HHsearch alignment for GI: 254780655 and conserved domain: cd02000

>cd02000 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC). PDC catalyzes the irreversible oxidative decarboxylation of pyruvate to produce acetyl-CoA in the bridging step between glycolysis and the citric acid cycle. ADC participates in the breakdown of acetoin while BCADC participates in the breakdown of branched chain amino acids. BCADC catalyzes the oxidative decarboxylation of 4-methyl-2-oxopentanoate, 3-methyl-2-oxopentanoate and 3-methyl-2-oxobutanoate (branched chain 2-oxo acids derived from the transamination of leucine, valine and isoleucine).
Probab=99.87  E-value=2.2e-20  Score=166.68  Aligned_cols=173  Identities=25%  Similarity=0.286  Sum_probs=129.0

Q ss_pred             CEEEEECCCCHHHHHHHHHHCCCCCCCHHHHH-HH-HCCCCCC-----CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             77998565201899999997076889988986-40-0038879-----88988889987306888631479999999999
Q gi|254780655|r   73 DRFVLSAGHGSMLYYALLYLLGYQDVTIEDIK-NF-RTIGSKT-----AGHPEYGSCAGIEATTGPLGQGIANAVGMAIA  145 (673)
Q Consensus        73 Dr~v~s~GH~s~~~Y~~~~l~G~~~~~~e~l~-~~-r~~~s~~-----~Ghpe~~~~~~v~~~tG~lG~gis~a~G~A~a  145 (673)
T Consensus        49 D~-~~-~~yR~---~~~~la~G~---~~~~~~~e~~g~~~g~~~Gr~gs~H~~-~~~~~~~~~~~~vg~~~p~a~G~A~a  119 (293)
T cd02000          49 DW-VF-PTYRD---HGHALARGV---DLKEMLAELFGKETGPCKGRGGSMHIG-DKEKNFFGGNGIVGGQVPLAAGAALA  119 (293)
T ss_pred             CE-EE-ECCCH---HHHHHHHCC---CHHHHHHHHHCCCCCCCCCCCCCCCCC-CCCCCEECCCCCCCCCCCHHHHHHHH
T ss_conf             98-98-14520---899999099---999999998257778888888868588-71020504654124663347767899


Q ss_pred             HHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC-CCHHHHHHHCCCC
Q ss_conf             998534268876784599984362114344557887652202233069996276322322355678-2179988641444
Q gi|254780655|r  146 ERKLREEFGDVLIDHYTYVLVGDGCLMEGISQEAISFAGHLGLSKLIVLWDNNGISIDGPISLADS-TDQYARFRASGWN  224 (673)
Q Consensus       146 ~k~~~~~~~~~~~d~~v~~iiGDG~l~eG~~~EAl~~A~~~~l~nli~i~d~N~~si~~~~~~~~~-~~~~~~~~a~Gw~  224 (673)
T Consensus       120 ~k~~~~-------~~v~v~~~GDGa~~~G~f~EalN~A~~~~L-Pvlfv~enN~yaist~~~~~~~~~~~~~r~~~~gi~  191 (293)
T cd02000         120 LKYRGE-------DRVAVCFFGDGATNEGDFHEALNFAALWKL-PVIFVCENNGYAISTPTSRQTAGTSIADRAAAYGIP  191 (293)
T ss_pred             HHHHCC-------CCEEEEEECCCCCCCCHHHHHHHHHHHCCC-CEEEEEEECCEECCCCHHHHCCCCCHHHHHHHCCCC
T ss_conf             997589-------988999716874551479999998865379-879999748730235688732774487735326987


Q ss_pred             CCCCCCCCHHHHHHHHHH----HHHCCCCHHHHHCCCCCCCC
Q ss_conf             444444406788888887----51102210222013345557
Q gi|254780655|r  225 TLSVNGHDHHAITSTLRK----AQLSDKPTMIACETVIGFGS  262 (673)
Q Consensus       225 ~~~vdG~d~~~i~~a~~~----ak~~~kP~~I~~~T~kG~G~  262 (673)
T Consensus       192 ~~~vDG~D~~~v~~~~~~Ai~~~R~~~gP~lie~~TyR~~gH  233 (293)
T cd02000         192 GIRVDGNDVLAVYEAAKEAVERARAGGGPTLIEAVTYRLGGH  233 (293)
T ss_pred             EEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC
T ss_conf             699748789999999999999985389988999985616755