HHsearch results for GI: 254780649 and protein with PDBid: 1kqn_A
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=100.00 E-value=0 Score=299.94 Aligned_cols=185 Identities=18% Similarity=0.161 Sum_probs=148.4
Q ss_pred CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC------CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC-CCCC
Q ss_conf 789987899827789713389999999999862------998899997589987555668899999999863104-7532
Q gi|254780649|r 15 KVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKL------NLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIK-NPRI 87 (216)
Q Consensus 15 ~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l------~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~-~~~i 87 (216)
.+.+...|+||||||||||+||+.+|+.|++.+ .+++++++|++.+|+|+ ..++++||++||++|++ .+++
T Consensus 3 ~~~k~~~vll~~GSFdP~H~GHl~ia~~a~~~l~~~~~~~l~~~~~~P~~~~~~K~--~~~s~~~Rl~Ml~lA~~~~~~~ 80 (279)
T 1kqn_A 3 NSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKK--GLIPAYHRVIMAELATKNSKWV 80 (279)
T ss_dssp ---CEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGGGCCT--TCCCHHHHHHHHHHHTTTCSSE
T ss_pred CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC--CCCCHHHHHHHHHHHHHCCCCE
T ss_conf 86675489996245373429999999999999734256041579980589987688--8999999999999998446867
Q ss_pred CCCHHHHHHH-HHHHHHHHHHHHCCC----------------------------------------CCCCEEEECCCCCH
Q ss_conf 1342553100-032899999972013----------------------------------------67843896168813
Q gi|254780649|r 88 RITAFEAYLN-HTETFHTILQVKKHN----------------------------------------KSVNFVWIMGADNI 126 (216)
Q Consensus 88 ~v~~~E~~~~-~syT~dtL~~lk~~~----------------------------------------p~~~l~fiiG~D~l 126 (216)
.|+++|..++ ++||++||+++++.| |+.+|+||||+|+|
T Consensus 81 ~v~~~E~~~~~~syt~~tL~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fiiG~D~l 160 (279)
T 1kqn_A 81 EVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLL 160 (279)
T ss_dssp EECCTGGGCSSCCCHHHHHHHHHHHHTC--------------------------------------CCCEEEEEEEHHHH
T ss_pred EECHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEEECCHH
T ss_conf 97216861788861899999999984212210012554223333223443222012110123345888418999862536
Q ss_pred HHHHHHHHH-----HHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHH
Q ss_conf 577777619-----999975898999389987143215899998632588123345420589809998074688688999
Q gi|254780649|r 127 KSFHQWHHW-----KRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHILCTTSPPSWLFIHDRHHIISSTAI 201 (216)
Q Consensus 127 ~~l~~W~~~-----~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ISST~I 201 (216)
.+|.+|+.| ++|++.++|+|++|+|+........ ...+.....+.+++.+.+.++||||+|
T Consensus 161 ~~~~~~~~wk~~~~e~il~~~~liV~~R~g~~~~~~~~~--------------~~~l~~~~~~i~~i~~~~~~dISST~I 226 (279)
T 1kqn_A 161 ESFAVPNLWKSEDITQIVANYGLICVTRAGNDAQKFIYE--------------SDVLWKHRSNIHVVNEWIANDISSTKI 226 (279)
T ss_dssp HHTTSTTTSCHHHHHHHHHHTCEEEEESCHHHHHHHHHT--------------CHHHHHTGGGEEEEECCSCCCCCHHHH
T ss_pred HHCCCCCCCCCCCHHHHHCCCCEEEEECCCCCHHHHHHH--------------HHHHHHCCCCEEEECCCCCCCCCHHHH
T ss_conf 454244666521799997008589996899986874200--------------888864549879976888667189999
Q ss_pred HHHHHCCCCCCCCC
Q ss_conf 99998796851116
Q gi|254780649|r 202 RKKIIEQDNTRTLG 215 (216)
Q Consensus 202 R~~l~~~~~i~~L~ 215 (216)
|++|++|+++++|-
T Consensus 227 R~~l~~g~~i~~lv 240 (279)
T 1kqn_A 227 RRALRRGQSIRYLV 240 (279)
T ss_dssp HHHHHTTCCCBTTB
T ss_pred HHHHHCCCCCHHHC
T ss_conf 99998699932638