HHsearch alignment for GI: 254780655 and conserved domain: cd02017
>cd02017 TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) family, E1 of E. coli PDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the Escherichia coli pyruvate dehydrogenase multienzyme complex (PDC). PDC catalyzes the oxidative decarboxylation of pyruvate and the subsequent acetylation of coenzyme A to acetyl-CoA. The E1 component of PDC catalyzes the first step of the multistep process, using TPP and a divalent cation as cofactors. E. coli PDC is a homodimeric enzyme.
Probab=100.00 E-value=0 Score=426.60 Aligned_cols=270 Identities=27% Similarity=0.326 Sum_probs=239.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHC------CCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 8999999999999999999738------8976431368999999843325445778988788779985652018999999
Q gi|254780655|r 17 DDYKKMADAIRFLSMDAIENVN------SGHPGLPMGMADVVTALFTQCMVFDPQCPYWPNRDRFVLSAGHGSMLYYALL 90 (673)
Q Consensus 17 ~~l~~~a~~iR~~~~~~v~~a~------~GH~g~~l~~~el~~~L~~~~~~~~~~~p~~~~rDr~v~s~GH~s~~~Y~~~ 90 (673)
T Consensus 2 e~E~ri~~~~rwna~~~v~ra~~~~~~vGGH~as~aS~ati~~v~~~h~~r~~---~~~~~~D~-V~~qgHasP~~yA~~ 77 (386)
T cd02017 2 EIERRIRSLIRWNAMAMVHRANKKDLGIGGHIATFASAATLYEVGFNHFFRAR---GEGGGGDL-VYFQGHASPGIYARA 77 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC---CCCCCCCE-EEECCCCCHHHHHHH
T ss_conf 58999999999999999984557889878806608989999999878875688---88998887-886687678999999
Q ss_pred HHCCCCCCCHHHHHHHHCCC--CCCCCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
Q ss_conf 97076889988986400038--8798898888998-73068886314799999999999985342688767845999843
Q gi|254780655|r 91 YLLGYQDVTIEDIKNFRTIG--SKTAGHPEYGSCA-GIEATTGPLGQGIANAVGMAIAERKLREEFGDVLIDHYTYVLVG 167 (673)
Q Consensus 91 ~l~G~~~~~~e~l~~~r~~~--s~~~Ghpe~~~~~-~v~~~tG~lG~gis~a~G~A~a~k~~~~~~~~~~~d~~v~~iiG 167 (673)
T Consensus 78 ~L~Gr--l~~e~L~~fR~e~~~~Gl~syP~p~~~p~~~~f~TgSmGlG~~~ai~~A~~~rYl~~rg~~~~~~~rv~~~~G 155 (386)
T cd02017 78 FLEGR--LTEEQLDNFRQEVGGGGLSSYPHPWLMPDFWEFPTVSMGLGPIQAIYQARFNRYLEDRGLKDTSDQKVWAFLG 155 (386)
T ss_pred HHHCC--CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC
T ss_conf 98379--9989997650335799888999988898502167777773689999999999999864888877773899962
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC--CCCCHHHHHHHCCCCCCCC-----------------
Q ss_conf 621143445578876522022330699962763223223556--7821799886414444444-----------------
Q gi|254780655|r 168 DGCLMEGISQEAISFAGHLGLSKLIVLWDNNGISIDGPISLA--DSTDQYARFRASGWNTLSV----------------- 228 (673)
Q Consensus 168 DG~l~eG~~~EAl~~A~~~~l~nli~i~d~N~~si~~~~~~~--~~~~~~~~~~a~Gw~~~~v----------------- 228 (673)
T Consensus 156 DgEldEg~~~eAi~~a~~~~LdNL~~vvd~N~Q~LDgpV~gn~kiiqele~~F~~aGW~VIkv~wG~~wd~lf~~d~~g~ 235 (386)
T cd02017 156 DGEMDEPESLGAIGLAAREKLDNLIFVVNCNLQRLDGPVRGNGKIIQELEGIFRGAGWNVIKVIWGSKWDELLAKDGGGA 235 (386)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCCCH
T ss_conf 52115098999999999847797799995698656752267632589999999877980898532214999976787546
Q ss_pred ----------------------------------------------------CCCCHHHHHHHHHHHHH-CCCCHHHHHC
Q ss_conf ----------------------------------------------------44406788888887511-0221022201
Q gi|254780655|r 229 ----------------------------------------------------NGHDHHAITSTLRKAQL-SDKPTMIACE 255 (673)
Q Consensus 229 ----------------------------------------------------dG~d~~~i~~a~~~ak~-~~kP~~I~~~ 255 (673)
T Consensus 236 L~~~m~e~~dg~yQ~~~~~~Ga~~Re~ffg~~pel~~lv~~lsD~dl~~L~rGGHD~~kl~aAy~~A~~~~grPTVIlA~ 315 (386)
T cd02017 236 LRQRMEETVDGDYQTLKAKDGAYVREHFFGKYPELKALVTDLSDEDLWALNRGGHDPRKVYAAYKKAVEHKGKPTVILAK 315 (386)
T ss_pred HHHHHHHCCCHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 99998866788889887247599999980898889999850788789987628999899999999998479998799977
Q ss_pred CCCCCCCCC-CCCCCCCCC-CCCCHHHHHHHHHHCCCCC
Q ss_conf 334555700-047711033-4372233212566348777
Q gi|254780655|r 256 TVIGFGSPN-RAGTNKVHG-SALGQEEIKATRKALNWDL 292 (673)
Q Consensus 256 T~kG~G~~~-~e~~~~~HG-~~l~~ee~~~~~k~lg~~~ 292 (673)
T Consensus 316 TvKG~Glg~age~~N~aHq~Kkl~~~~l~~fRdr~~iPi 354 (386)
T cd02017 316 TIKGYGLGAAGEGRNHAHQVKKMTEDELKALRDRFGIPV 354 (386)
T ss_pred EEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCC
T ss_conf 441278881336765544431599999999999749999