HHsearch results for GI: 254780649 and protein with PDBid: 1f9a_A
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.88 E-value=7.5e-23 Score=150.91 Aligned_cols=140 Identities=14% Similarity=0.189 Sum_probs=91.1
Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCC-CCCCCHHHHHHHH
Q ss_conf 789982778971338999999999986299889999758998755566889999999986310475-3213425531000
Q gi|254780649|r 20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKNP-RIRITAFEAYLNH 98 (216)
Q Consensus 20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~~-~i~v~~~E~~~~~ 98 (216)
|| |+|||||||+|+||+.+++.|.+.+ |+|+++++..++.+.+....++++|.+|++.++.+. ...+...+...
T Consensus 1 Mk-gi~~GsFdP~H~GH~~li~~a~~~~--d~v~v~~~~~~~~~~~~~~~~~~~R~~mi~~~~~~~~~~~~~~~~~~~-- 75 (168)
T 1f9a_A 1 LR-GFIIGRFQPFHKGHLEVIKKIAEEV--DEIIIGIGSAQKSHTLENPFTAGERILMITQSLKDYDLTYYPIPIKDI-- 75 (168)
T ss_dssp CE-EEEEECCTTCCHHHHHHHHHHTTTC--SEEEEEECSTTCCSSSSCCSCHHHHHHHHHHHHTTSSCEEEEEECCCC--
T ss_pred CE-EEEECCCCCCCHHHHHHHHHHHHHC--CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC--
T ss_conf 96-8995245989999999999999978--974898047860136788889999999999998767960898404664--
Q ss_pred HHHHHHHHHHHCCCCCCCEEEECCCCC-HHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHH
Q ss_conf 328999999720136784389616881-3577777619999975898999389987143215899998632588123345
Q gi|254780649|r 99 TETFHTILQVKKHNKSVNFVWIMGADN-IKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHI 177 (216)
Q Consensus 99 syT~dtL~~lk~~~p~~~l~fiiG~D~-l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (216)
.+...+..++++..++..+.+ |.|. ...+..|. ++-|..-+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---------~~~v~~~~--------------------------- 117 (168)
T 1f9a_A 76 EFNSIWVSYVESLTPPFDIVY--SGNPLVRVLFEER---------GYEVKRPE--------------------------- 117 (168)
T ss_dssp SCGGGHHHHHHHHSCCCSEEE--CCCHHHHHHHHHT---------TCEEECCC---------------------------
T ss_pred CHHHHHHHHHHHHCCCEEEEE--CCCHHHHHHHHCC---------CCEEEEEC---------------------------
T ss_conf 207789999987258679998--7709999887648---------98699832---------------------------
Q ss_pred HHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 4205898099980746886889999999879685111
Q gi|254780649|r 178 LCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTL 214 (216)
Q Consensus 178 ~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L 214 (216)
......||||+||+++++|++++++
T Consensus 118 ------------~~~~~~ISST~IR~~i~~g~~~~~~ 142 (168)
T 1f9a_A 118 ------------MFNRKEYSGTEIRRRMLNGEKWEHL 142 (168)
T ss_dssp ------------CCSTTTSSHHHHHHHHHHTCCCGGG
T ss_pred ------------CCCCCCCCHHHHHHHHHCCCCHHHH
T ss_conf ------------4466676679999999859986795