BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780650|ref|YP_003065063.1| hypothetical protein
CLIBASIA_02685 [Candidatus Liberibacter asiaticus str. psy62]
(170 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|159185883|ref|NP_356879.2| hypothetical protein Atu3742 [Agrobacterium tumefaciens str. C58]
gi|159141017|gb|AAK89664.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 171
Score = 222 bits (567), Expect = 9e-57, Method: Composition-based stats.
Identities = 82/168 (48%), Positives = 106/168 (63%), Gaps = 1/168 (0%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
MS +V +IS R S + K LY E + LVEET+ Y D G SK LPR S LY +
Sbjct: 1 MSEQVLNTISFAGRAAASNQFKTLYTEGMTLVEETASYLDGGGRTASKVLPRMASVLYAA 60
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF 120
ES+ LTTRLMQM SWL LQRA+ +G MT +QV+SEK K++ D +D PGW +LP F
Sbjct: 61 ESMRLTTRLMQMASWLLLQRAVNNGEMTRDQVLSEKNKVRLDSFNVDRNAPGWNDLPESF 120
Query: 121 KNLVERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACF 167
++L+ERS +LQ R+ LLD+EIYR ++ N VQ Q+ LL F
Sbjct: 121 RDLIERSLRLQNRVALLDREIYRPAEATKVPDNENSVQAQLNLLRTAF 168
>gi|332716475|ref|YP_004443941.1| hypothetical protein AGROH133_12088 [Agrobacterium sp. H13-3]
gi|325063160|gb|ADY66850.1| hypothetical protein AGROH133_12088 [Agrobacterium sp. H13-3]
Length = 171
Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats.
Identities = 82/168 (48%), Positives = 106/168 (63%), Gaps = 1/168 (0%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
MS +V +IS R S + K LY E + LVEET+ Y D G SK LPR S LY +
Sbjct: 1 MSEQVLNTISFAGRAAASNQFKTLYTEGMTLVEETASYLDGAGRTASKVLPRMASVLYAA 60
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF 120
ES+ LTTRLMQM SWL LQRA+ +G MT +QV+SEK K++ D +D PGW +LP F
Sbjct: 61 ESMRLTTRLMQMASWLLLQRAVNNGEMTRDQVLSEKSKVRLDSFNVDRNAPGWNDLPESF 120
Query: 121 KNLVERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACF 167
++L+ERS +LQ R+ LLD+EIYR ++ N VQ Q+ LL F
Sbjct: 121 RDLIERSLRLQNRVALLDREIYRPSEATKVPDNENSVQAQLNLLRTAF 168
>gi|222149690|ref|YP_002550647.1| hypothetical protein Avi_3663 [Agrobacterium vitis S4]
gi|221736672|gb|ACM37635.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 171
Score = 220 bits (560), Expect = 7e-56, Method: Composition-based stats.
Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 1/168 (0%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
MS ++S R S + K Y E + LVEET+ Y D G +K LPR S LY +
Sbjct: 1 MSELGLNTVSFAGRAASSSQFKATYAEGMGLVEETAAYLDGPGRSAAKVLPRMASVLYAA 60
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF 120
ES+ LTTRLMQM SWL LQRA+ +G M+ +QV+SEK K++ D +D PGW +LP F
Sbjct: 61 ESMRLTTRLMQMASWLLLQRAVNNGEMSRDQVISEKSKVRLDGFNVDRNAPGWNDLPESF 120
Query: 121 KNLVERSSQLQRRIVLLDQEIYRA-DFDEISRGPNHVQTQIKLLEACF 167
++L+ERS +LQ RI LLD+EIYR D + N VQ Q+ LL F
Sbjct: 121 RDLIERSLRLQNRIALLDREIYRPNDTSIVPDNENSVQAQLNLLRTAF 168
>gi|227823343|ref|YP_002827315.1| hypothetical protein NGR_c28160 [Sinorhizobium fredii NGR234]
gi|227342344|gb|ACP26562.1| hypothetical protein NGR_c28160 [Sinorhizobium fredii NGR234]
Length = 172
Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats.
Identities = 83/171 (48%), Positives = 106/171 (61%), Gaps = 2/171 (1%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
MS R ++S S + K LY E + LVEET+ Y D G SK LPR S LY +
Sbjct: 1 MSERGLNTVSFAGHAASSAQFKALYAEGMGLVEETAGYLDGPGRTASKVLPRMASVLYAA 60
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF 120
ES+ LTTRLMQM SWL LQRA+ +G M+ EQVMSEK K++ D +D + PGW ELP F
Sbjct: 61 ESMRLTTRLMQMASWLLLQRAVNNGEMSREQVMSEKSKVRLDSFNVDRSAPGWNELPDSF 120
Query: 121 KNLVERSSQLQRRIVLLDQEIYRADFDE--ISRGPNHVQTQIKLLEACFEN 169
+ L+ERS +LQ R+ LLD+EIYR + N V+ QIKLL+ F +
Sbjct: 121 RELIERSLRLQNRVALLDREIYRPQEATTFVPDNQNGVKAQIKLLQTAFGS 171
>gi|150397858|ref|YP_001328325.1| hypothetical protein Smed_2660 [Sinorhizobium medicae WSM419]
gi|150029373|gb|ABR61490.1| protein of unknown function DUF1465 [Sinorhizobium medicae WSM419]
Length = 172
Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats.
Identities = 79/170 (46%), Positives = 106/170 (62%), Gaps = 2/170 (1%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
MS R ++S S + K LY E + LVEET+ Y D G +K LPR S LY +
Sbjct: 1 MSERGLNTVSFAGHAASSAQFKALYSEGMGLVEETASYLDGPGRTAAKVLPRMASVLYAA 60
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF 120
ES+ LTTRLMQM SWL LQRA+ +G M+ +QV+SEK K++ D +D + PGW +LP F
Sbjct: 61 ESMRLTTRLMQMASWLLLQRAVNNGEMSRDQVLSEKNKVRLDSFNVDRSAPGWNDLPESF 120
Query: 121 KNLVERSSQLQRRIVLLDQEIYRADF--DEISRGPNHVQTQIKLLEACFE 168
++L+ERS +LQ R+ LLD+EIYR + N V+ QIKLL+ F
Sbjct: 121 RDLIERSLRLQNRVALLDREIYRPQEMTSFVPDNQNGVKAQIKLLQTAFG 170
>gi|190893322|ref|YP_001979864.1| hypothetical protein RHECIAT_CH0003748 [Rhizobium etli CIAT 652]
gi|190698601|gb|ACE92686.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 171
Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats.
Identities = 82/170 (48%), Positives = 107/170 (62%), Gaps = 1/170 (0%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
MS +IS R S + K LY E ++LVEET+ Y D +G SK LPR S LY +
Sbjct: 1 MSEVGLNTISFAGRAAASSQFKALYAEGMSLVEETAAYLDGQGRAASKVLPRMASVLYAA 60
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF 120
ES+ LTTRLMQM SWL LQRA+ +G M+ +QV++EK K++ D +D PGW +LP F
Sbjct: 61 ESMRLTTRLMQMASWLLLQRAVNNGEMSRDQVLAEKNKVRLDGFNVDRAAPGWGDLPESF 120
Query: 121 KNLVERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFEN 169
++LVERS +LQ RI LLD+EIYR + N VQ Q+ LL+ F N
Sbjct: 121 RDLVERSLRLQNRIALLDREIYRPGEAVIVHDNQNSVQAQLSLLQTAFGN 170
>gi|307300437|ref|ZP_07580217.1| protein of unknown function DUF1465 [Sinorhizobium meliloti BL225C]
gi|307318302|ref|ZP_07597737.1| protein of unknown function DUF1465 [Sinorhizobium meliloti AK83]
gi|306895984|gb|EFN26735.1| protein of unknown function DUF1465 [Sinorhizobium meliloti AK83]
gi|306904603|gb|EFN35187.1| protein of unknown function DUF1465 [Sinorhizobium meliloti BL225C]
Length = 172
Score = 217 bits (552), Expect = 5e-55, Method: Composition-based stats.
Identities = 80/170 (47%), Positives = 106/170 (62%), Gaps = 2/170 (1%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
MS R ++S S + K LY E + LVEET+ Y D G +K LPR S LY +
Sbjct: 1 MSERGLNTVSFAGHAASSAQFKALYAEGMGLVEETASYLDGPGRTAAKVLPRMASVLYAA 60
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF 120
ES+ LTTRLMQM SWL LQRA+ +G M+ EQV+SEK K++ D +D + PGW +LP F
Sbjct: 61 ESMRLTTRLMQMASWLLLQRAVNNGEMSREQVLSEKSKVRLDSFNVDRSAPGWNDLPESF 120
Query: 121 KNLVERSSQLQRRIVLLDQEIYRADFDE--ISRGPNHVQTQIKLLEACFE 168
++L+ERS +LQ R+ LLD+EIYR + N V+ QIKLL+ F
Sbjct: 121 RDLIERSLRLQNRVALLDREIYRPQEATSFVPDNQNGVKAQIKLLQTAFG 170
>gi|209550823|ref|YP_002282740.1| hypothetical protein Rleg2_3247 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|241206233|ref|YP_002977329.1| hypothetical protein Rleg_3544 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|209536579|gb|ACI56514.1| protein of unknown function DUF1465 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|240860123|gb|ACS57790.1| protein of unknown function DUF1465 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 171
Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats.
Identities = 82/170 (48%), Positives = 107/170 (62%), Gaps = 1/170 (0%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
MS +IS R S + K LY E ++LVEET+ Y D +G SK LPR S LY +
Sbjct: 1 MSEVGLNTISFAGRAAASSQFKALYAEGMSLVEETAAYLDGQGRAASKVLPRMASVLYAA 60
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF 120
ES+ LTTRLMQM SWL LQRA+ +G M+ +QV++EK K++ D +D PGW +LP F
Sbjct: 61 ESMRLTTRLMQMASWLLLQRAVNNGEMSRDQVLAEKNKVRLDGFNVDRAAPGWGDLPESF 120
Query: 121 KNLVERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFEN 169
++LVERS +LQ RI LLD+EIYR + N VQ Q+ LL+ F N
Sbjct: 121 RDLVERSLRLQNRIALLDREIYRPSEAVIVHDNQNSVQAQLSLLQTAFGN 170
>gi|86359096|ref|YP_470988.1| hypothetical protein RHE_CH03505 [Rhizobium etli CFN 42]
gi|218460454|ref|ZP_03500545.1| hypothetical protein RetlK5_13531 [Rhizobium etli Kim 5]
gi|218662942|ref|ZP_03518872.1| hypothetical protein RetlI_28019 [Rhizobium etli IE4771]
gi|86283198|gb|ABC92261.1| hypothetical conserved protein [Rhizobium etli CFN 42]
gi|327188834|gb|EGE56028.1| hypothetical protein RHECNPAF_770076 [Rhizobium etli CNPAF512]
Length = 171
Score = 216 bits (550), Expect = 9e-55, Method: Composition-based stats.
Identities = 82/170 (48%), Positives = 107/170 (62%), Gaps = 1/170 (0%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
MS +IS R S + K LY E ++LVEET+ Y D +G SK LPR S LY +
Sbjct: 1 MSEVGLNTISFAGRAAASSQFKALYAEGMSLVEETAAYLDGQGRAASKVLPRMASVLYAA 60
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF 120
ES+ LTTRLMQM SWL LQRA+ +G M+ +QV++EK K++ D +D PGW +LP F
Sbjct: 61 ESMRLTTRLMQMASWLLLQRAVNNGEMSRDQVLAEKNKVRLDGFNVDRAAPGWGDLPESF 120
Query: 121 KNLVERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFEN 169
++LVERS +LQ RI LLD+EIYR + N VQ Q+ LL+ F N
Sbjct: 121 RDLVERSLRLQNRIALLDREIYRPAEAVIVHDNQNSVQAQLSLLQTAFGN 170
>gi|118588365|ref|ZP_01545774.1| hypothetical protein SIAM614_23827 [Stappia aggregata IAM 12614]
gi|118439071|gb|EAV45703.1| hypothetical protein SIAM614_23827 [Stappia aggregata IAM 12614]
Length = 179
Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats.
Identities = 69/165 (41%), Positives = 98/165 (59%), Gaps = 2/165 (1%)
Query: 8 SISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTT 67
++ + S + L++E ++LVEET+ Y D G +K LPR S Y +ES+ LTT
Sbjct: 14 AVHIAHHLASSDSFQNLFQEGMSLVEETAMYLDGNGREEAKQLPRPASLAYATESMRLTT 73
Query: 68 RLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERS 127
RLMQ+ SWL LQRA+ +G M+ EQ SEK K++ D + P W +LP + LVERS
Sbjct: 74 RLMQLASWLLLQRAVNEGEMSREQAGSEKNKVRLDKLSTAAGGPTWNDLPETLRELVERS 133
Query: 128 SQLQRRIVLLDQEIYRADFDEISR--GPNHVQTQIKLLEACFENF 170
S+LQ R+V LD+ +YR D +++ N V +QI L A F F
Sbjct: 134 SRLQERVVHLDKMLYRKDAEQVEEATNDNPVASQIDKLHAAFGKF 178
>gi|222087019|ref|YP_002545554.1| hypothetical protein Arad_3745 [Agrobacterium radiobacter K84]
gi|221724467|gb|ACM27623.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 170
Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats.
Identities = 78/169 (46%), Positives = 107/169 (63%), Gaps = 1/169 (0%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
MS +IS S + ++LY E ++LVEET+ Y D +G SK LPR S LY +
Sbjct: 1 MSELGLNTISFAGHAASSAQFRMLYSEGMSLVEETAGYLDGQGRTASKVLPRMASVLYAA 60
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF 120
ES+ LTTRLMQM SWL LQRA+ +G M+ +QV++EK K++ D +D PGW +LP F
Sbjct: 61 ESMRLTTRLMQMASWLLLQRAVNNGEMSRDQVLAEKNKVRLDGFNVDRNAPGWNDLPEAF 120
Query: 121 KNLVERSSQLQRRIVLLDQEIYRADFDEISR-GPNHVQTQIKLLEACFE 168
++LVERS +LQ R+ LLD+EIYR +I N V+ Q+ LL+ F
Sbjct: 121 RDLVERSLRLQNRVALLDREIYRPTEPQIVPDNQNSVKAQLSLLQTAFG 169
>gi|254503819|ref|ZP_05115970.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222439890|gb|EEE46569.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 180
Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats.
Identities = 69/171 (40%), Positives = 99/171 (57%), Gaps = 3/171 (1%)
Query: 3 NRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSES 62
+R S ++ + S + L++E ++LVEET+ Y D +G +K LPR S Y +ES
Sbjct: 9 DRSSDAVHIAHHLASSDNFQTLFQEGMSLVEETALYLDGDGREEAKKLPRPASLAYATES 68
Query: 63 VLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKN 122
+ LTTRLMQ+ SWL LQRA+ +G M+ EQ S+K K++ D P W +LP +N
Sbjct: 69 MRLTTRLMQLASWLLLQRAVNEGEMSHEQAGSDKNKVRLDKLSSAMGGPAWDDLPESLRN 128
Query: 123 LVERSSQLQRRIVLLDQEIYRADFDEISR---GPNHVQTQIKLLEACFENF 170
LVERS++LQ R+V LD+ +YRA+ N V +QI L A F
Sbjct: 129 LVERSTRLQERVVHLDKMLYRAEEAAPQEEANNDNPVASQINQLHAAFGKI 179
>gi|15966526|ref|NP_386879.1| hypothetical protein SMc03989 [Sinorhizobium meliloti 1021]
gi|15075797|emb|CAC47352.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
Length = 196
Score = 213 bits (542), Expect = 9e-54, Method: Composition-based stats.
Identities = 79/168 (47%), Positives = 105/168 (62%), Gaps = 2/168 (1%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
MS R ++S S + K LY E + LVEET+ Y D G +K LPR S LY +
Sbjct: 1 MSERGLNTVSFAGHAASSAQFKALYAEGMGLVEETASYLDGPGRTAAKVLPRMASVLYAA 60
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF 120
ES+ LTTRLMQM SWL LQRA+ +G M+ EQV+SEK K++ D +D + PGW +LP F
Sbjct: 61 ESMRLTTRLMQMASWLLLQRAVNNGEMSREQVLSEKSKVRLDSFNVDRSAPGWNDLPESF 120
Query: 121 KNLVERSSQLQRRIVLLDQEIYRADFDE--ISRGPNHVQTQIKLLEAC 166
++L+ERS +LQ R+ LLD+EIYR + N V+ QIKLL+
Sbjct: 121 RDLIERSLRLQNRVALLDREIYRPQEATSFVPDNQNGVKAQIKLLQTA 168
>gi|254780650|ref|YP_003065063.1| hypothetical protein CLIBASIA_02685 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040327|gb|ACT57123.1| hypothetical protein CLIBASIA_02685 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 170
Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats.
Identities = 170/170 (100%), Positives = 170/170 (100%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS
Sbjct: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF 120
ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF
Sbjct: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF 120
Query: 121 KNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFENF 170
KNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFENF
Sbjct: 121 KNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFENF 170
>gi|116253755|ref|YP_769593.1| hypothetical protein RL4016 [Rhizobium leguminosarum bv. viciae
3841]
gi|218682762|ref|ZP_03530363.1| hypothetical protein RetlC8_28535 [Rhizobium etli CIAT 894]
gi|115258403|emb|CAK09506.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 166
Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats.
Identities = 80/164 (48%), Positives = 105/164 (64%), Gaps = 1/164 (0%)
Query: 7 GSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLT 66
+IS R S + K LY E ++LVEET+ Y D +G SK LPR S LY +ES+ LT
Sbjct: 2 NTISFAGRAAASSQFKALYAEGMSLVEETAAYLDGQGRAASKVLPRMASVLYAAESMRLT 61
Query: 67 TRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVER 126
TRLMQM SWL LQRA+ +G M+ +QV++EK K++ D +D PGW +LP F++LVER
Sbjct: 62 TRLMQMASWLLLQRAVNNGEMSRDQVLAEKNKVRLDGFNVDRAAPGWGDLPESFRDLVER 121
Query: 127 SSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFEN 169
S +LQ RI LLD+EIYR + N VQ Q+ LL+ F N
Sbjct: 122 SLRLQNRIALLDREIYRPSEAVIVHDNQNSVQAQLSLLQTAFGN 165
>gi|163758832|ref|ZP_02165919.1| hypothetical protein HPDFL43_15452 [Hoeflea phototrophica DFL-43]
gi|162284122|gb|EDQ34406.1| hypothetical protein HPDFL43_15452 [Hoeflea phototrophica DFL-43]
Length = 178
Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats.
Identities = 75/169 (44%), Positives = 104/169 (61%), Gaps = 2/169 (1%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
M++ +++ +R S + K LY E +ALVEET+ Y D G SK LPR + LY +
Sbjct: 7 MTDTSLNTVNLADRMANSGQFKALYAEGMALVEETANYLDGPGRTASKALPRLAAVLYAA 66
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF 120
ES+ LTTRLMQM SWL LQRA+ +G M +QV++EK K++ D D PGW ELP F
Sbjct: 67 ESMRLTTRLMQMASWLLLQRAVNNGEMNRDQVVAEKNKVRLDSFNCDRNAPGWAELPEAF 126
Query: 121 KNLVERSSQLQRRIVLLDQEIYRADFDE--ISRGPNHVQTQIKLLEACF 167
++LVE S ++Q R+ +LD+EIYR++ N VQ Q LL+ F
Sbjct: 127 RDLVEHSLRIQNRVAILDREIYRSNETPTLRPDNENSVQAQQNLLQTAF 175
>gi|148558994|ref|YP_001259558.1| hypothetical protein BOV_1648 [Brucella ovis ATCC 25840]
gi|148370251|gb|ABQ60230.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 230
Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats.
Identities = 69/167 (41%), Positives = 93/167 (55%), Gaps = 1/167 (0%)
Query: 3 NRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSES 62
S IS R +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES
Sbjct: 62 QMPSNMISLAERMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAES 121
Query: 63 VLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKN 122
+ LTTRLMQ+ SWL LQRA G MT QV +EK K++ D PGW ELP F +
Sbjct: 122 MRLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAKVRLDTPSAGEAAPGWNELPLAFVD 181
Query: 123 LVERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
LVERS +LQ R+ +D+E+Y + + N V QI LL+ F
Sbjct: 182 LVERSMRLQARVRRMDREVYGEVMALQRAPRGNPVSEQIVLLKTAFG 228
>gi|225628274|ref|ZP_03786308.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|261757359|ref|ZP_06001068.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|225616120|gb|EEH13168.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|261737343|gb|EEY25339.1| conserved hypothetical protein [Brucella sp. F5/99]
Length = 230
Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats.
Identities = 69/167 (41%), Positives = 92/167 (55%), Gaps = 1/167 (0%)
Query: 3 NRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSES 62
S IS R +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES
Sbjct: 62 QMPSNMISLAERMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAES 121
Query: 63 VLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKN 122
+ LTTRLMQ+ SWL LQRA G MT QV +EK K++ D PGW ELP F +
Sbjct: 122 MRLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAKMRLDTPSAGEAAPGWNELPLAFVD 181
Query: 123 LVERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
LVERS +LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 182 LVERSMRLQARVRRMDREVYGEVMALQRVPRGNPVSEQIVLLKTAFG 228
>gi|307944512|ref|ZP_07659852.1| AraC family transcriptional regulator [Roseibium sp. TrichSKD4]
gi|307772261|gb|EFO31482.1| AraC family transcriptional regulator [Roseibium sp. TrichSKD4]
Length = 181
Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats.
Identities = 67/166 (40%), Positives = 93/166 (56%), Gaps = 4/166 (2%)
Query: 8 SISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTT 67
+ NR S + L++E + LVEET+ Y D EG + +K L R S Y +ES+ LTT
Sbjct: 14 PVKFANRLANSDNFQSLFQEGMTLVEETAMYLDGEGRVEAKQLERPASLAYATESMRLTT 73
Query: 68 RLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERS 127
RLMQ+ SWL LQRA+ +G M+ EQ S+K K++ D + P W LP + ++ERS
Sbjct: 74 RLMQLASWLLLQRAVNEGEMSREQASSDKNKVRLDKLSNATGGPSWDNLPETLRYMIERS 133
Query: 128 SQLQRRIVLLDQEIYRADFDEISRG----PNHVQTQIKLLEACFEN 169
+LQ RIV LD +YRA + N V +Q+ L A F N
Sbjct: 134 IRLQERIVHLDAMLYRAADQAEADSNDNHENPVASQLSQLHAAFGN 179
>gi|297248976|ref|ZP_06932684.1| hypothetical protein BAYG_03017 [Brucella abortus bv. 5 str. B3196]
gi|297174109|gb|EFH33466.1| hypothetical protein BAYG_03017 [Brucella abortus bv. 5 str. B3196]
Length = 230
Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats.
Identities = 68/167 (40%), Positives = 92/167 (55%), Gaps = 1/167 (0%)
Query: 3 NRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSES 62
S IS R +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES
Sbjct: 62 QMPSNMISLAERMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAES 121
Query: 63 VLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKN 122
+ LTTRLMQ+ SWL LQRA G MT QV +EK +++ D PGW ELP F +
Sbjct: 122 MRLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAEVRLDTPSAGEAAPGWNELPLAFVD 181
Query: 123 LVERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
LVERS +LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 182 LVERSMRLQARVRRMDREVYGEVMALQRVPRGNPVSEQIVLLKTAFG 228
>gi|239832792|ref|ZP_04681121.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239825059|gb|EEQ96627.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 213
Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats.
Identities = 67/167 (40%), Positives = 92/167 (55%), Gaps = 1/167 (0%)
Query: 3 NRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSES 62
S IS R +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES
Sbjct: 45 QMPSNMISLAERMVFSDSFKPIYTQGMDMVEEAASYLDGEGREDARNLSRVAATLYAAES 104
Query: 63 VLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKN 122
+ LTTRLMQ+ SWL LQRA G M+ +QV +EK K++ D GW+ELP F
Sbjct: 105 MRLTTRLMQIASWLLLQRAARSGEMSRQQVSAEKAKVRLDTPSAGEAAQGWSELPAAFVE 164
Query: 123 LVERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
LVERS +LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 165 LVERSMRLQARVRRMDREVYGEVVSLQGIPRGNPVSEQIVLLKTAFG 211
>gi|189024795|ref|YP_001935563.1| hypothetical protein BAbS19_I16050 [Brucella abortus S19]
gi|237816082|ref|ZP_04595078.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|189020367|gb|ACD73089.1| hypothetical protein BAbS19_I16050 [Brucella abortus S19]
gi|237788745|gb|EEP62957.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 230
Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats.
Identities = 67/167 (40%), Positives = 91/167 (54%), Gaps = 1/167 (0%)
Query: 3 NRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSES 62
S IS +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES
Sbjct: 62 QMPSNMISLAECMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAES 121
Query: 63 VLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKN 122
+ LTTRLMQ+ SWL LQRA G MT QV +EK +++ D PGW ELP F +
Sbjct: 122 MRLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAEVRLDTPSAGEAAPGWNELPLAFVD 181
Query: 123 LVERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
LVERS +LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 182 LVERSMRLQARVRRMDREVYGEVMALQRVPRGNPVSEQIVLLKTAFG 228
>gi|261325746|ref|ZP_05964943.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261301726|gb|EEY05223.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 209
Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats.
Identities = 68/167 (40%), Positives = 91/167 (54%), Gaps = 1/167 (0%)
Query: 3 NRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSES 62
S IS R +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES
Sbjct: 41 QMPSNMISLAERMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAES 100
Query: 63 VLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKN 122
+ LTTRLMQ+ SWL LQRA G MT QV +EK K++ D PGW ELP F +
Sbjct: 101 MRLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAKVRLDTPSAGEAAPGWNELPLAFVD 160
Query: 123 LVERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
LVERS +LQ R+ + +E+Y + N V QI LL+ F
Sbjct: 161 LVERSMRLQARVRRMGREVYGEVMALQRVPRGNPVSEQIVLLKTAFG 207
>gi|326409718|gb|ADZ66783.1| conserved hypothetical protein [Brucella melitensis M28]
Length = 209
Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats.
Identities = 68/167 (40%), Positives = 92/167 (55%), Gaps = 1/167 (0%)
Query: 3 NRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSES 62
S IS R +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES
Sbjct: 41 QMPSNMISLAERMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAES 100
Query: 63 VLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKN 122
+ LTTRLMQ+ SWL LQRA G MT QV +EK +++ D PGW ELP F +
Sbjct: 101 MRLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAEVRLDTPSAGEAAPGWNELPLAFVD 160
Query: 123 LVERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
LVERS +LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 161 LVERSMRLQARVRRMDREVYGEVMALQRVPRGNPVSEQIVLLKTAFG 207
>gi|328542513|ref|YP_004302622.1| hypothetical protein SL003B_0893 [polymorphum gilvum SL003B-26A1]
gi|326412259|gb|ADZ69322.1| Hypothetical conserved protein [Polymorphum gilvum SL003B-26A1]
Length = 181
Score = 204 bits (518), Expect = 5e-51, Method: Composition-based stats.
Identities = 67/166 (40%), Positives = 92/166 (55%), Gaps = 4/166 (2%)
Query: 7 GSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLT 66
+S +R S + + L++E + LVEET+ Y D EG SK LPR S Y +ES+ LT
Sbjct: 13 EMVSFADRLAASQKFQALFQEGMGLVEETATYLDGEGRSQSKRLPRPASLAYATESMRLT 72
Query: 67 TRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVER 126
TRLMQ+ SWL LQRA+ +G MT+EQ SEK K++ D + W +LP ++L+ R
Sbjct: 73 TRLMQLASWLLLQRAVNEGEMTVEQAGSEKNKVRLDKLSSATGGSAWNDLPEHLQDLIHR 132
Query: 127 SSQLQRRIVLLDQEIYRADFDEIS----RGPNHVQTQIKLLEACFE 168
S +LQ RI LD +Y D N V +Q+ L A F
Sbjct: 133 SIRLQERIRHLDAMLYPKPDDTAEAVENTMENPVASQLNQLYAAFG 178
>gi|265984723|ref|ZP_06097458.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|264663315|gb|EEZ33576.1| conserved hypothetical protein [Brucella sp. 83/13]
Length = 175
Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats.
Identities = 69/167 (41%), Positives = 92/167 (55%), Gaps = 1/167 (0%)
Query: 3 NRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSES 62
S IS R +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES
Sbjct: 7 QMPSNMISLAERMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAES 66
Query: 63 VLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKN 122
+ LTTRLMQ+ SWL LQRA G MT QV +EK K++ D PGW ELP F +
Sbjct: 67 MRLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAKVRLDTPSAGEAAPGWNELPLAFVD 126
Query: 123 LVERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
LVERS +LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 127 LVERSMRLQARVRRMDREVYGEVVALQRVPRGNPVSEQIVLLKTAFG 173
>gi|260568790|ref|ZP_05839258.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261219295|ref|ZP_05933576.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261322356|ref|ZP_05961553.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261754114|ref|ZP_05997823.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|260154174|gb|EEW89256.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260924384|gb|EEX90952.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261295046|gb|EEX98542.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261743867|gb|EEY31793.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 175
Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats.
Identities = 69/167 (41%), Positives = 92/167 (55%), Gaps = 1/167 (0%)
Query: 3 NRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSES 62
S IS R +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES
Sbjct: 7 QMPSNMISLAERMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAES 66
Query: 63 VLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKN 122
+ LTTRLMQ+ SWL LQRA G MT QV +EK K++ D PGW ELP F +
Sbjct: 67 MRLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAKVRLDTPSAGEAAPGWNELPLAFVD 126
Query: 123 LVERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
LVERS +LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 127 LVERSMRLQARVRRMDREVYGEVMALQRVPRGNPVSEQIVLLKTAFG 173
>gi|153008541|ref|YP_001369756.1| hypothetical protein Oant_1210 [Ochrobactrum anthropi ATCC 49188]
gi|151560429|gb|ABS13927.1| protein of unknown function DUF1465 [Ochrobactrum anthropi ATCC
49188]
Length = 175
Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats.
Identities = 70/168 (41%), Positives = 94/168 (55%), Gaps = 1/168 (0%)
Query: 2 SNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSE 61
S S IS R +FS K +Y E + +VEE + Y D EG ++ L R + LY +E
Sbjct: 6 SQMPSNMISLAERMVFSDSFKPIYAEGMDMVEEAASYLDGEGREDARNLSRVAATLYAAE 65
Query: 62 SVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFK 121
S+ LTTRLMQ+ SWL LQRA +G MT +QV +EK K++ D GW+ELP F
Sbjct: 66 SMRLTTRLMQVASWLLLQRAARNGEMTRQQVAAEKAKVRLDTPSAGEIAQGWSELPAAFM 125
Query: 122 NLVERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
LVERS +LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 126 ELVERSMRLQARVRRMDREVYGEVVSLQGVPRGNPVSEQIVLLKTAFG 173
>gi|254719708|ref|ZP_05181519.1| hypothetical protein Bru83_09223 [Brucella sp. 83/13]
gi|306837833|ref|ZP_07470695.1| protein of unknown function DUF1465 [Brucella sp. NF 2653]
gi|306844697|ref|ZP_07477282.1| protein of unknown function DUF1465 [Brucella sp. BO1]
gi|306274869|gb|EFM56639.1| protein of unknown function DUF1465 [Brucella sp. BO1]
gi|306407072|gb|EFM63289.1| protein of unknown function DUF1465 [Brucella sp. NF 2653]
Length = 168
Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats.
Identities = 69/166 (41%), Positives = 92/166 (55%), Gaps = 1/166 (0%)
Query: 4 RVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESV 63
S IS R +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES+
Sbjct: 1 MPSNMISLAERMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAESM 60
Query: 64 LLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNL 123
LTTRLMQ+ SWL LQRA G MT QV +EK K++ D PGW ELP F +L
Sbjct: 61 RLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAKVRLDTPSAGEAAPGWNELPLAFVDL 120
Query: 124 VERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
VERS +LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 121 VERSMRLQARVRRMDREVYGEVVALQRVPRGNPVSEQIVLLKTAFG 166
>gi|23502563|ref|NP_698690.1| hypothetical protein BR1705 [Brucella suis 1330]
gi|161619634|ref|YP_001593521.1| hypothetical protein BCAN_A1744 [Brucella canis ATCC 23365]
gi|163845285|ref|YP_001622940.1| hypothetical protein BSUIS_B1181 [Brucella suis ATCC 23445]
gi|254703484|ref|ZP_05165312.1| hypothetical protein Bsuib36_06082 [Brucella suis bv. 3 str. 686]
gi|254714566|ref|ZP_05176377.1| hypothetical protein BcetM6_14747 [Brucella ceti M644/93/1]
gi|254717463|ref|ZP_05179274.1| hypothetical protein BcetM_13871 [Brucella ceti M13/05/1]
gi|256370114|ref|YP_003107625.1| hypothetical protein BMI_I1725 [Brucella microti CCM 4915]
gi|23348564|gb|AAN30605.1| conserved hypothetical protein [Brucella suis 1330]
gi|161336445|gb|ABX62750.1| protein of unknown function DUF1465 [Brucella canis ATCC 23365]
gi|163676008|gb|ABY40118.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|256000277|gb|ACU48676.1| hypothetical protein BMI_I1725 [Brucella microti CCM 4915]
Length = 168
Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats.
Identities = 69/166 (41%), Positives = 92/166 (55%), Gaps = 1/166 (0%)
Query: 4 RVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESV 63
S IS R +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES+
Sbjct: 1 MPSNMISLAERMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAESM 60
Query: 64 LLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNL 123
LTTRLMQ+ SWL LQRA G MT QV +EK K++ D PGW ELP F +L
Sbjct: 61 RLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAKVRLDTPSAGEAAPGWNELPLAFVDL 120
Query: 124 VERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
VERS +LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 121 VERSMRLQARVRRMDREVYGEVMALQRVPRGNPVSEQIVLLKTAFG 166
>gi|315122163|ref|YP_004062652.1| hypothetical protein CKC_02065 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495565|gb|ADR52164.1| hypothetical protein CKC_02065 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 170
Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats.
Identities = 126/170 (74%), Positives = 149/170 (87%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
MSNR+SG+IS ++R + S+RLKVLYKE ++LVEETSCYFD EG LSKTL R +S LYTS
Sbjct: 1 MSNRISGAISFMDRTVSSIRLKVLYKECMSLVEETSCYFDEEGLSLSKTLSRVVSSLYTS 60
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF 120
ESVLLTTRLMQMVSWL L+RALEDGNMTLEQV++EK+KIKFD S LD T+P W++LP FF
Sbjct: 61 ESVLLTTRLMQMVSWLLLRRALEDGNMTLEQVIAEKKKIKFDSSHLDYTIPEWSDLPSFF 120
Query: 121 KNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFENF 170
+NLVERS QLQ+R+VLLD+EIYR D +++S PNHVQTQIKLLEACFENF
Sbjct: 121 RNLVERSLQLQKRVVLLDKEIYRTDLNDVSHKPNHVQTQIKLLEACFENF 170
>gi|261750861|ref|ZP_05994570.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261740614|gb|EEY28540.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
Length = 175
Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats.
Identities = 69/167 (41%), Positives = 92/167 (55%), Gaps = 1/167 (0%)
Query: 3 NRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSES 62
S IS R +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES
Sbjct: 7 QMPSNMISLAERMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAES 66
Query: 63 VLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKN 122
+ LTTRLMQ+ SWL LQRA G MT QV +EK K++ D PGW ELP F +
Sbjct: 67 MRLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAKVRLDTPSAGEAAPGWNELPLAFVD 126
Query: 123 LVERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
LVERS +LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 127 LVERSMRLQARVRRMDREVYGEVMALQRVARGNPVSEQIVLLKTAFG 173
>gi|261222829|ref|ZP_05937110.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261316211|ref|ZP_05955408.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|265987273|ref|ZP_06099830.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265998788|ref|ZP_06111345.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260921413|gb|EEX88066.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261295434|gb|EEX98930.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|262553477|gb|EEZ09246.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264659470|gb|EEZ29731.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 175
Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats.
Identities = 69/167 (41%), Positives = 92/167 (55%), Gaps = 1/167 (0%)
Query: 3 NRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSES 62
S IS R +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES
Sbjct: 7 QMPSNMISLAERMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAES 66
Query: 63 VLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKN 122
+ LTTRLMQ+ SWL LQRA G MT QV +EK K++ D PGW ELP F +
Sbjct: 67 MRLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAKMRLDTPSAGEAAPGWNELPLAFVD 126
Query: 123 LVERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
LVERS +LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 127 LVERSMRLQARVRRMDREVYGEVMALQRVPRGNPVSEQIVLLKTAFG 173
>gi|17986614|ref|NP_539248.1| hypothetical protein BMEI0331 [Brucella melitensis bv. 1 str. 16M]
gi|260565794|ref|ZP_05836277.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260755405|ref|ZP_05867753.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260884420|ref|ZP_05896034.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214676|ref|ZP_05928957.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|265991740|ref|ZP_06104297.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265995577|ref|ZP_06108134.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|17982227|gb|AAL51512.1| hypothetical protein BMEI0331 [Brucella melitensis bv. 1 str. 16M]
gi|260151167|gb|EEW86262.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260675513|gb|EEX62334.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260873948|gb|EEX81017.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260916283|gb|EEX83144.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|262766861|gb|EEZ12479.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263002696|gb|EEZ15099.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 175
Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats.
Identities = 68/167 (40%), Positives = 92/167 (55%), Gaps = 1/167 (0%)
Query: 3 NRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSES 62
S IS R +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES
Sbjct: 7 QMPSNMISLAERMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAES 66
Query: 63 VLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKN 122
+ LTTRLMQ+ SWL LQRA G MT QV +EK +++ D PGW ELP F +
Sbjct: 67 MRLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAEVRLDTPSAGEAAPGWNELPLAFVD 126
Query: 123 LVERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
LVERS +LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 127 LVERSMRLQARVRRMDREVYGEVMALQRVPRGNPVSEQIVLLKTAFG 173
>gi|261315926|ref|ZP_05955123.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261304952|gb|EEY08449.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
Length = 175
Score = 199 bits (505), Expect = 1e-49, Method: Composition-based stats.
Identities = 68/167 (40%), Positives = 91/167 (54%), Gaps = 1/167 (0%)
Query: 3 NRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSES 62
S IS +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES
Sbjct: 7 QMPSNMISLAECMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAES 66
Query: 63 VLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKN 122
+ LTTRLMQ+ SWL LQRA G MT QV +EK K++ D PGW ELP F +
Sbjct: 67 MRLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAKMRLDTPSAGEAAPGWNELPLAFVD 126
Query: 123 LVERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
LVERS +LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 127 LVERSMRLQARVRRMDREVYGEVMALQRVPRGNPVSEQIVLLKTAFG 173
>gi|254700366|ref|ZP_05162194.1| hypothetical protein Bsuib55_05849 [Brucella suis bv. 5 str. 513]
Length = 168
Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats.
Identities = 69/166 (41%), Positives = 92/166 (55%), Gaps = 1/166 (0%)
Query: 4 RVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESV 63
S IS R +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES+
Sbjct: 1 MPSNMISLAERMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAESM 60
Query: 64 LLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNL 123
LTTRLMQ+ SWL LQRA G MT QV +EK K++ D PGW ELP F +L
Sbjct: 61 RLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAKVRLDTPSAGEAAPGWNELPLAFVDL 120
Query: 124 VERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
VERS +LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 121 VERSMRLQARVRRMDREVYGEVMALQRVARGNPVSEQIVLLKTAFG 166
>gi|115522693|ref|YP_779604.1| hypothetical protein RPE_0666 [Rhodopseudomonas palustris BisA53]
gi|115516640|gb|ABJ04624.1| protein of unknown function DUF1465 [Rhodopseudomonas palustris
BisA53]
Length = 171
Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats.
Identities = 63/172 (36%), Positives = 91/172 (52%), Gaps = 4/172 (2%)
Query: 1 MSNRVSG---SISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKL 57
MSN G + R S L++E + LVEET+ Y D EG + +K L R +S
Sbjct: 1 MSNLSQGDGALVHLSERLTNSTAFTSLFREGMDLVEETAAYLDGEGRVEAKALDRTVSLT 60
Query: 58 YTSESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELP 117
Y +ES+ LTTRLMQ+ SWL L RA+++G MTL Q EK K+K + +LP
Sbjct: 61 YATESMRLTTRLMQLASWLLLHRAVKEGEMTLGQANREKTKVKLSAADPGP-ADMIDKLP 119
Query: 118 CFFKNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFEN 169
+ L+ RS LQ ++ LD I+ A + + N + Q+ L+A FE+
Sbjct: 120 EQLQELIHRSMLLQEKVRRLDHTIHAATAADRAPIGNPLVPQLNRLKAAFEH 171
>gi|254708719|ref|ZP_05170530.1| hypothetical protein BpinB_00371 [Brucella pinnipedialis B2/94]
gi|256030245|ref|ZP_05443859.1| hypothetical protein BpinM2_06291 [Brucella pinnipedialis
M292/94/1]
gi|256160420|ref|ZP_05458109.1| hypothetical protein BcetM4_15539 [Brucella ceti M490/95/1]
gi|256255626|ref|ZP_05461162.1| hypothetical protein BcetB_15358 [Brucella ceti B1/94]
gi|260167920|ref|ZP_05754731.1| hypothetical protein BruF5_06042 [Brucella sp. F5/99]
Length = 168
Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats.
Identities = 69/166 (41%), Positives = 92/166 (55%), Gaps = 1/166 (0%)
Query: 4 RVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESV 63
S IS R +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES+
Sbjct: 1 MPSNMISLAERMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAESM 60
Query: 64 LLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNL 123
LTTRLMQ+ SWL LQRA G MT QV +EK K++ D PGW ELP F +L
Sbjct: 61 RLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAKMRLDTPSAGEAAPGWNELPLAFVDL 120
Query: 124 VERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
VERS +LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 121 VERSMRLQARVRRMDREVYGEVMALQRVPRGNPVSEQIVLLKTAFG 166
>gi|260547179|ref|ZP_05822917.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260758627|ref|ZP_05870975.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260762459|ref|ZP_05874796.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260095544|gb|EEW79422.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260668945|gb|EEX55885.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260672885|gb|EEX59706.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
Length = 175
Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats.
Identities = 67/167 (40%), Positives = 91/167 (54%), Gaps = 1/167 (0%)
Query: 3 NRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSES 62
S IS +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES
Sbjct: 7 QMPSNMISLAECMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAES 66
Query: 63 VLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKN 122
+ LTTRLMQ+ SWL LQRA G MT QV +EK +++ D PGW ELP F +
Sbjct: 67 MRLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAEVRLDTPSAGEAAPGWNELPLAFVD 126
Query: 123 LVERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
LVERS +LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 127 LVERSMRLQARVRRMDREVYGEVMALQRVPRGNPVSEQIVLLKTAFG 173
>gi|256061742|ref|ZP_05451879.1| hypothetical protein Bneo5_15481 [Brucella neotomae 5K33]
Length = 168
Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats.
Identities = 68/166 (40%), Positives = 91/166 (54%), Gaps = 1/166 (0%)
Query: 4 RVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESV 63
S IS R +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES+
Sbjct: 1 MPSNMISLAERMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAESM 60
Query: 64 LLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNL 123
LTTRLMQ+ SWL LQRA G MT QV +EK K++ D PGW ELP F +L
Sbjct: 61 RLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAKVRLDTPSAGEAAPGWNELPLAFVDL 120
Query: 124 VERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
VERS +LQ R+ + +E+Y + N V QI LL+ F
Sbjct: 121 VERSMRLQARVRRMGREVYGEVMALQRVPRGNPVSEQIVLLKTAFG 166
>gi|254708427|ref|ZP_05170255.1| hypothetical protein BpinM_16110 [Brucella pinnipedialis
M163/99/10]
Length = 168
Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats.
Identities = 68/166 (40%), Positives = 91/166 (54%), Gaps = 1/166 (0%)
Query: 4 RVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESV 63
S IS +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES+
Sbjct: 1 MPSNMISLAECMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAESM 60
Query: 64 LLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNL 123
LTTRLMQ+ SWL LQRA G MT QV +EK K++ D PGW ELP F +L
Sbjct: 61 RLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAKMRLDTPSAGEAAPGWNELPLAFVDL 120
Query: 124 VERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
VERS +LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 121 VERSMRLQARVRRMDREVYGEVMALQRVPRGNPVSEQIVLLKTAFG 166
>gi|225853161|ref|YP_002733394.1| hypothetical protein BMEA_A1758 [Brucella melitensis ATCC 23457]
gi|254689873|ref|ZP_05153127.1| hypothetical protein Babob68_06837 [Brucella abortus bv. 6 str.
870]
gi|254694366|ref|ZP_05156194.1| hypothetical protein Babob3T_06847 [Brucella abortus bv. 3 str.
Tulya]
gi|256045315|ref|ZP_05448209.1| hypothetical protein Bmelb1R_12547 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256114273|ref|ZP_05455018.1| hypothetical protein Bmelb3E_15768 [Brucella melitensis bv. 3 str.
Ether]
gi|256258127|ref|ZP_05463663.1| hypothetical protein Babob9C_12439 [Brucella abortus bv. 9 str.
C68]
gi|225641526|gb|ACO01440.1| protein of unknown function DUF1465 [Brucella melitensis ATCC
23457]
Length = 168
Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats.
Identities = 68/166 (40%), Positives = 92/166 (55%), Gaps = 1/166 (0%)
Query: 4 RVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESV 63
S IS R +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES+
Sbjct: 1 MPSNMISLAERMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAESM 60
Query: 64 LLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNL 123
LTTRLMQ+ SWL LQRA G MT QV +EK +++ D PGW ELP F +L
Sbjct: 61 RLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAEVRLDTPSAGEAAPGWNELPLAFVDL 120
Query: 124 VERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
VERS +LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 121 VERSMRLQARVRRMDREVYGEVMALQRVPRGNPVSEQIVLLKTAFG 166
>gi|294850956|ref|ZP_06791632.1| hypothetical protein BAZG_03086 [Brucella sp. NVSL 07-0026]
gi|294821599|gb|EFG38595.1| hypothetical protein BAZG_03086 [Brucella sp. NVSL 07-0026]
Length = 164
Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats.
Identities = 68/162 (41%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Query: 8 SISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTT 67
IS R +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES+ LTT
Sbjct: 1 MISLAERMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAESMRLTT 60
Query: 68 RLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERS 127
RLMQ+ SWL LQRA G MT QV +EK K++ D PGW ELP F +LVERS
Sbjct: 61 RLMQIASWLLLQRAARSGEMTRPQVSAEKAKVRLDTPSAGEAAPGWNELPLVFVDLVERS 120
Query: 128 SQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
+LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 121 MRLQARVRRMDREVYGEVMALQRVPRGNPVSEQIVLLKTAFG 162
>gi|62290577|ref|YP_222370.1| hypothetical protein BruAb1_1690 [Brucella abortus bv. 1 str.
9-941]
gi|82700493|ref|YP_415067.1| hypothetical protein BAB1_1717 [Brucella melitensis biovar Abortus
2308]
gi|254698024|ref|ZP_05159852.1| hypothetical protein Babob28_10033 [Brucella abortus bv. 2 str.
86/8/59]
gi|254730908|ref|ZP_05189486.1| hypothetical protein Babob42_06872 [Brucella abortus bv. 4 str.
292]
gi|62196709|gb|AAX75009.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616594|emb|CAJ11673.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
Length = 168
Score = 197 bits (500), Expect = 7e-49, Method: Composition-based stats.
Identities = 67/166 (40%), Positives = 91/166 (54%), Gaps = 1/166 (0%)
Query: 4 RVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESV 63
S IS +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES+
Sbjct: 1 MPSNMISLAECMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAESM 60
Query: 64 LLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNL 123
LTTRLMQ+ SWL LQRA G MT QV +EK +++ D PGW ELP F +L
Sbjct: 61 RLTTRLMQIASWLLLQRAARSGEMTRPQVSAEKAEVRLDTPSAGEAAPGWNELPLAFVDL 120
Query: 124 VERSSQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
VERS +LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 121 VERSMRLQARVRRMDREVYGEVMALQRVPRGNPVSEQIVLLKTAFG 166
>gi|110635509|ref|YP_675717.1| hypothetical protein Meso_3180 [Mesorhizobium sp. BNC1]
gi|110286493|gb|ABG64552.1| protein of unknown function DUF1465 [Chelativorans sp. BNC1]
Length = 176
Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats.
Identities = 73/166 (43%), Positives = 95/166 (57%), Gaps = 3/166 (1%)
Query: 5 VSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVL 64
+ I RR+FS K LY E + LVEE + Y D EG +K L R + LY +ES+
Sbjct: 8 GADMIKLAERRVFSQSFKPLYNEGMGLVEEAAEYLDGEGRASAKNLSRTAASLYAAESMR 67
Query: 65 LTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLV 124
LTTRLMQ+ SWL LQRA G MT EQV +EK K++ D + L PGW+ELP F+NLV
Sbjct: 68 LTTRLMQLASWLLLQRAANSGEMTREQVAAEKAKVRLDTASLHEDAPGWSELPEPFRNLV 127
Query: 125 ERSSQLQRRIVLLDQEIYRADFDEISRG---PNHVQTQIKLLEACF 167
RS +L+ + +D+EIY + N V QI LL+ F
Sbjct: 128 NRSLRLEALVRRMDEEIYGSPESRGRNDRFPENPVSDQINLLQTAF 173
>gi|218674276|ref|ZP_03523945.1| hypothetical protein RetlG_23652 [Rhizobium etli GR56]
Length = 156
Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats.
Identities = 75/152 (49%), Positives = 97/152 (63%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
MS +IS R S + K LY E ++LVEET+ Y D +G SK LPR S LY +
Sbjct: 1 MSEVGLNTISFAGRAAASSQFKALYAEGMSLVEETAAYLDGQGRAASKVLPRMASVLYAA 60
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF 120
ES+ LTTRLMQM SWL LQRA+ +G M+ +QV++EK K++ D +D PGW +LP F
Sbjct: 61 ESMRLTTRLMQMASWLLLQRAVNNGEMSRDQVLAEKNKVRLDGFNVDRAAPGWGDLPESF 120
Query: 121 KNLVERSSQLQRRIVLLDQEIYRADFDEISRG 152
++LVERS +LQ RI LLD+EIYR I
Sbjct: 121 RDLVERSLRLQNRIALLDREIYRPAEAVIVHD 152
>gi|254473131|ref|ZP_05086529.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211957852|gb|EEA93054.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 174
Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 5 VSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVL 64
+ + R + S L++E + L+EET+ Y D G SK L A S Y +ES+
Sbjct: 10 PENTFNFAQRLMTSQNFTELFREGMGLIEETASYLDGPGRKQSKALGPAASLAYATESMR 69
Query: 65 LTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLV 124
LTTRLMQ+ SWL LQRA+ DG + + SEK KI+ D + + P W +LP + L+
Sbjct: 70 LTTRLMQLASWLLLQRAVNDGEIVQAEAQSEKNKIRVDNATKEMQNPAWNDLPEQLRGLI 129
Query: 125 ERSSQLQRRIVLLDQEI-YRADFDEISRGPNHVQTQIKLLEACFE 168
E S +LQRRI +D + ++ + N V Q+ + A F+
Sbjct: 130 ETSFKLQRRIKHVDNMLKEEMLREQAANSSNPVGDQLSQISAAFK 174
>gi|148258152|ref|YP_001242737.1| hypothetical protein BBta_6944 [Bradyrhizobium sp. BTAi1]
gi|146410325|gb|ABQ38831.1| hypothetical protein BBta_6944 [Bradyrhizobium sp. BTAi1]
Length = 170
Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats.
Identities = 64/171 (37%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 1 MSNRVSG---SISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKL 57
MS+R+ G + R S L++E + LVEET+ Y D +G +K L RA+S
Sbjct: 1 MSDRLLGDGALVQFNERLTNSAAFGALFREGMDLVEETAAYLDGDGRNEAKALDRAVSLT 60
Query: 58 YTSESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELP 117
Y +ES+ LTTRLMQ+ SWL L RA+++G MTL Q EK K+K + +LP
Sbjct: 61 YATESMRLTTRLMQLASWLLLHRAVKEGEMTLGQANREKTKVKL-TAADPGPADLLEKLP 119
Query: 118 CFFKNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
++L+ RS LQ R+ LD I+ D+ + G N + + L+A FE
Sbjct: 120 QQLQDLIARSMSLQGRVRRLDATIHSPPPDQSAIG-NPLVPHLNRLKAAFE 169
>gi|146338206|ref|YP_001203254.1| hypothetical protein BRADO1105 [Bradyrhizobium sp. ORS278]
gi|146191012|emb|CAL75017.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 170
Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats.
Identities = 65/171 (38%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 1 MSNRVSG---SISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKL 57
MS+R+ G + R S L++E + LVEET+ Y D EG +K L RA+S
Sbjct: 1 MSDRLLGDGALVQFNERLTNSAAFGALFREGMDLVEETAAYLDGEGRNEAKALDRAVSLT 60
Query: 58 YTSESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELP 117
Y +ES+ LTTRLMQ+ SWL L RA+++G MTL Q EK K+K + +LP
Sbjct: 61 YATESMRLTTRLMQLASWLLLHRAVKEGEMTLGQANREKTKVKL-TAADPGPADLLEKLP 119
Query: 118 CFFKNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
++L+ RS LQ R+ LD I+ D+ + G N + + L+A FE
Sbjct: 120 QQLQDLIARSMSLQGRVRRLDSTIHSPPPDQSAIG-NPLVPHLNRLKAAFE 169
>gi|85714421|ref|ZP_01045409.1| hypothetical protein NB311A_15757 [Nitrobacter sp. Nb-311A]
gi|85698868|gb|EAQ36737.1| hypothetical protein NB311A_15757 [Nitrobacter sp. Nb-311A]
Length = 173
Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats.
Identities = 61/167 (36%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
Query: 2 SNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSE 61
S +G + R S L++E + LVEET+ Y D EG +K L R++S Y +E
Sbjct: 5 STADTGLVQFSERLAGSSVFTTLFREGMDLVEETAAYLDGEGRTEAKALERSVSLTYATE 64
Query: 62 SVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFK 121
S+ LTTRLMQ+ SWL L RA+++G MTL Q EK ++K + +LP +
Sbjct: 65 SMRLTTRLMQLASWLLLHRAVKEGEMTLAQANREKTRVKLTAADPGPQ-DMIAKLPWQLQ 123
Query: 122 NLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
+L+ERS LQ R+ LD I+ + + G N + +Q+ L+ FE
Sbjct: 124 DLIERSMNLQARVRRLDTTIHAPPVERGTVG-NPLVSQLNRLKEAFE 169
>gi|90418930|ref|ZP_01226841.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337010|gb|EAS50715.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 212
Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats.
Identities = 66/167 (39%), Positives = 97/167 (58%), Gaps = 1/167 (0%)
Query: 2 SNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSE 61
++ +I FS + L+ + +ALV+ET+ Y D G + +K L + + LY +E
Sbjct: 44 TSDGDRTIRLAEHLAFSRSFQPLFNQGMALVDETAIYLDGAGRVEAKALSKHGTTLYAAE 103
Query: 62 SVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFK 121
S+ LTTRLMQ+ SWL LQRA G+M+ QV +EK K++ + G P + ELP F+
Sbjct: 104 SMRLTTRLMQVASWLLLQRAANQGDMSRAQVEAEKVKVRLEGLGSAKDSPNYGELPEAFR 163
Query: 122 NLVERSSQLQRRIVLLDQEIYRADFDEISRGP-NHVQTQIKLLEACF 167
+LVER+ L+RRI +LD+EIY + E N V QI LL+ F
Sbjct: 164 DLVERALMLERRIAMLDREIYGENAAEPEHAARNPVGEQIDLLKTAF 210
>gi|13473343|ref|NP_104910.1| hypothetical protein mll3903 [Mesorhizobium loti MAFF303099]
gi|14024092|dbj|BAB50696.1| mll3903 [Mesorhizobium loti MAFF303099]
Length = 177
Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats.
Identities = 72/170 (42%), Positives = 95/170 (55%), Gaps = 4/170 (2%)
Query: 2 SNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSE 61
S + ++ RR+FS K LY+E + LVE+ + Y D +G +K L R + LY +E
Sbjct: 5 SKGSAKTVKLAERRVFSHSFKPLYQEGMGLVEQAAEYLDGKGRAEAKKLSRLAATLYAAE 64
Query: 62 SVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFK 121
S+ LTTRLMQ+ SWL LQRA G MT +QV SEK K++ D + GW ELP F
Sbjct: 65 SMRLTTRLMQVASWLLLQRAANSGEMTRDQVASEKSKVRLDTASAHDEAAGWAELPEEFL 124
Query: 122 NLVERSSQLQRRIVLLDQEIYRADF----DEISRGPNHVQTQIKLLEACF 167
+LV RS +LQ + +D EIY A + R PN V QI LL F
Sbjct: 125 DLVTRSLRLQALVRRMDDEIYGAGAVVDMQPMGRRPNPVSDQISLLNTAF 174
>gi|265999340|ref|ZP_05465880.2| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|263093347|gb|EEZ17416.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
Length = 164
Score = 194 bits (492), Expect = 5e-48, Method: Composition-based stats.
Identities = 67/162 (41%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Query: 8 SISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTT 67
IS R +FS K +Y + + +VEE + Y D EG ++ L R + LY +ES+ LTT
Sbjct: 1 MISLAERMVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAESMRLTT 60
Query: 68 RLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERS 127
RLMQ+ SWL LQRA G MT QV +EK +++ D PGW ELP F +LVERS
Sbjct: 61 RLMQIASWLLLQRAARSGEMTRPQVSAEKAEVRLDTPSAGEAAPGWNELPLAFVDLVERS 120
Query: 128 SQLQRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
+LQ R+ +D+E+Y + N V QI LL+ F
Sbjct: 121 MRLQARVRRMDREVYGEVMALQRVPRGNPVSEQIVLLKTAFG 162
>gi|91978803|ref|YP_571462.1| hypothetical protein RPD_4344 [Rhodopseudomonas palustris BisB5]
gi|91685259|gb|ABE41561.1| protein of unknown function DUF1465 [Rhodopseudomonas palustris
BisB5]
Length = 171
Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats.
Identities = 62/168 (36%), Positives = 90/168 (53%), Gaps = 1/168 (0%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
+S + + R S L++E + LVEET+ Y D +G +KTL R++S Y +
Sbjct: 4 LSQSEAPLVVLSERLTNSAAFTALFREGMDLVEETAAYLDGDGRAEAKTLDRSVSLTYAT 63
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF 120
ES+ LTTRLMQ+ SWL L RA+++G MTL Q EK K+K S +LP
Sbjct: 64 ESMRLTTRLMQLASWLLLHRAVKEGEMTLVQANREKSKVKLSA-ADPSGPDMLEQLPDQL 122
Query: 121 KNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
+ L+ RS LQ RI LD ++ E + N + Q+ +L+A FE
Sbjct: 123 QALIARSMSLQARIRRLDASMHMPPPSERAPIGNPLVPQLNMLKAAFE 170
>gi|319781015|ref|YP_004140491.1| hypothetical protein Mesci_1280 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166903|gb|ADV10441.1| protein of unknown function DUF1465 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 177
Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats.
Identities = 71/170 (41%), Positives = 96/170 (56%), Gaps = 4/170 (2%)
Query: 2 SNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSE 61
S + ++ RR+FS K LY+E + LVE+ + Y D +G +K L R + LY +E
Sbjct: 5 SKGSAKTVKLAERRVFSQSFKPLYQEGMGLVEQAAEYLDGKGRAEAKKLSRLAATLYAAE 64
Query: 62 SVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFK 121
S+ LTTRLMQ+ SWL LQRA G MT +QV SEK K++ D + GW ELP F
Sbjct: 65 SMRLTTRLMQVASWLLLQRAANSGEMTRDQVASEKSKVRLDTASAHDEAAGWAELPEDFL 124
Query: 122 NLVERSSQLQRRIVLLDQEIYRADF----DEISRGPNHVQTQIKLLEACF 167
+LV RS +LQ + +D EIY + ++R PN V QI LL F
Sbjct: 125 DLVTRSLRLQALVRRMDDEIYGSGAMVDMQPMARRPNPVSDQISLLNTAF 174
>gi|75676932|ref|YP_319353.1| hypothetical protein Nwi_2748 [Nitrobacter winogradskyi Nb-255]
gi|74421802|gb|ABA06001.1| Protein of unknown function DUF1465 [Nitrobacter winogradskyi
Nb-255]
Length = 182
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 63/167 (37%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
Query: 2 SNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSE 61
S +G + R S L++E + LVEET+ Y D +G +KTL RA+S Y +E
Sbjct: 5 SAGGTGLVQFSERLAGSSVFTALFREGMDLVEETAAYLDGDGRSEAKTLERAVSLTYATE 64
Query: 62 SVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFK 121
S+ LTTRLMQ+ SWL L RA+++G MTL Q EK ++K + +LP +
Sbjct: 65 SMRLTTRLMQLASWLLLHRAVKEGEMTLAQANREKTRVKLTAADPGPH-DMIAKLPWQLQ 123
Query: 122 NLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
+L+ERS LQ RI LD I+ + + N + +Q+ LL FE
Sbjct: 124 DLIERSMNLQARIRRLDTTIHAPPLERGT-ADNPLVSQLNLLREAFE 169
>gi|260467055|ref|ZP_05813235.1| protein of unknown function DUF1465 [Mesorhizobium opportunistum
WSM2075]
gi|259029164|gb|EEW30460.1| protein of unknown function DUF1465 [Mesorhizobium opportunistum
WSM2075]
Length = 177
Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats.
Identities = 71/170 (41%), Positives = 96/170 (56%), Gaps = 4/170 (2%)
Query: 2 SNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSE 61
S + ++ RR+FS K LY+E + LVE+ + Y D +G +K L R + LY +E
Sbjct: 5 SKGSAKTVKLAERRVFSHSFKPLYQEGMGLVEQAAEYLDGKGRAEAKKLSRLAATLYAAE 64
Query: 62 SVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFK 121
S+ LTTRLMQ+ SWL LQRA G MT +QV SEK K++ D + + GW ELP F
Sbjct: 65 SMRLTTRLMQVASWLLLQRAANSGEMTRDQVASEKSKVRLDTASAHNEAAGWAELPDDFL 124
Query: 122 NLVERSSQLQRRIVLLDQEIYRADF----DEISRGPNHVQTQIKLLEACF 167
+LV RS +LQ + +D+EIY A + R N V QI LL F
Sbjct: 125 DLVTRSLRLQALVRRMDEEIYGASAMVDMQPVVRRANPVSDQISLLNTAF 174
>gi|296445930|ref|ZP_06887881.1| protein of unknown function DUF1465 [Methylosinus trichosporium
OB3b]
gi|296256598|gb|EFH03674.1| protein of unknown function DUF1465 [Methylosinus trichosporium
OB3b]
Length = 178
Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats.
Identities = 60/161 (37%), Positives = 88/161 (54%), Gaps = 1/161 (0%)
Query: 8 SISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTT 67
+S R S L++E +ALVEE + Y D G +K+LPR + Y +ES+ LTT
Sbjct: 14 PVSFAERLAGSEAFGALFREGMALVEEAAAYLDGSGRDDAKSLPRPEALAYAAESMRLTT 73
Query: 68 RLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERS 127
RLMQ+ SWL LQRA+ G +T Q S+K K++ L S ++ LP ++L S
Sbjct: 74 RLMQIASWLLLQRAVNQGEITRVQAASDKHKVRLSQQELASNPEIFSHLPEKLRDLAIHS 133
Query: 128 SQLQRRIVLLDQEIYRADFDEI-SRGPNHVQTQIKLLEACF 167
+LQ R++ LDQ IY A + P+ V+ Q++ L F
Sbjct: 134 LRLQARVIHLDQLIYGASVAPQRTTEPSPVEAQLQKLRNAF 174
>gi|300023963|ref|YP_003756574.1| hypothetical protein Hden_2456 [Hyphomicrobium denitrificans ATCC
51888]
gi|299525784|gb|ADJ24253.1| protein of unknown function DUF1465 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 182
Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats.
Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 1/161 (0%)
Query: 8 SISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTT 67
++S R S + +++E +ALVE T+ Y D G +K L + LY +ES+ LTT
Sbjct: 17 TVSFGERFQSSEQFDHIFREGMALVERTASYLDGPGRKEAKNLNGSAGVLYATESMRLTT 76
Query: 68 RLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERS 127
RL+ + SWL ++RAL +G +T E+ ++ ++K G S V G+ +LP + L+E S
Sbjct: 77 RLLDLASWLLIRRALREGEITDEEAQKKRRRVKLQAFGRPSHVKGFPDLPNGLRGLIEES 136
Query: 128 SQLQRRIVLLDQEIYRADFDEI-SRGPNHVQTQIKLLEACF 167
L RI LD+ + + D E + N V Q+ LLE F
Sbjct: 137 FALHDRISQLDRAMSKPDDSEALTGAANPVAQQVGLLERAF 177
>gi|39933994|ref|NP_946270.1| AraC family transcriptional regulator [Rhodopseudomonas palustris
CGA009]
gi|39647841|emb|CAE26361.1| probable transcriptional regulator, AraC family [Rhodopseudomonas
palustris CGA009]
Length = 169
Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats.
Identities = 63/172 (36%), Positives = 88/172 (51%), Gaps = 6/172 (3%)
Query: 1 MSNRVSG---SISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKL 57
MS+ G + R S L++E + LVEET+ Y D +G +K L RA+S
Sbjct: 1 MSDVAQGESALVVLSERLTSSAAFTALFREGMDLVEETAAYLDGDGRAEAKQLDRAVSLS 60
Query: 58 YTSESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELP 117
Y +ES+ LTTRLMQ+ SWL L RA+++G MTL Q EK K+K LP
Sbjct: 61 YATESMRLTTRLMQLASWLLLHRAVKEGEMTLIQANREKTKVKLSA-ADPGAPDVLERLP 119
Query: 118 CFFKNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFEN 169
++L+ RS LQ RI LD ++ N + Q+ +L+A FEN
Sbjct: 120 EQLQSLIARSMSLQSRIRRLDSTMHTPPEPPAL--GNPLVPQLNMLKAAFEN 169
>gi|92119006|ref|YP_578735.1| hypothetical protein Nham_3546 [Nitrobacter hamburgensis X14]
gi|91801900|gb|ABE64275.1| protein of unknown function DUF1465 [Nitrobacter hamburgensis X14]
Length = 173
Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats.
Identities = 57/163 (34%), Positives = 86/163 (52%), Gaps = 2/163 (1%)
Query: 6 SGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLL 65
+G + R S L++E + LVE T+ Y D +G ++TL R++S Y +ES+ L
Sbjct: 9 TGLVQFSERLAGSSAFTALFREGMDLVEATAAYLDGDGRTDARTLERSVSLTYATESMRL 68
Query: 66 TTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVE 125
TTRLMQ+ SWL L RA+++G MTL Q EK ++K + +LP ++L+
Sbjct: 69 TTRLMQLASWLLLHRAVKEGEMTLAQANREKTRVKLTAADPGPQ-DMVGKLPGPLQDLIA 127
Query: 126 RSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
RS LQ R+ LD I+ E N + Q+ L+ FE
Sbjct: 128 RSMNLQVRVRRLDTTIH-TPAAERGPAGNPLMPQLNRLKEAFE 169
>gi|316932459|ref|YP_004107441.1| hypothetical protein Rpdx1_1082 [Rhodopseudomonas palustris DX-1]
gi|315600173|gb|ADU42708.1| protein of unknown function DUF1465 [Rhodopseudomonas palustris
DX-1]
Length = 169
Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 64/172 (37%), Positives = 88/172 (51%), Gaps = 6/172 (3%)
Query: 1 MSNRVSG---SISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKL 57
MS+ G + R S L++E + LVEET+ Y D EG +K L RA+S
Sbjct: 1 MSDVAQGESALVVLSERLTSSAAFTALFREGMDLVEETAAYLDGEGRAEAKLLDRAVSLT 60
Query: 58 YTSESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELP 117
Y +ES+ LTTRLMQ+ SWL L RA+++G MTL Q EK K+K LP
Sbjct: 61 YATESMRLTTRLMQLASWLLLHRAVKEGEMTLIQANREKTKVKLSA-ADPGAPDVLERLP 119
Query: 118 CFFKNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFEN 169
++L+ RS LQ RI LD ++ N + Q+ +L+A FEN
Sbjct: 120 EQLQSLIARSMNLQSRIRRLDSSMHTPPEPVAV--GNPLVPQLNMLKAAFEN 169
>gi|192289414|ref|YP_001990019.1| hypothetical protein Rpal_0987 [Rhodopseudomonas palustris TIE-1]
gi|192283163|gb|ACE99543.1| protein of unknown function DUF1465 [Rhodopseudomonas palustris
TIE-1]
Length = 169
Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats.
Identities = 61/169 (36%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
++ S + R S L++E + LVEET+ Y D +G +K L RA+S Y +
Sbjct: 4 VAQSESALVVLSERLTSSAAFTALFREGMDLVEETAAYLDGDGRAEAKQLDRAVSLSYAT 63
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF 120
ES+ LTTRLMQ+ SWL L RA+++G MTL Q EK K+K LP
Sbjct: 64 ESMRLTTRLMQLASWLLLHRAVKEGEMTLIQANREKTKVKLSA-ADPGAPDVLERLPEQL 122
Query: 121 KNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFEN 169
++L+ RS LQ RI LD ++ N + Q+ +L+A FEN
Sbjct: 123 QSLIARSMSLQSRIRRLDSTMHTPPEPPAL--GNPLVPQLNMLKAAFEN 169
>gi|27376617|ref|NP_768146.1| hypothetical protein blr1506 [Bradyrhizobium japonicum USDA 110]
gi|27349758|dbj|BAC46771.1| blr1506 [Bradyrhizobium japonicum USDA 110]
Length = 169
Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats.
Identities = 60/160 (37%), Positives = 86/160 (53%), Gaps = 2/160 (1%)
Query: 9 ISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTR 68
+ R S L++E + LVEET+ Y D G +K L RA+S Y +ES+ LTTR
Sbjct: 11 VQLSERFTNSAAFGTLFREGMDLVEETAAYLDGAGRTEAKALDRAVSLTYATESMRLTTR 70
Query: 69 LMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSS 128
LMQ+ SWL L RA+++G MTL Q EK K+K + +LP ++L+ RS
Sbjct: 71 LMQLASWLLLHRAVKEGEMTLVQANREKTKVKLSAADPGP-ADTIEKLPSQLQDLIHRSM 129
Query: 129 QLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
LQ R+ LD I+ + I+ G N + + L+A FE
Sbjct: 130 SLQTRVRRLDTTIHTPPAEHIAIG-NPLVPHLNALKAAFE 168
>gi|326539425|gb|ADZ87640.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 157
Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats.
Identities = 64/155 (41%), Positives = 88/155 (56%), Gaps = 1/155 (0%)
Query: 15 RLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVS 74
+FS K +Y + + +VEE + Y D EG ++ L R + LY +ES+ LTTRLMQ+ S
Sbjct: 1 MVFSDSFKPIYAQGMDMVEEAASYLDGEGREEARNLSRVAATLYAAESMRLTTRLMQIAS 60
Query: 75 WLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRI 134
WL LQRA G MT QV +EK +++ D PGW ELP F +LVERS +LQ R+
Sbjct: 61 WLLLQRAARSGEMTRPQVSAEKAEVRLDTPSAGEAAPGWNELPLAFVDLVERSMRLQARV 120
Query: 135 VLLDQEIYRADFD-EISRGPNHVQTQIKLLEACFE 168
+D+E+Y + N V QI LL+ F
Sbjct: 121 RRMDREVYGEVMALQRVPRGNPVSEQIVLLKTAFG 155
>gi|86751590|ref|YP_488086.1| hypothetical protein RPB_4492 [Rhodopseudomonas palustris HaA2]
gi|86574618|gb|ABD09175.1| Protein of unknown function DUF1465 [Rhodopseudomonas palustris
HaA2]
Length = 171
Score = 187 bits (474), Expect = 6e-46, Method: Composition-based stats.
Identities = 60/168 (35%), Positives = 87/168 (51%), Gaps = 1/168 (0%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
+S + + R S L++E + LVEET+ Y D +G +K L R +S Y +
Sbjct: 4 VSQSEAPLVVLSERLTNSAAFTALFREGMDLVEETAAYLDGDGRAEAKMLERTVSLTYAT 63
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF 120
ES+ LTTRLMQ+ SWL L RA+++G MTL Q EK K+K LP
Sbjct: 64 ESMRLTTRLMQLASWLLLHRAVKEGEMTLIQANREKSKVKLSA-ADPGAPDMLERLPEQL 122
Query: 121 KNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
++L+ RS LQ RI LD ++ E + N + Q+ +L+A FE
Sbjct: 123 QSLIARSMSLQARIRRLDASMHLPPPSERAAIGNPLVPQLNMLKAAFE 170
>gi|218530585|ref|YP_002421401.1| hypothetical protein Mchl_2633 [Methylobacterium chloromethanicum
CM4]
gi|240138942|ref|YP_002963417.1| putative transcriptional regulator, AraC family [Methylobacterium
extorquens AM1]
gi|254561550|ref|YP_003068645.1| AraC family transcriptional regulator [Methylobacterium extorquens
DM4]
gi|218522888|gb|ACK83473.1| protein of unknown function DUF1465 [Methylobacterium
chloromethanicum CM4]
gi|240008914|gb|ACS40140.1| putative transcriptional regulator, AraC family [Methylobacterium
extorquens AM1]
gi|254268828|emb|CAX24789.1| putative transcriptional regulator, AraC family [Methylobacterium
extorquens DM4]
Length = 177
Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats.
Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 3/162 (1%)
Query: 9 ISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTR 68
+S + S K L++E + LVEET+ Y D EG S+ + R + Y SES+ LTTR
Sbjct: 15 VSFGQSYVTSEGFKTLFREGMLLVEETAAYLDGEGRSESRLISRDATLAYASESMRLTTR 74
Query: 69 LMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYS--GLDSTVPGWTELPCFFKNLVER 126
LMQ+ SWL +QRA+ +G ++L Q EK ++K L +T LP ++LV R
Sbjct: 75 LMQIASWLLVQRAVSEGEISLVQAQEEKTRVKLAEPERALPEAGDAFTTLPLRLQDLVRR 134
Query: 127 SSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
S +L RI+ LD I + R + V Q L A F
Sbjct: 135 SRRLHSRILHLDALISEDRPAPVPR-ESPVTAQFGRLRAAFG 175
>gi|188581563|ref|YP_001925008.1| hypothetical protein Mpop_2311 [Methylobacterium populi BJ001]
gi|179345061|gb|ACB80473.1| protein of unknown function DUF1465 [Methylobacterium populi BJ001]
Length = 177
Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats.
Identities = 60/162 (37%), Positives = 86/162 (53%), Gaps = 3/162 (1%)
Query: 9 ISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTR 68
+S + S K L++E + LVEET+ Y D EG S+ + R + Y SES+ LTTR
Sbjct: 15 VSFGESYVSSEAFKTLFREGMLLVEETAAYLDGEGRAESRLISRDATLAYASESMRLTTR 74
Query: 69 LMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYS--GLDSTVPGWTELPCFFKNLVER 126
LMQ+ SWL +QRA+ +G ++L Q EK ++K S L + ELP ++LV R
Sbjct: 75 LMQIASWLLVQRAVSEGEISLSQAQEEKTRVKLAESERTLPEAGDTFAELPLRLQDLVRR 134
Query: 127 SSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
S +L RI+ LD I + R + V Q L+A F
Sbjct: 135 SRRLHTRILHLDALISEDRPAPVPR-ESPVTAQFGRLQAAFG 175
>gi|163851777|ref|YP_001639820.1| hypothetical protein Mext_2354 [Methylobacterium extorquens PA1]
gi|163663382|gb|ABY30749.1| protein of unknown function DUF1465 [Methylobacterium extorquens
PA1]
Length = 177
Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats.
Identities = 58/162 (35%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 9 ISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTR 68
+S + S K L++E + LVEET+ Y D EG S+ + R + Y SES+ LTTR
Sbjct: 15 VSFGQSYVTSEGFKTLFREGMLLVEETAAYLDGEGRSESRLISRDATLAYASESMRLTTR 74
Query: 69 LMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYS--GLDSTVPGWTELPCFFKNLVER 126
LMQ+ SWL +QRA+ +G ++L Q EK ++K L + LP ++LV R
Sbjct: 75 LMQIASWLLVQRAVSEGEISLVQAQEEKTRVKLAEPERALPEAGDAFATLPLRLQDLVRR 134
Query: 127 SSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
S +L RI+ LD I + R + V Q L A F
Sbjct: 135 SRRLHSRILHLDALISEDRPAPVPR-ESPVTAQFGRLRAAFG 175
>gi|90422312|ref|YP_530682.1| hypothetical protein RPC_0792 [Rhodopseudomonas palustris BisB18]
gi|90104326|gb|ABD86363.1| protein of unknown function DUF1465 [Rhodopseudomonas palustris
BisB18]
Length = 170
Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats.
Identities = 59/171 (34%), Positives = 87/171 (50%), Gaps = 5/171 (2%)
Query: 1 MSNRVSG---SISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKL 57
MS + G + R S L+++ + LVEET+ Y D G +K L R++S
Sbjct: 1 MSESMQGNSALVHFSERLTNSAAFSTLFRDGMDLVEETASYLDGVGRTEAKALDRSVSLT 60
Query: 58 YTSESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELP 117
Y +ES+ LTTRLMQ+ SWL L RA+++G MTL Q EK K+K + +LP
Sbjct: 61 YATESMRLTTRLMQLASWLLLHRAVKEGEMTLSQANREKTKVKLSAAEPGP-AEMIEKLP 119
Query: 118 CFFKNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
+ L+ RS LQ ++ LD ++ D G N + + L+A FE
Sbjct: 120 EHLQELIARSMLLQDKVRRLDTTMHADGSDRAPIG-NPLVPHLNRLKAAFE 169
>gi|299134150|ref|ZP_07027343.1| protein of unknown function DUF1465 [Afipia sp. 1NLS2]
gi|298590897|gb|EFI51099.1| protein of unknown function DUF1465 [Afipia sp. 1NLS2]
Length = 168
Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats.
Identities = 61/169 (36%), Positives = 90/169 (53%), Gaps = 3/169 (1%)
Query: 1 MSNRV-SGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYT 59
MS++ G I S + L+++ + LVEET+ Y D EG +K+L RA+ Y
Sbjct: 1 MSDQAQDGLILLSEHFTNSAAFQDLFRDGMNLVEETAAYLDGEGRTEAKSLERAVGLTYA 60
Query: 60 SESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCF 119
+ES+ LTTRLMQ+ SWL L RA+ +G MTL Q EK K+K + +LP
Sbjct: 61 TESMRLTTRLMQLASWLLLHRAVREGEMTLNQANREKTKVKL-TAAEPGATDLIEKLPSQ 119
Query: 120 FKNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
+ L+ RS +LQ ++ LD ++ D + G N + Q+ L A FE
Sbjct: 120 LQALITRSMELQAKVRRLDATMHAEKTDAGAPG-NPLMPQLDRLRAAFE 167
>gi|220923252|ref|YP_002498554.1| hypothetical protein Mnod_3328 [Methylobacterium nodulans ORS 2060]
gi|219947859|gb|ACL58251.1| protein of unknown function DUF1465 [Methylobacterium nodulans ORS
2060]
Length = 177
Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats.
Identities = 56/169 (33%), Positives = 83/169 (49%), Gaps = 2/169 (1%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
M +++ + S + L++E + LVEET+ Y D G S+ L R + Y S
Sbjct: 7 MFRDPRETVNFGETFVASDAFRTLFREGMTLVEETAAYLDGPGRDESRLLARHAALSYAS 66
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVP-GWTELPCF 119
ES+ LTTRLMQ+ SWL +QRA+ +G ++L + EK +++ + T ELP
Sbjct: 67 ESMRLTTRLMQIASWLLVQRAVSEGELSLSEAQQEKTRVRLGANEGPETSAVVLAELPLS 126
Query: 120 FKNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
+ L+E S +L RI LD I R + V Q LL A F
Sbjct: 127 LQALIEHSKRLHARIRHLDSLISDDRPTPAPR-ESPVFAQHDLLRAAFR 174
>gi|16127525|ref|NP_422089.1| hypothetical protein CC_3295 [Caulobacter crescentus CB15]
gi|221236340|ref|YP_002518777.1| regulator of CtrA degradation rcdA [Caulobacter crescentus NA1000]
gi|254220906|pdb|3CTW|B Chain B, Crystal Structure Of Rcda From Caulobacter Crescentus Cb15
gi|254220907|pdb|3CTW|D Chain D, Crystal Structure Of Rcda From Caulobacter Crescentus Cb15
gi|13424989|gb|AAK25257.1| hypothetical protein CC_3295 [Caulobacter crescentus CB15]
gi|89258035|gb|ABD65268.1| regulator of CtrA degradation [Caulobacter crescentus CB15]
gi|220965513|gb|ACL96869.1| regulator of CtrA degradation rcdA [Caulobacter crescentus NA1000]
Length = 169
Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats.
Identities = 55/154 (35%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 15 RLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVS 74
S ++E + LVEET+ Y D G SK L R + Y +ES+ LTTRLMQ+ S
Sbjct: 20 FARSELFDRTFEEGMQLVEETAAYLDGAGRHDSKVLSRNAALGYATESMRLTTRLMQVAS 79
Query: 75 WLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRI 134
WL +QRA+ +G M E +E ++ + + P ELP NL++RS +L R+
Sbjct: 80 WLLVQRAVREGEMPPEAACAEAYRLAEEAP---ADGPAVEELPFGLMNLLQRSERLYERV 136
Query: 135 VLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
LD+ +Y +E P VQ Q+ L A F
Sbjct: 137 RHLDRRMYVESPNE--EAPRPVQNQLDRLTAAFG 168
>gi|170742450|ref|YP_001771105.1| hypothetical protein M446_4328 [Methylobacterium sp. 4-46]
gi|168196724|gb|ACA18671.1| protein of unknown function DUF1465 [Methylobacterium sp. 4-46]
Length = 176
Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats.
Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 2/170 (1%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
M +++ + S + L++E + LVEET+ Y D G S+ L R + Y S
Sbjct: 7 MFRDPRDTVNFGETFVSSEAFRTLFREGMTLVEETAAYLDGPGRDESRLLSRHAALTYAS 66
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYS-GLDSTVPGWTELPCF 119
ES+ LTTRLMQ+ SWL +QRA+ +G +TL + EK +++ S D ELP
Sbjct: 67 ESMRLTTRLMQIASWLLVQRAVAEGELTLSEAQQEKTRVRLGASESQDLPAAAVAELPLT 126
Query: 120 FKNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFEN 169
+ L+ + +L RI LD I R + V Q LL A F +
Sbjct: 127 LQALIGHAKRLHARIRHLDSLISDDRPTPAPR-ESPVFAQQDLLRAAFRS 175
>gi|209886434|ref|YP_002290291.1| probable transcriptional regulator, AraC family [Oligotropha
carboxidovorans OM5]
gi|209874630|gb|ACI94426.1| probable transcriptional regulator, AraC family [Oligotropha
carboxidovorans OM5]
Length = 167
Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats.
Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 4/170 (2%)
Query: 1 MSNRV-SGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYT 59
MS++ G I S + L+++ + LVEET+ Y D +G + +K L RA+ Y
Sbjct: 1 MSDQAQDGLILLSEHFTNSPAFQELFRDGMDLVEETAAYLDGDGRIEAKALERAVGLTYA 60
Query: 60 SESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCF 119
+ES+ LTTRLMQ+ SWL L RA+ +G MTL Q EK K++ + T LP
Sbjct: 61 TESMRLTTRLMQLASWLLLHRAVREGEMTLNQANREKTKVRL-TAAEPGAADLITRLPER 119
Query: 120 FKNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFEN 169
+ L+ RS +LQ ++ LD ++ D++ N + Q+ L A FEN
Sbjct: 120 LQQLITRSMELQTKVRRLDATMHAERKDDV--AGNPLMPQLDRLRAAFEN 167
>gi|295688063|ref|YP_003591756.1| hypothetical protein Cseg_0626 [Caulobacter segnis ATCC 21756]
gi|295429966|gb|ADG09138.1| protein of unknown function DUF1465 [Caulobacter segnis ATCC 21756]
Length = 169
Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats.
Identities = 56/154 (36%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Query: 15 RLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVS 74
S ++E + LVEET+ Y D G SK L R + Y SES+ LTTRLMQ+ S
Sbjct: 20 FARSELFDRTFEEGMQLVEETAAYLDGAGRHDSKILSRNAALSYASESMRLTTRLMQVAS 79
Query: 75 WLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRI 134
WL +QRA+ +G M E +E ++ + G + ELP NL+ RS +L R+
Sbjct: 80 WLLVQRAVREGEMPPEAACAENYRMAEEAIGDPAP---IEELPFGLTNLLHRSERLYERV 136
Query: 135 VLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
LD+ +Y E P VQ Q L A F
Sbjct: 137 RHLDRRMYVESPSE--EAPRPVQAQFDRLTAAFG 168
>gi|114705057|ref|ZP_01437965.1| hypothetical protein FP2506_08971 [Fulvimarina pelagi HTCC2506]
gi|114539842|gb|EAU42962.1| hypothetical protein FP2506_08971 [Fulvimarina pelagi HTCC2506]
Length = 162
Score = 180 bits (456), Expect = 7e-44, Method: Composition-based stats.
Identities = 66/158 (41%), Positives = 97/158 (61%), Gaps = 1/158 (0%)
Query: 11 CLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLM 70
+ S + ++ E + LV+ET+ Y D EG SK LP+++S LY +ES+ LTTRLM
Sbjct: 3 LAEHKAHSRAFQPIFDEGMTLVDETANYLDGEGRTASKALPKSVSTLYAAESMRLTTRLM 62
Query: 71 QMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQL 130
QM SWL LQRAL +G+MT QV SEK+K++ + S+ + LP F++LV R++ L
Sbjct: 63 QMASWLLLQRALNEGDMTRAQVESEKKKVRLNSEVETSSDANYVHLPDEFRDLVMRATLL 122
Query: 131 QRRIVLLDQEIYRADFD-EISRGPNHVQTQIKLLEACF 167
+RRI +LD+E+Y + + N V QI LL+ F
Sbjct: 123 ERRIAILDRELYGVSRNIDERPIGNPVGEQINLLKTVF 160
>gi|217977194|ref|YP_002361341.1| protein of unknown function DUF1465 [Methylocella silvestris BL2]
gi|217502570|gb|ACK49979.1| protein of unknown function DUF1465 [Methylocella silvestris BL2]
Length = 179
Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats.
Identities = 60/165 (36%), Positives = 86/165 (52%), Gaps = 1/165 (0%)
Query: 4 RVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESV 63
+ G++S + S + L+KE + LV + Y D EG ++ LPR ++ Y ES+
Sbjct: 9 KTEGAVSFGEKLAASDQFVALFKEGMDLVGAAAAYLDGEGRKEAQALPRPVALAYAVESM 68
Query: 64 LLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNL 123
LTTRLMQ+ SWL LQRA+ +G ++ + SEK +I+ S+ TELP L
Sbjct: 69 RLTTRLMQIASWLLLQRAVNEGELSRAEAASEKRRIRLARQDAVSSEDLLTELPRRLCEL 128
Query: 124 VERSSQLQRRIVLLDQEIYRADF-DEISRGPNHVQTQIKLLEACF 167
VE S ++Q RI LD IY S + V QI L+A F
Sbjct: 129 VELSLRVQARIRHLDGLIYDPAPGARPSMPKSPVAGQIAQLQAAF 173
>gi|170751740|ref|YP_001758000.1| hypothetical protein Mrad2831_5370 [Methylobacterium radiotolerans
JCM 2831]
gi|170658262|gb|ACB27317.1| protein of unknown function DUF1465 [Methylobacterium radiotolerans
JCM 2831]
Length = 176
Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats.
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 2/160 (1%)
Query: 9 ISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTR 68
+ + S K L+++ + LVEET+ Y D EG S+ + R + Y +ES+ LTT
Sbjct: 15 VDFGRSYVNSEAFKALFRDGMTLVEETAAYLDGEGRDESRLVSRDATLSYAAESMRLTTL 74
Query: 69 LMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSS 128
LMQ+ SWL +QRA+ +G MT + + EK ++K + + LP + L+ R+
Sbjct: 75 LMQIASWLLVQRAVAEGEMTPAEALQEKHRVKLGTAEPPKQQD-FNLLPMRLQQLIVRAR 133
Query: 129 QLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
+L RI+ LD I + V Q LL F
Sbjct: 134 RLHSRILHLDALIAEDRPTP-QPVESPVAAQQGLLRMAFR 172
>gi|315498725|ref|YP_004087529.1| hypothetical protein Astex_1712 [Asticcacaulis excentricus CB 48]
gi|315416737|gb|ADU13378.1| protein of unknown function DUF1465 [Asticcacaulis excentricus CB
48]
Length = 172
Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 10/176 (5%)
Query: 1 MSNRVSGSISCLNR------RLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAI 54
MS+ + +S R S ++E + LVEET+ Y D +G S+ L R
Sbjct: 1 MSDTGA-VVSLSQRADLVRDFARSDLFDRTFREGMGLVEETASYLDGDGRRDSRILSRED 59
Query: 55 SKLYTSESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWT 114
+ LY ES+ LTTRLMQ+ SWL +QRA+ +G+M EK ++ +
Sbjct: 60 ALLYAGESMRLTTRLMQIASWLLVQRAVREGDMEATDACDEKYRLS--AAAQSEYGDQLK 117
Query: 115 ELPCFFKNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFENF 170
LP L++RS++L RI LD+ ++ + + N V Q+ LL F N
Sbjct: 118 VLPQGLLELLDRSNRLYDRISHLDRRMFVEAEADKPQT-NPVLDQMALLRNTFGNL 172
>gi|323136228|ref|ZP_08071310.1| protein of unknown function DUF1465 [Methylocystis sp. ATCC 49242]
gi|322398302|gb|EFY00822.1| protein of unknown function DUF1465 [Methylocystis sp. ATCC 49242]
Length = 177
Score = 177 bits (448), Expect = 6e-43, Method: Composition-based stats.
Identities = 56/164 (34%), Positives = 85/164 (51%), Gaps = 2/164 (1%)
Query: 6 SGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLL 65
+ +S + + S +++E + LVEE + Y D G +K+LPRA + Y +ES+ L
Sbjct: 12 AEPVSFVEKLAGSEAFGAMFREGMGLVEEAAAYLDGPGREEAKSLPRAEALAYAAESMRL 71
Query: 66 TTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVE 125
TTRLMQ+ SWL LQRA+ G +T Q S++ ++K L S + LP ++L
Sbjct: 72 TTRLMQIASWLLLQRAVNQGELTRTQAASDRHRVKLHQQELASAPDLFNRLPQRLRDLSL 131
Query: 126 RSSQLQRRIVLLDQEIYRADF--DEISRGPNHVQTQIKLLEACF 167
S +LQ RI+ LDQ Y E + V+ Q+ L F
Sbjct: 132 HSLRLQARIIHLDQLFYAPAELTVEKMPPASPVEAQLAKLREAF 175
>gi|121602318|ref|YP_988491.1| hypothetical protein BARBAKC583_0153 [Bartonella bacilliformis
KC583]
gi|120614495|gb|ABM45096.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 172
Score = 176 bits (447), Expect = 7e-43, Method: Composition-based stats.
Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 1/165 (0%)
Query: 6 SGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLL 65
I + F LY+E++ L+EET+ Y D+ G ++ L S LY E++ L
Sbjct: 9 DKPIIMIEHDAFENAFNRLYEEAMNLIEETAAYIDQNGKFATRDLSVETSALYVKEAMYL 68
Query: 66 TTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVE 125
+TRLMQ+ S L L RA +G M EQ+ E KI L + W ELP F++ V
Sbjct: 69 STRLMQIASRLLLFRAGREGEMLPEQIEKEIAKISLHTPSLGPDIAHWQELPEIFRSFVV 128
Query: 126 RSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFENF 170
RS L++R+ + + + N V Q++LL+ F +F
Sbjct: 129 RSLSLEKRVYHM-RYDSNYVSSKSLEDKNPVNKQLELLKNAFRHF 172
>gi|312115893|ref|YP_004013489.1| hypothetical protein Rvan_3195 [Rhodomicrobium vannielii ATCC
17100]
gi|311221022|gb|ADP72390.1| protein of unknown function DUF1465 [Rhodomicrobium vannielii ATCC
17100]
Length = 175
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 2/159 (1%)
Query: 9 ISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTR 68
+S +R S + LY+E + LVE T+ Y D +G SKTL S Y+SES+ LTTR
Sbjct: 16 LSFGDRFTTSPQFAKLYREGMDLVERTAEYLDGQGRAESKTLTPPASFAYSSESIRLTTR 75
Query: 69 LMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSS 128
L Q+ SWL ++RA+ G +T + + + ++ G+ LP F+ L+ S
Sbjct: 76 LTQLASWLLVRRAIAAGEITAAEAHNHRHRVTLSPQSTTL-PEGFDALPKTFRFLIAESQ 134
Query: 129 QLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACF 167
+L RI+ L++ I+ + + + QI+ + F
Sbjct: 135 RLHDRIMRLER-IFSDGAVAANEMASPIGPQIERIRLAF 172
>gi|163869139|ref|YP_001610378.1| hypothetical protein Btr_2384 [Bartonella tribocorum CIP 105476]
gi|161018825|emb|CAK02383.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 172
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 6 SGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLL 65
I + F LY+E++AL+E+T+ Y D EG +++++L IS LY E++ L
Sbjct: 9 DEPIIMIEHNAFENAFNRLYEETMALIEKTAAYIDSEGKVVARSLSAEISALYAKEAMYL 68
Query: 66 TTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVE 125
+TRLMQ+ S L L RA +G M+ EQ+ E K+ L+ W ELP F+ V
Sbjct: 69 STRLMQIASQLLLLRAEREGEMSPEQIKKEIVKVSLHTPTLEFETAHWDELPEIFRQFVA 128
Query: 126 RSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
S +L+ RI + + + N V QI+LL+ F
Sbjct: 129 HSLRLEARIKYM-RAGWETAASCDLSDENPVGKQIELLKTAFG 170
>gi|114571121|ref|YP_757801.1| hypothetical protein Mmar10_2577 [Maricaulis maris MCS10]
gi|114341583|gb|ABI66863.1| protein of unknown function DUF1465 [Maricaulis maris MCS10]
Length = 175
Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats.
Identities = 52/154 (33%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
Query: 15 RLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVS 74
S + L++E + +VEET+ Y D G SK+L RA + Y +ES+ LTTRLMQ S
Sbjct: 23 FAASEMFQKLFREGMDMVEETASYLDGPGRDDSKSLDRAGALSYATESMKLTTRLMQAAS 82
Query: 75 WLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRI 134
WL QRA+ +G M+ E K ++ D + G P +LV RS L R+
Sbjct: 83 WLLAQRAVAEGEMSAEAATDGKYRLTADRPDENLWPDG-ETPPAVLGDLVRRSRSLYARL 141
Query: 135 VLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
+D +Y E N V Q+ +L F
Sbjct: 142 KRIDDNLYVDGVIEAE--ANPVADQMAMLRGAFG 173
>gi|154252541|ref|YP_001413365.1| hypothetical protein Plav_2094 [Parvibaculum lavamentivorans DS-1]
gi|154156491|gb|ABS63708.1| protein of unknown function DUF1465 [Parvibaculum lavamentivorans
DS-1]
Length = 196
Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 2/157 (1%)
Query: 12 LNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQ 71
L + S + Y E + LVEETS Y D G ++ LPR S Y ES+ LTTRLMQ
Sbjct: 22 LAEFMASGLFQRTYNEGMRLVEETSAYLDGPGRQAARGLPREASLAYAGESMRLTTRLMQ 81
Query: 72 MVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQ 131
+ SWL +++A+ +G M+ E+ SEK ++ G LP + L+ RS +L
Sbjct: 82 VASWLLVRKAVHEGEMSAEEANSEKYRLATKEIARQPRFDGVDTLPQPLQELIGRSERLY 141
Query: 132 RRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
R+ LD + R I++ + + Q++ +E F
Sbjct: 142 ARVERLDARL-REGVSPIAQD-HPLAEQLRRVELFFR 176
>gi|83859945|ref|ZP_00953465.1| hypothetical protein OA2633_08089 [Oceanicaulis alexandrii
HTCC2633]
gi|83852304|gb|EAP90158.1| hypothetical protein OA2633_08089 [Oceanicaulis alexandrii
HTCC2633]
Length = 170
Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 6/172 (3%)
Query: 1 MSNRVSGSISCLNR---RLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKL 57
M+ + S R S + L+++ + LVEET+ Y D G +K L R+ +
Sbjct: 1 MTPVTPHAASTAARVSDFADSEMFRRLFRDGMDLVEETAAYLDGPGRDDAKRLGRSGALA 60
Query: 58 YTSESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELP 117
Y SES+ LTT+LMQ SWL QRA+ +G+M+ + E+ ++ + + G P
Sbjct: 61 YASESMGLTTQLMQCASWLLTQRAVAEGDMSPREAAEERYRLSPNKFSPPTWPAGDDPCP 120
Query: 118 CFFKNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFEN 169
+L R+ +L R++ LD ++ A+ + N V Q+ L A F +
Sbjct: 121 PRLGDLALRARELHERLMRLDDSLFEAELKPV---ENPVANQLSQLSAAFSD 169
>gi|167644881|ref|YP_001682544.1| hypothetical protein Caul_0915 [Caulobacter sp. K31]
gi|167347311|gb|ABZ70046.1| protein of unknown function DUF1465 [Caulobacter sp. K31]
Length = 168
Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats.
Identities = 52/154 (33%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 15 RLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVS 74
S ++E + LVEET+ Y D G SK L R + Y SES+ LTTRLMQ+ S
Sbjct: 19 FARSELFDRTFEEGMTLVEETAAYLDGAGRHDSKILSRNAALAYASESMRLTTRLMQVAS 78
Query: 75 WLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRI 134
WL +QRA+++G M E ++ ++ + +LP NL++RS +L R+
Sbjct: 79 WLLVQRAVKEGEMAAEAACADNYRLGLEAGEPAP----VEDLPFGLVNLLQRSERLYERV 134
Query: 135 VLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
LD+ +Y E P VQ L A F
Sbjct: 135 RHLDKRMYVEAGTE--EAPRPVQAHFDRLSAAFG 166
>gi|254295312|ref|YP_003061335.1| hypothetical protein Hbal_2970 [Hirschia baltica ATCC 49814]
gi|254043843|gb|ACT60638.1| protein of unknown function DUF1465 [Hirschia baltica ATCC 49814]
Length = 180
Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats.
Identities = 50/151 (33%), Positives = 79/151 (52%), Gaps = 5/151 (3%)
Query: 14 RRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMV 73
S L+KE +ALVEE + Y D G S+ L R + +Y +ES+ +TTRLMQ
Sbjct: 17 EFASSEVFDRLFKEGMALVEEAAAYLDGPGRQQSRQLDREKALVYAAESMEVTTRLMQSA 76
Query: 74 SWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRR 133
SWL +QRA+ +G+MT ++ +K ++ G + LP ++LV RS L R
Sbjct: 77 SWLVVQRAVREGDMTSDEAGEDKFRLS--APGELRQLTAVEHLPEMLQDLVVRSRALYER 134
Query: 134 IVLLDQEIYRADFDEISRGPNHVQTQIKLLE 164
+ LD+ ++ E + N V Q++ L+
Sbjct: 135 VWRLDETLF---AVEETPTENPVGNQLQRLQ 162
>gi|240851227|ref|YP_002972630.1| hypothetical protein Bgr_18320 [Bartonella grahamii as4aup]
gi|240268350|gb|ACS51938.1| hypothetical protein Bgr_18320 [Bartonella grahamii as4aup]
Length = 172
Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats.
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 6 SGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLL 65
I + F LY+E++AL+E+T+ Y D EG L++++L +S +Y E++ L
Sbjct: 9 DEPIIMIEHNAFENAFNRLYEETMALIEKTAAYIDSEGKLVARSLSAEVSAIYAKEAMYL 68
Query: 66 TTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVE 125
+TRLMQ+ S L L RA +G M+ EQ+ E K+ L+ P W ELP F+ V
Sbjct: 69 STRLMQIASQLLLLRAEREGEMSSEQIKKEIVKVSLHTPTLELETPHWHELPEIFRQFVS 128
Query: 126 RSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
S +L+ RI + + + N V QI+LL+ F
Sbjct: 129 HSLRLEARIQYM-RAGWETAASCALEDDNPVGKQIELLKTAFG 170
>gi|306841424|ref|ZP_07474126.1| protein of unknown function DUF1465 [Brucella sp. BO2]
gi|306288530|gb|EFM59882.1| protein of unknown function DUF1465 [Brucella sp. BO2]
Length = 143
Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats.
Identities = 61/141 (43%), Positives = 81/141 (57%), Gaps = 1/141 (0%)
Query: 29 IALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQRALEDGNMT 88
+ +VEE + Y D EG ++ L R + LY +ES+ LTTRLMQ+ SWL LQRA G MT
Sbjct: 1 MDMVEEAASYLDGEGREEARNLSRVAATLYAAESMRLTTRLMQIASWLLLQRAARSGEMT 60
Query: 89 LEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQEIYRADFD- 147
QV +EK K++ D PGW ELP F +LVERS +LQ R+ +D+E+Y
Sbjct: 61 RPQVSAEKAKVRLDTPSAGEAAPGWNELPLAFVDLVERSMRLQARVRRMDREVYGEVVAL 120
Query: 148 EISRGPNHVQTQIKLLEACFE 168
+ N V QI LL+ F
Sbjct: 121 QRVPRGNPVSEQIVLLKTAFG 141
>gi|49474679|ref|YP_032721.1| hypothetical protein BQ11900 [Bartonella quintana str. Toulouse]
gi|49240183|emb|CAF26649.1| hypothetical protein BQ11900 [Bartonella quintana str. Toulouse]
Length = 172
Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats.
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 6 SGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLL 65
I + F LY+E++AL+EET+ Y D EG + ++ L +S LY E++ L
Sbjct: 9 DKPIIMIEHNAFDSVFNRLYEETMALIEETAAYIDTEGRIAARFLSAEVSALYAKEAMYL 68
Query: 66 TTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVE 125
+TRLMQ+ S L L RA +G M+ EQ+ E K+ L W E P F++ V
Sbjct: 69 STRLMQIASQLLLLRAEREGEMSPEQIQKEIAKVSLHTPTLKLESVHWQEFPEIFRHFVA 128
Query: 126 RSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
RS +L+ R+ + + + + N V TQI+LL+ F+
Sbjct: 129 RSLRLEARMQYM-RYGRESISSNVLEDDNPVGTQIELLKTAFQ 170
>gi|319409327|emb|CBI82971.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 172
Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats.
Identities = 57/163 (34%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Query: 6 SGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLL 65
+I + F LY+E++ L+EET+ Y D+EG ++ LP S LY E++ L
Sbjct: 9 DKTIIMMEHDAFESVFNRLYEETMDLIEETADYIDKEGKCAARHLPVETSALYAKEAMYL 68
Query: 66 TTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVE 125
+TRLMQ+ S L L RA +G M+ +Q+ E KI L WTELP F++ V
Sbjct: 69 STRLMQIASRLLLFRAGREGEMSPKQIQKEIAKISLHTPSLGPQAAHWTELPEIFRHFVA 128
Query: 126 RSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
RS +L+ R+ + +I +A + + N V QI+LL+ F
Sbjct: 129 RSLRLEERMRHVSYDIDQASCKTLKKN-NPVTKQIQLLKRAFR 170
>gi|218506779|ref|ZP_03504657.1| hypothetical protein RetlB5_03794 [Rhizobium etli Brasil 5]
Length = 125
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 62/124 (50%), Positives = 83/124 (66%)
Query: 7 GSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLT 66
+IS R S + K LY E ++LVEET+ Y D +G SK LPR S LY +ES+ LT
Sbjct: 2 NTISFAGRAAASSQFKALYAEGMSLVEETAAYLDGQGRAASKILPRMASVLYAAESMRLT 61
Query: 67 TRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVER 126
TRLMQM SWL LQRA+ +G M+ +QV++EK K++ D +D PGW +LP F++LVER
Sbjct: 62 TRLMQMASWLLLQRAVNNGEMSRDQVLAEKNKVRLDGFNVDRAAPGWGDLPESFRDLVER 121
Query: 127 SSQL 130
S +L
Sbjct: 122 SLRL 125
>gi|329849655|ref|ZP_08264501.1| hypothetical protein ABI_25500 [Asticcacaulis biprosthecum C19]
gi|328841566|gb|EGF91136.1| hypothetical protein ABI_25500 [Asticcacaulis biprosthecum C19]
Length = 171
Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats.
Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 8/172 (4%)
Query: 1 MSNRVSGSISCLNR----RLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISK 56
MS + +++ S +KE +ALVEET+ Y D +G S+ L R +
Sbjct: 1 MSESTAPTLNLRLHVVRDFASSDLFDRTFKEGMALVEETAAYLDGDGRRDSRLLSREDAL 60
Query: 57 LYTSESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL 116
+Y ES+ LTTRLMQ+ SWL +QRA+ +G+M +K +I + + L
Sbjct: 61 VYAGESMRLTTRLMQIASWLLVQRAVREGDMEASDACDDKYRIAPLAADAFAAQ---QAL 117
Query: 117 PCFFKNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
P +L++RS++L RI +D+ ++ + N V +Q + L++ F
Sbjct: 118 PSGLLHLLDRSNRLYDRISHMDKRMFVDAEAQEVVV-NPVISQFQRLQSAFG 168
>gi|49476149|ref|YP_034190.1| hypothetical protein BH14920 [Bartonella henselae str. Houston-1]
gi|49238957|emb|CAF28255.1| hypothetical protein BH14920 [Bartonella henselae str. Houston-1]
Length = 172
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 55/163 (33%), Positives = 82/163 (50%), Gaps = 1/163 (0%)
Query: 6 SGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLL 65
I + F LY+E++AL+E+T+ Y D EG L +++L +S LY E++ L
Sbjct: 9 DEPIIMVEHNAFDNAFNRLYEETMALIEQTATYIDTEGKLAARSLSAEVSALYAKEAMYL 68
Query: 66 TTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVE 125
+TRLMQ+ S L L RA +G M+ EQ+ E K+ L W E P F+N V
Sbjct: 69 STRLMQIASQLLLLRAEREGEMSPEQIQKELAKVSLHTPTLKLESAHWQEFPEVFRNFVA 128
Query: 126 RSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
RS +L+ R+ L + + N V QI+LL+ F
Sbjct: 129 RSLRLEARMQYL-RTGREGISSPVLEDENPVGKQIELLKTAFR 170
>gi|319404767|emb|CBI78368.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 173
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 93/164 (56%), Gaps = 1/164 (0%)
Query: 7 GSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLT 66
+I + F LY+E++AL+EET+ Y D EG L+++ L +S++Y E++ L+
Sbjct: 11 QAIVMIEHNAFENVFNRLYEETMALIEETATYIDTEGRLIARDLSVELSEIYGKEAMYLS 70
Query: 67 TRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVER 126
TRLMQ+ S L L RA +G M+ EQ+ E K+ L+S W ELP F++ V+R
Sbjct: 71 TRLMQIASQLLLIRAEREGEMSPEQIQKEIAKVSLSTPSLESKSAHWKELPEVFRHFVKR 130
Query: 127 SSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFENF 170
S +L++R+ ++ + +S+ N V Q++LL+ F+
Sbjct: 131 SLRLEKRMQHMNYDKKHTSLQTVSQN-NPVNKQLQLLKTAFQRL 173
>gi|319407731|emb|CBI81379.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 173
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 93/164 (56%), Gaps = 1/164 (0%)
Query: 7 GSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLT 66
+I + F LY+E++AL+EET+ Y D EG L+++ L +S++Y E++ L+
Sbjct: 11 QAIVMIEHNAFENVFNRLYEETMALIEETATYIDTEGRLVARDLSIELSEIYGKEAMYLS 70
Query: 67 TRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVER 126
TRLMQ+ S L L RA +G M+ EQ+ E K+ L+S W ELP F++ V+R
Sbjct: 71 TRLMQIASQLLLIRAEREGEMSPEQIQKEIAKVSLSTPSLESKSAHWKELPEVFRHFVKR 130
Query: 127 SSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFENF 170
S +L++R+ ++ + +S+ N V Q++LL+ F+
Sbjct: 131 SLRLEKRMQHMNYDKKHTSLQTVSQN-NPVNKQLQLLKTAFQRL 173
>gi|319406254|emb|CBI79891.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 173
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 53/164 (32%), Positives = 88/164 (53%), Gaps = 1/164 (0%)
Query: 7 GSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLT 66
+I + F LY+E++ L+EET+ Y D EG L++ L +S++Y E++ L+
Sbjct: 11 QAIVMIEHNAFDNVFNRLYEETMILIEETANYIDTEGRLVAHDLSVELSEIYGKEAMYLS 70
Query: 67 TRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVER 126
TRLMQ+ S L L RA +G M+ EQ+ E K+ L+S W ELP F++ V+R
Sbjct: 71 TRLMQIASQLLLIRAEREGEMSPEQIQKEIAKVSLHTPSLESKSAHWKELPEVFRHFVQR 130
Query: 127 SSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFENF 170
S +L++R+ + + + N V Q++LL+ F+
Sbjct: 131 SLRLEKRMRHM-NYDKKHTALQALSQNNPVNKQLQLLKTAFQRL 173
>gi|114798262|ref|YP_758747.1| hypothetical protein HNE_0013 [Hyphomonas neptunium ATCC 15444]
gi|114738436|gb|ABI76561.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 180
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 58/166 (34%), Positives = 80/166 (48%), Gaps = 2/166 (1%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
M+ R S L ++ +ALVEET+ Y D G SKTL R S Y +
Sbjct: 1 MAERDLVSPQSLEPFTGGKLFDTVFTRGMALVEETAAYLDGPGREQSKTLAREASLTYAA 60
Query: 61 ESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF 120
S+ LTTRLMQ SWL +Q+A+ DG+M E S K +I+ D LD + LP F
Sbjct: 61 WSMELTTRLMQAASWLVMQKAVRDGDMRREDAGSRKYRIRRDEPALDPSKQEGRGLPPRF 120
Query: 121 KNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEAC 166
LV R+ L ++ LD+ +Y+ PN V Q+ L+
Sbjct: 121 LELVGRAEALFEQVCRLDEALYQP--ASAVSAPNPVSEQMAALQKA 164
>gi|302382527|ref|YP_003818350.1| hypothetical protein Bresu_1415 [Brevundimonas subvibrioides ATCC
15264]
gi|302193155|gb|ADL00727.1| protein of unknown function DUF1465 [Brevundimonas subvibrioides
ATCC 15264]
Length = 175
Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 51/154 (33%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 15 RLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVS 74
S + ++E + LVEET+ Y D +G SK L R+ + Y ES+ LTTRLMQ+ S
Sbjct: 26 FARSELFERTFQEGMDLVEETAAYLDGDGRRESKLLSRSAALAYAGESMKLTTRLMQIAS 85
Query: 75 WLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRI 134
WL +QRA+ + +MT E + ++ D T P E+P + R+ +L R+
Sbjct: 86 WLLVQRAVREDDMTPEAACDARYRLNERKVETDPTHP---EIPIALVEYLVRAEKLHDRV 142
Query: 135 VLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
+ LD+ +Y N V +Q+ +LEA F
Sbjct: 143 LYLDRRMYLD--TPAESDTNPVLSQMGMLEAAFR 174
>gi|319899373|ref|YP_004159470.1| hypothetical protein BARCL_1228 [Bartonella clarridgeiae 73]
gi|319403341|emb|CBI76900.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 171
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 2/164 (1%)
Query: 7 GSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLT 66
I + F LY+E++ L+EET+ Y D EG L ++ L +S++Y E++ L+
Sbjct: 10 QPIVMIEHDAFETVFDRLYEETMVLIEETAAYIDTEGRLAARDLSIELSEIYGKEAMYLS 69
Query: 67 TRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVER 126
TRLMQ+ S L L RA +G M+ EQ+ E K+ L+S W ELP F++ V+R
Sbjct: 70 TRLMQIASQLLLIRAEREGEMSPEQIQKEIAKVSLYTPSLESKSAEWKELPEVFRHFVKR 129
Query: 127 SSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFENF 170
S +L++R+ ++ + A N V QI+LL+ F+
Sbjct: 130 SLRLEKRMRHMNYDKKHALHT--LSKNNPVNKQIQLLKTAFQRL 171
>gi|182680152|ref|YP_001834298.1| hypothetical protein Bind_3249 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636035|gb|ACB96809.1| protein of unknown function DUF1465 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 181
Score = 160 bits (404), Expect = 8e-38, Method: Composition-based stats.
Identities = 59/166 (35%), Positives = 90/166 (54%), Gaps = 2/166 (1%)
Query: 3 NRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSES 62
V+ IS + + S + K L++E + LV E + Y D EG SK L RA + Y+ ES
Sbjct: 7 QAVAQPISFGAKLMSSAQFKSLFQEGMDLVAEAAAYLDGEGRDDSKRLNRAGALAYSVES 66
Query: 63 VLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKN 122
+ LTTRL+Q+ SWL LQRA+ +G +T E+ S+K KI+ + + LP
Sbjct: 67 MRLTTRLLQLASWLLLQRAVNEGELTAEEASSDKHKIQLTPQDAATNEDQYRSLPLRLCE 126
Query: 123 LVERSSQLQRRIVLLDQEIYRADFDEISRGP--NHVQTQIKLLEAC 166
L++ S +LQ R++ LD I+R + R P N V + +L+A
Sbjct: 127 LIDHSVRLQTRVLHLDDLIHRPETQAQWRAPGLNPVAESLAVLQAA 172
>gi|254420164|ref|ZP_05033888.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
gi|196186341|gb|EDX81317.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
Length = 176
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 54/154 (35%), Positives = 80/154 (51%), Gaps = 5/154 (3%)
Query: 15 RLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVS 74
S ++E + LVEET+ Y D EG SK L RA + Y +ES+ LTTRLMQ+ S
Sbjct: 27 FARSELFDRTFREGMELVEETAAYLDGEGRRDSKMLSRAAALAYAAESMKLTTRLMQIAS 86
Query: 75 WLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRI 134
WL +QRA+ + +MT + + ++ + P ELP + RS +L R
Sbjct: 87 WLLVQRAVREDDMTPDAACEPRYRLNDRKI---ESEPSHAELPIALVEYLVRSEKLFDRA 143
Query: 135 VLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
+ LD+ +Y +E + N V +Q LLEA F+
Sbjct: 144 LYLDRRMYLDVQEEQPQ--NPVLSQHGLLEAAFK 175
>gi|304319986|ref|YP_003853629.1| hypothetical protein PB2503_02047 [Parvularcula bermudensis
HTCC2503]
gi|303298889|gb|ADM08488.1| hypothetical protein PB2503_02047 [Parvularcula bermudensis
HTCC2503]
Length = 180
Score = 157 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Query: 15 RLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVS 74
+ S L+ + + LVEET+ Y D G ++ L R Y S+ LTTRLMQ+ S
Sbjct: 22 FVRSKVFTNLFAQGMELVEETAGYLDNTGRAAARELSREAQMTYAGVSMRLTTRLMQIAS 81
Query: 75 WLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRI 134
WL + RA+ DG M+ ++ EK ++ G S LP L+ + L RI
Sbjct: 82 WLLVLRAVRDGEMSEDEAADEKYRVGPAEPGGKSATD-VDVLPEELLELIAETDTLYTRI 140
Query: 135 VLLDQEIYRADFDEISRGPNHVQTQIKLLEACFEN 169
LD +++ D QT++ L+ F +
Sbjct: 141 RRLDHDLF-DDAAGRDSHAGDAQTRLAALQQAFGD 174
>gi|304393280|ref|ZP_07375208.1| AraC family transcriptional regulator [Ahrensia sp. R2A130]
gi|303294287|gb|EFL88659.1| AraC family transcriptional regulator [Ahrensia sp. R2A130]
Length = 172
Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 3/168 (1%)
Query: 2 SNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSE 61
+N S S + L L++ +ALVEETS Y D EG ++ LPR ++ Y S+
Sbjct: 5 TNTEQESSSVITLALPERDFDRLFERGMALVEETSLYLDGEGRETARDLPRELAGQYGSQ 64
Query: 62 SVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFK 121
++ LTTRLM+M SWL + R+ + + Q M EK ++ D P + LP +
Sbjct: 65 AMALTTRLMRMASWLLIHRSWTEDEIDDTQAMREKATLRLDKLPAPRNSPSFNTLPLGLR 124
Query: 122 NLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFEN 169
L++RS +Q+ ++ N V Q L + F N
Sbjct: 125 ELIDRSIGIQQSLMAFSNAGN---PAPPIIRENAVAAQQSFLRSAFWN 169
>gi|329890357|ref|ZP_08268700.1| hypothetical protein BDIM_20580 [Brevundimonas diminuta ATCC 11568]
gi|328845658|gb|EGF95222.1| hypothetical protein BDIM_20580 [Brevundimonas diminuta ATCC 11568]
Length = 151
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 6/154 (3%)
Query: 15 RLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVS 74
S + ++E + LVEET+ Y D +G S+ L RA + Y ES+ LTTRLMQ+ S
Sbjct: 4 FARSELFERTFREGMELVEETAAYLDGDGRQDSRLLSRAAALSYAGESMKLTTRLMQIAS 63
Query: 75 WLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRI 134
WL +QRA+ + +M+ E + ++ T P +LP R+ +L R+
Sbjct: 64 WLLVQRAVREQDMSAEAAGDPRYRLADRRI---ETEPRRGDLPIALIEYAVRAEKLYDRV 120
Query: 135 VLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
+ LD+++Y + N V Q+ LL A F
Sbjct: 121 LHLDRQMY---VEPAEAPANPVLNQMDLLRAAFG 151
>gi|298293015|ref|YP_003694954.1| hypothetical protein Snov_3060 [Starkeya novella DSM 506]
gi|296929526|gb|ADH90335.1| protein of unknown function DUF1465 [Starkeya novella DSM 506]
Length = 168
Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats.
Identities = 64/166 (38%), Positives = 92/166 (55%), Gaps = 3/166 (1%)
Query: 3 NRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSES 62
+ V+ +IS RRL S L+++ +AL++ET+ Y D EG S+ L R + Y +S
Sbjct: 4 DGVAETISLAARRLASPAFTSLFRQGMALIDETAAYLDGEGRTASRGLARGVLAAYAQQS 63
Query: 63 VLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKN 122
+ L+TRLMQ+ SWL L+RA+ +G+M+ E + E +I D D ELP
Sbjct: 64 LQLSTRLMQLASWLLLRRAVLEGDMSEESALRESARIDLDGPRRDLDQE--AELPAQLAA 121
Query: 123 LVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
LV RS +LQR+IV LD + RA + PN V QI L + FE
Sbjct: 122 LVRRSHELQRQIVKLDAAL-RAPAETAGLRPNDVAGQIGKLRSAFE 166
>gi|197106666|ref|YP_002132043.1| hypothetical protein PHZ_c3205 [Phenylobacterium zucineum HLK1]
gi|196480086|gb|ACG79614.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 169
Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 15 RLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVS 74
S + ++E + LVEET+ Y D G SK L R + Y SES+ LTTRLMQ+ S
Sbjct: 19 FARSELFERTFQEGMELVEETAAYLDGAGRQESKLLSRNAALAYASESMRLTTRLMQVAS 78
Query: 75 WLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRI 134
WL +QRA+ +G+M ++ ++ +Y+ +LP L++R+ +L R+
Sbjct: 79 WLLVQRAVREGDMPPAAACEDRYRLSEEYA--REHEEAIEDLPSPLLLLLDRAERLYERV 136
Query: 135 VLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
LD+ +Y N V + + L+ F
Sbjct: 137 RHLDRRMYVEGATAQPH--NPVLSHLDRLKTAFG 168
>gi|94497473|ref|ZP_01304043.1| hypothetical protein SKA58_07960 [Sphingomonas sp. SKA58]
gi|94423104|gb|EAT08135.1| hypothetical protein SKA58_07960 [Sphingomonas sp. SKA58]
Length = 145
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 20 RLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQ 79
+ LY E++ + +E YFD + +T+ + ES+ +TTRLM +++WL Q
Sbjct: 1 MVDGLYLEAMMMADEARAYFDGDPLGRGETVDPLRRVSFACESLKVTTRLMHVIAWLLSQ 60
Query: 80 RALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQ 139
RA + G ++ ++ EK ++ + G+ P + L+E S L R+ L+
Sbjct: 61 RAWQRGEISDADLVDEKYRLGRASLTDPTLTEGF---PFEARALIEGSQDLYDRVARLED 117
Query: 140 EIYRADFDEISRGPNHVQTQIKLLEACF 167
I + D ++ + + L F
Sbjct: 118 RIGHMNDDPKAQDAGPARALLDRLNTAF 145
>gi|294011263|ref|YP_003544723.1| hypothetical protein SJA_C1-12770 [Sphingobium japonicum UT26S]
gi|292674593|dbj|BAI96111.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length = 156
Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 6/156 (3%)
Query: 12 LNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQ 71
L++ L + LY E++ + +E YFD + + ES+ +TTRLM
Sbjct: 7 LDQGLHRRLVDGLYVEAMVMADEARAYFDLRDGGDADVDDPVRRVAFACESLKVTTRLMH 66
Query: 72 MVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQ 131
+++WL QRA + G ++ +++ EK ++ + S V G+ P + L++ S L
Sbjct: 67 IIAWLLSQRAWQRGELSDAEMLDEKYRLGHAATTDPSVVGGF---PFAARALIDGSQDLY 123
Query: 132 RRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACF 167
R+ L + R PN + + L A F
Sbjct: 124 ERVARLQDRMARP---RAQAEPNPARALMDRLNAAF 156
>gi|288959165|ref|YP_003449506.1| hypothetical protein AZL_023240 [Azospirillum sp. B510]
gi|288911473|dbj|BAI72962.1| hypothetical protein AZL_023240 [Azospirillum sp. B510]
Length = 140
Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 61/130 (46%)
Query: 21 LKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQR 80
Y E++AL+ E Y + LP + + ES+ +T+RL Q+++WL Q+
Sbjct: 8 FNGPYDETMALLIEARNYIAYHDASEHRKLPPQVRLQISYESMRVTSRLTQVMAWLLAQK 67
Query: 81 ALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQE 140
A+ G MT EQ S+ + D + P ELP ++L+ERS L R+ LD
Sbjct: 68 AVHAGEMTKEQAASDDFALSGGEICSDPSGPDNEELPSGLRSLLERSHSLYMRVDRLDAM 127
Query: 141 IYRADFDEIS 150
+ E +
Sbjct: 128 VRADVEREAA 137
>gi|83312140|ref|YP_422404.1| hypothetical protein amb3041 [Magnetospirillum magneticum AMB-1]
gi|82946981|dbj|BAE51845.1| Uncharacterized protein conserved in bacteria [Magnetospirillum
magneticum AMB-1]
Length = 163
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Query: 11 CLNRRLFSMRL-KVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRL 69
+R+ + Y E++ L+ E Y + + I + E++ +T+RL
Sbjct: 26 FGEKRMPQPAFFRRTYDETMTLMVEARNYLAYAERRERQRVGGMIGLRMSCEAMRVTSRL 85
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQ 129
Q+++WL LQRA+ +G + + + ++ ++ LD + LP ++L+ERS +
Sbjct: 86 TQVMAWLMLQRAVHEGEVEAAEALRDEWRLSGAEVCLDESFGCDETLPNHLRSLMERSFR 145
Query: 130 LQRRIVLLDQEI 141
L R+ L++ +
Sbjct: 146 LYVRVARLEEML 157
>gi|209965133|ref|YP_002298048.1| hypothetical protein RC1_1839 [Rhodospirillum centenum SW]
gi|209958599|gb|ACI99235.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 133
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 61/123 (49%)
Query: 21 LKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQR 80
Y E++AL+ E Y LP + + E++ +TTRL Q+++WL Q+
Sbjct: 8 FNRTYDETMALLLEARNYVAHHEAADQAKLPPHLRLQASYEAMRVTTRLTQVMAWLLAQK 67
Query: 81 ALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQE 140
A+ G MT EQ S++ + + + + P LP ++L++RS L R+ LD+
Sbjct: 68 AVHAGEMTQEQAASDEYALSGGHICSEPSGPESELLPGGLRSLLDRSHGLYVRVARLDEM 127
Query: 141 IYR 143
+ R
Sbjct: 128 VRR 130
>gi|148553499|ref|YP_001261081.1| hypothetical protein Swit_0575 [Sphingomonas wittichii RW1]
gi|148498689|gb|ABQ66943.1| Uncharacterized protein [Sphingomonas wittichii RW1]
Length = 154
Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 15 RLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVS 74
RL + LY E++ L +E YF+ G + L + ES+ +T+RLM +++
Sbjct: 9 RLRGRLVNSLYTEAMLLADEARGYFEHRGRDDREALDPLARVTLSCESLKVTSRLMHVLA 68
Query: 75 WLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRI 134
WL +RA+E G M+ E+ + ++ + G LP L++ S L R+
Sbjct: 69 WLLTERAIELGQMSDEEAAAAARRLGDATPSDAISTAG---LPPAAIALIDASQDLYARV 125
Query: 135 VLLDQEIYRADFDEISRGPNHVQTQIKLLEACF 167
L+ E +++ + + + LE F
Sbjct: 126 RRLEVE----PPVDVAPAASPALSLLDRLEKAF 154
>gi|307294319|ref|ZP_07574163.1| protein of unknown function DUF1465 [Sphingobium chlorophenolicum
L-1]
gi|306880470|gb|EFN11687.1| protein of unknown function DUF1465 [Sphingobium chlorophenolicum
L-1]
Length = 131
Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 6/137 (4%)
Query: 31 LVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQRALEDGNMTLE 90
+ +E YFD ++ + ES+ +TTRLM +++WL QRA + G +
Sbjct: 1 MADEARAYFDMRERPDAEADDPLRRVAFACESLKVTTRLMHIIAWLLSQRAWQRGELADA 60
Query: 91 QVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQEIYRADFDEIS 150
+++ EK ++ + + + P + L++ S L R+ L + R
Sbjct: 61 EMLDEKYRLGHATTSDPALCATF---PFAARALIDGSQDLYERVARLQDRMARP---RAQ 114
Query: 151 RGPNHVQTQIKLLEACF 167
PN + + L A F
Sbjct: 115 AEPNPARALMDRLNAAF 131
>gi|144898129|emb|CAM74993.1| protein conserved in bacteria [Magnetospirillum gryphiswaldense
MSR-1]
Length = 137
Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 57/121 (47%)
Query: 21 LKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQR 80
Y E++ L+ E Y + + E++ +T+RL Q+++WL +QR
Sbjct: 7 FGRTYDEAMTLMVEARNYMAYVEQRERRKAEAMAGLRMSCEAMRVTSRLTQVMAWLMMQR 66
Query: 81 ALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQE 140
A+ G + + +SE ++ LD T LP ++L+ERS L +RI L+ +
Sbjct: 67 AVHAGEIEADDALSEPNRLSGLEVCLDQTFGRDEALPTGLRSLLERSLSLYQRIARLENQ 126
Query: 141 I 141
+
Sbjct: 127 M 127
>gi|163796349|ref|ZP_02190310.1| hypothetical protein BAL199_19311 [alpha proteobacterium BAL199]
gi|159178491|gb|EDP63033.1| hypothetical protein BAL199_19311 [alpha proteobacterium BAL199]
Length = 140
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 54/139 (38%), Gaps = 10/139 (7%)
Query: 20 RLKVLYKESIALVEETSCYFD---REGHLLSKTLPRA-------ISKLYTSESVLLTTRL 69
Y+E +AL+EE G L + + E+ +T+RL
Sbjct: 2 VFDGTYREVLALLEEARELAATRRGAGVPGGDGLSGENLCRSMVLRLEASCEAFRVTSRL 61
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQ 129
++W+ +QRA+ DG ++ + + + ++ L+ LP + L+ S +
Sbjct: 62 SHCLAWVMVQRAIHDGELSHDAALDPQNRLDGGPVCLEVGGEANPYLPQRLRALLAASRK 121
Query: 130 LQRRIVLLDQEIYRADFDE 148
L R+ LD + E
Sbjct: 122 LYARLARLDARVSSTAPAE 140
>gi|332185215|ref|ZP_08386964.1| hypothetical protein SUS17_78 [Sphingomonas sp. S17]
gi|332014939|gb|EGI56995.1| hypothetical protein SUS17_78 [Sphingomonas sp. S17]
Length = 153
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 58/150 (38%), Gaps = 8/150 (5%)
Query: 18 SMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLF 77
+ LY E + L E YFD G L ++ ES+ +TTRLM +++W+
Sbjct: 12 RKLIDGLYAEVMTLAETARGYFDGIGRQDRDALEPVARIGFSCESLKVTTRLMHVIAWIL 71
Query: 78 LQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLL 137
QRA++ G + + ++ ++ V L + S L RR+ L
Sbjct: 72 TQRAVDAGELPWSESRDPVRRLGRSPESDEAAVAALP---PRAAALTQASLDLHRRVERL 128
Query: 138 DQEIYRADFDEISRGPNHVQTQIKLLEACF 167
DQ DE + VQ L F
Sbjct: 129 DQM-----ADEPVAEVSPVQMLQARLGGAF 153
>gi|149186930|ref|ZP_01865239.1| probable transcriptional regulator, AraC family protein
[Erythrobacter sp. SD-21]
gi|148829439|gb|EDL47881.1| probable transcriptional regulator, AraC family protein
[Erythrobacter sp. SD-21]
Length = 152
Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 62/155 (40%), Gaps = 9/155 (5%)
Query: 13 NRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQM 72
+R + ++ LY E++AL +E FD P + + E + TTR+M +
Sbjct: 4 DRTIHEQVVEDLYAEALALADEARAVFDLRDEASHDNTPDEVRIALSIEGLRTTTRVMHV 63
Query: 73 VSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQR 132
++WL QRA G +T Q++ + S +L + L+ + +L
Sbjct: 64 LAWLLNQRAYHAGELTKLQLL----RHGTLGEERPSDPANMEKLELATRALIRDTERLHA 119
Query: 133 RIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACF 167
R+ LD+E +I + V + F
Sbjct: 120 RVARLDEE-----QRQIESAKDPVSDMQGRIAQAF 149
>gi|85707579|ref|ZP_01038645.1| probable transcriptional regulator, AraC family protein
[Erythrobacter sp. NAP1]
gi|85689113|gb|EAQ29116.1| probable transcriptional regulator, AraC family protein
[Erythrobacter sp. NAP1]
Length = 153
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 54/155 (34%), Gaps = 9/155 (5%)
Query: 16 LFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSW 75
L ++ LY E++ L +E F I ++E + TTR+M +++W
Sbjct: 7 LSRPIIEALYSEALLLADEVRAVFALGTREPENGEASDIRLALSTEGLKTTTRMMHVLAW 66
Query: 76 LFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIV 135
L QRA G ++ QV S + L L+ + +L RI
Sbjct: 67 LLNQRAFFSGELSETQVRLH----GTLPSDRGADPKALEVLEPETCALIAETERLHERIA 122
Query: 136 LLDQEIYRADFDEISRGPNHVQTQIKLLEACFENF 170
LD+ + + L+ E+
Sbjct: 123 RLDEAWRCGF-----EMASPARAIHSRLKRRIEDL 152
>gi|85372924|ref|YP_456986.1| AraC family transcriptional regulator [Erythrobacter litoralis
HTCC2594]
gi|84786007|gb|ABC62189.1| probable transcriptional regulator, AraC family protein
[Erythrobacter litoralis HTCC2594]
Length = 156
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 57/156 (36%), Gaps = 11/156 (7%)
Query: 16 LFSMRLKVLYKESIALVEETSCYFD-REGHLLSKTLPRAISKLYTSESVLLTTRLMQMVS 74
L + ++ LY E++ L ++ FD + I+ +SE + TTR+M ++
Sbjct: 7 LSATIVEELYCEALVLADDVRAAFDLSTPRECNSHDTLRIAL--SSEGLKTTTRVMHTLA 64
Query: 75 WLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRI 134
WL +RA G M+ Q+ + +L + L+ + + R+
Sbjct: 65 WLLNRRAFFRGEMSEYQLQ----RHGKLPPDRAPDPVMLDQLELPTQLLIAETRTMHARV 120
Query: 135 VLLDQEIYRADFDEISRGPNHVQTQIKLLEACFENF 170
LD RA + + + + L
Sbjct: 121 ARLD----RAWRERFEFPASPIDELQERLTRAIRQM 152
>gi|296282858|ref|ZP_06860856.1| AraC family transcriptional regulator [Citromicrobium bathyomarinum
JL354]
Length = 152
Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 52/143 (36%), Gaps = 6/143 (4%)
Query: 20 RLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQ 79
++ LY E+ L +E F + + + E + TTR+M +++WL
Sbjct: 11 IIEELYCEANVLADEVRTAF-VPAATELMPIDLPLRRALECEGLKATTRIMHVLAWLLNH 69
Query: 80 RALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQ 139
RA G M+ Q + + L + LV ++ +L R+ +D
Sbjct: 70 RAFLAGQMSDLQWE----RHTQLPPDRAPSAELMDMLDLSTRALVAQTQRLHARVARIDA 125
Query: 140 EIYRADFDEISRGPNHVQTQIKL 162
E YR + +++
Sbjct: 126 E-YRMARSNSQPSCGQLHERLER 147
>gi|87198109|ref|YP_495366.1| hypothetical protein Saro_0083 [Novosphingobium aromaticivorans DSM
12444]
gi|87133790|gb|ABD24532.1| hypothetical protein Saro_0083 [Novosphingobium aromaticivorans DSM
12444]
Length = 179
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 11/155 (7%)
Query: 16 LFSMRLKVLYKESIALVEETSCYFDREGHLL----SKTLPRAISKLYTSESVLLTTRLMQ 71
L + L+ +++ L + F+ + E++ TTR+M
Sbjct: 19 LNPRIVDALHAQALGLADAVRTRFEALRREALDAAGSDCEDLHRVRVSCEALRTTTRVMH 78
Query: 72 MVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQ 131
++WL RA G ++ Q+ + + S LP + LV S +L
Sbjct: 79 CLAWLLNHRAYFAGELSQLQLRRHG---RLITNFPASEPEVVASLPDDARTLVHESERLY 135
Query: 132 RRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEAC 166
RI L+ A + + + + + L
Sbjct: 136 ERIQRLEN----AWRTQGASSESAIDALRQRLVRA 166
>gi|103486220|ref|YP_615781.1| hypothetical protein Sala_0727 [Sphingopyxis alaskensis RB2256]
gi|98976297|gb|ABF52448.1| conserved hypothetical protein [Sphingopyxis alaskensis RB2256]
Length = 146
Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 56/155 (36%), Gaps = 16/155 (10%)
Query: 16 LFSMRLKVLYKESIALVEETSCYFD-----REGHLLSKTLPRAISKLYTSESVLLTTRLM 70
+ +++ LY E++ L +E F G ++ ES+ TTRLM
Sbjct: 1 MQRAQVENLYVEAMLLADEAHAAFAAQRDLGLGEDGARKGDALAQISLACESLKTTTRLM 60
Query: 71 QMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQL 130
+++WL +RA+ G+ +I + + + ++ S +L
Sbjct: 61 HIIAWLLHRRAMLAGD-PGAGPGDSAARIGEPVVADWAVCASFD---ASLRRIIGASERL 116
Query: 131 QRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEA 165
RI L++ VQ + LEA
Sbjct: 117 FERIALIEAGWNAP-------AATPVQQLLARLEA 144
>gi|46202243|ref|ZP_00053513.2| hypothetical protein Magn03008094 [Magnetospirillum
magnetotacticum MS-1]
Length = 88
Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 21 LKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQR 80
+ Y E++ L+ E Y L I + E++ +T+RL Q+++WL LQR
Sbjct: 7 FRRTYDETMTLMVEARNYLTYSERRERDRLGGMIGLRMSCEAMRVTSRLTQVMAWLMLQR 66
Query: 81 ALEDGNMTLEQVMS 94
A+++G + +E +
Sbjct: 67 AVQEGEIEVEDACA 80
>gi|158422116|ref|YP_001523408.1| hypothetical protein AZC_0492 [Azorhizobium caulinodans ORS 571]
gi|158329005|dbj|BAF86490.1| protein of unknown function [Azorhizobium caulinodans ORS 571]
Length = 280
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 5/140 (3%)
Query: 18 SMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLF 77
S LY + + L S Y G S+ LP A Y E+ LTT L+Q+ +WL
Sbjct: 124 SGPFAALYSDGLDLAARLSAYLSGPGRTYSEELPLASRLAYHDEARELTTLLLQLAAWLL 183
Query: 78 LQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRR-IVL 136
++RA+ +G MT + E E ++ + LP K L + L+ R +
Sbjct: 184 MERAVAEGEMTFDHAYHEAETLEL----RPRRSAVGSGLPDGLKALRAEAELLRLRVVAR 239
Query: 137 LDQEIYRADFDEISRGPNHV 156
+ + R + +
Sbjct: 240 AEHILERGERPPEHQSAVPA 259
>gi|326386196|ref|ZP_08207820.1| hypothetical protein Y88_2088 [Novosphingobium nitrogenifigens DSM
19370]
gi|326209421|gb|EGD60214.1| hypothetical protein Y88_2088 [Novosphingobium nitrogenifigens DSM
19370]
Length = 164
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 52/150 (34%), Gaps = 15/150 (10%)
Query: 16 LFSMRLKVLYKESIALVEETSCYF------DREGHLLS--KTLPRAI----SKLYTSESV 63
L ++ LY E++ L E T F L + P S E++
Sbjct: 4 LSQRLVESLYGEALVLAENTRTRFEQVREDASPERLQAVSSGQPPRAHGVDSVEIMCEAL 63
Query: 64 LLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNL 123
TTR+M ++WL R+ G ++ Q+ + S LP
Sbjct: 64 RTTTRVMHCLAWLLNYRSWFAGELSAVQLRCHG---RLITHFPASDPSIVARLPDDLAGF 120
Query: 124 VERSSQLQRRIVLLDQEIYRADFDEISRGP 153
V +S +L RI L+ + + + +
Sbjct: 121 VRQSERLYERIQRLELALRQDLTEAVGAIA 150
>gi|186475734|ref|YP_001857204.1| poly(R)-hydroxyalkanoic acid synthase, class I [Burkholderia
phymatum STM815]
gi|184192193|gb|ACC70158.1| poly(R)-hydroxyalkanoic acid synthase, class I [Burkholderia
phymatum STM815]
Length = 662
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 57/151 (37%), Gaps = 15/151 (9%)
Query: 26 KESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSW-LFLQRALED 84
+E++ L+++ + + + ++SE+ T +W L R L++
Sbjct: 147 REAMQLLQQAA-------QATASGIELKDR-RFSSEAWKTTPIYTHTAAWYLLNARYLQE 198
Query: 85 --GNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL-PCFFKNLVERS-SQLQRRIVLLDQE 140
+ +Q E+ + ++ + L P K L+E + L++ ++ L +
Sbjct: 199 LVDAIETDQKTRERIRFAVQQWTAAASPSNFFALNPEAQKTLLESNGESLRQGVMNLLSD 258
Query: 141 IYRADFDEISRGPNHVQTQIKLLEAC--FEN 169
+ R + V + + E FEN
Sbjct: 259 MQRGKISQTDESRFGVGKNLAMTEGSVVFEN 289
>gi|121713540|ref|XP_001274381.1| C6 transcription factor, putative [Aspergillus clavatus NRRL 1]
gi|119402534|gb|EAW12955.1| C6 transcription factor, putative [Aspergillus clavatus NRRL 1]
Length = 267
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 28/83 (33%), Gaps = 6/83 (7%)
Query: 82 LEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQEI 141
+ +G+ Q + + + + S + LQ R+ L++++
Sbjct: 142 VPEGHTPPPQAVDPQTQSRPPAPTSQSQPQDQNQYQNKII------QDLQNRVRRLEEQL 195
Query: 142 YRADFDEISRGPNHVQTQIKLLE 164
+ GPN +Q + L
Sbjct: 196 PGPPLSRGTTGPNPSVSQTQALR 218
>gi|187477698|ref|YP_785722.1| malic enzyme [Bordetella avium 197N]
gi|115422284|emb|CAJ48808.1| NADP-dependent malic enzyme [Bordetella avium 197N]
Length = 760
Score = 38.0 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 35/93 (37%), Gaps = 7/93 (7%)
Query: 32 VEETSCYFDREGHLLSKT--LPRAISKLYTSESVLLT--TRLMQMVSWLFLQRALE---D 84
EE + + G + + +P+ +++ T +R M + L +RA D
Sbjct: 605 AEEVANITIQAGEEMMRFGVVPKIALLSHSNFGSRPTESSRKMALARRLVAERAPHLEVD 664
Query: 85 GNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELP 117
G M + +SEK +++ +P
Sbjct: 665 GEMHADAALSEKIRVQAYPDSSLKGPANLLVMP 697
>gi|258422532|ref|ZP_05685440.1| large surface anchored protein [Staphylococcus aureus A9635]
gi|257847289|gb|EEV71295.1| large surface anchored protein [Staphylococcus aureus A9635]
Length = 7732
Score = 37.6 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 12/90 (13%)
Query: 79 QRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLD 138
QR +++G+ T +Q+ EK ++ T L +NL + +L++ + L+
Sbjct: 2649 QRVIDNGDATAQQISDEKHRVD----------NALTALNQAKQNLTADTHELEQAVQQLN 2698
Query: 139 QEIYRADFDEISRGP--NHVQTQIKLLEAC 166
+ S N + L +
Sbjct: 2699 RTGTTTGKKPASIAAYNNSIHALQSDLTSA 2728
>gi|51892524|ref|YP_075215.1| putative cell division control protein [Symbiobacterium
thermophilum IAM 14863]
gi|51856213|dbj|BAD40371.1| putative cell division control protein [Symbiobacterium
thermophilum IAM 14863]
Length = 562
Score = 37.6 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 27/70 (38%), Gaps = 8/70 (11%)
Query: 74 SWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLD-------STVPGWTELPCFFKNLVER 126
+W + A +T E + E+I+ + ++ LP F++L++
Sbjct: 487 AWELAEDAGRA-EITREDIEGALERIRPSTAQVEFMTDLAILECDDKDVLPPEFRDLLDD 545
Query: 127 SSQLQRRIVL 136
L+ R+
Sbjct: 546 RRALEERVQR 555
>gi|72162086|ref|YP_289743.1| hypothetical protein Tfu_1685 [Thermobifida fusca YX]
gi|71915818|gb|AAZ55720.1| CBS [Thermobifida fusca YX]
Length = 462
Score = 37.6 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 42/125 (33%), Gaps = 15/125 (12%)
Query: 47 SKTLPRAISKLYTSESVLLTTRLMQMVSWL------FLQRALEDGNMTLEQVMSEKEKIK 100
++ P A ++ S+ L RL + WL L +A+ +T + + +
Sbjct: 137 ARPEPVARRLALST-SIYL--RLFGWLIWLFDRASMLLLKAVR---ITPVEDVQHAATPR 190
Query: 101 FDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQI 160
++ + LP L++RS R + + + V +
Sbjct: 191 DLERIVEESRDSGD-LPAELSTLLDRSLDFHERTA--EHAMIPRPQVTFVEADDPVSRVV 247
Query: 161 KLLEA 165
+L+
Sbjct: 248 ELITT 252
>gi|154246419|ref|YP_001417377.1| pyridoxamine 5'-phosphate oxidase [Xanthobacter autotrophicus Py2]
gi|259530326|sp|A7II77|PDXH_XANP2 RecName: Full=Pyridoxine/pyridoxamine 5'-phosphate oxidase;
AltName: Full=PNP/PMP oxidase; Short=PNPOx; AltName:
Full=Pyridoxal 5'-phosphate synthase
gi|154160504|gb|ABS67720.1| pyridoxamine 5'-phosphate oxidase [Xanthobacter autotrophicus Py2]
Length = 213
Score = 37.2 bits (85), Expect = 0.76, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Query: 68 RLMQMVSWLFLQRALEDGNMTLEQVMSEK-EKIKFDYSGLDSTVPGWTELPCFFKNLVER 126
RL Q+ +W Q +G LE ++ K G+ LP + +R
Sbjct: 128 RLSQIGAWASSQSRPLEGRFALEAAVASATAKYALGTVPRPPHWTGFRVLPVAIEFWHDR 187
Query: 127 SSQLQRRI 134
+L R+
Sbjct: 188 PFRLHDRV 195
>gi|119466985|ref|XP_001257299.1| C6 transcription factor, putative [Neosartorya fischeri NRRL 181]
gi|119405451|gb|EAW15402.1| C6 transcription factor, putative [Neosartorya fischeri NRRL 181]
Length = 797
Score = 37.2 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 32/83 (38%), Gaps = 6/83 (7%)
Query: 82 LEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQEI 141
+ +G+ Q + + K + S ++N + LQ R+ L++++
Sbjct: 77 VPEGHTPPPQAIDLQTKSRPPAPISQSQPQDQN----QYQNTII--QDLQNRVRRLEEQL 130
Query: 142 YRADFDEISRGPNHVQTQIKLLE 164
+ + GPN +Q + L
Sbjct: 131 PCPPLSQGTTGPNPSVSQTQALR 153
>gi|268318091|ref|YP_003291810.1| gamma-glutamyltransferase [Rhodothermus marinus DSM 4252]
gi|262335625|gb|ACY49422.1| gamma-glutamyltransferase [Rhodothermus marinus DSM 4252]
Length = 593
Score = 37.2 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%)
Query: 87 MTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQEIYRADF 146
++ E +++E +++ G T+P W LP V+ +L R L A
Sbjct: 125 LSFETMVAEARRLQPPEPGEPPTIPLWGVLPVTVPGAVDGWFELHARFGRLPMREVLAPA 184
Query: 147 DEISRGPNHVQTQIK 161
+R V I
Sbjct: 185 IRYAREGFPVSQVIA 199
>gi|327272074|ref|XP_003220811.1| PREDICTED: LOW QUALITY PROTEIN: pleckstrin homology
domain-containing family A member 5-like [Anolis
carolinensis]
Length = 1169
Score = 36.9 bits (84), Expect = 0.89, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 21/142 (14%)
Query: 36 SCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQ-RALEDGNMTLEQVMS 94
+ Y D H LS+ R Y SE + + T+L S L Q + ++ L+Q+
Sbjct: 678 AIYLD---HQLSQDECRGTLYKYRSEDLDIDTKL----SRLCEQDKVVQALEEKLQQLHK 730
Query: 95 EKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQ-------RRIVLLDQEIYRADFD 147
EK ++ + E P +N++ + LQ R + E+ RA +
Sbjct: 731 EKYTLEQALLSASQEIEMNAENPAAIQNVILQRDDLQNGLLSTCREVSRATAELERAWRE 790
Query: 148 ------EISRGPNHVQTQIKLL 163
+++ NH+Q Q++ L
Sbjct: 791 YDKLEYDVTVTKNHMQEQLERL 812
>gi|295836189|ref|ZP_06823122.1| ATP dependent DNA helicase [Streptomyces sp. SPB74]
gi|295825898|gb|EDY42225.2| ATP dependent DNA helicase [Streptomyces sp. SPB74]
Length = 1551
Score = 36.9 bits (84), Expect = 0.91, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 11/126 (8%)
Query: 11 CLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPR-AISKLYTSESVLLTTRL 69
LF + LY+ L E + + LLS+ L R + +L E + R
Sbjct: 878 FARSLLFGYVAQFLYEGDSPLAERRAAALSLDSRLLSELLGRAELRELLDPEVLAELERE 937
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQ 129
+Q WL RA++D + +++ D + P + + L E
Sbjct: 938 VQ---WLTEDRAVKDAEGVAD-------RLRLLGPLTDEELAARGAEPSYVRELAEARRA 987
Query: 130 LQRRIV 135
++ RI
Sbjct: 988 IEVRIA 993
>gi|297591087|ref|ZP_06949725.1| large surface anchored protein [Staphylococcus aureus subsp. aureus
MN8]
gi|297575973|gb|EFH94689.1| large surface anchored protein [Staphylococcus aureus subsp. aureus
MN8]
Length = 2787
Score = 36.9 bits (84), Expect = 0.97, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 12/90 (13%)
Query: 79 QRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLD 138
QR +++G+ T +Q+ EK ++ T L +NL + +L++ + L+
Sbjct: 2646 QRVIDNGDATAQQISDEKHRVD----------NALTALNQAKQNLTADTHELEQAVHQLN 2695
Query: 139 QEIYRADFDEISRGP--NHVQTQIKLLEAC 166
+ S N ++ L +
Sbjct: 2696 RTGTTTGKKPASITAYNNSIRALQSDLTSA 2725
>gi|283958200|ref|ZP_06375651.1| cell wall associated fibronectin-binding protein [Staphylococcus
aureus subsp. aureus A017934/97]
gi|283790349|gb|EFC29166.1| cell wall associated fibronectin-binding protein [Staphylococcus
aureus subsp. aureus A017934/97]
Length = 2985
Score = 36.9 bits (84), Expect = 0.97, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 12/90 (13%)
Query: 79 QRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLD 138
QR +++G+ T +Q+ EK ++ T L +NL + +L++ + L+
Sbjct: 2646 QRVIDNGDATAQQISDEKHRVD----------NALTALNQAKQNLTADTHELEQAVHQLN 2695
Query: 139 QEIYRADFDEISRGP--NHVQTQIKLLEAC 166
+ S N ++ L +
Sbjct: 2696 RTGTTTGKKPASITAYNNSIRALQSDLTSA 2725
>gi|282904016|ref|ZP_06311904.1| cell wall associated fibronectin-binding protein [Staphylococcus
aureus subsp. aureus C160]
gi|282595634|gb|EFC00598.1| cell wall associated fibronectin-binding protein [Staphylococcus
aureus subsp. aureus C160]
Length = 10468
Score = 36.9 bits (84), Expect = 0.97, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 12/90 (13%)
Query: 79 QRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLD 138
QR +++G+ T +Q+ EK ++ T L +NL + +L++ + L+
Sbjct: 2646 QRVIDNGDATAQQISDEKHRVD----------NALTALNQAKQNLTADTHELEQAVHQLN 2695
Query: 139 QEIYRADFDEISRGP--NHVQTQIKLLEAC 166
+ S N ++ L +
Sbjct: 2696 RTGTTTGKKPASITAYNNSIRALQSDLTSA 2725
>gi|282905783|ref|ZP_06313638.1| cell wall associated fibronectin-binding protein [Staphylococcus
aureus subsp. aureus Btn1260]
gi|282331075|gb|EFB60589.1| cell wall associated fibronectin-binding protein [Staphylococcus
aureus subsp. aureus Btn1260]
Length = 8193
Score = 36.9 bits (84), Expect = 0.97, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 12/90 (13%)
Query: 79 QRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLD 138
QR +++G+ T +Q+ EK ++ T L +NL + +L++ + L+
Sbjct: 2646 QRVIDNGDATAQQISDEKHRVD----------NALTALNQAKQNLTADTHELEQAVHQLN 2695
Query: 139 QEIYRADFDEISRGP--NHVQTQIKLLEAC 166
+ S N ++ L +
Sbjct: 2696 RTGTTTGKKPASITAYNNSIRALQSDLTSA 2725
>gi|282911014|ref|ZP_06318816.1| large surface anchored protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282324709|gb|EFB55019.1| large surface anchored protein [Staphylococcus aureus subsp. aureus
WBG10049]
Length = 6830
Score = 36.9 bits (84), Expect = 0.97, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 12/90 (13%)
Query: 79 QRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLD 138
QR +++G+ T +Q+ EK ++ T L +NL + +L++ + L+
Sbjct: 2401 QRVIDNGDATAQQISDEKHRVD----------NALTALNQAKQNLTADTHELEQAVHQLN 2450
Query: 139 QEIYRADFDEISRGP--NHVQTQIKLLEAC 166
+ S N ++ L +
Sbjct: 2451 RTGTTTGKKPASITAYNNSIRALQSDLTSA 2480
>gi|282919147|ref|ZP_06326882.1| ebhB [Staphylococcus aureus subsp. aureus C427]
gi|282316957|gb|EFB47331.1| ebhB [Staphylococcus aureus subsp. aureus C427]
Length = 4509
Score = 36.9 bits (84), Expect = 0.97, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 12/90 (13%)
Query: 79 QRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLD 138
QR +++G+ T +Q+ EK ++ T L +NL + +L++ + L+
Sbjct: 2646 QRVIDNGDATAQQISDEKHRVD----------NALTALNQAKQNLTADTHELEQAVHQLN 2695
Query: 139 QEIYRADFDEISRGP--NHVQTQIKLLEAC 166
+ S N ++ L +
Sbjct: 2696 RTGTTTGKKPASITAYNNSIRALQSDLTSA 2725
>gi|257428160|ref|ZP_05604558.1| cell wall associated fibronectin-binding protein [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257436390|ref|ZP_05612437.1| large surface anchored protein [Staphylococcus aureus subsp. aureus
M876]
gi|282924331|ref|ZP_06332005.1| ebhB [Staphylococcus aureus subsp. aureus C101]
gi|257275001|gb|EEV06488.1| cell wall associated fibronectin-binding protein [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257284672|gb|EEV14792.1| large surface anchored protein [Staphylococcus aureus subsp. aureus
M876]
gi|282313718|gb|EFB44111.1| ebhB [Staphylococcus aureus subsp. aureus C101]
Length = 3660
Score = 36.9 bits (84), Expect = 0.97, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 12/90 (13%)
Query: 79 QRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLD 138
QR +++G+ T +Q+ EK ++ T L +NL + +L++ + L+
Sbjct: 2646 QRVIDNGDATAQQISDEKHRVD----------NALTALNQAKQNLTADTHELEQAVHQLN 2695
Query: 139 QEIYRADFDEISRGP--NHVQTQIKLLEAC 166
+ S N ++ L +
Sbjct: 2696 RTGTTTGKKPASITAYNNSIRALQSDLTSA 2725
>gi|257425501|ref|ZP_05601926.1| cell wall associated fibronectin-binding protein [Staphylococcus
aureus subsp. aureus 55/2053]
gi|257271958|gb|EEV04096.1| cell wall associated fibronectin-binding protein [Staphylococcus
aureus subsp. aureus 55/2053]
Length = 3660
Score = 36.9 bits (84), Expect = 0.97, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 12/90 (13%)
Query: 79 QRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLD 138
QR +++G+ T +Q+ EK ++ T L +NL + +L++ + L+
Sbjct: 2646 QRVIDNGDATAQQISDEKHRVD----------NALTALNQAKQNLTADTHELEQAVHQLN 2695
Query: 139 QEIYRADFDEISRGP--NHVQTQIKLLEAC 166
+ S N ++ L +
Sbjct: 2696 RTGTTTGKKPASITAYNNSIRALQSDLTSA 2725
>gi|312438162|gb|ADQ77233.1| extracellular matrix binding protein [Staphylococcus aureus subsp.
aureus TCH60]
Length = 7075
Score = 36.9 bits (84), Expect = 0.97, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 12/90 (13%)
Query: 79 QRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLD 138
QR +++G+ T +Q+ EK ++ T L +NL + +L++ + L+
Sbjct: 2646 QRVIDNGDATAQQISDEKHRVD----------NALTALNQAKQNLTADTHELEQAVHQLN 2695
Query: 139 QEIYRADFDEISRGP--NHVQTQIKLLEAC 166
+ S N ++ L +
Sbjct: 2696 RTGTTTGKKPASITAYNNSIRALQSDLTSA 2725
>gi|49483625|ref|YP_040849.1| hypothetical protein SAR1447 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|81651134|sp|Q6GGX3|EBH_STAAR RecName: Full=Extracellular matrix-binding protein ebh; AltName:
Full=ECM-binding protein homolog; Flags: Precursor
gi|49241754|emb|CAG40444.1| very large surface anchored protein [Staphylococcus aureus subsp.
aureus MRSA252]
Length = 10746
Score = 36.9 bits (84), Expect = 0.97, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 12/90 (13%)
Query: 79 QRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLD 138
QR +++G+ T +Q+ EK ++ T L +NL + +L++ + L+
Sbjct: 2646 QRVIDNGDATAQQISDEKHRVD----------NALTALNQAKQNLTADTHELEQAVHQLN 2695
Query: 139 QEIYRADFDEISRGP--NHVQTQIKLLEAC 166
+ S N ++ L +
Sbjct: 2696 RTGTTTGKKPASITAYNNSIRALQSDLTSA 2725
>gi|227487586|ref|ZP_03917902.1| type I site-specific deoxyribonuclease [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227092404|gb|EEI27716.1| type I site-specific deoxyribonuclease [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 1195
Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%)
Query: 76 LFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIV 135
L L +A ++ E E+ + + + +L L E Q R+
Sbjct: 192 LLLSKAEQEKQDQAEAHARERARFEAKAKSAEEQAALTKKLEEEIAKLREELVAQQARLA 251
Query: 136 LLDQEIYRADFDEISRGPNHVQTQIKLLEACFEN 169
+ +++ E + + Q++ F +
Sbjct: 252 VPQKQVLPPTVSEAQTRKDLIDPQLERAGFAFGS 285
>gi|184097730|gb|ACC66282.1| alpha-terpineol synthase [Magnolia grandiflora]
Length = 592
Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 34/83 (40%), Gaps = 14/83 (16%)
Query: 84 DGNMTLEQVMSEKEK-IKFDYSGLDSTVPGWTELPCFFKNLVERSSQL--QRRIVLLDQE 140
+G TL++ + + ++ +DS K LVE + +L R++ L+
Sbjct: 201 EGETTLDEAKAFTYRHLRGLKGNIDSN----------LKGLVEHALELPLHWRVLRLEAR 250
Query: 141 IYRADFDEISRGPNHVQTQIKLL 163
Y ++ + N + ++ L
Sbjct: 251 WYIDTYERM-EDMNPLLLELAKL 272
>gi|296491142|gb|DAA33215.1| pentraxin-related protein PTX3 precursor [Bos taurus]
Length = 382
Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 27/84 (32%), Gaps = 1/84 (1%)
Query: 82 LEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQEI 141
+ G + Q + + P T L +L++ S RR+ L+
Sbjct: 80 MLRGELQKLQAELGRLEGSLQKLC-GPEAPSETRLARALDDLLQASRDAGRRLARLEDAG 138
Query: 142 YRADFDEISRGPNHVQTQIKLLEA 165
+E R V +++ A
Sbjct: 139 ALRPQEEAGRALGAVLEELRRTRA 162
>gi|256394804|ref|YP_003116368.1| hypothetical protein Caci_5668 [Catenulispora acidiphila DSM 44928]
gi|256361030|gb|ACU74527.1| conserved hypothetical protein [Catenulispora acidiphila DSM 44928]
Length = 458
Score = 36.9 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 21/55 (38%)
Query: 68 RLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKN 122
R++ SWLF + G + V E +++ + V +P F +
Sbjct: 307 RVLHPASWLFAGTGVTAGEVLRNTVGGEYDQVDVNQPTTPPDVDVLAAIPIRFLS 361
>gi|115495701|ref|NP_001069727.1| pentraxin-related protein PTX3 precursor [Bos taurus]
gi|122143492|sp|Q0VCG9|PTX3_BOVIN RecName: Full=Pentraxin-related protein PTX3; AltName:
Full=Pentaxin-related protein PTX3; Flags: Precursor
gi|111305083|gb|AAI20176.1| Pentraxin-related gene, rapidly induced by IL-1 beta [Bos taurus]
Length = 382
Score = 36.9 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 27/84 (32%), Gaps = 1/84 (1%)
Query: 82 LEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQEI 141
+ G + Q + + P T L +L++ S RR+ L+
Sbjct: 80 MLRGELQKLQAELGRLEGSLQKLC-GPEAPSETRLARALDDLLQASRDAGRRLARLEDAG 138
Query: 142 YRADFDEISRGPNHVQTQIKLLEA 165
+E R V +++ A
Sbjct: 139 ALRPQEEAGRALGAVLEELRRTRA 162
>gi|323439054|gb|EGA96785.1| hypothetical protein SAO11_2114 [Staphylococcus aureus O11]
Length = 3125
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 12/90 (13%)
Query: 79 QRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLD 138
QR +++G+ T +Q+ EK ++ T L +NL + L++ + L+
Sbjct: 2649 QRVIDNGDATAQQISDEKHRVD----------NALTALNQAKQNLTADTHALEQAVQQLN 2698
Query: 139 QEIYRADFDEISRGP--NHVQTQIKLLEAC 166
+ S N ++ L +
Sbjct: 2699 RTGTTTGKKPASITAYNNSIRALQSDLTSA 2728
>gi|220904359|ref|YP_002479671.1| Smr protein/MutS2 [Desulfovibrio desulfuricans subsp. desulfuricans
str. ATCC 27774]
gi|219868658|gb|ACL48993.1| Smr protein/MutS2 [Desulfovibrio desulfuricans subsp. desulfuricans
str. ATCC 27774]
Length = 817
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Query: 42 EGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKF 101
+ +++ R + E + L + S L RA ++G T +Q + E +++
Sbjct: 575 QEQDKTRSAARHEREKLEKERLRLHDEVRTKASELM--RAWKEGRATHKQALKEMARLRA 632
Query: 102 DYSGLDSTVPGWTELP 117
D+ + LP
Sbjct: 633 SLVPDDTADKSGSVLP 648
>gi|90420328|ref|ZP_01228236.1| xanthine dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
gi|90335662|gb|EAS49412.1| xanthine dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
Length = 808
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Query: 80 RALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQ 139
RA+ G ++ K SG + ELP + + S + RI +D
Sbjct: 30 RAIRGG-VSAALAHDSGAK---HVSGAARYIDDDPELPGTLQIFIAMSERAHARIRSMDL 85
Query: 140 EIYRADF 146
+ RA
Sbjct: 86 DAVRAAP 92
>gi|332688191|dbj|BAK22650.1| nervous wreck S [Bombyx mori]
Length = 878
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 9/77 (11%)
Query: 53 AISKLYTSESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEK-EKIKFDYSGLDSTVP 111
+++ E+ TR+++ S ++ A ++ Q M E K+ +
Sbjct: 350 SVAVTLAQEARRWATRVVREAS--LVRDANRK--ISSYQAMRESGHKVDPNEPNGPELEV 405
Query: 112 GWTELPCFFKNLVERSS 128
EL + + RS
Sbjct: 406 KMDEL----RATIRRSE 418
>gi|291485675|dbj|BAI86750.1| hypothetical protein BSNT_04746 [Bacillus subtilis subsp. natto
BEST195]
Length = 180
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 50/153 (32%), Gaps = 9/153 (5%)
Query: 4 RVSGSISCLNRRLFSMRLKVLYKESIALV-EETSCYFDREGHLLSKTLPRAISKLYTSES 62
+ S + L S + Y E + LV E D + P +S+ +S
Sbjct: 34 QGSSFVWLLESTSGSQAVYDNYNERVRLVIAENGTVLDVFPIDYALQSPHNLSEEV-CQS 92
Query: 63 VLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKN 122
+ +T+ + + R + + + E K++F+ + L +
Sbjct: 93 LKESTKKTLIAKRDEIHRKWCEAELAFHENSYEIAKVRFELIDAGTEEA--AALNSRLAD 150
Query: 123 LVERSSQLQRRIVLLDQEIYRADFDEISRGPNH 155
L + +L D+ R + EI R
Sbjct: 151 LCADNKRLHE-----DRSALRKERTEIERALVP 178
>gi|70981506|ref|XP_731535.1| C6 transcription factor [Aspergillus fumigatus Af293]
gi|66843904|gb|EAL84245.1| C6 transcription factor, putative [Aspergillus fumigatus Af293]
gi|159122757|gb|EDP47878.1| C6 transcription factor, putative [Aspergillus fumigatus A1163]
Length = 799
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 7/80 (8%)
Query: 84 DGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQEIYR 143
+G+ Q + + KI+ S G P + + + LQ R+ L++++
Sbjct: 79 EGHTPPPQAVDLQTKIRPAAPTAQSQPQG----PNYDQTKII--QDLQNRVRRLEEQLCD 132
Query: 144 ADFDEISRGPNH-VQTQIKL 162
+ + GPN V L
Sbjct: 133 LPLSKGAIGPNPSVSPSQAL 152
>gi|297207906|ref|ZP_06924339.1| extracellular matrix binding protein [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|296887480|gb|EFH26380.1| extracellular matrix binding protein [Staphylococcus aureus subsp.
aureus ATCC 51811]
Length = 6529
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 12/90 (13%)
Query: 79 QRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLD 138
QR +++G+ T +Q+ EK ++ T L +NL + L++ + L+
Sbjct: 2650 QRVIDNGDATPQQISEEKHRVD----------NALTALNQAKQNLTADTHTLEQAVQQLN 2699
Query: 139 QEIYRADFDEISRGP--NHVQTQIKLLEAC 166
+ S N + L +
Sbjct: 2700 RTGTTTGKKPASITAYNNSMHALQAELTSA 2729
>gi|300911991|ref|ZP_07129434.1| cell wall associated fibronectin-binding protein [Staphylococcus
aureus subsp. aureus TCH70]
gi|300886237|gb|EFK81439.1| cell wall associated fibronectin-binding protein [Staphylococcus
aureus subsp. aureus TCH70]
Length = 9904
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 12/90 (13%)
Query: 79 QRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLD 138
QR +++G+ T +Q+ EK ++ T L +NL + L++ + L+
Sbjct: 2650 QRVIDNGDATPQQISEEKHRVD----------NALTALNQAKQNLTADTHTLEQAVQQLN 2699
Query: 139 QEIYRADFDEISRGP--NHVQTQIKLLEAC 166
+ S N + L +
Sbjct: 2700 RTGTTTGKKPASITAYNNSMHALQAELTSA 2729
>gi|21283053|ref|NP_646141.1| hypothetical protein MW1324 [Staphylococcus aureus subsp. aureus MW2]
gi|81762503|sp|Q8NWQ6|EBH_STAAW RecName: Full=Extracellular matrix-binding protein ebh; AltName:
Full=ECM-binding protein homolog; Flags: Precursor
gi|21204492|dbj|BAB95189.1| ebh [Staphylococcus aureus subsp. aureus MW2]
Length = 9904
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 12/90 (13%)
Query: 79 QRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLD 138
QR +++G+ T +Q+ EK ++ T L +NL + L++ + L+
Sbjct: 2650 QRVIDNGDATPQQISEEKHRVD----------NALTALNQAKQNLTADTHTLEQAVQQLN 2699
Query: 139 QEIYRADFDEISRGP--NHVQTQIKLLEAC 166
+ S N + L +
Sbjct: 2700 RTGTTTGKKPASITAYNNSMHALQAELTSA 2729
>gi|283770507|ref|ZP_06343399.1| extracellular matrix-binding protein ebhB [Staphylococcus aureus
subsp. aureus H19]
gi|283460654|gb|EFC07744.1| extracellular matrix-binding protein ebhB [Staphylococcus aureus
subsp. aureus H19]
Length = 3164
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 12/90 (13%)
Query: 79 QRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLD 138
QR +++G+ T +Q+ EK ++ T L +NL + L++ + L+
Sbjct: 2650 QRIIDNGDATAQQISDEKHRVD----------NALTALNQAKQNLTADTHALEQAVQQLN 2699
Query: 139 QEIYRADFDEISRGP--NHVQTQIKLLEAC 166
+ S N + L +
Sbjct: 2700 RTGTTTGKKPASINAYNNSMHALQAELTSA 2729
>gi|282916702|ref|ZP_06324460.1| extracellular matrix-binding protein [Staphylococcus aureus subsp.
aureus D139]
gi|282319189|gb|EFB49541.1| extracellular matrix-binding protein [Staphylococcus aureus subsp.
aureus D139]
Length = 9011
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 12/90 (13%)
Query: 79 QRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLD 138
QR +++G+ T +Q+ EK ++ T L +NL + L++ + L+
Sbjct: 2603 QRIIDNGDATAQQISDEKHRVD----------NALTALNQAKQNLTADTHALEQAVQQLN 2652
Query: 139 QEIYRADFDEISRGP--NHVQTQIKLLEAC 166
+ S N + L +
Sbjct: 2653 RTGTTTGKKPASINAYNNSMHALQAELTSA 2682
>gi|332688187|dbj|BAK22648.1| nervous wreck L [Bombyx mori]
Length = 1003
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 9/77 (11%)
Query: 53 AISKLYTSESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEK-EKIKFDYSGLDSTVP 111
+++ E+ TR+++ S ++ A ++ Q M E K+ +
Sbjct: 350 SVAVTLAQEARRWATRVVREAS--LVRDANRK--ISSYQAMRESGHKVDPNEPNGPELEV 405
Query: 112 GWTELPCFFKNLVERSS 128
EL + + RS
Sbjct: 406 KMDEL----RATIRRSE 418
>gi|332688189|dbj|BAK22649.1| nervous wreck M [Bombyx mori]
Length = 978
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 9/77 (11%)
Query: 53 AISKLYTSESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEK-EKIKFDYSGLDSTVP 111
+++ E+ TR+++ S ++ A ++ Q M E K+ +
Sbjct: 325 SVAVTLAQEARRWATRVVREAS--LVRDANRK--ISSYQAMRESGHKVDPNEPNGPELEV 380
Query: 112 GWTELPCFFKNLVERSS 128
EL + + RS
Sbjct: 381 KMDEL----RATIRRSE 393
>gi|68270941|gb|AAY88965.1| geraniol synthase [Perilla citriodora]
gi|78192330|gb|ABB30216.1| geraniol synthase [Perilla citriodora]
gi|78192332|gb|ABB30217.1| geraniol synthase [Perilla citriodora]
Length = 603
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 34/105 (32%), Gaps = 24/105 (22%)
Query: 66 TTRLMQM--VSWLFLQRALEDGNMTLEQVMSEKEKI---KFDYSGLDSTVPGWTELPCFF 120
T L+Q+ S+L + +G TLEQ K K D
Sbjct: 199 TKGLLQLYEASFL-----VREGEDTLEQARQFATKFLRRKLDEIDD-----------NHL 242
Query: 121 KNLVERSSQ--LQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLL 163
+ + S + L RI L+ + + N V ++ L
Sbjct: 243 LSCIHHSLEIPLHWRIQRLEARWFLDAYATRH-DMNPVILELAKL 286
>gi|78192334|gb|ABB30218.1| geraniol synthase [Perilla frutescens]
gi|114215673|gb|ABI54448.1| geraniol synthase [Perilla frutescens var. crispa]
Length = 603
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 34/105 (32%), Gaps = 24/105 (22%)
Query: 66 TTRLMQM--VSWLFLQRALEDGNMTLEQVMSEKEKI---KFDYSGLDSTVPGWTELPCFF 120
T L+Q+ S+L + +G TLEQ K K D
Sbjct: 199 TKGLLQLYEASFL-----VREGEDTLEQARQFATKFLRRKLDEIDD-----------NHL 242
Query: 121 KNLVERSSQ--LQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLL 163
+ + S + L RI L+ + + N V ++ L
Sbjct: 243 LSCIHHSLEIPLHWRIQRLEARWFLDAYATRH-DMNPVILELAKL 286
>gi|117925610|ref|YP_866227.1| 1A family penicillin-binding protein [Magnetococcus sp. MC-1]
gi|117609366|gb|ABK44821.1| penicillin-binding protein, 1A family [Magnetococcus sp. MC-1]
Length = 862
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 76 LFLQRALEDGNMTLEQVMSEKEK-IKFDYSGLDSTVPGWTELPCFFKNLVER--SSQLQR 132
+ LQR + G +T EQ + E + ++ + L + L+E SS+L R
Sbjct: 249 VILQRMFDVGQITREQAIEEAARPLELARPQVPLEQVAPHYLEHVRRTLLEEWGSSRLYR 308
>gi|109081266|ref|XP_001093485.1| PREDICTED: GRINL1A complex locus protein 1 isoform 3 [Macaca
mulatta]
Length = 438
Score = 36.1 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 6/100 (6%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIECMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY--RADFDEISRGPNHVQTQIKLL 163
S+ L+ RI LD ++ + ++ N +Q+++ L
Sbjct: 345 ASASLRERIRHLDDMVHCQQKKVKQMVEENNELQSRLDYL 384
>gi|302522266|ref|ZP_07274608.1| LOW QUALITY PROTEIN: ATP-dependent DNA helicase [Streptomyces sp.
SPB78]
gi|302431161|gb|EFL02977.1| LOW QUALITY PROTEIN: ATP-dependent DNA helicase [Streptomyces sp.
SPB78]
Length = 1095
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 11/126 (8%)
Query: 11 CLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPR-AISKLYTSESVLLTTRL 69
LF + LY+ L E + + LLS+ L R + +L E + R
Sbjct: 423 FARSLLFGYVAQFLYEGDSPLAERRAAALSLDSRLLSELLGRAELRELLDPEVLAELERE 482
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQ 129
+Q WL RA++D + +++ D + P + + L E
Sbjct: 483 LQ---WLTEDRAVKDAEGVAD-------RLRLLGPLTDEELTARGAEPSYVRELAESRRA 532
Query: 130 LQRRIV 135
++ RI
Sbjct: 533 IEVRIA 538
>gi|108756832|ref|YP_630167.1| hypothetical protein MXAN_1923 [Myxococcus xanthus DK 1622]
gi|108460712|gb|ABF85897.1| hypothetical protein MXAN_1923 [Myxococcus xanthus DK 1622]
Length = 809
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 94 SEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQEIYRADFDEISRGP 153
+E ++ ++ ++ LP K L +R ++QRR+ LD+E YR DF+ S
Sbjct: 520 AELARLTEAQHAREALERRFSALPTSLKTLEDRRERMQRRVDELDREAYRLDFELQSLNA 579
>gi|34596299|gb|AAQ76829.1| GRINL1A complex protein Gcom6 precursor [Homo sapiens]
Length = 415
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 39/101 (38%), Gaps = 6/101 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 254 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 313
Query: 126 RSSQLQRRIVLLDQEIY--RADFDEISRGPNHVQTQIKLLE 164
S+ L+ RI LD ++ + ++ N +Q+++ L
Sbjct: 314 ASASLRERIRHLDDMVHCQQKKVKQMVEENNELQSRLDYLT 354
>gi|317506997|ref|ZP_07964765.1| lipid A biosynthesis acyltransferase [Segniliparus rugosus ATCC
BAA-974]
gi|316254702|gb|EFV14004.1| lipid A biosynthesis acyltransferase [Segniliparus rugosus ATCC
BAA-974]
Length = 304
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 2/96 (2%)
Query: 73 VSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFK--NLVERSSQL 130
W ++RA E T Q +++ + + L + +P LV+RS +
Sbjct: 16 AGWGLVRRAPESLARTAFQAGADRAFRRGAGAQLRKNLARVLAVPADQVPDELVQRSFRS 75
Query: 131 QRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEAC 166
R + D +SR + + + L+A
Sbjct: 76 YARYWREAFRLPAMDHARLSREVDAAVARQERLDAA 111
>gi|194206611|ref|XP_001498363.2| PREDICTED: similar to GRINL1A upstream protein [Equus caballus]
Length = 466
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 49/146 (33%), Gaps = 26/146 (17%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISK---- 56
M S +L + K E AL+EET+ + K L IS
Sbjct: 238 MREMTKKLYSQYEEKLHEEQQKHN-AEKEALLEETNSFLKAIEEANKKMLAAEISLEEKD 296
Query: 57 LYTSESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL 116
E L R+ + L LQ + M+ E S+KE+
Sbjct: 297 QRIGELDRLIERMEKERHQLQLQLLEHETEMSGEITDSDKERY----------------- 339
Query: 117 PCFFKNLVERSSQLQRRIVLLDQEIY 142
+ L E S+ L+ RI LD ++
Sbjct: 340 ----QQLEEASASLRERIRHLDDMVH 361
>gi|227541299|ref|ZP_03971348.1| type I site-specific deoxyribonuclease [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227182850|gb|EEI63822.1| type I site-specific deoxyribonuclease [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 1195
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 30/92 (32%)
Query: 76 LFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIV 135
L L +A ++ E E+ + + + +L L E Q R+
Sbjct: 192 LLLSKAEQEKQDQAEAHARERARFEAKAKSAEEQAALTKKLEEEIAKLREELVAQQARLA 251
Query: 136 LLDQEIYRADFDEISRGPNHVQTQIKLLEACF 167
+ +++ E + + Q++ F
Sbjct: 252 VPQKQVLPPTVSEAQTRKDLIDPQLERAGFAF 283
>gi|303233273|ref|ZP_07319945.1| NlpC/P60 family protein [Atopobium vaginae PB189-T1-4]
gi|302480663|gb|EFL43751.1| NlpC/P60 family protein [Atopobium vaginae PB189-T1-4]
Length = 392
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 6/94 (6%)
Query: 78 LQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTV-PGWTELPCFFKNLVERSSQLQR---R 133
LQR T +++ + K+K+ L + + P +LV S +Q R
Sbjct: 68 LQRTAYSIEKTKDEIFTTKQKLATAKEQLGKRIRSAYKSGPLSLLSLVMGSVDMQDLVSR 127
Query: 134 IVLLDQEIYRADFD--EISRGPNHVQTQIKLLEA 165
I LD E+ + Q L+A
Sbjct: 128 IHYLDAISSEDARSINEVKTLSEELVDQHNKLQA 161
>gi|297696741|ref|XP_002825537.1| PREDICTED: GRINL1A complex locus protein 1-like isoform 2 [Pongo
abelii]
Length = 438
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 6/100 (6%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY--RADFDEISRGPNHVQTQIKLL 163
S+ L+ RI LD ++ + ++ N +Q+++ L
Sbjct: 345 ASASLRERIRHLDDMVHCQQKKVKQMVEENNELQSRLDYL 384
>gi|109081264|ref|XP_001093603.1| PREDICTED: GRINL1A complex locus protein 1 isoform 4 [Macaca
mulatta]
Length = 466
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIECMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 345 ASASLRERIRHLDDMVH 361
>gi|333024065|ref|ZP_08452129.1| putative ATP dependent DNA helicase [Streptomyces sp. Tu6071]
gi|332743917|gb|EGJ74358.1| putative ATP dependent DNA helicase [Streptomyces sp. Tu6071]
Length = 1550
Score = 35.3 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 11/126 (8%)
Query: 11 CLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPR-AISKLYTSESVLLTTRL 69
LF + LY+ L E + + LLS+ L R + +L E + R
Sbjct: 878 FARSLLFGYVAQFLYEGDSPLAERRAAALSLDSRLLSELLGRAELRELLDPEVLAELERE 937
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQ 129
+Q WL RA++D + +++ D + P + + L E
Sbjct: 938 LQ---WLTEDRAVKDAEGVAD-------RLRLLGPLTDEELTTRGAEPSYVRELAESRRA 987
Query: 130 LQRRIV 135
++ RI
Sbjct: 988 IEVRIA 993
>gi|109081262|ref|XP_001093725.1| PREDICTED: GRINL1A complex locus protein 1 isoform 5 [Macaca
mulatta]
Length = 445
Score = 35.3 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIECMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 345 ASASLRERIRHLDDMVH 361
>gi|255956087|ref|XP_002568796.1| Pc21g18010 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590507|emb|CAP96698.1| Pc21g18010 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 545
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 100 KFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRR 133
D + D G ELP F+ ++E+S +L R
Sbjct: 31 GLDAAREDRITVGLDELPEEFRAVLEQSHELHLR 64
>gi|260817908|ref|XP_002603827.1| hypothetical protein BRAFLDRAFT_101330 [Branchiostoma floridae]
gi|229289150|gb|EEN59838.1| hypothetical protein BRAFLDRAFT_101330 [Branchiostoma floridae]
Length = 410
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 28/95 (29%), Gaps = 5/95 (5%)
Query: 79 QRALEDGNMTLEQVM-----SEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRR 133
QR M M + + + + + ++ S L ++
Sbjct: 265 QRLCSLSEMKQHPAMAGVDWDSLQTLTVPSPFVPPKDHLNCDPTFELEEMIIESKPLHKK 324
Query: 134 IVLLDQEIYRADFDEISRGPNHVQTQIKLLEACFE 168
L ++ + N +Q Q+ L+ F+
Sbjct: 325 KKRLAKQHSDRRQSNNAALQNPLQPQLDQLQRQFK 359
>gi|109081260|ref|XP_001094176.1| PREDICTED: GRINL1A complex locus protein 1 isoform 6 [Macaca
mulatta]
Length = 550
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIECMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 345 ASASLRERIRHLDDMVH 361
>gi|329890268|ref|ZP_08268611.1| helix-turn-helix family protein [Brevundimonas diminuta ATCC 11568]
gi|328845569|gb|EGF95133.1| helix-turn-helix family protein [Brevundimonas diminuta ATCC 11568]
Length = 516
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 33/104 (31%), Gaps = 5/104 (4%)
Query: 41 REGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQRALE--DGNMTLEQVMSEKEK 98
+G + + LY S+ TR QM L R + + +
Sbjct: 247 GQGRGAMRRFDPSARILYVDASLPGATRAFQMAHQLVRLRFENLIEHELDRAAFDIPAAR 306
Query: 99 IKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQEIY 142
GL + G LP + +E + +L+ + L +
Sbjct: 307 -DVCRVGLANYAAGALLLPY--RAFLEAARELRHDVDRLRNRFH 347
>gi|111494235|ref|NP_689664.3| GRINL1A combined protein isoform 8 [Homo sapiens]
gi|32364134|gb|AAP75897.1| GRINL1A upstream protein 2 precursor [Homo sapiens]
gi|34596309|gb|AAQ76834.1| GRINL1A combined protein Gcom9 precursor [Homo sapiens]
Length = 438
Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 39/101 (38%), Gaps = 6/101 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY--RADFDEISRGPNHVQTQIKLLE 164
S+ L+ RI LD ++ + ++ N +Q+++ L
Sbjct: 345 ASASLRERIRHLDDMVHCQQKKVKQMVEENNELQSRLDYLT 385
>gi|114657237|ref|XP_001171934.1| PREDICTED: GRINL1A complex locus protein 1 isoform 5 [Pan
troglodytes]
Length = 438
Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 39/101 (38%), Gaps = 6/101 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY--RADFDEISRGPNHVQTQIKLLE 164
S+ L+ RI LD ++ + ++ N +Q+++ L
Sbjct: 345 ASASLRERIRHLDDMVHCQQKKVKQMVEENNELQSRLDYLT 385
>gi|56964062|ref|YP_175793.1| chromosome segregation protein SMC [Bacillus clausii KSM-K16]
gi|56910305|dbj|BAD64832.1| chromosome segregation protein SMC [Bacillus clausii KSM-K16]
Length = 1188
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 79 QRALEDGNMTLEQVMSEKEKIKFDYSGLDSTV----PGWTELPCFFKNLVERSSQLQRRI 134
QRA ++ ++ E+ E E+I+ D+ + E+ K + S +L+ +I
Sbjct: 733 QRAHQEASIAYERARQEVERIEQQSKEQDAEEAKTQDRFLEIEEAEKKAIAESMRLEEKI 792
Query: 135 VLLDQEIYRADFDEIS 150
L+ + +
Sbjct: 793 KRLEARLASEQQSKEE 808
>gi|21241210|ref|NP_640792.1| TetR/AcrR family transcriptional regulator [Xanthomonas axonopodis
pv. citri str. 306]
gi|21106521|gb|AAM35328.1| transcriptional regulator tetR/acrR family [Xanthomonas axonopodis
pv. citri str. 306]
Length = 205
Score = 34.5 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 6/74 (8%)
Query: 85 GNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQEIYRA 144
G M + E E S+ P +L F+ ++E S +L R ++++Y
Sbjct: 66 GEMICSHCLGEIEADVLAAVSAASSPP--EKLRSLFRAIIEASLRLYSR----ERKLYEI 119
Query: 145 DFDEISRGPNHVQT 158
+ V
Sbjct: 120 ATSAATERWPPVIA 133
>gi|297696739|ref|XP_002825536.1| PREDICTED: GRINL1A complex locus protein 1-like isoform 1 [Pongo
abelii]
Length = 466
Score = 34.5 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 345 ASASLRERIRHLDDMVH 361
>gi|302866931|ref|YP_003835568.1| amino acid adenylation domain-containing protein [Micromonospora
aurantiaca ATCC 27029]
gi|302569790|gb|ADL45992.1| amino acid adenylation domain protein [Micromonospora aurantiaca
ATCC 27029]
Length = 1229
Score = 34.5 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 17/54 (31%)
Query: 113 WTELPCFFKNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEAC 166
W E + L+ L R L R D PN Q++LL
Sbjct: 833 WIEGELDLRALMAALGDLHHRHQALHARYRRTDPPTAIIPPNPGMPQLRLLADA 886
>gi|163846246|ref|YP_001634290.1| histidine kinase dimerisation and phosphoacceptor protein
[Chloroflexus aurantiacus J-10-fl]
gi|222524001|ref|YP_002568471.1| integral membrane sensor signal transduction histidine kinase
[Chloroflexus sp. Y-400-fl]
gi|163667535|gb|ABY33901.1| histidine kinase dimerisation and phosphoacceptor region
[Chloroflexus aurantiacus J-10-fl]
gi|222447880|gb|ACM52146.1| integral membrane sensor signal transduction histidine kinase
[Chloroflexus sp. Y-400-fl]
Length = 412
Score = 34.5 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 51/142 (35%), Gaps = 18/142 (12%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTS 60
++ S ++ + +FS+ L L E +A E + L+ + R ++
Sbjct: 154 LTQAPSIALGLIFTLIFSIVLARL-SEQMARTERLAAELRAANEALAASRERELALAAAE 212
Query: 61 ESVLLT-----------TRL---MQMVSWLFLQ---RALEDGNMTLEQVMSEKEKIKFDY 103
E V L T L +Q+ + L RA + ++ E + +++
Sbjct: 213 ERVRLAHEIHDGLGHHLTALHVQLQVAARLLEHDPVRAAQALHLCREAAQAALTEVRQSV 272
Query: 104 SGLDSTVPGWTELPCFFKNLVE 125
+ + S LP + LV
Sbjct: 273 AIMRSNPLAEQPLPVVIERLVH 294
>gi|315506631|ref|YP_004085518.1| amino acid adenylation domain protein [Micromonospora sp. L5]
gi|315413250|gb|ADU11367.1| amino acid adenylation domain protein [Micromonospora sp. L5]
Length = 1227
Score = 34.5 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 17/54 (31%)
Query: 113 WTELPCFFKNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEAC 166
W E + L+ L R L R D PN Q++LL
Sbjct: 831 WIEGELDLRALMAALGDLHHRHQALHARYRRTDPPTAIIPPNPGMPQLRLLADA 884
>gi|298490898|ref|YP_003721075.1| pyridoxamine 5'-phosphate oxidase ['Nostoc azollae' 0708]
gi|298232816|gb|ADI63952.1| pyridoxamine 5'-phosphate oxidase ['Nostoc azollae' 0708]
Length = 214
Score = 34.5 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 27/71 (38%), Gaps = 3/71 (4%)
Query: 71 QMVSWLFLQRALEDG-NMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQ 129
++ +W Q + G + Q + K + G+ +P + RSS+
Sbjct: 133 RLGAWASNQSEVIAGREVLERQWQEFQRKYQNQEVPRPPYWGGFRVIPQEIEFWQGRSSR 192
Query: 130 LQRRIV--LLD 138
L R++ LD
Sbjct: 193 LHDRLLYIRLD 203
>gi|119597930|gb|EAW77524.1| hCG40688, isoform CRA_b [Homo sapiens]
Length = 352
Score = 34.5 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 39/101 (38%), Gaps = 6/101 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 199 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 258
Query: 126 RSSQLQRRIVLLDQEIY--RADFDEISRGPNHVQTQIKLLE 164
S+ L+ RI LD ++ + ++ N +Q+++ L
Sbjct: 259 ASASLRERIRHLDDMVHCQQKKVKQMVEENNELQSRLDYLT 299
>gi|296534633|ref|ZP_06897039.1| acetyl-coA carboxylase carboxyl transferase subunit alpha
[Roseomonas cervicalis ATCC 49957]
gi|296265043|gb|EFH11262.1| acetyl-coA carboxylase carboxyl transferase subunit alpha
[Roseomonas cervicalis ATCC 49957]
Length = 516
Score = 34.2 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 8/137 (5%)
Query: 30 ALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQRALED---GN 86
AL+ E YF + + + VLL RL +W+ +RA E+
Sbjct: 132 ALMPEARSYFATLASVEA-VGENVVRFRTRVPDVLLEQRLASWCAWIVNRRAYEERGFDG 190
Query: 87 MTLEQVMSEKEKIKF----DYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQEIY 142
+ + V S +++ LD+ W P + + + +L R+ L
Sbjct: 191 FSRDPVGSGPYRLREFQTDQRITLDAFDDHWMGRPTARQVVFRQIPELAARVAALQAGDV 250
Query: 143 RADFDEISRGPNHVQTQ 159
+ ++ Q
Sbjct: 251 GLITNVPPDQVAPLRGQ 267
>gi|85701616|ref|NP_001028380.1| GRINL1A complex locus protein 1 [Mus musculus]
gi|123791369|sp|Q3UIJ9|GCOM1_MOUSE RecName: Full=GRINL1A complex locus protein 1
gi|74147210|dbj|BAE27507.1| unnamed protein product [Mus musculus]
gi|148694280|gb|EDL26227.1| mCG7631, isoform CRA_a [Mus musculus]
gi|187951331|gb|AAI39079.1| GRINL1A complex locus [Mus musculus]
gi|187953109|gb|AAI39078.1| GRINL1A complex locus [Mus musculus]
Length = 466
Score = 34.2 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 25/116 (21%)
Query: 31 LVEETSCYF----DREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQRALEDGN 86
L+EET+ + + + + L E L R+ + L LQ +
Sbjct: 267 LLEETNSFLKAIEEANKKMEAAELSLEEKDQKIGELDRLIERMEKERHQLQLQLLEHETE 326
Query: 87 MTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQEIY 142
M+ E S+K + + L E S+ L+ RI LD ++
Sbjct: 327 MSGEMADSDKNRY---------------------QQLEEASASLRERIRHLDDMVH 361
>gi|189036768|sp|A8HRJ3|PDXH_AZOC5 RecName: Full=Pyridoxine/pyridoxamine 5'-phosphate oxidase;
AltName: Full=PNP/PMP oxidase; Short=PNPOx; AltName:
Full=Pyridoxal 5'-phosphate synthase
Length = 212
Score = 34.2 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Query: 68 RLMQMVSWLFLQRALEDGNMTLEQVMSEK-EKIKFDYSGLDSTVPGWTELPCFFKNLVER 126
RL Q+ +W Q +G LE ++ + G+ LP + +R
Sbjct: 127 RLSQIGAWASQQSRPLEGRFALEAAVATTTARYAVGSVPRPPHWTGFRILPVQIEFWHDR 186
Query: 127 SSQLQRRI 134
+L R+
Sbjct: 187 PFRLHDRV 194
>gi|302866930|ref|YP_003835567.1| amino acid adenylation domain-containing protein [Micromonospora
aurantiaca ATCC 27029]
gi|302569789|gb|ADL45991.1| amino acid adenylation domain protein [Micromonospora aurantiaca
ATCC 27029]
Length = 1233
Score = 34.2 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 17/54 (31%)
Query: 113 WTELPCFFKNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEAC 166
W E + L+ L R L R D PN Q++LL
Sbjct: 837 WIEGELDLRALMAALGDLHHRHQALHARYRRTDPPTAIIPPNPGMPQLRLLADA 890
>gi|158422821|ref|YP_001524113.1| pyridoxamine 5'-phosphate oxidase [Azorhizobium caulinodans ORS
571]
gi|158329710|dbj|BAF87195.1| pyridoxamine 5'-phosphate oxidase [Azorhizobium caulinodans ORS
571]
Length = 216
Score = 34.2 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Query: 68 RLMQMVSWLFLQRALEDGNMTLEQVMSEK-EKIKFDYSGLDSTVPGWTELPCFFKNLVER 126
RL Q+ +W Q +G LE ++ + G+ LP + +R
Sbjct: 131 RLSQIGAWASQQSRPLEGRFALEAAVATTTARYAVGSVPRPPHWTGFRILPVQIEFWHDR 190
Query: 127 SSQLQRRI 134
+L R+
Sbjct: 191 PFRLHDRV 198
>gi|148556608|ref|YP_001264190.1| ABC transporter-like protein [Sphingomonas wittichii RW1]
gi|148501798|gb|ABQ70052.1| ABC transporter related [Sphingomonas wittichii RW1]
Length = 594
Score = 34.2 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 32/95 (33%), Gaps = 14/95 (14%)
Query: 19 MRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFL 78
++ L E +A+V T+ Y D S L Y LT RL
Sbjct: 191 RMVQALTDEGMAVVWSTA-YLDEAERCDSVLLLNEGRLAYDGSPGELTGRL--------A 241
Query: 79 QRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGW 113
R+ LEQV E+ + + L S G
Sbjct: 242 GRSFR-----LEQVGDERRTVLAEALDLSSVGDGV 271
>gi|114657243|ref|XP_001171909.1| PREDICTED: GRINL1A upstream protein isoform 3 [Pan troglodytes]
Length = 451
Score = 34.2 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 270 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 329
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 330 ASASLRERIRHLDDMVH 346
>gi|315506632|ref|YP_004085519.1| amino acid adenylation domain protein [Micromonospora sp. L5]
gi|315413251|gb|ADU11368.1| amino acid adenylation domain protein [Micromonospora sp. L5]
Length = 1233
Score = 34.2 bits (77), Expect = 6.3, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 17/54 (31%)
Query: 113 WTELPCFFKNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEAC 166
W E + L+ L R L R D PN Q++LL
Sbjct: 837 WIEGELDLRALMAALGDLHHRHQALHARYRRTDPPTAIIPPNPGMPQLRLLADA 890
>gi|309782806|ref|ZP_07677527.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
gi|308918584|gb|EFP64260.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
Length = 499
Score = 34.2 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 28/90 (31%), Gaps = 3/90 (3%)
Query: 69 LMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSS 128
L+Q+V WL AL+ G T + + + S+ P L + L S
Sbjct: 249 LLQLVGWL---SALQLGAKTYRLTLEHERRRGRSSEDAASSTPVEIALAQPVRTLAHLSR 305
Query: 129 QLQRRIVLLDQEIYRADFDEISRGPNHVQT 158
L R+ L + +
Sbjct: 306 VLHERVHRLTLIAPVVELRLTVTDATPLAP 335
>gi|290958540|ref|YP_003489722.1| hypothetical protein SCAB_41011 [Streptomyces scabiei 87.22]
gi|260648066|emb|CBG71174.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 610
Score = 34.2 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 41/132 (31%), Gaps = 10/132 (7%)
Query: 42 EGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKF 101
GH + I+ +E+ T L ++ + + + S K+ ++
Sbjct: 336 PGHSQQEATQLHIAVQ--AEAAKTTALLTDLLP--TIADLAREQEELAQTWQSVKDDLEA 391
Query: 102 DYSGLDSTVPGWTELPCFFKNL------VERSSQLQRRIVLLDQEIYRADFDEISRGPNH 155
+ L + L VER +L RI L+++ R D +
Sbjct: 392 LDELIAEAEGQLAPLREGLQELLDARSAVERGLELHARIAELEEKRSRLDGEGAVPATRP 451
Query: 156 VQTQIKLLEACF 167
Q + F
Sbjct: 452 AQYIAARVVNGF 463
>gi|289208516|ref|YP_003460582.1| FimV N-terminal domain protein [Thioalkalivibrio sp. K90mix]
gi|288944147|gb|ADC71846.1| FimV N-terminal domain protein [Thioalkalivibrio sp. K90mix]
Length = 826
Score = 34.2 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Query: 76 LFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIV 135
+ QRA +G EQ+ +E++ + + EL L ++L R+
Sbjct: 335 MLSQRAEMEG--MREQITELREELGERGRLAELSSENMAELEEQLSQLRAERNELMARLD 392
Query: 136 LLDQEIYRADFDEISRGP 153
D E + I P
Sbjct: 393 RADAERNAPLHERIMNDP 410
>gi|241666175|ref|YP_002984534.1| hypothetical protein Rpic12D_4622 [Ralstonia pickettii 12D]
gi|240868202|gb|ACS65862.1| conserved hypothetical protein [Ralstonia pickettii 12D]
Length = 540
Score = 34.2 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 36/114 (31%), Gaps = 8/114 (7%)
Query: 45 LLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYS 104
LS + A L SE + L+Q+V WL AL+ G T + + +
Sbjct: 271 ELSGRIDNAEGVLAASEQL-----LLQLVGWL---SALQLGAKTYRLTLEHERRRGRSSE 322
Query: 105 GLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQEIYRADFDEISRGPNHVQT 158
S+ P L + L S L R+ L + +
Sbjct: 323 DAASSTPVEIALAQPVRTLAHLSRVLHERVHRLTLIAPVVELRLTVTDATPLAP 376
>gi|83748141|ref|ZP_00945169.1| Hypothetical cytosolic protein [Ralstonia solanacearum UW551]
gi|83725223|gb|EAP72373.1| Hypothetical cytosolic protein [Ralstonia solanacearum UW551]
Length = 686
Score = 34.2 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 15/100 (15%)
Query: 39 FDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQRALEDG-NMTLEQVMSEKE 97
+ G + S L SE + L+Q+ WL + G +TLE +
Sbjct: 419 LELPGRIDSAE-----GVLAASEQL-----LLQLTGWLAAHQLGTKGYRLTLE----HER 464
Query: 98 KIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLL 137
+ D S+ P L + L S L+ R+ L
Sbjct: 465 RRGRDAQDAASSTPVDILLAQPVRTLAHLSRVLRERVHRL 504
>gi|34596313|gb|AAQ76836.1| GRINL1A combined protein Gcom13 precursor [Homo sapiens]
Length = 435
Score = 34.2 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 254 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 313
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 314 ASASLRERIRHLDDMVH 330
>gi|114657239|ref|XP_001171886.1| PREDICTED: similar to GRINL1A combined protein Gcom13 precursor
isoform 2 [Pan troglodytes]
Length = 435
Score = 34.2 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 254 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 313
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 314 ASASLRERIRHLDDMVH 330
>gi|34596303|gb|AAQ76831.1| GRINL1A combined protein Gcom11 precursor [Homo sapiens]
Length = 397
Score = 34.2 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 216 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 275
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 276 ASASLRERIRHLDDMVH 292
>gi|71068240|gb|AAZ23095.1| possible DNA helicase [Streptomyces fradiae]
Length = 454
Score = 34.2 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
Query: 55 SKLYTSE--SVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPG 112
S L++ E S+ LT R+M + + L + G MT + ++ D S +
Sbjct: 88 SALFSLEMRSLDLTMRVMSAEARIPLHH-MRSGAMTDDDWTRLSRRM-PDISAAPLFLQD 145
Query: 113 WTELPCFFKNLVERSSQLQRR 133
F +L + +L R
Sbjct: 146 DDY--SSFSDLRAHARRLHAR 164
>gi|281399025|gb|ADA68358.1| myocardium-enriched Zo-associated protein [Homo sapiens]
Length = 463
Score = 34.2 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 282 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 341
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 342 ASASLRERIRHLDDMVH 358
>gi|16550282|dbj|BAB70944.1| unnamed protein product [Homo sapiens]
Length = 466
Score = 34.2 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 345 ASASLRERIRHLDDMVH 361
>gi|294632674|ref|ZP_06711233.1| pyoverdine sidechain peptide synthetase III, L-Thr-L-Ser component
[Streptomyces sp. e14]
gi|292830455|gb|EFF88805.1| pyoverdine sidechain peptide synthetase III, L-Thr-L-Ser component
[Streptomyces sp. e14]
Length = 2291
Score = 34.2 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 36/139 (25%), Gaps = 15/139 (10%)
Query: 24 LYKESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQRALE 83
LY L Y R G + LP + + L R
Sbjct: 1241 LYVSGPGL---ARGYLGRPGLTAERFLPDPFAAEPGARMYRTGD----------LARYGA 1287
Query: 84 DGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQEIYR 143
DG++ E+ KI+ LP +LV + R L Y
Sbjct: 1288 DGDLEFLGRADEQVKIRGHRIEPGEIEAALAGLPEVDGSLVIAHRRPGEREARL--IAYV 1345
Query: 144 ADFDEISRGPNHVQTQIKL 162
S ++ ++
Sbjct: 1346 VARAGRSVEAAELRARLGR 1364
>gi|238022829|ref|ZP_04603255.1| hypothetical protein GCWU000324_02746 [Kingella oralis ATCC 51147]
gi|237866032|gb|EEP67168.1| hypothetical protein GCWU000324_02746 [Kingella oralis ATCC 51147]
Length = 436
Score = 34.2 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 31/96 (32%), Gaps = 10/96 (10%)
Query: 77 FLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTE--LPCFFKN-------LVERS 127
L R + + +++ + L E LP + + RS
Sbjct: 204 LLHRTHQAMQQQQRFIADAAHELRTPTTALSLQAERLAEHNLPPELQAQIGSLKTTIARS 263
Query: 128 SQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLL 163
QLQ +++ L + + + + +Q + +
Sbjct: 264 HQLQEQLLTLARSQASPEPAQPAP-ATPIQPIFQRI 298
>gi|114657241|ref|XP_510438.2| PREDICTED: similar to GRINL1A combined protein Gcom11 precursor
isoform 8 [Pan troglodytes]
Length = 397
Score = 34.2 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 216 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 275
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 276 ASASLRERIRHLDDMVH 292
>gi|114657233|ref|XP_001171951.1| PREDICTED: GRINL1A complex locus protein 1 isoform 6 [Pan
troglodytes]
Length = 466
Score = 33.8 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 345 ASASLRERIRHLDDMVH 361
>gi|70166580|ref|NP_001018110.1| GRINL1A upstream protein isoform 7 [Homo sapiens]
gi|238064959|sp|P0CAP1|GCOM1_HUMAN RecName: Full=GRINL1A complex locus protein 1; AltName:
Full=GRINL1A combined protein; Short=Gcom; AltName:
Full=GRINL1A upstream protein; Short=Gup; Flags:
Precursor
gi|32265050|gb|AAP41548.1| GRINL1A upstream protein 1 precursor [Homo sapiens]
gi|34596307|gb|AAQ76833.1| GRINL1A combined protein Gcom8 precursor [Homo sapiens]
gi|75517786|gb|AAI01646.1| GRINL1A complex locus [Homo sapiens]
gi|85567374|gb|AAI12149.1| GRINL1A complex locus [Homo sapiens]
gi|119597928|gb|EAW77522.1| hCG40688, isoform CRA_a [Homo sapiens]
gi|119597929|gb|EAW77523.1| hCG40688, isoform CRA_a [Homo sapiens]
Length = 466
Score = 33.8 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 345 ASASLRERIRHLDDMVH 361
>gi|332235770|ref|XP_003267076.1| PREDICTED: GRINL1A complex locus protein 1 isoform 4 [Nomascus
leucogenys]
Length = 438
Score = 33.8 bits (76), Expect = 7.6, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 6/100 (6%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY--RADFDEISRGPNHVQTQIKLL 163
S+ L+ RI LD ++ + ++ N +Q+++ L
Sbjct: 345 ASASLRERIKHLDDMVHCQQKKVKQMVEENNELQSRLDYL 384
>gi|187926663|ref|YP_001893008.1| conserved hypothetical protein [Ralstonia pickettii 12J]
gi|187728417|gb|ACD29581.1| conserved hypothetical protein [Ralstonia pickettii 12J]
Length = 527
Score = 33.8 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 28/90 (31%), Gaps = 3/90 (3%)
Query: 69 LMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSS 128
L+Q+V WL AL+ G T + + + S+ P L + L S
Sbjct: 277 LLQLVGWL---SALQLGAKTYRLTLEHERRRGRSSEDAASSTPVEIALAQPVRTLAHLSR 333
Query: 129 QLQRRIVLLDQEIYRADFDEISRGPNHVQT 158
L R+ L + +
Sbjct: 334 VLHERVHRLTLIAPVVELRLTVTDATPLAP 363
>gi|16127736|ref|NP_422300.1| AraC family transcriptional regulator [Caulobacter crescentus CB15]
gi|221236557|ref|YP_002518994.1| AraC family transcriptional regulator [Caulobacter crescentus
NA1000]
gi|13425234|gb|AAK25468.1| transcriptional regulator, AraC family [Caulobacter crescentus
CB15]
gi|220965730|gb|ACL97086.1| transcriptional regulator, AraC family [Caulobacter crescentus
NA1000]
Length = 321
Score = 33.8 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 40/127 (31%), Gaps = 9/127 (7%)
Query: 28 SIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQRALEDGNM 87
+++ E T D + +E+ + +WL + A G+
Sbjct: 151 GMSMAELTDQALD----AEAVFPDLRAVADQIAEASTAEAMIAAAEAWLTTRVAACRGDP 206
Query: 88 TLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFF-KNLVER---SSQLQRRIVLLDQEIYR 143
+ + I+ LD P + +R S +L RI LD+ I
Sbjct: 207 DRVDWAAAQL-IRGGAGTLDRLARRIDLAPRGLHRAFRDRLGVSPKLFARIARLDRLIRA 265
Query: 144 ADFDEIS 150
+ D +
Sbjct: 266 RNADPAA 272
>gi|144900590|emb|CAM77454.1| pyridoxamine 5'-phosphate oxidase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 180
Score = 33.8 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 68 RLMQMVSWLFLQRALEDGNMTLEQVMSE-KEKIKFDYSGLDSTVPGWTELPCFFKNLVER 126
R+ Q+ +W LQ +G LE+ ++E K G+ +P + +R
Sbjct: 97 RISQIGAWASLQSRPLEGRFELERRVAEFTAKFGLGEITRPPHWSGFRVVPRAMEFWHDR 156
Query: 127 SSQLQRR 133
+L R
Sbjct: 157 PFRLHDR 163
>gi|114657231|ref|XP_001171871.1| PREDICTED: GRINL1A complex locus protein 1 isoform 1 [Pan
troglodytes]
Length = 445
Score = 33.8 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 345 ASASLRERIRHLDDMVH 361
>gi|34596293|gb|AAQ76826.1| GRINL1A complex protein Gcom3 precursor [Homo sapiens]
Length = 414
Score = 33.8 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 345 ASASLRERIRHLDDMVH 361
>gi|70166430|ref|NP_001018101.1| GRINL1A combined protein isoform 2 [Homo sapiens]
gi|32265052|gb|AAP41549.1| GRINL1A complex protein 2 precursor [Homo sapiens]
Length = 445
Score = 33.8 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 345 ASASLRERIRHLDDMVH 361
>gi|319762600|ref|YP_004126537.1| hypothetical protein Alide_1906 [Alicycliphilus denitrificans BC]
gi|330824690|ref|YP_004387993.1| XRE family transcriptional regulator [Alicycliphilus denitrificans
K601]
gi|317117161|gb|ADU99649.1| Protein of unknown function DUF2083,transcriptional regulator
[Alicycliphilus denitrificans BC]
gi|329310062|gb|AEB84477.1| transcriptional regulator, XRE family [Alicycliphilus denitrificans
K601]
Length = 486
Score = 33.8 bits (76), Expect = 8.2, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 15/109 (13%)
Query: 40 DREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLF-------LQRALEDGNMTLEQV 92
D G + ++ A LY S ++ R QM + L LQR ++ ++ +
Sbjct: 214 DGAGEAMQRSFDAAARVLYLSPALRPAQRAFQMATQLAFLEVPQELQRIVDAAQLSGDAA 273
Query: 93 MSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQEI 141
+ GL + G LP ++ + L I L Q
Sbjct: 274 RA------LARIGLANYFAGALLLPYA--PFLQSAEALHYDIERLGQRW 314
>gi|34596295|gb|AAQ76827.1| GRINL1A complex protein Gcom4 precursor [Homo sapiens]
Length = 407
Score = 33.8 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 345 ASASLRERIRHLDDMVH 361
>gi|20093635|ref|NP_613482.1| hypothetical protein MK0195 [Methanopyrus kandleri AV19]
gi|19886504|gb|AAM01412.1| Uncharacterized conserved protein [Methanopyrus kandleri AV19]
Length = 249
Score = 33.8 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 28/135 (20%)
Query: 27 ESIALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQ---RALE 83
+ + E T Y + E + + P Q+V W L RAL
Sbjct: 129 DGTKVAEGTRAYLELEAKEIHEGKPLTAEL--------------QVVGWGLLHPRPRALV 174
Query: 84 DGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVER---SSQLQRRIVLLDQE 140
G L + + E +I D +V+R S + Q + +++E
Sbjct: 175 RGESALLEALVELTRIHLDE-------DHVDACKRAL-EVVKRTIWSEEYQWAVEKVERE 226
Query: 141 IYRADFDEISRGPNH 155
+ + + +
Sbjct: 227 LRGKEDGPDHQDTSP 241
>gi|318061009|ref|ZP_07979730.1| putative ATP-dependent DNA helicase [Streptomyces sp. SA3_actG]
Length = 1550
Score = 33.8 bits (76), Expect = 8.4, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 11/126 (8%)
Query: 11 CLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPR-AISKLYTSESVLLTTRL 69
LF + LY+ L E + + LLS+ L R + +L E + L
Sbjct: 878 FARSLLFGYVAQFLYEGDSPLAERRAAALSLDSRLLSELLGRAELRELLDPEVLA---EL 934
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQ 129
+ + WL RA++D + +++ D + P + + L E
Sbjct: 935 ERELRWLTEDRAVKDAEGVAD-------RLRLLGPLTDEELTARGAEPSYVRELAESRRA 987
Query: 130 LQRRIV 135
++ RI
Sbjct: 988 IEVRIA 993
>gi|262274535|ref|ZP_06052346.1| excinuclease ABC subunit B [Grimontia hollisae CIP 101886]
gi|262221098|gb|EEY72412.1| excinuclease ABC subunit B [Grimontia hollisae CIP 101886]
Length = 674
Score = 33.8 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 19/109 (17%)
Query: 78 LQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL-----------PCFFKN---- 122
+QRA+E+ + + EK L V EL P K
Sbjct: 562 MQRAIEETERRRAKQQAHNEKHGIVPQKLSKKVADVLELGGKRRSHKPKVPASLKAVAED 621
Query: 123 ---LVERS-SQLQRRIVLLDQEIYRADFDEISRGPNHVQTQIKLLEACF 167
V RS Q++ +I L+ ++Y A + ++ +I L A F
Sbjct: 622 DAAYVVRSPQQIEAQIQKLEAQMYEAAQNLEFETAAGLRDEIAALRALF 670
>gi|126513509|gb|ABO15847.1| halogenase [Streptomyces vitaminophilus]
Length = 557
Score = 33.8 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 69 LMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSS 128
L Q+++ L L+RA D + + + E+ ++ W + P + L++RS
Sbjct: 424 LWQILADLSLKRARLDAESSGDWSVCEQYELGG----------IWFQCPRGLRELIDRSL 473
Query: 129 QLQRRIVL 136
+ +
Sbjct: 474 ETVDEVRR 481
>gi|294627199|ref|ZP_06705786.1| transcriptional regulator, TetR family [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294667676|ref|ZP_06732888.1| transcriptional regulator, TetR family [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292598438|gb|EFF42588.1| transcriptional regulator, TetR family [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292602516|gb|EFF45955.1| transcriptional regulator, TetR family [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 205
Score = 33.8 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 6/74 (8%)
Query: 85 GNMTLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQRRIVLLDQEIYRA 144
G M + E E S+ P +L FK ++E S +L R ++++Y
Sbjct: 66 GEMICSHCLGEIEAEVLAAVSAASSPP--EKLRSLFKAIIEASLRLYSR----ERKLYEI 119
Query: 145 DFDEISRGPNHVQT 158
+ V
Sbjct: 120 ATSAATERWPPVVA 133
>gi|119716214|ref|YP_923179.1| protein phosphatase 2C domain-containing protein [Nocardioides sp.
JS614]
gi|119536875|gb|ABL81492.1| protein phosphatase 2C domain protein [Nocardioides sp. JS614]
Length = 268
Score = 33.8 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 28/88 (31%), Gaps = 7/88 (7%)
Query: 35 TSCYFDREGHLLSKTLPRAISKLYTSESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMS 94
T+ D +L+ L E LTT + QR + G + E+V+
Sbjct: 98 TAVVCDGRRAVLAHIGDSRAYVLRGGELTRLTTDHTYV------QRLVSQGELRPEEVIR 151
Query: 95 EKEK-IKFDYSGLDSTVPGWTELPCFFK 121
+ + D G LP +
Sbjct: 152 HPWRNVVLRSLDGDPVHDGVDLLPLAVQ 179
>gi|168064367|ref|XP_001784134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664334|gb|EDQ51058.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 554
Score = 33.8 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 30/105 (28%), Gaps = 2/105 (1%)
Query: 29 IALVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTT-RLMQMVSWLFLQRALEDGNM 87
+ L+ E + D G S T + E+ LTT + + WL RA D M
Sbjct: 153 LKLLHEVAAS-DAAGRPASATNGGYKLVVSAPEAKKLTTPTITNIQGWLPGLRAEGDSLM 211
Query: 88 TLEQVMSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVERSSQLQR 132
+ L S L S+L
Sbjct: 212 LPTIAIVASYDTFGAAPALASGSDSNGSGVAMLLELARLFSRLYA 256
>gi|34596297|gb|AAQ76828.1| GRINL1A complex protein Gcom5 precursor [Homo sapiens]
Length = 379
Score = 33.8 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 345 ASASLRERIRHLDDMVH 361
>gi|325119345|emb|CBZ54898.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 522
Score = 33.8 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Query: 31 LVEETSCYFDREGHLLSKTLPRAISKLYTSESVLLTTR--LMQMVSWLFLQRALEDGNMT 88
L+E+ + Y +L + +PR + ES+ T+R L+ V+ + QR M
Sbjct: 248 LIEQLASYPAGAKYLATSAIPRRLISELADESLDETSRVSLVHAVAEVIKQRPEIAAEMF 307
Query: 89 LEQVMSEKEKIKFDYSGLDSTVPGWTEL 116
+ + + ST +EL
Sbjct: 308 QVEDGVLARTLADFQHSVPSTPQEKSEL 335
>gi|114657235|ref|XP_001171923.1| PREDICTED: GRINL1A upstream protein isoform 4 [Pan troglodytes]
Length = 407
Score = 33.8 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 345 ASASLRERIRHLDDMVH 361
>gi|311244667|ref|XP_003121532.1| PREDICTED: GRINL1A complex locus protein 1 [Sus scrofa]
Length = 520
Score = 33.4 bits (75), Expect = 9.7, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 48/146 (32%), Gaps = 26/146 (17%)
Query: 1 MSNRVSGSISCLNRRLFSMRLKVLYKESIALVEETSCYFDREGHLLSKTLPRAISK---- 56
M S +L + + E AL+EET+ + K IS
Sbjct: 207 MREMTRKLYSQYEEKLHEEQ-QRHSAEKEALLEETNNFLKAIEEANKKMQAAEISLEEKD 265
Query: 57 LYTSESVLLTTRLMQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL 116
E L R+ + L LQ + M+ E S+KE+
Sbjct: 266 QRIGELDRLIERMEKERHQLQLQLLEHETEMSAEITDSDKERY----------------- 308
Query: 117 PCFFKNLVERSSQLQRRIVLLDQEIY 142
+ L E S+ L+ RI LD ++
Sbjct: 309 ----QQLEEASASLRERIRHLDDMVH 330
>gi|70166414|ref|NP_001018100.1| GRINL1A combined protein isoform 1 [Homo sapiens]
gi|33668516|gb|AAO39707.1| GRINL1A complex protein 1 Gcom1 precursor [Homo sapiens]
Length = 550
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 345 ASASLRERIRHLDDMVH 361
>gi|291402937|ref|XP_002717753.1| PREDICTED: GRINL1A complex locus-like [Oryctolagus cuniculus]
Length = 466
Score = 33.4 bits (75), Expect = 9.9, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEK----IKFDYSGLDSTVPGWTELPCFFKNLVE 125
MQ ++ G + EKE+ ++ + + ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGEVIDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 345 ASASLRERIRHLDDMVH 361
>gi|114657229|ref|XP_001171995.1| PREDICTED: GRINL1A complex locus protein 1 isoform 7 [Pan
troglodytes]
Length = 550
Score = 33.4 bits (75), Expect = 9.9, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 70 MQMVSWLFLQRALEDGNMTLEQVMSEKEKIKFDYSGLDSTVPGWTEL----PCFFKNLVE 125
MQ ++ G + EKE+ + L+ EL ++ L E
Sbjct: 285 MQAAEISLEEKDQRIGELDRLIERMEKERHQLQLQLLEHETEMSGELTDSDKERYQQLEE 344
Query: 126 RSSQLQRRIVLLDQEIY 142
S+ L+ RI LD ++
Sbjct: 345 ASASLRERIRHLDDMVH 361
>gi|75674820|ref|YP_317241.1| pyridoxamine 5'-phosphate oxidase [Nitrobacter winogradskyi Nb-255]
gi|85701166|sp|Q3SV02|PDXH_NITWN RecName: Full=Pyridoxine/pyridoxamine 5'-phosphate oxidase;
AltName: Full=PNP/PMP oxidase; Short=PNPOx; AltName:
Full=Pyridoxal 5'-phosphate synthase
gi|74419690|gb|ABA03889.1| Pyridoxamine 5'-phosphate oxidase [Nitrobacter winogradskyi Nb-255]
Length = 213
Score = 33.4 bits (75), Expect = 10.0, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 23/68 (33%), Gaps = 1/68 (1%)
Query: 68 RLMQMVSWLFLQRALEDGNMTLEQV-MSEKEKIKFDYSGLDSTVPGWTELPCFFKNLVER 126
R Q+ +W Q + + EQ E K GW P F+ +R
Sbjct: 128 RQAQIGAWASRQSRPLESRLAFEQAIAKEAAKYAIGAVPRPPGWSGWRITPLQFEFWHDR 187
Query: 127 SSQLQRRI 134
+L RI
Sbjct: 188 PFRLHDRI 195
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.306 0.145 0.416
Lambda K H
0.267 0.0447 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,780,349,626
Number of Sequences: 14124377
Number of extensions: 71113428
Number of successful extensions: 302354
Number of sequences better than 10.0: 556
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 398
Number of HSP's that attempted gapping in prelim test: 301639
Number of HSP's gapped (non-prelim): 900
length of query: 170
length of database: 4,842,793,630
effective HSP length: 129
effective length of query: 41
effective length of database: 3,020,748,997
effective search space: 123850708877
effective search space used: 123850708877
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.9 bits)
S2: 76 (33.8 bits)