HHSEARCH alignment of GI: 254780652 and SCOP domain: d1to3a_

Alignment
>d1to3a_ c.1.10.1 (A:) Putative aldolase YihT {Salmonella typhimurium [TaxId: 90371]}
Probab=97.09  E-value=0.0024  Score=39.36  Aligned_cols=245  Identities=18%  Similarity=0.209  Sum_probs=125.1

Q ss_pred             CCE-EEEECCCCCCHHHHHHHCCCC--CCHHHHHHHHHHHEECCCCHHEEEEEECCHHHHHHCCCCCCCHHHHHH--HCC
Q ss_conf             990-999146887757878857899--986788754564100778023046434677884100048874679899--579
Q gi|254780652|r   16 GKG-ILAADESNATIQKRFKAIHLE--STENSRRDYREMLFRAKDAMQYISSILLYEETLYQNAQDGTSFVDLIS--SSG   90 (339)
Q Consensus        16 gKG-ilAaDeS~gt~~Krl~~igve--nteenr~~~R~~l~tsp~~~~~IsGvILfeeTl~q~~~~g~~~~~~l~--~kG   90 (339)
                      |+- |||.||- +++.|-|..-+..  ..++.-..++.+++..  ++.+-+| ||.+..+-+        +.++.  ..+
T Consensus        14 G~~~iLA~DqR-~~l~~m~~~~~~~~~~~~~~l~~~K~~i~~~--l~~~asa-ILlD~~yG~--------~~~~~~~~~~   81 (291)
T d1to3a_          14 GGFAMLAVDQR-EAMRLMFAAAGAKTPVADSVLTDFKVNAAKI--LSPYASA-VLLDQQFCY--------RQAVEQNAVA   81 (291)
T ss_dssp             SCEEEEECCCC-HHHHHHHHHTTCCSSCCHHHHHHHHHHHHHH--HGGGCSE-EEECTTTTH--------HHHHHTTCSC
T ss_pred             CCEEEEECCCC-HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH--HHCCCCE-EEECHHHHH--------HHHHHHCCCC
T ss_conf             98899977672-7889999984688888605788999999997--2155867-987637778--------8776401346


Q ss_pred             CEEEEEECCCEE-ECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             878994278542-1789998621578357999999854339555010002336778740888899899999999999844
Q gi|254780652|r   91 VLVGIKVDRGLK-PYPLYPGEHITVGLDDLDVRLKQYKDAGARVAKWRVVLSVSDVLPSMTVVKANMHILARYAVLCQNA  169 (339)
Q Consensus        91 IvpgIKVDkGl~-~l~g~~~e~~t~GLD~L~eR~~~y~~~Ga~faKwRaVi~i~~~~Ps~~~I~~na~~larYA~i~Q~~  169 (339)
                      .-+|+-|...-. +..+..+........--   ..+....|+.+-|-=..+.-+  .+.+    .+...+.+....|++.
T Consensus        82 ~~~~l~v~~~~~~~~~~~~~~~~~~~~~~s---v~~a~~~GadaVk~lv~~~~d--~~~e----~~~~~~~~l~~~c~~~  152 (291)
T d1to3a_          82 KSCAMIVAADDFIPGNGIPVDNVVLDKKIN---AQAVKRDGAKALKLLVLWRSD--EDAQ----QRLNMVKEFNELCHSN  152 (291)
T ss_dssp             TTSEEEEECEEEEEETTEEEEEEEECSSCC---HHHHHHTTCCEEEEEEEECTT--SCHH----HHHHHHHHHHHHHHTT
T ss_pred             CCEEEEEEECCCCCCCCCCCCCCCCCCCCC---HHHHHHCCCCEEEEEEEECCC--CCHH----HHHHHHHHHHHHHHHC
T ss_conf             764899974676467887653223456668---999974567668999863775--3189----9999999999999973


Q ss_pred             CCCCEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf             78720110110377579899999999999999999876385311100002556576444358988998777999850287
Q gi|254780652|r  170 GLVPIVEPEVLMEGDHTIERCAEVTEFVLRTLFNELYTMRVCFEGLVLKSNMILPGKSAPQVSDEEIASNTIKIFKRVVP  249 (339)
Q Consensus       170 GLVPIVEPEVl~dG~H~ie~~~~vte~vL~~lf~~L~~~~V~leg~lLKpnMv~pG~~~~~~~~eevA~~T~~~l~~~vP  249 (339)
                      |+--++||=+.-....+-+.    .........+...+.+++    ++|...+.....    ..++......+.- .  +
T Consensus       153 glp~llE~l~~~~~~~~~~~----~~~~i~~a~r~~~e~GaD----i~K~~~p~~~~~----~~~~~~~~~~~~~-~--~  217 (291)
T d1to3a_         153 GLLSIIEPVVRPPRCGDKFD----REQAIIDAAKELGDSGAD----LYKVEMPLYGKG----ARSDLLTASQRLN-G--H  217 (291)
T ss_dssp             TCEEEEEEEECCCSSCSCCC----HHHHHHHHHHHHTTSSCS----EEEECCGGGGCS----CHHHHHHHHHHHH-H--T
T ss_pred             CCCCEEEEEECCCCCCCCCC----HHHHHHHHHHHHHHCCCC----EEEEECCCCCHH----HHHHHHHHHHHHH-H--C
T ss_conf             99616898744888654443----188899999999864883----799856887205----5677899888886-0--4


Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHC
Q ss_conf             4386258605888899999989998627899805998510786378898818
Q gi|254780652|r  250 CAVQGIAFLSGGQSEQDATARLSAMNSMGDCPWRLSFSYGRALQESVLRAWN  301 (339)
Q Consensus       250 ~~VpgIvFLSGGqs~eeAt~~LnaiNk~~~~pW~lsfSygRALQ~~~Lk~W~  301 (339)
                      ..+| +|+||||-+.++-...|..-.+.+    .--|-.||++-+.++.+|.
T Consensus       218 ~~~p-~vvLs~G~~~~~f~~~l~~A~~aG----a~G~~~GR~iw~~~~~~~~  264 (291)
T d1to3a_         218 INMP-WVILSSGVDEKLFPRAVRVAMEAG----ASGFLAGRAVWSSVIGLPD  264 (291)
T ss_dssp             CCSC-EEECCTTSCTTTHHHHHHHHHHTT----CCEEEESHHHHGGGTTCSC
T ss_pred             CCCC-EEEEECCCCHHHHHHHHHHHHHCC----CEEEEECHHHHHCCCCCCC
T ss_conf             8985-899908989899999999999779----9099857464348335754


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Putative aldolase YihT
species: Salmonella typhimurium [TaxId: 90371]