HHsearch alignment for GI: 254780655 and conserved domain: PRK13012
>PRK13012 2-oxoacid dehydrogenase subunit E1; Provisional.
Probab=100.00 E-value=0 Score=529.12 Aligned_cols=629 Identities=22% Similarity=0.260 Sum_probs=479.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHC------CCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCHHHHHHH
Q ss_conf 88999999999999999999738------897643136899999984332544577898878877998565201899999
Q gi|254780655|r 16 DDDYKKMADAIRFLSMDAIENVN------SGHPGLPMGMADVVTALFTQCMVFDPQCPYWPNRDRFVLSAGHGSMLYYAL 89 (673)
Q Consensus 16 ~~~l~~~a~~iR~~~~~~v~~a~------~GH~g~~l~~~el~~~L~~~~~~~~~~~p~~~~rDr~v~s~GH~s~~~Y~~ 89 (673)
T Consensus 86 ~~lE~ri~~~iRWNA~amV~rAn~~~~~lGGHIstyaS~AtlyevGfNhFfrg~-~~~~--~gD-~v~fQgH~sPGiYaR 161 (898)
T PRK13012 86 LALEERLAAILRWNALAMVVRANRAYGELGGHIASYASAADLFEVGFNHFFRGR-GDAG--GGD-LVYFQPHSAPGVYAR 161 (898)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECC-CCCC--CCC-EEEECCCCCCHHHHH
T ss_conf 999999999988899999998426788867417757768999985143067468-8899--987-799758888158899
Q ss_pred HHHCCCCCCCHHHHHHHHCC--CCCCCC--CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 99707688998898640003--887988--98888998730688863147999999999999853426887678459998
Q gi|254780655|r 90 LYLLGYQDVTIEDIKNFRTI--GSKTAG--HPEYGSCAGIEATTGPLGQGIANAVGMAIAERKLREEFGDVLIDHYTYVL 165 (673)
Q Consensus 90 ~~l~G~~~~~~e~l~~~r~~--~s~~~G--hpe~~~~~~v~~~tG~lG~gis~a~G~A~a~k~~~~~~~~~~~d~~v~~i 165 (673)
T Consensus 162 afLEGR--l~e~ql~~FRqE~~g~GlsSYPHP-~lMPdfWqfPTvSMGLgpi~aIyqArf~kYL~~Rgl~~~~~~kVw~f 238 (898)
T PRK13012 162 AFLEGR--LSEAQLDHFRQEIAGPGLSSYPHP-WLMPDFWQFPTGSMGIGPINAIYQARFMRYLQNRGLKDTSGRKVWGF 238 (898)
T ss_pred HHHHCC--CCHHHHHHHHHHHCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
T ss_conf 987067--889999888876348998899986-65864467784045644889999999999998579977777708999
Q ss_pred ECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC--CCHHHHHHHCCCCCCCC---------------
Q ss_conf 4362114344557887652202233069996276322322355678--21799886414444444---------------
Q gi|254780655|r 166 VGDGCLMEGISQEAISFAGHLGLSKLIVLWDNNGISIDGPISLADS--TDQYARFRASGWNTLSV--------------- 228 (673)
Q Consensus 166 iGDG~l~eG~~~EAl~~A~~~~l~nli~i~d~N~~si~~~~~~~~~--~~~~~~~~a~Gw~~~~v--------------- 228 (673)
T Consensus 239 ~GDGEmDEPEs~gai~lA~rE~LDNLifVvNCNLQRLDGPVrGNgkIiqELE~~FrGAGWnVIKviWGs~WD~Ll~~D~~ 318 (898)
T PRK13012 239 FGDGEMDEPESIGALSLAAREGLDNLVFVINCNLQRLDGPVRGNGRIIQELEALFRGAGWNVIKVLWGSDWDALFARDTT 318 (898)
T ss_pred ECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHCCCC
T ss_conf 55876688311235556666136875999956750158873686289999998742289537997367866789725885
Q ss_pred ------------------------------------------------------CCCCHHHHHHHHHHHHH-CCCCHHHH
Q ss_conf ------------------------------------------------------44406788888887511-02210222
Q gi|254780655|r 229 ------------------------------------------------------NGHDHHAITSTLRKAQL-SDKPTMIA 253 (673)
Q Consensus 229 ------------------------------------------------------dG~d~~~i~~a~~~ak~-~~kP~~I~ 253 (673)
T Consensus 319 G~L~~~m~e~vDGdyQ~~~a~~Gay~RehFFgk~Pel~~lV~~lSDedI~~L~RGGHDp~KvYAAY~~A~~~kG~PTVIL 398 (898)
T PRK13012 319 GALARAFAETVDGQFQTFKANDGAYNREHFFGQNPELAALVAHLSDEDIDRLKRGGHDPRKVYAAYAAAVRHKGQPTVIL 398 (898)
T ss_pred CHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 77999998612507676304568899999808988999998538999999876369987999999999985679984897
Q ss_pred HCCCCCCCC-CCCCCCCCCCC-CCCCHHHHHHHHHHCCCCCC-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 013345557-00047711033-43722332125663487778-------5438978999999754333566887642467
Q gi|254780655|r 254 CETVIGFGS-PNRAGTNKVHG-SALGQEEIKATRKALNWDLD-------PFFIPDDIMKKWRLAGLRSSQTRADWQERLS 324 (673)
Q Consensus 254 ~~T~kG~G~-~~~e~~~~~HG-~~l~~ee~~~~~k~lg~~~~-------~f~ip~~v~~~~~~~~~~~~~~~~~w~~~~~ 324 (673)
T Consensus 399 AkTvKGyGlG~~gEg~N~tHQ~KKl~~d~Lk~fRdrf~iPisDe~~e~~pfy~P~~dS~E~~Yl-----------~~rR~ 467 (898)
T PRK13012 399 AKTKKGFGMGEAGQGRMTTHQQKKLDVEALKAFRDRFRLPLSDEQLEQLPFYKPAEDSPEMRYL-----------HARRA 467 (898)
T ss_pred EEEEEECCCCCHHHHCCHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHH-----------HHHHH
T ss_conf 5223325666124202124302459999999999975999885665108987989999999999-----------99999
Q ss_pred HHHHHHHHCCCCHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH---HHHHHCCCC---------CC
Q ss_conf 631111100230011107763023555420000013554310134678889988655---433220345---------55
Q gi|254780655|r 325 SMKSSIRKEFERRFSDALPDCFDNAFINLKKKFEHSKPMIATRKSSELVLEVVNDCL---PELIGGSAD---------LT 392 (673)
Q Consensus 325 ~~~~~~~~e~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~vatr~a~g~~l~~i~~~~---p~iv~~sAD---------l~ 392 (673)
T Consensus 468 ~LGG~~P~R~~~~~~l~~P~--~~~f~~~~~g--sg~r~~STTmafvR~l~~Llkdk~ig~riVPIvpDEaRTFGMe~lF 543 (898)
T PRK13012 468 ALGGYLPRRRTAADALPVPP--LSAFAQFALG--AGGKEMSTTMAFVRMLGGLLKDKALGPRIVPIVADEARTFGMANLF 543 (898)
T ss_pred HCCCCCCCCCCCCCCCCCCC--HHHHHHHHCC--CCCCCEEHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHH
T ss_conf 83898987888887789988--7899999648--8987402799999999999608265761665436721024737656
Q ss_pred CCCCCCCCCCCCCC----------CCCCHHHCCCCCCCHHHHHH--HHHHHHH--CC-CCCCEECCCHHH-HHHHHHHHH
Q ss_conf 67400026663445----------43200100325762002356--7879987--28-876220010035-553001245
Q gi|254780655|r 393 GSNGTKTSQMKAIS----------KSDFSGRYLHYGVREHAMAA--AMNGIAL--HK-GLAPYSGTFMVF-SDYSRPAIR 456 (673)
Q Consensus 393 ~St~~~~~~~~~~~----------~~~~p~r~i~~GIaE~~~~~--~aaGla~--~~-g~~p~~~tf~~F-~~~~~~~ir 456 (673)
T Consensus 544 rq~gIYs~~GQ~Y~PvD~~~l~~YkE~~~GQiLeEGInEAGa~sswiAA~TsYs~hg~pmIPfYIfYSMFGFQRvGDl~W 623 (898)
T PRK13012 544 RQVGIYSPLGQLYEPEDAGSLLYYREATDGQILEEGISEAGAISSWIAAATSYSVHGLPMLPFYIYYSMFGFQRIGDLIW 623 (898)
T ss_pred HHCCEECCCCCCCCCEEHHHHHHEEECCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHH
T ss_conf 32331278876057442211310012678722221310000589998750031127985405688766403056767998
Q ss_pred HHHHHHCCCEEECCCCCCC-C-C-----CCCCHHHHCCCCCHHHHHCCCCEEEECCHHHHHHHHHHHHCC-----CCCCE
Q ss_conf 4111100001302454333-3-3-----333101000222101110122112112012457777652025-----67834
Q gi|254780655|r 457 LASLMGIRVIHVLTHDSIG-L-G-----EDGPTHQPVEHLAALRAIPDLLVLRPADSIETLECWQVALKE-----KNRPS 524 (673)
Q Consensus 457 ~~al~~~~v~~v~th~gi~-~-G-----~DGpTHq~iedia~lr~iPnl~v~~P~d~~E~~~~~~~al~~-----~~gP~ 524 (673)
T Consensus 624 AAgD~~aRGFLlGaTAGRTTLnGEGLQHqDGHSh------llAstiPnc~sYDPafaYElavIv~~Gl~rMy~~~edvfY 697 (898)
T PRK13012 624 AAADQRARGFLLGATAGRTTLGGEGLQHQDGHSH------LAASTIPNCRAYDPAFAYELAVIVDDGMRRMYEEQEDVFY 697 (898)
T ss_pred HHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHH------HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 7421113515640256742036664456776126------8876456530047533666699999999999857986799
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCEEEEEC---CCCCEEEEECCHHHHHHHHHHHHHHHC-CCCEEEEECCCCCHHCC
Q ss_conf 99952444433456655322123473799856---997299995268899999999999973-99439985746581000
Q gi|254780655|r 525 VLSLSRQNLPFLRTQYESNNLCALGAYDYIST---PNAQVTIFSSGSELKIAVEACEILSSR-NISTRVVSVPCFELFFE 600 (673)
Q Consensus 525 ~ir~~R~~~p~~~~~~~~~~~~~~G~~~~~~~---~~~dv~iia~G~~v~~al~aa~~L~~~-Gi~~~Vi~~~s~k~ld~ 600 (673)
T Consensus 698 YiTv~NENY~qPamPeg~eeGIiKGmY~~~~~~~~~~~~VqLLGSG~Il~evi~AaeiL~~d~gV~adVWSvTSf~ELrR 777 (898)
T PRK13012 698 YLTVMNENYAQPALPEGAEEGILKGMYRLRAAAAAEAPRVQLLGSGAILREVLAAARLLADDWGVDADVWSVTSFTELRR 777 (898)
T ss_pred EEEECCCCCCCCCCCCCCHHHHHHCCEECCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHH
T ss_conf 98404646658688997477686310442336778995389992569999999999999984298620672488899998
Q ss_pred ----------------CCHHHHHHHCCCC-CEEEEECCC---CHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCCH
Q ss_conf ----------------8688999643679-779997286---02789998457981898357767688889999809998
Q gi|254780655|r 601 ----------------QSDSYRAQIIGSS-PIKIAIEAG---LRQGWDAFIGSDGSFIGMQGFGASGSCDLLYQHFGINA 660 (673)
Q Consensus 601 ----------------~~~~~~~~il~~~-~~~vtiE~g---~~~g~~~~~~~~~~~igid~Fg~sg~~~el~~~~Gld~ 660 (673)
T Consensus 778 da~~~eR~N~LhP~~~~r~syv~~~L~~~~gPvVAaSDYmra~pdqIr~~vp~~y~vLGTDGFGRSDTR~~LR~fFEVDa 857 (898)
T PRK13012 778 DGLAAERANLLGPAEEPRVPYVTQCLAGTRGPVIAATDYVRAVPEQIRAFVPRRYVTLGTDGFGRSDTRAALRRFFEVDR 857 (898)
T ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCEEEECHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHCCCCH
T ss_conf 79999999840998777777899983799998799677687649999984689865635888875425799998746378
Q ss_pred HHHHHHHHHHHC
Q ss_conf 999999999848
Q gi|254780655|r 661 IAIVDMVERKLS 672 (673)
Q Consensus 661 ~~I~~~i~~~L~ 672 (673)
T Consensus 858 ~~IVvAaL~aLa 869 (898)
T PRK13012 858 HSIVLAALKALA 869 (898)
T ss_pred HHHHHHHHHHHH
T ss_conf 899999999999