HHsearch alignment for GI: 254780655 and conserved domain: COG1154
>COG1154 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism].
Probab=100.00 E-value=0 Score=928.02 Aligned_cols=559 Identities=23% Similarity=0.352 Sum_probs=481.0
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECC
Q ss_conf 99887676433468888999999999999999999738897643136899999984332544577898878877998565
Q gi|254780655|r 1 MGHPVGGRNVVLMKYDDDYKKMADAIRFLSMDAIENVNSGHPGLPMGMADVVTALFTQCMVFDPQCPYWPNRDRFVLSAG 80 (673)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~l~~~a~~iR~~~~~~v~~a~~GH~g~~l~~~el~~~L~~~~~~~~~~~p~~~~rDr~v~s~G 80 (673)
T Consensus 8 i~~P~dLk~ls~----~eL~~La~EiR~~li~~vS~-~GGHlgsnLGvVELTiALH~---VF~sP------~D~~IwDVg 73 (627)
T COG1154 8 INSPADLKKLSI----EELPQLADEIREFLLEVVSA-TGGHLGSNLGVVELTIALHY---VFDSP------KDKLIWDVG 73 (627)
T ss_pred CCCHHHHHHCCH----HHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHH---HHCCC------CCCEEEECC
T ss_conf 489899864799----99999999999999998622-78864778670034477788---71798------787677567
Q ss_pred CCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 20189999999707688998898640003887988988889987306888631479999999999998534268876784
Q gi|254780655|r 81 HGSMLYYALLYLLGYQDVTIEDIKNFRTIGSKTAGHPEYGSCAGIEATTGPLGQGIANAVGMAIAERKLREEFGDVLIDH 160 (673)
Q Consensus 81 H~s~~~Y~~~~l~G~~~~~~e~l~~~r~~~s~~~Ghpe~~~~~~v~~~tG~lG~gis~a~G~A~a~k~~~~~~~~~~~d~ 160 (673)
T Consensus 74 HQa---YpHKiLTGR~----e~f~tlRq~~G-lsGf~~r~ESe~D~f~~GHsSTSiSaalG~A~A~~~~g-~------~~ 138 (627)
T COG1154 74 HQA---YPHKILTGRR----EQFDTLRQKDG-LSGFPKREESEHDWFGVGHSSTSISAALGMAKARDLKG-E------DR 138 (627)
T ss_pred CCC---CHHHHHCCCH----HHCCHHHHCCC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC-C------CC
T ss_conf 555---3067761865----53231443299-78999965677766355745878988766899887429-9------88
Q ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC---------------CCH-----------
Q ss_conf 599984362114344557887652202233069996276322322355678---------------217-----------
Q gi|254780655|r 161 YTYVLVGDGCLMEGISQEAISFAGHLGLSKLIVLWDNNGISIDGPISLADS---------------TDQ----------- 214 (673)
Q Consensus 161 ~v~~iiGDG~l~eG~~~EAl~~A~~~~l~nli~i~d~N~~si~~~~~~~~~---------------~~~----------- 214 (673)
T Consensus 139 ~vvaVIGDGAlt~GmA~EALN~ag~~~~~~~iVILNDNeMSIs~nvGal~~~L~~l~~~~~y~~~~~~~kk~l~~~~~~~ 218 (627)
T COG1154 139 NVVAVIGDGALTGGMAFEALNNAGADLKSNLIVILNDNEMSISPNVGALSKHLARLRSGPFYQSLREGGKKVLSKVGPPL 218 (627)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHH
T ss_conf 37999777633001799998533230489989998079864587754799999998626357788887799998515378
Q ss_pred -----------H------HHHHHCCCCCCC-CCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCC-CCCCCCC
Q ss_conf -----------9------988641444444-44440678888888751102210222013345557000477-1103343
Q gi|254780655|r 215 -----------Y------ARFRASGWNTLS-VNGHDHHAITSTLRKAQLSDKPTMIACETVIGFGSPNRAGT-NKVHGSA 275 (673)
Q Consensus 215 -----------~------~~~~a~Gw~~~~-vdG~d~~~i~~a~~~ak~~~kP~~I~~~T~kG~G~~~~e~~-~~~HG~~ 275 (673)
T Consensus 219 ~~~~~r~e~~~K~l~~~~~lFeelGf~YiGPiDGHni~~Li~~Lk~~kd~~gPvllHv~T~KGKGY~pAE~d~~~~H~v~ 298 (627)
T COG1154 219 KRFAKRAEESIKGLLVPGTLFEELGFNYIGPIDGHNLEELIPTLKNAKDLKGPVLLHVVTKKGKGYKPAEEDPIKYHGVG 298 (627)
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHCCHHHCCCCC
T ss_conf 99999999753025673025898187467885877899999999998537998899999658888882354965351777
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHCC
Q ss_conf 72233212566348777854389789999997543335668876424676311111002300111077630235554200
Q gi|254780655|r 276 LGQEEIKATRKALNWDLDPFFIPDDIMKKWRLAGLRSSQTRADWQERLSSMKSSIRKEFERRFSDALPDCFDNAFINLKK 355 (673)
Q Consensus 276 l~~ee~~~~~k~lg~~~~~f~ip~~v~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~e~~~~~~~~~p~~~~~~~~~~~~ 355 (673)
T Consensus 299 ------------------~f~~~~---------------------------------------tg~~~~----------- 310 (627)
T COG1154 299 ------------------PFDPIE---------------------------------------TGQSKK----------- 310 (627)
T ss_pred ------------------CCCCCC---------------------------------------CCCCCC-----------
T ss_conf ------------------877433---------------------------------------576677-----------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 00013554310134678889988655433220345556740002666344543200100325762002356787998728
Q gi|254780655|r 356 KFEHSKPMIATRKSSELVLEVVNDCLPELIGGSADLTGSNGTKTSQMKAISKSDFSGRYLHYGVREHAMAAAMNGIALHK 435 (673)
Q Consensus 356 ~~~~~~~~vatr~a~g~~l~~i~~~~p~iv~~sADl~~St~~~~~~~~~~~~~~~p~r~i~~GIaE~~~~~~aaGla~~~ 435 (673)
T Consensus 311 ---~~~~~~sys~vf~~~L~~~a~~d~~ivaITaAM~~gtGL-----~~-F~~~fP~R~fDVGIAEQHAVT~AAGlA~-~ 380 (627)
T COG1154 311 ---SKPSAPSYTKVFGDTLCELAAKDEKIVAITAAMPEGTGL-----VK-FSKKFPDRFFDVGIAEQHAVTFAAGLAA-E 380 (627)
T ss_pred ---CCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCH-----HH-HHHHCCHHHEEHHHHHHHHHHHHHHHHH-C
T ss_conf ---788888878999999999984189759983577788776-----99-9885845333023568889999999985-7
Q ss_pred CCCCEECCCHHHHHHHHHH-HHHHHHHHCCCEEECCCCCCCCCCCCCHHHHCCCCCHHHHHCCCCEEEECCHHHHHHHHH
Q ss_conf 8762200100355530012-454111100001302454333333331010002221011101221121120124577776
Q gi|254780655|r 436 GLAPYSGTFMVFSDYSRPA-IRLASLMGIRVIHVLTHDSIGLGEDGPTHQPVEHLAALRAIPDLLVLRPADSIETLECWQ 514 (673)
Q Consensus 436 g~~p~~~tf~~F~~~~~~~-ir~~al~~~~v~~v~th~gi~~G~DGpTHq~iedia~lr~iPnl~v~~P~d~~E~~~~~~ 514 (673)
T Consensus 381 G~kPvvaIYSTFLQRAYDQliHDvaiqnLPV~faIDRAGi-vG~DG~TH~G~fDls~l~~iPnmvi~aP~de~el~~ml~ 459 (627)
T COG1154 381 GMKPVVAIYSTFLQRAYDQLIHDVAIQNLPVTFAIDRAGI-VGADGPTHQGLFDLSFLRCIPNMVIMAPRDEEELRQMLY 459 (627)
T ss_pred CCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEECCCC-CCCCCCCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHH
T ss_conf 9998899923778777888999988606985999846764-589998655188899873489857866799999999999
Q ss_pred HHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 52025678349995244443345665532212347379985699729999526889999999999997399439985746
Q gi|254780655|r 515 VALKEKNRPSVLSLSRQNLPFLRTQYESNNLCALGAYDYISTPNAQVTIFSSGSELKIAVEACEILSSRNISTRVVSVPC 594 (673)
Q Consensus 515 ~al~~~~gP~~ir~~R~~~p~~~~~~~~~~~~~~G~~~~~~~~~~dv~iia~G~~v~~al~aa~~L~~~Gi~~~Vi~~~s 594 (673)
T Consensus 460 ta~~~~~gP~AiRyPrg~~~~~~~~~~-~~~~~~Gk~~i~~~-G~~vail~~G~~~~~al~vae~L~~~Gi~~TVvd~rf 537 (627)
T COG1154 460 TALAQDDGPVAIRYPRGNGVGVILTPE-LEPLEIGKGELLKE-GEKVAILAFGTMLPEALKVAEKLNAYGISVTVVDPRF 537 (627)
T ss_pred HHHHCCCCCEEEEECCCCCCCCCCCCC-CCCCCCCCEEEEEC-CCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEECCEE
T ss_conf 998647887489946888888776655-55134653688725-8808999442226899999999986398737886712
Q ss_pred CCHHCCCCHHHHHHHCCCCCEEEEECCC-----CHHHHHHHHCCCC-----CEEEE-CCCCCCCCHHHHHHHCCCCHHHH
Q ss_conf 5810008688999643679779997286-----0278999845798-----18983-57767688889999809998999
Q gi|254780655|r 595 FELFFEQSDSYRAQIIGSSPIKIAIEAG-----LRQGWDAFIGSDG-----SFIGM-QGFGASGSCDLLYQHFGINAIAI 663 (673)
Q Consensus 595 ~k~ld~~~~~~~~~il~~~~~~vtiE~g-----~~~g~~~~~~~~~-----~~igi-d~Fg~sg~~~el~~~~Gld~~~I 663 (673)
T Consensus 538 vkPlD~---~ll~~La~~h~~~vtlEe~~~~GG~Gs~v~efl~~~~~~~~v~~lglpd~fi~hg~~~el~~~~gLd~~~i 614 (627)
T COG1154 538 VKPLDE---ALLLELAKSHDLVVTLEENVVDGGFGSAVLEFLAAHGILVPVLNLGLPDEFIDHGSPEELLAELGLDAEGI 614 (627)
T ss_pred CCCCCH---HHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCHHHHHHHCCCCHHHH
T ss_conf 677799---99999986568699996373146378999999996499873377138767643699999998839998999
Q ss_pred HHHHHHHHC
Q ss_conf 999999848
Q gi|254780655|r 664 VDMVERKLS 672 (673)
Q Consensus 664 ~~~i~~~L~ 672 (673)
T Consensus 615 ~~~i~~~l~ 623 (627)
T COG1154 615 ARRILEWLK 623 (627)
T ss_pred HHHHHHHHH
T ss_conf 999999875