HHsearch alignment for GI: 254780655 and conserved domain: TIGR00759

>TIGR00759 aceE 2-oxo-acid dehydrogenase E1 component, homodimeric type; InterPro: IPR004660 Most members of this family are pyruvate dehydrogenase complex, E1 component. It includes a counterexample from Pseudomonas putida, MdeB, that is active as an E1 component of an alpha-ketoglutarate dehydrogenase complex rather than a pyruvate dehydrogenase complex. The second pyruvate dehydrogenase complex E1 protein from Alcaligenes eutrophus, PdhE, complements an aceE mutant of Escherichia coli but is not part of a pyruvate dehydrogenase complex operon, is more similar to the Pseudomonas putida MdeB than to E. coli AceE, and may have also have a different primary specificity. ; GO: 0016491 oxidoreductase activity.
Probab=100.00  E-value=0  Score=576.81  Aligned_cols=635  Identities=22%  Similarity=0.266  Sum_probs=489.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHC------CCCCCCCCCHHHHHHHHHHHHEEECCCCCCC-CCCCEEEEECCCCHHHHH
Q ss_conf             888999999999999999999738------8976431368999999843325445778988-788779985652018999
Q gi|254780655|r   15 YDDDYKKMADAIRFLSMDAIENVN------SGHPGLPMGMADVVTALFTQCMVFDPQCPYW-PNRDRFVLSAGHGSMLYY   87 (673)
Q Consensus        15 ~~~~l~~~a~~iR~~~~~~v~~a~------~GH~g~~l~~~el~~~L~~~~~~~~~~~p~~-~~rDr~v~s~GH~s~~~Y   87 (673)
T Consensus        71 D~elErRIRs~~RWNA~aMV~RA~kk~~~~GGHistyaSaA~lyeVGFNHFFRg~~-~~~~Gr~gD-LVF~QGHaaPG~Y  148 (905)
T TIGR00759        71 DLELERRIRSIIRWNAIAMVLRANKKDLDLGGHISTYASAATLYEVGFNHFFRGKS-EGEGGRGGD-LVFFQGHAAPGIY  148 (905)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC-CCCCCCCCC-EEEECCCCCCHHH
T ss_conf             54577888778879999999874078888653076899999997211133402688-888884344-3467887671378


Q ss_pred             HHHHHCCCCCCCHHHHHHHHCC----CCCCCC--CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
Q ss_conf             9999707688998898640003----887988--9888899873068886314799999999999985342688767845
Q gi|254780655|r   88 ALLYLLGYQDVTIEDIKNFRTI----GSKTAG--HPEYGSCAGIEATTGPLGQGIANAVGMAIAERKLREEFGDVLIDHY  161 (673)
Q Consensus        88 ~~~~l~G~~~~~~e~l~~~r~~----~s~~~G--hpe~~~~~~v~~~tG~lG~gis~a~G~A~a~k~~~~~~~~~~~d~~  161 (673)
T Consensus       149 ARAFLEGR--Lt~~QLd~FRQE~~~~G~GLsSYPHP~L-MPdFWqFPTVSMGLGPi~AIYQARF~kYL~~RGlk~~~d~~  225 (905)
T TIGR00759       149 ARAFLEGR--LTEEQLDNFRQEVSHVGDGLSSYPHPWL-MPDFWQFPTVSMGLGPINAIYQARFLKYLENRGLKDTSDQK  225 (905)
T ss_pred             HHHHHHCC--CCHHHHHCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCE
T ss_conf             99854215--6688860215101557758887556778-84404698765664145799998987765404774202775


Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC--CCCCHHHHHHHCCCCCCCC-----------
Q ss_conf             999843621143445578876522022330699962763223223556--7821799886414444444-----------
Q gi|254780655|r  162 TYVLVGDGCLMEGISQEAISFAGHLGLSKLIVLWDNNGISIDGPISLA--DSTDQYARFRASGWNTLSV-----------  228 (673)
Q Consensus       162 v~~iiGDG~l~eG~~~EAl~~A~~~~l~nli~i~d~N~~si~~~~~~~--~~~~~~~~~~a~Gw~~~~v-----------  228 (673)
T Consensus       226 VwaFLGDGEMDEPES~Ga~~~AarE~LDNL~FviNCNLQRLDGPVrGNGKIIQELEslF~GAGWNVIKV~WGS~WD~Ll~  305 (905)
T TIGR00759       226 VWAFLGDGEMDEPESKGAITFAAREKLDNLVFVINCNLQRLDGPVRGNGKIIQELESLFRGAGWNVIKVLWGSEWDALLA  305 (905)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHH
T ss_conf             89984787557187799987665523754178863213036875415741201124312688831788840885689987


Q ss_pred             ----------------------------------------------------------CCCCHHHHHHHHHHHHHC-CCC
Q ss_conf             ----------------------------------------------------------444067888888875110-221
Q gi|254780655|r  229 ----------------------------------------------------------NGHDHHAITSTLRKAQLS-DKP  249 (673)
Q Consensus       229 ----------------------------------------------------------dG~d~~~i~~a~~~ak~~-~kP  249 (673)
T Consensus       306 ~D~~G~L~~~m~~~vDG~yQT~kA~DGaY~REHFFn~~Pel~ALV~dmsD~dIw~LnRGGHD~~K~YAAy~~A~~~KG~P  385 (905)
T TIGR00759       306 RDTSGVLVKLMNETVDGDYQTYKAKDGAYVREHFFNRTPELKALVADMSDADIWALNRGGHDPRKVYAAYAAAQEHKGKP  385 (905)
T ss_pred             HCCCCHHHHHHHHCCCCCEEECCCCCCCEECCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf             15133789998525897300000268863104346888789998616787899974067997388999999986289984


Q ss_pred             HHHHHCCCCCCCCC-CCCCCCCCCC-CCCCHHHHHHHHHHCCCCCCCCCCCHHHHHH----HHHHHHHHHHHHHHH----
Q ss_conf             02220133455570-0047711033-4372233212566348777854389789999----997543335668876----
Q gi|254780655|r  250 TMIACETVIGFGSP-NRAGTNKVHG-SALGQEEIKATRKALNWDLDPFFIPDDIMKK----WRLAGLRSSQTRADW----  319 (673)
Q Consensus       250 ~~I~~~T~kG~G~~-~~e~~~~~HG-~~l~~ee~~~~~k~lg~~~~~f~ip~~v~~~----~~~~~~~~~~~~~~w----  319 (673)
T Consensus       386 TvILAkTiKGYg~g~~~e~rN~AHQ~KKl~~~~lk~fRD~f~lPls-----D~QvE~nPy~l~Yy~p~e~s~E~~Yl~~~  460 (905)
T TIGR00759       386 TVILAKTIKGYGLGDAAEARNVAHQVKKLEVDALKEFRDRFELPLS-----DAQVEKNPYLLPYYHPGEGSPEVRYLRAR  460 (905)
T ss_pred             EEEECCCCCCCCCCHHHHHCCHHHHHCCCCHHHHHHHHHHCCCCCC-----HHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             7860543466467643322013553056687889842000248877-----67773078768731388877778999999


Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHHH---HHHHHCCC------
Q ss_conf             424676311111002300111077630235554200000135-54310134678889988655---43322034------
Q gi|254780655|r  320 QERLSSMKSSIRKEFERRFSDALPDCFDNAFINLKKKFEHSK-PMIATRKSSELVLEVVNDCL---PELIGGSA------  389 (673)
Q Consensus       320 ~~~~~~~~~~~~~e~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~vatr~a~g~~l~~i~~~~---p~iv~~sA------  389 (673)
T Consensus       461 R~~LgG~~P~Rr~k----~~~~L~vP~l~~f~~l~~~~--~~G~evSTTMA~VR~l~~lLkdK~IG~~iVPIvpDEARTF  534 (905)
T TIGR00759       461 RQALGGYLPARRTK----FAEKLTVPALEVFGALLKGS--GEGREVSTTMAFVRILNELLKDKEIGKRIVPIVPDEARTF  534 (905)
T ss_pred             HHHCCCCCCCCCCC----CCCCCCCCCHHHHHHHHHHC--CCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC
T ss_conf             97438855665777----75566798567889998607--8887111688999999997237787886632206744412


Q ss_pred             ---CCCCCCCCCCCCCCCCCCCC----------CHHHCCCCCCCHHHHHH--HHHHHH--HCC-CCCCEECCCHHH-HHH
Q ss_conf             ---55567400026663445432----------00100325762002356--787998--728-876220010035-553
Q gi|254780655|r  390 ---DLTGSNGTKTSQMKAISKSD----------FSGRYLHYGVREHAMAA--AMNGIA--LHK-GLAPYSGTFMVF-SDY  450 (673)
Q Consensus       390 ---Dl~~St~~~~~~~~~~~~~~----------~p~r~i~~GIaE~~~~~--~aaGla--~~~-g~~p~~~tf~~F-~~~  450 (673)
T Consensus       535 GM~~LFrqiGIYsp~GQ~Y~P~D~~~l~~YkEs~~GQ~L~EGInEaGA~~SWiAAaTSYa~hg~PMIPfYIyYSMFGfQR  614 (905)
T TIGR00759       535 GMEGLFRQIGIYSPNGQKYTPEDADSLLAYKESKDGQILQEGINEAGAMASWIAAATSYATHGEPMIPFYIYYSMFGFQR  614 (905)
T ss_pred             CHHHCCCCCCEECCCCCEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHH
T ss_conf             50221374530578987451034334677645026854131055676777799986456554876541577302764015


Q ss_pred             HHHHHHHHHHHHCCCEEECCCCCCC-C-C-----CCCCHH-HHCCCCCHHHHHCCCCEEEECCHHHHHHHHHHHHCCC--
Q ss_conf             0012454111100001302454333-3-3-----333101-0002221011101221121120124577776520256--
Q gi|254780655|r  451 SRPAIRLASLMGIRVIHVLTHDSIG-L-G-----EDGPTH-QPVEHLAALRAIPDLLVLRPADSIETLECWQVALKEK--  520 (673)
Q Consensus       451 ~~~~ir~~al~~~~v~~v~th~gi~-~-G-----~DGpTH-q~iedia~lr~iPnl~v~~P~d~~E~~~~~~~al~~~--  520 (673)
T Consensus       615 iGDl~WAAADQ~ARGFllGaTAGRTTL~GEGLQH~DGhSl~~~~-------~~Pnc~~YDPaFAyEvAVI~~~Gl~RMy~  687 (905)
T TIGR00759       615 IGDLCWAAADQRARGFLLGATAGRTTLNGEGLQHEDGHSLVQAA-------TIPNCIAYDPAFAYEVAVIMEDGLRRMYG  687 (905)
T ss_pred             HHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCHHHHHHHH-------HCCCCEECCCCHHHHHHHHHHHHHHHHCC
T ss_conf             77899988865320000023424300035664100036788973-------53743101751023367878778973236


Q ss_pred             ----CCCEEEEECCCCC--CCCCCC---CCCCCCCCCCCEEEEEC----CCCCEEEEECCHHHHHHHHHHHHHHHC-CCC
Q ss_conf             ----7834999524444--334566---55322123473799856----997299995268899999999999973-994
Q gi|254780655|r  521 ----NRPSVLSLSRQNL--PFLRTQ---YESNNLCALGAYDYIST----PNAQVTIFSSGSELKIAVEACEILSSR-NIS  586 (673)
Q Consensus       521 ----~gP~~ir~~R~~~--p~~~~~---~~~~~~~~~G~~~~~~~----~~~dv~iia~G~~v~~al~aa~~L~~~-Gi~  586 (673)
T Consensus       688 E~qed~FyY~Tv~NE~y~~P~mP~~lsh~~~~~gi~kG~Yrf~~~~~~~~~~~vQLLgSG~i~r~v~~Aa~lLa~DyGV~  767 (905)
T TIGR00759       688 EKQEDVFYYVTVLNENYVQPPMPEGLSHEEAEEGILKGLYRFETATEEKAKGRVQLLGSGAIMREVIEAAELLAADYGVA  767 (905)
T ss_pred             CCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCE
T ss_conf             67442247664505788878887243534426777740344100001047871367524568999999999987517831


Q ss_pred             EEEEECCCCCHHCCC----------------CHHHHHHHCCC-CCE--EEEECCCC---HHHHHHHHC-CCCCEEEECCC
Q ss_conf             399857465810008----------------68899964367-977--99972860---278999845-79818983577
Q gi|254780655|r  587 TRVVSVPCFELFFEQ----------------SDSYRAQIIGS-SPI--KIAIEAGL---RQGWDAFIG-SDGSFIGMQGF  643 (673)
Q Consensus       587 ~~Vi~~~s~k~ld~~----------------~~~~~~~il~~-~~~--~vtiE~g~---~~g~~~~~~-~~~~~igid~F  643 (673)
T Consensus       768 sDvwSvtSf~ELaRdg~dv~R~nlLHP~e~~~vsyVA~~L~~~~aPGv~iA~tDYvra~a~qir~~VP~~~Y~tLGTDGF  847 (905)
T TIGR00759       768 SDVWSVTSFTELARDGHDVERWNLLHPTETPRVSYVAQVLNEADAPGVVIASTDYVRAFAEQIRPYVPARKYVTLGTDGF  847 (905)
T ss_pred             EEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCHHHHCHHHHHHCCCCCCCEEECCCCC
T ss_conf             45520587567656789998864258788887648989741279980699852212303576631278877368315788


Q ss_pred             CCCCCHHHHHHHCCCCHHHHHHHHHHHHC
Q ss_conf             67688889999809998999999999848
Q gi|254780655|r  644 GASGSCDLLYQHFGINAIAIVDMVERKLS  672 (673)
Q Consensus       644 g~sg~~~el~~~~Gld~~~I~~~i~~~L~  672 (673)
T Consensus       848 GRSDtR~~LR~fFEVD~~~VVlA~L~aLa  876 (905)
T TIGR00759       848 GRSDTRENLRHFFEVDAKSVVLAALEALA  876 (905)
T ss_pred             CHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             60168998764411055057788899998