HHsearch alignment for GI: 254780649 and conserved domain: COG1057
>COG1057 NadD Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism].
Probab=100.00 E-value=0 Score=342.73 Aligned_cols=178 Identities=28% Similarity=0.458 Sum_probs=159.0
Q ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC-CCCCCCCHHHHHH
Q ss_conf 987899827789713389999999999862998899997589987555668899999999863104-7532134255310
Q gi|254780649|r 18 PGMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIK-NPRIRITAFEAYL 96 (216)
Q Consensus 18 ~~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~-~~~i~v~~~E~~~ 96 (216)
T Consensus 1 ~~~~i~lfGGsFdP~H~GHl~ia~~~~~~l~ld~vi~~ps~~~p~k~~~~~a~~~~R~~Ml~la~~~~~~~~v~~~e~~r 80 (197)
T COG1057 1 KMKKIALFGGSFDPPHYGHLLIAEEALDQLGLDKVIFLPSPVPPHKKKKELASAEHRLAMLELAIEDNPRFEVSDREIKR 80 (197)
T ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHC
T ss_conf 98469996138999878999999999987498879994489897777666799999999999998259976131999975
Q ss_pred H-HHHHHHHHHHHH-CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHH
Q ss_conf 0-032899999972-01367843896168813577777619999975898999389987143215899998632588123
Q gi|254780649|r 97 N-HTETFHTILQVK-KHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESL 174 (216)
Q Consensus 97 ~-~syT~dtL~~lk-~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~ 174 (216)
T Consensus 81 ~g~sYT~dTl~~~~~~~~p~~~~~fIiGaD~l~~l~~W~~~~ell~~~~~vv~~Rp~~~--~~----~~~~~-------- 146 (197)
T COG1057 81 GGPSYTIDTLEHLRQEYGPDVELYFIIGADNLASLPKWYDWDELLKLVTFVVAPRPGYG--EL----ELSLL-------- 146 (197)
T ss_pred CCCCEEHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCEEEEECCCCH--HH----HHHHH--------
T ss_conf 79966099999999985899858999704775043513459999973979999567740--43----04443--------
Q ss_pred HHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 34542058980999807468868899999998796851116
Q gi|254780649|r 175 SHILCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTLG 215 (216)
Q Consensus 175 ~~~~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L~ 215 (216)
T Consensus 147 ------~~~~~~~~~~~~~~~ISSt~IR~~~~~~~~~~~ll 181 (197)
T COG1057 147 ------SSGGAIILLDLPRLDISSTEIRERIRRGASVDYLL 181 (197)
T ss_pred ------CCCCEEEECCCCCCCCCHHHHHHHHHCCCCCHHCC
T ss_conf ------36862897258644474699999985799703018