HHsearch alignment for GI: 254780655 and conserved domain: pfam00676
>pfam00676 E1_dh Dehydrogenase E1 component. This family uses thiamine pyrophosphate as a cofactor. This family includes pyruvate dehydrogenase, 2-oxoglutarate dehydrogenase and 2-oxoisovalerate dehydrogenase.
Probab=99.87 E-value=9.4e-20 Score=162.03 Aligned_cols=132 Identities=26% Similarity=0.345 Sum_probs=112.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
Q ss_conf 73068886314799999999999985342688767845999843621143445578876522022330699962763223
Q gi|254780655|r 124 GIEATTGPLGQGIANAVGMAIAERKLREEFGDVLIDHYTYVLVGDGCLMEGISQEAISFAGHLGLSKLIVLWDNNGISID 203 (673)
Q Consensus 124 ~v~~~tG~lG~gis~a~G~A~a~k~~~~~~~~~~~d~~v~~iiGDG~l~eG~~~EAl~~A~~~~l~nli~i~d~N~~si~ 203 (673)
T Consensus 98 ~~~~~~~~vg~~~~~avG~A~a~k~~~~-------~~v~v~~~GDGa~~~G~f~EalN~A~~~~l-Pvifv~eNN~yais 169 (303)
T pfam00676 98 RFYGGNGIVGAQVPLGAGIALAAKYRGK-------KEVAITLFGDGATNQGQFFEALNFAALWKL-PVIFVCENNQYAIS 169 (303)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCC-------CCEEEEEECCCCCCCCHHHHHHHHHHHCCC-CEEEEEEECCCCCC
T ss_conf 5147874130482265668999996389-------987999967997523299999998754389-87999952773366
Q ss_pred CCCCCCCC-CCHHHHHHHCCCCCCCCCCCCHHHHHHHHH----HHHHCCCCHHHHHCCCCCCCCC
Q ss_conf 22355678-217998864144444444440678888888----7511022102220133455570
Q gi|254780655|r 204 GPISLADS-TDQYARFRASGWNTLSVNGHDHHAITSTLR----KAQLSDKPTMIACETVIGFGSP 263 (673)
Q Consensus 204 ~~~~~~~~-~~~~~~~~a~Gw~~~~vdG~d~~~i~~a~~----~ak~~~kP~~I~~~T~kG~G~~ 263 (673)
T Consensus 170 t~~~~~~~~~~i~~ra~~~gi~~~~vDG~D~~~v~~~~~~a~~~aR~g~gP~lie~~tyR~~gHs 234 (303)
T pfam00676 170 TPAERSSASTYYADRARGYGIPGIRVDGMDPLAVYQAVKFAAERARTGNGPTLIELVTYRYGGHS 234 (303)
T ss_pred CCHHHHCCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC
T ss_conf 66645147554888865258028964886589999999999999864899889987511378667