HHsearch alignment for GI: 254780655 and conserved domain: cd02004
>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL). Pseudomonas fluorescens biovar I BZL cleaves the acyloin linkage of benzoin producing 2 molecules of benzaldehyde and enabling the Pseudomonas to grow on benzoin as the sole carbon and energy source. OCoD has a role in the detoxification of oxalate, catalyzing the decarboxylation of oxalyl-CoA to formate. 2-HPCL is a peroxisomal enzyme which plays a role in the alpha-oxidation of 3-methyl-branched fatty acids, catalyzing the cleavage of 2-hydroxy-3-methylacyl-CoA into formyl-CoA and a 2-methyl-branched fatty aldehyde. All these enzymes depend on Mg2+ and TPP for activity.
Probab=99.07 E-value=5.9e-10 Score=91.11 Aligned_cols=114 Identities=25% Similarity=0.278 Sum_probs=88.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC---
Q ss_conf 88863147999999999999853426887678459998436211434455788765220223306999627632232---
Q gi|254780655|r 128 TTGPLGQGIANAVGMAIAERKLREEFGDVLIDHYTYVLVGDGCLMEGISQEAISFAGHLGLSKLIVLWDNNGISIDG--- 204 (673)
Q Consensus 128 ~tG~lG~gis~a~G~A~a~k~~~~~~~~~~~d~~v~~iiGDG~l~eG~~~EAl~~A~~~~l~nli~i~d~N~~si~~--- 204 (673)
T Consensus 46 ~~g~mG~~lpaaiGa~lA~p-----------~~~Vv~i~GDG~f~--m~~~EL~Ta~~~~lpi~~iV~nN~~~~~i~~~q 112 (172)
T cd02004 46 TFGTLGVGLGYAIAAALARP-----------DKRVVLVEGDGAFG--FSGMELETAVRYNLPIVVVVGNNGGWYQGLDGQ 112 (172)
T ss_pred CCCHHHHHHHHHHHHHHHCC-----------CCEEEEEECCCCHH--CCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHH
T ss_conf 87647779999999999789-----------98499997797340--240788899984988599998288328999998
Q ss_pred -------C--CCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCC
Q ss_conf -------2--355678217998864144444444440678888888751102210222013
Q gi|254780655|r 205 -------P--ISLADSTDQYARFRASGWNTLSVNGHDHHAITSTLRKAQLSDKPTMIACET 256 (673)
Q Consensus 205 -------~--~~~~~~~~~~~~~~a~Gw~~~~vdG~d~~~i~~a~~~ak~~~kP~~I~~~T 256 (673)
T Consensus 113 ~~~~~~~~~~~~~~~~~df~~iA~a~G~~~~~v~--~~~el~~al~~a~~~~~p~liev~i 171 (172)
T cd02004 113 QLSYGLGLPVTTLLPDTRYDLVAEAFGGKGELVT--TPEELKPALKRALASGKPALINVII 171 (172)
T ss_pred HHHHCCCCCCEECCCCCCHHHHHHHCCCEEEEEC--CHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 9872689874321899877899997598289978--9999999999999589969999981