RPSBLAST alignment of GI: 254780658 and protein with PDBid: 1ydm

>1ydm_A Hypothetical protein YQGN; northeast structural genomics, SR44, X-RAY, PSI, protein structure initiative; 2.50A {Bacillus subtilis} Length = 187

 Score = 64.1 bits (155), Expect = 7e-12
 Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 5/72 (6%)

Query: 31  PDLILMPLIAFDLKGNRIGYGRGYYDRAIADIRLEGKNPYLLGIAFDMQETSCIQAEATD 90
            DL+++P + FD+ G R+G+G GYYDR +++          + +  + Q  + +     D
Sbjct: 116 IDLMIVPGVCFDVNGFRVGFGGGYYDRYLSE-----YEGKTVSLLLECQLFAHVPRLPHD 170

Query: 91  IRLHAILTESRF 102
           I +H ++TE R 
Sbjct: 171 IPVHKLITEDRI 182