RPSBLAST alignment of GI: 254780654 and protein with PDBid: 1cf2
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1 Length = 337
Score = 225 bits (575), Expect = 9e-60
Identities = 50/328 (15%), Positives = 103/328 (31%), Gaps = 28/328 (8%)
Query: 1 MVCKVAINGFGRIGRCILRAAVESRRDDVRIVAINDLN-SIETMAHLLRYDSVHGRFPGE 59
M VAING+G +G+ + A + +DD++++ ++ E L + ++ P
Sbjct: 1 MK-AVAINGYGTVGKRVADAIAQ--QDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPER 57
Query: 60 VKIIGDTIDVGLGPIQVTSIRDPQDLPWGDVDVAMECTGFFVTQEKASLHLSNGSQRVLV 119
VK+ I+V D + D+ ++CT + + ++ G + +
Sbjct: 58 VKLFEK------AGIEVAGTVDDM---LDEADIVIDCTPEGIGAKNLKMYKEKGIKAIFQ 108
Query: 120 SAPCKGVKKTIVYGVNHQSLNKEDKVVSNASCTTNCLVPVVHVLDKMFGIEKGYMTTVHS 179
+++ + SC T L + L FGI+K V
Sbjct: 109 GGEKHEDIGLSFNSLSNYEESYGKDYTRVVSCNTTGLCRTLKPLHDSFGIKKVRAVIVRR 168
Query: 180 YTGDQHVLDAGHSDLYRSRAAAISMVPTSTGAAKAV-ELVLPNLKGKLDGSSIRVPTPNV 238
S+ +++P V L +D ++ VPT +
Sbjct: 169 GADPAQ----------VSKGPINAIIPNPPKLPSHHGPDVKTVLDINIDTMAVIVPTTLM 218
Query: 239 SMVDLKCVTSRDVNIDEINATMKYFAEGDLKNILGYVTLPLVSVDFNHTSYSSIFAADQT 298
++ +D+I + + IL L S + +
Sbjct: 219 HQHNVMVEVEETPTVDDIIDVFE----DTPRVILISAEDGLTSTAEIMEYAKELGRSRND 274
Query: 299 KVVSQNLLRVLVWYDNEWGFSNRMLDTA 326
+ DNE + + +
Sbjct: 275 LFEIPVWRESITVVDNEIYYMQAVHQES 302