HHsearch alignment for GI: 254780649 and conserved domain: pfam01467
>pfam01467 CTP_transf_2 Cytidylyltransferase. This family includes: Cholinephosphate cytidylyltransferase. Glycerol-3-phosphate cytidylyltransferase.
Probab=100.00 E-value=4.7e-39 Score=245.59 Aligned_cols=147 Identities=23% Similarity=0.346 Sum_probs=124.4
Q ss_pred EECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC-CCCCCCCHHHHHHHHHHHH
Q ss_conf 827789713389999999999862998899997589987555668899999999863104-7532134255310003289
Q gi|254780649|r 24 LFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIK-NPRIRITAFEAYLNHTETF 102 (216)
Q Consensus 24 ifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~-~~~i~v~~~E~~~~~syT~ 102 (216)
T Consensus 1 i~gGsFdP~H~GHl~i~~~a~~~~~~d~v~~ip~~~~p~k~~~~~~~~~~R~~ml~~a~~~~~~~~v~~~e--------- 71 (148)
T pfam01467 1 LFGGTFDPIHLGHLRLLEQAKELFDLDKIVGVPSDESPHKDTKNLFSAEERLEMLELALEVDPNLEVDDFE--------- 71 (148)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECH---------
T ss_conf 97725798879999999999997699879999767656667888899999999999998239976997330---------
Q ss_pred HHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHCC
Q ss_conf 99999720136784389616881357777761999997589899938998714321589999863258812334542058
Q gi|254780649|r 103 HTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHILCTTS 182 (216)
Q Consensus 103 dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (216)
T Consensus 72 -----------~~~~~~i~G~D~~~~~~~W~~~~~i~~~~~~~v~~R~~~~~~~~~--------------~~~~~~~~~~ 126 (148)
T pfam01467 72 -----------DLDVYFIIGADALVNLRGWRGVTELLPEFQIVVVNRPLDYGLETV--------------FLREELDKYP 126 (148)
T ss_pred -----------HHHHHHHHCCCHHHHCCCCCCHHHHHHHCCEEEEECCCCCCCCHH--------------HHHHHHHHCC
T ss_conf -----------267899984990554488787999995077899828999750123--------------4133443235
Q ss_pred CCEEEEEECCCCCCCHHHHHHH
Q ss_conf 9809998074688688999999
Q gi|254780649|r 183 PPSWLFIHDRHHIISSTAIRKK 204 (216)
Q Consensus 183 ~~~~~~i~~~~~~ISST~IR~~ 204 (216)
T Consensus 127 ~~~~~~~~~~~~~ISST~IR~r 148 (148)
T pfam01467 127 LGKIVIPDLPYNDISSTEIRER 148 (148)
T ss_pred CCCEEECCCCCCCCCCHHHCCC
T ss_conf 7737978787576482886297