HHsearch alignment for GI: 254780655 and conserved domain: TIGR03181
>TIGR03181 PDH_E1_alph_x pyruvate dehydrogenase E1 component, alpha subunit. Members of this protein family are the alpha subunit of the E1 component of pyruvate dehydrogenase (PDH). This model represents one branch of a larger family that E1-alpha proteins from 2-oxoisovalerate dehydrogenase, acetoin dehydrogenase, another PDH clade, etc.
Probab=99.89 E-value=4.8e-21 Score=171.39 Aligned_cols=172 Identities=24% Similarity=0.226 Sum_probs=127.4
Q ss_pred CEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77998565201899999997076889988986400038879889888899873068886314799999999999985342
Q gi|254780655|r 73 DRFVLSAGHGSMLYYALLYLLGYQDVTIEDIKNFRTIGSKTAGHPEYGSCAGIEATTGPLGQGIANAVGMAIAERKLREE 152 (673)
Q Consensus 73 Dr~v~s~GH~s~~~Y~~~~l~G~~~~~~e~l~~~r~~~s~~~Ghpe~~~~~~v~~~tG~lG~gis~a~G~A~a~k~~~~~ 152 (673)
T Consensus 76 D~i~--~~yR~---hg~~la~G---~~~~~~~a--e~~G~~~G~~-~~~~~~~~~~~~iVG~~~p~A~G~A~a~k~~~~- 143 (341)
T TIGR03181 76 DWVF--PSYRD---HAAMLARG---VPLVEILL--YWRGDERGSW-DPEGVNILPPNIPIGTQYLHAAGVAYALKLRGE- 143 (341)
T ss_pred CEEE--ECCCC---HHHHEECC---CCHHHHHH--HHCCCCCCCC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC-
T ss_conf 9897--15672---36331279---98999999--8559776788-860147688874013465414778889987299-
Q ss_pred CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC-CCHHHHHHHCCCCCCCCCCC
Q ss_conf 68876784599984362114344557887652202233069996276322322355678-21799886414444444444
Q gi|254780655|r 153 FGDVLIDHYTYVLVGDGCLMEGISQEAISFAGHLGLSKLIVLWDNNGISIDGPISLADS-TDQYARFRASGWNTLSVNGH 231 (673)
Q Consensus 153 ~~~~~~d~~v~~iiGDG~l~eG~~~EAl~~A~~~~l~nli~i~d~N~~si~~~~~~~~~-~~~~~~~~a~Gw~~~~vdG~ 231 (673)
T Consensus 144 ------~~V~v~ffGDGA~~eG~fhEalN~Aa~~~L-PviFv~eNN~yaist~~~~~~~~~~i~~ra~~yGi~~~~vDG~ 216 (341)
T TIGR03181 144 ------DNVAVTYFGDGGTSEGDFYEALNFAGVFKA-PVVFFVQNNQWAISVPRSKQTAAPTLAQKAIAYGIPGVQVDGN 216 (341)
T ss_pred ------CCEEEEEECCCCCCCCHHHHHHHHHHHHCC-CEEEEEEECCCCCCCCHHHHCCCCHHHHHHHHCCCCEEECCCC
T ss_conf ------988999946886432469999999998389-9899996177357776334237736987514249886744885
Q ss_pred CHHHHHHHHHH----HHHCCCCHHHHHCCCCCCCCC
Q ss_conf 06788888887----511022102220133455570
Q gi|254780655|r 232 DHHAITSTLRK----AQLSDKPTMIACETVIGFGSP 263 (673)
Q Consensus 232 d~~~i~~a~~~----ak~~~kP~~I~~~T~kG~G~~ 263 (673)
T Consensus 217 D~~av~~a~~~Av~~~R~g~gP~liE~~TyR~~gHs 252 (341)
T TIGR03181 217 DVLAVYAVTKEAVERARSGGGPTLIEAVTYRLGPHT 252 (341)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC
T ss_conf 679999999999999855899889999850278867