HHsearch alignment for GI: 254780649 and conserved domain: PRK08887

>PRK08887 nicotinic acid mononucleotide adenylyltransferase; Provisional.
Probab=100.00  E-value=0  Score=294.68  Aligned_cols=148  Identities=20%  Similarity=0.345  Sum_probs=129.9

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC---CCCCCCCHHHHHH
Q ss_conf             7899827789713389999999999862998899997589987555668899999999863104---7532134255310
Q gi|254780649|r   20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIK---NPRIRITAFEAYL   96 (216)
Q Consensus        20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~---~~~i~v~~~E~~~   96 (216)
T Consensus         2 kkIgifGGSFDP~H~GHl~i~~~l~---~lD~v~~iP~~~~~~~k--~~~~~~~R~~M~~~ai~~~~~~~~~~~~iE~~~   76 (173)
T PRK08887          2 KKIAVFGSAFNPPSLGHKSVIESLS---HFDLVLLVPSIAHAWGK--EMLDYDTRCELVDAFIKDLGLSNVQRSDLEQEL   76 (173)
T ss_pred             CEEEEEEECCCCCCHHHHHHHHHHH---CCCEEEEEECCCCCCCC--CCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHC
T ss_conf             4899974288986698999999987---58989999789885456--789999999999999975588871775677543


Q ss_pred             ---HHH-HHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCH
Q ss_conf             ---003-2899999972013678438961688135777776199999758989993899871432158999986325881
Q gi|254780649|r   97 ---NHT-ETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDE  172 (216)
Q Consensus        97 ---~~s-yT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~  172 (216)
T Consensus        77 ~~p~~s~~T~~tl~~l~~~yp~~~~~~IiG~D~~~~~~~W~~~eeIl~~~~il~~p~-----------------------  133 (173)
T PRK08887         77 YQPGESVTTYALLTRLQEIYPEADITFVIGPDNFLKFAKFYKADEITQRWSVMACPE-----------------------  133 (173)
T ss_pred             CCCCCCEEHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCHHHHHHHCEEEECCC-----------------------
T ss_conf             489974778999999999789980899986787765677569899987381986888-----------------------


Q ss_pred             HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf             2334542058980999807468868899999998796851116
Q gi|254780649|r  173 SLSHILCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTLG  215 (216)
Q Consensus       173 ~~~~~~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L~  215 (216)
T Consensus       134 --------------------~~~ISST~IR~~i~~g~~i~~lv  156 (173)
T PRK08887        134 --------------------TVPIRSTDIRNAIVNGSDISHLT  156 (173)
T ss_pred             --------------------CCCCCHHHHHHHHHCCCCCHHHC
T ss_conf             --------------------88758899999998599922539