RPSBLAST alignment for GI: 254780654 and conserved domain: TIGR01532
>gnl|CDD|130595 TIGR01532, E4PD_g-proteo, D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species. Length = 325
Score = 358 bits (920), Expect = 1e-99
Identities = 159/325 (48%), Positives = 217/325 (66%), Gaps = 4/325 (1%)
Query: 4 KVAINGFGRIGRCILRAAVES-RRDDVRIVAINDLNSIETMAHLLRYDSVHGRFPGEVKI 62
+VAINGFGRIGR +LRA ES R + +VA+N+L +MAHLLRYD+ HGRFPGEVK+
Sbjct: 1 RVAINGFGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPGEVKV 60
Query: 63 IGDTIDVGLGPIQVTSIRDPQDLPWGD--VDVAMECTGFFVTQEKASLHLSNGSQRVLVS 120
GD + V I+V P+ LPW VD+ ++CTG + +E+ H+ G++RVL S
Sbjct: 61 DGDCLHVNGDCIRVLHSPTPEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFS 120
Query: 121 AP-CKGVKKTIVYGVNHQSLNKEDKVVSNASCTTNCLVPVVHVLDKMFGIEKGYMTTVHS 179
P + TIVYGVN Q L+ E +VSNASCTTNC+VP++ +LD GIE G +TT+HS
Sbjct: 121 HPGASDLDATIVYGVNQQDLSAEHTIVSNASCTTNCIVPLIKLLDDAIGIESGTITTIHS 180
Query: 180 YTGDQHVLDAGHSDLYRSRAAAISMVPTSTGAAKAVELVLPNLKGKLDGSSIRVPTPNVS 239
DQ V+DA H DL R+RAA+ S++P T A+ +E + P G+ + ++RVPT NV+
Sbjct: 181 AMNDQQVIDAYHHDLRRTRAASQSIIPVDTKLARGIERLFPEFAGRFEAIAVRVPTVNVT 240
Query: 240 MVDLKCVTSRDVNIDEINATMKYFAEGDLKNILGYVTLPLVSVDFNHTSYSSIFAADQTK 299
+DL T RDV +E+N ++ A+G L+ I+ Y LPLVS DFNH +S+I QT+
Sbjct: 241 ALDLSVTTKRDVKANEVNRVLREAAQGPLRGIVDYTELPLVSCDFNHDPHSAIVDGTQTR 300
Query: 300 VVSQNLLRVLVWYDNEWGFSNRMLD 324
V L+++LVW DNEWGF+NRMLD
Sbjct: 301 VSGPRLVKLLVWCDNEWGFANRMLD 325