HHsearch alignment for GI: 254780655 and conserved domain: cd03372
>cd03372 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE subfamily, TPP-binding module; composed of proteins similar to Methanococcus jannaschii sulfopyruvate decarboxylase beta subunit (ComE). M. jannaschii sulfopyruvate decarboxylase (ComDE) is a dodecamer of six alpha (D) subunits and six (E) beta subunits, which catalyzes the decarboxylation of sulfopyruvic acid to sulfoacetaldehyde in the coenzyme M pathway. ComDE requires TPP and divalent metal cation cofactors.
Probab=98.78 E-value=3.6e-08 Score=78.21 Aligned_cols=115 Identities=24% Similarity=0.364 Sum_probs=82.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC-CCCCCC
Q ss_conf 6888631479999999999998534268876784599984362114344557887652202233069996276-322322
Q gi|254780655|r 127 ATTGPLGQGIANAVGMAIAERKLREEFGDVLIDHYTYVLVGDGCLMEGISQEAISFAGHLGLSKLIVLWDNNG-ISIDGP 205 (673)
Q Consensus 127 ~~tG~lG~gis~a~G~A~a~k~~~~~~~~~~~d~~v~~iiGDG~l~eG~~~EAl~~A~~~~l~nli~i~d~N~-~si~~~ 205 (673)
T Consensus 39 ~~lGtMG~~~p~aiGaa~a~------------p~kVi~i~GDGs~l--M~~geL~Ti~~~~~~n~~~ivlnN~~~g~~g~ 104 (179)
T cd03372 39 YMLGSMGLASSIGLGLALAQ------------PRKVIVIDGDGSLL--MNLGALATIAAEKPKNLIIVVLDNGAYGSTGN 104 (179)
T ss_pred EEECHHHHHHHHHHHHHHCC------------CCCEEEEECCHHHH--HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC
T ss_conf 73134450889999998657------------99689996780465--43669999997268978999983887554135
Q ss_pred --CCCCCCCCHHHHHHHCCCCCC-CCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCC
Q ss_conf --355678217998864144444-444440678888888751102210222013345
Q gi|254780655|r 206 --ISLADSTDQYARFRASGWNTL-SVNGHDHHAITSTLRKAQLSDKPTMIACETVIG 259 (673)
Q Consensus 206 --~~~~~~~~~~~~~~a~Gw~~~-~vdG~d~~~i~~a~~~ak~~~kP~~I~~~T~kG 259 (673)
T Consensus 105 q~t~~~~~~Df~~iA~a~G~~~~~~v~--~~e~l~~~l~~~--~~gP~~iev~i~~~ 157 (179)
T cd03372 105 QPTHAGKKTDLEAVAKACGLDNVATVA--SEEAFEKAVEQA--LDGPSFIHVKIKPG 157 (179)
T ss_pred CCCCCCCCCCHHHHHHHCCCCEEEEEC--CHHHHHHHHHHH--CCCCEEEEEEECCC
T ss_conf 036667898999999987997399989--999999999984--79999999998799