HHsearch alignment for GI: 254780650 and conserved domain: COG5317
>COG5317 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=100.00 E-value=0 Score=430.97 Aligned_cols=169 Identities=49% Similarity=0.732 Sum_probs=162.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 96104337999999852599999999999999999998538983123116999999999999999999999999999999
Q gi|254780650|r 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQR 80 (170)
Q Consensus 1 ~~~~~~~~~~~~~r~~~s~~F~~Ly~EgM~LveEtaaYlDg~GR~~ak~L~r~~~l~YA~ESMrlTTRLMQiaSWLLlqR 80 (170)
T Consensus 4 ~s~~~~n~vs~a~r~a~S~~Fk~ly~eGM~lVEetAsYLDG~GR~~akvLsR~Aa~lYAaESMRLTTRLMQvASWLLlQR 83 (175)
T COG5317 4 MSEFALNTVSLAERAAFSESFKPLYAEGMGLVEETASYLDGAGRTEAKVLSRMAATLYAAESMRLTTRLMQVASWLLLQR 83 (175)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 31300347889999999876159999888899999988358862777877889999999999899999999999999999
Q ss_pred HHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCCCCHHH
Q ss_conf 9763899989974234422545578764585154223899999999999999999999983246621--03658894799
Q gi|254780650|r 81 ALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQEIYRADFD--EISRGPNHVQT 158 (170)
Q Consensus 81 Av~eGEMs~~qa~~ek~rv~l~~~~~~~~~~~~~~LP~~lr~Li~rS~~L~~RV~rLD~~~~~~~~~--~~~~~~nPv~~ 158 (170)
T Consensus 84 Av~~GEMtr~qv~sEk~kvrldt~~~~~~apgwneLP~~f~dLveRSlRLq~rVr~lDreiY~~~~a~~~~P~~~n~V~~ 163 (175)
T COG5317 84 AVNSGEMTREQVLSEKSKVRLDTPSADRDAPGWNELPESFRDLVERSLRLQARVRRLDREIYGESEATDEVPRGRNPVQA 163 (175)
T ss_pred HHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHH
T ss_conf 98748888789977888873047765557855545419999999999999999999789884344001028899863899
Q ss_pred HHHHHHHHHHC
Q ss_conf 99999998522
Q gi|254780650|r 159 QIKLLEACFEN 169 (170)
Q Consensus 159 ql~~L~~AF~~ 169 (170)
T Consensus 164 Qi~lL~tAfg~ 174 (175)
T COG5317 164 QIDLLTTAFGR 174 (175)
T ss_pred HHHHHHHHHCC
T ss_conf 99999998646