HHsearch alignment for GI: 254780654 and conserved domain: COG0569

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].
Probab=94.61  E-value=0.2  Score=29.83  Aligned_cols=126  Identities=23%  Similarity=0.250  Sum_probs=70.7

Q ss_pred             EEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHH--HCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             1898856686889999999968888728999606889999998875--14412556740898365300165654211012
Q gi|254780654|r    3 CKVAINGFGRIGRCILRAAVESRRDDVRIVAINDLNSIETMAHLLR--YDSVHGRFPGEVKIIGDTIDVGLGPIQVTSIR   80 (333)
Q Consensus         3 ikIgINGfGRIGR~v~R~~~~~~~~~i~ivaINd~~~~~~~~~Ll~--yDS~hG~~~~~v~~~~~~l~in~~~i~i~~~~   80 (333)
T Consensus         1 m~iiIiG~G~vG~~va~~L~~~---g~~Vv~Id~--d~~~~~~~~~~~~~~-------~------~v~gd~t-----~~~   57 (225)
T COG0569           1 MKIIIIGAGRVGRSVARELSEE---GHNVVLIDR--DEERVEEFLADELDT-------H------VVIGDAT-----DED   57 (225)
T ss_pred             CEEEEECCCHHHHHHHHHHHHC---CCEEEEEEC--CHHHHHHHHHHCCCE-------E------EEEECCC-----CHH
T ss_conf             9899989857889999999878---990899976--889999863200044-------9------9992688-----989


Q ss_pred             CCCCCCCCCCCEEEEECCCCCC-CCCCCHHHH-CCCCEEEEECCCCCCC-EEEEEECCCCCCCCCCEEECCCCCCHHHHH
Q ss_conf             3333344656327860664333-212200110-5842343303678873-489840553212222103305764102346
Q gi|254780654|r   81 DPQDLPWGDVDVAMECTGFFVT-QEKASLHLS-NGSQRVLVSAPCKGVK-KTIVYGVNHQSLNKEDKVVSNASCTTNCLV  157 (333)
Q Consensus        81 ~p~~i~W~~vDiViEcTG~f~~-~~~~~~HL~-~GakkVIiSaP~kd~~-~tiV~GvN~~~~~~~~~IiS~aSCTtn~la  157 (333)
T Consensus        58 ~L~~agi~~aD~vva~t~~d~~N~i~~~la~~~~gv~~viar~~~~~~~~~~~~~g--------~~~ii~Pe~~~~~~l~  129 (225)
T COG0569          58 VLEEAGIDDADAVVAATGNDEVNSVLALLALKEFGVPRVIARARNPEHEKVLEKLG--------ADVIISPEKLAAKRLA  129 (225)
T ss_pred             HHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCC--------CCEEECHHHHHHHHHH
T ss_conf             99867986389999980886799999999998739984999956941677898679--------9489755899999999


Q ss_pred             HH
Q ss_conf             68
Q gi|254780654|r  158 PV  159 (333)
Q Consensus       158 Pv  159 (333)
T Consensus       130 ~~  131 (225)
T COG0569         130 RL  131 (225)
T ss_pred             HH
T ss_conf             98