HHsearch alignment for GI: 254780655 and conserved domain: PRK12270

Probab=98.09  E-value=0.0015  Score=44.86  Aligned_cols=204  Identities=15%  Similarity=0.154  Sum_probs=110.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHCC--CCCCEECCCHHHHHHHH---HHHHHHHH----HHCCCEEECCCCCCCCCCCCCHHHH
Q ss_conf             325762002356787998728--87622001003555300---12454111----1000013024543333333310100
Q gi|254780655|r  415 LHYGVREHAMAAAMNGIALHK--GLAPYSGTFMVFSDYSR---PAIRLASL----MGIRVIHVLTHDSIGLGEDGPTHQP  485 (673)
Q Consensus       415 i~~GIaE~~~~~~aaGla~~~--g~~p~~~tf~~F~~~~~---~~ir~~al----~~~~v~~v~th~gi~~G~DGpTHq~  485 (673)
T Consensus       957 ~nS~LSE~avLGFEYGYS~~~P~~LviWEAQFGDFaNGAQvIIDQFIsSgE~KW~~~SgLVlLLPH-Gy-EGQ-GPEHSS 1033 (1234)
T PRK12270        957 YDSLLSEYAAMGFEYGYSVGNPDALVLWEAQFGDFANGAQTIIDEFISSGEAKWGQRSGVVLLLPH-GY-EGQ-GPDHSS 1033 (1234)
T ss_pred             ECCCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCEEEEEEEEECHHHHHHHHCCEEEECCC-CC-CCC-CCCCCH
T ss_conf             815213555555552443368973354065553440586489865786177766413575788678-88-889-965214


Q ss_pred             --CCCCCHHHHHCCCCEEEECCHHHHHHHHHHHH-CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECC-----
Q ss_conf             --02221011101221121120124577776520-2567834999524444334566553221234737998569-----
Q gi|254780655|r  486 --VEHLAALRAIPDLLVLRPADSIETLECWQVAL-KEKNRPSVLSLSRQNLPFLRTQYESNNLCALGAYDYISTP-----  557 (673)
Q Consensus       486 --iedia~lr~iPnl~v~~P~d~~E~~~~~~~al-~~~~gP~~ir~~R~~~p~~~~~~~~~~~~~~G~~~~~~~~-----  557 (673)
T Consensus      1034 ARiERfLQLcAe~NmqV~~pTTPAqyFHlLRRQ~~r~~RKPLIv~tPKSLL-Rh~~a~S~l~e~~~G~F~~Vi~D~~~~~ 1112 (1234)
T PRK12270       1034 ARIERFLQLCAEGNMTVAQPSTPANYFHLLRRQALSGIRRPLVVFTPKSML-RNKAAVSDVEDFTEGKFRSVIDDPTVGD 1112 (1234)
T ss_pred             HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCHHHH-CCCCCCCCHHHCCCCCCEECCCCCCCCC
T ss_conf             668999986104785999349838999999998741578886985847874-5833479978818995446168987788


Q ss_pred             --CCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHCCCCHHHHHHHCC---CCCEEEE-ECCC-CHHHH
Q ss_conf             --972999952688999999999999739943998574658100086889996436---7977999-7286-02789
Q gi|254780655|r  558 --NAQVTIFSSGSELKIAVEACEILSSRNISTRVVSVPCFELFFEQSDSYRAQIIG---SSPIKIA-IEAG-LRQGW  627 (673)
Q Consensus       558 --~~dv~iia~G~~v~~al~aa~~L~~~Gi~~~Vi~~~s~k~ld~~~~~~~~~il~---~~~~~vt-iE~g-~~~g~  627 (673)
T Consensus      1113 ~~~VkRvilCSGKvYYDL~~~R~~~~~--~dvAIvRiEQLyPfP~~~---l~~~l~~Ypna~e~vW~QEEP~N~GAW 1184 (1234)
T PRK12270       1113 PAKVKRVLLCSGKLYYDLAARREKDGR--DDVAIVRVEQLYPLPERR---LRETLARYPNAEEVFWVQEEPANQGAW 1184 (1234)
T ss_pred             HHHCCEEEEECCHHHHHHHHHHHHCCC--CCEEEEEEEECCCCCHHH---HHHHHHHCCCCCEEEEECCCCCCCCCH
T ss_conf             410838998067219999999997699--976999840028998899---999997489988689953486635778