HHsearch alignment for GI: 254780655 and conserved domain: TIGR03393
>TIGR03393 indolpyr_decarb indolepyruvate decarboxylase, Erwinia family. A family of closely related, thiamine pyrophosphate-dependent enzymes includes indolepyruvate decarboxylase (EC 4.1.1.74), phenylpyruvate decarboxylase (EC 4.1.1.43), pyruvate decarboxylase (EC 4.1.1.1), branched-chain alpha-ketoacid decarboxylase, etc.. Members of this group of homologs may overlap in specificity. Within the larger family, this model represents a clade of bacterial indolepyruvate decarboxylases, part of a pathway for biosynthesis of the plant hormone indole-3-acetic acid. Typically, these species interact with plants, as pathogens or as beneficial, root-associated bacteria.
Probab=99.01 E-value=1.5e-09 Score=88.27 Aligned_cols=105 Identities=10% Similarity=0.070 Sum_probs=48.8
Q ss_pred HHHHHHCCCCCCEECCC--HHHHHHHHHHHHHHHHHHCCCEEEC-CCCCCCC--CCCCCHHHHCCCCCH--H----HHH-
Q ss_conf 87998728876220010--0355530012454111100001302-4543333--333310100022210--1----110-
Q gi|254780655|r 428 MNGIALHKGLAPYSGTF--MVFSDYSRPAIRLASLMGIRVIHVL-THDSIGL--GEDGPTHQPVEHLAA--L----RAI- 495 (673)
Q Consensus 428 aaGla~~~g~~p~~~tf--~~F~~~~~~~ir~~al~~~~v~~v~-th~gi~~--G~DGpTHq~iedia~--l----r~i- 495 (673)
T Consensus 413 AIGA~lA~P~r~Vv~i~GDG~f~m-~~~EL~Tavr~~lpi~~vV~NN~~yg~~r~~~~~~~~-~~~~~~~~~~~~a~a~g 490 (539)
T TIGR03393 413 AFGAQTACPNRRVILLIGDGSAQL-TIQELGSMLRDKQHPIILVLNNEGYTVERAIHGAEQR-YNDIALWNWTHLPQALS 490 (539)
T ss_pred HHHHHHHCCCCCEEEEECCHHHHH-HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCC-CCCCCCCCHHHHHHHCC
T ss_conf 999998398994899984058776-3999999998198968999978823899887447766-67788899789999769
Q ss_pred --CCCCEEEECCHHHHHHHHHHHHCCCCCCEEEE--ECCCCCCC
Q ss_conf --12211211201245777765202567834999--52444433
Q gi|254780655|r 496 --PDLLVLRPADSIETLECWQVALKEKNRPSVLS--LSRQNLPF 535 (673)
Q Consensus 496 --Pnl~v~~P~d~~E~~~~~~~al~~~~gP~~ir--~~R~~~p~ 535 (673)
T Consensus 491 ~~g~~~~~rV~~~~eL~~al~~a~~~-~~P~lIeV~v~~~~~pp 533 (539)
T TIGR03393 491 LDPQSECWRVSEAEQLADVLEKVAAH-ERLSLIEVVLPKADIPP 533 (539)
T ss_pred CCCCCCEEEECCHHHHHHHHHHHHHC-CCCEEEEEECCCCCCCC
T ss_conf 98862248868999999999999867-99789999857455885