HHsearch results for GI: 254780649 and protein with PDBid: 3gmi_A
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCSG, protein structure initiative; 1.91A {Methanocaldococcus jannaschii DSM2661}
Probab=99.50 E-value=4.9e-13 Score=94.27 Aligned_cols=182 Identities=11% Similarity=-0.070 Sum_probs=93.6
Q ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC--CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf 87899827789713389999999999862998899997589987--5556688999999998631047532134255310
Q gi|254780649|r 19 GMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSV--KNYNLSSSLEKRISLSQSLIKNPRIRITAFEAYL 96 (216)
Q Consensus 19 ~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~--K~~~~~~~~~~R~~m~~~~~~~~~i~v~~~E~~~ 96 (216)
.+||+-.-|.|||+|+||+.+++++++ -|.++.|+|+.... +..+...+..+|++|+..+..+--++........
T Consensus 51 ~~ki~~i~~EyNPFHnGHlylie~ak~---~d~iI~VmSgnfvQ~~RGepai~~k~~Ra~mAl~~GaDlViELP~~~~~~ 127 (357)
T 3gmi_A 51 KDKIVCDFTEYNPLHKGHKYALEKGKE---HGIFISVLPGPLERSGRGIPYFLNRYIRAEMAIRAGADIVVEGPPMGIMG 127 (357)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHHHHT---SSEEEEEECCTTSBCTTSSBCSSCHHHHHHHHHHHTCSEEEECCCGGGSC
T ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHH---CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCEEEEC
T ss_conf 682899987328986789999999985---59989996898655566774439999999999982888464367536744
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEE-----ECC-CCC----HHHHCCHHHHHHH
Q ss_conf 003289999997201367843896168813577777619999975898999-----389-987----1432158999986
Q gi|254780649|r 97 NHTETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAII-----DRF-DVT----FNYISSPMAKTFE 166 (216)
Q Consensus 97 ~~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~-----~R~-g~~----~~~~~~~~~~~~~ 166 (216)
...|..-.+.-+..... ..++|....+... +.--+.+....++... ... +.. ....+..++....
T Consensus 128 sa~Fa~~aV~ll~~lg~-d~l~FG~e~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~iL~~~~i 202 (357)
T 3gmi_A 128 SGQYMRCLIKMFYSLGA-EIIPRGYIPEKTM----EKVIDCINKGYHIQVKPYKIICIETGEILGEKLNIDNYVIASMSQ 202 (357)
T ss_dssp HHHHHHHHHHHHHHHTC-CEEEEEECCCHHH----HHHHHHHHTTCCEEEETTEEEETTTCCEEESCCCGGGHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCC-CEEECCCCCHHHH----HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 27889889888887297-5220158882799----999999985077376899998865207788887558999755526
Q ss_pred HCCCCHHHHHHHHHCCCCEEEEEECC-CCCCCHHHHHHHHHCCC--CCCCC
Q ss_conf 32588123345420589809998074-68868899999998796--85111
Q gi|254780649|r 167 YARLDESLSHILCTTSPPSWLFIHDR-HHIISSTAIRKKIIEQD--NTRTL 214 (216)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~ISST~IR~~l~~~~--~i~~L 214 (216)
.. .. ............+... ...+|||.||++|++|+ +++++
T Consensus 203 ~~-----~~-i~R~~~~~~~~~i~~~~~~~~SAT~IR~~i~~g~~e~i~~~ 247 (357)
T 3gmi_A 203 MI-----YK-LNREGLKFNPKFVFVKRLEGISGTKIREAIFSGKFEDIKNM 247 (357)
T ss_dssp HH-----HH-HHHTTCCCCCEEEEEECSCCCCHHHHHHHHHTTCGGGTGGG
T ss_pred CE-----EE-HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHH
T ss_conf 54-----41-11211568863123665451169999999985887799873