Query gi|254780658|ref|YP_003065071.1| 5-formyltetrahydrofolate cyclo-ligase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 113
No_of_seqs 112 out of 1985
Neff 6.0
Searched_HMMs 33803
Date Wed Jun 1 16:17:02 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780658.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >1sou_A 5,10-methenyltetrahydr 100.0 1.4E-37 4E-42 220.4 9.4 106 1-111 80-187 (194)
2 >1wkc_A HB8 TT1367 protein; st 100.0 8E-38 2.4E-42 221.6 7.9 107 1-112 72-179 (184)
3 >1ydm_A Hypothetical protein Y 100.0 3.6E-38 1.1E-42 223.4 5.5 102 1-107 82-187 (187)
4 >3hy3_A 5-formyltetrahydrofola 100.0 2E-37 5.9E-42 219.4 7.3 104 1-104 90-203 (203)
5 >2jcb_A 5-formyltetrahydrofola 100.0 2.2E-37 6.4E-42 219.3 5.3 103 1-108 93-199 (200)
6 >1sbq_A H91_ORF164, 5,10-methe 100.0 1.5E-31 4.5E-36 188.2 4.8 82 9-100 108-189 (189)
7 >1wu7_A Histidyl-tRNA syntheta 32.6 17 0.0005 18.0 1.0 33 46-80 170-202 (214)
8 >1z7m_A ATP phosphoribosyltran 29.3 19 0.00055 17.7 0.7 29 50-81 162-190 (204)
9 >2oas_A ATOA, 4-hydroxybutyrat 28.5 48 0.0014 15.5 2.9 66 28-98 108-173 (181)
10 >1x9p_A Penton protein; jellyr 27.2 18 0.00054 17.8 0.4 22 27-48 99-120 (295)
11 >1o4s_A Aspartate aminotransfe 25.3 28 0.00084 16.8 1.1 24 31-54 107-131 (148)
12 >1htt_A Histidyl-tRNA syntheta 24.7 29 0.00086 16.7 1.1 28 50-79 227-254 (269)
13 >1xi9_A Putative transaminase; 22.7 38 0.0011 16.1 1.3 22 31-52 111-135 (157)
14 >3eh7_A 4-hydroxybutyrate COA- 20.6 70 0.0021 14.7 3.0 66 28-98 117-182 (190)
15 >1j32_A Aspartate aminotransfe 20.4 40 0.0012 16.0 1.1 23 31-53 101-124 (143)
16 >1b5p_A Protein (aspartate ami 20.0 36 0.0011 16.2 0.8 23 31-53 105-128 (146)
No 1
>>1sou_A 5,10-methenyltetrahydrofolate synthetase; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; NMR {Aquifex aeolicus} (A:)
Probab=100.00 E-value=1.4e-37 Score=220.35 Aligned_cols=106 Identities=27% Similarity=0.509 Sum_probs=96.7
Q ss_pred CEEEEECCCCCCEECCCCCCCCCCCC--CCCCCCEEEEHHHHHCCCHHHHCCCCEEHHHHHHHHHHCCCCEEEEEEECHH
Q ss_conf 93465348885246488870889998--6114667740142211100111248603789998887449983799983223
Q gi|254780658|r 1 MIFRQYENPTDLVKSAVGTLSPPSYA--KEMSPDLILMPLIAFDLKGNRIGYGRGYYDRAIADIRLEGKNPYLLGIAFDM 78 (113)
Q Consensus 1 l~F~~~~~~~~l~~~~~gI~EP~~~~--~~~~~DlilVP~lafD~~G~RLG~GgGyYDR~l~~~~~~~~~~~~igla~~~ 78 (113)
|.|+.|++.++|.+|+|||+||..+. ....+|++|||+||||++|+|||||||||||+|+.+ ++..|||||++
T Consensus 80 l~f~~~~~~~~l~~~~~gi~eP~~~~~~~~~~idliivP~lafD~~G~RLG~G~GyYDr~l~~~-----~~~~vgi~~~~ 154 (194)
T 1sou_A 80 ISLYRVHSPACLGVGAFGIMEPVEGERVNPEDVDFIAVPGVAFDLEGYRLGFGKGYYDRLLKRV-----KGLKVGVAYSF 154 (194)
T ss_dssp EEEEEESSSCCCEECSSSCEECCSSEEECGGGCSEEEECCSCBCSSSCBCCSCCSSHHHHHHHC-----CSEEEEECCGG
T ss_pred EEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHC-----CCCEEEEEEHH
T ss_conf 4565327872012210004688755424555546412658998655873236576476675403-----89889998456
Q ss_pred HEECCCCCCCCCCCCCEEECCCCEEEECHHHCC
Q ss_conf 242478998447511589989855970033302
Q gi|254780658|r 79 QETSCIQAEATDIRLHAILTESRFSQFSTEHIE 111 (113)
Q Consensus 79 q~~~~ip~e~hD~~ld~iiTe~~~~~f~~~~~~ 111 (113)
|+++++|.|+||++||+|+||++++++++....
T Consensus 155 q~~~~lp~e~hD~~ld~iiT~~~~~~~~~~~~~ 187 (194)
T 1sou_A 155 QVFERLPRDAWDIPVDVLVTEKNVRRLRDGRSL 187 (194)
T ss_dssp GBCSCCCCCSCCCCCSEEECSSCEEESCCCCCC
T ss_pred HEECCCCCCCCCCCCCEEEECCEEEEECCCCCC
T ss_conf 350788998708378999967405995899853
No 2
>>1wkc_A HB8 TT1367 protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus HB8} (A:)
Probab=100.00 E-value=8e-38 Score=221.56 Aligned_cols=107 Identities=21% Similarity=0.316 Sum_probs=97.9
Q ss_pred CEEEEECCCCCCEECCCCCCCCCCCC-CCCCCCEEEEHHHHHCCCHHHHCCCCEEHHHHHHHHHHCCCCEEEEEEECHHH
Q ss_conf 93465348885246488870889998-61146677401422111001112486037899988874499837999832232
Q gi|254780658|r 1 MIFRQYENPTDLVKSAVGTLSPPSYA-KEMSPDLILMPLIAFDLKGNRIGYGRGYYDRAIADIRLEGKNPYLLGIAFDMQ 79 (113)
Q Consensus 1 l~F~~~~~~~~l~~~~~gI~EP~~~~-~~~~~DlilVP~lafD~~G~RLG~GgGyYDR~l~~~~~~~~~~~~igla~~~q 79 (113)
|.|..|.+.++|.+++|||+||..+. ....+|++|||+||||.+|+|||||||||||+|++. ++.+|||||++|
T Consensus 72 ~~~~~~~~~~~l~~~~~gi~eP~~~~~~~~~~DlvivP~lafd~~G~RlG~G~GyYDR~L~~~-----~~~~i~l~~~~q 146 (184)
T 1wkc_A 72 GKGLTVHPFGPLAPGPFGLLEPTTPPEDPRVLDLVVVPGLAFDREGYRLGHGQGFYDRFLKEV-----RAATVGVVPQAL 146 (184)
T ss_dssp TTEEEEEESCCBC-------CBCSCCBCGGGCSEEEECCSEEETTSCEECCSSCHHHHHHHHC-----CSEEEEECCGGG
T ss_pred CCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCCEEHHHHHHHC-----CCCEEEEEEHHH
T ss_conf 201121302100123220234333312355663776236898760761156862036677653-----886599977654
Q ss_pred EECCCCCCCCCCCCCEEECCCCEEEECHHHCCC
Q ss_conf 424789984475115899898559700333024
Q gi|254780658|r 80 ETSCIQAEATDIRLHAILTESRFSQFSTEHIEK 112 (113)
Q Consensus 80 ~~~~ip~e~hD~~ld~iiTe~~~~~f~~~~~~~ 112 (113)
+++++|.|+||++||+||||++++++++....+
T Consensus 147 ~~~~ip~e~hD~~ld~iiTe~~~~~~~~~~~~~ 179 (184)
T 1wkc_A 147 LFPALPRDPWDVPVDHLATEAGVEAVKRPAPGP 179 (184)
T ss_dssp EESCCCCCTTCCCCSEEEETTEEEECCCC----
T ss_pred CCCCCCCCCCCEECCEEEECCCCEEECCCCCCC
T ss_conf 727879985070379999887646946899998
No 3
>>1ydm_A Hypothetical protein YQGN; northeast structural genomics, SR44, X-RAY, PSI, protein structure initiative; 2.50A {Bacillus subtilis} (A:)
Probab=100.00 E-value=3.6e-38 Score=223.43 Aligned_cols=102 Identities=27% Similarity=0.499 Sum_probs=93.4
Q ss_pred CEEEEECCCCCCEECCCCCCCCCCCC----CCCCCCEEEEHHHHHCCCHHHHCCCCEEHHHHHHHHHHCCCCEEEEEEEC
Q ss_conf 93465348885246488870889998----61146677401422111001112486037899988874499837999832
Q gi|254780658|r 1 MIFRQYENPTDLVKSAVGTLSPPSYA----KEMSPDLILMPLIAFDLKGNRIGYGRGYYDRAIADIRLEGKNPYLLGIAF 76 (113)
Q Consensus 1 l~F~~~~~~~~l~~~~~gI~EP~~~~----~~~~~DlilVP~lafD~~G~RLG~GgGyYDR~l~~~~~~~~~~~~igla~ 76 (113)
|.|+.|++.++|..++|||+||..+. ....+|++|||+||||.+|+|||||||||||+|++ .++.+||+||
T Consensus 82 ~~~~~~~~~~~l~~~~~gi~eP~~~~~~~~~~~~~dliiVP~lafd~~G~RLG~G~GyYDr~l~~-----~~~~~vgv~~ 156 (187)
T 1ydm_A 82 XQFRTYQTDDQLETVYAGLLEPVIEKTKEVNPSQIDLXIVPGVCFDVNGFRVGFGGGYYDRYLSE-----YEGKTVSLLL 156 (187)
T ss_dssp CCEEECCCCTTHHHHHTTSCCCC--CCCCCCGGGCCEEECCCSEEETTSCEECCSCCSTTTGGGT-----CCSEEEEECC
T ss_pred EEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCEEECCCCCHHHHHHH-----CCCCEEEEEE
T ss_conf 47897478764133102333345442221234455446611300210171420479727899865-----6897899998
Q ss_pred HHHEECCCCCCCCCCCCCEEECCCCEEEECH
Q ss_conf 2324247899844751158998985597003
Q gi|254780658|r 77 DMQETSCIQAEATDIRLHAILTESRFSQFST 107 (113)
Q Consensus 77 ~~q~~~~ip~e~hD~~ld~iiTe~~~~~f~~ 107 (113)
++|+++++|.|+||++||.||||++++++++
T Consensus 157 ~~q~~~~ip~e~hD~~ld~iiTe~~i~~~~s 187 (187)
T 1ydm_A 157 ECQLFAHVPRLPHDIPVHKLITEDRIISCFS 187 (187)
T ss_dssp GGGEESCCCCCTTCCCCSEEECSSCEEECC-
T ss_pred EEEEECCCCCCCHHCCCCEEEECCCCEECCC
T ss_conf 8377367899605139899996893287479
No 4
>>3hy3_A 5-formyltetrahydrofolate cyclo-ligase; antifolate, cancer, acetylation, ATP-binding, cytoplasm, folate-binding, magnesium, nucleotide-binding; HET: 10F; 1.80A {Homo sapiens} PDB: 3hxt_A* 3hy4_A* 3hy6_A (A:)
Probab=100.00 E-value=2e-37 Score=219.44 Aligned_cols=104 Identities=29% Similarity=0.431 Sum_probs=91.8
Q ss_pred CEEEEECC---CCCCEECCCCCCCCCCCCC------CCCCCEEEEHHHHHCCCHHHHCCCCEEHHHHHHHHHHCC-CCEE
Q ss_conf 93465348---8852464888708899986------114667740142211100111248603789998887449-9837
Q gi|254780658|r 1 MIFRQYEN---PTDLVKSAVGTLSPPSYAK------EMSPDLILMPLIAFDLKGNRIGYGRGYYDRAIADIRLEG-KNPY 70 (113)
Q Consensus 1 l~F~~~~~---~~~l~~~~~gI~EP~~~~~------~~~~DlilVP~lafD~~G~RLG~GgGyYDR~l~~~~~~~-~~~~ 70 (113)
|.|+.|.. .++|.+|+|||+||..+.. ...+|++|||+||||++|+|||||||||||+|+.++..+ .++.
T Consensus 90 m~~~~~~~~~~~~~l~~~~~gI~eP~~~~~~~~~~~~~~~dliiVP~lafd~~G~RLG~G~GyYDr~l~~~~~~~~~~~~ 169 (203)
T 3hy3_A 90 MDMVRIESPEEISLLPKTSWNIPQPGEGDVREEALSTGGLDLIFMPGLGFDKHGNRLGRGKGYYDAYLKRCLQHQEVKPY 169 (203)
T ss_dssp EEEEEECCHHHHTTSCBCTTSCBCCCTTCCCCBGGGTTCCSEEEECCSEECTTCCEECSSSCHHHHHHHHHTTTCSSCCE
T ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEECCCCCCCHHHHHHHHCCCCCCC
T ss_conf 13677547652211257876888887556455656755578898333888068842307885433699985540577887
Q ss_pred EEEEECHHHEECCCCCCCCCCCCCEEECCCCEEE
Q ss_conf 9998322324247899844751158998985597
Q gi|254780658|r 71 LLGIAFDMQETSCIQAEATDIRLHAILTESRFSQ 104 (113)
Q Consensus 71 ~igla~~~q~~~~ip~e~hD~~ld~iiTe~~~~~ 104 (113)
+||+||++|+++.+|.|+||++||+|+||++++.
T Consensus 170 ~vgl~~~~q~~~~ip~e~hD~~ld~iiTe~gv~~ 203 (203)
T 3hy3_A 170 TLALAFKEQICLQVPVNENDMKVDEVLYEDSSTA 203 (203)
T ss_dssp EEEECCGGGBCSCCCCC--CCCCSEEECC-----
T ss_pred EEEEEEHHEEECCCCCCCCCCCCCEEEECCCCCC
T ss_conf 8999830104077899513228899981957774
No 5
>>2jcb_A 5-formyltetrahydrofolate cyclo-ligase family protein; 10- methenyltetrahydrofolate synthetase, MTHFS, folate metabolism, structural genomics; HET: ADP; 1.6A {Bacillus anthracis} (A:)
Probab=100.00 E-value=2.2e-37 Score=219.27 Aligned_cols=103 Identities=30% Similarity=0.417 Sum_probs=94.4
Q ss_pred CEEEEECCCCCCEECCCCCCCCCCCC----CCCCCCEEEEHHHHHCCCHHHHCCCCEEHHHHHHHHHHCCCCEEEEEEEC
Q ss_conf 93465348885246488870889998----61146677401422111001112486037899988874499837999832
Q gi|254780658|r 1 MIFRQYENPTDLVKSAVGTLSPPSYA----KEMSPDLILMPLIAFDLKGNRIGYGRGYYDRAIADIRLEGKNPYLLGIAF 76 (113)
Q Consensus 1 l~F~~~~~~~~l~~~~~gI~EP~~~~----~~~~~DlilVP~lafD~~G~RLG~GgGyYDR~l~~~~~~~~~~~~igla~ 76 (113)
|.|+.|+..++|.+++|||+||..+. ....+|++|||+||||++|+|||||||||||+|+++ ++.+||+||
T Consensus 93 l~~~~~~~~~~l~~~~~gi~eP~~~~~~~~~~~~~dliivP~lafd~~G~RLG~G~GyYDR~l~~~-----~~~~igi~~ 167 (200)
T 2jcb_A 93 MSFRQISNFDQLETVYMNLREPIPALTEEVNADEIDLQIVPGVAYTERGERIGYGGGYYDRYLVHY-----KGKTLSLAY 167 (200)
T ss_dssp EEEEEESSGGGEEEEETTEEEECGGGCEECCGGGCSEEECCCSEECTTSCEECSSSCHHHHHTTTC-----CSEEEEECC
T ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHCCCEEECCCCCHHHHHHHC-----CCCEEEEEE
T ss_conf 234463476534321343221103554301333464687115755132850006896677764315-----998999985
Q ss_pred HHHEECCCCCCCCCCCCCEEECCCCEEEECHH
Q ss_conf 23242478998447511589989855970033
Q gi|254780658|r 77 DMQETSCIQAEATDIRLHAILTESRFSQFSTE 108 (113)
Q Consensus 77 ~~q~~~~ip~e~hD~~ld~iiTe~~~~~f~~~ 108 (113)
++|+++++|.|+||++||+||||+++++++.-
T Consensus 168 ~~q~~~~iP~e~~D~~ld~iiT~~~i~~~~~~ 199 (200)
T 2jcb_A 168 SFQMVEHIPVEPFDKNVEKIITEKGTMVKNGL 199 (200)
T ss_dssp GGGBCSCCCCCTTCCCCSEEEETTEEEECC--
T ss_pred HHEECCCCCCCCCCCCCCEEEECCCEEECCCC
T ss_conf 22173788996331188999969927965885
No 6
>>1sbq_A H91_ORF164, 5,10-methenyltetrahydrofolate synthetase homolog; MTHFS, 5- formyltetrahydrofolate cyclo-ligase, structural genomics; 2.20A {Mycoplasma pneumoniae} (A:)
Probab=99.97 E-value=1.5e-31 Score=188.18 Aligned_cols=82 Identities=28% Similarity=0.610 Sum_probs=73.8
Q ss_pred CCCCEECCCCCCCCCCCCCCCCCCEEEEHHHHHCCCHHHHCCCCEEHHHHHHHHHHCCCCEEEEEEECHHHEECCCCCCC
Q ss_conf 88524648887088999861146677401422111001112486037899988874499837999832232424789984
Q gi|254780658|r 9 PTDLVKSAVGTLSPPSYAKEMSPDLILMPLIAFDLKGNRIGYGRGYYDRAIADIRLEGKNPYLLGIAFDMQETSCIQAEA 88 (113)
Q Consensus 9 ~~~l~~~~~gI~EP~~~~~~~~~DlilVP~lafD~~G~RLG~GgGyYDR~l~~~~~~~~~~~~igla~~~q~~~~ip~e~ 88 (113)
...+..++|||+||. .+|++|||+||||++|+|||||||||||+|+.+ ..++.+||++|++|++ ++|.|+
T Consensus 108 ~~~~~~~~~~i~EP~------~~dliiVP~lafd~~G~RlG~GgGyYDR~l~~~---~~~~~~igl~~~~q~~-~lp~e~ 177 (189)
T 1sbq_A 108 EIIFIDQETNTFEPN------QIDCFLIPLVGFNKDNYRLGFGKGYYDRYLMQL---TRQQPKIGIAYSFQKG-DFLADP 177 (189)
T ss_dssp CEEEECTTCCEECGG------GCCEEEEECSEECTTCCEECCSSCHHHHHGGGC---CSCCCEEEEECGGGBC-CCCCCT
T ss_pred CCCCCCCCCCCCCCC------CCCEEEEEEEEEEECCCCEECCCCHHHHHHHHC---CCCCCEEEEEEHHHCC-CCCCCC
T ss_conf 221111234457886------577899745006760762104777478999865---8899689998635244-889960
Q ss_pred CCCCCCEEECCC
Q ss_conf 475115899898
Q gi|254780658|r 89 TDIRLHAILTES 100 (113)
Q Consensus 89 hD~~ld~iiTe~ 100 (113)
||++||+||||+
T Consensus 178 hD~~lD~iiTe~ 189 (189)
T 1sbq_A 178 WDVQLDLIINDE 189 (189)
T ss_dssp TSCCCSEEEECC
T ss_pred CCCCCCEEECCC
T ss_conf 132479895888
No 7
>>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} (A:1-44,A:96-165,A:229-328)
Probab=32.59 E-value=17 Score=17.97 Aligned_cols=33 Identities=21% Similarity=0.223 Sum_probs=23.4
Q ss_pred HHHCCCCEEHHHHHHHHHHCCCCEEEEEEECHHHE
Q ss_conf 11124860378999888744998379998322324
Q gi|254780658|r 46 NRIGYGRGYYDRAIADIRLEGKNPYLLGIAFDMQE 80 (113)
Q Consensus 46 ~RLG~GgGyYDR~l~~~~~~~~~~~~igla~~~q~ 80 (113)
.+--=|||=||+.++.+. ++..+.+|.|+....
T Consensus 170 ~~~i~~GGRYD~Ll~~~~--g~~~PAvGFa~~ldr 202 (214)
T 1wu7_A 170 FRAILGGGRYDNLASLXS--GESVPAVGFGXGDAV 202 (214)
T ss_dssp CSCSSEEEECTTHHHHHH--SCCCCEEEEEEEHHH
T ss_pred CCCCCCCCCCCCCCCCCC--CCCCCCCEECCHHHH
T ss_conf 221004554442100025--864432101000157
No 8
>>1z7m_A ATP phosphoribosyltransferase regulatory subunit; ATP-PRT, histidine biosynthesis, hiszg, allosteric, evolution; 2.90A {Lactococcus lactis} (A:1-60,A:114-182,A:270-344)
Probab=29.25 E-value=19 Score=17.74 Aligned_cols=29 Identities=17% Similarity=0.511 Sum_probs=21.3
Q ss_pred CCCEEHHHHHHHHHHCCCCEEEEEEECHHHEE
Q ss_conf 48603789998887449983799983223242
Q gi|254780658|r 50 YGRGYYDRAIADIRLEGKNPYLLGIAFDMQET 81 (113)
Q Consensus 50 ~GgGyYDR~l~~~~~~~~~~~~igla~~~q~~ 81 (113)
-|||=||..++.+ +...+.||.++....+
T Consensus 162 ~gGGRYD~Li~~f---G~~~PAVGFaigierL 190 (204)
T 1z7m_A 162 LSGGRYDQLLSNF---QEEAFAIGFCCHMDTI 190 (204)
T ss_dssp EEEEECHHHHHTS---SSCCCCEEEEEEHHHH
T ss_pred EECCCHHHHHHHH---CCCCCEEEEEEEHHHH
T ss_conf 7683477999971---9998779999569999
No 9
>>2oas_A ATOA, 4-hydroxybutyrate coenzyme A transferase; alpha beta protein, structural genomics, PSI-2, protein structure initiative; HET: COA; 2.40A {Shewanella oneidensis mr-1} (A:1-181)
Probab=28.51 E-value=48 Score=15.53 Aligned_cols=66 Identities=11% Similarity=-0.081 Sum_probs=40.9
Q ss_pred CCCCCEEEEHHHHHCCCHHHHCCCCEEHHHHHHHHHHCCCCEEEEEEECHHHEECCCCCCCCCCCCCEEEC
Q ss_conf 11466774014221110011124860378999888744998379998322324247899844751158998
Q gi|254780658|r 28 EMSPDLILMPLIAFDLKGNRIGYGRGYYDRAIADIRLEGKNPYLLGIAFDMQETSCIQAEATDIRLHAILT 98 (113)
Q Consensus 28 ~~~~DlilVP~lafD~~G~RLG~GgGyYDR~l~~~~~~~~~~~~igla~~~q~~~~ip~e~hD~~ld~iiT 98 (113)
...+|+.++-+-.-|++|+--=-+..+|++.+.+. .. ..|.-+-+..-.......-|...+|+|+-
T Consensus 108 ~l~~Dvali~~s~~D~~G~~s~~~~~~~~~~~~~~---A~--~VI~eVn~~~p~~~g~~~i~~~~VD~iV~ 173 (181)
T 2oas_A 108 EQKIDTAIIQVSPPDKHGXCSLGISVEATLAACQV---AG--KIIAHINPQXPRTHGDGFIHIDRFAAVYE 173 (181)
T ss_dssp SSCCSEEEEEECCCCTTCEEECTTBCTTHHHHHHH---CS--EEEEEECTTSCCCEESCEEEGGGCSEEEE
T ss_pred CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHH---CC--EEEEEECCCCCCCCCCCCCCCCEEEEEEE
T ss_conf 99998699998568988713257522568999973---78--69998426668788886045540578885
No 10
>>1x9p_A Penton protein; jellyroll domain, anti-parallel beta sheet, insertion domain, virus like particle; HET: C15; 3.30A {Human adenovirus 2} PDB: 1x9t_A* 2bld_A 2c9f_A 2c9g_A 2c6s_A (A:88-382)
Probab=27.18 E-value=18 Score=17.79 Aligned_cols=22 Identities=32% Similarity=0.682 Sum_probs=17.3
Q ss_pred CCCCCCEEEEHHHHHCCCHHHH
Q ss_conf 6114667740142211100111
Q gi|254780658|r 27 KEMSPDLILMPLIAFDLKGNRI 48 (113)
Q Consensus 27 ~~~~~DlilVP~lafD~~G~RL 48 (113)
+.-.||++|.|+.|+|=.-.||
T Consensus 99 ~afHpDivLlPgC~VDFt~SRl 120 (295)
T 1x9p_A 99 EAFHPDIILLPGCGVDFTHSRL 120 (295)
T ss_dssp CBCSCCCEECTTCEEECTTCTH
T ss_pred CCCCCCEEECCCCCCCCCHHHH
T ss_conf 3447877862785203627776
No 11
>>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; HET: PLP; 1.90A {Thermotoga maritima} (A:1-52,A:294-389)
Probab=25.30 E-value=28 Score=16.76 Aligned_cols=24 Identities=25% Similarity=0.390 Sum_probs=18.2
Q ss_pred CCEEEEHHHHHCCCH-HHHCCCCEE
Q ss_conf 667740142211100-111248603
Q gi|254780658|r 31 PDLILMPLIAFDLKG-NRIGYGRGY 54 (113)
Q Consensus 31 ~DlilVP~lafD~~G-~RLG~GgGy 54 (113)
-.++++||.+|...| .||.|+.--
T Consensus 107 ~gV~v~PGs~Fg~~~~iRis~a~~~ 131 (148)
T 1o4s_A 107 KKVALVPGSAFLKPGFVRLSFATSI 131 (148)
T ss_dssp HCEECEEGGGGTCTTEEEEECCSCH
T ss_pred CCEEEEECCCCCCCCEEEEEECCCH
T ss_conf 9999996732589997999964989
No 12
>>1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} (A:1-42,A:98-324)
Probab=24.70 E-value=29 Score=16.70 Aligned_cols=28 Identities=21% Similarity=0.509 Sum_probs=20.1
Q ss_pred CCCEEHHHHHHHHHHCCCCEEEEEEECHHH
Q ss_conf 486037899988874499837999832232
Q gi|254780658|r 50 YGRGYYDRAIADIRLEGKNPYLLGIAFDMQ 79 (113)
Q Consensus 50 ~GgGyYDR~l~~~~~~~~~~~~igla~~~q 79 (113)
=|||=||+.++.+. ++....+|++..-.
T Consensus 227 a~GGRYD~L~~~f~--~~~~pAvGfsi~le 254 (269)
T 1htt_A 227 CAGGRYDGLVEQLG--GRATPAVGFAMGLE 254 (269)
T ss_dssp EEEEECTTHHHHTT--SCCCCEEEEEEEHH
T ss_pred CCCCCCCCHHHHCC--CCCCCCEEEEEHHH
T ss_conf 24777630556507--87666236640578
No 13
>>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg, hyperthermophIle; HET: PLP; 2.33A {Pyrococcus furiosus dsm 3638} (A:1-50,A:300-406)
Probab=22.66 E-value=38 Score=16.11 Aligned_cols=22 Identities=14% Similarity=0.191 Sum_probs=16.3
Q ss_pred CCEEEEHHHHHCCC--HH-HHCCCC
Q ss_conf 66774014221110--01-112486
Q gi|254780658|r 31 PDLILMPLIAFDLK--GN-RIGYGR 52 (113)
Q Consensus 31 ~DlilVP~lafD~~--G~-RLG~Gg 52 (113)
-.++++|+-+|... ++ ||+|+.
T Consensus 111 ~gV~v~PGs~F~~~g~~~iRis~~~ 135 (157)
T 1xi9_A 111 AHVLFVHGSGFGEYGAGHFRAVFLP 135 (157)
T ss_dssp HCEECEEGGGGCGGGTTBEEEECCS
T ss_pred CCEEEECCHHHCCCCCCEEEEEECC
T ss_conf 9999984734288998979999738
No 14
>>3eh7_A 4-hydroxybutyrate COA-transferase; citrate lyase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Porphyromonas gingivalis} (A:1-190)
Probab=20.63 E-value=70 Score=14.68 Aligned_cols=66 Identities=14% Similarity=0.017 Sum_probs=41.0
Q ss_pred CCCCCEEEEHHHHHCCCHHHHCCCCEEHHHHHHHHHHCCCCEEEEEEECHHHEECCCCCCCCCCCCCEEEC
Q ss_conf 11466774014221110011124860378999888744998379998322324247899844751158998
Q gi|254780658|r 28 EMSPDLILMPLIAFDLKGNRIGYGRGYYDRAIADIRLEGKNPYLLGIAFDMQETSCIQAEATDIRLHAILT 98 (113)
Q Consensus 28 ~~~~DlilVP~lafD~~G~RLG~GgGyYDR~l~~~~~~~~~~~~igla~~~q~~~~ip~e~hD~~ld~iiT 98 (113)
...||+.++-+-.-|++|+=.=-+..+|++.++.- .+ ..|.-+-+..-...-...-|..-+|+|+-
T Consensus 117 ~~~~DVaii~~s~~D~~Gn~~lg~~~~~~~~~~~~---A~--~VIvevn~~vp~~~~~~~Ip~~~VD~vVe 182 (190)
T 3eh7_A 117 ILHIDVAIVQLSXPDENGYCSFGVSCDYSKPAAES---AH--LVIGEINRQXPYVHGDNLIHISKLDYIVX 182 (190)
T ss_dssp SSCCSEEEEEECCCCTTSEEECTTBCTTHHHHHHH---CS--EEEEEEETTSCCCEESCEEEGGGCSEEEE
T ss_pred CCCCCEEEEEEECCCCCCCEEECCCCCHHHHHHHH---CC--EEEEEECCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 88886899996256899836535884057999973---88--49997242014678985022442168986
No 15
>>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} (A:1-40,A:286-388)
Probab=20.44 E-value=40 Score=15.95 Aligned_cols=23 Identities=22% Similarity=0.374 Sum_probs=17.5
Q ss_pred CCEEEEHHHHHCCCH-HHHCCCCE
Q ss_conf 667740142211100-11124860
Q gi|254780658|r 31 PDLILMPLIAFDLKG-NRIGYGRG 53 (113)
Q Consensus 31 ~DlilVP~lafD~~G-~RLG~GgG 53 (113)
-.++++|+.+|...+ .||+++.-
T Consensus 101 ~gV~v~PGs~F~~~~~iRlsfa~~ 124 (143)
T 1j32_A 101 HQVATVPGAAFGADDCIRLSYATD 124 (143)
T ss_dssp HCEECEEGGGGTCTTBEEEECCSC
T ss_pred CCEEEEECCCCCCCCEEEEEEECC
T ss_conf 999998264359999699998089
No 16
>>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} (A:1-42,A:282-385)
Probab=20.05 E-value=36 Score=16.21 Aligned_cols=23 Identities=22% Similarity=0.437 Sum_probs=17.7
Q ss_pred CCEEEEHHHHHCCCH-HHHCCCCE
Q ss_conf 667740142211100-11124860
Q gi|254780658|r 31 PDLILMPLIAFDLKG-NRIGYGRG 53 (113)
Q Consensus 31 ~DlilVP~lafD~~G-~RLG~GgG 53 (113)
-.++++|+..|..++ .||+++.-
T Consensus 105 ~gV~v~PGs~F~~~~~iRl~~~~~ 128 (146)
T 1b5p_A 105 AGVAVVPGTDFAAFGHVRLSYATS 128 (146)
T ss_dssp TTEECEESGGGTCTTEEEEECCSC
T ss_pred CCEEEEECCCCCCCCEEEEEECCC
T ss_conf 897999572258999799997599
Done!