HHsearch alignment for GI: 254780655 and conserved domain: PRK09404

Probab=98.59  E-value=8.4e-05  Score=53.82  Aligned_cols=204  Identities=16%  Similarity=0.158  Sum_probs=106.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHCC--CCCCEECCCHHHHHHH---HHHHHHHHH----HHCCCEEECCCCCCCCCCCCCHHHH
Q ss_conf             325762002356787998728--8762200100355530---012454111----1000013024543333333310100
Q gi|254780655|r  415 LHYGVREHAMAAAMNGIALHK--GLAPYSGTFMVFSDYS---RPAIRLASL----MGIRVIHVLTHDSIGLGEDGPTHQP  485 (673)
Q Consensus       415 i~~GIaE~~~~~~aaGla~~~--g~~p~~~tf~~F~~~~---~~~ir~~al----~~~~v~~v~th~gi~~G~DGpTHq~  485 (673)
T Consensus       653 ~nS~LSE~avlgFEyGYs~~~p~~LviWEAQFGDF~NgAQiiiDqfi~s~e~KW~~~sglvllLPH-Gy-eGq-GPEHSS  729 (931)
T PRK09404        653 IDSPLSEEAVLGFEYGYSTAEPNTLVIWEAQFGDFANGAQVVIDQFISSGEQKWGRLSGLVMLLPH-GY-EGQ-GPEHSS  729 (931)
T ss_pred             EECHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCCEEEECCC-CC-CCC-CCCCCC
T ss_conf             934125777765453000258875054243314554673489750010367776101674898778-76-788-964444


Q ss_pred             --CCCCCHHHHHCCCCEEEECCHHHHHHHHHHHHCC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECC-----
Q ss_conf             --0222101110122112112012457777652025-67834999524444334566553221234737998569-----
Q gi|254780655|r  486 --VEHLAALRAIPDLLVLRPADSIETLECWQVALKE-KNRPSVLSLSRQNLPFLRTQYESNNLCALGAYDYISTP-----  557 (673)
Q Consensus       486 --iedia~lr~iPnl~v~~P~d~~E~~~~~~~al~~-~~gP~~ir~~R~~~p~~~~~~~~~~~~~~G~~~~~~~~-----  557 (673)
T Consensus       730 aR~ERfLQl~ae~N~~V~~~ttpA~~FH~LRrQ~~r~~rkPLiv~tpKsLL-R~~~~~S~~~e~~~g~F~~vi~d~~~~~  808 (931)
T PRK09404        730 ARLERFLQLCAEDNMQVCNPTTPAQYFHLLRRQVLRPFRKPLVVMTPKSLL-RHKLAVSSLEELAEGSFQPVIGDIDELD  808 (931)
T ss_pred             CCHHHHHHHCHHCCCEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCHHHH-CCCCCCCCHHHCCCCCCEEECCCCCCCC
T ss_conf             107899975302381899059879999999998503467875984736763-4854579989907994516327987688


Q ss_pred             --CCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHCCCCHHHHHHHCC---CCCEEEEE-CCC-CHHHH
Q ss_conf             --972999952688999999999999739943998574658100086889996436---79779997-286-02789
Q gi|254780655|r  558 --NAQVTIFSSGSELKIAVEACEILSSRNISTRVVSVPCFELFFEQSDSYRAQIIG---SSPIKIAI-EAG-LRQGW  627 (673)
Q Consensus       558 --~~dv~iia~G~~v~~al~aa~~L~~~Gi~~~Vi~~~s~k~ld~~~~~~~~~il~---~~~~~vti-E~g-~~~g~  627 (673)
T Consensus       809 ~~~v~rvi~CsGKvyydL~~~r~~~~~--~~vaivRiEqL~PfP~~---~l~~~l~~y~~~~~~vW~QEEp~N~GaW  880 (931)
T PRK09404        809 PKKVKRVVLCSGKVYYDLLEARRKRGI--DDVAIVRIEQLYPFPHK---ELAAELAKYPNVKEVVWCQEEPKNQGAW  880 (931)
T ss_pred             HHCCCEEEECCCHHHHHHHHHHHHCCC--CCEEEEEEHHCCCCCHH---HHHHHHHHCCCCCEEEEECCCCCCCCCH
T ss_conf             400868998276899999999997699--97799982112799789---9999998689987179965575635788