HHsearch alignment for GI: 254780649 and conserved domain: pfam06574
>pfam06574 FAD_syn FAD synthetase. This family corresponds to the N terminal domain of the bifunctional enzyme riboflavin kinase / FAD synthetase. These enzymes have both ATP:riboflavin 5'-phospho transferase and ATP:FMN-adenylyltransferase activity. They catalyse the 5'-phosphorylation of riboflavin to FMN and the adenylylation of FMN to FAD. This domain is thought to have the flavin mononucleotide (FMN) adenylyltransferase activity.
Probab=97.36 E-value=0.005 Score=37.82 Aligned_cols=109 Identities=20% Similarity=0.196 Sum_probs=57.8
Q ss_pred CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC---CCCEEEEE--ECCC---CCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 7789987899827789713389999999999862---99889999--7589---98755566889999999986310475
Q gi|254780649|r 14 PKVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKL---NLDQLWWI--ITPF---NSVKNYNLSSSLEKRISLSQSLIKNP 85 (216)
Q Consensus 14 p~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l---~ld~v~~i--ps~~---~p~K~~~~~~~~~~R~~m~~~~~~~~ 85 (216)
T Consensus 2 ~~~~~~svvti--G~FDGvH~GHq~li~~~~~~a~~~~~~~~viTF~phP~~~l~~~~~~~~l~~~~~K~~~l~~~-Gid 78 (158)
T pfam06574 2 PEDPRGSVVTI--GNFDGVHLGHQALIAHAKEIARELGLPSVVVTFEPHPREVFAPDKAPERLTTLREKIELLAEL-GVD 78 (158)
T ss_pred CCCCCCEEEEE--ECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCHHCCCHHHHHHHHHHC-CCC
T ss_conf 98889819999--746531589999999999999982997899996498778608766641015799999999966-999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH-HHCCCCCCCEEEECCCCCHH
Q ss_conf 3213425531000328999999-72013678438961688135
Q gi|254780649|r 86 RIRITAFEAYLNHTETFHTILQ-VKKHNKSVNFVWIMGADNIK 127 (216)
Q Consensus 86 ~i~v~~~E~~~~~syT~dtL~~-lk~~~p~~~l~fiiG~D~l~ 127 (216)
T Consensus 79 ~~~~i~F~~~~~~ls~e~Fi~~iL~~~l~~~--~ivvG~df~F 119 (158)
T pfam06574 79 RLLVLPFDKEFAKLSAEEFIENILVKGLGAK--HVVVGFDFRF 119 (158)
T ss_pred EEEEEHHHHHHHCCCHHHHHHHHHHHCCCEE--EEEECCCCCC
T ss_conf 9998225799874999999999987167624--8997365015