HHsearch alignment for GI: 254780654 and conserved domain: PRK04308
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=91.83 E-value=1.1 Score=25.00 Aligned_cols=40 Identities=18% Similarity=0.344 Sum_probs=25.7
Q ss_pred EEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCC-CHHHHHHH
Q ss_conf 189885668688999999996888872899960688-99999988
Q gi|254780654|r 3 CKVAINGFGRIGRCILRAAVESRRDDVRIVAINDLN-SIETMAHL 46 (333)
Q Consensus 3 ikIgINGfGRIGR~v~R~~~~~~~~~i~ivaINd~~-~~~~~~~L 46 (333)
T Consensus 6 k~v~viGlG~sG~s~a~~L~~~---G~~v~-~~D~~~~~~~~~~~ 46 (445)
T PRK04308 6 KKILVAGLGGTGISMIAYLRKN---GAEVA-AYDAELKAERVAQI 46 (445)
T ss_pred CEEEEEEECHHHHHHHHHHHHC---CCEEE-EEECCCCCCHHHHH
T ss_conf 9899999899999999999978---99199-99799995318999