGIRTEERGQAIFLDTPGF---- 89 Query: 221 HQGAGI-----GDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA-------YNSE 268 HQ + G+R HV+L +V + + LD + A N Sbjct: 90 HQSGPLLNQQMGERLSAALAEAHVVLWVVDITSKKRDRDFARFLDLIRAPRRGEGGANPP 149 Query: 269 LRKKIEIVGLSQIDTV 284 L IV L++ID + Sbjct: 150 L-----IVALTKIDRL 160 >gi|126726094|ref|ZP_01741936.1| GTP-binding protein Era [Rhodobacterales bacterium HTCC2150] gi|126705298|gb|EBA04389.1| GTP-binding protein Era [Rhodobacterales bacterium HTCC2150] Length = 302 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 + +IG PNAGKST L + AK I + T + GI EG + + D PG+ + Sbjct: 9 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGISIEGDSQIVFVDTPGLFR 66 >gi|332163334|ref|YP_004299911.1| ferrous iron transport protein B [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667564|gb|ADZ44208.1| ferrous iron transport protein B [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 771 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 17/164 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 IG+IG PNAGK+T +T A+ ++ ++ T+ G + L D+PG + Sbjct: 6 IGLIGNPNAGKTTLFNQLTGARQRVGNWAGVTVERKEGHFSTAQHQVTLVDLPGTYSLTT 65 Query: 220 AHQGAGIGDRFLKH---TERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + + ++ H + +L+++V A LE N+ Q I EL Sbjct: 66 ISEQTSLDEQIACHYILSGEADLLINVVDAANLERNLYLTLQLI---------ELGIPC- 115 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 +V L+ +D S + L+ Q G S G GI ++ Sbjct: 116 VVALNMLDIAKSQHIDIDIEALSQQLGCPVIPLVSTRGQGINEL 159 >gi|311276356|ref|XP_003135166.1| PREDICTED: guanine nucleotide-binding protein-like 3-like protein-like [Sus scrofa] Length = 775 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGY-KEFI-LADIPGIIK 218 +G++GLPN GKS+ + S+ R++ + P T + ++E Y +FI L D PGI+ Sbjct: 448 VGVVGLPNVGKSSLINSLKRSRACSVGAVPGVTKF-----MQEVYLDKFIRLLDAPGIVP 502 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + G L++ + L V+ +E +Q +C +E+S+Y Sbjct: 503 GPNSEVGT---ILRNCIQVQKLADPVTPVETILQ---RCNQEEISSY 543 >gi|254479662|ref|ZP_05092962.1| ferrous iron transport protein B, putative [Carboxydibrachium pacificum DSM 12653] gi|214034403|gb|EEB75177.1| ferrous iron transport protein B, putative [Carboxydibrachium pacificum DSM 12653] Length = 624 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 13/145 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAH 221 ++G PN GKS FL ++T AK +++YP TT+ G K G + + D PGI + + Sbjct: 3 LVGQPNVGKSLFLNTLTGAKVIVSNYPGTTVDVTEGRTKVGDESWEFVDTPGIYSLTPSS 62 Query: 222 QGAGIGDRFLKHTERTHVLLHIVS--ALEENVQAAYQC------ILDELSAYNSELRK-- 271 + + R + V +HI+ ALE N+ + Q + ++ Y L+K Sbjct: 63 EEEKVTYRIVLEGNYDFV-IHILDALALERNLIISLQLAELGVPFMIAVNFYEEALKKGM 121 Query: 272 KIEIVGLSQIDTVDSDTLARKKNEL 296 KI++ L ++ V + K E+ Sbjct: 122 KIDLRALEELLGVPVVVINPFKKEI 146 >gi|103486757|ref|YP_616318.1| GTP-binding protein, HSR1-related [Sphingopyxis alaskensis RB2256] gi|98976834|gb|ABF52985.1| GTP-binding protein, HSR1-related [Sphingopyxis alaskensis RB2256] Length = 432 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 18/168 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 I ++G NAGKSTF +T + D F TL P + ++ G + IL+D G + + Sbjct: 194 IALVGYTNAGKSTFFNRLTGSDVMAEDMLFATLDPTMREIRLPGIDKAILSDTVGFVSDL 253 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQ---CILDEL---------SAYNS 267 R L+ +++H+ + + A Y+ ILD L A + Sbjct: 254 PTELVAAFRATLEEVTTADLIVHVRDIVHPDTDAQYEDVRAILDSLGVNGPQDGEGADTA 313 Query: 268 ELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 +IEI +++DT + D A ++A + V S+ TG G+ Sbjct: 314 SAIPQIEI--WNKVDTANVDRRA-AIEDMAARRSDVAI-ISAATGEGV 357 >gi|317470564|ref|ZP_07929952.1| ferrous iron transporter B [Anaerostipes sp. 3_2_56FAA] gi|316902079|gb|EFV24005.1| ferrous iron transporter B [Anaerostipes sp. 3_2_56FAA] Length = 727 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN+GK+T ++T + + ++P T+ G +K GYK+ + D+PGI + Sbjct: 5 IALAGNPNSGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLK-GYKDVTIMDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ER +L+IV + +E N+ + Q + EL + I+ + Sbjct: 64 YTLEEVVARNYLIGERPDAILNIVDGTNIERNLYLSTQLM---------ELGIPV-IMAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D ++ +L+ + G E S++ G GI + E Sbjct: 114 NMMDVLEKSGDQIHIKQLSEKLGCEVTEISALKGTGIKKAAE 155 >gi|256074396|ref|XP_002573511.1| nucleolar GTP-binding protein [Schistosoma mansoni] gi|238658692|emb|CAZ29743.1| nucleolar GTP-binding protein, putative [Schistosoma mansoni] Length = 672 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 30/56 (53%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I + G PN GKS+F+ +TRA + +PFTT +G + + D PG++ Sbjct: 171 IILCGFPNVGKSSFINKITRADVDVQPFPFTTKSLFVGHTDYKNLRWQVIDTPGVL 226 >gi|123444174|ref|YP_001008144.1| ferrous iron transport protein B [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122091135|emb|CAL14018.1| ferrous iron transport protein B [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 771 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 17/164 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 IG+IG PNAGK+T +T A+ ++ ++ T+ G + L D+PG + Sbjct: 6 IGLIGNPNAGKTTLFNQLTGARQRVGNWAGVTVERKEGHFSTAQHQVTLVDLPGTYSLTT 65 Query: 220 AHQGAGIGDRFLKH---TERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + + ++ H + +L+++V A LE N+ Q I EL Sbjct: 66 ISEQTSLDEQIACHYILSGEADLLINVVDAANLERNLYLTLQLI---------ELGIPC- 115 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 +V L+ +D S + L+ Q G S G GI ++ Sbjct: 116 VVALNMLDIAKSQHIDIDIEALSQQLGCPVIPLVSTRGQGINEL 159 >gi|78777955|ref|YP_394270.1| ferrous iron transport protein B [Sulfurimonas denitrificans DSM 1251] gi|78498495|gb|ABB45035.1| Ferrous iron transport protein B [Sulfurimonas denitrificans DSM 1251] Length = 711 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/179 (22%), Positives = 82/179 (45%), Gaps = 17/179 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I ++G PN GKS + S+++A + ++ T+ + + F + D+PG A Sbjct: 17 IALVGQPNVGKSMLINSISKANLHVGNFTGVTVEKSEVLFDYKDYHFTVVDLPG--TYAL 74 Query: 222 QGAGIGDRFLK---HTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIV 276 I +R + E +++++V + LE+N+Q L+A + KKI ++ Sbjct: 75 SEYSIEERVTTDYLYKEHYDLIVNVVDSTNLEKNLQ---------LTAELMSIGKKI-VI 124 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 L+ D + + +++ G + S+ T GI +++ L D+ S + EN+ Sbjct: 125 ALNMSDEAQKEGIEIDDKQMSLILGITCIKVSAATKFGIETLIKALIDEFESEKIENKL 183 >gi|226325449|ref|ZP_03800967.1| hypothetical protein COPCOM_03254 [Coprococcus comes ATCC 27758] gi|225206192|gb|EEG88546.1| hypothetical protein COPCOM_03254 [Coprococcus comes ATCC 27758] Length = 414 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 18/169 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + I+G NAGKST L ++T A D F TL P K +E +L D G I+ Sbjct: 204 VAIVGYTNAGKSTLLNTLTGAGVLQEDQLFATLDPTTRSRKLPSGQEILLTDTVGFIRKL 263 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKIEI 275 H L+ + ++LH+V A ++E + Y+ L L A + + + Sbjct: 264 PHHLIDAFKSTLEEAKYADLILHVVDASNPQMDEQMYVVYET-LQRLEAMDKPV-----V 317 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 +++D + R A + QV S+ TG G+ +L+ + + Sbjct: 318 TAFNKMDRIGESLTVRDFK--ADRIVQV----SAKTGEGLEALLQAIEE 360 >gi|199599319|ref|ZP_03212717.1| GTPase [Lactobacillus rhamnosus HN001] gi|258508545|ref|YP_003171296.1| GTP-binding protein era [Lactobacillus rhamnosus GG] gi|199589758|gb|EDY97866.1| GTPase [Lactobacillus rhamnosus HN001] gi|257148472|emb|CAR87445.1| GTP-binding protein era [Lactobacillus rhamnosus GG] gi|259649852|dbj|BAI42014.1| GTP-binding protein Era [Lactobacillus rhamnosus GG] Length = 300 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 11/165 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKSTF+ + K I T + GI + + D PGI K Sbjct: 9 VAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGIHKPK 68 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 ++ D+ L + +L +V+A +E A IL +L +E++K + ++ L+ Sbjct: 69 NELDDYMDKAALSTLNQVDAILFMVAA-DEQKGAGDAYILRQL----AEVKKPVYLI-LN 122 Query: 280 QIDTVDSDTLAR--KKNELATQCGQVPFEFSSITGHGIPQILECL 322 +ID V D L + + QV F S+ G+ + ++L L Sbjct: 123 KIDLVKPDDLLPLIESYQHDYHFAQV-FPISATMGNNVDELLNSL 166 >gi|26987593|ref|NP_743018.1| GTP-binding protein EngA [Pseudomonas putida KT2440] gi|37999649|sp|Q88PJ3|DER_PSEPK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|24982270|gb|AAN66482.1|AE016277_1 GTP-binding protein EngA [Pseudomonas putida KT2440] Length = 487 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 11/167 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +T+ + I D T G + FIL D GI Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGI 60 Query: 217 I-KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + ++ L E +L +V A + AA Q I + L R K I Sbjct: 61 TGDEVGMDEKMAEQSLMAIEEADYVLFLVDA-RAGMTAADQMIAEHLRK-----RNKAAI 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + ++ID +D D +AR + +P S G GI ++E + Sbjct: 115 LVANKIDNIDPD-VARAEFSPMGMGNAIPVAGSQ--GRGINALMEAV 158 >gi|229829322|ref|ZP_04455391.1| hypothetical protein GCWU000342_01409 [Shuttleworthia satelles DSM 14600] gi|229792485|gb|EEP28599.1| hypothetical protein GCWU000342_01409 [Shuttleworthia satelles DSM 14600] Length = 444 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 22/170 (12%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNAH 221 I+G NAGKST L ++T A D F TL IV G E +L D G I+ Sbjct: 233 AIVGYTNAGKSTLLNALTGAGVLAQDILFATLDTTTRIVDLGGSETMLLTDTVGFIRKLP 292 Query: 222 QGAGIGDRF---LKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKIE 274 G+ D F L+ + ++ +V A +EE + Q LDEL N KKI Sbjct: 293 H--GLIDAFRSTLEEAKYADYIIQLVDASDPDMEERMHVVRQT-LDELGVKN----KKI- 344 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 + ++ D ++ D + C S+ TG G+ ++ + L D Sbjct: 345 LTLFNKCDRLEEDLSLHDFRADKSLC------ISARTGMGLHEVRQALAD 388 >gi|227328671|ref|ZP_03832695.1| GTP-binding protein EngA [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 495 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 17/170 (10%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D GI Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIVDTGGI 60 Query: 217 IKNAHQGAGIGDRF----LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G+ R L E ++L +V A + A DE A + R+K Sbjct: 61 DGTED---GVETRMAGQSLVAIEEADIVLFMVDARAGLMPA------DEGIAKHLRSREK 111 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 ++ ++ D +D D + L G+V + ++ G G+ +LE + Sbjct: 112 TTVLVANKTDGLDPDMVTADFYSLG--MGEV-YAIAASHGRGVTSLLETV 158 >gi|227543022|ref|ZP_03973071.1| GTP-binding protein Era [Corynebacterium glucuronolyticum ATCC 51866] gi|227181244|gb|EEI62216.1| GTP-binding protein Era [Corynebacterium glucuronolyticum ATCC 51866] Length = 308 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 80/174 (45%), Gaps = 18/174 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +G PN GKST ++ K I A+ P TT +P GIV + I+ D PG+ + Sbjct: 20 VSFVGRPNTGKSTLTNALVGQKIAITANQPETTRHPIRGIVHRDDAQVIVVDTPGLHRPR 79 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 +G+R + + T+ + +++ +E + + ILD + + K ++G Sbjct: 80 ---TLLGERLNEQVKETYADVDVIALTIPADEKIGPGDRWILDAV----RNVAPKTTLIG 132 Query: 278 -LSQIDTVDSDTLARKKNELAT----QCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D + + L +C VP S++ + + + + DK+ Sbjct: 133 VVTKIDKVGRDQVMVQLQALHELLGGECEVVP--CSAVKQEQLDVLTDVIVDKL 184 >gi|154249358|ref|YP_001410183.1| GTP-binding protein Era [Fervidobacterium nodosum Rt17-B1] gi|154153294|gb|ABS60526.1| GTP-binding protein Era [Fervidobacterium nodosum Rt17-B1] Length = 301 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 80/163 (49%), Gaps = 12/163 (7%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ- 222 +G PN GKS+ + ++ + K I ++ P TT I + + D PGI K H+ Sbjct: 12 VGKPNVGKSSIINAIMKKKVVIVSEKPQTTRNRINVIYTTDDFQIVFVDTPGIHKPLHRL 71 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE---LRKKIEIVGLS 279 G + ++ + +LL V A +E + + I++ ++ + + KI++V Sbjct: 72 GEYMVKAAVQALKNVDLLLFTVDA-KEGFETPEEYIIEYVNQSKTPVIGVINKIDLVDRE 130 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 +ID+++ + RKK E + + S++TG G+ ++LE + Sbjct: 131 RIDSIEE--IMRKKVENLKEVVKT----SAVTGEGLDKLLEVI 167 >gi|218889917|ref|YP_002438781.1| GTP-binding protein EngA [Pseudomonas aeruginosa LESB58] gi|226741143|sp|B7UWJ2|DER_PSEA8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|218770140|emb|CAW25902.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa LESB58] Length = 493 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 9/136 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +T+++ I A+Y T G + + +I+ D GI Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEARWQGRTYIVIDTGGI 60 Query: 217 IKNAHQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + A + ++ L+ E +L +V + + AA Q I + L R K Sbjct: 61 SGDEEGIDAKMAEQSLQAIEEADAVLFLVDS-RAGMTAADQMIAEHLRK-----RNKRSF 114 Query: 276 VGLSQIDTVDSDTLAR 291 + +++DT+D D LAR Sbjct: 115 LIANKVDTIDPD-LAR 129 >gi|332358725|gb|EGJ36548.1| GTP-binding protein Era [Streptococcus sanguinis SK355] Length = 299 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVEAAYSTLREVDTVLFMVPA-DEPRGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLAQIDDFRQQMDFKEIVP--ISALQGNNVSRLVDILSENL 169 >gi|323704137|ref|ZP_08115716.1| GTP-binding proten HflX [Thermoanaerobacterium xylanolyticum LX-11] gi|323536203|gb|EGB25975.1| GTP-binding proten HflX [Thermoanaerobacterium xylanolyticum LX-11] Length = 412 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 2/99 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + IIG NAGKST + +T A D F TL P ++ +E +L D G I+ Sbjct: 200 VAIIGYTNAGKSTLMNVLTNASVYAEDKLFATLDPTARKLILPSGREIVLIDTVGFIRKL 259 Query: 221 -HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCI 258 H L+ + VLLH++ ++V + Sbjct: 260 PHDLVEAFKSTLEELKYADVLLHVIDISAKDVMHKINVV 298 >gi|312793776|ref|YP_004026699.1| small gtp-binding protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180916|gb|ADQ41086.1| small GTP-binding protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 609 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 4/55 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 I ++G PN GKS +T ++++YP TT+ N G YK++++ D PG+ Sbjct: 21 IALVGNPNVGKSVIFNKLTGRYVEVSNYPGTTVDVNYGF----YKDYVIVDTPGV 71 >gi|262184631|ref|ZP_06044052.1| GTP-binding protein Era [Corynebacterium aurimucosum ATCC 700975] Length = 331 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + +G PN GKST ++ K I AD P TT +P G+V + +L D PG+ Sbjct: 38 VSFVGRPNTGKSTLTNALVGQKIAITADQPETTRHPIRGLVHREDAQIVLVDTPGL 93 >gi|163849524|ref|YP_001637567.1| GTP-binding proten HflX [Methylobacterium extorquens PA1] gi|163661129|gb|ABY28496.1| GTP-binding proten HflX [Methylobacterium extorquens PA1] Length = 474 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 75/183 (40%), Gaps = 16/183 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE-FILADIPGIIKNA 220 + ++G NAGKST ++T A+ D F TL P K + E IL+D G I + Sbjct: 233 VALVGYTNAGKSTLFNALTEAQVVAQDMLFATLDPTARATKLPHGETVILSDTVGFISDL 292 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQ---CILDELSAYNSELRKKIEIV 276 R L+ +LLH+ + +A + +LDEL S + IE+ Sbjct: 293 PTALIAAFRATLEDVIEADILLHVRDISHADTEAQAEDVGHVLDEL-GIRSHADRIIEV- 350 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQV--------PFEFSSITGHGIPQILECLHDKIFS 328 ++ D +D R N + GQ P S++TG G+ + + +I Sbjct: 351 -WNKADVLDKAERTRLLNLSSKGEGQTRNDHDSSAPVLVSALTGEGLSALTSRIEARIAR 409 Query: 329 IRG 331 R Sbjct: 410 SRS 412 >gi|149277443|ref|ZP_01883584.1| GTP-binding protein [Pedobacter sp. BAL39] gi|149231676|gb|EDM37054.1| GTP-binding protein [Pedobacter sp. BAL39] Length = 292 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + IIG PN GKST + ++ K I TT + LGIV E + + +D PGIIK Sbjct: 8 VSIIGKPNVGKSTLMNALIGEKLSIITPKAQTTRHRILGIVNEEEYQIVFSDTPGIIK 65 >gi|145628971|ref|ZP_01784770.1| GTP-binding protein EngA [Haemophilus influenzae 22.1-21] gi|144978474|gb|EDJ88197.1| GTP-binding protein EngA [Haemophilus influenzae 22.1-21] Length = 504 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 18/165 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTL---YPNLGIVKEGYKEFILADIPGII 217 + ++G PN GKST +TR + +AD+P T Y + IV GY +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHIV--GY-DFIVIDTGG-I 61 Query: 218 KNAHQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 +G + ++ L + ++L +V A +A ++ Y + + KI + Sbjct: 62 DGTEEGVEEKMAEQSLLAIDEADIVLFLVDA-----RAGLTAADIGIANYLRQRQNKITV 116 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V ++ D +D+D+ + +L G++ + ++ G G+ Q++E Sbjct: 117 VVANKTDGIDADSHCAEFYQLG--LGEIE-QIAASQGRGVTQLME 158 >gi|126465814|ref|YP_001040923.1| small GTP-binding protein [Staphylothermus marinus F1] gi|126014637|gb|ABN70015.1| small GTP-binding protein [Staphylothermus marinus F1] Length = 368 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 24/186 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP-NLGIVKEGYKEFILADIPGIIKN- 219 I I+G AGK+T +T PFTTL P + I+ +G K IL D G I++ Sbjct: 181 ISIVGYTCAGKTTLFNRLTHNLKPAGPEPFTTLSPKSSAIIIDGLK-MILTDTVGFIRDL 239 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE----- 274 H+ L+ +++++H++ A + + I+ E+ E R+ E Sbjct: 240 PHEIIEAFYATLEEIIDSNIIIHVIDA-----SKSSEAIIKEM----VETRRIFERIGVH 290 Query: 275 ----IVGLSQIDTVDSDTLARKKNELATQC---GQVPFEFSSITGHGIPQILECLHDKIF 327 I+ L++ID ++S+ K L + V S+I G I +L L + I Sbjct: 291 GIPIIIALNKIDLLNSEEEIMDKIRLVEKYIDGNNVIVPISAINGKNIRYLLNVLKEIIR 350 Query: 328 SIRGEN 333 EN Sbjct: 351 GYSIEN 356 >gi|304389932|ref|ZP_07371889.1| GTP-binding protein Era [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315657184|ref|ZP_07910068.1| GTP-binding protein Era [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|304326825|gb|EFL94066.1| GTP-binding protein Era [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492287|gb|EFU81894.1| GTP-binding protein Era [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 333 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 58/145 (40%), Gaps = 29/145 (20%) Query: 163 GIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK--- 218 +IG PN GKST + A V R +D P TT GIV + IL D PGI + Sbjct: 43 AVIGRPNVGKSTLINAMVGRKIAITSDRPETTRRVARGIVHRPDFQLILVDTPGIHRPRT 102 Query: 219 ------------------------NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A Q G GDR + T+ ++ + + A+ Sbjct: 103 LLGQRLNDMVDDAFSEVDVAVFCVPADQPIGPGDRRIVETQLKTAHFPAIAVVTKTDAAS 162 Query: 255 YQCILDELSAYNSELRKKIEIVGLS 279 + I ++L A S+L EIV +S Sbjct: 163 REQIAEQLLAV-SQLHDFAEIVPIS 186 >gi|270013135|gb|EFA09583.1| hypothetical protein TcasGA2_TC011700 [Tribolium castaneum] Length = 325 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + H+ A E++ V+ + D L Sbjct: 15 IVDIAGLVKGASEGQGLGNAFLSHISACDAIFHLCRAFEDDDVTHVEGEVNPVRD-LDII 73 Query: 266 NSELRKKIEIVGLSQIDTVDSDTL 289 ELR K E L ++ ++ L Sbjct: 74 AEELRLKDEDTLLKNMEKLERTVL 97 >gi|262304281|gb|ACY44733.1| GTP-binding protein [Phrynus marginemaculatus] Length = 280 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + H+ E++ V+ I D ++ Sbjct: 35 VVDIAGLVKGASEGQGLGNAFLSHIRACDAIFHLCRVFEDDNVSHVEGDVNPIRD-INII 93 Query: 266 NSELRKKIEIVGLSQIDTVDSDTL 289 N ELR K E L+ I+ ++ L Sbjct: 94 NEELRLKDEEYLLTLIEKLERTVL 117 >gi|126728498|ref|ZP_01744314.1| GTP-binding protein Era [Sagittula stellata E-37] gi|126711463|gb|EBA10513.1| GTP-binding protein Era [Sagittula stellata E-37] Length = 302 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 I +IG PNAGKST + AK I + T + G+ EG + I D PG+ + Sbjct: 8 IALIGEPNAGKSTLTNRMVGAKVSIVTHKVQTTRARIRGVAMEGDSQLIFVDTPGLFQ 65 >gi|157151336|ref|YP_001450014.1| GTP-binding protein Era [Streptococcus gordonii str. Challis substr. CH1] gi|3334174|sp|O24756|ERA_STRGC RecName: Full=GTPase Era gi|2627217|dbj|BAA23582.1| GTP-binding protein [Streptococcus gordonii] gi|157076130|gb|ABV10813.1| GTP-binding protein Era [Streptococcus gordonii str. Challis substr. CH1] Length = 299 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVEAAYSTLREVDTVLFMVPA-DEPRGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLAQIDDFRQQMDFKEIVP--ISALQGNNVSRLVDILSENL 169 >gi|332022772|gb|EGI63045.1| DNA ligase 1 [Acromyrmex echinatior] Length = 914 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 37/164 (22%), Positives = 73/164 (44%), Gaps = 10/164 (6%) Query: 162 IGIIGLPNAGKSTFLAS-VTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 I +G PN GKST + + R+ ++ TT I EG + I D PG++ Sbjct: 56 IAFLGAPNVGKSTLVNQLIKRSICPVSCKVHTTQTKAHAIYCEGDTQLIFMDTPGMVSLT 115 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALE--ENVQAAYQCILDELSAYNSELRKKIEIV- 276 + + D F K + + + I+ ++ EN+ ++ + L +++KKI I+ Sbjct: 116 ESKKFKLADSFRKDQKTSLNMADIIGIVQNAENIYTRHKIDSNILELLTEDIKKKIPIIL 175 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVP-----FEFSSITGHGI 315 ++++D + + T+ + P F S++TG G+ Sbjct: 176 VINKVDRIKKKEILLDFVYTLTKSKKSPDFCDVFMISALTGDGV 219 >gi|320534514|ref|ZP_08034972.1| ferrous iron transport protein B [Actinomyces sp. oral taxon 171 str. F0337] gi|320133269|gb|EFW25759.1| ferrous iron transport protein B [Actinomyces sp. oral taxon 171 str. F0337] Length = 709 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 30/54 (55%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 + + G PNAGK++ ++T K +YP T+ +LG K G K + D+PG Sbjct: 43 VALAGAPNAGKTSIYNALTGLHAKTGNYPGVTVQRSLGTCKVGGKTLTIEDLPG 96 >gi|312877864|ref|ZP_07737811.1| small GTP-binding protein [Caldicellulosiruptor lactoaceticus 6A] gi|311795368|gb|EFR11750.1| small GTP-binding protein [Caldicellulosiruptor lactoaceticus 6A] Length = 609 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 4/55 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 I ++G PN GKS +T ++++YP TT+ N G YK++++ D PG+ Sbjct: 21 IALVGNPNVGKSVIFNKLTGRYVEVSNYPGTTVDVNYGF----YKDYVIVDTPGV 71 >gi|307109793|gb|EFN58030.1| hypothetical protein CHLNCDRAFT_20741 [Chlorella variabilis] Length = 306 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 7/97 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PNAGKST + ++ + K I TT + LGI+ E + + D PGII + Sbjct: 19 VAIIGRPNAGKSTLMNALLQQKLSIVTPKAQTTRHRILGILSEPGFQAVFLDTPGIIVDK 78 Query: 221 HQGAGIGDRFLKHTER----THVLLHIVSALEENVQA 253 + D+ + ++ LL IV A E QA Sbjct: 79 RN--KLEDKMMASVQQAVRDADCLLAIVDASHEPQQA 113 >gi|291444476|ref|ZP_06583866.1| GTP-binding protein Era [Streptomyces roseosporus NRRL 15998] gi|291347423|gb|EFE74327.1| GTP-binding protein Era [Streptomyces roseosporus NRRL 15998] Length = 321 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 11/150 (7%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I ++ P TT + GIV + IL D PG+ K Sbjct: 28 VGRPNAGKSTLTNALVGQKVAITSNRPQTTRHTVRGIVHRDDAQLILVDTPGLHKPR--- 84 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ ++ + + I+ EL+ ++K +I +++ Sbjct: 85 TLLGERLNDVVRTTWAEVDVIGFCLPADQKLGPGDKYIVKELAG----IKKTPKIAIITK 140 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEFSSI 310 D V+S LA + ++ ++ FE++ I Sbjct: 141 TDLVESKALAEQLLAVSALAEELGFEWAEI 170 >gi|194758196|ref|XP_001961348.1| GF11042 [Drosophila ananassae] gi|190622646|gb|EDV38170.1| GF11042 [Drosophila ananassae] Length = 381 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I +IG+PN GKSTF+ + K + TT N I +G + + D PG++ Sbjct: 62 IAVIGVPNVGKSTFINHIVNHKVCPTSTKVHTTRQSNTAICTQGQTQLVFYDTPGLV 118 >gi|189502569|ref|YP_001958286.1| hypothetical protein Aasi_1232 [Candidatus Amoebophilus asiaticus 5a2] gi|189498010|gb|ACE06557.1| hypothetical protein Aasi_1232 [Candidatus Amoebophilus asiaticus 5a2] Length = 395 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 5/105 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + + ++G N GKST + ++++ + D F T+ + V + F+L D G I+ Sbjct: 202 LVRVALVGYTNVGKSTLMHLLSKSDAYVEDKLFATITSTVRRVVINHIPFLLTDTVGFIR 261 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVS----ALEENVQAAYQCI 258 H L +LLH+V A EE++Q Q + Sbjct: 262 KLPHTLIESFKSTLDEIREADILLHVVDASHPACEEHIQVVQQTL 306 >gi|91788464|ref|YP_549416.1| GTP-binding protein, HSR1-like protein [Polaromonas sp. JS666] gi|91697689|gb|ABE44518.1| GTP-binding protein HflX [Polaromonas sp. JS666] Length = 386 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 29/187 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFILADIPGIIKN 219 I ++G NAGKST ++ +A+ AD F TL + + + L+D G I++ Sbjct: 197 ISLVGYTNAGKSTLFNALVKARAYAADQLFATLDTTTRQLYLGDAARSVSLSDTVGFIRD 256 Query: 220 AHQGAGIGDRF---LKHTERTHVLLHIVSA-----LEENVQAAYQCILDELSAYNSELRK 271 G+ D F L+ +LLH+V LE+ Q Q +L E+ A + Sbjct: 257 LPH--GLIDAFAATLQEAADADLLLHVVDGSNPDYLEQIEQV--QRVLAEIGAADVP--- 309 Query: 272 KIEIVGLSQIDTVD---SDTLARKKNEL------ATQCGQVPFEFSSITGHGIPQILECL 322 +I+ +++D V+ S R EL A++ F S++TG G+P + E L Sbjct: 310 --QILVFNKLDAVEKGNSPLSLRDMFELRDAFEGASRSVDRVF-VSALTGEGLPLLRELL 366 Query: 323 HDKIFSI 329 + S+ Sbjct: 367 ASHVASM 373 >gi|146319051|ref|YP_001198763.1| GTP-binding protein Era [Streptococcus suis 05ZYH33] gi|146321257|ref|YP_001200968.1| GTP-binding protein Era [Streptococcus suis 98HAH33] gi|223932650|ref|ZP_03624649.1| GTP-binding protein Era [Streptococcus suis 89/1591] gi|253752114|ref|YP_003025255.1| GTP-binding protein Era homolog [Streptococcus suis SC84] gi|253753939|ref|YP_003027080.1| GTP-binding protein Era homolog [Streptococcus suis P1/7] gi|253755186|ref|YP_003028326.1| GTP-binding protein Era homolog [Streptococcus suis BM407] gi|330832408|ref|YP_004401233.1| GTP-binding protein Era [Streptococcus suis ST3] gi|189037678|sp|A4W2H9|ERA_STRS2 RecName: Full=GTPase Era gi|189037680|sp|A4VW74|ERA_STRSY RecName: Full=GTPase Era gi|145689857|gb|ABP90363.1| GTPase [Streptococcus suis 05ZYH33] gi|145692063|gb|ABP92568.1| GTPase [Streptococcus suis 98HAH33] gi|223898620|gb|EEF64982.1| GTP-binding protein Era [Streptococcus suis 89/1591] gi|251816403|emb|CAZ52034.1| GTP-binding protein Era homolog [Streptococcus suis SC84] gi|251817650|emb|CAZ55398.1| GTP-binding protein Era homolog [Streptococcus suis BM407] gi|251820185|emb|CAR46552.1| GTP-binding protein Era homolog [Streptococcus suis P1/7] gi|292558696|gb|ADE31697.1| Small GTP-binding protein Era [Streptococcus suis GZ1] gi|319758490|gb|ADV70432.1| GTP-binding protein Era [Streptococcus suis JS14] gi|329306631|gb|AEB81047.1| GTP-binding protein Era [Streptococcus suis ST3] Length = 299 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTEEEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEKRGKGDDMIMERLKQAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S+ G+ + +++E L + + Sbjct: 119 VVNKIDKVHPDQLLEQIDDFRQQMDFKEIVP--ISATQGNNVNRLMEILKENL 169 >gi|318607827|emb|CBY29325.1| ferrous iron transport protein B [Yersinia enterocolitica subsp. palearctica Y11] Length = 771 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 17/164 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 IG+IG PNAGK+T +T A+ ++ ++ T+ G + L D+PG + Sbjct: 6 IGLIGNPNAGKTTLFNQLTGARQRVGNWAGVTVERKEGHFSTAQHQVTLVDLPGTYSLTT 65 Query: 220 AHQGAGIGDRFLKH---TERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + + ++ H + +L+++V A LE N+ Q I EL Sbjct: 66 ISEQTSLDEQIACHYILSGEADLLINVVDAANLERNLYLTLQLI---------ELGIPC- 115 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 +V L+ +D S + L+ Q G S G GI ++ Sbjct: 116 VVALNMLDIAKSQHIDIDIEALSQQLGCPVIPLVSTRGQGINEL 159 >gi|323343320|ref|ZP_08083547.1| GTP-binding protein Era [Prevotella oralis ATCC 33269] gi|323095139|gb|EFZ37713.1| GTP-binding protein Era [Prevotella oralis ATCC 33269] Length = 305 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 21/136 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + + K IA + TT + +GIV + + +D PG++K Sbjct: 19 VNIVGNPNVGKSTLMNQLVGEKISIATFKAQTTRHRIMGIVNTDDAQIVFSDTPGVLKPN 78 Query: 221 HQGAGIGDRFLKHTER----THVLLH---IVSALEENVQAAYQCILDELSAYNSELRKKI 273 ++ + + L +E VLL+ +V A E+N++ LD++ + Sbjct: 79 YK---LQESMLAFSESALTDADVLLYVTDVVEAPEKNIE-----FLDKVKKMTIPV---- 126 Query: 274 EIVGLSQIDTVDSDTL 289 ++ +++ID D TL Sbjct: 127 -LLLINKIDQTDQKTL 141 >gi|251792908|ref|YP_003007634.1| GTP-binding protein EngA [Aggregatibacter aphrophilus NJ8700] gi|247534301|gb|ACS97547.1| GTP-binding protein EngA [Aggregatibacter aphrophilus NJ8700] Length = 509 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHLAGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E ++L +V A +A ++ Y + + K +V Sbjct: 65 EEGVEEKMAEQSLLAIEEADIVLFLVDA-----RAGLTSADIGIANYLRQRQNKTTVVVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 +++D +D+D+ + +L G++ + ++ G GI ++E Sbjct: 120 NKVDGIDADSHCAEFYQLG--LGEIA-QIAASQGRGIANLME 158 >gi|194228582|ref|XP_001495993.2| PREDICTED: similar to Guanine nucleotide binding protein-like 3 (nucleolar)-like isoform 1 [Equus caballus] Length = 575 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGY-KEFI-LADIPGIIK 218 +G++GLPN GKS+ + S+ R++ + P T + ++E Y +FI L D PGI+ Sbjct: 248 VGVVGLPNVGKSSLINSLKRSRACSVGAVPGVTKF-----MQEVYLDKFIRLLDAPGIVP 302 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + G R H ++ L V+ +E +Q +C L+E+S Y Sbjct: 303 GPNSEVGTILRNCIHVQK---LGDPVTPVETILQ---RCNLEEISNY 343 >gi|156381162|ref|XP_001632135.1| predicted protein [Nematostella vectensis] gi|156219186|gb|EDO40072.1| predicted protein [Nematostella vectensis] Length = 383 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + + IIG PN+GKST + + K + + P TT + G+ G + IL D PG++ Sbjct: 80 LLKVAIIGEPNSGKSTLINQLVGEKIVAVTEKPHTTRQVSRGVFTSGGTQIILLDTPGLV 139 Query: 218 KNA 220 + Sbjct: 140 TQS 142 >gi|148655454|ref|YP_001275659.1| GTP-dependent nucleic acid-binding protein EngD [Roseiflexus sp. RS-1] gi|148567564|gb|ABQ89709.1| GTP-binding protein YchF [Roseiflexus sp. RS-1] Length = 360 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 17/105 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----------------KEG 204 I IIGL N+GK+T ++T + Y L PNL V K Sbjct: 3 IAIIGLANSGKTTVFNALTGGTAETTVYSSGQLTPNLATVKVPDSRLEVLARMFNPKKVT 62 Query: 205 YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 Y + DI G+ A + G+ L + LLH+V A ++ Sbjct: 63 YADVQYIDIGGLSSGARESGGLPPVVLNYISGADALLHVVRAFQD 107 >gi|309389847|gb|ADO77727.1| GTP-binding proten HflX [Halanaerobium praevalens DSM 2228] Length = 409 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 4/131 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII-KN 219 + I+G NAGKST + ++ A AD F TL + + + I++D G I K Sbjct: 191 VAIVGYTNAGKSTLINNLAAANSYTADKLFATLDSTMRKFELPVGQNIIISDTVGFISKL 250 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 HQ L+ E ++LH++ A +++ + + E+ K I++ + Sbjct: 251 PHQLIASFRTTLEEIENADLILHLIDASNSDIEKNIKIVNQEIRKLKKSKAKVIKV--FN 308 Query: 280 QIDTVDSDTLA 290 +ID + LA Sbjct: 309 KIDLIKKSKLA 319 >gi|309792496|ref|ZP_07686960.1| GTP-binding proten HflX [Oscillochloris trichoides DG6] gi|308225484|gb|EFO79248.1| GTP-binding proten HflX [Oscillochloris trichoides DG6] Length = 458 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 28/160 (17%) Query: 149 EKIIWLKLKL------------------IADIGIIGLPNAGKSTFLASVTRAKPKIADYP 190 ++I WLK +L + + ++G NAGKST L +++ A D Sbjct: 205 QRIAWLKEQLADVHRHRELYRQRRKGSGVPVVALVGYTNAGKSTLLNALSGADVLTQDQL 264 Query: 191 FTTLYPNL-GIVKEGYKEFILADIPGII-KNAHQGAGIGDRFLKHTERTHVLLHIVSALE 248 F TL P + G +L D G I K Q L+ +LLH+V Sbjct: 265 FATLDPTTRQVTLPGNHHILLTDTVGFIQKLPTQLVAAFRATLEEINEADLLLHVVDLTH 324 Query: 249 ENVQAAYQCI---LDELSAYNSELRKKIEIVGLSQIDTVD 285 N Q Q + L+EL + +K + L+++D ++ Sbjct: 325 PNAQEHAQTVEKTLEELG-----VSRKATLTVLNKVDKLE 359 >gi|259907678|ref|YP_002648034.1| GTP-binding protein Era [Erwinia pyrifoliae Ep1/96] gi|224963300|emb|CAX54785.1| GTP-binding protein [Erwinia pyrifoliae Ep1/96] gi|283477529|emb|CAY73445.1| GTP-binding protein Era [Erwinia pyrifoliae DSM 12163] Length = 301 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 IAIVGRPNVGKSTLLNQLLGQKVSITSRKPQTTRHRIMGIHTEGQYQAIYVDTPGL 66 >gi|331087033|ref|ZP_08336108.1| GTP-binding protein HflX [Lachnospiraceae bacterium 9_1_43BFAA] gi|330409483|gb|EGG88926.1| GTP-binding protein HflX [Lachnospiraceae bacterium 9_1_43BFAA] Length = 417 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 12/127 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 I I+G NAGKST L +T A D F TL P G+ +E +L D G I+ Sbjct: 203 IAIVGYTNAGKSTLLNRLTGASVLEEDKLFATLDPTTRGLKLPSGQEVLLTDTVGFIRKL 262 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKIEI 275 H L+ + ++LH+V ++E + Y+ + N +++ K+ I Sbjct: 263 PHHLIEAFKSTLEEAKYADMILHVVDVSNPQMDEQMYTVYETL------QNLDVKDKVVI 316 Query: 276 VGLSQID 282 ++ D Sbjct: 317 TAFNKQD 323 >gi|194228580|ref|XP_001496011.2| PREDICTED: similar to Guanine nucleotide binding protein-like 3 (nucleolar)-like isoform 2 [Equus caballus] Length = 582 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGY-KEFI-LADIPGIIK 218 +G++GLPN GKS+ + S+ R++ + P T + ++E Y +FI L D PGI+ Sbjct: 255 VGVVGLPNVGKSSLINSLKRSRACSVGAVPGVTKF-----MQEVYLDKFIRLLDAPGIVP 309 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + G R H ++ L V+ +E +Q +C L+E+S Y Sbjct: 310 GPNSEVGTILRNCIHVQK---LGDPVTPVETILQ---RCNLEEISNY 350 >gi|167745839|ref|ZP_02417966.1| hypothetical protein ANACAC_00533 [Anaerostipes caccae DSM 14662] gi|167654703|gb|EDR98832.1| hypothetical protein ANACAC_00533 [Anaerostipes caccae DSM 14662] Length = 727 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN+GK+T ++T + + ++P T+ G +K GYK+ + D+PGI + Sbjct: 5 IALAGNPNSGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLK-GYKDVTIMDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ER +L+IV + +E N+ + Q + EL + I+ + Sbjct: 64 YTLEEVVARNYLIGERPDAILNIVDGTNIERNLYLSTQLM---------ELGIPV-IMAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D ++ +L+ + G E S++ G GI + E Sbjct: 114 NMMDVLEKSGDQIHIKQLSEKLGCEVTEISALKGTGIKKAAE 155 >gi|330862989|emb|CBX73122.1| ferrous iron transport protein B [Yersinia enterocolitica W22703] Length = 781 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 17/164 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 IG+IG PNAGK+T +T A+ ++ ++ T+ G + L D+PG + Sbjct: 16 IGLIGNPNAGKTTLFNQLTGARQRVGNWAGVTVERKEGHFSTAQHQVTLVDLPGTYSLTT 75 Query: 220 AHQGAGIGDRFLKH---TERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + + ++ H + +L+++V A LE N+ Q I EL Sbjct: 76 ISEQTSLDEQIACHYILSGEADLLINVVDAANLERNLYLTLQLI---------ELGIPC- 125 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 +V L+ +D S + L+ Q G S G GI ++ Sbjct: 126 VVALNMLDIAKSQHIDIDIEALSQQLGCPVIPLVSTRGQGINEL 169 >gi|313206776|ref|YP_004045953.1| GTP-binding protein hflx [Riemerella anatipestifer DSM 15868] gi|312446092|gb|ADQ82447.1| GTP-binding protein HflX [Riemerella anatipestifer DSM 15868] gi|315023848|gb|EFT36850.1| GTP-binding protein HflX [Riemerella anatipestifer RA-YM] gi|325335785|gb|ADZ12059.1| HflX [Riemerella anatipestifer RA-GD] Length = 406 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 26/188 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + ++G N GKST + +++++ + F TL + V G F+L D G I+ Sbjct: 202 VALVGYTNVGKSTLMNVISKSEVFAENKLFATLDTTVRKVVIGNLPFLLTDTVGFIRKLP 261 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV----SALEENVQAAYQCILDELSAYNSELRKKIEIV 276 Q L +L+H+V + E+++++ Q IL E+ A+ +K I+ Sbjct: 262 TQLVESFKSTLDEVREADLLVHVVDISHESFEDHIESVNQ-ILQEIDAH-----RKPAIM 315 Query: 277 GLSQIDTV-----DSDTL--ARKKN-------ELATQCGQVPFEF-SSITGHGIPQILEC 321 ++ID D D L A KKN + + P F S++T P++ + Sbjct: 316 IFNKIDDFSYEKKDEDDLTPATKKNISLDEWRKTWMAKSKFPTVFISALTKENFPEMKKL 375 Query: 322 LHDKIFSI 329 ++D++ I Sbjct: 376 IYDEVHRI 383 >gi|301617385|ref|XP_002938122.1| PREDICTED: GTP-binding protein era homolog [Xenopus (Silurana) tropicalis] Length = 445 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I I IIG PNAGKST + R ++ TT G++ EG + +L D PG++ Sbjct: 97 ILRIAIIGSPNAGKSTLSNQLLGRKVFPVSKKVHTTRCQAQGVITEGETQLVLLDTPGMV 156 Query: 218 KNA 220 + Sbjct: 157 TTS 159 >gi|126641527|ref|YP_001084511.1| putative GTP-binding protein [Acinetobacter baumannii ATCC 17978] Length = 296 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 12/81 (14%) Query: 207 EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCI--LDELS 263 EF+ DI G++ A +G G+G++FL + T + H+V E ENV I LD+++ Sbjct: 2 EFV--DIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKIDPLDDIA 59 Query: 264 AYNSELRKKIEIVGLSQIDTV 284 N+EL L+ ++TV Sbjct: 60 TINTEL-------ALADLETV 73 >gi|158521130|ref|YP_001529000.1| GTP-binding protein Era [Desulfococcus oleovorans Hxd3] gi|158509956|gb|ABW66923.1| GTP-binding protein Era [Desulfococcus oleovorans Hxd3] Length = 303 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I I G PNAGKST L + K I +D P TT LG+V + + D PGI + Sbjct: 16 IAICGPPNAGKSTLLNLLAGEKISITSDKPQTTRNRILGVVNRKNAQVVFVDTPGIFR 73 >gi|84496849|ref|ZP_00995703.1| GTP-binding protein Era [Janibacter sp. HTCC2649] gi|84383617|gb|EAP99498.1| GTP-binding protein Era [Janibacter sp. HTCC2649] Length = 317 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 14/134 (10%) Query: 164 IIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 +IG PNAGKST ++ K I + P TT + GIV + +L D PG+ K Sbjct: 24 LIGRPNAGKSTLTNALVGEKVAITSSKPQTTRHTIRGIVTSPMSQIVLVDTPGLHKPR-- 81 Query: 223 GAGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELR--KKIEIVG 277 +G+R T + + +V ++ + Q I EL +ELR K+ I+ Sbjct: 82 -TLLGERLNDLVRETLLNVDVVGFCLPADQRIGPGDQWIAREL----AELRQAKRTPIIA 136 Query: 278 L-SQIDTVDSDTLA 290 L ++ D VD LA Sbjct: 137 LATKSDKVDRQRLA 150 >gi|325571570|ref|ZP_08147070.1| GTP-binding protein HflX [Enterococcus casseliflavus ATCC 12755] gi|325156046|gb|EGC68242.1| GTP-binding protein HflX [Enterococcus casseliflavus ATCC 12755] Length = 420 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 11/110 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP--NLGIVKEGYKEFILADIPGIIKN 219 +G+IG NAGKST L +T A D F TL P + EG+ E + D G I+ Sbjct: 203 MGLIGYTNAGKSTILNILTSADTYEQDQLFATLDPLTKRWRMPEGF-EVTITDTVGFIQE 261 Query: 220 AHQGAGIGDRF---LKHTERTHVLLHIVSA-LEENVQAAYQC--ILDELS 263 + D F L+ ++ LLH+V A EE VQ +++ELS Sbjct: 262 L--PTQLIDAFHSTLEESQNMDFLLHVVDASSEERVQQEETVLKLMEELS 309 >gi|300858946|ref|YP_003783929.1| putative GTP-binding protein [Corynebacterium pseudotuberculosis FRC41] gi|300686400|gb|ADK29322.1| putative GTP-binding protein [Corynebacterium pseudotuberculosis FRC41] gi|302206647|gb|ADL10989.1| GTP-binding protein era-like protein [Corynebacterium pseudotuberculosis C231] gi|302331196|gb|ADL21390.1| GTP-binding protein era-like protein [Corynebacterium pseudotuberculosis 1002] gi|308276890|gb|ADO26789.1| GTP-binding protein era-like protein [Corynebacterium pseudotuberculosis I19] Length = 305 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 6/131 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I +G PN GKST ++ K I A+ P TT +P GIV + I+ D PG+ + Sbjct: 15 ISFVGRPNTGKSTLTNALVGEKIAITANQPETTRHPIRGIVHRPDAQIIVVDTPGLHRPR 74 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL-S 279 + +K T L+ + +E + + ILD + ++ K I+G+ + Sbjct: 75 TLLGERLNEVVKDTYADMDLIGLTIPADEKIGPGDRWILDAV----KKVAPKTPILGIVT 130 Query: 280 QIDTVDSDTLA 290 + D V D +A Sbjct: 131 KADKVSRDQVA 141 >gi|260590124|ref|ZP_05856037.1| GTP-binding protein HflX [Blautia hansenii DSM 20583] gi|331084381|ref|ZP_08333485.1| GTP-binding protein HflX [Lachnospiraceae bacterium 6_1_63FAA] gi|260539636|gb|EEX20205.1| GTP-binding protein HflX [Blautia hansenii DSM 20583] gi|330401645|gb|EGG81226.1| GTP-binding protein HflX [Lachnospiraceae bacterium 6_1_63FAA] Length = 416 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I+G NAGKST L ++T AK D F TL P I++ G ++ L D G I Sbjct: 200 IMTAAIVGYTNAGKSTLLNTLTDAKVLEEDKLFATLDPTTRILELPGKQKLYLTDTVGFI 259 Query: 218 KN 219 + Sbjct: 260 RK 261 >gi|145344056|ref|XP_001416555.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144576781|gb|ABO94848.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 597 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 22/128 (17%) Query: 120 GGNGGFG--NAHFKSSTNQAPYYANPGILGQEKIIWL--------KLKLIADIGIIGLPN 169 GG+G G NA+FKSS N LG E ++ + +K +GI+G PN Sbjct: 231 GGSGKLGARNANFKSSGNA---LGGADSLGAESVLEMLKNYARNKNIKTAITVGIVGFPN 287 Query: 170 AGKSTFLASVTRAKPKIA--DYPFTTLYPNLGIVKEGY--KEFILADIPGIIKNAHQGAG 225 GKS+ + S+ R++ A + P T ++KE K L D PG++ + G Sbjct: 288 VGKSSLINSLKRSRTAAAVGNTPGMT-----KVLKEIKLDKHVKLIDSPGVVFASALGES 342 Query: 226 IGDRFLKH 233 G L++ Sbjct: 343 AGAAALRN 350 >gi|119897618|ref|YP_932831.1| GTP-binding protein HflX [Azoarcus sp. BH72] gi|119670031|emb|CAL93944.1| probable GTP-binding protein HflX [Azoarcus sp. BH72] Length = 464 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 2/90 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 +A++ ++G NAGKST + ++T ++ +A+ F TL + + E +++D G I Sbjct: 237 LANVALVGYTNAGKSTLMRALTGSEVLVANKLFATLDTTVRTLYPESVPRVLVSDTVGFI 296 Query: 218 KNAHQG-AGIGDRFLKHTERTHVLLHIVSA 246 KN G L +LLH++ A Sbjct: 297 KNLPHGLVASFKSTLDEALDAALLLHVIDA 326 >gi|83644633|ref|YP_433068.1| GTP-binding protein Era [Hahella chejuensis KCTC 2396] gi|83632676|gb|ABC28643.1| GTP-binding protein Era [Hahella chejuensis KCTC 2396] Length = 304 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I + P TT + LGI EG + I D PG+ Sbjct: 16 VAIVGRPNVGKSTLLNHILGQKISITSKKPQTTRHQILGIKTEGDYQAIYVDTPGL 71 >gi|20808269|ref|NP_623440.1| ferrous ion uptake system protein FeoB ( GTPase) [Thermoanaerobacter tengcongensis MB4] gi|20516869|gb|AAM25044.1| Ferrous ion uptake system protein FeoB (predicted GTPase) [Thermoanaerobacter tengcongensis MB4] Length = 626 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 13/145 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAH 221 ++G PN GKS FL ++T AK +++YP TT+ G K G + + D PGI + + Sbjct: 5 LVGQPNVGKSLFLNTLTGAKVIVSNYPGTTVDVTEGRTKVGDESWEFVDTPGIYSLTPSS 64 Query: 222 QGAGIGDRFLKHTERTHVLLHIVS--ALEENVQAAYQC------ILDELSAYNSELRK-- 271 + + R + V +HI+ ALE N+ + Q + ++ Y L+K Sbjct: 65 EEEKVTYRIVLEGNYDFV-IHILDALALERNLIISLQLAELGVPFMIAVNFYEEALKKGM 123 Query: 272 KIEIVGLSQIDTVDSDTLARKKNEL 296 KI++ L ++ V + K E+ Sbjct: 124 KIDLRALEELLGVPVVVINPFKKEI 148 >gi|315654892|ref|ZP_07907797.1| GTP-binding protein Era [Mobiluncus curtisii ATCC 51333] gi|315490853|gb|EFU80473.1| GTP-binding protein Era [Mobiluncus curtisii ATCC 51333] Length = 350 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 58/145 (40%), Gaps = 29/145 (20%) Query: 163 GIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK--- 218 +IG PN GKST + A V R +D P TT GIV + IL D PGI + Sbjct: 60 AVIGRPNVGKSTLINAMVGRKIAITSDRPETTRRVARGIVHRPDFQLILVDTPGIHRPRT 119 Query: 219 ------------------------NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A Q G GDR + T+ ++ + + A+ Sbjct: 120 LLGQRLNDMVDDAFSEVDVAVFCVPADQPIGPGDRRIVETQLKTAHFPAIAVVTKTDAAS 179 Query: 255 YQCILDELSAYNSELRKKIEIVGLS 279 + I ++L A S+L EIV +S Sbjct: 180 REQIAEQLLAV-SQLHDFAEIVPIS 203 >gi|309800252|ref|ZP_07694428.1| GTP-binding protein Era [Streptococcus infantis SK1302] gi|308116105|gb|EFO53605.1| GTP-binding protein Era [Streptococcus infantis SK1302] Length = 299 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T ++ +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVIFMVPA-DEARGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLAQIDDFRNQMDFKEIVP--ISALQGNNVSRLIDILSENL 169 >gi|315586802|gb|ADU41183.1| GTP-binding protein Era [Helicobacter pylori 35A] Length = 301 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 25/173 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYK-EFILADIPG 215 + +IG PNAGKST L ++ A + + + + KEGY+ + I D PG Sbjct: 8 VALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPG 67 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS--ELRKKI 273 + HQ + L L + E V A + D+L Y L +K Sbjct: 68 L---HHQEKLLNQCMLSQA------LKAMGDAELCVFLA--SVHDDLKGYEEFLSLCQKP 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECL 322 I+ LS+IDT + +K E Q VP S+ + +LEC+ Sbjct: 117 HILALSKIDTATHKQVLQKLQEYQQYASQFVDLVP--LSAKKSQNLNTLLECI 167 >gi|291279972|ref|YP_003496807.1| small GTP-binding protein [Deferribacter desulfuricans SSM1] gi|290754674|dbj|BAI81051.1| small GTP-binding protein [Deferribacter desulfuricans SSM1] Length = 576 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 14/144 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + I+G NAGK+T + S+T + + F TL + ++ KE I+ D G I Sbjct: 404 IPTVSIVGYTNAGKTTLINSLTNSSIYADNLMFATLDTSSKRLRFPEEKEIIITDTVGFI 463 Query: 218 KNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNSELRK 271 ++ + + D F L + LH+V + + IL+EL+ + E Sbjct: 464 RDLPE--DLKDAFKSTLDELYDADLFLHVVDISNPEFRKQIESVNKILEELNLIDVE--- 518 Query: 272 KIEIVGLSQIDTVDSDTLARKKNE 295 +I+ ++ID +D ++L KNE Sbjct: 519 --QILVFNKIDLLDEESLKELKNE 540 >gi|298346303|ref|YP_003718990.1| GTP-binding protein Era family protein [Mobiluncus curtisii ATCC 43063] gi|298236364|gb|ADI67496.1| GTP-binding protein Era family protein [Mobiluncus curtisii ATCC 43063] Length = 350 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 58/145 (40%), Gaps = 29/145 (20%) Query: 163 GIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK--- 218 +IG PN GKST + A V R +D P TT GIV + IL D PGI + Sbjct: 60 AVIGRPNVGKSTLINAMVGRKIAITSDRPETTRRVARGIVHRPDFQLILVDTPGIHRPRT 119 Query: 219 ------------------------NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA 254 A Q G GDR + T+ ++ + + A+ Sbjct: 120 LLGQRLNDMVDDAFSEVDVAVFCVPADQPIGPGDRRIVETQLKTAHFPAIAVVTKTDAAS 179 Query: 255 YQCILDELSAYNSELRKKIEIVGLS 279 + I ++L A S+L EIV +S Sbjct: 180 REQIAEQLLAV-SQLHDFAEIVPIS 203 >gi|315230080|ref|YP_004070516.1| ferrous iron transport protein B [Thermococcus barophilus MP] gi|315183108|gb|ADT83293.1| ferrous iron transport protein B [Thermococcus barophilus MP] Length = 665 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 32/54 (59%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 I + G PN GK+T ++T + + ++P T+ GI+K +EF++ D+PG Sbjct: 5 IALAGNPNVGKTTLFNALTGLRQHVGNWPGVTVEKKEGIMKYKGREFLVVDLPG 58 >gi|13470637|ref|NP_102206.1| GTP binding protein-like [Mesorhizobium loti MAFF303099] gi|14021379|dbj|BAB47992.1| GTP binding protein-like [Mesorhizobium loti MAFF303099] Length = 431 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 7/159 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + I+G NAGKST +T A D F TL P L V+ + IL+D G I + Sbjct: 201 VAIVGYTNAGKSTLFNRLTGADVLAQDMLFATLDPTLRRVRLPHGTPIILSDTVGFISDL 260 Query: 220 -AHQGAGIGDRFLKHTERTHVL-LHIVSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 H A + E V+ L +S + QA + IL +L + ++ IE+ Sbjct: 261 PTHLIAAFRATLEEVVEADLVIHLRDISDPDTAAQAEDVERILADLGVDAGDTKRVIEV- 319 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 +++D +D +R + P S++TG GI Sbjct: 320 -WNKVDLLDEGNRSRLLADAVDGSKGPPIAISAVTGEGI 357 >gi|71898898|ref|ZP_00681065.1| Ferrous iron transport protein B:Small GTP-binding protein domain [Xylella fastidiosa Ann-1] gi|71731310|gb|EAO33374.1| Ferrous iron transport protein B:Small GTP-binding protein domain [Xylella fastidiosa Ann-1] Length = 617 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 29/187 (15%) Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY------KEFIL 210 K + + ++G PN+GK+ +T ++ K+A+YP T+ KEGY +EF++ Sbjct: 3 KHVLRLALVGNPNSGKTALFNRLTGSRQKVANYPGVTVER-----KEGYFRASSGREFVI 57 Query: 211 ADIPGIIKNAHQGAGIGDRFLKHTER--------THVLLHIVSALEENVQAAYQCILDEL 262 D+PG + Q A + + + R VL+ +V A N++ + +L+ L Sbjct: 58 LDLPG--AYSFQPASLDEAITRDFCRGFYPGEAPPDVLVCVVDA--TNLRLHLRFVLELL 113 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 EL + + +V L+ +D + + L G E ++ HG +LE L Sbjct: 114 -----ELGRPV-VVALNMVDAAQQRGIRIDRVILEQLLGVPVVETVAVRRHGARALLEQL 167 Query: 323 HDKIFSI 329 + + Sbjct: 168 DTGVIPL 174 >gi|310764814|gb|ADP09764.1| GTP-binding protein Era [Erwinia sp. Ejp617] Length = 301 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 IAIVGRPNVGKSTLLNQLLGQKVSITSRKPQTTRHRIMGIHTEGQYQAIYVDTPGL 66 >gi|302385226|ref|YP_003821048.1| ferrous iron transport protein B [Clostridium saccharolyticum WM1] gi|302195854|gb|ADL03425.1| ferrous iron transport protein B [Clostridium saccharolyticum WM1] Length = 665 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 13/146 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 +G +G PN GK+T + T AK K+A++P T+ G + + D PGI Sbjct: 10 VGFVGNPNCGKTTLFNAFTGAKLKVANWPGVTVERVEGETSYKGRPIRVVDTPGIYSLTC 69 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + I R + V++++V S+LE N+ Q KK I+ L Sbjct: 70 YTLEEIVTRKCLENDEVDVIINVVDASSLERNLYLTLQ----------LLELKKPVILAL 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVP 304 + +D V+ + + L G +P Sbjct: 120 NMMDIVEDRGMEIDLHRLPEMLGSIP 145 >gi|260591203|ref|ZP_05856661.1| GTP-binding protein Era [Prevotella veroralis F0319] gi|260537068|gb|EEX19685.1| GTP-binding protein Era [Prevotella veroralis F0319] Length = 293 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 8/92 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + + K IA + TT + +GIV + + +D PG++K Sbjct: 7 VNIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTDDSQIVFSDTPGVLKPN 66 Query: 221 HQGAGIGDRFLKHTER----THVLLHIVSALE 248 ++ + + L+ +E +LL++ +E Sbjct: 67 YK---MQEMMLQFSESALADADILLYVTDVVE 95 >gi|254453314|ref|ZP_05066751.1| GTP-binding protein Era [Octadecabacter antarcticus 238] gi|198267720|gb|EDY91990.1| GTP-binding protein Era [Octadecabacter antarcticus 238] Length = 317 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 + +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 23 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAIEGDSQIVFVDTPGLFQ 80 >gi|254440407|ref|ZP_05053901.1| GTP-binding protein Era [Octadecabacter antarcticus 307] gi|198255853|gb|EDY80167.1| GTP-binding protein Era [Octadecabacter antarcticus 307] Length = 313 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 + +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 19 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAIEGDSQIVFVDTPGLFQ 76 >gi|192361241|ref|YP_001983532.1| hypothetical protein CJA_3078 [Cellvibrio japonicus Ueda107] gi|190687406|gb|ACE85084.1| hypothetical protein CJA_3078 [Cellvibrio japonicus Ueda107] Length = 445 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 10/138 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST +T A+ + F TL P + ++ +LAD G I Sbjct: 198 IPTVSLVGYTNAGKSTLFNLITGAEVYAENQLFATLDPTMRRIELADIGAVVLADTVGFI 257 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIV-SALEENVQAAYQC--ILDELSAYN-SELR-- 270 + H+ L+ + +LLH++ SA EE ++ Q +L+E+ A + +LR Sbjct: 258 SHLPHRLVEAFRATLEEASNSSLLLHVIDSAAEERLRNIEQVDLVLEEIGAADLPQLRVY 317 Query: 271 KKIEIV--GLSQIDTVDS 286 K++++ QID DS Sbjct: 318 NKLDLLEGASPQIDRDDS 335 >gi|185179024|ref|ZP_02964773.1| GTP-binding protein Era [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024049|ref|ZP_02996802.1| GTP-binding protein Era [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518321|ref|ZP_03003835.1| GTP-binding protein Era [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524324|ref|ZP_03004361.1| GTP-binding protein Era [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867961|ref|ZP_03079958.1| GTP-binding protein Era [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273309|ref|ZP_03205845.1| GTP-binding protein Era [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554232|ref|YP_002284938.1| GTP-binding protein Era [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550907|ref|ZP_03771856.1| GTP-binding protein [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551511|ref|ZP_03772457.1| GTP-binding protein [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|226741403|sp|B5ZBZ8|ERA_UREU1 RecName: Full=GTPase Era gi|184209115|gb|EDU06158.1| GTP-binding protein Era [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188019082|gb|EDU57122.1| GTP-binding protein Era [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998143|gb|EDU67240.1| GTP-binding protein Era [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195659806|gb|EDX53186.1| GTP-binding protein Era [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660357|gb|EDX53617.1| GTP-binding protein Era [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249829|gb|EDY74609.1| GTP-binding protein Era [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541733|gb|ACI59962.1| GTP-binding protein Era [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379326|gb|EEH01691.1| GTP-binding protein [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225380061|gb|EEH02423.1| GTP-binding protein [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 300 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + ++ R K I++ P TT I ++ I D PG Sbjct: 8 VAIVGKPNVGKSTLINAIMRKKVSIISNKPQTTRNAIKEIYEDDDSAIIFTDTPGF---- 63 Query: 221 HQGAGIGDRFLKH 233 H+ + D FL H Sbjct: 64 HEPSNKLDLFLNH 76 >gi|225018650|ref|ZP_03707842.1| hypothetical protein CLOSTMETH_02600 [Clostridium methylpentosum DSM 5476] gi|224948558|gb|EEG29767.1| hypothetical protein CLOSTMETH_02600 [Clostridium methylpentosum DSM 5476] Length = 310 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 4/74 (5%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 A I I+G PN GKS+ L ++T K I + P TT G++ + +++ D PG++K Sbjct: 23 AFIAIVGKPNVGKSSLLNALTGHKIAIVTNRPQTTRTRITGVLTQEETQYVFIDTPGLLK 82 Query: 219 NAHQGAGIGDRFLK 232 ++ +G++ +K Sbjct: 83 ARNK---LGEKMVK 93 >gi|193212091|ref|YP_001998044.1| GTP-binding protein EngA [Chlorobaculum parvum NCIB 8327] gi|238692612|sp|B3QLF4|DER_CHLP8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|193085568|gb|ACF10844.1| small GTP-binding protein [Chlorobaculum parvum NCIB 8327] Length = 438 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 22/161 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKS+ + ++ +I +D P TT ++K KE+IL D G+ K Sbjct: 181 LAVLGRPNVGKSSLVNALLGTDRQIVSDVPGTTRDAIDSVLKRNGKEYILIDTAGLRKRT 240 Query: 221 HQGAGI----GDRFLKHTERTHVLLHIVSA---LEENVQAAYQCILDELSAYNSELRKKI 273 GI R + ER V L ++ A LE ++ RKK Sbjct: 241 KIDPGIEYYSSLRTERAIERCQVALVLLDAQLGLESQDMKIIHMAIE---------RKKG 291 Query: 274 EIVGLSQIDTVDSDTLARKK--NELATQCGQ---VPFEFSS 309 ++ +++ D V+ D+ KK + L Q G +P F+S Sbjct: 292 VLILVNKWDLVEKDSKTSKKFTDNLMMQLGNIGYIPIIFTS 332 >gi|88855440|ref|ZP_01130104.1| GTP-binding protein [marine actinobacterium PHSC20C1] gi|88815347|gb|EAR25205.1| GTP-binding protein [marine actinobacterium PHSC20C1] Length = 516 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 4/131 (3%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I G NAGKS+ L +TRA + + F TL + + + F L+D G + Sbjct: 294 VPSVAIAGYTNAGKSSLLNRLTRAGVLVENALFATLDATVRRSETADGRLFTLSDTVGFV 353 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +N HQ L+ + V++H+V A + A + D + + R EIV Sbjct: 354 RNLPHQLVEAFRSTLEEIGQADVIVHVVDASHPDPGAQLSTVRDVIGELGA--RDIPEIV 411 Query: 277 GLSQIDTVDSD 287 ++ D D D Sbjct: 412 VFNKSDLADDD 422 >gi|332305588|ref|YP_004433439.1| ribosome-associated GTPase EngA [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172917|gb|AEE22171.1| ribosome-associated GTPase EngA [Glaciecola agarilytica 4H-3-7+YE-5] Length = 482 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 13/161 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYEGLQFIVVDTGG-ISGD 63 Query: 221 HQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 QG + ++ L + V+L +V A + A Q I + L N K + +V Sbjct: 64 EQGIDMAMANQSLMAIDEADVVLFLVDA-RVGLTGADQGIAEHLRKQN----KSVYVVA- 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 +++D +D D+ + A G V + ++ G G+ Q+L Sbjct: 118 NKVDGIDGDS--ESADFFALGLGDVN-QIAAAHGRGVTQLL 155 >gi|325268711|ref|ZP_08135340.1| GTP-binding protein Era [Prevotella multiformis DSM 16608] gi|324988955|gb|EGC20909.1| GTP-binding protein Era [Prevotella multiformis DSM 16608] Length = 293 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 8/92 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + + K IA + TT + +GIV + + +D PG++K Sbjct: 7 VNIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTEDAQIVFSDTPGVLKPN 66 Query: 221 HQGAGIGDRFLKHTER----THVLLHIVSALE 248 ++ + + L+ +E VLL++ +E Sbjct: 67 YK---MQEMMLQFSESALADADVLLYVTDVIE 95 >gi|294678826|ref|YP_003579441.1| GTP-binding protein Era [Rhodobacter capsulatus SB 1003] gi|294477646|gb|ADE87034.1| GTP-binding protein Era [Rhodobacter capsulatus SB 1003] Length = 303 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 + +IG PNAGKST L + AK I + T + G+ G + + D PGI + Sbjct: 10 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVCMAGTAQLVFVDTPGIFR 67 >gi|304310580|ref|YP_003810178.1| Small GTP-binding protein Era [gamma proteobacterium HdN1] gi|301796313|emb|CBL44521.1| Small GTP-binding protein Era [gamma proteobacterium HdN1] Length = 305 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I+G PN GKST L + K I P TT + LGI +G + I D PGI + Sbjct: 17 IAIVGRPNVGKSTLLNHILGQKISITSRKPQTTRHRILGIKTDGPVQAIYVDTPGIHRGG 76 Query: 221 HQGAGIGDRFLKHT 234 + +RF+ + Sbjct: 77 EKAL---NRFMNRS 87 >gi|269962406|ref|ZP_06176756.1| GTP-binding protein [Vibrio harveyi 1DA3] gi|269832902|gb|EEZ87011.1| GTP-binding protein [Vibrio harveyi 1DA3] Length = 498 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 212 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRG 271 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK E +V+L ++ A E + L+A S ++ Sbjct: 272 RINETVEKFSVVKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRS------IVL 325 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D+D K EL + G V F S++ G G+ + E + + Sbjct: 326 AVNKWDGLDNDVKENVKKELDRRLGFVDFARIHFISALHGTGVGHLFESIQE 377 Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 14/167 (8%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYK-EFILADIPG 215 ++ + ++G PN GKST +TR + +AD+P T G + G + EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60 Query: 216 IIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 I +G + + L + V+L +V +A + ++A+ ++ K Sbjct: 61 -IDGTEEGVETKMAQQSLAAIDEADVVLFLVDG-----RAGLTPSDEAIAAHLRKIEKPA 114 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 +V +++ID +D+D +L ++ ++ G G+ +LE Sbjct: 115 MLV-VNKIDGIDADAACADFWQLGVDDM---YQIAAAHGRGVTALLE 157 >gi|156843181|ref|XP_001644659.1| hypothetical protein Kpol_1056p1 [Vanderwaltozyma polyspora DSM 70294] gi|156115307|gb|EDO16801.1| hypothetical protein Kpol_1056p1 [Vanderwaltozyma polyspora DSM 70294] Length = 505 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 12/180 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN 219 + +IG+PN GKS+ + +T + I +D P TT I+ GYK I++D GI K+ Sbjct: 256 MTLIGVPNTGKSSLINKITSDEISIVSDIPGTTRDSIDAIININGYK-VIISDTAGIRKD 314 Query: 220 AHQGAGIG--DRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 ++ + +R K R+ + L ++ N I+D L A E+++K + Sbjct: 315 TNEKIEVLGIERSKKMASRSDICLVLIDP--NNKPLLSNEIIDLLQA--PEIKRKHLRII 370 Query: 278 LSQIDTV-DSDTLARKKNELATQCG-QVPFEF-SSITGHGIPQILECLHDKIFSIRGENE 334 +++ D + + + L + E+ T+ ++P F S T GI +++ L D + ++E Sbjct: 371 VNKTDLIKNENILENLQEEIVTKYNLKIPINFISCATESGIEKLIYELTDTFDDLSNKSE 430 >gi|73668974|ref|YP_304989.1| ferrous iron transport protein B [Methanosarcina barkeri str. Fusaro] gi|72396136|gb|AAZ70409.1| ferrous iron transport protein B [Methanosarcina barkeri str. Fusaro] Length = 665 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 3/100 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 + + G PN GK+T ++T A+ K+ ++P T+ +GI + G + D+PG A Sbjct: 8 VALTGNPNVGKTTVFNAITGARQKVGNWPGVTVEKKIGIKEYGDCVLEIVDLPGTYSLTA 67 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCI 258 + + R E+ +++ I+ + LE N+ + Q + Sbjct: 68 YSADEVVARNYILEEKPDIVVQILDSTNLERNLYLSTQLL 107 >gi|307292854|ref|ZP_07572700.1| GTP-binding protein Era [Sphingobium chlorophenolicum L-1] gi|306880920|gb|EFN12136.1| GTP-binding protein Era [Sphingobium chlorophenolicum L-1] Length = 302 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PNAGKST + ++ K I TT +G+ EG + +L D PGI Sbjct: 13 IAIVGAPNAGKSTLVNALVGQKVAITSPKAQTTRTRVMGVAIEGDAQMVLVDTPGI 68 >gi|302348091|ref|YP_003815729.1| Putative GTP-binding protein HflX [Acidilobus saccharovorans 345-15] gi|302328503|gb|ADL18698.1| Putative GTP-binding protein HflX [Acidilobus saccharovorans 345-15] Length = 373 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 24/177 (13%) Query: 163 GIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I+G +AGK++ ++T +P +Y FTTL+ +V + +L D G +++ Sbjct: 179 SIVGYASAGKTSIFNAITGERQPTGPEY-FTTLFAKHKMVNFNNTKIMLIDTVGFVRDV- 236 Query: 222 QGAGIGDRF---LKHTERTHVLLHI------VSALEENVQAAYQCILDELSAYNSELRKK 272 A I + F L+ VL+ + VSA+ E V AA +L +L+A N + Sbjct: 237 -PAEIIESFYSTLQEASLADVLIFVVDSSEDVSAIREKV-AAGVSLLSKLNAINKPI--- 291 Query: 273 IEIVGLSQIDTVDSDTLARKKN---ELATQCGQVP--FEFSSITGHGIPQILECLHD 324 I+ +++ID V D L +K++ EL + G E S++ + +LE + + Sbjct: 292 --ILAMNKIDLVARDDLNKKESLVRELLSHMGIKADLVEVSAVKKLNLEALLEKVSE 346 >gi|291286359|ref|YP_003503175.1| GTP-binding proten HflX [Denitrovibrio acetiphilus DSM 12809] gi|290883519|gb|ADD67219.1| GTP-binding proten HflX [Denitrovibrio acetiphilus DSM 12809] Length = 597 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 10/126 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + IIG NAGKST L S+T++ D F TL + ++ ++ I+ D G I++ Sbjct: 390 VSIIGYTNAGKSTLLNSLTQSGVYADDLMFATLDTSSKRIRFPQERDVIITDTVGFIRDL 449 Query: 221 HQG-AGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKIEIV 276 + G L+ + VLLH+V + + + + IL EL EL K I+ Sbjct: 450 PENLKGAFKSTLEELQDADVLLHVVDISSDGFDSHVHSVETILQEL-----ELTDKESIL 504 Query: 277 GLSQID 282 L++ D Sbjct: 505 VLNKTD 510 >gi|104780244|ref|YP_606742.1| GTP-binding protein EngA [Pseudomonas entomophila L48] gi|166225841|sp|Q1IEH7|DER_PSEE4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|95109231|emb|CAK13928.1| GTP-binding protein EngA [Pseudomonas entomophila L48] Length = 488 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 11/167 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +T+ + I D T G + +IL D GI Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSYILIDTGGI 60 Query: 217 I-KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + ++ L E +L +V A + AA Q I + L N E I Sbjct: 61 TGDEVGMDEKMAEQSLMAIEEADYVLFLVDA-RAGMTAADQMIAEHLRKRNKE-----AI 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + ++ID +D+D +AR + +P S G GI ++E + Sbjct: 115 LVANKIDNIDAD-VARAEFSPLGMGNAIPVAGSQ--GRGINALMEAV 158 >gi|227112682|ref|ZP_03826338.1| GTP-binding protein EngA [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 495 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 17/170 (10%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D GI Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIVDTGGI 60 Query: 217 IKNAHQGAGIGDRF----LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G+ R L E ++L +V A + A DE A + R+K Sbjct: 61 DGTED---GVETRMAGQSLVAIEEADIVLFMVDARAGLMPA------DEGIAKHLRSREK 111 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 ++ ++ D +D D + L G+V + ++ G G+ +LE + Sbjct: 112 TTVLVANKTDGLDPDMVTADFYSLG--MGEV-YAIAASHGRGVTSLLETV 158 >gi|222616255|gb|EEE52387.1| hypothetical protein OsJ_34479 [Oryza sativa Japonica Group] Length = 568 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 21/176 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I + ++G NAGKST L +T A D F TL P ++ + EF+L D G I Sbjct: 343 IPVVSLVGYTNAGKSTLLNRLTGADVLAEDKLFATLDPTTRRVLMKNGTEFLLTDTVGFI 402 Query: 218 KNAHQGAGIGDR-FLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKI 273 + R L+ + V++H+V L + A +L EL ++ Sbjct: 403 QKLPTMLVAAFRATLEEISESSVIVHLVDISHPLAQQQIDAVDKVLKEL-----DIESIP 457 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQ---CGQVPFEFSSITGHGIPQILECLHDKI 326 ++V ++ID D DTL R K E Q C S+I G G+ + + K+ Sbjct: 458 KLVVWNKIDNTD-DTL-RVKEEAEKQGIIC------ISAINGDGLEEFCNAIQAKL 505 >gi|159904651|ref|YP_001548313.1| ferrous iron transport protein B [Methanococcus maripaludis C6] gi|159886144|gb|ABX01081.1| ferrous iron transport protein B [Methanococcus maripaludis C6] Length = 647 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 32/55 (58%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + ++G PN GK+T +T K +I ++P T+ G K+ + +++ D+PGI Sbjct: 7 VALLGQPNVGKTTLFNHLTGMKQRIGNWPGVTVEKKEGFFKKNNESYVVVDLPGI 61 >gi|15598994|ref|NP_252488.1| GTP-binding protein EngA [Pseudomonas aeruginosa PAO1] gi|107103319|ref|ZP_01367237.1| hypothetical protein PaerPA_01004388 [Pseudomonas aeruginosa PACS2] gi|152985588|ref|YP_001346699.1| GTP-binding protein EngA [Pseudomonas aeruginosa PA7] gi|254236703|ref|ZP_04930026.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|254242490|ref|ZP_04935812.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|313109217|ref|ZP_07795185.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa 39016] gi|26006739|sp|Q9HXJ8|DER_PSEAE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166225840|sp|A6V0W4|DER_PSEA7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|9949972|gb|AAG07186.1|AE004798_9 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|126168634|gb|EAZ54145.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126195868|gb|EAZ59931.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|150960746|gb|ABR82771.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] gi|310881687|gb|EFQ40281.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa 39016] Length = 493 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 9/136 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +T+++ I A+Y T G + + +I+ D GI Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEARWQGRTYIVIDTGGI 60 Query: 217 IKNAHQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + A + ++ L+ E +L +V + + AA Q I + L R K Sbjct: 61 SGDEEGIDAKMAEQSLQAIEEADAVLFLVDS-RAGMTAADQMIAEHLRK-----RNKRSF 114 Query: 276 VGLSQIDTVDSDTLAR 291 + +++DT+D D LAR Sbjct: 115 LIANKVDTIDPD-LAR 129 >gi|254448866|ref|ZP_05062322.1| GTP-binding protein Era [gamma proteobacterium HTCC5015] gi|198261556|gb|EDY85845.1| GTP-binding protein Era [gamma proteobacterium HTCC5015] Length = 292 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPG 215 ++G PN GKST + + + IA + P TT + LG+V + + + D PG Sbjct: 1 MVGRPNVGKSTLMNRLIGVRLSIATHKPQTTRHQVLGVVTRDHTQMVFVDTPG 53 >gi|41408937|ref|NP_961773.1| hypothetical protein MAP2839c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397296|gb|AAS05156.1| HflX [Mycobacterium avium subsp. paratuberculosis K-10] Length = 482 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 17/165 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + I I+G NAGKS+ L ++T A + D F TL P + + + F+L D G + Sbjct: 258 VPSIAIVGYTNAGKSSLLNALTGAGVLVQDALFATLEPTTRRAEWDDGRAFVLTDTVGFV 317 Query: 218 KNAHQGAGIGDRF---LKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAYNSELR 270 + H + + F L+ +L+H+V + N + A +Q I + ++ ++ + Sbjct: 318 R--HLPTQLVEAFRSTLEEVVDADLLVHVVDGSDVNPLAQIDAVHQVISEVIADHHGD-- 373 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 E++ +++ D LA+ ++ L G V F S+ TG GI Sbjct: 374 PPPELLAVNKTDAAGDVALAKLRHALP---GAV-F-VSAATGDGI 413 >gi|114330965|ref|YP_747187.1| small GTP-binding protein [Nitrosomonas eutropha C91] gi|114307979|gb|ABI59222.1| GTP-binding protein HflX [Nitrosomonas eutropha C91] Length = 377 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 28/177 (15%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL--------YPNLGIVKEGYKEFIL 210 I + I+G NAGKST + R+ AD F TL P G++ ++ Sbjct: 198 IMSVSIVGYTNAGKSTLFNRLVRSDAYAADKLFATLDTTTRRLFLPERGLI-------VI 250 Query: 211 ADIPGIIKN-AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQ-AAYQCILDELSAYN 266 +D G I++ H L+ T + +LLH+ VS+ +VQ + +L E+ A Sbjct: 251 SDTVGFIRDLPHTLVAAFRATLEETIQADLLLHVVDVSSSNRDVQISEVNKLLQEIGADT 310 Query: 267 SELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECL 322 +I+ L++ID ++ + +N + + G++ S+ TG G + E L Sbjct: 311 IP-----QILILNKIDLIEQGS---SENYMRDEYGRIARIHLSARTGAGFGYLYEAL 359 >gi|103486700|ref|YP_616261.1| GTP-binding protein Era [Sphingopyxis alaskensis RB2256] gi|98976777|gb|ABF52928.1| GTP-binding protein Era [Sphingopyxis alaskensis RB2256] Length = 297 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + ++G PNAGKST + ++ K I T L G+ EG + +L D PGI A Sbjct: 8 VAVVGAPNAGKSTLVNALVGQKVAIVSPKAQTTRTRLMGVAMEGETQIVLIDTPGIFAPA 67 Query: 221 HQ 222 + Sbjct: 68 RR 69 >gi|315634680|ref|ZP_07889964.1| ribosome-associated GTPase EngA [Aggregatibacter segnis ATCC 33393] gi|315476628|gb|EFU67376.1| ribosome-associated GTPase EngA [Aggregatibacter segnis ATCC 33393] Length = 512 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAHLAGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E ++L +V A +A ++ Y + + K +V Sbjct: 65 EEGVEEKMAEQSLLAIEEADIVLFLVDA-----RAGLTSADIGIANYLRQRQNKTTVVVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 +++D +D+D+ + +L G++ + ++ G GI ++E Sbjct: 120 NKVDGIDADSHCAEFYQLG--LGEIA-QIAASQGRGIASLME 158 >gi|307729255|ref|YP_003906479.1| GTP-binding proten HflX [Burkholderia sp. CCGE1003] gi|307583790|gb|ADN57188.1| GTP-binding proten HflX [Burkholderia sp. CCGE1003] Length = 390 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKN 219 + ++G NAGKST ++T+A+ A+ F TL V G + + +++D G I+ Sbjct: 193 VSLVGYTNAGKSTLFNALTKAQAYAANQLFATLDTTSRRVYLGDEAGQVVVSDTVGFIRE 252 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 HQ L+ T +LLH+V A Sbjct: 253 LPHQLVAAFRATLEETIHADLLLHVVDA 280 >gi|326772595|ref|ZP_08231879.1| ferrous iron transport protein B [Actinomyces viscosus C505] gi|326637227|gb|EGE38129.1| ferrous iron transport protein B [Actinomyces viscosus C505] Length = 709 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 30/54 (55%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 I + G PNAGK++ ++T K +YP T+ ++G K G K + D+PG Sbjct: 43 IALAGAPNAGKTSIYNALTGLHAKTGNYPGVTVQRSMGTCKVGGKTLTIEDLPG 96 >gi|168214119|ref|ZP_02639744.1| GTP binding protein [Clostridium perfringens CPE str. F4969] gi|170714354|gb|EDT26536.1| GTP binding protein [Clostridium perfringens CPE str. F4969] Length = 597 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 28/186 (15%) Query: 160 ADIGIIGLPNAGKSTFLASV---------TRAKPKI--ADYPFTTLYPNLGIVK-EGYKE 207 + + ++G NAGKST ++ T+AK K+ AD F TL +K ++ Sbjct: 364 SQVSLVGYTNAGKSTLRNTLCAESASTLATQAKDKVFEADMLFATLDTTTRAIKLPDNRD 423 Query: 208 FILADIPGII-KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELS 263 L D G + K H+ L+ + +L H+V A +N Q A + +L EL Sbjct: 424 ITLTDTVGFVSKLPHELVEAFKSTLEEVIYSDLLCHVVDASSDNAQEEIIAVEKVLGELK 483 Query: 264 AYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGH---GIPQILE 320 A S +I+ L++ID D + K NEL + + + I+ + +LE Sbjct: 484 ALES-----AKILVLNKIDKADEE----KINELEVKYSSIYNKVVKISARERINLDDLLE 534 Query: 321 CLHDKI 326 + +++ Sbjct: 535 AISEEL 540 >gi|326334918|ref|ZP_08201119.1| GTP-binding protein Era [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692955|gb|EGD34893.1| GTP-binding protein Era [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 292 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 2/93 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I IIG PN GKST L ++ + I TT + GIV + I +D PGIIK A Sbjct: 7 INIIGNPNVGKSTLLNALVGERLSIITAKAQTTRHRIFGIVSGEDFQMIFSDTPGIIKPA 66 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQ 252 +Q F++ E +L+++V E++++ Sbjct: 67 YQLQSSMMDFVRDAFEDADILIYMVEIGEKDLK 99 >gi|320168236|gb|EFW45135.1| Gnl3l protein [Capsaspora owczarzaki ATCC 30864] Length = 676 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 20/122 (16%) Query: 124 GFGNAHFKSSTNQAPYYANPGILGQEKIIWL--------KLKLIADIGIIGLPNAGKSTF 175 G+++ ++T + ++ LG + ++ L +K +GIIG PN GKS+ Sbjct: 252 NLGHSNVSTATASSDLLSSSECLGADTLVKLLKNYSRNADIKTTVTVGIIGQPNVGKSSI 311 Query: 176 LASVTRAKPKIADYPFTTLYPNLGIVKEGY-----KEFILADIPGIIKNAHQGAGIGDRF 230 + S+ R+K + P G+ ++ K L D PGI+ G D Sbjct: 312 INSLKRSKA-------CNVGPTPGVTRQAQEIHLDKNIKLLDCPGIVFPDESGTSNPDNV 364 Query: 231 LK 232 L+ Sbjct: 365 LR 366 >gi|308182671|ref|YP_003926798.1| GTP-binding protein Era [Helicobacter pylori PeCan4] gi|308064856|gb|ADO06748.1| GTP-binding protein Era [Helicobacter pylori PeCan4] Length = 301 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 25/173 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYK-EFILADIPG 215 + +IG PNAGKST L ++ A + + + + KEGY+ + I D PG Sbjct: 8 VALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPG 67 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS--ELRKKI 273 + HQ + L L + E V A + D+L Y L +K Sbjct: 68 L---HHQEKLLNQCMLSQA------LKAMGDAELCVFLA--SVHDDLKGYEEFLSLCQKP 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECL 322 I+ LS+IDT + +K E Q VP S+ + +LEC+ Sbjct: 117 HILALSKIDTATHKQVLQKLQEYQQYASQFVDLVP--LSAKKSQNLNALLECI 167 >gi|298736228|ref|YP_003728754.1| GTP-binding protein Era [Helicobacter pylori B8] gi|298355418|emb|CBI66290.1| GTP-binding protein Era [Helicobacter pylori B8] Length = 301 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 70/177 (39%), Gaps = 33/177 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYK-EFILADIPG 215 + +IG PNAGKST L ++ A + + + + KEGY+ + I D PG Sbjct: 8 VALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPG 67 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL----DELSAYNS--EL 269 L+H E+ + AL+ A L D+L Y L Sbjct: 68 ---------------LRHQEKLLNQCMLSQALKAMGDAELCVFLASVHDDLKGYEEFLNL 112 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECL 322 +K I+ L++IDT + +K E Q VP S+ + +LEC+ Sbjct: 113 CQKPHILALNKIDTATHKQVLQKLQEYQKYASQFVDLVP--LSAKKSQNLNALLECI 167 >gi|297794363|ref|XP_002865066.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata] gi|297310901|gb|EFH41325.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata] Length = 427 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGII-KN 219 + ++G+PN GKST + K I D P TT + LGI + IL D PG+I K Sbjct: 132 VAVLGMPNVGKSTLSNQMIGQKISIVTDKPQTTRHRILGICSSPEYQMILYDTPGVIEKK 191 Query: 220 AHQ 222 H+ Sbjct: 192 MHR 194 >gi|258544602|ref|ZP_05704836.1| GTP-binding protein Era [Cardiobacterium hominis ATCC 15826] gi|258520144|gb|EEV89003.1| GTP-binding protein Era [Cardiobacterium hominis ATCC 15826] Length = 300 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 I ++G PN GKST + + K I + P TT + LGI G + I D PGI Sbjct: 8 IAVVGRPNVGKSTLINHLIGQKIAITSKKPQTTRHALLGIHTTGENQIIFVDTPGI 63 >gi|253689379|ref|YP_003018569.1| small GTP-binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259645883|sp|C6DBH0|DER_PECCP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|251755957|gb|ACT14033.1| small GTP-binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 495 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 17/170 (10%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D GI Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIVDTGGI 60 Query: 217 IKNAHQGAGIGDRF----LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G+ R L E ++L +V A + A DE A + R+K Sbjct: 61 DGTED---GVETRMAGQSLVAIEEADIVLFMVDARAGLMPA------DEGIAKHLRSREK 111 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 ++ ++ D +D D + L G+V + ++ G G+ +LE + Sbjct: 112 TTVLVANKTDGLDPDMVTADFYSLG--MGEV-YPIAASHGRGVTSLLETV 158 >gi|164424757|ref|XP_960704.2| hypothetical protein NCU06659 [Neurospora crassa OR74A] gi|157070647|gb|EAA31468.2| hypothetical protein NCU06659 [Neurospora crassa OR74A] Length = 415 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Query: 196 PNLGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 PN G G + L D+ G++ AH+G G+G++FL L+H+V A Sbjct: 61 PNYGSCVNGKRSVPIELLDVAGLVPGAHEGKGLGNKFLDDLRHADALIHVVDA 113 >gi|160892601|ref|ZP_02073391.1| hypothetical protein CLOL250_00131 [Clostridium sp. L2-50] gi|156865642|gb|EDO59073.1| hypothetical protein CLOL250_00131 [Clostridium sp. L2-50] Length = 829 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN+GK+T ++T + + ++P T+ G +K G+K+ I+ D+PGI + Sbjct: 5 IALAGNPNSGKTTLFNALTGSNQYVGNWPGVTVEKKEGKLK-GHKDIIITDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E +++I+ + +E N+ + Q I EL + I+ + Sbjct: 64 YTLEEVVARNYLIKEYPDAIINIIDGTNIERNLYLSTQLI---------ELGIPV-IMAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V + L+ G E S++ G GI ++ E Sbjct: 114 NMMDLVKKNGDKIDIKNLSNALGCEVVEISALKGTGIDEVKE 155 >gi|467091|gb|AAA17274.1| hflX [Mycobacterium leprae] Length = 518 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 11/147 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I I+G NAGKS+ L ++T A + D F TL P + + + F+ D G + Sbjct: 290 IPSIAIVGYTNAGKSSVLNALTGAWVLVQDALFVTLEPTTRHAEFDNGQPFVFTDTVGFV 349 Query: 218 KNAHQGAGIGDRF---LKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAY-NSEL 269 + H + + F L+ +LLH+V + N + A Q I + +S + + + Sbjct: 350 R--HLPTQLVEAFRSTLEEVVDADLLLHVVDGSDANPLAQINAVRQVIFEVISDHQDGGV 407 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNEL 296 E++ +++ID + LA+ ++ L Sbjct: 408 EVPHELLVVNKIDAASALMLAKLRHGL 434 >gi|77551765|gb|ABA94562.1| small GTP-binding protein domain containing protein, expressed [Oryza sativa Japonica Group] gi|218194387|gb|EEC76814.1| hypothetical protein OsI_14944 [Oryza sativa Indica Group] Length = 552 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 21/176 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 I + ++G NAGKST L +T A D F TL P ++ + EF+L D G I Sbjct: 327 IPVVSLVGYTNAGKSTLLNRLTGADVLAEDKLFATLDPTTRRVLMKNGTEFLLTDTVGFI 386 Query: 218 KNAHQGAGIGDR-FLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKI 273 + R L+ + V++H+V L + A +L EL ++ Sbjct: 387 QKLPTMLVAAFRATLEEISESSVIVHLVDISHPLAQQQIDAVDKVLKEL-----DIESIP 441 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQ---CGQVPFEFSSITGHGIPQILECLHDKI 326 ++V ++ID D DTL R K E Q C S+I G G+ + + K+ Sbjct: 442 KLVVWNKIDNTD-DTL-RVKEEAEKQGIIC------ISAINGDGLEEFCNAIQAKL 489 >gi|17229610|ref|NP_486158.1| iron(II) transporter [Nostoc sp. PCC 7120] gi|17131209|dbj|BAB73817.1| iron(II) transporter [Nostoc sp. PCC 7120] Length = 206 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 32/55 (58%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 I ++G+PN GKS ++T +++YP TT+ + G+ + G + + D PG+ Sbjct: 40 IALVGMPNVGKSVLFNTLTGIYVTVSNYPGTTVEVSRGLAQIGEQSITVIDTPGM 94 >gi|322385835|ref|ZP_08059478.1| GTP-binding protein Era [Streptococcus cristatus ATCC 51100] gi|321270120|gb|EFX53037.1| GTP-binding protein Era [Streptococcus cristatus ATCC 51100] Length = 299 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIVIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVEAAYSTLREVDTVLFMVPA-DEPRGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLAQIDDFRQQMDFKEIVP--ISALQGNNVSRLIDILSENL 169 >gi|257865167|ref|ZP_05644820.1| GTP-binding protein [Enterococcus casseliflavus EC30] gi|257871491|ref|ZP_05651144.1| GTP-binding protein [Enterococcus casseliflavus EC10] gi|257874789|ref|ZP_05654442.1| GTP-binding protein [Enterococcus casseliflavus EC20] gi|257799101|gb|EEV28153.1| GTP-binding protein [Enterococcus casseliflavus EC30] gi|257805655|gb|EEV34477.1| GTP-binding protein [Enterococcus casseliflavus EC10] gi|257808955|gb|EEV37775.1| GTP-binding protein [Enterococcus casseliflavus EC20] Length = 414 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 11/110 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP--NLGIVKEGYKEFILADIPGIIKN 219 +G+IG NAGKST L +T A D F TL P + EG+ E + D G I+ Sbjct: 197 MGLIGYTNAGKSTILNILTSADTYEQDQLFATLDPLTKRWRMPEGF-EVTITDTVGFIQE 255 Query: 220 AHQGAGIGDRF---LKHTERTHVLLHIVSA-LEENVQAAYQC--ILDELS 263 + D F L+ ++ LLH+V A EE VQ +++ELS Sbjct: 256 L--PTQLIDAFHSTLEESQNMDFLLHVVDASSEERVQQEETVLKLMEELS 303 >gi|257438512|ref|ZP_05614267.1| ferrous iron transport protein B [Faecalibacterium prausnitzii A2-165] gi|257199091|gb|EEU97375.1| ferrous iron transport protein B [Faecalibacterium prausnitzii A2-165] Length = 729 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 18/158 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K G K+ I+ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNNLTGSNQYVGNWPGVTVEKKEGKLK-GDKDVIIQDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ +L+I+ + +E N+ Q I EL + ++ + Sbjct: 64 YTLEEVVSRTYLVKEKPDAILNIIDGTNIERNLYLTTQLI---------ELGIPV-VMAV 113 Query: 279 SQIDTV--DSDTLARKKNELATQCGQVPFEFSSITGHG 314 + ID V + D + KK L+++ G E S++ G G Sbjct: 114 NMIDLVRKNGDKIDLKK--LSSELGCQAVEISALKGEG 149 >gi|167756809|ref|ZP_02428936.1| hypothetical protein CLORAM_02358 [Clostridium ramosum DSM 1402] gi|237734526|ref|ZP_04565007.1| ferrous iron transporter B [Mollicutes bacterium D7] gi|167702984|gb|EDS17563.1| hypothetical protein CLORAM_02358 [Clostridium ramosum DSM 1402] gi|229382346|gb|EEO32437.1| ferrous iron transporter B [Coprobacillus sp. D7] Length = 727 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 14/159 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN+GK+T ++T + + ++P T+ G +K G+K+ L D+PGI + Sbjct: 5 IALAGNPNSGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLK-GHKDVKLMDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ER +++IV + LE N+ Q + EL + I+ + Sbjct: 64 YTLEEVVARNYLIQERPDAIINIVDGTNLERNLYLTTQIM---------ELGIPV-IMAI 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQ 317 + +D V + +L+ + G E S++ G GI + Sbjct: 114 NMMDIVAKNNDKIDVKKLSKELGCQVVEISALKGKGIKE 152 >gi|87308708|ref|ZP_01090847.1| ferrous iron transport protein b [Blastopirellula marina DSM 3645] gi|87288419|gb|EAQ80314.1| ferrous iron transport protein b [Blastopirellula marina DSM 3645] Length = 743 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 68/169 (40%), Gaps = 18/169 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + +IG PN GKST +++ + + +YP T+ G + G K L D+PG A Sbjct: 12 VALIGNPNTGKSTLFNALSGVRQRTGNYPGVTVEKKHGTFRIGDKSIELIDLPGSYSLAP 71 Query: 222 Q------GAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKI 273 + + L + +L I+ A LE N+ Q + ELR Sbjct: 72 RSPDEMVAVDVLLGRLPAERKPQAVLVILDAGNLERNLYILSQVL---------ELRLP- 121 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 IV L+ ID + LA + G E + G G+ Q+ E L Sbjct: 122 TIVALNMIDVAQDKGVTVDAPLLAQRLGVPVLETRANHGAGVQQLREAL 170 >gi|325663508|ref|ZP_08151918.1| GTP-binding protein HflX [Lachnospiraceae bacterium 4_1_37FAA] gi|325470407|gb|EGC73638.1| GTP-binding protein HflX [Lachnospiraceae bacterium 4_1_37FAA] Length = 417 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 12/127 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 I I+G NAGKST L +T A D F TL P G+ +E +L D G I+ Sbjct: 203 IAIVGYTNAGKSTLLNRLTGASVLEEDKLFATLDPTTRGLKLPSGQEVLLTDTVGFIRKL 262 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKIEI 275 H L+ + ++LH+V ++E + Y+ + N +++ K+ I Sbjct: 263 PHHLIEAFKSTLEEAKYADMILHVVDVSNPQMDEQMYTVYETL------QNLDVKDKVVI 316 Query: 276 VGLSQID 282 ++ D Sbjct: 317 TAFNKQD 323 >gi|125718416|ref|YP_001035549.1| GTP-binding protein Era [Streptococcus sanguinis SK36] gi|323351170|ref|ZP_08086826.1| GTP-binding protein Era [Streptococcus sanguinis VMC66] gi|189037679|sp|A3CP94|ERA_STRSV RecName: Full=GTPase Era gi|125498333|gb|ABN44999.1| Era-like GTP-binding protein, putative [Streptococcus sanguinis SK36] gi|322122394|gb|EFX94105.1| GTP-binding protein Era [Streptococcus sanguinis VMC66] gi|324991449|gb|EGC23382.1| GTP-binding protein Era [Streptococcus sanguinis SK353] gi|325687311|gb|EGD29333.1| GTP-binding protein Era [Streptococcus sanguinis SK72] gi|325690752|gb|EGD32753.1| GTP-binding protein Era [Streptococcus sanguinis SK115] gi|325696180|gb|EGD38071.1| GTP-binding protein Era [Streptococcus sanguinis SK160] gi|327470591|gb|EGF16047.1| GTP-binding protein Era [Streptococcus sanguinis SK330] gi|328946703|gb|EGG40841.1| GTP-binding protein Era [Streptococcus sanguinis SK1087] gi|332358996|gb|EGJ36817.1| GTP-binding protein Era [Streptococcus sanguinis SK49] gi|332362403|gb|EGJ40203.1| GTP-binding protein Era [Streptococcus sanguinis SK1056] Length = 299 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVEAAYSTLREVDTVLFMVPA-DEPRGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + +++ L + + Sbjct: 119 VVNKIDKVHPDQLLAQIDDFRQQMDFKEIVP--ISALQGNNVSHLIDILSENL 169 >gi|150400306|ref|YP_001324073.1| ferrous iron transport protein B [Methanococcus vannielii SB] gi|150013009|gb|ABR55461.1| ferrous iron transport protein B [Methanococcus vannielii SB] Length = 646 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 31/56 (55%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I +IG PN GK+T +T K +I ++P T+ G K K + + D+PGI Sbjct: 6 NIALIGQPNVGKTTLFNQLTGMKQRIGNWPGVTVEKKEGFFKLNDKNYNVVDLPGI 61 >gi|118464862|ref|YP_882795.1| GTPase [Mycobacterium avium 104] gi|118166149|gb|ABK67046.1| GTPase [Mycobacterium avium 104] Length = 482 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 17/165 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + I I+G NAGKS+ L ++T A + D F TL P + + + F+L D G + Sbjct: 258 VPSIAIVGYTNAGKSSLLNALTGAGVLVQDALFATLEPTTRRAEWDDGRAFVLTDTVGFV 317 Query: 218 KNAHQGAGIGDRF---LKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAYNSELR 270 + H + + F L+ +L+H+V + N + A +Q I + ++ ++ E Sbjct: 318 R--HLPTQLVEAFRSTLEEVVDADLLVHVVDGSDVNPLAQIDAVHQVISEVIADHHGE-- 373 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 E++ +++ D LA+ ++ L G V F S+ TG GI Sbjct: 374 PPPELLVVNKTDAAGDVALAKLRHALP---GAV-F-VSAATGDGI 413 >gi|319789668|ref|YP_004151301.1| ribosome-associated GTPase EngA [Thermovibrio ammonificans HB-1] gi|317114170|gb|ADU96660.1| ribosome-associated GTPase EngA [Thermovibrio ammonificans HB-1] Length = 479 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 19/174 (10%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI---- 216 + I+G PN GKST L A V + ++D P TT V+ G EFI D GI Sbjct: 224 VAIVGRPNMGKSTLLNALVGEERAIVSDIPGTTRDAIDTYVRVGDDEFIFIDTAGIRRRG 283 Query: 217 -IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 IK+ + + R L +R V++ +V A E + + L + K + Sbjct: 284 KIKDIEYYSYL--RSLDAIDRADVVVLMVDAQEGPTERDAKIAGMALEKF------KPIV 335 Query: 276 VGLSQIDTV-DSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 + +++IDT+ D R + EL +PF S+ G+ ++L+ + D Sbjct: 336 IAVNKIDTLKDQKEWERLQRELDLVFDFIPFAPRVFISAKERKGLKELLKQIKD 389 >gi|239941036|ref|ZP_04692973.1| GTP-binding protein Era [Streptomyces roseosporus NRRL 15998] gi|239987515|ref|ZP_04708179.1| GTP-binding protein Era [Streptomyces roseosporus NRRL 11379] Length = 324 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 11/151 (7%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I ++ P TT + GIV + IL D PG+ K Sbjct: 31 VGRPNAGKSTLTNALVGQKVAITSNRPQTTRHTVRGIVHRDDAQLILVDTPGLHK---PR 87 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ ++ + + I+ EL+ ++K +I +++ Sbjct: 88 TLLGERLNDVVRTTWAEVDVIGFCLPADQKLGPGDKYIVKELAG----IKKTPKIAIITK 143 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEFSSIT 311 D V+S LA + ++ ++ FE++ I Sbjct: 144 TDLVESKALAEQLLAVSALAEELGFEWAEIV 174 >gi|149919341|ref|ZP_01907823.1| GTP-binding protein, HSR1-related [Plesiocystis pacifica SIR-1] gi|149819841|gb|EDM79265.1| GTP-binding protein, HSR1-related [Plesiocystis pacifica SIR-1] Length = 583 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 3/94 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + I+G NAGKST L +VT ++ + F TL P + V+ +E ++ D G I+ Sbjct: 401 VAIVGYTNAGKSTLLNTVTESEVIAENKLFATLDPTVRRVRFPDEREVVMLDTVGFIREL 460 Query: 221 HQGAGIG-DRFLKHTERTHVLLHIVSALE-ENVQ 252 L+ +LLH+V A + +N Q Sbjct: 461 PPALMQAFSATLEEVAEADLLLHVVDATDPDNTQ 494 >gi|28198002|ref|NP_778316.1| GTP-binding protein [Xylella fastidiosa Temecula1] gi|182680628|ref|YP_001828788.1| GTP-binding proten HflX [Xylella fastidiosa M23] gi|28056062|gb|AAO27965.1| GTP-binding protein [Xylella fastidiosa Temecula1] gi|182630738|gb|ACB91514.1| GTP-binding proten HflX [Xylella fastidiosa M23] gi|307579087|gb|ADN63056.1| GTP-binding proten HflX [Xylella fastidiosa subsp. fastidiosa GB514] Length = 450 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 1/89 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + I ++G N+GKST ++T A A+ F TL P + + +LAD G ++ Sbjct: 198 VPRIALVGYTNSGKSTLFNALTGASAYTANQLFATLDPKVRRIVLPGSSAMLADTVGFVR 257 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSA 246 + H+ L +LLH++ A Sbjct: 258 HLPHELVAAFRSTLSEAREADLLLHVIDA 286 >gi|116627505|ref|YP_820124.1| GTP-binding protein Era [Streptococcus thermophilus LMD-9] gi|116100782|gb|ABJ65928.1| GTPase [Streptococcus thermophilus LMD-9] gi|312278024|gb|ADQ62681.1| GTP-binding protein [Streptococcus thermophilus ND03] Length = 299 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 15/171 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A E + D++ + K I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPADEPRGKG------DDMIIKRLKQAKVPVIL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q + S++ G+ + +++ L D + Sbjct: 119 VVNKIDKVHPDQLLEQIDDFRKQMDFKEIIPISALQGNNVSHLVDVLSDNL 169 >gi|116051824|ref|YP_789333.1| GTP-binding protein EngA [Pseudomonas aeruginosa UCBPP-PA14] gi|122260971|sp|Q02RV3|DER_PSEAB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|115587045|gb|ABJ13060.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa UCBPP-PA14] Length = 493 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 9/136 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +T+++ I A+Y T G + + +I+ D GI Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEARWQGRTYIVIDTGGI 60 Query: 217 IKNAHQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + A + ++ L+ E +L +V + + AA Q I + L R K Sbjct: 61 SGDEEGIDAKMAEQSLQAIEEADAVLFLVDS-RAGMTAADQMIAEHLRK-----RNKRSF 114 Query: 276 VGLSQIDTVDSDTLAR 291 + +++DT+D D LAR Sbjct: 115 LIANKVDTIDPD-LAR 129 >gi|186684896|ref|YP_001868092.1| GTP-binding protein, HSR1-related [Nostoc punctiforme PCC 73102] gi|186467348|gb|ACC83149.1| GTP-binding protein, HSR1-related [Nostoc punctiforme PCC 73102] Length = 530 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 11/95 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEG----YKEFILAD 212 + + ++G NAGKST L ++T A+ AD F TL P ++ G ++E ++ D Sbjct: 356 VPSVALVGYTNAGKSTLLNALTNAEVYTADQLFATLDPTTRRLVIPYGETNEHQEILITD 415 Query: 213 IPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIV 244 G I A + D F L+ LLH+V Sbjct: 416 TVGFIHEL--PASLMDAFRATLEEVTEADALLHLV 448 >gi|42523420|ref|NP_968800.1| GTP-binding protein Era [Bdellovibrio bacteriovorus HD100] gi|39575626|emb|CAE79793.1| GTP-binding protein Era [Bdellovibrio bacteriovorus HD100] Length = 303 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 4/100 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 +G+IG PNAGKST + + K I + P TT LGI + I D PG+IK A Sbjct: 8 LGLIGQPNAGKSTLMNFLVDEKVSIVSSKPQTTRRRILGIWSTEKGQVIFVDAPGLIK-A 66 Query: 221 HQGAG--IGDRFLKHTERTHVLLHIVSALEENVQAAYQCI 258 +G + + LL I++ EE + A + I Sbjct: 67 DEGLNGFLAQEAHDVINSSDALLAIIAVDEEKPENAEKVI 106 >gi|322514868|ref|ZP_08067886.1| ribosome-associated GTPase EngA [Actinobacillus ureae ATCC 25976] gi|322119172|gb|EFX91317.1| ribosome-associated GTPase EngA [Actinobacillus ureae ATCC 25976] Length = 505 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 13/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHANIAGYDFIVVDTGG-IDGT 63 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A + A D A R+K +V Sbjct: 64 EEGVEEKMAEQSLLAIEEADVVLFLVDARAGLLPA------DIGIAQYLRQREKTTVVVA 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G+V + ++ G G+ Q++E Sbjct: 118 NKTDGIDADSHCAEFYQLG--LGEVE-QIAAAQGRGVTQLIE 156 >gi|307825475|ref|ZP_07655693.1| ferrous iron transport protein B [Methylobacter tundripaludum SV96] gi|307733361|gb|EFO04220.1| ferrous iron transport protein B [Methylobacter tundripaludum SV96] Length = 781 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 64/130 (49%), Gaps = 17/130 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 +G++G PN GK+T ++T A+ + ++P T+ G +K L D+PG ++ Sbjct: 7 VGVVGNPNCGKTTLFNALTGARQHVGNWPGVTVEKKTGAYSFDHKLIELVDLPGTYSLEA 66 Query: 220 AHQGAGIGDRFLKH---TERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 A + ++ + +++ ++++IV A LE N+ Q I E+R + Sbjct: 67 ADDQVSLDEKVARDYVASKQADLIINIVDASNLERNLYLTAQLI---------EMRVPMI 117 Query: 275 IVGLSQIDTV 284 +V L+ +D V Sbjct: 118 LV-LNMMDAV 126 >gi|332652700|ref|ZP_08418445.1| ferrous iron transport protein B [Ruminococcaceae bacterium D16] gi|332517846|gb|EGJ47449.1| ferrous iron transport protein B [Ruminococcaceae bacterium D16] Length = 827 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 36/160 (22%), Positives = 74/160 (46%), Gaps = 14/160 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 + ++G PN GK+T ++T A + ++P T+ G +K G+ + + D+PGI + Sbjct: 5 MALVGNPNCGKTTMFNAMTGANQYVGNWPGVTVEKKEGKLK-GHPDVTVTDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E V++++V A +E N+ Q + EL + +V L Sbjct: 64 YTLEEVVSRNYLLNEHPDVIINLVDATNIERNLYLTTQVL---------ELGIPV-VVAL 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 + +D + +L+ + G E S++ G G+ ++ Sbjct: 114 NMMDVIKKRGDQINSIKLSEKLGCPVIEVSALRGSGLKEL 153 >gi|188533139|ref|YP_001906936.1| GTP-binding protein Era [Erwinia tasmaniensis Et1/99] gi|188028181|emb|CAO96039.1| GTP-binding protein [Erwinia tasmaniensis Et1/99] Length = 301 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 IAIVGRPNVGKSTLLNQLLGQKVSITSRKPQTTRHRIMGIHTEGQYQAIYVDTPGL 66 >gi|91201100|emb|CAJ74159.1| strongly similar to GTP-binding protein Era [Candidatus Kuenenia stuttgartiensis] Length = 301 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 69/135 (51%), Gaps = 18/135 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIV-KEGYKEFILADIPGIIKN 219 + +IG PN GKST + + K I + P TT +GI+ KE Y + I D PGII+ Sbjct: 15 VAVIGEPNVGKSTLINNYMGCKLSIVTHKPQTTRKKIMGILTKEDY-QIIFFDTPGIIEP 73 Query: 220 AHQGAGIGDRFLKHT-----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 ++ +++ T + +LL +V ++ + ++ ++ +L+ +N + Sbjct: 74 TYE----LQKYMVKTAYSVIKEADILLMMVEPFKQPAK-IHRDVVKKLATFNKPI----- 123 Query: 275 IVGLSQIDTVDSDTL 289 ++ ++++D V+ D L Sbjct: 124 LLVINKVDMVEKDKL 138 >gi|24216333|ref|NP_713814.1| GTP-binding protein [Leptospira interrogans serovar Lai str. 56601] gi|24197609|gb|AAN50832.1|AE011519_1 GTP-binding protein [Leptospira interrogans serovar Lai str. 56601] Length = 518 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 38/202 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILA-------DI 213 +GI+G NAGKSTFL ++T ++ + F TL P ++ +E I++ D+ Sbjct: 317 VGIVGYTNAGKSTFLNALTNSEVLSENKLFATLDPTTRRIRFPEEREIIISDTVGFIHDL 376 Query: 214 PGIIKNAHQGA--GIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELS----- 263 P + NA + +GD + +L+H+V + + A + IL+EL Sbjct: 377 PPELSNAFKATLEELGD--------SDLLVHVVDVSNPDYKLQMEAVEKILEELELSHIP 428 Query: 264 ---AYNS--ELRK-KIEIV--GLSQIDTVDS----DTLARKKNELATQCGQVPFEFSSIT 311 +N L K KI ++ G + +V+ + + K EL S+ Sbjct: 429 MIQVFNKIDRLEKFKIWVIENGYKKSSSVNHGPGLEAITDLKEELGIDTFSDSILVSAFQ 488 Query: 312 GHGIPQILECLHDKIFSIRGEN 333 G G+ L+ L D+I+++ N Sbjct: 489 GWGLKTFLDLLEDRIYNLSRSN 510 >gi|332527857|ref|ZP_08403894.1| GTP-binding protein Der [Rubrivivax benzoatilyticus JA2] gi|332112434|gb|EGJ12227.1| GTP-binding protein Der [Rubrivivax benzoatilyticus JA2] Length = 447 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 8/161 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST +T+++ I AD+ T + G + G +EFI+ D G Sbjct: 5 IALVGRPNVGKSTLFNRITKSRDAIVADFAGLTRDRHYGDARLGGREFIVVDTGGF--EP 62 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 + +G+ K T R V V +++A +++ + +KK+ I+ +++ Sbjct: 63 EKPSGVVAEMAKQT-RQAVAEADVVVFVADLRAGVSAQDHDIARFLRTQQKKV-ILAVNK 120 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 + + L + +EL G+ P S+ G G+ +LE Sbjct: 121 AEGMAESPLLAEFHELG--IGE-PHPLSASHGQGVRSLLEA 158 >gi|329297578|ref|ZP_08254914.1| GTP-binding protein Der [Plautia stali symbiont] Length = 496 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 13/167 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G + +EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGG- 59 Query: 217 IKNAHQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L +V A V A Q I + L + R K Sbjct: 60 IDGTEEGVENRMAEQSLLAIEEADVVLFLVDA-RAGVMPADQQIANHLRS-----RDKAT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 ++ D +D D A + A G++ ++ G G+ +LE Sbjct: 114 FFVANKTDGLDPD--AAVLDFYALGLGEI-HPIAASHGRGVTSLLET 157 >gi|305663700|ref|YP_003859988.1| small GTP-binding protein [Ignisphaera aggregans DSM 17230] gi|304378269|gb|ADM28108.1| small GTP-binding protein [Ignisphaera aggregans DSM 17230] Length = 718 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 32/55 (58%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + +IG P+ GKS ++T A K+A +P TT+ +G V+ + + D+PGI Sbjct: 33 VALIGQPSVGKSALFNALTGASVKVASFPGTTVEYKVGRVRYKGRSICVVDLPGI 87 >gi|194476719|ref|YP_002048898.1| ferrous iron transport protein B [Paulinella chromatophora] gi|171191726|gb|ACB42688.1| ferrous iron transport protein B [Paulinella chromatophora] Length = 605 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 7/102 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYP-FTTLYPNLGIVKEGYKE---FILADIPGI- 216 + ++G+PN GKST +++ + I ++P T I+ + +E IL D+PGI Sbjct: 11 VALLGMPNTGKSTLFNALSGSHAHIGNWPGLTVDLLQAEIIIDNNQEEKSIILVDLPGIY 70 Query: 217 -IKNAHQGAGIGDRFLKHTERTHVLLHI-VSALEENVQAAYQ 256 ++ + + RFL HT +++ + S ++ ++ A Q Sbjct: 71 DLRGFSEDEAVVQRFLDHTPPDLIIIVLNASQIDRQLRLALQ 112 >gi|312863009|ref|ZP_07723247.1| ribosome biogenesis GTPase Era [Streptococcus vestibularis F0396] gi|322517151|ref|ZP_08070035.1| GTP-binding protein Era [Streptococcus vestibularis ATCC 49124] gi|311100545|gb|EFQ58750.1| ribosome biogenesis GTPase Era [Streptococcus vestibularis F0396] gi|322124301|gb|EFX95812.1| GTP-binding protein Era [Streptococcus vestibularis ATCC 49124] Length = 299 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 15/171 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTEKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEPRGKGDDMIIERLKQAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q + S++ G+ + +++ L D + Sbjct: 119 VVNKIDKVHPDQLLEQIDDFRKQMDFKEIIPISALQGNNVSHLVDVLSDNL 169 >gi|292489089|ref|YP_003531976.1| GTP-binding protein Era [Erwinia amylovora CFBP1430] gi|292900213|ref|YP_003539582.1| GTP-binding protein [Erwinia amylovora ATCC 49946] gi|291200061|emb|CBJ47187.1| GTP-binding protein [Erwinia amylovora ATCC 49946] gi|291554523|emb|CBA22092.1| GTP-binding protein Era [Erwinia amylovora CFBP1430] gi|312173247|emb|CBX81502.1| GTP-binding protein Era [Erwinia amylovora ATCC BAA-2158] Length = 301 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 IAIVGRPNVGKSTLLNQLLGQKVSITSRKPQTTRHRIMGIHTEGQYQAIYVDTPGL 66 >gi|262304225|gb|ACY44705.1| GTP-binding protein [Craterostigmus tasmanianus] Length = 280 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---ELSAYN 266 + DI G++K A +G G+G+ FL H L H+ A +++ + +D +L N Sbjct: 35 VVDIAGLVKGASEGQGLGNAFLAHISACEALFHMCRAFDDDDVTHIEGEVDPIRDLEIIN 94 Query: 267 SELR-KKIEIVGL 278 ELR K +E +G+ Sbjct: 95 EELRLKDVENLGI 107 >gi|150401164|ref|YP_001324930.1| ferrous iron transport protein B [Methanococcus aeolicus Nankai-3] gi|150013867|gb|ABR56318.1| ferrous iron transport protein B [Methanococcus aeolicus Nankai-3] Length = 648 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 9/149 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNA 220 + ++G PN GK+T +T + KI ++ T+ GI+K+G KE+ + D+PGI Sbjct: 5 VSLVGQPNVGKTTLFNLLTGMRQKIGNWAGVTVEKKEGILKDGSNKEYAVVDLPGIY--- 61 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 + + D + R ++L + S + NV + K I+ L+ Sbjct: 62 ---SLMSDSIDQKIARDYILKY--SDIVVNVVDTPNINRNLYLTLQLLELGKFPILCLNL 116 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEFSS 309 ID + L +L+ + G +P SS Sbjct: 117 IDEAEKHGLQLDIKKLSEKLGNLPIITSS 145 >gi|37527215|ref|NP_930559.1| GTP-binding protein Era [Photorhabdus luminescens subsp. laumondii TTO1] gi|36786649|emb|CAE15713.1| GTP-binding protein era [Photorhabdus luminescens subsp. laumondii TTO1] Length = 302 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 VAIVGRPNVGKSTLLNQLLGQKVSITSRKPQTTRHRIMGIHTEGAYQIIYVDTPGL 66 >gi|120555159|ref|YP_959510.1| GTP-binding protein Era [Marinobacter aquaeolei VT8] gi|189037652|sp|A1U2V4|ERA_MARAV RecName: Full=GTPase Era gi|120325008|gb|ABM19323.1| GTP-binding protein Era [Marinobacter aquaeolei VT8] Length = 305 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ Sbjct: 17 VAIVGRPNVGKSTLLNHILGQKLSITSRKPQTTRHQVLGIKTEGPVQAIYVDTPGM 72 >gi|325681534|ref|ZP_08161059.1| ribosome biogenesis GTPase Era [Ruminococcus albus 8] gi|324106801|gb|EGC01092.1| ribosome biogenesis GTPase Era [Ruminococcus albus 8] Length = 298 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 32/145 (22%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I G NAGKS+ L ++ K ++D P TT G++ +G +F+ D PG+ Sbjct: 7 VTIAGRANAGKSSLLNALVGEKIAAVSDKPQTTRTKITGVLTKGETQFVFMDTPGM---- 62 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL-----DELSAYNSEL------ 269 H + + H+V+ + E + IL ++S L Sbjct: 63 ------------HKAKNKLSEHMVNTVNETIAGVDMIILMCDCTKKISDNEKSLIQSFKG 110 Query: 270 -RKKIEIVGLSQIDTVDS--DTLAR 291 R K+ I+ L++ID +D+ D +A+ Sbjct: 111 GRSKV-ILALNKIDLLDNKEDVIAK 134 >gi|256810052|ref|YP_003127421.1| small GTP-binding protein [Methanocaldococcus fervens AG86] gi|256793252|gb|ACV23921.1| small GTP-binding protein [Methanocaldococcus fervens AG86] Length = 341 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 4/62 (6%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 K + + I G PN GKST L +T A +I YPFTT N+G + + + D PG Sbjct: 169 FKELPTVVIAGYPNVGKSTLLKKLTGADVEINSYPFTTKGINVGYL----DDIQMVDTPG 224 Query: 216 II 217 ++ Sbjct: 225 LL 226 >gi|182438802|ref|YP_001826521.1| GTP-binding protein Era [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467318|dbj|BAG21838.1| putative Era/ThdF-family GTP-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 324 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 11/151 (7%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I ++ P TT + GIV + IL D PG+ K Sbjct: 31 VGRPNAGKSTLTNALVGQKVAITSNRPQTTRHTVRGIVHRDDAQLILVDTPGLHK---PR 87 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ ++ + + I+ EL+ ++K +I +++ Sbjct: 88 TLLGERLNDVVRTTWAEVDVIGFCLPADQKLGPGDKYIVKELAG----IKKTPKIAIITK 143 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEFSSIT 311 D V+S LA + ++ ++ FE++ I Sbjct: 144 TDLVESKALAEQLLAVSALAEELGFEWAEIV 174 >gi|309811062|ref|ZP_07704860.1| ribosome biogenesis GTPase Era [Dermacoccus sp. Ellin185] gi|308435026|gb|EFP58860.1| ribosome biogenesis GTPase Era [Dermacoccus sp. Ellin185] Length = 314 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 8/131 (6%) Query: 164 IIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 ++G PNAGKST ++ K I + P TT + GIV + +L D PG+ K Sbjct: 20 LVGRPNAGKSTLTNALVGDKVAITSSKPQTTRHTIRGIVTRPDGQIVLVDTPGLHKPR-- 77 Query: 223 GAGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 +G+R T + + ++ ++ + Q I +L+ +RK+ + ++ Sbjct: 78 -TLLGERLNDVVRETLLDVDVIGFCLPADQKIGPGDQFIAKDLAELQ-RVRKRPVVALVT 135 Query: 280 QIDTVDSDTLA 290 + DTVD + LA Sbjct: 136 KTDTVDRERLA 146 >gi|332652574|ref|ZP_08418319.1| GTP-binding protein Era [Ruminococcaceae bacterium D16] gi|332517720|gb|EGJ47323.1| GTP-binding protein Era [Ruminococcaceae bacterium D16] Length = 298 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 30/176 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I + G PN GKST ++ K I + P TT I+ G +F+ D PG+ Sbjct: 9 ITLCGRPNVGKSTLTNALVGEKVAIVTNKPQTTRNRITAILNRGESQFVFVDTPGL---- 64 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL-----DELSAYNSELRKKIEI 275 H RT + ++V+ ++E+V +L + A +L +I+ Sbjct: 65 ------------HKARTRLGDYMVNVVKESVADVDGIMLLVEPIPNIGAPEQQLIDRIKT 112 Query: 276 VGLSQIDTVDS-DTLARKKNEL-ATQCGQVPFEFSSI------TGHGIPQILECLH 323 +G + ++ DTL +K+ L Q +F+++ TG G+ ++L L Sbjct: 113 LGCPSVLVINKVDTLEQKEKLLEVIQVYTQAHDFTAVVPISAKTGEGVDELLNVLE 168 >gi|159155770|gb|AAI54965.1| LOC100127247 protein [Xenopus laevis] Length = 359 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + I IIG PNAGKST + R ++ TT G++ EG + IL D PG++ Sbjct: 1 VLRIAIIGAPNAGKSTLSNQLLGRKVFPVSKKVHTTRCQAQGVITEGETQLILLDTPGMV 60 >gi|317125259|ref|YP_004099371.1| GTP-binding protein Era [Intrasporangium calvum DSM 43043] gi|315589347|gb|ADU48644.1| GTP-binding protein Era [Intrasporangium calvum DSM 43043] Length = 322 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 8/131 (6%) Query: 164 IIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 ++G PNAGKST ++ K I + P TT + G+ + IL D PG+ K Sbjct: 30 LVGRPNAGKSTLTNALVGQKVAITSSKPQTTRHTIRGVATTSTAQLILVDTPGLHKPRTL 89 Query: 223 GAGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 +G+R T + + +V ++ + I EL S R+ + + + Sbjct: 90 ---LGERLNDLVRETLLEVDVVGFCLPADQRIGPGDAFIARELEELRSVRRRPVVAIA-T 145 Query: 280 QIDTVDSDTLA 290 + DTVD + LA Sbjct: 146 KADTVDRERLA 156 >gi|257094483|ref|YP_003168124.1| GTP-binding proten HflX [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047007|gb|ACV36195.1| GTP-binding proten HflX [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 390 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 6/92 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL---YPNLGIVKEGYKEFILADIPG 215 + ++ ++G NAGKST S+T A AD F TL L + + G+ +L+D G Sbjct: 197 LLNVSLVGYTNAGKSTLFNSLTHAGVFAADQLFATLDTTTRKLWLAEAGH--IVLSDTVG 254 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSA 246 I++ H L+ T +LLH+V + Sbjct: 255 FIRDLPHSLVAAFHATLEATAEADLLLHVVDS 286 >gi|224368206|ref|YP_002602369.1| FeoB1 [Desulfobacterium autotrophicum HRM2] gi|223690922|gb|ACN14205.1| FeoB1 [Desulfobacterium autotrophicum HRM2] Length = 723 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 13/140 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T A+ K+ ++P T+ G+VK + D+PG Sbjct: 6 IALAGNPNCGKTTIFNNLTGARQKVGNWPGVTVEKKEGVVKHKGLDLKFVDLPGTYSLTP 65 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 I R E+ V+++I+ A LE ++ A Q + EL + + V L Sbjct: 66 FSLEEIVARDFILNEKPDVVVNIIDAANLERSLYLAMQIM---------ELDRPVVFV-L 115 Query: 279 SQIDTVDSDTLARKKNELAT 298 + D S L+ +L+T Sbjct: 116 NMADLAKSKGLSINAAKLST 135 >gi|156088319|ref|XP_001611566.1| nucleolar GTP-binding protein 1 [Babesia bovis T2Bo] gi|154798820|gb|EDO07998.1| nucleolar GTP-binding protein 1, putative [Babesia bovis] Length = 588 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + G PN GKS+F+ V++A + Y FTT +G Y + + D PG++ Sbjct: 177 LTGYPNVGKSSFMNQVSKANVDVQPYSFTTKSLYVGHFDHDYLRWQVIDTPGLL 230 >gi|313888957|ref|ZP_07822617.1| ribosome biogenesis GTPase Era [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845130|gb|EFR32531.1| ribosome biogenesis GTPase Era [Peptoniphilus harei ACS-146-V-Sch2b] Length = 301 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 12/133 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PN GKST L ++ K I+ P TT I + + I D PGI K Sbjct: 11 VSVIGRPNVGKSTLLNAIIGEKISAISSKPQTTRQNITFIHTDEDAQIIFLDTPGIQKPK 70 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ +G+ L + E + V+ +IV + + A + I+D L Y +L I+ Sbjct: 71 NK---LGEFMLTESKEGIEDSDVITYIVDT-SKKIGRAERSIIDILKEYKGKLPI---IL 123 Query: 277 GLSQIDTVDSDTL 289 ++++DT+ D L Sbjct: 124 LINKVDTIRKDEL 136 >gi|261493816|ref|ZP_05990330.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261310519|gb|EEY11708.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 511 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 13/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHANIAGYDFIVIDTGG-IDGT 63 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A + A D A R+K +V Sbjct: 64 EEGVEEKMAEQSLLAIEEADVVLFLVDARAGLLPA------DVGIAQYLRQREKTTVVVA 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G+V + ++ G G+ Q++E Sbjct: 118 NKTDGIDADSHCAEFYQLG--LGEVE-QIAAAQGRGVTQLIE 156 >gi|229829590|ref|ZP_04455659.1| hypothetical protein GCWU000342_01687 [Shuttleworthia satelles DSM 14600] gi|229791579|gb|EEP27693.1| hypothetical protein GCWU000342_01687 [Shuttleworthia satelles DSM 14600] Length = 769 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 18/164 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T A+ + ++P T+ G +K G+ + + D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNNLTGARQYVGNWPGVTVEKKEGKLK-GHNDVTIQDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ V+L+IV + +E N+ Q + EL + ++ + Sbjct: 64 YTLEEVVSRQYLVEEKPDVILNIVDGTNIERNLYLTTQLM---------ELGTPV-VLAV 113 Query: 279 SQIDTV--DSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V + D++ KK LA + G E S++ Q E Sbjct: 114 NMMDLVRKNGDSIDVKK--LAVELGVPTIEISALKNESTTQAAE 155 >gi|194387188|dbj|BAG59960.1| unnamed protein product [Homo sapiens] Length = 217 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 37/74 (50%) Query: 179 VTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 +T + A Y FTTL G+++ L D+PGII+ A QG G G + + Sbjct: 1 MTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEGAAQGKGRGRQVIAVARTAD 60 Query: 239 VLLHIVSALEENVQ 252 V++ ++ A + VQ Sbjct: 61 VIIMMLDATKGEVQ 74 >gi|116196432|ref|XP_001224028.1| hypothetical protein CHGG_04814 [Chaetomium globosum CBS 148.51] gi|88180727|gb|EAQ88195.1| hypothetical protein CHGG_04814 [Chaetomium globosum CBS 148.51] Length = 637 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 5/54 (9%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + G PN GKS+F+ SVTRA + Y F +G + Y + + D PGI+ Sbjct: 164 VAGFPNVGKSSFVRSVTRADTPVEPYAFF-----VGHLDYKYLRYQVIDTPGIL 212 >gi|288941004|ref|YP_003443244.1| ribosome-associated GTPase EngA [Allochromatium vinosum DSM 180] gi|288896376|gb|ADC62212.1| ribosome-associated GTPase EngA [Allochromatium vinosum DSM 180] Length = 467 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I +IG PN GKST +TR + +AD+P T GI + G + +++ D GI Sbjct: 1 MLPVITLIGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRQYGIGRIGPRPYVIVDTGGI 60 >gi|303274084|ref|XP_003056366.1| predicted protein [Micromonas pusilla CCMP1545] gi|226462450|gb|EEH59742.1| predicted protein [Micromonas pusilla CCMP1545] Length = 605 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 21/156 (13%) Query: 121 GNGGFGNAHFKSSTNQAPY---YANPGILGQEKIIWL--------KLKLIADIGIIGLPN 169 G G++ K + P Y LG E ++ L LK +GI+G PN Sbjct: 228 ATGSAGSSSNKLGSRALPTQGTYGGKDALGAETLLQLLKNYARSRNLKRAITVGIVGFPN 287 Query: 170 AGKSTFLASVTRAK--PKIADYP-FTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGI 226 GKS+ + S+ R++ + + P FTT+ + + K+ L D PG+I + G Sbjct: 288 VGKSSLINSLKRSRYAAAVGNTPGFTTVSKEITL----DKQIKLIDSPGVIFASSLGESA 343 Query: 227 GDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 G L++ + L ++ + E ++ +C ++L Sbjct: 344 GSVALRNCIKIEKLTDPIAPVGEILR---RCPAEQL 376 >gi|238606909|ref|XP_002396842.1| hypothetical protein MPER_02840 [Moniliophthora perniciosa FA553] gi|215470139|gb|EEB97772.1| hypothetical protein MPER_02840 [Moniliophthora perniciosa FA553] Length = 101 Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 1/38 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNL 198 IGI+GLPN GKS+F +++ + A+YP+ T+ P + Sbjct: 48 IGIVGLPNVGKSSFFNALSNTSLGVAANYPYATINPEV 85 >gi|75907298|ref|YP_321594.1| small GTP-binding protein domain-containing protein [Anabaena variabilis ATCC 29413] gi|75701023|gb|ABA20699.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC 29413] Length = 206 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 32/55 (58%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 I ++G+PN GKS ++T +++YP TT+ + G+ + G + + D PG+ Sbjct: 40 IALVGMPNVGKSVLFNALTGIYVTVSNYPGTTVEVSRGLAQIGEQSITVIDTPGM 94 >gi|53804478|ref|YP_113919.1| GTP-binding protein Era [Methylococcus capsulatus str. Bath] gi|53758239|gb|AAU92530.1| GTP-binding protein Era [Methylococcus capsulatus str. Bath] Length = 293 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST L + K I P TT + LGI +G + I D PGI A Sbjct: 6 VALVGRPNVGKSTLLNHLLGQKLSIVSRRPQTTRHRILGIKTDGRGQVIYVDTPGIHGGA 65 Query: 221 HQGAGIGDRFLKHTERTHVL 240 + +R+L T + +L Sbjct: 66 RRAM---NRYLNRTAISSLL 82 >gi|73662498|ref|YP_301279.1| GTP-binding protein Era [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|82592828|sp|Q49Y10|ERA_STAS1 RecName: Full=GTPase Era gi|72495013|dbj|BAE18334.1| putative GTPase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 299 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 14/133 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I IIG PN GKSTF+ V K I +D TT G++ + + I D PGI K Sbjct: 9 ISIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQEDAQIIFLDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD ++ T ++ +V+ + E++ + I++ L + + + Sbjct: 69 HK---LGDYMMRVATNTLSEIDAIMFMVN-VNEDIGRGDEYIMEMLKTIKTPV-----FL 119 Query: 277 GLSQIDTVDSDTL 289 L++ID V D L Sbjct: 120 VLNKIDLVHPDEL 132 >gi|332527859|ref|ZP_08403896.1| GTP-binding proten HflX [Rubrivivax benzoatilyticus JA2] gi|332112436|gb|EGJ12229.1| GTP-binding proten HflX [Rubrivivax benzoatilyticus JA2] Length = 371 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 12/112 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN-----LGIVKEGYKEFILADIPGI 216 + ++G NAGKST ++ +AK AD F TL LG E L+D G Sbjct: 191 VSLVGYTNAGKSTLFNALVKAKTYAADQLFATLDTTTRSLWLG---EAGMSVSLSDTVGF 247 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENV---QAAYQCILDELSA 264 I++ H+ + L+ +LLH+V A + QA + +L+E+ A Sbjct: 248 IRDLPHKLVEAFEATLREAADADLLLHVVDAASPALLEQQAEVERVLEEIGA 299 >gi|303245062|ref|ZP_07331382.1| ferrous iron transport protein B [Methanothermococcus okinawensis IH1] gi|302484581|gb|EFL47525.1| ferrous iron transport protein B [Methanothermococcus okinawensis IH1] Length = 673 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 23/183 (12%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 +I +IG PN GKST ++T K I ++P T+ G K G ++ + D+PG+ Sbjct: 4 EIALIGNPNTGKSTVFNALTGLKQHIGNWPGVTVEKKEGEFKYGGFKYKVVDLPGVYGLT 63 Query: 221 HQGAG--IGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCI--------------LDEL 262 + + ++ + E+ +V++ IV A +E N+ +Q + L + Sbjct: 64 ARSVDEQVARDYIIN-EKPNVVVDIVDASNIERNLYLTFQLLEIGANVVIALNKMDLAKE 122 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDT--LARKKNELATQCGQVPFEFSSITGHGIPQILE 320 YN ++++ E++G+ + + S + K + G+ P E I + P IL Sbjct: 123 MGYNIDVKRLEELLGVPVVPMIASKEQGIEELKKTIDKSIGKKPSE--VIYSNFEPYILR 180 Query: 321 CLH 323 ++ Sbjct: 181 LIN 183 >gi|154150513|ref|YP_001404131.1| ferrous iron transport protein B [Candidatus Methanoregula boonei 6A8] gi|153999065|gb|ABS55488.1| ferrous iron transport protein B [Methanoregula boonei 6A8] Length = 666 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 3/100 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GKST ++T ++ + ++P T+ G G E + D+PG A Sbjct: 7 IALAGNPNVGKSTIFNTLTGSRQHVGNWPGVTVEKKSGFATVGNTEIEIVDLPGTYSLTA 66 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCI 258 + + R ER V++HIV A E N+ Q + Sbjct: 67 YSVDEVVARDYIIEERPDVVIHIVDATNFERNLYLTTQLM 106 >gi|15827476|ref|NP_301739.1| ATP/GTP-binding protein [Mycobacterium leprae TN] gi|221229953|ref|YP_002503369.1| putative ATP/GTP-binding protein [Mycobacterium leprae Br4923] gi|13093026|emb|CAC31378.1| possible ATP/GTP-binding protein [Mycobacterium leprae] gi|219933060|emb|CAR71092.1| possible ATP/GTP-binding protein [Mycobacterium leprae Br4923] Length = 488 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 11/147 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I I+G NAGKS+ L ++T A + D F TL P + + + F+ D G + Sbjct: 260 IPSIAIVGYTNAGKSSVLNALTGAWVLVQDALFVTLEPTTRHAEFDNGQPFVFTDTVGFV 319 Query: 218 KNAHQGAGIGDRF---LKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAY-NSEL 269 + H + + F L+ +LLH+V + N + A Q I + +S + + + Sbjct: 320 R--HLPTQLVEAFRSTLEEVVDADLLLHVVDGSDANPLAQINAVRQVIFEVISDHQDGGV 377 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNEL 296 E++ +++ID + LA+ ++ L Sbjct: 378 EVPHELLVVNKIDAASALMLAKLRHGL 404 >gi|302340172|ref|YP_003805378.1| GTP-binding protein Era [Spirochaeta smaragdinae DSM 11293] gi|301637357|gb|ADK82784.1| GTP-binding protein Era [Spirochaeta smaragdinae DSM 11293] Length = 294 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 20/182 (10%) Query: 160 ADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 A I +IG P+ GKST + + R +A P TT GI+ E + + AD PG Sbjct: 6 AWITLIGRPSVGKSTLVNCLCGRKISIVAPSPQTTRSTVRGILTEERGQLVFADTPGY-- 63 Query: 219 NAHQGAGIGDRFLKHT-----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 H +R+LK E ++L+I+ A Q E++ + L +K+ Sbjct: 64 --HISDKKLNRYLKTATEAALEECELVLYIIDATRSAGQEE-----REIAGLLAPLAEKL 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 +V +++ D ++ A + G+ F S+ TG G E L + +F + E Sbjct: 117 -VVAINKNDLPEASVPAAETAAAEAFPGRPIFTISAETGEGT----EALLNTLFELSPEG 171 Query: 334 EF 335 E Sbjct: 172 EL 173 >gi|271963792|ref|YP_003337988.1| GTP-binding family protein [Streptosporangium roseum DSM 43021] gi|270506967|gb|ACZ85245.1| GTP-binding family protein ; K03665 GTP-binding protein HflX [Streptosporangium roseum DSM 43021] Length = 494 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 18/172 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGIIKN 219 + I G NAGKS+ L +T A + D F TL P + EG + F LAD G +++ Sbjct: 272 VAIAGYTNAGKSSLLNRLTGAGVLVEDSLFATLDPTVRRAHTPEG-RLFTLADTVGFVRH 330 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 HQ L+ ++LH+V + ++ + E+ A R EIV + Sbjct: 331 LPHQLVEAFRSTLEEVGDADLILHVVDGSHPDPESQLAAV-REVVADIEGARDIPEIVVI 389 Query: 279 SQIDTVDSDTL----ARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ D D L AR+K+ + S+ TG GI ++L + ++ Sbjct: 390 NKADVADPVVLAQLTAREKHTVV---------VSARTGAGIDELLAIIEREL 432 >gi|81428488|ref|YP_395488.1| putative GTP-binding protein [Lactobacillus sakei subsp. sakei 23K] gi|78610130|emb|CAI55179.1| Putative GTP-binding protein [Lactobacillus sakei subsp. sakei 23K] Length = 300 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 9/164 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTF+ + K I T + GI + + + D PGI K Sbjct: 10 VAIVGRPNVGKSTFMNRMIGEKIAIMSSKAQTTRNKIQGIYTDDNAQIVFVDTPGIHKPH 69 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 ++ D+ L +L ++S +++ Q I+D+L ++K + +V ++ Sbjct: 70 NELDEYMDQAALSTFNEVDAILFMISGVDKK-GPGDQYIMDQL----KNVKKPVYLV-VN 123 Query: 280 QIDTVDSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECL 322 +ID + D L + + + + S++ G+ +P++L+ L Sbjct: 124 KIDAIHPDDLLPMIEQYRHELDFKAVYPISALEGNNVPEMLKEL 167 >gi|332522900|ref|ZP_08399152.1| ferrous iron transport protein B [Streptococcus porcinus str. Jelinkova 176] gi|332314164|gb|EGJ27149.1| ferrous iron transport protein B [Streptococcus porcinus str. Jelinkova 176] Length = 721 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 22/184 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + +I +IG PN+GK++ +TR K + ++P T+ GI K +K + D+PGI Sbjct: 1 MTEIALIGNPNSGKTSLFNLLTRTKQHVGNWPGVTVERKSGIAK-NHKNIKVEDLPGIYS 59 Query: 219 N---AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKI 273 + + D L + +L+++ A LE N+ Q I L Sbjct: 60 MSPYSPEEKVARDYLLSY--HADAILNVIDATNLERNLYLTTQLIETGLPV--------- 108 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL----ECLHDKIFSI 329 + L+ D + S ++LA Q G S++ GI Q + + DKI I Sbjct: 109 -TIALNMSDVLKSQGKMINSDKLAYQMGVPVVVTSALKNKGIDQAIKKASQTTKDKIDRI 167 Query: 330 RGEN 333 + N Sbjct: 168 QFPN 171 >gi|320161098|ref|YP_004174322.1| GTP-binding protein [Anaerolinea thermophila UNI-1] gi|319994951|dbj|BAJ63722.1| GTP-binding protein [Anaerolinea thermophila UNI-1] Length = 451 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 13/174 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + ++G NAGKST L + A+ +AD F TL P V+ G + D G I Sbjct: 218 IPVVALVGYTNAGKSTLLNRLANAEVYVADQLFATLDPTTRRVELPGGHLALFTDTVGFI 277 Query: 218 -KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENV--QA-AYQCILDELSAYNSELRKKI 273 K Q L+ +LLH+V N QA A L E+ A + + Sbjct: 278 QKLPTQLVAAFRATLEEIAEADLLLHVVDITHPNAFEQAQAVHATLKEIQADHIPV---- 333 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 I L++ID + A + +A G V S++ G GI ++L ++ ++F Sbjct: 334 -ITLLNKIDRLPDPKAA--EEAIAYFSGSV-LAISALKGMGINEMLTLVNQELF 383 >gi|302766117|ref|XP_002966479.1| hypothetical protein SELMODRAFT_64762 [Selaginella moellendorffii] gi|300165899|gb|EFJ32506.1| hypothetical protein SELMODRAFT_64762 [Selaginella moellendorffii] Length = 310 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 33/194 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGI---- 216 +GIIG PNAGKS+ L + K ++ TT LG++ E + + D PG+ Sbjct: 28 VGIIGAPNAGKSSLLNFMVGTKVSAVSRKTNTTRNEILGVLTENDTQVLFYDTPGLMMRW 87 Query: 217 --------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 +K+ Q A + H E VL+ +E Q + I ++L Sbjct: 88 KGQAVRRDVKSRVQSAWM---VTGHCEVLIVLVDAHRQIERPDQRVRKLI-EKLGEKKDP 143 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNE---LATQCGQVP-----FEFSSITGHGIPQILE 320 +K+ I+ L+++D L R+K E LA + G +P F S + G G+ + E Sbjct: 144 KQKR--ILCLNKVD------LIRQKRELVPLAQEFGSLPGYDRVFMISGLRGSGVRHLKE 195 Query: 321 CLHDKIFSIRGENE 334 L +K E E Sbjct: 196 YLLEKAVPRPWEEE 209 >gi|258514915|ref|YP_003191137.1| ferrous iron transport protein B [Desulfotomaculum acetoxidans DSM 771] gi|257778620|gb|ACV62514.1| ferrous iron transport protein B [Desulfotomaculum acetoxidans DSM 771] Length = 631 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 54/105 (51%), Gaps = 7/105 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + +I + G PN GKST ++T A+ I ++P T+ +G + G K+ + D+PG Sbjct: 3 VLNIALAGNPNTGKSTIFNALTGARQHIGNWPGVTVDKKMGQLTRGKKKINIIDLPG--T 60 Query: 219 NAHQGAGIGDRFLKHT---ERTHVLLHIVSA--LEENVQAAYQCI 258 + + ++ +K E+ +++++V A +E N+ Q + Sbjct: 61 YSLSAYSLEEKIVKEYLLGEKPDLVVNVVDASNIERNLYLTVQLL 105 >gi|189502490|ref|YP_001958207.1| GTP-binding protein Era [Candidatus Amoebophilus asiaticus 5a2] gi|226741166|sp|B3ETC6|ERA_AMOA5 RecName: Full=GTPase Era gi|189497931|gb|ACE06478.1| hypothetical protein Aasi_1141 [Candidatus Amoebophilus asiaticus 5a2] Length = 296 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 2/102 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + I TT + GIV + + I D PGI+K A Sbjct: 11 VTIIGKPNVGKSTLMNRLVGERLSIITPKAQTTRHSICGIVSDTDFQIIFTDTPGILKPA 70 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQAAYQCILDE 261 ++ L+H T VLL +V E+ V + +L + Sbjct: 71 YELQESMMHMLQHALVDTDVLLWLVDIKEKEVPPIVEKVLAQ 112 >gi|78046933|ref|YP_363108.1| GTP-binding protein Era [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123585559|sp|Q3BVV5|ERA_XANC5 RecName: Full=GTPase Era gi|78035363|emb|CAJ23008.1| GTP-binding protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 300 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + +IG PN GKST ++ AK I ++ P TT + LGI + +L D PG+ Sbjct: 13 VAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATFPEGQLVLVDTPGL 68 >gi|289207923|ref|YP_003459989.1| ribosome-associated GTPase EngA [Thioalkalivibrio sp. K90mix] gi|288943554|gb|ADC71253.1| ribosome-associated GTPase EngA [Thioalkalivibrio sp. K90mix] Length = 484 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 16/139 (11%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I I ++G PN GKST +TR++ +AD T GI K G +++ D G+ Sbjct: 1 MIPVIALVGRPNVGKSTLFNQLTRSRDALVADVAGLTRDRQYGIGKVGDFPYLVVDTGGL 60 Query: 217 IKNAHQGAGIGDRFLKHTERT-----HVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 + +GA + + T+R HVL +V A + + Q I D+L + + R Sbjct: 61 ---SGEGAEMDRAMAEQTQRAVAEADHVLF-LVDA-RDGLTPQDQAIADQLRSAGVKAR- 114 Query: 272 KIEIVGLSQIDTVDSDTLA 290 V +++ D +D+D ++ Sbjct: 115 ----VVVNKTDGLDADAVS 129 >gi|215408359|emb|CAS02407.1| putative integron gene cassette protein [uncultured bacterium] Length = 203 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 30/54 (55%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 +G+IG PN GK+T ++T + K+ ++P T+ +G G L D+PG Sbjct: 6 VGLIGNPNCGKTTLFNALTGMRQKVGNWPGVTVDRKIGSFDVGADRVELVDLPG 59 >gi|148988412|ref|ZP_01819859.1| GTP-binding protein Era [Streptococcus pneumoniae SP6-BS73] gi|147926093|gb|EDK77167.1| GTP-binding protein Era [Streptococcus pneumoniae SP6-BS73] Length = 245 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEARGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLSQIDDFRNQMDFKEIVP--ISALQGNNVSRLVDILSENL 169 >gi|148981906|ref|ZP_01816564.1| GTP-binding protein Era [Vibrionales bacterium SWAT-3] gi|145960707|gb|EDK26049.1| GTP-binding protein Era [Vibrionales bacterium SWAT-3] Length = 323 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +G+ EG + I D PG+ Sbjct: 32 IAIVGRPNVGKSTLLNHILGQKISITSRKPQTTRHRIMGVETEGDYQAIFVDTPGL 87 >gi|134046010|ref|YP_001097496.1| ferrous iron transport protein B [Methanococcus maripaludis C5] gi|132663635|gb|ABO35281.1| ferrous iron transport protein B [Methanococcus maripaludis C5] Length = 647 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 32/55 (58%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + ++G PN GK+T +T K +I ++P T+ G K+ + +++ D+PGI Sbjct: 7 VALLGQPNVGKTTLFNHLTGMKQRIGNWPGVTVEKKEGFFKKNNENYVVVDLPGI 61 >gi|307610240|emb|CBW99801.1| hypothetical protein LPW_15641 [Legionella pneumophila 130b] Length = 462 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I I ++G PN GKST +T+ + +AD+P T G + K FI+ D GI Sbjct: 1 MIPVIALVGRPNVGKSTLFNRITKTQDALVADFPGLTRDRQYGHAQHENKSFIIVDTGGI 60 >gi|304373109|ref|YP_003856318.1| GTP-binding protein era-like protein [Mycoplasma hyorhinis HUB-1] gi|304309300|gb|ADM21780.1| GTP-binding protein era-like protein [Mycoplasma hyorhinis HUB-1] gi|330723266|gb|AEC45636.1| GTPase Era [Mycoplasma hyorhinis MCLD] Length = 292 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 20/143 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIGLPN+GKST L ++ I Y P TT GI E + + D PG Sbjct: 6 VSIIGLPNSGKSTMLNTILDYDLSIVSYKPQTTRDQINGIYSEDDFQIVFVDTPGFQSEN 65 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY-QCILDELSAYNSELRKKI-----E 274 + + ++ + +S+LE+ A + + +L + EL KK+ + Sbjct: 66 SLFSKVLNK------------NAISSLEDIDLALFLHPVNRKLDQTSIELAKKVLKLKNK 113 Query: 275 IVGLSQIDT-VDSDTLARKKNEL 296 I L++ID D+ LA+K NEL Sbjct: 114 IAILTKIDLEEDNQILAQKANEL 136 >gi|304392069|ref|ZP_07374011.1| GTP-binding protein Era [Ahrensia sp. R2A130] gi|303296298|gb|EFL90656.1| GTP-binding protein Era [Ahrensia sp. R2A130] Length = 314 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 17/172 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST + + K I + TT GI + I AD PGI + Sbjct: 25 VALIGAPNAGKSTLINRLVGTKVSIVSHKVQTTRTVVRGIANRDNSQIIFADTPGIFQPR 84 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + + D + ++ ++ + E ++ + ILD+L N L K ++ ++ Sbjct: 85 RRLDRAMVDAAWGGAKDADMICLLIDS-ERGIRGDAERILDKLK--NVHLPK---VLLMN 138 Query: 280 QIDTVDSDTLARKKNELATQCGQV-----PFEFSSITGHGIPQILECLHDKI 326 +ID V D L L Q + F S++ G G ++ L D++ Sbjct: 139 KIDRVQRDKLL----ALVDQANKAVNFDRTFLISAMNGDGCEDYMDYLKDEL 186 >gi|303246793|ref|ZP_07333070.1| GTP-binding protein Era [Desulfovibrio fructosovorans JJ] gi|302491810|gb|EFL51690.1| GTP-binding protein Era [Desulfovibrio fructosovorans JJ] Length = 305 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 24/177 (13%) Query: 164 IIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 ++G NAGKST L V K I + P TT GI+ EG + + D PG+ + Q Sbjct: 12 MLGPTNAGKSTLLNRVIGQKVSIVSPKPQTTRNSISGILTEGDAQAVFLDTPGLHR---Q 68 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE-------- 274 GI L+ +V L + + A A ++LR ++ Sbjct: 69 KRGIAPLLLRSAYAALGQADVVLVLLDGARYARDP-----DALRADLRPVVQALTNAKTP 123 Query: 275 -IVGLSQIDTVDSDTLARKKNELATQCGQVP----FEFSSITGHGIPQILECLHDKI 326 +V L++ D V AR LA +P F S++TG G+ ++L L ++ Sbjct: 124 VVVALNKSDAVRDK--ARMLPVLAAIGEALPGAELFPVSALTGQGVAELLTALFARL 178 >gi|302342246|ref|YP_003806775.1| ribosome-associated GTPase EngA [Desulfarculus baarsii DSM 2075] gi|301638859|gb|ADK84181.1| ribosome-associated GTPase EngA [Desulfarculus baarsii DSM 2075] Length = 479 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 20/179 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK--IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 + +IG PN GKS+ L ++ P+ ++D P TT ++ G K++++ D GI + Sbjct: 211 VALIGRPNVGKSSLLNALF-GGPRVVVSDVPGTTRDAVDTPIQVGDKKYVIIDTAGIRRR 269 Query: 220 AHQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 GI R L+ +R HV++ ++ A E V ++ N L I Sbjct: 270 GKVAPGIEKAGVFRSLRAIDRAHVVVAMMEA-GEGVTDQDLHLIGAAMEQNRAL-----I 323 Query: 276 VGLSQIDTVDSDTLARKK--NELATQCGQVPF----EFSSITGHGIPQILECLHDKIFS 328 V +++ D + D RK+ L P+ S + G G+ +IL L D+IF+ Sbjct: 324 VVMNKWDLLAGDERRRKQLDARLEEALRFAPWAPVLRLSVLKGRGVDKILP-LVDQIFA 381 >gi|208434439|ref|YP_002266105.1| GTP-binding protein era-like protein [Helicobacter pylori G27] gi|226741218|sp|B5Z6P0|ERA_HELPG RecName: Full=GTPase Era gi|208432368|gb|ACI27239.1| GTP-binding protein era-like protein [Helicobacter pylori G27] Length = 301 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 25/173 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYK-EFILADIPG 215 + +IG PNAGKST L ++ A + + + + KEGY+ + I D PG Sbjct: 8 VALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPG 67 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS--ELRKKI 273 + HQ + L L + E V A + D+L Y L +K Sbjct: 68 L---HHQEKLLNQCMLSQA------LKAMGDAELCVFLA--SVHDDLKGYEEFLNLCQKP 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECL 322 I+ LS+IDT + +K E Q VP S+ + +LEC+ Sbjct: 117 HILALSKIDTATHKQVLQKLQEYQKYSSQFLDLVP--LSAKKSQNLNTLLECI 167 >gi|58581479|ref|YP_200495.1| GTP-binding protein Era [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623409|ref|YP_450781.1| GTP-binding protein Era [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|81311900|sp|Q5H1R1|ERA_XANOR RecName: Full=GTPase Era gi|123522358|sp|Q2P4M0|ERA_XANOM RecName: Full=GTPase Era gi|58426073|gb|AAW75110.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367349|dbj|BAE68507.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 299 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + +IG PN GKST ++ AK I ++ P TT + LGI + +L D PG+ Sbjct: 13 VAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATFPEGQLVLVDTPGL 68 >gi|315053401|ref|XP_003176074.1| GTP-binding protein [Arthroderma gypseum CBS 118893] gi|311337920|gb|EFQ97122.1| GTP-binding protein [Arthroderma gypseum CBS 118893] Length = 484 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 196 PNLGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 PN G EG + L D+ G++ AH+G G+G++FL L+H+V Sbjct: 115 PNYGGCHEGRRSVPIELLDVAGLVPGAHEGKGLGNKFLDDLRHADALIHVV 165 >gi|227498680|ref|ZP_03928824.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226904136|gb|EEH90054.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 717 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G + G+ E ++ D+PGI + Sbjct: 5 IALAGNPNTGKTTLFNALTGSNQFVGNWPGVTVEKKEGTLI-GHPEILIQDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ER +L+IV S LE N+ Q + EL + ++ + Sbjct: 64 YTLEEVVSRTYLVKERPDAILNIVDGSNLERNLYLTTQLM---------ELGIPV-LMAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D ++ LA G E S+ TG GI +++ Sbjct: 114 NMMDVTRANGDILYTEVLAKSIGCPVVEISARTGEGIKTLVQ 155 >gi|195124754|ref|XP_002006852.1| GI18366 [Drosophila mojavensis] gi|193911920|gb|EDW10787.1| GI18366 [Drosophila mojavensis] Length = 379 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 36/198 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I +IG+PN GKSTF+ ++ K + TT N I+ G + + D PG++ Sbjct: 68 IAVIGVPNVGKSTFINNIINHKVCPTSGKVHTTRKANTAILTTGQTQLVFYDTPGLVTQH 127 Query: 221 HQGAGIGDRFLKHTERTHVLLH--IVSALEE-----NVQAAYQCILDELSAY-------- 265 ++ K R H + H I++ +++ ++ + ++D L Y Sbjct: 128 EIRKHHLEQSFKSAYR-HAIQHADIIAVMQDASNSWTRKSLHPTVIDTLKTYAQLPSLLV 186 Query: 266 -NSELRKKIEIVGLSQIDTVDSDTL----ARKKNELATQCGQVP--------------FE 306 N K + V L I T+ +DTL A KK L ++ V F Sbjct: 187 LNKVDALKSKRVLLDLIKTLTNDTLRSKSAIKKISLPSESVGVRLNQRETSWNHFSDVFL 246 Query: 307 FSSITGHGIPQILECLHD 324 SSITG G+ ++ + L D Sbjct: 247 VSSITGSGLQELQDYLVD 264 >gi|315604445|ref|ZP_07879511.1| GTP-binding protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315314151|gb|EFU62202.1| GTP-binding protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 515 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 8/170 (4%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I G NAGKST L +T A + D F TL P + + +E+ L D G + Sbjct: 283 VPSVAIAGYTNAGKSTLLNRLTDAGVLVQDALFATLDPTVRRARAADGREYTLTDTVGFV 342 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +N Q L+ + +++H+V A + + Q + + R E++ Sbjct: 343 RNLPTQLVEAFRSTLEEVGQADLIVHVVDAAHPDPVSQVQAVRSVIDTIEGA-RDIPELI 401 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L++ D + +A + S+ TG G+ + + D + Sbjct: 402 ALNKADLASPEQIALLRTVFPGAVA-----LSARTGWGVDALRAAVEDML 446 >gi|310815099|ref|YP_003963063.1| GTP-binding protein Era [Ketogulonicigenium vulgare Y25] gi|308753834|gb|ADO41763.1| GTP-binding protein Era [Ketogulonicigenium vulgare Y25] Length = 307 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIK 218 + +IG PNAGKST L + AK I + T + G+ EG + + D PG+ + Sbjct: 13 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAIEGDAQIVFVDTPGLFR 70 >gi|317051926|ref|YP_004113042.1| ferrous iron transport protein B [Desulfurispirillum indicum S5] gi|316947010|gb|ADU66486.1| ferrous iron transport protein B [Desulfurispirillum indicum S5] Length = 718 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 15/162 (9%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNA 220 + G PNAGKST ++T A+ +A+YP T+ G++ + D+PG + Sbjct: 8 ALAGNPNAGKSTLFNTITGARQHVANYPGVTVDTLEGVIDFQKNTLRIVDLPGTYSLSAY 67 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 Q + RFL ++ +L+++ A LE ++ Q + EL + ++ L Sbjct: 68 SQEELVARRFLVR-QKPDAVLNVLDAGSLERHLYLTVQFL---------ELGVPV-VLAL 116 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D V ++ L++ G + TG G Q+L+ Sbjct: 117 NMMDEVRKRGISIDIERLSSLLGMPVVATVARTGEGKDQLLQ 158 >gi|262282704|ref|ZP_06060472.1| GTP-binding protein [Streptococcus sp. 2_1_36FAA] gi|262261995|gb|EEY80693.1| GTP-binding protein [Streptococcus sp. 2_1_36FAA] Length = 299 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVEAAYSTLREVDTVLFMVPA-DEPRGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + +++ L + + Sbjct: 119 VVNKIDKVHPDQLLAQIDDFRQQMDFKEIVP--ISALQGNNVSHLVDILSENL 169 >gi|261855985|ref|YP_003263268.1| GTP-binding protein Era [Halothiobacillus neapolitanus c2] gi|261836454|gb|ACX96221.1| GTP-binding protein Era [Halothiobacillus neapolitanus c2] Length = 308 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKS+ L + K I A P TT + GI+ E + + D PGI Sbjct: 19 VAIVGRPNVGKSSLLNRLVGQKISITAPKPQTTRHRITGILSEPRGQVVFVDTPGI---- 74 Query: 221 HQGAGIG-DRFLKHTERT 237 HQG +R L T R+ Sbjct: 75 HQGGSDALNRQLNRTARS 92 >gi|54297453|ref|YP_123822.1| GTP-binding protein EngA [Legionella pneumophila str. Paris] gi|148359075|ref|YP_001250282.1| GTP-binding protein EngA [Legionella pneumophila str. Corby] gi|296107123|ref|YP_003618823.1| GTP-binding protein EngA [Legionella pneumophila 2300/99 Alcoy] gi|81822576|sp|Q5X522|DER_LEGPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166225822|sp|A5IC36|DER_LEGPC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|53751238|emb|CAH12649.1| hypothetical protein lpp1498 [Legionella pneumophila str. Paris] gi|148280848|gb|ABQ54936.1| GTP-binding protein EngA [Legionella pneumophila str. Corby] gi|295649024|gb|ADG24871.1| GTP-binding protein EngA [Legionella pneumophila 2300/99 Alcoy] Length = 462 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I I ++G PN GKST +T+ + +AD+P T G + K FI+ D GI Sbjct: 1 MIPVIALVGRPNVGKSTLFNRITKTQDALVADFPGLTRDRQYGHAQHENKSFIIVDTGGI 60 >gi|87311874|ref|ZP_01093986.1| GTP-binding protein Hflx [Blastopirellula marina DSM 3645] gi|87285405|gb|EAQ77327.1| GTP-binding protein Hflx [Blastopirellula marina DSM 3645] Length = 442 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 27/145 (18%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL--------YPNLGIVKEGYKEFIL 210 + I I+G NAGKST + +T A+ D F TL P+ G V +L Sbjct: 200 VMTISIVGYTNAGKSTLMNYLTEAQVLAEDKLFATLDTRTRRWQLPHWGPV-------LL 252 Query: 211 ADIPGIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENV----QAAYQCILDELSAY 265 +D G I+N H+ L+ + +LLH+ A +V A Y+ +L+E+ Sbjct: 253 SDTVGFIRNLPHRLIASFKATLEEARQADLLLHVADASNADVVNQISAVYE-VLEEIG-- 309 Query: 266 NSELRKKIEIVGLSQIDTV-DSDTL 289 + +K ++ L++ID V D TL Sbjct: 310 ---IEEKDALLVLNKIDAVTDQHTL 331 >gi|330466447|ref|YP_004404190.1| gtp-binding proten hflx [Verrucosispora maris AB-18-032] gi|328809418|gb|AEB43590.1| gtp-binding proten hflx [Verrucosispora maris AB-18-032] Length = 480 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 6/136 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGIIKN 219 + I G NAGKS+ L +T A + D F TL P EG + + L+D G +++ Sbjct: 255 VAIAGYTNAGKSSLLNRLTGAGVLVEDALFATLDPTTRRATTSEG-RVYTLSDTVGFVRH 313 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 HQ L+ +++H+V + Q + + + L+ ++ + E++ + Sbjct: 314 LPHQIVEAFRSTLEEIAEADLVVHVVDGTHPDPQEQVRAVREVLTEVGAD--RLPELLVV 371 Query: 279 SQIDTVDSDTLARKKN 294 ++ D D +TL + K Sbjct: 372 NKTDAADEETLLQLKR 387 >gi|218781247|ref|YP_002432565.1| GTP-binding protein Era [Desulfatibacillum alkenivorans AK-01] gi|218762631|gb|ACL05097.1| GTP-binding protein Era [Desulfatibacillum alkenivorans AK-01] Length = 297 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 13/62 (20%) Query: 162 IGIIGLPNAGKSTFL-------ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIP 214 IG+IG PN GKST L S+T +KP+ TT LG+V + ++ D P Sbjct: 10 IGMIGAPNVGKSTLLNQMLGEKVSITSSKPQ------TTRNRILGVVHREKAQLVMLDTP 63 Query: 215 GI 216 GI Sbjct: 64 GI 65 >gi|163753670|ref|ZP_02160793.1| GTP-binding protein HflX [Kordia algicida OT-1] gi|161325884|gb|EDP97210.1| GTP-binding protein HflX [Kordia algicida OT-1] Length = 413 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 18/145 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G N GKST + +++++ + F TL + V G F+L+D G I+ Sbjct: 212 VALVGYTNVGKSTLMNVISKSEVFAENKLFATLDTTVRKVVIGNLPFLLSDTVGFIRKL- 270 Query: 222 QGAGIGDRF---LKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKIEI 275 + D F L +LLH+V N + A+ IL E+ + + K + Sbjct: 271 -PTQLVDSFKSTLDEVREADLLLHVVDISHPNFEDHIASVNQILSEIKSGD-----KPTV 324 Query: 276 VGLSQID-----TVDSDTLARKKNE 295 + ++ID T+DSD L +K + Sbjct: 325 MVFNKIDAYTHETIDSDDLVTEKTK 349 >gi|16330625|ref|NP_441353.1| GTP-binding protein HflX [Synechocystis sp. PCC 6803] gi|1653117|dbj|BAA18033.1| GTP-binding protein; HflX [Synechocystis sp. PCC 6803] Length = 534 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 19/144 (13%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN------LGIVKEGYKEFILAD 212 + + I+G NAGKST L ++T+A AD F TL P L + Y +L D Sbjct: 361 VPTVAIVGYTNAGKSTLLNALTQADIYAADQLFATLDPTTRRLSLLDPENQTYHPILLTD 420 Query: 213 IPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYN 266 G I + D F L+ +LL +V + + A+ IL E+ Sbjct: 421 TVGFIHKLPD--ALVDAFRATLEEVTEADLLLQVVDLSDRAWRRQIASVANILAEMPLAT 478 Query: 267 SELRKKIEIVGLSQIDTVDSDTLA 290 + + ++ ++ID V S+ LA Sbjct: 479 APM-----VMVFNKIDQVPSEALA 497 >gi|153821706|ref|ZP_01974373.1| ferrous iron transport protein B [Vibrio cholerae B33] gi|229511930|ref|ZP_04401409.1| ferrous iron transport protein B [Vibrio cholerae B33] gi|229607379|ref|YP_002878027.1| ferrous iron transport protein B [Vibrio cholerae MJ-1236] gi|254849164|ref|ZP_05238514.1| ferrous iron transport protein B [Vibrio cholerae MO10] gi|255745179|ref|ZP_05419128.1| ferrous iron transport protein B [Vibrio cholera CIRS 101] gi|126520804|gb|EAZ78027.1| ferrous iron transport protein B [Vibrio cholerae B33] gi|229351895|gb|EEO16836.1| ferrous iron transport protein B [Vibrio cholerae B33] gi|229370034|gb|ACQ60457.1| ferrous iron transport protein B [Vibrio cholerae MJ-1236] gi|254844869|gb|EET23283.1| ferrous iron transport protein B [Vibrio cholerae MO10] gi|255737009|gb|EET92405.1| ferrous iron transport protein B [Vibrio cholera CIRS 101] Length = 758 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 17/166 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G EF L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYALDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH V++++V A LE ++ Q ELR+ + IV Sbjct: 68 SNSIDESIASRAVLTHPADVIINVVDATCLERSLYMTLQL---------RELRRPM-IVV 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 L+++D + + + +L G S+ + + E LH Sbjct: 118 LNKMDALKRERVHLDLKQLEAFLGCPVLALSANNKEQVRRFKEKLH 163 >gi|325694805|gb|EGD36710.1| GTP-binding protein Era [Streptococcus sanguinis SK150] Length = 299 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVEAAYSTLREVDTVLFMVPA-DEPRGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + +++ L + + Sbjct: 119 VVNKIDKVHPDQLLAQIDDFRQQMDFKEIVP--ISALQGNNVSHLVDILSENL 169 >gi|299143528|ref|ZP_07036608.1| Fe2+ transport system protein B [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518013|gb|EFI41752.1| Fe2+ transport system protein B [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 688 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 31/54 (57%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 IG++G PN GKST ++T A+ + ++P T+ G K K + L D+PG Sbjct: 15 IGLLGQPNTGKSTLFNALTGARQHVGNWPGKTVEKKEGSFKYKGKAYTLLDLPG 68 >gi|294631824|ref|ZP_06710384.1| GTP-binding protein HflX [Streptomyces sp. e14] gi|292835157|gb|EFF93506.1| GTP-binding protein HflX [Streptomyces sp. e14] Length = 496 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 15/169 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I G NAGKS+ L +T A + + F TL P + + + + LAD G + Sbjct: 273 VPSVAIAGYTNAGKSSLLNRLTGAGVLVENALFATLDPTVRRAETPSGRLYTLADTVGFV 332 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKI 273 ++ H ++ + ++LH+V N + AA + ++ ++ A + Sbjct: 333 RHLPHHLVEAFRSTMEEVGDSDLILHVVDGSHPNPEEQLAAVREVIRDVGATDVP----- 387 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 EIV +++ D D L R + + S+ TG GIP++L + Sbjct: 388 EIVVVNKADAADPLVLQR-----LLRVEKHSIAVSARTGRGIPELLALI 431 >gi|226466676|emb|CAX69473.1| Nucleolar G-protein 1 [Schistosoma japonicum] Length = 585 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + G PN GKS+F+ +TRA + +PFTT +G + + D PG++ Sbjct: 173 LCGFPNVGKSSFINKITRADVDVQPFPFTTKSLFVGHTDYKNLRWQVIDTPGVL 226 >gi|307153147|ref|YP_003888531.1| small GTP-binding protein [Cyanothece sp. PCC 7822] gi|306983375|gb|ADN15256.1| small GTP-binding protein [Cyanothece sp. PCC 7822] Length = 208 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 5/91 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG--- 215 I I ++G+PN GKS ++T +++YP TT+ + G ++ + D PG Sbjct: 39 IPQIALVGMPNVGKSVLFNALTGTYATVSNYPGTTVEVSRGQTVIDDRQVNVIDTPGMYS 98 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 ++ + D LK ER ++ +H++ A Sbjct: 99 LVPITEEERVARDLLLK--ERVNLAIHVLDA 127 >gi|254362978|ref|ZP_04979042.1| possible GTP-binding protein [Mannheimia haemolytica PHL213] gi|153094634|gb|EDN75438.1| possible GTP-binding protein [Mannheimia haemolytica PHL213] Length = 511 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 13/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHANIAGYDFIVIDTGG-IDGT 63 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A + A D A R+K +V Sbjct: 64 EEGVEEKMAEQSLLAIEEADVVLFLVDARAGLLPA------DVGIAQYLRQREKTTVVVA 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G+V + ++ G G+ Q++E Sbjct: 118 NKTDGIDADSHCAEFYQLG--LGEVE-QIAAAQGRGVTQLIE 156 >gi|145579207|pdb|2DYK|A Chain A, Crystal Structure Of N-Terminal Gtp-Binding Domain Of Enga From Thermus Thermophilus Hb8 gi|145579208|pdb|2DYK|B Chain B, Crystal Structure Of N-Terminal Gtp-Binding Domain Of Enga From Thermus Thermophilus Hb8 Length = 161 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 1/97 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKS+ + + + + AD P T G+V+ F+L D G+ Sbjct: 4 VVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETDRGRFLLVDTGGLWSGD 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 I ++ + E V+L V E QA Y+ Sbjct: 64 KWEKKIQEKVDRALEDAEVVLFAVDGRAELTQADYEV 100 >gi|187478827|ref|YP_786851.1| GTP-binding protein [Bordetella avium 197N] gi|115423413|emb|CAJ49947.1| GTP-binding protein [Bordetella avium 197N] Length = 368 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G NAGKST ++TRA AD F TL EG +L+D G I+ Sbjct: 192 VSLVGYTNAGKSTLFNALTRAGAYAADQLFATLDTTTRRFWIEGAGSVVLSDTVGFIREL 251 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSA 246 R L+ T +LLH+V A Sbjct: 252 PPNLIAAFRATLEETVHADLLLHVVDA 278 >gi|52841771|ref|YP_095570.1| GTP-binding protein EngA [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81823403|sp|Q5ZV99|DER_LEGPH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|52628882|gb|AAU27623.1| GTP-binding protein EngA [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 462 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I I ++G PN GKST +T+ + +AD+P T G + K FI+ D GI Sbjct: 1 MIPVIALVGRPNVGKSTLFNRITKTQDALVADFPGLTRDRQYGHAQHENKSFIIVDTGGI 60 >gi|313679731|ref|YP_004057470.1| GTP-binding protein hflx [Oceanithermus profundus DSM 14977] gi|313152446|gb|ADR36297.1| GTP-binding protein HflX [Oceanithermus profundus DSM 14977] Length = 554 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 17/171 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP--NLGIVKEGYKEFILADIPGIIKN 219 + I+G NAGK+T L ++TR + F TL P G + GY E + D G I++ Sbjct: 378 VAIVGYTNAGKTTLLRALTRKGDAGENKLFATLRPLTRRGYLP-GYGEVLFTDTVGFIRD 436 Query: 220 AHQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 R L+ ++LH+V A + ++ + D L E + + + + Sbjct: 437 MPPALVTAFRATLEELFEADLVLHVVDATADGALEHHRVVEDRLVEMGLEAPRLVVVNKI 496 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 + D D L + + +A S++ G G LE L +I + Sbjct: 497 DRADPFDRMRLEEQLDGVAV---------SALEGRG----LEDLASRIVRV 534 >gi|307946584|ref|ZP_07661919.1| GTP-binding protein Era [Roseibium sp. TrichSKD4] gi|307770248|gb|EFO29474.1| GTP-binding protein Era [Roseibium sp. TrichSKD4] Length = 313 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 31/173 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST L + K I + T + GI + I D PGI K Sbjct: 24 VALIGAPNAGKSTLLNQLVGTKVSIVTHKVQTTRAIVRGIAMHEASQLIFVDTPGIFKPK 83 Query: 221 HQGAGIGDRFLKHT--------ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 + DR + T + T +L+ ++E V + I+ LS + Sbjct: 84 RR----LDRAMVDTAWSGARDADLTALLIDARKGIDEEV----EDIMSRLSDLPGD---- 131 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQV-PFE----FSSITGHGIPQILE 320 +++ L++ID D L +LA + ++ PF+ S++ G G+ IL+ Sbjct: 132 -KVLILNKIDVTQRDQLL----QLAQKAHEILPFKETFMVSALNGDGVASILD 179 >gi|290967934|ref|ZP_06559484.1| ferrous iron transport protein B [Megasphaera genomosp. type_1 str. 28L] gi|290782073|gb|EFD94651.1| ferrous iron transport protein B [Megasphaera genomosp. type_1 str. 28L] Length = 727 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 18/159 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 + + G PN GK+T ++T + + ++P T+ ++ K+ I+ D+PGI + Sbjct: 5 VALAGNPNTGKTTLFNALTGSVQHVGNWPGVTVEKKEARLRYN-KDVIVEDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + I R +R V+L+IV A LE N+ Q + E+ + ++ L Sbjct: 64 YTTEEIVARTYIINDRPDVILNIVDASNLERNLYLTTQLV---------EVGVPV-LLAL 113 Query: 279 SQIDTV--DSDTLARKKNELATQCGQVPFEFSSITGHGI 315 + +D V + DT+ KK L + G F S++ G GI Sbjct: 114 NMMDVVKRNGDTIDMKK--LGDELGCEVFPISALKGEGI 150 >gi|262304233|gb|ACY44709.1| GTP-binding protein [Eurytemora affinis] Length = 280 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + + H+ E+ +V+ + D L Sbjct: 35 VTDIAGLVKGASEGQGLGNAFLSHIKACDAMFHLCRTFEDPEITHVEGEVDPVRD-LDII 93 Query: 266 NSELRKKIEIVGLSQIDTVDS 286 N ELR K E L D ++ Sbjct: 94 NEELRLKDEDQFLKVYDDIEK 114 >gi|253988871|ref|YP_003040227.1| GTP-binding protein EngA [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780321|emb|CAQ83482.1| gtp-binding protein enga (double era-like domain protein) [Photorhabdus asymbiotica] Length = 499 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 19/170 (11%) Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPG 215 ++I + ++G PN GKST +TR + +AD+P T G + +EFI+ D G Sbjct: 5 QMIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGQEFIIIDTGG 64 Query: 216 IIKN-----AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR 270 I H A + L E ++L +V A + A I L + R Sbjct: 65 IDGTEDGVETHMAA----QSLMAIEEADIVLFMVDA-RAGLMPADHAIAKHLRS-----R 114 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 +K + ++ D +D DT + L G + + ++ G G+ Q++E Sbjct: 115 EKATFLVANKTDGIDIDTSIAEFYSLG--LGDI-YSIAASHGRGVTQLIE 161 >gi|223985698|ref|ZP_03635745.1| hypothetical protein HOLDEFILI_03051 [Holdemania filiformis DSM 12042] gi|223962309|gb|EEF66774.1| hypothetical protein HOLDEFILI_03051 [Holdemania filiformis DSM 12042] Length = 298 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST L ++ + K I+ P TT I + + I D PGI K Sbjct: 6 VALIGRPNAGKSTLLNALVQQKVAIISPKPQTTRNSIRAIRTDADSQIIFVDTPGIHKPK 65 Query: 221 HQ 222 H+ Sbjct: 66 HE 67 >gi|238480011|ref|NP_001154669.1| GTP binding [Arabidopsis thaliana] gi|218551791|sp|Q0WTB4|Y3725_ARATH RecName: Full=GTP-binding protein At3g49725, chloroplastic; Flags: Precursor gi|332645061|gb|AEE78582.1| GTP-binding protein, HflX [Arabidopsis thaliana] Length = 620 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 14/121 (11%) Query: 147 GQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK 206 G++K + L+ + I ++G NAGKST ++++T+ + F TL P L Sbjct: 333 GRKKRVGLEGESSGTIAVVGYTNAGKSTLISALTKTALYCNERLFATLDPTLKSAHLPSG 392 Query: 207 EFIL--------ADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCI 258 F+L +D+P + A Q L+ +LLH+V + N++ + Sbjct: 393 NFVLLSDTVGFISDLPIQLVKAFQST------LEEVVEADLLLHVVDSTAPNIEEHRSTV 446 Query: 259 L 259 L Sbjct: 447 L 447 >gi|328950083|ref|YP_004367418.1| GTP-binding protein Era-like-protein [Marinithermus hydrothermalis DSM 14884] gi|328450407|gb|AEB11308.1| GTP-binding protein Era-like-protein [Marinithermus hydrothermalis DSM 14884] Length = 299 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L ++ K I P TT GI EG ++ + D PG+ K A Sbjct: 11 VAIVGKPNVGKSTLLNTMLGVKVAPITPKPQTTRKTVRGIYTEGNRQIVFVDTPGLHKPA 70 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIV 244 G I ++ + +++L +V Sbjct: 71 DALGEYINEQVYEALADVNLILWLV 95 >gi|302037772|ref|YP_003798094.1| putative GTPase HflX, GTP-binding protein [Candidatus Nitrospira defluvii] gi|300605836|emb|CBK42169.1| putative GTPase HflX, GTP-binding protein [Candidatus Nitrospira defluvii] Length = 538 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 2/118 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNA 220 + I+G NAGKST L S+T ++ D F TL ++ + +E I+ D G I++ Sbjct: 354 LSIVGYTNAGKSTLLNSLTHSQIPAQDRLFETLDTTSRRLRFPHDREVIVTDTVGFIRDL 413 Query: 221 HQG-AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + G L +LLH+V A NV + L + N + ++ ++ Sbjct: 414 PKDLVGAFRTTLDELRDADLLLHVVDASAPNVDQQITAVETVLQSLNLDTIPRVMVLN 471 >gi|163867993|ref|YP_001609197.1| GTP-binding protein Era [Bartonella tribocorum CIP 105476] gi|161017644|emb|CAK01202.1| GTP-binding protein Era [Bartonella tribocorum CIP 105476] Length = 303 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 33/180 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGI---- 216 + +IG+PNAGKST + + K I + T + GIV + +L D PG+ Sbjct: 14 VVLIGMPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLIRGIVIHDDVQIVLVDTPGVFRPH 73 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 + A GA D L VL+ S L + V +LD ++ E Sbjct: 74 KRLERAMVSAAWGGAKSADVLL-------VLIDAQSGLSDEVDR----MLDIVNTMKQE- 121 Query: 270 RKKIEIVGLSQIDTVDSDT---LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ L+++DTV + L K NE + Q F S++ G G +L L + + Sbjct: 122 ----KVLVLNKVDTVVKSSLLALTTKINE-RVKFAQT-FMISALNGSGCKDLLHALSNMM 175 >gi|146283357|ref|YP_001173510.1| GTP-binding protein EngA [Pseudomonas stutzeri A1501] gi|166225844|sp|A4VNW7|DER_PSEU5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|145571562|gb|ABP80668.1| GTP-binding protein EngA [Pseudomonas stutzeri A1501] gi|327481749|gb|AEA85059.1| GTP-binding protein EngA [Pseudomonas stutzeri DSM 4166] Length = 499 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 11/165 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +T+++ I A+Y T G K + +I+ D GI Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEAKWQGRTYIVIDTGGI 60 Query: 217 IKNAHQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + A + ++ L+ E +L +V + + AA Q I + L N K+ + Sbjct: 61 SGDEEGIDAKMAEQSLQAIEEADAVLFMVDS-RAGLTAADQMIGEHLRKRN----KRCFL 115 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V +++D+VD D +AR + +P ++ G GI +LE Sbjct: 116 VA-NKVDSVDPD-IARAEFSPLGLGDALP--IAAAHGRGISHMLE 156 >gi|54294416|ref|YP_126831.1| GTP-binding protein EngA [Legionella pneumophila str. Lens] gi|81822385|sp|Q5WWG8|DER_LEGPL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|53754248|emb|CAH15725.1| hypothetical protein lpl1485 [Legionella pneumophila str. Lens] Length = 462 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I I ++G PN GKST +T+ + +AD+P T G + K FI+ D GI Sbjct: 1 MIPVIALVGRPNVGKSTLFNRITKTQDALVADFPGLTRDRQYGHAQHENKSFIIVDTGGI 60 >gi|15827260|ref|NP_301523.1| GTP-binding protein Era [Mycobacterium leprae TN] gi|221229738|ref|YP_002503154.1| GTP-binding protein Era [Mycobacterium leprae Br4923] gi|466988|gb|AAA17174.1| B1937_F3_102 [Mycobacterium leprae] gi|13092809|emb|CAC30139.1| putative Era-family GTP-binding protein [Mycobacterium leprae] gi|219932845|emb|CAR70724.1| putative Era-family GTP-binding protein [Mycobacterium leprae Br4923] Length = 302 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 11/167 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIV-KEGYKEFILADIPGIIK- 218 + +IG PN GKST ++ K I P TT + GIV +EG + +L D PG+ + Sbjct: 11 VCLIGRPNTGKSTLTNALVGTKVAITSMKPQTTRHTIRGIVHREGNFQIVLVDTPGLHRP 70 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 G + D ++ T L+ + +E + I++++ + K I +V + Sbjct: 71 RTLLGKRLND-LVRDTYTEVDLIGLCIPADEATGPGDRWIVNQIRSVAP---KTILVVIV 126 Query: 279 SQIDTVDSDTLARK---KNELATQCGQVPFEFSSITGHGIPQILECL 322 ++ID V D L+ + ++L ++ S++TG + +++ L Sbjct: 127 TKIDKVPKDRLSAQLVAVSDLVADSAEI-VPVSAVTGEQVDVLIDVL 172 >gi|21242079|ref|NP_641661.1| GTP-binding protein Era [Xanthomonas axonopodis pv. citri str. 306] gi|294626962|ref|ZP_06705553.1| GTP-binding protein Era [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664536|ref|ZP_06729881.1| GTP-binding protein Era [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|25008431|sp|Q8PMU9|ERA_XANAC RecName: Full=GTPase Era gi|21107486|gb|AAM36197.1| GTP-binding protein [Xanthomonas axonopodis pv. citri str. 306] gi|292598822|gb|EFF42968.1| GTP-binding protein Era [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605698|gb|EFF49004.1| GTP-binding protein Era [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 299 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + +IG PN GKST ++ AK I ++ P TT + LGI + +L D PG+ Sbjct: 13 VAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATFPEGQLVLVDTPGL 68 >gi|223933277|ref|ZP_03625267.1| GTP-binding proten HflX [Streptococcus suis 89/1591] gi|302024050|ref|ZP_07249261.1| GTPase [Streptococcus suis 05HAS68] gi|330832491|ref|YP_004401316.1| GTP-binding proten HflX [Streptococcus suis ST3] gi|223898091|gb|EEF64462.1| GTP-binding proten HflX [Streptococcus suis 89/1591] gi|329306714|gb|AEB81130.1| GTP-binding proten HflX [Streptococcus suis ST3] Length = 416 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 2/103 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKN- 219 IG+IG NAGKST + +T + AD F TL + K L D G I++ Sbjct: 201 IGLIGYTNAGKSTIMNVMTDKRQYEADELFATLDATTKQINLADKFNVTLTDTVGFIQDL 260 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 + L+ + +LLHI+ A + N Q +LD L Sbjct: 261 PTELISAFKSTLEESMNVDLLLHIIDASDPNHSEQEQVVLDIL 303 >gi|307243739|ref|ZP_07525879.1| GTP-binding protein HflX [Peptostreptococcus stomatis DSM 17678] gi|306492948|gb|EFM64961.1| GTP-binding protein HflX [Peptostreptococcus stomatis DSM 17678] Length = 437 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 18/149 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK--------IADYPFTTLYPNL-GIVKEGYKEFILAD 212 + ++G NAGKST L + + P + D F TL L + KEF++ D Sbjct: 214 VALVGYTNAGKSTLLNEIIKTHPDYEKDKEVFVKDMLFATLDVTLRKALLPNKKEFLVVD 273 Query: 213 IPGII-KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENV---QAAYQCILDELSAYNSE 268 G + K H L+ ++LHI+ A + ++ + +L +L A + Sbjct: 274 TVGFVSKLPHDLVDAFKATLEEVTYADLILHIIDATNTSSDIQKSTTESVLKDLKADD-- 331 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNELA 297 K I ++ID +D D R + ++ Sbjct: 332 ---KYTITVYNKIDKLDLDIYPRNQEDMV 357 >gi|291549625|emb|CBL25887.1| ferrous iron transporter FeoB [Ruminococcus torques L2-14] Length = 679 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 30/54 (55%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 IG IG PN GK+T + T A K+A++P T+ G +K+ L D+PG Sbjct: 7 IGFIGNPNCGKTTLFNAYTGANLKVANWPGVTVEKVEGAIKDHDLNIRLVDLPG 60 >gi|242278632|ref|YP_002990761.1| GTP-binding proten HflX [Desulfovibrio salexigens DSM 2638] gi|242121526|gb|ACS79222.1| GTP-binding proten HflX [Desulfovibrio salexigens DSM 2638] Length = 531 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 6/105 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + ++G NAGKST L ++T + D F TL P ++ +E IL D G I+ Sbjct: 365 VSLVGYTNAGKSTLLNTLTNSGVLAEDKLFATLDPTSRRIRFPREQELILTDTVGFIRQL 424 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSA----LEENVQAAYQCILD 260 + R L+ E VLLH+ + ++E + A + D Sbjct: 425 PKELKEAFRATLEELEAADVLLHVCDSSHPEVDEQIAAVNNIVAD 469 >gi|167755646|ref|ZP_02427773.1| hypothetical protein CLORAM_01161 [Clostridium ramosum DSM 1402] gi|237734394|ref|ZP_04564875.1| GTP-binding protein [Mollicutes bacterium D7] gi|167704585|gb|EDS19164.1| hypothetical protein CLORAM_01161 [Clostridium ramosum DSM 1402] gi|229382624|gb|EEO32715.1| GTP-binding protein [Coprobacillus sp. D7] Length = 296 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 19/154 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L S+ K I +D TT GI + + I D PGI Sbjct: 7 VSIVGRPNVGKSTLLNSILETKLAIMSDVAQTTRNTIQGIHTDDEAQIIFMDTPGI---- 62 Query: 221 HQGAGIGDRFLKHTERTHV----LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ F+ T + L+ ++ E + + I++ L + + + Sbjct: 63 HKPQDRLGTFMNTTALNSIFGVDLVLFLAPANEKIGRGDKFIIERLKEADGPV-----FL 117 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSI 310 LS+IDTV + L +K E Q F+F I Sbjct: 118 VLSKIDTVSKEELIKKLQE-----WQELFDFKEI 146 >gi|27363631|ref|NP_759159.1| ferrous iron transport protein B [Vibrio vulnificus CMCP6] gi|27359747|gb|AAO08686.1| ferrous iron transport protein B [Vibrio vulnificus CMCP6] Length = 758 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 17/172 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I +G PN+GK+T +T AK ++ ++ T+ G EF+L D+PGI + + Sbjct: 5 ILTVGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGRYHHAGDEFLLTDLPGIYSLDS 64 Query: 220 AHQGAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + I + TH +++++V A LE ++ Q L EL + Sbjct: 65 GNDSNSIDESIASRAVLTHPADMIINVVDATSLERSLYMTLQ--LRELG--------RPM 114 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 IV L+++D + + EL G S+ + + E LH + Sbjct: 115 IVVLNKMDALKRERQIINVAELEKSLGCPVISLSATNKAQVAEFKEKLHKSV 166 >gi|317177645|dbj|BAJ55434.1| GTP-binding protein Era [Helicobacter pylori F16] Length = 301 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 25/173 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYK-EFILADIPG 215 + +IG PNAGKST L ++ A+ + + + + KEGY+ + I D PG Sbjct: 8 VALIGKPNAGKSTLLNTLLNARLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPG 67 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS--ELRKKI 273 + HQ ++ L + L + A + + D+L Y L +K Sbjct: 68 L---HHQ-----EKLLNQCMLSQALKAMGDA---KLCVFLASVHDDLKGYEEFLSLCQKP 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECL 322 I+ +S+IDT + +K E Q VP S+ + +LEC+ Sbjct: 117 HILAVSKIDTATHKQVLQKLQEYQQYASQFLALVP--LSAKKSQNLNALLECI 167 >gi|302380500|ref|ZP_07268965.1| GTP-binding protein Era [Finegoldia magna ACS-171-V-Col3] gi|302311443|gb|EFK93459.1| GTP-binding protein Era [Finegoldia magna ACS-171-V-Col3] Length = 294 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 23/175 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG N GKST L V K I+D P TT I + + I D PGI Sbjct: 7 VSVIGRSNVGKSTLLNRVLGEKLTIISDKPQTTRNKIQLIYTDENMQAIFLDTPGIQTPK 66 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ +GD LK + T V+ +IV EE + I+++L N+++ I+ Sbjct: 67 NK---LGDYMLKVSMSTLNEVDVITYIVDTTEE-IGKLDSEIIEKLRLVNTKI-----IL 117 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQV-PFE----FSSITGHGIPQILECLHDKI 326 +++ID + SD K NEL +V FE S++ G I L L + + Sbjct: 118 LINKIDKIASD----KVNELVEMYTKVGIFEQIIPISALNGDNIEGYLTSLRNTL 168 >gi|262191350|ref|ZP_06049541.1| ferrous iron transport protein B [Vibrio cholerae CT 5369-93] gi|262032769|gb|EEY51316.1| ferrous iron transport protein B [Vibrio cholerae CT 5369-93] Length = 758 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 17/166 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G EF L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYALDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH V++++V A LE ++ Q ELR+ + IV Sbjct: 68 SNSIDESIASRAVLTHPADVIINVVDATCLERSLYMTLQL---------RELRRPM-IVV 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 L+++D + + + +L G S+ + + E LH Sbjct: 118 LNKMDALKRERVHLDLKQLEAFLGCPVLALSANNKEQVRRFKEKLH 163 >gi|99034460|ref|ZP_01314456.1| hypothetical protein Wendoof_01000738 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 405 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 5/91 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI-LADIPGIIKNA 220 I IIG PN GKSTFL + I T ++ I + E I L D GI + A Sbjct: 178 IAIIGRPNVGKSTFLNGLLAENRLITSSEPGTTRDSVDITYDHDGELITLIDTAGIRRKA 237 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSAL 247 + G+ RF++ + +R+HV++ ++ +L Sbjct: 238 NVVDGLESRFVEKSMESIKRSHVVVLMLDSL 268 >gi|291532770|emb|CBL05883.1| ferrous iron transporter FeoB [Megamonas hypermegale ART12/1] Length = 664 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 32/55 (58%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + IG PN GK+T + T A K+A++P T+ G+++ + + L D+PGI Sbjct: 7 VAFIGNPNCGKTTLFNAYTGAHLKVANWPGVTVEKKEGVMQFHNENYKLVDLPGI 61 >gi|153826080|ref|ZP_01978747.1| ferrous iron transport protein B [Vibrio cholerae MZO-2] gi|149740197|gb|EDM54350.1| ferrous iron transport protein B [Vibrio cholerae MZO-2] Length = 758 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 17/166 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G EF L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYALDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH V++++V A LE ++ Q ELR+ + IV Sbjct: 68 SNSIDESIASRAVLTHPADVIINVVDATCLERSLYMTLQL---------RELRRPM-IVV 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 L+++D + + + +L G S+ + + E LH Sbjct: 118 LNKMDALKRERVHLDLKQLEAFLGCPVLALSANNKEQVRRFKEKLH 163 >gi|113868332|ref|YP_726821.1| GTPase [Ralstonia eutropha H16] gi|113527108|emb|CAJ93453.1| Predicted GTPase [Ralstonia eutropha H16] Length = 420 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKN- 219 I ++G NAGKST ++T+A AD F TL + + +G +L+D G I++ Sbjct: 204 ISLVGYTNAGKSTLFNALTKAGAYAADQLFATLDTTSRRLFLDGLGNVVLSDTVGFIRDL 263 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA 246 Q L T +LLH+V A Sbjct: 264 PTQLVAAFRATLDETVHADLLLHVVDA 290 >gi|91977123|ref|YP_569782.1| GTP-binding protein Era [Rhodopseudomonas palustris BisB5] gi|91683579|gb|ABE39881.1| GTP-binding protein Era [Rhodopseudomonas palustris BisB5] Length = 307 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 19/106 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGI---- 216 + +IG PN GKST + ++ +K I T + GIV EG + +L D PGI Sbjct: 17 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGGSQIVLVDTPGIFAPK 76 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY 255 +K A GA D VLL S L+E + + Sbjct: 77 RRLDRAMVKTAWTGAHDADLVC-------VLLDARSGLDEEAETIF 115 >gi|15642077|ref|NP_231709.1| ferrous iron transport protein B [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586907|ref|ZP_01676687.1| ferrous iron transport protein B [Vibrio cholerae 2740-80] gi|121727403|ref|ZP_01680542.1| ferrous iron transport protein B [Vibrio cholerae V52] gi|147673265|ref|YP_001217603.1| ferrous iron transport protein B [Vibrio cholerae O395] gi|153818394|ref|ZP_01971061.1| ferrous iron transport protein B [Vibrio cholerae NCTC 8457] gi|227082203|ref|YP_002810754.1| ferrous iron transport protein B [Vibrio cholerae M66-2] gi|229507834|ref|ZP_04397339.1| ferrous iron transport protein B [Vibrio cholerae BX 330286] gi|229519066|ref|ZP_04408509.1| ferrous iron transport protein B [Vibrio cholerae RC9] gi|262155963|ref|ZP_06029084.1| ferrous iron transport protein B [Vibrio cholerae INDRE 91/1] gi|262167697|ref|ZP_06035400.1| ferrous iron transport protein B [Vibrio cholerae RC27] gi|298497896|ref|ZP_07007703.1| ferrous iron transporter B [Vibrio cholerae MAK 757] gi|9656624|gb|AAF95223.1| ferrous iron transport protein B [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548843|gb|EAX58886.1| ferrous iron transport protein B [Vibrio cholerae 2740-80] gi|121630295|gb|EAX62693.1| ferrous iron transport protein B [Vibrio cholerae V52] gi|126511084|gb|EAZ73678.1| ferrous iron transport protein B [Vibrio cholerae NCTC 8457] gi|146315148|gb|ABQ19687.1| ferrous iron transport protein B [Vibrio cholerae O395] gi|227010091|gb|ACP06303.1| ferrous iron transport protein B [Vibrio cholerae M66-2] gi|227013974|gb|ACP10184.1| ferrous iron transport protein B [Vibrio cholerae O395] gi|229343755|gb|EEO08730.1| ferrous iron transport protein B [Vibrio cholerae RC9] gi|229355339|gb|EEO20260.1| ferrous iron transport protein B [Vibrio cholerae BX 330286] gi|262023902|gb|EEY42600.1| ferrous iron transport protein B [Vibrio cholerae RC27] gi|262030274|gb|EEY48917.1| ferrous iron transport protein B [Vibrio cholerae INDRE 91/1] gi|297542229|gb|EFH78279.1| ferrous iron transporter B [Vibrio cholerae MAK 757] Length = 758 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 17/166 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G EF L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYALDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH V++++V A LE ++ Q ELR+ + IV Sbjct: 68 SNSIDESIASRAVLTHPADVIINVVDATCLERSLYMTLQL---------RELRRPM-IVV 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 L+++D + + + +L G S+ + + E LH Sbjct: 118 LNKMDALKRERVHLDLKQLEAFLGCPVLALSANNKEQVRRFKEKLH 163 >gi|332702984|ref|ZP_08423072.1| GTP-binding proten HflX [Desulfovibrio africanus str. Walvis Bay] gi|332553133|gb|EGJ50177.1| GTP-binding proten HflX [Desulfovibrio africanus str. Walvis Bay] Length = 552 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 24/135 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILAD-------I 213 + ++G NAGKST L ++T + D F TL P ++ +E +L D + Sbjct: 379 VALVGYTNAGKSTLLNTLTGSVVLAEDKLFATLDPTSRRIRFPREREVVLTDTVGFIRQL 438 Query: 214 PGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSEL 269 P ++ A Q L+ E +L+H+ A LE V AA + IL E+ EL Sbjct: 439 PDELREAFQAT------LEELESADLLVHVADAGSPELESQV-AAVEFILGEM-----EL 486 Query: 270 RKKIEIVGLSQIDTV 284 K ++ L++ DT+ Sbjct: 487 GKIARVLVLNKWDTL 501 >gi|238653814|emb|CAV30756.1| Fe2+ transport system protein B [magnetite-containing magnetic vibrio] Length = 728 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 15/165 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G PN GK+T ++T A + +YP T+ ++ L D+PGI Sbjct: 27 VALVGNPNTGKTTLSNALTGAHDSVGNYPRVTVSMRSRTIQHKGWTLNLVDLPGIYSLTS 86 Query: 222 QGA--GIGDRFLKHTERTHVLLHIVS--ALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 Q IG F++ ER ++L+++ L+ ++ Q I E+ + + Sbjct: 87 QSPEERIGRDFIQD-ERPDIVLNVLDGGTLDRSLFLTTQLI---------EMGRP-RVYA 135 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 L+ +D + + EL + E + TG G+ Q+L+ + Sbjct: 136 LNMVDEMHKKGYSIDCEELGSMLDGPVIETVATTGQGMEQLLDAV 180 >gi|229522035|ref|ZP_04411452.1| ferrous iron transport protein B [Vibrio cholerae TM 11079-80] gi|229340960|gb|EEO05965.1| ferrous iron transport protein B [Vibrio cholerae TM 11079-80] Length = 758 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 17/166 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G EF L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYALDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH V++++V A LE ++ Q ELR+ + IV Sbjct: 68 SNSIDESIASRAVLTHPADVIINVVDATCLERSLYMTLQL---------RELRRPM-IVV 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 L+++D + + + +L G S+ + + E LH Sbjct: 118 LNKMDALKRERVHLDLKQLEAFLGCPVLALSANNKEQVRRFKEKLH 163 >gi|254281726|ref|ZP_04956694.1| GTP-binding protein Era [gamma proteobacterium NOR51-B] gi|219677929|gb|EED34278.1| GTP-binding protein Era [gamma proteobacterium NOR51-B] Length = 300 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I P TT LGI +G + I D PGI + Sbjct: 12 VAIVGRPNVGKSTLLNYLLGQKISITSRKPQTTRNQVLGIKTDGNTQIIFVDTPGIHSSE 71 Query: 221 HQGAGIGDRFLKHT 234 + +RF+ T Sbjct: 72 PRAI---NRFMNRT 82 >gi|242278975|ref|YP_002991104.1| ferrous iron transport protein B [Desulfovibrio salexigens DSM 2638] gi|242121869|gb|ACS79565.1| ferrous iron transport protein B [Desulfovibrio salexigens DSM 2638] Length = 709 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 21/166 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI-- 216 I I I G+PN+GK+T ++T A+ K+ ++P T+ G + L D+PG Sbjct: 4 IERIAIAGVPNSGKTTLFNALTGARQKVGNWPGVTVEKIEGTFSLSGTKVELVDLPGTYN 63 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQC---------ILDELSAY 265 + + + +R ++ E +++++V A L N+ +L+ L Sbjct: 64 LSPDTEDQKVAERVIRSGEY-DMIVNVVDATNLSRNLFLTMDLKERTDQIVILLNMLDVA 122 Query: 266 NSE-----LRKKIEIVGLSQIDT--VDSDTLARKKNELATQCGQVP 304 SE +RK + +G++ I VD D++ R LA + ++P Sbjct: 123 ESEGLDIDVRKLSKELGIAVIPVIAVDKDSVERAVAALAVEAQKLP 168 >gi|210610917|ref|ZP_03288642.1| hypothetical protein CLONEX_00832 [Clostridium nexile DSM 1787] gi|210152217|gb|EEA83224.1| hypothetical protein CLONEX_00832 [Clostridium nexile DSM 1787] Length = 776 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 76/161 (47%), Gaps = 16/161 (9%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 ++G N GK+T +T AK + ++P T+ G++K G+ ++ D+PGI + Sbjct: 118 ALVGNQNCGKTTLFNQLTGAKQHVGNFPGVTVDRKDGVIK-GHDNTLITDLPGIYSMSPY 176 Query: 223 GAG--IGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + F+ H E+ +++IV A +E N+ Q + EL + +V L Sbjct: 177 SSEEIVTREFVIH-EKPKGIINIVDATNIERNLYLTMQLL---------ELGIPM-VVAL 225 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 + +D + + + NE+ + G S+ G GI +++ Sbjct: 226 NMMDELRENDGSVLVNEMEEELGVPVIPISAAKGEGIEELI 266 >gi|145351972|ref|XP_001420333.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580567|gb|ABO98626.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 555 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 24/177 (13%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGY--KEFILADIPGI-- 216 + IIG PN GKS+ L + A+ ++D+ TT +V++ Y ++F L D GI Sbjct: 285 VAIIGRPNVGKSSLLNGLAGEARSIVSDFSGTTRDSIDTLVEDKYTGRKFTLIDTAGIRR 344 Query: 217 ---IKNAHQGA---GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR 270 +K+ GA +G R L+ +R V++ ++ E Q + +L E + Sbjct: 345 RTQVKSGTDGAEKLSVG-RALQAMKRADVVVLVIDGTEGPSQQDF--VLAERATQEG--- 398 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF------SSITGHGIPQILEC 321 ++ +++ D VD DT K + FE+ S++TG I +IL+ Sbjct: 399 -CAIVLCINKWDLVDKDTHTMNKYTDDMRLKLRVFEYAEIVYTSALTGQRIQKILDA 454 >gi|189345893|ref|YP_001942422.1| GTP-binding protein Era [Chlorobium limicola DSM 245] gi|189340040|gb|ACD89443.1| GTP-binding protein Era [Chlorobium limicola DSM 245] Length = 305 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 10/165 (6%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 I G PNAGKST L + K I P TT GI + ++ I D PGI++ + Sbjct: 13 IAGQPNAGKSTLLNKLLDYKLSIVTPKPQTTRKKITGIYHDNRRQIIFLDTPGIMQPQQK 72 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD-ELSAYNSELRK--KIEIVGLS 279 + + L T RT +V+AL + + LD +N+ L+ K I L+ Sbjct: 73 ---LHESMLAITRRTLEEADVVTALIPYTKGSEPYDLDFTAELFNAWLKPAGKPVIAVLN 129 Query: 280 QIDTVDSDTLARKKNELATQ--CGQVPFEFSSITGHGIPQILECL 322 + D V S + K + TQ S++ G G+ +++E L Sbjct: 130 KSDIV-SRAVQEKAESVMTQLFSPAAVISVSALEGTGLEKLVEAL 173 >gi|328957635|ref|YP_004375021.1| putative GTP-binding protein protease modulator [Carnobacterium sp. 17-4] gi|328673959|gb|AEB30005.1| putative GTP-binding protein protease modulator [Carnobacterium sp. 17-4] Length = 423 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 2/100 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP-NLGIVKEGYKEFILADIPGIIKN- 219 IG++G NAGKST L +T+A + F TL P ++ L D G I++ Sbjct: 209 IGLMGYTNAGKSTLLNKLTQADTYEENQLFATLDPLTRQLLLPSGMTVTLTDTVGFIQDL 268 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL 259 Q L+ T+ +LLH+V A EN+ Q ++ Sbjct: 269 PTQLIESFKSTLEETKGVDLLLHVVDASAENMAGHEQTVV 308 >gi|302551316|ref|ZP_07303658.1| GTP-binding protein Era [Streptomyces viridochromogenes DSM 40736] gi|302468934|gb|EFL32027.1| GTP-binding protein Era [Streptomyces viridochromogenes DSM 40736] Length = 320 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 11/150 (7%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I A+ P TT + GIV + IL D PG+ K Sbjct: 27 VGRPNAGKSTLTNALVGQKVAITANQPQTTRHTVRGIVHRPDAQLILVDTPGLHKPR--- 83 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ E + + I EL++ ++K +I +++ Sbjct: 84 TLLGERLNDVVRTTWAEVDVIGFCLPANEKLGPGDRFIAKELAS----IKKTPKIAIVTK 139 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEFSSI 310 D VD LA + + ++ FE++ I Sbjct: 140 TDLVDGKMLAEQLIAIDQLGKELGFEWAEI 169 >gi|240850198|ref|YP_002971591.1| GTP-binding protein Era [Bartonella grahamii as4aup] gi|240267321|gb|ACS50909.1| GTP-binding protein Era [Bartonella grahamii as4aup] Length = 301 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 33/180 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGI---- 216 + +IG+PNAGKST + + K I + T + GIV + +L D PG+ Sbjct: 12 VVLIGMPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLIRGIVIHDDVQIVLVDTPGVFRPH 71 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 + A GA D L VL+ S L + V +LD ++ E Sbjct: 72 KRLERAMVSAAWGGAKSADVLL-------VLIDAQSGLSDEV----DMMLDIVNNMKQE- 119 Query: 270 RKKIEIVGLSQIDTVDSDT---LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ L+++DTV + L K NE + Q F S++ G G +L L + + Sbjct: 120 ----KVLVLNKVDTVVKSSLLALTTKINE-RVKFAQT-FMISALNGSGCKDLLHALSNMM 173 >gi|298490731|ref|YP_003720908.1| GTP-binding protein Era ['Nostoc azollae' 0708] gi|298232649|gb|ADI63785.1| GTP-binding protein Era ['Nostoc azollae' 0708] Length = 318 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 16/168 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 IGIIG PN GKST + + K I T L GI+ + I D PGI + Sbjct: 29 IGIIGRPNVGKSTLMNQLVGQKIAITSPIAQTTRNRLRGILTTDKAQLIFVDTPGIHQPH 88 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 HQ +G+ +K+ E V+L +V + I + LS + + I+ Sbjct: 89 HQ---LGEVLVKNAKIAIESVDVVLFVVDG-TAACGGGDRFITELLSRSQTAV-----IL 139 Query: 277 GLSQID--TVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 G+++ID D++ L +LA + +FS+ T G+ + E L Sbjct: 140 GINKIDEQPADAEKLDDSYIQLAKEHQWETIKFSAKTALGLVEAQELL 187 >gi|254524023|ref|ZP_05136078.1| GTP-binding protein Era [Stenotrophomonas sp. SKA14] gi|219721614|gb|EED40139.1| GTP-binding protein Era [Stenotrophomonas sp. SKA14] Length = 287 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + +IG PN GKST ++ AK I ++ P TT + LGI + +L D PG+ K Sbjct: 1 MAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATYPEGQLVLVDTPGLHK 58 >gi|190149696|ref|YP_001968221.1| GTP-binding protein EngA [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263004|ref|ZP_07544626.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238692380|sp|B3H0R7|DER_ACTP7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|189914827|gb|ACE61079.1| GTP-binding protein EngA [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306871630|gb|EFN03352.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 506 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 17/174 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHANIAGYDFIVIDTGG-IDGT 63 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A V A D A R+K +V Sbjct: 64 EEGVEEKMAEQSLLAIEEADVVLFLVDARAGLVPA------DIGIAQYLRQREKTTVVVA 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 ++ D +D+D+ + +L G+V + ++ G G+ Q++ D++ + GE Sbjct: 118 NKTDGIDADSHCAEFYQLG--LGEVE-QIAAAQGRGVTQLI----DQVLAPLGE 164 >gi|218441386|ref|YP_002379715.1| GTP-binding protein Era [Cyanothece sp. PCC 7424] gi|218174114|gb|ACK72847.1| GTP-binding protein Era [Cyanothece sp. PCC 7424] Length = 318 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 73/163 (44%), Gaps = 20/163 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + K I T L GI+ + I D PGI K Sbjct: 28 VAIIGRPNVGKSTLMNQLVGQKIAITSPVAQTTRNRLQGILTTSEAQIIFVDTPGIHKPH 87 Query: 221 HQGAGIGDRFLKHTERT-----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 H+ +G +K+ + VLL S++E Y I+D L E K I Sbjct: 88 HE---LGKVLVKNAQMAINAVDLVLLVADSSIEAGGGDRY--IIDLL-----EETKTPVI 137 Query: 276 VGLSQID--TVDSDTLARKKNELATQCGQVPF-EFSSITGHGI 315 +GL++ D + D L +LA Q Q P +FS++TG G+ Sbjct: 138 LGLNKSDQQPANFDPLDESYRQLA-QFHQWPMVKFSALTGSGL 179 >gi|118399315|ref|XP_001031983.1| small GTP-binding protein domain containing protein [Tetrahymena thermophila] gi|89286319|gb|EAR84320.1| small GTP-binding protein domain containing protein [Tetrahymena thermophila SB210] Length = 439 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 12/166 (7%) Query: 161 DIGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVK--EGYKEFILADIPGII 217 D+ ++G PNAGKS+ + + +++ +++ TT LG+ E + + D PGI Sbjct: 89 DVALLGPPNAGKSSLMNYIVKSQISAVSNKANTTYESILGVHTNLEKQTQILFYDTPGIT 148 Query: 218 KNAHQGAGIGDR---FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI- 273 K R L + ++ V L++ ++ A + L+ L YN + KKI Sbjct: 149 KQYKYSKAYVTRAWDILNDVNKAIFMIDGVKTLDDKIREALKR-LNSL-KYNEKANKKID 206 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 +I L+Q D V + L K+ L+T + S P++L Sbjct: 207 QITQLNQDDPVYKEKL---KHILSTDHNKADITDESYGSSSFPKVL 249 >gi|323703320|ref|ZP_08114970.1| GTP-binding protein Era [Desulfotomaculum nigrificans DSM 574] gi|323531683|gb|EGB21572.1| GTP-binding protein Era [Desulfotomaculum nigrificans DSM 574] Length = 302 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST L + K I +D P TT + ++ + + D PGI K Sbjct: 13 VALVGRPNVGKSTLLNKLVGQKVAIMSDKPQTTRHKIHSVLSRNDAQIVFLDTPGIHKPR 72 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSA 246 H+ G + D L + V+L +V A Sbjct: 73 HKLGEYMVDVALGALKEVDVVLFLVEA 99 >gi|319936541|ref|ZP_08010955.1| ferrous iron transporter B [Coprobacillus sp. 29_1] gi|319808339|gb|EFW04899.1| ferrous iron transporter B [Coprobacillus sp. 29_1] Length = 709 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 14/161 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 + + G PN+GK+T ++T A + ++P T+ G K G KE + D+PGI + Sbjct: 5 VALAGNPNSGKTTLFNALTGANQFVGNWPGVTVEKKEGKYK-GDKEIKITDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ V+L+IV S LE N+ Q + EL + +V + Sbjct: 64 YTLEEVVSREYLLNEKVDVILNIVDGSNLERNLYLTTQLL---------ELGIPV-VVAI 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 + +D ++ +L+ + G S++ GI +++ Sbjct: 114 NMLDVIEKRGDKVNYVQLSKELGCPVMPISALKNKGIDEVM 154 >gi|304413541|ref|ZP_07395014.1| GTP-binding protein [Candidatus Regiella insecticola LSR1] gi|304284384|gb|EFL92777.1| GTP-binding protein [Candidatus Regiella insecticola LSR1] Length = 310 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L ++ K I P TT + +GI EG + I D PG+ Sbjct: 12 VAIVGRPNVGKSTLLNALLGQKVSITSRKPQTTRHRIMGIHTEGAYQTIYIDTPGL 67 >gi|229513733|ref|ZP_04403195.1| ferrous iron transport protein B [Vibrio cholerae TMA 21] gi|229348914|gb|EEO13871.1| ferrous iron transport protein B [Vibrio cholerae TMA 21] Length = 758 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 17/166 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G EF L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYALDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH V++++V A LE ++ Q ELR+ + IV Sbjct: 68 SNSIDESIASRAVLTHPADVIINVVDATCLERSLYMTLQL---------RELRRPM-IVV 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 L+++D + + + +L G S+ + + E LH Sbjct: 118 LNKMDALKRERVHLDLKQLEAFLGCPVLALSANNKEQVRRFKEKLH 163 >gi|308048450|ref|YP_003912016.1| GTP-binding protein Era [Ferrimonas balearica DSM 9799] gi|307630640|gb|ADN74942.1| GTP-binding protein Era [Ferrimonas balearica DSM 9799] Length = 302 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 VAIVGRPNVGKSTLLNRLLGQKVSITSRKPQTTRHRIMGIHTEGAYQTIFVDTPGL 66 >gi|169824433|ref|YP_001692044.1| GTP-binding protein [Finegoldia magna ATCC 29328] gi|167831238|dbj|BAG08154.1| GTP-binding protein [Finegoldia magna ATCC 29328] Length = 294 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 23/175 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG N GKST L V K I+D P TT I + + I D PGI Sbjct: 7 VSVIGRSNVGKSTLLNRVLGEKLTIISDKPQTTRNKIQLIYTDENMQAIFLDTPGIQTPK 66 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ +GD LK + T V+ +IV EE + I+++L N+++ I+ Sbjct: 67 NK---LGDYMLKVSMSTLNEVDVITYIVDTTEE-IGKLDSEIIEKLRLVNTKI-----IL 117 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQV-PFE----FSSITGHGIPQILECLHDKI 326 +++ID + SD K NEL +V FE S++ G I L L + + Sbjct: 118 LINKIDKIASD----KVNELVEMYTKVGIFEQIIPISALNGDNIEGYLTSLRNTL 168 >gi|126663305|ref|ZP_01734303.1| putative GTP-binding protein [Flavobacteria bacterium BAL38] gi|126624963|gb|EAZ95653.1| putative GTP-binding protein [Flavobacteria bacterium BAL38] Length = 294 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 11/131 (8%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + A V I TT + LGIV + + +D PGIIK A Sbjct: 8 VNIIGNPNVGKSTLMNAFVGERLSIITSKAQTTRHRILGIVNGDDFQVLFSDTPGIIKPA 67 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI-VGL 278 ++ F+K E +L+++V E+ ++ DE + +N + KI + + L Sbjct: 68 YELQNSMMDFVKSAFEDADILVYMVEIGEKELK-------DE-AFFNKIIHSKIPVLLLL 119 Query: 279 SQIDTVDSDTL 289 ++ID + + L Sbjct: 120 NKIDKSNQEQL 130 >gi|319794354|ref|YP_004155994.1| ribosome-associated GTPase enga [Variovorax paradoxus EPS] gi|315596817|gb|ADU37883.1| ribosome-associated GTPase EngA [Variovorax paradoxus EPS] Length = 447 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 8/106 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +T+ + I ADY T + G + G EFI+ D G +A Sbjct: 5 VALVGRPNVGKSTLFNRLTQTRDAIVADYAGLTRDRHYGNGRLGKHEFIVIDTGGFEPDA 64 Query: 221 HQGAGIGDRFLKHTER----THVLLHIVSALEENVQAAYQCILDEL 262 G+GI K T + V++ +V A E + A I +EL Sbjct: 65 --GSGIYKEMAKQTRQAVAEADVVIFVVDA-REGLSAQDHDIANEL 107 >gi|297579582|ref|ZP_06941510.1| ferrous iron transporter B [Vibrio cholerae RC385] gi|297537176|gb|EFH76009.1| ferrous iron transporter B [Vibrio cholerae RC385] Length = 758 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 17/166 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G EF L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYALDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH V++++V A LE ++ Q ELR+ + IV Sbjct: 68 SNSIDESIASRAVLTHPADVIINVVDATCLERSLYMTLQL---------RELRRPM-IVV 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 L+++D + + + +L G S+ + + E LH Sbjct: 118 LNKMDALKRERVHLDLKQLEAFLGCPVLALSANNKEQVRRFKEKLH 163 >gi|282856462|ref|ZP_06265739.1| ferrous iron transport protein FeoB [Pyramidobacter piscolens W5455] gi|282585702|gb|EFB90993.1| ferrous iron transport protein FeoB [Pyramidobacter piscolens W5455] Length = 834 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 31/54 (57%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 I + G PN GKST S+T AK +A+YP T+ +G K ++ + D+PG Sbjct: 6 IALAGQPNCGKSTVFNSLTGAKQFVANYPGVTVDKMMGWYKRNGEDVEVIDLPG 59 >gi|197123761|ref|YP_002135712.1| ferrous iron transporter B [Anaeromyxobacter sp. K] gi|196173610|gb|ACG74583.1| ferrous iron transport protein B [Anaeromyxobacter sp. K] Length = 740 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I I G PN+GKST + + ++ ++ ++P T+ + G + L D+PG + Sbjct: 23 IAIAGNPNSGKSTLVNGLAGSRLQVGNWPGVTVERKEASFEHGGRRVRLVDLPGTYSLSP 82 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCI 258 Q + +L ER HV++++V A LE N+ Q + Sbjct: 83 WSQEERVARDYLVE-ERAHVVVNVVDATNLERNLYLTVQLL 122 >gi|58696986|ref|ZP_00372467.1| GTP-binding protein [Wolbachia endosymbiont of Drosophila simulans] gi|58698319|ref|ZP_00373236.1| GTP-binding protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58535192|gb|EAL59274.1| GTP-binding protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58536766|gb|EAL60014.1| GTP-binding protein [Wolbachia endosymbiont of Drosophila simulans] Length = 399 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 5/91 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI-LADIPGIIKNA 220 I IIG PN GKSTFL + I T ++ I + E I L D GI + A Sbjct: 136 IAIIGRPNVGKSTFLNGLLAENRLITSSEPGTTRDSVDITYDHDGELITLIDTAGIRRKA 195 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSAL 247 + G+ RF++ + +R+HV++ ++ +L Sbjct: 196 NVVDGLESRFVEKSMESIKRSHVVVLMLDSL 226 >gi|32034718|ref|ZP_00134849.1| COG1160: Predicted GTPases [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207887|ref|YP_001053112.1| GTP-binding protein EngA [Actinobacillus pleuropneumoniae L20] gi|307260878|ref|ZP_07542564.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|166224300|sp|A3MZC1|DER_ACTP2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|126096679|gb|ABN73507.1| GTP-binding protein EngA [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306869445|gb|EFN01236.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 506 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 17/174 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHANIAGYDFIVIDTGG-IDGT 63 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A V A D A R+K +V Sbjct: 64 EEGVEEKMAEQSLLAIEEADVVLFLVDARAGLVPA------DIGIAQYLRQREKTTVVVA 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 ++ D +D+D+ + +L G+V + ++ G G+ Q++ D++ + GE Sbjct: 118 NKTDGIDADSHCAEFYQLG--LGEVE-QIAAAQGRGVTQLI----DQVLAPLGE 164 >gi|303249765|ref|ZP_07335969.1| GTP-binding protein EngA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251953|ref|ZP_07533854.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256448|ref|ZP_07538230.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|302651332|gb|EFL81484.1| GTP-binding protein EngA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860645|gb|EFM92657.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306865078|gb|EFM96979.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 506 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 17/174 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHANIAGYDFIVIDTGG-IDGT 63 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A V A D A R+K +V Sbjct: 64 EEGVEEKMAEQSLLAIEEADVVLFLVDARAGLVPA------DIGIAQYLRQREKTTVVVA 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 ++ D +D+D+ + +L G+V + ++ G G+ Q++ D++ + GE Sbjct: 118 NKTDGIDADSHCAEFYQLG--LGEVE-QIAAAQGRGVTQLI----DQVLAPLGE 164 >gi|262304287|gb|ACY44736.1| GTP-binding protein [Prokoenenia wheeleri] Length = 280 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + H+ E+ +V+ + D L Sbjct: 35 ITDIAGLVKGASEGQGLGNAFLSHISACDAIFHMSRLFEDENVTHVEGEVNPVXD-LEII 93 Query: 266 NSELRKKIEIVGLSQIDTVDSDTL 289 N ELR K E + ID ++ L Sbjct: 94 NEELRLKDEEMLNKDIDKLERTVL 117 >gi|238924233|ref|YP_002937749.1| GTP-binding protein Era [Eubacterium rectale ATCC 33656] gi|238875908|gb|ACR75615.1| GTP-binding protein Era [Eubacterium rectale ATCC 33656] Length = 303 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 23/138 (16%) Query: 162 IGIIGLPNAGKSTFL-------ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIP 214 + IIG PN GKST + ++T KP+ T+Y ++ ++G + + D P Sbjct: 10 VTIIGRPNVGKSTLMNRLIGQKIAITSNKPQTTRNRIQTVYTDM---EKG--QIVFLDTP 64 Query: 215 GIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRK 271 GI K ++ +G+ + E+T + +V L E A Q I+++L N+ + Sbjct: 65 GIHKAKNK---LGEYMVNVAEKTLNEVDVVLWLVEPTNFIGAGEQHIIEQLKKVNTPV-- 119 Query: 272 KIEIVGLSQIDTVDSDTL 289 I+ ++++DTV+ + + Sbjct: 120 ---ILIINKVDTVEKEKV 134 >gi|254286804|ref|ZP_04961757.1| ferrous iron transport protein B [Vibrio cholerae AM-19226] gi|150423095|gb|EDN15043.1| ferrous iron transport protein B [Vibrio cholerae AM-19226] Length = 758 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 17/166 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G EF L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYALDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH V++++V A LE ++ Q ELR+ + IV Sbjct: 68 SNSIDESIASRAVLTHPADVIINVVDATCLERSLYMTLQL---------RELRRPM-IVV 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 L+++D + + + +L G S+ + + E LH Sbjct: 118 LNKMDALKRERVHLDLKQLEAFLGCPVLALSANNKEQVRRFKEKLH 163 >gi|308233759|ref|ZP_07664496.1| ferrous iron transport protein B [Atopobium vaginae DSM 15829] Length = 913 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 14/166 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 IG+ G PN GK+T +T + + ++P T+ ++ K I D+PGI + Sbjct: 7 IGLAGNPNCGKTTLFNELTGSNGYVGNWPGVTVEKKQAAWQKD-KSTIFVDLPGIYSLSP 65 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + I R TE L+++V A LE ++ Q I +VGL Sbjct: 66 YSPEEIVSRDYIMTESPSALINLVDATNLERSLYLTTQVIESGCPV----------VVGL 115 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 + D + +L+ G + S++ G I +++E H+ Sbjct: 116 NMADLLKERGDVVDTKKLSCALGVPVLQVSALRGTHIGELVEAAHN 161 >gi|78777575|ref|YP_393890.1| GTP-binding protein Era [Sulfurimonas denitrificans DSM 1251] gi|78498115|gb|ABB44655.1| GTP-binding protein Era [Sulfurimonas denitrificans DSM 1251] Length = 300 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 36/169 (21%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKST + S+ ++ T + IV + I D PG+ Sbjct: 15 VSLIGRPNAGKSTLMNSLLGENIAMVSQKANATRKRSNAIVMHNDTQIIFVDTPGL---- 70 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC--------ILDELSAYNSELR-- 270 H+ + ++F+ L+E ++A C I D + Y L+ Sbjct: 71 HEREKVLNQFM---------------LDEALKAMGDCDLIVYLAPITDSIENYEKFLKLN 115 Query: 271 --KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQ 317 K I+ LS+ID V D L +K Q Q F ++ IP+ Sbjct: 116 NSKVKHIIVLSKIDQVSQDKLFKK----ILQYNQFSDNFEALIPMAIPK 160 >gi|325002639|ref|ZP_08123751.1| GTP-binding protein [Pseudonocardia sp. P1] Length = 492 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 8/142 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 + + I+G NAGKS+ L +T A + D F TL P +G + + L D G Sbjct: 245 VPSVAIVGYTNAGKSSLLNQLTDAGVLVQDSLFATLDPTTRRSETPDG-RAYTLTDTVGF 303 Query: 217 IKN-AHQGAGIGDRFLKHTERTHVLLHIV---SALEENVQAAYQCILDELSAYNSELRKK 272 +++ HQ L+ R +L+H+V L ++ AA + +L E+ + Sbjct: 304 VRHLPHQLVEAFRSTLEEAARADLLVHVVDGSDPLPDDQIAAVRQVLVEIGEEQGGTMPR 363 Query: 273 IEIVGLSQIDTVDSDTLARKKN 294 E++ ++++D LAR ++ Sbjct: 364 -ELLVINKVDAAGDLALARLRH 384 >gi|320159556|ref|YP_004172780.1| GTP-binding protein era [Anaerolinea thermophila UNI-1] gi|319993409|dbj|BAJ62180.1| GTP-binding protein era homolog [Anaerolinea thermophila UNI-1] Length = 308 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 10/134 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST + K ++ P TT LGI+ + + D PGI K Sbjct: 14 VAVVGRPNVGKSTLMNRFLGQKIAAVSPRPQTTRRRQLGILTLPQAQMVFVDTPGIHKPV 73 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC---ILDELSAYNSELRKKIEIV 276 H+ G + L V+L +V A + C IL+ L + + ++ Sbjct: 74 HKLGEYMNQVALDALRDADVVLWLVDASVKPTDEDRLCAQRILEALGQNPANV-----LL 128 Query: 277 GLSQIDTVDSDTLA 290 L+++D V D A Sbjct: 129 ALNKMDQVPEDQRA 142 >gi|167031915|ref|YP_001667146.1| GTP-binding protein EngA [Pseudomonas putida GB-1] gi|189037155|sp|B0KPJ1|DER_PSEPG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166858403|gb|ABY96810.1| small GTP-binding protein [Pseudomonas putida GB-1] Length = 487 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 11/167 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ I ++G PN GKST +T+ + I D T G + FIL D GI Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDATWQGRSFILIDTGGI 60 Query: 217 I-KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + ++ L E +L +V A + AA Q I + L R K I Sbjct: 61 TGDEVGMDEKMAEQSLMAIEEADYVLFLVDA-RAGMTAADQMIAEHLRK-----RNKSAI 114 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + ++ID +D D +AR + +P S G GI ++E + Sbjct: 115 LVANKIDNIDPD-VARAEFSPMGMGNAIPVAGSQ--GRGINALMEAV 158 >gi|153213699|ref|ZP_01948951.1| ferrous iron transport protein B [Vibrio cholerae 1587] gi|124115760|gb|EAY34580.1| ferrous iron transport protein B [Vibrio cholerae 1587] Length = 758 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 17/166 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G EF L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYALDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH V++++V A LE ++ Q ELR+ + IV Sbjct: 68 SNSIDESIASRAVLTHPADVIINVVDATCLERSLYMTLQL---------RELRRPM-IVV 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 L+++D + + + +L G S+ + + E LH Sbjct: 118 LNKMDALKRERVHLDLKQLEAFLGCPVLALSANNKEQVRRFKEKLH 163 >gi|254226082|ref|ZP_04919680.1| ferrous iron transport protein B [Vibrio cholerae V51] gi|125621394|gb|EAZ49730.1| ferrous iron transport protein B [Vibrio cholerae V51] Length = 758 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 17/166 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G EF L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYALDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH V++++V A LE ++ Q ELR+ + IV Sbjct: 68 SNSIDESIASRAVLTHPADVIINVVDATCLERSLYMTLQL---------RELRRPM-IVV 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 L+++D + + + +L G S+ + + E LH Sbjct: 118 LNKMDALKRERVHLDLKQLEAFLGCPVLALSANNKEQVRRFKEKLH 163 >gi|328955946|ref|YP_004373279.1| ferrous iron transport protein B [Coriobacterium glomerans PW2] gi|328456270|gb|AEB07464.1| ferrous iron transport protein B [Coriobacterium glomerans PW2] Length = 793 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 23/208 (11%) Query: 125 FGNAHFKSST----NQAPYYANPGI-----LGQEKIIWLKLKLIADIGIIGLPNAGKSTF 175 +AH +SST ++ A+P I E L++ + + G N GK+T Sbjct: 79 LADAHVRSSTPAERDRLAAVAHPAIGERSSRPHESGAALRVGAPLSLALAGNQNCGKTTL 138 Query: 176 LASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NAHQGAGIGDRFLKHT 234 +T A + ++P T+ G ++ + E L D+PGI + + G + R Sbjct: 139 FNQLTGANQHVGNFPGVTVARKDGRMR-NHPEVTLTDLPGIYSLSPYTGEEVVSRQFILN 197 Query: 235 ERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK 292 E ++ IV A +E N+ Q + EL + + ++ L+ +D V ++ Sbjct: 198 EHPSAIIDIVDASNIERNLYLTLQLM---------ELERPL-VIALNMMDEVAANGGTVD 247 Query: 293 KNELATQCGQVPFEFSSITGHGIPQILE 320 N L + G S++ GI +++E Sbjct: 248 INVLESMLGVPVVPISAVRDEGIDELVE 275 >gi|262304191|gb|ACY44688.1| GTP-binding protein [Acanthocyclops vernalis] Length = 280 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 5/69 (7%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H L H+ E+ +V+ I D L Sbjct: 35 VVDIAGLVKGASEGQGLGNAFLSHIRACDALFHLCRTFEDKEITHVEGEVDPIRD-LDII 93 Query: 266 NSELRKKIE 274 N ELR K E Sbjct: 94 NEELRLKDE 102 >gi|225631062|ref|ZP_03787800.1| GTP-binding protein [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591242|gb|EEH12386.1| GTP-binding protein [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 441 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 5/91 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI-LADIPGIIKNA 220 I IIG PN GKSTFL + I T ++ I + E I L D GI + A Sbjct: 178 IAIIGRPNVGKSTFLNGLLAENRLITSSEPGTTRDSVDITYDHDGELITLIDTAGIRRKA 237 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSAL 247 + G+ RF++ + +R+HV++ ++ +L Sbjct: 238 NVVDGLESRFVEKSMESIKRSHVVVLMLDSL 268 >gi|167041994|gb|ABZ06731.1| putative GTPase of unknown function [uncultured marine microorganism HF4000_141E02] Length = 332 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + +IG PN GKST + ++ K I P TT LGIV + + +L D PG++ Sbjct: 56 VAVIGRPNVGKSTLVNALVGEKVSIVTSKPQTTQINILGIVHLPHAQIMLVDTPGLL 112 >gi|332798833|ref|YP_004460332.1| GTP-binding protein YchF [Tepidanaerobacter sp. Re1] gi|332696568|gb|AEE91025.1| GTP-binding protein YchF [Tepidanaerobacter sp. Re1] Length = 590 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 11/129 (8%) Query: 207 EFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN 266 EF+ DI G++K A++G G+G++FL H +H+V ++ +D + Sbjct: 15 EFV--DIAGLVKGANRGEGLGNKFLSHIREVDATIHVVRCFDDPNVVHVDGNVDPI---- 68 Query: 267 SELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + IEI+ L +I L E + ++ +T + + D + Sbjct: 69 ----RDIEIINLERIKDALERNLPAHSLEFTPEEQEIVKHMFLLTSKPVIYVANVSEDDL 124 Query: 327 FSIRGENEF 335 S+ ENE+ Sbjct: 125 MSVE-ENEY 132 >gi|320157031|ref|YP_004189410.1| ferrous iron transport protein A [Vibrio vulnificus MO6-24/O] gi|319932343|gb|ADV87207.1| ferrous iron transport protein A [Vibrio vulnificus MO6-24/O] Length = 758 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 17/172 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I +G PN+GK+T +T AK ++ ++ T+ G EF+L D+PGI + + Sbjct: 5 ILTVGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGRYHHAGDEFLLTDLPGIYSLDS 64 Query: 220 AHQGAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + I + TH +++++V A LE ++ Q L EL + Sbjct: 65 GNDSNSIDESIASRAVLTHPADMIINVVDATSLERSLYMTLQ--LRELG--------RPM 114 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 IV L+++D + + EL G S+ + + E LH + Sbjct: 115 IVVLNKMDALKRERQIINVAELEKSLGCPVISLSATNKAQVAEFKEKLHKSV 166 >gi|153828892|ref|ZP_01981559.1| ferrous iron transport protein B [Vibrio cholerae 623-39] gi|148875598|gb|EDL73733.1| ferrous iron transport protein B [Vibrio cholerae 623-39] Length = 758 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 17/166 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G EF L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYALDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH V++++V A LE ++ Q ELR+ + IV Sbjct: 68 SNSIDESIASRAVLTHPADVIINVVDATCLERSLYMTLQL---------RELRRPM-IVV 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 L+++D + + + +L G S+ + + E LH Sbjct: 118 LNKMDALKRERVHLDLKQLEAFLGCPVLALSANNKEQVRRFKEKLH 163 >gi|153801969|ref|ZP_01956555.1| ferrous iron transport protein B [Vibrio cholerae MZO-3] gi|124122483|gb|EAY41226.1| ferrous iron transport protein B [Vibrio cholerae MZO-3] Length = 758 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 17/166 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G EF L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGSFVHAGDEFSLTDLPGIYALDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH V++++V A LE ++ Q ELR+ + IV Sbjct: 68 SNSIDESIASRAVLTHPADVIINVVDATCLERSLYMTLQL---------RELRRPM-IVV 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 L+++D + + + +L G S+ + + E LH Sbjct: 118 LNKMDALKRERVHLDLKQLEAFLGCPVLALSANNKEQVRRFKEKLH 163 >gi|108761357|ref|YP_629613.1| putative GTP-binding protein HflX [Myxococcus xanthus DK 1622] gi|108465237|gb|ABF90422.1| putative GTP-binding protein HflX [Myxococcus xanthus DK 1622] Length = 550 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 12/135 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 I I+G NAGKST L ++T A+ + F TL P ++ +E I+ D G I++ Sbjct: 380 ISIVGYTNAGKSTLLNAITNAEVLAENKLFATLDPTSRRLRFPQEREVIITDTVGFIRDL 439 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELRKKIEI 275 + R L+ +LLH+V A +E V+A + IL+ L +L +K + Sbjct: 440 PKDLVAAFRATLEELYDASLLLHVVDAADPARDEQVEAV-ENILESL-----DLMEKPRL 493 Query: 276 VGLSQIDTVDSDTLA 290 + ++ D + D +A Sbjct: 494 MVWNKADLLPPDEVA 508 >gi|42520904|ref|NP_966819.1| GTP-binding protein EngA [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410645|gb|AAS14753.1| GTP-binding protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 441 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 5/91 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI-LADIPGIIKNA 220 I IIG PN GKSTFL + I T ++ I + E I L D GI + A Sbjct: 178 IAIIGRPNVGKSTFLNGLLAENRLITSSEPGTTRDSVDITYDHDGELITLIDTAGIRRKA 237 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSAL 247 + G+ RF++ + +R+HV++ ++ +L Sbjct: 238 NVVDGLESRFVEKSMESIKRSHVVVLMLDSL 268 >gi|85712959|ref|ZP_01043998.1| GTPase Era [Idiomarina baltica OS145] gi|85693197|gb|EAQ31156.1| GTPase Era [Idiomarina baltica OS145] Length = 315 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I + P TT + LG+ EG + + D PG+ Sbjct: 26 VAIVGRPNVGKSTMLNRILGQKVSITSSKPQTTRHRILGVDTEGDYQTVYVDTPGM 81 >gi|307245234|ref|ZP_07527325.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254181|ref|ZP_07536026.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258646|ref|ZP_07540381.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853878|gb|EFM86092.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862881|gb|EFM94830.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867303|gb|EFM99156.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 506 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 17/174 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHANIAGYDFIVIDTGG-IDGT 63 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A V A D A R+K +V Sbjct: 64 EEGVEEKMAEQSLLAIEEADVVLFLVDARAGLVPA------DIGIAQYLRQREKTTVVVA 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 ++ D +D+D+ + +L G+V + ++ G G+ Q++ D++ + GE Sbjct: 118 NKTDGIDADSHCAEFYQLG--LGEVE-QIAAAQGRGVTQLI----DQVLAPLGE 164 >gi|297568490|ref|YP_003689834.1| GTP-binding protein Era [Desulfurivibrio alkaliphilus AHT2] gi|296924405|gb|ADH85215.1| GTP-binding protein Era [Desulfurivibrio alkaliphilus AHT2] Length = 308 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PNAGKST L ++ K I + P TT LG+ + ++ + D PG+ Sbjct: 15 VALVGPPNAGKSTLLNNLLGQKISIVSPKPQTTRNRVLGVFNQPTRQIVFLDTPGL---- 70 Query: 221 HQG-AGIGDRFLKHTERT 237 HQG + + +K RT Sbjct: 71 HQGRSRLNSEMVKIARRT 88 >gi|328943682|ref|ZP_08241147.1| ferrous iron transport protein B [Atopobium vaginae DSM 15829] gi|327491651|gb|EGF23425.1| ferrous iron transport protein B [Atopobium vaginae DSM 15829] Length = 913 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 14/166 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 IG+ G PN GK+T +T + + ++P T+ ++ K I D+PGI + Sbjct: 7 IGLAGNPNCGKTTLFNELTGSNGYVGNWPGVTVEKKQAAWQKD-KSTIFVDLPGIYSLSP 65 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + I R TE L+++V A LE ++ Q I +VGL Sbjct: 66 YSPEEIVSRDYIMTESPSALINLVDATNLERSLYLTTQVIESGCPV----------VVGL 115 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 + D + +L+ G + S++ G I +++E H+ Sbjct: 116 NMADLLKERGDVVDTKKLSCALGVPVLQVSALRGTHIGELVEAAHN 161 >gi|261345330|ref|ZP_05972974.1| ribosome-associated GTPase EngA [Providencia rustigianii DSM 4541] gi|282566664|gb|EFB72199.1| ribosome-associated GTPase EngA [Providencia rustigianii DSM 4541] Length = 491 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + + L+ E V+L +V A + A DE A + RKK Sbjct: 60 IDGTEEGVETHMAAQSLQAIEEADVVLFMVDARAGLMPA------DEGIAKHLRSRKKKT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + ++ D +D++ + L G++ + ++ G G+ Q++E Sbjct: 114 YLVANKTDGIDANIVVGDFYSLG--LGEI-YPIAASHGRGVTQLIE 156 >gi|218200504|gb|EEC82931.1| hypothetical protein OsI_27892 [Oryza sativa Indica Group] Length = 474 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 12/71 (16%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKP------------KIADYPFTTLYPNLGIVKEGYK 206 I + ++G PN GKS+ + ++ KP ++ YPFTT +G + ++ Sbjct: 261 IPTLCLVGSPNVGKSSLVRILSSGKPEYLRRLIPFSYFQVCSYPFTTRGILMGHIVSNHE 320 Query: 207 EFILADIPGII 217 F + D PG++ Sbjct: 321 RFQVTDTPGLL 331 >gi|13959677|sp|Q49768|ERA_MYCLE RecName: Full=GTPase Era Length = 300 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 11/167 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIV-KEGYKEFILADIPGIIK- 218 + +IG PN GKST ++ K I P TT + GIV +EG + +L D PG+ + Sbjct: 9 VCLIGRPNTGKSTLTNALVGTKVAITSMKPQTTRHTIRGIVHREGNFQIVLVDTPGLHRP 68 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 G + D ++ T L+ + +E + I++++ + K I +V + Sbjct: 69 RTLLGKRLND-LVRDTYTEVDLIGLCIPADEATGPGDRWIVNQIRSVAP---KTILVVIV 124 Query: 279 SQIDTVDSDTLARK---KNELATQCGQVPFEFSSITGHGIPQILECL 322 ++ID V D L+ + ++L ++ S++TG + +++ L Sbjct: 125 TKIDKVPKDRLSAQLVAVSDLVADSAEI-VPVSAVTGEQVDVLIDVL 170 >gi|291524971|emb|CBK90558.1| GTP-binding protein Era [Eubacterium rectale DSM 17629] gi|291529105|emb|CBK94691.1| GTP-binding protein Era [Eubacterium rectale M104/1] Length = 303 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 23/138 (16%) Query: 162 IGIIGLPNAGKSTFL-------ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIP 214 + IIG PN GKST + ++T KP+ T+Y ++ ++G + + D P Sbjct: 10 VTIIGRPNVGKSTLMNRLIGQKIAITSNKPQTTRNRIQTVYTDM---EKG--QIVFLDTP 64 Query: 215 GIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRK 271 GI K ++ +G+ + E+T + +V L E A Q I+++L N+ + Sbjct: 65 GIHKAKNK---LGEYMVNVAEKTLNEVDVVLWLVEPTNFIGAGEQHIIEQLKKVNTPV-- 119 Query: 272 KIEIVGLSQIDTVDSDTL 289 I+ ++++DTV+ + + Sbjct: 120 ---ILIINKVDTVEKEKV 134 >gi|289811471|ref|ZP_06542100.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 119 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 4/94 (4%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 10 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTG 69 Query: 215 GIIKNAHQG--AGIGDRFLKHTERTHVLLHIVSA 246 G I G + ++ L E V+L +V A Sbjct: 70 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDA 102 >gi|328882360|emb|CCA55599.1| GTP-binding protein Era [Streptomyces venezuelae ATCC 10712] Length = 316 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 11/132 (8%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I ++ P TT + GIV + IL D PG+ K Sbjct: 23 VGRPNAGKSTLTNALVGQKVAITSNRPQTTRHTVRGIVHRPEAQLILVDTPGLHKPR--- 79 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ ++ + + I EL+ ++K ++ +++ Sbjct: 80 TLLGERLNDVVRTTWAEVDVIGFCLPADQKLGPGDKFIAKELAG----IKKTPKVAIITK 135 Query: 281 IDTVDSDTLARK 292 D VDS TLA + Sbjct: 136 TDLVDSKTLAEQ 147 >gi|311278558|ref|YP_003940789.1| ribosome-associated GTPase EngA [Enterobacter cloacae SCF1] gi|308747753|gb|ADO47505.1| ribosome-associated GTPase EngA [Enterobacter cloacae SCF1] Length = 492 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G + +EFI D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L +V A + A + I L A R+K Sbjct: 60 IDGTEEGVETRMAEQSLLAIEEADVVLFMVDA-RAGLMPADEAIAKHLRA-----REKPT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + ++ D +D D L G++ + ++ G G+ +LE Sbjct: 114 FLVANKTDGIDPDQAVSDFWSLG--LGEI-YPIAASHGRGVTSLLE 156 >gi|256005042|ref|ZP_05430013.1| GTP-binding protein HSR1-related protein [Clostridium thermocellum DSM 2360] gi|255991010|gb|EEU01121.1| GTP-binding protein HSR1-related protein [Clostridium thermocellum DSM 2360] Length = 148 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 27/54 (50%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 I + G PN GKST S+T ++P T+ G K K FI+ DIPG Sbjct: 29 IALAGNPNVGKSTVFNSLTGLNQHTGNWPGKTVTNAQGRYKHKDKNFIMVDIPG 82 >gi|225630952|ref|YP_002727743.1| GTP-binding protein [Wolbachia sp. wRi] gi|225592933|gb|ACN95952.1| GTP-binding protein [Wolbachia sp. wRi] Length = 441 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 5/91 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI-LADIPGIIKNA 220 I IIG PN GKSTFL + I T ++ I + E I L D GI + A Sbjct: 178 IAIIGRPNVGKSTFLNGLLAENRLITSSEPGTTRDSVDITYDHDGELITLIDTAGIRRKA 237 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSAL 247 + G+ RF++ + +R+HV++ ++ +L Sbjct: 238 NVVDGLESRFVEKSMESIKRSHVVVLMLDSL 268 >gi|37679225|ref|NP_933834.1| Fe2+ transport system protein B [Vibrio vulnificus YJ016] gi|37197968|dbj|BAC93805.1| Fe2+ transport system protein B [Vibrio vulnificus YJ016] Length = 761 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 17/172 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I +G PN+GK+T +T AK ++ ++ T+ G EF+L D+PGI + + Sbjct: 8 ILTVGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGRYHHAGDEFLLTDLPGIYSLDS 67 Query: 220 AHQGAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + I + TH +++++V A LE ++ Q L EL + Sbjct: 68 GNDSNSIDESIASRAVLTHPADMIINVVDATSLERSLYMTLQ--LRELG--------RPM 117 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 IV L+++D + + EL G S+ + + E LH + Sbjct: 118 IVVLNKMDALKRERQIINVAELEKSLGCPVISLSATNKAQVAEFKEKLHKSV 169 >gi|330791039|ref|XP_003283602.1| hypothetical protein DICPUDRAFT_6420 [Dictyostelium purpureum] gi|325086462|gb|EGC39851.1| hypothetical protein DICPUDRAFT_6420 [Dictyostelium purpureum] Length = 461 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 6/91 (6%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYP-NLGIVKEGYKEFILADIPGIIKN 219 I I+G PNAGKS+ L + + ++D P TT P + + E L D GI + Sbjct: 198 ISIVGKPNAGKSSLLNKIIDEQRSIVSDIPGTTHDPVDCNFLWRDKHELCLVDTAGIRRR 257 Query: 220 AHQGAGIGDR----FLKHTERTHVLLHIVSA 246 + G+ LK E++HV+ ++ A Sbjct: 258 STHKVGLEKSSVLWALKSIEKSHVVFLVIDA 288 >gi|312879949|ref|ZP_07739749.1| GTP-binding proten HflX [Aminomonas paucivorans DSM 12260] gi|310783240|gb|EFQ23638.1| GTP-binding proten HflX [Aminomonas paucivorans DSM 12260] Length = 380 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 36/171 (21%), Positives = 78/171 (45%), Gaps = 12/171 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI--ADYPFTTL-YPNLGIVKEGYKEFILADIPGIIK 218 + ++G N+GK+T L ++ PK+ AD F TL + ++ + + D G I+ Sbjct: 193 VALVGYTNSGKTTLLRRLS-GDPKVQGADRLFATLDTTSRSVLLPSGQRVLFTDTVGFIR 251 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 Q L+ T ++L ++ + V+A Y+ +L+ L A + ++ ++ Sbjct: 252 RLPPQLVAAFRATLEETRDADLILVVLDGADPQVEAHYEVVLETLEALEAAQVPRVVLLN 311 Query: 278 LSQIDTVDS--DTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + + ++ D L+ L G+ S+ TG G+ +LE + +++ Sbjct: 312 KADLSAAEASEDCLS-----LLRARGERIVSGSASTGEGLEALLEAVENRL 357 >gi|300114862|ref|YP_003761437.1| ribosome-associated GTPase EngA [Nitrosococcus watsonii C-113] gi|299540799|gb|ADJ29116.1| ribosome-associated GTPase EngA [Nitrosococcus watsonii C-113] Length = 464 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 8/106 (7%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 A + ++G PN GKST +TR++ +AD P T G+ G + F + D GI++ Sbjct: 3 ALVALVGRPNVGKSTLFNRLTRSRDALVADQPGVTRDRQYGLAYCGEQSFFVVDTGGIME 62 Query: 219 NAHQ-GAGIGDRFLKHTERTHVLLHIV------SALEENVQAAYQC 257 + G+ + + E V+ +V S+L+E + +C Sbjct: 63 QESEIGSLMRGQAQLAIEEADVIFFLVDAREGLSSLDEEIAEWLRC 108 >gi|222055248|ref|YP_002537610.1| GTP-binding protein Era [Geobacter sp. FRC-32] gi|259645945|sp|B9M913|ERA_GEOSF RecName: Full=GTPase Era gi|221564537|gb|ACM20509.1| GTP-binding protein Era [Geobacter sp. FRC-32] Length = 297 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 19/171 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 + IIG PN GKST L + K I +D P TT GI + + D PGI + Sbjct: 11 VSIIGRPNVGKSTLLNKILGDKIVITSDKPQTTRNRIQGIHNLPGCQIVFIDTPGIHRAK 70 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQ--CILDELSAYNSELRKKIEIVG 277 + + D L + V+L +V A + + A Q IL L++ + + ++ Sbjct: 71 SRLNKYMVDVALSSIKEVDVILFLVEA---DTKPANQEETILGALASAEAPV-----VLV 122 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 ++++D V ++L K +A G PF S++TG ++++ + D Sbjct: 123 INKVDLVAKESLLEK---MAAYSGLYPFREVIPVSALTGDNTGRLVQVVRD 170 >gi|288803891|ref|ZP_06409316.1| GTP-binding protein Era [Prevotella melaninogenica D18] gi|288333656|gb|EFC72106.1| GTP-binding protein Era [Prevotella melaninogenica D18] Length = 293 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 8/93 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + + K IA + TT + +GIV + + +D PG++K Sbjct: 7 VNIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTEDTQIVFSDTPGVLKPN 66 Query: 221 HQGAGIGDRFLKHTER----THVLLHIVSALEE 249 ++ + + L+ +E +LL++ +E+ Sbjct: 67 YK---MQEMMLQFSESALADADILLYVTDVVED 96 >gi|281418081|ref|ZP_06249101.1| GTP-binding protein HSR1-related protein [Clostridium thermocellum JW20] gi|281409483|gb|EFB39741.1| GTP-binding protein HSR1-related protein [Clostridium thermocellum JW20] gi|316939880|gb|ADU73914.1| Ferrous iron transport protein B domain-containing protein [Clostridium thermocellum DSM 1313] Length = 716 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 13/166 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG---IIK 218 I + G PN GKST S+T ++P T+ G K K FI+ DIPG ++ Sbjct: 29 IALAGNPNVGKSTVFNSLTGLNQHTGNWPGKTVTNAQGRYKHKDKNFIMVDIPGTYSLMA 88 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 N+ + D V++ + LE N+ Q + E+ K+ +V + Sbjct: 89 NSVEEEVARDFVCFGQPDATVVVTDATCLERNLNLVLQTL---------EITNKV-VVCV 138 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 + ID + + N+L+ G ++ + G+ ++++ +++ Sbjct: 139 NLIDEAERKKIKIDYNKLSKHLGVPVIPTNARSNEGLDKLMDAVYE 184 >gi|84500560|ref|ZP_00998809.1| GTP-binding protein Era [Oceanicola batsensis HTCC2597] gi|84391513|gb|EAQ03845.1| GTP-binding protein Era [Oceanicola batsensis HTCC2597] Length = 301 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 70/172 (40%), Gaps = 23/172 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 + +IG PNAGKST + AK I + T + G+ EG + + D PG+ + Sbjct: 8 VALIGEPNAGKSTLTNRMVGAKVSIVTHKVQTTRARIRGVAIEGDSQIVFVDTPGLFQPR 67 Query: 220 --------AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 A +G+ D L VLL V A V + IL+ L R Sbjct: 68 RRLDRAMVAAAWSGVADADLT------VLL--VEA-HRGVTPGVEKILETLQQMAKGRRV 118 Query: 272 KIEIVGLSQIDTVDSDTLARKKNEL-ATQCGQVPFEFSSITGHGIPQILECL 322 + I ++ID V++ L L A + F S+ GHG+ + E L Sbjct: 119 ALAI---NKIDRVEAKQLLDLTERLNAAYPFEKTFMISAEKGHGVQDLKEWL 167 >gi|325263065|ref|ZP_08129800.1| ferrous iron transport protein B [Clostridium sp. D5] gi|324031458|gb|EGB92738.1| ferrous iron transport protein B [Clostridium sp. D5] Length = 679 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 30/54 (55%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 IG IG PN GK+T + T A K+A++P T+ G +K+ L D+PG Sbjct: 7 IGFIGNPNCGKTTLFNAYTGANLKVANWPGVTVEKVEGAIKDHDLNIRLVDLPG 60 >gi|319760225|ref|YP_004124163.1| GTP-binding protein [Candidatus Blochmannia vafer str. BVAF] gi|318038939|gb|ADV33489.1| GTP-binding protein [Candidatus Blochmannia vafer str. BVAF] Length = 428 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 4/129 (3%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-KEGYKEFILADIPGII 217 I I ++G N GKST +T A A F TL P + K IL D G I Sbjct: 200 IPTISLVGYTNVGKSTLFNIMTSAHVDTAKKLFVTLDPTFRRIGKRKKSSAILVDTVGFI 259 Query: 218 KNAHQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +N + + L+ T + +LLH+V + + + D L N ++ ++ Sbjct: 260 QNLPKDLITSFKSTLQETVESTLLLHVVDVSSNKINQHIKTVNDILREIN--IKNIPVLL 317 Query: 277 GLSQIDTVD 285 +++ID +D Sbjct: 318 IMNKIDLID 326 >gi|24640879|ref|NP_727364.1| CG1354, isoform B [Drosophila melanogaster] gi|22833047|gb|AAN09615.1| CG1354, isoform B [Drosophila melanogaster] Length = 348 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + H+ A E+ +V+ + D L Sbjct: 40 VVDIAGLVKGAAEGQGLGNDFLSHISACDAIFHLCRAFEDPDVTHVEGEVDPVRD-LEII 98 Query: 266 NSELRKKIEIVGLSQIDTVDS 286 + ELR K E L +D ++ Sbjct: 99 SEELRLKDEENLLKNLDKLEK 119 >gi|332670096|ref|YP_004453104.1| GTP-binding proten HflX [Cellulomonas fimi ATCC 484] gi|332339134|gb|AEE45717.1| GTP-binding proten HflX [Cellulomonas fimi ATCC 484] Length = 506 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 18/179 (10%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADI 213 K I + I G NAGKS+ L +T A + + F TL P + + + + LAD Sbjct: 280 KKNAIPSVAIAGYTNAGKSSLLNRLTNAGVLVENALFATLDPTVRRAETTDGRVYTLADT 339 Query: 214 PGIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSE 268 G ++ HQ L+ +LLH+V A E + A D A + Sbjct: 340 VGFVRALPHQLVEAFRSTLEEVADADLLLHVVDASHPDPEGQIAAVRHVFADIPGAMDVP 399 Query: 269 LRKKIEIVGLSQIDTVDSDTLAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI+ L++ D ++ +AR + E+ + S+ TG GI ++ + D++ Sbjct: 400 -----EIIVLNKADRASAEAIARLRSREVHSVV------VSAHTGEGIAELQALIADQL 447 >gi|262304197|gb|ACY44691.1| GTP-binding protein [Acheta domesticus] Length = 280 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAY 265 + DI G+++ A +G G+G+ FL H + L H+ A ++ +V+ + D L Sbjct: 35 VVDIAGLVQGAAEGKGLGNAFLSHIKACDALFHLCRAFDDPDVTHVEGEVDPVRD-LDII 93 Query: 266 NSELRKKIEIVGLSQIDTVDSDTL 289 + ELR K E L +D ++ L Sbjct: 94 SEELRLKDEEYLLGHLDKMERTVL 117 >gi|260892064|ref|YP_003238161.1| GTP-binding protein Era [Ammonifex degensii KC4] gi|260864205|gb|ACX51311.1| GTP-binding protein Era [Ammonifex degensii KC4] Length = 300 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST + + K I +D P TT + LG++ + + D PGI K Sbjct: 11 VSVVGRPNVGKSTLINHLVGQKVAIVSDKPQTTRHRILGVLTLPEAQIVFVDTPGIHKPR 70 Query: 221 HQ 222 H+ Sbjct: 71 HR 72 >gi|302345899|ref|YP_003814252.1| GTP-binding protein Era [Prevotella melaninogenica ATCC 25845] gi|302149370|gb|ADK95632.1| GTP-binding protein Era [Prevotella melaninogenica ATCC 25845] Length = 293 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 8/93 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + + K IA + TT + +GIV + + +D PG++K Sbjct: 7 VNIVGNPNVGKSTLMNQLVGEKLSIATFKAQTTRHRIMGIVNTEDTQIVFSDTPGVLKPN 66 Query: 221 HQGAGIGDRFLKHTER----THVLLHIVSALEE 249 ++ + + L+ +E +LL++ +E+ Sbjct: 67 YK---MQEMMLQFSESALADADILLYVTDVVED 96 >gi|237807666|ref|YP_002892106.1| small GTP-binding protein [Tolumonas auensis DSM 9187] gi|259645887|sp|C4LC41|DER_TOLAT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|237499927|gb|ACQ92520.1| small GTP-binding protein [Tolumonas auensis DSM 9187] Length = 498 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 13/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR++ +AD+P T G FI+ D G I + Sbjct: 5 VALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAVVDDMNFIVVDTGG-IDGS 63 Query: 221 HQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L+ + + V+L +V A V +A I + L +KK+ +V Sbjct: 64 EEGIEVKMAEQSLQAIDESDVVLFMVDA-RAGVTSADIGIANHL----RRQKKKVFLVA- 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D D LA G+V ++ ++ G G+ +LE Sbjct: 118 NKTDGLDGDVHCADFYSLA--LGEV-YQIAASHGRGVTSLLE 156 >gi|300770940|ref|ZP_07080817.1| GTP-binding protein Era [Sphingobacterium spiritivorum ATCC 33861] gi|300762213|gb|EFK59032.1| GTP-binding protein Era [Sphingobacterium spiritivorum ATCC 33861] Length = 292 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + IIG PNAGKST + ++ K I TT + +GIV + + + +D PG+IK Sbjct: 8 VSIIGKPNAGKSTLMNALVGEKMSIITPKAQTTRHRIMGIVNDENHQIVFSDTPGVIK 65 >gi|194397601|ref|YP_002037604.1| GTP-binding protein Era [Streptococcus pneumoniae G54] gi|226741240|sp|B5E488|ERA_STRP4 RecName: Full=GTPase Era gi|194357268|gb|ACF55716.1| GTP-binding protein Era homolog [Streptococcus pneumoniae G54] Length = 299 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V I D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQXIAIMXDKAXTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVESAYSTLREVDTVLFMVPA-DEARGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + ++++ L + + Sbjct: 119 VVNKIDKVHPDQLLSQIDDFRNQMDFKEIVP--ISALQGNNVSRLVDILSENL 169 >gi|145631633|ref|ZP_01787398.1| GTP-binding protein EngA [Haemophilus influenzae R3021] gi|144982767|gb|EDJ90296.1| GTP-binding protein EngA [Haemophilus influenzae R3021] Length = 504 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHIAGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L + ++L +V A +A ++ Y + + K IV Sbjct: 65 EEGVEEKMAEQSLLAIDEADIVLFLVDA-----RAGLTAADIGIANYLRQRQNKTTIVVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G++ + ++ G G+ Q++E Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGEIE-QIAASQGRGVTQLME 158 >gi|119946045|ref|YP_943725.1| GTP-binding protein, HSR1-related [Psychromonas ingrahamii 37] gi|119864649|gb|ABM04126.1| GTP-binding protein, HSR1-related [Psychromonas ingrahamii 37] Length = 443 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 4/128 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFIL-ADIPGIIKN- 219 + ++G NAGKS+ + ++T ++ + D F TL + ++ + IL +D G IK Sbjct: 224 VALVGYTNAGKSSLMRALTDSEVLVEDKLFATLDTTVRTLQPPTQPRILISDTVGFIKKL 283 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H L+ + +LL++V A +EN A + L+ N + + ++ L+ Sbjct: 284 PHDLVASFHSTLEEAKDADLLLYVVDASDENFTAQLAVVDHVLAELNVDASNR--LLLLN 341 Query: 280 QIDTVDSD 287 ++D + + Sbjct: 342 KVDCISEE 349 >gi|333027190|ref|ZP_08455254.1| putative GTP-binding protein Era [Streptomyces sp. Tu6071] gi|332747042|gb|EGJ77483.1| putative GTP-binding protein Era [Streptomyces sp. Tu6071] Length = 316 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 11/151 (7%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I ++ P TT + GIV + IL D PG+ K Sbjct: 23 VGRPNAGKSTLTNALVGQKVAITSNRPQTTRHTVRGIVHRPEAQLILVDTPGLHKPR--- 79 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ ++ + + I EL+ +++ ++ +++ Sbjct: 80 TLLGERLNDVVRATWAEVDVIGFCLPADQKIGPGDRFIAKELAG----IKRTPKVAIVTK 135 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEFSSIT 311 D VDS LA + + ++ FE++ I Sbjct: 136 TDLVDSKRLAEQLMAIDALGRELGFEWAEIV 166 >gi|309776437|ref|ZP_07671423.1| ferrous iron transport protein B [Erysipelotrichaceae bacterium 3_1_53] gi|308915828|gb|EFP61582.1| ferrous iron transport protein B [Erysipelotrichaceae bacterium 3_1_53] Length = 671 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 79/170 (46%), Gaps = 18/170 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G N GK+T +T + + ++P T+ +G +K +KE L D+PGI + Sbjct: 6 IALAGNQNCGKTTLFNRLTGSNQHVGNFPGVTVEKKMGQIK-SFKEASLVDLPGIYSLSP 64 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E ++++IV A +E N+ + Q + EL+K + ++ L Sbjct: 65 YTSEEVVTRDFILKENPDIIINIVDATNIERNLYLSLQLM---------ELQKPM-VIAL 114 Query: 279 SQIDTVDS--DTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + +D V + +++ +K +C VP S GI ++ + +I Sbjct: 115 NMMDEVTASGNSIDVEKLSRHLRCPVVPISASK--NEGIDDLIRVVKKQI 162 >gi|225572795|ref|ZP_03781550.1| hypothetical protein RUMHYD_00986 [Blautia hydrogenotrophica DSM 10507] gi|225039852|gb|EEG50098.1| hypothetical protein RUMHYD_00986 [Blautia hydrogenotrophica DSM 10507] Length = 789 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 36/165 (21%), Positives = 76/165 (46%), Gaps = 14/165 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + ++G N GK+T +T AK + ++P T+ G+++ G+K ++ D+PGI Sbjct: 127 VLTFALVGNQNCGKTTLFNRLTGAKQHVGNFPGVTVDRKDGVIR-GHKNTLITDLPGIYS 185 Query: 219 -NAHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEI 275 + + I R E+ +++IV A +E N+ Q + EL + + Sbjct: 186 MSPYSNEEIVTREFILREKPRGIINIVDATNIERNMYLTMQLM---------ELGFPM-V 235 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + L+ +D + + + N++ G S+ G GI ++++ Sbjct: 236 IALNMMDELRENGGSVLVNDMEAALGVPVIPISAAKGEGIEELIQ 280 >gi|213027904|ref|ZP_03342351.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 153 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 10 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTG 69 Query: 215 GIIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 70 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREK 122 Query: 273 IEIVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 123 PTFLVANKTDGLDPD 137 >gi|254392577|ref|ZP_05007754.1| GTP-binding protein Era [Streptomyces clavuligerus ATCC 27064] gi|294812543|ref|ZP_06771186.1| GTP-binding protein Era [Streptomyces clavuligerus ATCC 27064] gi|197706241|gb|EDY52053.1| GTP-binding protein Era [Streptomyces clavuligerus ATCC 27064] gi|294325142|gb|EFG06785.1| GTP-binding protein Era [Streptomyces clavuligerus ATCC 27064] Length = 317 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 11/132 (8%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I ++ P TT + GIV + IL D PG+ K Sbjct: 24 VGRPNAGKSTLTNALVGQKVAITSNRPQTTRHTVRGIVHRPEAQLILVDTPGLHKPR--- 80 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ ++ + + I EL+ ++K ++ +++ Sbjct: 81 TLLGERLNDVVRTTWAEVDVIGFCLPADQKLGPGDRFIAKELAG----IKKTPKVAIVTK 136 Query: 281 IDTVDSDTLARK 292 D VDS TLA + Sbjct: 137 TDLVDSRTLAEQ 148 >gi|153855189|ref|ZP_01996373.1| hypothetical protein DORLON_02387 [Dorea longicatena DSM 13814] gi|149752358|gb|EDM62289.1| hypothetical protein DORLON_02387 [Dorea longicatena DSM 13814] Length = 422 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 18/167 (10%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN-A 220 I+G NAGKST L ++T A D F TL P +K +E ++ D G I+ Sbjct: 202 AIVGYTNAGKSTLLNTLTGAGIFAEDKLFATLDPTTRDLKLPSGQEILMTDTVGFIRKLP 261 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKIEIV 276 H L+ ++LH+V A ++E + Y+ + N ++ K I Sbjct: 262 HHLIEAFRSTLEEARYADIILHVVDASNPQMDEQMHTVYETL------QNLGVKDKPVIT 315 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 ++ID ++ + R + + S+ TG GI + L+ + Sbjct: 316 VFNKIDRMEDIWVPRDLH------ADYYVKISARTGEGITEFLQSVE 356 >gi|160879343|ref|YP_001558311.1| ferrous iron transport protein B [Clostridium phytofermentans ISDg] gi|160428009|gb|ABX41572.1| ferrous iron transport protein B [Clostridium phytofermentans ISDg] Length = 714 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 14/160 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K G+ + IL D+PGI + Sbjct: 5 IALTGNPNCGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLK-GFTDVILTDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ +++I+ + LE N+ Q + EL + I+ + Sbjct: 64 YTLEEVVARNYLMGEKPDAIINIIDGTNLERNLYLTTQLL---------ELSIPV-IMAI 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 + +D V+ ++L + G E S++ G GI + Sbjct: 114 NMMDVVEKSGDKIHIDKLKEKLGCDIVEISALRGKGISDL 153 >gi|313886114|ref|ZP_07819849.1| ribosome biogenesis GTPase Era [Porphyromonas asaccharolytica PR426713P-I] gi|332300531|ref|YP_004442452.1| GTP-binding protein Era-like-protein [Porphyromonas asaccharolytica DSM 20707] gi|312924460|gb|EFR35234.1| ribosome biogenesis GTPase Era [Porphyromonas asaccharolytica PR426713P-I] gi|332177594|gb|AEE13284.1| GTP-binding protein Era-like-protein [Porphyromonas asaccharolytica DSM 20707] Length = 306 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 8/94 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + + + I TT + LGIV + + + +D PG+++ + Sbjct: 21 VSIVGNPNVGKSTLMNYLVGERISIITSKAQTTRHRILGIVNSDHMQVVYSDTPGVLQPS 80 Query: 221 HQGAGIGDRFLKHTER----THVLLHIVSALEEN 250 ++ + +R ++E+ +LL++ +EE Sbjct: 81 YK---LQERMRAYSEQALEDADLLLYVTDTMEER 111 >gi|262166189|ref|ZP_06033926.1| ferrous iron transport protein B [Vibrio mimicus VM223] gi|262025905|gb|EEY44573.1| ferrous iron transport protein B [Vibrio mimicus VM223] Length = 758 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 17/172 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I +G PN+GK+T +T AK ++ ++ T+ G EF+L D+PGI + + Sbjct: 5 ILTVGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGSFSHAGDEFLLTDLPGIYALDS 64 Query: 220 AHQGAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + I + TH +++++V A LE ++ Q EL++ + Sbjct: 65 GNDTNSIDESIASRAVLTHQTDLIINVVDATCLERSLYMTLQL---------RELQRPM- 114 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 IV L+++D + + + +L + G S+ + + + E LH + Sbjct: 115 IVVLNKMDVLKRERVHVDIKQLESFLGCPVLALSANSKEQVRRFKEKLHKLV 166 >gi|163790976|ref|ZP_02185398.1| GTP-binding protein [Carnobacterium sp. AT7] gi|159873715|gb|EDP67797.1| GTP-binding protein [Carnobacterium sp. AT7] Length = 420 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 2/100 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP-NLGIVKEGYKEFILADIPGIIKN- 219 IG++G NAGKST L +T+A + F TL P ++ L D G I++ Sbjct: 206 IGLMGYTNAGKSTLLNKLTQADTYEENQLFATLDPLTRQLMLPSGMNVTLTDTVGFIQDL 265 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL 259 Q L+ T+ +LLH+V A EN+ Q ++ Sbjct: 266 PTQLIESFKSTLEETKGVDLLLHVVDASAENMAGHEQTVV 305 >gi|85374078|ref|YP_458140.1| GTPase [Erythrobacter litoralis HTCC2594] gi|84787161|gb|ABC63343.1| GTPase [Erythrobacter litoralis HTCC2594] Length = 433 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN 219 I ++G NAGKST +T A+ D F TL P + I G ++ IL+D G I + Sbjct: 204 IALVGYTNAGKSTLFNRLTGAEVMAEDLLFATLDPTMRAIALPGVEKAILSDTVGFISD 262 >gi|315635985|ref|ZP_07891246.1| ferrous iron transport protein B [Arcobacter butzleri JV22] gi|315479769|gb|EFU70441.1| ferrous iron transport protein B [Arcobacter butzleri JV22] Length = 702 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 11/164 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG--I 216 + I ++G PN GKS + S++ AK K+ ++P T+ K EF + D+PG Sbjct: 5 VIKIALVGQPNVGKSMLINSISGAKLKVGNFPGVTVSKEEVFFKYKDYEFQIIDLPGSYS 64 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + N I FL + ++L++V + N+Q + L L K I+ Sbjct: 65 LNNYSIEEKITKDFL-YNSTYDLILNVVDS--TNLQR------NLLLTTELLLLNKKMII 115 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 L+ ID + + + EL + G+ + S+ GI +L+ Sbjct: 116 ALNMIDEANQELIEIDDVELGSILGRACVKTSASKKIGIQTLLD 159 >gi|262304275|gb|ACY44730.1| GTP-binding protein [Periplaneta americana] Length = 274 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + L H+ A E+ +V+ + D L Sbjct: 29 VVDIAGLVKGASEGQGLGNAFLSHIKACDALFHLCRAFEDEDVTHVEGEVNPVRD-LEII 87 Query: 266 NSELRKKIEIVGLSQIDTVDSDTL 289 + ELR K E S ++ ++ L Sbjct: 88 SEELRLKDEEYLNSHLEKLERTVL 111 >gi|262304207|gb|ACY44696.1| GTP-binding protein [Argulus sp. Arg2] Length = 280 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 5/67 (7%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + L H+ A +++ ++ + D L Sbjct: 35 IVDIAGLVKGASEGQGLGNAFLSHIKACDALFHLCRAFDDDEVTHIEGEINPVRD-LDII 93 Query: 266 NSELRKK 272 N ELR K Sbjct: 94 NEELRLK 100 >gi|225174625|ref|ZP_03728623.1| GTP-binding proten HflX [Dethiobacter alkaliphilus AHT 1] gi|225169752|gb|EEG78548.1| GTP-binding proten HflX [Dethiobacter alkaliphilus AHT 1] Length = 425 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 9/110 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII-KN 219 + ++G NAGKST L ++T A D F TL P V+ G F+L D G I K Sbjct: 198 VTLVGYTNAGKSTLLNALTNADVFAEDKLFATLDPTTRQVELPGGSMFLLTDTVGFIQKL 257 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC-----ILDELSA 264 H L+ +LLH+V + QAA Q IL +L A Sbjct: 258 PHHLVAAFRATLEEVLEADLLLHVVDT--SHPQAAEQMNAVQNILQQLGA 305 >gi|171057288|ref|YP_001789637.1| GTP-binding protein Era [Leptothrix cholodnii SP-6] gi|170774733|gb|ACB32872.1| GTP-binding protein Era [Leptothrix cholodnii SP-6] Length = 348 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 7/92 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI-IKN 219 I I+G PN GKST L ++ K I TT + GI G +F+ D PG ++ Sbjct: 59 IAIVGRPNVGKSTLLNTLIGQKVSITSRKAQTTRHRITGICTHGDTQFVFVDTPGFQTRH 118 Query: 220 AHQGAGIGDRFLKHTERT-----HVLLHIVSA 246 ++G +R L T ++ V+L +V A Sbjct: 119 TNRGTSALNRNLNKTVQSVLGDVDVVLFVVEA 150 >gi|163760113|ref|ZP_02167196.1| GTP-binding protein [Hoeflea phototrophica DFL-43] gi|162282512|gb|EDQ32800.1| GTP-binding protein [Hoeflea phototrophica DFL-43] Length = 413 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 11/164 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST VT A+ D F TL P L +K + IL+D G I + Sbjct: 175 VALVGYTNAGKSTLFNRVTGAEVLAEDMLFATLDPTLRRMKLPHGNTVILSDTVGFISSL 234 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEI 275 H A L+ ++LH+ + + + + IL L + RK +E+ Sbjct: 235 PTHLVAAFR-ATLEEVVEADLILHVRDMADPDRASQAGDVEEILKSLGLNEGDGRKLVEV 293 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 ++ID + + K + + SS+TG GI ++L Sbjct: 294 --WNKIDLLSEEAAEDLKTR--AEKSENAIAVSSVTGEGIDELL 333 >gi|114771148|ref|ZP_01448588.1| GTP-binding protein HflX [alpha proteobacterium HTCC2255] gi|114548430|gb|EAU51316.1| GTP-binding protein HflX [alpha proteobacterium HTCC2255] Length = 417 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 9/173 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 + ++G NAGKST +T AK D F TL P + V+ ++ IL+D G I Sbjct: 197 VALVGYTNAGKSTLFNYMTGAKVFAKDMLFATLDPTMREVELPSGQKIILSDTVGFISEL 256 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 Q L+ +++LH+ +S E QA IL+EL ++ +E+ Sbjct: 257 PTQLIAAFRATLEEVLDANLILHVRDISHPETEAQANDVNDILEELDVSDNTKSNILEV- 315 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSI 329 ++ D + +D L KN ++ + ++ S++TG G+ +L + + + I Sbjct: 316 -WNKTDLLSNDELINAKN-ISDRSEKIR-TVSALTGDGLSVLLSEIDENLKEI 365 >gi|318061175|ref|ZP_07979896.1| GTPase Era [Streptomyces sp. SA3_actG] gi|318081602|ref|ZP_07988917.1| GTPase Era [Streptomyces sp. SA3_actF] Length = 313 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 11/151 (7%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I ++ P TT + GIV + IL D PG+ K Sbjct: 20 VGRPNAGKSTLTNALVGQKVAITSNRPQTTRHTVRGIVHRPEAQLILVDTPGLHKPR--- 76 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ ++ + + I EL+ +++ ++ +++ Sbjct: 77 TLLGERLNDVVRATWAEVDVIGFCLPADQKIGPGDRFIAKELAG----IKRTPKVAIVTK 132 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEFSSIT 311 D VDS LA + + ++ FE++ I Sbjct: 133 TDLVDSKRLAEQLMAIDALGRELGFEWAEIV 163 >gi|213964461|ref|ZP_03392661.1| GTPase [Corynebacterium amycolatum SK46] gi|213952654|gb|EEB64036.1| GTPase [Corynebacterium amycolatum SK46] Length = 535 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 27/170 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + I+G NAGKS+ L ++T A + D F TL P K + I+ D G ++ Sbjct: 295 VAIVGYTNAGKSSLLNALTDAGVLVEDALFATLDPTTRRTKLRDGRTVIMTDTVGFVR-- 352 Query: 221 HQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI---- 273 H + + F L+ V++H+V ++ LD++ A N + + Sbjct: 353 HLPTQLIEAFRSTLEEVLEADVIMHVVD-------SSDPFPLDQIKAVNKVINEIAEEEK 405 Query: 274 -----EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 E++ ++++D D TLA +L Q F S+ TG GI ++ Sbjct: 406 AEIPPELLVVNKVDKADGITLA----QLRHQLDDAVF-VSARTGEGIGEL 450 >gi|150026443|ref|YP_001297269.1| GTP-binding protein HflX [Flavobacterium psychrophilum JIP02/86] gi|149772984|emb|CAL44468.1| GTP-binding protein HflX [Flavobacterium psychrophilum JIP02/86] Length = 413 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 20/144 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G N GKST + +V ++ + + F TL + V F+L+D G I+ Sbjct: 202 VALVGYTNVGKSTLMNAVGKSDVFVENKLFATLDTTVRKVVIKNLPFLLSDTVGFIRKL- 260 Query: 222 QGAGIGDRF---LKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKIE 274 + D F L +LLH+V E+++ A + +LD SA K Sbjct: 261 -PTQLVDSFKSTLDEVREADLLLHVVDISHQDFEDHIDAVNKILLDIKSA------DKPT 313 Query: 275 IVGLSQID-----TVDSDTLARKK 293 I+ ++ID T+D+D L ++ Sbjct: 314 IMVFNKIDAYKHLTIDADDLMTER 337 >gi|328874089|gb|EGG22455.1| hypothetical protein DFA_04581 [Dictyostelium fasciculatum] Length = 444 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 161 DIGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 ++ +IG PNAGKS+ + ++ K ++ TT +GI+ E + + D PGIIK+ Sbjct: 127 NVAVIGAPNAGKSSLVNTIIGEKICAVSSREHTTRDNIIGILTEDKTQLVFHDTPGIIKH 186 >gi|296863536|pdb|3KXL|A Chain A, Crystal Structure Of Ssgbp Mutation Variant G235s gi|296863537|pdb|3KXL|B Chain B, Crystal Structure Of Ssgbp Mutation Variant G235s Length = 364 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 22/183 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I IGI+G N+GK++ S+T K+ FTT+ P + ++ +L D I+ Sbjct: 179 IPSIGIVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMSPKRYAIPINNRKIMLVDTVSFIR 238 Query: 219 NAHQGAGIGDRF---LKHTERTHVLLHIVSA------LEENVQAAYQCILDELSAYNSEL 269 I D F L + + L+ ++ + L E +Q++++ IL E+ + Sbjct: 239 GI--PPQIVDAFFVTLSEAKYSDALILVIDSTFSENLLIETLQSSFE-ILREIGVSGKPI 295 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQI-LECLHDKI 326 +V L++ID ++ D KK +L + + + F I + + LE L DKI Sbjct: 296 -----LVTLNKIDKINGD--LYKKLDLVEKLSKELYSPIFDVIPISALKRTNLELLRDKI 348 Query: 327 FSI 329 + + Sbjct: 349 YQL 351 >gi|291518719|emb|CBK73940.1| ferrous iron transporter FeoB [Butyrivibrio fibrisolvens 16/4] Length = 797 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 14/154 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN+GK+T ++T + + ++P T+ G +K G+ + ++ D+PGI + Sbjct: 5 IALAGNPNSGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLK-GHDDVVITDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ER +L+I+ + LE N+ Q +EL + +V + Sbjct: 64 YTLEEVVARNYLINERPDAILNIIDGTNLERNLYLTTQL---------TELGIPV-VVAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITG 312 + +D V + +EL+ Q G + S++ G Sbjct: 114 NMMDIVRKNGDQIHIDELSRQLGCKVVDISALKG 147 >gi|317049132|ref|YP_004116780.1| ribosome-associated GTPase EngA [Pantoea sp. At-9b] gi|316950749|gb|ADU70224.1| ribosome-associated GTPase EngA [Pantoea sp. At-9b] Length = 496 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G + +EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGG- 59 Query: 217 IKNAHQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L +V A V A Q I + L + R+K Sbjct: 60 IDGTEEGVENRMAEQSLLAIEEADVVLFLVDA-RAGVMPADQQIANHLRS-----RQKAT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILEC 321 + ++ D +D + A + A G++ ++ G G+ +LE Sbjct: 114 FLVANKTDGLDPE--AAVLDFYALGLGEI-HAIAASHGRGVTSLLET 157 >gi|224824285|ref|ZP_03697393.1| GTP-binding proten HflX [Lutiella nitroferrum 2002] gi|224603704|gb|EEG09879.1| GTP-binding proten HflX [Lutiella nitroferrum 2002] Length = 462 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + ++G NAGKST + ++T ++ +A+ F TL + + E +++D G IKN Sbjct: 228 VSLVGYTNAGKSTLMRALTGSEVLVANKLFATLDTTVRALYPESVPRVLVSDTVGFIKNL 287 Query: 221 HQG-AGIGDRFLKHTERTHVLLHIVSA 246 G L+ +LLH++ A Sbjct: 288 PHGLVASFKSTLEEALDAALLLHVIDA 314 >gi|295838981|ref|ZP_06825914.1| GTP-binding protein Era [Streptomyces sp. SPB74] gi|197695534|gb|EDY42467.1| GTP-binding protein Era [Streptomyces sp. SPB74] Length = 316 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 11/151 (7%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I ++ P TT + GIV + IL D PG+ K Sbjct: 23 VGRPNAGKSTLTNALVGQKVAITSNRPQTTRHTVRGIVHRPEAQLILVDTPGLHKPR--- 79 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ ++ + + I EL+ +++ ++ +++ Sbjct: 80 TLLGERLNDVVRATWAEVDVIGFCLPADQKIGPGDRFIAKELAG----IKRTPKVAIVTK 135 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEFSSIT 311 D VDS LA + + ++ FE++ I Sbjct: 136 TDLVDSKRLAEQLMAIDALGRELGFEWAEIV 166 >gi|167041437|gb|ABZ06189.1| putative GTPase of unknown function [uncultured marine microorganism HF4000_006O13] Length = 332 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + +IG PN GKST + ++ K I P TT LGIV + + +L D PG++ Sbjct: 56 VAVIGRPNVGKSTLVNALVGEKVSIVTSKPQTTQINILGIVHLPHAQIMLVDTPGLL 112 >gi|89901081|ref|YP_523552.1| GTP-binding protein EngA [Rhodoferax ferrireducens T118] gi|122479081|sp|Q21W32|DER_RHOFD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|89345818|gb|ABD70021.1| Small GTP-binding protein domain [Rhodoferax ferrireducens T118] Length = 447 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 7/92 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +T+++ I AD+ T + G K+G EFI+ D G +A Sbjct: 5 VALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNAKQGKHEFIVIDTGGFEPDA 64 Query: 221 HQGAGIGDRFLKHTER----THVLLHIVSALE 248 GI K T + V++ +V A E Sbjct: 65 --AGGIFKEMAKQTTQAVAEADVVIFVVDARE 94 >gi|81246371|gb|ABB67079.1| putative GTP-binding factor [Shigella boydii Sb227] Length = 503 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 12 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 71 Query: 215 GIIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 72 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREK 124 Query: 273 IEIVGLSQIDTVDSD 287 + +++ D +D D Sbjct: 125 PTFLVVNKTDGLDPD 139 >gi|294637684|ref|ZP_06715962.1| ribosome-associated GTPase EngA [Edwardsiella tarda ATCC 23685] gi|291089160|gb|EFE21721.1| ribosome-associated GTPase EngA [Edwardsiella tarda ATCC 23685] Length = 496 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 10/134 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVNGHEFIIIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I + G + ++ L E ++L +V A + A DE A + R K Sbjct: 60 IDGSENGVETHMAEQSLLAIEEADIVLFLVDARSGLLPA------DEAIARHLRSRDKST 113 Query: 275 IVGLSQIDTVDSDT 288 + ++ D +D+D Sbjct: 114 FLVANKTDGIDADV 127 >gi|262304211|gb|ACY44698.1| GTP-binding protein [Armadillidium vulgare] Length = 280 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 6/72 (8%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + L H+ A E++ V+ I D L Sbjct: 35 VTDIAGLVKGASEGQGLGNAFLSHIKACDALFHLTRAFEDDDVTHVEGDVNPIRD-LEII 93 Query: 266 NSELR-KKIEIV 276 + ELR K IE + Sbjct: 94 SDELRLKDIEYI 105 >gi|253988787|ref|YP_003040143.1| GTP-binding protein Era [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780237|emb|CAQ83398.1| gtp-binding protein era [Photorhabdus asymbiotica] Length = 302 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 VAIVGRPNVGKSTLLNQLLGQKVSITSRKPQTTRHRIMGIHTEGTYQTIYVDTPGL 66 >gi|199582350|gb|ACH89846.1| putative GDP binding protein [Alpheus panamensis] Length = 218 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + L H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDALFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE--------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 DEL + E L K +E G ++ + DT+ R K+ L + V F Sbjct: 63 DELRLKDIEYINNVYDKLFKLVERGGDKKLKP-EYDTVCRVKSLLEEEKRHVRF 115 >gi|148827277|ref|YP_001292030.1| GTP-binding protein EngA [Haemophilus influenzae PittGG] gi|148718519|gb|ABQ99646.1| GTP-binding protein EngA [Haemophilus influenzae PittGG] Length = 504 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 37/162 (22%), Positives = 76/162 (46%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHIAGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L + ++L +V A +A ++ Y + + KI ++ Sbjct: 65 EEGVEEKMAEQSLLAIDEADIVLFLVDA-----RAGLTAADIGIANYLRQRQNKITVLVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G++ + ++ G G+ Q++E Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGEIE-QIAASQGRGVTQLME 158 >gi|220928031|ref|YP_002504940.1| GTP-binding protein Era [Clostridium cellulolyticum H10] gi|254783293|sp|B8I736|ERA_CLOCE RecName: Full=GTPase Era gi|219998359|gb|ACL74960.1| GTP-binding protein Era [Clostridium cellulolyticum H10] Length = 298 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + +IG PN GKST L ++T K I ++ P TT G++ + IL D PGI Sbjct: 8 VSVIGRPNVGKSTLLNTITGQKIAIMSNKPQTTRNTIRGVITNKECQLILIDTPGI 63 >gi|71276444|ref|ZP_00652720.1| Ferrous iron transport protein B:Small GTP-binding protein domain [Xylella fastidiosa Dixon] gi|71901551|ref|ZP_00683634.1| Ferrous iron transport protein B:Small GTP-binding protein domain [Xylella fastidiosa Ann-1] gi|170730994|ref|YP_001776427.1| ferrous iron transport protein B [Xylella fastidiosa M12] gi|71162760|gb|EAO12486.1| Ferrous iron transport protein B:Small GTP-binding protein domain [Xylella fastidiosa Dixon] gi|71728675|gb|EAO30823.1| Ferrous iron transport protein B:Small GTP-binding protein domain [Xylella fastidiosa Ann-1] gi|167965787|gb|ACA12797.1| ferrous iron transport protein B [Xylella fastidiosa M12] Length = 617 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 11/65 (16%) Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY------KEFIL 210 K + + ++G PN+GK+ +T ++ K+A+YP T+ KEGY +EF++ Sbjct: 3 KHVLRLALVGNPNSGKTALFNRLTGSRQKVANYPGVTVE-----RKEGYFRASSGREFVI 57 Query: 211 ADIPG 215 D+PG Sbjct: 58 LDLPG 62 >gi|307330989|ref|ZP_07610120.1| GTP-binding protein Era [Streptomyces violaceusniger Tu 4113] gi|306883375|gb|EFN14430.1| GTP-binding protein Era [Streptomyces violaceusniger Tu 4113] Length = 352 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 17/153 (11%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I ++ P TT + GIV + +L D PG+ K Sbjct: 59 VGRPNAGKSTLTNALVGTKVAITSNRPQTTRHTVRGIVHRPDAQLVLVDTPGLHKPR--- 115 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ ++ + + I EL+ ++K +I +++ Sbjct: 116 TLLGERLNDVVRTTWAEVDVIGFCLPADQKLGPGDRYIATELAG----IKKTPKIAIVTK 171 Query: 281 IDTVDSDTLARKK---NELATQCGQVPFEFSSI 310 D V+S LA + + L T+ G FE++ I Sbjct: 172 TDLVESKQLAEQLIAIDRLGTELG---FEWAEI 201 >gi|262170932|ref|ZP_06038610.1| ferrous iron transport protein B [Vibrio mimicus MB-451] gi|261892008|gb|EEY37994.1| ferrous iron transport protein B [Vibrio mimicus MB-451] Length = 758 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 17/172 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I +G PN+GK+T +T AK ++ ++ T+ G EF+L D+PGI + + Sbjct: 5 ILTVGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGSFTHAGDEFLLTDLPGIYALDS 64 Query: 220 AHQGAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + I + TH +++++V A LE ++ Q EL++ + Sbjct: 65 GNDTNSIDESIASRAVLTHPTDLIINVVDATCLERSLYMTLQL---------RELQRPM- 114 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 IV L+++D + + + +L + G S+ + + + E LH + Sbjct: 115 IVVLNKMDVLKRERVHVDIKQLESFLGCPVLALSANSKEQVRRFKEKLHKVV 166 >gi|260166743|gb|ACX32983.1| SD24341p [Drosophila melanogaster] Length = 362 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + H+ A E+ +V+ + D L Sbjct: 54 VVDIAGLVKGAAEGQGLGNDFLSHISACDAIFHLCRAFEDPDVTHVEGEVDPVRD-LEII 112 Query: 266 NSELRKKIEIVGLSQIDTVDS 286 + ELR K E L +D ++ Sbjct: 113 SEELRLKDEENLLKNLDKLEK 133 >gi|304316920|ref|YP_003852065.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778422|gb|ADL68981.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 278 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 15/92 (16%) Query: 164 IIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGYKEFILADIPGII----K 218 I+G+PN GKST + S+++ K K + P T ++ Y F L D PGI+ + Sbjct: 123 IVGIPNVGKSTLINSLSKTKSAKTGNKPGVTKAKQW--IRTPY--FDLLDTPGILWPKFE 178 Query: 219 NAHQG------AGIGDRFLKHTERTHVLLHIV 244 + H G A I D L H E LL I+ Sbjct: 179 DEHVGIMLALTAAIKDELLNHEELAFSLLKIL 210 >gi|148825596|ref|YP_001290349.1| GTP-binding protein EngA [Haemophilus influenzae PittEE] gi|229847254|ref|ZP_04467357.1| GTP-binding protein EngA [Haemophilus influenzae 7P49H1] gi|148715756|gb|ABQ97966.1| GTP-binding protein EngA [Haemophilus influenzae PittEE] gi|229809797|gb|EEP45520.1| GTP-binding protein EngA [Haemophilus influenzae 7P49H1] Length = 504 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 37/162 (22%), Positives = 76/162 (46%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHIAGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L + ++L +V A +A ++ Y + + KI ++ Sbjct: 65 EEGVEEKMAEQSLLAIDEADIVLFLVDA-----RAGLTAADIGIANYLRQRQNKITVLVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G++ + ++ G G+ Q++E Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGEIE-QIAASQGRGVTQLME 158 >gi|94497605|ref|ZP_01304174.1| GTP-binding protein Era [Sphingomonas sp. SKA58] gi|94423022|gb|EAT08054.1| GTP-binding protein Era [Sphingomonas sp. SKA58] Length = 302 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PNAGKST + ++ K I TT +G+ EG + +L D PGI Sbjct: 13 VAIVGAPNAGKSTLVNALVGQKVAITSPKAQTTRTRVMGVAIEGDAQIVLVDTPGI 68 >gi|16331223|ref|NP_441951.1| GTP-binding protein Era [Synechocystis sp. PCC 6803] gi|3334177|sp|Q55526|ERA_SYNY3 RecName: Full=GTPase Era gi|1001399|dbj|BAA10021.1| GTP-binding protein Era [Synechocystis sp. PCC 6803] Length = 315 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + + K I T L GI+ + IL D PGI K Sbjct: 25 VAIVGRPNVGKSTLMNQLVGQKIAITSPVAQTTRNRLQGIITTPSSQIILLDTPGIHKPH 84 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQAAY--QCILDELSAYNSELRKKIEIVG 277 H+ +G +K+ + H + +V ++ + + ++D L + + +VG Sbjct: 85 HE---LGRVLVKNAIQAIHSVDLVVFLVDSSATLGRGDRFVVDLLQKTDGPV-----VVG 136 Query: 278 LSQIDTVDSDT---LARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L++ D D L L G F+FS++TG G+ L ++ Sbjct: 137 LNKQDQQPPDQREELNASYETLTENHGWPCFKFSALTGEGLSNFQSALEARL 188 >gi|329297706|ref|ZP_08255042.1| GTPase Era [Plautia stali symbiont] Length = 300 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 IAIVGRPNVGKSTLLNQLLGQKVSITSRKPQTTRHRIMGIHTEGAYQAIYVDTPGL 66 >gi|291522706|emb|CBK80999.1| GTP-binding protein HflX [Coprococcus catus GD/7] Length = 419 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 2/115 (1%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII-KNA 220 I+G NAGKST L +T A D F TL P + + +E +L D G I K Sbjct: 205 AIVGYTNAGKSTLLNRLTGAGVLEEDKLFATLDPTTRNLTLDDGQELLLTDTVGFIHKLP 264 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 H L+ + +L+H+V A + + + L+A + + +K I + Sbjct: 265 HHLVDAFRSTLEEAKYADILIHMVDASNPQAEMHMHVVYETLAALDIKDKKIITV 319 >gi|156975791|ref|YP_001446698.1| GTP-binding protein Era [Vibrio harveyi ATCC BAA-1116] gi|156527385|gb|ABU72471.1| hypothetical protein VIBHAR_03535 [Vibrio harveyi ATCC BAA-1116] Length = 320 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +G+ EG + I D PG+ Sbjct: 29 IAIVGRPNVGKSTLLNKILGQKISITSRKPQTTRHRIMGVDTEGDYQAIYVDTPGL 84 >gi|78484970|ref|YP_390895.1| small GTP-binding protein domain-containing protein [Thiomicrospira crunogena XCL-2] gi|78363256|gb|ABB41221.1| GTP-binding protein [Thiomicrospira crunogena XCL-2] Length = 480 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 I ++G PN GKST +TR++ I ADYP T G + G +I+ D G+ Sbjct: 6 IALVGRPNVGKSTLFNRLTRSRDAIVADYPGLTRDRQYGTGRVGSTPYIVVDTGGL 61 >gi|85708673|ref|ZP_01039739.1| GTPase [Erythrobacter sp. NAP1] gi|85690207|gb|EAQ30210.1| GTPase [Erythrobacter sp. NAP1] Length = 432 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 20/130 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I ++G NAGKST +T A+ D F TL P + I G ++ IL+D G I + Sbjct: 204 IALVGYTNAGKSTLFNRLTGAEVMAEDLLFATLDPTMRAISLPGVEKAILSDTVGFISDL 263 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS--AYNSELRKKIEIVGL 278 T ++ + LEE A C + +++ A++++ ++ +E+ L Sbjct: 264 P---------------TQLVAAFRATLEEVTGADIICHVRDMANPAHSAQKKQVMEV--L 306 Query: 279 SQIDTVDSDT 288 S + VD+++ Sbjct: 307 SDLGVVDAES 316 >gi|34764123|ref|ZP_00144997.1| GTP binding protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886109|gb|EAA23411.1| GTP binding protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 298 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 8/165 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST + + K I T N+ GI+ ++I D PGI K Sbjct: 6 IAVVGRPNVGKSTLINKLVSEKVAIVSDKAGTTRDNIKGILNFKDNQYIFIDTPGIHKPQ 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H G + + +K + ++L ++ A + + ++D + N +KK +I+ ++ Sbjct: 66 HLLGEYMTNIAVKILKDVDIILFLIDA-SKPIGTGDMFVMDRI---NENAKKKPKILLVN 121 Query: 280 QIDTVDSDTLARKKNELATQCGQV-PFEFSS-ITGHGIPQILECL 322 ++D + + K E+ + G+ F+S + GI ++LE L Sbjct: 122 KVDLISDEQKEEKLKEIEEKLGEFNKIIFASGMYSFGISKLLEAL 166 >gi|319898104|ref|YP_004136301.1| gtp-binding protein [Haemophilus influenzae F3031] gi|309750447|gb|ADO80431.1| GTP-binding protein EngA [Haemophilus influenzae R2866] gi|317433610|emb|CBY81994.1| predicted GTP-binding protein [Haemophilus influenzae F3031] Length = 504 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHIAGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L + ++L +V A +A ++ Y + + K IV Sbjct: 65 EEGVEEKMAEQSLLAIDEADIVLFLVDA-----RAGLTAADIGIANYLRQRQNKTTIVVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G++ + ++ G G+ Q++E Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGEIE-QIAASQGRGVTQLME 158 >gi|302871791|ref|YP_003840427.1| GTP-binding protein Era [Caldicellulosiruptor obsidiansis OB47] gi|302574650|gb|ADL42441.1| GTP-binding protein Era [Caldicellulosiruptor obsidiansis OB47] Length = 300 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 20/167 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PN GKST L + K I+ P TT GI+ + I D PG+ Sbjct: 8 VALIGRPNVGKSTLLNYLVGKKISIISPKPQTTRNSIKGILTLEDAQIIFIDTPGVHPPK 67 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 ++ +G+ +K +E+T ++L+IV A++ + + I+++L + +I+ Sbjct: 68 NK---LGEYMVKVSEKTLKEVDLILYIVEAIDNGIGPWDEAIIEKLKDVETP-----KIL 119 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEF----SSITGHGIPQIL 319 L++ D + + K+ +T+ FEF ++I G+ +L Sbjct: 120 VLNKSDLASKENVEMLKSIFSTKLN---FEFIVDIAAINGYNCDLLL 163 >gi|199582348|gb|ACH89845.1| putative GDP binding protein [Alpheus panamensis] Length = 218 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + L H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDALFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE--------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 DEL + E L K +E G ++ + DT+ R K+ L + V F Sbjct: 63 DELRLKDIEYINNVYDKLFKLVERGGDKKLKP-EYDTVCRVKSLLEEEKRHVRF 115 >gi|145637903|ref|ZP_01793547.1| GTP-binding protein EngA [Haemophilus influenzae PittHH] gi|145268903|gb|EDK08862.1| GTP-binding protein EngA [Haemophilus influenzae PittHH] Length = 503 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHIAGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L + ++L +V A +A ++ Y + + K IV Sbjct: 65 EEGVEEKMAEQSLLAIDEADIVLFLVDA-----RAGLTAADIGIANYLRQRQNKTTIVVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G++ + ++ G G+ Q++E Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGEIE-QIAASQGRGVTQLME 158 >gi|62391126|ref|YP_226528.1| GTP-binding protein Era [Corynebacterium glutamicum ATCC 13032] gi|41326465|emb|CAF20627.1| BEX PROTEIN (GTP-BINDING PROTEIN ERA HOMOLOG) [Corynebacterium glutamicum ATCC 13032] Length = 332 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 16/171 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +G PN GKST ++ K I A+ P TT +P G+V + I+ D PG+ + Sbjct: 42 VSFVGRPNTGKSTLTNALVGEKIAITANQPETTRHPIRGLVHRDNAQIIVVDTPGLHR-- 99 Query: 221 HQGAGIGDRFLKHTERTHV---LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 +G+R + + T+ L+ E + + IL+ + ++ K I+G Sbjct: 100 -PRTLLGERLNEAVKDTYADVDLIGFTVPANEKIGPGDRWILEAV----RKVSPKTPILG 154 Query: 278 -LSQIDTVDSDTLARK---KNELATQCGQVPFEFSSITGHGIPQILECLHD 324 +++ D+V D +A + +EL +V SS +G + +++ + D Sbjct: 155 IITKADSVSRDLVAAQLMAVHELLGGNSEV-VPVSSTSGENVETLIKVMTD 204 >gi|120599801|ref|YP_964375.1| GTP-binding protein Era [Shewanella sp. W3-18-1] gi|120559894|gb|ABM25821.1| GTP-binding protein Era [Shewanella sp. W3-18-1] gi|319425562|gb|ADV53636.1| GTP-binding protein Era [Shewanella putrefaciens 200] Length = 338 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + IIG PN GKST L + K I + P TT + +GI +G K+ + D PG+ Sbjct: 47 VAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPKQIVFIDTPGL 102 >gi|324993803|gb|EGC25722.1| GTP-binding protein Era [Streptococcus sanguinis SK405] gi|324994878|gb|EGC26791.1| GTP-binding protein Era [Streptococcus sanguinis SK678] gi|327463077|gb|EGF09398.1| GTP-binding protein Era [Streptococcus sanguinis SK1] gi|327474678|gb|EGF20083.1| GTP-binding protein Era [Streptococcus sanguinis SK408] gi|327490236|gb|EGF22024.1| GTP-binding protein Era [Streptococcus sanguinis SK1058] Length = 299 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 19/173 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 +GD ++ T +L +V A +E I++ L A + I+ Sbjct: 66 -PKTALGDFMVEAAYSTLREVDTVLFMVPA-DEPRGKGDDMIIERLKAAKVPV-----IL 118 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + +++ L + + Sbjct: 119 VVNKIDKVHPDQLLAQIDDFRQQMDFKEIVP--ISALQGNNVSYLIDILSENL 169 >gi|212710611|ref|ZP_03318739.1| hypothetical protein PROVALCAL_01677 [Providencia alcalifaciens DSM 30120] gi|212686692|gb|EEB46220.1| hypothetical protein PROVALCAL_01677 [Providencia alcalifaciens DSM 30120] Length = 492 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + + L+ E V+L +V A + A DE A + RKK Sbjct: 60 IDGTEEGVETHMAAQSLQAIEEADVVLFMVDARAGLMPA------DEGIAKHLRSRKKKT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + ++ D +D++ + L G++ + ++ G G+ Q++E Sbjct: 114 YLVANKTDGIDANIVVGDFYSLG--LGEI-YPIAASHGRGVTQLIE 156 >gi|206889400|ref|YP_002249105.1| ferrous iron transport protein B [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741338|gb|ACI20395.1| ferrous iron transport protein B [Thermodesulfovibrio yellowstonii DSM 11347] Length = 636 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 31/55 (56%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 I IG PNAGKST + K A++P T++ + VK G + F + D+PGI Sbjct: 3 IAFIGQPNAGKSTIFNGLAGYKTVTANFPGQTVHYTVSKVKVGNETFEIVDLPGI 57 >gi|199582346|gb|ACH89844.1| putative GDP binding protein [Alpheus panamensis] gi|199582352|gb|ACH89847.1| putative GDP binding protein [Alpheus panamensis] Length = 218 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + L H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDALFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE--------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 DEL + E L K +E G ++ + DT+ R K+ L + V F Sbjct: 63 DELRLKDIEYINNVYDKLFKLVERGGDKKLKP-EYDTVCRVKSLLEEEKRHVRF 115 >gi|324328712|gb|ADY23972.1| ferrous iron transport protein B [Bacillus thuringiensis serovar finitimus YBT-020] Length = 662 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 17/167 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 4 VALLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--KQGTLIDLPGVYDLNP 61 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + G+ FL E H +L+IV S E N+ Q + E K + I G Sbjct: 62 VSRDEGVVTNFLLTEEFQH-MLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-G 110 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 L+ ID + L+ G + +G G ++L L + Sbjct: 111 LNMIDVAKQRGIVIDVKRLSELLGVTVVPVVARSGKGCEELLATLKE 157 >gi|319775992|ref|YP_004138480.1| GTP-binding protein [Haemophilus influenzae F3047] gi|329123858|ref|ZP_08252415.1| ribosome-associated GTPase EngA [Haemophilus aegyptius ATCC 11116] gi|317450583|emb|CBY86800.1| predicted GTP-binding protein [Haemophilus influenzae F3047] gi|327468821|gb|EGF14295.1| ribosome-associated GTPase EngA [Haemophilus aegyptius ATCC 11116] Length = 504 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHIAGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L + ++L +V A +A ++ Y + + K IV Sbjct: 65 EEGVEEKMAEQSLLAIDEADIVLFLVDA-----RAGLTAADIGIANYLRQRQNKTTIVVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G++ + ++ G G+ Q++E Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGEIE-QIAASQGRGVTQLME 158 >gi|308061844|gb|ADO03732.1| GTP-binding protein Era [Helicobacter pylori Cuz20] Length = 301 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 70/173 (40%), Gaps = 25/173 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYK-EFILADIPG 215 + +IG PNAGKST L ++ A + + + + KEGY+ + I D PG Sbjct: 8 VALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPG 67 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS--ELRKKI 273 + HQ + L L + E V A + D+L Y L +K Sbjct: 68 L---HHQEKLLNQCMLSQA------LKAMGDAELCVFLA--SVHDDLKGYEEFLSLCQKP 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECL 322 I+ +S+IDT + +K E Q VP S+ + +LEC+ Sbjct: 117 HILAVSKIDTATHKQVLQKLQEYQQHASQFLALVP--LSAKKSQNLNALLECI 167 >gi|237745211|ref|ZP_04575692.1| GTP binding protein [Fusobacterium sp. 7_1] gi|229432440|gb|EEO42652.1| GTP binding protein [Fusobacterium sp. 7_1] Length = 298 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 10/166 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST + + K I T N+ GI+ ++I D PGI K Sbjct: 6 IAVVGRPNVGKSTLINKLVSEKVAIVSDKAGTTRDNIKGILNFKDNQYIFIDTPGIHKPQ 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H G + + +K + ++L ++ A + + ++D + N +KK +I+ ++ Sbjct: 66 HLLGEYMTNIAVKILKDVDIILFLIDA-SKPIGTGDIFVMDRI---NENAKKKPKILLVN 121 Query: 280 QIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECL 322 ++D + + K E+ + G ++ F S + GI Q+LE L Sbjct: 122 KVDLISDEQKKEKLKEIEEKLGNFDKIIFA-SGMYSFGISQLLESL 166 >gi|242277593|ref|YP_002989722.1| small GTP-binding protein [Desulfovibrio salexigens DSM 2638] gi|242120487|gb|ACS78183.1| small GTP-binding protein [Desulfovibrio salexigens DSM 2638] Length = 844 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 15/144 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + + G NAGKST +T A +A+YP T+ +G +EG + + D+PG + + Sbjct: 15 VALAGQQNAGKSTTYNMITGANQHVANYPGVTVDKKVGSYREGKTRYEVVDLPGTYSLTS 74 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + FL E+ V+++++ A L ++ +Q + E+ + V Sbjct: 75 FSLEERVSREFLLE-EKPDVVVNVMDATCLRRSLYFTFQVL---------EMNFPVT-VA 123 Query: 278 LSQIDTVDSDTLARKKNELATQCG 301 L+ +D +S L EL + G Sbjct: 124 LNMMDVAESQGLTIDLKELTNRLG 147 >gi|254424384|ref|ZP_05038102.1| GTP-binding proten HflX, putative [Synechococcus sp. PCC 7335] gi|196191873|gb|EDX86837.1| GTP-binding proten HflX, putative [Synechococcus sp. PCC 7335] Length = 588 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 11/97 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV------KEGYKEFILAD 212 + + IIG NAGKST L +T ++ AD F TL P V + +L D Sbjct: 415 VPSVAIIGYTNAGKSTLLNHLTESEVYAADQLFATLDPTTRRVVINDEETHELQSLVLTD 474 Query: 213 IPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVSA 246 G I++ + D F L+ L+H+V A Sbjct: 475 TVGFIQDL--PPALMDAFRATLEEVTEADALIHVVDA 509 >gi|126668584|ref|ZP_01739538.1| GTP-binding protein EngA [Marinobacter sp. ELB17] gi|126626989|gb|EAZ97632.1| GTP-binding protein EngA [Marinobacter sp. ELB17] Length = 474 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST +TR++ +AD+P T G + FI+ D G++ + Sbjct: 5 IALVGRPNVGKSTLFNQMTRSRDALVADFPGLTRDRKYGEGNYENQRFIVIDTGGLMGDE 64 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 A + + L+ E ++L IV V Q + D+L ++ + ++ Sbjct: 65 LGLDAAMAKQSLQAVEEADIVLFIVDG-RAGVMPGDQVLADQLRRSGTQAH-----LVIN 118 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + D D + +A L Q F ++ G+ +LE L Sbjct: 119 KTDGQDPNLVASDFYALGFQS---QFRIAASHNRGVRSMLEIL 158 >gi|37525336|ref|NP_928680.1| GTP-binding protein EngA [Photorhabdus luminescens subsp. laumondii TTO1] gi|41017002|sp|Q7N702|DER_PHOLL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|36784763|emb|CAE13673.1| GTP-binding protein EngA [Photorhabdus luminescens subsp. laumondii TTO1] Length = 493 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 19/169 (11%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + +EFI+ D GI Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGQEFIIIDTGGI 60 Query: 217 IKN-----AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK 271 H A + L E ++L +V A + A I L R+ Sbjct: 61 DGTEDGVETHMAA----QSLLAIEEADIVLFMVDA-RAGLMPADHAIAKHLRG-----RE 110 Query: 272 KIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 K + ++ D VD DT + L G + + ++ G G+ Q++E Sbjct: 111 KATFLVANKTDGVDIDTAIAEFYSLG--LGDI-YSIAASHGRGVTQLIE 156 >gi|319794352|ref|YP_004155992.1| GTP-binding proten hflx [Variovorax paradoxus EPS] gi|315596815|gb|ADU37881.1| GTP-binding proten HflX [Variovorax paradoxus EPS] Length = 389 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 25/170 (14%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL---YPNLGIVKEGYKEFILADIPGII 217 +I ++G NAGKS+ ++ +A+ AD F TL NL + + ++ ++D G I Sbjct: 201 NISLVGYTNAGKSSLFNALVKARAYAADQLFATLDTTTRNL-YLGDAKRQVSISDTVGFI 259 Query: 218 KNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENV---QAAYQCILDELSAYNSELRK 271 ++ G+ D F L+ +LLH++ A + A Q +L E+ A Sbjct: 260 RDLPH--GLVDAFKATLQEAVDADLLLHVIDASNPHYPEQMAEVQSVLREIGADTVP--- 314 Query: 272 KIEIVGLSQIDTVDSDTLARK----KNELATQCGQVPFEF-SSITGHGIP 316 +++ +++D ++S A++ ++E+ QVP F S+ +G G+P Sbjct: 315 --QLLVFNKLDALES---AQRPLHLQDEMEIDGVQVPRIFLSAKSGEGVP 359 >gi|218297237|ref|ZP_03497893.1| GTP-binding protein Era [Thermus aquaticus Y51MC23] gi|218242430|gb|EED08970.1| GTP-binding protein Era [Thermus aquaticus Y51MC23] Length = 301 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + I+G PN GKST L ++ K I+ P TT GI+ EG ++ + D PG+ K Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHK 67 >gi|150003044|ref|YP_001297788.1| GTP-binding protein Era [Bacteroides vulgatus ATCC 8482] gi|254883682|ref|ZP_05256392.1| GTP-binding protein Era [Bacteroides sp. 4_3_47FAA] gi|294775668|ref|ZP_06741176.1| GTP-binding protein Era [Bacteroides vulgatus PC510] gi|319642180|ref|ZP_07996840.1| GTP-binding protein [Bacteroides sp. 3_1_40A] gi|149931468|gb|ABR38166.1| putative GTP-binding protein [Bacteroides vulgatus ATCC 8482] gi|254836475|gb|EET16784.1| GTP-binding protein Era [Bacteroides sp. 4_3_47FAA] gi|294450512|gb|EFG19004.1| GTP-binding protein Era [Bacteroides vulgatus PC510] gi|317386166|gb|EFV67085.1| GTP-binding protein [Bacteroides sp. 3_1_40A] Length = 293 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 31/163 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + + + IA + TT + +GI+ + + +D PG++K Sbjct: 7 VNIVGNPNVGKSTLMNLLVGERISIATFKSQTTRHRIMGILNTDDMQIVFSDTPGVVKPN 66 Query: 221 HQGAGIGDRFLKHTERTHV----LLHIVSALEE------------NVQAAYQCILDELSA 264 ++ + + L +E V LL++ +E+ NV+ +++++ Sbjct: 67 YK---LQESMLNFSESALVDADILLYVTDVVEKTDKNADFIEKVRNVKVPVLLLINKIDL 123 Query: 265 YNSELRKKI-----------EIVGLSQIDTVDSDTLARKKNEL 296 N E K+ EI+ +S + DT+ ++ EL Sbjct: 124 TNQEDLVKLVEAWHEQLPQAEIIPISATSKFNVDTVMKRIKEL 166 >gi|332992354|gb|AEF02409.1| GTPase Era [Alteromonas sp. SN2] Length = 303 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + LGI EG + I D PG+ Sbjct: 13 VAIVGRPNVGKSTLLNRLLGQKVSITSRKPQTTRHRILGIDTEGDYQAIYVDTPGL 68 >gi|258621155|ref|ZP_05716189.1| ferrous iron transport protein B [Vibrio mimicus VM573] gi|258586543|gb|EEW11258.1| ferrous iron transport protein B [Vibrio mimicus VM573] Length = 758 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 17/169 (10%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T +T AK ++ ++ T+ G EF+L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGSFTHAGDEFLLTDLPGIYALDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 I + TH +++++V A LE ++ Q EL++ + IV Sbjct: 68 TNSIDESIASRAVLTHPTDLIINVVDATCLERSLYMTLQL---------RELQRPM-IVV 117 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L+++D + + + +L + G S+ + + + E LH + Sbjct: 118 LNKMDVLKRERVHVDIKQLESFLGCPVLALSANSKEQVRRFKEKLHKVV 166 >gi|237708021|ref|ZP_04538502.1| GTP-binding protein Era [Bacteroides sp. 9_1_42FAA] gi|237725293|ref|ZP_04555774.1| GTP-binding protein Era [Bacteroides sp. D4] gi|265754192|ref|ZP_06089381.1| GTP-binding protein Era [Bacteroides sp. 3_1_33FAA] gi|229436559|gb|EEO46636.1| GTP-binding protein Era [Bacteroides dorei 5_1_36/D4] gi|229458007|gb|EEO63728.1| GTP-binding protein Era [Bacteroides sp. 9_1_42FAA] gi|263234901|gb|EEZ20456.1| GTP-binding protein Era [Bacteroides sp. 3_1_33FAA] Length = 293 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 31/163 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + + + IA + TT + +GI+ + + +D PG++K Sbjct: 7 VNIVGNPNVGKSTLMNLLVGERISIATFKSQTTRHRIMGILNTDDMQIVFSDTPGVVKPN 66 Query: 221 HQGAGIGDRFLKHTERTHV----LLHIVSALEE------------NVQAAYQCILDELSA 264 ++ + + L +E V LL++ +E+ NV+ +++++ Sbjct: 67 YK---LQESMLNFSESALVDADILLYVTDVVEKTDKNADFIEKVRNVKVPVLLLINKIDL 123 Query: 265 YNSELRKKI-----------EIVGLSQIDTVDSDTLARKKNEL 296 N E K+ EI+ +S + DT+ ++ EL Sbjct: 124 TNQEDLVKLVEAWHEQLPQAEIIPISATSKFNVDTVMKRIREL 166 >gi|84390105|ref|ZP_00991367.1| GTP-binding protein Era [Vibrio splendidus 12B01] gi|86146358|ref|ZP_01064682.1| GTP-binding protein Era [Vibrio sp. MED222] gi|218710568|ref|YP_002418189.1| GTP-binding protein Era [Vibrio splendidus LGP32] gi|84376759|gb|EAP93634.1| GTP-binding protein Era [Vibrio splendidus 12B01] gi|85835837|gb|EAQ53971.1| GTP-binding protein Era [Vibrio sp. MED222] gi|218323587|emb|CAV19827.1| GTP-binding protein era homolog [Vibrio splendidus LGP32] Length = 323 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +G+ EG + I D PG+ Sbjct: 32 IAIVGRPNVGKSTLLNHILGQKISITSRKPQTTRHRIMGVETEGDYQAIYVDTPGL 87 >gi|302347895|ref|YP_003815533.1| Predicted GTPase [Acidilobus saccharovorans 345-15] gi|302328307|gb|ADL18502.1| Predicted GTPase [Acidilobus saccharovorans 345-15] Length = 349 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 7/111 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G PN+GKS+ +A +T AK ++ P+TT P G++ + L D P ++ + Sbjct: 50 VVLLGPPNSGKSSIVARLTNAKVTVSPIPYTTQLPVPGMMTYLDVKLQLVDTPPLL---N 106 Query: 222 QGAGIGDRFLKHTERTHVLLHIV----SALEENVQAAYQCILDELSAYNSE 268 + R + V+ ++ +++ A+ + I D AY+ E Sbjct: 107 PDGSVNSRVVALARNADVIAVVIGLDSPEPTKDLTASLEAIEDRGIAYSLE 157 >gi|290476133|ref|YP_003469033.1| GTPase believed to be involved in coordination of cell cycle, energy metabolism, cell division [Xenorhabdus bovienii SS-2004] gi|289175466|emb|CBJ82269.1| GTPase believed to be involved in coordination of cell cycle, energy metabolism, cell division [Xenorhabdus bovienii SS-2004] Length = 301 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 VAIVGRPNVGKSTLLNQLLGQKISITSRKPQTTRHRIMGIHTEGVYQAIYVDTPGL 66 >gi|288801361|ref|ZP_06406815.1| GTP-binding protein Era [Prevotella sp. oral taxon 299 str. F0039] gi|288331744|gb|EFC70228.1| GTP-binding protein Era [Prevotella sp. oral taxon 299 str. F0039] Length = 293 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 24/173 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + + K IA + TT + +GIV + + +D PG++K Sbjct: 7 VNIVGNPNVGKSTLMNLLVGEKISIATFKAQTTRHRIMGIVNTEDMQIVFSDTPGVLKPN 66 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE------ 274 ++ + + L +E SAL + Y + E N E +K++ Sbjct: 67 YR---LQESMLAFSE---------SALTDADILLYVTDVIENPEKNIEFLEKVQHLDIPI 114 Query: 275 IVGLSQIDTVDSDT---LARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 I+ +++ID D T L K + L + +P S++ G+ +L + D Sbjct: 115 ILLINKIDMSDQKTLGSLVEKWHSLLPKAEILP--LSALNKFGVDILLNRIKD 165 >gi|284006778|emb|CBA72042.1| GTP-binding protein [Arsenophonus nasoniae] Length = 493 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I I ++G PN GKST +TR + +AD+P T G + +EFI+ D GI Sbjct: 1 MIPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGKAEFAGQEFIIIDTGGI 60 >gi|285019300|ref|YP_003377011.1| GTP-binding protein era [Xanthomonas albilineans GPE PC73] gi|283474518|emb|CBA17019.1| probable gtp-binding protein era [Xanthomonas albilineans] Length = 299 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + +IG PN GKST ++ AK I ++ P TT + LGI + +L D PG+ Sbjct: 13 VAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIASFPAGQLLLVDTPGL 68 >gi|262304235|gb|ACY44710.1| GTP-binding protein [Eremocosta gigasella] Length = 280 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 3/83 (3%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---ELSAYN 266 + DI G++K A +G G+G+ FL H + + H+ E++ + +D ++ N Sbjct: 35 VVDIAGLVKGASEGQGLGNAFLSHIKACDAIFHLCRVFEDDNVTHIEGDVDPVRDIEIIN 94 Query: 267 SELRKKIEIVGLSQIDTVDSDTL 289 ELR K E + ID ++ L Sbjct: 95 EELRLKDEEYLEAVIDKMERTVL 117 >gi|290956958|ref|YP_003488140.1| GTP-ase [Streptomyces scabiei 87.22] gi|260646484|emb|CBG69581.1| putative GTP-ase [Streptomyces scabiei 87.22] Length = 498 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 21/176 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I G NAGKS+ L +T A + + F TL P + + + + LAD G + Sbjct: 275 VPSVAIAGYTNAGKSSLLNRLTGAGVLVENALFATLDPTVRRAETPSGRLYTLADTVGFV 334 Query: 218 KNAHQGAGIGDRFLKHTERT---HVLLHIVS----ALEENVQAAYQCILDELSAYNSELR 270 + H + + F E ++LH+V A EE + A + I D + Sbjct: 335 R--HLPHHLVEAFRSTMEEVGDADLILHVVDGSHPAPEEQLAAVREVIRDVGAT------ 386 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 K EIV +++ D D TL R + + S+ +G GI ++L + +++ Sbjct: 387 KVPEIVVINKADAADPLTLQR-----LLRVEKRSIAVSARSGQGIQELLALIDNEL 437 >gi|156932946|ref|YP_001436862.1| GTP-binding protein EngA [Cronobacter sakazakii ATCC BAA-894] gi|166198713|sp|A7MGU7|DER_ENTS8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|156531200|gb|ABU76026.1| hypothetical protein ESA_00749 [Cronobacter sakazakii ATCC BAA-894] Length = 492 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 10/133 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + +EFI D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I + +G + ++ L E V+L +V A + A DE A + R+K Sbjct: 60 IDGSEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSRQKPT 113 Query: 275 IVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 114 FLVANKTDGLDPD 126 >gi|311267971|ref|XP_003131840.1| PREDICTED: GTP-binding protein era homolog [Sus scrofa] Length = 588 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + + I+G PNAGKST + R ++ TT LG++ E + IL D PG+I Sbjct: 264 VLRVVILGAPNAGKSTLSNKLLGRKVFPVSKKVHTTRSQALGVITEKEAQVILLDTPGLI 323 Query: 218 KNAHQ 222 A Q Sbjct: 324 SPAKQ 328 >gi|293394830|ref|ZP_06639120.1| GTP-binding protein Era [Serratia odorifera DSM 4582] gi|291422581|gb|EFE95820.1| GTP-binding protein Era [Serratia odorifera DSM 4582] Length = 302 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 IAIVGRPNVGKSTLLNQLLGQKVSITSRKPQTTRHRIMGIHTEGPYQAIYVDTPGL 66 >gi|288801362|ref|ZP_06406816.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 299 str. F0039] gi|288331745|gb|EFC70229.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 299 str. F0039] Length = 437 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST +T+ + I +D TT G V +EF + D G + N+ Sbjct: 5 VAIVGRPNVGKSTLFNRLTKTRSAIVSDTAGTTRDRQYGKVDWNGREFSIVDTGGWVVNS 64 Query: 221 HQ--GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 I + L TE +++L +V Q L + +++ +K ++ + Sbjct: 65 EDIFEDAIRRQVLIATEEANLVLFVVDV---------QTGLTDWDEDVAQILRKSKVPII 115 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ VD + E + PF SS TG G +L+ Sbjct: 116 LVVNKVDKNEQQYDAAEFYSLGLGEPFCISSSTGSGTGDLLD 157 >gi|117923594|ref|YP_864211.1| GTP-binding protein, HSR1-related [Magnetococcus sp. MC-1] gi|117607350|gb|ABK42805.1| GTP-binding protein, HSR1-related protein [Magnetococcus sp. MC-1] Length = 432 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 4/86 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKN 219 + ++G NAGKST +TRA D F TL P + V +G + +L+D G I+ Sbjct: 204 VALVGYTNAGKSTLFNLLTRAGVLAEDKLFATLDPTMRAVDLPDGGR-ILLSDTVGFIRQ 262 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIV 244 HQ L+ +LLH+V Sbjct: 263 LPHQLVAAFKATLEEVMSADMLLHVV 288 >gi|331091498|ref|ZP_08340336.1| ferrous iron transporter B [Lachnospiraceae bacterium 2_1_46FAA] gi|330404054|gb|EGG83604.1| ferrous iron transporter B [Lachnospiraceae bacterium 2_1_46FAA] Length = 680 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 30/58 (51%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + +G IG PN GK+T + T A K+A++P T+ G F L D+PGI Sbjct: 4 VIKVGFIGNPNCGKTTLFNAFTGANLKVANWPGVTVEKKEGTTTYKGDTFKLIDLPGI 61 >gi|237807624|ref|YP_002892064.1| GTP-binding protein Era [Tolumonas auensis DSM 9187] gi|237499885|gb|ACQ92478.1| GTP-binding protein Era [Tolumonas auensis DSM 9187] Length = 300 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + LGI +G + I D PG+ Sbjct: 11 VAIVGRPNVGKSTLLNKLLGQKVSITSRKPQTTRHRILGIDTQGAYQTIFVDTPGL 66 >gi|84501097|ref|ZP_00999332.1| GTP-binding protein HflX [Oceanicola batsensis HTCC2597] gi|84391164|gb|EAQ03582.1| GTP-binding protein HflX [Oceanicola batsensis HTCC2597] Length = 424 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 21/172 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKN 219 + ++G NAGKST +T A+ D F TL P + V+ E IL+D G I + Sbjct: 206 VALVGYTNAGKSTLFNRLTGAEVLAKDMLFATLDPTMRRVRLPNNGPEVILSDTVGFISD 265 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHI--VSALE-ENVQAAYQCILDELSAYNSELRKKIEI 275 Q L+ ++LHI +S E E +A + IL +L L +++ + Sbjct: 266 LPTQLVAAFRATLEEVLEADLILHIRDISHPEAEEQKADVEDILSDLG-----LPEEVPV 320 Query: 276 VGL-SQIDTV---DSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 + + +++D + D+ LAR+ T F S++TG G+ +L+ + Sbjct: 321 LEVWNKVDRLPPEDAGALARRAERDGT------FVISAVTGAGLDPLLDAVE 366 >gi|125973918|ref|YP_001037828.1| GTP-binding protein, HSR1-related [Clostridium thermocellum ATCC 27405] gi|125714143|gb|ABN52635.1| GTP-binding protein, HSR1-related protein [Clostridium thermocellum ATCC 27405] Length = 716 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 13/166 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG---IIK 218 I + G PN GKST S+T ++P T+ G K K FI+ DIPG ++ Sbjct: 29 IALAGNPNVGKSTVFNSLTGLNQHTGNWPGKTVTNAQGRYKHKDKNFIMVDIPGTYSLMA 88 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 N+ + D V++ + LE N+ Q + E+ K+ +V + Sbjct: 89 NSVEEEVARDFVCFGQPDATVVVTDATCLERNLNLVLQTL---------EITNKV-VVCV 138 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 + ID + + N+L+ G ++ + G+ ++++ +++ Sbjct: 139 NLIDEAERKKIKIDYNKLSKHLGVPVIPTNARSNKGLDKLMDAVYE 184 >gi|83311830|ref|YP_422094.1| Fe2+ transport system protein B [Magnetospirillum magneticum AMB-1] gi|82946671|dbj|BAE51535.1| Fe2+ transport system protein B [Magnetospirillum magneticum AMB-1] Length = 758 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 30/158 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI----- 216 + ++G PN GK+T +T + ++ ++P T+ +G +E+ L D+PGI Sbjct: 5 VAVVGNPNCGKTTLFNVLTGSTQQVGNWPGVTVEKKVGTYLRDGQEYDLVDLPGIYMIGG 64 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 I + + ++ E V+++IV A LE N+ L+A E+R + Sbjct: 65 IAKGSEDERVSRDYILSGE-PEVVVNIVDAYNLERNLY---------LTAQLLEMRVPL- 113 Query: 275 IVGLSQIDT-------VDSDTLARKKNELATQCGQVPF 305 +V ++ +D +D + L+R A C VP Sbjct: 114 VVAVNMMDLAEKSGIHIDVEALSR-----ALDCPVVPL 146 >gi|134300318|ref|YP_001113814.1| GTP-binding protein Era [Desulfotomaculum reducens MI-1] gi|134053018|gb|ABO50989.1| GTP-binding protein Era [Desulfotomaculum reducens MI-1] Length = 302 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 2/89 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST L + K I +D P TT + ++ + + D PGI K Sbjct: 13 VALVGRPNVGKSTLLNKLVGQKVAIMSDKPQTTRHKIHSVLTRNDAQMVFLDTPGIHKPR 72 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALE 248 H+ G + D L + V L +V A E Sbjct: 73 HKLGEYMVDVALGALKEVDVALFLVEASE 101 >gi|238765199|ref|ZP_04626130.1| Ferrous iron transport protein B [Yersinia kristensenii ATCC 33638] gi|238696582|gb|EEP89368.1| Ferrous iron transport protein B [Yersinia kristensenii ATCC 33638] Length = 782 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 17/164 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 IG+IG PNAGK+T +T A+ ++ ++ T+ G + L D+PG + Sbjct: 16 IGLIGNPNAGKTTLFNQLTGARQRVGNWAGVTVERKEGHFSTTQHQVTLVDLPGTYSLTT 75 Query: 220 AHQGAGIGDRFLKH---TERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + + ++ H + +L+++V A LE N+ Q I EL Sbjct: 76 ISEQTSLDEQIACHYILSGEADLLINVVDAANLERNLYLTLQLI---------ELGIPC- 125 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 IV L+ +D S + L+ Q G S G GI ++ Sbjct: 126 IVALNMLDIAKSQHIDIDIAALSQQLGCPVIPLISTRGQGINEL 169 >gi|291302023|ref|YP_003513301.1| GTP-binding proten HflX [Stackebrandtia nassauensis DSM 44728] gi|290571243|gb|ADD44208.1| GTP-binding proten HflX [Stackebrandtia nassauensis DSM 44728] Length = 466 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 9/170 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I G NAGKS+ L +T A + D F TL P + G +++ L+D G + Sbjct: 244 VPSVAIAGYTNAGKSSLLNRLTGAGVLVEDALFATLDPTTRRARTGDGRDYTLSDTVGFV 303 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + HQ L+ +++H++ + A + + + L+ ++ ++ +V Sbjct: 304 SHLPHQLVDAFRSTLEEVADADLIVHVIDGSHPDPGAQVRAVREVLNDVGADAVPEVLVV 363 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID S+ L L T F S+ TG G+ ++ + + +++ Sbjct: 364 --NKIDRAGSEALL----TLRTDWPDAVF-VSAHTGEGVDKLRDVIEERL 406 >gi|227502935|ref|ZP_03932984.1| possible ferrous iron transport protein [Corynebacterium accolens ATCC 49725] gi|227076357|gb|EEI14320.1| possible ferrous iron transport protein [Corynebacterium accolens ATCC 49725] Length = 210 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 33/54 (61%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 + ++G PN+GKST ++T AK + ++P T++ + G+ + F + D+PG Sbjct: 11 LALVGAPNSGKSTLFNALTGAKVQTGNWPGTSVEVSRGLWNAQPEAFDIIDLPG 64 >gi|325066682|ref|ZP_08125355.1| ferrous iron transport protein B [Actinomyces oris K20] Length = 709 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 30/54 (55%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 + + G PNAGK++ ++T K +YP T+ ++G K G K + D+PG Sbjct: 43 VALAGAPNAGKTSIYNALTGLHAKTGNYPGVTVQRSMGTCKVGGKTLTIEDLPG 96 >gi|300744003|ref|ZP_07073023.1| GTP-binding protein [Rothia dentocariosa M567] gi|300380364|gb|EFJ76927.1| GTP-binding protein [Rothia dentocariosa M567] Length = 593 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 15/184 (8%) Query: 148 QEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE---- 203 + K + K + + I G NAGKS+ L +T A + + F TL P + + Sbjct: 336 ETKRLSRKRNRVPSVAIAGYTNAGKSSLLNRLTDAGVLVENALFATLDPTVRKAQTPDGI 395 Query: 204 GYKEFILADIPGIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 GY L+D G +++ Q L+ V+LH+V A + + + + + + Sbjct: 396 GY---TLSDTVGFVRSLPTQLVEAFRSTLEEVADADVILHVVDASHPDPEGQVRAVREVI 452 Query: 263 SAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + ++ R+ EI+ L++ D D L R + S+ TG GI ++ + + Sbjct: 453 ADLDA--RRIPEIIVLNKADAADPFILERMRQREPNHVI-----VSARTGEGIGELKQKI 505 Query: 323 HDKI 326 D I Sbjct: 506 ADTI 509 >gi|242239500|ref|YP_002987681.1| ferrous iron transporter B [Dickeya dadantii Ech703] gi|242131557|gb|ACS85859.1| ferrous iron transport protein B [Dickeya dadantii Ech703] Length = 774 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I ++G PN GK+T +T K + ++P T+ +G + ++ +L D+PG+ N Sbjct: 7 ICVVGNPNCGKTTLFNVLTGGKQTVGNWPGVTVEKKVGTYRYQQQQVMLVDLPGVYSLNP 66 Query: 221 HQGAGIGDRFLKH---TERTHVLLHIVSA--LEENVQAAYQCI 258 + +R + + +++L+IV A LE N+ Q + Sbjct: 67 SSESSEDERVARDYILSGEANLVLNIVDASNLERNLYLTSQLL 109 >gi|157374288|ref|YP_001472888.1| GTP-binding protein Era [Shewanella sediminis HAW-EB3] gi|157316662|gb|ABV35760.1| GTP-binding protein Era [Shewanella sediminis HAW-EB3] Length = 335 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I + P TT + +GI +G ++ + D PG+ Sbjct: 44 VAIVGRPNVGKSTLLNKLLGQKISITSKKPQTTRHRIMGIHTDGARQVVFIDTPGL 99 >gi|109947438|ref|YP_664666.1| GTP-binding protein Era [Helicobacter acinonychis str. Sheeba] gi|123066224|sp|Q17XF9|ERA_HELAH RecName: Full=GTPase Era gi|109714659|emb|CAJ99667.1| GTP-binding protein [Helicobacter acinonychis str. Sheeba] Length = 301 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 25/177 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYK-EFILADIPG 215 + +IG PNAGKST L ++ A + + + + KEGY+ + I D PG Sbjct: 8 VALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPG 67 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS--ELRKKI 273 + HQ ++ L + L + A + + D+L Y L +K Sbjct: 68 L---HHQ-----EKLLNQCMLSQALKAMGDA---ELCVFLASVHDDLKGYEEFLNLCQKP 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECLHDKI 326 I+ LS+IDT + +K E Q +P S+ + +LEC+ + + Sbjct: 117 HILALSKIDTATHKQVLQKLQEYQQYASQFLSLIP--LSAKKSQNLNALLECISEHL 171 >gi|46200176|ref|YP_005843.1| GTP-binding protein Era [Thermus thermophilus HB27] gi|55980089|ref|YP_143386.1| GTP-binding protein Era [Thermus thermophilus HB8] gi|81364712|sp|Q5SM23|ERA_THET8 RecName: Full=GTPase Era gi|56966801|pdb|1WF3|A Chain A, Crystal Structure Of Gtp-Binding Protein Tt1341 From Thermus Thermophilus Hb8 gi|46197804|gb|AAS82216.1| GTP-binding protein era [Thermus thermophilus HB27] gi|55771502|dbj|BAD69943.1| GTP-binding protein Era [Thermus thermophilus HB8] Length = 301 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + I+G PN GKST L ++ K I+ P TT GI+ EG ++ + D PG+ K Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHK 67 >gi|21230731|ref|NP_636648.1| GTP-binding protein Era [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769273|ref|YP_244035.1| GTP-binding protein Era [Xanthomonas campestris pv. campestris str. 8004] gi|188992424|ref|YP_001904434.1| GTP-binding protein Era [Xanthomonas campestris pv. campestris str. B100] gi|25008429|sp|Q8PB51|ERA_XANCP RecName: Full=GTPase Era gi|81304768|sp|Q4USF8|ERA_XANC8 RecName: Full=GTPase Era gi|226741404|sp|B0RX26|ERA_XANCB RecName: Full=GTPase Era gi|21112324|gb|AAM40572.1| GTP binding protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574605|gb|AAY50015.1| GTP binding protein [Xanthomonas campestris pv. campestris str. 8004] gi|167734184|emb|CAP52392.1| GTP-binding protein [Xanthomonas campestris pv. campestris] Length = 298 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + +IG PN GKST ++ AK I ++ P TT + LGI + +L D PG+ Sbjct: 12 VAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATFPEGQLMLVDTPGL 67 >gi|303232874|ref|ZP_07319558.1| ferrous iron transport protein B [Atopobium vaginae PB189-T1-4] gi|302481064|gb|EFL44140.1| ferrous iron transport protein B [Atopobium vaginae PB189-T1-4] Length = 925 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 IG+ G PN GK+T +T + + ++P T+ N K K+ D+PGI + Sbjct: 35 IGLAGNPNCGKTTLFNELTGSNGYVGNWPGVTVEKNQAPYKRN-KKVTFVDLPGIYSLSP 93 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ H ++++V A LE ++ + Q +L+ A ++GL Sbjct: 94 YSPEEVVSRDYIIDEQPHAIINLVDATNLERSLYLSTQ-VLETGCAV---------VIGL 143 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + D + EL+ + G + S++ G I ++++ Sbjct: 144 NMTDLLKERGDVIDTVELSKRLGAPVVQVSALRGTNISELVD 185 >gi|299135101|ref|ZP_07028292.1| GTP-binding protein Era [Afipia sp. 1NLS2] gi|298590078|gb|EFI50282.1| GTP-binding protein Era [Afipia sp. 1NLS2] Length = 306 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 33/180 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGI---- 216 + +IG PN GKST + ++ +K I T + GIV E + +L D PGI Sbjct: 16 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEDNAQIVLVDTPGIFTPK 75 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 + A GA D VLL + L+E A + + E Sbjct: 76 RRLDRAMVSTAWSGAHDADMVC-------VLLDARAGLDEEADAIFAKL---------EA 119 Query: 270 RKKIEIVGLSQIDTVDSD---TLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 K + + +++ID V + LA+K NE + F ++I+G G+ + L + + Sbjct: 120 VKHPKFLVINKIDLVAREKLLALAQKANERI--AFKQTFMIAAISGDGVDDLRRALAEAM 177 >gi|297708652|ref|XP_002831075.1| PREDICTED: developmentally-regulated GTP-binding protein 1-like, partial [Pongo abelii] Length = 114 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 27/43 (62%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK 202 A IG +G P+ GKST L+++ ++A Y FTTL G+++ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIR 107 >gi|328954426|ref|YP_004371760.1| GTP-binding protein Era-like-protein [Desulfobacca acetoxidans DSM 11109] gi|328454750|gb|AEB10579.1| GTP-binding protein Era-like-protein [Desulfobacca acetoxidans DSM 11109] Length = 306 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 14/159 (8%) Query: 166 GLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGII-KNAHQG 223 G+PN GKST L + K I + P TT + LGIV + + D+PGII + Sbjct: 22 GVPNVGKSTLLNRLVAEKLAITSPKPQTTRHRLLGIVHLPRAQLLFMDMPGIIDPGSLLN 81 Query: 224 AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDT 283 + + L + V++ +V+ + A + IL + L K ++ +++IDT Sbjct: 82 ESLVNTALGTLKDADVVVWLVTP--QETAAESRVILPHI-----RLLAKPVVIAINKIDT 134 Query: 284 V---DSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL 319 + + L + L + P +++TG G+P +L Sbjct: 135 IPKLEILPLIEFYHSLLPEAPVTP--VAALTGDGLPHLL 171 >gi|239928532|ref|ZP_04685485.1| ATP/GTP-binding protein [Streptomyces ghanaensis ATCC 14672] gi|291436858|ref|ZP_06576248.1| ATP/GTP-binding protein [Streptomyces ghanaensis ATCC 14672] gi|291339753|gb|EFE66709.1| ATP/GTP-binding protein [Streptomyces ghanaensis ATCC 14672] Length = 601 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 23/174 (13%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADI 213 K + + I G NAGKS+ L +T A + + F TL P + + + + LAD Sbjct: 270 KRNKVPSVAIAGYTNAGKSSLLNRLTGAGVLVENALFATLDPTVRRAETPSGRLYTLADT 329 Query: 214 PGIIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSEL 269 G +++ H ++ + ++LH+V N + AA + ++ ++ A + Sbjct: 330 VGFVRHLPHHLVEAFRSTMEEVGDSDLILHVVDGSHPNPEEQLAAVREVIRDVGATDVP- 388 Query: 270 RKKIEIVGLSQIDTVDSDTLAR----KKNELATQCGQVPFEFSSITGHGIPQIL 319 EIV +++ D D TL R +K LA S+ TG I Q+L Sbjct: 389 ----EIVVINKADAADPLTLQRLLRVEKRSLA---------VSARTGQNIEQLL 429 >gi|212690522|ref|ZP_03298650.1| hypothetical protein BACDOR_00004 [Bacteroides dorei DSM 17855] gi|212666871|gb|EEB27443.1| hypothetical protein BACDOR_00004 [Bacteroides dorei DSM 17855] Length = 293 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 31/163 (19%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + + + IA + TT + +GI+ + + +D PG++K Sbjct: 7 VNIVGNPNVGKSTLMNLLVGERISIATFKSQTTRHRIMGILNTDDMQIVFSDTPGVVKPN 66 Query: 221 HQGAGIGDRFLKHTERTHV----LLHIVSALEE------------NVQAAYQCILDELSA 264 ++ + + L +E V LL++ +E+ NV+ +++++ Sbjct: 67 YK---LQESMLNFSESALVDADILLYVTDVVEKTDKNVDFIEKVRNVKVPVLLLINKIDL 123 Query: 265 YNSELRKKI-----------EIVGLSQIDTVDSDTLARKKNEL 296 N E K+ EI+ +S + DT+ ++ EL Sbjct: 124 TNQEDLVKLVEAWHEQLPQAEIIPISATSKFNVDTVMKRIREL 166 >gi|149910154|ref|ZP_01898800.1| GTP-binding protein-like protein; GTPase [Moritella sp. PE36] gi|149806740|gb|EDM66704.1| GTP-binding protein-like protein; GTPase [Moritella sp. PE36] Length = 303 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + LGI E ++ + D PG+ Sbjct: 10 IAIVGRPNVGKSTLLNRILGQKVSITSRKPQTTRHRILGIDTEDNRQTVYIDTPGL 65 >gi|90407601|ref|ZP_01215782.1| GTP-binding protein HflX [Psychromonas sp. CNPT3] gi|90311304|gb|EAS39408.1| GTP-binding protein HflX [Psychromonas sp. CNPT3] Length = 449 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 4/128 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFIL-ADIPGIIKN- 219 + ++G NAGKS+ + ++T ++ + D F TL + ++ + IL +D G IK Sbjct: 228 VALVGYTNAGKSSLMRALTDSEVLVEDKLFATLDTTVRTLQPPTQPRILISDTVGFIKKL 287 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H L+ + +LL++V A + N ++ + L N +L KI + L+ Sbjct: 288 PHDLVASFHSTLEEAKDAALLLYVVDASDVNFKSQLAVVDHVLGELNVDLSNKILL--LN 345 Query: 280 QIDTVDSD 287 ++D + + Sbjct: 346 KVDCISEE 353 >gi|146292263|ref|YP_001182687.1| GTP-binding protein Era [Shewanella putrefaciens CN-32] gi|145563953|gb|ABP74888.1| GTP-binding protein Era [Shewanella putrefaciens CN-32] Length = 338 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + IIG PN GKST L + K I + P TT + +GI +G K+ + D PG+ Sbjct: 47 VAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPKQIVFIDTPGL 102 >gi|315651283|ref|ZP_07904311.1| ferrous iron transport protein B [Eubacterium saburreum DSM 3986] gi|315486435|gb|EFU76789.1| ferrous iron transport protein B [Eubacterium saburreum DSM 3986] Length = 719 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 36/162 (22%), Positives = 75/162 (46%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K G+ + I+ D+PGI + Sbjct: 5 IALTGNPNTGKTTLFNALTGSNQTVGNWPGVTVEKKEGKLK-GHSDVIITDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ +L+I+ + LE N+ Q +EL + ++ + Sbjct: 64 YTLEEVVARNYILNEKPDAVLNIIDGTNLERNLYLTSQV---------TELGVPV-VIAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D ++ ++++ G E S++ G GI + E Sbjct: 114 NMLDVLEKSGNKLDLDKMSESLGCPVVEISALKGTGIMEAAE 155 >gi|281355288|ref|ZP_06241782.1| GTP-binding proten HflX [Victivallis vadensis ATCC BAA-548] gi|281318168|gb|EFB02188.1| GTP-binding proten HflX [Victivallis vadensis ATCC BAA-548] Length = 449 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 11/165 (6%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN-A 220 I+G N GKS+ L +++ A+ + D F TL P I + E +L D G ++ Sbjct: 229 AIVGYTNVGKSSILRALSGAEILVKDQLFATLDPTTRRITLDDNLELLLTDTVGFVRKLP 288 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H L+ LL ++ + A ++ + L +E K I++V ++ Sbjct: 289 HSLVEAFKSTLEEAVLADFLLLVLDLSSNQLDAEWETTMSVLKELGAE-EKNIQVV-FNK 346 Query: 281 IDTVDSDT-LARKKNELATQCGQVP--FEFSSITGHGIPQILECL 322 +D VD + L R LA G P S+ TG G+ ++ E L Sbjct: 347 LDLVDRENDLVR----LARMNGLFPTAIYISTATGEGMDKLRERL 387 >gi|227832334|ref|YP_002834041.1| putative ferrous iron transport protein B [Corynebacterium aurimucosum ATCC 700975] gi|262183806|ref|ZP_06043227.1| putative ferrous iron transport protein B [Corynebacterium aurimucosum ATCC 700975] gi|227453350|gb|ACP32103.1| putative ferrous iron transport protein B [Corynebacterium aurimucosum ATCC 700975] Length = 644 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 31/54 (57%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 I ++G PN+GKST ++T AK + ++P TT+ + G K G L D PG Sbjct: 24 IALVGSPNSGKSTLFNALTGAKAQTGNWPGTTVEVSRGAWKLGESTADLIDFPG 77 >gi|119493602|ref|ZP_01624266.1| GTP-binding protein Era [Lyngbya sp. PCC 8106] gi|119452592|gb|EAW33775.1| GTP-binding protein Era [Lyngbya sp. PCC 8106] Length = 312 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 20/163 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 +GIIG PN GKST + + K I T L GI+ + I D PGI K Sbjct: 23 VGIIGRPNVGKSTLMNQMVGQKIAITSPVAQTTRNRLRGILTTPEAQIIFVDTPGIHKPH 82 Query: 221 HQGAGIGDRFLKHTE----RTHVLLHIVSALEENVQA--AYQCILDELSAYNSELRKKIE 274 HQ +G +K+ + VLL +V +V A + I D L++ + Sbjct: 83 HQ---LGQVLVKNAQIAIRSVDVLLFVVDG---SVMAGGGDRFIADLLNSTKVPV----- 131 Query: 275 IVGLSQID--TVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 I+GL+++D + + +L +FS++TG G+ Sbjct: 132 ILGLNKLDQQPQEPQRINESYQQLIESHSWPILQFSALTGTGV 174 >gi|332305562|ref|YP_004433413.1| GTP-binding protein Era [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172891|gb|AEE22145.1| GTP-binding protein Era [Glaciecola agarilytica 4H-3-7+YE-5] Length = 300 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L ++ K I P TT + +GI E ++ I D PG+ Sbjct: 10 IAIVGRPNVGKSTLLNALLGQKVSITSRKPQTTRHRIMGIDTEENRQAIYVDTPGL 65 >gi|313115151|ref|ZP_07800636.1| ferrous iron transport protein B [Faecalibacterium cf. prausnitzii KLE1255] gi|310622517|gb|EFQ05987.1| ferrous iron transport protein B [Faecalibacterium cf. prausnitzii KLE1255] Length = 728 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 18/158 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K G K+ I+ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNNLTGSNQYVGNWPGVTVEKKEGKLK-GDKDVIIQDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ +L+I+ + +E N+ Q I EL + ++ + Sbjct: 64 YTLEEVVSRTYLVKEKPDAILNIIDGTNIERNLYLTTQLI---------ELGIPV-VMAV 113 Query: 279 SQIDTV--DSDTLARKKNELATQCGQVPFEFSSITGHG 314 + ID V + D + KK L+ + G E S++ G G Sbjct: 114 NMIDLVRKNGDKIDLKK--LSAELGCQAVEISALKGEG 149 >gi|225182107|ref|ZP_03735535.1| GTP-binding protein Era [Dethiobacter alkaliphilus AHT 1] gi|225167194|gb|EEG76017.1| GTP-binding protein Era [Dethiobacter alkaliphilus AHT 1] Length = 302 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 4/77 (5%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I +IG PN GKST + A V I+D P TT GI+ + + D PGI K Sbjct: 13 IALIGRPNVGKSTLMNAFVGEKMAIISDKPQTTRNQIRGILTADDYQAVFLDTPGIHKPQ 72 Query: 221 HQGAGIGDRFLKHTERT 237 H+ +G++ ++ RT Sbjct: 73 HK---LGEKMVQVAVRT 86 >gi|226493944|ref|NP_001145694.1| hypothetical protein LOC100279198 [Zea mays] gi|219884045|gb|ACL52397.1| unknown [Zea mays] Length = 588 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 9/135 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 + + ++G NAGKST +++++ A D F T+ P L ++ ++ +L+D G I Sbjct: 300 LVTVAVVGYTNAGKSTLVSALSEADLYSDDRLFATVDPRLRSVILPSGRKALLSDTVGFI 359 Query: 218 KNAH-QGAGIGDRFLKHTERTHVLLHIV----SALEENVQAAYQCILDELSAYNSELRKK 272 + Q L+ +L+H++ S LEE+ Q +L ++ ++ Sbjct: 360 SDLPVQLVEAFHATLEEVVEADMLVHVLDSSASNLEEHRSTVLQ-VLQQIGVSQEKINNM 418 Query: 273 IEIVGLSQIDTVDSD 287 IE+ ++ID VD + Sbjct: 419 IEV--WNKIDLVDEN 431 >gi|52140694|ref|YP_086135.1| ferrous iron transport protein B [Bacillus cereus E33L] gi|51974163|gb|AAU15713.1| ferrous iron transport protein B [Bacillus cereus E33L] Length = 662 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 17/167 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 4 VALLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--KQGTLIDLPGVYDLNP 61 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + G+ FL E H +L+IV S E N+ Q + E K + I G Sbjct: 62 VSRDEGVVTNFLLTEEFQH-MLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-G 110 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 L+ ID + L+ G + +G G ++L L + Sbjct: 111 LNMIDVAKQRGIVIDVKRLSELLGVTVVPVVARSGKGCEELLATLKE 157 >gi|86130796|ref|ZP_01049395.1| GTP-binding protein HflX [Dokdonia donghaensis MED134] gi|85818207|gb|EAQ39367.1| GTP-binding protein HflX [Dokdonia donghaensis MED134] Length = 408 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 10/115 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + + ++G N GKST + ++++K + F TL + V G F+L+D G I+ Sbjct: 199 LVRVALVGYTNVGKSTLMNVISKSKVFAENKLFATLDTTVRKVVIGNLPFLLSDTVGFIR 258 Query: 219 NAHQGAGIGDRF---LKHTERTHVLLHIVS----ALEENVQAAYQCILDELSAYN 266 + D F L +LLH+V E+++ A + ILDE+ + + Sbjct: 259 KL--PTQLVDSFKSTLDEVREADLLLHVVDISHPQFEDHINAVNK-ILDEIKSMD 310 >gi|304398619|ref|ZP_07380491.1| GTP-binding protein Era [Pantoea sp. aB] gi|304353830|gb|EFM18205.1| GTP-binding protein Era [Pantoea sp. aB] Length = 301 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 VAIVGRPNVGKSTLLNQLLGQKVSITSRKPQTTRHRIMGIHTEGEYQAIYVDTPGL 66 >gi|253689439|ref|YP_003018629.1| GTP-binding protein Era [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756017|gb|ACT14093.1| GTP-binding protein Era [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 301 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 IAIVGRPNVGKSTLLNQLLGQKISITSRKPQTTRHRIMGIHTEGPYQAIYVDTPGL 66 >gi|212702784|ref|ZP_03310912.1| hypothetical protein DESPIG_00814 [Desulfovibrio piger ATCC 29098] gi|212673841|gb|EEB34324.1| hypothetical protein DESPIG_00814 [Desulfovibrio piger ATCC 29098] Length = 740 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 3/100 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T + T A+ + +YP T+ G V+ G + L D+PG A Sbjct: 21 IALAGNPNCGKTTVFNAYTGARQHVGNYPGVTVDRKEGHVRHGNADITLVDLPGTYSLTA 80 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCI 258 + + R + ++++V SALE N+ Q + Sbjct: 81 YSMEELVARAELGSGDVQAVINVVDASALERNLLLTVQMM 120 >gi|254442831|ref|ZP_05056307.1| GTP-binding proten HflX [Verrucomicrobiae bacterium DG1235] gi|198257139|gb|EDY81447.1| GTP-binding proten HflX [Verrucomicrobiae bacterium DG1235] Length = 435 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 76/168 (45%), Gaps = 8/168 (4%) Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPG 215 K + + I+G NAGKS+ L ++T + AD F TL P ++ + + ++ D G Sbjct: 202 KPVPTVAIVGYTNAGKSSLLNTMTDSDVLAADKLFATLDPTTRRLELDNSQHVLVTDTVG 261 Query: 216 IIKN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 ++ H+ L+ +L+H+V + + +Q ++ L ++ K Sbjct: 262 FVRRLPHRLVEAFKATLEEAVVADLLIHVVDVTNPDAEKHFQTTMEVLKEIEAD--KNPM 319 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 +V ++ID ++ D R++ + S+ TG GI ++ E + Sbjct: 320 LVVFNKIDALE-DPSDRERFMFTHKDA---LYISANTGEGIAELKETI 363 >gi|167761626|ref|ZP_02433753.1| hypothetical protein CLOSCI_04038 [Clostridium scindens ATCC 35704] gi|167660769|gb|EDS04899.1| hypothetical protein CLOSCI_04038 [Clostridium scindens ATCC 35704] Length = 426 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 10/163 (6%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN-A 220 I+G NAGKST L ++T A D F TL P +K +E +L D G I+ Sbjct: 205 AIVGYTNAGKSTLLNTLTGAGILAEDKLFATLDPTTRELKLPSGQEILLTDTVGFIRKLP 264 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H L+ ++LH+V A N Q Q + + N + K + ++ Sbjct: 265 HHLIEAFRSTLEEARYADIILHVVDA--ANPQMDEQMYIVYETLQNLGVTDKPIVTIFNK 322 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLH 323 D D + R + + S+ T GIP++L+ + Sbjct: 323 QDKAQDDVIIRDFH------ADYTVKISAKTREGIPELLKTIE 359 >gi|145640014|ref|ZP_01795612.1| GTP-binding protein EngA [Haemophilus influenzae PittII] gi|145270901|gb|EDK10820.1| GTP-binding protein EngA [Haemophilus influenzae PittII] Length = 504 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHIAGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L + ++L +V A +A ++ Y + + K IV Sbjct: 65 EEGVEEKMAEQSLLAIDEADIVLFLVDA-----RAGLTVADIGIANYLRQRQNKTTIVVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G++ + ++ G G+ Q++E Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGEIE-QIAASQGRGVTQLME 158 >gi|21227135|ref|NP_633057.1| ferrous iron transport protein B [Methanosarcina mazei Go1] gi|20905466|gb|AAM30729.1| Ferrous iron transport protein B [Methanosarcina mazei Go1] Length = 665 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + IG P+ GKS F + +T ++++YP TT+ G VK + + D+PGI + Sbjct: 31 LAFIGNPSVGKSVFFSRLTGVGVEVSNYPGTTVSLKQGTVKVNDRTIEVVDLPGIYSLGV 90 Query: 220 AHQGAGIGDRFL 231 A++ + RFL Sbjct: 91 ANEDEKVTKRFL 102 >gi|28199629|ref|NP_779943.1| ferrous iron transport protein B [Xylella fastidiosa Temecula1] gi|182682374|ref|YP_001830534.1| ferrous iron transport protein B [Xylella fastidiosa M23] gi|28057744|gb|AAO29592.1| ferrous iron transport protein B [Xylella fastidiosa Temecula1] gi|182632484|gb|ACB93260.1| ferrous iron transport protein B [Xylella fastidiosa M23] gi|307578656|gb|ADN62625.1| ferrous iron transport protein B [Xylella fastidiosa subsp. fastidiosa GB514] Length = 617 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 11/65 (16%) Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY------KEFIL 210 K + + ++G PN+GK+ +T ++ K+A+YP T+ KEGY +EF++ Sbjct: 3 KHVLRLALVGNPNSGKTALFNRLTGSRQKVANYPGVTVER-----KEGYFRASSGREFVI 57 Query: 211 ADIPG 215 D+PG Sbjct: 58 LDLPG 62 >gi|85703310|ref|ZP_01034414.1| GTP-binding protein HflX [Roseovarius sp. 217] gi|85672238|gb|EAQ27095.1| GTP-binding protein HflX [Roseovarius sp. 217] Length = 424 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 34/189 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKN 219 + ++G NAGKST +T A D F TL P + V EG E IL+D G I + Sbjct: 205 VALVGYTNAGKSTLFNRLTGADVMAKDMLFATLDPTMRRVALPEGGPEVILSDTVGFISD 264 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS-----AYNSELRKKIE 274 T ++ + LEE + A C + ++S + + ++ +E Sbjct: 265 LP---------------TELVAAFRATLEEVLSADLICHVRDISHPETVSQSRDVAAILE 309 Query: 275 IVGLS----------QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 +G+S +ID ++ + A + Q S+ITG GI ++ + Sbjct: 310 SLGVSDKTPQIEIWNKIDQLEDEARAAAVTQAERQDD--VLAISAITGQGINDLVAAIGA 367 Query: 325 KIFSIRGEN 333 K+ + E Sbjct: 368 KLADVTHET 376 >gi|300813666|ref|ZP_07093988.1| GTP-binding protein HflX [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512208|gb|EFK39386.1| GTP-binding protein HflX [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 422 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 9/111 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPK---IADYPFTTLYPNLGIVKE-GYKEFILADIP 214 I + ++G NAGKST L + K + D F TL PN + +EFI++D Sbjct: 199 IPTVSLVGYTNAGKSTILNRIKEDDSKEVFVKDMLFATLDPNSRKARLLSGREFIISDTV 258 Query: 215 GIIKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 G + + + + F L+ + + +++H++ A ++++ AY ++ L Sbjct: 259 GFV--SKLPTKLIEAFKSTLEEIKYSDLIVHVIDASSKDLEIAYDTTMNIL 307 >gi|262304289|gb|ACY44737.1| GTP-binding protein [Scutigera coleoptrata] Length = 280 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H L H+ A +++ V+ + D L Sbjct: 35 VVDIAGLVKGASEGQGLGNAFLSHISACDALFHLCRAFDDDDVTHVEGEINPVRD-LEII 93 Query: 266 NSELRKK 272 N ELR K Sbjct: 94 NEELRLK 100 >gi|126737691|ref|ZP_01753421.1| GTP-binding protein HflX [Roseobacter sp. SK209-2-6] gi|126721084|gb|EBA17788.1| GTP-binding protein HflX [Roseobacter sp. SK209-2-6] Length = 423 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 13/180 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKN 219 + ++G NAGKST +T A+ D F TL P + V+ +G E IL+D G I + Sbjct: 205 VALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVELPDG-PEIILSDTVGFISD 263 Query: 220 AHQGAGIGDR-FLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEI 275 R L+ V+LH+ +S E QA IL+ L +S R +IEI Sbjct: 264 LPTELVAAFRATLEEVLAADVILHVRDISHDETAKQAEDVASILESLGVDDS--RAQIEI 321 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 +++D + + ++ + S++TG G+P +L+ + K+ + E +F Sbjct: 322 --WNKLDQLSEEEAIARRERAEREED--VHAISALTGEGLPGLLQDIATKLQGVLFEEQF 377 >gi|320449719|ref|YP_004201815.1| GTP-binding protein Era [Thermus scotoductus SA-01] gi|320149888|gb|ADW21266.1| GTP-binding protein Era [Thermus scotoductus SA-01] Length = 301 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + I+G PN GKST L ++ K I+ P TT GI+ EG ++ + D PG+ K Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGNRQIVFVDTPGLHK 67 >gi|293391945|ref|ZP_06636279.1| GTP-binding protein EngA [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952479|gb|EFE02598.1| GTP-binding protein EngA [Aggregatibacter actinomycetemcomitans D7S-1] Length = 510 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 9/130 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHLAGHDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E ++L +V A +A ++ Y + + K +V Sbjct: 65 EEGVEEKMAEQSLLAIEEADIVLFLVDA-----RAGLTSADIGIANYLRQRQNKTTVVVA 119 Query: 279 SQIDTVDSDT 288 +++D +D+D+ Sbjct: 120 NKVDGIDADS 129 >gi|254492694|ref|ZP_05105865.1| putative GTPase [Methylophaga thiooxidans DMS010] gi|224462215|gb|EEF78493.1| putative GTPase [Methylophaga thiooxydans DMS010] Length = 468 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 I ++G PN GKST +TR++ +ADY T G V+E +FIL D G+ Sbjct: 5 IALVGRPNVGKSTIFNRLTRSRDALVADYAGLTRDRIYGTVREENLDFILIDTGGL 60 >gi|199582356|gb|ACH89849.1| putative GDP binding protein [Alpheus cf. malleator CRH-2008] gi|199582362|gb|ACH89852.1| putative GDP binding protein [Alpheus cf. malleator CRH-2008] gi|199582364|gb|ACH89853.1| putative GDP binding protein [Alpheus cf. malleator CRH-2008] gi|199582366|gb|ACH89854.1| putative GDP binding protein [Alpheus cf. malleator CRH-2008] gi|199582368|gb|ACH89855.1| putative GDP binding protein [Alpheus cf. malleator CRH-2008] Length = 218 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 10/69 (14%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + L H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDALFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE 268 DEL + E Sbjct: 63 DELRLKDIE 71 >gi|166365910|ref|YP_001658183.1| ferrous iron transport protein B [Microcystis aeruginosa NIES-843] gi|166088283|dbj|BAG02991.1| ferrous iron transport protein B [Microcystis aeruginosa NIES-843] Length = 774 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 17/161 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I +IG PN GK+T ++T A + ++P T+ G + ++ L D+PG+ + Sbjct: 6 IALIGNPNCGKTTLFNALTGANQRTGNWPGVTVDRKEGRFQVNGEDITLVDLPGVYSLDV 65 Query: 221 HQGAGIGDRFLKH----TERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 +G D + + ++++IV A LE N+ Q + E+R + Sbjct: 66 EEGETGMDELVARDYLLSGEADLVINIVDAANLERNLYLTTQIM---------EMRLPM- 115 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 ++ L+ +D + + L+ + + S++ G GI Sbjct: 116 LIALNMMDVAKTRGIVVNPQLLSDRMDAIVVAISAVKGEGI 156 >gi|145641461|ref|ZP_01797039.1| GTP-binding protein EngA [Haemophilus influenzae R3021] gi|145273752|gb|EDK13620.1| GTP-binding protein EngA [Haemophilus influenzae 22.4-21] Length = 504 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHIAGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L + ++L +V A +A ++ Y + + K IV Sbjct: 65 EEGVEEKMAEQSLLAIDEADIVLFLVDA-----RAGLTVADIGIANYLRQRQNKTTIVVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G++ + ++ G G+ Q++E Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGEIE-QIAASQGRGVTQLME 158 >gi|78223754|ref|YP_385501.1| small GTP-binding protein domain-containing protein [Geobacter metallireducens GS-15] gi|78195009|gb|ABB32776.1| Small GTP-binding protein domain [Geobacter metallireducens GS-15] Length = 516 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 17/169 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + I+G NAGKST L ++TR+ + F TL + ++ +E I+ D G I++ Sbjct: 342 VSIVGYTNAGKSTLLNALTRSHVFTENLLFATLDTSTRRLRFPREREVIITDTVGFIRSL 401 Query: 221 HQG-AGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKIEI 275 + G L+ + +LLH+V +EE + + IL+EL +L K + Sbjct: 402 PKSLMGAFKATLEELQDADLLLHLVDCTNPRVEEQIHQV-ETILEEL-----DLGDKQRL 455 Query: 276 VGLSQIDTVDSDTLARKKNELA-TQCGQVPFEFSSITGHGI-PQILECL 322 + +++D + +KK+ L + Q+ F++IT P LE L Sbjct: 456 MVFNKVDILPE---LKKKSPLGFMKVRQLSRRFNAITVSATNPSSLESL 501 >gi|313679135|ref|YP_004056874.1| GTP-binding protein era [Oceanithermus profundus DSM 14977] gi|313151850|gb|ADR35701.1| GTP-binding protein Era [Oceanithermus profundus DSM 14977] Length = 300 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L + K I+ P TT GI EG ++ + D PG+ K A Sbjct: 13 VAILGKPNVGKSTLLNQMLGVKVAPISPKPQTTRKSVRGIYTEGNRQIVFVDTPGLHKPA 72 >gi|308187805|ref|YP_003931936.1| GTP-binding protein [Pantoea vagans C9-1] gi|308058315|gb|ADO10487.1| GTP-binding protein [Pantoea vagans C9-1] Length = 301 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 VAIVGRPNVGKSTLLNQLLGQKVSITSRKPQTTRHRIMGIHTEGNYQAIYVDTPGL 66 >gi|262304199|gb|ACY44692.1| GTP-binding protein [Achelia echinata] Length = 279 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 24/41 (58%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G+ FL H L H+ A E++ Sbjct: 35 ITDIAGLVKGASEGQGLGNAFLSHISACDALFHLTRAFEDD 75 >gi|238022265|ref|ZP_04602691.1| hypothetical protein GCWU000324_02172 [Kingella oralis ATCC 51147] gi|237866879|gb|EEP67921.1| hypothetical protein GCWU000324_02172 [Kingella oralis ATCC 51147] Length = 377 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 6/89 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL---YPNLGIVKEGYKEFILADIPGIIK 218 + I+G NAGKST +T++ D F TL L + E IL+D G ++ Sbjct: 214 MAIVGYTNAGKSTLFNRLTKSDVFAKDQLFATLDTTARRLYLAPEA--SIILSDTVGFVQ 271 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSA 246 + HQ L+ T VLLHIV A Sbjct: 272 DLPHQLVSAFSATLEETALADVLLHIVDA 300 >gi|199582390|gb|ACH89866.1| putative GDP binding protein [Alpheus simus] gi|199582392|gb|ACH89867.1| putative GDP binding protein [Alpheus simus] Length = 218 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 10/69 (14%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + L H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDALFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE 268 DEL + E Sbjct: 63 DELRLKDIE 71 >gi|199582388|gb|ACH89865.1| putative GDP binding protein [Alpheus saxidomus] Length = 218 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 10/69 (14%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + L H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDALFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE 268 DEL + E Sbjct: 63 DELRLKDIE 71 >gi|196033042|ref|ZP_03100455.1| ferrous iron transport protein B [Bacillus cereus W] gi|195994471|gb|EDX58426.1| ferrous iron transport protein B [Bacillus cereus W] Length = 662 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 17/167 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 4 VALLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--KQGTLIDLPGVYDLNP 61 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + G+ FL E H +L+IV S E N+ Q + E K + I G Sbjct: 62 VSRDEGVVTNFLLTEEFQH-MLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-G 110 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 L+ ID + L+ G + +G G ++L L + Sbjct: 111 LNMIDVAKQRGIVIDVKRLSELLGVTVVPVVARSGKGCEELLATLKE 157 >gi|148708453|gb|EDL40400.1| developmentally regulated GTP binding protein 1 [Mus musculus] gi|149047488|gb|EDM00158.1| developmentally regulated GTP binding protein 1, isoform CRA_a [Rattus norvegicus] gi|149047489|gb|EDM00159.1| developmentally regulated GTP binding protein 1, isoform CRA_a [Rattus norvegicus] Length = 120 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 27/43 (62%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK 202 A IG +G P+ GKST L+++ ++A Y FTTL G+++ Sbjct: 65 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIR 107 >gi|323141988|ref|ZP_08076839.1| ribosome biogenesis GTPase Era [Phascolarctobacterium sp. YIT 12067] gi|322413520|gb|EFY04388.1| ribosome biogenesis GTPase Era [Phascolarctobacterium sp. YIT 12067] Length = 287 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 8/91 (8%) Query: 164 IIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 ++G PN GKST S+ K I +D P TT + I+ + + D PGI K H+ Sbjct: 1 MVGRPNVGKSTLTNSLIGEKIAIMSDRPQTTRNKIMCIMNTDNAQIMFLDTPGIHKPQHK 60 Query: 223 GAGIGDRFLKHTERT----HVLLHIVSALEE 249 +G+ ++ E T V+L +V A E+ Sbjct: 61 ---LGEYMVRTAESTLQEVDVVLFVVDATEK 88 >gi|309388936|gb|ADO76816.1| GTP-binding protein Era [Halanaerobium praevalens DSM 2228] Length = 293 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 36/171 (21%), Positives = 74/171 (43%), Gaps = 16/171 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PN GKST + ++ K I+ P TT I E + I D PGI Sbjct: 8 VTVIGRPNVGKSTLVNTLIGEKINIISPRPQTTRNSIKAIYTEAEGQIIFIDTPGI---- 63 Query: 221 HQGAGIGDRFLK-----HTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 H+ D++++ + +++ I+ + Y DE+ + K+ I Sbjct: 64 HEARNELDKYMQGEAYNSLDGIDIIIFILDG------STYWGKNDEMIYKQLKSSKQDII 117 Query: 276 VGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 +++ID + + L +++ E + + GQ S++ +L + +++ Sbjct: 118 YVMNKIDKMSNKDLIKRQKEYSQKVGQEVIPISALNNKNTDTLLTEIFNRL 168 >gi|307249625|ref|ZP_07531611.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858323|gb|EFM90393.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 506 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 13/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHANIAGHDFIVIDTGG-IDGT 63 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A V A D A R+K +V Sbjct: 64 EEGVEEKMAEQSLLAIEEADVVLFLVDARAGLVPA------DIGIAQYLRQREKTTVVVA 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +++D+ + +L G+V + ++ G G+ Q++E Sbjct: 118 NKTDGINADSHCAEFYQLG--LGEVE-QIAAAQGRGVTQLIE 156 >gi|199582394|gb|ACH89868.1| putative GDP binding protein [Alpheus simus] Length = 218 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 10/69 (14%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + L H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDALFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE 268 DEL + E Sbjct: 63 DELRLKDIE 71 >gi|157814202|gb|ABV81846.1| putative GTP-binding protein [Mesocyclops edax] Length = 280 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 10/87 (11%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + L H+ E+ +++ I D L Sbjct: 35 IVDIAGLVKGASEGQGLGNAFLSHIKACDALFHLCRTFEDKEITHIEGEVDPIRD-LDII 93 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARK 292 N ELR K ++ S+I D L RK Sbjct: 94 NEELRLK-DVEYFSKI----YDELERK 115 >gi|317010763|gb|ADU84510.1| GTP-binding protein Era [Helicobacter pylori SouthAfrica7] Length = 301 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 25/177 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYK-EFILADIPG 215 + +IG PNAGKST L ++ A + + + + KEGY+ + I D PG Sbjct: 8 VALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPG 67 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS--ELRKKI 273 + HQ ++ L + L + A + + D+L Y L +K Sbjct: 68 L---HHQ-----EKLLNQCMLSQALKAMGDA---ELCVFLASVHDDLKGYEEFLSLCQKP 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECLHDKI 326 I+ LS+IDT + +K E Q VP S+ + +LEC+ + + Sbjct: 117 HILALSKIDTATHKQVLQKLQEYQQYAPQFLSLVP--LSAKKSQNLNALLECISEHL 171 >gi|262304239|gb|ACY44712.1| GTP-binding protein [Endeis laevis] Length = 279 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 24/41 (58%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G+ FL H L H+ A E++ Sbjct: 35 ITDIAGLVKGASEGQGLGNAFLSHISACDALFHLTRAFEDD 75 >gi|217034385|ref|ZP_03439800.1| hypothetical protein HP9810_889g30 [Helicobacter pylori 98-10] gi|216943180|gb|EEC22650.1| hypothetical protein HP9810_889g30 [Helicobacter pylori 98-10] Length = 301 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 25/173 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYK-EFILADIPG 215 I +IG PNAGKST L ++ A + + + + KEGY+ + I D PG Sbjct: 8 IALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPG 67 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS--ELRKKI 273 + HQ + L L + E V A + D+L Y L +K Sbjct: 68 L---HHQEKLLNQCMLSQA------LKAMGDAELCVFLA--SVHDDLKGYEEFLSLCQKP 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECL 322 I+ +S+IDT + +K E Q VP S+ + +LEC+ Sbjct: 117 HILAVSKIDTATHKQVLQKLQEYQQYASQFLALVP--LSAKKSQNLNALLECI 167 >gi|199582370|gb|ACH89856.1| putative GDP binding protein [Alpheus cf. malleator CRH-2008] gi|199582372|gb|ACH89857.1| putative GDP binding protein [Alpheus malleator] gi|199582374|gb|ACH89858.1| putative GDP binding protein [Alpheus malleator] gi|199582376|gb|ACH89859.1| putative GDP binding protein [Alpheus malleator] Length = 218 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 10/69 (14%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + L H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDALFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE 268 DEL + E Sbjct: 63 DELRLKDIE 71 >gi|199582268|gb|ACH89805.1| putative GDP binding protein [Alpheus millsae] Length = 216 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + + H+ A E+ N + IL Sbjct: 1 VTDIAGLVKGASEGQGLGNAFLSHIKACDAIFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 60 Query: 260 DELSAYNSE--------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 DEL + E L K +E G ++ + DT+ R K+ L + V F Sbjct: 61 DELRLKDIEYINNVWDKLYKLVERGGDKKLKP-EYDTICRVKSLLEEEKRHVRF 113 >gi|168186800|ref|ZP_02621435.1| GTP-binding protein EngA [Clostridium botulinum C str. Eklund] gi|169295122|gb|EDS77255.1| GTP-binding protein EngA [Clostridium botulinum C str. Eklund] Length = 438 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 21/178 (11%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I +IG PN GKS+ + + K +++ P TT ++ +F+L D G+ + + Sbjct: 179 IAMIGRPNVGKSSLINRILGEEKHIVSNIPGTTRDAVDSYIETEEGKFVLIDTAGLRRKS 238 Query: 221 HQGAGI----GDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + R L E V + ++ A E+ + + I Y E+ K I +V Sbjct: 239 KIKEQVERYSAVRTLASIENADVCILMIDATEDIAEQDERII-----GYAHEINKAI-VV 292 Query: 277 GLSQIDTVDSD--TLARKKNELATQCGQVPFE----FSSITGHGIPQIL----ECLHD 324 +++ D ++ D T+ K++L T+ +P+ S+ TG + ++L EC ++ Sbjct: 293 IVNKWDLIEKDDKTMKNFKDKLRTKLSFLPYASFLFISAKTGQRVHKVLGMAKECYNN 350 >gi|206976975|ref|ZP_03237876.1| ferrous iron transport protein B [Bacillus cereus H3081.97] gi|222098280|ref|YP_002532337.1| ferrous iron transport protein b [Bacillus cereus Q1] gi|206744780|gb|EDZ56186.1| ferrous iron transport protein B [Bacillus cereus H3081.97] gi|221242338|gb|ACM15048.1| ferrous iron transport protein B [Bacillus cereus Q1] Length = 662 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 17/167 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 4 VALLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--KQGTLIDLPGVYDLNP 61 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + G+ FL E H +L+IV S E N+ Q + E K + I G Sbjct: 62 VSRDEGVVTNFLLTEEFQH-MLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-G 110 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 L+ ID + L+ G + +G G ++L L + Sbjct: 111 LNMIDVAKQRGIVIDVKRLSELLGVTVVPVVARSGKGCEELLATLKE 157 >gi|217962299|ref|YP_002340869.1| ferrous iron transport protein B [Bacillus cereus AH187] gi|217063196|gb|ACJ77446.1| ferrous iron transport protein B [Bacillus cereus AH187] Length = 662 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 17/167 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 4 VALLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--KQGTLIDLPGVYDLNP 61 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + G+ FL E H +L+IV S E N+ Q + E K + I G Sbjct: 62 VSRDEGVVTNFLLTEEFQH-MLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-G 110 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 L+ ID + L+ G + +G G ++L L + Sbjct: 111 LNMIDVAKQRGIVIDVKRLSELLGVTVVPVVARSGKGCEELLATLKE 157 >gi|19703615|ref|NP_603177.1| GTP-binding protein Era [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|25008422|sp|Q8RGM1|ERA_FUSNN RecName: Full=GTPase Era gi|19713721|gb|AAL94476.1| GTP-binding protein era [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 296 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 9/165 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST + + K I T N+ GI+ ++I D PGI K Sbjct: 6 IAVVGRPNVGKSTLINKLVSEKVAIVSDKAGTTRDNIKGILNFKDNQYIFIDTPGIHKPQ 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H G + + +K + ++L ++ A + + ++D + +E KK I+ ++ Sbjct: 66 HLLGEYMTNIAVKILKDVDIILFLIDA-SKPIGTGDMFVMDRI----NENSKKPRILLVN 120 Query: 280 QIDTVDSDTLARKKNELATQCGQV-PFEFSS-ITGHGIPQILECL 322 ++D + + K E+ + G+ F+S + GI Q+LE L Sbjct: 121 KVDLISDEQKEEKIKEIEEKLGKFDKIIFASGMYSFGISQLLEAL 165 >gi|291542200|emb|CBL15310.1| GTP-binding protein Era [Ruminococcus bromii L2-63] Length = 305 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 40/182 (21%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 A I I+G PN GKS+ L + K I + P TT G++ +G + + D PG+ Sbjct: 11 AFIAIVGRPNVGKSSILNRLMGQKIAIVSSKPQTTRNRITGVLTQGEYQLVFFDTPGM-- 68 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL----------DELSAYNSE 268 H +T + ++V ++ E+V C+L EL+ E Sbjct: 69 --------------HKPKTSLGKYMVRSVNESVGGVDCCMLVVEAGKEPGDTELNLI--E 112 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQ--VPFEFSSIT------GHGIPQILE 320 K +E+ + I+ +D+ ++K EL Q + + ++F ++ G+G+ ++L+ Sbjct: 113 KFKSMEMPAILAINKIDT---LKEKEELMKQIARYSLLYDFDAVVPVSAQDGNGMNELLD 169 Query: 321 CL 322 L Sbjct: 170 EL 171 >gi|317153712|ref|YP_004121760.1| GTP-binding proten HflX [Desulfovibrio aespoeensis Aspo-2] gi|316943963|gb|ADU63014.1| GTP-binding proten HflX [Desulfovibrio aespoeensis Aspo-2] Length = 535 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 14/133 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + ++G NAGKST L ++T++K D F TL P ++ +E +L D G I+ Sbjct: 369 VSLVGYTNAGKSTLLNTLTQSKVLAEDKLFATLDPTSRRIRFPQEREVVLTDTVGFIRRL 428 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSA----LEENVQAAYQCILD-ELSAYNSELRKKIE 274 R L+ E +L+ + A E+ V+A + D EL A S Sbjct: 429 PPDLKEAFRATLEELESADLLVLVCDAAHPEAEQQVEAVRSILADMELDAIPS------- 481 Query: 275 IVGLSQIDTVDSD 287 I+ L++ D +D + Sbjct: 482 ILVLNKWDRLDEE 494 >gi|260220752|emb|CBA28631.1| GTP-binding protein era homolog [Curvibacter putative symbiont of Hydra magnipapillata] Length = 393 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 8/90 (8%) Query: 127 NAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKI 186 +A + P A PG G + L + I+G PN GKST L ++ K I Sbjct: 73 DAMLEGLLKSTPKLATPGTDGAGQRCGL-------VAIVGKPNVGKSTLLNALVGQKISI 125 Query: 187 ADYPF-TTLYPNLGIVKEGYKEFILADIPG 215 TT + G+ EG +F+ D PG Sbjct: 126 TSRKAQTTRHRITGMRTEGQTQFVFVDTPG 155 >gi|238921035|ref|YP_002934550.1| GTP-binding protein EngA [Edwardsiella ictaluri 93-146] gi|259645874|sp|C5BES7|DER_EDWI9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238870604|gb|ACR70315.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 494 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D GI Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVNGHEFIIIDTGGI 60 Query: 217 --IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 +N + + ++ L E ++L +V A + + A DE A + R K Sbjct: 61 DGTENGVE-THMAEQSLMAIEEADIVLFLVDARDGLLPA------DEAIARHLRSRDKAT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + ++ D +D++ L G+V ++ G G+ Q++E Sbjct: 114 FLVANKTDGIDAEVAVGDFYSLG--MGEV-HPIAASHGRGVTQLIE 156 >gi|256828007|ref|YP_003156735.1| small GTP-binding protein [Desulfomicrobium baculatum DSM 4028] gi|256577183|gb|ACU88319.1| small GTP-binding protein [Desulfomicrobium baculatum DSM 4028] Length = 445 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 35/158 (22%), Positives = 70/158 (44%), Gaps = 18/158 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-VKEGYKEFILADIPGIIKNA 220 I ++G PNAGKS+ + ++ K + T + + V+ G K + D G+ + + Sbjct: 183 IALLGRPNAGKSSTINALLGKKRLMVSAEAGTTRDCVDVTVQRGGKTYTFVDTAGVRRKS 242 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE------ 274 + + E V+ + +A + +V I+D + + L ++ Sbjct: 243 --------KVIDSLEYFSVVHSMQAAKQADVVVLVLDIMDGVVGQDKRLLSFLDTEKVPF 294 Query: 275 IVGLSQIDTVDSDTLARKKNELATQ---CGQVPFEFSS 309 ++ +++ID + D LA+ K +L Q C VP +SS Sbjct: 295 VIVVNKIDLLSKDQLAKTKKDLVDQFAFCAHVPVLYSS 332 >gi|225376604|ref|ZP_03753825.1| hypothetical protein ROSEINA2194_02246 [Roseburia inulinivorans DSM 16841] gi|225211487|gb|EEG93841.1| hypothetical protein ROSEINA2194_02246 [Roseburia inulinivorans DSM 16841] Length = 414 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 20/126 (15%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNAH 221 I+G NAGKST + ++T A D F TL P +++ G ++ ++ D G I Sbjct: 205 AIVGYTNAGKSTLINTLTNAGVLEEDKLFATLDPTTRVLELSGQQQILVTDTVGFI---- 260 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV--GLS 279 R L H H++ S LEE A Y IL + A N + K++ IV L+ Sbjct: 261 -------RKLPH----HLIEAFKSTLEEAKYADY--ILHVVDASNPQHEKQMLIVYETLA 307 Query: 280 QIDTVD 285 +D D Sbjct: 308 NLDVKD 313 >gi|241204548|ref|YP_002975644.1| GTP-binding proten HflX [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858438|gb|ACS56105.1| GTP-binding proten HflX [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 441 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 16/174 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST +T A D F TL P L +K + + IL+D G I + Sbjct: 205 VALVGYTNAGKSTLFNRITGAGVLAEDMLFATLDPTLRRMKLPHGRTVILSDTVGFISDL 264 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAA---YQCILDELSAYNSELRKKIEI 275 H A L+ ++LH+ + + QA IL++L +E K++ I Sbjct: 265 PTHLVAAFRA-TLEEVLEADLILHVRDMSDADNQAQSSDVMRILNDLGIDEAEAEKRL-I 322 Query: 276 VGLSQIDTVDS---DTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID ++ DT+ +K + S+++G G+ ++E + ++ Sbjct: 323 EVWNKIDRLEPEVHDTMVQKSAGASNVVA-----VSAVSGEGVDTLMEEISRRL 371 >gi|164686728|ref|ZP_02210756.1| hypothetical protein CLOBAR_00323 [Clostridium bartlettii DSM 16795] gi|164604118|gb|EDQ97583.1| hypothetical protein CLOBAR_00323 [Clostridium bartlettii DSM 16795] Length = 637 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 18/147 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI-- 216 + +I + G PN GK+T +T + + ++P T+ G + E K + D+PGI Sbjct: 1 MINIALFGNPNVGKTTVFNLLTGSNQYVGNWPGVTIEKKEGYLNEDIK---IVDLPGIYA 57 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + + FL++ E V+L+IV A L N+ Q L YN + Sbjct: 58 MDTFSNEEKVSKSFLEN-EDVDVILNIVDASNLSRNLYLTTQ-----LMKYNKPI----- 106 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCG 301 I+ L+ +D +S + ++LA + G Sbjct: 107 ILLLNMLDLAESKGIQIDYDKLANELG 133 >gi|300088459|ref|YP_003758981.1| GTP-binding protein YchF [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299528192|gb|ADJ26660.1| GTP-binding protein YchF [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 361 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 15/123 (12%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKP-----------KIADYPFTTLYPNLGIVKEGYKEFI 209 DIGIIGL +G++T + T P ++ D L K + E Sbjct: 4 DIGIIGLAQSGRTTVFQAATGGTPRPGEAAHVGVARVPDERIDKLSAMFNPKKTTFAEVK 63 Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILD---ELSAYN 266 D+ +K+ Q +G+G L+ L+++V A E++ Q +D ++ A N Sbjct: 64 YLDLGASVKSLAQ-SGVGGEALRELSNMDELINVVRAFEDDTVPHSQVTVDAARDIEAMN 122 Query: 267 SEL 269 EL Sbjct: 123 LEL 125 >gi|282881831|ref|ZP_06290484.1| GTP-binding protein HflX [Peptoniphilus lacrimalis 315-B] gi|281298323|gb|EFA90766.1| GTP-binding protein HflX [Peptoniphilus lacrimalis 315-B] Length = 422 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 9/111 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPK---IADYPFTTLYPNLGIVKE-GYKEFILADIP 214 I + ++G NAGKST L + K + D F TL PN + +EFI++D Sbjct: 199 IPTVSLVGYTNAGKSTILNRIKEDDSKEVFVKDMLFATLDPNSRKARLLSGREFIISDTV 258 Query: 215 GIIKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 G + + + + F L+ + + +++H++ A ++++ AY ++ L Sbjct: 259 GFV--SKLPTKLIEAFKSTLEEIKYSDLIVHVIDASSKDLEIAYDTTMNIL 307 >gi|294950564|ref|XP_002786692.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239900985|gb|EER18488.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 69 Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 25/40 (62%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV 201 +G++GLPN GKST +T+ ++PF T+ P+ +V Sbjct: 24 MGLVGLPNVGKSTTFNVLTKCSIPAENFPFCTIDPHEAVV 63 >gi|227501251|ref|ZP_03931300.1| FeoB family ferrous iron (Fe2+) uptake protein [Anaerococcus tetradius ATCC 35098] gi|227216652|gb|EEI82056.1| FeoB family ferrous iron (Fe2+) uptake protein [Anaerococcus tetradius ATCC 35098] Length = 716 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 I + G PN+GK+T +T + ++ ++P T+ G+++ G+K+ I+ D+PGI Sbjct: 5 IALAGNPNSGKTTLFNDLTGSNQRVGNWPGVTVDKKQGVLR-GHKDIIIEDLPGI 58 >gi|262202148|ref|YP_003273356.1| GTP-binding proten HflX [Gordonia bronchialis DSM 43247] gi|262085495|gb|ACY21463.1| GTP-binding proten HflX [Gordonia bronchialis DSM 43247] Length = 484 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 18/175 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 I I + G NAGKS+ + ++T + + D F TL P + +G + + D G Sbjct: 258 IPAITVAGYTNAGKSSLVNAMTGSGVLVQDALFATLDPTTRRATLDDG-RAVVFTDTVGF 316 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSEL 269 ++ H + + F L+ +LLH+V + E + AA + +++E+ A + Sbjct: 317 VR--HLPTQLVEAFRSTLEEVVDADLLLHVVDGSDPFPAEQI-AAVRRVVNEIVA-EEKA 372 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 E++ +++ID +D+ L EL G S+ TG G+P++ + + + Sbjct: 373 DAPPEMLVINKIDAIDATRL----TELRGALGADAVFVSARTGEGLPELFDRIRE 423 >gi|199582334|gb|ACH89838.1| putative GDP binding protein [Alpheus formosus] gi|199582336|gb|ACH89839.1| putative GDP binding protein [Alpheus formosus] gi|199582338|gb|ACH89840.1| putative GDP binding protein [Alpheus formosus] gi|199582340|gb|ACH89841.1| putative GDP binding protein [Alpheus formosus] gi|199582342|gb|ACH89842.1| putative GDP binding protein [Alpheus formosus] gi|199582344|gb|ACH89843.1| putative GDP binding protein [Alpheus formosus] Length = 218 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 10/69 (14%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + L H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDALFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE 268 DEL + E Sbjct: 63 DELRLKDIE 71 >gi|199582262|gb|ACH89802.1| putative GDP binding protein [Alpheus millsae] gi|199582264|gb|ACH89803.1| putative GDP binding protein [Alpheus millsae] gi|199582266|gb|ACH89804.1| putative GDP binding protein [Alpheus millsae] gi|199582272|gb|ACH89807.1| putative GDP binding protein [Alpheus millsae] gi|199582274|gb|ACH89808.1| putative GDP binding protein [Alpheus nuttingi] gi|199582276|gb|ACH89809.1| putative GDP binding protein [Alpheus nuttingi] gi|199582278|gb|ACH89810.1| putative GDP binding protein [Alpheus nuttingi] gi|199582280|gb|ACH89811.1| putative GDP binding protein [Alpheus nuttingi] gi|199582282|gb|ACH89812.1| putative GDP binding protein [Alpheus nuttingi] Length = 218 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + + H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDAIFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE--------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 DEL + E L K +E G ++ + DT+ R K+ L + V F Sbjct: 63 DELRLKDIEYINNVWDKLYKLVERGGDKKLKP-EYDTICRVKSLLEEEKRHVRF 115 >gi|192362315|ref|YP_001981972.1| GTP-binding protein EngA [Cellvibrio japonicus Ueda107] gi|238692428|sp|B3PDM5|DER_CELJU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|190688480|gb|ACE86158.1| GTP-binding protein EngA [Cellvibrio japonicus Ueda107] Length = 466 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I I ++G PN GKST +T ++ +ADYP T G + + FI+ D GI Sbjct: 1 MIPVIALVGRPNVGKSTLFNRLTNSRDALVADYPGLTRDRKYGEARLENRRFIVIDTGGI 60 Query: 217 I--KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 + A G L E VL + S + N DEL A + + K Sbjct: 61 SGEEEGIDSAMAGQSLLAIQEADIVLFIVDSRVGLNPA-------DELIARHLRVHNKKT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 V ++ID +D D EL G+V ++ G G+ ++E Sbjct: 114 YVVANKIDGMDPDIALAPFYELG--MGEV-HPTTATHGRGVRSLME 156 >gi|30264878|ref|NP_847255.1| ferrous iron transport protein B [Bacillus anthracis str. Ames] gi|47530364|ref|YP_021713.1| ferrous iron transport protein B [Bacillus anthracis str. 'Ames Ancestor'] gi|49187694|ref|YP_030947.1| ferrous iron transport protein B [Bacillus anthracis str. Sterne] gi|165869778|ref|ZP_02214436.1| ferrous iron transport protein B [Bacillus anthracis str. A0488] gi|167633987|ref|ZP_02392310.1| ferrous iron transport protein B [Bacillus anthracis str. A0442] gi|167638127|ref|ZP_02396405.1| ferrous iron transport protein B [Bacillus anthracis str. A0193] gi|170686004|ref|ZP_02877227.1| ferrous iron transport protein B [Bacillus anthracis str. A0465] gi|170705432|ref|ZP_02895896.1| ferrous iron transport protein B [Bacillus anthracis str. A0389] gi|177651211|ref|ZP_02934042.1| ferrous iron transport protein B [Bacillus anthracis str. A0174] gi|190567108|ref|ZP_03020023.1| ferrous iron transport protein B [Bacillus anthracis Tsiankovskii-I] gi|227817605|ref|YP_002817614.1| ferrous iron transport protein B [Bacillus anthracis str. CDC 684] gi|229600262|ref|YP_002869083.1| ferrous iron transport protein B [Bacillus anthracis str. A0248] gi|254687618|ref|ZP_05151474.1| ferrous iron transport protein B [Bacillus anthracis str. CNEVA-9066] gi|254725184|ref|ZP_05186967.1| ferrous iron transport protein B [Bacillus anthracis str. A1055] gi|254736922|ref|ZP_05194628.1| ferrous iron transport protein B [Bacillus anthracis str. Western North America USA6153] gi|254741957|ref|ZP_05199644.1| ferrous iron transport protein B [Bacillus anthracis str. Kruger B] gi|254754445|ref|ZP_05206480.1| ferrous iron transport protein B [Bacillus anthracis str. Vollum] gi|254757278|ref|ZP_05209305.1| ferrous iron transport protein B [Bacillus anthracis str. Australia 94] gi|30259553|gb|AAP28741.1| ferrous iron transport protein B [Bacillus anthracis str. Ames] gi|47505512|gb|AAT34188.1| ferrous iron transport protein B [Bacillus anthracis str. 'Ames Ancestor'] gi|49181621|gb|AAT56997.1| ferrous iron transport protein B [Bacillus anthracis str. Sterne] gi|164714607|gb|EDR20126.1| ferrous iron transport protein B [Bacillus anthracis str. A0488] gi|167513944|gb|EDR89312.1| ferrous iron transport protein B [Bacillus anthracis str. A0193] gi|167530788|gb|EDR93490.1| ferrous iron transport protein B [Bacillus anthracis str. A0442] gi|170129557|gb|EDS98420.1| ferrous iron transport protein B [Bacillus anthracis str. A0389] gi|170670468|gb|EDT21208.1| ferrous iron transport protein B [Bacillus anthracis str. A0465] gi|172083037|gb|EDT68099.1| ferrous iron transport protein B [Bacillus anthracis str. A0174] gi|190561612|gb|EDV15582.1| ferrous iron transport protein B [Bacillus anthracis Tsiankovskii-I] gi|227002517|gb|ACP12260.1| ferrous iron transport protein B [Bacillus anthracis str. CDC 684] gi|229264670|gb|ACQ46307.1| ferrous iron transport protein B [Bacillus anthracis str. A0248] Length = 662 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 17/167 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 4 VALLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--KQGTLIDLPGVYDLNP 61 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + G+ FL E H +L+IV S E N+ Q + E K + I G Sbjct: 62 VSRDEGVVTNFLLTEEFQH-MLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-G 110 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 L+ ID + L+ G + +G G ++L L + Sbjct: 111 LNMIDVAKQRGIVIDVKRLSELLGVTVVPVVARSGKGCEELLATLKE 157 >gi|19553483|ref|NP_601485.1| GTP-binding protein Era [Corynebacterium glutamicum ATCC 13032] gi|25008421|sp|Q8NNB9|ERA_CORGL RecName: Full=GTPase Era gi|21325056|dbj|BAB99678.1| GTPases [Corynebacterium glutamicum ATCC 13032] Length = 305 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 16/171 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +G PN GKST ++ K I A+ P TT +P G+V + I+ D PG+ + Sbjct: 15 VSFVGRPNTGKSTLTNALVGEKIAITANQPETTRHPIRGLVHRDNAQIIVVDTPGLHR-- 72 Query: 221 HQGAGIGDRFLKHTERTHV---LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 +G+R + + T+ L+ E + + IL+ + ++ K I+G Sbjct: 73 -PRTLLGERLNEAVKDTYADVDLIGFTVPANEKIGPGDRWILEAV----RKVSPKTPILG 127 Query: 278 -LSQIDTVDSDTLARK---KNELATQCGQVPFEFSSITGHGIPQILECLHD 324 +++ D+V D +A + +EL +V SS +G + +++ + D Sbjct: 128 IITKADSVSRDLVAAQLMAVHELLGGNSEV-VPVSSTSGENVETLIKVMTD 177 >gi|308050453|ref|YP_003914019.1| ribosome-associated GTPase EngA [Ferrimonas balearica DSM 9799] gi|307632643|gb|ADN76945.1| ribosome-associated GTPase EngA [Ferrimonas balearica DSM 9799] Length = 495 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 10/133 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +T + +AD+P T G +FI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTGTRDALVADFPGLTRDRKYGQANLAGHDFIVVDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L+ E V+L +V A + AA + I L + R+K Sbjct: 60 IDGTEEGIETKMAEQSLRAIEEADVVLFLVDA-RAGLTAADEAISKHLRS-----REKRT 113 Query: 275 IVGLSQIDTVDSD 287 ++ ++ D +D+D Sbjct: 114 LLVANKTDGIDAD 126 >gi|269140141|ref|YP_003296842.1| GTP-binding protein [Edwardsiella tarda EIB202] gi|267985802|gb|ACY85631.1| GTP-binding protein [Edwardsiella tarda EIB202] gi|304559975|gb|ADM42639.1| GTP-binding protein EngA [Edwardsiella tarda FL6-60] Length = 494 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + EFI+ D GI Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVNGHEFIIIDTGGI 60 Query: 217 --IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 +N + + ++ L E ++L +V A + + A DE A + R K Sbjct: 61 DGTENGVE-THMAEQSLMAIEEADIVLFLVDARDGLLPA------DEAIARHLRSRDKAT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + ++ D +D++ + A G+V ++ G G+ Q++E Sbjct: 114 FLVANKTDGIDAEVAI--GDFYALGMGEV-HPIAASHGRGVTQLIE 156 >gi|255022237|ref|ZP_05294232.1| Ferrous iron transport protein B [Acidithiobacillus caldus ATCC 51756] gi|209574016|gb|ACI62946.1| ferrous ion uptake system FeoB [Acidithiobacillus caldus] gi|254968328|gb|EET25895.1| Ferrous iron transport protein B [Acidithiobacillus caldus ATCC 51756] Length = 771 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 33/55 (60%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 I ++G PN+GK+T ++T A ++ ++P T+ G ++ E I+ D+PG+ Sbjct: 15 IALVGNPNSGKTTLFNALTGAHQQVGNWPGVTVERREGRLRLDSGELIVVDLPGV 69 >gi|199582354|gb|ACH89848.1| putative GDP binding protein [Alpheus panamensis] gi|199582358|gb|ACH89850.1| putative GDP binding protein [Alpheus cf. malleator CRH-2008] gi|199582360|gb|ACH89851.1| putative GDP binding protein [Alpheus cf. malleator CRH-2008] Length = 218 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 10/69 (14%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + L H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDALFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE 268 DEL + E Sbjct: 63 DELRLKDIE 71 >gi|199582260|gb|ACH89801.1| putative GDP binding protein [Alpheus millsae] Length = 218 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + + H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDAIFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE--------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 DEL + E L K +E G ++ + DT+ R K+ L + V F Sbjct: 63 DELRLKDIEYINNVWDKLYKLVERGGDKKLKP-EYDTICRVKSLLEEEKRHVRF 115 >gi|297584643|ref|YP_003700423.1| GTP-binding protein Era [Bacillus selenitireducens MLS10] gi|297143100|gb|ADH99857.1| GTP-binding protein Era [Bacillus selenitireducens MLS10] Length = 302 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 ++G PN GKST L V K I +D P TT G++ + + + D PGI K H Sbjct: 12 ALVGRPNVGKSTLLNQVLGQKIAIMSDKPQTTRNRIQGVLTDERGQIVFIDTPGIHKPKH 71 Query: 222 QGAGIGDRFLKHTER-THVLLHIVSALE 248 + + + R V+L +V A E Sbjct: 72 RLGDFMTKLAQQALREVDVVLFLVDAKE 99 >gi|156044460|ref|XP_001588786.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980] gi|154694722|gb|EDN94460.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980 UF-70] Length = 381 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 196 PNLGIVKEGYKEFI--LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIV 244 PN G +G + L D+ G++ AH+G G+G++FL L+H+V Sbjct: 34 PNYGSCIDGRRSVPIELLDVAGLVPGAHEGKGLGNKFLDDLRHADALIHVV 84 >gi|49478768|ref|YP_038854.1| ferrous iron transport protein B [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49330324|gb|AAT60970.1| ferrous iron transport protein B [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 662 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 17/167 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 4 VALLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--KQGTLIDLPGVYDLNP 61 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + G+ FL E H +L+IV S E N+ Q + E K + I G Sbjct: 62 VSRDEGVVTNFLLTEEFQH-MLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-G 110 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 L+ ID + L+ G + +G G ++L L + Sbjct: 111 LNMIDVAKQRGIVIDVKRLSELLGVTVVPVVARSGKGCEELLATLKE 157 >gi|95931046|ref|ZP_01313774.1| Small GTP-binding protein domain [Desulfuromonas acetoxidans DSM 684] gi|95132942|gb|EAT14613.1| Small GTP-binding protein domain [Desulfuromonas acetoxidans DSM 684] Length = 808 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 5/102 (4%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 ++ + G PN GKST ++ +A+YP T+ VK F L D+PG + Sbjct: 3 NVALAGQPNCGKSTIFNMLSGVNQHVANYPGVTVDKKSATVKFNQHNFQLVDLPGTYSFS 62 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCI 258 + FL + E T V++++V A L N+ +Q + Sbjct: 63 MFSLEERVAKSFLLN-ETTDVIVNVVDAANLRRNLYLTFQLL 103 >gi|332970473|gb|EGK09463.1| GTP-binding protein HflX [Psychrobacter sp. 1501(2011)] Length = 491 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 2/113 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + I ++G NAGKS+ + AD F TL P L + +G +L D G + Sbjct: 199 VLTISLVGYTNAGKSSLFNRLVNENIYAADQLFATLDPTLRRLDWQGVGRVVLVDTVGFV 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 ++ H+ L+ T +LLH++ + ++ + + L+ N+++ Sbjct: 259 RHLPHELVESFHATLEETLEADLLLHVIDSASADMHEQIKAVKSVLAEINNDV 311 >gi|260433544|ref|ZP_05787515.1| GTP-binding protein HflX [Silicibacter lacuscaerulensis ITI-1157] gi|260417372|gb|EEX10631.1| GTP-binding protein HflX [Silicibacter lacuscaerulensis ITI-1157] Length = 423 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 13/178 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + ++G NAGKST +T A+ D F TL P + ++ E IL+D G I N Sbjct: 205 VALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRIELPDGPEVILSDTVGFISNL 264 Query: 221 HQGAGIGDR-FLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 R L+ +++H+ +S E QA + IL L ++ R ++E+ Sbjct: 265 PTELVAAFRATLEEVLAADLIVHVRDISHPETEEQAEDVRSILASLGVDDT--RPQLEV- 321 Query: 277 GLSQIDTV-DSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGEN 333 ++ID + D D R+ + + F S++TG GI +L + + +R E Sbjct: 322 -WNKIDLLSDED---RQAVQARAERDPAVFPISAVTGEGIDPLLTEIATILQGVRWEE 375 >gi|199582380|gb|ACH89861.1| putative GDP binding protein [Alpheus saxidomus] gi|199582382|gb|ACH89862.1| putative GDP binding protein [Alpheus saxidomus] gi|199582386|gb|ACH89864.1| putative GDP binding protein [Alpheus saxidomus] Length = 218 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 10/69 (14%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + L H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDALFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE 268 DEL + E Sbjct: 63 DELRLKDIE 71 >gi|199582378|gb|ACH89860.1| putative GDP binding protein [Alpheus malleator] Length = 218 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 10/69 (14%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + L H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDALFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE 268 DEL + E Sbjct: 63 DELRLKDIE 71 >gi|67475284|ref|XP_653339.1| nucleolar GTP-binding protein 1 [Entamoeba histolytica HM-1:IMSS] gi|56470290|gb|EAL47962.1| nucleolar GTP-binding protein 1, putative [Entamoeba histolytica HM-1:IMSS] Length = 656 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 28/54 (51%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + G PN GKS+ + +T A + Y FTT +G Y ++ + D PGI+ Sbjct: 173 LAGFPNVGKSSLMNVITNANVDVQPYAFTTKSLFIGHTDFNYTQWQVIDTPGIL 226 >gi|270156684|ref|ZP_06185341.1| putative GTP-binding protein EngA [Legionella longbeachae D-4968] gi|289164869|ref|YP_003455007.1| GTPase involved in ribosome synthesis and maintenance [Legionella longbeachae NSW150] gi|269988709|gb|EEZ94963.1| putative GTP-binding protein EngA [Legionella longbeachae D-4968] gi|288858042|emb|CBJ11902.1| GTPase involved in ribosome synthesis and maintenance [Legionella longbeachae NSW150] Length = 466 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I I ++G PN GKST +T+ + +ADYP T G + K +I+ D GI Sbjct: 1 MIPVIALVGRPNVGKSTLFNKLTKTQDALVADYPGLTRDRQYGQAQHDDKHYIVVDTGGI 60 >gi|260913735|ref|ZP_05920211.1| ribosome-associated GTPase EngA [Pasteurella dagmatis ATCC 43325] gi|260632274|gb|EEX50449.1| ribosome-associated GTPase EngA [Pasteurella dagmatis ATCC 43325] Length = 511 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 12/162 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANIAGYDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A +A ++ Y + + KI ++ Sbjct: 65 EEGVEEKMAEQSLLAIEEADVVLFLVDA-----RAGLTSADIGIANYLRQRQNKITVLVA 119 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 ++ D +D+D+ + +L G++ + ++ G G+ ++E Sbjct: 120 NKTDGIDADSHCAEFYQLG--LGEIA-QIAASQGRGVSALME 158 >gi|239944771|ref|ZP_04696708.1| putative ATP/GTP-binding protein [Streptomyces roseosporus NRRL 15998] gi|239991235|ref|ZP_04711899.1| putative ATP/GTP-binding protein [Streptomyces roseosporus NRRL 11379] gi|291448234|ref|ZP_06587624.1| ATP/GTP-binding protein [Streptomyces roseosporus NRRL 15998] gi|291351181|gb|EFE78085.1| ATP/GTP-binding protein [Streptomyces roseosporus NRRL 15998] Length = 506 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 17/170 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I G NAGKS+ L +T A + + F TL P + + + + LAD G + Sbjct: 284 VPSVAIAGYTNAGKSSLLNRLTGAGVLVENALFATLDPTVRRAETPSGRIYTLADTVGFV 343 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKI 273 ++ H ++ + ++LH+V + E AA + ++ ++ A N Sbjct: 344 RHLPHHLVEAFRSTMEEVGESDLILHVVDGSHPVPEEQLAAVREVIRDVGAVNVR----- 398 Query: 274 EIVGLSQIDTVDSDTLAR-KKNELATQCGQVPFEFSSITGHGIPQILECL 322 EIV +++ D D L R +NE + S+ TG GI ++L + Sbjct: 399 EIVVINKADAADPLVLQRLLRNE------KYAITVSARTGEGIDELLALI 442 >gi|170767411|ref|ZP_02901864.1| GTP-binding protein EngA [Escherichia albertii TW07627] gi|170123745|gb|EDS92676.1| GTP-binding protein EngA [Escherichia albertii TW07627] Length = 499 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 67 Query: 215 GIIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I +G + ++ L E V+L +V A + A DE A + R+K Sbjct: 68 G-IDGTEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREK 120 Query: 273 IEIVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 121 PTFLVANKTDGLDPD 135 >gi|123441364|ref|YP_001005351.1| GTP-binding protein Era [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332162690|ref|YP_004299267.1| GTP-binding protein Era [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|189037685|sp|A1JKK4|ERA_YERE8 RecName: Full=GTPase Era gi|122088325|emb|CAL11116.1| putative GTP-binding protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318606795|emb|CBY28293.1| GTP-binding protein Era [Yersinia enterocolitica subsp. palearctica Y11] gi|325666920|gb|ADZ43564.1| GTP-binding protein Era [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860318|emb|CBX70632.1| GTP-binding protein era homolog [Yersinia enterocolitica W22703] Length = 303 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 12 IAIVGRPNVGKSTLLNELLGQKISITSRKPQTTRHRIMGIHTEGPYQAIYVDTPGL 67 >gi|94265078|ref|ZP_01288845.1| GTP-binding protein, HSR1-related [delta proteobacterium MLMS-1] gi|93454457|gb|EAT04748.1| GTP-binding protein, HSR1-related [delta proteobacterium MLMS-1] Length = 550 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKNA 220 + ++G NAGKST L S+T ++ D F TL P ++ + E I+ D G I+ Sbjct: 385 LSLVGYTNAGKSTLLNSLTGSEIMAEDQLFATLDPTSRRLRFPEELEVIITDTVGFIR-- 442 Query: 221 HQGAGIGDRF---LKHTERTHVLLHIVSA----LEENVQAAYQ 256 H A + F L+ + VL+H+V A EE+++ Q Sbjct: 443 HLPAELLQAFKATLEELDEADVLIHVVDAANPRWEEHIRVVEQ 485 >gi|22125198|ref|NP_668621.1| GTP-binding protein Era [Yersinia pestis KIM 10] gi|45442305|ref|NP_993844.1| GTP-binding protein Era [Yersinia pestis biovar Microtus str. 91001] gi|51597205|ref|YP_071396.1| GTP-binding protein Era [Yersinia pseudotuberculosis IP 32953] gi|108808447|ref|YP_652363.1| GTP-binding protein Era [Yersinia pestis Antiqua] gi|108811370|ref|YP_647137.1| GTP-binding protein Era [Yersinia pestis Nepal516] gi|145598836|ref|YP_001162912.1| GTP-binding protein Era [Yersinia pestis Pestoides F] gi|149365389|ref|ZP_01887424.1| putative GTP-binding protein [Yersinia pestis CA88-4125] gi|153948940|ref|YP_001400118.1| GTP-binding protein Era [Yersinia pseudotuberculosis IP 31758] gi|162419723|ref|YP_001607936.1| GTP-binding protein Era [Yersinia pestis Angola] gi|165925230|ref|ZP_02221062.1| GTP-binding protein Era [Yersinia pestis biovar Orientalis str. F1991016] gi|166008313|ref|ZP_02229211.1| GTP-binding protein Era [Yersinia pestis biovar Antiqua str. E1979001] gi|166212599|ref|ZP_02238634.1| GTP-binding protein Era [Yersinia pestis biovar Antiqua str. B42003004] gi|167398745|ref|ZP_02304269.1| GTP-binding protein Era [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421165|ref|ZP_02312918.1| GTP-binding protein Era [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423101|ref|ZP_02314854.1| GTP-binding protein Era [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467391|ref|ZP_02332095.1| GTP-binding protein Era [Yersinia pestis FV-1] gi|170023436|ref|YP_001719941.1| GTP-binding protein Era [Yersinia pseudotuberculosis YPIII] gi|186896302|ref|YP_001873414.1| GTP-binding protein Era [Yersinia pseudotuberculosis PB1/+] gi|218929791|ref|YP_002347666.1| GTP-binding protein Era [Yersinia pestis CO92] gi|229838282|ref|ZP_04458441.1| membrane-associated, 16S rRNA-binding GTPase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895522|ref|ZP_04510693.1| membrane-associated, 16S rRNA-binding GTPase [Yersinia pestis Pestoides A] gi|229898846|ref|ZP_04513991.1| membrane-associated, 16S rRNA-binding GTPase [Yersinia pestis biovar Orientalis str. India 195] gi|229901620|ref|ZP_04516742.1| membrane-associated, 16S rRNA-binding GTPase [Yersinia pestis Nepal516] gi|270489809|ref|ZP_06206883.1| GTP-binding protein Era [Yersinia pestis KIM D27] gi|294504510|ref|YP_003568572.1| GTP-binding protein Era [Yersinia pestis Z176003] gi|21263587|sp|Q8ZD71|ERA_YERPE RecName: Full=GTPase Era gi|81691694|sp|Q667V2|ERA_YERPS RecName: Full=GTPase Era gi|123245663|sp|Q1C554|ERA_YERPA RecName: Full=GTPase Era gi|123373347|sp|Q1CKE3|ERA_YERPN RecName: Full=GTPase Era gi|189037686|sp|A7FFU0|ERA_YERP3 RecName: Full=GTPase Era gi|189037837|sp|A4TKX7|ERA_YERPP RecName: Full=GTPase Era gi|226741407|sp|B2KA46|ERA_YERPB RecName: Full=GTPase Era gi|226741408|sp|A9R403|ERA_YERPG RecName: Full=GTPase Era gi|226741409|sp|B1JRC8|ERA_YERPY RecName: Full=GTPase Era gi|21958063|gb|AAM84872.1|AE013732_4 GTP-binding protein [Yersinia pestis KIM 10] gi|45437169|gb|AAS62721.1| putative GTP-binding protein [Yersinia pestis biovar Microtus str. 91001] gi|51590487|emb|CAH22127.1| putative GTP-binding protein [Yersinia pseudotuberculosis IP 32953] gi|108775018|gb|ABG17537.1| GTP-binding protein [Yersinia pestis Nepal516] gi|108780360|gb|ABG14418.1| putative GTP-binding protein [Yersinia pestis Antiqua] gi|115348402|emb|CAL21338.1| putative GTP-binding protein [Yersinia pestis CO92] gi|145210532|gb|ABP39939.1| GTP-binding protein [Yersinia pestis Pestoides F] gi|149291802|gb|EDM41876.1| putative GTP-binding protein [Yersinia pestis CA88-4125] gi|152960435|gb|ABS47896.1| GTP-binding protein Era [Yersinia pseudotuberculosis IP 31758] gi|162352538|gb|ABX86486.1| GTP-binding protein Era [Yersinia pestis Angola] gi|165922837|gb|EDR39988.1| GTP-binding protein Era [Yersinia pestis biovar Orientalis str. F1991016] gi|165992695|gb|EDR44996.1| GTP-binding protein Era [Yersinia pestis biovar Antiqua str. E1979001] gi|166206530|gb|EDR51010.1| GTP-binding protein Era [Yersinia pestis biovar Antiqua str. B42003004] gi|166960654|gb|EDR56675.1| GTP-binding protein Era [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051249|gb|EDR62657.1| GTP-binding protein Era [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057271|gb|EDR67017.1| GTP-binding protein Era [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749970|gb|ACA67488.1| GTP-binding protein Era [Yersinia pseudotuberculosis YPIII] gi|186699328|gb|ACC89957.1| GTP-binding protein Era [Yersinia pseudotuberculosis PB1/+] gi|229681549|gb|EEO77643.1| membrane-associated, 16S rRNA-binding GTPase [Yersinia pestis Nepal516] gi|229688394|gb|EEO80465.1| membrane-associated, 16S rRNA-binding GTPase [Yersinia pestis biovar Orientalis str. India 195] gi|229694648|gb|EEO84695.1| membrane-associated, 16S rRNA-binding GTPase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701328|gb|EEO89356.1| membrane-associated, 16S rRNA-binding GTPase [Yersinia pestis Pestoides A] gi|262362498|gb|ACY59219.1| GTP-binding protein Era [Yersinia pestis D106004] gi|262366497|gb|ACY63054.1| GTP-binding protein Era [Yersinia pestis D182038] gi|270338313|gb|EFA49090.1| GTP-binding protein Era [Yersinia pestis KIM D27] gi|294354969|gb|ADE65310.1| GTP-binding protein Era [Yersinia pestis Z176003] gi|320016074|gb|ADV99645.1| membrane-associated, 16S rRNA-binding GTPase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 303 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 12 IAIVGRPNVGKSTLLNELLGQKISITSRKPQTTRHRIMGIHTEGPYQAIYVDTPGL 67 >gi|317129116|ref|YP_004095398.1| GTP-binding proten HflX [Bacillus cellulosilyticus DSM 2522] gi|315474064|gb|ADU30667.1| GTP-binding proten HflX [Bacillus cellulosilyticus DSM 2522] Length = 420 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 I ++G NAGKST L ++ A + D F TL P +K E +L D G I+ Sbjct: 198 ISLVGYTNAGKSTLLHRLSEADIYVEDQLFATLDPTTKKIKLPSGMEVLLTDTVGFIQQL 257 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSA 246 R L+ + ++LH+V A Sbjct: 258 PTTLIAAFRSTLEEVKEADLILHVVDA 284 >gi|238916517|ref|YP_002930034.1| ferrous iron transport protein B [Eubacterium eligens ATCC 27750] gi|238871877|gb|ACR71587.1| ferrous iron transport protein B [Eubacterium eligens ATCC 27750] Length = 834 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K G+K+ + D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLK-GHKDVTIMDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R ER +++IV + +E N+ + Q + EL + I+ + Sbjct: 64 YTLEEVVARNYLINERPDAIINIVDGTNIERNLYLSTQIM---------ELGIPV-IMAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D ++ + +L G E S++ G GI + E Sbjct: 114 NMVDIMEKNGDKVDLAKLGKNLGCEAVEISALKGTGIKEAAE 155 >gi|315185968|gb|EFU19732.1| GTP-binding proten HflX [Spirochaeta thermophila DSM 6578] Length = 408 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 9/115 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGII 217 I + ++G NAGKS+ +T +I D PF TL + G+ +++D G I Sbjct: 197 IPRVSLVGYTNAGKSSLFTRLTGQAVRIQDRPFVTLDTTTRTCLIPGWGRVVVSDTVGFI 256 Query: 218 KNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENV---QAAYQCILDELSAYN 266 + H + D F L+ H+LL +V N+ + + +L E+ A++ Sbjct: 257 Q--HLPHTLVDAFHATLEEVRDAHLLLEVVDLSSPNLLLHLSTTEEVLTEIGAHH 309 >gi|300853996|ref|YP_003778980.1| putative ras-like GTP-binding protein [Clostridium ljungdahlii DSM 13528] gi|300434111|gb|ADK13878.1| predicted ras-like GTP-binding protein [Clostridium ljungdahlii DSM 13528] Length = 293 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 4/75 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I IIG PN GKST L ++ K I P TT I+ E + + D PGI K Sbjct: 7 ITIIGRPNVGKSTLLNNIMGEKLSIVSCRPQTTRNSIQTILTEDDFQLVFVDTPGIHKPK 66 Query: 221 HQGAGIGDRFLKHTE 235 H+ +GD +K E Sbjct: 67 HK---LGDYMVKAAE 78 >gi|229521287|ref|ZP_04410707.1| GTP-binding protein Era [Vibrio cholerae TM 11079-80] gi|229341819|gb|EEO06821.1| GTP-binding protein Era [Vibrio cholerae TM 11079-80] Length = 324 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L ++ K I P TT + +G+ EG + I D PG+ Sbjct: 33 VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETEGKYQAIYVDTPGL 88 >gi|160945712|ref|ZP_02092938.1| hypothetical protein FAEPRAM212_03244 [Faecalibacterium prausnitzii M21/2] gi|158443443|gb|EDP20448.1| hypothetical protein FAEPRAM212_03244 [Faecalibacterium prausnitzii M21/2] Length = 728 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 18/158 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K G K+ ++ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNNLTGSNQYVGNWPGVTVEKKEGKLK-GDKDVVIQDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ +L+I+ + +E N+ Q I EL + ++ + Sbjct: 64 YTLEEVVSRTYLVKEKPDAILNIIDGTNIERNLYLTTQLI---------ELGIPV-VMAV 113 Query: 279 SQIDTV--DSDTLARKKNELATQCGQVPFEFSSITGHG 314 + ID V + D + KK L+ + G E S++ G G Sbjct: 114 NMIDLVRKNGDKIDLKK--LSAELGCQAVEISALKGEG 149 >gi|82523900|emb|CAI78623.1| ferrous ion uptake system protein FeoB (predicted GTPase) [uncultured delta proteobacterium] Length = 693 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 15/162 (9%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NAH 221 +IG PN+GK+T +T A+ K+ ++ T+ G ++ + + D+PG A+ Sbjct: 15 ALIGNPNSGKTTIFNEITGARQKVGNWAGVTVEKKEGYIEHKGHKIEITDLPGTYSLTAY 74 Query: 222 QGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 I R E+ V++ ++ S++E ++ A Q I EL K+ I L+ Sbjct: 75 SIEEIVSRNFILDEKPDVVIDVIDSSSIERSLYLATQLI---------ELDIKL-IFALN 124 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSS-ITGHGIPQILE 320 +D S + LA G VP F+ G G+ +LE Sbjct: 125 MMDIAISKGYQINRERLAELLG-VPVVFTVGNKGSGVDDLLE 165 >gi|47567984|ref|ZP_00238690.1| ferrous iron transport protein B [Bacillus cereus G9241] gi|47555287|gb|EAL13632.1| ferrous iron transport protein B [Bacillus cereus G9241] Length = 662 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 17/167 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 4 VALLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--KQGTLIDLPGVYDLNP 61 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + G+ FL E H +L+IV S E N+ Q + E K + I G Sbjct: 62 VSRDEGVVTNFLLTEEFQH-MLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-G 110 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 L+ ID + L+ G + +G G ++L L + Sbjct: 111 LNMIDVAKQRGIVIDVKRLSELLGVTVVPVVARSGKGCEELLATLKE 157 >gi|331658656|ref|ZP_08359600.1| ribosome-associated GTPase EngA [Escherichia coli TA206] gi|331054321|gb|EGI26348.1| ribosome-associated GTPase EngA [Escherichia coli TA206] Length = 396 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 12 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 71 Query: 215 GIIKNAHQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 72 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPA------DEAIAKHLRSREK 124 Query: 273 IEIVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 125 PTFLVANKTDGLDPD 139 >gi|300741536|ref|ZP_07071557.1| GTP-binding protein Era [Rothia dentocariosa M567] gi|311113629|ref|YP_003984851.1| GTP-binding protein Era [Rothia dentocariosa ATCC 17931] gi|300380721|gb|EFJ77283.1| GTP-binding protein Era [Rothia dentocariosa M567] gi|310945123|gb|ADP41417.1| GTP-binding protein Era [Rothia dentocariosa ATCC 17931] Length = 372 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + ++G PNAGKST ++ K I + P TT + GIV + IL D PGI Sbjct: 22 VSLVGRPNAGKSTLTNALVGQKVAITSSRPQTTRHTIRGIVHRDDYQLILVDTPGI 77 >gi|270488155|ref|ZP_06205229.1| small GTP-binding protein domain protein [Yersinia pestis KIM D27] gi|270336659|gb|EFA47436.1| small GTP-binding protein domain protein [Yersinia pestis KIM D27] Length = 174 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 37/164 (22%), Positives = 70/164 (42%), Gaps = 17/164 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 IG+IG PNAGK+T +T A+ ++ ++ T+ G + L D+PG + Sbjct: 6 IGLIGNPNAGKTTLFNQLTGARQRVGNWAGVTVERKEGHFNTAQHQVTLVDLPGTYSLTT 65 Query: 220 AHQGAGIGDRFLKH---TERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + + ++ H + +L++++ A LE N+ Q + + Sbjct: 66 ISEQTSLDEQIACHYILSGEADLLINVIDAVNLERNLYLTLQLLELGIPC---------- 115 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 IV L+ +D +S + N L+ + G S G GI ++ Sbjct: 116 IVALNMLDIAESQHIEIDINTLSKKLGCPVIPLVSTRGRGIDEL 159 >gi|256016489|emb|CAR63540.1| putative Uncharacterized GTP-binding protein [Angiostrongylus cantonensis] Length = 390 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN 219 D+ +IG PN GKS + RA T N+ I+ E + IL D PG + Sbjct: 36 DVAVIGAPNVGKSLLTNQLVRAAVSSVSSKMDTTVQNVNAILTEDNVQLILVDSPGTVGQ 95 Query: 220 AH 221 H Sbjct: 96 RH 97 >gi|229514086|ref|ZP_04403548.1| GTP-binding protein Era [Vibrio cholerae TMA 21] gi|229349267|gb|EEO14224.1| GTP-binding protein Era [Vibrio cholerae TMA 21] Length = 324 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L ++ K I P TT + +G+ EG + I D PG+ Sbjct: 33 VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETEGKYQAIYVDTPGL 88 >gi|199582384|gb|ACH89863.1| putative GDP binding protein [Alpheus saxidomus] Length = 218 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 10/69 (14%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + L H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDALFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE 268 DEL + E Sbjct: 63 DELRLKDIE 71 >gi|153214498|ref|ZP_01949407.1| GTP-binding protein Era [Vibrio cholerae 1587] gi|153803091|ref|ZP_01957677.1| GTP-binding protein Era [Vibrio cholerae MZO-3] gi|153826892|ref|ZP_01979559.1| GTP-binding protein Era [Vibrio cholerae MZO-2] gi|153830876|ref|ZP_01983543.1| GTP-binding protein Era [Vibrio cholerae 623-39] gi|229524447|ref|ZP_04413852.1| GTP-binding protein Era [Vibrio cholerae bv. albensis VL426] gi|229527068|ref|ZP_04416463.1| GTP-binding protein Era [Vibrio cholerae 12129(1)] gi|254226245|ref|ZP_04919838.1| GTP-binding protein Era [Vibrio cholerae V51] gi|254291660|ref|ZP_04962448.1| GTP-binding protein Era [Vibrio cholerae AM-19226] gi|262190710|ref|ZP_06048941.1| GTP-binding protein Era [Vibrio cholerae CT 5369-93] gi|297581084|ref|ZP_06943009.1| GTP-binding protein Era [Vibrio cholerae RC385] gi|124115300|gb|EAY34120.1| GTP-binding protein Era [Vibrio cholerae 1587] gi|124121373|gb|EAY40116.1| GTP-binding protein Era [Vibrio cholerae MZO-3] gi|125621218|gb|EAZ49559.1| GTP-binding protein Era [Vibrio cholerae V51] gi|148873645|gb|EDL71780.1| GTP-binding protein Era [Vibrio cholerae 623-39] gi|149739255|gb|EDM53517.1| GTP-binding protein Era [Vibrio cholerae MZO-2] gi|150422432|gb|EDN14391.1| GTP-binding protein Era [Vibrio cholerae AM-19226] gi|229335465|gb|EEO00947.1| GTP-binding protein Era [Vibrio cholerae 12129(1)] gi|229338028|gb|EEO03045.1| GTP-binding protein Era [Vibrio cholerae bv. albensis VL426] gi|262033422|gb|EEY51929.1| GTP-binding protein Era [Vibrio cholerae CT 5369-93] gi|297534910|gb|EFH73746.1| GTP-binding protein Era [Vibrio cholerae RC385] Length = 324 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L ++ K I P TT + +G+ EG + I D PG+ Sbjct: 33 VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETEGKYQAIYVDTPGL 88 >gi|291618445|ref|YP_003521187.1| Era [Pantoea ananatis LMG 20103] gi|291153475|gb|ADD78059.1| Era [Pantoea ananatis LMG 20103] gi|327394841|dbj|BAK12263.1| GTP-binding protein Era [Pantoea ananatis AJ13355] Length = 301 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 VAIVGRPNVGKSTLLNQLLGQKVSITSRKPQTTRHRIMGIHTEGAYQAIYVDTPGL 66 >gi|257083555|ref|ZP_05577916.1| Fe2+ transport system protein B [Enterococcus faecalis Fly1] gi|256991585|gb|EEU78887.1| Fe2+ transport system protein B [Enterococcus faecalis Fly1] Length = 716 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 14/163 (8%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 I + G PN+GK+T +T A + ++P T+ G+ K+ K I+ D+PGI + Sbjct: 4 QIALAGNPNSGKTTTFNMLTGANQYVGNWPGVTVERKEGVAKKD-KTLIIQDLPGIYSLS 62 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + I R ++ V+L+I V+ LE N+ Q I L + Sbjct: 63 PYTPEEIVARDYLLEDQPSVILNILDVTNLERNLYLTTQLIETGLPV----------VCA 112 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 L+ +D ++ + +L+ G E S++ G+ L+ Sbjct: 113 LNMMDLLEKNGQTLNSEKLSYGLGVPVVEISALKNRGLDHALK 155 >gi|238063470|ref|ZP_04608179.1| small GTP-binding protein [Micromonospora sp. ATCC 39149] gi|237885281|gb|EEP74109.1| small GTP-binding protein [Micromonospora sp. ATCC 39149] Length = 507 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 6/136 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGIIKN 219 + I G NAGKS+ L +T A + D F TL P +G + + L+D G +++ Sbjct: 281 VAIAGYTNAGKSSLLNRLTGAGVLVEDALFATLDPTTRKATAPDG-RIYTLSDTVGFVRH 339 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 HQ L+ +++H+V + + + + + L+ ++ + E++ + Sbjct: 340 LPHQIVEAFRSTLEEVAEADLVVHVVDGAHPDPEEQVRAVREVLAEVGAD--RLPELLVI 397 Query: 279 SQIDTVDSDTLARKKN 294 ++ D D +TL R K Sbjct: 398 NKTDAADEETLLRLKR 413 >gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] gi|149811066|gb|EDM70903.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] Length = 425 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 20/168 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE--GYKEFILADIPGIIKN 219 + ++G NAGKST +T A D F TL P + ++ G E IL+D G I + Sbjct: 206 VALVGYTNAGKSTLFNRMTGADVMAKDMLFATLDPTMRRIELPGGGPEVILSDTVGFISD 265 Query: 220 AHQGAGIGDR-FLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEI 275 R L+ +++H+ +S E QA + IL+ L +S +IE+ Sbjct: 266 LPTELVAAFRATLEEVLAADLIVHVRDISHPESEAQARDVRTILESLGVRDSI--PQIEV 323 Query: 276 VGLSQIDTVDSDT----LARKKNELATQCGQVPFEFSSITGHGIPQIL 319 ++ID +D +T L R Q S++TG G+ +++ Sbjct: 324 --WNKIDKLDDETRQAVLTRAARHEHVQA------LSAVTGEGMSELV 363 >gi|149204767|ref|ZP_01881730.1| GTP-binding protein HflX [Roseovarius sp. TM1035] gi|149141736|gb|EDM29789.1| GTP-binding protein HflX [Roseovarius sp. TM1035] Length = 424 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--EGYKEFILADIPGIIKN 219 + ++G NAGKST +T A D F TL P + V EG E IL+D G I + Sbjct: 205 VALVGYTNAGKSTLFNRLTGADVMAKDMLFATLDPTMRRVNLPEGGPEVILSDTVGFISD 264 >gi|145295845|ref|YP_001138666.1| GTPase [Corynebacterium glutamicum R] gi|140845765|dbj|BAF54764.1| hypothetical protein [Corynebacterium glutamicum R] Length = 509 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 19/170 (11%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPG 215 L+ I I G NAGKS+ + ++T A + + F TL P + +G + + D G Sbjct: 280 LVPQIAIAGYTNAGKSSLINAMTGAGVLVENALFATLDPTTRKAELADG-RHVVFTDTVG 338 Query: 216 IIKNAHQGAGIGDRF---LKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSE 268 ++ H + + F L+ ++LH+V + + + A I D + + + Sbjct: 339 FVR--HLPTSLVEAFKSTLEEVVEADLMLHVVDGSDPFPLKQIDAVNTVISDIVRSTGAV 396 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 EI+ +++ID D TLA EL V F S++TG GI ++ Sbjct: 397 --PPPEIIVVNKIDQADPLTLA----ELRHAVDDVVF-VSALTGEGIKEL 439 >gi|304414053|ref|ZP_07395421.1| GTP-binding protein [Candidatus Regiella insecticola LSR1] gi|304283267|gb|EFL91663.1| GTP-binding protein [Candidatus Regiella insecticola LSR1] Length = 491 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + ++D+P T G + EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNHLTRTRSALVSDFPGLTRDRQYGRAEFESHEFIVIDTGG- 59 Query: 217 IKNAHQGAG--IGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 + QG + + L E ++L IV + A Q I L R+K Sbjct: 60 VDGTEQGVETLMASQALLAIEEADIVLFIVDG-RAGMLPADQEITQHLRN-----RQKST 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +++ D ++SD+ L G+V + ++ G G+ Q+LE Sbjct: 114 FLLVNKTDGINSDSAIADFYSLG--LGEV-YAIAASHGRGVAQLLE 156 >gi|300717986|ref|YP_003742789.1| GTP-binding protein [Erwinia billingiae Eb661] gi|299063822|emb|CAX60942.1| GTP-binding protein [Erwinia billingiae Eb661] Length = 301 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 IAIVGRPNVGKSTLLNQLLGQKISITSRKPQTTRHRIMGIHTEGPYQAIYVDTPGL 66 >gi|261211554|ref|ZP_05925842.1| GTP-binding protein Era [Vibrio sp. RC341] gi|260839509|gb|EEX66135.1| GTP-binding protein Era [Vibrio sp. RC341] Length = 324 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L ++ K I P TT + +G+ EG + I D PG+ Sbjct: 33 VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETEGKYQAIYVDTPGL 88 >gi|320100421|ref|YP_004176013.1| small GTP-binding protein [Desulfurococcus mucosus DSM 2162] gi|319752773|gb|ADV64531.1| small GTP-binding protein [Desulfurococcus mucosus DSM 2162] Length = 695 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGI 216 + + IG PN GKS+ VT++ ++ ++P T+ N G V +GYK IL D+PGI Sbjct: 5 VIKVLFIGQPNVGKSSIFNMVTKSHVEVGNWPGKTVAVNKGEVSFKGYK-LILYDLPGI 62 >gi|227537544|ref|ZP_03967593.1| GTP-binding protein Era [Sphingobacterium spiritivorum ATCC 33300] gi|227242596|gb|EEI92611.1| GTP-binding protein Era [Sphingobacterium spiritivorum ATCC 33300] Length = 292 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + IIG PNAGKST + ++ K I TT + +GIV + + + +D PG+IK Sbjct: 8 VSIIGKPNAGKSTLMNALVGEKMSIITPKAQTTRHRIIGIVNDENHQIVFSDTPGVIK 65 >gi|62390780|ref|YP_226182.1| GTPase [Corynebacterium glutamicum ATCC 13032] gi|41326118|emb|CAF20281.1| GTPase [Corynebacterium glutamicum ATCC 13032] Length = 509 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 19/170 (11%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPG 215 L+ I I G NAGKS+ + ++T A + + F TL P + +G + + D G Sbjct: 280 LVPQIAIAGYTNAGKSSLINAMTGAGVLVENALFATLDPTTRKAELADG-RHVVFTDTVG 338 Query: 216 IIKNAHQGAGIGDRF---LKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSE 268 ++ H + + F L+ ++LH+V + + + A I D + + + Sbjct: 339 FVR--HLPTSLVEAFKSTLEEVVEADLMLHVVDGSDPFPLKQIDAVNTVISDIVRSTGAV 396 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 EI+ +++ID D TLA EL V F S++TG GI ++ Sbjct: 397 --PPPEIIVVNKIDQADPLTLA----ELRHAVDDVVF-VSALTGEGIKEL 439 >gi|103488464|ref|YP_618025.1| ferrous iron transport protein B [Sphingopyxis alaskensis RB2256] gi|98978541|gb|ABF54692.1| ferrous iron transport protein B [Sphingopyxis alaskensis RB2256] Length = 619 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 11/63 (17%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI------LAD 212 I I ++G PNAGKS+ ++T A+ KIA+YP T+ K G+ F L D Sbjct: 5 IPSIALVGNPNAGKSSLFNALTGARQKIANYPGVTVER-----KAGHASFADGRPLSLID 59 Query: 213 IPG 215 +PG Sbjct: 60 LPG 62 >gi|323705744|ref|ZP_08117317.1| ferrous iron transport protein B [Thermoanaerobacterium xylanolyticum LX-11] gi|323534962|gb|EGB24740.1| ferrous iron transport protein B [Thermoanaerobacterium xylanolyticum LX-11] Length = 604 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 18/170 (10%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNA 220 +IG PN GK+T +T + ++P T+ G + + K + D+PGI + Sbjct: 13 ALIGNPNVGKTTLFNLLTGLNQHVGNWPGVTVEKKEGFINDNVK---IVDLPGIYAMDTY 69 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 I FL+ + +L+IV A L+ N+ Q L +N + I+ L Sbjct: 70 SNEEKISKSFLE-SGNVDFILNIVDASNLKRNLYLTMQ-----LKEFNIPI-----ILIL 118 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFS 328 + +D + EL+ G + + G G+ +I E L + IFS Sbjct: 119 NMVDVAKKKGIKIDYVELSKLLGVMVVPIVASKGKGVDEIKELLSNDIFS 168 >gi|295695440|ref|YP_003588678.1| GTP-binding protein Era [Bacillus tusciae DSM 2912] gi|295411042|gb|ADG05534.1| GTP-binding protein Era [Bacillus tusciae DSM 2912] Length = 300 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 17/171 (9%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 ++G PN GKST L + K I +D P TT G++ + I D PG+ + H Sbjct: 13 ALVGRPNVGKSTLLNRLIGTKIAIMSDKPQTTRNRIRGVLTRENGQVIFLDTPGVHRPKH 72 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQI 281 + +R T + L+ V + Q ILD L + + + +++I Sbjct: 73 RLGDYMNRLALATLQEVDLVLFVIDVTSKFGPGEQVILDHLQGVETPV-----FLVINKI 127 Query: 282 DTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHDKIFS 328 D V + L +E + PF S++ G L+ L ++IF+ Sbjct: 128 DLVSPEELLPMIDE---HRKRYPFREVVPVSAVKGTN----LDRLEERIFA 171 >gi|259046633|ref|ZP_05737034.1| GTP-binding protein HflX [Granulicatella adiacens ATCC 49175] gi|259036798|gb|EEW38053.1| GTP-binding protein HflX [Granulicatella adiacens ATCC 49175] Length = 400 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 16/94 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTT---------LYPNLGIVKEGYKEFILAD 212 +G+IG NAGKST L +T+A D F T L+PN + FI D Sbjct: 198 LGLIGYTNAGKSTILNQLTQAGTYQMDQLFATLDPLTRQVDLFPNFEVTLTDTVGFI-QD 256 Query: 213 IPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 +P + +A + L+ + +L+H+V A Sbjct: 257 LPTTLIHAFEST------LEESADVDLLVHVVDA 284 >gi|199582396|gb|ACH89869.1| putative GDP binding protein [Alpheus simus] gi|199582398|gb|ACH89870.1| putative GDP binding protein [Alpheus schmitti] gi|199582400|gb|ACH89871.1| putative GDP binding protein [Alpheus schmitti] gi|199582402|gb|ACH89872.1| putative GDP binding protein [Alpheus schmitti] gi|199582404|gb|ACH89873.1| putative GDP binding protein [Alpheus schmitti] gi|199582406|gb|ACH89874.1| putative GDP binding protein [Alpheus schmitti] Length = 218 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + + H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDAIFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE--------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 DEL + E L K +E G ++ + DT+ R K+ L + V F Sbjct: 63 DELRLKDIEYINNVYDKLYKLVERGGDKKLKP-EYDTICRVKSLLEEEKRHVRF 115 >gi|331005110|ref|ZP_08328513.1| GTP-binding protein HflX [gamma proteobacterium IMCC1989] gi|330421079|gb|EGG95342.1| GTP-binding protein HflX [gamma proteobacterium IMCC1989] Length = 451 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 26/179 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + ++G NAGKST +T A D F TL P + + + +LAD G I + Sbjct: 201 VSLVGYTNAGKSTLFNHITDAGVYAEDKLFATLDPTMRQINLPNVGKAVLADTVGFI--S 258 Query: 221 HQGAGIGDRF---LKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAYN-SELRKK 272 H + D F L+ + +LLH++ A +E N++ Q +L E+ A + +L+ Sbjct: 259 HLPHRLIDAFRATLEEAAHSSLLLHVIDAADEERPRNIEQV-QEVLTEIGAADLPQLKIY 317 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQIL----ECLHDKIF 327 +I L +D D V S+ TG G+ + ECL D++ Sbjct: 318 NKIDLLEHAPRIDRD----------EHGVPVAVWLSAQTGEGVELMFEALAECLGDRMI 366 >gi|327484952|gb|AEA79359.1| GTP-binding protein Era [Vibrio cholerae LMA3894-4] Length = 325 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L ++ K I P TT + +G+ EG + I D PG+ Sbjct: 34 VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETEGKYQAIYVDTPGL 89 >gi|300726753|ref|ZP_07060183.1| GTP-binding protein Era [Prevotella bryantii B14] gi|299775866|gb|EFI72446.1| GTP-binding protein Era [Prevotella bryantii B14] Length = 293 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 8/92 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + + + IA + TT + +GIV + + + +D PG++K Sbjct: 7 VNIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNDDDCQIVFSDTPGVLKPN 66 Query: 221 HQGAGIGDRFLKHTER----THVLLHIVSALE 248 ++ + + L +E VLL++ +E Sbjct: 67 YK---MQEMMLAFSESALADADVLLYVTDVIE 95 >gi|326441004|ref|ZP_08215738.1| GTPase Era [Streptomyces clavuligerus ATCC 27064] Length = 314 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 11/132 (8%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I ++ P TT + GIV + IL D PG+ K Sbjct: 21 VGRPNAGKSTLTNALVGQKVAITSNRPQTTRHTVRGIVHRPEAQLILVDTPGLHKPR--- 77 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ ++ + + I EL+ ++K ++ +++ Sbjct: 78 TLLGERLNDVVRTTWAEVDVIGFCLPADQKLGPGDRFIAKELAG----IKKTPKVAIVTK 133 Query: 281 IDTVDSDTLARK 292 D VDS TLA + Sbjct: 134 TDLVDSRTLAEQ 145 >gi|199582306|gb|ACH89824.1| putative GDP binding protein [Alpheus utriensis] gi|199582308|gb|ACH89825.1| putative GDP binding protein [Alpheus utriensis] gi|199582312|gb|ACH89827.1| putative GDP binding protein [Alpheus utriensis] gi|199582314|gb|ACH89828.1| putative GDP binding protein [Alpheus utriensis] gi|199582316|gb|ACH89829.1| putative GDP binding protein [Alpheus utriensis] Length = 218 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + + H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDAIFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE--------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 DEL + E L K +E G ++ + DT+ R K+ L + V F Sbjct: 63 DELRLKDIEYINNVWDKLYKLVERGGDKKLKP-EYDTICRVKSLLEEEKRHVRF 115 >gi|220908205|ref|YP_002483516.1| ferrous iron transport protein B [Cyanothece sp. PCC 7425] gi|219864816|gb|ACL45155.1| ferrous iron transport protein B [Cyanothece sp. PCC 7425] Length = 597 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 5/100 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I ++G+PN GKSTF T A I ++ T+ + +K G + D+PGI ++ Sbjct: 4 IAVLGMPNTGKSTFFNRFTGATASIGNWAGITVDLMIATLKVGDTLTEVIDLPGIYDLRG 63 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQC 257 Q + +FL+ T H+++ I++A L+ + A Q Sbjct: 64 FSQDELVVQQFLESTP-LHLVVVILNAAQLDRQLSLALQV 102 >gi|167987248|gb|ACA13296.1| Hflx [Listonella anguillarum] Length = 279 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I I ++G NAGKST +T A AD F TL P L ++ +LAD G I Sbjct: 197 IPTISLVGYTNAGKSTLFNRITEAGVYAADQLFATLDPTLRKIELADVGTAVLADTVGFI 256 Query: 218 KN 219 ++ Sbjct: 257 RH 258 >gi|218906040|ref|YP_002453874.1| ferrous iron transport protein B [Bacillus cereus AH820] gi|218538173|gb|ACK90571.1| ferrous iron transport protein B [Bacillus cereus AH820] Length = 662 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 17/167 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 4 VALLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--KQGTLIDLPGVYDLNP 61 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + G+ FL E H +L+IV S E N+ Q + E K + I G Sbjct: 62 VSRDEGVVTNFLLTEEFQH-MLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-G 110 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 L+ ID + L+ G + +G G ++L L + Sbjct: 111 LNMIDVAKQRGIVIDVKRLSELLGVTVVPVVARSGKGCEELLATLKE 157 >gi|307719724|ref|YP_003875256.1| hypothetical protein STHERM_c20490 [Spirochaeta thermophila DSM 6192] gi|306533449|gb|ADN02983.1| hypothetical protein STHERM_c20490 [Spirochaeta thermophila DSM 6192] Length = 408 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 9/115 (7%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGII 217 I + ++G NAGKS+ +T +I D PF TL + G+ +++D G I Sbjct: 197 IPRVSLVGYTNAGKSSLFTRLTGQAVRIQDRPFVTLDTTTRTCLIPGWGRVVVSDTVGFI 256 Query: 218 KNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENV---QAAYQCILDELSAYN 266 + H + D F L+ H+LL +V N+ + + +L E+ A++ Sbjct: 257 Q--HLPHTLVDAFHATLEEVRDAHLLLEVVDLSSPNLLLHLSTTEEVLTEIGAHH 309 >gi|302390344|ref|YP_003826165.1| GTP-binding proten HflX [Thermosediminibacter oceani DSM 16646] gi|302200972|gb|ADL08542.1| GTP-binding proten HflX [Thermosediminibacter oceani DSM 16646] Length = 417 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 15/149 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 I ++G NAGKST + ++T A D F TL P ++ + +L+D G I+ Sbjct: 198 ISLVGYTNAGKSTLMNALTGAGVSSNDRLFDTLDPTTRALLLPDGRRVLLSDTVGFIRKL 257 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKIEI 275 H+ L+ + +L+H+V A +E + + + +L E+ A N I Sbjct: 258 PHEIVEAFKATLEEVKEADLLIHVVDASSPKADEEI-STVKSVLKEIGAENIP-----TI 311 Query: 276 VGLSQIDTVDSDTLARKKN---ELATQCG 301 + L++ID V+ L + E++ CG Sbjct: 312 LALNKIDRVNHRELITGEENVVEISALCG 340 >gi|291547023|emb|CBL20131.1| ferrous iron transporter FeoB [Ruminococcus sp. SR1/5] Length = 727 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 36/162 (22%), Positives = 76/162 (46%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T A + ++P T+ G +K K+ + D+PGI + Sbjct: 5 IALAGNPNCGKTTMFNALTGANQYVGNWPGVTVEKKEGKLKN-QKDVTVTDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ V++ +V A +E N+ A Q + E+ + ++ L Sbjct: 64 YTLEEVVSRDYLLKEKPDVIIDLVDATNIERNLYLATQLL---------EIGIPV-VIAL 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + +D + + + L++ G E S++ G G+ ++++ Sbjct: 114 NMVDLLKKNNIHINVKGLSSALGCPIVETSALKGTGLKEVVD 155 >gi|297565483|ref|YP_003684455.1| GTP-binding protein Era [Meiothermus silvanus DSM 9946] gi|296849932|gb|ADH62947.1| GTP-binding protein Era [Meiothermus silvanus DSM 9946] Length = 297 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L ++ K I+ P TT GI EG ++ + D PG+ Sbjct: 11 VAIVGKPNVGKSTLLNALLGVKVAPISPKPQTTRKRIRGIYSEGNRQIVFVDTPGV 66 >gi|78778772|ref|YP_396884.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9312] gi|123554591|sp|Q31CE7|DER_PROM9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|78712271|gb|ABB49448.1| Small GTP-binding protein domain [Prochlorococcus marinus str. MIT 9312] Length = 457 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 31/177 (17%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI--IK 218 + IIG PN GKS+ L S++ K I +D TT ++K+G ++ + D GI K Sbjct: 179 MSIIGRPNVGKSSLLNSISGEKRAIVSDISGTTTDSIDTLIKKGDTQWKIVDTAGIRRKK 238 Query: 219 NAHQGA---GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE- 274 N G GI +R K +R+ V + ++ A +D ++ + +L +IE Sbjct: 239 NVKYGTEFFGI-NRAFKSIDRSDVCVLVIDA------------IDGVTDQDQKLAGRIEE 285 Query: 275 -----IVGLSQIDTVD--SDTLARKKNELATQCGQVPFE----FSSITGHGIPQILE 320 I+ +++ D V+ S T+ + + EL ++ + + S++TG + I E Sbjct: 286 QGRACIIVINKWDLVEKNSSTIYQVEKELRSKLYFLHWSKMIFISALTGQRVDNIFE 342 >gi|55822578|ref|YP_141019.1| ferrous ion transport protein B [Streptococcus thermophilus CNRZ1066] gi|55738563|gb|AAV62204.1| ferrous ion transport protein B [Streptococcus thermophilus CNRZ1066] Length = 712 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 76/166 (45%), Gaps = 16/166 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + +I +IG PN+GK++ +T ++ ++P T+ G+VK+ K+ + D+PGI Sbjct: 1 MTEIALIGNPNSGKTSLFNLITGHNQRVGNWPGVTVERKSGLVKKN-KDLEIQDLPGIYS 59 Query: 219 NAHQGA--GIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + + +L ++R +L++V A LE N+ Q I + Sbjct: 60 MSPYSPEEKVARDYL-LSQRADSILNVVDATNLERNLYLTTQLIETGIPV---------- 108 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + L+ ID +D ++L+ G S++ G+ Q+++ Sbjct: 109 TIALNMIDVLDGQGKKINVDKLSYHLGVPVVATSALKQTGVDQVVK 154 >gi|327460961|gb|EGF07294.1| GTP-binding protein Era [Streptococcus sanguinis SK1057] Length = 299 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 17/172 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I +D TT +GI ++ + D PGI K Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHK-- 65 Query: 221 HQGAGIGDRFLK---HTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 +GD ++ T R + + ++E I++ L A + I+ Sbjct: 66 -PKTALGDFMVEAAYSTLREVDTVLFMVPVDEPRGKGDDMIIERLKAAKVPV-----ILV 119 Query: 278 LSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 +++ID V D L + ++ Q VP S++ G+ + +++ L + + Sbjct: 120 VNKIDKVHPDQLLAQIDDFRQQMDFKEIVP--ISALQGNNVSHLIDILSENL 169 >gi|313904529|ref|ZP_07837905.1| ferrous iron transport protein B [Eubacterium cellulosolvens 6] gi|313470671|gb|EFR65997.1| ferrous iron transport protein B [Eubacterium cellulosolvens 6] Length = 719 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 4/100 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T +T + + ++P T+ G +K G+K+ I+ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNDLTGSNQYVGNWPGVTVEKKEGRLK-GHKDVIIQDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCI 258 + + R E+ V+L+IV + +E N+ Q + Sbjct: 64 YTMEEVVTRNYLVNEKPDVVLNIVDGTNIERNLYLTTQLV 103 >gi|113477622|ref|YP_723683.1| HSR1-related GTP-binding protein [Trichodesmium erythraeum IMS101] gi|110168670|gb|ABG53210.1| GTP-binding protein, HSR1-related [Trichodesmium erythraeum IMS101] Length = 574 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 21/144 (14%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP-----NLGIVKEGYKEFI---- 209 + + I+G NAGKST L ++T ++ AD F TL P N+ G I Sbjct: 401 VPTVAIVGYTNAGKSTLLNTLTNSEVYAADKLFATLDPITRRLNVPDTVTGKPTTIVITD 460 Query: 210 ----LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAY 265 + ++P + NA + L+ LLH+V Q+ + ++ L Sbjct: 461 TVGFIHELPPTLMNAFRAT------LEEVTDADALLHVVDLSHPAWQSQIRSVMTILQEM 514 Query: 266 NSELRKKIEIVGLSQIDTVDSDTL 289 +V ++ID VD DTL Sbjct: 515 PET--PGPALVAFNKIDEVDGDTL 536 >gi|322383675|ref|ZP_08057426.1| Era-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151887|gb|EFX44830.1| Era-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 300 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 19/169 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PN GKST + V K I +D P TT G+ + + + D PGI K Sbjct: 12 VALIGRPNVGKSTLMNQVIGQKIAIMSDKPQTTRNKIHGVYTTEHAQIVFLDTPGIHKPQ 71 Query: 221 HQGAGIGDRFLK--HTERTHV--LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + +GD +K H+ V +L +V + E + + I+++L + + + I+ Sbjct: 72 ---SKLGDYMMKVAHSTLAEVDAILFLVD-VAEGIGGGDRFIIEQLKSVQTPV-----IL 122 Query: 277 GLSQIDTVDSDTL---ARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 L++ID V + L EL VP S++ G+ + +LE + Sbjct: 123 VLNKIDKVHPEDLLPVISTYKELYPFTEIVP--VSALQGNNVTTMLEQI 169 >gi|308273753|emb|CBX30355.1| Putative GTP-binding protein ynbA [uncultured Desulfobacterium sp.] Length = 426 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 I IIG NAGKST L ++T++ F TL P+ +K E I+ D G IK+ Sbjct: 263 ISIIGYTNAGKSTLLNTLTKSSVLAEKRLFATLDPSSRRLKFPRDTEVIITDTVGFIKDL 322 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIV 244 + + R L+ +LLH++ Sbjct: 323 PKDLLVAFRATLEELNNADLLLHVI 347 >gi|308160721|gb|EFO63195.1| Nucleolar GTP-binding protein 1, putative [Giardia lamblia P15] Length = 676 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 16/86 (18%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKNAH 221 + G P+ GKS+FL ++TRA ++ + FTT +L + YK + L D PG++ + Sbjct: 173 LTGYPSVGKSSFLNALTRANVEVESWDFTT--QSLFVGHSDYKGLSYQLIDTPGLLDHPL 230 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSAL 247 + ER ++ L V+AL Sbjct: 231 E------------ERNNIELQAVAAL 244 >gi|296117721|ref|ZP_06836305.1| GTP-binding protein [Corynebacterium ammoniagenes DSM 20306] gi|295969452|gb|EFG82693.1| GTP-binding protein [Corynebacterium ammoniagenes DSM 20306] Length = 525 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 15/168 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + I I G NAGKS+ + ++T A + D F TL P + G + +L D G + Sbjct: 277 VPQIAIAGYTNAGKSSLINALTGAGVLVEDALFATLDPTTRKAELGDGRHVVLTDTVGFV 336 Query: 218 KNAHQGAGIGDRF---LKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELR 270 + H + + F L+ ++LH+V + + ++A + I D A + Sbjct: 337 R--HLPTQLVEAFKSTLEEVFNADLMLHVVDGADPFPLKQIEAVNKVIYD--IAKETGET 392 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 EI+ +++ID D LA ++ L + V + S+ TG GI ++ Sbjct: 393 PPPEIIVVNKIDAADDLALAEIRHVLDRE--NVVY-VSAATGEGISEL 437 >gi|261867584|ref|YP_003255506.1| GTP-binding protein EngA [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412916|gb|ACX82287.1| GTP-binding protein EngA [Aggregatibacter actinomycetemcomitans D11S-1] Length = 510 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 9/130 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G +FI+ D G I Sbjct: 6 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHLAGHDFIVIDTGG-IDGT 64 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E ++L +V A +A ++ Y + + K +V Sbjct: 65 EEGVEEKMAEQSLLAIEEADIVLFLVDA-----RAGLTSADIGIANYLRQRQNKTTVVVA 119 Query: 279 SQIDTVDSDT 288 +++D +D+D+ Sbjct: 120 NKVDGIDADS 129 >gi|199582328|gb|ACH89835.1| putative GDP binding protein [Alpheus cristulifrons] gi|199582330|gb|ACH89836.1| putative GDP binding protein [Alpheus cristulifrons] gi|199582332|gb|ACH89837.1| putative GDP binding protein [Alpheus cristulifrons] Length = 218 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + + H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDAIFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE--------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 DEL + E L K +E G ++ + DT+ R K+ L + V F Sbjct: 63 DELRLKDIEYITNVYDKLYKLVERGGDKKLKP-EYDTICRVKSLLEEEKRHVRF 115 >gi|291545251|emb|CBL18360.1| GTP-binding protein HflX [Ruminococcus sp. 18P13] Length = 417 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 2/103 (1%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGIIKN-A 220 I+G N GKST L +T A + F TL + I + +L D G+I+ Sbjct: 201 AIVGYTNVGKSTLLNLLTDAGVLAENKLFATLETTSRAIELPDGRSLMLVDTVGLIRRLP 260 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 H L+ V+LHI A EN + Q LD LS Sbjct: 261 HHLVEAFKSTLEEAANADVILHICDASAENCEEQAQVTLDLLS 303 >gi|284024626|ref|ZP_06379024.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 132] Length = 299 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 14/142 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG N GKSTF+ V K I +D TT G++ + I D PGI K Sbjct: 9 VSIIGRSNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK 68 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ +GD +K + T ++ +V+A EE + + I++ L + + + Sbjct: 69 HK---LGDYMMKVAKNTLSEIDAIMFMVNANEE-IGRGDEYIIEMLKNVKTPV-----FL 119 Query: 277 GLSQIDTVDSDTLARKKNELAT 298 L++ID V D L K E + Sbjct: 120 VLNKIDLVHPDELMPKIEEYQS 141 >gi|212542789|ref|XP_002151549.1| GTP binding protein, putative [Penicillium marneffei ATCC 18224] gi|210066456|gb|EEA20549.1| GTP binding protein, putative [Penicillium marneffei ATCC 18224] Length = 549 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 18/140 (12%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVT--------RAKPKIADYPFTTLYPNLGIVKEGYK 206 +LK +G+IG PN GKS+ + ++T A P A+ TT +L VK K Sbjct: 313 QLKRAISVGVIGYPNVGKSSVINALTARLNRGRSNACPTGAEAGVTT---SLREVKLDSK 369 Query: 207 EFILADIPGII-KNAHQGAGIGDRFLKHTERTHVLLHIVSALE-ENVQAAYQCILDELSA 264 L D PGI+ N+H+ + R ++ E VLL+ V + + A +L LSA Sbjct: 370 -LKLIDSPGIVFPNSHKASSKKKR--ENDEARLVLLNAVPPKQITDPIPAVNLLLKRLSA 426 Query: 265 YNSELRKKIEIVGLSQIDTV 284 N L +K ++GL I+++ Sbjct: 427 TNETLFQK--MLGLYGINSL 444 >gi|199582310|gb|ACH89826.1| putative GDP binding protein [Alpheus utriensis] Length = 218 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + + H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDAIFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE--------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 DEL + E L K +E G ++ + DT+ R K+ L + V F Sbjct: 63 DELRLKDIEYINNVWDKLYKLVERGGDKKLKP-EYDTICRVKSLLEEEKRHVRF 115 >gi|23308879|ref|NP_601147.2| GTPase [Corynebacterium glutamicum ATCC 13032] gi|21324710|dbj|BAB99333.1| GTPases [Corynebacterium glutamicum ATCC 13032] Length = 486 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 19/170 (11%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPG 215 L+ I I G NAGKS+ + ++T A + + F TL P + +G + + D G Sbjct: 257 LVPQIAIAGYTNAGKSSLINAMTGAGVLVENALFATLDPTTRKAELADG-RHVVFTDTVG 315 Query: 216 IIKNAHQGAGIGDRF---LKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSE 268 ++ H + + F L+ ++LH+V + + + A I D + + + Sbjct: 316 FVR--HLPTSLVEAFKSTLEEVVEADLMLHVVDGSDPFPLKQIDAVNTVISDIVRSTGAV 373 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 EI+ +++ID D TLA EL V F S++TG GI ++ Sbjct: 374 --PPPEIIVVNKIDQADPLTLA----ELRHAVDDVVF-VSALTGEGIKEL 416 >gi|332187780|ref|ZP_08389514.1| GTP-binding protein Era [Sphingomonas sp. S17] gi|332012130|gb|EGI54201.1| GTP-binding protein Era [Sphingomonas sp. S17] Length = 298 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + ++G PNAGKST + ++ K I + TT LG+ EG + +L D PGI Sbjct: 9 VAVVGAPNAGKSTLVNALVGQKVAIVSPKAQTTRAKLLGVAIEGEAQILLVDTPGI 64 >gi|317124374|ref|YP_004098486.1| ferrous iron transporter B [Intrasporangium calvum DSM 43043] gi|315588462|gb|ADU47759.1| ferrous iron transport protein B [Intrasporangium calvum DSM 43043] Length = 655 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 33/140 (23%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI----VKEGYKEFILADIPG- 215 ++ ++G PN+GKST ++T A+ + ++P TT+ G +E +E L D+PG Sbjct: 28 EVALVGAPNSGKSTLFNALTGARRSVGNWPGTTVEVGEGAWFLGTEETRREVALLDLPGA 87 Query: 216 -----------IIKNAHQGAGIGDR--------FLKHTERTHVLLHIVSALEE-NVQAAY 255 + + + DR H R+ LH+V+ L E +++ Sbjct: 88 YSLDPASPDEELTRRLLVDVPVADRPDVVVAVVDAAHLSRS---LHLVAQLREHSLRVVI 144 Query: 256 QCILDELSAYNSELRKKIEI 275 + +L+A R+ IEI Sbjct: 145 ALTMTDLAA-----RRAIEI 159 >gi|229087355|ref|ZP_04219495.1| Ferrous iron transport protein B [Bacillus cereus Rock3-44] gi|228695923|gb|EEL48768.1| Ferrous iron transport protein B [Bacillus cereus Rock3-44] Length = 657 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 17/166 (10%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAH 221 ++G PN GK++ ++T + + ++ T+ +G +K ++ L D+PG+ + Sbjct: 1 MLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKG--QQGTLIDLPGVYDLNPVS 58 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + G+ FL + H +L+IV A E N+ Q + E K + I GL+ Sbjct: 59 RDEGVVTNFLLTEDFQH-MLNIVDASQFERNMHLTLQLL---------EFGKPVSI-GLN 107 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDK 325 +D + N L+ G + +G G ++L LH+ Sbjct: 108 MVDVAKQRGIVIHVNRLSEILGVTAVPVVARSGKGCEELLATLHES 153 >gi|199582408|gb|ACH89875.1| putative GDP binding protein [Alpheus schmitti] gi|199582410|gb|ACH89876.1| putative GDP binding protein [Alpheus umbo] gi|199582412|gb|ACH89877.1| putative GDP binding protein [Alpheus umbo] gi|199582414|gb|ACH89878.1| putative GDP binding protein [Alpheus umbo] gi|199582416|gb|ACH89879.1| putative GDP binding protein [Alpheus umbo] Length = 218 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + + H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDAIFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE--------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 DEL + E L K +E G ++ + DT+ R K+ L + V F Sbjct: 63 DELRLKDIEYINNVYDKLYKLVERGGDKKLKP-EYDTICRVKSLLEEEKRHVRF 115 >gi|153005016|ref|YP_001379341.1| GTP-binding protein EngA [Anaeromyxobacter sp. Fw109-5] gi|152028589|gb|ABS26357.1| small GTP-binding protein [Anaeromyxobacter sp. Fw109-5] Length = 471 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 5/96 (5%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTF+ S+ + ++D P TT +V++ + F++ D GI + + Sbjct: 203 LAIVGRPNVGKSTFVNSLLGHERFVVSDVPGTTRDAIDSLVEQRGQRFVVTDTAGIRRKS 262 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQ 252 + R +K +R V+ ++ A E V+ Sbjct: 263 AIAQAVEAYSVVRSMKAIDRAEVVACLLDATEAGVE 298 >gi|127511988|ref|YP_001093185.1| GTP-binding protein Era [Shewanella loihica PV-4] gi|126637283|gb|ABO22926.1| GTP-binding protein Era [Shewanella loihica PV-4] Length = 331 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I + P TT + +GI +G ++ + D PG+ Sbjct: 40 VAIVGRPNVGKSTLLNKLLGQKISITSKKPQTTRHRIMGIHTDGPRQVVFIDTPGL 95 >gi|320546495|ref|ZP_08040810.1| GTP-binding protein HflX [Streptococcus equinus ATCC 9812] gi|320448880|gb|EFW89608.1| GTP-binding protein HflX [Streptococcus equinus ATCC 9812] Length = 412 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 2/91 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKN- 219 IG+IG NAGKST + +T K AD F TL I + + L D G I+N Sbjct: 201 IGLIGYTNAGKSTIMNVLTNDKQYEADELFATLDATTKQIYLQNQFQVTLTDTVGFIQNL 260 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + L+ + +LLH++ A + N Sbjct: 261 PTELVAAFKSTLEESRNVDLLLHVIDASDPN 291 >gi|313895890|ref|ZP_07829444.1| ribosome biogenesis GTPase Era [Selenomonas sp. oral taxon 137 str. F0430] gi|312975315|gb|EFR40776.1| ribosome biogenesis GTPase Era [Selenomonas sp. oral taxon 137 str. F0430] Length = 298 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +IG PN GKST + ++ K I +D P TT L I+ + + I D PG+ K H Sbjct: 10 AVIGRPNVGKSTLINALIGQKIAIMSDKPQTTRSRILCILTQEDAQVIFLDTPGVHKPKH 69 Query: 222 QGAGIGDRFLKHTE 235 + +G K TE Sbjct: 70 K---LGSHMAKATE 80 >gi|225388053|ref|ZP_03757777.1| hypothetical protein CLOSTASPAR_01787 [Clostridium asparagiforme DSM 15981] gi|225045906|gb|EEG56152.1| hypothetical protein CLOSTASPAR_01787 [Clostridium asparagiforme DSM 15981] Length = 427 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 70/180 (38%), Gaps = 20/180 (11%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN-A 220 I+G NAGKST L +T A D F TL P G ++ +L D G I+ Sbjct: 205 AIVGYTNAGKSTLLNHLTDADILAEDKLFATLDPTTRSFTLPGDQQILLTDTVGFIRKLP 264 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 H L+ + + ++LH+V + + + L K +EIV + Sbjct: 265 HHLIEAFKSTLEEAKYSDIILHVVDCSNPQMDMQMHVVRETL--------KDLEIVDKTV 316 Query: 281 IDTVDSDTLARKKNEL--ATQCGQVPFEF--------SSITGHGIPQILECLHDKIFSIR 330 + + R E A Q+P +F S+ TG G+ ++ L I S R Sbjct: 317 VTVFNKTDRLRAMVESGEAGPLAQLPRDFSADYQVRISAKTGEGLDELCGILEQIIRSRR 376 >gi|159111803|ref|XP_001706132.1| Nucleolar GTP-binding protein 1, putative [Giardia lamblia ATCC 50803] gi|157434225|gb|EDO78458.1| Nucleolar GTP-binding protein 1, putative [Giardia lamblia ATCC 50803] Length = 676 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 16/86 (18%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKNAH 221 + G P+ GKS+FL ++TRA ++ + FTT +L + YK + L D PG++ + Sbjct: 173 LTGYPSVGKSSFLNALTRANVEVESWDFTT--QSLFVGHSDYKGLSYQLIDTPGLLDHPL 230 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSAL 247 + ER ++ L V+AL Sbjct: 231 E------------ERNNIELQAVAAL 244 >gi|332876945|ref|ZP_08444698.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685053|gb|EGJ57897.1| ribosome biogenesis GTPase Era [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 293 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 12/145 (8%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + A V I TT + GIV + + +D PGIIK A Sbjct: 7 VNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQVVFSDTPGIIKPA 66 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + F+K + +L+++V E+ ++ + D ++ N + ++ ++ Sbjct: 67 YALQESMMAFVKDAFDDADILIYMVEIGEKGLKE--EAFFDRINKLNIPI-----LLLIN 119 Query: 280 QIDTVDSDTLARKKNELATQCGQVP 304 +IDT + L + ++A QVP Sbjct: 120 KIDTSEQQVL---EEQVAYWKEQVP 141 >gi|325290526|ref|YP_004266707.1| GTP-binding protein Era-like-protein [Syntrophobotulus glycolicus DSM 8271] gi|324965927|gb|ADY56706.1| GTP-binding protein Era-like-protein [Syntrophobotulus glycolicus DSM 8271] Length = 305 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PNAGKST L ++ K I++ P TT I+ E + + D PGI K Sbjct: 16 VAVVGRPNAGKSTLLNTLVGQKVLIISEKPQTTRNRIQCILTEERGQIVFIDTPGIHKPK 75 Query: 221 HQ 222 HQ Sbjct: 76 HQ 77 >gi|262304261|gb|ACY44723.1| GTP-binding protein [Loxothylacus texanus] Length = 279 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 5/88 (5%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAY 265 + DI G++K A G G+G+ FL H + + H+ A + +V+ + D L+ Sbjct: 35 VTDIAGLVKGASNGEGLGNAFLSHIKACDAIFHMCRAFADEDVTHVEGEVDPVRD-LNII 93 Query: 266 NSELRKKIEIVGLSQIDTVDSDTLARKK 293 N ELR K E L ++ + TL K Sbjct: 94 NEELRLKDESYLLPFMEKFEKTTLRSDK 121 >gi|261253899|ref|ZP_05946472.1| GTP-binding protein Era [Vibrio orientalis CIP 102891] gi|260937290|gb|EEX93279.1| GTP-binding protein Era [Vibrio orientalis CIP 102891] Length = 325 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +G+ EG + I D PG+ Sbjct: 34 VAIVGRPNVGKSTLLNRILGQKISITSRKPQTTRHRIMGVDTEGDYQAIYVDTPGL 89 >gi|170761539|ref|YP_001788258.1| GTP-binding protein Era [Clostridium botulinum A3 str. Loch Maree] gi|226741201|sp|B1KZM3|ERA_CLOBM RecName: Full=GTPase Era gi|169408528|gb|ACA56939.1| GTP-binding protein Era [Clostridium botulinum A3 str. Loch Maree] Length = 296 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L ++ + K I P TT I+ E + + D PGI K Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGIHKPK 66 Query: 221 HQ 222 H+ Sbjct: 67 HK 68 >gi|218961441|ref|YP_001741216.1| GTP-binding protein Era [Candidatus Cloacamonas acidaminovorans] gi|167730098|emb|CAO81010.1| GTP-binding protein Era [Candidatus Cloacamonas acidaminovorans] Length = 299 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 31/174 (17%) Query: 162 IGIIGLPNAGKSTFL-------ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIP 214 + IIG PN GKST + S+T KP+ TT Y GI + I D P Sbjct: 17 VTIIGKPNTGKSTLMNLILGEKISITSPKPQ------TTRYAIKGIWNTSEHQIIFVDTP 70 Query: 215 GIIKNAHQGAGIGDRFLK--HTERTHVLLHIVSALEENVQAAY-QCILDELSAYNSELRK 271 G +K ++ + ++ LK H V L I + Y + +L++L K Sbjct: 71 GYLKPRYE---LQEKMLKIWHNALKDVDLIIFLTQIDGFPTEYDKEVLNQLKTL-----K 122 Query: 272 KIEIVGLSQIDT---VDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 ++ +++D VD + L + L +V F S+ TG IP+++E + Sbjct: 123 NPQLAVFNKLDLNPEVDRNELVKY---LPESINEV-FFVSAKTGENIPELMEAI 172 >gi|149916653|ref|ZP_01905155.1| GTP-binding protein [Plesiocystis pacifica SIR-1] gi|149822370|gb|EDM81759.1| GTP-binding protein [Plesiocystis pacifica SIR-1] Length = 465 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 15/102 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G NAGK++ + ++T+A+ D PF TL + + I++D G I+ Sbjct: 241 VALVGYTNAGKTSLMNALTQAELSARDMPFETLDTTTRSLTRHGGDVIISDTVGFIRRLP 300 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 Q R L E T L E +A+ C++ +LS Sbjct: 301 Q------RLLASFETT---------LAEIREASVVCVVVDLS 327 >gi|55820687|ref|YP_139129.1| ferrous iron uptake transporter protein B [Streptococcus thermophilus LMG 18311] gi|116627493|ref|YP_820112.1| Fe2+ transport system protein B [Streptococcus thermophilus LMD-9] gi|55736672|gb|AAV60314.1| ferrous iron uptake transporter protein B [Streptococcus thermophilus LMG 18311] gi|116100770|gb|ABJ65916.1| Fe2+ transport system protein B [Streptococcus thermophilus LMD-9] gi|312278011|gb|ADQ62668.1| Fe2+ transport system protein B [Streptococcus thermophilus ND03] Length = 712 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 76/166 (45%), Gaps = 16/166 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + +I +IG PN+GK++ +T ++ ++P T+ G+VK+ K+ + D+PGI Sbjct: 1 MTEIALIGNPNSGKTSLFNLITGHNQRVGNWPGVTVERKSGLVKKN-KDLEIQDLPGIYS 59 Query: 219 NAHQGA--GIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + + +L ++R +L++V A LE N+ Q I + Sbjct: 60 MSPYSPEEKVARDYL-LSQRADSILNVVDATNLERNLYLTTQLIETGIPV---------- 108 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + L+ ID +D ++L+ G S++ G+ Q+++ Sbjct: 109 TIALNMIDVLDGQGKKINVDKLSYHLGVPVVATSALKQTGVDQVVK 154 >gi|332288185|ref|YP_004419037.1| GTP-binding protein EngA [Gallibacterium anatis UMN179] gi|330431081|gb|AEC16140.1| GTP-binding protein EngA [Gallibacterium anatis UMN179] Length = 507 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 10/130 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST +TR++ +A++P T G + EFI+ D G I + Sbjct: 5 IALVGRPNVGKSTLFNRLTRSRDALVANFPGLTRDRKYGQGQLNGTEFIVIDTGG-IDGS 63 Query: 221 HQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 QG + ++ L + ++L +V A + AA I L R+K +V Sbjct: 64 EQGIEEKMAEQSLLAIDEADIVLFLVDA-RAGLTAADIGIAQYLRR-----REKTTVVVA 117 Query: 279 SQIDTVDSDT 288 ++ID +D+D+ Sbjct: 118 NKIDGIDADS 127 >gi|312601056|gb|ADQ90311.1| GTP-binding protein [Mycoplasma hyopneumoniae 168] Length = 263 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 12/58 (20%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE----GYKEFILADIPGII 217 +IG+PN GKST + +T+++ K+ + P GI + Y +F+ D PGI+ Sbjct: 115 VIGVPNTGKSTLINLITKSQLKVGNQP--------GITRNNQWISYNKFLFLDTPGIL 164 >gi|262304283|gb|ACY44734.1| GTP-binding protein [Polyxenus fasciculatus] Length = 280 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 5/67 (7%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + L H+ A E+ +V+ + D + Sbjct: 35 VVDIAGLVKGAAEGQGLGNAFLSHIKACDALFHLCRAFEDEDVTHVEGEINPVRD-IGII 93 Query: 266 NSELRKK 272 N ELR K Sbjct: 94 NEELRLK 100 >gi|262304201|gb|ACY44693.1| GTP-binding protein [Ammothea hilgendorfi] Length = 279 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 24/41 (58%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K A +G G+G+ FL H L H+ A E++ Sbjct: 35 VVDIAGLVKGASEGQGLGNAFLSHISACDALFHLTRAFEDD 75 >gi|256026685|ref|ZP_05440519.1| GTP-binding protein Era [Fusobacterium sp. D11] gi|289764681|ref|ZP_06524059.1| GTP binding protein [Fusobacterium sp. D11] gi|289716236|gb|EFD80248.1| GTP binding protein [Fusobacterium sp. D11] Length = 298 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 10/166 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST + + K I T N+ GI+ ++I D PGI K Sbjct: 6 IAVVGRPNVGKSTLINKLVSEKVAIVSDKAGTTRDNIKGILNFKDNQYIFIDTPGIHKPQ 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H G + + + + ++L ++ A + + ++D + N +KK +I+ ++ Sbjct: 66 HLLGEYMTNIAVNILKDVDIILFLIDA-SKPIGTGDMFVMDRI---NENAKKKPKILLVN 121 Query: 280 QIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECL 322 ++D + + K E+ + G ++ F S + GI Q+LE L Sbjct: 122 KVDLISDEQKEEKLKEIEEKLGNFDKIIFA-SGMYSFGISQLLEAL 166 >gi|305679952|ref|ZP_07402762.1| ferrous iron transport protein B [Corynebacterium matruchotii ATCC 14266] gi|305660572|gb|EFM50069.1| ferrous iron transport protein B [Corynebacterium matruchotii ATCC 14266] Length = 636 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPG 215 + ++G PNAGKST S+T AK ++ ++P TT+ + G K+ + + D PG Sbjct: 9 VALVGAPNAGKSTLFNSLTGAKARMGNWPGTTVEVSRGAWKQSKDVTYDVIDFPG 63 >gi|238751151|ref|ZP_04612646.1| Ferrous iron transport protein B [Yersinia rohdei ATCC 43380] gi|238710629|gb|EEQ02852.1| Ferrous iron transport protein B [Yersinia rohdei ATCC 43380] Length = 771 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 17/164 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 IG+IG PNAGK+T +T A+ ++ ++ T+ G + L D+PG + Sbjct: 6 IGLIGNPNAGKTTLFNQLTGARQRVGNWAGVTVERKEGHFSTAQHQVTLVDLPGTYSLTT 65 Query: 220 AHQGAGIGDRFLKH---TERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + + ++ H + +L+++V A LE N+ Q I EL Sbjct: 66 ISEQTSLDEQIACHYILSGEADLLINVVDAANLERNLYLTLQLI---------ELGIPC- 115 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 I+ L+ +D S + L+ Q G S G GI ++ Sbjct: 116 ILALNMLDIAKSQHIDIDIAALSQQLGCPVIPLISTRGRGINEL 159 >gi|195431140|ref|XP_002063606.1| GK21326 [Drosophila willistoni] gi|194159691|gb|EDW74592.1| GK21326 [Drosophila willistoni] Length = 382 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 18/150 (12%) Query: 162 IGIIGLPNAGKSTFLASVT--RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 I +IG+PN GKSTF+ ++ R P A TT + I G + + D PG++ Sbjct: 64 IAVIGVPNVGKSTFINNIINHRVCPTSAKV-HTTRKSHSAICTTGQTQLVFHDTPGLVTQ 122 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQ------CILDELSAYNS----EL 269 ++ K + R + V A+ + ++ +LD L AY + + Sbjct: 123 REIRKHNLEQSFKSSYRHAIQNADVIAVMHDASNSWTRKELHPTVLDTLKAYANLPSFLI 182 Query: 270 RKKIEI-----VGLSQIDTVDSDTLARKKN 294 KI++ V L I T+ +DTL K++ Sbjct: 183 LNKIDVLKSKRVLLDLIKTLTNDTLTGKRS 212 >gi|323491197|ref|ZP_08096383.1| GTPase Era [Vibrio brasiliensis LMG 20546] gi|323314565|gb|EGA67643.1| GTPase Era [Vibrio brasiliensis LMG 20546] Length = 325 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +G+ EG + I D PG+ Sbjct: 34 VAIVGRPNVGKSTLLNRILGQKISITSRKPQTTRHRIMGVDTEGDYQAIYVDTPGL 89 >gi|288905014|ref|YP_003430236.1| GTP binding protein [Streptococcus gallolyticus UCN34] gi|306831087|ref|ZP_07464248.1| GTP-binding protein HflX [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|306833193|ref|ZP_07466322.1| GTP-binding protein HflX [Streptococcus bovis ATCC 700338] gi|288731740|emb|CBI13301.1| putative conserved GTP binding protein [Streptococcus gallolyticus UCN34] gi|304424560|gb|EFM27697.1| GTP-binding protein HflX [Streptococcus bovis ATCC 700338] gi|304426653|gb|EFM29764.1| GTP-binding protein HflX [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 412 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 2/103 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKN- 219 IG+IG NAGKST + +T K AD F TL I + + L D G I+N Sbjct: 201 IGLIGYTNAGKSTIMNVLTNDKQYEADELFATLDATTKQIYLQNQFQVTLTDTVGFIQNL 260 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 + L+ + +LLH++ A + N + +L+ L Sbjct: 261 PTELVAAFKSTLEESRNVDLLLHVIDASDPNHAEHEKVVLNLL 303 >gi|239931377|ref|ZP_04688330.1| GTP-binding protein Era [Streptomyces ghanaensis ATCC 14672] gi|291439747|ref|ZP_06579137.1| GTP-binding protein Era [Streptomyces ghanaensis ATCC 14672] gi|291342642|gb|EFE69598.1| GTP-binding protein Era [Streptomyces ghanaensis ATCC 14672] Length = 320 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 11/132 (8%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I ++ P TT + GIV + IL D PG+ K Sbjct: 27 VGRPNAGKSTLTNALVGQKVAITSNRPQTTRHTVRGIVHRPDAQLILVDTPGLHKPR--- 83 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ ++ + + I EL+ +RK ++ +++ Sbjct: 84 TLLGERLNDVVRTTWAEVDVIGFCLPADQKIGPGDRFIAKELAG----IRKTPKVAIVTK 139 Query: 281 IDTVDSDTLARK 292 D VDS LA + Sbjct: 140 TDLVDSKALAEQ 151 >gi|256821981|ref|YP_003145944.1| GTP-binding protein Era [Kangiella koreensis DSM 16069] gi|256795520|gb|ACV26176.1| GTP-binding protein Era [Kangiella koreensis DSM 16069] Length = 299 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 ++G PN GKST + + K I P TT + LGI + + + D PGI KN Sbjct: 11 AVLGRPNVGKSTLMNHILGQKVSITSRKPQTTRHRILGIYTDDDAQILFVDTPGIHKN 68 >gi|170762293|ref|YP_001752575.1| GTP-binding protein Era [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|186701592|ref|ZP_02553723.2| GTP-binding protein Era [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|13959363|sp|Q9PPZ9|ERA_UREPA RecName: Full=GTPase Era gi|189037684|sp|B1AJD1|ERA_UREP2 RecName: Full=GTPase Era gi|168827870|gb|ACA33132.1| GTP-binding protein Era [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|186700821|gb|EDU19103.1| GTP-binding protein Era [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 300 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + ++ + K I++ P TT I ++ I D PG Sbjct: 8 VAIVGKPNVGKSTLINAIMKKKVSIISNKPQTTRNAVKEIYEDDESAIIFTDTPGF---- 63 Query: 221 HQGAGIGDRFLKH 233 H+ + D FL H Sbjct: 64 HEPSNKLDLFLNH 76 >gi|13358054|ref|NP_078328.1| GTP-binding protein [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|6899489|gb|AAF30903.1|AE002147_4 GTP-binding protein [Ureaplasma parvum serovar 3 str. ATCC 700970] Length = 304 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + ++ + K I++ P TT I ++ I D PG Sbjct: 12 VAIVGKPNVGKSTLINAIMKKKVSIISNKPQTTRNAVKEIYEDDESAIIFTDTPGF---- 67 Query: 221 HQGAGIGDRFLKH 233 H+ + D FL H Sbjct: 68 HEPSNKLDLFLNH 80 >gi|317491019|ref|ZP_07949455.1| GTP-binding protein Era [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920566|gb|EFV41889.1| GTP-binding protein Era [Enterobacteriaceae bacterium 9_2_54FAA] Length = 301 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 IAIVGRPNVGKSTLLNQLLGQKISITSRKPQTTRHRIMGIHTEGPYQAIYVDTPGL 66 >gi|297538136|ref|YP_003673905.1| GTP-binding proten HflX [Methylotenera sp. 301] gi|297257483|gb|ADI29328.1| GTP-binding proten HflX [Methylotenera sp. 301] Length = 375 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 18/135 (13%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL---YPNLGIVKEGYKEFILADIPG 215 + + ++G NAGKST +T+A +AD F TL + I G +L+D G Sbjct: 198 VMTVSLVGYTNAGKSTVFNRLTKADIYVADQLFATLDTTTHKIYIADAG--SVVLSDTVG 255 Query: 216 IIKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSEL 269 IK H + + F L+ + +LLHIV N A +L E+ A N Sbjct: 256 FIK--HLPHALVEAFGATLEEAAQADLLLHIVDTASTNRDEQIAQVNKVLLEIGAANVP- 312 Query: 270 RKKIEIVGLSQIDTV 284 +I+ +QID V Sbjct: 313 ----QILVHNQIDRV 323 >gi|291287186|ref|YP_003504002.1| ferrous iron transport protein B [Denitrovibrio acetiphilus DSM 12809] gi|290884346|gb|ADD68046.1| ferrous iron transport protein B [Denitrovibrio acetiphilus DSM 12809] Length = 729 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 20/142 (14%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 +I I G PN GK++ ++T A +A+YP T+ VK F + D+PG + Sbjct: 3 NIAIAGNPNCGKTSLFNNITGANYHVANYPGVTVEKKEASVKHNGSVFNIVDLPGTYSLS 62 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + + R E+ V++ ++ A LE N+ Q + EL + ++ Sbjct: 63 PYSLEEVVARDYVVNEKPEVVVDVLDASNLERNLYMFVQFM---------ELEVPV-VLA 112 Query: 278 LSQIDT-------VDSDTLARK 292 L+ +D +D D LA+K Sbjct: 113 LNMVDVAKKRNIHIDVDLLAKK 134 >gi|268610135|ref|ZP_06143862.1| ferrous iron transport protein B [Ruminococcus flavefaciens FD-1] Length = 679 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 39/177 (22%), Positives = 75/177 (42%), Gaps = 13/177 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK--- 218 I + G PN GKST ++T K ++ T+ G + G EF LADIPGI Sbjct: 7 IVLAGNPNVGKSTVFNALTGMKQHTGNWSGKTVSGAYGTFQHGGAEFTLADIPGIYSLRA 66 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 N+ + D V++ + LE N+ Q + E +++ +V + Sbjct: 67 NSAEEREAADMISFSGADAVVVVCDATCLERNLSLVLQTM---------ECAERV-MVCV 116 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGENEF 335 + +D + + +L+ G S+ +G G+ ++ E ++ + + E++ Sbjct: 117 NLMDEAEKKGIKVDIAKLSDNLGVPVTAASARSGQGLDELKEAIYSLVTDVPAEHKL 173 >gi|187778474|ref|ZP_02994947.1| hypothetical protein CLOSPO_02068 [Clostridium sporogenes ATCC 15579] gi|226950371|ref|YP_002805462.1| GTP-binding protein Era [Clostridium botulinum A2 str. Kyoto] gi|254783292|sp|C1FVS6|ERA_CLOBJ RecName: Full=GTPase Era gi|187772099|gb|EDU35901.1| hypothetical protein CLOSPO_02068 [Clostridium sporogenes ATCC 15579] gi|226842790|gb|ACO85456.1| GTP-binding protein Era [Clostridium botulinum A2 str. Kyoto] Length = 296 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L ++ + K I P TT I+ E + + D PGI K Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGIHKPK 66 Query: 221 HQ 222 H+ Sbjct: 67 HK 68 >gi|165975864|ref|YP_001651457.1| GTP-binding protein EngA [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|238687527|sp|B0BTQ8|DER_ACTPJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|165875965|gb|ABY69013.1| conserved putative GTP-binding protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 506 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 17/174 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +TR + +AD+P T G FI+ D G I Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHANIAGYNFIVIDTGG-IDGT 63 Query: 221 HQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 +G + ++ L E V+L +V A V A D A R+K +V Sbjct: 64 EEGVEEKMAEQSLLAIEEADVVLFLVDARAGLVPA------DIGIAQYLRQREKTTVVVA 117 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 ++ D +D+D+ + +L G+V + ++ G G+ Q++ D++ + GE Sbjct: 118 NKTDGIDADSHCAEFYQLG--LGEVE-QIAAAQGRGVTQLI----DQVLAPLGE 164 >gi|157814206|gb|ABV81848.1| putative GTP-binding protein [Narceus americanus] Length = 280 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 31/135 (22%) Query: 190 PFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 P + + P L +V DI G++K A +G G+G+ FL H + + H+ A E+ Sbjct: 25 PLSKVPPFLNVV----------DIAGLVKGASEGQGLGNAFLSHIKACDGIFHLCRAFED 74 Query: 250 N----VQAAYQCILDELSAYNSELR-KKIEIVGLSQIDTVDS--------------DTLA 290 + V+ I D + N ELR K +E + S +D ++ D L Sbjct: 75 DDVTHVEGDINPIRD-IEIINEELRLKDVEYIR-SAMDKMERTVLRGGDKKMKPEYDVLV 132 Query: 291 RKKNELATQCGQVPF 305 + L+ +C + F Sbjct: 133 KINQLLSDECKHIRF 147 >gi|148380897|ref|YP_001255438.1| GTP-binding protein Era [Clostridium botulinum A str. ATCC 3502] gi|153932263|ref|YP_001385205.1| GTP-binding protein Era [Clostridium botulinum A str. ATCC 19397] gi|153936986|ref|YP_001388674.1| GTP-binding protein Era [Clostridium botulinum A str. Hall] gi|226741172|sp|A7FXK1|ERA_CLOB1 RecName: Full=GTPase Era gi|226741199|sp|A5I626|ERA_CLOBH RecName: Full=GTPase Era gi|148290381|emb|CAL84508.1| GTP-binding protein [Clostridium botulinum A str. ATCC 3502] gi|152928307|gb|ABS33807.1| GTP-binding protein Era [Clostridium botulinum A str. ATCC 19397] gi|152932900|gb|ABS38399.1| GTP-binding protein Era [Clostridium botulinum A str. Hall] Length = 296 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L ++ + K I P TT I+ E + + D PGI K Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGIHKPK 66 Query: 221 HQ 222 H+ Sbjct: 67 HK 68 >gi|71908592|ref|YP_286179.1| GTP-binding protein, HSR1-related [Dechloromonas aromatica RCB] gi|71848213|gb|AAZ47709.1| GTP-binding protein HflX [Dechloromonas aromatica RCB] Length = 384 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 2/90 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL-YPNLGIVKEGYKEFILADIPGII 217 + + ++G NAGKST ++T A AD F TL + + EG +++D G I Sbjct: 197 VLSVSLVGYTNAGKSTLFNALTHAGVYAADKLFATLDTTSRKLWIEGAGNIVISDTVGFI 256 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSA 246 +N H L+ +LLH+V + Sbjct: 257 RNLPHSLVDAFHATLEAATDADILLHVVDS 286 >gi|50122199|ref|YP_051366.1| GTP-binding protein Era [Pectobacterium atrosepticum SCRI1043] gi|49612725|emb|CAG76175.1| GTP-binding protein [Pectobacterium atrosepticum SCRI1043] Length = 301 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 VAIVGRPNVGKSTLLNQLLGQKISITSRKPQTTRHRIMGIHTEGPYQAIYVDTPGL 66 >gi|332982413|ref|YP_004463854.1| ribosome-associated GTPase EngA [Mahella australiensis 50-1 BON] gi|332700091|gb|AEE97032.1| ribosome-associated GTPase EngA [Mahella australiensis 50-1 BON] Length = 437 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 84/172 (48%), Gaps = 17/172 (9%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I +IG PNAGKS+ + + + + ++D P TT +++ +IL D G+ + A Sbjct: 178 IAVIGKPNAGKSSIVNRLLGQERVIVSDQPGTTRDAIDVLIEHEGDRYILIDTAGLRRKA 237 Query: 221 HQGAGIG----DRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + R L+ +R+ V ++ A+E + + ++ + E K + IV Sbjct: 238 KINEAVERYSVSRALEAVQRSDVAALVIDAVEGVTEQDAK-----IAGFAHEKGKGL-IV 291 Query: 277 GLSQIDTVDSD--TLARKKNELATQCGQV---PFEF-SSITGHGIPQILECL 322 L++ D ++ D T++R K ++A + G + P F S+ TG + +IL + Sbjct: 292 LLNKWDLIEKDNKTVSRYKQDIAEKLGFIGYAPVLFISAKTGQRMDKILPMV 343 >gi|297171214|gb|ADI22222.1| GTPase [uncultured Gemmatimonadales bacterium HF0200_34B24] gi|297171330|gb|ADI22335.1| GTPase [uncultured actinobacterium HF0500_01C15] Length = 309 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 11/165 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII--K 218 + ++G PNAGKST L I T + + GI +G + I D PG++ + Sbjct: 16 VALVGRPNAGKSTLLNRFVGEHLSIVTSKAQTTWQRVTGIRTKGTDQLIFLDTPGLLETR 75 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + Q A +G E LL + + + Q D + A SE+ + + IV L Sbjct: 76 DLLQHAMLGAALEALAEADVALLVV-----DTTRRPTQTDTDRILAAFSEIHRPLHIV-L 129 Query: 279 SQIDTVDSDTL-ARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 +++D + ++ A K GQV S+ TG G+ +L + Sbjct: 130 NKLDQANLSSIEAWKSWSEEGLSGQV-HSVSAKTGKGVDSLLNVI 173 >gi|218883384|ref|YP_002427766.1| Ferrous iron transport protein B [Desulfurococcus kamchatkensis 1221n] gi|218765000|gb|ACL10399.1| Ferrous iron transport protein B [Desulfurococcus kamchatkensis 1221n] Length = 698 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 31/52 (59%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 IG PN GKS+ VT++ ++ ++P T+ + G + G + IL D+PGI Sbjct: 14 IGQPNVGKSSLFNLVTKSHVEVGNWPGKTVVVHKGEITYGSYQLILYDLPGI 65 >gi|254382934|ref|ZP_04998290.1| GTP-binding protein Era [Streptomyces sp. Mg1] gi|194341835|gb|EDX22801.1| GTP-binding protein Era [Streptomyces sp. Mg1] Length = 323 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 11/151 (7%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I ++ P TT + GIV + +L D PG+ K Sbjct: 30 VGRPNAGKSTLTNALVGTKVAITSNRPQTTRHTVRGIVHRPDAQLVLVDTPGLHKPR--- 86 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ ++ + + I EL+ ++K +I +++ Sbjct: 87 TLLGERLNDVVRTTWAEVDVIGFCLPADQKLGPGDKFIAKELAG----IKKTPKIAIITK 142 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEFSSIT 311 D V+S LA + + ++ FE++ I Sbjct: 143 TDLVESKQLAEQLLAVHQLAAELGFEWAEIV 173 >gi|183508428|ref|ZP_02957974.1| GTP-binding protein Era [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|182675835|gb|EDT87740.1| GTP-binding protein Era [Ureaplasma parvum serovar 14 str. ATCC 33697] Length = 300 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + ++ + K I++ P TT I ++ I D PG Sbjct: 8 VAIVGKPNVGKSTLINAIMKKKVSIISNKPQTTRNAVKEIYEDDESAIIFTDTPGF---- 63 Query: 221 HQGAGIGDRFLKH 233 H+ + D FL H Sbjct: 64 HEPSNKLDLFLNH 76 >gi|171920300|ref|ZP_02931650.1| GTP-binding protein Era [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171902714|gb|EDT49003.1| GTP-binding protein Era [Ureaplasma parvum serovar 1 str. ATCC 27813] Length = 300 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + ++ + K I++ P TT I ++ I D PG Sbjct: 8 VAIVGKPNVGKSTLINAIMKKKVSIISNKPQTTRNAVKEIYEDDESAIIFTDTPGF---- 63 Query: 221 HQGAGIGDRFLKH 233 H+ + D FL H Sbjct: 64 HEPSNKLDLFLNH 76 >gi|158819591|gb|ABW80904.1| ferrous iron transport protein B [uncultured bacterium] Length = 763 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 25/104 (24%), Positives = 55/104 (52%), Gaps = 7/104 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I ++G PN GK+T ++T A+ ++ ++P T+ G ++ + + D+PGI + Sbjct: 6 IALVGNPNCGKTTLFNALTGARQRVGNWPGVTVERKEGTYRDQGQTVTVVDLPGIYSLDV 65 Query: 220 AHQGAGIGDRFLKH---TERTHVLLHIVSA--LEENVQAAYQCI 258 A G G+ ++ + + +++++I+ A LE N+ Q + Sbjct: 66 AAGGTGLDEQVARDYLLSGEANLVVNILDASNLERNLYLTTQLL 109 >gi|15892953|ref|NP_360667.1| GTP-binding protein EngA [Rickettsia conorii str. Malish 7] gi|24636839|sp|Q92GU2|DER_RICCN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|15620147|gb|AAL03568.1| conserved GTP-binding protein [Rickettsia conorii str. Malish 7] Length = 447 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 4/76 (5%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST ++ R K + D P T K G EF+L D PG+ +N Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPGVTRDRKYTDGKIGSFEFLLIDTPGLDENP 65 Query: 221 HQGAGIGDRFLKHTER 236 + +G+R ++ T + Sbjct: 66 N---SMGERLIEQTTK 78 >gi|323499982|ref|ZP_08104938.1| GTPase Era [Vibrio sinaloensis DSM 21326] gi|323314948|gb|EGA68003.1| GTPase Era [Vibrio sinaloensis DSM 21326] Length = 325 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +G+ EG + I D PG+ Sbjct: 34 VAIVGRPNVGKSTLLNRILGQKISITSRKPQTTRHRIMGVDTEGDYQAIYVDTPGL 89 >gi|300724175|ref|YP_003713492.1| GTP-binding protein [Xenorhabdus nematophila ATCC 19061] gi|297630709|emb|CBJ91374.1| GTP-binding protein, essential for cell growth [Xenorhabdus nematophila ATCC 19061] Length = 496 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + +EFI+ D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGQEFIIIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + + L E ++L +V A + A I L + R+K Sbjct: 60 IDGTEEGVETHMAAQSLMAIEEADIVLFMVDA-RSGLMPADHAIAKHLRS-----REKAT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + ++ D +D +T + L G + + ++ G G+ Q++E Sbjct: 114 FLVANKTDGIDIETSVAEFYSLG--LGDI-YSIAASHGRGVTQLIE 156 >gi|256959668|ref|ZP_05563839.1| Fe2+ transport system protein B [Enterococcus faecalis Merz96] gi|293384860|ref|ZP_06630703.1| ferrous iron transport protein B [Enterococcus faecalis R712] gi|293389150|ref|ZP_06633617.1| ferrous iron transport protein B [Enterococcus faecalis S613] gi|312908158|ref|ZP_07767136.1| ferrous iron transport protein B [Enterococcus faecalis DAPTO 512] gi|312979094|ref|ZP_07790809.1| ferrous iron transport protein B [Enterococcus faecalis DAPTO 516] gi|256950164|gb|EEU66796.1| Fe2+ transport system protein B [Enterococcus faecalis Merz96] gi|291077864|gb|EFE15228.1| ferrous iron transport protein B [Enterococcus faecalis R712] gi|291081521|gb|EFE18484.1| ferrous iron transport protein B [Enterococcus faecalis S613] gi|295114159|emb|CBL32796.1| ferrous iron transporter FeoB [Enterococcus sp. 7L76] gi|310625866|gb|EFQ09149.1| ferrous iron transport protein B [Enterococcus faecalis DAPTO 512] gi|311288128|gb|EFQ66684.1| ferrous iron transport protein B [Enterococcus faecalis DAPTO 516] Length = 716 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 14/163 (8%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 I + G PN+GK+T +T A + ++P T+ G+ K+ K I+ D+PGI + Sbjct: 4 QIALAGNPNSGKTTTFNMLTGANQYVGNWPGVTVERKEGVAKKD-KTLIIQDLPGIYSLS 62 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + I R ++ V+L+I V+ LE N+ Q I L + Sbjct: 63 PYTPEEIVARDYLLEDQPSVILNILDVTNLERNLYLTTQLIETGLPV----------VCA 112 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 L+ +D ++ + +L+ G E S++ G+ L+ Sbjct: 113 LNMMDLLEKNGQTLNSEKLSYGLGVPVVEISALKNRGLDHALK 155 >gi|325977982|ref|YP_004287698.1| putative GTP-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177910|emb|CBZ47954.1| putative GTP-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 412 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 2/103 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKN- 219 IG+IG NAGKST + +T K AD F TL I + + L D G I+N Sbjct: 201 IGLIGYTNAGKSTIMNVLTNDKQYEADELFATLDATTKQIYLQNQFQVTLTDTVGFIQNL 260 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 + L+ + +LLH++ A + N + +L+ L Sbjct: 261 PTELVAAFKSTLEESRNVDLLLHVIDASDPNHAEHEKVVLNLL 303 >gi|307288836|ref|ZP_07568814.1| ferrous iron transport protein B [Enterococcus faecalis TX0109] gi|306500305|gb|EFM69644.1| ferrous iron transport protein B [Enterococcus faecalis TX0109] gi|315149365|gb|EFT93381.1| ferrous iron transport protein B [Enterococcus faecalis TX0012] gi|315166217|gb|EFU10234.1| ferrous iron transport protein B [Enterococcus faecalis TX1302] Length = 716 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 14/163 (8%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 I + G PN+GK+T +T A + ++P T+ G+ K+ K I+ D+PGI + Sbjct: 4 QIALAGNPNSGKTTTFNMLTGANQYVGNWPGVTVERKEGVAKKD-KTLIIQDLPGIYSLS 62 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + I R ++ V+L+I V+ LE N+ Q I L + Sbjct: 63 PYTPEEIVARDYLLEDQPSVILNILDVTNLERNLYLTTQLIETGLPV----------VCA 112 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 L+ +D ++ + +L+ G E S++ G+ L+ Sbjct: 113 LNMMDLLEKNGQTLNSEKLSYGLGVPVVEISALKNRGLDHALK 155 >gi|291085040|ref|ZP_06570912.1| ribosome-associated GTPase EngA [Citrobacter youngae ATCC 29220] gi|291071734|gb|EFE09843.1| ribosome-associated GTPase EngA [Citrobacter youngae ATCC 29220] Length = 504 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 13 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 72 Query: 215 GIIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 73 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRARQK 125 Query: 273 IEIVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 126 PTFLVANKTDGLDPD 140 >gi|255263172|ref|ZP_05342514.1| GTP-binding protein HflX [Thalassiobium sp. R2A62] gi|255105507|gb|EET48181.1| GTP-binding protein HflX [Thalassiobium sp. R2A62] Length = 452 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 33/179 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNA 220 + ++G NAGKST +T A+ D F TL P + V E IL+D G I + Sbjct: 210 VALVGYTNAGKSTLFNRLTGAEVFAKDMLFATLDPTMRKVDLPTGDEIILSDTVGFISDL 269 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS--ELRKKIEIVG- 277 T ++ + LEE + A + ++S+ ++ + R +EI+ Sbjct: 270 P---------------TELVASFRATLEEVLDADLILHVRDISSADTHEQSRDVMEILTK 314 Query: 278 ------------LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 ++ID V+ D RK A+ F SS+TG G+ +L + D Sbjct: 315 LGVGQDAPLLEVWNKIDQVELD--VRKGLNTASDRDDAIFVTSSVTGEGMDPLLAAISD 371 >gi|227519138|ref|ZP_03949187.1| ferrous iron transport protein B [Enterococcus faecalis TX0104] gi|227073415|gb|EEI11378.1| ferrous iron transport protein B [Enterococcus faecalis TX0104] Length = 716 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 14/163 (8%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 I + G PN+GK+T +T A + ++P T+ G+ K+ K I+ D+PGI + Sbjct: 4 QIALAGNPNSGKTTTFNMLTGANQYVGNWPGVTVERKEGVAKKD-KTLIIQDLPGIYSLS 62 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + I R ++ V+L+I V+ LE N+ Q I L + Sbjct: 63 PYTPEEIVARDYLLEDQPSVILNILDVTNLERNLYLTTQLIETGLPV----------VCA 112 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 L+ +D ++ + +L+ G E S++ G+ L+ Sbjct: 113 LNMMDLLEKNGQTLNSEKLSYGLGVPVVEISALKNRGLDHALK 155 >gi|210134718|ref|YP_002301157.1| GTP-binding protein Era [Helicobacter pylori P12] gi|226741217|sp|B6JL99|ERA_HELP2 RecName: Full=GTPase Era gi|210132686|gb|ACJ07677.1| GTP-binding protein Era-like protein [Helicobacter pylori P12] Length = 301 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 25/173 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYK-EFILADIPG 215 + +IG PNAGKST L ++ A + + + + KEGY+ + I D PG Sbjct: 8 VALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPG 67 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS--ELRKKI 273 + HQ + L L + E V A + D+L Y L +K Sbjct: 68 L---HHQEKLLNQCMLSQA------LKAMGDAELCVFLA--SVHDDLKGYEEFLSLCQKP 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECL 322 I+ LS+IDT + +K E Q VP S+ + +LEC+ Sbjct: 117 HILALSKIDTATHKQVLQKLQEYQQYDSQFLALVP--LSAKKSQNLNALLECI 167 >gi|199582322|gb|ACH89832.1| putative GDP binding protein [Alpheus cristulifrons] gi|199582326|gb|ACH89834.1| putative GDP binding protein [Alpheus cristulifrons] Length = 218 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + + H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDAIFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE--------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 DEL + E L K +E G ++ + DT+ R K+ L + V F Sbjct: 63 DELRLKDIEYITNVYDKLYKLVERGGDKKLKP-EYDTICRVKSLLEEEKRHVRF 115 >gi|168181631|ref|ZP_02616295.1| GTP-binding protein Era [Clostridium botulinum Bf] gi|237796398|ref|YP_002863950.1| GTP-binding protein Era [Clostridium botulinum Ba4 str. 657] gi|259645941|sp|C3L3F3|ERA_CLOB6 RecName: Full=GTPase Era gi|182675144|gb|EDT87105.1| GTP-binding protein Era [Clostridium botulinum Bf] gi|229262668|gb|ACQ53701.1| GTP-binding protein Era [Clostridium botulinum Ba4 str. 657] Length = 296 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L ++ + K I P TT I+ E + + D PGI K Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGIHKPK 66 Query: 221 HQ 222 H+ Sbjct: 67 HK 68 >gi|71026499|ref|XP_762919.1| hypothetical protein [Theileria parva strain Muguga] gi|68349871|gb|EAN30636.1| hypothetical protein TP03_0795 [Theileria parva] Length = 174 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 4/100 (4%) Query: 3 FLDEAKVYIRSGDGGAGGISFRRE---KFIEFGGPDGGSGGRGGDVWIQATSNLNTLIDF 59 F+D ++ G GG G ++F + + G P GG GG GG V+ + LN DF Sbjct: 23 FVDIKRIKCIGGKGGDGALAFSKHGPHHLLGPGLPVGGRGGNGGSVYAEPIKKLNERSDF 82 Query: 60 R-YQQHFKAQHGEKGMKRNRSGAKGEDVVLTVPVGTQVFE 98 A+HG G G GED++L +P+G+ +++ Sbjct: 83 STIPSVVTAKHGSTGKGNRIRGNNGEDIILKMPIGSLIYK 122 >gi|262304277|gb|ACY44731.1| GTP-binding protein [Peripatus sp. 'Pep'] Length = 280 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 14/41 (34%), Positives = 25/41 (60%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN 250 + DI G++K AH+G G+G+ FL H + H++ E++ Sbjct: 35 IVDIAGLVKGAHEGQGLGNAFLSHIGACDAIFHMIRVFEDD 75 >gi|229032470|ref|ZP_04188438.1| Ferrous iron transport protein B [Bacillus cereus AH1271] gi|228728839|gb|EEL79847.1| Ferrous iron transport protein B [Bacillus cereus AH1271] Length = 657 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 17/165 (10%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAH 221 ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 1 MLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--KQGTLIDLPGVYDLNPVS 58 Query: 222 QGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + G+ FL T+ H +L+IV S E N+ Q + E K + I GL+ Sbjct: 59 RDEGVVTNFL-LTDEFHHMLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-GLN 107 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 +D + L+ + G + +G G ++L L + Sbjct: 108 MVDVAKQRGIVIDVKRLSERLGVTVVPVVARSGKGCEELLATLKE 152 >gi|296125394|ref|YP_003632646.1| GTP-binding proten HflX [Brachyspira murdochii DSM 12563] gi|296017210|gb|ADG70447.1| GTP-binding proten HflX [Brachyspira murdochii DSM 12563] Length = 371 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 16/144 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL---YPNLGIVKEGYKEFILADIPGIIK 218 + I+G NAGKST + + + D F TL L + + E I++D G I Sbjct: 205 VAIVGYTNAGKSTLFNLLCKESVYVEDKLFATLDTHTRKLYLGDDTPVEAIISDTVGFID 264 Query: 219 NA-HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY---QCILDELSAYNSELRKKIE 274 H L +LLH+V A +EN+ + I+ E+ A S +++ Sbjct: 265 RLPHTLVASFKSTLSEVVEADLLLHLVDASDENINNKLIQVESIIKEIDA--SHIKR--- 319 Query: 275 IVGLSQIDTVDSDTLARKKNELAT 298 IV ++ID +D +KN+++T Sbjct: 320 IVVFNKIDNIDE----VQKNKIST 339 >gi|150009039|ref|YP_001303782.1| GTP-binding protein Era [Parabacteroides distasonis ATCC 8503] gi|262383938|ref|ZP_06077074.1| GTP-binding protein Era [Bacteroides sp. 2_1_33B] gi|298375726|ref|ZP_06985682.1| GTP-binding protein Era [Bacteroides sp. 3_1_19] gi|301312103|ref|ZP_07218025.1| GTP-binding protein Era [Bacteroides sp. 20_3] gi|149937463|gb|ABR44160.1| GTP-binding protein Era [Parabacteroides distasonis ATCC 8503] gi|262294836|gb|EEY82768.1| GTP-binding protein Era [Bacteroides sp. 2_1_33B] gi|298266763|gb|EFI08420.1| GTP-binding protein Era [Bacteroides sp. 3_1_19] gi|300830205|gb|EFK60853.1| GTP-binding protein Era [Bacteroides sp. 20_3] Length = 296 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 25/160 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-- 218 + I+G PN GKST + + + I TT + +GIV + + +D PG+++ Sbjct: 10 VNIVGNPNVGKSTLMNRLVGERISIITSKAQTTRHRIMGIVNTDDMQIVYSDTPGVLRPN 69 Query: 219 --------NAHQGA-GIGDRFLKHT------ERTHVLLHIVSALE-------ENVQAAYQ 256 N Q A G D L T ++ + L V ++E + Q Sbjct: 70 YKLQESMLNFSQSALGDADVLLYVTDVVETIDKNNEFLARVQSIECPVLLLINKIDQTNQ 129 Query: 257 CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L++L A EL K EI+ +S + + D + R+ EL Sbjct: 130 PELEKLVAQWKELLPKAEIIPISALSNFNIDYVKRRVEEL 169 >gi|113955090|ref|YP_729987.1| GTP-binding protein Era [Synechococcus sp. CC9311] gi|113882441|gb|ABI47399.1| GTP-binding protein Era [Synechococcus sp. CC9311] Length = 317 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 15/168 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + +IG PN GKST + + K I T L I+ + IL D PGI K Sbjct: 22 VALIGRPNVGKSTLVNQLIGDKIAITSPVAQTTRNRLRAILTTDEAQLILVDTPGIHKPH 81 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQ------CILDELSAYNSELRKKIE 274 H +G+R ++ + V L E +A + +L + S L K + Sbjct: 82 HL---LGERLVRTARSAIGEVDQVLLLLEGCEAPGRGDAFIVQLLRQQSLPVQVLLNKWD 138 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 +V L Q D D+ EL ++ S+++G G P++++ + Sbjct: 139 LVPLEQKDAADA-----AYRELLSETDWPVHRCSALSGDGCPELVKAI 181 >gi|325181428|emb|CCA15844.1| conserved hypothetical protein [Albugo laibachii Nc14] gi|325193041|emb|CCA27412.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 458 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN-LGIVKEGYKEFILADIPGIIK 218 ++ +IG PNAGKS+ + + R+ + T LG++ E + D PG+IK Sbjct: 154 EVAVIGRPNAGKSSIINFLLRSNVSAVSQKYNTTRERVLGVLTEKNTQITFHDTPGLIK 212 >gi|320353432|ref|YP_004194771.1| GTP-binding protein HflX [Desulfobulbus propionicus DSM 2032] gi|320121934|gb|ADW17480.1| GTP-binding protein HflX [Desulfobulbus propionicus DSM 2032] Length = 561 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN 219 I ++G NAGKST L ++T+++ + D F TL P ++ E I+ D G I+N Sbjct: 380 ISLVGYTNAGKSTLLNTLTKSEIQAEDLLFATLDPTSRRLRFPEDMEVIITDTVGFIRN 438 >gi|300862297|ref|ZP_07108377.1| ferrous iron transport protein B [Enterococcus faecalis TUSoD Ef11] gi|300848822|gb|EFK76579.1| ferrous iron transport protein B [Enterococcus faecalis TUSoD Ef11] Length = 716 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 14/163 (8%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 I + G PN+GK+T +T A + ++P T+ G+ K+ K I+ D+PGI + Sbjct: 4 QIALAGNPNSGKTTTFNMLTGANQYVGNWPGVTVERKEGVAKKD-KTLIIQDLPGIYSLS 62 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + I R ++ V+L+I V+ LE N+ Q I L + Sbjct: 63 PYTPEEIVARDYLLEDQPSVILNILDVTNLERNLYLTTQLIETGLPV----------VCA 112 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 L+ +D ++ + +L+ G E S++ G+ L+ Sbjct: 113 LNMMDLLEKNGQTLNSEKLSYGLGVPVVEISALKNRGLDHALK 155 >gi|238650994|ref|YP_002916850.1| GTP-binding protein EngA [Rickettsia peacockii str. Rustic] gi|259645885|sp|C4K2K1|DER_RICPU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238625092|gb|ACR47798.1| GTP-binding protein EngA [Rickettsia peacockii str. Rustic] Length = 447 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 4/76 (5%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST ++ R K + D P T K G EF+L D PG+ +N Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPGVTRDRKYTDGKIGSFEFLLIDTPGLDENP 65 Query: 221 HQGAGIGDRFLKHTER 236 + +G+R ++ T + Sbjct: 66 N---SMGERLIEQTTK 78 >gi|170754569|ref|YP_001782578.1| GTP-binding protein Era [Clostridium botulinum B1 str. Okra] gi|226741200|sp|B1ILK9|ERA_CLOBK RecName: Full=GTPase Era gi|169119781|gb|ACA43617.1| GTP-binding protein Era [Clostridium botulinum B1 str. Okra] gi|322807262|emb|CBZ04836.1| GTP-binding protein Era [Clostridium botulinum H04402 065] Length = 296 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L ++ + K I P TT I+ E + + D PGI K Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGIHKPK 66 Query: 221 HQ 222 H+ Sbjct: 67 HK 68 >gi|298207488|ref|YP_003715667.1| GTP-binding protein HflX [Croceibacter atlanticus HTCC2559] gi|83850124|gb|EAP87992.1| GTP-binding protein HflX [Croceibacter atlanticus HTCC2559] Length = 407 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 14/144 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + + ++G N GKST + ++++++ + F TL + V F+L D G I+ Sbjct: 199 LVRVALVGYTNVGKSTLMNAISKSEVFAENKLFATLDTTVRKVVIRNLPFLLTDTVGFIR 258 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKIE 274 Q L +LLH+V N + A+ ILDE+ + + K Sbjct: 259 KLPTQLVESFKSTLDEVREADLLLHVVDISHHNFEEHIASVNQILDEIDSAD-----KPS 313 Query: 275 IVGLSQID-----TVDSDTLARKK 293 I+ ++ID T+D D L +K Sbjct: 314 IMVFNKIDAYEPETIDEDDLDTEK 337 >gi|67922213|ref|ZP_00515727.1| Small GTP-binding protein domain:GTP-binding [Crocosphaera watsonii WH 8501] gi|67855916|gb|EAM51161.1| Small GTP-binding protein domain:GTP-binding [Crocosphaera watsonii WH 8501] Length = 465 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 19/137 (13%) Query: 161 DIGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--I 217 ++ IIG PN GKS+ L A + + + ++ TT +V+ G K + L D GI Sbjct: 191 NVSIIGRPNVGKSSLLNAFLGKKRAIVSPISGTTRDAIDTVVERGEKTYRLIDTAGIRRK 250 Query: 218 KNAHQGAGIG--DRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRK 271 KN + GA +R K R V+L ++ A+E ++++ A + I+DE A Sbjct: 251 KNVNYGAEFFSINRAFKAIRRADVVLLVIDAIEGVTDQDIKLADR-IIDEGRA------- 302 Query: 272 KIEIVGLSQIDTVDSDT 288 I+ +++ D +D D+ Sbjct: 303 --AIIVVNKWDAIDKDS 317 >gi|65322176|ref|ZP_00395135.1| COG0370: Fe2+ transport system protein B [Bacillus anthracis str. A2012] Length = 662 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 17/167 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 4 VALLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--KQGTLIDLPGVYDLNP 61 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + G+ FL E H +L+IV S E N+ Q + E K + I G Sbjct: 62 VSRDEGVVTNFLLTEEFQH-MLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-G 110 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 L+ ID + L+ G + +G G ++L L + Sbjct: 111 LNMIDVAXXRGIVIDVKRLSELLGVTVVPVVARSGKGCEELLATLKE 157 >gi|260775207|ref|ZP_05884105.1| GTP-binding protein Era [Vibrio coralliilyticus ATCC BAA-450] gi|260608908|gb|EEX35070.1| GTP-binding protein Era [Vibrio coralliilyticus ATCC BAA-450] Length = 324 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +G+ EG + I D PG+ Sbjct: 33 VAIVGRPNVGKSTLLNRILGQKISITSRKPQTTRHRIMGVDTEGDYQAIYVDTPGL 88 >gi|229547637|ref|ZP_04436362.1| ferrous iron transport protein B [Enterococcus faecalis TX1322] gi|256852448|ref|ZP_05557824.1| ferrous iron transporter B [Enterococcus faecalis T8] gi|312900217|ref|ZP_07759529.1| ferrous iron transport protein B [Enterococcus faecalis TX0470] gi|229307129|gb|EEN73116.1| ferrous iron transport protein B [Enterococcus faecalis TX1322] gi|256712302|gb|EEU27334.1| ferrous iron transporter B [Enterococcus faecalis T8] gi|311292578|gb|EFQ71134.1| ferrous iron transport protein B [Enterococcus faecalis TX0470] gi|315028515|gb|EFT40447.1| ferrous iron transport protein B [Enterococcus faecalis TX4000] Length = 716 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 14/163 (8%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 I + G PN+GK+T +T A + ++P T+ G+ K+ K I+ D+PGI + Sbjct: 4 QIALAGNPNSGKTTTFNMLTGANQYVGNWPGVTVERKEGVAKKD-KTLIIQDLPGIYSLS 62 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + I R ++ V+L+I V+ LE N+ Q I L + Sbjct: 63 PYTPEEIVARDYLLEDQPSVILNILDVTNLERNLYLTTQLIETGLPV----------VCA 112 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 L+ +D ++ + +L+ G E S++ G+ L+ Sbjct: 113 LNMMDLLEKNGQTLNSEKLSYGLGVPVVEISALKNRGLDHALK 155 >gi|228955090|ref|ZP_04117105.1| Ferrous iron transport protein B [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228804600|gb|EEM51204.1| Ferrous iron transport protein B [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 176 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 17/165 (10%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAH 221 ++G PN GK++ ++T + + ++ T+ +G +K+ ++ L D+PG+ + Sbjct: 1 MLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--RQGTLIDLPGVYDLNPVS 58 Query: 222 QGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + G+ FL E H +L+IV S E N+ Q + E K + I GL+ Sbjct: 59 RDEGVVTNFLLTEEFNH-MLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-GLN 107 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 +D + L+ G + +G G ++L L + Sbjct: 108 MVDVAKQRGIVIDVKRLSELLGVTVVPVVARSGKGCEELLTTLKE 152 >gi|199582270|gb|ACH89806.1| putative GDP binding protein [Alpheus millsae] Length = 214 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 19/112 (16%) Query: 212 DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCILDE 261 DI G++K A +G G+G+ FL H + + H+ A E+ N + ILDE Sbjct: 1 DIAGLVKGASEGQGLGNAFLSHIKACDAIFHMTRAFEDDDVTHVEGDVNPVRDLEIILDE 60 Query: 262 LSAYNSE--------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 L + E L K +E G ++ + DT+ R K+ L + V F Sbjct: 61 LRLKDIEYINNVWDKLYKLVERGGDKKLKP-EYDTICRVKSLLEEEKRHVRF 111 >gi|159899753|ref|YP_001546000.1| GTP-binding protein Era [Herpetosiphon aurantiacus ATCC 23779] gi|159892792|gb|ABX05872.1| GTP-binding protein Era [Herpetosiphon aurantiacus ATCC 23779] Length = 489 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST L + K I + P TT P GI+ + I D PGI K Sbjct: 200 VALVGKPNVGKSTLLNAYLGQKVSIVSPKPQTTRVPVRGILNGPDAQIIFVDTPGIHKPR 259 Query: 221 HQ 222 H+ Sbjct: 260 HK 261 >gi|51597153|ref|YP_071344.1| GTP-binding protein EngA [Yersinia pseudotuberculosis IP 32953] gi|186896248|ref|YP_001873360.1| GTP-binding protein EngA [Yersinia pseudotuberculosis PB1/+] gi|81825749|sp|Q668A3|DER_YERPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238691441|sp|B2K9P6|DER_YERPB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|51590435|emb|CAH22075.1| putative GTP-binding protein [Yersinia pseudotuberculosis IP 32953] gi|186699274|gb|ACC89903.1| small GTP-binding protein [Yersinia pseudotuberculosis PB1/+] Length = 495 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I I ++G PN GKST +T + +AD+P T G + EFI+ D GI Sbjct: 1 MIPVIALVGRPNVGKSTLFNRLTHTRDALVADFPGLTRDRKYGRAEVEGHEFIVVDTGGI 60 Query: 217 --IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 ++ + G L E ++L +V A + A Q I L + R+K Sbjct: 61 DGTEDGVETKMAGQSLLA-IEEADIVLFMVDA-RAGLMPADQGIAQHLRS-----REKAT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + ++ D +D DT L G+V ++ G G+ Q++E Sbjct: 114 FLVANKTDGIDPDTATADFYSLG--LGEV-HAIAASHGRGVTQLIE 156 >gi|315143977|gb|EFT87993.1| ferrous iron transport protein B [Enterococcus faecalis TX2141] Length = 716 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 14/163 (8%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 I + G PN+GK+T +T A + ++P T+ G+ K+ K I+ D+PGI + Sbjct: 4 QIALAGNPNSGKTTTFNMLTGANQYVGNWPGVTVERKEGVAKKD-KTLIIQDLPGIYSLS 62 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + I R ++ V+L+I V+ LE N+ Q I L + Sbjct: 63 PYTPEEIVARDYLLEDQPSVILNILDVTNLERNLYLTTQLIETGLPV----------VCA 112 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 L+ +D ++ + +L+ G E S++ G+ L+ Sbjct: 113 LNMMDLLEKNGQTLNSEKLSYGLGVPVVEISALKNRGLDHALK 155 >gi|293410925|ref|ZP_06654501.1| ribosome-associated GTPase EngA [Escherichia coli B354] gi|291471393|gb|EFF13877.1| ribosome-associated GTPase EngA [Escherichia coli B354] Length = 499 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 67 Query: 215 GI--IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 GI +N + + ++ L E V+L +V A + A DE A + R+K Sbjct: 68 GIDGTENGVE-TRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREK 120 Query: 273 IEIVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 121 PTFLVANKTDGLDPD 135 >gi|271501620|ref|YP_003334646.1| GTP-binding protein Era [Dickeya dadantii Ech586] gi|270345175|gb|ACZ77940.1| GTP-binding protein Era [Dickeya dadantii Ech586] Length = 301 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 VAIVGRPNVGKSTLLNQLLGQKVSITSRKPQTTRHRIMGIHTEGPYQAIYVDTPGL 66 >gi|255014875|ref|ZP_05287001.1| GTP-binding protein Era [Bacteroides sp. 2_1_7] gi|256840957|ref|ZP_05546464.1| GTP-binding protein Era [Parabacteroides sp. D13] gi|256736800|gb|EEU50127.1| GTP-binding protein Era [Parabacteroides sp. D13] Length = 297 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 25/160 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-- 218 + I+G PN GKST + + + I TT + +GIV + + +D PG+++ Sbjct: 11 VNIVGNPNVGKSTLMNRLVGERISIITSKAQTTRHRIMGIVNTDDMQIVYSDTPGVLRPN 70 Query: 219 --------NAHQGA-GIGDRFLKHT------ERTHVLLHIVSALE-------ENVQAAYQ 256 N Q A G D L T ++ + L V ++E + Q Sbjct: 71 YKLQESMLNFSQSALGDADVLLYVTDVVETIDKNNEFLARVQSIECPVLLLINKIDQTNQ 130 Query: 257 CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNEL 296 L++L A EL K EI+ +S + + D + R+ EL Sbjct: 131 PELEKLVAQWKELLPKAEIIPISALSNFNIDYVKRRVEEL 170 >gi|254839192|pdb|2WJI|A Chain A, Structure And Function Of The Feob G-Domain From Methanococcus Jannaschii gi|254839193|pdb|2WJI|B Chain B, Structure And Function Of The Feob G-Domain From Methanococcus Jannaschii Length = 165 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 +I +IG PN GKST ++T I ++P T+ G + ++F + D+PG+ Sbjct: 5 EIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEKFKVVDLPGVYSLT 64 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCI 258 A+ I R E+ ++++IV +ALE N+ Q + Sbjct: 65 ANSIDEIIARDYIINEKPDLVVNIVDATALERNLYLTLQLM 105 >gi|171779657|ref|ZP_02920613.1| hypothetical protein STRINF_01494 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281759|gb|EDT47193.1| hypothetical protein STRINF_01494 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 412 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 2/103 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKN- 219 IG+IG NAGKST + +T K AD F TL I + + L D G I+N Sbjct: 201 IGLIGYTNAGKSTIMNVLTNDKQYEADELFATLDATTKQIYLQNQFQVTLTDTVGFIQNL 260 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 + L+ +LLH++ A + N + +L+ L Sbjct: 261 PTELVAAFKSTLEENRHVDLLLHVIDASDPNHAEHEKVVLNLL 303 >gi|153941135|ref|YP_001392222.1| GTP-binding protein Era [Clostridium botulinum F str. Langeland] gi|189037261|sp|A7GHG2|ERA_CLOBL RecName: Full=GTPase Era gi|152937031|gb|ABS42529.1| GTP-binding protein Era [Clostridium botulinum F str. Langeland] gi|295320220|gb|ADG00598.1| GTP-binding protein Era [Clostridium botulinum F str. 230613] Length = 296 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L ++ + K I P TT I+ E + + D PGI K Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGIHKPK 66 Query: 221 HQ 222 H+ Sbjct: 67 HK 68 >gi|187731692|ref|YP_001881302.1| GTP-binding protein EngA [Shigella boydii CDC 3083-94] gi|238691721|sp|B2TXT6|DER_SHIB3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|187428684|gb|ACD07958.1| ribosome-associated GTPase EngA [Shigella boydii CDC 3083-94] Length = 490 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 10/133 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G + +EFI D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 60 IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREKPT 113 Query: 275 IVGLSQIDTVDSD 287 + ++ID +D D Sbjct: 114 FLVANKIDGLDPD 126 >gi|22125256|ref|NP_668679.1| GTP-binding protein EngA [Yersinia pestis KIM 10] gi|45442513|ref|NP_994052.1| GTP-binding protein EngA [Yersinia pestis biovar Microtus str. 91001] gi|108808309|ref|YP_652225.1| GTP-binding protein EngA [Yersinia pestis Antiqua] gi|108811426|ref|YP_647193.1| GTP-binding protein EngA [Yersinia pestis Nepal516] gi|145599492|ref|YP_001163568.1| GTP-binding protein EngA [Yersinia pestis Pestoides F] gi|149365335|ref|ZP_01887370.1| putative GTP-binding protein [Yersinia pestis CA88-4125] gi|153948065|ref|YP_001400171.1| GTP-binding protein EngA [Yersinia pseudotuberculosis IP 31758] gi|162419655|ref|YP_001605020.1| GTP-binding protein EngA [Yersinia pestis Angola] gi|165925991|ref|ZP_02221823.1| GTP-binding protein EngA [Yersinia pestis biovar Orientalis str. F1991016] gi|165937070|ref|ZP_02225635.1| GTP-binding protein EngA [Yersinia pestis biovar Orientalis str. IP275] gi|166008076|ref|ZP_02228974.1| GTP-binding protein EngA [Yersinia pestis biovar Antiqua str. E1979001] gi|166212264|ref|ZP_02238299.1| GTP-binding protein EngA [Yersinia pestis biovar Antiqua str. B42003004] gi|167398998|ref|ZP_02304522.1| GTP-binding protein EngA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421200|ref|ZP_02312953.1| GTP-binding protein EngA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423353|ref|ZP_02315106.1| GTP-binding protein EngA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170023543|ref|YP_001720048.1| GTP-binding protein EngA [Yersinia pseudotuberculosis YPIII] gi|218929935|ref|YP_002347810.1| GTP-binding protein EngA [Yersinia pestis CO92] gi|229838454|ref|ZP_04458613.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895156|ref|ZP_04510332.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis Pestoides A] gi|229899021|ref|ZP_04514165.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis biovar Orientalis str. India 195] gi|229901683|ref|ZP_04516805.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis Nepal516] gi|270489878|ref|ZP_06206952.1| ribosome-associated GTPase EngA [Yersinia pestis KIM D27] gi|294504563|ref|YP_003568625.1| GTP-binding protein EngA [Yersinia pestis Z176003] gi|26006726|sp|Q8ZCT9|DER_YERPE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|123246587|sp|Q1CK87|DER_YERPN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|123372277|sp|Q1C5J2|DER_YERPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166225935|sp|A4TMT3|DER_YERPP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166920105|sp|A7FFZ3|DER_YERP3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238687331|sp|A9R7Z8|DER_YERPG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238688573|sp|B1JSA4|DER_YERPY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|21958127|gb|AAM84930.1|AE013738_7 putative GTP-binding factor [Yersinia pestis KIM 10] gi|45437378|gb|AAS62929.1| putative GTP-binding protein [Yersinia pestis biovar Microtus str. 91001] gi|108775074|gb|ABG17593.1| GTP-binding protein [Yersinia pestis Nepal516] gi|108780222|gb|ABG14280.1| putative GTP-binding protein [Yersinia pestis Antiqua] gi|115348546|emb|CAL21486.1| putative GTP-binding protein [Yersinia pestis CO92] gi|145211188|gb|ABP40595.1| GTP-binding protein [Yersinia pestis Pestoides F] gi|149291748|gb|EDM41822.1| putative GTP-binding protein [Yersinia pestis CA88-4125] gi|152959560|gb|ABS47021.1| GTP-binding protein EngA [Yersinia pseudotuberculosis IP 31758] gi|162352470|gb|ABX86418.1| GTP-binding protein EngA [Yersinia pestis Angola] gi|165914933|gb|EDR33545.1| GTP-binding protein EngA [Yersinia pestis biovar Orientalis str. IP275] gi|165922195|gb|EDR39372.1| GTP-binding protein EngA [Yersinia pestis biovar Orientalis str. F1991016] gi|165992458|gb|EDR44759.1| GTP-binding protein EngA [Yersinia pestis biovar Antiqua str. E1979001] gi|166206195|gb|EDR50675.1| GTP-binding protein EngA [Yersinia pestis biovar Antiqua str. B42003004] gi|166960689|gb|EDR56710.1| GTP-binding protein EngA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051502|gb|EDR62910.1| GTP-binding protein EngA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057523|gb|EDR67269.1| GTP-binding protein EngA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750077|gb|ACA67595.1| small GTP-binding protein [Yersinia pseudotuberculosis YPIII] gi|229681612|gb|EEO77706.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis Nepal516] gi|229687966|gb|EEO80038.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis biovar Orientalis str. India 195] gi|229694820|gb|EEO84867.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701918|gb|EEO89941.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis Pestoides A] gi|262362442|gb|ACY59163.1| GTP-binding protein EngA [Yersinia pestis D106004] gi|262366551|gb|ACY63108.1| GTP-binding protein EngA [Yersinia pestis D182038] gi|270338382|gb|EFA49159.1| ribosome-associated GTPase EngA [Yersinia pestis KIM D27] gi|294355022|gb|ADE65363.1| GTP-binding protein EngA [Yersinia pestis Z176003] gi|320016011|gb|ADV99582.1| ferrous iron transport protein B [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 495 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 13/166 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I I ++G PN GKST +T + +AD+P T G + EFI+ D GI Sbjct: 1 MIPVIALVGRPNVGKSTLFNRLTHTRDALVADFPGLTRDRKYGRAEVEGHEFIVVDTGGI 60 Query: 217 --IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 ++ + G L E ++L +V A + A Q I L + R+K Sbjct: 61 DGTEDGVETKMAGQSLLA-IEEADIVLFMVDA-RAGLMPADQGIAQHLRS-----REKAT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + ++ D +D DT L G+V ++ G G+ Q++E Sbjct: 114 FLVANKTDGIDPDTATADFYSLG--LGEV-HAIAASHGRGVTQLIE 156 >gi|298490944|ref|YP_003721121.1| GTP-binding proten HflX ['Nostoc azollae' 0708] gi|298232862|gb|ADI63998.1| GTP-binding proten HflX ['Nostoc azollae' 0708] Length = 583 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 13/146 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGIVKEGYKEF---ILAD 212 + + ++G NAGKST L ++T A+ AD F TL P L I G E ++ D Sbjct: 408 VPSVALVGYTNAGKSTLLNALTNAEVYTADQLFATLDPTTRRLIIPHVGTSELQETLITD 467 Query: 213 IPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 G I + D F L+ L+H+V + + + D L+ + Sbjct: 468 TVGFIHELPN--SLMDAFRATLEEVTEADALIHLVDLSHPAWLSHIRSVRDILA--QMPI 523 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNE 295 +V ++ID VDS+ LA + E Sbjct: 524 TPGPCLVVFNKIDQVDSEALALAREE 549 >gi|261839651|gb|ACX99416.1| GTP-binding protein Era [Helicobacter pylori 52] Length = 301 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 25/173 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYK-EFILADIPG 215 + +IG PNAGKST L ++ A + + + + KEGY+ + I D PG Sbjct: 8 VALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPG 67 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS--ELRKKI 273 + HQ ++ L + L + A + + D+L Y L +K Sbjct: 68 L---HHQ-----EKLLNQCMLSQALKAMGDA---ELCVFLASVHDDLKGYEEFLSLCQKP 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECL 322 I+ LS+IDT + +K E Q VP S+ + +LEC+ Sbjct: 117 HILALSKIDTATHKQVLQKLQEYQQYDSQFLALVP--LSAKKSQNLNALLECI 167 >gi|257080139|ref|ZP_05574500.1| Fe2+ transport system protein B [Enterococcus faecalis JH1] gi|294780709|ref|ZP_06746070.1| ferrous iron transport protein B [Enterococcus faecalis PC1.1] gi|256988169|gb|EEU75471.1| Fe2+ transport system protein B [Enterococcus faecalis JH1] gi|294452319|gb|EFG20760.1| ferrous iron transport protein B [Enterococcus faecalis PC1.1] Length = 716 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 14/163 (8%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 I + G PN+GK+T +T A + ++P T+ G+ K+ K I+ D+PGI + Sbjct: 4 QIALAGNPNSGKTTTFNMLTGANQYVGNWPGVTVERKEGVAKKD-KTLIIQDLPGIYSLS 62 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + I R ++ V+L+I V+ LE N+ Q I L + Sbjct: 63 PYTPEEIVARDYLLEDQPSVILNILDVTNLERNLYLTTQLIETGLPV----------VCA 112 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 L+ +D ++ + +L+ G E S++ G+ L+ Sbjct: 113 LNMMDLLEKNGQTLNSEKLSYGLGVPVVEISALKNRGLDHALK 155 >gi|254839187|pdb|2WJG|A Chain A, Structure And Function Of The Feob G-Domain From Methanococcus Jannaschii gi|254839188|pdb|2WJG|B Chain B, Structure And Function Of The Feob G-Domain From Methanococcus Jannaschii Length = 188 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 +I +IG PN GKST ++T I ++P T+ G + ++F + D+PG+ Sbjct: 9 EIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEKFKVVDLPGVYSLT 68 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCI 258 A+ I R E+ ++++IV +ALE N+ Q + Sbjct: 69 ANSIDEIIARDYIINEKPDLVVNIVDATALERNLYLTLQLM 109 >gi|238920904|ref|YP_002934419.1| GTP-binding protein Era [Edwardsiella ictaluri 93-146] gi|269140066|ref|YP_003296767.1| GTP-binding protein [Edwardsiella tarda EIB202] gi|238870473|gb|ACR70184.1| GTP-binding protein Era, putative [Edwardsiella ictaluri 93-146] gi|267985727|gb|ACY85556.1| GTP-binding protein [Edwardsiella tarda EIB202] gi|304559894|gb|ADM42558.1| GTP-binding protein Era [Edwardsiella tarda FL6-60] Length = 301 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 IAIVGRPNVGKSTLLNQLLGQKISITSRKPQTTRHRIMGIHTEGPYQAIYVDTPGL 66 >gi|229548400|ref|ZP_04437125.1| ferrous iron transport protein B [Enterococcus faecalis ATCC 29200] gi|255971028|ref|ZP_05421614.1| Fe2+ transport system protein B [Enterococcus faecalis T1] gi|255973541|ref|ZP_05424127.1| Fe2+ transport system protein B [Enterococcus faecalis T2] gi|256617393|ref|ZP_05474239.1| Fe2+ transport system protein B [Enterococcus faecalis ATCC 4200] gi|256963243|ref|ZP_05567414.1| Fe2+ transport system protein B [Enterococcus faecalis HIP11704] gi|257085828|ref|ZP_05580189.1| Fe2+ transport system protein B [Enterococcus faecalis D6] gi|257415192|ref|ZP_05592186.1| Fe2+ transport system protein B [Enterococcus faecalis AR01/DG] gi|257418247|ref|ZP_05595241.1| Fe2+ transport system protein B [Enterococcus faecalis T11] gi|257420754|ref|ZP_05597744.1| ferrous iron transporter B [Enterococcus faecalis X98] gi|307268563|ref|ZP_07549935.1| ferrous iron transport protein B [Enterococcus faecalis TX4248] gi|307272286|ref|ZP_07553546.1| ferrous iron transport protein B [Enterococcus faecalis TX0855] gi|307275551|ref|ZP_07556692.1| ferrous iron transport protein B [Enterococcus faecalis TX2134] gi|307282788|ref|ZP_07562988.1| ferrous iron transport protein B [Enterococcus faecalis TX0860] gi|307290611|ref|ZP_07570519.1| ferrous iron transport protein B [Enterococcus faecalis TX0411] gi|312952111|ref|ZP_07770992.1| ferrous iron transport protein B [Enterococcus faecalis TX0102] gi|229306616|gb|EEN72612.1| ferrous iron transport protein B [Enterococcus faecalis ATCC 29200] gi|255962046|gb|EET94522.1| Fe2+ transport system protein B [Enterococcus faecalis T1] gi|255966413|gb|EET97035.1| Fe2+ transport system protein B [Enterococcus faecalis T2] gi|256596920|gb|EEU16096.1| Fe2+ transport system protein B [Enterococcus faecalis ATCC 4200] gi|256953739|gb|EEU70371.1| Fe2+ transport system protein B [Enterococcus faecalis HIP11704] gi|256993858|gb|EEU81160.1| Fe2+ transport system protein B [Enterococcus faecalis D6] gi|257157020|gb|EEU86980.1| Fe2+ transport system protein B [Enterococcus faecalis ARO1/DG] gi|257160075|gb|EEU90035.1| Fe2+ transport system protein B [Enterococcus faecalis T11] gi|257162578|gb|EEU92538.1| ferrous iron transporter B [Enterococcus faecalis X98] gi|306498325|gb|EFM67834.1| ferrous iron transport protein B [Enterococcus faecalis TX0411] gi|306503644|gb|EFM72875.1| ferrous iron transport protein B [Enterococcus faecalis TX0860] gi|306507656|gb|EFM76785.1| ferrous iron transport protein B [Enterococcus faecalis TX2134] gi|306511175|gb|EFM80185.1| ferrous iron transport protein B [Enterococcus faecalis TX0855] gi|306515052|gb|EFM83595.1| ferrous iron transport protein B [Enterococcus faecalis TX4248] gi|310629893|gb|EFQ13176.1| ferrous iron transport protein B [Enterococcus faecalis TX0102] gi|315026262|gb|EFT38194.1| ferrous iron transport protein B [Enterococcus faecalis TX2137] gi|315032241|gb|EFT44173.1| ferrous iron transport protein B [Enterococcus faecalis TX0017] gi|315146925|gb|EFT90941.1| ferrous iron transport protein B [Enterococcus faecalis TX4244] gi|315153937|gb|EFT97953.1| ferrous iron transport protein B [Enterococcus faecalis TX0031] gi|315154998|gb|EFT99014.1| ferrous iron transport protein B [Enterococcus faecalis TX0043] gi|315158784|gb|EFU02801.1| ferrous iron transport protein B [Enterococcus faecalis TX0312] gi|315167734|gb|EFU11751.1| ferrous iron transport protein B [Enterococcus faecalis TX1341] gi|315170806|gb|EFU14823.1| ferrous iron transport protein B [Enterococcus faecalis TX1342] gi|315173864|gb|EFU17881.1| ferrous iron transport protein B [Enterococcus faecalis TX1346] gi|323479613|gb|ADX79052.1| ferrous iron transport protein feoB [Enterococcus faecalis 62] gi|327534213|gb|AEA93047.1| FeoB family ferrous iron (Fe2+) uptake protein [Enterococcus faecalis OG1RF] gi|329575040|gb|EGG56592.1| ferrous iron transport protein B [Enterococcus faecalis TX1467] Length = 716 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 14/163 (8%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 I + G PN+GK+T +T A + ++P T+ G+ K+ K I+ D+PGI + Sbjct: 4 QIALAGNPNSGKTTTFNMLTGANQYVGNWPGVTVERKEGVAKKD-KTLIIQDLPGIYSLS 62 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + I R ++ V+L+I V+ LE N+ Q I L + Sbjct: 63 PYTPEEIVARDYLLEDQPSVILNILDVTNLERNLYLTTQLIETGLPV----------VCA 112 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 L+ +D ++ + +L+ G E S++ G+ L+ Sbjct: 113 LNMMDLLEKNGQTLNSEKLSYGLGVPVVEISALKNRGLDHALK 155 >gi|168179376|ref|ZP_02614040.1| GTP-binding protein Era [Clostridium botulinum NCTC 2916] gi|182669495|gb|EDT81471.1| GTP-binding protein Era [Clostridium botulinum NCTC 2916] Length = 296 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST L ++ + K I P TT I+ E + + D PGI K Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEKLSIVSCRPQTTRNNIQTILTEDNYQLVFVDTPGIHKPK 66 Query: 221 HQ 222 H+ Sbjct: 67 HK 68 >gi|119478241|ref|ZP_01618297.1| GTP-binding protein, HSR1-related [marine gamma proteobacterium HTCC2143] gi|119448750|gb|EAW29994.1| GTP-binding protein, HSR1-related [marine gamma proteobacterium HTCC2143] Length = 443 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + ++G NAGKST + ++T ++ +A+ F TL + + E ++ D G IKN Sbjct: 219 VALVGYTNAGKSTLMRALTGSEVLVANQLFATLDTKVRTLHPESVPRVLVTDTVGFIKNL 278 Query: 221 HQG-AGIGDRFLKHTERTHVLLHIVSA 246 G L +LLH+V A Sbjct: 279 PHGLVASFKSTLDEALSASLLLHVVDA 305 >gi|121997462|ref|YP_001002249.1| GTP-binding protein, HSR1-like [Halorhodospira halophila SL1] gi|121588867|gb|ABM61447.1| GTP-binding protein HflX [Halorhodospira halophila SL1] Length = 445 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 18/172 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + ++G NAGKST VT ++ + D F TL P+ V +++D G I Sbjct: 218 VSLVGYTNAGKSTLFNHVTGSQRRAEDRLFATLDPSWRRVDLARGSAAVVSDTVGFISRL 277 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKIEIV 276 H L+ +LLH++ A E + + +L EL A + Sbjct: 278 PHDLVAAFRSTLEEVTDADLLLHVIDAGAEEREHQIEQVEAVLAELGADA--------VP 329 Query: 277 GLSQIDTVDSDTLA--RKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 L + VD+ LA R +++ G S+ TG G+ +LE + +++ Sbjct: 330 TLRVYNKVDTCALAPGRIEDDEGLVTG---VRISAATGEGVETLLEAVAERL 378 >gi|300920666|ref|ZP_07137077.1| ribosome-associated GTPase EngA [Escherichia coli MS 115-1] gi|300412347|gb|EFJ95657.1| ribosome-associated GTPase EngA [Escherichia coli MS 115-1] Length = 499 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 13/168 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 67 Query: 215 GIIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 68 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREK 120 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + ++ D +D D L G++ + ++ G G+ +LE Sbjct: 121 PTFLVANKTDGLDPDQAVVDFYSLG--LGEI-YPIAACHGRGVLSLLE 165 >gi|297517161|ref|ZP_06935547.1| GTP-binding protein EngA [Escherichia coli OP50] Length = 202 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 67 Query: 215 GIIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 68 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREK 120 Query: 273 IEIVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 121 PTFLVANKTDGLDPD 135 >gi|256761396|ref|ZP_05501976.1| Fe2+ transport system protein B [Enterococcus faecalis T3] gi|256682647|gb|EEU22342.1| Fe2+ transport system protein B [Enterococcus faecalis T3] Length = 716 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 14/163 (8%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 I + G PN+GK+T +T A + ++P T+ G+ K+ K I+ D+PGI + Sbjct: 4 QIALAGNPNSGKTTTFNMLTGANQYVGNWPGVTVERKEGVAKKD-KTLIIQDLPGIYSLS 62 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + I R ++ V+L+I V+ LE N+ Q I L + Sbjct: 63 PYTPEEIVARDYLLEDQPSVILNILDVTNLERNLYLTTQLIETGLPV----------VCA 112 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 L+ +D ++ + +L+ G E S++ G+ L+ Sbjct: 113 LNMMDLLEKNGQTLNSEKLSYGLGVPVVEISALKNRGLDHALK 155 >gi|268593249|ref|ZP_06127470.1| GTP-binding protein Era [Providencia rettgeri DSM 1131] gi|291311144|gb|EFE51597.1| GTP-binding protein Era [Providencia rettgeri DSM 1131] Length = 302 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 26/139 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI---- 216 + I+G PN GKST L + K I P TT + +GI E + I D PG+ Sbjct: 11 VAIVGRPNVGKSTLLNQLLGQKVSITSRKPQTTRHRIMGIHTEDNYQIIYVDTPGLHIEE 70 Query: 217 ------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR 270 + N + IGD +++ +V N A + +L +LS+ + Sbjct: 71 KRAINRLMNRAASSSIGD--------VELVIFVVEG--TNWTADDEMVLTKLSSLRCPV- 119 Query: 271 KKIEIVGLSQIDTVDSDTL 289 I+ +++ID V T+ Sbjct: 120 ----ILAINKIDNVTDKTI 134 >gi|212636522|ref|YP_002313047.1| GTP-binding protein Era [Shewanella piezotolerans WP3] gi|212558006|gb|ACJ30460.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein Era [Shewanella piezotolerans WP3] Length = 330 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I + P TT + +GI +G ++ + D PG+ Sbjct: 39 VAIVGRPNVGKSTLLNKLLGQKISITSKKPQTTRHRIMGIHTDGPRQVVFIDTPGL 94 >gi|159472148|ref|XP_001694213.1| nucleolar GTP-binding protein [Chlamydomonas reinhardtii] gi|158276876|gb|EDP02646.1| nucleolar GTP-binding protein [Chlamydomonas reinhardtii] Length = 189 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 12/35 (34%), Positives = 23/35 (65%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTT 193 + + ++G PN GKS+ + ++ P++ +YPFTT Sbjct: 106 LPTLALVGAPNVGKSSLVQVLSSGTPEVCNYPFTT 140 >gi|152988635|ref|YP_001350265.1| ferrous iron transport protein B [Pseudomonas aeruginosa PA7] gi|150963793|gb|ABR85818.1| ferrous iron transport protein B [Pseudomonas aeruginosa PA7] Length = 766 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 19/171 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG------ 215 +G+IG PN+GK+T +T ++ ++ ++ T+ G L D+PG Sbjct: 6 LGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGAFHTARHAVRLVDLPGTYSLTS 65 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKI 273 + A I R++ E VL+++V A LE N+ Q L E+ Sbjct: 66 VSAQASLDEQIACRYIASGE-VDVLVNVVDAANLERNLYLTVQ--LREMGIPC------- 115 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 IV L+ +D S + +ELA + G S GI ++ + D Sbjct: 116 -IVALNMLDIARSQRIRIDIDELARRLGCPVVPLVSTRADGIDELKAAIDD 165 >gi|49474067|ref|YP_032109.1| GTP-binding protein Era [Bartonella quintana str. Toulouse] gi|49239571|emb|CAF25928.1| GTP-binding protein era homolog [Bartonella quintana str. Toulouse] Length = 301 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 19/169 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI---- 216 + +IG+PNAGKST + + K I + TT GIV + +L D PG+ Sbjct: 12 VVLIGMPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLVRGIVIHDNTQIVLIDTPGVFRPH 71 Query: 217 --IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 ++ A A G K + VL+ S L + V C + ++ E K+ + Sbjct: 72 KRLERAMVSAAWGGA--KSADVLLVLIDAHSGLSDEV-----CTMLDI----VENIKQDK 120 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQV-PFEFSSITGHGIPQILECL 322 I+ L++IDTV +L ++ + + F S+++G G +L L Sbjct: 121 ILVLNKIDTVAKLSLLALTAQINERVKFLQTFMISALSGSGCKDLLHAL 169 >gi|320534204|ref|ZP_08034727.1| GTP-binding protein Era [Actinomyces sp. oral taxon 171 str. F0337] gi|320133581|gb|EFW26006.1| GTP-binding protein Era [Actinomyces sp. oral taxon 171 str. F0337] Length = 392 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 8/129 (6%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIK-NAH 221 I+G PNAGKST ++ AK I P TT + G++ + + +L D PG+ + Sbjct: 98 IVGRPNAGKSTLTNALVGAKIAITSGRPQTTRHNVRGVIHQDNAQIVLVDTPGLHRPRTL 157 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQI 281 G + D + V++ V A E + + I +L +ELR + V +++ Sbjct: 158 LGKRLNDLVRETLTDVDVVVFCVPA-NEKIGPGDRFITRDL----AELRTPVVAV-VTKA 211 Query: 282 DTVDSDTLA 290 DTV + LA Sbjct: 212 DTVTREALA 220 >gi|307132117|ref|YP_003884133.1| membrane-associated, 16S rRNA-binding GTPase [Dickeya dadantii 3937] gi|306529646|gb|ADM99576.1| membrane-associated, 16S rRNA-binding GTPase [Dickeya dadantii 3937] Length = 301 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 VAIVGRPNVGKSTLLNQLLGQKVSITSRKPQTTRHRIMGIHTEGPYQAIYVDTPGL 66 >gi|227328580|ref|ZP_03832604.1| GTP-binding protein Era [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 301 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 VAIVGRPNVGKSTLLNQLLGQKISITSRKPQTTRHRIMGIHTEGPYQAIYVDTPGL 66 >gi|199582244|gb|ACH89793.1| putative GDP binding protein [Alpheus bouvieri] Length = 218 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + + H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDAIFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE--------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 DEL + E L K +E G ++ + DT+ R K+ L + V F Sbjct: 63 DELRLKDIEYINNVWDKLYKLVERGGDKKLKP-EYDTVCRVKSLLEEEKRHVRF 115 >gi|157964826|ref|YP_001499650.1| GTP-binding protein EngA [Rickettsia massiliae MTU5] gi|157844602|gb|ABV85103.1| GTP-binding protein [Rickettsia massiliae MTU5] Length = 483 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 4/76 (5%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST ++ R K + D P T K G EF+L D PG+ +N Sbjct: 42 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPGVTRDRKYTDGKIGSFEFLLIDTPGLDENP 101 Query: 221 HQGAGIGDRFLKHTER 236 + +G+R ++ T + Sbjct: 102 N---SMGERLMEQTTK 114 >gi|118443488|ref|YP_878327.1| GTP-binding protein EngA [Clostridium novyi NT] gi|166224330|sp|A0Q125|DER_CLONN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|118133944|gb|ABK60988.1| GTP-binding protein engA [Clostridium novyi NT] Length = 438 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 21/175 (12%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I +IG PN GKS+ + + K +++ P TT V+ +F+L D G+ + + Sbjct: 179 IAMIGRPNVGKSSLINKILGEEKHIVSNIPGTTRDAVDSYVETEEGKFVLIDTAGLRRKS 238 Query: 221 HQGAGI----GDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + R L E V + ++ A E+ + + I Y E+ K I +V Sbjct: 239 KIKEQVERYSAVRTLASIENADVCILMIDATEDIAEQDERII-----GYAHEINKAI-LV 292 Query: 277 GLSQIDTVDSD--TLARKKNELATQCGQVPFE----FSSITGHGIPQIL----EC 321 +++ D ++ D T+ K++L T+ +P+ S+ TG + ++L EC Sbjct: 293 IVNKWDLIEKDDKTMKNFKDKLRTKLSFLPYASFLFISAKTGQRVHKVLGMAKEC 347 >gi|117624740|ref|YP_853653.1| GTP-binding protein EngA [Escherichia coli APEC O1] gi|237705021|ref|ZP_04535502.1| GTP-binding protein EngA [Escherichia sp. 3_2_53FAA] gi|91073411|gb|ABE08292.1| probable GTP-binding protein EngA [Escherichia coli UTI89] gi|115513864|gb|ABJ01939.1| putative GTP-binding protein EngA [Escherichia coli APEC O1] gi|226901387|gb|EEH87646.1| GTP-binding protein EngA [Escherichia sp. 3_2_53FAA] Length = 503 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 12 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 71 Query: 215 GIIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 72 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPA------DEAIAKHLRSREK 124 Query: 273 IEIVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 125 PTFLVANKTDGLDPD 139 >gi|326624338|gb|EGE30683.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 504 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 13 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTG 72 Query: 215 GI 216 GI Sbjct: 73 GI 74 >gi|227112906|ref|ZP_03826562.1| GTP-binding protein Era [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 301 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 VAIVGRPNVGKSTLLNQLLGQKISITSRKPQTTRHRIMGIHTEGPYQAIYVDTPGL 66 >gi|189219062|ref|YP_001939703.1| Fe2+ transport system protein B [Methylacidiphilum infernorum V4] gi|189185920|gb|ACD83105.1| Fe2+ transport system protein B [Methylacidiphilum infernorum V4] Length = 705 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 28/155 (18%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI-LADIPGIIKNAH 221 ++G PN+GK+T ++T + KIA+YP T+ +G+ + E + D+PG Sbjct: 23 ALVGNPNSGKTTLFNALTGLRQKIANYPGVTVEKKVGVFYNLHGEKCQIIDLPGTYS--- 79 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQA--AYQCILD----ELSAYNSELRKKIE- 274 L H+ + ++ L E+ A CI+D E S Y ++E Sbjct: 80 --------LLPHSPDEKITTEVLLGLREDTPKPDAVICIVDASNLERSLYLVSQILELEL 131 Query: 275 --IVGLSQID-------TVDSDTLARKKNELATQC 300 +V L+ ID +D L++K N C Sbjct: 132 PVVVALNMIDELAAKGWEIDFKALSQKFNCPVVPC 166 >gi|5199325|gb|AAD40807.1|AF145049_8 ATP/GTP-binding protein [Streptomyces fradiae] Length = 425 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 1/89 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I + + G NAGKS+ L +T A + D F TL P + V+ G + L D G + Sbjct: 199 IPSVALAGYTNAGKSSLLNRLTGADVLVKDALFATLDPTVRRVRAGGRVCTLTDTVGFVS 258 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSA 246 H L+ ++LH+V + Sbjct: 259 RLPHHLVDAFRSTLEEVTEADLVLHVVDS 287 >gi|29375106|ref|NP_814259.1| ferrous iron transport protein B [Enterococcus faecalis V583] gi|29342565|gb|AAO80330.1| ferrous iron transport protein B [Enterococcus faecalis V583] gi|315574916|gb|EFU87107.1| ferrous iron transport protein B [Enterococcus faecalis TX0309B] gi|315582363|gb|EFU94554.1| ferrous iron transport protein B [Enterococcus faecalis TX0309A] Length = 716 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 14/163 (8%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 I + G PN+GK+T +T A + ++P T+ G+ K+ K I+ D+PGI + Sbjct: 4 QIALAGNPNSGKTTTFNMLTGANQYVGNWPGVTVERKEGVAKKD-KTLIIQDLPGIYSLS 62 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + I R ++ V+L+I V+ LE N+ Q I L + Sbjct: 63 PYTPEEIVARDYLLEDQPSVILNILDVTNLERNLYLTTQLIETGLPV----------VCA 112 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 L+ +D ++ + +L+ G E S++ G+ L+ Sbjct: 113 LNMMDLLEKNGQTLNSEKLSYGLGVPVVEISALKNRGLDHALK 155 >gi|296863534|pdb|3KXK|A Chain A, Crystal Structure Of Ssgbp Mutation Variant G235p gi|296863535|pdb|3KXK|B Chain B, Crystal Structure Of Ssgbp Mutation Variant G235p Length = 364 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 22/183 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 I IGI+G N+GK++ S+T K+ FTT+ P + ++ +L D I+ Sbjct: 179 IPSIGIVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMSPKRYAIPINNRKIMLVDTVPFIR 238 Query: 219 NAHQGAGIGDRF---LKHTERTHVLLHIVSA------LEENVQAAYQCILDELSAYNSEL 269 I D F L + + L+ ++ + L E +Q++++ IL E+ + Sbjct: 239 GI--PPQIVDAFFVTLSEAKYSDALILVIDSTFSENLLIETLQSSFE-ILREIGVSGKPI 295 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFE--FSSITGHGIPQI-LECLHDKI 326 +V L++ID ++ D KK +L + + + F I + + LE L DKI Sbjct: 296 -----LVTLNKIDKINGD--LYKKLDLVEKLSKELYSPIFDVIPISALKRTNLELLRDKI 348 Query: 327 FSI 329 + + Sbjct: 349 YQL 351 >gi|218886117|ref|YP_002435438.1| ferrous iron transporter B [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757071|gb|ACL07970.1| ferrous iron transport protein B [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 759 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 3/100 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 + + G PN+GK+T T ++ + +YP T+ GI + +E + D+PG A Sbjct: 7 VALAGNPNSGKTTAFNEYTGSRQHVGNYPGITVEKKEGIARVDGREVRVVDLPGTYSLTA 66 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVS--ALEENVQAAYQCI 258 + + R + +R V++ +++ ALE N+ A Q + Sbjct: 67 YTQEEVVARRVLVEDRPDVVIDVINAGALERNLYLAVQLM 106 >gi|254173129|ref|ZP_04879802.1| GTP-binding proten HflX [Thermococcus sp. AM4] gi|214032538|gb|EEB73367.1| GTP-binding proten HflX [Thermococcus sp. AM4] Length = 428 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 17/127 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G NAGKST L ++ + D FTTL K G K +L D G I N Sbjct: 188 IALAGYTNAGKSTLLNALAGESAEARDQMFTTLDTRTRRFKLGRKRVLLTDTVGFIDNLP 247 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI--EIVGLS 279 F+ E H S LEE V+A ++ ++S +E+R+K+ I L Sbjct: 248 P-------FI--VEAFH------STLEEIVKADIVLLVLDVSEPWAEVRRKLMASIDVLR 292 Query: 280 QIDTVDS 286 ++ T+D Sbjct: 293 ELKTLDK 299 >gi|206579507|ref|YP_002237139.1| GTP-binding protein EngA [Klebsiella pneumoniae 342] gi|206568565|gb|ACI10341.1| GTP-binding protein EngA [Klebsiella pneumoniae 342] Length = 498 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 4/98 (4%) Query: 152 IWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFIL 210 ++ +I + ++G PN GKST +TR + +AD+P T G + +EFI Sbjct: 1 MYEAFNMIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIC 60 Query: 211 ADIPGIIKNAHQG--AGIGDRFLKHTERTHVLLHIVSA 246 D G I +G + ++ L E V+L +V A Sbjct: 61 IDTGG-IDGTEEGVETRMAEQSLLAIEEADVVLFMVDA 97 >gi|199582324|gb|ACH89833.1| putative GDP binding protein [Alpheus cristulifrons] Length = 218 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + + H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDAIFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE--------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 DEL + E L K +E G ++ + DT+ R K+ L + V F Sbjct: 63 DELRLKDIEYITNVYDKLYKLVERGGDKKLKP-EYDTICRVKSLLEEEKRHVRF 115 >gi|218781934|ref|YP_002433252.1| GTP-binding protein EngA [Desulfatibacillum alkenivorans AK-01] gi|226741134|sp|B8FM51|DER_DESAA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|218763318|gb|ACL05784.1| small GTP-binding protein [Desulfatibacillum alkenivorans AK-01] Length = 445 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 65/240 (27%), Positives = 107/240 (44%), Gaps = 36/240 (15%) Query: 104 LICDLDQEGQRIILAPGGNGGFGNAHFKSSTNQAPYYANPGILGQEKIIWLKLKLIADIG 163 L+ D + G + G G+G F + A+P + +E +I IG Sbjct: 128 LMADFAELGVDKLHPVSGEHGYGVPTFLDMVVKVLPKASPKL--EEDMI--------SIG 177 Query: 164 IIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI-----I 217 ++G PNAGKS+ + + + + ++D P TT + + K ++L D GI + Sbjct: 178 VVGRPNAGKSSLINKILGQERLLVSDTPGTTRDAVDTVCQVNGKPYLLLDTAGIRRKGKV 237 Query: 218 KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDE---LSAYNSELRKKIE 274 K+ + I R LK ER V L ++ A E I D+ ++ Y E RK Sbjct: 238 KHKLEKFSIV-RALKGLERCDVALVMLDATE--------GITDQDVHIAGYAEE-RKCGC 287 Query: 275 IVGLSQIDTV-DSD-TLARKKNEL---ATQCGQVPF-EFSSITGHGIPQILECLHDKIFS 328 I ++ D V D D L + K+E+ A PF S++TG + +I E L DK+++ Sbjct: 288 IFLANKWDLVKDKDWALKKIKDEVRMNAKFLNYAPFMTISALTGQRVNRIFE-LVDKVYA 346 >gi|217974268|ref|YP_002359019.1| GTP-binding protein Era [Shewanella baltica OS223] gi|304409363|ref|ZP_07390983.1| GTP-binding protein Era [Shewanella baltica OS183] gi|307303721|ref|ZP_07583474.1| GTP-binding protein Era [Shewanella baltica BA175] gi|217499403|gb|ACK47596.1| GTP-binding protein Era [Shewanella baltica OS223] gi|304351881|gb|EFM16279.1| GTP-binding protein Era [Shewanella baltica OS183] gi|306912619|gb|EFN43042.1| GTP-binding protein Era [Shewanella baltica BA175] Length = 338 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + IIG PN GKST + + K I + P TT + +GI +G K+ + D PG+ Sbjct: 47 VAIIGRPNVGKSTLINRLLGQKVSITSKKPQTTRHRIMGIHTDGPKQIVFIDTPGL 102 >gi|46199327|ref|YP_004994.1| GTP-binding protein EngA [Thermus thermophilus HB27] gi|46196952|gb|AAS81367.1| GTP-binding protein [Thermus thermophilus HB27] Length = 431 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 1/97 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKS+ + + + + AD P T G+V+ F+L D G+ Sbjct: 4 VVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETDRGRFLLVDTGGLWSGD 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 I ++ + E V+L V E QA Y+ Sbjct: 64 KWEKKIQEKVDRALEDAEVVLFAVDGRAELTQADYEV 100 >gi|55981360|ref|YP_144657.1| GTP-binding protein EngA [Thermus thermophilus HB8] gi|55772773|dbj|BAD71214.1| GTP-binding protein [Thermus thermophilus HB8] Length = 431 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 1/97 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKS+ + + + + AD P T G+V+ F+L D G+ Sbjct: 4 VVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETDRGRFLLVDTGGLWSGD 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC 257 I ++ + E V+L V E QA Y+ Sbjct: 64 KWEKKIQEKVDRALEDAEVVLFAVDGRAELTQADYEV 100 >gi|257088971|ref|ZP_05583332.1| Fe2+ transporter B [Enterococcus faecalis CH188] gi|312904827|ref|ZP_07763967.1| ferrous iron transport protein B [Enterococcus faecalis TX0635] gi|256997783|gb|EEU84303.1| Fe2+ transporter B [Enterococcus faecalis CH188] gi|310631833|gb|EFQ15116.1| ferrous iron transport protein B [Enterococcus faecalis TX0635] gi|315161042|gb|EFU05059.1| ferrous iron transport protein B [Enterococcus faecalis TX0645] gi|315576495|gb|EFU88686.1| ferrous iron transport protein B [Enterococcus faecalis TX0630] Length = 716 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 14/163 (8%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 I + G PN+GK+T +T A + ++P T+ G+ K+ K I+ D+PGI + Sbjct: 4 QIALAGNPNSGKTTTFNMLTGANQYVGNWPGVTVERKEGVAKKD-KTLIIQDLPGIYSLS 62 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + I R ++ V+L+I V+ LE N+ Q I L + Sbjct: 63 PYTPEEIVARDYLLEDQPSVILNILDVTNLERNLYLTTQLIETGLPV----------VCA 112 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 L+ +D ++ + +L+ G E S++ G+ L+ Sbjct: 113 LNMMDLLEKNGQTLNSEKLSYGLGVPVVEISALKNRGLDHALK 155 >gi|256957623|ref|ZP_05561794.1| Fe2+ transport system protein B [Enterococcus faecalis DS5] gi|256948119|gb|EEU64751.1| Fe2+ transport system protein B [Enterococcus faecalis DS5] gi|315035526|gb|EFT47458.1| ferrous iron transport protein B [Enterococcus faecalis TX0027] Length = 716 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 14/163 (8%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 I + G PN+GK+T +T A + ++P T+ G+ K+ K I+ D+PGI + Sbjct: 4 QIALAGNPNSGKTTTFNMLTGANQYVGNWPGVTVERKEGVAKKD-KTLIIQDLPGIYSLS 62 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + I R ++ V+L+I V+ LE N+ Q I L + Sbjct: 63 PYTPEEIVARDYLLEDQPSVILNILDVTNLERNLYLTTQLIETGLPV----------VCA 112 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 L+ +D ++ + +L+ G E S++ G+ L+ Sbjct: 113 LNMMDLLEKNGQTLNSEKLSYGLGVPVVEISALKNRGLDHALK 155 >gi|261820520|ref|YP_003258626.1| GTP-binding protein Era [Pectobacterium wasabiae WPP163] gi|261604533|gb|ACX87019.1| GTP-binding protein Era [Pectobacterium wasabiae WPP163] Length = 301 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 VAIVGRPNVGKSTLLNQLLGQKISITSRKPQTTRHRIMGIHTEGPYQAIYVDTPGL 66 >gi|255533659|ref|YP_003094031.1| small GTP-binding protein [Pedobacter heparinus DSM 2366] gi|255346643|gb|ACU05969.1| small GTP-binding protein [Pedobacter heparinus DSM 2366] Length = 433 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 20/166 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I I+G PN GKST +T ++ I D+ T + G+ + K+F + D G + N+ Sbjct: 5 IAIVGRPNVGKSTLFNRLTESRKAIVDDFSGVTRDRHYGVAEWTDKQFTVIDTGGYVANS 64 Query: 221 HQ--GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A I ++ + E VLL +V +V + DE++ +K + IV Sbjct: 65 EDVFEAAIREQVIIAIEEATVLLFMV-----DVTTGITDLDDEIAQLLRRSKKPVFIV-- 117 Query: 279 SQIDTVDSDTLARKKNELATQ----CGQVPFEFSSITGHGIPQILE 320 ++ VD+ L +N+ A G++ SS+TG G +L+ Sbjct: 118 --VNKVDNTQL---QNDAAVFYGFGLGEI-HPISSMTGSGTGDLLD 157 >gi|157814198|gb|ABV81844.1| putative GTP-binding protein [Lithobius forticatus] Length = 280 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H L H+ A ++ +V+ I D L Sbjct: 35 VVDIAGLVKGASEGQGLGNAFLSHISACDALFHLCRAFDDEEVIHVEGEVNPIRD-LEII 93 Query: 266 NSELRKK 272 N ELR K Sbjct: 94 NEELRLK 100 >gi|124265844|ref|YP_001019848.1| putative GTP-binding protein [Methylibium petroleiphilum PM1] gi|124258619|gb|ABM93613.1| putative GTP-binding protein [Methylibium petroleiphilum PM1] Length = 312 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 7/92 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI-IKN 219 + I+G PN GKST L ++ K I TT + GI +F+ D PG ++ Sbjct: 23 VAIVGRPNVGKSTLLNALVGQKVSITSRKAQTTRHRITGIRSADAAQFVFVDTPGFQTRH 82 Query: 220 AHQGAGIGDRFLKHTERT-----HVLLHIVSA 246 +GAG +R L T ++ V+L +V A Sbjct: 83 TVKGAGALNRNLNKTVQSVMGDVDVVLFVVEA 114 >gi|325266568|ref|ZP_08133245.1| GTP-binding protein HflX [Kingella denitrificans ATCC 33394] gi|324982011|gb|EGC17646.1| GTP-binding protein HflX [Kingella denitrificans ATCC 33394] Length = 380 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 6/88 (6%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTL---YPNLGIVKEGYKEFILADIPGIIKN 219 I+G NAGKST +T+A D F TL L + E IL D G ++N Sbjct: 216 AIVGYTNAGKSTLFNRLTKADVLAKDQLFATLDTTARKLYLAPE--HSIILTDTVGFVQN 273 Query: 220 -AHQGAGIGDRFLKHTERTHVLLHIVSA 246 H+ L+ T VLLH+V A Sbjct: 274 LPHKLVAAFSATLEETALADVLLHVVDA 301 >gi|256825342|ref|YP_003149302.1| small GTP-binding domain-containing protein [Kytococcus sedentarius DSM 20547] gi|256688735|gb|ACV06537.1| small GTP-binding protein domain/GTP-binding conserved hypothetical protein [Kytococcus sedentarius DSM 20547] Length = 527 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 38/179 (21%), Positives = 74/179 (41%), Gaps = 21/179 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKS+ L + ++ + D TT P ++ G + ++ D GI + Sbjct: 269 VALLGRPNVGKSSLLNRLAGSERVVVDNVAGTTRDPVDEYIELGGRTWMFVDTAGIRRRV 328 Query: 221 HQGAGI----GDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELRKKI 273 HQ G+ R E+ V + ++ A EE + Q ++D A Sbjct: 329 HQTRGVDFYASLRTQSALEKAEVAVVLIDAGEEIAEQDIRVVQQVIDSGRAL-------- 380 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPF----EFSSITGHGIPQILECLHDKIFS 328 ++ ++ DT D + + E+ QVP+ S+ G + +++ L + S Sbjct: 381 -VIAYNKWDTTDEERRHYLEREIERDLVQVPWAPRVNMSATRGRHVDKLVPALDQALES 438 >gi|259907722|ref|YP_002648078.1| GTP-binding protein EngA [Erwinia pyrifoliae Ep1/96] gi|224963344|emb|CAX54829.1| GTP-binding protein [Erwinia pyrifoliae Ep1/96] gi|283477576|emb|CAY73492.1| GTP-binding protein engA [Erwinia pyrifoliae DSM 12163] gi|310764770|gb|ADP09720.1| GTP-binding protein EngA [Erwinia sp. Ejp617] Length = 498 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 8/133 (6%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G + +EFI D GI Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60 Query: 217 IKNAH-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 N + ++ L E V+L +V A + A I L + R+K Sbjct: 61 DGNEEGVETRMAEQSLLAIEEADVVLFMVDA-RAGLMPADVAIAKHLRS-----RQKPTF 114 Query: 276 VGLSQIDTVDSDT 288 + ++ D +D+D+ Sbjct: 115 IVANKTDGLDADS 127 >gi|199582228|gb|ACH89785.1| putative GDP binding protein [Alpheus cf. bouvieri CRH-2008] gi|199582230|gb|ACH89786.1| putative GDP binding protein [Alpheus cf. bouvieri CRH-2008] gi|199582232|gb|ACH89787.1| putative GDP binding protein [Alpheus cf. bouvieri CRH-2008] gi|199582234|gb|ACH89788.1| putative GDP binding protein [Alpheus cf. bouvieri CRH-2008] gi|199582236|gb|ACH89789.1| putative GDP binding protein [Alpheus cf. bouvieri CRH-2008] gi|199582238|gb|ACH89790.1| putative GDP binding protein [Alpheus cf. bouvieri CRH-2008] gi|199582240|gb|ACH89791.1| putative GDP binding protein [Alpheus bouvieri] gi|199582242|gb|ACH89792.1| putative GDP binding protein [Alpheus bouvieri] gi|199582246|gb|ACH89794.1| putative GDP binding protein [Alpheus bouvieri] gi|199582248|gb|ACH89795.1| putative GDP binding protein [Alpheus bouvieri] gi|199582250|gb|ACH89796.1| putative GDP binding protein [Alpheus bouvieri] gi|199582252|gb|ACH89797.1| putative GDP binding protein [Alpheus bouvieri] gi|199582254|gb|ACH89798.1| putative GDP binding protein [Alpheus bouvieri] gi|199582256|gb|ACH89799.1| putative GDP binding protein [Alpheus bouvieri] gi|199582258|gb|ACH89800.1| putative GDP binding protein [Alpheus bouvieri] Length = 218 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + + H+ A E+ N + IL Sbjct: 3 VTDIAGLVKGASEGQGLGNAFLSHIKACDAIFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 62 Query: 260 DELSAYNSE--------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 DEL + E L K +E G ++ + DT+ R K+ L + V F Sbjct: 63 DELRLKDIEYINNVWDKLYKLVERGGDKKLKP-EYDTVCRVKSLLEEEKRHVRF 115 >gi|199582226|gb|ACH89784.1| putative GDP binding protein [Alpheus hebes] Length = 216 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCIL 259 + DI G++K A +G G+G+ FL H + + H+ A E+ N + IL Sbjct: 1 VTDIAGLVKGASEGQGLGNAFLSHIKACDAIFHMTRAFEDDDVTHVEGDVNPVRDLEIIL 60 Query: 260 DELSAYNSE--------LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 DEL + E L K +E G ++ + DT+ R K+ L + V F Sbjct: 61 DELRLKDIEYINNVWDKLYKLVERGGDKKLKP-EYDTVCRVKSLLEEEKRHVRF 113 >gi|73667900|ref|YP_303915.1| GTP-binding protein [Methanosarcina barkeri str. Fusaro] gi|72395062|gb|AAZ69335.1| GTP-binding protein HflX [Methanosarcina barkeri str. Fusaro] Length = 436 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 10/133 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 I + G NAGKST ++ + + FTTL P + G ++ +L D G I++ Sbjct: 208 ISLAGYTNAGKSTLFNAIVDESVEAKNMLFTTLVPMTRALDLGGRKALLTDTVGFIEDLP 267 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE----IV 276 H L + ++L +V A E+ + IL +LS + L +I+ I Sbjct: 268 HWLVDAFKSTLDEIFLSDLILLVVDASEKP-----ETILQKLSTSHDTLWDRIQGVPIIT 322 Query: 277 GLSQIDTVDSDTL 289 L++ D VD L Sbjct: 323 VLNKADLVDESKL 335 >gi|24372927|ref|NP_716969.1| GTP-binding protein Era [Shewanella oneidensis MR-1] gi|24347063|gb|AAN54414.1|AE015579_3 GTP-binding protein Era [Shewanella oneidensis MR-1] Length = 339 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + IIG PN GKST L + K I + P TT + +GI +G ++ + D PG+ Sbjct: 48 VAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIVFIDTPGL 103 >gi|307700914|ref|ZP_07637939.1| ribosome-associated GTPase EngA [Mobiluncus mulieris FB024-16] gi|307613909|gb|EFN93153.1| ribosome-associated GTPase EngA [Mobiluncus mulieris FB024-16] Length = 524 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKS+ L S+ + ++D P TT P +++ KE++ D GI + Sbjct: 266 VALVGRPNVGKSSLLNSLAGSGRSVVSDTPGTTRDPVDEVLELDGKEWVFVDTAGIKRRI 325 Query: 221 HQGAG 225 Q G Sbjct: 326 KQTVG 330 >gi|307300896|ref|ZP_07580665.1| GTP-binding protein Era [Sinorhizobium meliloti BL225C] gi|307320713|ref|ZP_07600125.1| GTP-binding protein Era [Sinorhizobium meliloti AK83] gi|306893640|gb|EFN24414.1| GTP-binding protein Era [Sinorhizobium meliloti AK83] gi|306903851|gb|EFN34437.1| GTP-binding protein Era [Sinorhizobium meliloti BL225C] Length = 309 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 23/175 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + +IG NAGKST + + AK I + T + GI G + + D PGI K Sbjct: 20 VALIGATNAGKSTLVNRLVGAKVSIVSHKVQTTRAIIRGIAIHGSAQIVFMDTPGIFKPR 79 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + DR + T + L+ ++ E ++ + IL+ L + +++ Sbjct: 80 RR----LDRAMVTTAWGGAKDADLIMLLIDSERGIKGDAEAILEGLKEVHQP-----KVL 130 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQV-----PFEFSSITGHGIPQILECLHDKI 326 L+++D V + L + LA V F S++TG G +++ L + + Sbjct: 131 VLNKVDQVRREDLLK----LAAAANDVVAFERTFMISALTGSGCEDVMDYLAETL 181 >gi|254776057|ref|ZP_05217573.1| hypothetical protein MaviaA2_15495 [Mycobacterium avium subsp. avium ATCC 25291] Length = 475 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 17/165 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + I I+G NAGKS+ L ++T A + D F TL P + + + F+L D G + Sbjct: 251 VPSIAIVGYTNAGKSSLLNALTGAGVLVQDALFATLEPTTRRAEWDDGRAFVLTDTVGFV 310 Query: 218 KNAHQGAGIGDRF---LKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAYNSELR 270 + H + + F L+ +L+H+V + N + A +Q I + ++ ++ + Sbjct: 311 R--HLPTQLVEAFRSTLEEVVDADLLVHVVDGSDVNPLAQIDAVHQVISEVIADHHGD-- 366 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 E++ +++ D LA+ ++ L G V F S+ TG GI Sbjct: 367 PPPELLVVNKTDAAGDVALAKLRHALP---GAV-F-VSAATGDGI 406 >gi|188533178|ref|YP_001906975.1| GTP-binding protein EngA [Erwinia tasmaniensis Et1/99] gi|238689730|sp|B2VE93|DER_ERWT9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|188028220|emb|CAO96078.1| GTP-binding protein [Erwinia tasmaniensis Et1/99] Length = 499 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 14/136 (10%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G + +EFI D GI Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60 Query: 217 IKNAHQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 N G+ R + + E V+L +V A + A I L + R+K Sbjct: 61 DGNEE---GVETRMAEQSLLAIEEADVVLFMVDA-RAGLMPADTAIAKHLRS-----RQK 111 Query: 273 IEIVGLSQIDTVDSDT 288 + ++ D +D+D+ Sbjct: 112 PTFLVANKTDGLDADS 127 >gi|126173440|ref|YP_001049589.1| GTP-binding protein Era [Shewanella baltica OS155] gi|160874398|ref|YP_001553714.1| GTP-binding protein Era [Shewanella baltica OS195] gi|125996645|gb|ABN60720.1| GTP-binding protein Era [Shewanella baltica OS155] gi|160859920|gb|ABX48454.1| GTP-binding protein Era [Shewanella baltica OS195] gi|315266633|gb|ADT93486.1| GTP-binding protein Era [Shewanella baltica OS678] Length = 338 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + IIG PN GKST + + K I + P TT + +GI +G K+ + D PG+ Sbjct: 47 VAIIGRPNVGKSTLINRLLGQKVSITSKKPQTTRHRIMGIHTDGPKQIVFIDTPGL 102 >gi|332530165|ref|ZP_08406113.1| GTP-binding protein Der [Hylemonella gracilis ATCC 19624] gi|332040357|gb|EGI76735.1| GTP-binding protein Der [Hylemonella gracilis ATCC 19624] Length = 444 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST +T+ + I ADY T + G ++G +EFI+ D G A Sbjct: 5 LALVGRPNVGKSTLFNRLTQTRDAIVADYAGLTRDRHYGNGRQGRREFIVIDTGGFEPTA 64 Query: 221 HQG 223 G Sbjct: 65 ETG 67 >gi|317472649|ref|ZP_07931964.1| GTP-binding protein HflX [Anaerostipes sp. 3_2_56FAA] gi|316899826|gb|EFV21825.1| GTP-binding protein HflX [Anaerostipes sp. 3_2_56FAA] Length = 412 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 6/103 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + I+G NAGKST L T A D F TL P V+ + ++ D G I+ Sbjct: 202 VCIVGYTNAGKSTLLNHFTDAGVLEEDQLFATLDPTTKSVELNSGQTVLMTDTVGFIRKL 261 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCI 258 H L+ + + ++LH+V +E+ ++A Y+ + Sbjct: 262 PHHLVDAFKSTLEEAKYSDIILHVVDCSNPFMEQQMEAVYETL 304 >gi|289434025|ref|YP_003463897.1| GTP-binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170269|emb|CBH26809.1| GTP-binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 418 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 9/112 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYP-------FTTLYPNL-GIVKEGYKEFILADI 213 + ++G NAGKST + + RA + AD F TL ++ IV K+F+L D Sbjct: 196 VSLVGYTNAGKSTTMNGLVRAYSETADKQVFEKDMLFATLETSVREIVLPDNKQFLLTDT 255 Query: 214 PGII-KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 G + K HQ L+ +L+H+V + + + Q + L A Sbjct: 256 VGFVSKLPHQLVKAFRSTLEEARDADLLIHVVDYSDPHYKTMMQTTEETLKA 307 >gi|262304221|gb|ACY44703.1| GTP-binding protein [Carcinoscorpius rotundicauda] Length = 281 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 7/75 (9%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + + H+ E+ +V+ I D ++ Sbjct: 35 VVDIAGLVKGASEGQGLGNAFLSHIKACDAIFHLCRTFEDKEVTHVEGDINPIRD-IAII 93 Query: 266 NSELRKKIE--IVGL 278 N ELR K E IVG+ Sbjct: 94 NEELRLKDEDYIVGI 108 >gi|260772369|ref|ZP_05881285.1| ferrous iron transport protein B [Vibrio metschnikovii CIP 69.14] gi|260611508|gb|EEX36711.1| ferrous iron transport protein B [Vibrio metschnikovii CIP 69.14] Length = 756 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 17/136 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I +G PN+GK+T +T AK ++ ++ T+ G +F + D+PGI + + Sbjct: 5 ILTVGNPNSGKTTLFNGLTGAKQQVGNWAGVTVEKKTGRYTHSGDQFYITDLPGIYALDS 64 Query: 220 AHQGAGIGDRFLKHTERTH---VLLHI--VSALEENVQAAYQ---------CILDELSAY 265 + I + TH V++++ V++LE ++ Q +L+++ A Sbjct: 65 GNDSNSIDESIASRAVLTHPADVIINVVDVTSLERSLYMTLQLRELGRPMVVVLNKMDAL 124 Query: 266 NSELRKKIEIVGLSQI 281 E R+ I++ L Q+ Sbjct: 125 KRE-RQTIDVKKLEQV 139 >gi|254839190|pdb|2WJH|A Chain A, Structure And Function Of The Feob G-Domain From Methanococcus Jannaschii gi|254839191|pdb|2WJH|B Chain B, Structure And Function Of The Feob G-Domain From Methanococcus Jannaschii Length = 166 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 +I +IG PN GKST ++T I ++P T+ G + ++F + D+PG+ Sbjct: 5 EIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEKFKVVDLPGVYSLT 64 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCI 258 A+ I R E+ ++++IV +ALE N+ Q + Sbjct: 65 ANSIDEIIARDYIINEKPDLVVNIVDATALERNLYLTLQLM 105 >gi|237785687|ref|YP_002906392.1| ferrous iron transport protein [Corynebacterium kroppenstedtii DSM 44385] gi|237758599|gb|ACR17849.1| ferrous iron transport protein [Corynebacterium kroppenstedtii DSM 44385] Length = 744 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 27/41 (65%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK 202 I ++G PNAGKST ++T AK K+ ++P TT+ + G K Sbjct: 54 IALVGAPNAGKSTLFNALTGAKAKMGNWPGTTVSVSRGAWK 94 >gi|225020601|ref|ZP_03709793.1| hypothetical protein CORMATOL_00608 [Corynebacterium matruchotii ATCC 33806] gi|224946547|gb|EEG27756.1| hypothetical protein CORMATOL_00608 [Corynebacterium matruchotii ATCC 33806] Length = 636 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPG 215 + ++G PNAGKST S+T AK ++ ++P TT+ + G K+ + + D PG Sbjct: 9 VALVGAPNAGKSTLFNSLTGAKARMGNWPGTTVEVSRGAWKQSKDVTYDVIDFPG 63 >gi|157364142|ref|YP_001470909.1| GTP-binding protein Era [Thermotoga lettingae TMO] gi|189037681|sp|A8F6R1|ERA_THELT RecName: Full=GTPase Era gi|157314746|gb|ABV33845.1| GTP-binding protein Era [Thermotoga lettingae TMO] Length = 296 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLAS-VTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PNAGKS+ + S + R +++ P TT I + Y + I D PGI K Sbjct: 6 VTLVGRPNAGKSSLINSFIGRKVLIVSEKPQTTRNKIRCIYTDSYHQIIFTDTPGIHKPV 65 Query: 221 HQ 222 H+ Sbjct: 66 HR 67 >gi|220932172|ref|YP_002509080.1| ferrous iron transport protein FeoB [Halothermothrix orenii H 168] gi|219993482|gb|ACL70085.1| ferrous iron transport protein FeoB [Halothermothrix orenii H 168] Length = 616 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 4/55 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 I ++G PN GKS F + T +++YP TTL + G YK++++ D PG+ Sbjct: 19 IVLVGNPNVGKSIFFNAFTGIYVSVSNYPGTTLDISTG----KYKDYVIIDTPGV 69 >gi|116492866|ref|YP_804601.1| GTPase [Pediococcus pentosaceus ATCC 25745] gi|122265670|sp|Q03F63|ERA_PEDPA RecName: Full=GTPase Era gi|116103016|gb|ABJ68159.1| GTPase [Pediococcus pentosaceus ATCC 25745] Length = 304 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 2/65 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKSTFL V K I ++ P TT GI ++ + D PGI K + Sbjct: 13 VAIVGRPNVGKSTFLNYVIGQKVAIMSNVPQTTRNKIQGIYTTDREQIVFIDTPGIHK-S 71 Query: 221 HQGAG 225 H G Sbjct: 72 HNKLG 76 >gi|152999779|ref|YP_001365460.1| GTP-binding protein Era [Shewanella baltica OS185] gi|151364397|gb|ABS07397.1| GTP-binding protein Era [Shewanella baltica OS185] Length = 338 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + IIG PN GKST + + K I + P TT + +GI +G K+ + D PG+ Sbjct: 47 VAIIGRPNVGKSTLINRLLGQKVSITSKKPQTTRHRIMGIHTDGPKQIVFIDTPGL 102 >gi|94501121|ref|ZP_01307644.1| predicted GTPase [Oceanobacter sp. RED65] gi|94426697|gb|EAT11682.1| predicted GTPase [Oceanobacter sp. RED65] Length = 482 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 10/138 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST +TR + +AD T G K G +++I+ D G I Sbjct: 5 IALVGRPNVGKSTLFNRLTRTRDALVADLAGLTRDRKFGAGKVGERDYIVVDTGG-ISGM 63 Query: 221 HQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 QG A + ++ + + ++L +V A + +A + I L A KK +V + Sbjct: 64 EQGLDAKMAEQSFQAMDEADIVLFLVDA-RAGLTSADKMIAQHLRA----TEKKTYVV-V 117 Query: 279 SQIDTVDSDTLARKKNEL 296 ++ID ++ D + EL Sbjct: 118 NKIDGLNPDVATSEFYEL 135 >gi|317049179|ref|YP_004116827.1| GTP-binding protein Era [Pantoea sp. At-9b] gi|316950796|gb|ADU70271.1| GTP-binding protein Era [Pantoea sp. At-9b] Length = 301 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 VAIVGRPNVGKSTLLNQLLGQKVSITSRKPQTTRHRIMGIHTEGPYQAIYVDTPGL 66 >gi|237732490|ref|ZP_04562971.1| GTP-binding protein EngA [Citrobacter sp. 30_2] gi|226908029|gb|EEH93947.1| GTP-binding protein EngA [Citrobacter sp. 30_2] Length = 504 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 13 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 72 Query: 215 GIIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 73 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSRQK 125 Query: 273 IEIVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 126 PTFLVANKTDGLDPD 140 >gi|161502327|ref|YP_001569439.1| GTP-binding protein EngA [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863674|gb|ABX20297.1| hypothetical protein SARI_00360 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 504 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 13 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTG 72 Query: 215 GI 216 GI Sbjct: 73 GI 74 >gi|313634288|gb|EFS00903.1| GTP-binding protein HflX [Listeria seeligeri FSL N1-067] Length = 418 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 9/112 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYP-------FTTLYPNL-GIVKEGYKEFILADI 213 + ++G NAGKST + + RA + AD F TL ++ IV K+F+L D Sbjct: 196 VSLVGYTNAGKSTTMNGLVRAYSETADKQVFEKDMLFATLETSVREIVLPDNKQFLLTDT 255 Query: 214 PGII-KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 G + K HQ L+ +L+H+V + + + Q + L A Sbjct: 256 VGFVSKLPHQLVKAFRSTLEEARDADLLIHVVDYSDPHYKTMMQTTEETLKA 307 >gi|312863532|ref|ZP_07723770.1| ferrous iron transport protein B [Streptococcus vestibularis F0396] gi|322517162|ref|ZP_08070045.1| ferrous iron transport protein B [Streptococcus vestibularis ATCC 49124] gi|311101068|gb|EFQ59273.1| ferrous iron transport protein B [Streptococcus vestibularis F0396] gi|322124221|gb|EFX95737.1| ferrous iron transport protein B [Streptococcus vestibularis ATCC 49124] Length = 712 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 6/104 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + +I +IG PN+GK++ +T ++ ++P T+ G+VK+ K+ + D+PGI Sbjct: 1 MTEIALIGNPNSGKTSLFNLITGNNQRVGNWPGVTVERKSGLVKKN-KDLEIQDLPGIYS 59 Query: 219 NAHQGA--GIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCI 258 + + +L ++R +L++V A LE N+ Q I Sbjct: 60 MSPYSPEEKVARDYL-LSQRADSILNVVDATNLERNLYLTTQLI 102 >gi|257080871|ref|ZP_05575232.1| ferrous iron transporter B [Enterococcus faecalis E1Sol] gi|256988901|gb|EEU76203.1| ferrous iron transporter B [Enterococcus faecalis E1Sol] Length = 716 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 14/163 (8%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 I + G PN+GK+T +T A + ++P T+ G+ K+ K I+ D+PGI + Sbjct: 4 QIALAGNPNSGKTTTFNMLTGANQYVGNWPGVTVERKEGVAKKD-KTLIIQDLPGIYSLS 62 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + I R ++ V+L+I V+ LE N+ Q I L + Sbjct: 63 PYTPEEIVARDYLLEDQPSVILNILDVTNLERNLYLTTQLIETGLPV----------VCA 112 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 L+ +D ++ + +L+ G E S++ G+ L+ Sbjct: 113 LNMMDLLEKNGQTLNSEKLSYGLGVPVVEISALKNRGLDHALK 155 >gi|258516219|ref|YP_003192441.1| GTP-binding protein Era [Desulfotomaculum acetoxidans DSM 771] gi|257779924|gb|ACV63818.1| GTP-binding protein Era [Desulfotomaculum acetoxidans DSM 771] Length = 300 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + R ++D P TT + ++ + I D PGI K Sbjct: 12 VAIIGRPNVGKSTLMNRMIGRKIAIMSDKPQTTRHKIYCVLTRDNYQVIFLDTPGIHKPK 71 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSA 246 H+ G + D L ++L +V A Sbjct: 72 HKLGQHLVDTSLSTFGEVDLILFLVEA 98 >gi|227553841|ref|ZP_03983890.1| ferrous iron transport protein B [Enterococcus faecalis HH22] gi|227177094|gb|EEI58066.1| ferrous iron transport protein B [Enterococcus faecalis HH22] Length = 716 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 14/163 (8%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 I + G PN+GK+T +T A + ++P T+ G+ K+ K I+ D+PGI + Sbjct: 4 QIALAGNPNSGKTTTFNMLTGANQYVGNWPGVTVERKEGVAKKD-KTLIIQDLPGIYSLS 62 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + I R ++ V+L+I V+ LE N+ Q I L + Sbjct: 63 PYTPEEIVARDYLLEDQPSVILNILDVTNLERNLYLTTQLIETGLPV----------VCA 112 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 L+ +D ++ + +L+ G E S++ G+ L+ Sbjct: 113 LNMMDLLEKNGQTLNSEKLSYGLGVPVVEISALKNRGLDHALK 155 >gi|113971182|ref|YP_734975.1| GTP-binding protein Era [Shewanella sp. MR-4] gi|114048420|ref|YP_738970.1| GTP-binding protein Era [Shewanella sp. MR-7] gi|117921464|ref|YP_870656.1| GTP-binding protein Era [Shewanella sp. ANA-3] gi|113885866|gb|ABI39918.1| GTP-binding protein Era [Shewanella sp. MR-4] gi|113889862|gb|ABI43913.1| GTP-binding protein Era [Shewanella sp. MR-7] gi|117613796|gb|ABK49250.1| GTP-binding protein Era [Shewanella sp. ANA-3] Length = 339 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + IIG PN GKST L + K I + P TT + +GI +G ++ + D PG+ Sbjct: 48 VAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIVFIDTPGL 103 >gi|229820636|ref|YP_002882162.1| small GTP-binding protein [Beutenbergia cavernae DSM 12333] gi|229566549|gb|ACQ80400.1| small GTP-binding protein [Beutenbergia cavernae DSM 12333] Length = 495 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKS+ L S+T + + D TT P +++ G + ++ D GI + Sbjct: 236 VALVGKPNVGKSSLLNSLTGSERVVVDDVAGTTRDPVDELIELGGRPWVFVDTAGIRRRV 295 Query: 221 HQGAG 225 HQ G Sbjct: 296 HQAQG 300 >gi|148978248|ref|ZP_01814766.1| Fe2+ transport system protein B [Vibrionales bacterium SWAT-3] gi|145962549|gb|EDK27826.1| Fe2+ transport system protein B [Vibrionales bacterium SWAT-3] Length = 757 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 7/99 (7%) Query: 165 IGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAHQ 222 +G PN+GK+T ++T AK + ++ T+ G+ +F L D+PGI + + + Sbjct: 8 VGNPNSGKTTLFNALTGAKQHVGNWVGVTVEKKTGVYSHAGDQFQLTDLPGIYALDSGND 67 Query: 223 GAGIGDRFLKHTERTH---VLLHIV--SALEENVQAAYQ 256 I + TH V++++V S LE ++ Q Sbjct: 68 ANSIDESIASRAVLTHPADVIINVVDASCLERSLYMTLQ 106 >gi|313638957|gb|EFS03979.1| GTP-binding protein HflX [Listeria seeligeri FSL S4-171] Length = 418 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 9/112 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYP-------FTTLYPNL-GIVKEGYKEFILADI 213 + ++G NAGKST + + RA + AD F TL ++ IV K+F+L D Sbjct: 196 VSLVGYTNAGKSTTMNGLVRAYSETADKQVFEKDMLFATLETSVREIVLPDNKQFLLTDT 255 Query: 214 PGII-KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSA 264 G + K HQ L+ +L+H+V + + + Q + L A Sbjct: 256 VGFVSKLPHQLVKAFRSTLEEARDADLLIHVVDYSDPHYKTMMQTTEETLKA 307 >gi|301058126|ref|ZP_07199178.1| GTP-binding protein Era [delta proteobacterium NaphS2] gi|300447758|gb|EFK11471.1| GTP-binding protein Era [delta proteobacterium NaphS2] Length = 294 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 17/172 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI--IK 218 IGI+G PN GKST L + K I + P TT LG+ + + + D PGI + Sbjct: 8 IGIVGPPNVGKSTLLNRIMGTKLAIVSPKPQTTRNRILGVFHQHDCQMVFMDTPGIHRTR 67 Query: 219 NAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 A + + F E +L+ + + EN A I+ L + K + + Sbjct: 68 TALHKSMVDAAFAAFHEVDMILMMVEADPREN--PAVPSIIRGLKSI-----AKPRFLAI 120 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHDKI 326 ++ID V + + LA ++ F+ S++ G+G+ +L+ L ++ Sbjct: 121 NKIDRVKKEHIL---PLLADYGRKLDFDAIIPISALKGNGVDTLLQELKRRL 169 >gi|282897000|ref|ZP_06305002.1| Small GTP-binding protein, era -like protein [Raphidiopsis brookii D9] gi|281197652|gb|EFA72546.1| Small GTP-binding protein, era -like protein [Raphidiopsis brookii D9] Length = 308 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 20/174 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 IGIIG PN GKST + + K I T L GI+ + I D PGI K Sbjct: 19 IGIIGRPNVGKSTLMNQLIGQKIAITSPVAQTTRNRLRGILTREKAQLIFVDTPGIHKPH 78 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC------ILDELSAYNSELRKKIE 274 H +G+ +++ + + +V + V C I D LS + Sbjct: 79 H---PLGEVLVQNAKIAITSVDVVLFV---VDGTAVCGGGDRFIADLLSKCEIPV----- 127 Query: 275 IVGLSQID--TVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I+G+++ID V+++ + ELA + +FS++ GI ++ + L +++ Sbjct: 128 IMGINKIDQQPVETEKIDESYRELARENQWQIVKFSALENQGILELEDLLIEQL 181 >gi|251788699|ref|YP_003003420.1| GTP-binding protein Era [Dickeya zeae Ech1591] gi|247537320|gb|ACT05941.1| GTP-binding protein Era [Dickeya zeae Ech1591] Length = 301 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 VAIVGRPNVGKSTLLNQLLGQKISITSRKPQTTRHRIMGIHTEGPYQAIYVDTPGL 66 >gi|225464244|ref|XP_002267566.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297744311|emb|CBI37281.3| unnamed protein product [Vitis vinifera] Length = 596 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 18/135 (13%) Query: 146 LGQEKIIWL--------KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN 197 LG E +I L ++K +GIIGLPN GKS+ + S+ R+ + + T P Sbjct: 246 LGAETLIKLLKNYSRSHEIKTSITVGIIGLPNVGKSSLINSLKRS--HVVNVGAT---PG 300 Query: 198 LGIVKEGY---KEFILADIPGII--KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ 252 L ++ K IL D PG++ K+ I R K E+ +++ V + + Sbjct: 301 LTRSRQEVHLDKNVILLDCPGVVMLKSGSNDTSIALRNCKRIEKLDDVINPVKEILKLCP 360 Query: 253 AAYQCILDELSAYNS 267 A L ++S++ S Sbjct: 361 AELLVTLYKISSFES 375 >gi|126731325|ref|ZP_01747132.1| GTP-binding protein HflX [Sagittula stellata E-37] gi|126708236|gb|EBA07295.1| GTP-binding protein HflX [Sagittula stellata E-37] Length = 396 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 11/170 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNA 220 + ++G NAGKST +T A+ D F TL P + V+ + IL+D G I + Sbjct: 178 VALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRAVRLPTGADVILSDTVGFISDL 237 Query: 221 HQGAGIGDR-FLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 R L+ V++H+ +S E + QA + ILD L E +IE+ Sbjct: 238 PTELVAAFRATLEEVLAADVIVHVRDISHPETDAQAEDVRTILDGLGV--DEGTPQIEL- 294 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 ++ID + D + G F S++TG G+ L+ + + + Sbjct: 295 -WNKIDRLSGDVKVATEARADRDAG--IFAVSAVTGEGLDGFLDAVTEAL 341 >gi|326387750|ref|ZP_08209356.1| small GTP-binding protein domain-containing protein [Novosphingobium nitrogenifigens DSM 19370] gi|326207796|gb|EGD58607.1| small GTP-binding protein domain-containing protein [Novosphingobium nitrogenifigens DSM 19370] Length = 448 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 10/169 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKN- 219 I ++G NAGKST +T A D F TL P + ++ G + IL+D G I + Sbjct: 218 IALVGYTNAGKSTLFNRLTGATVMAEDLLFATLDPTMRAIRLPGVDKAILSDTVGFISDL 277 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC-----ILDELSAYNSELRKKIE 274 Q L+ V++H+ N +A Q IL +L E Sbjct: 278 PTQLVAAFRATLEEVTAADVIVHVRDV--ANPASAQQKREVEDILTDLGVIGEEGTSIPI 335 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVP-FEFSSITGHGIPQILECL 322 + ++ID + D A +++ + P S+ TG G+ ++E L Sbjct: 336 VEAWNKIDLLAPDERALREDLITHGVPDRPVVPISAATGEGVDALVERL 384 >gi|315288063|gb|EFU47463.1| ribosome-associated GTPase EngA [Escherichia coli MS 110-3] gi|324008519|gb|EGB77738.1| ribosome-associated GTPase EngA [Escherichia coli MS 57-2] Length = 499 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 13/168 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 67 Query: 215 GIIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 68 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPA------DEAIAKHLRSREK 120 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + ++ D +D D + A G++ + ++ G G+ +LE Sbjct: 121 PTFLVANKTDGLDPDQAV--VDFYALGLGEI-YPIAASHGRGVLSLLE 165 >gi|303236850|ref|ZP_07323429.1| GTP-binding protein Era [Prevotella disiens FB035-09AN] gi|302483018|gb|EFL46034.1| GTP-binding protein Era [Prevotella disiens FB035-09AN] Length = 293 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 21/137 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + + K IA + TT + +GIV + + +D PG++K Sbjct: 7 VNIVGNPNVGKSTLMNQLVGEKISIATFKAQTTRHRIMGIVNTEDMQIVFSDTPGVLKPN 66 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV-SALEENVQAAYQCILDELSAYNSELRKKIE----- 274 ++ ++LH SAL + Y + E NSE +K+ Sbjct: 67 YKMQ-------------EMMLHFSESALADADILLYVTDVIEKPEKNSEFLEKVAKMDIP 113 Query: 275 -IVGLSQIDTVDSDTLA 290 I+ +++ID D T+ Sbjct: 114 VILLINKIDESDQKTVV 130 >gi|239909250|ref|YP_002955992.1| GTP-binding protein Era homolog [Desulfovibrio magneticus RS-1] gi|239799117|dbj|BAH78106.1| GTP-binding protein Era homolog [Desulfovibrio magneticus RS-1] Length = 305 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 28/181 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G NAGKST L + K I + P TT GI+ +G + + D PG+ + Sbjct: 10 VVMLGPTNAGKSTLLNRLIGQKISIVSPKPQTTRNSISGIITQGDLQAVFLDTPGLHR-- 67 Query: 221 HQGAGIGDRFLKHTE----RTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 Q GI L+ + V+L I+ A A Y LD L+ +LR ++ V Sbjct: 68 -QKRGIAPLLLRSAYAALGQADVVLLILDA------AQYARRLDGLA---PDLRPIVKAV 117 Query: 277 G---LSQIDTVDSDTLARKKNELATQCGQVP--------FEFSSITGHGIPQILECLHDK 325 G L + ++ + R+K L V F S++TG G+ +L L + Sbjct: 118 GDGRLPVLIALNKADVVREKARLLPVLAAVSEALPAAELFPISALTGLGVDDLLTALMSR 177 Query: 326 I 326 + Sbjct: 178 L 178 >gi|260495459|ref|ZP_05815585.1| GTP-binding protein Era [Fusobacterium sp. 3_1_33] gi|260196996|gb|EEW94517.1| GTP-binding protein Era [Fusobacterium sp. 3_1_33] Length = 298 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 8/165 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST + + K I T N+ GI+ ++I D PGI K Sbjct: 6 IAVVGRPNVGKSTLINKLVSEKVAIVSDKAGTTRDNIKGILNFKDNQYIFIDTPGIHKPQ 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H G + + + + ++L ++ A + + ++D + N +KK +I+ ++ Sbjct: 66 HLLGEYMTNIAVSILKDVDIILFLIDA-SKPIGTGDMFVMDRI---NENAKKKPKILLVN 121 Query: 280 QIDTVDSDTLARKKNELATQCGQV-PFEFSS-ITGHGIPQILECL 322 ++D + + K E+ + G+ F+S + GI Q+LE L Sbjct: 122 KVDLISDEQKKEKLKEIEEKLGKFDKIIFASGMYSFGISQLLESL 166 >gi|209695942|ref|YP_002263872.1| GTP-binding protein Era [Aliivibrio salmonicida LFI1238] gi|208009895|emb|CAQ80208.1| GTP-binding protein era [Aliivibrio salmonicida LFI1238] Length = 321 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +G+ EG + I D PG+ Sbjct: 30 IAIVGRPNVGKSTLLNQILGQKISITSRKPQTTRHRIMGVDTEGDYQAIYIDTPGL 85 >gi|308805002|ref|XP_003079813.1| putative nucleostemin (ISS) [Ostreococcus tauri] gi|116058270|emb|CAL53459.1| putative nucleostemin (ISS) [Ostreococcus tauri] Length = 492 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 22/137 (16%) Query: 120 GGNGGFGNAHFKSSTN---QAPYYANPGILGQEKIIWLKLKLIADIGIIGLPNAGKSTFL 176 G G NA+FKSS N A YA +K +GI+G PN GKS+ + Sbjct: 169 GNKLGARNANFKSSGNALGDAEDYARNK----------NMKTAITVGIVGFPNVGKSSLI 218 Query: 177 ASVTRAKPKIA--DYPFTTLYPNLGIVKEGY--KEFILADIPGIIKNAHQGAGIGDRFLK 232 S+ R++ A + P T ++KE K L D PG++ + G G L+ Sbjct: 219 NSLKRSRTAAAVGNTPGMT-----KVLKEIKLDKNVKLIDSPGVVFASELGESAGAAALR 273 Query: 233 HTERTHVLLHIVSALEE 249 + + + ++ + E Sbjct: 274 NCVKVERIEDPIAPVHE 290 >gi|94266229|ref|ZP_01289937.1| GTP-binding protein, HSR1-related [delta proteobacterium MLMS-1] gi|93453202|gb|EAT03663.1| GTP-binding protein, HSR1-related [delta proteobacterium MLMS-1] Length = 176 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 10/108 (9%) Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPG 215 K + + ++G NAGKST L S+T ++ D F TL P ++ + E I+ D G Sbjct: 6 KEVPVLSLVGYTNAGKSTLLNSLTGSEIMAEDQLFATLDPTSRRLRFPEELEVIITDTVG 65 Query: 216 IIKNAHQGAGIGDRF---LKHTERTHVLLHIVSA----LEENVQAAYQ 256 I+ H A + F L+ + VL+H+V A EE+++ Q Sbjct: 66 FIR--HLPAELLQAFKATLEELDEADVLIHVVDAANPRWEEHIRVVEQ 111 >gi|301056316|ref|YP_003794527.1| ferrous iron transport protein B [Bacillus anthracis CI] gi|300378485|gb|ADK07389.1| ferrous iron transport protein B [Bacillus cereus biovar anthracis str. CI] Length = 662 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 17/167 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 + ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 4 VALLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--KQGTLIDLPGVYDLNP 61 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + G+ FL E H +L+IV S E N+ Q + E K + I G Sbjct: 62 VSRDEGVVTNFLLTEEFQH-MLNIVDSSQFERNMHLTLQLL---------EFGKPVSI-G 110 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 L+ +D + L+ G + +G G ++L L + Sbjct: 111 LNMVDVAKQRGIVIDVKRLSELLGVTVVPVVARSGKGCEELLATLKE 157 >gi|325981701|ref|YP_004294103.1| GTP-binding protein Era [Nitrosomonas sp. AL212] gi|325531220|gb|ADZ25941.1| GTP-binding protein Era [Nitrosomonas sp. AL212] Length = 297 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 7/91 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST L + + K I TT + GI+ + +F+ D PG Sbjct: 12 VAIIGRPNVGKSTLLNKLVKQKISITSKKAQTTRFRINGILTDEQTQFVFVDTPGF--QT 69 Query: 221 HQGAGIG---DRFLKHTER-THVLLHIVSAL 247 H + + +R + + R +V+L ++ A+ Sbjct: 70 HYASVLNTAMNRVVTQSMREVNVILFVIEAM 100 >gi|297194461|ref|ZP_06911859.1| GTP-binding protein Era [Streptomyces pristinaespiralis ATCC 25486] gi|197718729|gb|EDY62637.1| GTP-binding protein Era [Streptomyces pristinaespiralis ATCC 25486] Length = 321 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 11/132 (8%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I + P TT + GIV + IL D PG+ K Sbjct: 28 VGRPNAGKSTLTNALVGQKVAITSTRPQTTRHTVRGIVHRPEAQLILVDTPGLHKPR--- 84 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ ++ + + I EL+ ++K ++ +++ Sbjct: 85 TLLGERLNDIVRTTWAEVDVIGFCLPADQKLGPGDRFIAKELAG----IKKTPKVAIITK 140 Query: 281 IDTVDSDTLARK 292 D VDS TLA + Sbjct: 141 TDLVDSKTLAEQ 152 >gi|157814214|gb|ABV81852.1| putative GTP-binding protein [Speleonectes tulumensis] Length = 280 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL + + H+ A +++ V+ + D L Sbjct: 35 VVDIAGLVKGASEGQGLGNAFLSNISACDAIFHLCRAFDDDDVTHVEGEVNPVRD-LDII 93 Query: 266 NSELRKKIEIVGLSQIDTVDSDTL 289 + ELR K E L+Q+D + L Sbjct: 94 SEELRLKDEEYLLAQLDKMQRTVL 117 >gi|149479196|ref|XP_001517412.1| PREDICTED: similar to ERA-W [Ornithorhynchus anatinus] Length = 354 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 I + ++G PNAGKST + R ++ TT LG++ E + IL D PG I Sbjct: 35 ILRVAVLGAPNAGKSTLANQLLGRKVFPVSKKVHTTRCQALGVITEDETQVILLDTPGFI 94 Query: 218 KNAHQ 222 A Q Sbjct: 95 SPAKQ 99 >gi|89901079|ref|YP_523550.1| small GTP-binding protein domain-containing protein [Rhodoferax ferrireducens T118] gi|89345816|gb|ABD70019.1| Small GTP-binding protein domain [Rhodoferax ferrireducens T118] Length = 382 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 15/133 (11%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEGYKEFILADIPGIIK 218 +I ++G NAGKST ++ +A+ AD F TL + E + L+D G I+ Sbjct: 203 NISLVGYTNAGKSTLFNALVKARTYTADQLFATLDTTTRQLYLGEAGRSISLSDTVGFIR 262 Query: 219 NAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKK 272 + G+ D F L+ +LLH+V A A Q +L E+ A + Sbjct: 263 DLPH--GLIDAFQATLQEAVDADLLLHVVDAASPQFLEQIAEVQRVLGEIGAADIP---- 316 Query: 273 IEIVGLSQIDTVD 285 +I+ +++D +D Sbjct: 317 -QILVFNKLDVID 328 >gi|261854735|ref|YP_003262018.1| ferrous iron transporter B [Halothiobacillus neapolitanus c2] gi|261835204|gb|ACX94971.1| ferrous iron transport protein B [Halothiobacillus neapolitanus c2] Length = 778 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 30/54 (55%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 +G+IG PN GK+T ++T + K+ ++P T+ +G G L D+PG Sbjct: 6 VGLIGNPNCGKTTLFNALTGLRQKVGNWPGVTVDRKVGTFDVGADRVELVDLPG 59 >gi|254507481|ref|ZP_05119615.1| GTP-binding protein Era [Vibrio parahaemolyticus 16] gi|219549551|gb|EED26542.1| GTP-binding protein Era [Vibrio parahaemolyticus 16] Length = 325 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +G+ EG + I D PG+ Sbjct: 34 VAIVGRPNVGKSTLLNRILGQKISITSRKPQTTRHRIMGVDTEGDYQAIYVDTPGL 89 >gi|149926261|ref|ZP_01914523.1| GTP-binding protein HflX [Limnobacter sp. MED105] gi|149825079|gb|EDM84291.1| GTP-binding protein HflX [Limnobacter sp. MED105] Length = 373 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 14/166 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK-EFILADIPGIIKN- 219 + I+G NAGKST ++ K AD F TL V K + L+D G I++ Sbjct: 193 VAIVGYTNAGKSTLFNAIASDKAYAADQLFATLDTTTRRVWLAPKVDMALSDTVGFIRDL 252 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRK--KIEIVG 277 +H L+ VLLH+V +DE++ E+ +++ Sbjct: 253 SHSLVDAFKATLESAVHADVLLHVVDV----SSPVRHSQIDEVNKVLLEIEAGDVPQVII 308 Query: 278 LSQIDTVDSDTLARKKNELATQCGQV-PFEFSSITGHGIPQILECL 322 ++ID + + + G++ S+ G GIP++ ECL Sbjct: 309 WNKIDACERSVEVERNGD-----GKILSVAVSARYGLGIPELRECL 349 >gi|242240202|ref|YP_002988383.1| GTP-binding protein Era [Dickeya dadantii Ech703] gi|242132259|gb|ACS86561.1| GTP-binding protein Era [Dickeya dadantii Ech703] Length = 301 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 VAIVGRPNVGKSTLLNQLLGQKISITSRKPQTTRHRIMGIHTEGPYQAIYVDTPGL 66 >gi|85373794|ref|YP_457856.1| GTP-binding protein Era [Erythrobacter litoralis HTCC2594] gi|122544698|sp|Q2NB82|ERA_ERYLH RecName: Full=GTPase Era gi|84786877|gb|ABC63059.1| GTPase [Erythrobacter litoralis HTCC2594] Length = 304 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 33/178 (18%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIV----KEGYKEFILADIPGI 216 + ++G PNAGKST + + K I TT LGI + + IL D PGI Sbjct: 11 VAVLGAPNAGKSTLVNQLVGQKVAITSAKAQTTRARMLGIALHESDDAKTQMILVDTPGI 70 Query: 217 IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL--DELSAYNSEL----- 269 R + +VSA E ++A +L D + EL Sbjct: 71 F----------------APRRRLDRAMVSAAWEGAESADAVLLLVDPVKQRRHELEPLLE 114 Query: 270 ----RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEF-SSITGHGIPQILECL 322 R + +I+ L+++D + L +L+ + F S++TG G+P++ L Sbjct: 115 SLKDRPERKILVLNKVDVAKKEPLLALAQDLSQKVDFAEIYFVSALTGDGVPEMKNAL 172 >gi|54023403|ref|YP_117645.1| GTP-binding protein Era [Nocardia farcinica IFM 10152] gi|54014911|dbj|BAD56281.1| putative GTP-binding protein [Nocardia farcinica IFM 10152] Length = 305 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + +G PN GKST ++ AK I + P TT + GIV + + IL D PG+ Sbjct: 15 VCFVGRPNTGKSTLTNALVGAKIAITSSRPQTTRHTIRGIVHREHAQLILVDTPGL 70 >gi|227875339|ref|ZP_03993481.1| GTP-binding protein EngA [Mobiluncus mulieris ATCC 35243] gi|227844244|gb|EEJ54411.1| GTP-binding protein EngA [Mobiluncus mulieris ATCC 35243] Length = 517 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKS+ L S+ + ++D P TT P +++ KE++ D GI + Sbjct: 259 VALVGRPNVGKSSLLNSLAGSGRSVVSDTPGTTRDPVDEVLELDGKEWVFVDTAGIKRRI 318 Query: 221 HQGAG 225 Q G Sbjct: 319 KQTVG 323 >gi|86159712|ref|YP_466497.1| ferrous iron transport protein B [Anaeromyxobacter dehalogenans 2CP-C] gi|85776223|gb|ABC83060.1| ferrous iron transport protein B [Anaeromyxobacter dehalogenans 2CP-C] Length = 741 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 13/131 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 I I G PN+GKST + + ++ ++ ++P T+ + G + L D+PG + Sbjct: 23 IAIAGNPNSGKSTLVNGLAGSRLQVGNWPGVTVERKEASFEHGGRRIRLVDLPGTYSLSP 82 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQC------ILDELSAYNSELRK 271 Q + +L ER V++++V A LE N+ Q ++ L+ Y+ L K Sbjct: 83 WSQEERVARDYLVE-ERPDVVVNVVDATNLERNLYLTVQLLELGLPVVMALNIYDEALAK 141 Query: 272 --KIEIVGLSQ 280 +I++ GL + Sbjct: 142 GLRIDVRGLEE 152 >gi|15964826|ref|NP_385179.1| GTP-binding protein Era [Sinorhizobium meliloti 1021] gi|21263594|sp|Q92R46|ERA_RHIME RecName: Full=GTPase Era gi|15074005|emb|CAC45652.1| Probable GTP-binding protein [Sinorhizobium meliloti 1021] Length = 313 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 23/175 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + +IG NAGKST + + AK I + T + GI G + + D PGI K Sbjct: 24 VALIGATNAGKSTLVNRLVGAKVSIVSHKVQTTRAIIRGIAIHGSAQIVFMDTPGIFKPR 83 Query: 221 HQGAGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + DR + T + L+ ++ E ++ + IL+ L + +++ Sbjct: 84 RR----LDRAMVTTAWGGAKDADLIMLLIDSERGIKGDAEAILEGLKEVHQP-----KVL 134 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQV-----PFEFSSITGHGIPQILECLHDKI 326 L+++D V + L + LA V F S++TG G +++ L + + Sbjct: 135 VLNKVDQVRREDLLK----LAAAANDVVAFERTFMISALTGSGCEDVMDYLAETL 185 >gi|254839194|pdb|2WJJ|A Chain A, Structure And Function Of The Feob G-Domain From Methanococcus Jannaschii gi|254839195|pdb|2WJJ|B Chain B, Structure And Function Of The Feob G-Domain From Methanococcus Jannaschii Length = 168 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 3/100 (3%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-N 219 +I +IG PN GKST ++T I ++P T+ G + ++F + D+PG+ Sbjct: 6 EIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEKFKVVDLPGVYSLT 65 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQC 257 A+ I R E+ ++++IV +ALE N+ Q Sbjct: 66 ANSIDEIIARDYIINEKPDLVVNIVDATALERNLYLTLQL 105 >gi|224532340|ref|ZP_03672972.1| GTP-binding protein [Borrelia valaisiana VS116] gi|224511805|gb|EEF82211.1| GTP-binding protein [Borrelia valaisiana VS116] Length = 279 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 19/142 (13%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG+PN GKS+ + ++ R K+A+ P T N+ IVK +E L D+PGI+ + Sbjct: 120 VLIIGVPNVGKSSIINLLSGRKSAKVANKPGYT--KNIQIVKIN-EEINLFDMPGILWHN 176 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE--LRKKIEIVGL 278 I + +L I + + +N+ A + E+ N++ L KK EI Sbjct: 177 LADQSIAKKL-------AILDMIKNEILDNIDLALYLL--EIMDQNNKNILLKKYEICHK 227 Query: 279 SQIDTVDSDTLAR----KKNEL 296 + +D + + AR KKNEL Sbjct: 228 NSLDILQNFAKARKLIDKKNEL 249 >gi|254411028|ref|ZP_05024806.1| GTP-binding protein Era [Microcoleus chthonoplastes PCC 7420] gi|196182383|gb|EDX77369.1| GTP-binding protein Era [Microcoleus chthonoplastes PCC 7420] Length = 318 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 +GIIG PN GKST + + K I T L GI+ + I D PGI K Sbjct: 30 VGIIGRPNVGKSTLMNELVGQKIAITSPVAQTTRNRLQGILTTDNAQLIFVDTPGIHKPH 89 Query: 221 HQ 222 HQ Sbjct: 90 HQ 91 >gi|218778529|ref|YP_002429847.1| GTP-binding proten HflX [Desulfatibacillum alkenivorans AK-01] gi|218759913|gb|ACL02379.1| GTP-binding proten HflX [Desulfatibacillum alkenivorans AK-01] Length = 544 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 13/125 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + I+G NAGKST L ++T+A+ F TL P ++ KE I+ D G I++ Sbjct: 380 VSIVGYTNAGKSTLLNTLTQAEVLAESKLFATLDPTSRRLRFPEDKEIIITDTVGFIRDL 439 Query: 221 HQGAGIG-DRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + L+ + +LLH++ A N + A Q + K +E +G+S Sbjct: 440 PKDLVTAFAATLEELKSADLLLHVIDA--SNPRMAEQV---------ESVDKILEDIGVS 488 Query: 280 QIDTV 284 I T+ Sbjct: 489 AIPTI 493 >gi|115378413|ref|ZP_01465575.1| GTP-binding protein [Stigmatella aurantiaca DW4/3-1] gi|310819383|ref|YP_003951741.1| GTP-binding protein HflX [Stigmatella aurantiaca DW4/3-1] gi|115364603|gb|EAU63676.1| GTP-binding protein [Stigmatella aurantiaca DW4/3-1] gi|309392455|gb|ADO69914.1| GTP-binding protein HflX [Stigmatella aurantiaca DW4/3-1] Length = 567 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 I I+G NAGKST L ++T A + F TL P ++ +E I+ D G I++ Sbjct: 397 ISIVGYTNAGKSTLLNAITNADVLAENKLFATLDPTSRRLRFPQEREVIITDTVGFIRDL 456 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSA 246 + R L+ +LLH+V A Sbjct: 457 PKDLVAAFRATLEELYDASLLLHVVDA 483 >gi|228478249|ref|ZP_04062857.1| ferrous iron transport protein B [Streptococcus salivarius SK126] gi|228249928|gb|EEK09198.1| ferrous iron transport protein B [Streptococcus salivarius SK126] Length = 712 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 6/104 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + +I +IG PN+GK++ +T ++ ++P T+ G+VK+ K+ + D+PGI Sbjct: 1 MTEIALIGNPNSGKTSLFNLITGNNQRVGNWPGVTVERKSGLVKKN-KDLEIQDLPGIYS 59 Query: 219 NAHQGA--GIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCI 258 + + +L ++R +L++V A LE N+ Q I Sbjct: 60 MSPYSPEEKVARDYL-LSQRADSILNVVDATNLERNLYLTTQLI 102 >gi|213962424|ref|ZP_03390687.1| GTP-binding protein HflX [Capnocytophaga sputigena Capno] gi|213955090|gb|EEB66409.1| GTP-binding protein HflX [Capnocytophaga sputigena Capno] Length = 401 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 13/152 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + + +IG N GKST + +++++ + F TL + V F+L+D G I+ Sbjct: 199 LVRVALIGYTNVGKSTLMNVISKSEVFAENKLFATLDTTVRKVVIENLPFLLSDTVGFIR 258 Query: 219 N-AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSAYNSELRKKI 273 Q L +LLH+V EE++Q+ Q + + SA K Sbjct: 259 KLPTQLIESFKSTLDEVREADLLLHVVDISHPNFEEHIQSVNQILAEIHSA------DKP 312 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPF 305 I+ ++ID ++ +A +++LATQ + F Sbjct: 313 TIMVFNKIDAYTNEEIA--EDDLATQRTKKHF 342 >gi|323701163|ref|ZP_08112838.1| small GTP-binding protein [Desulfotomaculum nigrificans DSM 574] gi|323533765|gb|EGB23629.1| small GTP-binding protein [Desulfotomaculum nigrificans DSM 574] Length = 188 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 3/95 (3%) Query: 154 LKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADI 213 L+L + + ++G PN GKS +T A +++YP TT+ + G K G + F + D Sbjct: 19 LELHGLKKVVLVGNPNVGKSVLFNRLTGAYVTVSNYPGTTVEVSRGKGKIGDEYFEVVDT 78 Query: 214 PGI--IKNAHQGAGIGDRFLKHTERTHVLLHIVSA 246 PG+ + + + R L + E ++H+V A Sbjct: 79 PGMYSLLPITEEEAVSRRLLLN-EHPEAVVHVVDA 112 >gi|167623018|ref|YP_001673312.1| GTP-binding protein Era [Shewanella halifaxensis HAW-EB4] gi|167353040|gb|ABZ75653.1| GTP-binding protein Era [Shewanella halifaxensis HAW-EB4] Length = 330 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I + P TT + +GI +G ++ + D PG+ Sbjct: 39 VAIVGRPNVGKSTLLNKLLGQKISITSKKPQTTRHRIMGIHTDGPRQVVFIDTPGL 94 >gi|166365240|ref|YP_001657513.1| GTP-binding protein [Microcystis aeruginosa NIES-843] gi|166087613|dbj|BAG02321.1| GTP-binding protein [Microcystis aeruginosa NIES-843] Length = 547 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 11/95 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGI---VKEGYKEFILAD 212 +A + I+G NAGKST + ++T A+ AD F TL P L I + + +L D Sbjct: 379 VASVAIVGYTNAGKSTLINALTAAEVYTADQLFATLDPTTRRLTITDPLSQVSHTLLLTD 438 Query: 213 IPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIV 244 G I + D F L+ LLH+V Sbjct: 439 TVGFIHEL--PPSLVDAFRATLEEVTEAEALLHLV 471 >gi|91069954|gb|ABE10882.1| GTP-binding protein [uncultured Prochlorococcus marinus clone ASNC2259] Length = 457 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 7/93 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI--IK 218 + IIG PN GKS+ L S+ K I +D TT ++K+G + + D GI K Sbjct: 179 MSIIGRPNVGKSSLLNSICGEKRAIVSDISGTTTDSIDTLIKKGDNHWKIIDTAGIRRKK 238 Query: 219 NAHQGA---GIGDRFLKHTERTHVLLHIVSALE 248 N GA GI +R K +R+ V + ++ A++ Sbjct: 239 NVKYGAEFFGI-NRAFKSIDRSDVCVLVIDAVD 270 >gi|299143729|ref|ZP_07036809.1| ferrous iron transport protein B [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518214|gb|EFI41953.1| ferrous iron transport protein B [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 716 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 18/170 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN+GK+T ++T + + ++P T+ G K+ ++ D+PGI + Sbjct: 5 IALAGNPNSGKTTLFNALTGSHQYVGNWPGVTVEKKTGEYKKN-RDIKFTDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E V++ ++ A +E N+ A Q SEL I I+ L Sbjct: 64 YTLEEVVSRDYLLNEHPDVIIDVIDASNIERNLYLATQL---------SELGIPI-ILAL 113 Query: 279 SQIDTV--DSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 + +D V ++D + +K E C V E S++ + +++ D++ Sbjct: 114 NMMDVVKKNNDIIDTEKLEKLLNCKVV--EISALKNFNLDYLIKVATDEV 161 >gi|284047992|ref|YP_003398331.1| GTP-binding protein Era [Acidaminococcus fermentans DSM 20731] gi|283952213|gb|ADB47016.1| GTP-binding protein Era [Acidaminococcus fermentans DSM 20731] Length = 308 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 3/103 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PNAGKST + + K I+D P TT L I+ + + D PG+ K Sbjct: 14 VAVVGRPNAGKSTLVNHLVGEKVAIISDRPQTTRNRILSILSTEEAQMVFLDTPGLHKPQ 73 Query: 221 HQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL 262 + G + L + V+L +V A E+ + Q IL+ L Sbjct: 74 DKLGEHMVQAALNAIKEVDVVLFVVDASEKRGKGE-QVILERL 115 >gi|226490180|emb|CAX69332.1| signal recognition particle receptor, B subunit 159 [Schistosoma japonicum] Length = 223 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Query: 157 KLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 K + + IG +AGK+T +S+ P FT+L N+ V+ K F+L D+PG Sbjct: 28 KRLKHVLFIGTCDAGKTTLFSSIVYGNP---SSTFTSLNENVSNVQINKKNFVLVDVPG 83 >gi|163814122|ref|ZP_02205514.1| hypothetical protein COPEUT_00275 [Coprococcus eutactus ATCC 27759] gi|158450571|gb|EDP27566.1| hypothetical protein COPEUT_00275 [Coprococcus eutactus ATCC 27759] Length = 829 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 18/162 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T A + ++P T+ G +K G K+ I+ D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNALTGANQYVGNWPGVTVEKKEGKLK-GNKDVIITDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E +++I+ + +E N+ + Q I EL + ++ + Sbjct: 64 YTLEEVVARNYLIQEYPDAIINIIDGTNIERNLYLSTQLI---------ELGIPV-VMAV 113 Query: 279 SQIDTV--DSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 + +D V + D++ K + A C V E S++ G GI ++ Sbjct: 114 NMMDLVKKNGDSINIKNLKEALGCEVV--EISALKGTGIDEV 153 >gi|152990747|ref|YP_001356469.1| GTP-binding protein Era [Nitratiruptor sp. SB155-2] gi|151422608|dbj|BAF70112.1| GTP-binding protein Era [Nitratiruptor sp. SB155-2] Length = 293 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 31/143 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + ++G PNAGKST L + K + + L IV G + + D PG+ Sbjct: 9 VALVGRPNAGKSTLLNWLLGEKIAMVSHKAQATRKRLYAIVMHGNDQIVFIDTPGL---- 64 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQC--------ILDELSAYNSEL--- 269 H+ + ++F+ LEE ++A C + D ++ Y L Sbjct: 65 HEKERLLNKFM---------------LEEAIKAIGDCDLILFLAPVTDPITHYEKFLKLA 109 Query: 270 RKKIEIVGLSQIDTVDSDTLARK 292 + + IV L++ID V ++ L +K Sbjct: 110 KNRPHIVVLTKIDMVSNEKLLQK 132 >gi|269978226|ref|ZP_06185176.1| ribosome-associated GTPase EngA [Mobiluncus mulieris 28-1] gi|269933735|gb|EEZ90319.1| ribosome-associated GTPase EngA [Mobiluncus mulieris 28-1] Length = 547 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKS+ L S+ + ++D P TT P +++ KE++ D GI + Sbjct: 289 VALVGRPNVGKSSLLNSLAGSGRSVVSDTPGTTRDPVDEVLELDGKEWVFVDTAGIKRRI 348 Query: 221 HQGAG 225 Q G Sbjct: 349 KQTVG 353 >gi|301100808|ref|XP_002899493.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262103801|gb|EEY61853.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 877 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 9/63 (14%) Query: 161 DIGIIGLPNAGKSTFL-----ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 D+ +IG PNAGKS+ + +V+ PK TT LGI EG + D PG Sbjct: 221 DLAVIGRPNAGKSSIMNRLLSVTVSAVSPKYN----TTRDRILGIFTEGDVQLSFYDTPG 276 Query: 216 IIK 218 +IK Sbjct: 277 LIK 279 >gi|170760623|ref|YP_001787836.1| GTP-binding protein EngA [Clostridium botulinum A3 str. Loch Maree] gi|238688523|sp|B1KX71|DER_CLOBM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|169407612|gb|ACA56023.1| ribosome-associated GTPase EngA [Clostridium botulinum A3 str. Loch Maree] Length = 439 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 17/172 (9%) Query: 161 DIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 +I IG PN GKS+ + + + ++D P TT V + EF L D G+ + Sbjct: 178 NIAFIGKPNVGKSSLINKLLGEERLIVSDIPGTTRDSIDSYVDTEFGEFTLIDTAGLRRK 237 Query: 220 AHQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEI 275 + I R ER V + ++ A+ E + Q I+ Y ++ K I + Sbjct: 238 SKVKEEIERYSVIRTYASIERADVCILMIDAI-EGISEQDQKII----GYAHDINKAI-L 291 Query: 276 VGLSQIDTVDSD--TLARKKNELATQCGQVPFE----FSSITGHGIPQILEC 321 V +++ D V+ D T+ + K EL +P+ S+ TG + ++L+ Sbjct: 292 VIVNKWDLVEKDDKTMDKFKKELKVNLSFMPYAKYLFISAKTGQRVVKVLQT 343 >gi|257870017|ref|ZP_05649670.1| GTP-binding protein [Enterococcus gallinarum EG2] gi|257804181|gb|EEV33003.1| GTP-binding protein [Enterococcus gallinarum EG2] Length = 412 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 11/110 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP--NLGIVKEGYKEFILADIPGIIKN 219 IG+IG NAGKST L +T A D F TL P + EG E + D G I+ Sbjct: 197 IGLIGYTNAGKSTILNLLTSADTYEQDQLFATLDPLTKRWRLPEGL-EVTVTDTVGFIQE 255 Query: 220 AHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQAAYQCIL---DELS 263 + D F L+ ++ +LLH+V A + Q + +L +ELS Sbjct: 256 L--PTQLIDAFHSTLEESQNMDLLLHVVDAGSHDRQQQEKTVLALMEELS 303 >gi|224012853|ref|XP_002295079.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220969518|gb|EED87859.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 412 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGII- 217 A + I+G PN GKST L S+ IA P TT + LG++ + + L D PGII Sbjct: 109 ALVTILGKPNMGKSTLLNSLLSDNLAIATSRPQTTRHAILGVMTSDHNQLCLTDTPGIID 168 Query: 218 KNAHQ 222 K A++ Sbjct: 169 KTAYK 173 >gi|114762884|ref|ZP_01442316.1| GTP-binding protein HflX [Pelagibaca bermudensis HTCC2601] gi|114544494|gb|EAU47501.1| GTP-binding protein HflX [Roseovarius sp. HTCC2601] Length = 417 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 17/173 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKNA 220 + ++G NAGKST +T A+ D F TL P + VK + IL+D G I + Sbjct: 199 VALVGYTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRAVKLPTGIDVILSDTVGFISDL 258 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKIEIV 276 R L+ +++H+ N + A ILD L + +++ +V Sbjct: 259 PTELVAAFRATLEEVLAADIIVHVRDISHPNTEEQAADVAAILDSLG-----VDEEVPLV 313 Query: 277 GLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSITGHGIPQILECLHDKI 326 L +D LA +E Q + F S++TG G+ +LE + +++ Sbjct: 314 ELWN----KTDRLAPDVHEGVLQRAAREENIFAVSALTGEGLDTMLEAITERL 362 >gi|331648208|ref|ZP_08349298.1| ribosome-associated GTPase EngA [Escherichia coli M605] gi|26109281|gb|AAN81483.1|AE016764_165 Probable GTP-binding protein engA [Escherichia coli CFT073] gi|331043068|gb|EGI15208.1| ribosome-associated GTPase EngA [Escherichia coli M605] Length = 503 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 12 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 71 Query: 215 GIIKNAHQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 72 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREK 124 Query: 273 IEIVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 125 PTFLVANKTDGLDPD 139 >gi|146279857|ref|YP_001170015.1| hypothetical protein Rsph17025_3855 [Rhodobacter sphaeroides ATCC 17025] gi|145558098|gb|ABP72710.1| hypothetical protein Rsph17025_3855 [Rhodobacter sphaeroides ATCC 17025] Length = 776 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 15/54 (27%), Positives = 31/54 (57%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 + ++G PN GK+T ++T + + ++P T+ G+V+ G + + D+PG Sbjct: 6 VALLGNPNCGKTTLFNALTGTRQMVGNWPGVTVEKKEGLVRIGSHTWTVVDLPG 59 >gi|113476532|ref|YP_722593.1| GTP-binding protein Era [Trichodesmium erythraeum IMS101] gi|110167580|gb|ABG52120.1| GTP-binding protein Era [Trichodesmium erythraeum IMS101] Length = 310 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 +GIIG PN GKST + + K I T L GI+ + I D PGI K Sbjct: 21 VGIIGRPNVGKSTLMNQLVGQKVAITSPVAQTTRNRLRGILTTQAAQIIFVDTPGIHKPQ 80 Query: 221 HQ 222 HQ Sbjct: 81 HQ 82 >gi|326794406|ref|YP_004312226.1| GTP-binding protein Era-like-protein [Marinomonas mediterranea MMB-1] gi|326545170|gb|ADZ90390.1| GTP-binding protein Era-like-protein [Marinomonas mediterranea MMB-1] Length = 339 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 6/75 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + + K I P TT LG+ EG + I D PG+ Sbjct: 51 VAIVGRPNVGKSTLMNHILGQKLSITSRKPQTTRDQILGVKTEGSIQTIYVDTPGL---- 106 Query: 221 HQGAGIG-DRFLKHT 234 H G +RF+ T Sbjct: 107 HLGQQKAINRFMNKT 121 >gi|183219489|ref|YP_001837485.1| GTP-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909632|ref|YP_001961187.1| GTPase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774308|gb|ABZ92609.1| GTPase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777911|gb|ABZ96209.1| GTP-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 518 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 15/170 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 +GI+G NAGKST L ++T + D F TL P ++ +E I++D G I + Sbjct: 347 VGIVGYTNAGKSTLLNALTNSTVIAEDKLFATLDPTTRRIRFPEEREIIISDTVGFIHDL 406 Query: 221 HQGAGIGDRFLKHTER---THVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + F E +LLH+V N + L++ + L + +V Sbjct: 407 --PPDLSQAFKATLEELGDADLLLHVVDVTNPNYTEQMDAVDTILNSLH--LNEIPRMVV 462 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 ++ D +D +T +++ + G + S++T G+ ++L+ + +I+ Sbjct: 463 FNKADGLDEET-----HDILQKNGALL--VSAVTREGLSKLLDLIEYEIW 505 >gi|167386440|ref|XP_001733396.1| hypothetical protein [Entamoeba dispar SAW760] gi|165899314|gb|EDR25947.1| hypothetical protein, conserved [Entamoeba dispar SAW760] Length = 135 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 15/33 (45%), Positives = 23/33 (69%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFT 192 A +G++G P+ G+ST L ++T + KIA Y FT Sbjct: 61 ARVGMVGFPSVGESTLLTAMTPTESKIAAYEFT 93 >gi|152971372|ref|YP_001336481.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895966|ref|YP_002920702.1| GTP-binding protein EngA [Klebsiella pneumoniae NTUH-K2044] gi|262040248|ref|ZP_06013499.1| ribosome-associated GTPase EngA [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330007822|ref|ZP_08306080.1| ribosome biogenesis GTPase Der [Klebsiella sp. MS 92-3] gi|166198723|sp|A6TCD0|DER_KLEP7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|150956221|gb|ABR78251.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548284|dbj|BAH64635.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259042357|gb|EEW43377.1| ribosome-associated GTPase EngA [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328535310|gb|EGF61796.1| ribosome biogenesis GTPase Der [Klebsiella sp. MS 92-3] Length = 492 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 4/92 (4%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + +EFI D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSA 246 I +G + ++ L E V+L +V A Sbjct: 60 IDGTEEGVETRMAEQSLLAIEEADVVLFMVDA 91 >gi|30250250|ref|NP_842320.1| GTP-binding protein Era [Nitrosomonas europaea ATCC 19718] gi|81838662|sp|Q82SJ6|ERA_NITEU RecName: Full=GTPase Era gi|30181045|emb|CAD86235.1| Type 2 KH domain [Nitrosomonas europaea ATCC 19718] Length = 296 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPG 215 I I+G PN GKST L + + K I TT + GI+ + +FI D PG Sbjct: 11 ISIVGRPNVGKSTLLNHLIKQKISITSRKAQTTRHRIHGILTDAQSQFIFVDTPG 65 >gi|294637612|ref|ZP_06715891.1| GTP-binding protein Era [Edwardsiella tarda ATCC 23685] gi|291089167|gb|EFE21728.1| GTP-binding protein Era [Edwardsiella tarda ATCC 23685] Length = 176 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 IAIVGRPNVGKSTLLNQLLGQKVSITSRKPQTTRHRIMGIHTEGPYQAIYVDTPGL 66 >gi|317128319|ref|YP_004094601.1| GTP-binding protein Era [Bacillus cellulosilyticus DSM 2522] gi|315473267|gb|ADU29870.1| GTP-binding protein Era [Bacillus cellulosilyticus DSM 2522] Length = 298 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 4/77 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PN GKST L V K I +D TT G+ E + I D PGI K Sbjct: 8 VALIGRPNVGKSTLLNEVLGQKIAIMSDKAQTTRNRIQGVYTEDRGQVIFIDTPGIHKPK 67 Query: 221 HQGAGIGDRFLKHTERT 237 H+ +GD +K + T Sbjct: 68 HR---LGDFMMKIAQTT 81 >gi|256827700|ref|YP_003151659.1| ferrous iron transporter FeoB [Cryptobacterium curtum DSM 15641] gi|256583843|gb|ACU94977.1| ferrous iron transporter FeoB [Cryptobacterium curtum DSM 15641] Length = 824 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ ++G PN GK+T ++T A + ++P T+ G +K G+ + + D+PGI Sbjct: 4 NVALVGNPNCGKTTLFNALTGANQYVGNWPGVTVEKKTGKLK-GHSDVTIVDLPGI 58 >gi|219852901|ref|YP_002467333.1| ferrous iron transport protein B [Methanosphaerula palustris E1-9c] gi|219547160|gb|ACL17610.1| ferrous iron transport protein B [Methanosphaerula palustris E1-9c] Length = 666 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 3/100 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GKST ++T + ++ ++P T+ G + G E + D+PG A Sbjct: 7 IALAGNPNVGKSTIFNALTGFRQQVGNWPGVTVEKKSGFARLGEYEIEVVDLPGTYSLTA 66 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCI 258 + + R E+ V++H+V A E N+ Q + Sbjct: 67 YSEDEVIARDYIIEEKPDVVVHVVDATNFERNLYLTTQLM 106 >gi|288934098|ref|YP_003438157.1| ribosome-associated GTPase EngA [Klebsiella variicola At-22] gi|290508296|ref|ZP_06547667.1| ribosome-associated GTPase EngA [Klebsiella sp. 1_1_55] gi|288888827|gb|ADC57145.1| ribosome-associated GTPase EngA [Klebsiella variicola At-22] gi|289777690|gb|EFD85687.1| ribosome-associated GTPase EngA [Klebsiella sp. 1_1_55] Length = 492 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 4/92 (4%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +I + ++G PN GKST +TR + +AD+P T G + +EFI D G Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSA 246 I +G + ++ L E V+L +V A Sbjct: 60 IDGTEEGVETRMAEQSLLAIEEADVVLFMVDA 91 >gi|149369521|ref|ZP_01889373.1| GTP-binding protein HflX [unidentified eubacterium SCB49] gi|149356948|gb|EDM45503.1| GTP-binding protein HflX [unidentified eubacterium SCB49] Length = 403 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 4/138 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN-A 220 + ++G N GKST + ++++ + F TL + V G F+L D G I+ Sbjct: 202 VALVGYTNVGKSTLMNVISKSDVFAENKLFATLDTTVRKVVIGNLPFLLTDTVGFIRKLP 261 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKIEIVG 277 Q L +LLH+V E+ + + IL+E+ + + + + Sbjct: 262 TQLVESFKSTLDEVREADLLLHVVDISHESFEDHIDSVNVILNEIKSSDKPVLMVFNKID 321 Query: 278 LSQIDTVDSDTLARKKNE 295 + +T+D+D L +K + Sbjct: 322 AYEPETIDADDLVTEKTK 339 >gi|91794116|ref|YP_563767.1| GTP-binding protein Era [Shewanella denitrificans OS217] gi|91716118|gb|ABE56044.1| GTP-binding protein Era [Shewanella denitrificans OS217] Length = 334 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 26/178 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI---- 216 + I+G PN GKST L + K I + P TT + +GI +G + + D PG+ Sbjct: 43 VAIVGRPNVGKSTLLNKLLGQKVSITSKKPQTTRHRIMGIHTDGPSQVVFIDTPGLHIDE 102 Query: 217 ------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELR 270 + N + + D +++ +V A+ N + +L ++ Y+ + R Sbjct: 103 QRAINRLMNRAAASSLAD--------VSMVIFVVDAM--NWTPDDEMVLKKI-GYSDQER 151 Query: 271 KKIEIVGLSQIDTV-DSDTLARKKNELATQCG-QVPFEFSSITGHGIPQILECLHDKI 326 K ++ ++++D + D + L NE+A + S+ G I +IL+ + + Sbjct: 152 KV--VLAINKVDNIKDKEALFPYLNEIAKKFNFDEILPISATKGTNIQRILDMARESL 207 >gi|73856514|gb|AAZ89221.1| putative GTP-binding factor [Shigella sonnei Ss046] Length = 503 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 12 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 71 Query: 215 GIIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 72 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREK 124 Query: 273 IEIVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 125 PTFLVANKTDGLDPD 139 >gi|34498295|ref|NP_902510.1| GTP-binding protein [Chromobacterium violaceum ATCC 12472] gi|34104149|gb|AAQ60508.1| probable GTP-binding protein [Chromobacterium violaceum ATCC 12472] Length = 462 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGIIKNA 220 + ++G NAGKST + ++T ++ +A+ F TL + ++ E +++D G IKN Sbjct: 228 VSLVGYTNAGKSTLMRALTGSEVLVANKLFATLDTTVRVLHPESVPRVLVSDTVGFIKNL 287 Query: 221 HQG-AGIGDRFLKHTERTHVLLHIVSA 246 G L+ +LLH + A Sbjct: 288 PHGLVASFKSTLEEALDASLLLHAIDA 314 >gi|306818602|ref|ZP_07452325.1| ribosome-associated GTPase EngA [Mobiluncus mulieris ATCC 35239] gi|304648775|gb|EFM46077.1| ribosome-associated GTPase EngA [Mobiluncus mulieris ATCC 35239] Length = 526 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKS+ L S+ + ++D P TT P +++ KE++ D GI + Sbjct: 268 VALVGRPNVGKSSLLNSLAGSGRSVVSDTPGTTRDPVDEVLELDGKEWVFVDTAGIKRRI 327 Query: 221 HQGAG 225 Q G Sbjct: 328 KQTVG 332 >gi|331643131|ref|ZP_08344266.1| ribosome-associated GTPase EngA [Escherichia coli H736] gi|331653939|ref|ZP_08354940.1| ribosome-associated GTPase EngA [Escherichia coli M718] gi|331678502|ref|ZP_08379177.1| ribosome-associated GTPase EngA [Escherichia coli H591] gi|332278336|ref|ZP_08390749.1| conserved hypothetical protein [Shigella sp. D9] gi|25328223|pir||E91050 probable GTP-binding factor [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) gi|25328252|pir||A85895 probable GTP-binding factor Z3774 [imported] - Escherichia coli (strain O157:H7, substrain EDL933) gi|12516902|gb|AAG57621.1|AE005480_8 putative GTP-binding factor [Escherichia coli O157:H7 str. EDL933] gi|13362843|dbj|BAB36796.1| putative GTP-binding factor [Escherichia coli O157:H7 str. Sakai] gi|209763418|gb|ACI80021.1| putative GTP-binding factor [Escherichia coli] gi|209763420|gb|ACI80022.1| putative GTP-binding factor [Escherichia coli] gi|209763422|gb|ACI80023.1| putative GTP-binding factor [Escherichia coli] gi|209763426|gb|ACI80025.1| putative GTP-binding factor [Escherichia coli] gi|331039929|gb|EGI12149.1| ribosome-associated GTPase EngA [Escherichia coli H736] gi|331048788|gb|EGI20864.1| ribosome-associated GTPase EngA [Escherichia coli M718] gi|331074962|gb|EGI46282.1| ribosome-associated GTPase EngA [Escherichia coli H591] gi|332100688|gb|EGJ04034.1| conserved hypothetical protein [Shigella sp. D9] Length = 503 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 12 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 71 Query: 215 GIIKNAHQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 72 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREK 124 Query: 273 IEIVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 125 PTFLVANKTDGLDPD 139 >gi|331673966|ref|ZP_08374729.1| ribosome-associated GTPase EngA [Escherichia coli TA280] gi|331069239|gb|EGI40631.1| ribosome-associated GTPase EngA [Escherichia coli TA280] Length = 503 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 12 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 71 Query: 215 GIIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 72 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREK 124 Query: 273 IEIVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 125 PTFLVANKTDGLDPD 139 >gi|283780168|ref|YP_003370923.1| ferrous iron transport protein B [Pirellula staleyi DSM 6068] gi|283438621|gb|ADB17063.1| ferrous iron transport protein B [Pirellula staleyi DSM 6068] Length = 747 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 23/161 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G PN GKST +++ + + +YP T+ +G + + F L D+PG A Sbjct: 12 VALLGNPNTGKSTLFSALAGIRQRTGNYPGVTVEKKIGRTEFEGQSFELVDLPGTYSLAP 71 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSALEENVQA--AYQCILDELSAYNSE----LRKKIEI 275 + + V + ++ L + V CI+D A N E L +I Sbjct: 72 R-----------SPDEMVAVEVLLGLRKEVPPPDVVLCIVD---ASNLERNFYLLSQILE 117 Query: 276 VGLSQIDTVDSDTLARKKN---ELATQCGQVPFEFSSITGH 313 +GL + V+ LA+ K +LA Q+P + H Sbjct: 118 LGLPTVLAVNMVDLAKSKGLTLDLAKLAAQLPIPIIPLEAH 158 >gi|223983912|ref|ZP_03634072.1| hypothetical protein HOLDEFILI_01353 [Holdemania filiformis DSM 12042] gi|223964104|gb|EEF68456.1| hypothetical protein HOLDEFILI_01353 [Holdemania filiformis DSM 12042] Length = 723 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 16/158 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 I + G PN+GK+T ++T + + ++P T+ G +K+ K+ + D+PGI + Sbjct: 5 IALAGNPNSGKTTLFNALTGSNQFVGNWPGVTVEKKEGRLKD-QKDVTITDLPGIYSLSP 63 Query: 222 QGAG--IGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 + +L H ER +L+IV + LE N+ Q + EL + +V Sbjct: 64 YTLEEVVARNYLIH-ERPEAILNIVDGTNLERNLYLTTQLL---------ELGIPV-VVA 112 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 ++ ID V+ + +LA G S++ GI Sbjct: 113 VNMIDVVNKNGDQIDTQQLAKALGCEVVTISALKQTGI 150 >gi|167748941|ref|ZP_02421068.1| hypothetical protein ANACAC_03722 [Anaerostipes caccae DSM 14662] gi|167651563|gb|EDR95692.1| hypothetical protein ANACAC_03722 [Anaerostipes caccae DSM 14662] Length = 412 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 6/103 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + I+G NAGKST L T A D F TL P V+ + ++ D G I+ Sbjct: 202 VCIVGYTNAGKSTLLNYFTDAGVLEEDQLFATLDPTTKSVELNSGQTVLMTDTVGFIRKL 261 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCI 258 H L+ + + ++LH+V +E+ ++A Y+ + Sbjct: 262 PHHLVDAFKSTLEEAKYSDIILHVVDCSNPFMEQQMEAVYETL 304 >gi|124809194|ref|XP_001348513.1| conserved protein, unknown function [Plasmodium falciparum 3D7] gi|23497408|gb|AAN36952.1| conserved protein, unknown function [Plasmodium falciparum 3D7] Length = 504 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 9/61 (14%) Query: 162 IGIIGLPNAGKSTFLAS-----VTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 I +IG PNAGKS+ L S ++ PKI TT Y GI + + I D PGI Sbjct: 100 IALIGAPNAGKSSLLNSILNKTISAVSPKIN----TTKYDIKGIYSKDNVQLIFIDSPGI 155 Query: 217 I 217 I Sbjct: 156 I 156 >gi|81242044|gb|ABB62754.1| putative GTP-binding factor [Shigella dysenteriae Sd197] Length = 503 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 12 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 71 Query: 215 GIIKNAHQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 72 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREK 124 Query: 273 IEIVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 125 PTFLVANKTDGLDPD 139 >gi|71030344|ref|XP_764814.1| GTP-binding nuclear protein 1 [Theileria parva strain Muguga] gi|68351770|gb|EAN32531.1| GTP-binding nuclear protein 1, putative [Theileria parva] Length = 597 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 29/54 (53%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + G PN GKS+F+ V++A + Y FTT +G Y + + D PG++ Sbjct: 177 LTGYPNVGKSSFMNLVSKANVDVQPYAFTTKSLYVGHFDYNYLRWQVIDTPGLL 230 >gi|326333977|ref|ZP_08200207.1| GTP-binding protein Era [Nocardioidaceae bacterium Broad-1] gi|325948256|gb|EGD40366.1| GTP-binding protein Era [Nocardioidaceae bacterium Broad-1] Length = 315 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + +G PNAGKST ++ K I +D P TT GIV + IL D PGI Sbjct: 18 VSFVGRPNAGKSTLTNALVGTKVAITSDKPQTTRTVVKGIVHRPDGQLILVDTPGI 73 >gi|313665394|ref|YP_004047265.1| GTP-binding protein Era [Mycoplasma leachii PG50] gi|312949205|gb|ADR23801.1| GTP-binding protein Era [Mycoplasma leachii PG50] Length = 301 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 11/166 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIV-KEGYKEFILADIPGIIKN 219 + IIG PN GKST L + K I + P TT GI+ K+ + + D PG+ Sbjct: 9 VSIIGRPNVGKSTLLNKLIGEKISIVTNKPQTTRNNIRGILTKKDQYQIVFIDTPGVHTT 68 Query: 220 AHQ-GAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 Q + LK T+ V+L + + +E + +L ++ + +I+ + Sbjct: 69 KKQLDKVLNTSALKSTKDVDVILFLAPS-DEVIGKNDLFLLKQIKNLDV-----FKILVI 122 Query: 279 SQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQILECL 322 ++ D+V + L K NE + Q SSIT I ++LE + Sbjct: 123 TKADSVTKEQLILKANEWSAYQDQFDEIIITSSITNLNIEKLLELI 168 >gi|300904315|ref|ZP_07122172.1| ribosome-associated GTPase EngA [Escherichia coli MS 84-1] gi|300403747|gb|EFJ87285.1| ribosome-associated GTPase EngA [Escherichia coli MS 84-1] Length = 492 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 67 Query: 215 GIIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 68 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREK 120 Query: 273 IEIVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 121 PTFLVANKTDGLDPD 135 >gi|325680801|ref|ZP_08160339.1| ribosome biogenesis GTP-binding protein YlqF [Ruminococcus albus 8] gi|324107581|gb|EGC01859.1| ribosome biogenesis GTP-binding protein YlqF [Ruminococcus albus 8] Length = 297 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%) Query: 164 IIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 I+G+PN GKS+F+ + AK K+ D P T + EG++ L D+PG++ Sbjct: 129 IVGIPNVGKSSFINRLAGAKLAKVEDRPGVTRGKQWVALDEGFE---LLDMPGVLWPKFD 185 Query: 223 GAGIGDRF 230 +G+R Sbjct: 186 DKLVGERL 193 >gi|47223730|emb|CAF98500.1| unnamed protein product [Tetraodon nigroviridis] Length = 359 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + + +IG PNAGKST + R ++ TT LG++ EG + IL D PG+ Sbjct: 18 VLKVAVIGAPNAGKSTLSNQLLGRKVFAVSRKVHTTRNRALGVLTEGDTQIILLDTPGL 76 >gi|326381616|ref|ZP_08203310.1| GTPase Era [Gordonia neofelifaecis NRRL B-59395] gi|326199863|gb|EGD57043.1| GTPase Era [Gordonia neofelifaecis NRRL B-59395] Length = 298 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 12/145 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I +G PN GKST ++ K I ++ P TT + GIV + IL D PG+ + Sbjct: 9 ICFVGRPNTGKSTLTNALVGDKVAITSNRPQTTRHTIRGIVNRPDAQLILVDTPGLHRPR 68 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVG 277 +G R T+ + ++ +E + + I++E+ A RK VG Sbjct: 69 ---TLLGQRLNDLVRETYADVDVICVCIPADEAIGPGDRRIIEEIQATTPRTRK----VG 121 Query: 278 L-SQIDTVDSDTLARKKNELATQCG 301 + ++ID V + + + EL+ G Sbjct: 122 IVTKIDRVGHEKVVAQLLELSKLMG 146 >gi|319441573|ref|ZP_07990729.1| putative GTP-binding protein [Corynebacterium variabile DSM 44702] Length = 483 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 15/167 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 +A + I G NAGKS+ L ++T A + D F TL P + +G + + +D G Sbjct: 258 VAQVAIAGYTNAGKSSLLNALTGAGVLVEDALFATLDPTTRRAELADG-RTVVFSDTVGF 316 Query: 217 IK-NAHQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRK 271 I+ Q L+ V+LH+V + E + AA ++ E++ E Sbjct: 317 IRFLPTQLVEAFRSTLEEVMAADVVLHVVDGSDPFPMEQI-AAVNKVIGEIAEETGE-DA 374 Query: 272 KIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 EI+ ++++D D LA +N L V F S+ TG GI ++ Sbjct: 375 PPEILVVNKVDAADPLVLADLRNRL----DDVIF-VSASTGEGIAEL 416 >gi|154314873|ref|XP_001556760.1| GTP-binding protein [Botryotinia fuckeliana B05.10] gi|150848316|gb|EDN23509.1| GTP-binding protein [Botryotinia fuckeliana B05.10] Length = 369 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 14/119 (11%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ 222 GI+GL N GKST ++T+ + + T + + I+K F++ D + K Sbjct: 24 GIVGLANVGKSTLFQAITKC--SLGNPAVKTSHSHPSILKNLELCFLMTDTTALRK---- 77 Query: 223 GAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAYNSELR-KKIEIV 276 G+G+ FL H + +V ++ +++ + D L+ + ELR K IE V Sbjct: 78 --GLGNAFLSHIRAVDAIFQVVRCFDDAEIIHIEGDVDPVRD-LTIISDELRIKDIEFV 133 >gi|118473800|ref|YP_887069.1| GTP-binding protein [Mycobacterium smegmatis str. MC2 155] gi|118175087|gb|ABK75983.1| GTP-binding protein [Mycobacterium smegmatis str. MC2 155] Length = 470 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 38/177 (21%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 I + I+G NAGKS+ L ++T A + + F TL P G ++G + F+L D G Sbjct: 245 IPSVAIVGYTNAGKSSLLNALTGAGVLVENALFATLEPTTRRGEFEDG-RPFVLTDTVGF 303 Query: 217 IKNAHQGAGIGDRF---LKHTERTHVLLHIVSALEENVQA---AYQCILDELSAYNSELR 270 ++ H + + F L+ +L+H+V + N A A + +++E+ A ++ Sbjct: 304 VR--HLPTQLVEAFRSTLEEVVDADLLIHVVDGSDVNPLAQINAVRTVINEVVA-EYDIA 360 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIF 327 E++ +++ID + TG G+ Q+ L D +F Sbjct: 361 PPPELLVVNKID--------------------------AATGVGLAQLRRALPDAVF 391 >gi|256832283|ref|YP_003161010.1| GTP-binding proten HflX [Jonesia denitrificans DSM 20603] gi|256685814|gb|ACV08707.1| GTP-binding proten HflX [Jonesia denitrificans DSM 20603] Length = 509 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 14/168 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGIIKN- 219 + I+G NAGKS+ L ++T A + + F TL P + K + + LAD G +++ Sbjct: 289 VAIVGYTNAGKSSLLNALTGAGVLVQNALFATLDPTVRRTKTPDGRVYTLADTVGFVRHL 348 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKIEIV 276 HQ L+ T +++H+V + AA + +L ++ + EI+ Sbjct: 349 PHQLVEAFRSTLEETADADIIVHVVDGAHPDPAGQIAAVRTVLADIDGVSD----IPEII 404 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 +++ D + +A+ ++ + + S+ TG GI ++L + D Sbjct: 405 VVNKADIAPPEAIAQIRS-----MERDVWAVSAHTGAGIEELLGHIAD 447 >gi|226324238|ref|ZP_03799756.1| hypothetical protein COPCOM_02017 [Coprococcus comes ATCC 27758] gi|225206686|gb|EEG89040.1| hypothetical protein COPCOM_02017 [Coprococcus comes ATCC 27758] Length = 791 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 16/193 (8%) Query: 136 QAPYYANPGILGQEKIIW-LKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTL 194 Q P Y GI ++K L ++G N GK+T +T + + ++P T+ Sbjct: 102 QHPGYGEAGIFHEKKTEHPLPENTTLTFALVGNQNCGKTTLFNQLTGSNQHVGNFPGVTV 161 Query: 195 YPNLGIVKEGYKEFILADIPGIIK-NAHQGAGIGDRFLKHTERTHVLLHIVSA--LEENV 251 G++KE + + D+PGI + + I R ++ +++IV A +E N+ Sbjct: 162 DRKDGVIKE-HPNTRITDLPGIYSMSPYSSEEIVTREFLLQDKPKGIINIVDATNIERNM 220 Query: 252 QAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSIT 311 Q + E+ +V L+ +D + + + + NEL G S+ Sbjct: 221 YLTMQLMELEIPM----------VVALNMMDEMRVNGGSVRVNELEAFLGVPVVPISAAK 270 Query: 312 GHGIPQILE-CLH 323 G GI +++E LH Sbjct: 271 GEGIAELVEHALH 283 >gi|168038920|ref|XP_001771947.1| predicted protein [Physcomitrella patens subsp. patens] gi|162676729|gb|EDQ63208.1| predicted protein [Physcomitrella patens subsp. patens] Length = 570 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 20/107 (18%) Query: 124 GFGNAHFKSSTNQAPYYANPGILGQEKIIWL--------KLKLIADIGIIGLPNAGKSTF 175 G F ++T A + LG E ++ L K+K +G++G PN GKS+ Sbjct: 202 NLGRKSFTNATENANALQSSDALGAETLLQLLKNYSRNQKMKTAITVGVVGFPNVGKSSL 261 Query: 176 LASVTRAKPKIADYPFTTLYPNLGIVKEGY-----KEFILADIPGII 217 + S+ R + ++ G+ K K L D PGI+ Sbjct: 262 INSLKRTR-------VASVGATPGVTKAMQEIHLDKHVKLLDCPGIV 301 >gi|28378610|ref|NP_785502.1| GTP-binding protein Era [Lactobacillus plantarum WCFS1] gi|254556825|ref|YP_003063242.1| GTP-binding protein Era [Lactobacillus plantarum JDM1] gi|300768138|ref|ZP_07078043.1| GTP-binding protein Era [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|38257324|sp|Q88VS0|ERA_LACPL RecName: Full=GTPase Era gi|28271446|emb|CAD64351.1| GTP-binding protein [Lactobacillus plantarum WCFS1] gi|254045752|gb|ACT62545.1| GTP-binding protein Era [Lactobacillus plantarum JDM1] gi|300494202|gb|EFK29365.1| GTP-binding protein Era [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 302 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 17/168 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST L V K I +D TT GI + + D PGI K Sbjct: 12 VAIIGRPNVGKSTLLNRVVGQKVAIMSDKAQTTRNRIQGIYTTADTQMVFIDTPGIHK-- 69 Query: 221 HQGAGIGDRFLKHTERT----HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + +GD +K T +L +++A +E A I+D L +++ I +V Sbjct: 70 -PHSRLGDFMVKSALSTLGEVDAVLFMINA-DERRGAGDNFIIDRLKT----VKQPIYLV 123 Query: 277 GLSQIDTVDSDTLARKKNEL--ATQCGQVPFEFSSITGHGIPQILECL 322 +++ID V D L ++ A +V + S++ G+ + ++L L Sbjct: 124 -INKIDQVHPDHLLEIMDQYKDALPWKEV-YPISALEGNNVDELLTTL 169 >gi|329945552|ref|ZP_08293289.1| ferrous iron transport protein B [Actinomyces sp. oral taxon 170 str. F0386] gi|328528732|gb|EGF55684.1| ferrous iron transport protein B [Actinomyces sp. oral taxon 170 str. F0386] Length = 709 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 29/54 (53%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 I + G PNAGK++ ++T K +YP T+ +LG K G + D+PG Sbjct: 43 IALAGAPNAGKTSIYNALTGLHAKTGNYPGVTVQRSLGTCKIGGTTLTIEDLPG 96 >gi|209763424|gb|ACI80024.1| putative GTP-binding factor [Escherichia coli] Length = 503 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 12 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 71 Query: 215 GIIKNAHQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 72 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREK 124 Query: 273 IEIVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 125 PTFLVANKTDGLDPD 139 >gi|159026120|emb|CAO88788.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 567 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 11/95 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN---LGI---VKEGYKEFILAD 212 +A + I+G NAGKST + ++T A+ AD F TL P L I + + +L D Sbjct: 399 VASVAIVGYTNAGKSTLINALTAAEVYTADQLFATLDPTTRRLTITDPLTQVSHTLLLTD 458 Query: 213 IPGIIKNAHQGAGIGDRF---LKHTERTHVLLHIV 244 G I + D F L+ LLH+V Sbjct: 459 TVGFIHEL--PPSLVDAFRATLEEVTEAEALLHLV 491 >gi|34557655|ref|NP_907470.1| GTP-binding protein Era [Wolinella succinogenes DSM 1740] gi|34483372|emb|CAE10370.1| GTP-BINDING PROTEIN [Wolinella succinogenes] Length = 299 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 31/143 (21%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG-IVKEGYKEFILADIPGIIKNA 220 + ++G PNAGKST L + K + + + I+ + I D PG+ Sbjct: 13 VAVVGRPNAGKSTLLNWLVGEKLAMVSHKANATRKRMKFIIPHQEAQIIFVDTPGL---- 68 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCIL--------DELSAYNSELRK- 271 H + ++F+ L+E ++A C L D +S Y LR Sbjct: 69 HHQEKLLNQFM---------------LQEALKAIGDCDLILFLAPVSDSISHYEEFLRVS 113 Query: 272 --KIEIVGLSQIDTVDSDTLARK 292 K ++ LS+IDTVD+ L +K Sbjct: 114 EGKKHLLLLSKIDTVDNGKLLQK 136 >gi|66815479|ref|XP_641756.1| hypothetical protein DDB_G0279259 [Dictyostelium discoideum AX4] gi|60469791|gb|EAL67778.1| hypothetical protein DDB_G0279259 [Dictyostelium discoideum AX4] Length = 841 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 6/91 (6%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYP-NLGIVKEGYKEFILADIPGIIKN 219 I I+G PNAGKS+ L + + I +D P TT P + + E L D GI + Sbjct: 347 ISIVGQPNAGKSSLLNKIIEEERSIVSDIPGTTHDPVDCNFLWRDTHELSLIDTAGIRRR 406 Query: 220 AHQGAGIGDR----FLKHTERTHVLLHIVSA 246 + G+ LK E++HV+ ++ A Sbjct: 407 STHKIGLEKSSVLWALKAIEKSHVVFIVIDA 437 >gi|260438009|ref|ZP_05791825.1| GTP-binding protein HflX [Butyrivibrio crossotus DSM 2876] gi|292809489|gb|EFF68694.1| GTP-binding protein HflX [Butyrivibrio crossotus DSM 2876] Length = 411 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 18/129 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII-KN 219 + I+G NAGKST L ++T A + F TL P G+ E ++ +L D G I K Sbjct: 201 VAIVGYTNAGKSTLLNTLTGAGILAENKLFATLDPTTRGLELESGQQILLTDTVGFISKL 260 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDEL-----------SAYNSE 268 H L+ ++LH+V A + + + D L +A+N Sbjct: 261 PHHLVEAFKSTLEEAVYADIILHVVDASNPAMDSQMYVVYDTLEKLGAGDKPIITAFN-- 318 Query: 269 LRKKIEIVG 277 KIEI G Sbjct: 319 ---KIEIAG 324 >gi|302554600|ref|ZP_07306942.1| GTP-binding protein HflX [Streptomyces viridochromogenes DSM 40736] gi|302472218|gb|EFL35311.1| GTP-binding protein HflX [Streptomyces viridochromogenes DSM 40736] Length = 497 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 15/173 (8%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I G NAGKS+ L +T A + + F TL P + + + + LAD G + Sbjct: 274 VPSVAIAGYTNAGKSSLLNRLTGAGVLVENALFATLDPTVRRAETPSGRLYTLADTVGFV 333 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQ---AAYQCILDELSAYNSELRKKI 273 ++ H ++ + ++LH+V N + AA + ++ ++ A + Sbjct: 334 RHLPHHLVEAFRSTMEEVGESDLILHVVDGSHPNPEEQLAAVREVVRDVGATDVP----- 388 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EIV +++ D D TL R + + S+ TG I Q+L + +++ Sbjct: 389 EIVVINKADLADPLTLQR-----LLRVEKRSIAVSARTGRNIDQLLALIDNEL 436 >gi|119716151|ref|YP_923116.1| GTP-binding protein Era [Nocardioides sp. JS614] gi|226741224|sp|A1SHZ4|ERA_NOCSJ RecName: Full=GTPase Era gi|119536812|gb|ABL81429.1| GTP-binding protein Era [Nocardioides sp. JS614] Length = 313 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 36/153 (23%), Positives = 70/153 (45%), Gaps = 11/153 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +G PNAGKST ++ +K I +D P TT GIV + IL D PG+ + Sbjct: 17 VSFVGRPNAGKSTLTNALVGSKVVITSDKPQTTRTVVRGIVHRDDAQLILVDTPGLHRPR 76 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSAL---EENVQAAYQCILDELSAYNSELRKKIEIVG 277 +G+R + T + +V+ E V + I++E+ +++++ ++ Sbjct: 77 ---TLLGERLNDLVKTTLAEVDVVAVCLPANEKVGPGDRFIVNEM----AKIKRTTKVAI 129 Query: 278 LSQIDTVDSDTLARKKNELATQCGQVPFEFSSI 310 ++ D D +A ++A + E++ I Sbjct: 130 ATKTDLASPDRIAEHLLDIARLGTETGTEWAEI 162 >gi|329939974|ref|ZP_08289256.1| GTP-binding protein HflX [Streptomyces griseoaurantiacus M045] gi|329300800|gb|EGG44696.1| GTP-binding protein HflX [Streptomyces griseoaurantiacus M045] Length = 497 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 17/170 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGII 217 + + I G NAGKS+ L +T A + + F TL P + + G + + LAD G + Sbjct: 274 VPSVAIAGYTNAGKSSLLNRLTGAGVLVENALFATLDPTVRRAETPGGRLYTLADTVGFV 333 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKI 273 ++ H ++ + ++LH+V + E AA + ++ ++ A + Sbjct: 334 RHLPHHLVEAFRSTMEEVGDSDLILHVVDGSHPVPEEQLAAVREVIRDVGATDVP----- 388 Query: 274 EIVGLSQIDTVDSDTLAR-KKNELATQCGQVPFEFSSITGHGIPQILECL 322 EIV +++ D D L R +NE + S+ TG GI ++L + Sbjct: 389 EIVVVNKADAADPLVLQRLLRNE------KRAIAVSARTGRGIDELLAVI 432 >gi|315925484|ref|ZP_07921695.1| GTP-binding protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315621385|gb|EFV01355.1| GTP-binding protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 438 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 16/160 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII-KNA 220 + ++G NAGKST +T A D PF TL + Y +L+D G I K Sbjct: 205 VSLVGYTNAGKSTLFNRLTSAAVHTRDAPFVTLDTTTRRINPEYGHCLLSDTVGFIDKLP 264 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKKIEIV 276 H+ L +LLH+V A + EN+ A + +L E+ A + ++ Sbjct: 265 HELIRAFRATLAAAADADLLLHVVDASDSRAAENI-AVVERVLKEIGAIHLP-----RLL 318 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQV-PFEFSSITGHGI 315 ++ID + D + + +C + F S+ TG G+ Sbjct: 319 VYNKIDRLPPDA----RTAVMARCARADTFAISAKTGEGL 354 >gi|325982003|ref|YP_004294405.1| GTP-binding proten HflX [Nitrosomonas sp. AL212] gi|325531522|gb|ADZ26243.1| GTP-binding proten HflX [Nitrosomonas sp. AL212] Length = 449 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 5/112 (4%) Query: 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFIL-ADIPGIIK 218 A + ++G NAGKST + ++T ++ +A+ F TL + + IL +D G IK Sbjct: 223 ASVALVGYTNAGKSTLMRALTGSEVLVANKLFATLDTTVRTLHPASVPRILVSDTVGFIK 282 Query: 219 NAHQG-AGIGDRFLKHTERTHVLLHIVSALE---ENVQAAYQCILDELSAYN 266 N G L +LLHI+ A + E +L+E++A + Sbjct: 283 NLPHGLVASFKSTLDEALDASLLLHIIDASDPGYERQLEVTNTVLEEIAAQD 334 >gi|227887546|ref|ZP_04005351.1| GTP-binding protein [Escherichia coli 83972] gi|300981973|ref|ZP_07175819.1| ribosome-associated GTPase EngA [Escherichia coli MS 45-1] gi|300998067|ref|ZP_07181927.1| ribosome-associated GTPase EngA [Escherichia coli MS 200-1] gi|301047143|ref|ZP_07194239.1| ribosome-associated GTPase EngA [Escherichia coli MS 185-1] gi|227835896|gb|EEJ46362.1| GTP-binding protein [Escherichia coli 83972] gi|300300945|gb|EFJ57330.1| ribosome-associated GTPase EngA [Escherichia coli MS 185-1] gi|300304046|gb|EFJ58566.1| ribosome-associated GTPase EngA [Escherichia coli MS 200-1] gi|300408868|gb|EFJ92406.1| ribosome-associated GTPase EngA [Escherichia coli MS 45-1] gi|315292449|gb|EFU51801.1| ribosome-associated GTPase EngA [Escherichia coli MS 153-1] gi|324011217|gb|EGB80436.1| ribosome-associated GTPase EngA [Escherichia coli MS 60-1] Length = 499 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 13/168 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 67 Query: 215 GIIKNAHQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 68 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREK 120 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + ++ D +D D + A G++ + ++ G G+ +LE Sbjct: 121 PTFLVANKTDGLDPDQAV--VDFYALGLGEI-YPIAASHGRGVLSLLE 165 >gi|281421767|ref|ZP_06252766.1| GTP-binding protein Era [Prevotella copri DSM 18205] gi|281404262|gb|EFB34942.1| GTP-binding protein Era [Prevotella copri DSM 18205] Length = 293 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 8/92 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + I+G PN GKST + + + IA + TT + +GIV + + +D PG++K Sbjct: 7 VNIVGNPNVGKSTLMNQLVGERISIATFKAQTTRHRIMGIVNTDDMQIVFSDTPGVLKPN 66 Query: 221 HQGAGIGDRFLKHTER----THVLLHIVSALE 248 ++ + + L +E VLL++ +E Sbjct: 67 YK---MQEMMLAFSESALADADVLLYVTDVIE 95 >gi|260588938|ref|ZP_05854851.1| ferrous iron transport protein B [Blautia hansenii DSM 20583] gi|331083337|ref|ZP_08332450.1| ferrous iron transporter B [Lachnospiraceae bacterium 6_1_63FAA] gi|260540717|gb|EEX21286.1| ferrous iron transport protein B [Blautia hansenii DSM 20583] gi|330404418|gb|EGG83963.1| ferrous iron transporter B [Lachnospiraceae bacterium 6_1_63FAA] Length = 776 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 14/161 (8%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NAH 221 ++G N GK+T +T +K + ++P T+ G++K G+ ++ D+PGI + + Sbjct: 118 ALVGNQNCGKTTLFNQLTGSKQHVGNFPGVTVDRKDGVIK-GHSNTLITDLPGIYSMSPY 176 Query: 222 QGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 I R ER +++IV A +E N+ Q + EL + +V L+ Sbjct: 177 SSEEIVTREFVIRERPKGIINIVDATNIERNMYLTMQLL---------ELGFPM-VVALN 226 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 +D + + + NE+ G S+ G GI ++++ Sbjct: 227 MMDELWENGGSVLVNEMEGALGVPVVPISAAKGEGIEELIQ 267 >gi|225423607|ref|XP_002274221.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 423 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 +GIIG PNAGKS+ V K ++ TT + LG++ +G + D PG++ Sbjct: 142 VGIIGAPNAGKSSLTNHVVGTKVAAVSRKTNTTTHEVLGVMTKGNTQICFFDTPGLM 198 >gi|66816910|ref|XP_642431.1| signal recognition particle receptor beta subunit [Dictyostelium discoideum AX4] gi|74897258|sp|Q54XX1|SRPRB_DICDI RecName: Full=Signal recognition particle receptor subunit beta; Short=SR-beta gi|60470464|gb|EAL68444.1| signal recognition particle receptor beta subunit [Dictyostelium discoideum AX4] Length = 290 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 3/62 (4%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-VKEGYKEFILADI 213 K+K +I I+GL NAGK+ L ++T KI+ + T++ N G+ + E K+ + D+ Sbjct: 81 KVKRGVNIAILGLSNAGKTALLLNLTNVDKKISTH--TSITTNNGVYITENKKKLPIIDV 138 Query: 214 PG 215 PG Sbjct: 139 PG 140 >gi|319408284|emb|CBI81937.1| GTP-binding protein Era [Bartonella schoenbuchensis R1] Length = 303 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 29/174 (16%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGI---- 216 + +IG+PNAGKST + + K I + TT GIV + +L D PG+ Sbjct: 14 VALIGVPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLVRGIVIYENTQIVLIDTPGVFRPH 73 Query: 217 -------IKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSEL 269 + A GA D L +L+ + + L + V A + E Sbjct: 74 KRLEHAMVSAAWGGARGADILL-------ILIDVQNGLSDEVDAMLNVL---------EN 117 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQV-PFEFSSITGHGIPQILECL 322 K+ +I+ L++IDTV +L ++ + + F S++ G G +L L Sbjct: 118 IKQDKILVLNKIDTVARTSLLALTAKINERMKFLQTFMISALNGSGCKDLLHYL 171 >gi|282901630|ref|ZP_06309548.1| GTP-binding protein, HSR1-related [Cylindrospermopsis raciborskii CS-505] gi|281193506|gb|EFA68485.1| GTP-binding protein, HSR1-related [Cylindrospermopsis raciborskii CS-505] Length = 602 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLG--IVKEG----YKEFILAD 212 I + ++G NAGKST L ++T A+ AD F TL P ++ +G +E ++ D Sbjct: 422 IPSVALVGYTNAGKSTLLNALTNAQVYTADQLFATLDPTTRRLVIPQGENHQVREALITD 481 Query: 213 IPGII 217 G I Sbjct: 482 TVGFI 486 >gi|270265299|ref|ZP_06193560.1| GTP-binding protein [Serratia odorifera 4Rx13] gi|270040703|gb|EFA13806.1| GTP-binding protein [Serratia odorifera 4Rx13] Length = 302 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +GI +G + I D PG+ Sbjct: 11 IAIVGRPNVGKSTLLNQLLGQKVSITSRKPQTTRHRIMGIDTDGAYQAIYVDTPGL 66 >gi|262304285|gb|ACY44735.1| GTP-binding protein [Pedetontus saltator] Length = 280 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 5/80 (6%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE----NVQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + L H+ + E+ +V+ + D L Sbjct: 35 VVDIAGLVKGASEGQGLGNAFLSHIKACDSLFHLCRSFEDGEVIHVEGEVNPVRD-LDII 93 Query: 266 NSELRKKIEIVGLSQIDTVD 285 + ELR K E + +D ++ Sbjct: 94 SEELRLKDEEYLMIHLDKLE 113 >gi|227540486|ref|ZP_03970535.1| FeoB family ferrous iron (Fe2+) uptake protein [Sphingobacterium spiritivorum ATCC 33300] gi|227239568|gb|EEI89583.1| FeoB family ferrous iron (Fe2+) uptake protein [Sphingobacterium spiritivorum ATCC 33300] Length = 693 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 15/98 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG------ 215 I ++G PN GK++ +T+ K+ +YP T+ G V + + + D+PG Sbjct: 6 IALLGNPNVGKTSLFNKITKLHQKVGNYPGITVEKREGTVSYANQTYRVIDLPGTYTLFP 65 Query: 216 -------IIKNAH--QGAGIGDRFLKHTERTHVLLHIV 244 + H QG+ D + +E TH+ IV Sbjct: 66 NSLDEEIVFNTLHNKQGSNFPDLVVVVSEPTHLKRSIV 103 >gi|269956726|ref|YP_003326515.1| ferrous iron transport protein B [Xylanimonas cellulosilytica DSM 15894] gi|269305407|gb|ACZ30957.1| ferrous iron transport protein B [Xylanimonas cellulosilytica DSM 15894] Length = 647 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 29/52 (55%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 ++G PNAGKST ++T A+ + + P TT+ G K G + D+PG Sbjct: 25 LVGNPNAGKSTLFNALTGARQTVMNAPGTTVDLQTGSWKRGRHRLTVVDLPG 76 >gi|162148045|ref|YP_001602506.1| GTP-binding protein hflX [Gluconacetobacter diazotrophicus PAl 5] gi|161786622|emb|CAP56204.1| GTP-binding protein hflX [Gluconacetobacter diazotrophicus PAl 5] Length = 428 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 17/173 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + ++G NAGKST ++T A D F TL P + GI + IL+D G I + Sbjct: 204 VALVGYTNAGKSTLFNALTGATVFAQDQLFATLDPTMRGIRLPSGRRIILSDTVGFISDL 263 Query: 221 HQGAGIGDR-FLKHTERTHVLLHI--VSALEENVQAA-YQCILDELS---AYNSELRKKI 273 R L+ V+LH+ +S + Q A + +L+ ++ + R+++ Sbjct: 264 PTELIAAFRATLEEVAEADVILHVRDISHPDSAAQRADVEDVLEGMAGSGTLEDDWRRRV 323 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I+ + L ++ + + G V S+ITG G+P +L + ++ Sbjct: 324 -------IEVQNKADLIGGRDAVPPRKGSVV--ISAITGEGLPDLLAAIDSRL 367 >gi|297738021|emb|CBI27222.3| unnamed protein product [Vitis vinifera] Length = 423 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 +GIIG PNAGKS+ V K ++ TT + LG++ +G + D PG++ Sbjct: 142 VGIIGAPNAGKSSLTNHVVGTKVAAVSRKTNTTTHEVLGVMTKGNTQICFFDTPGLM 198 >gi|146312646|ref|YP_001177720.1| GTP-binding protein EngA [Enterobacter sp. 638] gi|166920100|sp|A4WD89|DER_ENT38 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|145319522|gb|ABP61669.1| small GTP-binding protein [Enterobacter sp. 638] Length = 490 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 13/168 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G + +EFI D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I G + ++ L E ++L +V A + A I L + R+K Sbjct: 60 IDGTEDGVETRMAEQSLLAIEEADIVLFMVDA-RAGLMPADTAIAKHLRS-----REKPT 113 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + ++ D +D+D + A G++ + ++ G G+ +LE + Sbjct: 114 FLVANKTDGIDADQAV--ADFWALGLGEI-YPIAASHGRGVTSLLETV 158 >gi|317056494|ref|YP_004104961.1| GTP-binding protein Era [Ruminococcus albus 7] gi|315448763|gb|ADU22327.1| GTP-binding protein Era [Ruminococcus albus 7] Length = 298 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK 218 + I G NAGKS+ L ++ K ++D P TT G++ +G +F+ D PG+ K Sbjct: 7 VTIAGRANAGKSSLLNALVGEKIAAVSDKPQTTRTKITGVLTKGETQFVFMDTPGMHK 64 >gi|300817719|ref|ZP_07097934.1| ribosome-associated GTPase EngA [Escherichia coli MS 107-1] gi|300529707|gb|EFK50769.1| ribosome-associated GTPase EngA [Escherichia coli MS 107-1] Length = 499 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 67 Query: 215 GIIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 68 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREK 120 Query: 273 IEIVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 121 PTFLVANKTDGLDPD 135 >gi|300820819|ref|ZP_07100969.1| ribosome-associated GTPase EngA [Escherichia coli MS 119-7] gi|300927126|ref|ZP_07142874.1| ribosome-associated GTPase EngA [Escherichia coli MS 182-1] gi|300930151|ref|ZP_07145572.1| ribosome-associated GTPase EngA [Escherichia coli MS 187-1] gi|300951784|ref|ZP_07165599.1| ribosome-associated GTPase EngA [Escherichia coli MS 116-1] gi|300958859|ref|ZP_07170967.1| ribosome-associated GTPase EngA [Escherichia coli MS 175-1] gi|301302868|ref|ZP_07208996.1| ribosome-associated GTPase EngA [Escherichia coli MS 124-1] gi|301330398|ref|ZP_07223040.1| ribosome-associated GTPase EngA [Escherichia coli MS 78-1] gi|301648266|ref|ZP_07248009.1| ribosome-associated GTPase EngA [Escherichia coli MS 146-1] gi|309794442|ref|ZP_07688865.1| ribosome-associated GTPase EngA [Escherichia coli MS 145-7] gi|300314511|gb|EFJ64295.1| ribosome-associated GTPase EngA [Escherichia coli MS 175-1] gi|300416896|gb|EFK00207.1| ribosome-associated GTPase EngA [Escherichia coli MS 182-1] gi|300448981|gb|EFK12601.1| ribosome-associated GTPase EngA [Escherichia coli MS 116-1] gi|300461957|gb|EFK25450.1| ribosome-associated GTPase EngA [Escherichia coli MS 187-1] gi|300526572|gb|EFK47641.1| ribosome-associated GTPase EngA [Escherichia coli MS 119-7] gi|300841803|gb|EFK69563.1| ribosome-associated GTPase EngA [Escherichia coli MS 124-1] gi|300843627|gb|EFK71387.1| ribosome-associated GTPase EngA [Escherichia coli MS 78-1] gi|301073653|gb|EFK88459.1| ribosome-associated GTPase EngA [Escherichia coli MS 146-1] gi|308121898|gb|EFO59160.1| ribosome-associated GTPase EngA [Escherichia coli MS 145-7] gi|315256531|gb|EFU36499.1| ribosome-associated GTPase EngA [Escherichia coli MS 85-1] gi|324020071|gb|EGB89290.1| ribosome-associated GTPase EngA [Escherichia coli MS 117-3] Length = 499 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 67 Query: 215 GIIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 68 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREK 120 Query: 273 IEIVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 121 PTFLVANKTDGLDPD 135 >gi|296278291|pdb|2WIA|A Chain A, Crystal Structures Of The N-Terminal Intracellular Domain Of Feob From Klebsiella Pneumoniae In Apo Form gi|296278292|pdb|2WIA|B Chain B, Crystal Structures Of The N-Terminal Intracellular Domain Of Feob From Klebsiella Pneumoniae In Apo Form gi|296278293|pdb|2WIB|A Chain A, Crystal Structures Of The N-Terminal Intracellular Domain Of Feob From Klebsiella Pneumoniae In Gdp Binding State gi|296278294|pdb|2WIB|B Chain B, Crystal Structures Of The N-Terminal Intracellular Domain Of Feob From Klebsiella Pneumoniae In Gdp Binding State gi|296278295|pdb|2WIC|A Chain A, Crystal Structures Of The N-Terminal Intracellular Domain Of Feob From Klebsiella Pneumoniae In Gmppnp Binding State Length = 267 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 30/54 (55%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 +G+IG PN+GK+T +T A+ ++ ++ T+ GI + L D+PG Sbjct: 6 VGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGIFATTDHQVTLVDLPG 59 >gi|292669776|ref|ZP_06603202.1| GTP-binding protein Era [Selenomonas noxia ATCC 43541] gi|292648573|gb|EFF66545.1| GTP-binding protein Era [Selenomonas noxia ATCC 43541] Length = 297 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 +IG PN GKST + ++ K I +D P TT L I+ E + I D PG+ K H Sbjct: 10 AVIGRPNVGKSTLINALIGQKIAIMSDKPQTTRSRILCILTEEDAQIIFLDTPGVHKPKH 69 Query: 222 Q 222 + Sbjct: 70 K 70 >gi|255525312|ref|ZP_05392252.1| GTP-binding protein Era [Clostridium carboxidivorans P7] gi|296188181|ref|ZP_06856573.1| GTP-binding protein Era [Clostridium carboxidivorans P7] gi|255510984|gb|EET87284.1| GTP-binding protein Era [Clostridium carboxidivorans P7] gi|296047307|gb|EFG86749.1| GTP-binding protein Era [Clostridium carboxidivorans P7] Length = 293 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 1/106 (0%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I IIG PN GKST L S+ K I P TT I+ E + + D PGI K Sbjct: 7 ITIIGRPNVGKSTLLNSIMGEKLSIVSCKPQTTRNNIQTILTEKDFQLVFVDTPGIHKPK 66 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYN 266 H+ + + + + L+ ++ E+ + IL++L N Sbjct: 67 HKLGEFMVKIAQDSIKEVDLILFLTNPEDEIGKGDMYILEQLKECN 112 >gi|237785685|ref|YP_002906390.1| putative GTP-binding protein [Corynebacterium kroppenstedtii DSM 44385] gi|237758597|gb|ACR17847.1| putative GTP-binding protein [Corynebacterium kroppenstedtii DSM 44385] Length = 507 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 19/166 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGIIKN 219 I I G NAGKS+ + ++T A + D F TL P + +G + I +D G ++ Sbjct: 282 IAIAGYTNAGKSSLINAITGAGVLVEDALFATLDPTTRRAELADG-RAVIFSDTVGFVR- 339 Query: 220 AHQGAGIGDRF---LKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELRKK 272 H + + F L+ ++LH+V + + + A ++ + D ++ + Sbjct: 340 -HLPTQLVEAFRSSLEEVASADLVLHVVDGSDPFPLKQIAAVHEVLADVRNSRAETM--P 396 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 EI+ +++ID D LA+ ++EL V F S+ TG I ++ Sbjct: 397 PEIIVVNKIDQADPIVLAQLRHEL----DDVVF-VSAKTGENIDEL 437 >gi|213961788|ref|ZP_03390054.1| GTP-binding protein Era [Capnocytophaga sputigena Capno] gi|213955577|gb|EEB66893.1| GTP-binding protein Era [Capnocytophaga sputigena Capno] Length = 293 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 12/145 (8%) Query: 162 IGIIGLPNAGKSTFL-ASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + A V I TT + GIV + + +D PGIIK + Sbjct: 7 VNIIGNPNVGKSTLMNAFVGEKLSIITSKAQTTRHRIFGIVSGDDFQVVFSDTPGIIKPS 66 Query: 221 HQGAGIGDRFLKHT-ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + F+K E +L+++V E+ ++ + + ++ K+E+ L Sbjct: 67 YALQASMMDFVKSAFEDADILIYMVEIGEKELKD--EVFFNRIN--------KLEVPVLL 116 Query: 280 QIDTVDSDTLARKKNELATQCGQVP 304 I+ VD+ + + ++A +VP Sbjct: 117 LINKVDTSDQSTLEEQVAYWKEKVP 141 >gi|158320287|ref|YP_001512794.1| GTP-binding protein Era [Alkaliphilus oremlandii OhILAs] gi|189037250|sp|A8MG70|ERA_ALKOO RecName: Full=GTPase Era gi|158140486|gb|ABW18798.1| GTP-binding protein Era [Alkaliphilus oremlandii OhILAs] Length = 295 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 12/132 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + K I +D P TT + + + + D PGI K Sbjct: 8 VTIIGRPNVGKSTLMNKIIGEKIAIMSDKPQTTRNKIQCVYTQKDYQIVFLDTPGIHKPK 67 Query: 221 HQGAGIGDRFLK-HTERTHVLLHIVSALEE--NVQAAYQCILDELSAYNSELRKKIEIVG 277 H+ +G +K TE + ++ ++E ++ Q I+D+L ++ + I+ Sbjct: 68 HK---LGQYMVKIATETLKEVDAVLFVVDEGNSIGPGDQYIIDQLQGIDTPI-----ILV 119 Query: 278 LSQIDTVDSDTL 289 L++ID ++++ L Sbjct: 120 LNKIDKMNAENL 131 >gi|148653665|ref|YP_001280758.1| HSR1-like GTP-binding protein [Psychrobacter sp. PRwf-1] gi|148572749|gb|ABQ94808.1| GTP-binding protein, HSR1-related [Psychrobacter sp. PRwf-1] Length = 481 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 7/126 (5%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 + I ++G NAGKS+ + AD F TL P L + +G +L D G + Sbjct: 199 VLTISLVGYTNAGKSSLFNRLVDEDIYAADQLFATLDPTLRRMDWQGVGRVVLVDTVGFV 258 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE-----LRK 271 ++ H+ L+ T +LLH++ + ++ + + + LS ++ + Sbjct: 259 RHLPHELVESFHATLEETLEADLLLHVIDSSSPDMHEQIKAVKEVLSEIDNHVPVLNVYN 318 Query: 272 KIEIVG 277 KI+I G Sbjct: 319 KIDITG 324 >gi|51598058|ref|YP_072249.1| ferrous iron transport protein B [Yersinia pseudotuberculosis IP 32953] gi|186897258|ref|YP_001874370.1| ferrous iron transport protein B [Yersinia pseudotuberculosis PB1/+] gi|51591340|emb|CAH23006.1| ferrous iron transport protein B [Yersinia pseudotuberculosis IP 32953] gi|186700284|gb|ACC90913.1| ferrous iron transport protein B [Yersinia pseudotuberculosis PB1/+] Length = 771 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 37/164 (22%), Positives = 70/164 (42%), Gaps = 17/164 (10%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKN 219 IG+IG PNAGK+T +T A+ ++ ++ T+ G + L D+PG + Sbjct: 6 IGLIGNPNAGKTTLFNQLTGARQRVGNWAGVTVERKEGHFNTAQHQVTLVDLPGTYSLTT 65 Query: 220 AHQGAGIGDRFLKH---TERTHVLLHIVSA--LEENVQAAYQCILDELSAYNSELRKKIE 274 + + ++ H + +L++++ A LE N+ Q + + Sbjct: 66 ISEQTSLDEQIACHYILSGEADLLINVIDAVNLERNLYLTLQLLELGIPC---------- 115 Query: 275 IVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 IV L+ +D +S + N L+ + G S G GI ++ Sbjct: 116 IVALNMLDIAESQHIEIDINTLSKKLGCPVIPLVSTRGRGIDEL 159 >gi|315300482|gb|EFU59711.1| ribosome-associated GTPase EngA [Escherichia coli MS 16-3] Length = 499 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 13/168 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 67 Query: 215 GIIKNAHQGA--GIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 68 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREK 120 Query: 273 IEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + ++ D +D D + A G++ + ++ G G+ +LE Sbjct: 121 PTFLVANKTDGLDPDQAV--VDFYALGLGEI-YPIAASHGRGVLSLLE 165 >gi|301024743|ref|ZP_07188383.1| ribosome-associated GTPase EngA [Escherichia coli MS 69-1] gi|300396412|gb|EFJ79950.1| ribosome-associated GTPase EngA [Escherichia coli MS 69-1] Length = 499 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 67 Query: 215 GIIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 68 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREK 120 Query: 273 IEIVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 121 PTFLVANKTDGLDPD 135 >gi|282862300|ref|ZP_06271362.1| GTP-binding proten HflX [Streptomyces sp. ACTE] gi|282562639|gb|EFB68179.1| GTP-binding proten HflX [Streptomyces sp. ACTE] Length = 506 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 21/172 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 + + I G NAGKS+ L +T A + + F TL P + + + + LAD G + Sbjct: 284 VPSVAIAGYTNAGKSSLLNRLTGAGVLVENALFATLDPTVRRAETPSGRLYTLADTVGFV 343 Query: 218 KNAHQGAGIGDRFLKHTER---THVLLHIVS---ALEENVQAAYQCILDELSAYNSELRK 271 + H + + F E + ++LH+V + E AA + ++ ++ A + Sbjct: 344 R--HLPHHLVEAFRSTMEEVGDSDLILHVVDGAHPVPEEQLAAVREVIRDVGAVDVR--- 398 Query: 272 KIEIVGLSQIDTVDSDTLAR-KKNELATQCGQVPFEFSSITGHGIPQILECL 322 EIV +++ D D + L R +NE + S+ TG GI ++L + Sbjct: 399 --EIVVVNKADAADPEVLQRLLRNE------KYAIAVSARTGAGIDELLALI 442 >gi|157960866|ref|YP_001500900.1| GTP-binding protein Era [Shewanella pealeana ATCC 700345] gi|157845866|gb|ABV86365.1| GTP-binding protein Era [Shewanella pealeana ATCC 700345] Length = 330 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I + P TT + +GI +G ++ + D PG+ Sbjct: 39 VAIVGRPNVGKSTLLNKLLGQKISITSKKPQTTRHRIMGIHTDGPRQVVFIDTPGL 94 >gi|260905263|ref|ZP_05913585.1| GTP-binding protein EngA [Brevibacterium linens BL2] Length = 503 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 8/97 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKS+ L + + + D TT P +++ G K++ D GI + A Sbjct: 244 IALVGRPNVGKSSLLNQLIGSDRVLVDNVAGTTRDPVDELIELGDKQWRFVDTAGIRRRA 303 Query: 221 HQGAGIG-------DRFLKHTERTHVLLHIVSALEEN 250 HQ +G L+ E VLL + L E Sbjct: 304 HQASGADFYAALRTQTALERAELALVLLEVQEPLSEQ 340 >gi|10441752|gb|AAG17176.1|AF190730_1 GTPase ERA-W [Mus musculus] Length = 331 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Query: 159 IADIGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII 217 + + ++G PNAGKST + R ++ TT LG++ E + IL D PGII Sbjct: 7 VLRVVLLGAPNAGKSTLSNQLVGRKVFPVSKKVHTTRCQALGVITEKETQVILLDTPGII 66 Query: 218 KNAHQGAGIGDRFL 231 Q +R L Sbjct: 67 SPVKQKRHHLERSL 80 >gi|23099103|ref|NP_692569.1| GTP-binding protein protease modulator [Oceanobacillus iheyensis HTE831] gi|22777331|dbj|BAC13604.1| GTP-binding protein protease modulator [Oceanobacillus iheyensis HTE831] Length = 413 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 5/108 (4%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILADIPGIIKNA 220 I I+G NAGKST +T++ D F TL P VK ++ D G I++ Sbjct: 198 IAIVGYTNAGKSTLFNRLTKSSSLEEDQLFATLDPLTRRVKLPSDMICLITDTVGFIQDL 257 Query: 221 HQGA-GIGDRFLKHTERTHVLLHIVSALEENV---QAAYQCILDELSA 264 L+ LLH+V A + ++ Q Q +L+EL+A Sbjct: 258 PTALIAAFKSTLEEVAEADFLLHVVDASDSDLNQQQKTVQKLLEELNA 305 >gi|300898385|ref|ZP_07116728.1| ribosome-associated GTPase EngA [Escherichia coli MS 198-1] gi|300940238|ref|ZP_07154836.1| ribosome-associated GTPase EngA [Escherichia coli MS 21-1] gi|300357925|gb|EFJ73795.1| ribosome-associated GTPase EngA [Escherichia coli MS 198-1] gi|300454934|gb|EFK18427.1| ribosome-associated GTPase EngA [Escherichia coli MS 21-1] Length = 499 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 67 Query: 215 GIIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 68 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREK 120 Query: 273 IEIVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 121 PTFLVANKTDGLDPD 135 >gi|288941441|ref|YP_003443681.1| GTP-binding protein Era [Allochromatium vinosum DSM 180] gi|288896813|gb|ADC62649.1| GTP-binding protein Era [Allochromatium vinosum DSM 180] Length = 307 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 4/79 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPF-TTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST L + K I + TT + LGI + + D PGI Sbjct: 20 VAIIGRPNVGKSTLLNRILGQKLAITSHKAQTTRHAILGIKTRAGGQILFVDTPGI---H 76 Query: 221 HQGAGIGDRFLKHTERTHV 239 +G +R+L R V Sbjct: 77 ERGGSALNRYLNRAARAAV 95 >gi|168062875|ref|XP_001783402.1| predicted protein [Physcomitrella patens subsp. patens] gi|162665100|gb|EDQ51796.1| predicted protein [Physcomitrella patens subsp. patens] Length = 312 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 +G++G PNAGKST + +K ++ TT ++GI+ +G + I D PG+ Sbjct: 31 VGVVGSPNAGKSTLTNHLVGSKVSAVSRKTNTTHKEHMGILTKGDSQLIFFDTPGL 86 >gi|254302672|ref|ZP_04970030.1| GTP-binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322864|gb|EDK88114.1| GTP-binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 296 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 9/165 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST + + K I T N+ GI+ ++I D PGI K Sbjct: 6 IAVVGRPNVGKSTLINKLVSEKVAIVSDKAGTTRDNIKGILNFKDNQYIFIDTPGIHKPQ 65 Query: 221 H-QGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H G + + +K + ++L ++ A + + ++D + +E KK I+ ++ Sbjct: 66 HLLGEYMTNIAVKILKDVDIILFLIDA-SKPIGTGDMFVMDRI----NENSKKPRILLVN 120 Query: 280 QIDTVDSDTLARKKNELATQCGQV-PFEFSS-ITGHGIPQILECL 322 ++D + + K E+ + G+ F+S + GI Q+LE L Sbjct: 121 KVDLISDEQKEEKLKEIEEKLGKFDKIIFASGMYSFGISQLLEAL 165 >gi|157371903|ref|YP_001479892.1| GTP-binding protein Era [Serratia proteamaculans 568] gi|157323667|gb|ABV42764.1| GTP-binding protein Era [Serratia proteamaculans 568] Length = 302 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +GI +G + I D PG+ Sbjct: 11 IAIVGRPNVGKSTLLNQLLGQKVSITSRKPQTTRHRIMGIDTDGAYQAIYVDTPGL 66 >gi|330719333|ref|ZP_08313933.1| GTPase YqeH [Leuconostoc fallax KCTC 3537] Length = 379 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 9/90 (10%) Query: 155 KLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI------VKEGYKEF 208 +L+L D+ ++G+ N GKST + + +++ I + T+ +P + + +G + Sbjct: 174 ELRLGEDVYVVGVTNVGKSTLINRIIKSRTGIQELITTSRFPGTTLDRIEIPLDDGAQ-- 231 Query: 209 ILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 L D PGI+K + ++ LK H Sbjct: 232 -LVDTPGIVKRDQMAHALSEKDLKFALPNH 260 >gi|313905734|ref|ZP_07839094.1| GTP-binding proten HflX [Eubacterium cellulosolvens 6] gi|313469441|gb|EFR64783.1| GTP-binding proten HflX [Eubacterium cellulosolvens 6] Length = 411 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 7/112 (6%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + I+G NAGKST L ++T A D F TL P I+ G + +L D G I Sbjct: 198 IRQVAIVGYTNAGKSTLLNTMTNAGVLEEDALFATLDPTTRILDLPGGSQVLLTDTVGFI 257 Query: 218 -KNAHQGAGIGDRFLKHTERTHVLLHIVSA----LEENVQAAYQCILDELSA 264 K H L+ ++H+ A +E+ ++ Y+ L EL A Sbjct: 258 DKLPHALIDAFRSTLEEAAYADYIIHVADASNPRVEQQMEVVYET-LHELGA 308 >gi|309789730|ref|ZP_07684310.1| GTP-binding protein Era [Oscillochloris trichoides DG6] gi|308228216|gb|EFO81864.1| GTP-binding protein Era [Oscillochloris trichoides DG6] Length = 466 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 4/77 (5%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + ++G PN GKST L ++ K I + TT P GI+ + + D PGI + + Sbjct: 177 VALVGKPNVGKSTLLNTLLGQKVTIVSPRAQTTRVPVRGILSRPDAQVVFIDTPGIHQPS 236 Query: 221 HQGAGIGDRFLKHTERT 237 H+ +G ++ ERT Sbjct: 237 HK---LGKFMVELAERT 250 >gi|256829402|ref|YP_003158130.1| ferrous iron transport protein B [Desulfomicrobium baculatum DSM 4028] gi|256578578|gb|ACU89714.1| ferrous iron transport protein B [Desulfomicrobium baculatum DSM 4028] Length = 722 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 14/144 (9%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI- 216 +IA I + G PNAGK+T ++T ++ + +YP T+ G V + D+PG Sbjct: 5 VIATIALAGNPNAGKTTLFNALTGSRQHVGNYPGITVEKKEGYVDTPAGLTRVVDLPGTY 64 Query: 217 -IKNAHQGAGIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCI---LDELSAYNSELR 270 + Q + FL H ER +++++ A LE N+ Q + + A N + Sbjct: 65 SLTAYSQEELVARDFLIH-ERPQGVINVLDATSLERNLYLTVQFLEIGIPVTVALN--MV 121 Query: 271 KKIEIVGLSQIDTVDSDTLARKKN 294 +E G+ T+DS LA N Sbjct: 122 DALEAKGM----TIDSQRLASLMN 141 >gi|118772238|gb|ABL14106.1| FeoB [Magnetospirillum gryphiswaldense MSR-1] Length = 704 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 17/62 (27%), Positives = 32/62 (51%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAH 221 + ++G PNAG ++ ++T A+ +A+Y T N+ + G + D+PGI + Sbjct: 7 VALVGNPNAGSTSLFNALTGAQSAVANYQRVTTSLNVREITHGGVSLRIVDVPGIFSTSS 66 Query: 222 QG 223 Q Sbjct: 67 QS 68 >gi|156973384|ref|YP_001444291.1| GTP-binding protein EngA [Vibrio harveyi ATCC BAA-1116] gi|166225933|sp|A7MZE5|DER_VIBHB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|156524978|gb|ABU70064.1| hypothetical protein VIBHAR_01071 [Vibrio harveyi ATCC BAA-1116] Length = 498 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 14/167 (8%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYK-EFILADIPG 215 ++ + ++G PN GKST +TR + +AD+P T G + G + EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60 Query: 216 IIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 I +G + ++ L + V+L +V +A + ++A+ ++ K Sbjct: 61 -IDGTEEGVETKMAEQSLAAIDEADVVLFLVDG-----RAGLTPSDEAIAAHLRKIEKPA 114 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 +V +++ID +D+D +L ++ ++ G G+ +LE Sbjct: 115 MLV-VNKIDGIDADAACADFWQLGVDDM---YQIAAAHGRGVTALLE 157 Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 212 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRG 271 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK E +V+L ++ A E + L+A S ++ Sbjct: 272 RINETVEKFSVVKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRS------IVL 325 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D++ K EL + G V F S++ G G+ + E + + Sbjct: 326 AVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFISALHGTGVGHLFESIQE 377 >gi|283850147|ref|ZP_06367436.1| ferrous iron transport protein B [Desulfovibrio sp. FW1012B] gi|283574173|gb|EFC22144.1| ferrous iron transport protein B [Desulfovibrio sp. FW1012B] Length = 728 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 30/54 (55%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 + G PN GK+T ++T A+ +A+YP T+ G G ++ + D+PG+ Sbjct: 8 ALAGNPNCGKTTLFNALTGARQHVANYPGVTVEKREGRCHAGNRDLTVVDLPGM 61 >gi|262304271|gb|ACY44728.1| GTP-binding protein [Nicoletia meinerti] Length = 280 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 5/69 (7%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEEN----VQAAYQCILDELSAY 265 + DI G++K A +G G+G+ FL H + + H+ A E++ V+ + D L Sbjct: 35 VVDIAGLVKGASEGQGLGNAFLSHVKACDAVFHLCRAFEDDDVTHVEGEVNPVRD-LDII 93 Query: 266 NSELRKKIE 274 + ELR K E Sbjct: 94 SEELRLKDE 102 >gi|269836355|ref|YP_003318583.1| GTP-binding protein YchF [Sphaerobacter thermophilus DSM 20745] gi|269785618|gb|ACZ37761.1| GTP-binding protein YchF [Sphaerobacter thermophilus DSM 20745] Length = 368 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 18/103 (17%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF-ILA----------- 211 IIGLP +GK+T ++TR++ + PNL VK + +L Sbjct: 7 IIGLPQSGKTTVFNALTRSEAPTGVFSTGEEEPNLATVKVPDERLDVLTRMFNPRRTVPA 66 Query: 212 -----DIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 DI G+ K H+ G+ R L + + L+H+V A E+ Sbjct: 67 DVQYYDIAGLAKGIHE-QGMSGRLLGYLSQGAALVHVVRAFED 108 >gi|296129409|ref|YP_003636659.1| GTP-binding proten HflX [Cellulomonas flavigena DSM 20109] gi|296021224|gb|ADG74460.1| GTP-binding proten HflX [Cellulomonas flavigena DSM 20109] Length = 505 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 18/175 (10%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII 217 I + I G NAGKS+ L +T A + + F TL P + + + + LAD G + Sbjct: 283 IPSVAIAGYTNAGKSSLLNRLTHAGVLVENALFATLDPTVRRAEAADGRVYTLADTVGFV 342 Query: 218 KN-AHQGAGIGDRFLKHTERTHVLLHIVSAL----EENVQAAYQCILDELSAYNSELRKK 272 ++ HQ L+ ++LH+V A E + A D A + Sbjct: 343 RHLPHQLVEAFRSTLEEVADADLILHVVDAAHPDPEGQIAAVRHVFADIPGAMDVP---- 398 Query: 273 IEIVGLSQIDTVDSDTLAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 EI+ L++ D + +AR + E+ + S+ TG GI ++ + D++ Sbjct: 399 -EIIVLNKADLAAPEAVARLRSREVHS------IVVSAHTGEGIDELSALIADQL 446 >gi|227432225|ref|ZP_03914221.1| GTP-binding protein Era [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351998|gb|EEJ42228.1| GTP-binding protein Era [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 303 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 23/172 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST L + K I +D TT GI + + D PG+ K Sbjct: 11 VAIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDDAQVVFIDTPGVHKPQ 70 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAY------QCILDELSAYNSE----LR 270 + +GD +K LH A+ V AA I+D L + L Sbjct: 71 N---SLGDFMVKS---AFSALHEADAIWFVVDAAMARGRGDDFIIDRLQEVKNTPIYLLI 124 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 K++++ + + D +A +N+ A++ +V F S+ G +P++L+ + Sbjct: 125 NKVDLLAPNDL----LDVIASYQND-ASEWAEV-FPISATEGDNVPELLDNI 170 >gi|209542663|ref|YP_002274892.1| GTP-binding proten HflX [Gluconacetobacter diazotrophicus PAl 5] gi|209530340|gb|ACI50277.1| GTP-binding proten HflX [Gluconacetobacter diazotrophicus PAl 5] Length = 436 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 17/173 (9%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + ++G NAGKST ++T A D F TL P + GI + IL+D G I + Sbjct: 212 VALVGYTNAGKSTLFNALTGATVFAQDQLFATLDPTMRGIRLPSGRRIILSDTVGFISDL 271 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELS------AYNSELRKKI 273 R L+ V+LH+ + A + D L + R+++ Sbjct: 272 PTELIAAFRATLEEVAEADVILHVRDISHPDSAAQRADVEDVLEGMAGSGTLEDDWRRRV 331 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKI 326 I+ + L ++ + + G V S+ITG G+P +L + ++ Sbjct: 332 -------IEVQNKADLIGGRDAVPPRKGSVV--ISAITGEGLPDLLAAIDSRL 375 >gi|218960394|ref|YP_001740169.1| GTPase [Candidatus Cloacamonas acidaminovorans] gi|167729051|emb|CAO79962.1| GTPase [Candidatus Cloacamonas acidaminovorans] Length = 447 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 4/127 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGY-KEFILADIPGII-KN 219 I ++G NAGKST +T A + D F TL +K +L+D G I K Sbjct: 225 ICLVGYTNAGKSTLFNQLTNAGVLVEDKLFATLDSTSRQLKLSTGNPVVLSDTVGFISKL 284 Query: 220 AHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 H L + ++LLHIV +E + Q + L +E +I+ + Sbjct: 285 PHHLIASFKATLMEVQDANLLLHIVDVSDERFEYYIQQVNSVLQQIGAETIP--QILVFN 342 Query: 280 QIDTVDS 286 +ID VDS Sbjct: 343 KIDNVDS 349 >gi|153833535|ref|ZP_01986202.1| GTP-binding protein EngA [Vibrio harveyi HY01] gi|148870186|gb|EDL69127.1| GTP-binding protein EngA [Vibrio harveyi HY01] Length = 498 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 14/167 (8%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYK-EFILADIPG 215 ++ + ++G PN GKST +TR + +AD+P T G + G + EFI+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60 Query: 216 IIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI 273 I +G + ++ L + V+L +V +A + ++A+ ++ K Sbjct: 61 -IDGTEEGVETKMAEQSLAAIDEADVVLFLVDG-----RAGLTPSDEAIAAHLRKIEKPA 114 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 +V +++ID +D+D +L ++ ++ G G+ +LE Sbjct: 115 MLV-VNKIDGIDADAACADFWQLGVDDM---YQIAAAHGRGVTALLE 157 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 15/172 (8%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + IIG PN GKST + + + D P TT ++ +E++L D G+ + Sbjct: 212 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRG 271 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + + LK E +V+L ++ A E + L+A S ++ Sbjct: 272 RINETVEKFSVVKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRS------IVL 325 Query: 277 GLSQIDTVDSDTLARKKNELATQCGQVPFE----FSSITGHGIPQILECLHD 324 +++ D +D++ K EL + G V F S++ G G+ + E + + Sbjct: 326 AVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFISALHGTGVGHLFESIQE 377 >gi|23014919|ref|ZP_00054713.1| COG0370: Fe2+ transport system protein B [Magnetospirillum magnetotacticum MS-1] Length = 704 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 21/174 (12%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG 215 +K + ++G PNAG ++ ++T A+ +A+Y T N+ + G + D+PG Sbjct: 1 MKSPVTVALVGNPNAGSTSLFNALTGAQSAVANYQRVTTSLNVREITHGGVPLRIVDVPG 60 Query: 216 IIKNAHQGA--GIGDRFLKHTERTHVLLHIVSA--LEENVQAAYQCI---LDELSAYNSE 268 I + Q +G ++ H E ++++++ A L+ ++ Q I L ++ N Sbjct: 61 IFSTSSQSPEEKVGCDYI-HGEEPDIIVNVLDAGHLDRSLFLTTQLIETGLPRITVLN-- 117 Query: 269 LRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECL 322 + ++ G+ +IDTV LA+ G E ++ GI +L+ + Sbjct: 118 MMDEVRRAGI-RIDTV----------LLASALGSPVVETCALKKEGIDALLDAV 160 >gi|328871730|gb|EGG20100.1| guanine nucleotide binding protein 3 [Dictyostelium fasciculatum] Length = 607 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Query: 154 LKLKLIADIGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGYKEFILAD 212 L +K +GIIG PN GKS+ + S+ RA+ +A+ P T + + + K L D Sbjct: 252 LNMKTSISVGIIGYPNVGKSSLINSLKRARSVSVANTPGHTKVAQVVNLDKNVK---LID 308 Query: 213 IPGII 217 PGI+ Sbjct: 309 SPGIV 313 >gi|331703462|ref|YP_004400149.1| GTP binding protein Era [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802017|emb|CBW54171.1| GTP binding protein Era homolog [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 301 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 21/171 (12%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIV-KEGYKEFILADIPGIIKN 219 + IIG PN GKST L + K I + P TT GI+ K+ + + D PG+ Sbjct: 9 VSIIGRPNVGKSTLLNKLIGEKISIVTNKPQTTRNNIRGILTKKDQYQIVFIDTPGV--- 65 Query: 220 AHQGAGIGDRF-----LKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 H D+F LK T+ V+L + + +E + +L ++ + + Sbjct: 66 -HTSKKQLDKFLNTSALKSTKDVDVILFLAPS-DEAIGKNDLFLLKQIKNLDV-----FK 118 Query: 275 IVGLSQIDTVDSDTLARKKNELAT---QCGQVPFEFSSITGHGIPQILECL 322 I+ +++ D V + L K NE ++ Q ++ SSI I ++LE + Sbjct: 119 ILVITKADNVTKEQLILKANEWSSFQDQFDEIIIT-SSIINLNIEKLLELI 168 >gi|239947026|ref|ZP_04698779.1| ribosome-associated GTPase EngA [Rickettsia endosymbiont of Ixodes scapularis] gi|239921302|gb|EER21326.1| ribosome-associated GTPase EngA [Rickettsia endosymbiont of Ixodes scapularis] Length = 447 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%) Query: 162 IGIIGLPNAGKSTFLASV-TRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I ++G PN GKST + TR K + D P T K G EF+L D PG+ +N Sbjct: 6 ITLVGRPNVGKSTLFNRLSTRKKAIVHDLPGVTRDRKYTEGKIGSFEFLLIDTPGLEENP 65 Query: 221 HQGAGIGDRFLKHTER 236 +G++ ++ T + Sbjct: 66 D---SMGEKLMEQTTK 78 >gi|224097032|ref|XP_002310817.1| predicted protein [Populus trichocarpa] gi|222853720|gb|EEE91267.1| predicted protein [Populus trichocarpa] Length = 414 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGII-KN 219 + ++G PN GKST + K I D P TT + LGI + IL D PG+I K Sbjct: 119 VAVVGKPNVGKSTLSNQMIGQKLSIVTDKPQTTRHRILGICSAPDYQMILYDTPGVIEKK 178 Query: 220 AHQ 222 H+ Sbjct: 179 MHK 181 >gi|168204855|ref|ZP_02630860.1| GTP binding protein [Clostridium perfringens E str. JGS1987] gi|170663538|gb|EDT16221.1| GTP binding protein [Clostridium perfringens E str. JGS1987] Length = 597 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 21/142 (14%) Query: 160 ADIGIIGLPNAGKSTFLASV---------TRAKPKI--ADYPFTTLYPNLGIVK-EGYKE 207 + + ++G NAGKST ++ T+AK K+ AD F TL +K ++ Sbjct: 364 SQVSLVGYTNAGKSTLRNTLCAESASTLATQAKDKVFEADMLFATLDTTTRAIKLPDNRD 423 Query: 208 FILADIPGII-KNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQA---AYQCILDELS 263 L D G + K H+ L+ + +L H+V A +N Q A + +L EL Sbjct: 424 ITLTDTVGFVSKLPHELVEAFKSTLEEVIYSDLLCHVVDASSDNAQEEIIAVEKVLGELK 483 Query: 264 AYNSELRKKIEIVGLSQIDTVD 285 A S +I+ L++ID D Sbjct: 484 ALESA-----KILVLNKIDKAD 500 >gi|322834126|ref|YP_004214153.1| GTP-binding protein Era [Rahnella sp. Y9602] gi|321169327|gb|ADW75026.1| GTP-binding protein Era [Rahnella sp. Y9602] Length = 301 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 + I+G PN GKST L + K I P TT + +GI EG + I D PG+ Sbjct: 11 VAIVGRPNVGKSTLLNELLGQKISITSRKPQTTRHRIMGIHTEGPYQAIYVDTPGL 66 >gi|302754754|ref|XP_002960801.1| hypothetical protein SELMODRAFT_75698 [Selaginella moellendorffii] gi|300171740|gb|EFJ38340.1| hypothetical protein SELMODRAFT_75698 [Selaginella moellendorffii] Length = 330 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGII-KN 219 + +IG PN GKST L + K I P TT + LGI + IL D PG+I K Sbjct: 32 VALIGKPNVGKSTLLNGIIGQKLSIVTAKPQTTRHRILGICSGPNYQMILYDTPGVITKQ 91 Query: 220 AHQ 222 H+ Sbjct: 92 MHK 94 >gi|302804232|ref|XP_002983868.1| hypothetical protein SELMODRAFT_119375 [Selaginella moellendorffii] gi|300148220|gb|EFJ14880.1| hypothetical protein SELMODRAFT_119375 [Selaginella moellendorffii] Length = 330 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIAD-YPFTTLYPNLGIVKEGYKEFILADIPGII-KN 219 + +IG PN GKST L + K I P TT + LGI + IL D PG+I K Sbjct: 32 VALIGKPNVGKSTLLNGIIGQKLSIVTAKPQTTRHRILGICSGPNYQMILYDTPGVITKQ 91 Query: 220 AHQ 222 H+ Sbjct: 92 MHK 94 >gi|297160580|gb|ADI10292.1| GTP-binding protein Era [Streptomyces bingchenggensis BCW-1] Length = 318 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 11/150 (7%) Query: 165 IGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 +G PNAGKST ++ K I ++ P TT + GIV + +L D PG+ K Sbjct: 25 VGRPNAGKSTLTNALVGTKVAITSNRPQTTRHTVRGIVHRPDAQLVLVDTPGLHKPR--- 81 Query: 224 AGIGDRFLKHTERTHVLLHIVS---ALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQ 280 +G+R T + ++ ++ + + I EL+ ++K +I +++ Sbjct: 82 TLLGERLNDVVRTTWAEVDVIGFCLPADQKLGPGDRFIAGELAG----IKKTPKIAIVTK 137 Query: 281 IDTVDSDTLARKKNELATQCGQVPFEFSSI 310 D VDS LA + + ++ FE++ I Sbjct: 138 TDLVDSQQLAEQLIAVDRLGKELGFEWAEI 167 >gi|312139394|ref|YP_004006730.1| gtpase [Rhodococcus equi 103S] gi|325672725|ref|ZP_08152421.1| GTP-binding protein [Rhodococcus equi ATCC 33707] gi|311888733|emb|CBH48045.1| GTPase [Rhodococcus equi 103S] gi|325556602|gb|EGD26268.1| GTP-binding protein [Rhodococcus equi ATCC 33707] Length = 492 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 21/170 (12%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK-EGYKEFILADIPGII 217 I + I+G NAGKS+ L ++T + + + F TL P E +E++L D G + Sbjct: 267 IPSVAIVGYTNAGKSSLLNALTGSGVLVQNALFATLDPTTRQASFEDGREYVLTDTVGFV 326 Query: 218 KNAHQGAGIGDRF---LKHTERTHVLLHIVSALE----ENVQAAYQCILDELSAYNSELR 270 + H + + F L+ +LLH+V + + ++A + + + + ++ Sbjct: 327 R--HLPTQLVEAFRSTLEEVTDADLLLHVVDGSDPLPTDQIKAVREVVTEVIRENDTT-- 382 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNELATQCGQVP--FEFSSITGHGIPQI 318 E++ +++ID D L + + G +P S+ TG GI ++ Sbjct: 383 APPELIVVNKIDAADPVVLTQLR-------GLLPGAVFVSARTGEGIDEL 425 >gi|316936109|ref|YP_004111091.1| ferrous iron transport protein B [Rhodopseudomonas palustris DX-1] gi|315603823|gb|ADU46358.1| ferrous iron transport protein B [Rhodopseudomonas palustris DX-1] Length = 626 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 28/132 (21%), Positives = 62/132 (46%), Gaps = 19/132 (14%) Query: 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGI-VKEGYKEFILADIPG---- 215 ++ ++G PN+GK++ ++T ++ K+A+YP T+ G+ G + L D+PG Sbjct: 10 NLALVGTPNSGKTSLFNALTGSRQKVANYPGVTVERKTGLFTTPGGRVVSLVDLPGTYSL 69 Query: 216 ------------IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELS 263 ++ G + D L + T++ L LE ++A + ++ L+ Sbjct: 70 RGRSPDEEITRDVVLGRKPGETVPDLVLCVADSTNLRLTFRLMLE--LKATGRPLMLVLN 127 Query: 264 AYNSELRKKIEI 275 Y+ +R+ + + Sbjct: 128 MYDIAMRRGVTV 139 >gi|325496456|gb|EGC94315.1| putative GTP-binding factor [Escherichia fergusonii ECD227] Length = 499 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 10/135 (7%) Query: 156 LKLIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIP 214 L ++ + ++G PN GKST +TR + +AD+P T G + +EFI D Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTG 67 Query: 215 GIIKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKK 272 G I G + ++ L E V+L +V A + A DE A + R+K Sbjct: 68 G-IDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIAKHLRSREK 120 Query: 273 IEIVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 121 PTFLVANKTDGLDPD 135 >gi|320335172|ref|YP_004171883.1| GTP-binding proten HflX [Deinococcus maricopensis DSM 21211] gi|319756461|gb|ADV68218.1| GTP-binding proten HflX [Deinococcus maricopensis DSM 21211] Length = 562 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 62/146 (42%), Gaps = 17/146 (11%) Query: 162 IGIIGLPNAGKSTFLASVTRA--KPK---IADYPFTTLYPN--LGIVKEGYKEFILADIP 214 I I+G NAGKST L + T A +P+ + F TL P G + G + D Sbjct: 372 ISIVGYTNAGKSTLLNAFTHAAEEPRRVLAENKLFATLRPTSRQGFLP-GVGPVVFTDTV 430 Query: 215 GIIKNAHQGAGIGDR-FLKHTERTHVLLHIVSALE---ENVQAAYQCILDELSAYNSELR 270 G I++ R L+ VLLH+V A + A IL EL E+ Sbjct: 431 GFIRDLPTDLTRAFRSTLEEIGDADVLLHVVDAATPGADTRHDAVTRILQEL-----EVA 485 Query: 271 KKIEIVGLSQIDTVDSDTLARKKNEL 296 +V L++ D D D LAR+ L Sbjct: 486 DLPTVVALNKADAADPDLLAREMERL 511 >gi|317180293|dbj|BAJ58079.1| GTP-binding protein Era [Helicobacter pylori F32] Length = 301 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 25/173 (14%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV-----KEGYK-EFILADIPG 215 + +IG PNAGKST L ++ A + + + + KEGY+ + I D PG Sbjct: 8 VALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPG 67 Query: 216 IIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNS--ELRKKI 273 + HQ ++ L + L + A + + D+L Y L +K Sbjct: 68 L---HHQ-----EKLLNQCMFSQALKAMGDA---ELCVFLASVHDDLKGYEEFLSLCQKP 116 Query: 274 EIVGLSQIDTVDSDTLARKKNELATQCGQ----VPFEFSSITGHGIPQILECL 322 I+ +S+IDT + +K E Q VP S+ + +LEC+ Sbjct: 117 HILAVSKIDTATHKQVLQKLQEYQQYASQFLALVP--LSAKKSQNLNTLLECI 167 >gi|291543597|emb|CBL16706.1| ribosome-associated GTPase EngA [Ruminococcus sp. 18P13] Length = 442 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 17/173 (9%) Query: 162 IGIIGLPNAGKSTFLASVT-RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 + +IG PNAGKS+ + + + ++D TT +V+ +F+ D GI K + Sbjct: 180 VAVIGKPNAGKSSLINKIAGEERVIVSDIAGTTRDATDTVVENEQGKFVFIDTAGIRKKS 239 Query: 221 HQGAGIGD----RFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV 276 + R +R V + ++ A Q + +++ Y E + K I+ Sbjct: 240 RITERVEHFSVLRAYMAVDRADVCIIMIDA-----QTGFTEQDSKVAGYAHE-QGKASII 293 Query: 277 GLSQIDTVDSDTLARKKNELATQ-----CGQVPFEF-SSITGHGIPQILECLH 323 +++ D ++ DT K+ + + VPF F S+ TG + ++ E +H Sbjct: 294 AVNKWDLIEKDTNTMKEFQEKLEKDFSFMSYVPFVFISAKTGQRVNKLFEMIH 346 >gi|257223033|gb|ACV52787.1| GTP-binding protein [Oryza barthii] Length = 301 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 19/121 (15%) Query: 162 IGIIGLPNAGK-STFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGII--- 217 +G +G PN GK ST A V K + P T + I+ E E L D PG++ Sbjct: 95 VGFVGYPNVGKSSTINALVGEKKTGVTHTPGKTKHFQTLIISE---ELTLCDCPGLVFPS 151 Query: 218 --KNAHQGAGIG----DRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSEL 269 + H+ G DR KH E V+ V S LE+ Y+ L + Y S+ Sbjct: 152 FSSSRHEMVSCGVLPIDRMTKHREAIQVVADRVPRSVLEQ----IYKITLPKPKPYESQS 207 Query: 270 R 270 R Sbjct: 208 R 208 >gi|253997717|ref|YP_003049780.1| GTP-binding proten HflX [Methylovorus sp. SIP3-4] gi|253984396|gb|ACT49253.1| GTP-binding proten HflX [Methylovorus sp. SIP3-4] Length = 444 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 2/90 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 + + ++G NAGKST + ++T ++ +A+ F TL + + E +++D G I Sbjct: 219 LTSVALVGYTNAGKSTLMRALTGSEVLVANKLFATLDTTVRTLYPESVPRVLVSDTVGFI 278 Query: 218 KNAHQG-AGIGDRFLKHTERTHVLLHIVSA 246 KN G L +LLH++ A Sbjct: 279 KNLPHGLVASFKSTLDEALDAALLLHVIDA 308 >gi|300771272|ref|ZP_07081148.1| FeoB family ferrous iron (Fe2+) uptake protein [Sphingobacterium spiritivorum ATCC 33861] gi|300761942|gb|EFK58762.1| FeoB family ferrous iron (Fe2+) uptake protein [Sphingobacterium spiritivorum ATCC 33861] Length = 693 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 15/98 (15%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPG------ 215 I ++G PN GK++ +T+ K+ +YP T+ G V + + + D+PG Sbjct: 6 IALLGNPNVGKTSLFNKITKLHQKVGNYPGITVEKREGTVSYANQTYRVIDLPGTYTLFP 65 Query: 216 -------IIKNAH--QGAGIGDRFLKHTERTHVLLHIV 244 + H QG+ D + +E TH+ IV Sbjct: 66 NSLDEEIVFNTLHNKQGSNFPDLVVVVSEPTHLKRSIV 103 >gi|145220317|ref|YP_001131026.1| GTP-binding protein Era [Prosthecochloris vibrioformis DSM 265] gi|145206481|gb|ABP37524.1| GTP-binding protein Era [Chlorobium phaeovibrioides DSM 265] Length = 308 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 163 GIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGIIK 218 IIG PNAGKST L ++ K I + P TT GI + + I D PGI++ Sbjct: 15 SIIGPPNAGKSTLLNALLDCKLSIVTHKPQTTRKKITGIYSDDSTQIIFLDTPGIME 71 >gi|298249597|ref|ZP_06973401.1| GTP-binding proten HflX [Ktedonobacter racemifer DSM 44963] gi|297547601|gb|EFH81468.1| GTP-binding proten HflX [Ktedonobacter racemifer DSM 44963] Length = 438 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 4/123 (3%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKNA 220 + +IG NAGKST ++T A + + F TL P + +E +L D G I+ Sbjct: 215 VAVIGYTNAGKSTLFNALTDANALVENKLFATLDPTTRQLTLPNNQEALLTDTVGFIQKL 274 Query: 221 HQGAGIGDR-FLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 R L+ +LL +V N+ ++ +L L ++E + I L+ Sbjct: 275 PTDLVAAFRATLEEVTDADILLEVVDISHPNMHEQHEEVLRTLKDLHAEHLPR--ITALN 332 Query: 280 QID 282 +ID Sbjct: 333 KID 335 >gi|283786127|ref|YP_003365992.1| GTP-binding protein [Citrobacter rodentium ICC168] gi|282949581|emb|CBG89199.1| GTP-binding protein [Citrobacter rodentium ICC168] Length = 490 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 10/133 (7%) Query: 158 LIADIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 ++ + ++G PN GKST +TR + +AD+P T G + +EFI D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGG- 59 Query: 217 IKNAHQG--AGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE 274 I +G + ++ L E V+L +V A + A DE A + R+K Sbjct: 60 IDGTEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPA------DEAIARHLRSREKPT 113 Query: 275 IVGLSQIDTVDSD 287 + ++ D +D D Sbjct: 114 FLVANKTDGLDPD 126 >gi|157814196|gb|ABV81843.1| putative GTP-binding protein [Forficula auricularia] Length = 280 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 14/40 (35%), Positives = 24/40 (60%) Query: 210 LADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEE 249 + DI G++K A +G G+G+ FL H + + H+ A E+ Sbjct: 35 VVDIAGLVKGASEGQGLGNEFLSHIKACDAIFHLCRAFED 74 >gi|28199177|ref|NP_779491.1| GTP-binding protein Era [Xylella fastidiosa Temecula1] gi|182681908|ref|YP_001830068.1| GTP-binding protein Era [Xylella fastidiosa M23] gi|32129517|sp|Q87C05|ERA_XYLFT RecName: Full=GTPase Era gi|226741405|sp|B2I605|ERA_XYLF2 RecName: Full=GTPase Era gi|28057283|gb|AAO29140.1| GTP binding protein [Xylella fastidiosa Temecula1] gi|182632018|gb|ACB92794.1| GTP-binding protein Era [Xylella fastidiosa M23] gi|307578163|gb|ADN62132.1| GTP-binding protein Era [Xylella fastidiosa subsp. fastidiosa GB514] Length = 298 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 15/108 (13%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNA 220 I +IG PN GKST ++ K I ++ P TT + LGI + IL D PG+ + Sbjct: 12 IAVIGRPNVGKSTLTNALVGTKISIVSNRPQTTRHRLLGIATFPEGQIILVDTPGLHREQ 71 Query: 221 HQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSE 268 +R + T R + E+V AA ++ E + +N E Sbjct: 72 KHPM---NRLMNRTARGSL---------EDVDAA--LLVTESTHWNEE 105 >gi|313199781|ref|YP_004038439.1| GTP-binding proten hflx [Methylovorus sp. MP688] gi|312439097|gb|ADQ83203.1| GTP-binding proten HflX [Methylovorus sp. MP688] Length = 444 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 2/90 (2%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGII 217 + + ++G NAGKST + ++T ++ +A+ F TL + + E +++D G I Sbjct: 219 LTSVALVGYTNAGKSTLMRALTGSEVLVANKLFATLDTTVRTLYPESVPRVLVSDTVGFI 278 Query: 218 KNAHQG-AGIGDRFLKHTERTHVLLHIVSA 246 KN G L +LLH++ A Sbjct: 279 KNLPHGLVASFKSTLDEALDAALLLHVIDA 308 >gi|300858660|ref|YP_003783643.1| GTPase [Corynebacterium pseudotuberculosis FRC41] gi|300686114|gb|ADK29036.1| GTPase [Corynebacterium pseudotuberculosis FRC41] gi|302206368|gb|ADL10710.1| Putative GTP-binding protein hflX [Corynebacterium pseudotuberculosis C231] gi|302330924|gb|ADL21118.1| Putative GTP-binding protein hflX [Corynebacterium pseudotuberculosis 1002] gi|308276610|gb|ADO26509.1| Putative GTP-binding protein hflX [Corynebacterium pseudotuberculosis I19] Length = 546 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 19/169 (11%) Query: 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL--GIVKEGYKEFILADIPGI 216 I I I G NAGKS+ + ++T A + D F TL P + +G + + D G Sbjct: 320 IPQIAIAGYTNAGKSSLINALTDAGVLVEDALFATLDPTTRRAELADG-RSVVFTDTVGF 378 Query: 217 IKNAHQGAGIGDRFLKHTERT---HVLLHIVSALE----ENVQAAYQCILDELSAYNSEL 269 ++ H + + F E ++LH+V + E ++A I D + E Sbjct: 379 VR--HLPTQLVEAFRSTLEEVVGADLVLHVVDGSDPFPLEQIKAVNGVISDIVRELKVE- 435 Query: 270 RKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 EI+ +++ID D LA EL V F S+ G GIP++ Sbjct: 436 -APPEIIVVNKIDQADPLVLA----ELRHALDDVVF-VSAQEGDGIPEL 478 >gi|119386828|ref|YP_917883.1| small GTP-binding protein [Paracoccus denitrificans PD1222] gi|119377423|gb|ABL72187.1| GTP-binding protein HflX [Paracoccus denitrificans PD1222] Length = 435 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 13/177 (7%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGYKEFILADIPGIIKN- 219 + ++G NAGKST +T A+ D F TL P + + G + IL+D G I + Sbjct: 213 VALVGYTNAGKSTLFNRLTGAEVLAQDQLFATLDPTMRQLTLPGGRRVILSDTVGFISDL 272 Query: 220 AHQGAGIGDRFLKHTERTHVLLHI--VSALEENVQAA-YQCILDELSAYNSELRKKIEIV 276 H+ L+ ++LH+ +S E QA ILD L E IE+ Sbjct: 273 PHELVAAFRATLEEVLAADLILHVRDISHPETEEQAGDVGEILDSLGV--EEDVPLIEV- 329 Query: 277 GLSQIDTVDSDTLAR-KKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIRGE 332 ++ID + +T A ++ + TQ Q S+++G G+ +L + ++ + E Sbjct: 330 -WNKIDALSPETRAALQRTDARTQGVQA---ISALSGEGLDTLLAAIEARLAEVLDE 382 >gi|313140093|ref|ZP_07802286.1| GTP-binding protein Era [Bifidobacterium bifidum NCIMB 41171] gi|313132603|gb|EFR50220.1| GTP-binding protein Era [Bifidobacterium bifidum NCIMB 41171] Length = 344 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIA-DYPFTTLYPNLGIVKEGYKEFILADIPGI 216 I ++G PN GKST + ++ + IA P TT GI+ + + +L D PGI Sbjct: 39 IAVVGRPNVGKSTLINALIGKQVAIASSRPETTRKAIRGILTTDHAQLVLVDTPGI 94 >gi|229163811|ref|ZP_04291754.1| Ferrous iron transport protein B [Bacillus cereus R309803] gi|228619631|gb|EEK76514.1| Ferrous iron transport protein B [Bacillus cereus R309803] Length = 657 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 17/165 (10%) Query: 164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI--IKNAH 221 ++G PN GK++ ++T + + ++ T+ +G +K+ K+ L D+PG+ + Sbjct: 1 MLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGKLKD--KQGTLIDLPGVYDLNPVS 58 Query: 222 QGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGLS 279 + G+ FL E H +L+IV S E N+ Q + E K I I GL+ Sbjct: 59 RDEGVVTNFLLTEEFNH-MLNIVDSSQFERNMHLTLQLL---------EFGKPISI-GLN 107 Query: 280 QIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD 324 +D + L+ G + +G G ++L L + Sbjct: 108 MVDVAKQRGIVIDVKRLSELLGVTVVPVVARSGKGCEELLTTLKE 152 >gi|218134734|ref|ZP_03463538.1| hypothetical protein BACPEC_02637 [Bacteroides pectinophilus ATCC 43243] gi|217990119|gb|EEC56130.1| hypothetical protein BACPEC_02637 [Bacteroides pectinophilus ATCC 43243] Length = 798 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 14/162 (8%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NA 220 I + G PN GK+T ++T + + ++P T+ G +K G+K+ + D+PGI + Sbjct: 5 IALAGNPNCGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLK-GHKDVTITDLPGIYSLSP 63 Query: 221 HQGAGIGDRFLKHTERTHVLLHIV--SALEENVQAAYQCILDELSAYNSELRKKIEIVGL 278 + + R E+ +++IV + +E N+ + Q + EL + I+ + Sbjct: 64 YTLEEVVARNYLINEKPDAIINIVDGTNIERNLYLSTQIM---------ELGIPV-IMAV 113 Query: 279 SQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILE 320 + D + + + +L+ G E S++ G GI + E Sbjct: 114 NMTDLLAKNGIELNTAKLSENLGCEVVEISALKGTGIREAAE 155 >gi|27364935|ref|NP_760463.1| GTPase Era [Vibrio vulnificus CMCP6] gi|37681014|ref|NP_935623.1| GTP-binding protein Era [Vibrio vulnificus YJ016] gi|320155321|ref|YP_004187700.1| GTP-binding protein Era [Vibrio vulnificus MO6-24/O] gi|31340056|sp|Q8DC75|ERA_VIBVU RecName: Full=GTPase Era gi|61212428|sp|Q7MHN9|ERA_VIBVY RecName: Full=GTPase Era gi|27361081|gb|AAO09990.1| GTP-binding protein Era [Vibrio vulnificus CMCP6] gi|37199764|dbj|BAC95594.1| GTP-binding protein Era [Vibrio vulnificus YJ016] gi|319930633|gb|ADV85497.1| GTP-binding protein Era [Vibrio vulnificus MO6-24/O] Length = 320 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 162 IGIIGLPNAGKSTFLASVTRAKPKIADY-PFTTLYPNLGIVKEGYKEFILADIPGI 216 I I+G PN GKST L + K I P TT + +G+ +G + I D PG+ Sbjct: 29 IAIVGRPNVGKSTLLNKILGQKISITSRKPQTTRHRIMGVDTDGDYQAIYVDT