HHsearch alignment for GI: 254780649 and conserved domain: pfam06574

>pfam06574 FAD_syn FAD synthetase. This family corresponds to the N terminal domain of the bifunctional enzyme riboflavin kinase / FAD synthetase. These enzymes have both ATP:riboflavin 5'-phospho transferase and ATP:FMN-adenylyltransferase activity. They catalyse the 5'-phosphorylation of riboflavin to FMN and the adenylylation of FMN to FAD. This domain is thought to have the flavin mononucleotide (FMN) adenylyltransferase activity.
Probab=97.36  E-value=0.005  Score=37.82  Aligned_cols=109  Identities=20%  Similarity=0.196  Sum_probs=57.8

Q ss_pred             CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC---CCCEEEEE--ECCC---CCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf             7789987899827789713389999999999862---99889999--7589---98755566889999999986310475
Q gi|254780649|r   14 PKVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKL---NLDQLWWI--ITPF---NSVKNYNLSSSLEKRISLSQSLIKNP   85 (216)
Q Consensus        14 p~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l---~ld~v~~i--ps~~---~p~K~~~~~~~~~~R~~m~~~~~~~~   85 (216)
T Consensus         2 ~~~~~~svvti--G~FDGvH~GHq~li~~~~~~a~~~~~~~~viTF~phP~~~l~~~~~~~~l~~~~~K~~~l~~~-Gid   78 (158)
T pfam06574         2 PEDPRGSVVTI--GNFDGVHLGHQALIAHAKEIARELGLPSVVVTFEPHPREVFAPDKAPERLTTLREKIELLAEL-GVD   78 (158)
T ss_pred             CCCCCCEEEEE--ECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCHHCCCHHHHHHHHHHC-CCC
T ss_conf             98889819999--746531589999999999999982997899996498778608766641015799999999966-999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHH-HHCCCCCCCEEEECCCCCHH
Q ss_conf             3213425531000328999999-72013678438961688135
Q gi|254780649|r   86 RIRITAFEAYLNHTETFHTILQ-VKKHNKSVNFVWIMGADNIK  127 (216)
Q Consensus        86 ~i~v~~~E~~~~~syT~dtL~~-lk~~~p~~~l~fiiG~D~l~  127 (216)
T Consensus        79 ~~~~i~F~~~~~~ls~e~Fi~~iL~~~l~~~--~ivvG~df~F  119 (158)
T pfam06574        79 RLLVLPFDKEFAKLSAEEFIENILVKGLGAK--HVVVGFDFRF  119 (158)
T ss_pred             EEEEEHHHHHHHCCCHHHHHHHHHHHCCCEE--EEEECCCCCC
T ss_conf             9998225799874999999999987167624--8997365015