HHsearch alignment for GI: 254780649 and conserved domain: cd02039
>cd02039 cytidylyltransferase_like Cytidylyltransferase-like domain.Many ofthese proteins are known to use CTP or ATP and release pyrophosphate. Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown.
Probab=99.93 E-value=2e-25 Score=166.98 Aligned_cols=125 Identities=21% Similarity=0.266 Sum_probs=105.4
Q ss_pred EEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH-HHHHH
Q ss_conf 98277897133899999999998629988999975899875556688999999998631047532134255310-00328
Q gi|254780649|r 23 GLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKNPRIRITAFEAYL-NHTET 101 (216)
Q Consensus 23 gifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~~~i~v~~~E~~~-~~syT 101 (216)
T Consensus 1 vi~~G~FDp~H~GH~~li~~a~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~R~~~l~~~~~~--~~v~~~~~~~~~~~~~ 77 (141)
T cd02039 1 VLAGGSFDPVHLGHLALIERAKELA-LDELIVGVFSDPPKKVPKPLFSLEERLEMLEAAGKV--DEVVVLEFDRFSWSYT 77 (141)
T ss_pred CEECCCCCCCCHHHHHHHHHHHHHC-CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCC--CEEEEEHHHCCCCCCH
T ss_conf 9894464876799999999999978-996179974898433588889999999999974898--6698513313377889
Q ss_pred HHHHHHHHCCCCCCCEEEECCCCCHHHHHHHH--HHHHHHHHCCEEEEECCCC
Q ss_conf 99999972013678438961688135777776--1999997589899938998
Q gi|254780649|r 102 FHTILQVKKHNKSVNFVWIMGADNIKSFHQWH--HWKRIVTTVPIAIIDRFDV 152 (216)
Q Consensus 102 ~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~--~~~~ll~~~~iiV~~R~g~ 152 (216)
T Consensus 78 ~~~~~~~~~~~~--~~~ivvG~D~~~g~~~~~~~~~~~~~~~~~~~vi~~~~~ 128 (141)
T cd02039 78 VDFLKKLLEKLN--ADVVVVGDDFLFGFDRWGNLRYEELKSGGEVVVVPRTGY 128 (141)
T ss_pred HHHHHHHHHHCC--CCEEEECCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCC
T ss_conf 999999996378--744998774145886306989999776988999788677