Query         gi|254780649|ref|YP_003065062.1| nicotinic acid mononucleotide adenylyltransferase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 216
No_of_seqs    115 out of 1961
Neff          7.7 
Searched_HMMs 23785
Date          Tue May 31 19:59:10 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780649.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1yum_A 'probable nicotinate-nu 100.0       0       0  332.5  15.8  192   19-215    22-216 (242)
  2 2h29_A Probable nicotinate-nuc 100.0       0       0  300.8  13.5  168   21-214     3-172 (189)
  3 1kqn_A Nmnat, nicotinamide mon 100.0       0       0  299.9  12.1  185   15-215     3-240 (279)
  4 1nup_A FKSG76; NAD biosynthesi 100.0 1.4E-45       0  283.4  12.5  179   21-214     7-218 (252)
  5 3h05_A Uncharacterized protein 100.0 1.9E-41 1.4E-45  258.1  10.1  147   20-214     2-155 (177)
  6 1k4m_A NAMN adenylyltransferas 100.0 2.7E-37 1.1E-41  234.2  16.7  191   22-215     5-198 (213)
  7 1kam_A Deamido-NAD(+), nicotin 100.0 1.4E-35 6.1E-40  224.2  15.5  174   13-214     2-177 (194)
  8 2qtr_A Nicotinate (nicotinamid 100.0 4.9E-34 2.1E-38  215.4  13.8  168   21-214     3-172 (189)
  9 3nbk_A Phosphopantetheine aden  99.9 1.8E-26 7.7E-31  171.7  12.0  149   13-214    14-163 (177)
 10 2qjo_A Bifunctional NMN adenyl  99.9 6.1E-23 2.6E-27  151.4  13.9   66   16-84      3-69  (341)
 11 1ej2_A Nicotinamide mononucleo  99.9 5.6E-23 2.3E-27  151.6  12.5  142   22-214     5-148 (181)
 12 1od6_A PPAT, phosphopantethein  99.9 2.4E-22   1E-26  148.0  13.6  143   20-214     1-145 (160)
 13 1vlh_A Phosphopantetheine aden  99.9 2.9E-24 1.2E-28  159.0   3.0  146   16-214     9-155 (173)
 14 1f9a_A Hypothetical protein MJ  99.9 7.5E-23 3.1E-27  150.9   9.6  140   20-214     1-142 (168)
 15 3k9w_A Phosphopantetheine aden  99.9   5E-22 2.1E-26  146.2  13.4  143   17-214     2-148 (170)
 16 1qjc_A Phosphopantetheine aden  99.9 7.7E-23 3.3E-27  150.8   9.0  142   20-214     1-144 (158)
 17 3f3m_A Phosphopantetheine aden  99.9   2E-22 8.5E-27  148.4  11.1  142   20-214     3-146 (168)
 18 1o6b_A Phosphopantetheine aden  99.9 3.4E-21 1.4E-25  141.3  12.6   59   20-83      2-60  (169)
 19 3do8_A Phosphopantetheine aden  99.7 2.2E-19 9.1E-24  130.9   1.7  114   20-144     1-115 (148)
 20 1lw7_A Transcriptional regulat  99.7 3.8E-18 1.6E-22  123.7   1.4   63   20-84      2-71  (365)
 21 2qjt_B Nicotinamide-nucleotide  99.6 1.2E-15 5.2E-20  109.3   8.3   60   20-83      6-68  (352)
 22 3gmi_A UPF0348 protein MJ0951;  99.5 4.9E-13 2.1E-17   94.3  13.4  182   19-214    51-247 (357)
 23 2b7l_A Glycerol-3-phosphate cy  99.5 1.1E-13 4.6E-18   98.0   7.1   93   20-125     1-95  (132)
 24 1coz_A Protein (glycerol-3-pho  99.4 9.8E-13 4.1E-17   92.5   7.1   93   20-125     1-95  (129)
 25 3glv_A Lipopolysaccharide core  99.3 4.2E-12 1.8E-16   88.9   6.3   93   19-125     1-95  (143)
 26 3elb_A Ethanolamine-phosphate   98.9 3.4E-09 1.4E-13   72.1   8.3   65   15-81    193-263 (341)
 27 3hl4_A Choline-phosphate cytid  98.9 2.9E-09 1.2E-13   72.5   7.1  130    7-149    64-196 (236)
 28 3elb_A Ethanolamine-phosphate   98.9 5.9E-09 2.5E-13   70.7   7.6  119   16-149     4-125 (341)
 29 2x0k_A Riboflavin biosynthesis  98.5 1.5E-06 6.4E-11   56.8  12.0  113   12-128     9-129 (338)
 30 1mrz_A Riboflavin kinase/FMN a  98.3 1.1E-05 4.4E-10   52.0  10.8   58   22-82      3-67  (293)
 31 3op1_A Macrolide-efflux protei  98.1 1.1E-05 4.6E-10   51.9   7.4   99   19-125    21-132 (308)
 32 1jhd_A Sulfate adenylyltransfe  97.8 0.00016 6.9E-09   45.1   9.6  163   21-211   194-374 (396)
 33 1v47_A ATP sulfurylase; produc  97.7 0.00022 9.3E-09   44.4   8.7  163   21-211   157-332 (349)
 34 1r6x_A ATP:sulfate adenylyltra  97.6   0.001 4.4E-08   40.5  11.5  156   24-211   191-370 (395)
 35 1m8p_A Sulfate adenylyltransfe  97.4  0.0039 1.7E-07   37.1  12.1  162   21-211   192-372 (573)
 36 2gks_A Bifunctional SAT/APS ki  97.4 0.00091 3.8E-08   40.8   8.4  163   21-211   165-348 (546)
 37 1g8f_A Sulfate adenylyltransfe  97.4   0.003 1.3E-07   37.8  11.0  154   27-211   195-371 (511)
 38 1x6v_B Bifunctional 3'-phospho  97.3  0.0054 2.3E-07   36.4  11.5  159   21-211   414-601 (630)
 39 3cr8_A Sulfate adenylyltranfer  97.0  0.0099 4.2E-07   34.8  10.3   93   26-126   169-268 (552)
 40 2x6q_A Trehalose-synthase TRET  84.1     2.1 8.8E-05   21.4   5.7  100   49-149   193-323 (416)
 41 3k5i_A Phosphoribosyl-aminoimi  70.8     5.4 0.00023   19.1   4.6   45    8-59     13-58  (403)
 42 2z04_A Phosphoribosylaminoimid  69.9       3 0.00013   20.5   3.1   37   20-63      2-39  (365)
 43 3da8_A Probable 5'-phosphoribo  67.0     6.5 0.00027   18.6   7.0   99    8-128     2-103 (215)
 44 2ejc_A Pantoate--beta-alanine   62.5     7.9 0.00033   18.1   4.8   60   18-81     20-85  (280)
 45 3l4e_A Uncharacterized peptida  60.1     4.6 0.00019   19.5   2.5   99   20-135     2-100 (206)
 46 1y42_X Tyrosyl-tRNA synthetase  59.3     8.4 0.00035   18.0   3.7   33   21-55     64-102 (392)
 47 1jil_A Tyrrs, tyrosyl-tRNA syn  58.2       6 0.00025   18.8   2.8   34   21-55     32-70  (420)
 48 1iho_A Pantoate--beta-alanine   58.1     9.5  0.0004   17.6   3.8   60   18-81     20-85  (283)
 49 1h3f_A Tyrosyl-tRNA synthetase  57.7     9.1 0.00038   17.7   3.7   40   19-59     35-79  (432)
 50 2w48_A Sorbitol operon regulat  54.7       9 0.00038   17.8   3.2   31   28-58     54-84  (315)
 51 3guz_A Pantothenate synthetase  53.9      11 0.00047   17.2   3.7   60   18-81     20-85  (176)
 52 2a33_A Hypothetical protein; s  53.7      11 0.00048   17.2   4.0   30   18-47     12-41  (215)
 53 3ag6_A Pantothenate synthetase  52.0      11 0.00047   17.3   3.3   59   19-81     22-86  (283)
 54 3mxt_A Pantothenate synthetase  50.9     8.7 0.00037   17.9   2.7   59   18-81     23-87  (285)
 55 1t35_A Hypothetical protein YV  49.1      11 0.00046   17.3   3.0   28   21-48      3-30  (191)
 56 1luc_A Bacterial luciferase; m  48.2      14 0.00058   16.7   4.0   35   20-54      1-41  (355)
 57 3gjz_A Microcin immunity prote  48.0      14 0.00059   16.7   6.0   76    9-87      2-80  (336)
 58 2o0m_A Transcriptional regulat  46.3      11 0.00046   17.3   2.6   32   28-59     86-117 (345)
 59 3efb_A Probable SOR-operon reg  45.4      10 0.00044   17.4   2.4   33   28-60      5-37  (266)
 60 1v8f_A Pantoate-beta-alanine l  43.7      16 0.00069   16.3   6.3   57   21-81     18-80  (276)
 61 3n8h_A Pantothenate synthetase  43.1      17  0.0007   16.2   4.6   61   17-81     21-87  (264)
 62 1fx0_B ATP synthase beta chain  42.9     8.1 0.00034   18.0   1.5   44   12-59    158-204 (498)
 63 2qe7_A ATP synthase subunit al  40.9     7.2  0.0003   18.3   1.0   45   11-59    154-200 (502)
 64 2jan_A Tyrosyl-tRNA synthetase  40.9      11 0.00044   17.4   1.8   33   21-55     32-70  (432)
 65 2pid_A Tyrosyl-tRNA synthetase  39.6      15 0.00061   16.6   2.4   37   19-56     44-85  (356)
 66 1sky_E F1-ATPase, F1-ATP synth  39.3     8.7 0.00036   17.9   1.2   21   13-33    145-165 (473)
 67 3cov_A Pantothenate synthetase  39.0      19 0.00082   15.8   3.5   60   19-81     32-97  (301)
 68 1z69_A COG2141, coenzyme F420-  37.6      20 0.00086   15.7   4.8   33   20-54      1-33  (327)
 69 1weh_A Conserved hypothetical   37.3      21 0.00087   15.7   3.5   29   20-48      1-30  (171)
 70 1f07_A Coenzyme F420-dependent  37.2      21 0.00087   15.7   4.4   33   20-54      1-33  (321)
 71 3fsl_A Aromatic-amino-acid ami  37.2      21 0.00087   15.7   3.8   39   50-91    174-212 (397)
 72 3foc_A Tryptophanyl-tRNA synth  36.9      21 0.00088   15.7   3.3   38   18-57     88-132 (451)
 73 2ts1_A Tyrosyl-tRNA synthetase  35.7      14  0.0006   16.6   1.8   33   21-55     30-68  (419)
 74 1xiy_A Peroxiredoxin, pfaop; a  35.6      22 0.00093   15.5   3.9   40   18-57     42-88  (182)
 75 2ck3_D ATP synthase beta chain  35.5     9.4 0.00039   17.7   0.9   43   13-59    147-192 (482)
 76 3c1a_A Putative oxidoreductase  34.6      17 0.00074   16.1   2.1   28   11-41      2-30  (315)
 77 2r5f_A Transcriptional regulat  33.9      23 0.00099   15.4   3.1   27   34-60      7-33  (264)
 78 3inn_A Pantothenate synthetase  33.6      24   0.001   15.3   6.2   59   19-81     42-106 (314)
 79 2i7g_A Monooxygenase, AGR_C_41  29.7      28  0.0012   15.0   5.0   38   17-54     19-68  (376)
 80 1d2f_A MALY protein; aminotran  29.7      28  0.0012   15.0   3.1   37   50-89    163-199 (390)
 81 2ck3_A ATP synthase alpha chai  29.4      12 0.00051   17.0   0.6   20   12-31    155-174 (510)
 82 3kv1_A Transcriptional repress  28.9      29  0.0012   14.9   3.0   30   27-58      2-31  (267)
 83 1fx0_A ATP synthase alpha chai  28.2      12 0.00053   17.0   0.5   33   11-47    155-187 (507)
 84 3l6d_A Putative oxidoreductase  28.2      21 0.00088   15.7   1.6   31   11-46      1-31  (306)
 85 1jay_A Coenzyme F420H2:NADP+ o  28.1      20 0.00084   15.8   1.5   29   20-54      1-29  (212)
 86 1ydh_A AT5G11950; structural g  27.9      30  0.0013   14.8   3.9   31   18-48      8-38  (216)
 87 3e8x_A Putative NAD-dependent   26.5      24 0.00099   15.4   1.7   40    6-55     12-51  (236)
 88 1jfl_A Aspartate racemase; alp  25.7      16 0.00069   16.3   0.7   32  114-148   115-146 (228)
 89 2cyb_A Tyrosyl-tRNA synthetase  25.6      33  0.0014   14.5   3.2   35   21-57     32-71  (323)
 90 3ew7_A LMO0794 protein; Q8Y8U8  25.5      24   0.001   15.3   1.5   30   20-55      1-30  (221)
 91 1kjq_A GART 2, phosphoribosylg  24.7      34  0.0014   14.4   5.0   48   11-64      3-50  (391)
 92 2r9v_A ATP synthase subunit al  24.1      15 0.00062   16.5   0.2   44   12-59    168-213 (515)
 93 2x5f_A Aspartate_tyrosine_phen  24.0      35  0.0015   14.3   4.6   32   48-82    188-219 (430)
 94 1c7n_A Cystalysin; transferase  23.2      37  0.0015   14.3   3.8   35   50-87    165-199 (399)
 95 2dpy_A FLII, flagellum-specifi  22.9      37  0.0016   14.2   4.9   45   12-60    150-194 (438)
 96 3gqb_B V-type ATP synthase bet  22.6      15 0.00064   16.5   0.1   35    8-46    136-170 (464)
 97 3fj2_A Monooxygenase-like prot  22.5      38  0.0016   14.2   2.5   27  101-127    29-55  (186)
 98 2inb_A Hypothetical protein; Z  22.4      38  0.0016   14.2   3.7   59   89-149    70-130 (140)
 99 3ez1_A Aminotransferase MOCR f  21.7      39  0.0017   14.1   3.2   32   51-85    175-206 (423)
100 1iir_A Glycosyltransferase GTF  20.9      41  0.0017   14.0   3.6   31   20-56      1-35  (415)
101 1bw0_A TAT, protein (tyrosine   20.7      41  0.0017   13.9   2.2   34   50-86    178-211 (416)

No 1  
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=100.00  E-value=0  Score=332.50  Aligned_cols=192  Identities=21%  Similarity=0.305  Sum_probs=165.0

Q ss_pred             CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCHHHHHHH
Q ss_conf             8789982778971338999999999986299889999758998755566889999999986310-475321342553100
Q gi|254780649|r   19 GMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLI-KNPRIRITAFEAYLN   97 (216)
Q Consensus        19 ~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~-~~~~i~v~~~E~~~~   97 (216)
                      +||||||||||||||.||+.+++.|.+.+++|+|||+|+++||+|+.. .+++++|++||++++ +.+++.|+++|.+.+
T Consensus        22 ~kkIgifgGSFdP~H~GHl~i~~~a~~~~~~d~V~~~p~~~n~~K~~~-~~~~~~Rl~m~~~a~~~~~~i~vs~~E~~~~  100 (242)
T 1yum_A           22 GKRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPPHRETP-QVSAAQRLAMVERAVAGVERLTVDPRELQRD  100 (242)
T ss_dssp             CCEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCCGGGSCT-TCCHHHHHHHHHHHHTTCTTEEECCGGGGSS
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC-CCCHHHHHHHHHHHHHHCCCEEEECCCCCCC
T ss_conf             986999675857150999999999999819998999983979887876-5588999999877765156058502433478


Q ss_pred             -HHHHHHHHHHHHCCC-CCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHH
Q ss_conf             -032899999972013-678438961688135777776199999758989993899871432158999986325881233
Q gi|254780649|r   98 -HTETFHTILQVKKHN-KSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLS  175 (216)
Q Consensus        98 -~syT~dtL~~lk~~~-p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~  175 (216)
                       ++||+|||.++++++ |+.+++||||+|+|.+|++|++|++|++.++|+|++|+|+......+.............   
T Consensus       101 ~~~~t~dtL~~l~~~~~~~~~~~~iiG~D~l~~i~~W~~~~~il~~~~ilV~~R~~~~~~~~~~~~~~~~~~~~~~~---  177 (242)
T 1yum_A          101 KPSYTIDTLESVRAELAADDQLFMLIGWDAFCGLPTWHRWEALLDHCHIVVLQRPDADSEPPESLRDLLAARSVADP---  177 (242)
T ss_dssp             SSCCHHHHHHHHHHHSCTTCEEEEEEEHHHHTTGGGSTTGGGSTTTCEEEEEECSSSCCCCCGGGHHHHHHHBCSCG---
T ss_pred             CCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHCCCCCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCH---
T ss_conf             87309999999876414675179974653064336776899996268589996898642005789999998731268---


Q ss_pred             HHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf             4542058980999807468868899999998796851116
Q gi|254780649|r  176 HILCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTLG  215 (216)
Q Consensus       176 ~~~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L~  215 (216)
                       .......+.|.+++.+.++||||+||+++++|+++++|-
T Consensus       178 -~~~~~~~~~i~~~~~~~~dISST~IR~~i~~g~~i~~lv  216 (242)
T 1yum_A          178 -QALKGPGGQITFVWQTPLAVSATQIRALLGAGRSVRFLV  216 (242)
T ss_dssp             -GGCCSSSCCEEEEECCCCSCCHHHHHHHHHTTCCCBTTB
T ss_pred             -HHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCHHHHC
T ss_conf             -887376885899689974416999999998599913708


No 2  
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=100.00  E-value=0  Score=300.77  Aligned_cols=168  Identities=23%  Similarity=0.370  Sum_probs=152.7

Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC-CCCCCCCHHHHHHH-H
Q ss_conf             899827789713389999999999862998899997589987555668899999999863104-75321342553100-0
Q gi|254780649|r   21 KIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIK-NPRIRITAFEAYLN-H   98 (216)
Q Consensus        21 kIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~-~~~i~v~~~E~~~~-~   98 (216)
                      |||||||||||||.||+.+++.|.+.+++|+|+|+|++.||+|.+...+++++|++||+++++ .+++.|+++|...+ .
T Consensus         3 kI~lfgGsFdP~h~GH~~i~~~a~~~~~~d~v~~~~s~~~p~K~~~~~~s~~~R~~m~~~~~~~~~~~~v~~~e~~~~~~   82 (189)
T 2h29_A            3 KIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPLKKHHDFIDVQHRLTMIQMIIDELGFGDICDDEIKRGGQ   82 (189)
T ss_dssp             EEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBCTTSCCCSSCCCHHHHHHHHHHHHHHTCCEECCHHHHHCSB
T ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECHHHCCCCC
T ss_conf             69996327683779999999999998099959999705787534335589999999997522211432010022205765


Q ss_pred             HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHHH
Q ss_conf             32899999972013678438961688135777776199999758989993899871432158999986325881233454
Q gi|254780649|r   99 TETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHIL  178 (216)
Q Consensus        99 syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (216)
                      +||++||.+++++||+.+++|+||+|++.+|++|++|++|++.++++|++|+++..+.                      
T Consensus        83 ~~t~~tl~~l~~~~p~~~~~~i~G~D~~~~l~~w~~~e~l~~~~~~~v~~R~~~~~~~----------------------  140 (189)
T 2h29_A           83 SYTYDTIKAFKEQHKDSELYFVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNV----------------------  140 (189)
T ss_dssp             CCHHHHHHHHHHHSTTEEEEEEEEHHHHTTGGGSTTHHHHHHHCEEEEECCSSSCCCC----------------------
T ss_pred             CCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC----------------------
T ss_conf             3014788998876888546987156166565326269999964877776688754012----------------------


Q ss_pred             HHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             205898099980746886889999999879685111
Q gi|254780649|r  179 CTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTL  214 (216)
Q Consensus       179 ~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L  214 (216)
                          ...+.+++.+..+||||+||+++++|+++++|
T Consensus       141 ----~~~~~~~~~~~~~ISST~IR~~i~~g~~i~~l  172 (189)
T 2h29_A          141 ----ENAMIAIQIPRVDISSTMIRQRVSEGKSIQVL  172 (189)
T ss_dssp             ----CTTSEEECCCCBCCCHHHHHHHHHTTCCCBTT
T ss_pred             ----CCCCHHCCCCCCEECHHHHHHHHHCCCCCHHH
T ss_conf             ----34210025876646789999999849990252


No 3  
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=100.00  E-value=0  Score=299.94  Aligned_cols=185  Identities=18%  Similarity=0.161  Sum_probs=148.4

Q ss_pred             CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC------CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC-CCCC
Q ss_conf             789987899827789713389999999999862------998899997589987555668899999999863104-7532
Q gi|254780649|r   15 KVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKL------NLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIK-NPRI   87 (216)
Q Consensus        15 ~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l------~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~-~~~i   87 (216)
                      .+.+...|+||||||||||+||+.+|+.|++.+      .+++++++|++.+|+|+  ..++++||++||++|++ .+++
T Consensus         3 ~~~k~~~vll~~GSFdP~H~GHl~ia~~a~~~l~~~~~~~l~~~~~~P~~~~~~K~--~~~s~~~Rl~Ml~lA~~~~~~~   80 (279)
T 1kqn_A            3 NSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKK--GLIPAYHRVIMAELATKNSKWV   80 (279)
T ss_dssp             ---CEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGGGCCT--TCCCHHHHHHHHHHHTTTCSSE
T ss_pred             CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC--CCCCHHHHHHHHHHHHHCCCCE
T ss_conf             86675489996245373429999999999999734256041579980589987688--8999999999999998446867


Q ss_pred             CCCHHHHHHH-HHHHHHHHHHHHCCC----------------------------------------CCCCEEEECCCCCH
Q ss_conf             1342553100-032899999972013----------------------------------------67843896168813
Q gi|254780649|r   88 RITAFEAYLN-HTETFHTILQVKKHN----------------------------------------KSVNFVWIMGADNI  126 (216)
Q Consensus        88 ~v~~~E~~~~-~syT~dtL~~lk~~~----------------------------------------p~~~l~fiiG~D~l  126 (216)
                      .|+++|..++ ++||++||+++++.|                                        |+.+|+||||+|+|
T Consensus        81 ~v~~~E~~~~~~syt~~tL~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fiiG~D~l  160 (279)
T 1kqn_A           81 EVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLL  160 (279)
T ss_dssp             EECCTGGGCSSCCCHHHHHHHHHHHHTC--------------------------------------CCCEEEEEEEHHHH
T ss_pred             EECHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEEECCHH
T ss_conf             97216861788861899999999984212210012554223333223443222012110123345888418999862536


Q ss_pred             HHHHHHHHH-----HHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHH
Q ss_conf             577777619-----999975898999389987143215899998632588123345420589809998074688688999
Q gi|254780649|r  127 KSFHQWHHW-----KRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHILCTTSPPSWLFIHDRHHIISSTAI  201 (216)
Q Consensus       127 ~~l~~W~~~-----~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ISST~I  201 (216)
                      .+|.+|+.|     ++|++.++|+|++|+|+........              ...+.....+.+++.+.+.++||||+|
T Consensus       161 ~~~~~~~~wk~~~~e~il~~~~liV~~R~g~~~~~~~~~--------------~~~l~~~~~~i~~i~~~~~~dISST~I  226 (279)
T 1kqn_A          161 ESFAVPNLWKSEDITQIVANYGLICVTRAGNDAQKFIYE--------------SDVLWKHRSNIHVVNEWIANDISSTKI  226 (279)
T ss_dssp             HHTTSTTTSCHHHHHHHHHHTCEEEEESCHHHHHHHHHT--------------CHHHHHTGGGEEEEECCSCCCCCHHHH
T ss_pred             HHCCCCCCCCCCCHHHHHCCCCEEEEECCCCCHHHHHHH--------------HHHHHHCCCCEEEECCCCCCCCCHHHH
T ss_conf             454244666521799997008589996899986874200--------------888864549879976888667189999


Q ss_pred             HHHHHCCCCCCCCC
Q ss_conf             99998796851116
Q gi|254780649|r  202 RKKIIEQDNTRTLG  215 (216)
Q Consensus       202 R~~l~~~~~i~~L~  215 (216)
                      |++|++|+++++|-
T Consensus       227 R~~l~~g~~i~~lv  240 (279)
T 1kqn_A          227 RRALRRGQSIRYLV  240 (279)
T ss_dssp             HHHHHTTCCCBTTB
T ss_pred             HHHHHCCCCCHHHC
T ss_conf             99998699932638


No 4  
>1nup_A FKSG76; NAD biosynthesis, cytoplasm, mitochondria, pyridine adenylyltransferase, enzyme catalysi; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=100.00  E-value=1.4e-45  Score=283.35  Aligned_cols=179  Identities=20%  Similarity=0.278  Sum_probs=145.8

Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEE----EECCCCCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCHHHHH
Q ss_conf             8998277897133899999999998629988999----9758998755566889999999986310-4753213425531
Q gi|254780649|r   21 KIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWW----IITPFNSVKNYNLSSSLEKRISLSQSLI-KNPRIRITAFEAY   95 (216)
Q Consensus        21 kIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~----ips~~~p~K~~~~~~~~~~R~~m~~~~~-~~~~i~v~~~E~~   95 (216)
                      .|+||||||||||.||+.+++.|.+.++++++++    ++++.++.|.+...+++++|++||++|+ +++++.|+++|..
T Consensus         7 ~vlv~~GSFdP~H~GHl~i~~~a~~~~~~~~~~~~~~~~~~p~~~~~~k~~~~~~~~Rl~Ml~la~~~~~~~~v~~~E~~   86 (252)
T 1nup_A            7 VVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVAMARLALQTSDWIRVDPWESE   86 (252)
T ss_dssp             EEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSSSCCCCHHHHHHHHHHHGGGCSSEEECCHHHH
T ss_pred             EEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECHHHHH
T ss_conf             79997055787589999999999998674665567777875888987678889999999999999860577242216664


Q ss_pred             HH-HHHHHHHHHHHHCCC---------------------CCCCEEEECCCCCHHHHHHHHHH-----HHHHHHCCEEEEE
Q ss_conf             00-032899999972013---------------------67843896168813577777619-----9999758989993
Q gi|254780649|r   96 LN-HTETFHTILQVKKHN---------------------KSVNFVWIMGADNIKSFHQWHHW-----KRIVTTVPIAIID  148 (216)
Q Consensus        96 ~~-~syT~dtL~~lk~~~---------------------p~~~l~fiiG~D~l~~l~~W~~~-----~~ll~~~~iiV~~  148 (216)
                      ++ .+||++||.++++.|                     |+.+++||||+|+|.+|++|++|     ++|++.++++|++
T Consensus        87 ~~~~s~Ti~tl~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fiiG~D~l~~l~~wk~~~~~~~e~il~~~~liv~~  166 (252)
T 1nup_A           87 QAQWMETVKVLRHHHSKLLRSPPQMEGPDHGKALFSTPAAVPELKLLCGADVLKTFQTPNLWKDAHIQEIVEKFGLVCVG  166 (252)
T ss_dssp             SSSCCCHHHHHHHHHHHHC--------------------CCCEEEEEEEHHHHHHTTSTTTSCHHHHHHHHHHTCEEEEC
T ss_pred             CCCCEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCHHHHHHHCCCCCCHHHHHHHHHHCCEEEEC
T ss_conf             37980299999999998243343212210011110146876527888563687655203642215699999859999976


Q ss_pred             CCCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEE-ECCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             89987143215899998632588123345420589809998-0746886889999999879685111
Q gi|254780649|r  149 RFDVTFNYISSPMAKTFEYARLDESLSHILCTTSPPSWLFI-HDRHHIISSTAIRKKIIEQDNTRTL  214 (216)
Q Consensus       149 R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~ISST~IR~~l~~~~~i~~L  214 (216)
                      |+|+.........              ..+.... ..++++ +....+||||+||+++++|+++++|
T Consensus       167 R~~~~~~~~~~~~--------------~~~~~~~-~~i~~~~~~~~~~ISST~IR~~i~~g~~i~~l  218 (252)
T 1nup_A          167 RVSHDPKGYIAES--------------PILRMHQ-HNIHLAKEPVQNEISATYIRRALGQGQSVKYL  218 (252)
T ss_dssp             CTTCCHHHHHHHC--------------HHHHHTG-GGEEEECCCSCCCCCHHHHHHHHHTTCCCBTT
T ss_pred             CCCCCHHHHHHHH--------------HHHHCCC-CCEEEECCCCCCCCCHHHHHHHHHCCCCCHHH
T ss_conf             8986667777666--------------7764067-87899768875668799999999859993263


No 5  
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structural genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=100.00  E-value=1.9e-41  Score=258.11  Aligned_cols=147  Identities=21%  Similarity=0.311  Sum_probs=129.9

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC---CCCCCCCHHHHHH
Q ss_conf             7899827789713389999999999862998899997589987555668899999999863104---7532134255310
Q gi|254780649|r   20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIK---NPRIRITAFEAYL   96 (216)
Q Consensus        20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~---~~~i~v~~~E~~~   96 (216)
                      .|||||||||||||+||+.+++.+.   .+|+|+++|++.||.|+  ..+++++|++||+++++   .+++.++++|...
T Consensus         2 kkI~ifgGsFdP~h~GHl~i~~~~~---~~d~viv~p~~~~~~k~--~~~~~~~R~~m~~~a~~~~~~~~v~v~~~e~~~   76 (177)
T 3h05_A            2 KKIAIFGSAFNPPSLGHKSVIESLS---HFDLVLLEPSIAHAWGK--NMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQAL   76 (177)
T ss_dssp             CEEEEEEECCSSCCHHHHHHHTTCT---TSSEEEEEECC---------CCCHHHHHHHHHHHHHHHCCTTEEECCHHHHH
T ss_pred             CEEEEECCCCCHHHHHHHHHHHHHH---HCCEEEEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHC
T ss_conf             5799966545541299999999997---26969998202576567--878999999999999987312682675444322


Q ss_pred             H-HH---HHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCH
Q ss_conf             0-03---2899999972013678438961688135777776199999758989993899871432158999986325881
Q gi|254780649|r   97 N-HT---ETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDE  172 (216)
Q Consensus        97 ~-~s---yT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~  172 (216)
                      . ++   +|+++|+++++.||+.+|+|+||+|++.+|++|++|++|++.+.++|++|.                      
T Consensus        77 ~~~~~s~~t~~~l~~l~~~~~~~~~~~iiG~D~~~~~~~W~~~~~i~~~~~~~~~pr~----------------------  134 (177)
T 3h05_A           77 YQPGQSVTTYALLEKIQEIYPTADITFVIGPDNFFKFAKFYKAEEITERWTVMACPEK----------------------  134 (177)
T ss_dssp             C----CCCHHHHHHHHHHHSTTSEEEEEECHHHHHTGGGSTTHHHHHHHSEEEECCCS----------------------
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCHHHHHHHCCEEEECCC----------------------
T ss_conf             6553312378999988741885031776324067674764278999850867984587----------------------


Q ss_pred             HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             233454205898099980746886889999999879685111
Q gi|254780649|r  173 SLSHILCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTL  214 (216)
Q Consensus       173 ~~~~~~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L  214 (216)
                                           .+||||+||++++.|+++++|
T Consensus       135 ---------------------~~ISST~IR~~l~~g~~i~~~  155 (177)
T 3h05_A          135 ---------------------VKIRSTDIRNALIEGKDISTY  155 (177)
T ss_dssp             ---------------------SCCCHHHHHHHHHHTCCCTTT
T ss_pred             ---------------------CCCCHHHHHHHHHCCCCHHHH
T ss_conf             ---------------------784999999999859994697


No 6  
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=100.00  E-value=2.7e-37  Score=234.24  Aligned_cols=191  Identities=17%  Similarity=0.236  Sum_probs=152.2

Q ss_pred             EEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH-CCCCCCCCCHHHHHHHH-H
Q ss_conf             998277897133899999999998629988999975899875556688999999998631-04753213425531000-3
Q gi|254780649|r   22 IGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSL-IKNPRIRITAFEAYLNH-T   99 (216)
Q Consensus        22 IgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~-~~~~~i~v~~~E~~~~~-s   99 (216)
                      +|||||||||||+||+.|++.|++.+++|+|+++|++.++.|... .....+|..|+..+ .....+.++..|..... .
T Consensus         5 ~ai~gGSFNP~h~gHl~~~~~a~~~~~~d~v~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (213)
T 1k4m_A            5 QALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPHRPQP-EANSVQRKHMLELAIADKPLFTLDERELKRNAPS   83 (213)
T ss_dssp             EEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCTTSCCC-SSCHHHHHHHHHHHHTTCTTEEECCHHHHCSSCC
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC-CCCHHHHHHHHHHHHHHCCCCEEEEEHHCCCCCC
T ss_conf             799705608264999999999999809999999994888533455-6209999999866664234420110001146775


Q ss_pred             HHHH-HHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHHH
Q ss_conf             2899-999972013678438961688135777776199999758989993899871432158999986325881233454
Q gi|254780649|r  100 ETFH-TILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHIL  178 (216)
Q Consensus       100 yT~d-tL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (216)
                      ++.. +....+..+|+..++|++|+|++..+.+|+.|++++..++|+|+.|+|+...................  ....+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~R~~~~~~~~~~~~~~~~~~~~~~--~~~~~  161 (213)
T 1k4m_A           84 YTAQTLKEWRQEQGPDVPLAFIIGQDSLLTFPTWYEYETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTH--NPEDL  161 (213)
T ss_dssp             CHHHHHHHHHHHHCTTSCEEEEEEHHHHHHGGGSTTHHHHHHHCEEEEECCTTCCSSCSSHHHHHHHHHHBCS--CTTHH
T ss_pred             CEEEHHHHHHHHCCCCCEEEECCCCHHHHCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH--HHHHH
T ss_conf             1000166666312777448841573001001015539998378739999379963666789999999863000--02343


Q ss_pred             HHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf             2058980999807468868899999998796851116
Q gi|254780649|r  179 CTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTLG  215 (216)
Q Consensus       179 ~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L~  215 (216)
                      .....+.+++.+.+..+||||+||+++++|+++++|.
T Consensus       162 ~~~~~~~~~~~~~~~~~ISST~IR~~l~~~~~i~~lv  198 (213)
T 1k4m_A          162 HLQPAGKIYLAETPWFNISATIIRERLQNGESCEDLL  198 (213)
T ss_dssp             HHSSSCCEEEECCCCCCCCHHHHHHHHHTTCCCTTTS
T ss_pred             HCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCHHHC
T ss_conf             1277864999269878709999999998499921508


No 7  
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=100.00  E-value=1.4e-35  Score=224.24  Aligned_cols=174  Identities=26%  Similarity=0.462  Sum_probs=150.0

Q ss_pred             CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCH
Q ss_conf             6778998789982778971338999999999986299889999758998755566889999999986310-475321342
Q gi|254780649|r   13 MPKVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLI-KNPRIRITA   91 (216)
Q Consensus        13 ~p~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~-~~~~i~v~~   91 (216)
                      ||  +.+.|||||||||||||+||+.|++.|++.+++++|++++++.++.+.........+|..|+.+.. +...+.+++
T Consensus         2 ~~--~~~kkIaifgGSFdP~H~GH~~ii~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (194)
T 1kam_A            2 MP--GGSKKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQSNPSFKLEL   79 (194)
T ss_dssp             ------CCEEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC---------CHHHHHHHHHHHHTTCTTEEECC
T ss_pred             CC--CCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHH
T ss_conf             78--9997799956475848799999999999985997899996356663334205799999998766422776420004


Q ss_pred             HHHHH-HHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCC
Q ss_conf             55310-00328999999720136784389616881357777761999997589899938998714321589999863258
Q gi|254780649|r   92 FEAYL-NHTETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARL  170 (216)
Q Consensus        92 ~E~~~-~~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~  170 (216)
                      +|... +++||++++.++++.+|...+.+++|+|.+..+.+|..|++++..+.++|+.|++.....              
T Consensus        80 ~e~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------  145 (194)
T 1kam_A           80 VEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVET--------------  145 (194)
T ss_dssp             GGGSTTCCCSHHHHHHHHHHHSTTSEEEEEEETTTTTTCCCCHHHHHHHHHSEEEEEECSSCCCCC--------------
T ss_pred             HHHHCCCCEEEHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--------------
T ss_conf             787646863645567789986488640000116678887624049999997157754375433000--------------


Q ss_pred             CHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             81233454205898099980746886889999999879685111
Q gi|254780649|r  171 DESLSHILCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTL  214 (216)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L  214 (216)
                                  .....+.+....+||||+||+++++|+++++|
T Consensus       146 ------------~~~~~~~~~~~~~ISST~IR~~i~~~~~~~~~  177 (194)
T 1kam_A          146 ------------PYPLLFADVPEFEVSSTMIRERFKSKKPTDYL  177 (194)
T ss_dssp             ------------SSCCEEEECCCBCCCHHHHHHHHHHTCCCTTT
T ss_pred             ------------CCCEEECCCCCCCCCHHHHHHHHHCCCCCHHH
T ss_conf             ------------10100145655656679999999839990374


No 8  
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltransferase; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesis; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=100.00  E-value=4.9e-34  Score=215.40  Aligned_cols=168  Identities=25%  Similarity=0.438  Sum_probs=144.3

Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC-CCCCCCCHHHHHH-HH
Q ss_conf             899827789713389999999999862998899997589987555668899999999863104-7532134255310-00
Q gi|254780649|r   21 KIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIK-NPRIRITAFEAYL-NH   98 (216)
Q Consensus        21 kIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~-~~~i~v~~~E~~~-~~   98 (216)
                      |||||||||||||+||+.|++.|++.+++++|+++|++.++.+..........|..++..... .....++.++... ++
T Consensus         3 ki~if~GsFdP~h~GHl~i~~~a~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (189)
T 2qtr_A            3 KIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRNITSVESRLQMLELATEAEEHFSICLEELSRKGP   82 (189)
T ss_dssp             EEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECSSCTTCTTSCCCCHHHHHHHHHHHHTTCTTEEECCTGGGSCSC
T ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCC
T ss_conf             69996647671749999999999998499989999624566332211558999999998765045530220023323687


Q ss_pred             HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHHH
Q ss_conf             32899999972013678438961688135777776199999758989993899871432158999986325881233454
Q gi|254780649|r   99 TETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHIL  178 (216)
Q Consensus        99 syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (216)
                      +||++|+.++++.+|+..++|++|+|.+..+..|+++++++..+++.+.+|++.....                      
T Consensus        83 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------  140 (189)
T 2qtr_A           83 SYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRT----------------------  140 (189)
T ss_dssp             CCHHHHHHHHHHHCTTCEEEEEEEHHHHHHGGGSTTHHHHTTTCEEEEECCTTCCCCC----------------------
T ss_pred             EEEHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC----------------------
T ss_conf             0217889999987777550322020577788799999999864341000375422123----------------------


Q ss_pred             HHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             205898099980746886889999999879685111
Q gi|254780649|r  179 CTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTL  214 (216)
Q Consensus       179 ~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L  214 (216)
                          .....+.+....+||||+||+++++|+++++|
T Consensus       141 ----~~~~~~~~~~~~~ISST~IR~~~~~~~~~~~~  172 (189)
T 2qtr_A          141 ----PYPITTVEIPEFAVSSSLLRERYKEKKTCKYL  172 (189)
T ss_dssp             ----SSCCEEECCCCCCCCHHHHHHHHHTTCCCTTT
T ss_pred             ----CCCEEECCCCCCCCCHHHHHHHHHCCCCCHHH
T ss_conf             ----32035404666740799999999839990250


No 9  
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3lcj_A* 1tfu_A
Probab=99.94  E-value=1.8e-26  Score=171.72  Aligned_cols=149  Identities=13%  Similarity=0.044  Sum_probs=103.0

Q ss_pred             CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC-CCCCCCH
Q ss_conf             677899878998277897133899999999998629988999975899875556688999999998631047-5321342
Q gi|254780649|r   13 MPKVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKN-PRIRITA   91 (216)
Q Consensus        13 ~p~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~-~~i~v~~   91 (216)
                      |=+-+.-||||||||||||||+||+.+|+.|++.+  |+||++|+..+++|....  ..+.+..+...+... .......
T Consensus        14 ~~~~~~~mriai~~GsFdPiH~GHl~i~~~a~~~~--D~viv~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~   89 (177)
T 3nbk_A           14 LVPRGSHMTGAVCPGSFDPVTLGHVDIFERAAAQF--DEVVVAILVNPAKTGMFD--LDERIAMVKESTTHLPNLRVQVG   89 (177)
T ss_dssp             ------CCCEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEECCCTTSCCSSC--HHHHHHHHHHHCTTCTTEEEEEC
T ss_pred             CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC--CEEEEEECCCCCCCCCCC--HHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             55589986699968677988789999999999869--989998345787666557--99999999876540245422333


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCC
Q ss_conf             55310003289999997201367843896168813577777619999975898999389987143215899998632588
Q gi|254780649|r   92 FEAYLNHTETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLD  171 (216)
Q Consensus        92 ~E~~~~~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~  171 (216)
                            .....+..  ...........++.+.|....+..|+..+++.+...+++..|++                    
T Consensus        90 ------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~--------------------  141 (177)
T 3nbk_A           90 ------HGLVVDFV--RSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPR--------------------  141 (177)
T ss_dssp             ------CSCHHHHH--HHTTCCEEEEEECTTCCHHHHHHHHHHHHHHHCCEEEEEECCGG--------------------
T ss_pred             ------CCHHHHHH--HHCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCC--------------------
T ss_conf             ------21025566--53487087521021411554626999999728977799965887--------------------


Q ss_pred             HHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             1233454205898099980746886889999999879685111
Q gi|254780649|r  172 ESLSHILCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTL  214 (216)
Q Consensus       172 ~~~~~~~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L  214 (216)
                                           ..+||||+||+++++|++|++|
T Consensus       142 ---------------------~~~ISST~IRe~i~~g~~i~~l  163 (177)
T 3nbk_A          142 ---------------------YSFVSSSLAKEVAMLGGDVSEL  163 (177)
T ss_dssp             ---------------------GSSCCHHHHHHHHHTTCCCGGG
T ss_pred             ---------------------CCCCCHHHHHHHHHCCCCHHHH
T ss_conf             ---------------------7753359999999849986795


No 10 
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrolase; two individual domains; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.90  E-value=6.1e-23  Score=151.40  Aligned_cols=66  Identities=18%  Similarity=0.376  Sum_probs=52.9

Q ss_pred             CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE-CCCCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf             89987899827789713389999999999862998899997-5899875556688999999998631047
Q gi|254780649|r   16 VEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWII-TPFNSVKNYNLSSSLEKRISLSQSLIKN   84 (216)
Q Consensus        16 ~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ip-s~~~p~K~~~~~~~~~~R~~m~~~~~~~   84 (216)
                      .+..++||||||||||+|+||+.+++.|.+++  |+|++++ +..++++. ....++++|++|++.++.+
T Consensus         3 ~~~~~~igl~~GtFdP~H~GHl~li~~a~~~~--d~viV~v~s~~~~~~~-~npfs~~eR~~Mi~~a~~~   69 (341)
T 2qjo_A            3 MQTKYQYGIYIGRFQPFHLGHLRTLNLALEKA--EQVIIILGSHRVAADT-RNPWRSPERMAMIEACLSP   69 (341)
T ss_dssp             CSSSEEEEEEEECCTTCCHHHHHHHHHHHHHE--EEEEEEEEEETCCCCS-SSCSCHHHHHHHHHTTSCH
T ss_pred             CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHC--CEEEEEECCCCCCCCC-CCCCCHHHHHHHHHHHHHH
T ss_conf             77721389998664877789999999999779--9899998168668888-8998999999999998777


No 11 
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacterthermautotrophicus} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=99.90  E-value=5.6e-23  Score=151.64  Aligned_cols=142  Identities=15%  Similarity=0.175  Sum_probs=99.4

Q ss_pred             EEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC-CCCCCCCHHHHHHH-HH
Q ss_conf             99827789713389999999999862998899997589987555668899999999863104-75321342553100-03
Q gi|254780649|r   22 IGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIK-NPRIRITAFEAYLN-HT   99 (216)
Q Consensus        22 IgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~-~~~i~v~~~E~~~~-~s   99 (216)
                      +|||||||||+|+||+.+++.|.+.+  |+++++++..++++.+....++++|.+|++.++. .....+..++.... ..
T Consensus         5 ~gl~~G~FdP~H~GH~~l~~~a~~~~--~~v~v~i~~~~~~~~~~~~~~~~~r~~~i~~~l~~~~~~~~~~~~~~~~~~~   82 (181)
T 1ej2_A            5 RGLLVGRMQPFHRGHLQVIKSILEEV--DELIICIGSAQLSHSIRDPFTAGERVMMLTKALSENGIPASRYYIIPVQDIE   82 (181)
T ss_dssp             EEEEEECCTTCCHHHHHHHHHHTTTC--SEEEEEECSTTCCSSSSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCS
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHC--CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHH
T ss_conf             99998646989999999999999977--9988998336667775544309999999998676548863545650565224


Q ss_pred             HHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHHHH
Q ss_conf             28999999720136784389616881357777761999997589899938998714321589999863258812334542
Q gi|254780649|r  100 ETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHILC  179 (216)
Q Consensus       100 yT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (216)
                      ++..+...++..++...+++ .|         |..+.++.+..++-+...+.                            
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~----------------------------  124 (181)
T 1ej2_A           83 CNALWVGHIKMLTPPFDRVY-SG---------NPLVQRLFSEDGYEVTAPPL----------------------------  124 (181)
T ss_dssp             CHHHHHHHHHHHSCCCSEEE-CC---------CHHHHHHHHHTTCCEECCCC----------------------------
T ss_pred             HHHHHHHHHHHHCCCEEEEE-CC---------HHHHHHHHHHCCCEEEECCC----------------------------
T ss_conf             67889999987435326998-65---------69999988706984773364----------------------------


Q ss_pred             HCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             05898099980746886889999999879685111
Q gi|254780649|r  180 TTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTL  214 (216)
Q Consensus       180 ~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L  214 (216)
                                 .....||||+||++|.+|+++++|
T Consensus       125 -----------~~~~~ISST~IR~~i~~g~~~~~l  148 (181)
T 1ej2_A          125 -----------FYRDRYSGTEVRRRMLDDGDWRSL  148 (181)
T ss_dssp             -----------SSTTTSSHHHHHHHHHHTCCCGGG
T ss_pred             -----------CCCCCCCHHHHHHHHHCCCCHHHH
T ss_conf             -----------234667769999999859984797


No 12 
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=99.89  E-value=2.4e-22  Score=147.96  Aligned_cols=143  Identities=16%  Similarity=0.222  Sum_probs=85.5

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH-CCCCCCCCCHHHHHHHH
Q ss_conf             78998277897133899999999998629988999975899875556688999999998631-04753213425531000
Q gi|254780649|r   20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSL-IKNPRIRITAFEAYLNH   98 (216)
Q Consensus        20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~-~~~~~i~v~~~E~~~~~   98 (216)
                      ||| ||||||||+|+||+.+++.|.+.+  |+|+++|+..++.|.. ...+..+|..++..+ .......+..+|.....
T Consensus         1 M~i-ifgGsFdP~H~GHl~ii~~a~~~~--d~v~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (160)
T 1od6_A            1 MHV-VYPGSFDPLTNGHLDVIQRASRLF--EKVTVAVLENPSKRGQ-YLFSAEERLAIIREATAHLANVEAATFSGLLVD   76 (160)
T ss_dssp             CEE-EEEECCTTCCHHHHHHHHHHHHHS--SEEEEEEECC-----C-CSSCHHHHHHHHHHHTTTCTTEEEEEECSCHHH
T ss_pred             CEE-EEEECCCCCCHHHHHHHHHHHHHC--CEEEEECCCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             969-950257976899999999999879--9999952677775566-653689999999987753023333441001232


Q ss_pred             HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHHH
Q ss_conf             32899999972013678438961688135777776199999758989993899871432158999986325881233454
Q gi|254780649|r   99 TETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHIL  178 (216)
Q Consensus        99 syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (216)
                         ..+.     .+.........+.+.......|..+......-                                    
T Consensus        77 ---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------  112 (160)
T 1od6_A           77 ---FVRR-----VGAQAIVKGLRAVSDYEYELQMAHLNRQLYPG------------------------------------  112 (160)
T ss_dssp             ---HHHH-----TTCSEEEEEECTTSCHHHHHHHHHHHHHHTTT------------------------------------
T ss_pred             ---CCEE-----CCCEEEEECCCCHHHHHHHHHHHHHHHHHCCC------------------------------------
T ss_conf             ---1000-----14157886246779998750199999985789------------------------------------


Q ss_pred             HHCCCCEE-EEEECCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             20589809-9980746886889999999879685111
Q gi|254780649|r  179 CTTSPPSW-LFIHDRHHIISSTAIRKKIIEQDNTRTL  214 (216)
Q Consensus       179 ~~~~~~~~-~~i~~~~~~ISST~IR~~l~~~~~i~~L  214 (216)
                          ...+ .+.+....+||||.||+++++|+|+++|
T Consensus       113 ----~~~i~~~~~~~~~~ISST~IRe~i~~g~~i~~l  145 (160)
T 1od6_A          113 ----LETLFILAATRYSFVSSTMVKEIARYGGDVSKL  145 (160)
T ss_dssp             ----CEEEEEECCGGGTTCCHHHHHHHHHTTCCCTTT
T ss_pred             ----CCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHH
T ss_conf             ----888986458887753679999999849993586


No 13 
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural genomics, JCSG, protein structure initiative, PSI; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=99.89  E-value=2.9e-24  Score=159.02  Aligned_cols=146  Identities=16%  Similarity=0.217  Sum_probs=85.1

Q ss_pred             CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC-CCCCCCCHHHH
Q ss_conf             89987899827789713389999999999862998899997589987555668899999999863104-75321342553
Q gi|254780649|r   16 VEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIK-NPRIRITAFEA   94 (216)
Q Consensus        16 ~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~-~~~i~v~~~E~   94 (216)
                      .-..|| |||||||||||+||+.+|+.|.+.+  |+|+++|+..++.+   ...+..+|.+|++.... ...+.....+.
T Consensus         9 ~~~~Mk-aifgGsFdPiH~GHl~i~~~a~~~~--D~viv~~~~~~~~~---~~~~~~~r~~~~~~~~~~~~~~~~~~~~~   82 (173)
T 1vlh_A            9 HHHHMK-AVYPGSFDPITLGHVDIIKRALSIF--DELVVLVTENPRKK---CMFTLEERKKLIEEVLSDLDGVKVDVHHG   82 (173)
T ss_dssp             ----CE-EEEEECCTTCCHHHHHHHHHHHTTC--SEEEEEEECCTTCC---CSSCHHHHHHHHHHHTTTCTTEEEEEECS
T ss_pred             CCCCCE-EEEEECCCCCCHHHHHHHHHHHHHC--CEEEEEECCCCCCC---CCCCHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf             446426-9962347877799999999999869--99999503555678---77878899999986310221011001112


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHH
Q ss_conf             10003289999997201367843896168813577777619999975898999389987143215899998632588123
Q gi|254780649|r   95 YLNHTETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESL  174 (216)
Q Consensus        95 ~~~~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~  174 (216)
                      ... .+.+.    ..    ...  .....+      .|..+........+....|++..                     
T Consensus        83 ~~~-~~~~~----~~----~~~--~~~~~~------~~~~~~~~~~~~~~~~~~~~~~e---------------------  124 (173)
T 1vlh_A           83 LLV-DYLKK----HG----IKV--LVRGLR------AVTDYEYELQMALANKKLYSDLE---------------------  124 (173)
T ss_dssp             CHH-HHHHH----HT----CCE--EEEEEC------TTSCHHHHHHHHHHHHHHSTTCE---------------------
T ss_pred             CCH-HHHHH----HC----HHH--EEEECC------CCHHHHHHHHHHHHHHHHCCCCC---------------------
T ss_conf             101-47764----04----555--155136------73047888779999998679996---------------------


Q ss_pred             HHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             3454205898099980746886889999999879685111
Q gi|254780649|r  175 SHILCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTL  214 (216)
Q Consensus       175 ~~~~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L  214 (216)
                               ..+.+.+....+||||+||+++++|+++++|
T Consensus       125 ---------~i~l~~~~~~~~ISST~IR~~i~~g~~i~~l  155 (173)
T 1vlh_A          125 ---------TVFLIASEKFSFISSSLVKEVALYGGDVTEW  155 (173)
T ss_dssp             ---------EEEEECCGGGTTCCHHHHHHHHHTTCCCTTT
T ss_pred             ---------EEEECCCCCCCEECHHHHHHHHHCCCCHHHH
T ss_conf             ---------7730057676404599999999849995684


No 14 
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.88  E-value=7.5e-23  Score=150.91  Aligned_cols=140  Identities=14%  Similarity=0.189  Sum_probs=91.1

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCC-CCCCCHHHHHHHH
Q ss_conf             789982778971338999999999986299889999758998755566889999999986310475-3213425531000
Q gi|254780649|r   20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKNP-RIRITAFEAYLNH   98 (216)
Q Consensus        20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~~-~i~v~~~E~~~~~   98 (216)
                      || |+|||||||+|+||+.+++.|.+.+  |+|+++++..++.+.+....++++|.+|++.++.+. ...+...+...  
T Consensus         1 Mk-gi~~GsFdP~H~GH~~li~~a~~~~--d~v~v~~~~~~~~~~~~~~~~~~~R~~mi~~~~~~~~~~~~~~~~~~~--   75 (168)
T 1f9a_A            1 LR-GFIIGRFQPFHKGHLEVIKKIAEEV--DEIIIGIGSAQKSHTLENPFTAGERILMITQSLKDYDLTYYPIPIKDI--   75 (168)
T ss_dssp             CE-EEEEECCTTCCHHHHHHHHHHTTTC--SEEEEEECSTTCCSSSSCCSCHHHHHHHHHHHHTTSSCEEEEEECCCC--
T ss_pred             CE-EEEECCCCCCCHHHHHHHHHHHHHC--CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC--
T ss_conf             96-8995245989999999999999978--974898047860136788889999999999998767960898404664--


Q ss_pred             HHHHHHHHHHHCCCCCCCEEEECCCCC-HHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHH
Q ss_conf             328999999720136784389616881-3577777619999975898999389987143215899998632588123345
Q gi|254780649|r   99 TETFHTILQVKKHNKSVNFVWIMGADN-IKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHI  177 (216)
Q Consensus        99 syT~dtL~~lk~~~p~~~l~fiiG~D~-l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (216)
                      .+...+..++++..++..+.+  |.|. ...+..|.         ++-|..-+                           
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---------~~~v~~~~---------------------------  117 (168)
T 1f9a_A           76 EFNSIWVSYVESLTPPFDIVY--SGNPLVRVLFEER---------GYEVKRPE---------------------------  117 (168)
T ss_dssp             SCGGGHHHHHHHHSCCCSEEE--CCCHHHHHHHHHT---------TCEEECCC---------------------------
T ss_pred             CHHHHHHHHHHHHCCCEEEEE--CCCHHHHHHHHCC---------CCEEEEEC---------------------------
T ss_conf             207789999987258679998--7709999887648---------98699832---------------------------


Q ss_pred             HHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             4205898099980746886889999999879685111
Q gi|254780649|r  178 LCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTL  214 (216)
Q Consensus       178 ~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L  214 (216)
                                  ......||||+||+++++|++++++
T Consensus       118 ------------~~~~~~ISST~IR~~i~~g~~~~~~  142 (168)
T 1f9a_A          118 ------------MFNRKEYSGTEIRRRMLNGEKWEHL  142 (168)
T ss_dssp             ------------CCSTTTSSHHHHHHHHHHTCCCGGG
T ss_pred             ------------CCCCCCCCHHHHHHHHHCCCCHHHH
T ss_conf             ------------4466676679999999859986795


No 15 
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infectious disease, coenzyme A; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei 1710B} PDB: 3ikz_A*
Probab=99.88  E-value=5e-22  Score=146.16  Aligned_cols=143  Identities=18%  Similarity=0.227  Sum_probs=83.3

Q ss_pred             CCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH-HHCCCCCCCCCHHHHH
Q ss_conf             998789982778971338999999999986299889999758998755566889999999986-3104753213425531
Q gi|254780649|r   17 EPGMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQ-SLIKNPRIRITAFEAY   95 (216)
Q Consensus        17 ~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~-~~~~~~~i~v~~~E~~   95 (216)
                      +..||||||||||||||+||+.+++.|.+.+  |+|++++++.++.+...   ..+.+..+.. .+.....+.+...+..
T Consensus         2 ~~~M~IaifgGsFdP~H~GHl~ii~~a~~~~--D~v~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~   76 (170)
T 3k9w_A            2 PGSMVVAVYPGTFDPLTRGHEDLVRRASSIF--DTLVVGVADSRAKKPFF---SLEERLKIANEVLGHYPNVKVMGFTGL   76 (170)
T ss_dssp             -CCCCEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEEECCGGGCCSS---CHHHHHHHHHHHHTTCTTEEEEEESSC
T ss_pred             CCCCEEEEECCCCCCCCHHHHHHHHHHHHHC--CCCEEECCCCCCCCCCC---CHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             9873899958567988899999999999978--93427245554432235---699999999876520234443200344


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHC---CEEEEECCCCCHHHHCCHHHHHHHHCCCCH
Q ss_conf             00032899999972013678438961688135777776199999758---989993899871432158999986325881
Q gi|254780649|r   96 LNHTETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTV---PIAIIDRFDVTFNYISSPMAKTFEYARLDE  172 (216)
Q Consensus        96 ~~~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~---~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~  172 (216)
                      ....         .............+.+.......+..+.......   .+++.                         
T Consensus        77 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------------------------  122 (170)
T 3k9w_A           77 LKDF---------VRANDARVIVRGLRAVSDFEYEFQMAGMNRYLLPDVETMFMT-------------------------  122 (170)
T ss_dssp             HHHH---------HHHTTCSEEEEECCTTSCHHHHHHHHHHHHHHCTTCEEEEEC-------------------------
T ss_pred             CCCC---------CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEC-------------------------
T ss_conf             5320---------001352367772224137888878888778755575428830-------------------------


Q ss_pred             HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             233454205898099980746886889999999879685111
Q gi|254780649|r  173 SLSHILCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTL  214 (216)
Q Consensus       173 ~~~~~~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L  214 (216)
                                      .+....+||||+||+++++|+++++|
T Consensus       123 ----------------~~~~~~~ISST~IR~~i~~~~~i~~l  148 (170)
T 3k9w_A          123 ----------------PSDQYQFISGTIVREIAQLGGDVSKF  148 (170)
T ss_dssp             ----------------CCGGGTTCCHHHHHHHHHTTCCCTTT
T ss_pred             ----------------CCCCCCCCCHHHHHHHHHCCCCHHHH
T ss_conf             ----------------67787632879999999849993583


No 16 
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.88  E-value=7.7e-23  Score=150.82  Aligned_cols=142  Identities=20%  Similarity=0.293  Sum_probs=79.6

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCHHHHHHHH
Q ss_conf             789982778971338999999999986299889999758998755566889999999986310-4753213425531000
Q gi|254780649|r   20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLI-KNPRIRITAFEAYLNH   98 (216)
Q Consensus        20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~-~~~~i~v~~~E~~~~~   98 (216)
                      .|||||||||||||+||+.+|+.|.+.+  |+++++|++.+++|...   ..+.|..++..+. ...+..+...+... .
T Consensus         1 ~K~aifgGsFdPiH~GHl~ia~~a~~~~--d~~~v~~~~~~~~k~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   74 (158)
T 1qjc_A            1 QKRAIYPGTFDPITNGHIDIVTRATQMF--DHVILAIAASPSKKPMF---TLEERVALAQQATAHLGNVEVVGFSDLM-A   74 (158)
T ss_dssp             -CEEEEEECCTTCCHHHHHHHHHHHTTS--SEEEEEEESCCSSCCSS---CHHHHHHHHHHHTTTCTTEEEEEECSCH-H
T ss_pred             CCEEEECCCCCCCCHHHHHHHHHHHHHC--CCCEEEEECCCCCCCCC---CHHHHHHHHHHHHHHHCCCCCCCHHHHH-H
T ss_conf             9689980077988799999999999977--96679850553345557---7788899999974200254544201333-3


Q ss_pred             HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHHH
Q ss_conf             32899999972013678438961688135777776199999758989993899871432158999986325881233454
Q gi|254780649|r   99 TETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHIL  178 (216)
Q Consensus        99 syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (216)
                      .++..          ........+..+...+..+..+.......                                    
T Consensus        75 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------  108 (158)
T 1qjc_A           75 NFARN----------QHATVLIRGLRAVADFEYEMQLAHMNRHL------------------------------------  108 (158)
T ss_dssp             HHHHH----------TTCCEEEEECCTTCCHHHHHHHHHHHHHH------------------------------------
T ss_pred             HHHCC----------CCEEEEEECCCCCHHHHHHHHHHHHHHHH------------------------------------
T ss_conf             23003----------45289986022312678887899999875------------------------------------


Q ss_pred             HHCCCCEEEEE-ECCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             20589809998-0746886889999999879685111
Q gi|254780649|r  179 CTTSPPSWLFI-HDRHHIISSTAIRKKIIEQDNTRTL  214 (216)
Q Consensus       179 ~~~~~~~~~~i-~~~~~~ISST~IR~~l~~~~~i~~L  214 (216)
                       ......+.++ ..+..+||||+||+++++|+++++|
T Consensus       109 -~~~~~~~~~~~~~~~~~ISST~IR~~i~~g~~i~~l  144 (158)
T 1qjc_A          109 -MPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHF  144 (158)
T ss_dssp             -CTTSEEEEECCCGGGTTCCHHHHHHHHHTTCCCGGG
T ss_pred             -CCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHH
T ss_conf             -667653897479887615789999999859994595


No 17 
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A biosynthetic pathway, coenzyme A biosynthesis, cytoplasm, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus}
Probab=99.88  E-value=2e-22  Score=148.43  Aligned_cols=142  Identities=13%  Similarity=0.217  Sum_probs=83.8

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCHHHHHHHH
Q ss_conf             789982778971338999999999986299889999758998755566889999999986310-4753213425531000
Q gi|254780649|r   20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLI-KNPRIRITAFEAYLNH   98 (216)
Q Consensus        20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~-~~~~i~v~~~E~~~~~   98 (216)
                      .+||||||||||||+||+.+++.|.+.+  |++++++++.+..+   ...++..|.+|.+.+. ..+++.|++.+..   
T Consensus         3 ~~IgifgGsFdPiH~GHl~i~~~a~~~~--d~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---   74 (168)
T 3f3m_A            3 HTIAVIPGSFDPITYGHLDIIERSTDRF--DEIHVCVLKNSKKE---GTFSLEERMDLIEQSVKHLPNVKVHQFSGL---   74 (168)
T ss_dssp             CCEEEEEECCTTCCHHHHHHHHHHGGGS--SEEEEEECC--------CCSCHHHHHHHHHHHTTTCTTEEEEECCSC---
T ss_pred             CCEEEECCCCCCCCHHHHHHHHHHHHHC--CCCEECCCCCCCCC---CCCCHHHHHHHHHHHHCCCCCEEEEECCCC---
T ss_conf             6489975146887799999999999868--95415334786555---557898999999986445797699842665---


Q ss_pred             HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHHH
Q ss_conf             32899999972013678438961688135777776199999758989993899871432158999986325881233454
Q gi|254780649|r   99 TETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHIL  178 (216)
Q Consensus        99 syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (216)
                        +++...   +.............+.+.....|..+......                                     
T Consensus        75 --~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------  112 (168)
T 3f3m_A           75 --LVDYCE---QVGAKTIIRGLRAVSDFEYELRLTSMNKKLNN-------------------------------------  112 (168)
T ss_dssp             --HHHHHH---HHTCCEEEEEECTTCCHHHHHHHHHHHHHHCT-------------------------------------
T ss_pred             --CCHHHH---HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-------------------------------------
T ss_conf             --402255---52543100132351378888889999887576-------------------------------------


Q ss_pred             HHCCCCEEEE-EECCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             2058980999-80746886889999999879685111
Q gi|254780649|r  179 CTTSPPSWLF-IHDRHHIISSTAIRKKIIEQDNTRTL  214 (216)
Q Consensus       179 ~~~~~~~~~~-i~~~~~~ISST~IR~~l~~~~~i~~L  214 (216)
                         ....+++ ......+||||+||+++++|+++++|
T Consensus       113 ---~~~~i~~~~~~~~~~ISST~IRe~i~~g~~i~~~  146 (168)
T 3f3m_A          113 ---EIETLYMMSSTNYSFISSSIVKEVAAYRADISEF  146 (168)
T ss_dssp             ---TSEEEEEECCTTTTTCCHHHHHHHHHTTCCCTTT
T ss_pred             ---CCCEEECCCCCCCCCCCHHHHHHHHHCCCCHHHH
T ss_conf             ---7647840467677602589999999849995696


No 18 
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=99.86  E-value=3.4e-21  Score=141.31  Aligned_cols=59  Identities=25%  Similarity=0.389  Sum_probs=49.6

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf             7899827789713389999999999862998899997589987555668899999999863104
Q gi|254780649|r   20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIK   83 (216)
Q Consensus        20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~   83 (216)
                      .+||||||||||||+||+.+++.|++.+  |+|+++|+..++.+.   ..+.+.|..|++....
T Consensus         2 ~~IgifgGsFdPiH~GHl~l~~~a~~~~--D~v~v~~~~~~~~~~---~~~~~~~~~~~~~~~~   60 (169)
T 1o6b_A            2 ASIAVCPGSFDPVTYGHLDIIKRGAHIF--EQVYVCVLNNSSKKP---LFSVEERCELLREVTK   60 (169)
T ss_dssp             CCEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEECCCCSSCC---SSCHHHHHHHHHHHHT
T ss_pred             CEEEEEEECCCCCCHHHHHHHHHHHHHC--CEEEECCCCCCCCCC---CCCHHHHHHHHHHHHH
T ss_conf             8289982256857799999999999879--986871234556677---7898999999999862


No 19 
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=99.74  E-value=2.2e-19  Score=130.94  Aligned_cols=114  Identities=14%  Similarity=0.113  Sum_probs=81.0

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC-CCCCCCCHHHHHHHH
Q ss_conf             7899827789713389999999999862998899997589987555668899999999863104-753213425531000
Q gi|254780649|r   20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIK-NPRIRITAFEAYLNH   98 (216)
Q Consensus        20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~-~~~i~v~~~E~~~~~   98 (216)
                      |||++ ||||||+|.||+.+++.|++.++.+.|+++++..++.++.....+.++|.+|++.... .+.+.+...+.....
T Consensus         1 MkV~l-gG~FD~~H~GH~~ll~~A~~~~~~~~i~~~~~~~~~~~k~~~~~~~~~R~~~l~~~~~~~~~~~~~~~~~~~~~   79 (148)
T 3do8_A            1 MKVAL-GGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARARIRSVLPFAIRAENVKRYVMRKYGFEPEIVKITNPY   79 (148)
T ss_dssp             CCEEE-EECCSSCCHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHSCCCSCHHHHHHHHHHHHHHHHSSCCEEEEECSTT
T ss_pred             CEEEE-ECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
T ss_conf             98999-36738848899999999998489729970278456520000000057899999976442467421110011034


Q ss_pred             HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCE
Q ss_conf             3289999997201367843896168813577777619999975898
Q gi|254780649|r   99 TETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPI  144 (216)
Q Consensus        99 syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~i  144 (216)
                      ..       ..+.  + .-++++|.|...+.+.|.+....-....+
T Consensus        80 ~~-------~~~~--~-~~~~v~g~d~~~~~~~~~~~~~~~~~~~~  115 (148)
T 3do8_A           80 GK-------TLDV--D-FEYLVVSPETYEMALKINQKREELGKRKI  115 (148)
T ss_dssp             TT-------TTTS--C-CSEEEECTTTHHHHHHHHHHHHHHTCCCC
T ss_pred             HH-------HHHC--C-CCEEEECCEEECCHHHHHHHHHHCCCCCC
T ss_conf             45-------6535--8-86777766785567888547987188763


No 20 
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide kinase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=99.68  E-value=3.8e-18  Score=123.74  Aligned_cols=63  Identities=27%  Similarity=0.422  Sum_probs=51.5

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC-------CCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf             78998277897133899999999998629988999975899-------875556688999999998631047
Q gi|254780649|r   20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFN-------SVKNYNLSSSLEKRISLSQSLIKN   84 (216)
Q Consensus        20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~-------p~K~~~~~~~~~~R~~m~~~~~~~   84 (216)
                      -||||+||+|||+|.||+.+++.|.+.+  |+++++++..+       +.+......+.++|++|++.+..+
T Consensus         2 Kkigv~iG~FDpvH~GH~~li~~A~~~~--d~l~vvi~~~~~~~~~~~~~~~~~~~~~~~~R~~~l~~~~~~   71 (365)
T 1lw7_A            2 KKVGVIFGKFYPVHTGHINMIYEAFSKV--DELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFKY   71 (365)
T ss_dssp             CCEEEEEECCSSCCHHHHHHHHHHHTTC--SEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTST
T ss_pred             CCEEEEEEECCCCCHHHHHHHHHHHHHC--CCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf             7389998726987889999999999967--986899985798653346554546689999999999984777


No 21 
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.62  E-value=1.2e-15  Score=109.27  Aligned_cols=60  Identities=27%  Similarity=0.354  Sum_probs=47.9

Q ss_pred             C-EEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE-C-CCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf             7-899827789713389999999999862998899997-5-89987555668899999999863104
Q gi|254780649|r   20 M-KIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWII-T-PFNSVKNYNLSSSLEKRISLSQSLIK   83 (216)
Q Consensus        20 m-kIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ip-s-~~~p~K~~~~~~~~~~R~~m~~~~~~   83 (216)
                      | ++|||+|+|+|+|+||+.+++.|.+.+  |+|++++ | ..++-+  ....++++|.+|++.++.
T Consensus         6 ~~~~~v~~GrFqP~H~GH~~~i~~a~~~~--d~viv~vgs~~~~~~~--~nPft~~eR~~mi~~~l~   68 (352)
T 2qjt_B            6 MYDISVFIGRFQPFHKGHLHNIIIALQNS--KKVIINIGSCFNTPNI--KNPFSFEQRKQMIESDLQ   68 (352)
T ss_dssp             CEEEEEEEECCTTCCHHHHHHHHHHHHSE--EEEEEEEEEESCCCCS--SSCSCHHHHHHHHHHHHH
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHCC--CEEEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHH
T ss_conf             56689999635998778999999998559--9699999469988887--899899999999999988


No 22 
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCSG, protein structure initiative; 1.91A {Methanocaldococcus jannaschii DSM2661}
Probab=99.50  E-value=4.9e-13  Score=94.27  Aligned_cols=182  Identities=11%  Similarity=-0.070  Sum_probs=93.6

Q ss_pred             CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC--CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             87899827789713389999999999862998899997589987--5556688999999998631047532134255310
Q gi|254780649|r   19 GMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSV--KNYNLSSSLEKRISLSQSLIKNPRIRITAFEAYL   96 (216)
Q Consensus        19 ~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~--K~~~~~~~~~~R~~m~~~~~~~~~i~v~~~E~~~   96 (216)
                      .+||+-.-|.|||+|+||+.+++++++   -|.++.|+|+....  +..+...+..+|++|+..+..+--++........
T Consensus        51 ~~ki~~i~~EyNPFHnGHlylie~ak~---~d~iI~VmSgnfvQ~~RGepai~~k~~Ra~mAl~~GaDlViELP~~~~~~  127 (357)
T 3gmi_A           51 KDKIVCDFTEYNPLHKGHKYALEKGKE---HGIFISVLPGPLERSGRGIPYFLNRYIRAEMAIRAGADIVVEGPPMGIMG  127 (357)
T ss_dssp             CCCEEEEECCCTTCCHHHHHHHHHHHT---SSEEEEEECCTTSBCTTSSBCSSCHHHHHHHHHHHTCSEEEECCCGGGSC
T ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHH---CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCEEEEC
T ss_conf             682899987328986789999999985---59989996898655566774439999999999982888464367536744


Q ss_pred             HHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEE-----ECC-CCC----HHHHCCHHHHHHH
Q ss_conf             003289999997201367843896168813577777619999975898999-----389-987----1432158999986
Q gi|254780649|r   97 NHTETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAII-----DRF-DVT----FNYISSPMAKTFE  166 (216)
Q Consensus        97 ~~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~-----~R~-g~~----~~~~~~~~~~~~~  166 (216)
                      ...|..-.+.-+..... ..++|....+...    +.--+.+....++...     ... +..    ....+..++....
T Consensus       128 sa~Fa~~aV~ll~~lg~-d~l~FG~e~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~iL~~~~i  202 (357)
T 3gmi_A          128 SGQYMRCLIKMFYSLGA-EIIPRGYIPEKTM----EKVIDCINKGYHIQVKPYKIICIETGEILGEKLNIDNYVIASMSQ  202 (357)
T ss_dssp             HHHHHHHHHHHHHHHTC-CEEEEEECCCHHH----HHHHHHHHTTCCEEEETTEEEETTTCCEEESCCCGGGHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHCCC-CEEECCCCCHHHH----HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             27889889888887297-5220158882799----999999985077376899998865207788887558999755526


Q ss_pred             HCCCCHHHHHHHHHCCCCEEEEEECC-CCCCCHHHHHHHHHCCC--CCCCC
Q ss_conf             32588123345420589809998074-68868899999998796--85111
Q gi|254780649|r  167 YARLDESLSHILCTTSPPSWLFIHDR-HHIISSTAIRKKIIEQD--NTRTL  214 (216)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~ISST~IR~~l~~~~--~i~~L  214 (216)
                      ..     .. ............+... ...+|||.||++|++|+  +++++
T Consensus       203 ~~-----~~-i~R~~~~~~~~~i~~~~~~~~SAT~IR~~i~~g~~e~i~~~  247 (357)
T 3gmi_A          203 MI-----YK-LNREGLKFNPKFVFVKRLEGISGTKIREAIFSGKFEDIKNM  247 (357)
T ss_dssp             HH-----HH-HHHTTCCCCCEEEEEECSCCCCHHHHHHHHHTTCGGGTGGG
T ss_pred             CE-----EE-HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHH
T ss_conf             54-----41-11211568863123665451169999999985887799873


No 23 
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.45  E-value=1.1e-13  Score=98.03  Aligned_cols=93  Identities=22%  Similarity=0.186  Sum_probs=61.8

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCC--CCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             789982778971338999999999986299889999758998--755566889999999986310475321342553100
Q gi|254780649|r   20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNS--VKNYNLSSSLEKRISLSQSLIKNPRIRITAFEAYLN   97 (216)
Q Consensus        20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p--~K~~~~~~~~~~R~~m~~~~~~~~~i~v~~~E~~~~   97 (216)
                      ||..+.+|+|||+|.||+.+.+.|.+..  |.+++..+..+.  .|++....+.++|.++++++-.-+.+.+.+.     
T Consensus         1 MK~V~~~G~FD~lH~GHi~~l~~Ak~~g--d~liV~v~~D~~~~~~k~~p~~~~~~R~~~l~~l~~Vd~v~~~~~-----   73 (132)
T 2b7l_A            1 MKRVITYGTYDLLHYGHIELLRRAREMG--DYLIVALSTDEFNQIKHKKSYYDYEQRKMMLESIRYVDLVIPEKG-----   73 (132)
T ss_dssp             CCEEEEEECCCSCCHHHHHHHHHHHHTS--SEEEEEEECHHHHHHTTCCCSSCHHHHHHHHHTBTTCCEEEEECC-----
T ss_pred             CCEEEEEEEECCCCHHHHHHHHHHHHHC--CEEEEEEECCHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEECC-----
T ss_conf             9399992267889989999999999729--999999816556553148885608999877400577889998045-----


Q ss_pred             HHHHHHHHHHHHCCCCCCCEEEECCCCC
Q ss_conf             0328999999720136784389616881
Q gi|254780649|r   98 HTETFHTILQVKKHNKSVNFVWIMGADN  125 (216)
Q Consensus        98 ~syT~dtL~~lk~~~p~~~l~fiiG~D~  125 (216)
                      ..++.+.+   ++..|+   +++.|.|.
T Consensus        74 ~~~~~~~i---~~~~~d---~~v~G~d~   95 (132)
T 2b7l_A           74 WGQKEDDV---EKFDVD---VFVMGHDW   95 (132)
T ss_dssp             GGGHHHHH---HHTTCC---EEEECGGG
T ss_pred             CCCHHHHH---HHHCCC---EEEECCCC
T ss_conf             22469999---972997---99985886


No 24 
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.37  E-value=9.8e-13  Score=92.53  Aligned_cols=93  Identities=25%  Similarity=0.235  Sum_probs=61.1

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC--CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             7899827789713389999999999862998899997589987--55566889999999986310475321342553100
Q gi|254780649|r   20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSV--KNYNLSSSLEKRISLSQSLIKNPRIRITAFEAYLN   97 (216)
Q Consensus        20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~--K~~~~~~~~~~R~~m~~~~~~~~~i~v~~~E~~~~   97 (216)
                      ||..+.+|+|||+|.||+.+.+.|.+..  |++++..+..+..  +++....+.++|.++++++-.-..+.+.+     +
T Consensus         1 Mk~V~~~G~FD~lH~GH~~~l~~Ak~~g--d~liV~v~~D~~~~~~k~~pi~~~~eR~~~l~~l~~Vd~v~~~~-----~   73 (129)
T 1coz_A            1 MKKVITYGTFDLLHWGHIKLLERAKQLG--DYLVVAISTDEFNLQKQKKAYHSYEHRKLILETIRYVDEVIPEK-----N   73 (129)
T ss_dssp             CCEEEEEECCCSCCHHHHHHHHHHHTTS--SEEEEEEECHHHHHHHTCCCSSCHHHHHHHHTTBTTCCEEEEEC-----C
T ss_pred             CCEEEEEEEECCCCHHHHHHHHHHHHHC--CEEEEEEECCCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEC-----C
T ss_conf             9399993454879989999999999729--98999970671020589988789999999986525878899737-----8


Q ss_pred             HHHHHHHHHHHHCCCCCCCEEEECCCCC
Q ss_conf             0328999999720136784389616881
Q gi|254780649|r   98 HTETFHTILQVKKHNKSVNFVWIMGADN  125 (216)
Q Consensus        98 ~syT~dtL~~lk~~~p~~~l~fiiG~D~  125 (216)
                      ..++.+.   +++..|+   +++.|.|.
T Consensus        74 ~~~~~~~---i~~~~~d---~~v~g~d~   95 (129)
T 1coz_A           74 WEQKKQD---IIDHNID---VFVMGDDW   95 (129)
T ss_dssp             STTHHHH---HHHTTCS---EEEEEGGG
T ss_pred             CCCCHHH---HHHCCCC---EEEECCCC
T ss_conf             5537888---8523996---99987874


No 25 
>3glv_A Lipopolysaccharide core biosynthesis protein; structural genomics, PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.28  E-value=4.2e-12  Score=88.89  Aligned_cols=93  Identities=20%  Similarity=0.224  Sum_probs=51.4

Q ss_pred             CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC--CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             878998277897133899999999998629988999975899--875556688999999998631047532134255310
Q gi|254780649|r   19 GMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFN--SVKNYNLSSSLEKRISLSQSLIKNPRIRITAFEAYL   96 (216)
Q Consensus        19 ~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~--p~K~~~~~~~~~~R~~m~~~~~~~~~i~v~~~E~~~   96 (216)
                      ||+-.+.+|+|||+|.||+.+.+.|.+..  +.+.......+  +.+........+.|..++........+...      
T Consensus         1 ~M~rV~~~G~FD~~H~GH~~ll~~Ak~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------   72 (143)
T 3glv_A            1 GMIRVMATGVFDILHLGHIHYLKESKKLG--DELVVVVARDSTARNNGKIPIFDENSRLALISELKVVDRAILG------   72 (143)
T ss_dssp             CCCEEEEEECCSSCCHHHHHHHHHHHTTS--SEEEEEECCHHHHHHTTCCCSSCHHHHHHHHTTBTTCSEEEEC------
T ss_pred             CCEEEEEEEEECCCCHHHHHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEE------
T ss_conf             97899998578999899999999998709--8223222357400023322006899999862245540489974------


Q ss_pred             HHHHHHHHHHHHHCCCCCCCEEEECCCCC
Q ss_conf             00328999999720136784389616881
Q gi|254780649|r   97 NHTETFHTILQVKKHNKSVNFVWIMGADN  125 (216)
Q Consensus        97 ~~syT~dtL~~lk~~~p~~~l~fiiG~D~  125 (216)
                      ......+.+..+   .++   +++.|.|-
T Consensus        73 ~~~~~~~~~~~~---~~~---~~v~G~D~   95 (143)
T 3glv_A           73 HEGDMMKTVIEV---KPD---IITLGYDQ   95 (143)
T ss_dssp             CTTCHHHHHHHH---CCS---EEEECTTC
T ss_pred             CCHHHHHHHHHH---CCC---EEEECCCC
T ss_conf             114677899996---999---89977875


No 26 
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=98.93  E-value=3.4e-09  Score=72.13  Aligned_cols=65  Identities=17%  Similarity=0.192  Sum_probs=33.1

Q ss_pred             CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE--CCCC---CCCCC-CCCCCHHHHHHHHHHH
Q ss_conf             789987899827789713389999999999862998899997--5899---87555-6688999999998631
Q gi|254780649|r   15 KVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWII--TPFN---SVKNY-NLSSSLEKRISLSQSL   81 (216)
Q Consensus        15 ~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ip--s~~~---p~K~~-~~~~~~~~R~~m~~~~   81 (216)
                      ...+++||+.-.|+||++|.||+.+.+.|.+..  |+.++++  ....   ..|.+ ....+.++|..+++++
T Consensus       193 ~~~~~~kivyv~G~FDl~H~GHi~~L~~Ak~~g--d~~~LIVgv~sD~~v~~~Kg~~~Pi~~~~eR~~~v~~~  263 (341)
T 3elb_A          193 EPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLA--ERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSVLAC  263 (341)
T ss_dssp             CCCTTCEEEEEEECCTTCCHHHHHHHHHHHTTS--SSEEEEEEEECHHHHHHHHCTTCCSSCHHHHHHHHHTB
T ss_pred             CCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHC--CCCEEEEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHC
T ss_conf             889898499993335256625999999999729--98626999966488996349999989999999999703


No 27 
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=98.90  E-value=2.9e-09  Score=72.55  Aligned_cols=130  Identities=16%  Similarity=0.059  Sum_probs=72.7

Q ss_pred             HHHEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC---CCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf             232021677899878998277897133899999999998629988999975899---87555668899999999863104
Q gi|254780649|r    7 LQDIMRMPKVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFN---SVKNYNLSSSLEKRISLSQSLIK   83 (216)
Q Consensus         7 ~~~~~~~p~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~---p~K~~~~~~~~~~R~~m~~~~~~   83 (216)
                      +.-..+-++.++++|| .=-|+||++|.||+.+.+.|.+.+.-+.+++.++...   ..|.. ...+.++|..++..+..
T Consensus        64 ~~~~~~~~~~~~~~rV-yv~G~FDLfH~GHi~lL~~AK~l~~gd~LIVGV~sDe~i~k~Kg~-pi~~~~eR~~~l~~~r~  141 (236)
T 3hl4_A           64 MEEACRGTPCERPVRV-YADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGF-TVMNENERYDAVQHCRY  141 (236)
T ss_dssp             HHHHHHCCCTTSCEEE-EEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHTCC-CSSCHHHHHHHHHTBTT
T ss_pred             HHHHHHCCCCCCCEEE-EEECEECCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCCC-CCCCHHHHHHHHHHCCC
T ss_conf             9998526887899599-994515888989999999996059989899997778999856999-99999999998652145


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEC
Q ss_conf             753213425531000328999999720136784389616881357777761999997589899938
Q gi|254780649|r   84 NPRIRITAFEAYLNHTETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDR  149 (216)
Q Consensus        84 ~~~i~v~~~E~~~~~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R  149 (216)
                      -..+.+.+     +..++.+.+   ++..++   +++.|.|..........++.+-+...++.++|
T Consensus       142 VD~VI~~~-----p~~~~~~~l---~~~~~d---~vv~gdd~~~~~~~~~~~~~~k~~g~~~~i~r  196 (236)
T 3hl4_A          142 VDEVVRNA-----PWTLTPEFL---AEHRID---FVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQR  196 (236)
T ss_dssp             CSEEESSC-----CSSCCHHHH---HHTTCC---EEEEESSCCCCSSCSCTTHHHHHTTCEEEECC
T ss_pred             CCCCCCCC-----CCCCCHHHH---HHHCCC---EEEECCCCCCCCCCHHHHHHHHHCCEEEEECC
T ss_conf             53522489-----855629999---872997---89868964427771559999873899999789


No 28 
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=98.86  E-value=5.9e-09  Score=70.74  Aligned_cols=119  Identities=16%  Similarity=0.108  Sum_probs=65.3

Q ss_pred             CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC---CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHH
Q ss_conf             899878998277897133899999999998629988999975899---87555668899999999863104753213425
Q gi|254780649|r   16 VEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFN---SVKNYNLSSSLEKRISLSQSLIKNPRIRITAF   92 (216)
Q Consensus        16 ~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~---p~K~~~~~~~~~~R~~m~~~~~~~~~i~v~~~   92 (216)
                      .++++|| .-.|+||++|.||+.+.+.|.+..  |++++.++...   ..|. ....+.++|++|++++---..+.+.. 
T Consensus         4 ~~~~~rV-~~~G~FDl~H~GH~~~l~~Ak~~g--d~LiVgv~sD~~i~~~Kg-~Pv~~~~eR~~~v~~~k~VD~Vi~~~-   78 (341)
T 3elb_A            4 GRRAVRV-WCDGCYDMVHYGHSNQLRQARAMG--DYLIVGVHTDEEIAKHKG-PPVFTQEERYKMVQAIKWVDEVVPAA-   78 (341)
T ss_dssp             CCCCCEE-EEEECCCSCCHHHHHHHHHHHHTS--SEEEEEECCHHHHHHHSS-CCSSCHHHHHHHHHHBTTCCEEEETC-
T ss_pred             CCCCEEE-EEEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHCCC-CCCCCHHHHHHHHHCCCCCCEEEECC-
T ss_conf             9886699-993135778989999999999739--989999835699985599-99899999999997356887899668-


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEC
Q ss_conf             531000328999999720136784389616881357777761999997589899938
Q gi|254780649|r   93 EAYLNHTETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDR  149 (216)
Q Consensus        93 E~~~~~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R  149 (216)
                          +...+.+.   +++..|+   +++.|.|.-.+......++++-....+.+++|
T Consensus        79 ----~~~~~~~~---l~~~~~d---~vv~GdD~~~~~~~~~~~~~~k~~g~~~~~~r  125 (341)
T 3elb_A           79 ----PYVTTLET---LDKYNCD---FCVHGNDITLTVDGRDTYEEVKQAGRYRECKR  125 (341)
T ss_dssp             ----CSSCCHHH---HHHTTCS---EEEECSCCCBCTTSCBTTHHHHHTTCEEECCC
T ss_pred             ----CCCCHHHH---HHHHCCC---EEEECCCCCCCCCCHHHHHHHHCCCEEEEECC
T ss_conf             ----86257999---9986999---99988816567774127799980998998147


No 29 
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-binding, multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=98.55  E-value=1.5e-06  Score=56.84  Aligned_cols=113  Identities=16%  Similarity=0.216  Sum_probs=60.2

Q ss_pred             ECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH---CCCCEEEEEECCC-----CCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf             16778998789982778971338999999999986---2998899997589-----987555668899999999863104
Q gi|254780649|r   12 RMPKVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKK---LNLDQLWWIITPF-----NSVKNYNLSSSLEKRISLSQSLIK   83 (216)
Q Consensus        12 ~~p~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~---l~ld~v~~ips~~-----~p~K~~~~~~~~~~R~~m~~~~~~   83 (216)
                      ..|..-++.-++|  |.||=+|.||..+.+.+.+.   .++.-+.+.-.+.     .|.+....+.+.++|.++++..--
T Consensus         9 ~ip~~~~~svvtI--G~FDGvHlGHq~Li~~~~~~A~~~~~~~~viTF~phP~~~~~~~~~~~~l~~~~ek~~~l~~~gi   86 (338)
T 2x0k_A            9 AVPKDLDNSAVTI--GVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESFGI   86 (338)
T ss_dssp             GSCTTCCCEEEEE--SCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHTTC
T ss_pred             HCCCCCCCCEEEE--ECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf             7784469919999--72733248999999999999997299889999459899980976775012457999999875499


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHH
Q ss_conf             753213425531000328999999720136784389616881357
Q gi|254780649|r   84 NPRIRITAFEAYLNHTETFHTILQVKKHNKSVNFVWIMGADNIKS  128 (216)
Q Consensus        84 ~~~i~v~~~E~~~~~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~  128 (216)
                      + .+.+-++..+......-+=+..+....-+.. .+++|.|--..
T Consensus        87 d-~~~~i~F~~~~a~ls~e~Fi~~il~~~l~~k-~ivvG~Df~FG  129 (338)
T 2x0k_A           87 D-GVLVIDFTRELSGTSPEKYVEFLLEDTLHAS-HVVVGANFTFG  129 (338)
T ss_dssp             S-EEEEECTTTSSSSCCHHHHHHHCCCCCTCEE-EEEEETTCEES
T ss_pred             C-EEEEECHHHHHHCCCHHHHHHHHHHHHCCCE-EEEEECCCCCC
T ss_conf             8-8999502787632798889999987303733-99994554443


No 30 
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel, nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=98.27  E-value=1.1e-05  Score=51.98  Aligned_cols=58  Identities=19%  Similarity=0.275  Sum_probs=38.6

Q ss_pred             EEEECCCCCCCCHHHHHHHHHHHHHC---CCCEEEEEECCCCCC----CCCCCCCCHHHHHHHHHHHC
Q ss_conf             99827789713389999999999862---998899997589987----55566889999999986310
Q gi|254780649|r   22 IGLFGGNFNPPHHGHIEIAQIAIKKL---NLDQLWWIITPFNSV----KNYNLSSSLEKRISLSQSLI   82 (216)
Q Consensus        22 IgifGGSFdPiH~gHl~ia~~~~~~l---~ld~v~~ips~~~p~----K~~~~~~~~~~R~~m~~~~~   82 (216)
                      ++|  |+||=+|.||..+.+.+.+..   ++.-+.+.-.+ +|.    +......+.++|+.+++...
T Consensus         3 vaI--G~FDGvH~GHq~Li~~~~~~a~~~~~~~~v~tf~~-~p~~~~~~~~~~l~~~~~r~~~l~~~g   67 (293)
T 1mrz_A            3 VSI--GVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISY-PPEYFLPDFPGLLMTVESRVEMLSRYA   67 (293)
T ss_dssp             EEE--ECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESS-CGGGGSTTCCCBSSCHHHHHHHHTTTS
T ss_pred             EEE--ECCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC-CHHHHCCCCCCCCCCHHHHHHHHHHHC
T ss_conf             999--50620138999999999999997099969999596-979969999401489999999998728


No 31 
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=98.07  E-value=1.1e-05  Score=51.89  Aligned_cols=99  Identities=19%  Similarity=0.151  Sum_probs=51.0

Q ss_pred             CCEEEEECCCCCCCCHHHHHHHHHHHHHCCC---CEEEEE--ECCC---CCCCCC--CCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf             8789982778971338999999999986299---889999--7589---987555--66889999999986310475321
Q gi|254780649|r   19 GMKIGLFGGNFNPPHHGHIEIAQIAIKKLNL---DQLWWI--ITPF---NSVKNY--NLSSSLEKRISLSQSLIKNPRIR   88 (216)
Q Consensus        19 ~mkIgifGGSFdPiH~gHl~ia~~~~~~l~l---d~v~~i--ps~~---~p~K~~--~~~~~~~~R~~m~~~~~~~~~i~   88 (216)
                      +.-++|  |.||=+|.||-.+.+.+.+.-.-   .-+.+.  |.|.   .|....  ....+.++|.++++..- -+.+.
T Consensus        21 ~sVvtI--G~FDGvHlGHq~li~~~~~~a~~~~~~~~v~TF~phP~~~~~~~~~~~~~~l~~~~ek~~~l~~~G-id~~~   97 (308)
T 3op1_A           21 DSVVVL--GYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKREG-VEELY   97 (308)
T ss_dssp             CEEEEE--SCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHHT-CCEEE
T ss_pred             CCEEEE--ECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCHHCCCCCHHHHHHHHHHCC-CCEEE
T ss_conf             949999--717211189999999999999981997899976799899839678523112589899999998729-97899


Q ss_pred             CCHHHH---HHHHHHHHHHHHHHHCCCCCCCEEEECCCCC
Q ss_conf             342553---1000328999999720136784389616881
Q gi|254780649|r   89 ITAFEA---YLNHTETFHTILQVKKHNKSVNFVWIMGADN  125 (216)
Q Consensus        89 v~~~E~---~~~~syT~dtL~~lk~~~p~~~l~fiiG~D~  125 (216)
                      +-++..   ...+...++.   |.+... .. ..++|.|-
T Consensus        98 ~~~F~~~~a~ls~e~Fi~~---L~~~l~-~~-~ivvG~DF  132 (308)
T 3op1_A           98 LLDFSSQFASLTAQEFFAT---YIKAMN-AK-IIVAGFDY  132 (308)
T ss_dssp             EECCCHHHHTCCHHHHHHH---HHHHHT-EE-EEEEETTC
T ss_pred             EEECCHHHHHCCHHHHHHH---HHHHCC-CC-EEEECCCC
T ss_conf             9846888850899999999---998558-88-99988885


No 32 
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=97.81  E-value=0.00016  Score=45.12  Aligned_cols=163  Identities=15%  Similarity=0.181  Sum_probs=86.5

Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHC----CCCCCCCCHHHHHH
Q ss_conf             89982778971338999999999986299889999758998755566889999999986310----47532134255310
Q gi|254780649|r   21 KIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLI----KNPRIRITAFEAYL   96 (216)
Q Consensus        21 kIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~----~~~~i~v~~~E~~~   96 (216)
                      +|.=|= |=||+|.||..+.+.+++.++-|-+++.|... +.|.  +-.+..-|+.-.+.++    ...++.++.+....
T Consensus       194 ~VvaFq-TRNp~Hr~He~l~~~al~~~~~~~lli~p~~G-~~k~--~d~~~~~r~~~~~~~~~~~~~~~~~~l~~l~~~m  269 (396)
T 1jhd_A          194 KVVAFQ-TRNPMHRAHEELCRMAMESLDADGVVVHMLLG-KLKK--GDIPAPVRDAAIRTMAEVYFPPNTVMVTGYGFDM  269 (396)
T ss_dssp             SEEEEE-ESSCCCHHHHHHHHHHHHHHTCSEEEEEEEEC-CCCT--TCCCHHHHHHHHHHHHHHHSCTTCEEEEEEECCC
T ss_pred             EEEEEE-ECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEC-CCCC--CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
T ss_conf             677764-26889758999999999971578379854433-5878--7789899999999998623898755998435653


Q ss_pred             ---HHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHH---HHHHHHHHHC------CEEEEECCC--CCHHHHCCHHH
Q ss_conf             ---003289999997201367843896168813577777---6199999758------989993899--87143215899
Q gi|254780649|r   97 ---NHTETFHTILQVKKHNKSVNFVWIMGADNIKSFHQW---HHWKRIVTTV------PIAIIDRFD--VTFNYISSPMA  162 (216)
Q Consensus        97 ---~~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W---~~~~~ll~~~------~iiV~~R~g--~~~~~~~~~~~  162 (216)
                         |+.-.+  +.++-.++=+++ .||+|-|- .+....   +..++|++..      .|-++.=++  |..+ .     
T Consensus       270 ~yAGPrEa~--~hAiir~N~Gct-hfivGRDH-AG~g~~Y~~~~aq~i~~~~~~e~~l~I~i~~~~~~~Yc~~-c-----  339 (396)
T 1jhd_A          270 LYAGPREAV--LHAYFRQNMGAT-HFIIGRDH-AGVGDYYGAFDAQTIFDDEVPEGAMEIEIFRADHTAYSKK-L-----  339 (396)
T ss_dssp             CCCTHHHHH--HHHHHHHHTTCS-EEEECTTT-TCCTTCSCTTHHHHHHHHTSCTTSCSCEEEECCCEEEETT-T-----
T ss_pred             CCCCCHHHH--HHHHHHHHCCCC-EEEECCCC-CCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCEEEECC-C-----
T ss_conf             457854888--999999866984-16535777-7633358916678998712676787438997365299877-8-----


Q ss_pred             HHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCC
Q ss_conf             9986325881233454205898099980746886889999999879685
Q gi|254780649|r  163 KTFEYARLDESLSHILCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNT  211 (216)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i  211 (216)
                         .......     -+....      ......||.|++|++|++|+.+
T Consensus       340 ---~~~~~~~-----~~p~~~------~~~~~~iSGt~~r~~l~~g~~p  374 (396)
T 1jhd_A          340 ---NKIVMMR-----DVPDHT------KEDFVLLSGTKVREMLGQGIAP  374 (396)
T ss_dssp             ---TEEEEGG-----GCTTCC------GGGEECCCHHHHHHHHHTTCCC
T ss_pred             ---CEEEECC-----CCCCCC------CCCCEEECHHHHHHHHHCCCCC
T ss_conf             ---8699736-----568887------3241774589999999883888


No 33 
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=97.69  E-value=0.00022  Score=44.36  Aligned_cols=163  Identities=17%  Similarity=0.193  Sum_probs=83.9

Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC----CCCCCCHHHHHH
Q ss_conf             8998277897133899999999998629988999975899875556688999999998631047----532134255310
Q gi|254780649|r   21 KIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKN----PRIRITAFEAYL   96 (216)
Q Consensus        21 kIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~----~~i~v~~~E~~~   96 (216)
                      +|.-|- |=||+|.||-.+.+.+.+..  |.+++.|- ..+.|  .+-.+.+-|+.-.+.++++    .++.+..+....
T Consensus       157 ~VvaFq-TRNp~HraHe~i~r~a~e~~--d~lli~pl-vG~~k--~~d~~~~~r~~~~~~~~~~~~~~~~~~l~~l~~~~  230 (349)
T 1v47_A          157 KVVAFQ-TRNAPHRAHEYLIRLGLELA--DGVLVHPI-LGAKK--PDDFPTEVIVEAYQALIRDFLPQERVAFFGLATPM  230 (349)
T ss_dssp             SEEEEE-ESSCCCHHHHHHHHHHHHHS--SEEEEEEB-CSCCC--TTSCCHHHHHHHHHHHHHHHSCGGGEEECCBCSCC
T ss_pred             EEEEEE-ECCCCCHHHHHHHHHHHHHC--CCEEEEEC-CCCCC--CCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCH
T ss_conf             689985-27988757999999999747--97899605-46776--56568799999999998345887639998447502


Q ss_pred             ---HHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHH---HHHHHHHHHC---CEEEEECCCCCHHHHCCHHHHHHHH
Q ss_conf             ---003289999997201367843896168813577777---6199999758---9899938998714321589999863
Q gi|254780649|r   97 ---NHTETFHTILQVKKHNKSVNFVWIMGADNIKSFHQW---HHWKRIVTTV---PIAIIDRFDVTFNYISSPMAKTFEY  167 (216)
Q Consensus        97 ---~~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W---~~~~~ll~~~---~iiV~~R~g~~~~~~~~~~~~~~~~  167 (216)
                         |+.-.  .+.++-.++=+++ .||+|-|-. +....   +..+++++..   .|-++.=++.-.-..       ...
T Consensus       231 ~~aGPrEa--~lhAiirkN~Gct-hfivGrdhA-G~~~~Y~~~~a~~i~~~~~~l~I~~v~~~~~~yc~~-------~~~  299 (349)
T 1v47_A          231 RYAGPKEA--VFHALVRKNFGAT-HFLVGRDHA-GVGDFYDPYAAHRIFDRLPPLGIEIVKVGAVFHCPL-------CGG  299 (349)
T ss_dssp             CCCTHHHH--HHHHHHHHHTTCS-EEEECTTTT-CSTTCSCTTHHHHGGGGSCCCSSEEEECCCEEEETT-------TTE
T ss_pred             HCCCCHHH--HHHHHHHHHCCCC-EEEECCCCC-CCCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEECC-------CCC
T ss_conf             01684788--9999999877997-064368888-622357915778998648456736996573389733-------484


Q ss_pred             CCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCC
Q ss_conf             25881233454205898099980746886889999999879685
Q gi|254780649|r  168 ARLDESLSHILCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNT  211 (216)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i  211 (216)
                      ........+.           -......||.|+||++|++|+.+
T Consensus       300 ~~~~~~cp~~-----------~~~~~~~iSgt~iR~~L~~g~~~  332 (349)
T 1v47_A          300 IASERTCPEG-----------HREKRTAISMTKVRALLREGKAP  332 (349)
T ss_dssp             EEETTTSCGG-----------GGGGCEECCHHHHHHHHHTTCCC
T ss_pred             EEECCCCCCC-----------CCCCCEECCHHHHHHHHHCCCCC
T ss_conf             7332557998-----------76455642789999999874888


No 34 
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=97.63  E-value=0.001  Score=40.48  Aligned_cols=156  Identities=19%  Similarity=0.197  Sum_probs=78.3

Q ss_pred             EECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC-C--CCCCCHHHHHH---H
Q ss_conf             8277897133899999999998629988999975899875556688999999998631047-5--32134255310---0
Q gi|254780649|r   24 LFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKN-P--RIRITAFEAYL---N   97 (216)
Q Consensus        24 ifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~-~--~i~v~~~E~~~---~   97 (216)
                      +---|-||+|.||..+...+.+..+ +.+++.|. ..+.|.  +-.+.+-|+.-.+.++++ +  .+.+..+....   +
T Consensus       191 vafqTRNp~HraHe~ii~~a~~~~~-~~lli~pl-vG~~k~--gd~~~~~r~~~~~~~~~~~p~~~~~l~~~~~~~ryaG  266 (395)
T 1r6x_A          191 VAFQTRNPMHRAHRELTVRAAREAN-AKVLIHPV-VGLTKP--GDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLAMRMSG  266 (395)
T ss_dssp             EEECCSSCCCHHHHHHHHHHHHHTT-CEEEECCB-CSBCCT--TCCCHHHHHHHHHHHGGGSSTTCEEECCBCCBCCCCH
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHCC-CCEEEEEC-CCCCCC--CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
T ss_conf             6887178897689999999998449-97899702-225886--6668799999999999737887599804764335567


Q ss_pred             HHHHHHHHHHHHCCCCCCCEEEECCCCCHH--------HHHHHHHHHHHHHH----CCEEEEECCCCCHHHHCCHHHHHH
Q ss_conf             032899999972013678438961688135--------77777619999975----898999389987143215899998
Q gi|254780649|r   98 HTETFHTILQVKKHNKSVNFVWIMGADNIK--------SFHQWHHWKRIVTT----VPIAIIDRFDVTFNYISSPMAKTF  165 (216)
Q Consensus        98 ~syT~dtL~~lk~~~p~~~l~fiiG~D~l~--------~l~~W~~~~~ll~~----~~iiV~~R~g~~~~~~~~~~~~~~  165 (216)
                      +.-.  .+.++-.++-+++ .||+|-|-.-        ++-.=+..++++..    ..|-++.=++...-          
T Consensus       267 PrEa--~lhAiirkN~Gct-hfivGrdhAg~g~~~~~~~~Y~~~~a~~~~~~~~~~l~I~ii~~~~~~Yc----------  333 (395)
T 1r6x_A          267 DREA--VWHAIIRKNYGAS-HFIVGRDHAGPGKNSKGVDFYGPYDAQELVESYKHELDIEVVPFRMVTYL----------  333 (395)
T ss_dssp             HHHH--HHHHHHHHHTTCS-EEEECTTTTCCCBCTTSCBSSCTTHHHHHHHHHHHHHTCEEEECCCEEEE----------
T ss_pred             CHHH--HHHHHHHHHCCCC-CEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCEEEE----------
T ss_conf             2677--8889999866998-40037776788988767655783057789986531369649970513997----------


Q ss_pred             HHCCCCHHHHHHHHHCCCCEEEEE------ECCCCCCCHHHHHHHHHCCCCC
Q ss_conf             632588123345420589809998------0746886889999999879685
Q gi|254780649|r  166 EYARLDESLSHILCTTSPPSWLFI------HDRHHIISSTAIRKKIIEQDNT  211 (216)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~i------~~~~~~ISST~IR~~l~~~~~i  211 (216)
                       ..     .         ..+...      ......+|+|+||++|++|+.+
T Consensus       334 -~~-----c---------~~~~~~~~~~~~~~~~~~iSGt~ir~~L~~G~~~  370 (395)
T 1r6x_A          334 -PD-----E---------DRYAPIDQIDTTKTRTLNISGTELRRRLRVGGEI  370 (395)
T ss_dssp             -GG-----G---------TEEEETTTSCSSSCCCBCCCHHHHHHHHHHTCCC
T ss_pred             -CC-----C---------CCEEECCCCCCCCCCEEEECHHHHHHHHHCCCCC
T ss_conf             -37-----8---------8288767789973354732699999999778888


No 35 
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=97.42  E-value=0.0039  Score=37.15  Aligned_cols=162  Identities=17%  Similarity=0.164  Sum_probs=81.2

Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC---CCCCCCHHHHHH-
Q ss_conf             8998277897133899999999998629988999975899875556688999999998631047---532134255310-
Q gi|254780649|r   21 KIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKN---PRIRITAFEAYL-   96 (216)
Q Consensus        21 kIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~---~~i~v~~~E~~~-   96 (216)
                      +|+-|= |-||+|.||..+...+.+..+ +-+++.|. ..+.|.  +-.+.+-|+.-.+.+.++   .++.+..+.... 
T Consensus       192 ~vvaFq-TRNp~HraHE~l~~~a~~~~~-~~llI~pl-vG~~k~--~d~~~~~r~~~~~~~~~~~~~~~~~l~~~~~~m~  266 (573)
T 1m8p_A          192 RVVAFQ-TRNPMHRAHRELTVRAARSRQ-ANVLIHPV-VGLTKP--GDIDHFTRVRAYQALLPRYPNGMAVLGLLGLAMR  266 (573)
T ss_dssp             SEEEEC-CSSCCCHHHHHHHHHHHHHTT-CEEEECCB-CCCCCT--TCHHHHHHHHHHHHHGGGSSTTSEEECBBCCCCC
T ss_pred             EEEEEE-CCCCCCHHHHHHHHHHHHHCC-CCEEECCC-CCCCCC--CCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCC
T ss_conf             046652-278887689999999998637-96784430-014676--6667899999998888508876357424564324


Q ss_pred             --HHHHHHHHHHHH-HCCCCCCCEEEECCCCCHH--------HHHHHHHHHHHHH----HCCEEEEECCCCCHHHHCCHH
Q ss_conf             --003289999997-2013678438961688135--------7777761999997----589899938998714321589
Q gi|254780649|r   97 --NHTETFHTILQV-KKHNKSVNFVWIMGADNIK--------SFHQWHHWKRIVT----TVPIAIIDRFDVTFNYISSPM  161 (216)
Q Consensus        97 --~~syT~dtL~~l-k~~~p~~~l~fiiG~D~l~--------~l~~W~~~~~ll~----~~~iiV~~R~g~~~~~~~~~~  161 (216)
                        |+.-.+  +.++ ++.| +++ .||+|-|-.-        +|-.=+..+++++    ...|-++.-++.-.-..    
T Consensus       267 yaGPrEa~--lhAiirkN~-Gct-hfiVGRDHAG~g~~~~~~~fY~~~~a~~i~~~~~~~l~I~ii~~~~~~Yc~~----  338 (573)
T 1m8p_A          267 MGGPREAI--WHAIIRKNH-GAT-HFIVGRDHAGPGSNSKGEDFYGPYDAQHAVEKYKDELGIEVVEFQMVTYLPD----  338 (573)
T ss_dssp             CCHHHHHH--HHHHHHHHH-TCS-EEEECTTTTCCCCCTTCCCSSCTTHHHHHHHHHHHHHCCEEEECCCCCBBTT----
T ss_pred             CCCCHHHH--HHHHHHHCC-CCC-EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHCCCCEECCCCCEEECC----
T ss_conf             57835888--989998527-985-5775566567788866787888413578998553320886102465064335----


Q ss_pred             HHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCC
Q ss_conf             99986325881233454205898099980746886889999999879685
Q gi|254780649|r  162 AKTFEYARLDESLSHILCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNT  211 (216)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i  211 (216)
                         ......        ....++     ......+|.|+||++|++|+.+
T Consensus       339 ---c~~~~~--------~~~c~~-----~~~~~~iSgt~iR~~L~~G~~~  372 (573)
T 1m8p_A          339 ---TDEYRP--------VDQVPA-----GVKTLNISGTELRRRLRSGAHI  372 (573)
T ss_dssp             ---TTBCCC--------SSSSCT-----TSCCBCCCHHHHHHHHHHTCCC
T ss_pred             ---CCCEEE--------CCCCCC-----CCCEEEECHHHHHHHHHCCCCC
T ss_conf             ---672876--------677789-----8754511478999999779999


No 36 
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=97.38  E-value=0.00091  Score=40.82  Aligned_cols=163  Identities=15%  Similarity=0.178  Sum_probs=81.9

Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC----CCCCCCHHHHHH
Q ss_conf             8998277897133899999999998629988999975899875556688999999998631047----532134255310
Q gi|254780649|r   21 KIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKN----PRIRITAFEAYL   96 (216)
Q Consensus        21 kIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~----~~i~v~~~E~~~   96 (216)
                      +|+-| -|-||+|.||..+.+.+++.++ +.+++.|. ..+.|  .+-.+.+-|+.-.+.++++    .++.+..+....
T Consensus       165 ~VvaF-qTRNp~Hr~He~i~k~ale~~~-~~lli~pl-vG~~k--~gd~~~~~r~~~y~~~~~~~~~~~~~~l~~l~~~m  239 (546)
T 2gks_A          165 KIVAF-QTRNPMHRVHEELTKRAMEKVG-GGLLLHPV-VGLTK--PGDVDVYTRMRIYKVLYEKYYDKKKTILAFLPLAM  239 (546)
T ss_dssp             CEEEE-CCSSCCCHHHHHHHHHHHHHHT-SEEEECCB-CSBCC--TTSCCHHHHHHHHHHHHHHHSCTTTEEECBBCCBC
T ss_pred             CCEEE-EECCCCCHHHHHHHHHHHHHHC-CCEEEECC-CCCCC--CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
T ss_conf             42466-6378897699999999998507-87798305-78787--66788799999999998503887726995347543


Q ss_pred             ---HHHHHHHHHHH-HHCCCCCCCEEEECCCCCHH-----------H-HHHHHHHHHHHHHCCEEEEECCCCCHHHHCCH
Q ss_conf             ---00328999999-72013678438961688135-----------7-77776199999758989993899871432158
Q gi|254780649|r   97 ---NHTETFHTILQ-VKKHNKSVNFVWIMGADNIK-----------S-FHQWHHWKRIVTTVPIAIIDRFDVTFNYISSP  160 (216)
Q Consensus        97 ---~~syT~dtL~~-lk~~~p~~~l~fiiG~D~l~-----------~-l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~  160 (216)
                         |+.-.+  +.+ +++.+.-+  .||+|-|-.-           + .+.+.-+++.-....|-++.=+++..-..   
T Consensus       240 ~yAGPrEa~--~hAiirkN~Gct--hfiVGRDHAG~g~~~~~~~fY~~~~a~~i~~~~~~~l~I~~i~~~~~~Yc~~---  312 (546)
T 2gks_A          240 RMAGPREAL--WHGIIRRNYGAT--HFIVGRDHASPGKDSKGKPFYDPYEAQELFKKYEDEIGIKMVPFEELVYVPE---  312 (546)
T ss_dssp             CCCTHHHHH--HHHHHHHHTTCS--EEEECTTTTCCCBCTTSCBSSCTTHHHHHHHHHHHHHTCEEEECCCCEEETT---
T ss_pred             CCCCCHHHH--HHHHHHHHCCCC--EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHCCCCEEECCCEEEECC---
T ss_conf             447847899--999998736985--5640565678776766766778367789998542221873010253087720---


Q ss_pred             HHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHH-HHHCCCCC
Q ss_conf             9999863258812334542058980999807468868899999-99879685
Q gi|254780649|r  161 MAKTFEYARLDESLSHILCTTSPPSWLFIHDRHHIISSTAIRK-KIIEQDNT  211 (216)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ISST~IR~-~l~~~~~i  211 (216)
                          ..........       +.+     ......+|+|++|+ .|++|+.+
T Consensus       313 ----c~~~v~~~~c-------~h~-----~~~~i~~sgt~~r~~lL~~G~~~  348 (546)
T 2gks_A          313 ----LDQYVEINEA-------KKR-----NLKYINISGTEIRENFLKQGRKL  348 (546)
T ss_dssp             ----TTEEECSCC---------------------------CTHHHHTTTCCC
T ss_pred             ----CCEEEECCCC-------CCC-----CCCEEECCCHHHHHHHHHCCCCC
T ss_conf             ----3938876778-------998-----64356057379999999779999


No 37 
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=97.37  E-value=0.003  Score=37.84  Aligned_cols=154  Identities=18%  Similarity=0.177  Sum_probs=79.5

Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC---CCCCCCHHHHHHHHHHHHH
Q ss_conf             7897133899999999998629988999975899875556688999999998631047---5321342553100032899
Q gi|254780649|r   27 GNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKN---PRIRITAFEAYLNHTETFH  103 (216)
Q Consensus        27 GSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~---~~i~v~~~E~~~~~syT~d  103 (216)
                      -|=||+|.||..+...+.+..+ +.+.+.|. ..+.|  ++-.+.+-|+.-.++++++   ..+.+..+....-....-+
T Consensus       195 qTRNplHraHe~li~~a~~~~~-~~lli~pl-vG~~k--~gD~~~~~rvr~y~~~~~~yp~~~~~l~~lp~~mr~aGPrE  270 (511)
T 1g8f_A          195 QTRNPMHRAHRELTVRAAREAN-AKVLIHPV-VGLTK--PGDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLAMRMSGDRE  270 (511)
T ss_dssp             EESSCCCHHHHHHHHHHHHHHT-CEEEEEEB-CSBCS--TTCCCHHHHHHHHHHHGGGSCTTSEEECCBCCBCCCCHHHH
T ss_pred             EECCCCCHHHHHHHHHHHHHCC-CCEEEEEE-ECCCC--CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHH
T ss_conf             7268898689999999997336-75688531-21588--56668799999999999737787389813675346578188


Q ss_pred             H-HHH-HHCCCCCCCEEEECCCCCHH--------HHHHHHHHHHHHHHC----CEEEEECCCCCHHHHCCHHHHHHHHCC
Q ss_conf             9-999-72013678438961688135--------777776199999758----989993899871432158999986325
Q gi|254780649|r  104 T-ILQ-VKKHNKSVNFVWIMGADNIK--------SFHQWHHWKRIVTTV----PIAIIDRFDVTFNYISSPMAKTFEYAR  169 (216)
Q Consensus       104 t-L~~-lk~~~p~~~l~fiiG~D~l~--------~l~~W~~~~~ll~~~----~iiV~~R~g~~~~~~~~~~~~~~~~~~  169 (216)
                      . +.+ +++.|.-.  .||+|-|-.-        .|-.=+..+++++..    .|-++.=++...           +.  
T Consensus       271 allhAiirkN~Gct--hfiVGRDHAG~g~~~~g~~fY~p~~Aq~~~~~~~~el~I~~v~~~~~~Y-----------~~--  335 (511)
T 1g8f_A          271 AVWHAIIRKNYGAS--HFIVGRDHAGPGKNSKGVDFYGPYDAQELVESYKHELDIEVVPFRMVTY-----------LP--  335 (511)
T ss_dssp             HHHHHHHHHHTTCS--EEECCTTTTCCCBCTTSCBSSCTTHHHHHHHHTHHHHCSEEECCCCEEE-----------EG--
T ss_pred             HHHHHHHHHHCCCC--EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHCCCCCCCCCEEEE-----------EC--
T ss_conf             99988888755995--4786787778887765656778567789998553122873122450499-----------61--


Q ss_pred             CCHHHHHHHHHCCCCEEEEEE------CCCCCCCHHHHHHHHHCCCCC
Q ss_conf             881233454205898099980------746886889999999879685
Q gi|254780649|r  170 LDESLSHILCTTSPPSWLFIH------DRHHIISSTAIRKKIIEQDNT  211 (216)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~i~------~~~~~ISST~IR~~l~~~~~i  211 (216)
                                 . -..+...+      .....||.|++|++|++|+.|
T Consensus       336 -----------~-~~~~~~~~~~~~~~~~~~~iSGtelr~~L~~G~~i  371 (511)
T 1g8f_A          336 -----------D-EDRYAPIDQIDTTKTRTLNISGTELRRRLRVGGEI  371 (511)
T ss_dssp             -----------G-GTEEEEGGGCSSSCCCCBCCCHHHHHHHHHHTCCC
T ss_pred             -----------C-CCCEEECCCCCCCCCCEEEECHHHHHHHHHCCCCC
T ss_conf             -----------7-88378657789986653700799999999776988


No 38 
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=97.28  E-value=0.0054  Score=36.37  Aligned_cols=159  Identities=18%  Similarity=0.204  Sum_probs=83.1

Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHCC----CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC-----CCCCCCH
Q ss_conf             8998277897133899999999998629----988999975899875556688999999998631047-----5321342
Q gi|254780649|r   21 KIGLFGGNFNPPHHGHIEIAQIAIKKLN----LDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKN-----PRIRITA   91 (216)
Q Consensus        21 kIgifGGSFdPiH~gHl~ia~~~~~~l~----ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~-----~~i~v~~   91 (216)
                      +|.-|= |=||+|.||..+.+.+++.+.    ...++++..-..+.|.  +-.+.+-|+.-.++++++     .++.+..
T Consensus       414 ~VvaFq-TRNp~HraHe~l~~~a~~~~~~~~~~~~~lli~plvG~~k~--gD~~~~~r~~~~~~~l~~~~~p~~~~~l~~  490 (630)
T 1x6v_B          414 AVSAFQ-LRNPVHNGHALLMQDTHKQLLERGYRRPVLLLHPLGGWTKD--DDVPLMWRMKQHAAVLEEGVLNPETTVVAI  490 (630)
T ss_dssp             EEEEEE-ESSCCCHHHHHHHHHHHHHHHHHTCSSEEEEEEEBCSCCCT--TSCCHHHHHHHHHHHHHTTSSCGGGEEECC
T ss_pred             EEEEEC-CCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC--CCCCHHHHHHHHHHHHHHCCCCCCCEEECC
T ss_conf             145530-48898667899999999998736666763898404578886--666758999999999985358867458603


Q ss_pred             HHHHH---HHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHH-------HH--HHHHHHHHHC----CEEEEECCCCCHH
Q ss_conf             55310---0032899999972013678438961688135777-------77--6199999758----9899938998714
Q gi|254780649|r   92 FEAYL---NHTETFHTILQVKKHNKSVNFVWIMGADNIKSFH-------QW--HHWKRIVTTV----PIAIIDRFDVTFN  155 (216)
Q Consensus        92 ~E~~~---~~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~-------~W--~~~~~ll~~~----~iiV~~R~g~~~~  155 (216)
                      +....   |+.-.+  +.++-.++-++. .||+|-|-. +..       -|  +..+++++..    .|-++.=++.-. 
T Consensus       491 ~p~~mryAGPREA~--lhAiirkN~GcT-hfiVGRDHA-G~g~~~~~~~~Y~~~~a~~i~~~~~~~l~I~ii~~~e~~Y-  565 (630)
T 1x6v_B          491 FPSPMMYAGPTEVQ--WHCRARMVAGAN-FYIVGRDPA-GMPHPETGKDLYEPSHGAKVLTMAPGLITLEIVPFRVAAY-  565 (630)
T ss_dssp             BCCCCCCCHHHHHH--HHHHHHHHTTCS-EEEECSSTT-CCBCTTTCSBSSCTTHHHHHHHHCTTCTTCEEEECCCEEE-
T ss_pred             CCCCCCCCCHHHHH--HHHHHHHHCCCC-EEEECCCCC-CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCEEE-
T ss_conf             67554667808999--999999977998-364688878-9887776767778467899998382225845898051489-


Q ss_pred             HHCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEE----CCCCCCCHHHHHHHHHCCCCC
Q ss_conf             32158999986325881233454205898099980----746886889999999879685
Q gi|254780649|r  156 YISSPMAKTFEYARLDESLSHILCTTSPPSWLFIH----DRHHIISSTAIRKKIIEQDNT  211 (216)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~----~~~~~ISST~IR~~l~~~~~i  211 (216)
                                +.             .. ..+...+    .....||.|+||++|++|+.+
T Consensus       566 ----------c~-------------~c-~~~~~~~~~~~~~~~~iSGt~lR~~L~~G~~p  601 (630)
T 1x6v_B          566 ----------NK-------------KK-KRMDYYDSEHHEDFEFISGTRMRKLAREGQKP  601 (630)
T ss_dssp             ----------ET-------------TT-TEEEECCSTTGGGEECCCHHHHHHHHHTTCCC
T ss_pred             ----------EC-------------CC-CEEEECCCCCCCCEECCCHHHHHHHHHCCCCC
T ss_conf             ----------75-------------67-80640578997671145799999999785999


No 39 
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=96.96  E-value=0.0099  Score=34.83  Aligned_cols=93  Identities=11%  Similarity=0.038  Sum_probs=46.8

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC----CCCCCCCHHHHHH---HH
Q ss_conf             7789713389999999999862998899997589987555668899999999863104----7532134255310---00
Q gi|254780649|r   26 GGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIK----NPRIRITAFEAYL---NH   98 (216)
Q Consensus        26 GGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~----~~~i~v~~~E~~~---~~   98 (216)
                      --|=||+|.||..+...+.+... +-|++.|. ....+  ..... ..|..-+..++.    ..++.+..+....   ++
T Consensus       169 fqTRNp~HraHe~~~~~~~~~~~-~~lli~~v-~g~~~--~~~~~-~~~~~~~~~~~~~y~p~~~v~l~~l~~~~r~aGp  243 (552)
T 3cr8_A          169 WQARQPMHRAQYEFCLKSAIENE-ANLLLHPQ-VGGDI--TEAPA-YFGLVRSFLAIRDRFPAATTQLSLLPAPPPEASG  243 (552)
T ss_dssp             ECCSSCCCHHHHHHHHHHHHHTT-CEEEECCB-CCCCT--TTCTT-HHHHHHHHHHHGGGSCGGGEEECBBCSCCCCSCS
T ss_pred             EECCCCCCHHHHHHHHHHHHHCC-CCEEEECC-CCCCC--CCCCH-HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCC
T ss_conf             42268997789999999998548-86676034-57776--66646-9999999999986467664477124776566760


Q ss_pred             HHHHHHHHHHHCCCCCCCEEEECCCCCH
Q ss_conf             3289999997201367843896168813
Q gi|254780649|r   99 TETFHTILQVKKHNKSVNFVWIMGADNI  126 (216)
Q Consensus        99 syT~dtL~~lk~~~p~~~l~fiiG~D~l  126 (216)
                      .-.  .+.++-.++-+++ .||+|-|-.
T Consensus       244 rEa--ilhAiirkN~Gct-hfiVGRDHA  268 (552)
T 3cr8_A          244 RAL--LLRAIVARNFGCS-LLIAGGEHQ  268 (552)
T ss_dssp             HHH--HHHHHHHHHHTCS-EEEC-----
T ss_pred             HHH--HHHHHHHHHCCCC-CCEECCCCC
T ss_conf             777--7777888746887-622797777


No 40 
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xmp_A*
Probab=84.10  E-value=2.1  Score=21.44  Aligned_cols=100  Identities=6%  Similarity=0.166  Sum_probs=54.2

Q ss_pred             CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH-CCCCC---CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCC
Q ss_conf             988999975899875556688999999998631-04753---21342553100032899999972013678438961688
Q gi|254780649|r   49 LDQLWWIITPFNSVKNYNLSSSLEKRISLSQSL-IKNPR---IRITAFEAYLNHTETFHTILQVKKHNKSVNFVWIMGAD  124 (216)
Q Consensus        49 ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~-~~~~~---i~v~~~E~~~~~syT~dtL~~lk~~~p~~~l~fiiG~D  124 (216)
                      -+++.++|.+..|........+..++....+.. ++...   +.+..++-..+...-++.+..+++.+|+..|+++ |..
T Consensus       193 ~~k~~vIpngID~~~~~n~~~~~~~~~~~~~~~~i~~~~~iil~vGr~~~~Kg~~~li~a~~~l~~~~p~~~l~iv-G~~  271 (416)
T 2x6q_A          193 RNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLV-GVM  271 (416)
T ss_dssp             TTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEE-ECC
T ss_pred             CCCEEEEECCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCHHCCCHHHHHHHHHHHHHCCCCEEEEE-ECC
T ss_conf             0358999389584011256899999999999809498991899980470311873899999999986899679999-527


Q ss_pred             C-------------HHHHH---------HH-----HHHHHHHHHCCEEEEEC
Q ss_conf             1-------------35777---------77-----61999997589899938
Q gi|254780649|r  125 N-------------IKSFH---------QW-----HHWKRIVTTVPIAIIDR  149 (216)
Q Consensus       125 ~-------------l~~l~---------~W-----~~~~~ll~~~~iiV~~R  149 (216)
                      .             +..+.         .+     .+...+++.++++|.+-
T Consensus       272 ~~~~~~~~~~~~~~l~~l~~~~~i~~~v~~~~~~~~~~~~~~~~adi~v~pS  323 (416)
T 2x6q_A          272 AHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMS  323 (416)
T ss_dssp             CTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCC
T ss_conf             8778065799999999999866982499989999899999999652234555


No 41 
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=70.80  E-value=5.4  Score=19.06  Aligned_cols=45  Identities=16%  Similarity=0.251  Sum_probs=25.3

Q ss_pred             HHEEECCCCCCCCEEEEECCCCCCCCHHHH-HHHHHHHHHCCCCEEEEEECCC
Q ss_conf             320216778998789982778971338999-9999999862998899997589
Q gi|254780649|r    8 QDIMRMPKVEPGMKIGLFGGNFNPPHHGHI-EIAQIAIKKLNLDQLWWIITPF   59 (216)
Q Consensus         8 ~~~~~~p~~~~~mkIgifGGSFdPiH~gHl-~ia~~~~~~l~ld~v~~ips~~   59 (216)
                      +++.+--+.....||||+||       |-| .|.-.+.+++++.-+.+-|...
T Consensus        13 ~~~~~~~~~~~~k~IgIlG~-------GQLg~ml~~aA~~LGi~v~vld~~~~   58 (403)
T 3k5i_A           13 ENLYFQGHMWNSRKVGVLGG-------GQLGRMLVESANRLNIQVNVLDADNS   58 (403)
T ss_dssp             --------CCSCCEEEEECC-------SHHHHHHHHHHHHHTCEEEEEESTTC
T ss_pred             CCEEECCCCCCCCEEEEECC-------CHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             33022264378988999868-------79999999999978998999968999


No 42 
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=69.90  E-value=3  Score=20.53  Aligned_cols=37  Identities=16%  Similarity=0.293  Sum_probs=27.1

Q ss_pred             CEEEEECCCCCCCCHHHHH-HHHHHHHHCCCCEEEEEECCCCCCC
Q ss_conf             7899827789713389999-9999998629988999975899875
Q gi|254780649|r   20 MKIGLFGGNFNPPHHGHIE-IAQIAIKKLNLDQLWWIITPFNSVK   63 (216)
Q Consensus        20 mkIgifGGSFdPiH~gHl~-ia~~~~~~l~ld~v~~ips~~~p~K   63 (216)
                      |+|||+||       |-+. |.-.+.+.+++.-+.+-|.+..|..
T Consensus         2 ~tigIlG~-------GqL~~ml~~aAk~lGi~v~v~d~~~~~pa~   39 (365)
T 2z04_A            2 LTVGILGG-------GQLGWMTILEGRKLGFKFHVLEDKENAPAC   39 (365)
T ss_dssp             CEEEEECC-------SHHHHHHHHHHGGGTCEEEEECSSSSCHHH
T ss_pred             CEEEEECC-------CHHHHHHHHHHHHCCCEEEEEECCCCCCHH
T ss_conf             89999867-------899999999999789989999569989766


No 43 
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=67.00  E-value=6.5  Score=18.59  Aligned_cols=99  Identities=11%  Similarity=0.125  Sum_probs=46.1

Q ss_pred             HHEEECCCCCCCCEEEEEC-CCCCCCCHHH--HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf             3202167789987899827-7897133899--999999998629988999975899875556688999999998631047
Q gi|254780649|r    8 QDIMRMPKVEPGMKIGLFG-GNFNPPHHGH--IEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKN   84 (216)
Q Consensus         8 ~~~~~~p~~~~~mkIgifG-GSFdPiH~gH--l~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~   84 (216)
                      |-.|++|| ++||||++|. |+      |.  ..+++.....+. .+|.++.+..+        +....+   ++.. +-
T Consensus         2 ~~~~~~~~-~~p~riavl~SG~------Gsnl~aLi~~~~~~~~-~~iv~vi~~~~--------~~~~~~---A~~~-gI   61 (215)
T 3da8_A            2 QEPLRVPP-SAPARLVVLASGT------GSLLRSLLDAAVGDYP-ARVVAVGVDRE--------CRAAEI---AAEA-SV   61 (215)
T ss_dssp             -CCEEECC-CSSEEEEEEESSC------CHHHHHHHHHSSTTCS-EEEEEEEESSC--------CHHHHH---HHHT-TC
T ss_pred             CCCCCCCC-CCCCEEEEEECCC------CHHHHHHHHHHCCCCC-CEEEEEEECCC--------HHHHHH---HHHC-CC
T ss_conf             98763899-9988899998368------2659999996377999-77999996785--------668899---9983-99


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHH
Q ss_conf             53213425531000328999999720136784389616881357
Q gi|254780649|r   85 PRIRITAFEAYLNHTETFHTILQVKKHNKSVNFVWIMGADNIKS  128 (216)
Q Consensus        85 ~~i~v~~~E~~~~~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~  128 (216)
                      |.+.++.........|--..+..+++..+  ++.+++|...+..
T Consensus        62 p~~~i~~~~~~~r~~~~~~l~~~l~~~~~--Dliv~~g~~~il~  103 (215)
T 3da8_A           62 PVFTVRLADHPSRDAWDVAITAATAAHEP--DLVVSAGFMRILG  103 (215)
T ss_dssp             CEEECCGGGSSSHHHHHHHHHHHHHTTCC--SEEEEEECCSCCC
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHCCC--CEEEECCHHHHCC
T ss_conf             73774057889999999999999876099--9999846133468


No 44 
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=62.48  E-value=7.9  Score=18.09  Aligned_cols=60  Identities=18%  Similarity=0.246  Sum_probs=37.0

Q ss_pred             CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC-----CC-CCCCCHHHHHHHHHHH
Q ss_conf             9878998277897133899999999998629988999975899875-----55-6688999999998631
Q gi|254780649|r   18 PGMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVK-----NY-NLSSSLEKRISLSQSL   81 (216)
Q Consensus        18 ~~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K-----~~-~~~~~~~~R~~m~~~~   81 (216)
                      .+-+||+- .|.-=.|.||+.+.+.|++..  |.|+.. -..||..     +. .+.-..+.=+++++.+
T Consensus        20 ~g~~Ig~V-PTMGaLH~GHlsLI~~A~~~~--d~vvVS-IFVNP~QF~~~eD~~~YPr~~e~D~~~l~~~   85 (280)
T 2ejc_A           20 KKKTIGFV-PTMGYLHEGHLSLVRRARAEN--DVVVVS-IFVNPTQFGPNEDYERYPRDFERDRKLLEKE   85 (280)
T ss_dssp             TTCCEEEE-EECSCCCHHHHHHHHHHHHHS--SEEEEE-ECCCGGGCCTTSCGGGSCCCHHHHHHHHHTT
T ss_pred             CCCEEEEE-CCCCCHHHHHHHHHHHHHHHC--CCEEEE-EECCCCCCCCCCCCCCCCCCHHHHHHHHHHC
T ss_conf             49969998-387306599999999998638--938999-9357543567631137998858889999975


No 45 
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=60.09  E-value=4.6  Score=19.46  Aligned_cols=99  Identities=8%  Similarity=0.117  Sum_probs=49.6

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf             78998277897133899999999998629988999975899875556688999999998631047532134255310003
Q gi|254780649|r   20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKNPRIRITAFEAYLNHT   99 (216)
Q Consensus        20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~~~i~v~~~E~~~~~s   99 (216)
                      ||--++..+|--    ...+...+.....=.+|.+||+...+...     .  ...+..+.++..-.+.|..++....  
T Consensus         2 Mk~l~L~S~~~~----~~~~~~~~~~~~~g~ki~~IPTAs~~~~~-----~--~~~~~~~~~f~~lG~~v~~ldl~~~--   68 (206)
T 3l4e_A            2 MKNLFLTSSFKD----VVPLFTEFESNLQGKTVTFIPTASTVEEV-----T--FYVEAGKKALESLGLLVEELDIATE--   68 (206)
T ss_dssp             CCEEEEESCGGG----CHHHHHHHSCCCTTCEEEEECGGGGGCSC-----C--HHHHHHHHHHHHTTCEEEECCTTTS--
T ss_pred             HHHHEEHHCCCC----HHHHHHHHHHHCCCCEEEEEECCCCCCCH-----H--HHHHHHHHHHHHCCCEEEEEECCCC--
T ss_conf             158400444534----39999999754389879999289888764-----4--8999999999987997899855479--


Q ss_pred             HHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf             289999997201367843896168813577777619
Q gi|254780649|r  100 ETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHW  135 (216)
Q Consensus       100 yT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~  135 (216)
                      ..-+....+    .+++.+|+-|-|++.-+..|++.
T Consensus        69 ~~~~~~~~l----~~ad~I~~~GGnt~~l~~~l~~t  100 (206)
T 3l4e_A           69 SLGEITTKL----RKNDFIYVTGGNTFFLLQELKRT  100 (206)
T ss_dssp             CHHHHHHHH----HHSSEEEECCSCHHHHHHHHHHH
T ss_pred             CHHHHHHHH----HCCCEEEECCCCHHHHHHHHHHC
T ss_conf             979999999----76999998898799999999868


No 46 
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group I intron; HET: TYR; 1.95A {Neurospora crassa} PDB: 2rkj_A
Probab=59.25  E-value=8.4  Score=17.95  Aligned_cols=33  Identities=21%  Similarity=0.344  Sum_probs=22.5

Q ss_pred             EEEEECCCCCC----CCHHHHHHHHHHHHH--CCCCEEEEE
Q ss_conf             89982778971----338999999999986--299889999
Q gi|254780649|r   21 KIGLFGGNFNP----PHHGHIEIAQIAIKK--LNLDQLWWI   55 (216)
Q Consensus        21 kIgifGGSFdP----iH~gHl~ia~~~~~~--l~ld~v~~i   55 (216)
                      ++.+|-| |||    +|.||+-.....+..  .+. +++++
T Consensus        64 ~~~~Y~G-~DPTa~SLHlGhLv~l~~L~~~Q~~Gh-~~i~L  102 (392)
T 1y42_X           64 RIGAYVG-IDPTAPSLHVGHLLPLMPLFWMYLEGY-KAFTL  102 (392)
T ss_dssp             CCEEEEE-ECCCSSSCBGGGHHHHHHHHHHHHHTC-EEEEE
T ss_pred             CCEEEEE-ECCCCCCCCHHHHHHHHHHHHHHHCCC-CEEEE
T ss_conf             9669982-368986420877999999999998799-47999


No 47 
>1jil_A Tyrrs, tyrosyl-tRNA synthetase, tyrosyl-transfer; truncation, structure based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A*
Probab=58.21  E-value=6  Score=18.81  Aligned_cols=34  Identities=18%  Similarity=0.226  Sum_probs=23.5

Q ss_pred             EEEEECCCCCC----CCHHHHHHHHHHHHHCCC-CEEEEE
Q ss_conf             89982778971----338999999999986299-889999
Q gi|254780649|r   21 KIGLFGGNFNP----PHHGHIEIAQIAIKKLNL-DQLWWI   55 (216)
Q Consensus        21 kIgifGGSFdP----iH~gHl~ia~~~~~~l~l-d~v~~i   55 (216)
                      ++.+|-| |||    .|.||+-.....+.-... -+++++
T Consensus        32 ~~~~y~G-~DPTa~sLHlGh~v~l~~l~~~q~~Gh~~i~l   70 (420)
T 1jil_A           32 QVTLYCG-ADPTADSLHIGHLLPFLTLRRFQEHGHRPIVL   70 (420)
T ss_dssp             CCEEEEE-ECCSSSSCBHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEE-ECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf             9579992-67898762155399999999999869917999


No 48 
>1iho_A Pantoate--beta-alanine ligase; rossman fold, dimer, APO, high, KSMKS, flexible domains, multidomain; 1.70A {Escherichia coli} SCOP: c.26.1.4 PDB: 3mue_A
Probab=58.11  E-value=9.5  Score=17.64  Aligned_cols=60  Identities=15%  Similarity=0.232  Sum_probs=35.0

Q ss_pred             CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC------CCCCCCHHHHHHHHHHH
Q ss_conf             98789982778971338999999999986299889999758998755------56688999999998631
Q gi|254780649|r   18 PGMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKN------YNLSSSLEKRISLSQSL   81 (216)
Q Consensus        18 ~~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~------~~~~~~~~~R~~m~~~~   81 (216)
                      .+-+||+-+ |--=.|.||+.+++.|++..  |.|+ +--..||..=      ..+.-+.+.=+++|+.+
T Consensus        20 ~g~~IgfVP-TMGaLH~GHlsLi~~A~~~~--~~vv-vSIFVNP~QF~~~eD~~~YPr~~e~D~~ll~~~   85 (283)
T 1iho_A           20 EGKRVALVP-TMGNLHDGHMKLVDEAKARA--DVVV-VSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKR   85 (283)
T ss_dssp             TTCCEEEEE-ECSCCCHHHHHHHHHHHHHC--SEEE-EEECCCGGGCSSHHHHHHSCCCHHHHHHHHHHT
T ss_pred             CCCEEEEEC-CCCHHHHHHHHHHHHHHHHC--CCEE-EEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHC
T ss_conf             499399984-86307699999999999748--9389-999537534787144322899868888999863


No 49 
>1h3f_A Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase; HET: TYB; 2.0A {Thermus thermophilus} SCOP: c.26.1.1 d.66.1.4 PDB: 1h3e_A*
Probab=57.72  E-value=9.1  Score=17.75  Aligned_cols=40  Identities=25%  Similarity=0.328  Sum_probs=25.1

Q ss_pred             CCEEEEECCCCCC----CCHHHHHHHHHHHHHCCC-CEEEEEECCC
Q ss_conf             8789982778971----338999999999986299-8899997589
Q gi|254780649|r   19 GMKIGLFGGNFNP----PHHGHIEIAQIAIKKLNL-DQLWWIITPF   59 (216)
Q Consensus        19 ~mkIgifGGSFdP----iH~gHl~ia~~~~~~l~l-d~v~~ips~~   59 (216)
                      +-++.+|-| |||    .|.||+-.+......... -+++++....
T Consensus        35 ~~~~~~Y~G-~dPTg~sLHlGhlv~~~~l~~lq~~G~~~~~li~d~   79 (432)
T 1h3f_A           35 GRPLTVKLG-ADPTRPDLHLGHAVVLRKMRQFQELGHKVVLIIGDF   79 (432)
T ss_dssp             CSCCEEEEE-ECTTCCSCBHHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CCCCEEEEE-ECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf             999889984-678997530998999999999998899499998362


No 50 
>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}
Probab=54.73  E-value=9  Score=17.77  Aligned_cols=31  Identities=13%  Similarity=0.045  Sum_probs=26.5

Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf             8971338999999999986299889999758
Q gi|254780649|r   28 NFNPPHHGHIEIAQIAIKKLNLDQLWWIITP   58 (216)
Q Consensus        28 SFdPiH~gHl~ia~~~~~~l~ld~v~~ips~   58 (216)
                      +.+++......+.+.+.++|+|.+++++|+.
T Consensus        54 ~I~~~~~~~~~Le~~L~~~fgL~~~~Vv~~~   84 (315)
T 2w48_A           54 AINYDYNENLWLEQQLKQKFGLKEAVVASSD   84 (315)
T ss_dssp             EECSSCCHHHHHHHHHHHHHTCSEEEEECC-
T ss_pred             EEECCCCCCHHHHHHHHHHCCCCEEEEECCC
T ss_conf             9948974419999999997299889996898


No 51 
>3guz_A Pantothenate synthetase; pantothenate biosynthesis, substrate binding, competitive inhibition, rossmann fold; HET: PAF; 1.67A {Escherichia coli}
Probab=53.94  E-value=11  Score=17.23  Aligned_cols=60  Identities=15%  Similarity=0.223  Sum_probs=34.0

Q ss_pred             CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC------CCCCCHHHHHHHHHHH
Q ss_conf             987899827789713389999999999862998899997589987555------6688999999998631
Q gi|254780649|r   18 PGMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNY------NLSSSLEKRISLSQSL   81 (216)
Q Consensus        18 ~~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~------~~~~~~~~R~~m~~~~   81 (216)
                      .+.+||+-+ |--=.|.||+.+++.|++..  |.++ +--..||..=.      .+.-..+.=+++|+.+
T Consensus        20 ~g~~IgfVP-TMGaLH~GHlsLI~~A~~~~--d~vv-VSIFVNP~QF~~~eD~~~YPr~~~~D~~~l~~~   85 (176)
T 3guz_A           20 EGKRVALVP-TMGNLHDGHMKLVDEAKARA--DVVA-VSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKR   85 (176)
T ss_dssp             TTCCEEEEE-ECSCCCGGGHHHHHHHHHTC--SEEE-EEECCCGGGCSCHHHHHHSCCCHHHHHHHHHHT
T ss_pred             CCCEEEEEC-CCCCHHHHHHHHHHHHHHHC--CEEE-EEEECCCHHCCCCCCCCCCCCCHHHHHHHHHHC
T ss_conf             499499983-87306599999999999759--9389-996037032466666654999807789999976


No 52 
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=53.66  E-value=11  Score=17.20  Aligned_cols=30  Identities=17%  Similarity=0.038  Sum_probs=24.5

Q ss_pred             CCCEEEEECCCCCCCCHHHHHHHHHHHHHC
Q ss_conf             987899827789713389999999999862
Q gi|254780649|r   18 PGMKIGLFGGNFNPPHHGHIEIAQIAIKKL   47 (216)
Q Consensus        18 ~~mkIgifGGSFdPiH~gHl~ia~~~~~~l   47 (216)
                      +-.||+|||||=.++..-+...|..+-+.+
T Consensus        12 ~~k~V~VF~gs~~~~~~~~~~~A~~Lg~~L   41 (215)
T 2a33_A           12 KFRRICVFCGSSQGKKSSYQDAAVDLGNEL   41 (215)
T ss_dssp             SCSEEEEECCSSCCSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCCCCHHHHHHHHHHHHH
T ss_conf             685399988678995978999999999999


No 53 
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=51.99  E-value=11  Score=17.25  Aligned_cols=59  Identities=17%  Similarity=0.374  Sum_probs=33.4

Q ss_pred             CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC-----CCC-CCCCCHHHHHHHHHHH
Q ss_conf             87899827789713389999999999862998899997589987-----555-6688999999998631
Q gi|254780649|r   19 GMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSV-----KNY-NLSSSLEKRISLSQSL   81 (216)
Q Consensus        19 ~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~-----K~~-~~~~~~~~R~~m~~~~   81 (216)
                      +.+||+-+ |--=.|.||+.+++.|.+..  |.|+. --..||.     .+. .+.-..+.=+++|+.+
T Consensus        22 g~~igfVP-TMGaLH~GHlsLI~~A~~~~--~~vvV-SIFVNP~QF~~~eD~~~YPr~le~D~~~l~~~   86 (283)
T 3ag6_A           22 GTTIGFIP-TMGALHDGHLTMVRESVSTN--DITIV-SVFVNPLQFGPNEDFDAYPRQIDKDLELVSEV   86 (283)
T ss_dssp             TCCEEEEE-ECSSCCHHHHHHHHHHHTTS--SEEEE-EECCCGGGCCTTSSTTTSCCCHHHHHHHHHHH
T ss_pred             CCEEEEEC-CCCCHHHHHHHHHHHHHHHC--CCEEE-EEEECHHHCCCCCCCCCCCCCHHHHHHHHHHC
T ss_conf             99199985-88537499999999998738--97899-99877022487543100699989999999847


No 54 
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp}
Probab=50.87  E-value=8.7  Score=17.85  Aligned_cols=59  Identities=20%  Similarity=0.382  Sum_probs=33.5

Q ss_pred             CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC-----CC-CCCCCHHHHHHHHHHH
Q ss_conf             9878998277897133899999999998629988999975899875-----55-6688999999998631
Q gi|254780649|r   18 PGMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVK-----NY-NLSSSLEKRISLSQSL   81 (216)
Q Consensus        18 ~~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K-----~~-~~~~~~~~R~~m~~~~   81 (216)
                      .+.+||+-+- --=.|.||+.+++.|++.   |.|+ +--..||..     +- .+.-..+.=+++|+.+
T Consensus        23 ~~~~IgfVPT-MGaLH~GHlsLI~~A~~~---~~vv-VSIFVNP~QF~~~eD~~~YPr~~~~D~~~l~~~   87 (285)
T 3mxt_A           23 HQLSIGYVPT-MGFLHDGHLSLVKHAKTQ---DKVI-VSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDN   87 (285)
T ss_dssp             TTCCEEEEEE-CSSCCHHHHHHHHHHTTS---SEEE-EEECCCGGGCCTTSCTTTSCCCHHHHHHHHHHT
T ss_pred             CCCEEEEECC-CCCHHHHHHHHHHHHHHC---CCEE-EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHC
T ss_conf             5993999848-630659999999999765---9869-999836112787652346999978999999867


No 55 
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=49.11  E-value=11  Score=17.27  Aligned_cols=28  Identities=14%  Similarity=0.006  Sum_probs=22.0

Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             8998277897133899999999998629
Q gi|254780649|r   21 KIGLFGGNFNPPHHGHIEIAQIAIKKLN   48 (216)
Q Consensus        21 kIgifGGSFdPiH~gHl~ia~~~~~~l~   48 (216)
                      +|+|||||=.+...-+.+.|+++-+.+.
T Consensus         3 ~I~Vf~gs~~~~~~~~~~~a~~lg~~La   30 (191)
T 1t35_A            3 TICVFAGSNPGGNEAYKRKAAELGVYMA   30 (191)
T ss_dssp             EEEEECCSSCCSSTHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             7999854799969689999999999999


No 56 
>1luc_A Bacterial luciferase; monooxygenase, flavoprotein; 1.50A {Vibrio harveyi} SCOP: c.1.16.1 PDB: 1brl_A 3fgc_A*
Probab=48.23  E-value=14  Score=16.70  Aligned_cols=35  Identities=26%  Similarity=0.519  Sum_probs=23.4

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHH------HHHCCCCEEEE
Q ss_conf             789982778971338999999999------98629988999
Q gi|254780649|r   20 MKIGLFGGNFNPPHHGHIEIAQIA------IKKLNLDQLWW   54 (216)
Q Consensus        20 mkIgifGGSFdPiH~gHl~ia~~~------~~~l~ld~v~~   54 (216)
                      ||.|+|--+++|+..+.-...+..      .+.+++|.||+
T Consensus         1 M~fg~f~~~~~~~~~~~~~~~~~~~e~a~~Ae~lGf~~~~~   41 (355)
T 1luc_A            1 MKFGNFLLTYQPPELSQTEVMKRLVNLGKASEGCGFDTVWL   41 (355)
T ss_dssp             CEEEEEECCCCCTTCCHHHHHHHHHHHHHHTGGGTCSEEEE
T ss_pred             CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             92578737889999799999999999999999879989997


No 57 
>3gjz_A Microcin immunity protein MCCF; niaid structural genomic centers for infectious diseases, csgid, immune system, structural genomics; 2.10A {Bacillus anthracis str}
Probab=48.03  E-value=14  Score=16.68  Aligned_cols=76  Identities=21%  Similarity=0.284  Sum_probs=45.3

Q ss_pred             HEEECCC-CCCCCEEEEECCCCCCCCH--HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf             2021677-8998789982778971338--999999999986299889999758998755566889999999986310475
Q gi|254780649|r    9 DIMRMPK-VEPGMKIGLFGGNFNPPHH--GHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKNP   85 (216)
Q Consensus         9 ~~~~~p~-~~~~mkIgifGGSFdPiH~--gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~~   85 (216)
                      +-|..|+ .++|-+|||.-=|.--...  .=++.+....+..++ +|..-++-...  ..-.+.+.+.|++-+..|+.++
T Consensus         2 ~~m~~P~~Lk~GD~I~viAPSs~~~~~~~~~~~~~~~~L~~~G~-~v~~~~~~~~~--~~~~agt~~~Ra~dl~~a~~d~   78 (336)
T 3gjz_A            2 NAMPLPKSLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGF-HILEGSLTGRY--DYYRSGSIQERAKELNALIRNP   78 (336)
T ss_dssp             CCCCCCCCCCTTCEEEEECSSCCHHHHCHHHHHHHHHHHHHTTC-EEEECTTTTCC--BTTBSSCHHHHHHHHHHHHTCT
T ss_pred             CCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCC-EEEECCCCCCC--CCCCCCCHHHHHHHHHHHHHCC
T ss_conf             98988999998699999958986655499999999999986899-99877520334--6756799999999999985488


Q ss_pred             CC
Q ss_conf             32
Q gi|254780649|r   86 RI   87 (216)
Q Consensus        86 ~i   87 (216)
                      .+
T Consensus        79 ~i   80 (336)
T 3gjz_A           79 NV   80 (336)
T ss_dssp             TE
T ss_pred             CC
T ss_conf             88


No 58 
>2o0m_A Transcriptional regulator, SORC family; structural genomics, PSI-2, protein structure initiative; 1.60A {Enterococcus faecalis V583} SCOP: c.124.1.8
Probab=46.32  E-value=11  Score=17.31  Aligned_cols=32  Identities=6%  Similarity=-0.048  Sum_probs=28.2

Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf             89713389999999999862998899997589
Q gi|254780649|r   28 NFNPPHHGHIEIAQIAIKKLNLDQLWWIITPF   59 (216)
Q Consensus        28 SFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~   59 (216)
                      .++++..++..+.+.+.++|+|.+++++|+..
T Consensus        86 ~~~~~~~~~~~Le~~L~~~fgL~~~~Vvp~~~  117 (345)
T 2o0m_A           86 LVMNQLLGMHQIEKEMTQYFGIQRCIVVAGDS  117 (345)
T ss_dssp             ---------CHHHHHHHHHHTCSEEEEESSCT
T ss_pred             HHHCCCCCHHHHHHHHHHHHCCCEEEEECCCC
T ss_conf             65152215799999999982997899948976


No 59 
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2a str} SCOP: c.124.1.8
Probab=45.45  E-value=10  Score=17.40  Aligned_cols=33  Identities=12%  Similarity=0.040  Sum_probs=27.6

Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC
Q ss_conf             897133899999999998629988999975899
Q gi|254780649|r   28 NFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFN   60 (216)
Q Consensus        28 SFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~   60 (216)
                      +.|++......+.+.+.++|+|.+++++|+..+
T Consensus         5 ~I~~~~~~~~~Le~~L~~~fgL~~v~Vv~~~~~   37 (266)
T 3efb_A            5 AINYDYNENLWLEQQLKQKFGLKDVVVVSGNDE   37 (266)
T ss_dssp             -------CCHHHHHHHHHHHTCSEEEEECCCSC
T ss_pred             EEECCCCCHHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf             991897431999999999849987999789988


No 60 
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=43.71  E-value=16  Score=16.28  Aligned_cols=57  Identities=18%  Similarity=0.268  Sum_probs=33.6

Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC-----C-CCCCCCHHHHHHHHHHH
Q ss_conf             8998277897133899999999998629988999975899875-----5-56688999999998631
Q gi|254780649|r   21 KIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVK-----N-YNLSSSLEKRISLSQSL   81 (216)
Q Consensus        21 kIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K-----~-~~~~~~~~~R~~m~~~~   81 (216)
                      +||+-+ |--=.|.||+.+++.|++..  |.|+ +--..||..     + ..+.-..+.=+++|+.+
T Consensus        18 ~ig~VP-TMGaLH~GHlsLi~~A~~~~--d~vv-VSIFVNP~QF~~~eD~~~YPr~l~~D~~ll~~~   80 (276)
T 1v8f_A           18 GVGFVP-TMGYLHRGHLALVERARREN--PFVV-VSVFVNPLQFGPGEDYHRYPRDLERDRALLQEA   80 (276)
T ss_dssp             CEEEEE-ECSSCCHHHHHHHHHHHHHC--SEEE-EEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHT
T ss_pred             CEEEEC-CCCCHHHHHHHHHHHHHHHC--CCEE-EEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHC
T ss_conf             899986-86517599999999999768--9789-999777766898424765899827659999858


No 61 
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp}
Probab=43.09  E-value=17  Score=16.23  Aligned_cols=61  Identities=23%  Similarity=0.300  Sum_probs=37.1

Q ss_pred             CCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC------CCCCCHHHHHHHHHHH
Q ss_conf             9987899827789713389999999999862998899997589987555------6688999999998631
Q gi|254780649|r   17 EPGMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNY------NLSSSLEKRISLSQSL   81 (216)
Q Consensus        17 ~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~------~~~~~~~~R~~m~~~~   81 (216)
                      ..+.+||+-+ |--=.|.||+.+++.|++..  |.|+ +--..||..=.      .+.-..+.=+++|+.+
T Consensus        21 ~~~~~IgfVP-TMGaLH~GHlsLI~~A~~~~--d~vv-VSIFVNP~QF~~~eD~~~YPr~le~D~~ll~~~   87 (264)
T 3n8h_A           21 IKQQKIGFVP-TMGALHNGHISLIKKAKSEN--DVVI-VSIFVNPTQFNNPNDYQTYPNQLQQDIQILASL   87 (264)
T ss_dssp             CTTSCEEEEE-ECSSCCHHHHHHHHHHHHHC--SEEE-EEECCCGGGCSCHHHHHHSCCCHHHHHHHHHHT
T ss_pred             HCCCEEEEEC-CCCHHHHHHHHHHHHHHHHC--CEEE-EEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHC
T ss_conf             6499099981-86137699999999998749--9089-999517112687566776966577789999976


No 62 
>1fx0_B ATP synthase beta chain; latent ATPase, thermal stability, potential tentoxin binding site, hydrolase; 3.20A {Spinacia oleracea} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1kmh_B*
Probab=42.91  E-value=8.1  Score=18.04  Aligned_cols=44  Identities=23%  Similarity=0.141  Sum_probs=25.8

Q ss_pred             ECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH---CCCCEEEEEECCC
Q ss_conf             16778998789982778971338999999999986---2998899997589
Q gi|254780649|r   12 RMPKVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKK---LNLDQLWWIITPF   59 (216)
Q Consensus        12 ~~p~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~---l~ld~v~~ips~~   59 (216)
                      .|-|..+|+|+|||||+=    .|.-.++..+...   .+-|-++++-.+.
T Consensus       158 ~l~pigkGQr~gIfgg~g----~GKt~l~~~~~~n~~~~~~~v~V~~~iGe  204 (498)
T 1fx0_B          158 LLAPYRRGGKIGLFGGAG----VGKTVLIMELINNIAKAHGGVSVFGGVGE  204 (498)
T ss_dssp             HHSCCCTTCCEEEEECSS----SSHHHHHHHHHHHTTTTCSSCEEEEEESC
T ss_pred             CCCCCCCCCEEEEECCCC----CCHHHHHHHHHHHHHHHCCCEEEEEEECC
T ss_conf             314504677777455899----88789999999978875699899999643


No 63 
>2qe7_A ATP synthase subunit alpha; blockage of ATP hydrolysis, F1-ATPase, single particle analysis, thermoalkaliphilic, hydrolase; 3.06A {Bacillus SP} PDB: 1sky_B
Probab=40.94  E-value=7.2  Score=18.32  Aligned_cols=45  Identities=18%  Similarity=0.200  Sum_probs=26.0

Q ss_pred             EECCCCCCCCEEEEECCCCCCCCHHHHHHHH-HHHHHCCCCEE-EEEECCC
Q ss_conf             2167789987899827789713389999999-99986299889-9997589
Q gi|254780649|r   11 MRMPKVEPGMKIGLFGGNFNPPHHGHIEIAQ-IAIKKLNLDQL-WWIITPF   59 (216)
Q Consensus        11 ~~~p~~~~~mkIgifGGSFdPiH~gHl~ia~-~~~~~l~ld~v-~~ips~~   59 (216)
                      =.|-|.++|+|+|||||+=    .|+-.++. .+.+.-.-+.+ +++-.+.
T Consensus       154 D~l~pig~Gqr~~I~g~~g----~GKt~l~~~~~~~~~~~~~~~V~~~iGe  200 (502)
T 2qe7_A          154 DSMIPIGRGQRELIIGDRQ----TGKTTIAIDTIINQKGQDVICIYVAIGQ  200 (502)
T ss_dssp             HHSSCCBTTCBCEEEECSS----SCHHHHHHHHHHGGGSCSEEEEEEEESC
T ss_pred             HCCCCCCCCCEEEEECCCC----CCHHHHHHHHHHHHCCCCCEEEEEEECC
T ss_conf             2356605786777556888----8777999999984215773589998554


No 64 
>2jan_A Tyrosyl-tRNA synthetase; protein biosynthesis, aminoacyl-tRNA synthetase, tyrrs, ligase, tyrosine, RNA-binding, ATP-binding; 2.9A {Mycobacterium tuberculosis}
Probab=40.87  E-value=11  Score=17.37  Aligned_cols=33  Identities=18%  Similarity=0.355  Sum_probs=22.7

Q ss_pred             EEEEECCCCCC----CCHHHHHHHHHHHHH--CCCCEEEEE
Q ss_conf             89982778971----338999999999986--299889999
Q gi|254780649|r   21 KIGLFGGNFNP----PHHGHIEIAQIAIKK--LNLDQLWWI   55 (216)
Q Consensus        21 kIgifGGSFdP----iH~gHl~ia~~~~~~--l~ld~v~~i   55 (216)
                      ++.+|-| |||    .|.||+-.....+.-  ++ -+++++
T Consensus        32 ~~~~y~G-~DPTa~sLHlGh~v~l~~l~~fq~~G-h~~v~l   70 (432)
T 2jan_A           32 PMTVYAG-FDPTAPSLHAGHLVPLLTLRRFQRAG-HRPIVL   70 (432)
T ss_dssp             CCEEEEE-ECCSSSSCBGGGHHHHHHHHHHHHTT-CEEEEE
T ss_pred             CCEEEEE-ECCCCCCCCHHHHHHHHHHHHHHHCC-CEEEEE
T ss_conf             9679980-68899763087799999999999879-979999


No 65 
>2pid_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, protein-substrate complex, ATP- binding, ligase, mitochondrion, nucleotide-binding; HET: YSA; 2.20A {Homo sapiens}
Probab=39.61  E-value=15  Score=16.57  Aligned_cols=37  Identities=16%  Similarity=0.300  Sum_probs=22.6

Q ss_pred             CCEEEEECCCCCC----CCHHHHHHHHHHHHHCCC-CEEEEEE
Q ss_conf             8789982778971----338999999999986299-8899997
Q gi|254780649|r   19 GMKIGLFGGNFNP----PHHGHIEIAQIAIKKLNL-DQLWWII   56 (216)
Q Consensus        19 ~mkIgifGGSFdP----iH~gHl~ia~~~~~~l~l-d~v~~ip   56 (216)
                      +-++.+|-| |||    +|.||+-.....+..... .+++++.
T Consensus        44 ~~~~~vY~G-~DPT~~sLHlGhlv~l~~l~~~q~~G~~~ivLi   85 (356)
T 2pid_A           44 SFPQTIYCG-FDPTADSLHVGHLLALLGLFHLQRAGHNVIALV   85 (356)
T ss_dssp             --CCEEEEE-ECCSSSSCBHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEE-ECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf             798379981-578987530988999999999998699899996


No 66 
>1sky_E F1-ATPase, F1-ATP synthase; F1FO ATP synthase, alpha3BETA3 subcomplex of F1-ATPase, hydrolase; 3.20A {Bacillus SP} SCOP: a.69.1.1 b.49.1.1 c.37.1.11
Probab=39.28  E-value=8.7  Score=17.87  Aligned_cols=21  Identities=38%  Similarity=0.461  Sum_probs=15.6

Q ss_pred             CCCCCCCCEEEEECCCCCCCC
Q ss_conf             677899878998277897133
Q gi|254780649|r   13 MPKVEPGMKIGLFGGNFNPPH   33 (216)
Q Consensus        13 ~p~~~~~mkIgifGGSFdPiH   33 (216)
                      |-|..+|+|+|||||+==+=+
T Consensus       145 l~pig~Gqr~~Ifg~~g~GKt  165 (473)
T 1sky_E          145 LAPYIKGGKIGLFGGAGVGKT  165 (473)
T ss_dssp             HSCEETTCEEEEECCSSSCHH
T ss_pred             CCCCCCCCEEEEECCCCCCHH
T ss_conf             456346777455558998879


No 67 
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzymes, ligase, drug design, ATP-binding, cytoplasm, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=38.97  E-value=19  Score=15.85  Aligned_cols=60  Identities=12%  Similarity=0.150  Sum_probs=33.5

Q ss_pred             CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC------CCCCCHHHHHHHHHHH
Q ss_conf             87899827789713389999999999862998899997589987555------6688999999998631
Q gi|254780649|r   19 GMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNY------NLSSSLEKRISLSQSL   81 (216)
Q Consensus        19 ~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~------~~~~~~~~R~~m~~~~   81 (216)
                      +.+||+-+ |--=.|.||+.+.+.|++.-+ |.|+. --..||..=.      .+.-..+.=+++|+.+
T Consensus        32 g~~ig~VP-TMGaLH~GHlsLI~~A~~~~~-d~vvV-SIFVNP~QF~~~eD~~~YPr~le~D~~~l~~~   97 (301)
T 3cov_A           32 GRRVMLVP-TMGALHEGHLALVRAAKRVPG-SVVVV-SIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAE   97 (301)
T ss_dssp             TCEEEEEE-ECSCCCHHHHHHHHHHHTSTT-EEEEE-EECCCGGGCCSSSHHHHSCCCHHHHHHHHHHT
T ss_pred             CCEEEEEE-CCCHHHHHHHHHHHHHHHCCC-CEEEE-EEECCCCCCCCCHHHCCCCCCHHHHHHHHHHC
T ss_conf             99089996-872175999999999865279-97999-99627534787122011698817789999977


No 68 
>1z69_A COG2141, coenzyme F420-dependent N(5),N(10)- methylenetetrahydromethanopterin reductase; (alpha, beta)8 barrel, oxidoreductase; HET: F42 1PG; 2.61A {Methanosarcina barkeri}
Probab=37.60  E-value=20  Score=15.72  Aligned_cols=33  Identities=21%  Similarity=0.315  Sum_probs=24.8

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             78998277897133899999999998629988999
Q gi|254780649|r   20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWW   54 (216)
Q Consensus        20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~   54 (216)
                      ||+|||.-..+|.. ..+.+|+. .+++++|.+|+
T Consensus         1 M~~gi~~~p~~~~~-~~~~~a~~-ae~~Gf~~~~~   33 (327)
T 1z69_A            1 MKFGIEFVPSDPAL-KIAYYAKL-SEQQGFDHVWI   33 (327)
T ss_dssp             CEEEEEECTTSCHH-HHHHHHHH-HHHTTCSEEEE
T ss_pred             CEEEEEECCCCCHH-HHHHHHHH-HHHCCCCEEEE
T ss_conf             94579818989799-99999999-99849999998


No 69 
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus HB8} SCOP: c.129.1.1
Probab=37.25  E-value=21  Score=15.69  Aligned_cols=29  Identities=14%  Similarity=0.027  Sum_probs=20.6

Q ss_pred             CE-EEEECCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             78-998277897133899999999998629
Q gi|254780649|r   20 MK-IGLFGGNFNPPHHGHIEIAQIAIKKLN   48 (216)
Q Consensus        20 mk-IgifGGSFdPiH~gHl~ia~~~~~~l~   48 (216)
                      || |++||||-..+..-+...|..+-+.+.
T Consensus         1 mk~V~Vfgss~~~~~~~~~~~a~~lG~~La   30 (171)
T 1weh_A            1 MRLLAVFVSSRLSPEDPLYARWVRYGEVLA   30 (171)
T ss_dssp             CEEEEEECCSSCCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf             988999921789989889999999999999


No 70 
>1f07_A Coenzyme F420-dependent N5,N10- methylenetetrahydromethanopterin reductase; (beta, alpha)8 barrel, TIM barrel; HET: MPO; 2.00A {Methanothermobacterthermautotrophicus} SCOP: c.1.16.3
Probab=37.23  E-value=21  Score=15.69  Aligned_cols=33  Identities=15%  Similarity=0.332  Sum_probs=20.9

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             78998277897133899999999998629988999
Q gi|254780649|r   20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWW   54 (216)
Q Consensus        20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~   54 (216)
                      ||+||+-....|+..- +.+++. .+.+++|.||+
T Consensus         1 Mkfg~~~~~~~~~~~~-~~~a~~-Ae~~Gf~~~w~   33 (321)
T 1f07_A            1 MKFGIEFVPNEPIEKI-VKLVKL-AEDVGFEYAWI   33 (321)
T ss_dssp             CEEEEEECSSSCHHHH-HHHHHH-HHHTTCCEEEE
T ss_pred             CEEEEEECCCCCHHHH-HHHHHH-HHHCCCCEEEE
T ss_conf             9369980798989999-999999-99849999998


No 71 
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal aldimine, schiff base; HET: PLR; 2.35A {Escherichia coli k-12} PDB: 3tat_A*
Probab=37.22  E-value=21  Score=15.69  Aligned_cols=39  Identities=8%  Similarity=-0.064  Sum_probs=26.0

Q ss_pred             CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCH
Q ss_conf             889999758998755566889999999986310475321342
Q gi|254780649|r   50 DQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKNPRIRITA   91 (216)
Q Consensus        50 d~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~~~i~v~~   91 (216)
                      ..++++|++.||-   ....+.++|.+++..+.++.-+.++|
T Consensus       174 ~~i~~~~~p~NPT---G~~~s~~~~~~l~~~a~~~~~~ii~D  212 (397)
T 3fsl_A          174 SIVLLHPCCHNPT---GADLTNDQWDAVIEILKARELIPFLD  212 (397)
T ss_dssp             CEEEECSSSCTTT---CCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred             EEEEEECCCCCCC---CCCCCHHHHHHHHHHHHHCCEEEEEE
T ss_conf             0899957999989---83689999999999986473589841


No 72 
>3foc_A Tryptophanyl-tRNA synthetase; structural genomics, giardiasis, aminoacyl-tRNA synthetase, ligase; 2.09A {Giardia lamblia atcc 50803}
Probab=36.89  E-value=21  Score=15.66  Aligned_cols=38  Identities=24%  Similarity=0.265  Sum_probs=24.9

Q ss_pred             CCCEEEEECCCCCC----CCHHHHHHHHHHH---HHCCCCEEEEEEC
Q ss_conf             98789982778971----3389999999999---8629988999975
Q gi|254780649|r   18 PGMKIGLFGGNFNP----PHHGHIEIAQIAI---KKLNLDQLWWIIT   57 (216)
Q Consensus        18 ~~mkIgifGGSFdP----iH~gHl~ia~~~~---~~l~ld~v~~ips   57 (216)
                      .+-+..||-| |.|    +|.||...+....   +.++.+ +++..+
T Consensus        88 ~g~pf~v~tG-~~PsSG~~HLGh~~~~~~~~~lQd~~~~~-~~i~ia  132 (451)
T 3foc_A           88 KGHPIYIYTG-RGPSSGALHLGHLLPFIFTKYLQDAFKCY-VVIQIT  132 (451)
T ss_dssp             TTCCEEEEEE-ECCCSSCCBHHHHHHHHHHHHHHHHHTCE-EEEEEC
T ss_pred             CCCCEEEEEC-CCCCCCCCCHHHHHHHHHHHHHHHCCCCC-EEEEEC
T ss_conf             5998499979-88998975399999999999998757997-899972


No 73 
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A
Probab=35.66  E-value=14  Score=16.61  Aligned_cols=33  Identities=21%  Similarity=0.392  Sum_probs=22.9

Q ss_pred             EEEEECCCCCC----CCHHHHHHHHHHHHH--CCCCEEEEE
Q ss_conf             89982778971----338999999999986--299889999
Q gi|254780649|r   21 KIGLFGGNFNP----PHHGHIEIAQIAIKK--LNLDQLWWI   55 (216)
Q Consensus        21 kIgifGGSFdP----iH~gHl~ia~~~~~~--l~ld~v~~i   55 (216)
                      ++.+|-| |||    .|.||+-....++.-  ++. +++++
T Consensus        30 ~~~~y~G-~DPTa~sLHlGhlv~l~~l~~fq~~Gh-~~i~l   68 (419)
T 2ts1_A           30 RVTLYCG-FDPTADSLHIGHLATILTMRRFQQAGH-RPIAL   68 (419)
T ss_dssp             CCEEEEE-ECCSSSSCBGGGHHHHHHHHHHHHTTC-EEEEE
T ss_pred             CCEEEEE-ECCCCCCCCHHHHHHHHHHHHHHHCCC-EEEEE
T ss_conf             8569993-678987530877999999999998699-08999


No 74 
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=35.57  E-value=22  Score=15.53  Aligned_cols=40  Identities=30%  Similarity=0.384  Sum_probs=26.0

Q ss_pred             CCCEEEEE--CCCCCCC-CHHHHH----HHHHHHHHCCCCEEEEEEC
Q ss_conf             98789982--7789713-389999----9999998629988999975
Q gi|254780649|r   18 PGMKIGLF--GGNFNPP-HHGHIE----IAQIAIKKLNLDQLWWIIT   57 (216)
Q Consensus        18 ~~mkIgif--GGSFdPi-H~gHl~----ia~~~~~~l~ld~v~~ips   57 (216)
                      ++-||-||  .|+|-|. +.-|+-    -+..+.+..+.|+|+.+-.
T Consensus        42 ~~KkVvl~~vPGAFTptCs~~hlP~y~~~~~~f~k~~gvd~I~cisv   88 (182)
T 1xiy_A           42 NNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITN   88 (182)
T ss_dssp             TTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEES
T ss_pred             CCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCEEEEEEC
T ss_conf             99849999737776986783037568888899998569852689965


No 75 
>2ck3_D ATP synthase beta chain; ATP phosphorylase, ATP phosphorylase (H+ transporting), F1FO ATP synthase, F1-ATPase, hydrolase, ATP synthesis; HET: ANP ADP; 1.9A {Bos taurus} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1cow_D* 1bmf_D* 1e1q_D* 1e1r_D* 1efr_D* 1e79_E* 1h8h_D* 1ohh_D* 1qo1_D 1w0j_D* 1w0k_D* 1h8e_D* 2jdi_D* 2jiz_D* 2jj1_D* 2jj2_D* 2v7q_D* 2wss_D* 2w6j_D 2w6e_D ...
Probab=35.54  E-value=9.4  Score=17.67  Aligned_cols=43  Identities=23%  Similarity=0.240  Sum_probs=26.1

Q ss_pred             CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC---CCCEEEEEECCC
Q ss_conf             67789987899827789713389999999999862---998899997589
Q gi|254780649|r   13 MPKVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKL---NLDQLWWIITPF   59 (216)
Q Consensus        13 ~p~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l---~ld~v~~ips~~   59 (216)
                      |-|..+|+|+|||||+    =.|+-.++..+....   +-|-++++-++.
T Consensus       147 l~pi~~Gqr~~Ifg~~----G~GKt~l~~~~~~n~~~~~~~v~V~~~iGe  192 (482)
T 2ck3_D          147 LAPYAKGGKIGLFGGA----GVGKTVLIMELINNVAKAHGGYSVFAGVGE  192 (482)
T ss_dssp             HSCEETTCEEEEEECT----TSSHHHHHHHHHHHTTTTCSSEEEEEEESC
T ss_pred             CCCCCCCCEEEEECCC----CCCHHHHHHHHHHHHHHHCCCEEEEEEEEE
T ss_conf             5775577876776689----998899999999867650799899999721


No 76 
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase family, NAD-binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum ms-1}
Probab=34.58  E-value=17  Score=16.11  Aligned_cols=28  Identities=21%  Similarity=0.491  Sum_probs=20.2

Q ss_pred             EECCCCCCCCEEEEEC-CCCCCCCHHHHHHHH
Q ss_conf             2167789987899827-789713389999999
Q gi|254780649|r   11 MRMPKVEPGMKIGLFG-GNFNPPHHGHIEIAQ   41 (216)
Q Consensus        11 ~~~p~~~~~mkIgifG-GSFdPiH~gHl~ia~   41 (216)
                      |.+|....+.||||.| |.+   -..|+..+.
T Consensus         2 ~~~~~~~~~irv~iiG~G~~---g~~h~~~~~   30 (315)
T 3c1a_A            2 MSIPANNSPVRLALIGAGRW---GKNYIRTIA   30 (315)
T ss_dssp             -------CCEEEEEEECTTT---TTTHHHHHH
T ss_pred             CCCCCCCCCEEEEEECCCHH---HHHHHHHHH
T ss_conf             89999999938999999399---999999997


No 77 
>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural genomics, PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} SCOP: c.124.1.8
Probab=33.92  E-value=23  Score=15.37  Aligned_cols=27  Identities=15%  Similarity=0.064  Sum_probs=22.8

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEECCCC
Q ss_conf             899999999998629988999975899
Q gi|254780649|r   34 HGHIEIAQIAIKKLNLDQLWWIITPFN   60 (216)
Q Consensus        34 ~gHl~ia~~~~~~l~ld~v~~ips~~~   60 (216)
                      .-|+.+.+.+.++|+|.+++++|+..+
T Consensus         7 ~~~~eLe~~L~~~fgLk~~~Vvp~~~~   33 (264)
T 2r5f_A            7 GLHLELETRLQKMYGIRQVIVVEATEP   33 (264)
T ss_dssp             CTTHHHHHHHHHHHTCSEEEEECCSST
T ss_pred             CCCHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf             468999999999839998999689999


No 78 
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=33.62  E-value=24  Score=15.34  Aligned_cols=59  Identities=24%  Similarity=0.317  Sum_probs=34.0

Q ss_pred             CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC-----CC-CCCCCHHHHHHHHHHH
Q ss_conf             878998277897133899999999998629988999975899875-----55-6688999999998631
Q gi|254780649|r   19 GMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVK-----NY-NLSSSLEKRISLSQSL   81 (216)
Q Consensus        19 ~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K-----~~-~~~~~~~~R~~m~~~~   81 (216)
                      +.+||+-+ |--=.|.||+.+++.|.+..  |.|+. --.+||..     +. .+.-..+.=+++|+.+
T Consensus        42 g~~IgfVP-TMGaLH~GHlsLI~~A~~~~--d~vvV-SIFVNP~QF~~~eD~~~YPr~le~D~~~l~~~  106 (314)
T 3inn_A           42 GKKIGFVP-TMGYLHKGHLELVRRARVEN--DVTLV-SIFVNPLQFGANEDLGRYPRDLERDAGLLHDA  106 (314)
T ss_dssp             TCCEEEEE-ECSSCCHHHHHHHHHHHHHC--SEEEE-EECCCGGGSCTTSSTTTCCCCHHHHHHHHHHT
T ss_pred             CCEEEEEC-CCCCHHHHHHHHHHHHHHHC--CEEEE-EEEECCCCCCCCCHHHHCCCCHHHHHHHHHHC
T ss_conf             99599986-86207699999999998749--94999-99777766788730745899867858999866


No 79 
>2i7g_A Monooxygenase, AGR_C_4197P; alpha-beta, TIM barrel, helix-bundle, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.73A {Agrobacterium tumefaciens str}
Probab=29.74  E-value=28  Score=14.96  Aligned_cols=38  Identities=26%  Similarity=0.393  Sum_probs=23.2

Q ss_pred             CCCCEEEEEC-C--CCCCCCHH---HH----HHHHHH--HHHCCCCEEEE
Q ss_conf             9987899827-7--89713389---99----999999--98629988999
Q gi|254780649|r   17 EPGMKIGLFG-G--NFNPPHHG---HI----EIAQIA--IKKLNLDQLWW   54 (216)
Q Consensus        17 ~~~mkIgifG-G--SFdPiH~g---Hl----~ia~~~--~~~l~ld~v~~   54 (216)
                      .++|+.|||. |  +-||.+-.   +-    ++++.+  .+.+++|.+|+
T Consensus        19 ~~~M~fgif~~~~~~~~~~~g~~~~~~~~~~~~~e~a~~AE~lGfd~~w~   68 (376)
T 2i7g_A           19 FQGMELGLYTFADVNPNPADGRGPEGARRLRELLEEIELADQVGLDVFGL   68 (376)
T ss_dssp             --CCEEEEEECCBCCSSCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             HCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             53886889874444778989988999999999999999999859989995


No 80 
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C- terminal domain, open alpha-beta structure.; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=29.69  E-value=28  Score=14.96  Aligned_cols=37  Identities=8%  Similarity=0.002  Sum_probs=24.6

Q ss_pred             CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf             8899997589987555668899999999863104753213
Q gi|254780649|r   50 DQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKNPRIRI   89 (216)
Q Consensus        50 d~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~~~i~v   89 (216)
                      -++++++++.||--   ...+.+++.++++.+.++.-+.|
T Consensus       163 ~k~i~l~~P~NPTG---~~~s~~~~~~l~~~a~~~~~~ii  199 (390)
T 1d2f_A          163 CKIMLLCSPQNPTG---KVWTCDELEIMADLCERHGVRVI  199 (390)
T ss_dssp             EEEEEEESSCTTTC---CCCCTTHHHHHHHHHHHTTCEEE
T ss_pred             CEEEEECCCCCCCC---EEECHHHHHHHHHHHHHCEEEEE
T ss_conf             27999899989876---64039999998776765304899


No 81 
>2ck3_A ATP synthase alpha chain heart isoform; ATP phosphorylase, ATP phosphorylase (H+ transporting), F1FO ATP synthase, F1-ATPase, hydrolase, ATP synthesis; HET: ANP ADP; 1.9A {Bos taurus} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1bmf_A* 1e1q_A* 1e1r_A* 1e79_A* 1h8h_A* 1nbm_A* 1ohh_A* 1qo1_A 1w0j_A* 1w0k_A* 1h8e_A* 2jdi_A* 2wss_A* 2w6j_A 2w6e_A 2w6g_A 2w6f_A 2w6h_A 2w6i_A 1cow_A* ...
Probab=29.35  E-value=12  Score=17.02  Aligned_cols=20  Identities=10%  Similarity=0.167  Sum_probs=15.2

Q ss_pred             ECCCCCCCCEEEEECCCCCC
Q ss_conf             16778998789982778971
Q gi|254780649|r   12 RMPKVEPGMKIGLFGGNFNP   31 (216)
Q Consensus        12 ~~p~~~~~mkIgifGGSFdP   31 (216)
                      .|-|.++|+|+|||||+==+
T Consensus       155 ~l~pig~Gqr~~i~g~~g~G  174 (510)
T 2ck3_A          155 SLVPIGRGQRELIIGDRQTG  174 (510)
T ss_dssp             HHSCCBTTCBCEEEESTTSS
T ss_pred             CCCCCCCCCEEEEECCCCCC
T ss_conf             35677778734456789999


No 82 
>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.70A {Vibrio fischeri ES114}
Probab=28.95  E-value=29  Score=14.88  Aligned_cols=30  Identities=20%  Similarity=0.391  Sum_probs=24.4

Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf             78971338999999999986299889999758
Q gi|254780649|r   27 GNFNPPHHGHIEIAQIAIKKLNLDQLWWIITP   58 (216)
Q Consensus        27 GSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~   58 (216)
                      -+|-|+.  -+++.+.+.++|+|.+++++|+.
T Consensus         2 ~~~hp~~--~~eLE~~L~~~fgLk~~~Vv~~~   31 (267)
T 3kv1_A            2 NAFHPVY--SVQLEQKLVEKFNLKRALISLDQ   31 (267)
T ss_dssp             ---------CHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCCCCCC--HHHHHHHHHHHHCCCEEEEECCC
T ss_conf             8878845--89999999998499889996899


No 83 
>1fx0_A ATP synthase alpha chain; latent ATPase, thermal stability, potential tentoxin binding site, hydrolase; 3.20A {Spinacia oleracea} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1kmh_A*
Probab=28.24  E-value=12  Score=16.95  Aligned_cols=33  Identities=21%  Similarity=0.225  Sum_probs=22.3

Q ss_pred             EECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC
Q ss_conf             2167789987899827789713389999999999862
Q gi|254780649|r   11 MRMPKVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKL   47 (216)
Q Consensus        11 ~~~p~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l   47 (216)
                      =.|-|..+|+|+|||||+    -.|+-.++......-
T Consensus       155 D~l~pi~~Gqr~~I~g~~----g~GKt~l~~~~~~~~  187 (507)
T 1fx0_A          155 DAMIPVGRGQRELIIGDR----QTGKTAVATDTILNQ  187 (507)
T ss_dssp             TTTSCCBTTCBCBEEESS----SSSHHHHHHHHHHTC
T ss_pred             HCCCCCCCCCEEEEECCC----CCCHHHHHHHHHHHH
T ss_conf             310231368677756588----887368899876643


No 84 
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=28.20  E-value=21  Score=15.65  Aligned_cols=31  Identities=19%  Similarity=0.335  Sum_probs=20.1

Q ss_pred             EECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf             216778998789982778971338999999999986
Q gi|254780649|r   11 MRMPKVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKK   46 (216)
Q Consensus        11 ~~~p~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~   46 (216)
                      |+|+.....||||+.|-=    ..|. .||..+.+.
T Consensus         1 ~~~~~~~~~m~Ig~IG~G----~mG~-~ia~~L~~~   31 (306)
T 3l6d_A            1 MSLSDESFEFDVSVIGLG----AMGT-IMAQVLLKQ   31 (306)
T ss_dssp             -CCCCCCCSCSEEEECCS----HHHH-HHHHHHHHT
T ss_pred             CCCCCCCCCCCEEEEEHH----HHHH-HHHHHHHHC
T ss_conf             998888889958998579----9999-999999977


No 85 
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=28.12  E-value=20  Score=15.76  Aligned_cols=29  Identities=21%  Similarity=0.294  Sum_probs=15.9

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             78998277897133899999999998629988999
Q gi|254780649|r   20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWW   54 (216)
Q Consensus        20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~   54 (216)
                      |||||.||+=   ..| ..+|..+.+. + -+|.+
T Consensus         1 MkI~iigGaG---~iG-~alA~~la~~-G-~~V~l   29 (212)
T 1jay_A            1 MRVALLGGTG---NLG-KGLALRLATL-G-HEIVV   29 (212)
T ss_dssp             CEEEEETTTS---HHH-HHHHHHHHTT-T-CEEEE
T ss_pred             CEEEEEECCH---HHH-HHHHHHHHHC-C-CEEEE
T ss_conf             9799994845---999-9999999988-9-98999


No 86 
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=27.85  E-value=30  Score=14.77  Aligned_cols=31  Identities=19%  Similarity=0.039  Sum_probs=23.9

Q ss_pred             CCCEEEEECCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             9878998277897133899999999998629
Q gi|254780649|r   18 PGMKIGLFGGNFNPPHHGHIEIAQIAIKKLN   48 (216)
Q Consensus        18 ~~mkIgifGGSFdPiH~gHl~ia~~~~~~l~   48 (216)
                      +-.||+|||||=.+...-+...|..+-+.+.
T Consensus         8 k~k~V~VF~gS~~~~~~~~~~~a~~lG~~La   38 (216)
T 1ydh_A            8 RFRKICVFCGSHSGHREVFSDAAIELGNELV   38 (216)
T ss_dssp             SCSEEEEECCSCCCSSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             6853999875789969389999999999999


No 87 
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, PSI-2, protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=26.48  E-value=24  Score=15.36  Aligned_cols=40  Identities=15%  Similarity=0.142  Sum_probs=21.9

Q ss_pred             CHHHEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             02320216778998789982778971338999999999986299889999
Q gi|254780649|r    6 SLQDIMRMPKVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWI   55 (216)
Q Consensus         6 ~~~~~~~~p~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~i   55 (216)
                      +++.-|-+.    +|||.|+|||=   ..|.- +++.+.+. + .+|..+
T Consensus        12 ~~~~~~~~~----~MkIlI~GasG---~iG~~-lv~~Ll~~-g-~~V~~l   51 (236)
T 3e8x_A           12 SGRENLYFQ----GMRVLVVGANG---KVARY-LLSELKNK-G-HEPVAM   51 (236)
T ss_dssp             -------------CCEEEEETTTS---HHHHH-HHHHHHHT-T-CEEEEE
T ss_pred             CCCCCCCCC----CCEEEEECCCC---HHHHH-HHHHHHHC-C-CEEEEE
T ss_conf             996445779----99089999988---89999-99999978-5-989999


No 88 
>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomerase; 1.90A {Pyrococcus horikoshii OT3} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A
Probab=25.73  E-value=16  Score=16.29  Aligned_cols=32  Identities=3%  Similarity=0.056  Sum_probs=18.6

Q ss_pred             CCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEE
Q ss_conf             78438961688135777776199999758989993
Q gi|254780649|r  114 SVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIID  148 (216)
Q Consensus       114 ~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~  148 (216)
                      +..-+.++|++.-.+-   .-|++.+...++-+..
T Consensus       115 ~~~~vgvlaT~~T~~s---~~y~~~l~~~~~~~~~  146 (228)
T 1jfl_A          115 GFKKAGLLATTGTIVS---GVYEKEFSKYGVEIMT  146 (228)
T ss_dssp             TCSEEEEECCHHHHHH---THHHHHHHHTTCEEEC
T ss_pred             CCCCEEEEECCCCCCC---CHHHHHHHHCCCCEEE
T ss_conf             8871389853762542---0799999983996363


No 89 
>2cyb_A Tyrosyl-tRNA synthetase; rossmann-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TYR; 1.80A {Archaeoglobus fulgidus}
Probab=25.63  E-value=33  Score=14.53  Aligned_cols=35  Identities=20%  Similarity=0.404  Sum_probs=20.1

Q ss_pred             EEEEECCCCCC---CCHHHHHHHHHHHHH--CCCCEEEEEEC
Q ss_conf             89982778971---338999999999986--29988999975
Q gi|254780649|r   21 KIGLFGGNFNP---PHHGHIEIAQIAIKK--LNLDQLWWIIT   57 (216)
Q Consensus        21 kIgifGGSFdP---iH~gHl~ia~~~~~~--l~ld~v~~ips   57 (216)
                      +..+|-| |+|   +|.||+.....+...  .+. +++++++
T Consensus        32 ~~~vy~G-~~PTg~lHLGh~v~~~~~~~lq~~G~-~~~~~i~   71 (323)
T 2cyb_A           32 KPRAYVG-YEPSGEIHLGHMMTVQKLMDLQEAGF-EIIVLLA   71 (323)
T ss_dssp             CCEEEEE-ECCCSCCBHHHHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CCEEEEE-ECCCCCCHHHHHHHHHHHHHHHHCCC-EEEEEEC
T ss_conf             9889982-69998467999999999999997799-0899934


No 90 
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=25.46  E-value=24  Score=15.32  Aligned_cols=30  Identities=30%  Similarity=0.386  Sum_probs=17.3

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             789982778971338999999999986299889999
Q gi|254780649|r   20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWI   55 (216)
Q Consensus        20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~i   55 (216)
                      |||.|+|||=.   .|.- +++.+.+. + -+|..+
T Consensus         1 MkIlV~GatG~---iG~~-l~~~L~~~-G-~~V~~~   30 (221)
T 3ew7_A            1 MKIGIIGATGR---AGSR-ILEEAKNR-G-HEVTAI   30 (221)
T ss_dssp             CEEEEETTTSH---HHHH-HHHHHHHT-T-CEEEEE
T ss_pred             CEEEEECCCCH---HHHH-HHHHHHHC-C-CEEEEE
T ss_conf             94999998818---9999-99999978-6-989999


No 91 
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=24.69  E-value=34  Score=14.42  Aligned_cols=48  Identities=13%  Similarity=0.096  Sum_probs=27.8

Q ss_pred             EECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
Q ss_conf             216778998789982778971338999999999986299889999758998755
Q gi|254780649|r   11 MRMPKVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKN   64 (216)
Q Consensus        11 ~~~p~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~   64 (216)
                      |..|......||+|.||.-    .| ..++. +.+.+++.-+.+-|.+.+|-..
T Consensus         3 ~~~~~~~~~~kvlIiG~Gq----lg-r~~a~-Aak~lG~~v~~~~~~~~~p~~~   50 (391)
T 1kjq_A            3 LGTALRPAATRVMLLGSGE----LG-KEVAI-ECQRLGVEVIAVDRYADAPAMH   50 (391)
T ss_dssp             BCCTTSTTCCEEEEESCSH----HH-HHHHH-HHHTTTCEEEEEESSTTCGGGG
T ss_pred             CCCCCCCCCCEEEEECCCH----HH-HHHHH-HHHHCCCEEEEEECCCCCCHHH
T ss_conf             6889999998999989789----99-99999-9998799899997999983676


No 92 
>2r9v_A ATP synthase subunit alpha; TM1612, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: ATP PG4; 2.10A {Thermotoga maritima MSB8}
Probab=24.06  E-value=15  Score=16.54  Aligned_cols=44  Identities=16%  Similarity=0.164  Sum_probs=25.0

Q ss_pred             ECCCCCCCCEEEEECCCCCCCCHHHHHHHHH-HHHHCCCC-EEEEEECCC
Q ss_conf             1677899878998277897133899999999-99862998-899997589
Q gi|254780649|r   12 RMPKVEPGMKIGLFGGNFNPPHHGHIEIAQI-AIKKLNLD-QLWWIITPF   59 (216)
Q Consensus        12 ~~p~~~~~mkIgifGGSFdPiH~gHl~ia~~-~~~~l~ld-~v~~ips~~   59 (216)
                      .|-|..+|+|+|||||+    -.|+-.++.. +++.-.-+ -++++-.+.
T Consensus       168 ~l~pig~Gqr~~I~g~~----g~GKt~l~~~~~~~~~~~~~~~V~~~iGe  213 (515)
T 2r9v_A          168 SMIPIGRGQRELIIGDR----QTGKTAIAIDTIINQKGQGVYCIYVAIGQ  213 (515)
T ss_dssp             HHSCEETTCBEEEEEET----TSSHHHHHHHHHHTTTTTTEEEEEEEESC
T ss_pred             CCCCCCCCCEEEEECCC----CCCHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf             23552468678886798----88867999999886520487799971341


No 93 
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=23.97  E-value=35  Score=14.34  Aligned_cols=32  Identities=6%  Similarity=0.118  Sum_probs=21.1

Q ss_pred             CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf             99889999758998755566889999999986310
Q gi|254780649|r   48 NLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLI   82 (216)
Q Consensus        48 ~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~   82 (216)
                      +-..+++++++.||-   ....+.++|.++++.+.
T Consensus       188 ~~~~~~i~~~p~NPT---G~~~s~~~~~~l~~~~~  219 (430)
T 2x5f_A          188 KDKVIMILNYPNNPT---GYTPTHKEVTTIVEAIK  219 (430)
T ss_dssp             SSEEEEEECSSCTTT---CCCCCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCC---CCCCCCHHHHHHHHHHH
T ss_conf             885899808998999---87877125899999999


No 94 
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=23.18  E-value=37  Score=14.25  Aligned_cols=35  Identities=11%  Similarity=0.190  Sum_probs=24.9

Q ss_pred             CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf             88999975899875556688999999998631047532
Q gi|254780649|r   50 DQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKNPRI   87 (216)
Q Consensus        50 d~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~~~i   87 (216)
                      .++++++++.||-   ....+.++|.++++.|.++.-+
T Consensus       165 ~k~i~l~nP~NPT---G~v~s~e~~~~i~~~a~~~~~~  199 (399)
T 1c7n_A          165 NKALLFCSPHNPV---GRVWKKDELQKIKDIVLKSDLM  199 (399)
T ss_dssp             EEEEEEESSBTTT---TBCCCHHHHHHHHHHHHHSSCE
T ss_pred             CEEEEECCCCCCC---CHHCCHHHHHHHHHCCCCCEEE
T ss_conf             7599979895977---8317899999988412454368


No 95 
>2dpy_A FLII, flagellum-specific ATP synthase; beta barrel, alpha-beta structure, hydrolase; HET: ADP; 2.40A {Salmonella typhimurium}
Probab=22.91  E-value=37  Score=14.22  Aligned_cols=45  Identities=18%  Similarity=0.235  Sum_probs=32.4

Q ss_pred             ECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC
Q ss_conf             1677899878998277897133899999999998629988999975899
Q gi|254780649|r   12 RMPKVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFN   60 (216)
Q Consensus        12 ~~p~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~   60 (216)
                      .|-|..+|+|+|||||+    =.|+-.++..+.+..+-|.+++.-.+..
T Consensus       150 ~l~pigkGQR~~Ifg~~----G~GKT~Ll~~i~~~~~~dv~V~~~iGer  194 (438)
T 2dpy_A          150 ALLTVGRGQRMGLFAGS----GVGKSVLLGMMARYTRADVIVVGLIGER  194 (438)
T ss_dssp             HHSCCBTTCEEEEEECT----TSSHHHHHHHHHHHSCCSEEEEEEESCC
T ss_pred             CCCCCCCCCEEEECCCC----CCCCHHHHHHHHHHCCCCCCEEEEEEEC
T ss_conf             23331467632532689----9980398777776226777179996210


No 96 
>3gqb_B V-type ATP synthase beta chain; A3B3, V-ATPase, ATP synthesis, ATP-binding, hydrogen ION transport, hydrolase, ION transport; 2.80A {Thermus thermophilus HB8} PDB: 3a5c_D* 3a5d_D
Probab=22.60  E-value=15  Score=16.45  Aligned_cols=35  Identities=29%  Similarity=0.390  Sum_probs=23.4

Q ss_pred             HHEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf             320216778998789982778971338999999999986
Q gi|254780649|r    8 QDIMRMPKVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKK   46 (216)
Q Consensus         8 ~~~~~~p~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~   46 (216)
                      +.+-.|-+..+|+|+|||||+.=+-.    .++....+.
T Consensus       136 k~ID~l~pigrGQr~~I~gg~GvGKt----~L~~~i~r~  170 (464)
T 3gqb_B          136 STIDVMNTLVRGQKLPIFSGSGLPAN----EIAAQIARQ  170 (464)
T ss_dssp             HHHHTTSCCBTTCBCCEEEETTSCHH----HHHHHHHHH
T ss_pred             CEEEECCCCCCCCEEECCCCCCCCHH----HHHHHHHHH
T ss_conf             10131145137756004577786426----689999876


No 97 
>3fj2_A Monooxygenase-like protein; NP_471648.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.85A {Listeria innocua} PDB: 3fez_A*
Probab=22.53  E-value=38  Score=14.18  Aligned_cols=27  Identities=15%  Similarity=0.054  Sum_probs=18.6

Q ss_pred             HHHHHHHHHCCCCCCCEEEECCCCCHH
Q ss_conf             899999972013678438961688135
Q gi|254780649|r  101 TFHTILQVKKHNKSVNFVWIMGADNIK  127 (216)
Q Consensus       101 T~dtL~~lk~~~p~~~l~fiiG~D~l~  127 (216)
                      |.+.|..++++||+.++.++-++|+..
T Consensus        29 t~~~L~~i~~~~~~~~l~l~~~~~~~~   55 (186)
T 3fj2_A           29 TEHYLRQLMENYIGENVTLLQNFSQSL   55 (186)
T ss_dssp             CHHHHHHHHHHTCSSSEEEEECSSCEE
T ss_pred             CHHHHHHHHHHCCCCCEEEEECCCCCE
T ss_conf             799999999868996469886588647


No 98 
>2inb_A Hypothetical protein; ZP_00107633.1, structural genomics, PSI-2, protein structure initiative, joint center for structural genomics; HET: MSE GOL; 1.60A {Nostoc punctiforme pcc 73102} SCOP: c.52.1.32 PDB: 2okf_A*
Probab=22.35  E-value=38  Score=14.15  Aligned_cols=59  Identities=15%  Similarity=0.238  Sum_probs=40.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHC--CEEEEEC
Q ss_conf             342553100032899999972013678438961688135777776199999758--9899938
Q gi|254780649|r   89 ITAFEAYLNHTETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTV--PIAIIDR  149 (216)
Q Consensus        89 v~~~E~~~~~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~--~iiV~~R  149 (216)
                      ++++|.-.|.=.-|.+  .|++..|+..+|+-+..|.+.+|-+=.-.+.+++..  .++|++-
T Consensus        70 i~df~~AlGQ~~~Yr~--~L~~~ePeR~LYLAI~~~iY~~fF~~~~~Q~li~~~qlkLIV~D~  130 (140)
T 2inb_A           70 ISEFHTALGQFINYRG--ALRRRQPERVLYLAVPLTTYKTFFQLDFPKEMIAENQVKMLIYDV  130 (140)
T ss_dssp             HHHHHHHHHHHHHHHH--HHHTTCTTEEEEEEEEHHHHHTGGGSHHHHHHHHHTTCCEEEEET
T ss_pred             HHHHHHHHHHHHHHHH--HHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf             7899998778999999--986329884699986689999999879999999857803999869


No 99 
>3ez1_A Aminotransferase MOCR family; YP_604413.1, structural genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=21.69  E-value=39  Score=14.07  Aligned_cols=32  Identities=25%  Similarity=0.172  Sum_probs=21.9

Q ss_pred             EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf             89999758998755566889999999986310475
Q gi|254780649|r   51 QLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKNP   85 (216)
Q Consensus        51 ~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~~   85 (216)
                      .++++|++.||-   -...+.++|.++++.++...
T Consensus       175 ~~~~~~~p~NPT---G~v~s~e~l~~l~~l~a~~~  206 (423)
T 3ez1_A          175 GILFVPTYSNPG---GETISLEKARRLAGLQAAAP  206 (423)
T ss_dssp             EEEECSSSCTTT---CCCCCHHHHHHHHTCCCSST
T ss_pred             EEEEECCCCCCC---CCCCCHHHHHHHHHHHHHCC
T ss_conf             999959896972---81289999999999998628


No 100
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=20.88  E-value=41  Score=13.97  Aligned_cols=31  Identities=16%  Similarity=0.180  Sum_probs=21.1

Q ss_pred             CEEEEE-CCCCCCCCHHHHHHHHHHHHHC---CCCEEEEEE
Q ss_conf             789982-7789713389999999999862---998899997
Q gi|254780649|r   20 MKIGLF-GGNFNPPHHGHIEIAQIAIKKL---NLDQLWWII   56 (216)
Q Consensus        20 mkIgif-GGSFdPiH~gHl~ia~~~~~~l---~ld~v~~ip   56 (216)
                      |||.|+ +||     -||+.-+..+.+.|   | -+|.|+-
T Consensus         1 M~il~~~~gt-----~Ghv~P~lala~~L~~~G-h~V~~~~   35 (415)
T 1iir_A            1 MRVLLATCGS-----RGDTEPLVALAVRVRDLG-ADVRMCA   35 (415)
T ss_dssp             CEEEEECCSC-----HHHHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred             CEEEEECCCC-----HHHHHHHHHHHHHHHHCC-CEEEEEE
T ss_conf             9799988986-----468999999999999879-9899995


No 101
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=20.68  E-value=41  Score=13.95  Aligned_cols=34  Identities=12%  Similarity=0.016  Sum_probs=23.9

Q ss_pred             CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf             8899997589987555668899999999863104753
Q gi|254780649|r   50 DQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKNPR   86 (216)
Q Consensus        50 d~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~~~   86 (216)
                      .++++++++.||.   ....+.+++.++++.+.++.-
T Consensus       178 ~~~~~l~~p~NPt---G~~~s~e~~~~l~~~~~~~~~  211 (416)
T 1bw0_A          178 TKLLIVTNPSNPC---GSNFSRKHVEDIVRLAEELRL  211 (416)
T ss_dssp             EEEEEEESSCTTT---CCCCCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEECCCCCCC---CCCCCHHHHHHHHHHHHHCCE
T ss_conf             7668848997988---740016789998767764482


Done!