Query gi|254780652|ref|YP_003065065.1| Fructose-bisphosphate aldolase [Candidatus Liberibacter asiaticus str. psy62] Match_columns 339 No_of_seqs 143 out of 956 Neff 4.4 Searched_HMMs 23785 Date Tue May 31 17:54:11 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780652.hhm -d /home/congqian_1/database/pdb/pdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 2qap_A Fructose-1,6-bisphospha 100.0 0 0 1031.0 37.5 337 2-338 42-381 (391) 2 3mmt_A Fructose-bisphosphate a 100.0 0 0 1033.6 34.8 338 1-338 5-347 (347) 3 2pc4_A 41 kDa antigen, fructos 100.0 0 0 1030.7 33.8 337 2-338 19-358 (369) 4 3kx6_A Fructose-bisphosphate a 100.0 0 0 1023.1 35.9 336 2-337 31-369 (379) 5 3bv4_A Fructose-bisphosphate a 100.0 0 0 1004.5 35.9 330 2-331 9-341 (341) 6 3mbd_A Fructose-bisphosphate a 100.0 0 0 999.7 35.1 329 2-332 11-342 (342) 7 2iqt_A Fructose-bisphosphate a 100.0 0 0 748.0 21.4 276 10-325 10-294 (296) 8 3iv3_A Tagatose 1,6-diphosphat 97.5 0.0057 2.4E-07 38.5 17.6 259 14-301 20-292 (332) 9 1to3_A Putative aldolase YIHT; 95.5 0.15 6.2E-06 29.3 9.7 242 19-301 20-266 (304) 10 3fok_A Uncharacterized protein 54.3 11 0.00045 17.1 10.2 224 15-295 41-279 (307) 11 1jgt_A Beta-lactam synthetase; 51.4 12 0.0005 16.8 5.8 46 239-287 229-274 (513) 12 1y89_A DEVB protein; structura 48.5 5.7 0.00024 18.9 1.4 20 181-200 102-121 (238) 13 3ju2_A Uncharacterized protein 48.2 13 0.00056 16.5 6.6 111 63-181 34-148 (284) 14 2bkx_A Glucosamine-6-phosphate 38.8 18 0.00077 15.6 4.2 15 281-295 177-191 (242) 15 2fiq_A Putative tagatose 6-pho 34.5 21 0.0009 15.1 3.0 189 110-312 97-316 (420) 16 2kxe_A DNA polymerase II small 32.3 4.6 0.00019 19.5 -1.1 43 122-179 25-74 (75) 17 2jr2_A UPF0352 protein CPS_261 30.3 7.2 0.0003 18.2 -0.4 31 192-223 10-42 (76) 18 1fwx_A Nitrous oxide reductase 28.0 18 0.00075 15.6 1.3 26 253-278 384-409 (595) 19 1ct9_A Asparagine synthetase B 27.3 28 0.0012 14.3 4.3 32 231-262 206-237 (553) 20 1qni_A Nitrous-oxide reductase 25.7 19 0.00081 15.4 1.1 25 253-277 374-398 (581) 21 2juz_A UPF0352 protein HI0840; 25.3 24 0.001 14.8 1.5 26 192-217 10-37 (80) 22 1q15_A CARA; CMPR, (2S,5S)-5-c 25.3 31 0.0013 14.1 5.4 15 247-261 234-248 (503) 23 2jrx_A UPF0352 protein YEJL; h 24.1 23 0.00097 14.9 1.2 31 192-223 10-42 (83) 24 3hn6_A Glucosamine-6-phosphate 23.2 34 0.0014 13.8 5.2 19 253-271 218-236 (289) 25 3eb9_A 6-phosphogluconolactona 23.0 34 0.0014 13.8 4.2 17 253-269 212-228 (266) 26 3l23_A Sugar phosphate isomera 22.1 35 0.0015 13.7 7.0 93 82-178 64-165 (303) 27 3lrk_A Alpha-galactosidase 1; 22.0 35 0.0015 13.7 4.5 61 78-143 95-155 (479) 28 2p0y_A Hypothetical protein LP 20.7 29 0.0012 14.3 1.2 32 7-38 24-58 (341) 29 1fs5_A Glucosamine-6-phosphate 20.2 38 0.0016 13.5 5.5 20 252-271 196-215 (266) 30 1m7y_A ACC synthase, 1-aminocy 20.2 39 0.0016 13.5 3.9 62 116-183 175-236 (435) No 1 >2qap_A Fructose-1,6-bisphosphate aldolase; beta barrel, C-teminal tail, lyase; 1.59A {Leishmania mexicana} SCOP: c.1.10.1 PDB: 2qdg_A* 2qdh_A* 1epx_A 1f2j_A Probab=100.00 E-value=0 Score=1031.04 Aligned_cols=337 Identities=41% Similarity=0.675 Sum_probs=331.0 Q ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCHHEEEEEECCHHHHHHCCCCCCC Q ss_conf 47999999999747990999146887757878857899986788754564100778023046434677884100048874 Q gi|254780652|r 2 MQDLENSVAMMLQAGKGILAADESNATIQKRFKAIHLESTENSRRDYREMLFRAKDAMQYISSILLYEETLYQNAQDGTS 81 (339) Q Consensus 2 ~~eL~~~a~~~~~~gKGilAaDeS~gt~~Krl~~igventeenr~~~R~~l~tsp~~~~~IsGvILfeeTl~q~~~~g~~ 81 (339) -+||..||++|++|||||||||||+|||||||++|||||||||||+||+||||||+|++||||||||||||+|+++||++ T Consensus 42 ~~eL~~~a~~~~~~GKGiLAADES~gT~~Krl~~igventeenRr~yR~~Lftsp~~~~~IsGvILFEETl~q~~~dG~~ 121 (391) T 2qap_A 42 ESELIATVKKLTTPGKGLLAADESIGSCTKRFQPIGLSNTEEHRRQYRALMLEAEGFEQYISGVILHDETVGQKASNGQT 121 (391) T ss_dssp HHHHHHHHHHHTCTTCEEEEECCCTTTHHHHHGGGTCCCCHHHHHHHHHHHHTCTTGGGTEEEEEECHHHHTCBCTTSSB T ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHCEEEEECCHHHCCCCCCCCCC T ss_conf 99999999998069986997158887277778865999979999999987617986454557898036640772789982 Q ss_pred HHHHHHHCCCEEEEEECCCEEEC-CCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCEECCCCCCCCCHHHHHHHHHHHHH Q ss_conf 67989957987899427854217-89998621578357999999854339555010002336778740888899899999 Q gi|254780652|r 82 FVDLISSSGVLVGIKVDRGLKPY-PLYPGEHITVGLDDLDVRLKQYKDAGARVAKWRVVLSVSDVLPSMTVVKANMHILA 160 (339) Q Consensus 82 ~~~~l~~kGIvpgIKVDkGl~~l-~g~~~e~~t~GLD~L~eR~~~y~~~Ga~faKwRaVi~i~~~~Ps~~~I~~na~~la 160 (339) |+++|+++||||||||||||+|+ +|+++|++|+|||+|++||++||++|||||||||||+|++++||+.||.+|+++|| T Consensus 122 ~~~ll~~kGIvPgIKVDkGl~p~~~G~~~ek~t~GLD~L~~R~~ey~~~Ga~faKwRsVi~i~~~~Ps~~~I~~na~~La 201 (391) T 2qap_A 122 FPEYLTARGVVPGIKTDMGLCPLLEGAEGEQMTEGLDGYVKRASAYYKKGCRFCKWRNVYKIQNGTVSESAVRFNAETLA 201 (391) T ss_dssp HHHHHHHTTCEEEEECCCCEEECSSSSTTCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTBCCHHHHHHHHHHHH T ss_pred HHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHH T ss_conf 48999868982579717764667689986713777788999999999769853222232124568997899999999999 Q ss_pred HHHHHHHHCCCCCEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHH Q ss_conf 999999844787201101103775798999999999999999998763853111000025565764443-5898899877 Q gi|254780652|r 161 RYAVLCQNAGLVPIVEPEVLMEGDHTIERCAEVTEFVLRTLFNELYTMRVCFEGLVLKSNMILPGKSAP-QVSDEEIASN 239 (339) Q Consensus 161 rYA~i~Q~~GLVPIVEPEVl~dG~H~ie~~~~vte~vL~~lf~~L~~~~V~leg~lLKpnMv~pG~~~~-~~~~eevA~~ 239 (339) |||++||++||||||||||+|||+|++++|++||++||+++|++|.+|+|+|||+|||||||+||.+|+ ++++++||.+ T Consensus 202 ryA~i~Q~~GLVPIVEPEVlidg~h~ie~~~~vte~vL~~~~~~L~~~~V~leG~lLKpnMv~~G~~~~~~~~~~eva~~ 281 (391) T 2qap_A 202 RYAILSQMSGLVPIVEPEVMIDGKHDIDTCQRVSEHVWREVVAALQRHGVIWEGCLLKPNMVVPGAESGKTAAPEQVAHY 281 (391) T ss_dssp HHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEECCCCCCCCTTSSCCCCHHHHHHH T ss_pred HHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHH T ss_conf 99999998299764450220366655788999999999999999985577655742011332477532223786777677 Q ss_pred HHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCC-CCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH Q ss_conf 799985028743862586058888999999899986278-9980599851078637889881899889999999999999 Q gi|254780652|r 240 TIKIFKRVVPCAVQGIAFLSGGQSEQDATARLSAMNSMG-DCPWRLSFSYGRALQESVLRAWNGKQDNVVVAQRVLSHRA 318 (339) Q Consensus 240 T~~~l~~~vP~~VpgIvFLSGGqs~eeAt~~LnaiNk~~-~~pW~lsfSygRALQ~~~Lk~W~G~~eN~~~aQ~~~~~Ra 318 (339) |+.||++|||++||||||||||||++|||.|||+||+.. ..||.||||||||||+++|++|+||.+|+.+||++|++|| T Consensus 282 Tv~~l~~tVP~~VpgIvfLSGGqS~eeAt~~LnaiN~~~~~~pw~LsfSfgRALQ~s~lk~W~g~~~n~~~aQ~~~~~ra 361 (391) T 2qap_A 282 TVMTLARTMPAMLPGVMFLSGGLSEVQASEYLNAINNSPLPRPYFLSFSYARALQSSALKAWGGKESGLAAGRRAFLHRA 361 (391) T ss_dssp HHHHHHHHSBTTCCEEEECCTTCCHHHHHHHHHHHTTCCSCCCSEEEEEESHHHHHHHHHHHTTSGGGHHHHHHHHHHHH T ss_pred HHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHH T ss_conf 89998515787778688787987789999999998524678998589984276606899984887161899999999999 Q ss_pred HHHHHHHCCCCCCCCCCCCC Q ss_conf 74158978974867682125 Q gi|254780652|r 319 HMNSLATKGCWKKSLENSNG 338 (339) Q Consensus 319 k~ns~A~~G~y~~~~e~~~~ 338 (339) ++||+|++|+|+.++|++++ T Consensus 362 k~ns~A~~G~y~~~~~~~~~ 381 (391) T 2qap_A 362 RMNSMAQLGKYKRSDDDASS 381 (391) T ss_dssp HHHHHHHTTCCCGGGCC--- T ss_pred HHCCHHHCCCCCCCCCCCCC T ss_conf 85219867774799986566 No 2 >3mmt_A Fructose-bisphosphate aldolase; ssgcid, structural genomics, seattle structural GE center for infectious disease, hydrolase; HET: 2FP; 2.35A {Bartonella henselae} Probab=100.00 E-value=0 Score=1033.62 Aligned_cols=338 Identities=55% Similarity=0.902 Sum_probs=332.7 Q ss_pred CHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCC-CHHEEEEEECCHHHHHHCCCCC Q ss_conf 947999999999747990999146887757878857899986788754564100778-0230464346778841000488 Q gi|254780652|r 1 MMQDLENSVAMMLQAGKGILAADESNATIQKRFKAIHLESTENSRRDYREMLFRAKD-AMQYISSILLYEETLYQNAQDG 79 (339) Q Consensus 1 m~~eL~~~a~~~~~~gKGilAaDeS~gt~~Krl~~igventeenr~~~R~~l~tsp~-~~~~IsGvILfeeTl~q~~~~g 79 (339) |+++|.+||++|+++||||||||||+|||||||++|||||||||||+||+||||||. +++||||||||||||+|++++| T Consensus 5 ~~~~L~~~a~~~~~~GKGilAaDeS~gT~~Krl~~igventeenr~~~R~~l~tsp~~~~~~IsGvILfeeTl~q~~~~g 84 (347) T 3mmt_A 5 MNERLEDIALTLVGAGKGILAADESTATIGKRFESIGVECTEDNRRAYREMLFTAKEAMESAISGVILFDETLRQKASTG 84 (347) T ss_dssp HHHHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTCHHHHHHTEEEEEECHHHHTCBCTTS T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCCEEEEECCCHHHHCCCCCC T ss_conf 89999999999822898799835899847788987699985999999998771685476556648975523542235689 Q ss_pred CCHHHHHHHCCCEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCEECCCCC-CCCCHHHHHHHHHHH Q ss_conf 7467989957987899427854217899986215783579999998543395550100023367-787408888998999 Q gi|254780652|r 80 TSFVDLISSSGVLVGIKVDRGLKPYPLYPGEHITVGLDDLDVRLKQYKDAGARVAKWRVVLSVS-DVLPSMTVVKANMHI 158 (339) Q Consensus 80 ~~~~~~l~~kGIvpgIKVDkGl~~l~g~~~e~~t~GLD~L~eR~~~y~~~Ga~faKwRaVi~i~-~~~Ps~~~I~~na~~ 158 (339) ++|+++|.++|||||||||||++|++|+++|++|+|||||++||++||++|||||||||||+|+ ++.||+.||.+|+++ T Consensus 85 ~~~~~ll~~kGIvPgIKVDkGl~~l~~~~ge~~t~gLd~L~~rl~~y~~~Ga~faKwRsVi~i~~~~~Ps~~~I~~na~~ 164 (347) T 3mmt_A 85 QMLTDLIRDAGAVPGIKVDTGAKPLAAFPQETITEGLDGLRERLKDYYTLGARFAKWRAVIAIDAQTLPTRGAISQNAQA 164 (347) T ss_dssp SBHHHHHHHTTCEEEEECCCCEEECTTSTTCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCCSSSCSCHHHHHHHHHH T ss_pred CCHHHHHHHCCCEEEEECCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH T ss_conf 87567998479801253699877878999776136713799999999975875210157776067789978999999999 Q ss_pred HHHHHHHHHHCCCCCEECHHHCCCC---CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH Q ss_conf 9999999984478720110110377---5798999999999999999998763853111000025565764443589889 Q gi|254780652|r 159 LARYAVLCQNAGLVPIVEPEVLMEG---DHTIERCAEVTEFVLRTLFNELYTMRVCFEGLVLKSNMILPGKSAPQVSDEE 235 (339) Q Consensus 159 larYA~i~Q~~GLVPIVEPEVl~dG---~H~ie~~~~vte~vL~~lf~~L~~~~V~leg~lLKpnMv~pG~~~~~~~~ee 235 (339) |||||++||++||||||||||+||| +|+|++|++||++||..+|++|.+|+|+|||+|||||||+||++|+++++++ T Consensus 165 laryA~i~q~~GLVPIVEPEVlidg~~k~h~ie~~~~vt~~vL~~~~~~l~~~~V~leg~lLKpnmv~pG~~~~~~~~~e 244 (347) T 3mmt_A 165 LARYAALCQEAGLVPIVEPEVLMDGPSRQHSITRCFEVTKVVLHTVFKELFEARVLFEGMILKPNMVIDGKDARIASVEE 244 (347) T ss_dssp HHHHHHHHHHHTCEEEEEEEECSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCSCCCTTSCCCCHHH T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHH T ss_conf 99999999984973430662557898654678999999999999999999872223468652004522785444289899 Q ss_pred HHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHH Q ss_conf 98777999850287438625860588889999998999862789980599851078637889881899889999999999 Q gi|254780652|r 236 IASNTIKIFKRVVPCAVQGIAFLSGGQSEQDATARLSAMNSMGDCPWRLSFSYGRALQESVLRAWNGKQDNVVVAQRVLS 315 (339) Q Consensus 236 vA~~T~~~l~~~vP~~VpgIvFLSGGqs~eeAt~~LnaiNk~~~~pW~lsfSygRALQ~~~Lk~W~G~~eN~~~aQ~~~~ 315 (339) ||++|++||+++||++||||||||||||++|||.|||+||++..+||.||||||||||+++|++|+||++|+.+||++|+ T Consensus 245 vA~~Tv~~l~~tvP~~VpgIvfLSGGqS~eeAt~~Lna~n~~~~~pW~lsFSfgRALQ~s~L~~W~G~~eNv~~aQ~~~~ 324 (347) T 3mmt_A 245 VAEKTVHVLKQTVPAAVPGIAFLSGGQTDEEATAHLSAMNALGALPWKLTFSYGRALQAAALKAWAGKNENIVVAQKAFC 324 (347) T ss_dssp HHHHHHHHHHHHSCTTSCEEEECCTTCCHHHHHHHHHHHTTSCCCSSEEEEEESHHHHHHHHHHHTTCGGGHHHHHHHHH T ss_pred HHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHH T ss_conf 98998988873489898868874798888999999998647999987246630798738999985797464999999999 Q ss_pred HHHHHHHHHHCCCCCCCCCCCCC Q ss_conf 99974158978974867682125 Q gi|254780652|r 316 HRAHMNSLATKGCWKKSLENSNG 338 (339) Q Consensus 316 ~Rak~ns~A~~G~y~~~~e~~~~ 338 (339) +||++||+|++|+|+.++|+++| T Consensus 325 ~rak~ns~A~~G~y~~~~e~~~a 347 (347) T 3mmt_A 325 HRARMNHLAALGQWTKDQEKSCA 347 (347) T ss_dssp HHHHHHHHHHTTCCCGGGC---- T ss_pred HHHHHHHHHHCCCCCCCCCCCCC T ss_conf 99986169866887822265569 No 3 >2pc4_A 41 kDa antigen, fructose-bisphosphate aldolase; invasion machinery, structural genomics, PSI, protein structure initiative; 2.40A {Plasmodium falciparum} PDB: 2eph_A 1a5c_A Probab=100.00 E-value=0 Score=1030.75 Aligned_cols=337 Identities=45% Similarity=0.743 Sum_probs=332.1 Q ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCHHEEEEEECCHHHHHHCCCCCCC Q ss_conf 47999999999747990999146887757878857899986788754564100778023046434677884100048874 Q gi|254780652|r 2 MQDLENSVAMMLQAGKGILAADESNATIQKRFKAIHLESTENSRRDYREMLFRAKDAMQYISSILLYEETLYQNAQDGTS 81 (339) Q Consensus 2 ~~eL~~~a~~~~~~gKGilAaDeS~gt~~Krl~~igventeenr~~~R~~l~tsp~~~~~IsGvILfeeTl~q~~~~g~~ 81 (339) .+||.+||++|+++||||||||||+|||||||+.|||||||||||+||+||||||+|++||||||||||||+|+++||++ T Consensus 19 ~~eL~~~a~~~~~~GKGilAaDES~gT~~Krl~~igventeenRr~yR~~lfttp~~~~~IsGvILFeeTl~q~~~~g~~ 98 (369) T 2pc4_A 19 AEELATTAQKLVQAGKGILAADESTQTIKKRFDNIKLENTIENRASYRDLLFGTKGLGKFISGAILFEETLFQKNEAGVP 98 (369) T ss_dssp HHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTCTTCTTTEEEEEECHHHHTCBCTTSCB T ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHCEEEEECCHHHHHHHCCCCCC T ss_conf 99999999998059987998258898377789866999857889999886117976453457897658886003249987 Q ss_pred HHHHHHHCCCEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCEECCCCC--CCCCHHHHHHHHHHHH Q ss_conf 67989957987899427854217899986215783579999998543395550100023367--7874088889989999 Q gi|254780652|r 82 FVDLISSSGVLVGIKVDRGLKPYPLYPGEHITVGLDDLDVRLKQYKDAGARVAKWRVVLSVS--DVLPSMTVVKANMHIL 159 (339) Q Consensus 82 ~~~~l~~kGIvpgIKVDkGl~~l~g~~~e~~t~GLD~L~eR~~~y~~~Ga~faKwRaVi~i~--~~~Ps~~~I~~na~~l 159 (339) |+++|+++|||||||||||++|++|.++|++|+|||||++||++||++|||||||||||+|+ +++||+.||.+|+++| T Consensus 99 ~~~ll~~kGIvPgIKVDkGl~~l~~~~ge~~t~gLdgL~~rl~~y~~~Ga~FaKwRsVi~i~~~~g~PS~~~I~~na~~L 178 (369) T 2pc4_A 99 MVNLLHNENIIPGIKVDKGLVNIPCTDEEKSTQGLDGLAERCKEYYKAGARFAKWRTVLVIDTAKGKPTDLSIHETAWGL 178 (369) T ss_dssp HHHHHHHHTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHHTCCEEEEEEEECCBGGGTBSCHHHHHHHHHHH T ss_pred HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHH T ss_conf 24799857981379828986158999811035784159999999998697452267899843667999889999999999 Q ss_pred HHHHHHHHHCCCCCEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHH Q ss_conf 9999999844787201101103775798999999999999999998763853111000025565764443-589889987 Q gi|254780652|r 160 ARYAVLCQNAGLVPIVEPEVLMEGDHTIERCAEVTEFVLRTLFNELYTMRVCFEGLVLKSNMILPGKSAP-QVSDEEIAS 238 (339) Q Consensus 160 arYA~i~Q~~GLVPIVEPEVl~dG~H~ie~~~~vte~vL~~lf~~L~~~~V~leg~lLKpnMv~pG~~~~-~~~~eevA~ 238 (339) ||||+|||++||||||||||+|||+|++|+|++||++||+.||++|.+|+|+|+|+|||||||+||.+|+ ++++++||+ T Consensus 179 aryA~i~q~~GLVPIVEPEVlidg~h~ie~~~~vt~~vL~~l~~~l~~~~V~LegtlLKpnmv~~G~~~~~~~~~~~vA~ 258 (369) T 2pc4_A 179 ARYASICQQNRLVPIVEPEILADGPHSIEVCAVVTQKVLSCVFKALQENGVLLEGALLKPNMVTAGYECTAKTTTQDVGF 258 (369) T ss_dssp HHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSSCCCHHHHHH T ss_pred HHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH T ss_conf 99999999759740035304316875368899999999999998776447544684423134687543544389888878 Q ss_pred HHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH Q ss_conf 77999850287438625860588889999998999862789980599851078637889881899889999999999999 Q gi|254780652|r 239 NTIKIFKRVVPCAVQGIAFLSGGQSEQDATARLSAMNSMGDCPWRLSFSYGRALQESVLRAWNGKQDNVVVAQRVLSHRA 318 (339) Q Consensus 239 ~T~~~l~~~vP~~VpgIvFLSGGqs~eeAt~~LnaiNk~~~~pW~lsfSygRALQ~~~Lk~W~G~~eN~~~aQ~~~~~Ra 318 (339) +|++||+++|||+||||||||||||++|||.|||+||++++.||.||||||||||+++|++|+||++|+.+||++|++|| T Consensus 259 ~Tv~~l~~~vPp~VpgIvfLSGGqS~eeAt~~LnaiN~~~~~pw~lsfSfgRALQ~s~Lk~W~g~~en~~~aQ~~~~~ra 338 (369) T 2pc4_A 259 LTVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALGPHPWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRA 338 (369) T ss_dssp HHHHHHHHHCCTTSCEEEECCTTCCHHHHHHHHHHHHHTCCCSSEEEEEESHHHHHHHHHTTTTCTTTHHHHHHHHHHHH T ss_pred HHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHH T ss_conf 99999984389889868878898878999999998611689998799972186607899984797664999999999999 Q ss_pred HHHHHHHCCCCCCCCCCCCC Q ss_conf 74158978974867682125 Q gi|254780652|r 319 HMNSLATKGCWKKSLENSNG 338 (339) Q Consensus 319 k~ns~A~~G~y~~~~e~~~~ 338 (339) ++||+|++|+|..++|.+++ T Consensus 339 ~~ns~A~~G~y~~~~e~~~~ 358 (369) T 2pc4_A 339 EANSLATYGKYKGGAGGENA 358 (369) T ss_dssp HHHHHHHHTCCCCCCC---- T ss_pred HHHHHHHCCCCCCCCCCCCC T ss_conf 86059865855798887655 No 4 >3kx6_A Fructose-bisphosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, glycolysis, lyase, structural genomics; HET: CIT; 2.10A {Babesia bovis} Probab=100.00 E-value=0 Score=1023.10 Aligned_cols=336 Identities=48% Similarity=0.759 Sum_probs=330.3 Q ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCHHEEEEEECCHHHHHHCCCCCCC Q ss_conf 47999999999747990999146887757878857899986788754564100778023046434677884100048874 Q gi|254780652|r 2 MQDLENSVAMMLQAGKGILAADESNATIQKRFKAIHLESTENSRRDYREMLFRAKDAMQYISSILLYEETLYQNAQDGTS 81 (339) Q Consensus 2 ~~eL~~~a~~~~~~gKGilAaDeS~gt~~Krl~~igventeenr~~~R~~l~tsp~~~~~IsGvILfeeTl~q~~~~g~~ 81 (339) .+||.+||++|++|||||||||||+|||||||++|||||||||||+||+||||||+|++||||||||||||+|+++||++ T Consensus 31 ~~eL~~~a~~i~~~GKGIlAaDES~gT~~Krl~~igventeenRr~yR~~Lftsp~~~~~IsGaILFeeTl~q~~~~g~~ 110 (379) T 3kx6_A 31 AKELAENASFIASPGKGILAADESTGTIQKRFDNVGVENTEKNRAEYRSILFTTKGLGKYISGCILFEETLFQQAPNGQN 110 (379) T ss_dssp HHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTCTTGGGTEEEEEECHHHHTCBCTTSCB T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHCEEEEECCHHHHHCCCCCCCC T ss_conf 99999999998179984888358887166679865999866889999886317976454457897458876232369977 Q ss_pred HHHHHHHCCCEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCEECCCCC--CCCCHHHHHHHHHHHH Q ss_conf 67989957987899427854217899986215783579999998543395550100023367--7874088889989999 Q gi|254780652|r 82 FVDLISSSGVLVGIKVDRGLKPYPLYPGEHITVGLDDLDVRLKQYKDAGARVAKWRVVLSVS--DVLPSMTVVKANMHIL 159 (339) Q Consensus 82 ~~~~l~~kGIvpgIKVDkGl~~l~g~~~e~~t~GLD~L~eR~~~y~~~Ga~faKwRaVi~i~--~~~Ps~~~I~~na~~l 159 (339) |+++|+++|||||||||||++|+++.++|++|+|||||++||++||++|||||||||||+|+ +++||+.+|.+|+++| T Consensus 111 ~~~ll~~kGIVPgIKVDkGl~~l~~~~~e~~t~gLDgL~eRl~~y~~~Ga~faKwRsVi~i~~~~~~ps~~~I~~na~~l 190 (379) T 3kx6_A 111 MVDLLRAEGILPGIKVDKGLVTIPNTDEEVSTTGLDGLAERCQKYYNAGARFAKWRAVLSIDVKKNKPSNLSILETAHTL 190 (379) T ss_dssp HHHHHHHHTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTTTBSCHHHHHHHHHHH T ss_pred HHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHH T ss_conf 79999837976889846886558999721045781459999999997699623333368616778999989999999999 Q ss_pred HHHHHHHHHCCCCCEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHH Q ss_conf 9999999844787201101103775798999999999999999998763853111000025565764443-589889987 Q gi|254780652|r 160 ARYAVLCQNAGLVPIVEPEVLMEGDHTIERCAEVTEFVLRTLFNELYTMRVCFEGLVLKSNMILPGKSAP-QVSDEEIAS 238 (339) Q Consensus 160 arYA~i~Q~~GLVPIVEPEVl~dG~H~ie~~~~vte~vL~~lf~~L~~~~V~leg~lLKpnMv~pG~~~~-~~~~eevA~ 238 (339) ||||++||++||||||||||+|||+|++++|++||++||+.||++|.+|+|+|+|+|||||||+||.+|. ++++++||+ T Consensus 191 aryA~i~q~~GLVPIVEPEVlidg~h~ie~~~~vt~~vl~~l~~~l~~~~V~LegtlLKpnMv~~G~~~~~~~~~e~va~ 270 (379) T 3kx6_A 191 ARYAAICQENGLVPIVEPEILADGDHSIEVCAEVTERVLAAVFKALNDHKVLLEGALLKPNMVTQGVDCKDKPAPQTVGF 270 (379) T ss_dssp HHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSCCCCHHHHHH T ss_pred HHHHHHHHHCCCCCEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH T ss_conf 99999999739874004011057986599999999999999998765414555574404577667632233378677767 Q ss_pred HHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH Q ss_conf 77999850287438625860588889999998999862789980599851078637889881899889999999999999 Q gi|254780652|r 239 NTIKIFKRVVPCAVQGIAFLSGGQSEQDATARLSAMNSMGDCPWRLSFSYGRALQESVLRAWNGKQDNVVVAQRVLSHRA 318 (339) Q Consensus 239 ~T~~~l~~~vP~~VpgIvFLSGGqs~eeAt~~LnaiNk~~~~pW~lsfSygRALQ~~~Lk~W~G~~eN~~~aQ~~~~~Ra 318 (339) +|++||+++|||+||||||||||||++|||.|||+|||+++.||.||||||||||+|+|++|+||++|+++||++|++|| T Consensus 271 ~T~~~l~~~vPp~VpgIvfLSGGqS~eeAt~~LnaiNk~~~~pw~LsfSfsRALQ~s~lk~W~g~~~n~~~aq~~~~~ra 350 (379) T 3kx6_A 271 LTSRALRRTVPPALPGVMFLSGGQSESMATRHLNEINKCNKHPWSLSFSYGRALQSSVLKTWNGSMSNAAAAQDVLMKLA 350 (379) T ss_dssp HHHHHHHTTCCTTSCEEEECCTTCCHHHHHHHHHHHHHTCCCSSEEEEEESHHHHHHHHHHHTTCGGGHHHHHHHHHHHH T ss_pred HHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH T ss_conf 67999975379788869982698788999999999842789997699960796606899985788142999999999999 Q ss_pred HHHHHHHCCCCCCCCCCCC Q ss_conf 7415897897486768212 Q gi|254780652|r 319 HMNSLATKGCWKKSLENSN 337 (339) Q Consensus 319 k~ns~A~~G~y~~~~e~~~ 337 (339) ++||+|++|+|+.++|.+. T Consensus 351 ~~n~~A~~G~y~~~~~~~~ 369 (379) T 3kx6_A 351 QQNSEASLGSLKTDLSDDG 369 (379) T ss_dssp HHHHHHTTTCCC------- T ss_pred HHHHHHHCCCCCCCCCCCC T ss_conf 8625976786688777665 No 5 >3bv4_A Fructose-bisphosphate aldolase A; lyase, acetylation, glycolysis, phosphoprotein, schiff base; HET: 13P; 1.70A {Oryctolagus cuniculus} PDB: 1ado_A* 1ewd_A 1zai_A* 1zah_A* 1zaj_A* 1zal_A 2ot0_A 2ot1_A* 2qut_A 2quv_A 3lge_A 3b8d_A 6ald_A* 1ex5_A 1ewe_A 2quu_A 3dfn_A 3dfo_A 3dfp_A 3dfq_A ... Probab=100.00 E-value=0 Score=1004.55 Aligned_cols=330 Identities=47% Similarity=0.762 Sum_probs=324.8 Q ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCC-HHEEEEEECCHHHHHHCCCCCC Q ss_conf 479999999997479909991468877578788578999867887545641007780-2304643467788410004887 Q gi|254780652|r 2 MQDLENSVAMMLQAGKGILAADESNATIQKRFKAIHLESTENSRRDYREMLFRAKDA-MQYISSILLYEETLYQNAQDGT 80 (339) Q Consensus 2 ~~eL~~~a~~~~~~gKGilAaDeS~gt~~Krl~~igventeenr~~~R~~l~tsp~~-~~~IsGvILfeeTl~q~~~~g~ 80 (339) .+||.+||++|+++||||||||||+|||||||+.|||||||||||.||+||||||+| ++||||||||||||+|+++||+ T Consensus 9 ~~eL~~~a~~~~~~GKGilAADeS~gT~~Krl~~igventeenr~~~R~~l~tsp~f~~~~IsGaILfeeTl~q~~~~g~ 88 (341) T 3bv4_A 9 KKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGR 88 (341) T ss_dssp HHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTCCGGGTTTEEEEEECHHHHTCBCTTSC T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHCCCCCCCC T ss_conf 99999999998148986998268998467789876999967889999998703860002535789763887601135996 Q ss_pred CHHHHHHHCCCEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCEECCCCCCCCCHHHHHHHHHHHHH Q ss_conf 46798995798789942785421789998621578357999999854339555010002336778740888899899999 Q gi|254780652|r 81 SFVDLISSSGVLVGIKVDRGLKPYPLYPGEHITVGLDDLDVRLKQYKDAGARVAKWRVVLSVSDVLPSMTVVKANMHILA 160 (339) Q Consensus 81 ~~~~~l~~kGIvpgIKVDkGl~~l~g~~~e~~t~GLD~L~eR~~~y~~~Ga~faKwRaVi~i~~~~Ps~~~I~~na~~la 160 (339) +|+++|.++||||||||||||+|+++.+||++|+|||||.+||++||++|||||||||||+|+++.||+.+|.+|+++|| T Consensus 89 ~~~~ll~~kGIvPgIKVDkGl~~l~~~~ge~~t~gld~L~~rl~~y~~~Ga~faKwRaVi~i~~~~ps~~~I~~n~~~la 168 (341) T 3bv4_A 89 PFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLVGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLA 168 (341) T ss_dssp BHHHHHHTTTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTBSCHHHHHHHHHHHH T ss_pred CHHHHHHHCCCCCCEECCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH T ss_conf 56999996798552436887645567898760478322999999999759963543121355778997899999999999 Q ss_pred HHHHHHHHCCCCCEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHH Q ss_conf 999999844787201101103775798999999999999999998763853111000025565764443-5898899877 Q gi|254780652|r 161 RYAVLCQNAGLVPIVEPEVLMEGDHTIERCAEVTEFVLRTLFNELYTMRVCFEGLVLKSNMILPGKSAP-QVSDEEIASN 239 (339) Q Consensus 161 rYA~i~Q~~GLVPIVEPEVl~dG~H~ie~~~~vte~vL~~lf~~L~~~~V~leg~lLKpnMv~pG~~~~-~~~~eevA~~ 239 (339) |||++||++||||||||||+|||+|++|+|++||++||+.||++|.+|+|+|||+|||||||+||.+|. ++++++||++ T Consensus 169 ryA~i~q~~GLVPIVEPEVlidg~h~~e~~~~vt~~vl~~l~~~l~~~~V~leg~lLKp~mv~~g~~~~~~~~~~~va~~ 248 (341) T 3bv4_A 169 RYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKYSHEEIAMA 248 (341) T ss_dssp HHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSSCCCHHHHHHH T ss_pred HHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHCCC T ss_conf 99999986497723310220158876789999999999999988875011245756401454577533221785653331 Q ss_pred HHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCC-CCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH Q ss_conf 799985028743862586058888999999899986278-9980599851078637889881899889999999999999 Q gi|254780652|r 240 TIKIFKRVVPCAVQGIAFLSGGQSEQDATARLSAMNSMG-DCPWRLSFSYGRALQESVLRAWNGKQDNVVVAQRVLSHRA 318 (339) Q Consensus 240 T~~~l~~~vP~~VpgIvFLSGGqs~eeAt~~LnaiNk~~-~~pW~lsfSygRALQ~~~Lk~W~G~~eN~~~aQ~~~~~Ra 318 (339) |++||+++||++||||||||||||++|||.||||||+++ ..||.||||||||||+++|++|+||.+|+.+||++|++|| T Consensus 249 t~~~l~~~vp~~VpgIvfLSGGqS~eeAt~~Lna~Nk~~~~~pw~lsfSfsRALQ~~~L~~W~g~~eNv~~aQ~~~~~ra 328 (341) T 3bv4_A 249 TVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRA 328 (341) T ss_dssp HHHHHHTTSCTTSCEEEECCTTCCHHHHHHHHHHHHHCCSCCCSEEEEEESHHHHHHHHHHHTTCGGGHHHHHHHHHHHH T ss_pred CHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH T ss_conf 23233104898889688787998889999999987236788998689960596637899984788044999999999999 Q ss_pred HHHHHHHCCCCCC Q ss_conf 7415897897486 Q gi|254780652|r 319 HMNSLATKGCWKK 331 (339) Q Consensus 319 k~ns~A~~G~y~~ 331 (339) ++||+|++|+|+. T Consensus 329 ~~ns~A~~G~y~~ 341 (341) T 3bv4_A 329 LANSLACQGKYTS 341 (341) T ss_dssp HHHHHHTTTCCCC T ss_pred HHHHHHHCCCCCC T ss_conf 8606986496279 No 6 >3mbd_A Fructose-bisphosphate aldolase; glycolysis, lyase, schiff base, structural genomics; 2.00A {Encephalitozoon cuniculi} PDB: 3mbf_A* Probab=100.00 E-value=0 Score=999.66 Aligned_cols=329 Identities=38% Similarity=0.679 Sum_probs=322.5 Q ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCHHEEEEEECCHHHHHHCCCCCCC Q ss_conf 47999999999747990999146887757878857899986788754564100778023046434677884100048874 Q gi|254780652|r 2 MQDLENSVAMMLQAGKGILAADESNATIQKRFKAIHLESTENSRRDYREMLFRAKDAMQYISSILLYEETLYQNAQDGTS 81 (339) Q Consensus 2 ~~eL~~~a~~~~~~gKGilAaDeS~gt~~Krl~~igventeenr~~~R~~l~tsp~~~~~IsGvILfeeTl~q~~~~g~~ 81 (339) +.+|..||++|+++||||||||||+|||||||++|||||||||||.||+||||+|++++||||||||||||||++++|++ T Consensus 11 ~~~l~~tA~~~~~~GKGilAaDeS~gT~~Krl~~~gventeenr~~~R~~l~t~p~~~~~IsGaILfeeTl~q~~~~g~~ 90 (342) T 3mbd_A 11 LLRLGMTAKKILENGKGILAADETPKTLGRRFEKLGITNTEENRRKFREILFSTKGIERYIGGVILNQETFEQTSGSGVP 90 (342) T ss_dssp HHHHHHHHHHHHGGGCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTCTTGGGTEEEEEECGGGGGCBCTTSCB T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHCEEEEECCHHHHHHHCCCCCC T ss_conf 99999999998527987998268998577889876999977899999986438864331557897769987111237997 Q ss_pred HHHHHHHCCCEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCEECCCCCCCCCHHHHHHHHHHHHHH Q ss_conf 67989957987899427854217899986215783579999998543395550100023367787408888998999999 Q gi|254780652|r 82 FVDLISSSGVLVGIKVDRGLKPYPLYPGEHITVGLDDLDVRLKQYKDAGARVAKWRVVLSVSDVLPSMTVVKANMHILAR 161 (339) Q Consensus 82 ~~~~l~~kGIvpgIKVDkGl~~l~g~~~e~~t~GLD~L~eR~~~y~~~Ga~faKwRaVi~i~~~~Ps~~~I~~na~~lar 161 (339) |+++|+++|||||||||||+.|+. ++|++|+|||||++||++||++|||||||||||+|++++||+.+|.+|+++||| T Consensus 91 ~~~ll~~kGIvPgIKVDkGl~~~~--~ge~~t~gld~L~~rl~~y~~~Ga~faKwRsVi~i~~~~ps~~~I~~n~~~lar 168 (342) T 3mbd_A 91 LTELLKKKGIEIGIKLDKGLIDYK--EKEKISVGLEDLDLRCKSSAFKDATFAKWRSLFYFYDGIPSEDCINENCSILAK 168 (342) T ss_dssp HHHHHHHTTCEEEEECCCCEEEET--TTEEEECCGGGHHHHHTCGGGTTCCEEEEEEEECCBTTBSCHHHHHHHHHHHHH T ss_pred HHHHHHHCCCCEEEECCCCCCCCC--CCCEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH T ss_conf 689997367610164456755787--766006786579999999997598645540346526778778999999999999 Q ss_pred HHHHHHHCCCCCEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHH Q ss_conf 99999844787201101103775798999999999999999998763853111000025565764443-58988998777 Q gi|254780652|r 162 YAVLCQNAGLVPIVEPEVLMEGDHTIERCAEVTEFVLRTLFNELYTMRVCFEGLVLKSNMILPGKSAP-QVSDEEIASNT 240 (339) Q Consensus 162 YA~i~Q~~GLVPIVEPEVl~dG~H~ie~~~~vte~vL~~lf~~L~~~~V~leg~lLKpnMv~pG~~~~-~~~~eevA~~T 240 (339) ||+|||++||||||||||+|||+|++++|++||++||+++|++|.+|+|+|||+|||||||+||.+|+ ++++++||.+| T Consensus 169 yA~i~q~~GLVPIVEPEVlidg~h~~e~~~~vte~vl~~~~~~l~~~~v~leg~lLKp~Mv~pG~~~~~~~~~e~va~~T 248 (342) T 3mbd_A 169 YAIICQKNGLVPIVEPEVFLEGDYSMKRSYEVTRQILSTLMKYLNYELVYIPGVLIKASYVTSGQLSNEKYTPKKVATFT 248 (342) T ss_dssp HHHHHHHTTCEEEEEEEECSSSCCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEECCCCCCTTSCCCCCHHHHHHHH T ss_pred HHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHH T ss_conf 99999980940342401103688327788899999999999999872045557664344302775444548978875677 Q ss_pred HHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCC-CCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH Q ss_conf 99985028743862586058888999999899986278-99805998510786378898818998899999999999997 Q gi|254780652|r 241 IKIFKRVVPCAVQGIAFLSGGQSEQDATARLSAMNSMG-DCPWRLSFSYGRALQESVLRAWNGKQDNVVVAQRVLSHRAH 319 (339) Q Consensus 241 ~~~l~~~vP~~VpgIvFLSGGqs~eeAt~~LnaiNk~~-~~pW~lsfSygRALQ~~~Lk~W~G~~eN~~~aQ~~~~~Rak 319 (339) ++||+++|||+||||||||||||++|||.||||||+.. ..||.||||||||||+++|++|+|+++|+.+||++|++||+ T Consensus 249 v~~l~~~vpp~VpgIvfLSGGqS~eeAt~~LnaiN~~~~~~pw~lsfSfsRALq~s~Lk~W~g~~eNv~aaQ~~~~~ra~ 328 (342) T 3mbd_A 249 LRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARALTDGVLETWRGDDSNIEEAQKILLETSF 328 (342) T ss_dssp HHHHHHHCCTTCCEEEECCTTSCHHHHHHHHHHHHHCCCCCSSEEEEEESHHHHHHHHHHHTTCGGGHHHHHHHHHHHHH T ss_pred HHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH T ss_conf 88998518988996898049878899999999873445689986898628977389999865988889999999999999 Q ss_pred HHHHHHCCC-CCCC Q ss_conf 415897897-4867 Q gi|254780652|r 320 MNSLATKGC-WKKS 332 (339) Q Consensus 320 ~ns~A~~G~-y~~~ 332 (339) +||+|++|+ |+.+ T Consensus 329 ~ns~A~~Gklw~~~ 342 (342) T 3mbd_A 329 KACRGAEGKLWDQE 342 (342) T ss_dssp HHHHHHTTCTTCC- T ss_pred HHHHHHCCCCCCCC T ss_conf 71797668987779 No 7 >2iqt_A Fructose-bisphosphate aldolase class 1; TIM berrel, structural genomics, PSI-2, protein structure initiative; 2.46A {Porphyromonas gingivalis W83} Probab=100.00 E-value=0 Score=748.01 Aligned_cols=276 Identities=21% Similarity=0.181 Sum_probs=246.1 Q ss_pred HHHHHCCCEEEEECCCCCCHHHHHHHCCCC----CCHHH----HHHHHHHHEECCCC-HHEEEEEECCHHHHHHCCCCCC Q ss_conf 999747990999146887757878857899----98678----87545641007780-2304643467788410004887 Q gi|254780652|r 10 AMMLQAGKGILAADESNATIQKRFKAIHLE----STENS----RRDYREMLFRAKDA-MQYISSILLYEETLYQNAQDGT 80 (339) Q Consensus 10 ~~~~~~gKGilAaDeS~gt~~Krl~~igve----nteen----r~~~R~~l~tsp~~-~~~IsGvILfeeTl~q~~~~g~ 80 (339) ++|...++||||+|||+|||||||++|||| |+||| ||+||+||||||+| ++||||||||||||+|++++|. T Consensus 10 ~~~~~~~gfIlA~DeS~gt~~Krl~~~Gve~~~~~~eee~~~~~~~~R~~l~tsp~~~~~~IsGvILfeETl~q~~~~~~ 89 (296) T 2iqt_A 10 QQMRQAPGFVGALDQSGGSTPKALKAYGIQPDAYQSEEEMFDLIHQMRTRMITSPAFATGKIIGVILFERTMRGKIEGMP 89 (296) T ss_dssp HHHHHCCSEEEEECCCGGGHHHHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHSGGGGSSSEEEEEECHHHHTSEETTEE T ss_pred HHHHCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHCCCCCCCC T ss_conf 99854898389841788834778998499986456677889999999999822864023542234355776335068996 Q ss_pred CHHHHHHHCCCEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCEECCCCCCCCCHHHHHHHHHHHHH Q ss_conf 46798995798789942785421789998621578357999999854339555010002336778740888899899999 Q gi|254780652|r 81 SFVDLISSSGVLVGIKVDRGLKPYPLYPGEHITVGLDDLDVRLKQYKDAGARVAKWRVVLSVSDVLPSMTVVKANMHILA 160 (339) Q Consensus 81 ~~~~~l~~kGIvpgIKVDkGl~~l~g~~~e~~t~GLD~L~eR~~~y~~~Ga~faKwRaVi~i~~~~Ps~~~I~~na~~la 160 (339) +|+++|+++|||||||||||++|++ ++|++|+|||||++||++|++.|||||||||||+| ||+.+|.+|+++|| T Consensus 90 ~~~~ll~~kGIvPgIKVDkGl~~l~--~ge~~t~gldgL~~r~~~y~~~ga~faKWRaVi~i----ps~~~I~~na~~la 163 (296) T 2iqt_A 90 TADFLWEKRHIVPFLKVDKGLQDEA--NGVQLMKPFPELGKLCEEAVGYHVFGTKMRSVIKQ----ANEQGIRDIVEQQF 163 (296) T ss_dssp HHHHHHHHHCCEEEEECCCCBCCCB--TTEECBCCCTTHHHHHHHHHHTTCCEEEEEEEECS----CCHHHHHHHHHHHH T ss_pred CHHHHHHCCCCCCEEECCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCC----CCCCCHHHHHHHHH T ss_conf 4899997179750132577755688--98754447232999999999815773412200047----87414599999999 Q ss_pred HHHHHHHHCCCCCEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH Q ss_conf 99999984478720110110377579899999999999999999876385311100002556576444358988998777 Q gi|254780652|r 161 RYAVLCQNAGLVPIVEPEVLMEGDHTIERCAEVTEFVLRTLFNELYTMRVCFEGLVLKSNMILPGKSAPQVSDEEIASNT 240 (339) Q Consensus 161 rYA~i~Q~~GLVPIVEPEVl~dG~H~ie~~~~vte~vL~~lf~~L~~~~V~leg~lLKpnMv~pG~~~~~~~~eevA~~T 240 (339) |||++||++||||||||||+|||+|++|.|+.++++++..+. ++++|+|||||||++|..+. T Consensus 164 rYA~i~Q~~GLVPIVEPEVlidg~h~~e~~~~~~~~~l~~~~-------~l~eg~lLK~~mp~~~~~~~----------- 225 (296) T 2iqt_A 164 QWGKEILSHGLVPILEPEVDIHCPEKAKAEEILKRELLAQLD-------KMTEPVMLKITIPTVDNFYK----------- 225 (296) T ss_dssp HHHHHHHTTTCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHH-------HCSSCEEEEEECCSSTTTTH----------- T ss_pred HHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHH-------HHCCCCEEEEECCCCCCCCC----------- T ss_conf 999999975970012444456786469999999999999862-------43479764300056798651----------- Q ss_pred HHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 99985028743862586058888999999899986278998059985107863788988189988999999999999974 Q gi|254780652|r 241 IKIFKRVVPCAVQGIAFLSGGQSEQDATARLSAMNSMGDCPWRLSFSYGRALQESVLRAWNGKQDNVVVAQRVLSHRAHM 320 (339) Q Consensus 241 ~~~l~~~vP~~VpgIvFLSGGqs~eeAt~~LnaiNk~~~~pW~lsfSygRALQ~~~Lk~W~G~~eN~~~aQ~~~~~Rak~ 320 (339) ..++|++||||||||||||++|||.||| .||.||||||||||++ |++|++++| .++++...... T Consensus 226 ----~~~~p~~VpgIvfLSGGqSeeeAt~~Ln-------~pw~lsfSfgRAL~e~-L~a~q~~~e----f~~~l~~~i~~ 289 (296) T 2iqt_A 226 ----EIIEHPMMLRVVALSGGYSREQANELLS-------RNHGVIASFSRALVEG-LSARQTDAE----FNAMLEASIED 289 (296) T ss_dssp ----HHHTSTTEEEEEEECTTCCHHHHHHHHT-------TSTTCEEEESHHHHTT-CCTTSCHHH----HHHHHHHHHHH T ss_pred ----CCCCCCCCCEEEECCCCCCHHHHHHHHC-------CCCCEEEEHHHHHHHH-HCCCCCHHH----HHHHHHHHHHH T ss_conf ----3278766576853588778899998756-------9974066658987867-414667999----99999999999 Q ss_pred HHHHH Q ss_conf 15897 Q gi|254780652|r 321 NSLAT 325 (339) Q Consensus 321 ns~A~ 325 (339) ...|+ T Consensus 290 iy~AS 294 (296) T 2iqt_A 290 VYQAS 294 (296) T ss_dssp HHHHH T ss_pred HHHHH T ss_conf 99864 No 8 >3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolase, D-tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* Probab=97.54 E-value=0.0057 Score=38.47 Aligned_cols=259 Identities=17% Similarity=0.107 Sum_probs=138.4 Q ss_pred HCCCE-EEEECCCCCCHHHHHHHCCCC-CCHHHHHHHHHHHEECCCCHHEEEEEECCHHHHHHCCCCCCCHHHHHHHCCC Q ss_conf 47990-999146887757878857899-9867887545641007780230464346778841000488746798995798 Q gi|254780652|r 14 QAGKG-ILAADESNATIQKRFKAIHLE-STENSRRDYREMLFRAKDAMQYISSILLYEETLYQNAQDGTSFVDLISSSGV 91 (339) Q Consensus 14 ~~gKG-ilAaDeS~gt~~Krl~~igve-nteenr~~~R~~l~tsp~~~~~IsGvILfeeTl~q~~~~g~~~~~~l~~kGI 91 (339) ..|+- +||.||-+ ++-+-+...|.. .+.+.--.+..+++.. +..+-+ .||.|..+-+.. ... ...++ T Consensus 20 ~~G~~~~lA~DhR~-~l~~~~~~~~~~~~~~~~l~~~K~li~~~--l~~~as-giLlD~~yG~~a------l~~-~~~~~ 88 (332) T 3iv3_A 20 SNGVISALAFDQRG-ALKCLMAQYQMKEPTVAQMEELKVLVSEE--LTPYAS-SILLDPEYGLPA------AQA-RDREA 88 (332) T ss_dssp TTSCEEEEEECCSH-HHHHHHHTTTTSCCCHHHHHHHHHHHHHH--HGGGSS-EEEECTTTCHHH------HHT-SCTTC T ss_pred CCCCEEEEEECCHH-HHHHHHHHHCCCCCCHHHHHHHHHHHHHH--CCCCCC-EEEECHHHHHHH------HHH-HCCCC T ss_conf 89988999826668-99999998389987677899999999997--036898-899633244699------985-06796 Q ss_pred EEEEEECC-CEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 78994278-54217899986215783579999998543395550100023367787408888998999999999998447 Q gi|254780652|r 92 LVGIKVDR-GLKPYPLYPGEHITVGLDDLDVRLKQYKDAGARVAKWRVVLSVSDVLPSMTVVKANMHILARYAVLCQNAG 170 (339) Q Consensus 92 vpgIKVDk-Gl~~l~g~~~e~~t~GLD~L~eR~~~y~~~Ga~faKwRaVi~i~~~~Ps~~~I~~na~~larYA~i~Q~~G 170 (339) =.++-+++ |-.+.. .+.......+--.+++ ...|+.+.|-=..+..++ + ......+...+.+.+..|...| T Consensus 89 gliv~~e~sg~~~~~--~~~~~~~~~~~sv~~~---~~~GadaVK~lv~~~~d~--~-~e~~~~q~~~l~~l~~~c~~~g 160 (332) T 3iv3_A 89 GLLLAYEKTGYDANT--TSRLPDCLVDWSIKRL---KEAGADAVKFLLYYDVDG--D-PQVNVQKQAYIERIGSECQAED 160 (332) T ss_dssp EEEEECBCCCCCTTS--SCCCCCBCTTCCHHHH---HHTTCSEEEEEEEECTTS--C-HHHHHHHHHHHHHHHHHHHHHT T ss_pred EEEEEEECCCCCCCC--CCCCCCCCCCCCHHHH---HHCCCCEEEEEEECCCCC--C-HHHHHHHHHHHHHHHHHHHHCC T ss_conf 189998567777787--7766532346789999---856788899997459984--1-9999999999999999999759 Q ss_pred CCCEECHHHC---CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-------CCCHHHHHHHH Q ss_conf 8720110110---3775798999999999999999998763853111000025565764443-------58988998777 Q gi|254780652|r 171 LVPIVEPEVL---MEGDHTIERCAEVTEFVLRTLFNELYTMRVCFEGLVLKSNMILPGKSAP-------QVSDEEIASNT 240 (339) Q Consensus 171 LVPIVEPEVl---~dG~H~ie~~~~vte~vL~~lf~~L~~~~V~leg~lLKpnMv~pG~~~~-------~~~~eevA~~T 240 (339) +-=++||=+- .+.+++.+....-.+.++ ..+.... ..-+.--++|...+.....++ ..+.++..+.. T Consensus 161 ip~llE~l~~~~~~~~~~~~~~~~~~p~~v~-~a~~~~~--~~e~g~Di~K~e~p~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332) T 3iv3_A 161 IPFFLEILTYDETISNNSSVEFAKVKVHKVN-DAMKVFS--AERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAF 237 (332) T ss_dssp CCEEEEEEECBTTBSCTTSHHHHTTHHHHHH-HHHHHHT--SGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHH T ss_pred CCEEEEEECCCCCCCCCCCHHHHCCCHHHHH-HHHHHHH--HCCCCCCEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHH T ss_conf 9759997215777777532333101669999-9999998--467699889812898776653023210002479999999 Q ss_pred HHHHHHCCCCCCCEEEEECCCCCHHHHHHHHH-HHHCCCCCCCEEEEEHHHHHHHHHHHHHC Q ss_conf 99985028743862586058888999999899-98627899805998510786378898818 Q gi|254780652|r 241 IKIFKRVVPCAVQGIAFLSGGQSEQDATARLS-AMNSMGDCPWRLSFSYGRALQESVLRAWN 301 (339) Q Consensus 241 ~~~l~~~vP~~VpgIvFLSGGqs~eeAt~~Ln-aiNk~~~~pW~lsfSygRALQ~~~Lk~W~ 301 (339) - ..+-+.-.++|+||||-+.++=..-|. |+..- +.---|-.||++=+.+++.|. T Consensus 238 ~----~~~~~~~~P~VvLg~G~~~e~f~~~l~~A~~aG---a~~sGf~~GR~iw~~~~~~~~ 292 (332) T 3iv3_A 238 R----EQEASTDLPYIYLSAGVSAELFQETLVFAHKAG---AKFNGVLCGRATWAGSVQVYM 292 (332) T ss_dssp H----HHHHTCSSCEEEECTTCCHHHHHHHHHHHHHHT---CCCCEEEECHHHHTTHHHHHH T ss_pred H----HHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHC---CCCEEEEECHHHHHHHHHHHH T ss_conf 9----975147983899839989899999999999829---996389834476487899987 No 9 >1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1 Probab=95.49 E-value=0.15 Score=29.26 Aligned_cols=242 Identities=18% Similarity=0.210 Sum_probs=123.2 Q ss_pred EEEECCCCCCHHHHHHHCCCCC--CHHHHHHHHHHHEECCCCHHEEEEEECCHHHHHHCCCCCCCHHHHH--HHCCCEEE Q ss_conf 9991468877578788578999--8678875456410077802304643467788410004887467989--95798789 Q gi|254780652|r 19 ILAADESNATIQKRFKAIHLES--TENSRRDYREMLFRAKDAMQYISSILLYEETLYQNAQDGTSFVDLI--SSSGVLVG 94 (339) Q Consensus 19 ilAaDeS~gt~~Krl~~igven--teenr~~~R~~l~tsp~~~~~IsGvILfeeTl~q~~~~g~~~~~~l--~~kGIvpg 94 (339) +||.||- ++.-|-+...+-+. +++.-.+++..+.. .++.+-+| ||.+..+-. +..+ ...+.-.| T Consensus 20 ilA~DqR-~~l~~m~~~~~~~~~~~~~~l~~fK~~i~~--~l~~~asa-iLlD~~yG~--------~a~~~~~~~~~~~g 87 (304) T 1to3_A 20 MLAVDQR-EAMRLMFAAAGAKTPVADSVLTDFKVNAAK--ILSPYASA-VLLDQQFCY--------RQAVEQNAVAKSCA 87 (304) T ss_dssp EEECCCC-HHHHHHHHHTTCCSSCCHHHHHHHHHHHHH--HHGGGCSE-EEECTTTTH--------HHHHHTTCSCTTSE T ss_pred EEECCCH-HHHHHHHHHCCCCCCCCHHHHHHHHHHHHH--HHCCCCCE-EEECHHHHH--------HHHHHCCCCCCCEE T ss_conf 9956672-899999997289888873569999999998--62066867-877655527--------78753113367607 Q ss_pred EEECC-CEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 94278-54217899986215783579999998543395550100023367787408888998999999999998447872 Q gi|254780652|r 95 IKVDR-GLKPYPLYPGEHITVGLDDLDVRLKQYKDAGARVAKWRVVLSVSDVLPSMTVVKANMHILARYAVLCQNAGLVP 173 (339) Q Consensus 95 IKVDk-Gl~~l~g~~~e~~t~GLD~L~eR~~~y~~~Ga~faKwRaVi~i~~~~Ps~~~I~~na~~larYA~i~Q~~GLVP 173 (339) +-|.. +..+..+.++......-+--.+ .....|+.+-|-=..+.-++ +. ..+..++.+....|++.|+-= T Consensus 88 l~v~~~~~~~~~~~~~~~~~l~~~~sv~---~~~~~GadaVk~lv~~~pdd--~~----~~~~~~l~~l~~~c~~~g~p~ 158 (304) T 1to3_A 88 MIVAADDFIPGNGIPVDNVVLDKKINAQ---AVKRDGAKALKLLVLWRSDE--DA----QQRLNMVKEFNELCHSNGLLS 158 (304) T ss_dssp EEEECEEEEEETTEEEEEEEECSSCCHH---HHHHTTCCEEEEEEEECTTS--CH----HHHHHHHHHHHHHHHTTTCEE T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCHH---HHHHCCCCEEEEEEECCCCC--CH----HHHHHHHHHHHHHHHHCCCCE T ss_conf 9985057546778763000245454799---99856487899998628972--28----999999999999998639966 Q ss_pred EECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC Q ss_conf 01101103775798999999999999999998763853111000025565764443589889987779998502874386 Q gi|254780652|r 174 IVEPEVLMEGDHTIERCAEVTEFVLRTLFNELYTMRVCFEGLVLKSNMILPGKSAPQVSDEEIASNTIKIFKRVVPCAVQ 253 (339) Q Consensus 174 IVEPEVl~dG~H~ie~~~~vte~vL~~lf~~L~~~~V~leg~lLKpnMv~pG~~~~~~~~eevA~~T~~~l~~~vP~~Vp 253 (339) ++||=+.-....+-+.. .+.| ....+.+.+.++++ +|...+..+... .++..+. +++.+-+.-. T Consensus 159 llE~~~~~~~~~d~~~~---~~~i-~~a~r~~~e~G~Di----~K~~~P~~~~~~----~~~~~~~----~~~~~~~~~~ 222 (304) T 1to3_A 159 IIEPVVRPPRCGDKFDR---EQAI-IDAAKELGDSGADL----YKVEMPLYGKGA----RSDLLTA----SQRLNGHINM 222 (304) T ss_dssp EEEEEECCCSSCSCCCH---HHHH-HHHHHHHTTSSCSE----EEECCGGGGCSC----HHHHHHH----HHHHHHTCCS T ss_pred EEEEEECCCCCCCCCCH---HHHH-HHHHHHHHHCCCCE----EEEECCCCCCHH----HHHHHHH----HHHHHCCCCC T ss_conf 99985147776654107---9999-99999998739987----999788775322----4689999----9998515899 Q ss_pred EEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHC Q ss_conf 258605888899999989998627899805998510786378898818 Q gi|254780652|r 254 GIAFLSGGQSEQDATARLSAMNSMGDCPWRLSFSYGRALQESVLRAWN 301 (339) Q Consensus 254 gIvFLSGGqs~eeAt~~LnaiNk~~~~pW~lsfSygRALQ~~~Lk~W~ 301 (339) ++++||||-+.++-...|..--+. + .--|-+||++=+.++..|. T Consensus 223 p~vvLggg~~~e~f~~~l~~A~~a-G---a~G~~~GR~iwq~~~~~~~ 266 (304) T 1to3_A 223 PWVILSSGVDEKLFPRAVRVAMEA-G---ASGFLAGRAVWSSVIGLPD 266 (304) T ss_dssp CEEECCTTSCTTTHHHHHHHHHHT-T---CCEEEESHHHHGGGTTCSC T ss_pred CEEEECCCCCHHHHHHHHHHHHHC-C---CEEEEECHHHHHCCCCCHH T ss_conf 489982898989999999999976-9---9399856264347114544 No 10 >3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum} Probab=54.28 E-value=11 Score=17.11 Aligned_cols=224 Identities=20% Similarity=0.149 Sum_probs=106.8 Q ss_pred CCCE-EEEECCCCCCHHHHHHHCCCCC---CHHHHHHHHHHHEE---CCCCHHEEEEEECCHHHHHHCCCCCCCHHHHHH Q ss_conf 7990-9991468877578788578999---86788754564100---778023046434677884100048874679899 Q gi|254780652|r 15 AGKG-ILAADESNATIQKRFKAIHLES---TENSRRDYREMLFR---AKDAMQYISSILLYEETLYQNAQDGTSFVDLIS 87 (339) Q Consensus 15 ~gKG-ilAaDeS~gt~~Krl~~igven---teenr~~~R~~l~t---sp~~~~~IsGvILfeeTl~q~~~~g~~~~~~l~ 87 (339) .||- |+|+|+-. | ...++.+ .-.+|+..-++|.+ .|+.. |+++-...+..-.- +.. T Consensus 41 ~GrllIvA~DHpa-----r-g~~~~~~~~~am~~r~~ll~rl~~ala~~GvD----gvl~t~gile~l~~-------~ga 103 (307) T 3fok_A 41 DGKLFIVAADHPA-----R-GALAVGDNETAMANRYELLERMAIALSRPGVD----GVLGTPDIIDDLAA-------LGL 103 (307) T ss_dssp TCCEEEEECCSGG-----G-TCCCSSSSSSSSSCHHHHHHHHHHHHHSTTCC----EEEECHHHHHHHHH-------TTC T ss_pred CCCEEEEECCCCC-----C-CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC----EEEECHHHHHHHHH-------CCC T ss_conf 9878999677734-----3-45677888766566899999999972437987----58757889865553-------024 Q ss_pred HCCCEEEEEECCCEEECCCC-CCCCCCCCHHHHHHHHHHHHHCCCEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 57987899427854217899-98621578357999999854339555010002336778740888899899999999999 Q gi|254780652|r 88 SSGVLVGIKVDRGLKPYPLY-PGEHITVGLDDLDVRLKQYKDAGARVAKWRVVLSVSDVLPSMTVVKANMHILARYAVLC 166 (339) Q Consensus 88 ~kGIvpgIKVDkGl~~l~g~-~~e~~t~GLD~L~eR~~~y~~~Ga~faKwRaVi~i~~~~Ps~~~I~~na~~larYA~i~ 166 (339) -.+-+.+.-...|-..-... .+.+.| +-| ..+...+|+.+.|+=.-|..+ .|.. ..+...+++.+.-| T Consensus 104 l~~~lv~~~~n~~g~~~~~~e~ddr~~-~~~-----ve~a~rlGaDavk~lv~i~~~--dp~~---~~~le~~a~~v~e~ 172 (307) T 3fok_A 104 LDDKIVVGSMNRGGLRGASFEMDDRYT-GYN-----VSSMVDRGVDFAKTLVRINLS--DAGT---APTLEATAHAVNEA 172 (307) T ss_dssp CTTCEEEEECCCCSCTTCTTTTSCCCC-SCC-----HHHHHHHTCCEEEEEEEECTT--CTTH---HHHHHHHHHHHHHH T ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCC-CCC-----HHHHHHCCCCEEEEEEEECCC--CCCH---HHHHHHHHHHHHHH T ss_conf 455469997204676666546677401-347-----999997289979999874799--9436---99999999999999 Q ss_pred HHCCCCCEECHHHCC------CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH Q ss_conf 844787201101103------77579899999999999999999876385311100002556576444358988998777 Q gi|254780652|r 167 QNAGLVPIVEPEVLM------EGDHTIERCAEVTEFVLRTLFNELYTMRVCFEGLVLKSNMILPGKSAPQVSDEEIASNT 240 (339) Q Consensus 167 Q~~GLVPIVEPEVl~------dG~H~ie~~~~vte~vL~~lf~~L~~~~V~leg~lLKpnMv~pG~~~~~~~~eevA~~T 240 (339) .+.||.=+|||=+.- ..+.+.+ .| ...-..-.+ |-..+.|..+-+|..+ +.++|...| T Consensus 173 ~~~glp~mvEp~~~~~~~g~~~~d~~~e-------~v-~~a~riAae----LGadivkt~lk~p~~~----~~~~V~~a~ 236 (307) T 3fok_A 173 AAAQLPIMLEPFMSNWVNGKVVNDLSTD-------AV-IQSVAIAAG----LGNDSSYTWMKLPVVE----EMERVMEST 236 (307) T ss_dssp HHTTCCEEEEEEEEEEETTEEEECCSHH-------HH-HHHHHHHHT----CSSCCSSEEEEEECCT----THHHHGGGC T ss_pred HHCCCCEEEEEEEECCCCCCCCCCCCHH-------HH-HHHHHHHHH----HCCCCCCCCCCCCCCC----HHHHHHHHC T ss_conf 9759966998765125888656778889-------99-999999998----5767010357789853----699999716 Q ss_pred HHHHHHCCCCCCCEEEEECCCCCHH-HHHHHHHHHHCCCCCCCEEEEEHHHHHHHH Q ss_conf 9998502874386258605888899-999989998627899805998510786378 Q gi|254780652|r 241 IKIFKRVVPCAVQGIAFLSGGQSEQ-DATARLSAMNSMGDCPWRLSFSYGRALQES 295 (339) Q Consensus 241 ~~~l~~~vP~~VpgIvFLSGGqs~e-eAt~~LnaiNk~~~~pW~lsfSygRALQ~~ 295 (339) .+| |+++.|+-+.. |. -|...-+.-..|=.--..+||.+-++ T Consensus 237 ----------~~P-vli~GG~~~~d~e~--~l~~~~~Al~~~Ga~G~~~GRnv~~~ 279 (307) T 3fok_A 237 ----------TMP-TLLLGGEGGNDPDA--TFASWEHALTLPGVRGLTVGRTLLYP 279 (307) T ss_dssp ----------SSC-EEEECCSCC--CHH--HHHHHHHHTTSTTEEEEEECTTTSSC T ss_pred ----------CCC-EEEECCCCCCCHHH--HHHHHHHHHHHCCCEEEEECCCCCCC T ss_conf ----------987-89966998899999--99999999970798089887123668 No 11 >1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic acid, AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A* Probab=51.41 E-value=12 Score=16.81 Aligned_cols=46 Identities=15% Similarity=0.087 Sum_probs=22.0 Q ss_pred HHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEE Q ss_conf 7799985028743862586058888999999899986278998059985 Q gi|254780652|r 239 NTIKIFKRVVPCAVQGIAFLSGGQSEQDATARLSAMNSMGDCPWRLSFS 287 (339) Q Consensus 239 ~T~~~l~~~vP~~VpgIvFLSGGqs~eeAt~~LnaiNk~~~~pW~lsfS 287 (339) .-..+.++++...||-.+|||||.. ++.-...+++........||. T Consensus 229 ~L~~aV~~rl~sd~~vg~~LSGGlD---SSlIaala~k~~~~~~t~s~~ 274 (513) T 1jgt_A 229 ALEKAVAQRVTPGDTPLVVLSGGID---SSGVAACAHRAAGELDTVSMG 274 (513) T ss_dssp HHHHHHHHHSCTTCCCEEECCSSHH---HHHHHHHHHHHHSSCEEEEEE T ss_pred HHHHHHHHHCCCCCCCEEECCCCCC---HHHHHHHHHHHCCCCCEEECC T ss_conf 9987777633578887697789834---499999876412443257424 No 12 >1y89_A DEVB protein; structural genomics, protein structure initiative, PSI, midwest center for structural genomics, MCSG; HET: 2PE; 2.00A {Vibrio cholerae o1 biovar eltor str} Probab=48.48 E-value=5.7 Score=18.87 Aligned_cols=20 Identities=15% Similarity=0.116 Sum_probs=8.5 Q ss_pred CCCCCCHHHHHHHHHHHHHH Q ss_conf 37757989999999999999 Q gi|254780652|r 181 MEGDHTIERCAEVTEFVLRT 200 (339) Q Consensus 181 ~dG~H~ie~~~~vte~vL~~ 200 (339) +++..+.+.+..--++.+.. T Consensus 102 ~~~~~~~~~~~~~~~~~l~~ 121 (238) T 1y89_A 102 ILGENEPQAEAERFAQAMAH 121 (238) T ss_dssp CCTTSCHHHHHHHHHHHHHH T ss_pred CCCCCCHHHHHHHHHHHHHH T ss_conf 67778989999999999998 No 13 >3ju2_A Uncharacterized protein SMC04130; structural genomics, PSI-2, TIM barrel protein, protein structure initiative, Zn binding domain; 1.80A {Sinorhizobium meliloti} Probab=48.21 E-value=13 Score=16.49 Aligned_cols=111 Identities=14% Similarity=0.115 Sum_probs=66.5 Q ss_pred EEEECCHHHHHHCCCCCCCHHHHHHHCCCEE-EEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCEECCC Q ss_conf 6434677884100048874679899579878-994278542178999862157835799999985433955501000233 Q gi|254780652|r 63 SSILLYEETLYQNAQDGTSFVDLISSSGVLV-GIKVDRGLKPYPLYPGEHITVGLDDLDVRLKQYKDAGARVAKWRVVLS 141 (339) Q Consensus 63 sGvILfeeTl~q~~~~g~~~~~~l~~kGIvp-gIKVDkGl~~l~g~~~e~~t~GLD~L~eR~~~y~~~Ga~faKwRaVi~ 141 (339) .|+-|+.+.+.. .+-.-+.+++.+.||-+ ++-+ ...+.+.+.+..-+.++.+..-+.-.+..|+. +=.+.. T Consensus 34 ~~IEl~~~~~~~--~~~~e~~~~l~~~gl~v~~~~~---~~~~~~~d~~~~~~~i~~~~~~i~~a~~lG~~---~i~~~~ 105 (284) T 3ju2_A 34 TAIAPWRDQVAA--IGLGEAGRIVRANGLKLTGLCR---GGFFPAPDASGREKAIDDNRRAVDEAAELGAD---CLVLVA 105 (284) T ss_dssp CEEECBHHHHHH--HCHHHHHHHHHHTTCEESCEEE---EECCCCSSHHHHHHHHHHHHHHHHHHHHHTBS---CEEEEC T ss_pred CEEEECCCCCCC--CCHHHHHHHHHHCCCEEEEEEC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC---EEEECC T ss_conf 989977766787--8999999999983995999876---76668899899999999999999999994998---369567 Q ss_pred ---CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHCC Q ss_conf ---6778740888899899999999999844787201101103 Q gi|254780652|r 142 ---VSDVLPSMTVVKANMHILARYAVLCQNAGLVPIVEPEVLM 181 (339) Q Consensus 142 ---i~~~~Ps~~~I~~na~~larYA~i~Q~~GLVPIVEPEVl~ 181 (339) -....+.+.....-+..+.+.+..+.+.|+...+||.-.. T Consensus 106 g~~~~~~~~~~~~~~~~~~~l~~l~~~A~~~gv~l~~E~~~~~ 148 (284) T 3ju2_A 106 GGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPLHPM 148 (284) T ss_dssp BCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCGG T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC T ss_conf 9866788999999999999999999998743625898614764 No 14 >2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A* Probab=38.76 E-value=18 Score=15.55 Aligned_cols=15 Identities=13% Similarity=0.105 Sum_probs=7.1 Q ss_pred CCEEEEEHHHHHHHH Q ss_conf 805998510786378 Q gi|254780652|r 281 PWRLSFSYGRALQES 295 (339) Q Consensus 281 pW~lsfSygRALQ~~ 295 (339) ++.+|+++.--+++. T Consensus 177 ~~riTlt~~~i~~ak 191 (242) T 2bkx_A 177 KKALTMGIQTILSSK 191 (242) T ss_dssp SEEEECCHHHHHTSS T ss_pred CEEEECCHHHHHCCC T ss_conf 424627999994886 No 15 >2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative; 2.25A {Escherichia coli O157} SCOP: c.1.10.7 Probab=34.54 E-value=21 Score=15.13 Aligned_cols=189 Identities=14% Similarity=0.089 Sum_probs=90.6 Q ss_pred CCCCCCHHHHHHHHHHHHHCCCEEECCEECCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHC-------CCCCEECHHHCC Q ss_conf 6215783579999998543395550100023367-78740888899899999999999844-------787201101103 Q gi|254780652|r 110 EHITVGLDDLDVRLKQYKDAGARVAKWRVVLSVS-DVLPSMTVVKANMHILARYAVLCQNA-------GLVPIVEPEVLM 181 (339) Q Consensus 110 e~~t~GLD~L~eR~~~y~~~Ga~faKwRaVi~i~-~~~Ps~~~I~~na~~larYA~i~Q~~-------GLVPIVEPEVl~ 181 (339) ...-+.+..-.+-+.+|-..| |+|-.==-++. .+.|..+.....++.-++.+.+|-+. .+|=||--||.. T Consensus 97 ~~~~~AM~~a~~li~~~i~AG--F~kIhiD~S~~~~~e~~~l~~e~vaeRaa~L~~~aE~~~~~~~~~~~~yvIGTEvp~ 174 (420) T 2fiq_A 97 ENVDAAMEKSVELVKAYVRAG--FSKIHLDASMSCAGDPIPLAPETVAERAAVLCFAAESVATDCQREQLSYVIGTEVPV 174 (420) T ss_dssp SBHHHHHHHHHHHHHHHHHTT--CCEEEECCCSCCBTCCSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHCEEEEECSSCC T ss_pred CCHHHHHHHHHHHHHHHHHCC--CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC T ss_conf 899999999999999999869--967985267776656877888999999999999999999863899845996015789 Q ss_pred CCCCCHH---------HHHHHHHHHHHHHHHHHHHCCCC--CCCCCCCCCCCCCCCC----C-CCCCHHHHHHHHHHHHH Q ss_conf 7757989---------99999999999999998763853--1110000255657644----4-35898899877799985 Q gi|254780652|r 182 EGDHTIE---------RCAEVTEFVLRTLFNELYTMRVC--FEGLVLKSNMILPGKS----A-PQVSDEEIASNTIKIFK 245 (339) Q Consensus 182 dG~H~ie---------~~~~vte~vL~~lf~~L~~~~V~--leg~lLKpnMv~pG~~----~-~~~~~eevA~~T~~~l~ 245 (339) -|--+-+ ..+.-|-.+.+..|......++. .-+.. |-||.. . ..+.++..... + T Consensus 175 pGga~~~~~~~~vt~~e~~~~t~~~~~~aF~~~gl~~~~~rV~~lV-----VqpGvef~~~~v~~y~~~~a~~L-----~ 244 (420) T 2fiq_A 175 PGGEASAIQSVHITHVEDAANTLRTHQKAFIARGLTEALTRVIAIV-----VQPGVEFDHSNIIHYQPQEAQAL-----A 244 (420) T ss_dssp ----------CCCCCHHHHHHHHHHHHHHHHTTTCHHHHHTEEEEE-----CCCSCEECSSCEECCCGGGGHHH-----H T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEE-----ECCCCCCCCCCCCCCCHHHHHHH-----H T ss_conf 9875454445665779999998876789999737056654544012-----24660028776677798999999-----9 Q ss_pred HCCCCCCCEEEE--ECCCCCHHHHHHHHHHHHC-CCCCCCEEEEEHHHHHHHHH--HHHHCC--CHHHHHHHHH Q ss_conf 028743862586--0588889999998999862-78998059985107863788--988189--9889999999 Q gi|254780652|r 246 RVVPCAVQGIAF--LSGGQSEQDATARLSAMNS-MGDCPWRLSFSYGRALQESV--LRAWNG--KQDNVVVAQR 312 (339) Q Consensus 246 ~~vP~~VpgIvF--LSGGqs~eeAt~~LnaiNk-~~~~pW~lsfSygRALQ~~~--Lk~W~G--~~eN~~~aQ~ 312 (339) ..+ ..|+++| =|+-|-..++-..|-..+= +-+---.|+|-|-+||-.-+ -+.|-. +..|+.++-+ T Consensus 245 ~~~--~~p~lvfeaHsTDYq~~~~L~~lV~~gfailkVGP~LTfa~reAL~~L~~Ie~~l~~~~~~s~l~~~~e 316 (420) T 2fiq_A 245 QWI--ENTRMVYEAHSTDYQTRTAYWELVRDHFAILKVGPALTFALREAIFALAQIEQELIAPENRSGCLAVIE 316 (420) T ss_dssp HHH--TTSSCEEEESCCTTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHHHHHSCTTTCCCHHHHHH T ss_pred HHH--CCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH T ss_conf 974--759946774677899979999999769857851757869999999989999998648655222799999 No 16 >2kxe_A DNA polymerase II small subunit; D-family, archara, helical BU transferase; HET: DNA; NMR {Pyrococcus horikoshii} Probab=32.32 E-value=4.6 Score=19.47 Aligned_cols=43 Identities=19% Similarity=0.212 Sum_probs=30.6 Q ss_pred HHHHHHHCC-------CEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHH Q ss_conf 999854339-------5550100023367787408888998999999999998447872011011 Q gi|254780652|r 122 RLKQYKDAG-------ARVAKWRVVLSVSDVLPSMTVVKANMHILARYAVLCQNAGLVPIVEPEV 179 (339) Q Consensus 122 R~~~y~~~G-------a~faKwRaVi~i~~~~Ps~~~I~~na~~larYA~i~Q~~GLVPIVEPEV 179 (339) -+.+||+.| .+|||-|.++-|++.+.. ---+..|+.|+.-||+ T Consensus 25 LL~~~y~k~~FsL~ELiKFAksrgtfvId~~lA~---------------EFL~~kGl~~~lp~e~ 74 (75) T 2kxe_A 25 LLVGHFNEGKFSLIELIKFAKSRETFIIDDEIAN---------------EFLKSIGAEVELPQEI 74 (75) T ss_dssp HHHHHHHTTSSCHHHHHHHHHHHTCSEECHHHHH---------------HHHHHHTCCCCCSSCC T ss_pred HHHHHHHCCCCCHHHHHHHHHHCCCEEECHHHHH---------------HHHHHCCCCCCCCCCC T ss_conf 9998853155109999999873685785369999---------------9999668888898666 No 17 >2jr2_A UPF0352 protein CPS_2611; dimer, all alpha helix, homodimer, structural genomics, PSI, protein structure initiative; NMR {Colwellia psychrerythraea 34H} SCOP: a.284.1.1 PDB: 2ota_A Probab=30.34 E-value=7.2 Score=18.20 Aligned_cols=31 Identities=19% Similarity=0.219 Sum_probs=21.3 Q ss_pred HHHHHHHHHHHHHHHHCC--CCCCCCCCCCCCCC Q ss_conf 999999999999987638--53111000025565 Q gi|254780652|r 192 EVTEFVLRTLFNELYTMR--VCFEGLVLKSNMIL 223 (339) Q Consensus 192 ~vte~vL~~lf~~L~~~~--V~leg~lLKpnMv~ 223 (339) +--|.++.+++..|..|+ ++|..++|- |||| T Consensus 10 ~qvE~il~el~~VLeKH~Ap~DLSLMvLG-N~vT 42 (76) T 2jr2_A 10 ERVEKIIQDLLDVLVKEEVTPDLALMCLG-NAVT 42 (76) T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHHHHHH-HHHH T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHH-HHHH T ss_conf 98999999999999866999307999999-9999 No 18 >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site, oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Probab=28.04 E-value=18 Score=15.65 Aligned_cols=26 Identities=12% Similarity=0.130 Sum_probs=20.1 Q ss_pred CEEEEECCCCCHHHHHHHHHHHHCCC Q ss_conf 62586058888999999899986278 Q gi|254780652|r 253 QGIAFLSGGQSEQDATARLSAMNSMG 278 (339) Q Consensus 253 pgIvFLSGGqs~eeAt~~LnaiNk~~ 278 (339) ||=..-|+|.|.+-.-..|-++||.. T Consensus 384 ~GH~~~~~g~t~~~dGk~l~~~nK~s 409 (595) T 1fwx_A 384 PGHLKTVMGETLDATNDWLVCLSKFS 409 (595) T ss_dssp EEEEEETTTTSTTCCSSEEEEEESCC T ss_pred CCCCCCCCCCCCCCCCCEEEECCCCC T ss_conf 87653577786788875898514223 No 19 >1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1 Probab=27.32 E-value=28 Score=14.34 Aligned_cols=32 Identities=22% Similarity=0.181 Sum_probs=23.5 Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCEEEEECCCC Q ss_conf 89889987779998502874386258605888 Q gi|254780652|r 231 VSDEEIASNTIKIFKRVVPCAVQGIAFLSGGQ 262 (339) Q Consensus 231 ~~~eevA~~T~~~l~~~vP~~VpgIvFLSGGq 262 (339) ...+++-+.-..+.++++.+.||--+|||||- T Consensus 206 ~~~~~~~~lL~~aV~~rl~sdvpvg~~LSGGl 237 (553) T 1ct9_A 206 TDKNELRQALEDSVKSHLMSDVPYGVLLSGGL 237 (553) T ss_dssp CCHHHHHHHHHHHHHHHTCCSSCEEEECCSSH T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC T ss_conf 56999999999997556508875147736997 No 20 >1qni_A Nitrous-oxide reductase; oxidoreductase, denitrification, MAD, electron transfer; 2.40A {Pseudomonas nautica} SCOP: b.6.1.4 b.69.3.1 Probab=25.71 E-value=19 Score=15.44 Aligned_cols=25 Identities=16% Similarity=0.126 Sum_probs=17.4 Q ss_pred CEEEEECCCCCHHHHHHHHHHHHCC Q ss_conf 6258605888899999989998627 Q gi|254780652|r 253 QGIAFLSGGQSEQDATARLSAMNSM 277 (339) Q Consensus 253 pgIvFLSGGqs~eeAt~~LnaiNk~ 277 (339) ||-..-|+|.|.+-.-..|.++||. T Consensus 374 ~gh~~~~~g~t~~~~gk~l~~~nk~ 398 (581) T 1qni_A 374 PGHNHASLTESRDADGKWLVVLSKF 398 (581) T ss_dssp EEEEEETTTTSTTCCCCEEEEEESC T ss_pred CCCCCCCCCCCCCCCCCEEEEECCC T ss_conf 9876157778789888799980453 No 21 >2juz_A UPF0352 protein HI0840; homodimer, helix, structural genomics, PSI-2, protein structure initiative; NMR {Haemophilus influenzae} SCOP: a.284.1.1 Probab=25.30 E-value=24 Score=14.76 Aligned_cols=26 Identities=12% Similarity=0.125 Sum_probs=18.3 Q ss_pred HHHHHHHHHHHHHHHHCC--CCCCCCCC Q ss_conf 999999999999987638--53111000 Q gi|254780652|r 192 EVTEFVLRTLFNELYTMR--VCFEGLVL 217 (339) Q Consensus 192 ~vte~vL~~lf~~L~~~~--V~leg~lL 217 (339) +--|.++.+++..|..|+ ++|..+.| T Consensus 10 ~qvE~il~el~~VLeKH~Ap~DLSLMvL 37 (80) T 2juz_A 10 AQLSAIVNDMIAVLEKHKAPVDLSLIAL 37 (80) T ss_dssp HHHHHHHHHHHHHHHHHTCCSHHHHHHH T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHH T ss_conf 8999999999999985599941599999 No 22 >1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A* Probab=25.27 E-value=31 Score=14.10 Aligned_cols=15 Identities=33% Similarity=0.204 Sum_probs=5.4 Q ss_pred CCCCCCCEEEEECCC Q ss_conf 287438625860588 Q gi|254780652|r 247 VVPCAVQGIAFLSGG 261 (339) Q Consensus 247 ~vP~~VpgIvFLSGG 261 (339) .++..||--+||||| T Consensus 234 ~l~sd~pvg~~LSGG 248 (503) T 1q15_A 234 LAPRFDTVGIPLSGG 248 (503) T ss_dssp HGGGCSEEEEECCSS T ss_pred HCCCCCCEEEEECCC T ss_conf 626898568980587 No 23 >2jrx_A UPF0352 protein YEJL; homodimer, alpha helix, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli K12} SCOP: a.284.1.1 Probab=24.06 E-value=23 Score=14.92 Aligned_cols=31 Identities=32% Similarity=0.367 Sum_probs=20.5 Q ss_pred HHHHHHHHHHHHHHHHCC--CCCCCCCCCCCCCC Q ss_conf 999999999999987638--53111000025565 Q gi|254780652|r 192 EVTEFVLRTLFNELYTMR--VCFEGLVLKSNMIL 223 (339) Q Consensus 192 ~vte~vL~~lf~~L~~~~--V~leg~lLKpnMv~ 223 (339) +--|.++.+++..|..|+ ++|..+.| -|||| T Consensus 10 ~qvE~il~el~~VLeKH~Ap~DLSLMvL-GN~vT 42 (83) T 2jrx_A 10 EQVEQLLAELLNVLEKHKAPTDLSLMVL-GNMVT 42 (83) T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHHHHH-HHHHH T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHH-HHHHH T ss_conf 9999999999999986599930799999-89999 No 24 >3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI, infectious disease, LYME disease, non-hodgkin lymphomas; 2.20A {Borrelia burgdorferi B31} Probab=23.18 E-value=34 Score=13.85 Aligned_cols=19 Identities=16% Similarity=0.291 Sum_probs=13.4 Q ss_pred CEEEEECCCCCHHHHHHHH Q ss_conf 6258605888899999989 Q gi|254780652|r 253 QGIAFLSGGQSEQDATARL 271 (339) Q Consensus 253 pgIvFLSGGqs~eeAt~~L 271 (339) -.|+||--|..-.++-..+ T Consensus 218 k~I~llv~G~~Ka~~l~~~ 236 (289) T 3hn6_A 218 QEVLIIVNGHNKARALKHA 236 (289) T ss_dssp SCEEEEECSGGGHHHHHHH T ss_pred CEEEEEECCHHHHHHHHHH T ss_conf 6699997285899999999 No 25 >3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A* Probab=22.96 E-value=34 Score=13.82 Aligned_cols=17 Identities=12% Similarity=0.241 Sum_probs=7.9 Q ss_pred CEEEEECCCCCHHHHHH Q ss_conf 62586058888999999 Q gi|254780652|r 253 QGIAFLSGGQSEQDATA 269 (339) Q Consensus 253 pgIvFLSGGqs~eeAt~ 269 (339) ..|+||--|..-.++-. T Consensus 212 ~~i~ll~~G~~K~~~l~ 228 (266) T 3eb9_A 212 RNVIVLATGAEKKWVVD 228 (266) T ss_dssp SEEEEEECCGGGHHHHH T ss_pred CEEEEEECCHHHHHHHH T ss_conf 83999981889999999 No 26 >3l23_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis} Probab=22.13 E-value=35 Score=13.72 Aligned_cols=93 Identities=9% Similarity=0.065 Sum_probs=50.0 Q ss_pred HHHHHHHCCCE-EEEEECCCEEECCCC--------CCCCCCCCHHHHHHHHHHHHHCCCEEECCEECCCCCCCCCHHHHH Q ss_conf 67989957987-899427854217899--------986215783579999998543395550100023367787408888 Q gi|254780652|r 82 FVDLISSSGVL-VGIKVDRGLKPYPLY--------PGEHITVGLDDLDVRLKQYKDAGARVAKWRVVLSVSDVLPSMTVV 152 (339) Q Consensus 82 ~~~~l~~kGIv-pgIKVDkGl~~l~g~--------~~e~~t~GLD~L~eR~~~y~~~Ga~faKwRaVi~i~~~~Ps~~~I 152 (339) +...|.+.|+- .++-+.-........ ..+..-+.++.+..-+......||++. ++.......+.... T Consensus 64 lk~~l~~~gL~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~lG~~~v----~~~~~~~~~~~~~~ 139 (303) T 3l23_A 64 FKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYL----IQPMMPTITTHDEA 139 (303) T ss_dssp HHHHHHHTTCEEEEEECCCBCTTCSSTTTTBCCSCCTTTHHHHHHHHHHHHHHHHHTTCSEE----EECSCCCCCSHHHH T ss_pred HHHHHHHCCCCEEECCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEE----ECCCCCCCCCHHHH T ss_conf 99999987997556454665433465101100224899999999999999999998594989----73899875668999 Q ss_pred HHHHHHHHHHHHHHHHCCCCCEECHH Q ss_conf 99899999999999844787201101 Q gi|254780652|r 153 KANMHILARYAVLCQNAGLVPIVEPE 178 (339) Q Consensus 153 ~~na~~larYA~i~Q~~GLVPIVEPE 178 (339) ...+..+-+++..+.+.|+...+||. T Consensus 140 ~~~~~~l~~~~~~a~~~Gv~~~~E~~ 165 (303) T 3l23_A 140 KLVCDIFNQASDVIKAEGIATGFGYH 165 (303) T ss_dssp HHHHHHHHHHHHHHHHTTCTTCEEEE T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEC T ss_conf 99999999999999867985999725 No 27 >3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* Probab=21.96 E-value=35 Score=13.69 Aligned_cols=61 Identities=13% Similarity=0.184 Sum_probs=45.5 Q ss_pred CCCCHHHHHHHCCCEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCEECCCCC Q ss_conf 887467989957987899427854217899986215783579999998543395550100023367 Q gi|254780652|r 78 DGTSFVDLISSSGVLVGIKVDRGLKPYPLYPGEHITVGLDDLDVRLKQYKDAGARVAKWRVVLSVS 143 (339) Q Consensus 78 ~g~~~~~~l~~kGIvpgIKVDkGl~~l~g~~~e~~t~GLD~L~eR~~~y~~~Ga~faKwRaVi~i~ 143 (339) +-+.+++++.++|.-+||-.+-|.....+.++.. .-+..-++.|...|..|-|+=....-. T Consensus 95 Glk~lad~ih~~Glk~GIy~~pg~~~c~~~pgs~-----~~~~~d~~~fa~wGvdylK~D~~~~~~ 155 (479) T 3lrk_A 95 GMGHVADHLHNNSFLFGMYSSAGEYTCAGYPGSL-----GREEEDAQFFANNRVDYLKYDNCYNKG 155 (479) T ss_dssp CHHHHHHHHHHTTCEEEEEEESSSBCTTSSBCCT-----TCHHHHHHHHHHTTCCEEEEECTTCTT T ss_pred CHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHH-----HHHHHHHHHHHHHCCCCCCCCCCCCCC T ss_conf 2799999999769863279557765357884367-----689999999998688700246777854 No 28 >2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum} Probab=20.74 E-value=29 Score=14.29 Aligned_cols=32 Identities=6% Similarity=0.006 Sum_probs=14.9 Q ss_pred HHHHHHHHCCCEEEE---ECCCCCCHHHHHHHCCC Q ss_conf 999999747990999---14688775787885789 Q gi|254780652|r 7 NSVAMMLQAGKGILA---ADESNATIQKRFKAIHL 38 (339) Q Consensus 7 ~~a~~~~~~gKGilA---aDeS~gt~~Krl~~igv 38 (339) +.++.+.....-+-+ .=.++||+|.=-+.+|+ T Consensus 24 ~ll~gL~~~~~~lt~IVn~~DdggssG~lr~~~g~ 58 (341) T 2p0y_A 24 VVLNGLRKQAVDITAVVTVADDGGSSGIIRNYVNV 58 (341) T ss_dssp HHHHHHHHSSSEEEEECC----------------- T ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCCC T ss_conf 99999864899859999886387213689986599 No 29 >1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase, multiple conformers; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A Probab=20.22 E-value=38 Score=13.46 Aligned_cols=20 Identities=15% Similarity=0.104 Sum_probs=13.1 Q ss_pred CCEEEEECCCCCHHHHHHHH Q ss_conf 86258605888899999989 Q gi|254780652|r 252 VQGIAFLSGGQSEQDATARL 271 (339) Q Consensus 252 VpgIvFLSGGqs~eeAt~~L 271 (339) ...|+|+--|..-.++-..+ T Consensus 196 Ak~i~llv~G~~Ka~al~~~ 215 (266) T 1fs5_A 196 AEEVMILVLGSQKALALQAA 215 (266) T ss_dssp SSCEEEEECSGGGHHHHHHH T ss_pred CCEEEEEEECHHHHHHHHHH T ss_conf 58799997287899999999 No 30 >1m7y_A ACC synthase, 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, pyridoxal phosphate, lyase; HET: PPG; 1.60A {Malus x domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1ynu_A* 1b8g_A* Probab=20.17 E-value=39 Score=13.45 Aligned_cols=62 Identities=13% Similarity=0.152 Sum_probs=37.2 Q ss_pred HHHHHHHHHHHHHCCCEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHCCCC Q ss_conf 35799999985433955501000233677874088889989999999999984478720110110377 Q gi|254780652|r 116 LDDLDVRLKQYKDAGARVAKWRVVLSVSDVLPSMTVVKANMHILARYAVLCQNAGLVPIVEPEVLMEG 183 (339) Q Consensus 116 LD~L~eR~~~y~~~Ga~faKwRaVi~i~~~~Ps~~~I~~na~~larYA~i~Q~~GLVPIVEPEVl~dG 183 (339) ++.|.+.+.+....+ .+-+.++-...+.|+-.+. ....+.+.+.+|+++|+ +||+=|+-.+. T Consensus 175 ~~~l~~~~~~~~~~~---~~~~~v~~~nP~NPtG~~~--s~~~l~~l~~~~~~~~~-~vi~De~Y~~~ 236 (435) T 1m7y_A 175 ETALEEAYQEAEKRN---LRVKGVLVTNPSNPLGTTM--TRNELYLLLSFVEDKGI-HLISDEIYSGT 236 (435) T ss_dssp HHHHHHHHHHHHHTT---CCEEEEEEESSCTTTCCCC--CHHHHHHHHHHHHHHTC-EEEEECTTGGG T ss_pred HHHHHHHHHHHHHHC---CCEEEEEECCCCCCCCCEE--CHHHHHHHHHHCCCCCE-EEEEEECCCCC T ss_conf 899888777777615---8758999679999976500--61432257540334767-99997242212 Done!