HHsearch results for GI: 254780659 and protein with PDBid: 3jyf_A
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=98.65 E-value=6.2e-07 Score=64.41 Aligned_cols=185 Identities=13% Similarity=0.068 Sum_probs=120.0
Q ss_pred CEEEEEEECCCH--------------HHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCH-------------HHHH
Q ss_conf 926999720276--------------8899999980898886099899991700478867899-------------9999
Q gi|254780659|r 1 MRLLFLGDIVGK--------------TGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITE-------------KIFC 53 (274)
Q Consensus 1 MkiLfiGDIvG~--------------~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~-------------~~~~ 53 (274)
++||..-|+=|+ .|.-.+...+.++|++.. +.+++++-..-.|..+.. -.++
T Consensus 9 l~il~tnD~Hg~l~~~~~~~~~~~~~gG~arlat~i~~~r~~~~-~~l~ldaGD~~~Gs~~~~~~~~~~~~~~~~~~~~~ 87 (339)
T 3jyf_A 9 LRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVK-NSVLVDNGDVIQGSPLGDYMAAKGLKEGDVHPVYK 87 (339)
T ss_dssp EEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCS-CEEEEECSCCSSSSHHHHHHHHHCCCTTCCCHHHH
T ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CEEEEEECCCCCCCCHHHHHCCCCCCCCCCCHHHH
T ss_conf 99999665656875756567777675629999999999997688-96999848778883008763253113455316999
Q ss_pred HHHHCCCCEEEECHHHHCCC--CHHHHHHHCCCEEEECCCCCCCC----CCCEEEEEC--------CCCCEEEEEEEEHH
Q ss_conf 99837998999342653022--20475421893897500798887----540799984--------89928999996000
Q gi|254780659|r 54 EMMETGIDVITTGNHVWDKR--EALVFSQRHCKFLRPANYPPNTP----GNGSGLYCA--------KNGSNVLVANIMGR 119 (274)
Q Consensus 54 ~l~~~GvDviT~GNH~wd~k--ei~~~i~~~~~ilRP~N~p~~~P----G~G~~i~~~--------~~g~ki~Vinl~Gr 119 (274)
-|-.+|.|+.|.|||=||.- .+..+++..+.-.=-+|+-.... -..|.+.+. .+|.||+|+-+...
T Consensus 88 ~~n~~g~Da~~~GNHEFD~G~~~l~~~~~~~~~p~l~aNv~~~~~~~~~~~py~i~~~~v~~~~g~~~g~kIgviG~~~~ 167 (339)
T 3jyf_A 88 AMNTLNYAVGNLGNHEFNYGLDFLHKALAGAKFPYVNANIIDAKTGKPMFTPYLIQDTRVVDSDGQIHTLRIGYIGFVPP 167 (339)
T ss_dssp HHTTSCCSEEECCGGGGTTCHHHHHHHHHTCSSCEECSSEEETTTSSBSSCCEEEEEEEEECTTSCEEEEEEEEEEECCT
T ss_pred HHHHCCCCEEECCHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCC
T ss_conf 99755988161124766527999999974067987766403366787277886012068875155133369988605776
Q ss_pred H---------CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH--------HHHHHHHCCCEEEEEECCCCC
Q ss_conf 0---------58833259899999998634136899889996257622899--------999976089577998069762
Q gi|254780659|r 120 V---------FMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSEK--------QCFAHFVDSRASLVVGTHTHI 182 (274)
Q Consensus 120 ~---------fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK--------~A~g~~lDGrVsaVvGTHTHV 182 (274)
- .=.-.+.+|..++.+.+++++ .+.+|+|++=.|.--...+ ..++--++| +.+|+|-|||.
T Consensus 168 ~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~-~~g~D~iI~l~H~G~~~d~~~~~~~~~~~~a~~~~g-iD~IlgGHsH~ 245 (339)
T 3jyf_A 168 QIMTWDKANLNGKVTVNDITETARKYIPEMR-AKGADVVVVVAHSGLSADPYQAMAENSVYYLSQVPG-VDAIMFGHAHA 245 (339)
T ss_dssp THHHHTHHHHTTTEEECCHHHHHHHHHHHHH-HTTCSEEEEEECCCCCCSCCCTTCSCCHHHHTTSTT-CCEEEECSSCS
T ss_pred CCCCCCCCCCCCCCEECCHHHHHHHHHHHHH-HCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC-CCEEEECCCCC
T ss_conf 6432545455687207889999999997665-528983220334485666332234326889846899-87899698876
Q ss_pred CCCHHH
Q ss_conf 465456
Q gi|254780659|r 183 PTADAQ 188 (274)
Q Consensus 183 ~TaD~r 188 (274)
.-....
T Consensus 246 ~~~~~~ 251 (339)
T 3jyf_A 246 VFPGKD 251 (339)
T ss_dssp EESSGG
T ss_pred CCCCCC
T ss_conf 465776