RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddA 
           21,609 sequences; 6,263,737 total letters

Searching..................................................done

Query= gi|254780657|ref|YP_003065070.1| hypothetical protein
CLIBASIA_02720 [Candidatus Liberibacter asiaticus str. psy62]
         (61 letters)



>gnl|CDD|30561 COG0212, COG0212, 5-formyltetrahydrofolate cyclo-ligase [Coenzyme
          metabolism].
          Length = 191

 Score = 28.4 bits (63), Expect = 0.39
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 3  PREHKNLIRKKKMIARNLLSPAYRHMKSISLADLGAKKIPLEKKK 47
              K+ +RK  +  R  LSP  RH     +A L A  I ++K K
Sbjct: 1  KMATKSALRKLLLERRIALSPEERHEADQRIAKLLASLIEVKKAK 45


  Database: CddA
    Posted date:  Feb 4, 2011  9:38 PM
  Number of letters in database: 6,263,737
  Number of sequences in database:  21,609
  
Lambda     K      H
   0.320    0.132    0.370 

Gapped
Lambda     K      H
   0.267   0.0578    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21609
Number of Hits to DB: 700,733
Number of extensions: 25803
Number of successful extensions: 56
Number of sequences better than 10.0: 1
Number of HSP's gapped: 56
Number of HSP's successfully gapped: 1
Length of query: 61
Length of database: 6,263,737
Length adjustment: 33
Effective length of query: 28
Effective length of database: 5,550,640
Effective search space: 155417920
Effective search space used: 155417920
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.8 bits)