HHsearch alignment for GI: 254780654 and conserved domain: smart00859
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=93.05 E-value=0.23 Score=29.37 Aligned_cols=111 Identities=23% Similarity=0.247 Sum_probs=63.6
Q ss_pred EEEEEC-CCHHHHHHHHHHHHCCCCCEEEEEEC--CCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 898856-68688999999996888872899960--688999999887514412556740898365300165654211012
Q gi|254780654|r 4 KVAING-FGRIGRCILRAAVESRRDDVRIVAIN--DLNSIETMAHLLRYDSVHGRFPGEVKIIGDTIDVGLGPIQVTSIR 80 (333)
Q Consensus 4 kIgING-fGRIGR~v~R~~~~~~~~~i~ivaIN--d~~~~~~~~~Ll~yDS~hG~~~~~v~~~~~~l~in~~~i~i~~~~ 80 (333)
T Consensus 1 kVaIvGatGyvG~eli~lL~~h--p~~~~~~l~as~~~~G~~i~------~~~~~l~-------------~~~~~~~--- 56 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEH--PDFEVVALAASARSAGKRVS------EAGPHLK-------------GEVVLEL--- 56 (122)
T ss_pred CEEEECCCHHHHHHHHHHHHHC--CCCCEEEEEEECCCCCCCHH------HHCCCCC-------------CCCCCEE---
T ss_conf 9899894519999999999858--99745777740465897578------8596645-------------7735056---
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCC---CHHHHCCCCEEE-EECCC--CCCCEEEEEECCCCCC
Q ss_conf 33333446563278606643332122---001105842343-30367--8873489840553212
Q gi|254780654|r 81 DPQDLPWGDVDVAMECTGFFVTQEKA---SLHLSNGSQRVL-VSAPC--KGVKKTIVYGVNHQSL 139 (333)
Q Consensus 81 ~p~~i~W~~vDiViEcTG~f~~~~~~---~~HL~~GakkVI-iSaP~--kd~~~tiV~GvN~~~~ 139 (333)
T Consensus 57 ~~~~~~~~~~Dvvf~a~p~~~s~~~~~~~~~~~~~g~-~VIDlSadfRl~~~~~~~lPEvN~~~i 120 (122)
T smart00859 57 EPEDFEELAVDIVFLALPHGVSKEIAPLLPKAAEAGV-KVIDLSSAFRMDDDVPYGLPEVNPEAI 120 (122)
T ss_pred CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCC-EEEECCHHHCCCCCCCEECCCCCHHHH
T ss_conf 5331100179999993882788999998898875698-798684775278998669987198895