Query         gi|254780659|ref|YP_003065072.1| hypothetical protein CLIBASIA_02730 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 274
No_of_seqs    135 out of 850
Neff          4.4 
Searched_HMMs 23785
Date          Tue May 31 17:59:26 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780659.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1t71_A Phosphatase, conserved; 100.0       0       0  809.5  28.1  264    1-274     5-274 (281)
  2 1t70_A Phosphatase; crystal, X 100.0       0       0  797.3  27.2  251    1-262     1-253 (255)
  3 2z06_A Putative uncharacterize 100.0       0       0  796.7  27.6  250    1-262     1-250 (252)
  4 3ive_A Nucleotidase; structura  98.9 1.6E-07 6.6E-12   68.2  16.3  180    2-186     8-240 (509)
  5 2z1a_A 5'-nucleotidase; metal-  98.9 1.6E-07 6.8E-12   68.2  15.9  179    2-185    31-244 (552)
  6 3gve_A YFKN protein; alpha-bet  98.9 1.6E-07 6.8E-12   68.2  14.8  184    2-188    13-258 (341)
  7 1hp1_A 5'-nucleotidase; metall  98.8 2.7E-07 1.1E-11   66.8  15.6  182    1-185     9-233 (516)
  8 3c9f_A 5'-nucleotidase; 2',3'-  98.8 1.7E-07 7.2E-12   68.0  13.2  187    2-192    17-249 (557)
  9 3jyf_A 2',3'-cyclic nucleotide  98.7 6.2E-07 2.6E-11   64.4  12.4  185    1-188     9-251 (339)
 10 2wdc_A SOXB, sulfur oxidation   98.6 4.1E-06 1.7E-10   59.1  15.6  167   14-185   103-292 (562)
 11 1uf3_A Hypothetical protein TT  96.6   0.045 1.9E-06   32.9  11.7  183    1-201     6-205 (228)
 12 1s3l_A Hypothetical protein MJ  96.5   0.053 2.2E-06   32.4  12.8  132    1-197    26-160 (190)
 13 1ute_A Protein (II purple acid  95.7    0.13 5.3E-06   30.0  12.5  186    1-199     7-239 (313)
 14 2q8u_A Exonuclease, putative;   94.8    0.24   1E-05   28.1  11.6  175    1-184    19-233 (336)
 15 1ii7_A MRE11 nuclease; RAD50,   94.6    0.27 1.1E-05   27.9  11.3  207    1-212     1-243 (333)
 16 1xzw_A Purple acid phosphatase  94.5    0.28 1.2E-05   27.7  10.9  194    2-208   128-366 (426)
 17 1su1_A Hypothetical protein YF  94.3    0.13 5.3E-06   30.0   6.7   71    1-74     26-104 (208)
 18 2yvt_A Hypothetical protein AQ  93.3   0.064 2.7E-06   31.9   3.7   70    1-73      6-104 (260)
 19 2qjc_A Diadenosine tetraphosph  93.0    0.11 4.6E-06   30.4   4.5   66    1-70     19-84  (262)
 20 2fli_A Ribulose-phosphate 3-ep  92.3    0.11 4.7E-06   30.3   3.9   58  126-191    70-130 (220)
 21 2nxf_A Putative dimetal phosph  92.2    0.67 2.8E-05   25.3  11.6   73    1-74      6-103 (322)
 22 3d03_A Phosphohydrolase; glyce  90.6    0.96   4E-05   24.3  13.3  185    1-203     1-216 (274)
 23 2kkn_A Uncharacterized protein  90.2     0.8 3.4E-05   24.8   6.5  130    1-204    23-157 (178)
 24 2iw0_A Chitin deacetylase; hyd  90.2    0.26 1.1E-05   27.9   4.0  130   18-154    56-206 (254)
 25 2qfp_A Purple acid phosphatase  89.5     1.2 4.9E-05   23.7  12.0  194    2-208   121-359 (424)
 26 2dfj_A Diadenosinetetraphospha  89.0    0.65 2.8E-05   25.4   5.2   67    1-70      1-68  (280)
 27 3inp_A D-ribulose-phosphate 3-  88.7    0.59 2.5E-05   25.6   4.8   59  126-192    95-156 (246)
 28 3ib7_A ICC protein; metallopho  87.5     1.6 6.7E-05   22.9  11.1  176    1-201    26-238 (330)
 29 1rd5_A Tryptophan synthase alp  85.7     1.9   8E-05   22.3   6.1   48   18-66      5-52  (262)
 30 1g5b_A Serine/threonine protei  85.6     1.3 5.3E-05   23.5   5.1   64    2-69     14-77  (221)
 31 1nnw_A Hypothetical protein; s  85.0     2.1 8.9E-05   22.0   6.3   64    1-69      2-74  (252)
 32 3ctl_A D-allulose-6-phosphate   84.7       1 4.2E-05   24.1   4.3   59  126-192    66-128 (231)
 33 1h1y_A D-ribulose-5-phosphate   84.2     0.2 8.6E-06   28.6   0.5   53  126-185    73-129 (228)
 34 1rpx_A Protein (ribulose-phosp  83.4    0.14 5.7E-06   29.8  -0.6   58  126-191    77-139 (230)
 35 1tqj_A Ribulose-phosphate 3-ep  82.2    0.61 2.6E-05   25.5   2.3   58  126-191    71-133 (230)
 36 1tqx_A D-ribulose-5-phosphate   81.5       2 8.3E-05   22.2   4.7   57  126-189    73-134 (227)
 37 1z2w_A Vacuolar protein sortin  77.0    0.57 2.4E-05   25.8   0.8  140    1-209    11-152 (192)
 38 2dc1_A L-aspartate dehydrogena  75.1     4.5 0.00019   19.9   6.8   87    1-97      1-117 (236)
 39 2z2v_A Hypothetical protein PH  69.1     6.1 0.00026   19.1   6.4   58    1-66     17-108 (365)
 40 2ip4_A PURD, phosphoribosylami  65.3     7.3 0.00031   18.6   6.2   79   20-103    51-155 (417)
 41 2w3z_A Putative deacetylase; P  65.1     7.2  0.0003   18.6   4.2   50   19-75    123-173 (311)
 42 3bio_A Oxidoreductase, GFO/IDH  62.6       8 0.00034   18.3   4.1   19    1-21     10-28  (304)
 43 3khj_A Inosine-5-monophosphate  62.0     8.4 0.00035   18.2   6.0   42   17-66    132-173 (361)
 44 2a22_A Vacuolar protein sortin  61.6     3.9 0.00016   20.3   2.3  147    3-208    28-175 (215)
 45 3cu2_A Ribulose-5-phosphate 3-  61.4     8.6 0.00036   18.1   5.3   60  125-192    77-148 (237)
 46 1j5p_A Aspartate dehydrogenase  59.7     3.8 0.00016   20.4   2.0   89    1-96     13-126 (253)
 47 2c1i_A Peptidoglycan glcnac de  59.4     9.3 0.00039   17.9   5.1   50   19-75    252-301 (431)
 48 1ujp_A Tryptophan synthase alp  56.0      11 0.00044   17.5   4.0  152   18-180    79-232 (271)
 49 1qv9_A F420-dependent methylen  55.0      11 0.00046   17.4   6.0  111   15-152    49-184 (283)
 50 3max_A HD2, histone deacetylas  54.8      11 0.00046   17.4   5.7   61  127-203   148-211 (367)
 51 2w6r_A Imidazole glycerol phos  54.8     5.5 0.00023   19.4   2.1   68    4-79     47-116 (266)
 52 1fs0_G ATP synthase gamma subu  54.5     3.6 0.00015   20.6   1.2   10  130-139    78-87  (230)
 53 3f4w_A Putative hexulose 6 pho  52.9      12  0.0005   17.2   5.5   10   59-68     25-34  (211)
 54 1qap_A Quinolinic acid phospho  52.5      12 0.00049   17.3   3.5   12  173-184   146-157 (296)
 55 1yad_A Regulatory protein TENI  52.5     9.8 0.00041   17.7   3.1   31   51-81     34-64  (221)
 56 2qr6_A IMP dehydrogenase/GMP r  51.7      12 0.00052   17.1   4.8   18   48-65    221-238 (393)
 57 1c3p_A Protein (HDLP (histone   51.0      13 0.00053   17.0   6.0   70  146-224   160-238 (375)
 58 1z7e_A Protein aRNA; rossmann   50.1      13 0.00055   16.9   4.7   84    1-92      1-85  (660)
 59 3oee_G ATP synthase subunit ga  50.0     3.5 0.00015   20.6   0.5   13  127-139    89-101 (278)
 60 2c71_A Glycoside hydrolase, fa  49.5      11 0.00047   17.4   3.0   54   16-76     18-72  (216)
 61 2zru_A Isopentenyl-diphosphate  49.2      13 0.00057   16.8   5.8   22   48-69    200-221 (368)
 62 3gr6_A Enoyl-[acyl-carrier-pro  48.5     7.7 0.00032   18.4   2.1   41   41-81     18-58  (260)
 63 1geq_A Tryptophan synthase alp  48.2      14 0.00059   16.7   7.4  151   18-179    68-222 (248)
 64 2j13_A Polysaccharide deacetyl  48.0     8.8 0.00037   18.0   2.3   51   19-76     71-121 (247)
 65 3paj_A Nicotinate-nucleotide p  47.7      14  0.0006   16.7   3.6   16   12-27     32-47  (320)
 66 2cc0_A Acetyl-xylan esterase;   47.6      13 0.00056   16.9   3.2   52   18-77     19-71  (195)
 67 2ck3_G ATP synthase gamma chai  46.5       4 0.00017   20.3   0.3   18  198-215    73-90  (272)
 68 2xok_G ATP synthase subunit ga  46.1     4.3 0.00018   20.0   0.5   16  194-209   105-123 (311)
 69 2r8r_A Sensor protein; KDPD, P  45.6      11 0.00047   17.3   2.6   27   54-80     29-55  (228)
 70 2bln_A Protein YFBG; transfera  45.2      16 0.00065   16.4   4.5   85    1-93      1-86  (305)
 71 1xi3_A Thiamine phosphate pyro  45.1      16 0.00066   16.4   5.5   52   24-81     10-61  (215)
 72 1ulu_A Enoyl-acyl carrier prot  45.0      12 0.00051   17.2   2.6   52   41-92     16-68  (261)
 73 1qpo_A Quinolinate acid phosph  42.4      10 0.00043   17.6   1.9   18  168-185   127-144 (284)
 74 2qe7_G ATP synthase subunit ga  42.0     4.1 0.00017   20.2  -0.2   15  196-210    81-95  (286)
 75 1ny1_A Probable polysaccharide  41.9      15 0.00062   16.6   2.7   52   19-77     59-110 (240)
 76 3kts_A Glycerol uptake operon   41.6      14 0.00057   16.8   2.5   31   41-71    154-185 (192)
 77 1j6u_A UDP-N-acetylmuramate-al  40.2      19 0.00078   15.9   6.0   21    1-23     13-33  (469)
 78 1x1o_A Nicotinate-nucleotide p  40.1      16 0.00069   16.3   2.7   14  214-227   182-195 (286)
 79 3ceu_A Thiamine phosphate pyro  39.4     4.6 0.00019   19.9  -0.2   33   49-81     16-48  (210)
 80 1ccw_A Protein (glutamate muta  39.2      19  0.0008   15.8   4.2   35   33-68      6-40  (137)
 81 2h7i_A Enoyl-[acyl-carrier-pro  39.0      15 0.00064   16.5   2.4   36   41-79     15-50  (269)
 82 2tps_A Protein (thiamin phosph  39.0      14 0.00057   16.8   2.1   43   25-71     14-56  (227)
 83 1g57_A DHBP synthase, 3,4-dihy  38.7      20 0.00082   15.8   4.2   55  119-176     3-70  (217)
 84 2cou_A ECT2 protein; BRCT doma  38.4     5.4 0.00023   19.4  -0.0   87    2-99     17-109 (109)
 85 1o13_A Probable NIFB protein;   38.4      20 0.00083   15.8   3.8   12  214-225   108-119 (136)
 86 1j9j_A Stationary phase surviV  37.5      20 0.00085   15.7   3.1   47    1-50      1-48  (247)
 87 1vkz_A Phosphoribosylamine--gl  37.2      21 0.00087   15.6   5.9   77   22-103    62-160 (412)
 88 3grk_A Enoyl-(acyl-carrier-pro  36.7      16 0.00067   16.4   2.2   28   41-68     39-66  (293)
 89 3nrc_A Enoyl-[acyl-carrier-pro  36.0      13 0.00055   16.9   1.6   26   41-66     34-59  (280)
 90 3l0g_A Nicotinate-nucleotide p  35.9      13 0.00053   17.0   1.6   54  168-227   140-207 (300)
 91 1qop_A Tryptophan synthase alp  35.4      22 0.00092   15.5   4.6   53   18-73      4-62  (268)
 92 3ew8_A HD8, histone deacetylas  35.0      22 0.00094   15.4   6.9   50  146-205   170-222 (388)
 93 2yx6_A Hypothetical protein PH  34.9      22 0.00094   15.4   3.9   18   47-64     72-89  (121)
 94 2fb6_A Conserved hypothetical   34.6      14 0.00059   16.7   1.7   55   19-86     61-115 (117)
 95 3men_A Acetylpolyamine aminohy  34.6      23 0.00095   15.4   5.2   61  127-201   191-254 (362)
 96 1f76_A Dihydroorotate dehydrog  33.9      23 0.00097   15.3   5.3   28   41-68     60-87  (336)
 97 1zgg_A Putative low molecular   33.7      23 0.00098   15.3   6.2   78    1-86      1-81  (150)
 98 1wa3_A 2-keto-3-deoxy-6-phosph  33.7      22 0.00094   15.4   2.6   61   20-89     50-110 (205)
 99 2qk4_A Trifunctional purine bi  33.4      23 0.00098   15.3   2.6   75   20-102    78-182 (452)
100 3k31_A Enoyl-(acyl-carrier-pro  33.1      16 0.00065   16.4   1.7   52   41-92     38-90  (296)
101 3jr2_A Hexulose-6-phosphate sy  33.1     8.7 0.00037   18.1   0.4   27  127-160    70-96  (218)
102 2ph5_A Homospermidine synthase  32.8      24   0.001   15.2   5.8   53  174-226   241-307 (480)
103 3oy2_A Glycosyltransferase B73  32.1      22  0.0009   15.5   2.3   37    1-37      1-39  (413)
104 2c6q_A GMP reductase 2; TIM ba  31.8      25  0.0011   15.1   5.9   43   17-66    147-189 (351)
105 2p91_A Enoyl-[acyl-carrier-pro  31.7      25  0.0011   15.1   2.6   34   33-68     23-56  (285)
106 3exr_A RMPD (hexulose-6-phosph  31.6      20 0.00084   15.7   2.0   17   51-68     23-39  (221)
107 2pqp_A HD7A, histone deacetyla  31.4      25  0.0011   15.0   4.9   64  127-202   201-267 (421)
108 3l9w_A Glutathione-regulated p  31.1      26  0.0011   15.0   6.3   17   48-64    104-120 (413)
109 3gnn_A Nicotinate-nucleotide p  30.4      22 0.00092   15.5   2.1   14  214-227   196-209 (298)
110 2yrx_A Phosphoribosylglycinami  30.4      26  0.0011   14.9   4.1   75   20-103    73-177 (451)
111 2wfb_A Putative uncharacterize  29.9      27  0.0011   14.9   3.2   16  210-225    96-111 (120)
112 3do5_A HOM, homoserine dehydro  29.7      27  0.0011   14.9   5.9  107   47-163    96-218 (327)
113 2zxr_A Single-stranded DNA spe  29.4      27  0.0012   14.8   3.9   51    2-56     74-126 (666)
114 2pd4_A Enoyl-[acyl-carrier-pro  29.0      23 0.00098   15.3   2.0   27   41-67     14-40  (275)
115 2bib_A CBPE, teichoic acid pho  28.6      28  0.0012   14.7   5.7   20  156-175   205-224 (547)
116 3l49_A ABC sugar (ribose) tran  28.3      29  0.0012   14.7   5.5   54   10-66     15-68  (291)
117 3ojf_A Enoyl-[acyl-carrier-pro  28.3      21 0.00087   15.6   1.6   27   41-67     14-40  (257)
118 2o2s_A Enoyl-acyl carrier redu  28.3      25  0.0011   15.1   2.1   28   41-68     17-44  (315)
119 1z3e_A Regulatory protein SPX;  28.0      24   0.001   15.2   1.9   77    9-90      5-96  (132)
120 2gek_A Phosphatidylinositol ma  27.9      29  0.0012   14.7   6.0   35    1-36     21-58  (406)
121 1viz_A PCRB protein homolog; s  27.9      29  0.0012   14.7   3.0   22   45-66     19-40  (240)
122 1zz1_A Histone deacetylase-lik  27.8      29  0.0012   14.7   5.2   11  168-178   300-310 (369)
123 3nav_A Tryptophan synthase alp  27.6      30  0.0012   14.6   6.3   46   18-66      7-54  (271)
124 2jbm_A Nicotinate-nucleotide p  27.5      30  0.0012   14.6   4.8   40  170-215   131-176 (299)
125 3fz4_A Putative arsenate reduc  25.9      25  0.0011   15.0   1.7   76    9-89      7-99  (120)
126 1lss_A TRK system potassium up  24.9      33  0.0014   14.3   4.1   47    1-63      5-52  (140)
127 1jvn_A Glutamine, bifunctional  24.8      33  0.0014   14.3   4.3   23  148-170   190-214 (555)
128 1nmo_A Hypothetical protein YB  24.4      34  0.0014   14.3   3.8   22   49-71     80-101 (247)
129 1vcf_A Isopentenyl-diphosphate  24.4      34  0.0014   14.3   2.8   13   52-64     81-93  (332)
130 3iix_A Biotin synthetase, puta  24.3      34  0.0014   14.2   5.3   62    2-71    103-164 (348)
131 1d7o_A Enoyl-[acyl-carrier pro  24.3      33  0.0014   14.3   2.1   28   41-68     16-43  (297)
132 1qsg_A Enoyl-[acyl-carrier-pro  24.1      33  0.0014   14.3   2.0   28   41-68     17-44  (265)
133 3mjf_A Phosphoribosylamine--gl  23.9      30  0.0013   14.6   1.8   78   20-102    57-160 (431)
134 2v82_A 2-dehydro-3-deoxy-6-pho  23.6      32  0.0013   14.4   1.9   62   19-89     46-107 (212)
135 1ypf_A GMP reductase; GUAC, pu  22.8      36  0.0015   14.1   5.5   19   48-66    159-177 (336)
136 2b4q_A Rhamnolipids biosynthes  22.7      36  0.0015   14.0   2.2   47   33-83     31-77  (276)
137 3c2e_A Nicotinate-nucleotide p  22.7      22 0.00093   15.4   0.9   12  174-185   137-148 (294)
138 1vbj_A Prostaglandin F synthas  22.4      37  0.0015   14.0   2.6  145   14-180    93-238 (281)
139 3ck2_A Conserved uncharacteriz  22.3      37  0.0016   14.0   3.4   58    1-71      7-64  (176)
140 2ae2_A Protein (tropinone redu  22.3      22 0.00094   15.4   0.9   94   43-138    17-116 (260)
141 3lp8_A Phosphoribosylamine-gly  21.9      38  0.0016   13.9   2.3   78   21-103    74-177 (442)
142 3lwt_X Phosphoinositide phosph  21.6      38  0.0016   13.9   4.2   45   11-56    279-323 (505)
143 3ek2_A Enoyl-(acyl-carrier-pro  21.5      38  0.0016   13.9   2.6   27   41-67     22-48  (271)
144 3gdg_A Probable NADP-dependent  21.5      34  0.0014   14.2   1.7   32   33-66     22-53  (267)
145 2nq5_A 5-methyltetrahydroptero  21.4      39  0.0016   13.9   1.9   25   46-70     43-67  (755)
146 2pkf_A Adenosine kinase; trans  21.3      18 0.00076   16.0   0.3  145    1-157    11-160 (334)
147 1xx1_A Smase I, sphingomyelina  21.2      39  0.0016   13.9   5.4   25   34-65      9-33  (285)
148 2yw2_A Phosphoribosylamine--gl  21.1      39  0.0016   13.8   4.2   39   20-63     52-90  (424)
149 2czd_A Orotidine 5'-phosphate   21.0      39  0.0016   13.8   4.8   28   49-78     68-95  (208)
150 3co8_A Alanine racemase; prote  20.3      41  0.0017   13.7   3.4   53   15-68     16-68  (380)
151 1ka9_F Imidazole glycerol phos  20.1      41  0.0017   13.7   7.1   68    4-79     48-117 (252)
152 1p3d_A UDP-N-acetylmuramate--a  20.1      41  0.0017   13.7   6.4   96  126-222   306-424 (475)
153 1xdw_A NAD+-dependent (R)-2-hy  20.0      41  0.0017   13.7   2.6   31    1-37      1-31  (331)

No 1  
>1t71_A Phosphatase, conserved; crystal, X-RAY crystallography, structural genomics, berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=100.00  E-value=0  Score=809.52  Aligned_cols=264  Identities=34%  Similarity=0.598  Sum_probs=253.9

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH
Q ss_conf             92699972027688999999808988860998999917004788678999999998379989993426530222047542
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQ   80 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~   80 (274)
                      |||||||||||+|||++|+++||+||++|++|||||||||||+|+|||+++|++|+++||||||+|||+|||||++++|+
T Consensus         5 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~iDfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~   84 (281)
T 1t71_A            5 IKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGVNYITMGNHTWFQKLDLAVVI   84 (281)
T ss_dssp             CEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHTCCEEECCTTTTCCGGGHHHHT
T ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHH
T ss_conf             36999980688889999999809999982899999898536789698999999999719989924721025635799885


Q ss_pred             HCCCEEEECCCCC----CCCCCCEEEEECCCCCEEEEEEEEHHHCCCC-CCCCHHHHHHHHHHHCCCCCCCCEEEEECCC
Q ss_conf             1893897500798----8875407999848992899999600005883-3259899999998634136899889996257
Q gi|254780659|r   81 RHCKFLRPANYPP----NTPGNGSGLYCAKNGSNVLVANIMGRVFMNP-LLDDPFRTADKILATCPLKEQADVIVFDFHA  155 (274)
Q Consensus        81 ~~~~ilRP~N~p~----~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~-~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHa  155 (274)
                      +++|||||+|||+    ++||+||.+++.. +.+++|+|||||+||.| .++|||+.++.++.+    .++++|||||||
T Consensus        85 ~~~~ilRP~N~p~~~p~~~pG~G~~i~~~~-~~~i~Vinl~Gr~fm~~~~~~~pf~~~~~~~~~----~~~~~iiVDfHA  159 (281)
T 1t71_A           85 NKKDLVRPLNLDTSFAFHNLGQGSLVFEFN-KAKIRITNLLGTSVPLPFKTTNPFKVLKELILK----RDCDLHIVDFHA  159 (281)
T ss_dssp             TCTTEECBSCBCTTSTTTTSSBSEEEEECS-SCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTT----CCCSEEEEEEEC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCEEEEECC-CCCEEEEEHHCCCCCCCCCCCCHHHHHHHHHHC----CCCCEEEEECCC
T ss_conf             266431045455446788888757999516-742542101174356875456356777788753----479879997355


Q ss_pred             CCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCC-HHHCCCCCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             62289999997608957799806976246545640367289840560137-12103547467898885168865411157
Q gi|254780659|r  156 ETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCGD-YNSSIGLDKEEPINRFITQIPRNRFVIAN  234 (274)
Q Consensus       156 EaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG~-~~SVIG~~~~~~i~rf~t~~p~~r~~~a~  234 (274)
                      ||||||+|||||||||||||+||||||||||+||||+|||||||+||||| |||||||+++++|+||++++|. ||++|+
T Consensus       160 EATSEK~Amg~~lDGrVsaVvGTHTHV~TaD~rILp~GTAyiTDvGMtG~~~dSVIG~~~e~~i~rf~t~~p~-rf~~a~  238 (281)
T 1t71_A          160 ETTSEKNAFCMAFDGYVTTIFGTHTHVPSADLRITPKGSAYITDVGMCGPGFGSVIGANPEQSIRLFCAGSRE-HFEVSK  238 (281)
T ss_dssp             SCHHHHHHHHHHHTTTSSEEEEESSSSCCTTCEECTTSCEEESCCCEEBCCTTSBTTBCHHHHHHHHTTCCCC-CCCBCC
T ss_pred             CHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCC-CCCCCC
T ss_conf             1178999999873698789985675622676647589819981486655886753254717899999718998-866689


Q ss_pred             CCEEEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCC
Q ss_conf             8719999999984799867467899876831657875349
Q gi|254780659|r  235 GPATLCGICAEISDVTGLAEKIAPIRIGPRLSETRPDFWT  274 (274)
Q Consensus       235 g~~~l~gv~ieid~~tG~a~~I~ri~igg~L~e~~p~~~~  274 (274)
                      ++++|||++||+|++||||.+|+||||    .|..|.+|+
T Consensus       239 g~~~l~gv~i~id~~tgka~~Ieri~i----~ed~p~~~~  274 (281)
T 1t71_A          239 CGAQLNGVFFEVDVNTKKVIKTEAIRI----VEDDPRYLK  274 (281)
T ss_dssp             SCEEEEEEEEECCTTTCCCCEEEEEEE----EECCGGGTT
T ss_pred             CCCEEEEEEEEEECCCCCEEEEEEEEE----CCCCHHHHH
T ss_conf             986899999998889897678999996----167704888


No 2  
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural genomics, berkeley structural genomics center, BSGC, PSI; 2.30A {Deinococcus radiodurans R1} SCOP: d.159.1.9
Probab=100.00  E-value=0  Score=797.26  Aligned_cols=251  Identities=41%  Similarity=0.741  Sum_probs=242.0

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH
Q ss_conf             92699972027688999999808988860998999917004788678999999998379989993426530222047542
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQ   80 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~   80 (274)
                      |||||||||||+|||++|+++||+||++|  |||||||||||+|+|||+++|++|+++||||||+|||+|||||+++||+
T Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~lk~~~--DfVIaNgENaa~G~Git~~~~~~L~~~GvDvIT~GNH~wd~kei~~~i~   78 (255)
T 1t70_A            1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF--DFVIVNMENSAGGFGMHRDAARGALEAGAGCLTLGNHAWHHKDIYPMLS   78 (255)
T ss_dssp             CEEEEECCBBHHHHHHHHHHHHHHHGGGC--SEEEEECTBTTTTSSCCHHHHHHHHHHTCSEEECCTTTTSSTTHHHHHH
T ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHC--CEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHC
T ss_conf             93999982689889999998718778509--8999998547898689999999999719979944741033860034441


Q ss_pred             HC-CCEEEECCCCC-CCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCH
Q ss_conf             18-93897500798-88754079998489928999996000058833259899999998634136899889996257622
Q gi|254780659|r   81 RH-CKFLRPANYPP-NTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETT  158 (274)
Q Consensus        81 ~~-~~ilRP~N~p~-~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaT  158 (274)
                      ++ ++||||+|||+ ++||+||.+++. +|+|++|+|||||+||.+ +||||+++|++|++    .+.++||||||||||
T Consensus        79 ~~~~~ilrp~N~p~~~~pG~G~~~~~~-~g~ki~Vinl~Gr~fM~~-~d~PF~~~d~~l~~----~~~~~i~VDfHaEaT  152 (255)
T 1t70_A           79 EDTYPIVRPLNYADPGTPGVGWRTFDV-NGEKLTVVNLLGRVFMEA-VDNPFRTMDALLER----DDLGTVFVDFHAEAT  152 (255)
T ss_dssp             TTCSCEECCSCCCCTTCSSCSEEEEEC-SSSEEEEEEEECCTTSCC-CSCHHHHHHHHTTC----SSCCEEEEEEECSCH
T ss_pred             CCCCCCCHHHCCCCCCCCCCEEEEEEC-CCCEEEEEEECCCCCCCC-CCCHHHHHHHHHHH----CCCCEEEEECCCHHH
T ss_conf             244000245507788899863999962-664399999325203786-77879999998864----468849998345037


Q ss_pred             HHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEE
Q ss_conf             89999997608957799806976246545640367289840560137121035474678988851688654111578719
Q gi|254780659|r  159 SEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCGDYNSSIGLDKEEPINRFITQIPRNRFVIANGPAT  238 (274)
Q Consensus       159 SEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG~~~SVIG~~~~~~i~rf~t~~p~~r~~~a~g~~~  238 (274)
                      |||+|||||||||||||+||||||||||+||||+|||||||+||||||||||||+++++|+||++++|. ||++|+++++
T Consensus       153 SEK~A~g~~ldGrvsavvGTHTHV~TaD~rILp~GTayiTDvGMtG~~~SVIG~~~~~~i~rf~t~~p~-rf~~a~g~~~  231 (255)
T 1t70_A          153 SEKEAMGWHLAGRVAAVIGTHTHVPTADTRILKGGTAYQTDAGFTGPHDSIIGSAIEGPLQRFLTERPH-RYGVAEGRAE  231 (255)
T ss_dssp             HHHHHHHHHHTTSSSEEEEESSCSCBSCCEEETTTEEEESCCCCBEESSSBTTBCSHHHHHHHHHCSCC-CCCBCCSCEE
T ss_pred             HHHHHHHHHHCCCEEEEEECCCCCCCCCCEECCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCC-CCCCCCCCCE
T ss_conf             899998987179589998567551255546848982999378665585222255716899999708998-8746799869


Q ss_pred             EEEEEEEEECCCCCEEEEEEEEEC
Q ss_conf             999999984799867467899876
Q gi|254780659|r  239 LCGICAEISDVTGLAEKIAPIRIG  262 (274)
Q Consensus       239 l~gv~ieid~~tG~a~~I~ri~ig  262 (274)
                      ||||+||+|  ||||++|+||||.
T Consensus       232 l~gv~ie~d--tg~a~~I~ri~i~  253 (255)
T 1t70_A          232 LNGVALHFE--GGKATAAERYRFI  253 (255)
T ss_dssp             EEEEEEEEE--TTEEEEEEEEEEE
T ss_pred             EEEEEEEEC--CCCEEEEEEEEEC
T ss_conf             999999967--9978989999945


No 3  
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus HB8} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=100.00  E-value=0  Score=796.68  Aligned_cols=250  Identities=43%  Similarity=0.730  Sum_probs=242.1

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH
Q ss_conf             92699972027688999999808988860998999917004788678999999998379989993426530222047542
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQ   80 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~   80 (274)
                      |||||||||||+|||++++++||+||++|  |||||||||||+|+|||+++|++|+++||||||+|||+|||||+++||+
T Consensus         1 M~iLfiGDIvG~~Gr~~v~~~Lp~l~~~~--DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~   78 (252)
T 2z06_A            1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY--DLVIANGENAARGKGLDRRSYRLLREAGVDLVSLGNHAWDHKEVYALLE   78 (252)
T ss_dssp             CEEEEECCBCHHHHHHHHHHHHHHHGGGC--SEEEEECTTTTTTSSCCHHHHHHHHHHTCCEEECCTTTTSCTTHHHHHH
T ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHC--CEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEECCCHHHCCHHHHHHHH
T ss_conf             95999971689889999998767767518--8999951357888689999999999819859973844324557898762


Q ss_pred             HCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH
Q ss_conf             18938975007988875407999848992899999600005883325989999999863413689988999625762289
Q gi|254780659|r   81 RHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSE  160 (274)
Q Consensus        81 ~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSE  160 (274)
                      + ++||||+|||+++||+||.+|+. +|+|++|+|||||+||.+ +||||+++|+++++    .++|+||||||||||||
T Consensus        79 ~-~~ilRP~N~~~~~PG~G~~i~~~-~g~~i~Vinl~Gr~fM~~-~d~PF~~~d~~l~~----~~~~~iiVDfHaEaTSE  151 (252)
T 2z06_A           79 S-EPVVRPLNYPPGTPGKGFWRLEV-GGESLLFVQVMGRIFMDP-LDDPFRALDRLLEE----EKADYVLVEVHAEATSE  151 (252)
T ss_dssp             H-SSEECCTTSCSSCSSCSEEEEEE-TTEEEEEEEEECCTTSCC-CCCHHHHHHHHHHH----CCCSEEEEEEECSCHHH
T ss_pred             C-CHHCCCCCCCCCCCCCEEEEECC-CCCEEEEEEEEHHHCCCC-CCCHHHHHHHHHHH----CCCCEEEEECCCCHHHH
T ss_conf             0-11125011168999870699735-994799998003345998-89979999999974----68967999867750789


Q ss_pred             HHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEE
Q ss_conf             99999760895779980697624654564036728984056013712103547467898885168865411157871999
Q gi|254780659|r  161 KQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCGDYNSSIGLDKEEPINRFITQIPRNRFVIANGPATLC  240 (274)
Q Consensus       161 K~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG~~~SVIG~~~~~~i~rf~t~~p~~r~~~a~g~~~l~  240 (274)
                      |+|||||||||||||+||||||||||+||||+|||||||+||||||||||||+++.+|+||++++|. ||++|+|+++||
T Consensus       152 K~A~g~~lDGrvsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG~~~SVIG~~~~~~i~rf~t~~p~-rf~~a~g~~~l~  230 (252)
T 2z06_A          152 KMALAHYLDGRASAVLGTHTHVPTLDATRLPKGTLYQTDVGMTGTYHSIIGGEVETFLARFLTGRPQ-PFRAAQGKARFH  230 (252)
T ss_dssp             HHHHHHHHBTTBSEEEEESSCSCBSCCEECTTSCEEESCCCCBEESSSBTTBCHHHHHHHHHHCSCC-CCCBCCSCEEEE
T ss_pred             HHHHHHHCCCCEEEEEECCCCCCCCCCEECCCCEEEEECCCCCCCCCCEECCCHHHHHHHHHHCCCC-CCCCCCCCCEEE
T ss_conf             9998976069689998567665566445747980998168555575135055727899999708998-761479986999


Q ss_pred             EEEEEEECCCCCEEEEEEEEEC
Q ss_conf             9999984799867467899876
Q gi|254780659|r  241 GICAEISDVTGLAEKIAPIRIG  262 (274)
Q Consensus       241 gv~ieid~~tG~a~~I~ri~ig  262 (274)
                      ||++++|  ||||++|+|||++
T Consensus       231 gv~i~~~--tg~a~~I~ri~~~  250 (252)
T 2z06_A          231 ATELVFE--GGRPVAISPYVWE  250 (252)
T ss_dssp             EEEEEEE--TTEEEEEEEEEEE
T ss_pred             EEEEEEC--CCCEEEEEEEEEC
T ss_conf             9999907--9988888999845


No 4  
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=98.91  E-value=1.6e-07  Score=68.24  Aligned_cols=180  Identities=16%  Similarity=0.199  Sum_probs=122.0

Q ss_pred             EEEEEEECCCH----------------HHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCC-----HHHHHHHHHCCC
Q ss_conf             26999720276----------------889999998089888609989999170047886789-----999999983799
Q gi|254780659|r    2 RLLFLGDIVGK----------------TGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGIT-----EKIFCEMMETGI   60 (274)
Q Consensus         2 kiLfiGDIvG~----------------~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git-----~~~~~~l~~~Gv   60 (274)
                      +||..-|+-|.                .|--.+...+.++|++..--+++-+|.+- .|..++     ...++-|-.+|.
T Consensus         8 tILhtnD~Hg~l~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~~~l~ldaGD~~-~Gs~~s~~~~g~~~~~~mn~~g~   86 (509)
T 3ive_A            8 TIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYF-TGPYISSLTKGKAIIDIMNTMPF   86 (509)
T ss_dssp             EEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCS-SSSHHHHTTTTHHHHHHHTTSCC
T ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCC-CCCHHHHHHCCHHHHHHHHCCCC
T ss_conf             99998436546425687302478766475999999999998639698999789887-77188877599899999874599


Q ss_pred             CEEEECHHHHCCC--CHHHHHHHCCCEEEECCC--C-CC--CCCCCEEEEECCCCCEEEEEEEEHHH----CCC------
Q ss_conf             8999342653022--204754218938975007--9-88--87540799984899289999960000----588------
Q gi|254780659|r   61 DVITTGNHVWDKR--EALVFSQRHCKFLRPANY--P-PN--TPGNGSGLYCAKNGSNVLVANIMGRV----FMN------  123 (274)
Q Consensus        61 DviT~GNH~wd~k--ei~~~i~~~~~ilRP~N~--p-~~--~PG~G~~i~~~~~g~ki~Vinl~Gr~----fM~------  123 (274)
                      |++|.|||=||.-  .+..++++.+.-+--+|.  . ..  ...+-|.+++ ++|.||+|+-+....    ...      
T Consensus        87 Da~~lGNHEFD~G~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~~~i~~-~~G~kIgviGl~~~~~~~~~~~~~~~~~  165 (509)
T 3ive_A           87 DAVTIGNHEFDHGWDNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIE-KDGVKIGVIGLHGVFAFNDTVSAATRVG  165 (509)
T ss_dssp             SEECCCGGGGTTCHHHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEE-ETTEEEEEEEEECHHHHHHHSCGGGCTT
T ss_pred             CEEEECHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEE-ECCEEEEEEEEECCCCCCCCCCCCCCCC
T ss_conf             899984451365889999999758997784454323454646788869999-8998999998734555776335666676


Q ss_pred             CCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCC---------------CHHHHHHHHHHHCCCEEEEEECCCCCCCCH
Q ss_conf             332598999999986341368998899962576---------------228999999760895779980697624654
Q gi|254780659|r  124 PLLDDPFRTADKILATCPLKEQADVIVFDFHAE---------------TTSEKQCFAHFVDSRASLVVGTHTHIPTAD  186 (274)
Q Consensus       124 ~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaE---------------aTSEK~A~g~~lDGrVsaVvGTHTHV~TaD  186 (274)
                      -...+|..++.+.++++  +.++|+|++=.|.=               +-.+..+++-.++| +.+++|-|+|.....
T Consensus       166 ~~~~d~v~~~~~~v~~l--k~~~D~II~L~H~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-iD~ilgGH~H~~~~~  240 (509)
T 3ive_A          166 IEARDEIKWLQRYIDEL--KGKVDLTVALIHEGVPARQSSMGGTDVRRALDKDIQTASQVKG-LDILITGHAHVGTPE  240 (509)
T ss_dssp             EEECCHHHHHHHHHHHH--TTTCSEEEEEEECSSCCCCCCC---CCCCCCHHHHHHHHHCSS-CCEEEEESSCCCCSS
T ss_pred             EEECCHHHHHHHHHHHH--HCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC-CCEEECCCCCCCCCC
T ss_conf             27768999999998863--3358789997535745445566764210123567887613899-876852788756655


No 5  
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus HB8} SCOP: d.114.1.1 d.159.1.2
Probab=98.90  E-value=1.6e-07  Score=68.18  Aligned_cols=179  Identities=16%  Similarity=0.099  Sum_probs=127.4

Q ss_pred             EEEEEEECCCHH---------------HHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCC-----HHHHHHHHHCCCC
Q ss_conf             269997202768---------------89999998089888609989999170047886789-----9999999837998
Q gi|254780659|r    2 RLLFLGDIVGKT---------------GRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGIT-----EKIFCEMMETGID   61 (274)
Q Consensus         2 kiLfiGDIvG~~---------------Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git-----~~~~~~l~~~GvD   61 (274)
                      .||..-|+-|.-               |.-.+...+.++|++..--+++-+|.+.. |..++     ....+-|-.+|.|
T Consensus        31 tILhtnD~HG~l~~~~~~~~~~~~~~gG~arlat~i~~~r~~~~~~L~ld~GD~~~-Gs~~s~~~~G~~~~~~~n~~g~D  109 (552)
T 2z1a_A           31 TLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQ-GTLYFNQYRGLADRYFMHRLRYR  109 (552)
T ss_dssp             EEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSS-SSHHHHHHTTHHHHHHHHHTTCC
T ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCC-CCHHHHHHCCHHHHHHHHCCCCC
T ss_conf             99997346458636455546777764759999999999997697929997898777-63998860981799998656988


Q ss_pred             EEEECHHHHCC--CCHHHHHHHCCCEEEECCCCC-C---CC--CCCEEEEECCCCCEEEEEEEEHHHCC-------CCCC
Q ss_conf             99934265302--220475421893897500798-8---87--54079998489928999996000058-------8332
Q gi|254780659|r   62 VITTGNHVWDK--REALVFSQRHCKFLRPANYPP-N---TP--GNGSGLYCAKNGSNVLVANIMGRVFM-------NPLL  126 (274)
Q Consensus        62 viT~GNH~wd~--kei~~~i~~~~~ilRP~N~p~-~---~P--G~G~~i~~~~~g~ki~Vinl~Gr~fM-------~~~~  126 (274)
                      ++|.|||=||.  ..+..++.+.+.=+=-+|.-. .   .+  -..|.+++ .+|.||+|+-+...-.+       ....
T Consensus       110 a~~lGNHEfd~G~~~l~~~~~~~~fp~L~aNv~~~~~~~~~~~~~~y~i~~-~~g~kVgviGl~~~~~~~~~~~~~~~~~  188 (552)
T 2z1a_A          110 AMALGNHEFDLGPGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVV-VGGERVGIIGLTTPDTREISNPGPTVAF  188 (552)
T ss_dssp             EEECCGGGGTTCHHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEE-ETTEEEEEEEEECTTHHHHSCCCTTCEE
T ss_pred             EEEECHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEE-ECCCEEEEEEEECCCCCCCCCCCCCEEE
T ss_conf             897640421268899999998669988874200466643466668549997-0785799997504542110256771575


Q ss_pred             CCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCC
Q ss_conf             59899999998634136899889996257622899999976089577998069762465
Q gi|254780659|r  127 DDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCFAHFVDSRASLVVGTHTHIPTA  185 (274)
Q Consensus       127 d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A~g~~lDGrVsaVvGTHTHV~Ta  185 (274)
                      .+|..++.+.+.+.. ++++|+|++=-|.-.. |-..++..++| +.+++|-|||..-.
T Consensus       189 ~d~~~~~~~~v~~~~-~~~~DviV~lsH~g~~-~d~~la~~~~~-id~IlgGHsH~~~~  244 (552)
T 2z1a_A          189 LDPYESAQKAVYELL-AKGVNKIVVLSHLGYG-EDLKLARRLVG-VQVIVGGHSHTLLG  244 (552)
T ss_dssp             CCHHHHHHHHHHHHH-HTTCCCEEEEEESCHH-HHHHHHTTCSS-CCEEEECSSCCCBS
T ss_pred             CCHHHHHHHHHHHHH-HCCCCEEEEEECCCCH-HHHHHHHHCCC-CCEEECCCCCEECC
T ss_conf             558999999999998-4699879998258847-89999982888-64010574000002


No 6  
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=98.86  E-value=1.6e-07  Score=68.18  Aligned_cols=184  Identities=17%  Similarity=0.119  Sum_probs=120.6

Q ss_pred             EEEEEEECCCH--------------HHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCC-----------------CHH
Q ss_conf             26999720276--------------88999999808988860998999917004788678-----------------999
Q gi|254780659|r    2 RLLFLGDIVGK--------------TGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGI-----------------TEK   50 (274)
Q Consensus         2 kiLfiGDIvG~--------------~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Gi-----------------t~~   50 (274)
                      +||-.-|+-|+              .|.-.+...+.++|+++. +.+++.+-..-.|--+                 ...
T Consensus        13 ~il~tnD~Hg~l~~~~~~~~~~~~~gG~arl~t~i~~~r~~~~-~~l~ldaGD~~~Gs~~~~~~~~~~~~~~~~~~~g~~   91 (341)
T 3gve_A           13 SILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNP-NTLLVDNGDLIQGNPLGEYAVKYQKDDIISGTKTHP   91 (341)
T ss_dssp             EEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCS-SEEEEECSCCSCSSHHHHHHHHHHHHHHHHTSSCCH
T ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCH
T ss_conf             9999776656865756667777676649999999999996599-879997786567860255543203443322446708


Q ss_pred             HHHHHHHCCCCEEEECHHHHCCC--CHHHHHHHCCCEEEECCCCC--CC----CC--CCEEEEEC---CCCCEEEEEEEE
Q ss_conf             99999837998999342653022--20475421893897500798--88----75--40799984---899289999960
Q gi|254780659|r   51 IFCEMMETGIDVITTGNHVWDKR--EALVFSQRHCKFLRPANYPP--NT----PG--NGSGLYCA---KNGSNVLVANIM  117 (274)
Q Consensus        51 ~~~~l~~~GvDviT~GNH~wd~k--ei~~~i~~~~~ilRP~N~p~--~~----PG--~G~~i~~~---~~g~ki~Vinl~  117 (274)
                      ..+-|-.+|.|++|.|||-||..  .+..+++..+.=+=-+|...  +.    |-  ..+.++..   .+|.||+|+-+.
T Consensus        92 ~~~~~n~~g~Da~~~GNHEfd~G~~~l~~~~~~~~~p~l~aNv~~~~~~~~~~p~~~~~~~~~~~~g~~~g~kIgviG~~  171 (341)
T 3gve_A           92 IISVMNALKYDAGTLGNHEFNYGLDFLDGTIKGADFPIVNANVKTTSGENRYTPYVINEKTLIDENGNEQKVKVGYIGFV  171 (341)
T ss_dssp             HHHHHHHTTCCBEECCGGGGTTCHHHHHHHHHTCSSCEECSSEECTTSCBSSCCEEEEEEEEECTTSCEEEEEEEEEEEC
T ss_pred             HHHHHHHCCCCEEECCHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCC
T ss_conf             99998704887672251530257899999983478976877646378873667753340699985385103899995556


Q ss_pred             HHHCC---------CCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCC---------HHHHHHHHHHHCCCEEEEEECC
Q ss_conf             00058---------83325989999999863413689988999625762---------2899999976089577998069
Q gi|254780659|r  118 GRVFM---------NPLLDDPFRTADKILATCPLKEQADVIVFDFHAET---------TSEKQCFAHFVDSRASLVVGTH  179 (274)
Q Consensus       118 Gr~fM---------~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEa---------TSEK~A~g~~lDGrVsaVvGTH  179 (274)
                      ..-..         .-.+.+|..++.+.+++.+ .+.+|+|++=.|.--         .-+-..++-.++| |.+|+|-|
T Consensus       172 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~-~~g~DiiV~lsH~G~~~d~~~~~~~~~~~~la~~~~g-vD~IlgGH  249 (341)
T 3gve_A          172 PPQIMTWDKKNLEGQVQVQDIVESANETIPKMK-AEGADVIIALAHTGIEKQAQSSGAENAVFDLATKTKG-IDAIISGH  249 (341)
T ss_dssp             CTTHHHHTHHHHTTTCEECCHHHHHHHHHHHHH-HTTCSEEEEEECCCCCSSCCCTTCSSCHHHHHHHCSC-CCEEEECS
T ss_pred             CCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHH-HCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCC-CCEEEECC
T ss_conf             865332346566576112559999999997666-4499889998516844443345544178899855999-64899798


Q ss_pred             CCCCCCHHH
Q ss_conf             762465456
Q gi|254780659|r  180 THIPTADAQ  188 (274)
Q Consensus       180 THV~TaD~r  188 (274)
                      +|.......
T Consensus       250 sH~~~~~~~  258 (341)
T 3gve_A          250 QHGLFPSAE  258 (341)
T ss_dssp             SCCEESCGG
T ss_pred             CCCCCCCCC
T ss_conf             886566765


No 7  
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=98.85  E-value=2.7e-07  Score=66.77  Aligned_cols=182  Identities=18%  Similarity=0.203  Sum_probs=114.6

Q ss_pred             CEEEEEEECCCH--------HHHHHHHHHHHHHHHH---CCCC-EEEECCEECCCCCCCC-----HHHHHHHHHCCCCEE
Q ss_conf             926999720276--------8899999980898886---0998-9999170047886789-----999999983799899
Q gi|254780659|r    1 MRLLFLGDIVGK--------TGRSIVYEMLPRLIRD---FQLD-FVIANGENSAGGFGIT-----EKIFCEMMETGIDVI   63 (274)
Q Consensus         1 MkiLfiGDIvG~--------~Gr~~v~~~Lp~l~~~---~~~D-fvIaNgENaa~G~Git-----~~~~~~l~~~GvDvi   63 (274)
                      ++||..-|+-|.        .|...+...+..+|++   ..++ +++-+|..- .|..++     .-.++-|-.+|+|++
T Consensus         9 l~IlhtnD~Hg~~~~~~~~~~g~~~~~~~i~~~r~~~~~~~~~~l~ld~GD~~-~gs~~s~~~~g~~~~~~mn~~g~Da~   87 (516)
T 1hp1_A            9 ITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDIN-TGVPESDLQDAEPDFRGMNLVGYDAM   87 (516)
T ss_dssp             EEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCS-SSCHHHHTTTTHHHHHHHHHHTCCEE
T ss_pred             EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC-CCCHHHHHHCCHHHHHHHHCCCCCEE
T ss_conf             99999762224874777777668999999999999986039898999799888-86578777498899999865798699


Q ss_pred             EECHHHHCCC--CHHHHHHHCCCEEEECCCCC---CC-CCCCEEEEECCCCCEEEEEEEEHHHCC---CC------CCCC
Q ss_conf             9342653022--20475421893897500798---88-754079998489928999996000058---83------3259
Q gi|254780659|r   64 TTGNHVWDKR--EALVFSQRHCKFLRPANYPP---NT-PGNGSGLYCAKNGSNVLVANIMGRVFM---NP------LLDD  128 (274)
Q Consensus        64 T~GNH~wd~k--ei~~~i~~~~~ilRP~N~p~---~~-PG~G~~i~~~~~g~ki~Vinl~Gr~fM---~~------~~d~  128 (274)
                      |.|||=||..  .+..++...+.-.--+|.-.   .. ..+-|.|++ ++|.||+|+-+...-..   .|      .+.+
T Consensus        88 ~~GNHEFD~G~~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~py~I~~-~~g~kIgiIG~~~~~~~~~~~~~~~~~~~f~d  166 (516)
T 1hp1_A           88 AIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFK-RQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRK  166 (516)
T ss_dssp             ECCGGGGSSCHHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEE-ETTEEEEEEEEECTTTTTSSSCCSCTTEEECC
T ss_pred             EECCHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEEE-ECCEEEEEECCCCCCCCCCCCCCCCCCCEECC
T ss_conf             98804224688999999964799888635530003644557569997-66827543133334541124755556734558


Q ss_pred             HHHHHHHHHHHCCCCCCCCEEEEECCCCCHH-----------HHHHHHHHHCCCEEEEEECCCCCCCC
Q ss_conf             8999999986341368998899962576228-----------99999976089577998069762465
Q gi|254780659|r  129 PFRTADKILATCPLKEQADVIVFDFHAETTS-----------EKQCFAHFVDSRASLVVGTHTHIPTA  185 (274)
Q Consensus       129 PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTS-----------EK~A~g~~lDGrVsaVvGTHTHV~Ta  185 (274)
                      |..++.+.++++...+.+|+|++=.|.-...           ...|.+-. .+.+.+++|-|+|..-.
T Consensus       167 ~~~~~~~~~~~l~~~~~~DiII~l~H~G~~~d~~~~~~~~~~~~~a~~~~-~~~iD~IlgGHsH~~~~  233 (516)
T 1hp1_A          167 PADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALP-AGSLAMIVGGHSQDPVC  233 (516)
T ss_dssp             HHHHHHHHHHHHHHHTCCSEEEEEEESCCCGGGCCTTSCCCHHHHHHHSC-TTSSSEEECCSSCCBCC
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHCC-CCCCEEEECCCCCCCCC
T ss_conf             99999999999876158988999640254455433334772188897356-78853998577764333


No 8  
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein structure initiative, PSI-2; 1.90A {Candida albicans SC5314} SCOP: d.114.1.1 d.159.1.2
Probab=98.80  E-value=1.7e-07  Score=68.02  Aligned_cols=187  Identities=17%  Similarity=0.170  Sum_probs=109.7

Q ss_pred             EEEEEEECCCH--------------HHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCC-------HHHHHHHHHCCC
Q ss_conf             26999720276--------------889999998089888609989999170047886789-------999999983799
Q gi|254780659|r    2 RLLFLGDIVGK--------------TGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGIT-------EKIFCEMMETGI   60 (274)
Q Consensus         2 kiLfiGDIvG~--------------~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git-------~~~~~~l~~~Gv   60 (274)
                      +||-.=|+=|.              .+--.+.+++.+..++.+.|.+++.+--.-.|-|+.       ...++-+-.+|.
T Consensus        17 ~iLHTnD~HG~l~~h~~~~~~~ad~G~~~s~~~~~r~~a~~~~~d~LllDaGD~~qGt~lsd~t~~kG~~~~~i~n~~gy   96 (557)
T 3c9f_A           17 NFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFIKQDY   96 (557)
T ss_dssp             EEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHTTSCC
T ss_pred             EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHCCCCCHHHHHHHHCCCC
T ss_conf             99982456779866566445567616799999999999986399989997887778850512115488899999877798


Q ss_pred             CEEEECHHHHCCCC-----HHHHHHHCCCEEEECCC---C---CCCC-CCCEEEEECC-CCCEEEEEEEEHHHC--CC-C
Q ss_conf             89993426530222-----04754218938975007---9---8887-5407999848-992899999600005--88-3
Q gi|254780659|r   61 DVITTGNHVWDKRE-----ALVFSQRHCKFLRPANY---P---PNTP-GNGSGLYCAK-NGSNVLVANIMGRVF--MN-P  124 (274)
Q Consensus        61 DviT~GNH~wd~ke-----i~~~i~~~~~ilRP~N~---p---~~~P-G~G~~i~~~~-~g~ki~Vinl~Gr~f--M~-~  124 (274)
                      |++|.|||=||..+     ...+++..+.=.=-+|.   +   ...| |.-|..++.+ +|.||+++-++...-  -. .
T Consensus        97 Da~tlGNHEFd~g~~~~~~~~~~~~~~~fp~LsaNv~~~~~~~~~~p~~~~y~~~~t~~~G~kIgviG~l~d~~~~~~~~  176 (557)
T 3c9f_A           97 DLLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFLFDFKRFNSGT  176 (557)
T ss_dssp             SEECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECCCCCCCCCTTE
T ss_pred             CEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCC
T ss_conf             99973654777661189999999875289868767761577655565456714999832898999985343566578886


Q ss_pred             CCCCHHHHHHH--HHHHCCCCCCCCEEEEECCCC-------CHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCC
Q ss_conf             32598999999--986341368998899962576-------228999999760895779980697624654564036
Q gi|254780659|r  125 LLDDPFRTADK--ILATCPLKEQADVIVFDFHAE-------TTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDG  192 (274)
Q Consensus       125 ~~d~PF~~~d~--~l~~~~~~~~~~~i~VDfHaE-------aTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~  192 (274)
                      ....+..++++  +.+.  +++++|+|+|=-|.-       ......+++-...+.+.+++|=|||+..  ...+.+
T Consensus       177 ~v~~~~~~i~~~~~~e~--~~~~vD~IVvLsH~g~~~d~~e~~~v~~~i~~~~~d~id~I~GGHSH~r~--~~~~d~  249 (557)
T 3c9f_A          177 RVTPMAETIHEPWFQEA--LKHEVDLIIIVGHTPISHNWGEFYQVHQYLRQFFPDTIIQYFGGHSHIRD--FTVFDS  249 (557)
T ss_dssp             EECCHHHHTTSHHHHHH--TTSCCSEEEEECSSCCCTTTCHHHHHHHHHHHHCTTSEEEEEECSSCCEE--EEEEET
T ss_pred             EECCHHHHHHHHHHHHH--HHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCC--CCCCCC
T ss_conf             77888999998999998--75689989998623755676305679999997589987699818878777--644358


No 9  
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=98.65  E-value=6.2e-07  Score=64.41  Aligned_cols=185  Identities=13%  Similarity=0.068  Sum_probs=120.0

Q ss_pred             CEEEEEEECCCH--------------HHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCH-------------HHHH
Q ss_conf             926999720276--------------8899999980898886099899991700478867899-------------9999
Q gi|254780659|r    1 MRLLFLGDIVGK--------------TGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITE-------------KIFC   53 (274)
Q Consensus         1 MkiLfiGDIvG~--------------~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~-------------~~~~   53 (274)
                      ++||..-|+=|+              .|.-.+...+.++|++.. +.+++++-..-.|..+..             -.++
T Consensus         9 l~il~tnD~Hg~l~~~~~~~~~~~~~gG~arlat~i~~~r~~~~-~~l~ldaGD~~~Gs~~~~~~~~~~~~~~~~~~~~~   87 (339)
T 3jyf_A            9 LRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVK-NSVLVDNGDVIQGSPLGDYMAAKGLKEGDVHPVYK   87 (339)
T ss_dssp             EEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCS-CEEEEECSCCSSSSHHHHHHHHHCCCTTCCCHHHH
T ss_pred             EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CEEEEEECCCCCCCCHHHHHCCCCCCCCCCCHHHH
T ss_conf             99999665656875756567777675629999999999997688-96999848778883008763253113455316999


Q ss_pred             HHHHCCCCEEEECHHHHCCC--CHHHHHHHCCCEEEECCCCCCCC----CCCEEEEEC--------CCCCEEEEEEEEHH
Q ss_conf             99837998999342653022--20475421893897500798887----540799984--------89928999996000
Q gi|254780659|r   54 EMMETGIDVITTGNHVWDKR--EALVFSQRHCKFLRPANYPPNTP----GNGSGLYCA--------KNGSNVLVANIMGR  119 (274)
Q Consensus        54 ~l~~~GvDviT~GNH~wd~k--ei~~~i~~~~~ilRP~N~p~~~P----G~G~~i~~~--------~~g~ki~Vinl~Gr  119 (274)
                      -|-.+|.|+.|.|||=||.-  .+..+++..+.-.=-+|+-....    -..|.+.+.        .+|.||+|+-+...
T Consensus        88 ~~n~~g~Da~~~GNHEFD~G~~~l~~~~~~~~~p~l~aNv~~~~~~~~~~~py~i~~~~v~~~~g~~~g~kIgviG~~~~  167 (339)
T 3jyf_A           88 AMNTLNYAVGNLGNHEFNYGLDFLHKALAGAKFPYVNANIIDAKTGKPMFTPYLIQDTRVVDSDGQIHTLRIGYIGFVPP  167 (339)
T ss_dssp             HHTTSCCSEEECCGGGGTTCHHHHHHHHHTCSSCEECSSEEETTTSSBSSCCEEEEEEEEECTTSCEEEEEEEEEEECCT
T ss_pred             HHHHCCCCEEECCHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCC
T ss_conf             99755988161124766527999999974067987766403366787277886012068875155133369988605776


Q ss_pred             H---------CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH--------HHHHHHHCCCEEEEEECCCCC
Q ss_conf             0---------58833259899999998634136899889996257622899--------999976089577998069762
Q gi|254780659|r  120 V---------FMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSEK--------QCFAHFVDSRASLVVGTHTHI  182 (274)
Q Consensus       120 ~---------fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK--------~A~g~~lDGrVsaVvGTHTHV  182 (274)
                      -         .=.-.+.+|..++.+.+++++ .+.+|+|++=.|.--...+        ..++--++| +.+|+|-|||.
T Consensus       168 ~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~-~~g~D~iI~l~H~G~~~d~~~~~~~~~~~~a~~~~g-iD~IlgGHsH~  245 (339)
T 3jyf_A          168 QIMTWDKANLNGKVTVNDITETARKYIPEMR-AKGADVVVVVAHSGLSADPYQAMAENSVYYLSQVPG-VDAIMFGHAHA  245 (339)
T ss_dssp             THHHHTHHHHTTTEEECCHHHHHHHHHHHHH-HTTCSEEEEEECCCCCCSCCCTTCSCCHHHHTTSTT-CCEEEECSSCS
T ss_pred             CCCCCCCCCCCCCCEECCHHHHHHHHHHHHH-HCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC-CCEEEECCCCC
T ss_conf             6432545455687207889999999997665-528983220334485666332234326889846899-87899698876


Q ss_pred             CCCHHH
Q ss_conf             465456
Q gi|254780659|r  183 PTADAQ  188 (274)
Q Consensus       183 ~TaD~r  188 (274)
                      .-....
T Consensus       246 ~~~~~~  251 (339)
T 3jyf_A          246 VFPGKD  251 (339)
T ss_dssp             EESSGG
T ss_pred             CCCCCC
T ss_conf             465776


No 10 
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=98.61  E-value=4.1e-06  Score=59.10  Aligned_cols=167  Identities=13%  Similarity=0.074  Sum_probs=117.8

Q ss_pred             HHHHHHHHHHHHHHHC---CCCEEEECCEECCCCCCCC-----HHHHHHHHHCCCCEEEECHHHHCCC--CHHHHHHHCC
Q ss_conf             8999999808988860---9989999170047886789-----9999999837998999342653022--2047542189
Q gi|254780659|r   14 GRSIVYEMLPRLIRDF---QLDFVIANGENSAGGFGIT-----EKIFCEMMETGIDVITTGNHVWDKR--EALVFSQRHC   83 (274)
Q Consensus        14 Gr~~v~~~Lp~l~~~~---~~DfvIaNgENaa~G~Git-----~~~~~~l~~~GvDviT~GNH~wd~k--ei~~~i~~~~   83 (274)
                      |--.+...+.++|++.   .++.++.++-..-.|..++     ....+-+-.+|+|++| |||=||..  .+.+++++.+
T Consensus       103 G~arlatli~~~R~~~~a~~~n~LlldaGD~~qGs~~s~~~~G~~~v~~mN~lG~Da~~-GNHEFd~G~~~L~~~~~~~~  181 (562)
T 2wdc_A          103 GMGALTALIRDQKARVEAEGGKALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVGVDHMV-SHWEWTLGRERVEELLGLFR  181 (562)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTCCEEEEECSCCSSSSHHHHHHTTHHHHHHHHHHTCCEEC-CSGGGGGCHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHHCCCCEEE-CCCCCCCCHHHHHHHHHHCC
T ss_conf             89999999999999986049987999679778771888874887899999736975885-36213468888999997569


Q ss_pred             CEEEECCCCC---CCC-CCCEEEEECCCCCEEEEEEEEHHHC---------CCCCCCCHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf             3897500798---887-5407999848992899999600005---------88332598999999986341368998899
Q gi|254780659|r   84 KFLRPANYPP---NTP-GNGSGLYCAKNGSNVLVANIMGRVF---------MNPLLDDPFRTADKILATCPLKEQADVIV  150 (274)
Q Consensus        84 ~ilRP~N~p~---~~P-G~G~~i~~~~~g~ki~Vinl~Gr~f---------M~~~~d~PF~~~d~~l~~~~~~~~~~~i~  150 (274)
                      .-+--+|.-.   +.| =..|.+++ .+|.||+|+-+.-...         ..-...+|.+++.+.++++. .+.+|+|+
T Consensus       182 fp~L~aNv~~~~~~~~~~~py~i~~-~~G~kVgvIG~t~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~lr-~~g~DvIV  259 (562)
T 2wdc_A          182 GEFLSYNIVDDLFGDPLFPAYRIHR-VGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKAR-AEGANAVV  259 (562)
T ss_dssp             SEECCSSCEETTTCCBSSCSEEEEE-ETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHH-HTTCSEEE
T ss_pred             CCEEECCCCCCCCCCCCCCCEEEEE-ECCEEEEEECCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHH-HCCCCEEE
T ss_conf             9777511100345782677659999-899899984235776420245345577357789999999999987-53898899


Q ss_pred             EECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCC
Q ss_conf             96257622899999976089577998069762465
Q gi|254780659|r  151 FDFHAETTSEKQCFAHFVDSRASLVVGTHTHIPTA  185 (274)
Q Consensus       151 VDfHaEaTSEK~A~g~~lDGrVsaVvGTHTHV~Ta  185 (274)
                      +=-|.-- .+-.+++-.++| +.+++|-|||-...
T Consensus       260 ~LsH~G~-~~d~~la~~v~g-IDvIlgGHtH~~~~  292 (562)
T 2wdc_A          260 LLSHNGM-QLDAALAERIRG-IDLILSGHTHDLTP  292 (562)
T ss_dssp             EEECSCH-HHHHHHHTTSSS-CCEEEECSSCCCCS
T ss_pred             EEECCCC-CCCHHHHHHCCC-CCEEEECCCCCCCE
T ss_conf             9605785-310678862257-40898266776410


No 11 
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=96.62  E-value=0.045  Score=32.91  Aligned_cols=183  Identities=13%  Similarity=-0.011  Sum_probs=92.4

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCC--CHHHHHHHHHCCCCEE-EECHHHHC----CC
Q ss_conf             92699972027688999999808988860998999917004788678--9999999983799899-93426530----22
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGI--TEKIFCEMMETGIDVI-TTGNHVWD----KR   73 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Gi--t~~~~~~l~~~GvDvi-T~GNH~wd----~k   73 (274)
                      ++||.++||=|.-  +++++.|..++ +.++|+||..|.-...|.--  .....+.|..+++.++ ..|||=|.    .+
T Consensus         6 ~~i~~~~d~hg~~--~ale~~l~~~~-~~~~D~vv~~GDl~~~~~~~~~~~~~~~~l~~~~~pv~~v~GNHD~~~~~~~~   82 (228)
T 1uf3_A            6 RYILATSNPMGDL--EALEKFVKLAP-DTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIWEYLR   82 (228)
T ss_dssp             CEEEEEECCTTCH--HHHHHHHTHHH-HHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEECCTTSCSHHHHHH
T ss_pred             EEEEEEECCCCCH--HHHHHHHHHHH-HHCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH
T ss_conf             2999995688999--99999999877-72999999878869998782999999997404577589996899816752035


Q ss_pred             CHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEE----EHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEE
Q ss_conf             2047542189389750079888754079998489928999996----000058833259899999998634136899889
Q gi|254780659|r   74 EALVFSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANI----MGRVFMNPLLDDPFRTADKILATCPLKEQADVI  149 (274)
Q Consensus        74 ei~~~i~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl----~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i  149 (274)
                      +........+.......        .+ .+. .++..+..+.-    .+...............+..++..........|
T Consensus        83 ~~~~~~~~~~~~~~~~~--------~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  152 (228)
T 1uf3_A           83 EAANVELVHPEMRNVHE--------TF-TFW-RGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKDYPKI  152 (228)
T ss_dssp             HHHHHHHHCTTEEECBT--------SE-EEE-TTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSCSCCEE
T ss_pred             HHCCCCCCCCCCCCCCC--------EE-EEE-CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf             53142112342200132--------26-884-187778741774467777602323344588999999986640355148


Q ss_pred             EEECCCCC-H-----HHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCC
Q ss_conf             99625762-2-----8999999760895779980697624654564036728984056
Q gi|254780659|r  150 VFDFHAET-T-----SEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLG  201 (274)
Q Consensus       150 ~VDfHaEa-T-----SEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvG  201 (274)
                      ++--|... .     .........-+-++..++-=|||.+..  +  -++|-++ +.|
T Consensus       153 ~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GH~H~~~~--~--~~~~~~i-n~G  205 (228)
T 1uf3_A          153 FLFHTMPYHKGLNEQGSHEVAHLIKTHNPLLVLVAGKGQKHE--M--LGASWVV-VPG  205 (228)
T ss_dssp             EEESSCBCBTTTBTTSBHHHHHHHHHHCCSEEEECCSSCEEE--E--ETTEEEE-ECC
T ss_pred             EEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCE--E--ECCEEEE-ECC
T ss_conf             987138876532334625565555502886799578466613--8--8988999-888


No 12 
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC structure funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=96.49  E-value=0.053  Score=32.40  Aligned_cols=132  Identities=13%  Similarity=0.112  Sum_probs=81.5

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEE-EECHHHHCCCCHHHHH
Q ss_conf             926999720276889999998089888609989999170047886789999999983799899-9342653022204754
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVI-TTGNHVWDKREALVFS   79 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDvi-T~GNH~wd~kei~~~i   79 (274)
                      |||++|.|+=|.  ..++++.|..+++ .++|.||.-|.-.      .++..++|.+....++ ..|||=+.........
T Consensus        26 MKI~iiSDiHgn--~~ale~vl~~~~~-~~~D~vi~lGDiv------~~~~~~~l~~~~~~~~~V~GNhD~~~~~~~~~~   96 (190)
T 1s3l_A           26 MKIGIMSDTHDH--LPNIRKAIEIFND-ENVETVIHCGDFV------SLFVIKEFENLNANIIATYGNNDGERCKLKEWL   96 (190)
T ss_dssp             CEEEEECCCTTC--HHHHHHHHHHHHH-SCCSEEEECSCCC------STHHHHHGGGCSSEEEEECCTTCCCHHHHHHHH
T ss_pred             CEEEEEECCCCC--HHHHHHHHHHHHH-CCCCEEEECCCCC------CHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
T ss_conf             589999808999--6999999999975-5999999878838------989999987347608997276543035577776


Q ss_pred             HHCC--CEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCC
Q ss_conf             2189--38975007988875407999848992899999600005883325989999999863413689988999625762
Q gi|254780659|r   80 QRHC--KFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAET  157 (274)
Q Consensus        80 ~~~~--~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEa  157 (274)
                      .+..  +++         |  -+..++. +|.++.++-  |         .|....+.+++.    .++|          
T Consensus        97 ~~~~~~~~~---------~--~~~~~~~-~~~~i~l~H--g---------~~~~~l~~~~~~----~~~d----------  139 (190)
T 1s3l_A           97 KDINEENII---------D--DFISVEI-DDLKFFITH--G---------HHQSVLEMAIKS----GLYD----------  139 (190)
T ss_dssp             HHHCTTCEE---------E--SEEEEEE-TTEEEEEEE--S---------CCHHHHHHHHHH----SCCS----------
T ss_pred             HHCCCCCCC---------C--CEEEEEE-CCCEEEEEE--C---------CCHHHHHHHHHC----CCCC----------
T ss_conf             531222235---------6--2134675-484899998--9---------812657888642----7976----------


Q ss_pred             HHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEE
Q ss_conf             2899999976089577998069762465456403672898
Q gi|254780659|r  158 TSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYI  197 (274)
Q Consensus       158 TSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayi  197 (274)
                                      .++==|||+|-...   .+||-++
T Consensus       140 ----------------iv~~GHTH~~~~~~---~~~~~~i  160 (190)
T 1s3l_A          140 ----------------VVIYGHTHERVFEE---VDDVLVI  160 (190)
T ss_dssp             ----------------EEEEECSSCCEEEE---ETTEEEE
T ss_pred             ----------------EEEECCCCCCCEEE---ECCEEEE
T ss_conf             ----------------99999957632799---9999999


No 13 
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase, metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=95.72  E-value=0.13  Score=29.99  Aligned_cols=186  Identities=15%  Similarity=0.203  Sum_probs=95.7

Q ss_pred             CEEEEEEEC-------CCHHHHHHHHHHHHHHHHHCCCCEEEECCEEC-CCCCCC-C-HHHHHHH-------HHCCCC-E
Q ss_conf             926999720-------27688999999808988860998999917004-788678-9-9999999-------837998-9
Q gi|254780659|r    1 MRLLFLGDI-------VGKTGRSIVYEMLPRLIRDFQLDFVIANGENS-AGGFGI-T-EKIFCEM-------METGID-V   62 (274)
Q Consensus         1 MkiLfiGDI-------vG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENa-a~G~Gi-t-~~~~~~l-------~~~GvD-v   62 (274)
                      .|++.+||.       ...+.-..+.+.+-++.++.++||||..|.|. +.|..- . ++..+.+       ...++- .
T Consensus         7 ~rf~v~gD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~pdfvl~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~~P~~   86 (313)
T 1ute_A            7 LRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWH   86 (313)
T ss_dssp             EEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCCEE
T ss_pred             EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf             79999946999997544517899999999999863699899989988777888752179999999987533565189879


Q ss_pred             EEECHHHHCCCCHH--HHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCC-------CCCCC-----
Q ss_conf             99342653022204--75421893897500798887540799984899289999960000588-------33259-----
Q gi|254780659|r   63 ITTGNHVWDKREAL--VFSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMN-------PLLDD-----  128 (274)
Q Consensus        63 iT~GNH~wd~kei~--~~i~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~-------~~~d~-----  128 (274)
                      .+.|||-|+.....  .+....++-.-|..|..      .......++..+..+.+=...|..       ...+.     
T Consensus        87 ~~~GNHd~~~~~~~~~~~~~~~~~~~~~~~~y~------~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~  160 (313)
T 1ute_A           87 VLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYR------LRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLA  160 (313)
T ss_dssp             ECCCHHHHHSCHHHHHHGGGTSTTEECCSSSEE------EEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCSCSCHH
T ss_pred             EECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC------EECCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCC
T ss_conf             844765666763222011211545568887644------01046788970699981555687303444445666643422


Q ss_pred             ----HHHHHHHHHHHCCCCCCCCEEEEECCCCC--------HH--HHHHHHHHHCCCEEEEEECCCCCCCCHHHHC-CCC
Q ss_conf             ----89999999863413689988999625762--------28--9999997608957799806976246545640-367
Q gi|254780659|r  129 ----PFRTADKILATCPLKEQADVIVFDFHAET--------TS--EKQCFAHFVDSRASLVVGTHTHIPTADAQIL-DGG  193 (274)
Q Consensus       129 ----PF~~~d~~l~~~~~~~~~~~i~VDfHaEa--------TS--EK~A~g~~lDGrVsaVvGTHTHV~TaD~rIL-p~G  193 (274)
                          -+.-+++.|++    ...+.++|=+|--.        ..  .+...-.+...+|.+++.-|+|.--   |+. .++
T Consensus       161 ~~~~Q~~WL~~~L~~----~~~~~~iv~~hhp~~~~~~~~~~~~~~~~~~~ll~~~~V~~~~~GH~H~~~---~~~~~~~  233 (313)
T 1ute_A          161 LARTQLAWIKKQLAA----AKEDYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQ---YLQDENG  233 (313)
T ss_dssp             HHHHHHHHHHHHHHH----CCCSEEEEECSSCSSCCSSSCCCHHHHHHTHHHHHHTTCSEEEECSSSSEE---EEECTTC
T ss_pred             HHHHHHHHHHHHHHH----CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEE---EEECCCC
T ss_conf             399999999999972----635673899823764446678747788999999997694499958864216---7744899


Q ss_pred             EEEEEC
Q ss_conf             289840
Q gi|254780659|r  194 TGYITD  199 (274)
Q Consensus       194 TayiTD  199 (274)
                      +.|++-
T Consensus       234 ~~~~~~  239 (313)
T 1ute_A          234 LGFVLS  239 (313)
T ss_dssp             CEEEEE
T ss_pred             CEEEEE
T ss_conf             789996


No 14 
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8}
Probab=94.78  E-value=0.24  Score=28.12  Aligned_cols=175  Identities=14%  Similarity=0.122  Sum_probs=90.2

Q ss_pred             CEEEEEEECC-CHH-------------HHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHH------HCCC
Q ss_conf             9269997202-768-------------8999999808988860998999917004788678999999998------3799
Q gi|254780659|r    1 MRLLFLGDIV-GKT-------------GRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMM------ETGI   60 (274)
Q Consensus         1 MkiLfiGDIv-G~~-------------Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~------~~Gv   60 (274)
                      ||||-+.|+= |+.             -+.++.+.+. .-++.++|+||.-|.-...+.-.+......+.      ..++
T Consensus        19 MkilH~SDlHLG~~~~~~~~~~~~~~~~~~~l~~i~~-~a~~~~~D~vliaGDlf~~~~~~~~~~~~~~~~~~~~l~~~~   97 (336)
T 2q8u_A           19 LKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVE-EAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTA   97 (336)
T ss_dssp             EEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHH-HHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHHHS
T ss_pred             CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-HHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf             5898980467998777755415689999999999999-999749999998987777999888999999999999874289


Q ss_pred             CEEE-ECHHHHCCCC-HHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCC--CCCCCHHH-H---
Q ss_conf             8999-3426530222-0475421893897500798887540799984899289999960000588--33259899-9---
Q gi|254780659|r   61 DVIT-TGNHVWDKRE-ALVFSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMN--PLLDDPFR-T---  132 (274)
Q Consensus        61 DviT-~GNH~wd~ke-i~~~i~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~--~~~d~PF~-~---  132 (274)
                      .++. .|||=+.... ....+......+.-.+     ...-+.+ ....|.++.++.+.-.....  ......+. .   
T Consensus        98 ~v~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (336)
T 2q8u_A           98 PVVVLPGNHDWKGLKLFGNFVTSISSDITFVM-----SFEPVDV-EAKRGQKVRILPFPYPDESEALRKNEGDFRFFLES  171 (336)
T ss_dssp             CEEECCC------CHHHHHHHHHHCSSEEECC-----SSSCEEE-ECTTSCEEEEEEECCC-------CCSSHHHHHHHH
T ss_pred             CEEEECCCCCCHHHHCCHHHHHHCCCCCEECC-----CCCCEEE-ECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             78994576464100011002221045500114-----5565688-70279669994366643000123330678899999


Q ss_pred             -HHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHH-----------HHCCCEEEEEECCCCCCC
Q ss_conf             -9999863413689988999625762289999997-----------608957799806976246
Q gi|254780659|r  133 -ADKILATCPLKEQADVIVFDFHAETTSEKQCFAH-----------FVDSRASLVVGTHTHIPT  184 (274)
Q Consensus       133 -~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A~g~-----------~lDGrVsaVvGTHTHV~T  184 (274)
                       ..+++++.  ....+..++-.|....+-+...+.           .+...+..|+--|.|-+.
T Consensus       172 ~l~~~~~~~--~~~~~~~I~~~H~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~GH~H~~~  233 (336)
T 2q8u_A          172 RLNKLYEEA--LKKEDFAIFMGHFTVEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFR  233 (336)
T ss_dssp             HHHHHHHHH--HTCSSEEEEEEESEETTCC--------CCCEECGGGSCTTSSEEEEESCSSCE
T ss_pred             HHHHHHHHH--CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCE
T ss_conf             999999873--26466539987542157666675223765455166631386289927775755


No 15 
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=94.63  E-value=0.27  Score=27.88  Aligned_cols=207  Identities=14%  Similarity=0.091  Sum_probs=90.7

Q ss_pred             CEEEEEEECC-CHH-----H-----HHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHH-------HHHHHHCCCCE
Q ss_conf             9269997202-768-----8-----9999998089888609989999170047886789999-------99998379989
Q gi|254780659|r    1 MRLLFLGDIV-GKT-----G-----RSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKI-------FCEMMETGIDV   62 (274)
Q Consensus         1 MkiLfiGDIv-G~~-----G-----r~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~-------~~~l~~~GvDv   62 (274)
                      ||||-+.|+= |.+     -     ++++++.+... .+.++|+||..|.---.+ -.+.+.       .+.|.+.++.+
T Consensus         1 Mkilh~SD~HlG~~~~~~~~~~~~~~~~~~~~v~~a-~~~~vD~vli~GDlfd~~-~~~~~~~~~~~~~~~~l~~~~ipv   78 (333)
T 1ii7_A            1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIA-VQENVDFILIAGDLFHSS-RPSPGTLKKAIALLQIPKEHSIPV   78 (333)
T ss_dssp             CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHH-HHTTCSEEEEESCSBSSS-SCCHHHHHHHHHHHHHHHTTTCCE
T ss_pred             CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCCEEEECCCCCCCC-CCCHHHHHHHHHHHHHHHHCCCCE
T ss_conf             977999138888887784457999999999999999-873999999898878899-899999999999999998689959


Q ss_pred             -EEECHHHHCC--CCHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCC--CCCC-CHHHHHHHH
Q ss_conf             -9934265302--220475421893897500798887540799984899289999960000588--3325-989999999
Q gi|254780659|r   63 -ITTGNHVWDK--REALVFSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMN--PLLD-DPFRTADKI  136 (274)
Q Consensus        63 -iT~GNH~wd~--kei~~~i~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~--~~~d-~PF~~~d~~  136 (274)
                       +..|||=...  ....+++.....+-...+..... ...+............+......+...  +... .-.......
T Consensus        79 ~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (333)
T 1ii7_A           79 FAIEGNHDRTQRGPSVLNLLEDFGLVYVIGMRKEKV-ENEYLTSERLGNGEYLVKGVYKDLEIHGMKYMSSAWFEANKEI  157 (333)
T ss_dssp             EEECCTTTCCSSSCCHHHHHHHTTSCEECEEESSCC-CSSSEEEEECTTSCEEEEEEETTEEEEEECCCCHHHHHSSTTH
T ss_pred             EEECCCCCCHHCCHHHHHHHHHCCCEEEECCCCCCC-CCEEEECCCCCCCEEEEECCCCCCEEECCCCHHHHHHHHHHHH
T ss_conf             996466662100035788898669648704555444-4405520223652157404667613422320046788999875


Q ss_pred             HHHCCCCCCCCEEEEECCCCCHHHHHHHH--------HHHCCCEEEEEECCCCCCCC----HHHHCCCCEEEEECCCCCC
Q ss_conf             86341368998899962576228999999--------76089577998069762465----4564036728984056013
Q gi|254780659|r  137 LATCPLKEQADVIVFDFHAETTSEKQCFA--------HFVDSRASLVVGTHTHIPTA----DAQILDGGTGYITDLGMCG  204 (274)
Q Consensus       137 l~~~~~~~~~~~i~VDfHaEaTSEK~A~g--------~~lDGrVsaVvGTHTHV~Ta----D~rILp~GTayiTDvGMtG  204 (274)
                      +... .......| +=+|.....-....+        -.+.-.+..|+-=|.|-+..    ...+.=-|+-++++.|=+|
T Consensus       158 ~~~~-~~~~~~~i-~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~GH~H~~~~~~~~~~~i~y~GS~~~~~f~e~~  235 (333)
T 1ii7_A          158 LKRL-FRPTDNAI-LMLHQGVREVSEARGEDYFEIGLGDLPEGYLYYALGHIHKRYETSYSGSPVVYPGSLERWDFGDYE  235 (333)
T ss_dssp             HHHH-CCCCSSEE-EEEECCBHHHHHTTTCCCCSBCGGGSCTTCSEEEEESCSSCEEEEETTEEEEECCCSSCCSGGGCS
T ss_pred             HHHC-CCCCCCCE-EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCCC
T ss_conf             4312-48877736-888631245556677643212210144468779727675873524399369985983122765236


Q ss_pred             CHHHCCCC
Q ss_conf             71210354
Q gi|254780659|r  205 DYNSSIGL  212 (274)
Q Consensus       205 ~~~SVIG~  212 (274)
                      ...+..+.
T Consensus       236 ~~~~~~~~  243 (333)
T 1ii7_A          236 VRYEWDGI  243 (333)
T ss_dssp             EEEEECSS
T ss_pred             CCCCEEEE
T ss_conf             66635999


No 16 
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=94.52  E-value=0.28  Score=27.72  Aligned_cols=194  Identities=18%  Similarity=0.170  Sum_probs=102.7

Q ss_pred             EEEEEEECCCHHHHHHHHHHHHHH-HHHCCCCEEEECCEECCC-CC-CCCHHHHHHH------HHCCCCE-EEECHHHHC
Q ss_conf             269997202768899999980898-886099899991700478-86-7899999999------8379989-993426530
Q gi|254780659|r    2 RLLFLGDIVGKTGRSIVYEMLPRL-IRDFQLDFVIANGENSAG-GF-GITEKIFCEM------METGIDV-ITTGNHVWD   71 (274)
Q Consensus         2 kiLfiGDIvG~~Gr~~v~~~Lp~l-~~~~~~DfvIaNgENaa~-G~-Git~~~~~~l------~~~GvDv-iT~GNH~wd   71 (274)
                      +++++||. |..+-.  ...+..+ +...++||||-.|.++-. |. +-.....+++      +...+-. .+.|||=.+
T Consensus       128 ~f~~~GD~-G~~~~~--~~~~~~~~~~~~~~dfvl~~GD~~Y~~~~~~~~~~~wd~~~~~~~~~~~~~P~~~~~GNHE~~  204 (426)
T 1xzw_A          128 VFGLIGDI-GQTHDS--NTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEID  204 (426)
T ss_dssp             EEEEECSC-TTBHHH--HHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGGGCC
T ss_pred             EEEEECCC-CCCCCH--HHHHHHHHHCCCCCCEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
T ss_conf             65364787-888620--489999987077875899657743046454421578889987767786049669834754556


Q ss_pred             CCC-------HHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf             222-------0475421893897500798887540799984899289999960000588332598999999986341368
Q gi|254780659|r   72 KRE-------ALVFSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKE  144 (274)
Q Consensus        72 ~ke-------i~~~i~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~  144 (274)
                      ...       ...+....   -.|.|-+ +.....|..|+. ++..+.++|  -...... .+.-+.-+++-|++.. +.
T Consensus       205 ~~~~~~~~~~~~~~~~~f---~~~~~~~-~~~~~~~Ysf~~-g~v~fi~ld--s~~~~~~-~~~Q~~WL~~~L~~~~-~~  275 (426)
T 1xzw_A          205 YAPDIGEYQPFVPFTNRY---PTPHEAS-GSGDPLWYAIKR-ASAHIIVLS--SYSGFVK-YSPQYKWFTSELEKVN-RS  275 (426)
T ss_dssp             CBGGGTBCSTTHHHHHHS---CCCCGGG-TCSSTTSEEEEE-TTEEEEECC--TTSCCST-TSHHHHHHHHHHHHCC-TT
T ss_pred             CCCCCCCCCCCCCHHHCC---CCCCCCC-CCCCCCEEEEEC-CEEEEEEEC--CCCCCCC-CHHHHHHHHHHHHHHH-CC
T ss_conf             666655544365277618---8864456-788885599981-728999954--6668765-0499999999999754-33


Q ss_pred             CCCEEEEECCCCC---------HHHH--HHH-HHHHCCCEEEEEECCCCCCC--------------CHHH--HCCCCEEE
Q ss_conf             9988999625762---------2899--999-97608957799806976246--------------5456--40367289
Q gi|254780659|r  145 QADVIVFDFHAET---------TSEK--QCF-AHFVDSRASLVVGTHTHIPT--------------ADAQ--ILDGGTGY  196 (274)
Q Consensus       145 ~~~~i~VDfHaEa---------TSEK--~A~-g~~lDGrVsaVvGTHTHV~T--------------aD~r--ILp~GTay  196 (274)
                      +++.+||=+|-=.         ..|.  .+| -.+..-+|.+|+-=|.|.=.              .+..  --|+||-|
T Consensus       276 ~~~w~iv~~H~P~y~s~~~~~~~~~~~r~~l~~lf~~y~Vdlvl~GH~H~YeRt~pi~~~~~~~~~~~~~~~~~~~g~vy  355 (426)
T 1xzw_A          276 ETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVY  355 (426)
T ss_dssp             TCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEE
T ss_pred             CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf             79759998188864357666667788999999999981971999798556355430227732224676543369997899


Q ss_pred             EECCCCCCCHHH
Q ss_conf             840560137121
Q gi|254780659|r  197 ITDLGMCGDYNS  208 (274)
Q Consensus       197 iTDvGMtG~~~S  208 (274)
                      |+ .|.-|...+
T Consensus       356 iv-~G~gG~~~~  366 (426)
T 1xzw_A          356 IT-IGDGGNSEG  366 (426)
T ss_dssp             EE-ECCSCCTTC
T ss_pred             EE-ECCCCCCCC
T ss_conf             99-745867776


No 17 
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=94.31  E-value=0.13  Score=30.01  Aligned_cols=71  Identities=21%  Similarity=0.291  Sum_probs=52.1

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCC-------CCHHHHHHHHHCCCCEE-EECHHHHCC
Q ss_conf             9269997202768899999980898886099899991700478867-------89999999983799899-934265302
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFG-------ITEKIFCEMMETGIDVI-TTGNHVWDK   72 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~G-------it~~~~~~l~~~GvDvi-T~GNH~wd~   72 (274)
                      |||++|+||=|.  ..++++.|..++++ ++|.+|.-|.-...|.-       ..++..+.+.+....++ -.|||=+..
T Consensus        26 Mki~viSDiHgn--~~ale~vl~~~~~~-~~D~ii~lGDlv~~gp~~~~~~~~~~~~~l~~l~~~~~~~~~V~GNhD~~~  102 (208)
T 1su1_A           26 MKLMFASDIHGS--LPATERVLELFAQS-GAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAHKVIAVRGNCDSEV  102 (208)
T ss_dssp             CEEEEECCCTTB--HHHHHHHHHHHHHH-TCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTGGGEEECCCTTCCHH
T ss_pred             CEEEEEEECCCC--HHHHHHHHHHHHHC-CCCEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCEEEECCCCCHHH
T ss_conf             189999316899--89999999998756-998899916601337652011112809999999854996799647783787


Q ss_pred             CC
Q ss_conf             22
Q gi|254780659|r   73 RE   74 (274)
Q Consensus        73 ke   74 (274)
                      .+
T Consensus       103 ~~  104 (208)
T 1su1_A          103 DQ  104 (208)
T ss_dssp             HH
T ss_pred             HH
T ss_conf             54


No 18 
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national project on protein structural and functional analyses; 1.60A {Aquifex aeolicus VF5} SCOP: d.159.1.6
Probab=93.35  E-value=0.064  Score=31.90  Aligned_cols=70  Identities=17%  Similarity=0.229  Sum_probs=47.9

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCC----------------------------CHHHH
Q ss_conf             92699972027688999999808988860998999917004788678----------------------------99999
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGI----------------------------TEKIF   52 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Gi----------------------------t~~~~   52 (274)
                      |||++|+||=++.  +. -..|..+.++.++|++|..|.-..+|.--                            -.+..
T Consensus         6 ~~i~~isD~h~~~--~~-l~~l~~~~~~~~~D~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (260)
T 2yvt_A            6 RKVLAIKNFKERF--DL-LPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFF   82 (260)
T ss_dssp             CEEEEEECCTTCG--GG-HHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEECCCCCH--HH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH
T ss_conf             5899995379998--99-99999988774999999916878999875899999987645455077502663188999999


Q ss_pred             HHHHHCCCCE-EEECHHHHCCC
Q ss_conf             9998379989-99342653022
Q gi|254780659|r   53 CEMMETGIDV-ITTGNHVWDKR   73 (274)
Q Consensus        53 ~~l~~~GvDv-iT~GNH~wd~k   73 (274)
                      +.+.+.++-+ ...|||-+...
T Consensus        83 ~~~~~~~~~~~~i~GNHD~~~~  104 (260)
T 2yvt_A           83 REIGELGVKTFVVPGKNDAPLK  104 (260)
T ss_dssp             HHHHTTCSEEEEECCTTSCCHH
T ss_pred             HHHHHCCCCEEEECCCCCHHHH
T ss_conf             9998559963886288617665


No 19 
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=92.99  E-value=0.11  Score=30.40  Aligned_cols=66  Identities=23%  Similarity=0.247  Sum_probs=52.1

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHH
Q ss_conf             9269997202768899999980898886099899991700478867899999999837998999342653
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVW   70 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~w   70 (274)
                      +||++||||=|.  ..++++.|.++..+.+.|-+|..|.-...|-. +.++.+.+.+.++-+ -+|||=.
T Consensus        19 gRi~viGDIHG~--~~~L~~lL~~i~~~~~~d~lv~lGDliDrGp~-s~~vl~~l~~~~~~~-v~GNHE~   84 (262)
T 2qjc_A           19 GRVIIVGDIHGC--RAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPD-SFGVVRLLKRLGAYS-VLGNHDA   84 (262)
T ss_dssp             SCEEEECCCTTC--HHHHHHHHHHHTCCTTTSEEEECSCCSSSSSC-HHHHHHHHHHHTCEE-CCCHHHH
T ss_pred             CCEEEEEECCCC--HHHHHHHHHHCCCCCCCCEEEECCCCCCCCCC-CHHHHHHHHCCCCEE-ECCCHHH
T ss_conf             988999950269--89999999964899899989983783179988-399999876466458-4064799


No 20 
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=92.34  E-value=0.11  Score=30.31  Aligned_cols=58  Identities=22%  Similarity=0.292  Sum_probs=39.3

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHH---HHHHHHHHHCCCEEEEEECCCCCCCCHHHHCC
Q ss_conf             2598999999986341368998899962576228---99999976089577998069762465456403
Q gi|254780659|r  126 LDDPFRTADKILATCPLKEQADVIVFDFHAETTS---EKQCFAHFVDSRASLVVGTHTHIPTADAQILD  191 (274)
Q Consensus       126 ~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTS---EK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp  191 (274)
                      ..+|...++.+.+.     .++.  |=||+|++.   +-........-++..++--.|.+..- +..|+
T Consensus        70 v~~P~~~i~~~~~~-----g~d~--I~~H~E~~~~~~~~i~~i~~~g~~~Glal~p~T~~~~~-~~~l~  130 (220)
T 2fli_A           70 VVDPERYVEAFAQA-----GADI--MTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATAL-EPLLD  130 (220)
T ss_dssp             SSSGGGGHHHHHHH-----TCSE--EEEEGGGCSCHHHHHHHHHHTTSEEEEEECTTSCGGGG-GGGTT
T ss_pred             CCCHHHHHHHHHHC-----CCCE--EEECHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCHHH-HHHHH
T ss_conf             17988889999865-----9978--99532332088999999987698699996487640366-61675


No 21 
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=92.19  E-value=0.67  Score=25.30  Aligned_cols=73  Identities=14%  Similarity=0.250  Sum_probs=45.7

Q ss_pred             CEEEEEEECC-C----------------HHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCC---CC----HHHHHHHH
Q ss_conf             9269997202-7----------------68899999980898886099899991700478867---89----99999998
Q gi|254780659|r    1 MRLLFLGDIV-G----------------KTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFG---IT----EKIFCEMM   56 (274)
Q Consensus         1 MkiLfiGDIv-G----------------~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~G---it----~~~~~~l~   56 (274)
                      ++|.+|+|+= +                +-....+++.+..+. +.++||||.+|....++.-   -.    ....+.|.
T Consensus         6 f~f~~isD~h~~~~~~~~~~~~~~~~~~~~s~~~l~~ai~~~~-~~~~dfVv~~GDl~d~~~~~~~~~~~~~~~~~~~~~   84 (322)
T 2nxf_A            6 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWR-RERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELD   84 (322)
T ss_dssp             EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHH-HTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHH
T ss_pred             EEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             7999983178777776523344303456666999999999973-379999999998788988523689999999999998


Q ss_pred             HCCCCE-EEECHHHHCCCC
Q ss_conf             379989-993426530222
Q gi|254780659|r   57 ETGIDV-ITTGNHVWDKRE   74 (274)
Q Consensus        57 ~~GvDv-iT~GNH~wd~ke   74 (274)
                      .+++.+ .+.|||-...-.
T Consensus        85 ~~~~p~~~~~GNHD~~~~~  103 (322)
T 2nxf_A           85 ACSVDVHHVWGNHEFYNFS  103 (322)
T ss_dssp             TTCSEEEECCCHHHHHHCC
T ss_pred             HCCCCEEEECCCCCCCCCC
T ss_conf             6599789826877522233


No 22 
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=90.61  E-value=0.96  Score=24.27  Aligned_cols=185  Identities=15%  Similarity=0.115  Sum_probs=91.1

Q ss_pred             CEEEEEEECC-CHH---------HHHHHHHHHHHHHH-HCCCCEEEECCEECCCCCCCCHHHHHHHH----HCCCCE-EE
Q ss_conf             9269997202-768---------89999998089888-60998999917004788678999999998----379989-99
Q gi|254780659|r    1 MRLLFLGDIV-GKT---------GRSIVYEMLPRLIR-DFQLDFVIANGENSAGGFGITEKIFCEMM----ETGIDV-IT   64 (274)
Q Consensus         1 MkiLfiGDIv-G~~---------Gr~~v~~~Lp~l~~-~~~~DfvIaNgENaa~G~Git~~~~~~l~----~~GvDv-iT   64 (274)
                      |||+-|-|+= +..         -...+++.+..+++ +.++||||..|.-+-.|   +++.|+.+.    +.++.+ ++
T Consensus         1 M~I~~iSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~tGDl~~~~---~~~~y~~~~~~l~~l~~p~~~v   77 (274)
T 3d03_A            1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCG---RPEEYQVARQILGSLNYPLYLI   77 (274)
T ss_dssp             CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSC---CHHHHHHHHHHHTTCSSCEEEE
T ss_pred             CEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC---CHHHHHHHHHHHHHHCCCEEEE
T ss_conf             9899991676798873101677899999999999983289999999887578899---8899999999998728878996


Q ss_pred             ECHHHHCCCCHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEE--HHHCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf             34265302220475421893897500798887540799984899289999960--0005883325989999999863413
Q gi|254780659|r   65 TGNHVWDKREALVFSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIM--GRVFMNPLLDDPFRTADKILATCPL  142 (274)
Q Consensus        65 ~GNH~wd~kei~~~i~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~--Gr~fM~~~~d~PF~~~d~~l~~~~~  142 (274)
                      .|||=+.. ...+++....     .+++....+.-+ .+.. .+.++..++-.  |+.... ..+.-..-+++.|++.  
T Consensus        78 ~GNHD~~~-~~~~~~~~~~-----~~~~~~~~~~~~-~~~~-~~~~~i~ldt~~~~~~~~~-l~~~~l~wL~~~L~~~--  146 (274)
T 3d03_A           78 PGNHDDKA-LFLEYLQPLC-----PQLGSDANNMRC-AVDD-FATRLLFIDSSRAGTSKGW-LTDETISWLEAQLFEG--  146 (274)
T ss_dssp             CCTTSCHH-HHHHHHGGGS-----GGGCSCGGGCCE-EECS-SSSEEEECCCCCTTCSSBC-CCHHHHHHHHHHHHHH--
T ss_pred             CCCCCHHH-HHHHHHHHHC-----CCCCCCCCCEEE-EEEC-CCEEEEECCCCCCCCCCCC-CCHHHHHHHHHHHHHC--
T ss_conf             78863467-8898765430-----123567786269-9954-8758984257767887640-1599999999998751--


Q ss_pred             CCCCCEEEEECCC-----CCHHHH------HHHHHHHC--CCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCC
Q ss_conf             6899889996257-----622899------99997608--9577998069762465456403672898405601
Q gi|254780659|r  143 KEQADVIVFDFHA-----ETTSEK------QCFAHFVD--SRASLVVGTHTHIPTADAQILDGGTGYITDLGMC  203 (274)
Q Consensus       143 ~~~~~~i~VDfHa-----EaTSEK------~A~g~~lD--GrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMt  203 (274)
                       .+.+.+++=.|.     ...+++      .+|.-.+.  ..|.+|+-=|+|.+..  ... +|+.|+|--|.|
T Consensus       147 -~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~l~~~l~~~~~V~~vl~GH~H~~~~--~~~-~gi~~~~~pst~  216 (274)
T 3d03_A          147 -GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTM--TQY-RQALISTLPGTV  216 (274)
T ss_dssp             -TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEE--EEE-TTEEEEECCCSS
T ss_pred             -CCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHH--EEE-CCEEEEECCCCH
T ss_conf             -0663499994387467886545424668999999998379932999885480350--699-999999848415


No 23 
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=90.24  E-value=0.8  Score=24.80  Aligned_cols=130  Identities=17%  Similarity=0.246  Sum_probs=75.2

Q ss_pred             CEEEEEEECCCHHHH----HHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEE-EECHHHHCCCCH
Q ss_conf             926999720276889----999998089888609989999170047886789999999983799899-934265302220
Q gi|254780659|r    1 MRLLFLGDIVGKTGR----SIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVI-TTGNHVWDKREA   75 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr----~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDvi-T~GNH~wd~kei   75 (274)
                      ||||.|+|+=|..-.    +.+.+.+      -++|.||-=|.-.      +++..+.|.+.+..++ -.|||=  ..++
T Consensus        23 ~rIliiSDtH~~~~~~~l~~~i~~~~------~~~D~iih~GD~~------~~~~l~~l~~~~~~v~~V~GN~D--~~~~   88 (178)
T 2kkn_A           23 KRFLLISDSHVPVRMASLPDEILNSL------KEYDGVIGLGDYV------DLDTVILLEKFSKEFYGVHGNMD--YPDV   88 (178)
T ss_dssp             EEEEEECCCCBTTTTCCCCHHHHHGG------GGCSEEEESSCBS------CHHHHHHHHHHTSSEEECCCSSS--CGGG
T ss_pred             EEEEEECCCCCCCCCHHHHHHHHHHH------CCCCEEEECCCCC------CHHHHHHHHHCCCCEEEEECCCC--CHHH
T ss_conf             29999967898864102569999874------4789999999986------67578998730798799989978--6788


Q ss_pred             HHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCC
Q ss_conf             47542189389750079888754079998489928999996000058833259899999998634136899889996257
Q gi|254780659|r   76 LVFSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHA  155 (274)
Q Consensus        76 ~~~i~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHa  155 (274)
                      ...            +|..      .+++. +|.+|+++.  |       ..-|....+.+++.                
T Consensus        89 ~~~------------lp~~------~~~~i-~g~~i~l~H--G-------~~~~~~~~~~~~~~----------------  124 (178)
T 2kkn_A           89 KEH------------LPFS------KVLLV-EGVTIGMCH--G-------WGAPWDLKDRLLKV----------------  124 (178)
T ss_dssp             GGT------------SCSC------EEEEE-TTEEEEECC--S-------CCCHHHHHHHHHHH----------------
T ss_pred             HHH------------CCCE------EEEEE-CCEEEEEEC--C-------CCCCCCHHHHHHHH----------------
T ss_conf             851------------9824------79998-886999983--8-------88875136788875----------------


Q ss_pred             CCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCC
Q ss_conf             6228999999760895779980697624654564036728984056013
Q gi|254780659|r  156 ETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCG  204 (274)
Q Consensus       156 EaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG  204 (274)
                                  ....+..++==|||+|....   .+|+- +-.-|.+|
T Consensus       125 ------------~~~~~divi~GHTH~~~~~~---~~~~~-iiNPGS~~  157 (178)
T 2kkn_A          125 ------------FNEKPQVILFGHTHEPEDTV---KAGVR-FLNPGSLA  157 (178)
T ss_dssp             ------------SSSCCSEEECCSCSSCCEEE---ETTEE-EECCCCTT
T ss_pred             ------------HHCCCCEEEECCCCCCEEEE---ECCEE-EEECCCCC
T ss_conf             ------------21389889968856521899---89999-99798999


No 24 
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate esterase; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=90.22  E-value=0.26  Score=27.93  Aligned_cols=130  Identities=17%  Similarity=0.184  Sum_probs=64.5

Q ss_pred             HHHHHHHHHHHCCCCEE-EECCEECCC-CCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHH--------HHH------
Q ss_conf             99980898886099899-991700478-86789999999983799899934265302220475--------421------
Q gi|254780659|r   18 VYEMLPRLIRDFQLDFV-IANGENSAG-GFGITEKIFCEMMETGIDVITTGNHVWDKREALVF--------SQR------   81 (274)
Q Consensus        18 v~~~Lp~l~~~~~~Dfv-IaNgENaa~-G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~--------i~~------   81 (274)
                      ..+.|+-|++ +++-.+ -++|++... ...-.++..+++.+.|.   ..|||+|.......+        +.+      
T Consensus        56 t~~il~~L~~-~~ikATFFv~G~~~~~~~~~~~p~~~k~~~~~Gh---eIgnHt~~H~~l~~ls~~~~~~ei~~~~~~l~  131 (254)
T 2iw0_A           56 TPQLLDILKQ-NDVRATFFVNGNNWANIEAGSNPDTIRRMRADGH---LVGSHTYAHPDLNTLSSADRISQMRQLEEATR  131 (254)
T ss_dssp             HHHHHHHHHH-HTCCCEEEECSBSSSBTTSTTHHHHHHHHHHTTC---EEEECCSSCCCGGGSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH-CCCCEEEEEECCCCCCCHHHHCHHHHHHHHHCCC---EEEECCCCCCCHHHCCHHHHHHHHHHHHHHHH
T ss_conf             9999999997-7993899996876564335569999999997798---88850677887433065888899999999988


Q ss_pred             -----CCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf             -----8938975007988875407999848992899999600005883325989999999863413689988999625
Q gi|254780659|r   82 -----HCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFH  154 (274)
Q Consensus        82 -----~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfH  154 (274)
                           .++..||   |-+.-.....-.-...|.++.--|+-..-+..+..+.+..+++++.+.+......+-.+|-+|
T Consensus       132 ~~~G~~p~~fR~---PyG~~~~~~~~~l~~~G~~~v~w~~dt~Dw~~~~~~~~~~~~~~i~~~~~~~~~~~g~IvL~H  206 (254)
T 2iw0_A          132 RIDGFAPKYMRA---PYLSCDAGCQGDLGGLGYHIIDTNLDTKDYENNKPETTHLSAEKFNNELSADVGANSYIVLSH  206 (254)
T ss_dssp             HHHSCEESEECC---GGGCCCHHHHHHHHHTTCEEECCSEECCTTTSCSTTTHHHHHHHHHHHSCSCGGGCCEEEEEC
T ss_pred             HHHCCCCCEECC---CCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEC
T ss_conf             861977511318---978769899999998699899555144212578986058999999999861348999799935


No 25 
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=89.55  E-value=1.2  Score=23.72  Aligned_cols=194  Identities=16%  Similarity=0.145  Sum_probs=101.5

Q ss_pred             EEEEEEECCCHHHHHHHHHHHHH-HHHHCCCCEEEECCEECCC-CCCCC----HH----HHHHHHHCCCC-EEEECHHHH
Q ss_conf             26999720276889999998089-8886099899991700478-86789----99----99999837998-999342653
Q gi|254780659|r    2 RLLFLGDIVGKTGRSIVYEMLPR-LIRDFQLDFVIANGENSAG-GFGIT----EK----IFCEMMETGID-VITTGNHVW   70 (274)
Q Consensus         2 kiLfiGDIvG~~Gr~~v~~~Lp~-l~~~~~~DfvIaNgENaa~-G~Git----~~----~~~~l~~~GvD-viT~GNH~w   70 (274)
                      +++++||. |......  ..+.. .....++|||+-.|.++-. |..-.    ..    ..+.+ ...+- ..+.|||=.
T Consensus       121 ~f~~~GD~-g~~~~~~--~~~~~~~~~~~~pdfvl~~GD~~y~d~~~~~~~~~wd~~~~~~~~~-~~~iP~~~~~GNHE~  196 (424)
T 2qfp_A          121 TFGLIGDL-GQSFDSN--TTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERS-VAYQPWIWTAGNHEI  196 (424)
T ss_dssp             EEEEECSC-TTBHHHH--HHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHH-HTTSCEEECCCHHHH
T ss_pred             EEEEECCC-CCCCCHH--HHHHHHHHCCCCCCEEEEECCEEECCCCCCCCHHHHHHHHHHHHHH-HHCCCEEECCCCCCC
T ss_conf             46556368-8776447--7898898655687659980437650555663036888999888788-722965870676532


Q ss_pred             CC------CCHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf             02------220475421893897500798887540799984899289999960000588332598999999986341368
Q gi|254780659|r   71 DK------REALVFSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKE  144 (274)
Q Consensus        71 d~------kei~~~i~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~  144 (274)
                      +.      .+-+...  ..+.-.|.|.+... ...|..|+. ++..+.++|  ....... -+.=+.-+++-|+... +.
T Consensus       197 ~~~~~~~~~~~~~~~--~~~f~~p~~~~~~~-~~~yYsfd~-G~v~fi~ld--s~~~~~~-~~~Q~~WL~~dL~~~~-r~  268 (424)
T 2qfp_A          197 EFAPEINETEPFKPF--SYRYHVPYEASQST-SPFWYSIKR-ASAHIIVLS--SYSAYGR-GTPQYTWLKKELRKVK-RS  268 (424)
T ss_dssp             CCBGGGTBCSTTHHH--HHHCCCCGGGGTCS-STTSEEEEE-TTEEEEECC--TTSCCST-TSHHHHHHHHHHHHCC-TT
T ss_pred             CCCCCCCCCCCCEEE--ECCCCCCCCCCCCC-CCCEEEEEE-CCEEEEECC--CCCCCCC-CCHHHHHHHHHHHHHH-CC
T ss_conf             257655667464044--21135776666788-875699987-888899614--7446775-4599999999987531-25


Q ss_pred             CCCEEEEECCCCC---------HHHH--HH-HHHHHCCCEEEEEECCCCCCC-----CHHH-----------HCCCCEEE
Q ss_conf             9988999625762---------2899--99-997608957799806976246-----5456-----------40367289
Q gi|254780659|r  145 QADVIVFDFHAET---------TSEK--QC-FAHFVDSRASLVVGTHTHIPT-----ADAQ-----------ILDGGTGY  196 (274)
Q Consensus       145 ~~~~i~VDfHaEa---------TSEK--~A-~g~~lDGrVsaVvGTHTHV~T-----aD~r-----------ILp~GTay  196 (274)
                      .++.+||=+|-=.         .++.  .+ ...+..-+|.+|+--|.|.=.     .+.+           -=|+||-|
T Consensus       269 ~~~w~iv~~H~P~ys~~~~~~~~~~~~r~~~~~lf~ky~Vdlvl~GH~H~Y~Rt~pi~~~~~~~~~~~~~~~~~~~g~vy  348 (424)
T 2qfp_A          269 ETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVY  348 (424)
T ss_dssp             TCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEE
T ss_pred             CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf             79869999688865458788766678999999999971975999698567110001227730124785443469998799


Q ss_pred             EECCCCCCCHHH
Q ss_conf             840560137121
Q gi|254780659|r  197 ITDLGMCGDYNS  208 (274)
Q Consensus       197 iTDvGMtG~~~S  208 (274)
                      |+ +|.-|.+.+
T Consensus       349 iv-~G~gG~~~~  359 (424)
T 2qfp_A          349 IT-IGDAGNYGV  359 (424)
T ss_dssp             EE-ECCSCTTSC
T ss_pred             EE-ECCCCCCCC
T ss_conf             99-856768654


No 26 
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=88.97  E-value=0.65  Score=25.35  Aligned_cols=67  Identities=22%  Similarity=0.250  Sum_probs=52.2

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEE-EECHHHH
Q ss_conf             926999720276889999998089888609989999170047886789999999983799899-9342653
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVI-TTGNHVW   70 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDvi-T~GNH~w   70 (274)
                      |++.+||||=|..  +.+++.|.++.-..+-|-+|.-|.-...|-. +.++.+.+++.+-.++ .+|||=.
T Consensus         1 M~~yvIGDIHG~~--~~l~~lL~~i~~~~~~D~Lv~lGD~iDRGpd-s~~vl~~~~~l~~~~~~v~GNHE~   68 (280)
T 2dfj_A            1 MATYLIGDVHGCY--DELIALLHKVEFTPGKDTLWLTGDLVARGPG-SLDVLRYVKSLGDSVRLVLGNHDL   68 (280)
T ss_dssp             -CEEEECCCCSCH--HHHHHHHHHTTCCTTTCEEEECSCCSSSSSC-HHHHHHHHHHTGGGEEECCCHHHH
T ss_pred             CCEEEEEECCCCH--HHHHHHHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHHCCCCCCCCCCCHHH
T ss_conf             9889998156899--9999999963999888889992645269979-899999999704464203553467


No 27 
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, structural genomics, center for structural genomics of infectious diseases; 2.05A {Francisella tularensis subsp}
Probab=88.71  E-value=0.59  Score=25.65  Aligned_cols=59  Identities=17%  Similarity=0.169  Sum_probs=41.1

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHH---HCCCEEEEEECCCCCCCCHHHHCCC
Q ss_conf             259899999998634136899889996257622899999976---0895779980697624654564036
Q gi|254780659|r  126 LDDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCFAHF---VDSRASLVVGTHTHIPTADAQILDG  192 (274)
Q Consensus       126 ~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A~g~~---lDGrVsaVvGTHTHV~TaD~rILp~  192 (274)
                      .++|...++.+.+.     .++.|.  ||.|++..-..+-.+   ..-++..++.-.|.+.+-. .+|+.
T Consensus        95 v~~P~~~i~~~~~~-----g~d~I~--~H~E~~~~~~~~i~~ik~~g~k~Glalnp~T~i~~l~-~~l~~  156 (246)
T 3inp_A           95 VKPVDALIESFAKA-----GATSIV--FHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLK-YVESN  156 (246)
T ss_dssp             CSSCHHHHHHHHHH-----TCSEEE--ECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGT-TTGGG
T ss_pred             CCCHHHHHHHHHHC-----CCCEEE--EECCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHH-HHHHH
T ss_conf             07999999999867-----997999--8420210899999999981981799963777899998-87640


No 28 
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, hydrolase; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=87.49  E-value=1.6  Score=22.85  Aligned_cols=176  Identities=15%  Similarity=0.215  Sum_probs=87.0

Q ss_pred             CEEEEEEECC-CH---------HHHHHHHHHHHHHHHH-CCCCEEEECCEECCCCCCCCHHHHHH---HH-----HCCCC
Q ss_conf             9269997202-76---------8899999980898886-09989999170047886789999999---98-----37998
Q gi|254780659|r    1 MRLLFLGDIV-GK---------TGRSIVYEMLPRLIRD-FQLDFVIANGENSAGGFGITEKIFCE---MM-----ETGID   61 (274)
Q Consensus         1 MkiLfiGDIv-G~---------~Gr~~v~~~Lp~l~~~-~~~DfvIaNgENaa~G~Git~~~~~~---l~-----~~GvD   61 (274)
                      |+|+-|-|+= +.         .-+..+++.|..+.+. .++|+||..|.=+-.|.   ++.|++   ++     ..++.
T Consensus        26 ~~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~pD~vvitGDl~~~g~---~~~y~~~~~~l~~~~~~~~~p  102 (330)
T 3ib7_A           26 YVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE---PAAYRKLRGLVEPFAAQLGAE  102 (330)
T ss_dssp             EEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCC---HHHHHHHHHHHHHHHHHHTCE
T ss_pred             EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC---HHHHHHHHHHHHHHHHHCCCC
T ss_conf             89999788870898763125749999999999999822989999998987789999---999999999999987524997


Q ss_pred             E-EEECHHHHCCCC-HHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCC---CCCCHHHHHHHH
Q ss_conf             9-993426530222-04754218938975007988875407999848992899999600005883---325989999999
Q gi|254780659|r   62 V-ITTGNHVWDKRE-ALVFSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNP---LLDDPFRTADKI  136 (274)
Q Consensus        62 v-iT~GNH~wd~ke-i~~~i~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~---~~d~PF~~~d~~  136 (274)
                      + +..|||=  .+. ...++....        +. . +.-...+.. ++..+.+++-.  +....   ..+.-+.-+++.
T Consensus       103 v~~v~GNHD--~~~~~~~~~~~~~--------~~-~-~~~~~~~~~-~~~~~~~ldt~--~~~~~~G~~~~~ql~wL~~~  167 (330)
T 3ib7_A          103 LVWVMGNHD--DRAELRKFLLDEA--------PS-M-APLDRVCMI-DGLRIIVLDTS--VPGHHHGEIRASQLGWLAEE  167 (330)
T ss_dssp             EEECCCTTS--CHHHHHHHHHCCC--------CC-C-SCCCEEEEE-TTEEEEECCCC--CTTCCSBCCCHHHHHHHHHH
T ss_pred             EEEECCCCC--CHHHHHHHHCCCC--------CC-C-CCCEEEEEE-CCCEEEECCCC--CCCCCCCCCCHHHHHHHHHH
T ss_conf             799578776--4455544310136--------66-6-763047870-78326643666--67876885599999999998


Q ss_pred             HHHCCCCCCCCEEEEECCCC---CH---------HHHHHHHHH-HCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCC
Q ss_conf             86341368998899962576---22---------899999976-0895779980697624654564036728984056
Q gi|254780659|r  137 LATCPLKEQADVIVFDFHAE---TT---------SEKQCFAHF-VDSRASLVVGTHTHIPTADAQILDGGTGYITDLG  201 (274)
Q Consensus       137 l~~~~~~~~~~~i~VDfHaE---aT---------SEK~A~g~~-lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvG  201 (274)
                      |++.   .+.. .+|=+|--   ..         ....++.-. -.-+|.+|+-=|+|-+..-.  . +|+-|++=-+
T Consensus       168 L~~~---~~~~-~iv~~HHpp~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~~~~~~--~-~Gi~~~~~ps  238 (330)
T 3ib7_A          168 LATP---APDG-TILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT--F-VGIPVSVASA  238 (330)
T ss_dssp             TTSC---CTTC-EEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEE--E-TTEEEEECCC
T ss_pred             HHHC---CCCC-EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCEEE--E-CCEEEEEECC
T ss_conf             8647---7887-6999816985677753344334447999999974698199977788049379--9-9999999696


No 29 
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol- phosphate, lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=85.72  E-value=1.9  Score=22.35  Aligned_cols=48  Identities=19%  Similarity=0.213  Sum_probs=30.3

Q ss_pred             HHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf             9998089888609989999170047886789999999983799899934
Q gi|254780659|r   18 VYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTG   66 (274)
Q Consensus        18 v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~G   66 (274)
                      +.+.+.++|++-+.-|+. ---.---.+-.+.+..+.|-++|+|+|-.|
T Consensus         5 i~~~f~~~k~~~~~ali~-yi~aG~P~~~~~~~~l~~l~~~G~D~iEiG   52 (262)
T 1rd5_A            5 VSDTMAALMAKGKTAFIP-YITAGDPDLATTAEALRLLDGCGADVIELG   52 (262)
T ss_dssp             HHHHHHHHHHTTCCEEEE-EEETTSSCHHHHHHHHHHHHHTTCSSEEEE
T ss_pred             HHHHHHHHHHCCCCEEEE-EEECCCCCHHHHHHHHHHHHHCCCCEEEEC
T ss_conf             999999999759967999-972778997899999999997599999967


No 30 
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=85.60  E-value=1.3  Score=23.51  Aligned_cols=64  Identities=20%  Similarity=0.225  Sum_probs=46.3

Q ss_pred             EEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHH
Q ss_conf             26999720276889999998089888609989999170047886789999999983799899934265
Q gi|254780659|r    2 RLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHV   69 (274)
Q Consensus         2 kiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~   69 (274)
                      ||++||||=|.  ..++++.|..+......|-+|..|.=...|  -...-.-+++..+--..-.|||=
T Consensus        14 ri~vIgDIHG~--~~~L~~lL~~~~~~~~~d~lv~lGD~vDrG--p~s~~vl~~l~~~~~~~i~GNHE   77 (221)
T 1g5b_A           14 NIWVVGDLHGC--YTNLMNKLDTIGFDNKKDLLISVGDLVDRG--AENVECLELITFPWFRAVRGNHE   77 (221)
T ss_dssp             CEEEECCCTTC--HHHHHHHHHHHTCCTTTCEEEECSCCSSSS--SCHHHHHGGGGSTTEEECCCHHH
T ss_pred             EEEEEECCCCC--HHHHHHHHHHCCCCCCCCEEEEECCCCCCC--CCCHHHHHHHHCCCCCCCCCCHH
T ss_conf             79999400069--999999999748998777899917761568--87489999764434454678189


No 31 
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=84.99  E-value=2.1  Score=22.03  Aligned_cols=64  Identities=13%  Similarity=0.171  Sum_probs=43.7

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHH----CCCCEEEECCEECCCCCCCCH-HHHHHHHHC----CCCEEEECHHH
Q ss_conf             9269997202768899999980898886----099899991700478867899-999999837----99899934265
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRD----FQLDFVIANGENSAGGFGITE-KIFCEMMET----GIDVITTGNHV   69 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~----~~~DfvIaNgENaa~G~Git~-~~~~~l~~~----GvDviT~GNH~   69 (274)
                      ++|..||||=|..  .++++.|..+.+.    .++|.+|..|.-..  +|-.+ +..+.|.+.    .+ ..-.|||=
T Consensus         2 ~~I~visDiHg~~--~~l~~~l~~i~~~~~~~~~~d~ii~lGDlvd--~Gp~~~e~~~~l~~l~~~~~~-~~i~GNHD   74 (252)
T 1nnw_A            2 VYVAVLANIAGNL--PALTAALSRIEEMREEGYEIEKYYILGNIVG--LFPYPKEVIEVIKDLTKKENV-KIIRGKYD   74 (252)
T ss_dssp             CEEEEEECCTTCH--HHHHHHHHHHHHHHHTTCCEEEEEEESCSSS--SSSCHHHHHHHHHHHHHHSCE-EEECCHHH
T ss_pred             CEEEEEECCCCCH--HHHHHHHHHHHHHHCCCCCCCEEEEECCCCC--CCCCHHHHHHHHHHHHHCCCE-EEECCCCH
T ss_conf             7899997303598--9999999999974325898778999378289--988869999999976551782-89638856


No 32 
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=84.72  E-value=1  Score=24.14  Aligned_cols=59  Identities=17%  Similarity=0.241  Sum_probs=37.0

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH-HH-HHH--HHHCCCEEEEEECCCCCCCCHHHHCCC
Q ss_conf             25989999999863413689988999625762289-99-999--760895779980697624654564036
Q gi|254780659|r  126 LDDPFRTADKILATCPLKEQADVIVFDFHAETTSE-KQ-CFA--HFVDSRASLVVGTHTHIPTADAQILDG  192 (274)
Q Consensus       126 ~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSE-K~-A~g--~~lDGrVsaVvGTHTHV~TaD~rILp~  192 (274)
                      .++|...++.+.+.     .++.+  =||.||+.+ .. .+.  .-..=++..++--.|-+..-+ .+|+.
T Consensus        66 v~~P~~~i~~~~~~-----ga~~i--~~H~Ea~~~~~~~~i~~i~~~g~~~Gialnp~T~~~~i~-~~l~~  128 (231)
T 3ctl_A           66 VTRPQDYIAQLARA-----GADFI--TLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMK-YYIHK  128 (231)
T ss_dssp             SSCGGGTHHHHHHH-----TCSEE--EECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCCGGGGT-TTGGG
T ss_pred             ECCHHHHHHHHHHC-----CCCEE--EEEHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHH-HHHCC
T ss_conf             66888999999866-----99879--963254303599999999977987999956999705655-23133


No 33 
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=84.18  E-value=0.2  Score=28.63  Aligned_cols=53  Identities=13%  Similarity=0.210  Sum_probs=31.2

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH--HHH--HHHHHCCCEEEEEECCCCCCCC
Q ss_conf             25989999999863413689988999625762289--999--9976089577998069762465
Q gi|254780659|r  126 LDDPFRTADKILATCPLKEQADVIVFDFHAETTSE--KQC--FAHFVDSRASLVVGTHTHIPTA  185 (274)
Q Consensus       126 ~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSE--K~A--~g~~lDGrVsaVvGTHTHV~Ta  185 (274)
                      ..+|-..++++.+.     .++.|.  ||.|+++.  +..  ...-..-++..++.-.|.+..-
T Consensus        73 v~~p~~~i~~~~~~-----g~~~i~--~H~E~~~~~~~~~i~~i~~~g~k~Gial~p~t~~~~~  129 (228)
T 1h1y_A           73 VTNPSDYVEPLAKA-----GASGFT--FHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTPVEEV  129 (228)
T ss_dssp             SSCGGGGHHHHHHH-----TCSEEE--EEGGGCTTTHHHHHHHHHHTTCEEEEEECTTSCGGGG
T ss_pred             ECCHHHHHHHHHHC-----CCCEEE--EECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHH
T ss_conf             71657549999856-----997799--6050023589999999997497311584489988999


No 34 
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose phosphate pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=83.41  E-value=0.14  Score=29.77  Aligned_cols=58  Identities=19%  Similarity=0.387  Sum_probs=38.1

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH---HHHHH--HHHCCCEEEEEECCCCCCCCHHHHCC
Q ss_conf             25989999999863413689988999625762289---99999--76089577998069762465456403
Q gi|254780659|r  126 LDDPFRTADKILATCPLKEQADVIVFDFHAETTSE---KQCFA--HFVDSRASLVVGTHTHIPTADAQILD  191 (274)
Q Consensus       126 ~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSE---K~A~g--~~lDGrVsaVvGTHTHV~TaD~rILp  191 (274)
                      ..+|...++.+.+.     .++.|.  ||.|+++.   +..+.  .-..-++..++--.|.+..-.. +|+
T Consensus        77 v~~P~~~i~~~~~~-----g~d~i~--~H~E~~~~~~~~~~i~~ik~~g~k~Glal~p~T~~~~i~~-~l~  139 (230)
T 1rpx_A           77 IVEPDQRVPDFIKA-----GADIVS--VHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEY-VLD  139 (230)
T ss_dssp             SSSHHHHHHHHHHT-----TCSEEE--EECSTTTCSCHHHHHHHHHHTTSEEEEEECTTCCGGGGTT-TTT
T ss_pred             EECHHHHHHHHHHH-----CCCEEE--EECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHH
T ss_conf             96578769999871-----895367--5133344226999999999879869999689999899999-986


No 35 
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=82.17  E-value=0.61  Score=25.53  Aligned_cols=58  Identities=17%  Similarity=0.300  Sum_probs=36.0

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH---HHHHHH--HHCCCEEEEEECCCCCCCCHHHHCC
Q ss_conf             25989999999863413689988999625762289---999997--6089577998069762465456403
Q gi|254780659|r  126 LDDPFRTADKILATCPLKEQADVIVFDFHAETTSE---KQCFAH--FVDSRASLVVGTHTHIPTADAQILD  191 (274)
Q Consensus       126 ~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSE---K~A~g~--~lDGrVsaVvGTHTHV~TaD~rILp  191 (274)
                      .++|...++.+.+.     .++.+.  ||.|+++.   +..+.+  -..=++..++--.|.+..- +.+|+
T Consensus        71 v~~P~~~i~~~~~~-----g~~~i~--~H~E~~~~~~~~~~i~~ik~~g~k~Glal~p~T~i~~i-~~~l~  133 (230)
T 1tqj_A           71 IVEPEKYVEDFAKA-----GADIIS--VHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDFL-EYVLP  133 (230)
T ss_dssp             SSSGGGTHHHHHHH-----TCSEEE--EECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCCGGGG-TTTGG
T ss_pred             EECHHHHHHHHHHC-----CCCEEE--EECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHH-HHHHC
T ss_conf             74789999999864-----897899--82454556468999999998699189997799987999-99865


No 36 
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum 3D7} SCOP: c.1.2.2
Probab=81.47  E-value=2  Score=22.24  Aligned_cols=57  Identities=11%  Similarity=0.225  Sum_probs=33.0

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHH-----HHHHCCCEEEEEECCCCCCCCHHHH
Q ss_conf             259899999998634136899889996257622899999-----9760895779980697624654564
Q gi|254780659|r  126 LDDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCF-----AHFVDSRASLVVGTHTHIPTADAQI  189 (274)
Q Consensus       126 ~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A~-----g~~lDGrVsaVvGTHTHV~TaD~rI  189 (274)
                      ..+|...++.    +   .++....+-+|+|..+.....     ..-..-++..++-..|.+......+
T Consensus        73 v~~p~~~i~~----~---~~~~~~~i~~~~~~~~~~~~~~~i~~i~~~g~~~Glal~p~t~~~~~~~~l  134 (227)
T 1tqx_A           73 VEYPEKYVPL----L---KTSNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPIL  134 (227)
T ss_dssp             SSCGGGGGGG----C---TTSSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSCGGGGHHHH
T ss_pred             ECCHHHHCHH----H---HCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH
T ss_conf             1674651546----6---425750589831145213099999999864974733148999989987554


No 37 
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 1w24_A 2r17_A
Probab=77.05  E-value=0.57  Score=25.76  Aligned_cols=140  Identities=18%  Similarity=0.222  Sum_probs=74.7

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEE-EECHHHHCCCCHHHHH
Q ss_conf             926999720276889999998089888609989999170047886789999999983799899-9342653022204754
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVI-TTGNHVWDKREALVFS   79 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDvi-T~GNH~wd~kei~~~i   79 (274)
                      ||||.|.|+=+..=...+...+-++.++.++|.||.-|.-.      +++.++.|.+...++. -.|||-++.       
T Consensus        11 MkI~vISDtH~~~~~~~l~~~~~~~~~~~~vD~iih~GDi~------~~~~~~~l~~~~~~v~~V~GN~D~~~-------   77 (192)
T 1z2w_A           11 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLC------TKESYDYLKTLAGDVHIVRGDFDENL-------   77 (192)
T ss_dssp             CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCB------SHHHHHHHHHHCSEEEECCCTTCCCT-------
T ss_pred             EEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCC------CHHHHHHHHHCCCCEEEEECCCCCCC-------
T ss_conf             29999902788986201679999985316999999998998------77889988741873799916875222-------


Q ss_pred             HHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHH
Q ss_conf             21893897500798887540799984899289999960000588332598999999986341368998899962576228
Q gi|254780659|r   80 QRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTS  159 (274)
Q Consensus        80 ~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTS  159 (274)
                                ++|.      ..+++. .|.++.++.-  .-+. |. ..+ ..+.+.+++    .+              
T Consensus        78 ----------~l~~------~~~~~~-~g~~i~~~Hg--~~~~-~~-~~~-~~l~~~~~~----~~--------------  117 (192)
T 1z2w_A           78 ----------NYPE------QKVVTV-GQFKIGLIHG--HQVI-PW-GDM-ASLALLQRQ----FD--------------  117 (192)
T ss_dssp             ----------TSCS------EEEEEE-TTEEEEEECS--CCCC-BT-TCH-HHHHHHHHH----HS--------------
T ss_pred             ----------CCCC------EEEEEE-CCCEEEEEEC--CCCC-CC-CCH-HHHHHHHHH----CC--------------
T ss_conf             ----------6772------899997-8979999908--9767-66-588-999999873----58--------------


Q ss_pred             HHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCC-CCCHHHC
Q ss_conf             9999997608957799806976246545640367289840560-1371210
Q gi|254780659|r  160 EKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGM-CGDYNSS  209 (274)
Q Consensus       160 EK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGM-tG~~~SV  209 (274)
                                  +..|+==|||+|....   -+|+-+ ---|- ++|+++.
T Consensus       118 ------------~divi~GHTH~p~~~~---~~~~~i-iNPGS~~~pr~~~  152 (192)
T 1z2w_A          118 ------------VDILISGHTHKFEAFE---HENKFY-INPGSATGAYNAL  152 (192)
T ss_dssp             ------------SSEEECCSSCCCEEEE---ETTEEE-EECCCTTCCCCSS
T ss_pred             ------------CCEEEECCCCCCEEEE---ECCEEE-EECCCCCCCCCCC
T ss_conf             ------------9989978878503899---999999-9799888888898


No 38 
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=75.10  E-value=4.5  Score=19.93  Aligned_cols=87  Identities=16%  Similarity=0.266  Sum_probs=51.9

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHC-------------------------CCCEEEECCEECCCCCCCCHHHHHHH
Q ss_conf             92699972027688999999808988860-------------------------99899991700478867899999999
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDF-------------------------QLDFVIANGENSAGGFGITEKIFCEM   55 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~-------------------------~~DfvIaNgENaa~G~Git~~~~~~l   55 (274)
                      |||..||  +|+-|+...+. |..  ..+                         .+|+||.-+     +-....+++.+.
T Consensus         1 MkVgIIG--~G~iG~~v~~~-l~~--~~~el~~v~d~~~~~~~~~~~~de~l~~~~DvVie~a-----~~~a~~e~a~~~   70 (236)
T 2dc1_A            1 MLVGLIG--YGAIGKFLAEW-LER--NGFEIAAILDVRGEHEKMVRGIDEFLQREMDVAVEAA-----SQQAVKDYAEKI   70 (236)
T ss_dssp             CEEEEEC--CSHHHHHHHHH-HHH--TTCEEEEEECSSCCCTTEESSHHHHTTSCCSEEEECS-----CHHHHHHHHHHH
T ss_pred             CEEEEEC--CCHHHHHHHHH-HHH--CCCEEEEEEECCCCCCCCCCCHHHHHCCCCCEEEEEC-----CCCCCHHHHHHH
T ss_conf             9799995--88899999999-971--9988999996785022444899999438887899906-----974047999999


Q ss_pred             HHCCCCEEEECHHHHCCCCHH----HHHH-HCCCEEEECCCCCCCCC
Q ss_conf             837998999342653022204----7542-18938975007988875
Q gi|254780659|r   56 METGIDVITTGNHVWDKREAL----VFSQ-RHCKFLRPANYPPNTPG   97 (274)
Q Consensus        56 ~~~GvDviT~GNH~wd~kei~----~~i~-~~~~ilRP~N~p~~~PG   97 (274)
                      ++.|.|++++=-=....++..    +.-+ ...+++=|.+.-.+.+.
T Consensus        71 L~~G~~vvv~S~galad~~~~~~L~~~A~~~g~~l~i~sGaigGld~  117 (236)
T 2dc1_A           71 LKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGGLDA  117 (236)
T ss_dssp             HHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSCHHH
T ss_pred             HHCCCCEEEEECHHHCCCHHHHHHHHHHHHCCCCEEECCCHHCCHHH
T ss_conf             97399799962216317349999999998658837844200114489


No 39 
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=69.12  E-value=6.1  Score=19.05  Aligned_cols=58  Identities=22%  Similarity=0.406  Sum_probs=35.6

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHH----------------HHHHH------------------CCCCEEEECCEECCCCCC
Q ss_conf             92699972027688999999808----------------98886------------------099899991700478867
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLP----------------RLIRD------------------FQLDFVIANGENSAGGFG   46 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp----------------~l~~~------------------~~~DfvIaNgENaa~G~G   46 (274)
                      |||+.+|=  |..|+.+.+. |.                ++++.                  -+.|+||    |++ |..
T Consensus        17 mki~vlG~--G~vG~~~~~~-L~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~d~Vi----~~~-~~~   88 (365)
T 2z2v_A           17 MKVLILGA--GNIGRAIAWD-LKDEFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVI----GAL-PGF   88 (365)
T ss_dssp             CEEEEECC--SHHHHHHHHH-HTTTSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEE----ECC-CHH
T ss_pred             CEEEEECC--CHHHHHHHHH-HHCCCCEEEEECCHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCEEE----ECC-CCC
T ss_conf             57999997--5999999999-864798699987788899877427736873499999999973589999----967-851


Q ss_pred             CCHHHHHHHHHCCCCEEEEC
Q ss_conf             89999999983799899934
Q gi|254780659|r   47 ITEKIFCEMMETGIDVITTG   66 (274)
Q Consensus        47 it~~~~~~l~~~GvDviT~G   66 (274)
                      ....+++...++|+++++..
T Consensus        89 ~~~~v~~~~~~~g~~yiD~~  108 (365)
T 2z2v_A           89 LGFKSIKAAIKSKVDMVDVS  108 (365)
T ss_dssp             HHHHHHHHHHHTTCCEEECC
T ss_pred             CHHHHHHHHHHCCCCCCCCC
T ss_conf             02589999875285221122


No 40 
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotide, structural genomics, NPPSFA; 2.80A {Thermus thermophilus HB8}
Probab=65.30  E-value=7.3  Score=18.57  Aligned_cols=79  Identities=23%  Similarity=0.304  Sum_probs=43.8

Q ss_pred             HHHHHHHHHCCCCEEEECCEE-CCCC------------CCCCHHH---------HHHH-HHCCCCEEEECHHHH-CCCCH
Q ss_conf             980898886099899991700-4788------------6789999---------9999-837998999342653-02220
Q gi|254780659|r   20 EMLPRLIRDFQLDFVIANGEN-SAGG------------FGITEKI---------FCEM-METGIDVITTGNHVW-DKREA   75 (274)
Q Consensus        20 ~~Lp~l~~~~~~DfvIaNgEN-aa~G------------~Git~~~---------~~~l-~~~GvDviT~GNH~w-d~kei   75 (274)
                      +.|-++-+++++|+||+..|. .+.|            +|.+++.         ++++ .++|+-  |.--..+ +..|.
T Consensus        51 ~~i~~~~~~~~idlvivGpE~pL~~gl~d~l~~~gi~v~Gp~~~~a~le~sK~~~k~~m~~~gIp--t~~~~~~~~~~ea  128 (417)
T 2ip4_A           51 EALADWALAEGIDLTLVGPEAPLVEGIADAFQARGLLLFGPTQKAAMIEGSKAFAKGLMERYGIP--TARYRVFREPLEA  128 (417)
T ss_dssp             HHHHHHHHHHTCCEEEECSSHHHHTTHHHHHHHHTCCEESCCHHHHHHHHCHHHHHHHHHHTCCC--BCCEEEESSHHHH
T ss_pred             HHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCC--CCCCEEEECHHHH
T ss_conf             99999999859999998974788878899998579976587077888776789999999981989--8885499358999


Q ss_pred             HHHHHH--CCCEEEECCCCCCCCCCCEEEE
Q ss_conf             475421--8938975007988875407999
Q gi|254780659|r   76 LVFSQR--HCKFLRPANYPPNTPGNGSGLY  103 (274)
Q Consensus        76 ~~~i~~--~~~ilRP~N~p~~~PG~G~~i~  103 (274)
                      ..++++  .|-+++|.-.   +-|+|..+.
T Consensus       129 ~~~~~~~~~P~ViKp~~~---a~gkGv~i~  155 (417)
T 2ip4_A          129 LAYLEEVGVPVVVKDSGL---AAGKGVTVA  155 (417)
T ss_dssp             HHHHHHHCSSEEEECTTS---CSSTTCEEE
T ss_pred             HHHHHHCCCCEEEECCCC---CCCCCEEEE
T ss_conf             999997699889972787---898764664


No 41 
>2w3z_A Putative deacetylase; PGDA, glcnac DE-N-acetylase, hydrolase, divale metal cation dependent, carbohydrate esterase family 4; 1.45A {Streptococcus mutans UA159}
Probab=65.09  E-value=7.2  Score=18.60  Aligned_cols=50  Identities=16%  Similarity=0.201  Sum_probs=31.3

Q ss_pred             HHHHHHHHHHCCCCEE-EECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCH
Q ss_conf             9980898886099899-99170047886789999999983799899934265302220
Q gi|254780659|r   19 YEMLPRLIRDFQLDFV-IANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREA   75 (274)
Q Consensus        19 ~~~Lp~l~~~~~~Dfv-IaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei   75 (274)
                      .+.|+-|++. ++-.+ -++|.+.+.   -.++..+++.+.|   .+.|||+|++...
T Consensus       123 ~~iL~~L~~~-~v~ATFFv~G~~i~~---~~~~~~k~~~~~G---heIgnHt~~H~~~  173 (311)
T 2w3z_A          123 PKILDVLAQQ-HVHATFFLVGCNITD---KVKPILQRQITEG---HALGIHSFSHVYS  173 (311)
T ss_dssp             HHHHHHHHHT-TCCCEEEECGGGCCG---GGHHHHHHHHHTT---CEEEECCSSCCHH
T ss_pred             HHHHHHHHHC-CCCEEEEECCCCHHH---CHHHHHHHHHHCC---CEEEEECCCCCCC
T ss_conf             9999999985-997899825743434---5699999999749---8898303514431


No 42 
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis W83}
Probab=62.60  E-value=8  Score=18.31  Aligned_cols=19  Identities=26%  Similarity=0.551  Sum_probs=14.4

Q ss_pred             CEEEEEEECCCHHHHHHHHHH
Q ss_conf             926999720276889999998
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEM   21 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~   21 (274)
                      +||..+|  .|+-|+..++..
T Consensus        10 irv~iiG--~G~mG~~~~~~l   28 (304)
T 3bio_A           10 IRAAIVG--YGNIGRYALQAL   28 (304)
T ss_dssp             EEEEEEC--CSHHHHHHHHHH
T ss_pred             CEEEEEC--CCHHHHHHHHHH
T ss_conf             4799989--869999999999


No 43 
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=61.96  E-value=8.4  Score=18.17  Aligned_cols=42  Identities=31%  Similarity=0.469  Sum_probs=22.8

Q ss_pred             HHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf             99998089888609989999170047886789999999983799899934
Q gi|254780659|r   17 IVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTG   66 (274)
Q Consensus        17 ~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~G   66 (274)
                      .+.+.+.++|+.+.++ ||+  -|.     -|++.+++|.++|+|.|--|
T Consensus       132 ~~~~~ik~~r~~~~~~-vi~--GNV-----aT~e~a~~L~~aGAD~VkVG  173 (361)
T 3khj_A          132 NIIRTLKEIKSKMNID-VIV--GNV-----VTEEATKELIENGADGIKVG  173 (361)
T ss_dssp             HHHHHHHHHHHHCCCE-EEE--EEE-----CSHHHHHHHHHTTCSEEEEC
T ss_pred             HHHHHHHHHHHCCCCC-EEE--CCC-----CCHHHHHHHHHCCCCEEEEC
T ss_conf             8999999986027988-686--553-----88899999997199889973


No 44 
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=61.57  E-value=3.9  Score=20.32  Aligned_cols=147  Identities=14%  Similarity=0.211  Sum_probs=80.0

Q ss_pred             EEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEE-EECHHHHCCCCHHHHHHH
Q ss_conf             6999720276889999998089888609989999170047886789999999983799899-934265302220475421
Q gi|254780659|r    3 LLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVI-TTGNHVWDKREALVFSQR   81 (274)
Q Consensus         3 iLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDvi-T~GNH~wd~kei~~~i~~   81 (274)
                      ||.|||+=...-...+-..+.++-+.-++|.||.-|.=.      +++.++.|.+.+.++. -.|||=....+....   
T Consensus        28 ilvIsDtHip~r~~~lp~~~~~~l~~~kvD~Iih~GDi~------~~e~l~~L~~l~~~v~~V~GN~D~~~~~~~~~---   98 (215)
T 2a22_A           28 VLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVC------SQEYVEMLKNITKNVYIVSGDLDSAIFNPDPE---   98 (215)
T ss_dssp             EEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCC------CHHHHHHHHHHCSCEEECCCTTCCSCCBCCGG---
T ss_pred             EEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCC------CHHHHHHHHHHCCCEEEEECCCCCCHHHHHHH---
T ss_conf             999916788764014549999984746889899899999------98999999964997699837867101002278---


Q ss_pred             CCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH
Q ss_conf             89389750079888754079998489928999996000058833259899999998634136899889996257622899
Q gi|254780659|r   82 HCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSEK  161 (274)
Q Consensus        82 ~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK  161 (274)
                      ..     ..+|.      ..+++. +|.++.++.  |.-+. | ..+| ..+..+..+                      
T Consensus        99 ~~-----~~lP~------~~~~~~-~g~~i~l~H--g~~~~-p-~~~~-~~l~~~~~~----------------------  139 (215)
T 2a22_A           99 SN-----GVFPE------YVVVQI-GEFKIGLMH--GNQVL-P-WDDP-GSLEQWQRR----------------------  139 (215)
T ss_dssp             GT-----BCCCS------EEEEEE-TTEEEEEEC--STTSS-S-TTCH-HHHHHHHHH----------------------
T ss_pred             HH-----HHCCC------CEEEEE-CCEEEEEEC--CCCCC-C-CCCH-HHHHHHHHC----------------------
T ss_conf             89-----76998------179999-999999977--98656-6-5357-899998750----------------------


Q ss_pred             HHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCHHH
Q ss_conf             99997608957799806976246545640367289840560137121
Q gi|254780659|r  162 QCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCGDYNS  208 (274)
Q Consensus       162 ~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG~~~S  208 (274)
                              ..+..++==|||+|....   -+|+-++--==.||++++
T Consensus       140 --------~~~dvvv~GHTH~p~~~~---~~g~l~iNPGS~~~~r~~  175 (215)
T 2a22_A          140 --------LDCDILVTGHTHKLRVFE---KNGKLFLNPGTATGAFSA  175 (215)
T ss_dssp             --------HTCSEEEECSSCCCEEEE---ETTEEEEECCCSSCCCCT
T ss_pred             --------CCCCEEEECCCCCCCEEE---ECCEEEEECCCCCCCCCC
T ss_conf             --------289989979989764799---999999948987777778


No 45 
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, structural genomics, joint center for structural genomics, JCSG; 1.91A {Haemophilus somnus 129PT}
Probab=61.41  E-value=8.6  Score=18.11  Aligned_cols=60  Identities=13%  Similarity=0.217  Sum_probs=40.5

Q ss_pred             CCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCC------------CEEEEEECCCCCCCCHHHHCCC
Q ss_conf             3259899999998634136899889996257622899999976089------------5779980697624654564036
Q gi|254780659|r  125 LLDDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCFAHFVDS------------RASLVVGTHTHIPTADAQILDG  192 (274)
Q Consensus       125 ~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A~g~~lDG------------rVsaVvGTHTHV~TaD~rILp~  192 (274)
                      ..++|...++.+.+.     .++.  |=||.||+..-...-.++..            ++..++--.|.+..-. .+|+.
T Consensus        77 Mv~~P~~~i~~~~~~-----g~d~--I~~H~E~~~~~~~~i~~i~~~~~~~~~~~~~i~~Glalnp~T~~~~i~-~~l~~  148 (237)
T 3cu2_A           77 MVRNQLEVAKAVVAN-----GANL--VTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELE-PYLDQ  148 (237)
T ss_dssp             ECSCHHHHHHHHHHT-----TCSE--EEEETTCTTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGT-TTTTT
T ss_pred             EEECCCCCHHHHHHC-----CCCE--EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHH-HHHCC
T ss_conf             996352017899757-----9968--998452456789999999876666676551314304507999899999-76455


No 46 
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=59.65  E-value=3.8  Score=20.41  Aligned_cols=89  Identities=10%  Similarity=0.157  Sum_probs=52.0

Q ss_pred             CEEEEEEECCCHHHHHHHHHHH--------------------HHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCC
Q ss_conf             9269997202768899999980--------------------89888609989999170047886789999999983799
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEML--------------------PRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGI   60 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~L--------------------p~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~Gv   60 (274)
                      |||..+|  +|+-|+..++..-                    ..+-....+|+||-=.     +--...+++.+.++.|+
T Consensus        13 mrV~iiG--~G~~G~~v~~~~~~~~v~v~~r~~~~~~~~~~~~~~~~~~~~DvVve~~-----~~~~~~~~~~~al~~g~   85 (253)
T 1j5p_A           13 MTVLIIG--MGNIGKKLVELGNFEKIYAYDRISKDIPGVVRLDEFQVPSDVSTVVECA-----SPEAVKEYSLQILKNPV   85 (253)
T ss_dssp             CEEEEEC--CSHHHHHHHHHSCCSEEEEECSSCCCCSSSEECSSCCCCTTCCEEEECS-----CHHHHHHHHHHHTTSSS
T ss_pred             CEEEEEC--CCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHCCCCCCEEEECC-----CCHHHHHHHHHHHHCCC
T ss_conf             8899998--7889999999861084799925777666757878861657998999858-----80799999999997399


Q ss_pred             CEEEECHHHHCCC----CHHHHHHH-CCCEEEECCCCCCCC
Q ss_conf             8999342653022----20475421-893897500798887
Q gi|254780659|r   61 DVITTGNHVWDKR----EALVFSQR-HCKFLRPANYPPNTP   96 (274)
Q Consensus        61 DviT~GNH~wd~k----ei~~~i~~-~~~ilRP~N~p~~~P   96 (274)
                      ++++.=-=..+..    ++.+.-++ ..+++-|.|+.-+.+
T Consensus        86 ~vv~~s~g~~~~~~~~~~l~~~a~~~~~~i~~~~~~~~G~d  126 (253)
T 1j5p_A           86 NYIIISTSAFADEVFRERFFSELKNSPARVFFPSGAIGGLD  126 (253)
T ss_dssp             EEEECCGGGGGSHHHHHHHHHHHHTCSCEEECCCTTCCCHH
T ss_pred             CEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCEEECCH
T ss_conf             79998364245731599999999972993995563152753


No 47 
>2c1i_A Peptidoglycan glcnac deacetylase; carbohydrate esterase, peptidoglycan deacetylase, metalloenzyme, D275N mutant, hydrolase; HET: MES; 1.35A {Streptococcus pneumoniae} SCOP: c.6.2.3 d.341.1.1 PDB: 2c1g_A
Probab=59.35  E-value=9.3  Score=17.88  Aligned_cols=50  Identities=22%  Similarity=0.326  Sum_probs=33.5

Q ss_pred             HHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCH
Q ss_conf             998089888609989999170047886789999999983799899934265302220
Q gi|254780659|r   19 YEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREA   75 (274)
Q Consensus        19 ~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei   75 (274)
                      .+.|+-|++..-.----++|+++..    .+...+++.+.|-   ..|||+|++..+
T Consensus       252 ~~iLdiL~k~~vkATFFv~G~~~~~----~p~~vr~i~~~GH---eIGnHt~sH~~l  301 (431)
T 2c1i_A          252 PQVLETLAKYDIKATFFVLGKNVSG----NEDLVKRIKSEGH---VVGNHSWSHPIL  301 (431)
T ss_dssp             HHHHHHHHHTTCCCEEEECGGGTTT----CHHHHHHHHHTTC---EEEECCSSCCCG
T ss_pred             HHHHHHHHHCCCCEEEEECHHHHHH----CHHHHHHHHHCCC---EEECCCCCCCCC
T ss_conf             9999999973992999973785537----9999999997799---998588887561


No 48 
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/proteomics initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus HB8} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=56.01  E-value=11  Score=17.53  Aligned_cols=152  Identities=14%  Similarity=0.132  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCC-CHHHHHHHCCCEEEECCCCCCCC
Q ss_conf             99980898886099899991700478867899999999837998999342653022-20475421893897500798887
Q gi|254780659|r   18 VYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKR-EALVFSQRHCKFLRPANYPPNTP   96 (274)
Q Consensus        18 v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~k-ei~~~i~~~~~ilRP~N~p~~~P   96 (274)
                      +.+.+.++|++++.-+|+----|-.-.+|+ .+-++++.++|||.+-.=+--|+.. ++.+...+..--+-|+=-| .+|
T Consensus        79 ~~~~~~~~r~~~~~p~vlM~Y~N~~~~~G~-~~F~~~~~~aGvdG~iipDLP~ee~~~~~~~~~~~gl~~I~lvaP-tt~  156 (271)
T 1ujp_A           79 ALELVREVRALTEKPLFLMTYLNPVLAWGP-ERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAP-TST  156 (271)
T ss_dssp             HHHHHHHHHHHCCSCEEEECCHHHHHHHCH-HHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECT-TCC
T ss_pred             HHHHHHHHHHCCCCCEEEEEECCHHHHCCH-HHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEECC-CCC
T ss_conf             999999986237975599984442441673-788899987398423247785221378999998569867999478-885


Q ss_pred             CCC-EEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEE
Q ss_conf             540-7999848992899999600005883325989999999863413689988999625762289999997608957799
Q gi|254780659|r   97 GNG-SGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCFAHFVDSRASLV  175 (274)
Q Consensus        97 G~G-~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A~g~~lDGrVsaV  175 (274)
                      -.- -.+....+|. |=++.++|.+..+..+  | ..+++.++.++...+. -+.|-| +=.|.|..++.++.||   +|
T Consensus       157 ~~Ri~~i~~~s~gF-iY~vs~~GvTG~~~~~--~-~~~~~~i~~ik~~t~~-Pv~vGF-GI~t~e~~~~~~~ADG---vI  227 (271)
T 1ujp_A          157 DARIATVVRHATGF-VYAVSVTGVTGMRERL--P-EEVKDLVRRIKARTAL-PVAVGF-GVSGKATAAQAAVADG---VV  227 (271)
T ss_dssp             HHHHHHHHTTCCSC-EEEECC---------------CCHHHHHHHHTTCCS-CEEEES-CCCSHHHHHHHTTSSE---EE
T ss_pred             HHHHHHHHHHCCCE-EEEEECCCCCCCCCCC--C-HHHHHHHHHHHCCCCC-CEEEEC-CCCCHHHHHHHCCCCE---EE
T ss_conf             78999999739870-7884036777766555--2-3589999875105689-759980-7798899987468998---99


Q ss_pred             EECCC
Q ss_conf             80697
Q gi|254780659|r  176 VGTHT  180 (274)
Q Consensus       176 vGTHT  180 (274)
                      |||+-
T Consensus       228 VGSa~  232 (271)
T 1ujp_A          228 VGSAL  232 (271)
T ss_dssp             ECHHH
T ss_pred             ECHHH
T ss_conf             85999


No 49 
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=54.96  E-value=11  Score=17.42  Aligned_cols=111  Identities=23%  Similarity=0.328  Sum_probs=69.1

Q ss_pred             HHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHH-CCCCEEEECHHHHCCCCHHHHHHHCCCEEEECCCCC
Q ss_conf             9999998089888609989999170047886789999999983-799899934265302220475421893897500798
Q gi|254780659|r   15 RSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMME-TGIDVITTGNHVWDKREALVFSQRHCKFLRPANYPP   93 (274)
Q Consensus        15 r~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~-~GvDviT~GNH~wd~kei~~~i~~~~~ilRP~N~p~   93 (274)
                      ...+.+.+-...++|++||+|+-+-|++-   -.|+-++|+++ .|+-+|--|+-.--+  ..+.+++            
T Consensus        49 ~e~~~~~~~~~~~~~~pDf~I~isPN~~~---PGP~~ARE~l~~~~iP~IvI~D~p~~K--~kd~l~~------------  111 (283)
T 1qv9_A           49 VEAAVEMALDIAEDFEPDFIVYGGPNPAA---PGPSKAREMLADSEYPAVIIGDAPGLK--VKDEMEE------------  111 (283)
T ss_dssp             HHHHHHHHHHHHHHHCCSEEEEECSCTTS---HHHHHHHHHHHTSSSCEEEEEEGGGGG--GHHHHHH------------
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEECCCCCC---CCCHHHHHHHHHCCCCEEEECCCCCHH--HHHHHHH------------
T ss_conf             99999887778874089989997899889---995679999974799879982786344--6899986------------


Q ss_pred             CCCCCCEEEEECCCCCEEEEEEEEH--HHCCCCCC--------------CCHHH----HHHHHHHHCCCCC----CCCEE
Q ss_conf             8875407999848992899999600--00588332--------------59899----9999986341368----99889
Q gi|254780659|r   94 NTPGNGSGLYCAKNGSNVLVANIMG--RVFMNPLL--------------DDPFR----TADKILATCPLKE----QADVI  149 (274)
Q Consensus        94 ~~PG~G~~i~~~~~g~ki~Vinl~G--r~fM~~~~--------------d~PF~----~~d~~l~~~~~~~----~~~~i  149 (274)
                        .|.||.|... + -      ++|  |-|++|.-              ---|+    .+|+++++++.++    +-+-|
T Consensus       112 --~g~GYIivk~-D-p------MIGArREFLDP~EMa~fNaD~~kVLa~tG~~RlvQ~elD~vi~~v~~Gk~~e~~LP~i  181 (283)
T 1qv9_A          112 --QGLGYILVKP-D-A------MLGARREFLDPVEMAIYNADLMKVLAATGVFRVVQEAFDELIEKAKEDEISENDLPKL  181 (283)
T ss_dssp             --TTCEEEEETT-S-C------CCCCCTTTCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCGGGSCEE
T ss_pred             --CCCCEEEEEC-C-C------CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
T ss_conf             --5984799836-7-6------4440121148899987303699999863089999999999999986577676668717


Q ss_pred             EEE
Q ss_conf             996
Q gi|254780659|r  150 VFD  152 (274)
Q Consensus       150 ~VD  152 (274)
                      +++
T Consensus       182 v~~  184 (283)
T 1qv9_A          182 VID  184 (283)
T ss_dssp             EEC
T ss_pred             EEC
T ss_conf             874


No 50 
>3max_A HD2, histone deacetylase 2; class 2, HDAC, foot pocket, hydrolase; HET: LLX NHE; 2.05A {Homo sapiens}
Probab=54.78  E-value=11  Score=17.40  Aligned_cols=61  Identities=25%  Similarity=0.341  Sum_probs=29.7

Q ss_pred             CCHHHHHHHHHHHCCCCCCCCEEEEEC---CCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCC
Q ss_conf             598999999986341368998899962---57622899999976089577998069762465456403672898405601
Q gi|254780659|r  127 DDPFRTADKILATCPLKEQADVIVFDF---HAETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMC  203 (274)
Q Consensus       127 d~PF~~~d~~l~~~~~~~~~~~i~VDf---HaEaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMt  203 (274)
                      +|.-.++..+++.     .-.+.+|||   |+.-|.|    .+|-|.+|- .+-.|.|-     +. +-||+...|+|.-
T Consensus       148 NnvAiAa~~l~~~-----~~RVlIvD~DvHHGnGTq~----iF~~d~~Vl-~~S~H~~~-----~~-~pgtg~~~e~G~g  211 (367)
T 3max_A          148 NDIVLAILELLKY-----HQRVLYIDIDIHHGDGVEE----AFYTTDRVM-TVSFHKYG-----EY-FPGTGDLRDIGAG  211 (367)
T ss_dssp             CHHHHHHHHHTTT-----CSCEEEEECSSSCCHHHHH----HTTTCSSEE-EEEEEECS-----SC-TTCCCCTTCCCCG
T ss_pred             CHHHHHHHHHHHC-----CCEEEEEECCCCCCCCHHH----HHHCCCCCE-EEECCCCC-----CC-CCCCCCHHHCCCC
T ss_conf             5599999999862-----8869999588888844434----741598653-67535467-----77-9999987663888


No 51 
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, amino-acid biosynthesis cobalamin, precorrin, novel fold; 2.10A {Thermotoga maritima}
Probab=54.77  E-value=5.5  Score=19.38  Aligned_cols=68  Identities=16%  Similarity=0.057  Sum_probs=42.8

Q ss_pred             EEEEECCC-HHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCC-CHHHHHHHHHCCCCEEEECHHHHCCCCHHHHH
Q ss_conf             99972027-688999999808988860998999917004788678-99999999837998999342653022204754
Q gi|254780659|r    4 LFLGDIVG-KTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGI-TEKIFCEMMETGIDVITTGNHVWDKREALVFS   79 (274)
Q Consensus         4 LfiGDIvG-~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Gi-t~~~~~~l~~~GvDviT~GNH~wd~kei~~~i   79 (274)
                      |++=||-. ..++..-.+.+.++.++..+-+.+        |-|| +.+.+++++++|+|-+..|--.+.+++..+.+
T Consensus        47 i~i~did~~~~~~g~n~~lI~~I~~~~~iPl~v--------GGGIr~~ed~~~ll~~GadkVii~s~~~~~~~~~~~i  116 (266)
T 2w6r_A           47 ILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIA--------SGGAGKMEHFLEAFLAGADKALAASVFHFREIDMREL  116 (266)
T ss_dssp             EEEEETTTSSCSSCCCHHHHHHHGGGCCSCEEE--------ESCCCSTHHHHHHHHHTCSEEECCCCC------CHHH
T ss_pred             EEEEEEECCCCCCCCCHHHHHHHHHEECCEEEE--------CCCCCCCCCHHHHHHHHHHHEEECCCCCCCCHHHHHH
T ss_conf             999996087557886677764345324854997--------6772120210033322000001133224551122667


No 52 
>1fs0_G ATP synthase gamma subunit; coiled coil, epsilon, hydrolase; 2.10A {Escherichia coli} SCOP: c.49.2.1
Probab=54.45  E-value=3.6  Score=20.57  Aligned_cols=10  Identities=20%  Similarity=0.215  Sum_probs=3.6

Q ss_pred             HHHHHHHHHH
Q ss_conf             9999999863
Q gi|254780659|r  130 FRTADKILAT  139 (274)
Q Consensus       130 F~~~d~~l~~  139 (274)
                      ++.+.+.+++
T Consensus        78 ~k~~~~~~~~   87 (230)
T 1fs0_G           78 FKKLLAEMKT   87 (230)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
T ss_conf             9999999766


No 53 
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium}
Probab=52.90  E-value=12  Score=17.21  Aligned_cols=10  Identities=30%  Similarity=0.697  Sum_probs=4.7

Q ss_pred             CCCEEEECHH
Q ss_conf             9989993426
Q gi|254780659|r   59 GIDVITTGNH   68 (274)
Q Consensus        59 GvDviT~GNH   68 (274)
                      .||.|-.|..
T Consensus        25 ~v~~ikvg~~   34 (211)
T 3f4w_A           25 DVDIIEVGTP   34 (211)
T ss_dssp             GCSEEEECHH
T ss_pred             CCCEEEECEE
T ss_conf             8779994662


No 54 
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=52.47  E-value=12  Score=17.27  Aligned_cols=12  Identities=17%  Similarity=0.440  Sum_probs=5.9

Q ss_pred             EEEEECCCCCCC
Q ss_conf             799806976246
Q gi|254780659|r  173 SLVVGTHTHIPT  184 (274)
Q Consensus       173 saVvGTHTHV~T  184 (274)
                      ..+++|--..|-
T Consensus       146 ~~i~~TRKt~Pg  157 (296)
T 1qap_A          146 TQLLDTRKTLPG  157 (296)
T ss_dssp             CEEECCSCCCTT
T ss_pred             EEEEECCCCCCC
T ss_conf             399835875632


No 55 
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis}
Probab=52.47  E-value=9.8  Score=17.73  Aligned_cols=31  Identities=10%  Similarity=0.082  Sum_probs=22.4

Q ss_pred             HHHHHHHCCCCEEEECHHHHCCCCHHHHHHH
Q ss_conf             9999983799899934265302220475421
Q gi|254780659|r   51 IFCEMMETGIDVITTGNHVWDKREALVFSQR   81 (274)
Q Consensus        51 ~~~~l~~~GvDviT~GNH~wd~kei~~~i~~   81 (274)
                      ...++++.|||.|-.=+.-++.+|+..+...
T Consensus        34 ~i~~~~~~gv~~iqlR~K~~~~~e~~~l~~~   64 (221)
T 1yad_A           34 RIIITIQNEVDFIHIRERSKSAADILKLLDL   64 (221)
T ss_dssp             HHHHHHGGGCSEEEECCTTSCHHHHHHHHHH
T ss_pred             HHHHHHHCCCCEEEECCCCCCHHHHHHHHHH
T ss_conf             9999997899899976899799999999999


No 56 
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, GMP reductase domain, structural genomics; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=51.69  E-value=12  Score=17.08  Aligned_cols=18  Identities=28%  Similarity=0.148  Sum_probs=7.4

Q ss_pred             CHHHHHHHHHCCCCEEEE
Q ss_conf             999999998379989993
Q gi|254780659|r   48 TEKIFCEMMETGIDVITT   65 (274)
Q Consensus        48 t~~~~~~l~~~GvDviT~   65 (274)
                      |++.++.|.++|+|.|--
T Consensus       221 t~e~A~~l~~aGad~I~V  238 (393)
T 2qr6_A          221 DYTTALHMMRTGAVGIIV  238 (393)
T ss_dssp             SHHHHHHHHTTTCSEEEE
T ss_pred             CHHHHHHHHHCCCCEEEE
T ss_conf             999999999769987998


No 57 
>1c3p_A Protein (HDLP (histone deacetylase-like protein) ); alpha/beta fold, lyase; 1.80A {Aquifex aeolicus} SCOP: c.42.1.2 PDB: 1c3r_A* 1c3s_A*
Probab=51.01  E-value=13  Score=17.02  Aligned_cols=70  Identities=16%  Similarity=0.307  Sum_probs=31.7

Q ss_pred             CCEEEEEC---CCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCHHHCC------CCCHHH
Q ss_conf             98899962---576228999999760895779980697624654564036728984056013712103------547467
Q gi|254780659|r  146 ADVIVFDF---HAETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCGDYNSSI------GLDKEE  216 (274)
Q Consensus       146 ~~~i~VDf---HaEaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG~~~SVI------G~~~~~  216 (274)
                      ..+.+|||   |+.-|.|    .+|-|-+|- .+-.|-|    +.-..|.||++..++|......+.+      |+.-+.
T Consensus       160 ~RV~ivD~DvHHGnGtq~----if~~d~~V~-~~SiH~~----~~~~~p~~tG~~~e~G~~~g~g~~~NipL~~g~~D~~  230 (375)
T 1c3p_A          160 KRILYIDLDAHHCDGVQE----AFYDTDQVF-VLSLHQS----PEYAFPFEKGFLEEIGEGKGKGYNLNIPLPKGLNDNE  230 (375)
T ss_dssp             CCEEEEECSSSCCHHHHH----HHTTCSSEE-EEEEEEC----TTTSTTSSSCCTTCCCCGGGTTSEEEEEECTTCCHHH
T ss_pred             CEEEEEECCCCCCCHHHH----HHHCCCCEE-EEEECCC----CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHH
T ss_conf             828999566778723668----762368879-9960458----8889988888810047877887357423898999689


Q ss_pred             HHHHHHHC
Q ss_conf             89888516
Q gi|254780659|r  217 PINRFITQ  224 (274)
Q Consensus       217 ~i~rf~t~  224 (274)
                      -+.-|...
T Consensus       231 y~~~~~~~  238 (375)
T 1c3p_A          231 FLFALEKS  238 (375)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
T ss_conf             99999999


No 58 
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=50.09  E-value=13  Score=16.92  Aligned_cols=84  Identities=13%  Similarity=0.148  Sum_probs=42.3

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH
Q ss_conf             92699972027688999999808988860998999917004788678999999998379989993426530222047542
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQ   80 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~   80 (274)
                      |||+|+|-  ..-|...++..+.   ..|++..|+..-.+. +.......+.+...+.|+.+++..+-  +..|..+.|.
T Consensus         1 Mki~~~g~--~~~~~~~l~~L~~---~~~~i~~V~t~~d~~-~~~~~~~~v~~~a~~~~i~~~~~~~~--~~~~~~~~l~   72 (660)
T 1z7e_A            1 MKTVVFAY--HDMGCLGIEALLA---AGYEISAIFTHTDNP-GEKAFYGSVARLAAERGIPVYAPDNV--NHPLWVERIA   72 (660)
T ss_dssp             CEEEEEEC--HHHHHHHHHHHHH---TTCEEEEEECCCC---------CCHHHHHHHHTCCEECCSCT--TSHHHHHHHH
T ss_pred             CEEEEEEC--CHHHHHHHHHHHH---CCCCEEEEECCCCCC-CCCCCCCHHHHHHHHCCCCEECCCCC--CCHHHHHHHH
T ss_conf             95999907--6899999999997---899789998389999-77678887999999879978846989--9899999998


Q ss_pred             H-CCCEEEECCCC
Q ss_conf             1-89389750079
Q gi|254780659|r   81 R-HCKFLRPANYP   92 (274)
Q Consensus        81 ~-~~~ilRP~N~p   92 (274)
                      + .+.++--+.|+
T Consensus        73 ~~~~D~~~~~~~~   85 (660)
T 1z7e_A           73 QLSPDVIFSFYYR   85 (660)
T ss_dssp             HHCCSEEEEESCC
T ss_pred             HCCCCEEEEEHHH
T ss_conf             4598999983222


No 59 
>3oee_G ATP synthase subunit gamma; ATP phosphatase, F1F0 ATPase, ATP synthesis, H ADP, PO4, mitochondria; HET: ANP; 2.74A {Saccharomyces cerevisiae} PDB: 2wpd_G* 3fks_G 2hld_G* 3oeh_G* 3ofn_G* 3oe7_G*
Probab=50.02  E-value=3.5  Score=20.60  Aligned_cols=13  Identities=8%  Similarity=0.107  Sum_probs=7.9

Q ss_pred             CCHHHHHHHHHHH
Q ss_conf             5989999999863
Q gi|254780659|r  127 DDPFRTADKILAT  139 (274)
Q Consensus       127 d~PF~~~d~~l~~  139 (274)
                      .+-|+.+.+.+++
T Consensus        89 sni~k~~~~~~~~  101 (278)
T 3oee_G           89 SQLAKAVRRHLND  101 (278)
T ss_dssp             HHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHC
T ss_conf             9999999876420


No 60 
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=49.49  E-value=11  Score=17.38  Aligned_cols=54  Identities=22%  Similarity=0.374  Sum_probs=32.6

Q ss_pred             HHHHHHHHHHHHHC-CCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHH
Q ss_conf             99999808988860-99899991700478867899999999837998999342653022204
Q gi|254780659|r   16 SIVYEMLPRLIRDF-QLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREAL   76 (274)
Q Consensus        16 ~~v~~~Lp~l~~~~-~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~   76 (274)
                      ....+.|+.|++.- +.-| -++|.++..   -++++.+++.+.|-   ..|||+|....+.
T Consensus        18 ~~t~~il~~L~~~~v~aTF-Fv~G~~~~~---~~~~~~~~~~~~Gh---eIgnHt~~H~~~~   72 (216)
T 2c71_A           18 VLTARVLDKLDKYNVKATF-MVVGQRVND---STAAIIRRMVNSGH---EIGNHSWSYSGMA   72 (216)
T ss_dssp             HHHHHHHHHHHHHTCCCEE-EECGGGCSH---HHHHHHHHHHHTTC---EEEECCSSSSCCT
T ss_pred             CCHHHHHHHHHHCCCCEEE-EEECCCCCC---CHHHHHHHHHHCCC---EEECCCCCCCCHH
T ss_conf             4099999999986981999-981623022---60999999998799---7853677667834


No 61 
>2zru_A Isopentenyl-diphosphate delta-isomerase; type 2, IDI, FMN, isopentenyl diphosphate isomerase, cytoplasm, flavoprotein, isoprene biosynthesis; HET: FMN; 2.00A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A*
Probab=49.22  E-value=13  Score=16.84  Aligned_cols=22  Identities=14%  Similarity=0.066  Sum_probs=7.9

Q ss_pred             CHHHHHHHHHCCCCEEEECHHH
Q ss_conf             9999999983799899934265
Q gi|254780659|r   48 TEKIFCEMMETGIDVITTGNHV   69 (274)
Q Consensus        48 t~~~~~~l~~~GvDviT~GNH~   69 (274)
                      +++.+..+.++|+|.|...||-
T Consensus       200 ~~e~a~~~~~~Gad~I~Vsn~g  221 (368)
T 2zru_A          200 SMETAKLLYSYGIKNFDTSGQG  221 (368)
T ss_dssp             CHHHHHHHHHTTCCEEECCCBT
T ss_pred             CHHHHHHHHHHCCCEEEEEECC
T ss_conf             3999999998189979998468


No 62 
>3gr6_A Enoyl-[acyl-carrier-protein] reductase [NADH]; enoyl reductase, NADP, triclosan, oxidoreductase; HET: NAP TCL; 2.28A {Staphylococcus aureus} PDB: 3gns_A* 3gnt_A
Probab=48.49  E-value=7.7  Score=18.42  Aligned_cols=41  Identities=12%  Similarity=0.041  Sum_probs=28.9

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHH
Q ss_conf             47886789999999983799899934265302220475421
Q gi|254780659|r   41 SAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQR   81 (274)
Q Consensus        41 aa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~   81 (274)
                      ++++.||...++++|.+.|.+|+..+..-=+.+++...++.
T Consensus        18 aas~~GIG~aiA~~la~~G~~V~i~~r~~~~~~~~~~~~~~   58 (260)
T 3gr6_A           18 IANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQ   58 (260)
T ss_dssp             CCSTTCHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
T ss_conf             99984799999999998799999996888889999999874


No 63 
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, X-RAY analysis, stability, calorimetry lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=48.23  E-value=14  Score=16.74  Aligned_cols=151  Identities=15%  Similarity=0.124  Sum_probs=88.6

Q ss_pred             HHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCC-HHHHHHHCCCEEEECCCCCCCC
Q ss_conf             999808988860998999917004788678999999998379989993426530222-0475421893897500798887
Q gi|254780659|r   18 VYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKRE-ALVFSQRHCKFLRPANYPPNTP   96 (274)
Q Consensus        18 v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~ke-i~~~i~~~~~ilRP~N~p~~~P   96 (274)
                      +-+.+.++|++.+.-+++----|.--.+|+ .+-++++.++|+|.+-.-+--++..+ ..+.+.+..--+-|+=-| .+|
T Consensus        68 ~~~~~~~~r~~~~~p~vlm~Y~N~i~~~G~-~~f~~~~~~~Gv~g~iipDlp~ee~~~~~~~~~~~gl~~i~lvsp-tt~  145 (248)
T 1geq_A           68 AFWIVKEFRRHSSTPIVLMTYYNPIYRAGV-RNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAP-NTP  145 (248)
T ss_dssp             HHHHHHHHHTTCCCCEEEEECHHHHHHHCH-HHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECT-TCC
T ss_pred             HHHHHHHHHHCCCCCEEEEECCCCCCCCCH-HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEECC-CCH
T ss_conf             999999997346987899806650123579-999999986798578605788667666765652169515898578-881


Q ss_pred             CCCE-EEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH--HHHHHHHHCCCEE
Q ss_conf             5407-999848992899999600005883325989999999863413689988999625762289--9999976089577
Q gi|254780659|r   97 GNGS-GLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSE--KQCFAHFVDSRAS  173 (274)
Q Consensus        97 G~G~-~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSE--K~A~g~~lDGrVs  173 (274)
                      -.-. .+.....| -+-.+..+|.+..+..+..   .+.+.+++++...+.+ ++|-|= =.|.|  |+++.++-||   
T Consensus       146 ~~ri~~i~~~s~g-fiY~vs~~GvTG~~~~~~~---~~~~~i~~iK~~t~~P-v~vGFG-I~t~e~v~~~~~~~ADG---  216 (248)
T 1geq_A          146 DERLKVIDDMTTG-FVYLVSLYGTTGAREEIPK---TAYDLLRRAKRICRNK-VAVGFG-VSKREHVVSLLKEGANG---  216 (248)
T ss_dssp             HHHHHHHHHHCSS-EEEEECCC-------CCCH---HHHHHHHHHHHHCSSC-EEEESC-CCSHHHHHHHHHTTCSE---
T ss_pred             HHHHHHHHHCCCC-EEEEECCCCCCCCCCCCCH---HHHHHHHHHHCCCCCC-EEEEEC-CCCHHHHHHHHHCCCCE---
T ss_conf             9999877634897-1798414555787754320---2577888751046786-379824-69999999998748999---


Q ss_pred             EEEECC
Q ss_conf             998069
Q gi|254780659|r  174 LVVGTH  179 (274)
Q Consensus       174 aVvGTH  179 (274)
                      +|+||+
T Consensus       217 VIVGSa  222 (248)
T 1geq_A          217 VVVGSA  222 (248)
T ss_dssp             EEECHH
T ss_pred             EEECHH
T ss_conf             998889


No 64 
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=47.95  E-value=8.8  Score=18.02  Aligned_cols=51  Identities=18%  Similarity=0.271  Sum_probs=32.1

Q ss_pred             HHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHH
Q ss_conf             9980898886099899991700478867899999999837998999342653022204
Q gi|254780659|r   19 YEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREAL   76 (274)
Q Consensus        19 ~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~   76 (274)
                      .+.|+.|++..-.=-.-++|+++..    .+...+++.+.|-   +.|||+|..+.+.
T Consensus        71 ~~iLd~Lk~~~vkATFFv~g~~i~~----~p~~~~~~~~~Gh---eIgnHt~~H~~l~  121 (247)
T 2j13_A           71 GKILDVLKEKKVPATFFVTGHYIKT----QKDLLLRMKDEGH---IIGNHSWSHPDFT  121 (247)
T ss_dssp             HHHHHHHHHHTCCEEEEECHHHHHH----CHHHHHHHHHTTC---EEEECCSSCCCGG
T ss_pred             HHHHHHHHHCCCCEEEEEECHHHHH----CHHHHHHHHHCCC---EEEECCCCCCCCC
T ss_conf             9999999986983999986624566----9999999985798---8972214578743


No 65 
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=47.66  E-value=14  Score=16.68  Aligned_cols=16  Identities=19%  Similarity=0.208  Sum_probs=8.1

Q ss_pred             HHHHHHHHHHHHHHHH
Q ss_conf             6889999998089888
Q gi|254780659|r   12 KTGRSIVYEMLPRLIR   27 (274)
Q Consensus        12 ~~Gr~~v~~~Lp~l~~   27 (274)
                      +..+.++++.||.-.+
T Consensus        32 ~~~~~~l~~~l~~~i~   47 (320)
T 3paj_A           32 QDRLAYLKQQLPADIT   47 (320)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
T ss_conf             7668999988189999


No 66 
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=47.61  E-value=13  Score=16.86  Aligned_cols=52  Identities=15%  Similarity=0.228  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHHCCCCEE-EECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHH
Q ss_conf             99980898886099899-9917004788678999999998379989993426530222047
Q gi|254780659|r   18 VYEMLPRLIRDFQLDFV-IANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALV   77 (274)
Q Consensus        18 v~~~Lp~l~~~~~~Dfv-IaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~   77 (274)
                      ..+.|+.|++ |++-.+ -++|++...    .++.++++.+.|.   ..|||+|+.+.+..
T Consensus        19 ~~~il~~L~~-~~i~aTFFv~g~~~~~----~p~~~~~~~~~Gh---eIg~Hs~~H~~~~~   71 (195)
T 2cc0_A           19 TQSLLNALRQ-NGLRATMFNQGQYAAQ----NPSLVRAQVDAGM---WVANHSYTHPHMTQ   71 (195)
T ss_dssp             HHHHHHHHHH-TTCCCEEEECHHHHHH----CHHHHHHHHHTTC---EEEECCSSCCCGGG
T ss_pred             HHHHHHHHHH-CCCCEEEEEECHHHHH----CHHHHHHHHHCCC---EEECCCCCCCCHHH
T ss_conf             9999999998-7981899997833566----9999999997698---84200034715766


No 67 
>2ck3_G ATP synthase gamma chain; ATP phosphorylase, ATP phosphorylase (H+ transporting), F1FO ATP synthase, F1-ATPase, hydrolase, ATP synthesis; HET: ANP ADP; 1.9A {Bos taurus} SCOP: c.49.2.1 PDB: 1cow_G* 1bmf_G* 1e1q_G* 1e1r_G* 1efr_G* 1e79_G* 1h8h_G* 1nbm_G* 1ohh_G* 1qo1_G 1w0j_G* 1w0k_G* 1h8e_G* 2jiz_G* 2jj1_G* 2jj2_G* 2v7q_G* 2wss_G* 2xnd_G* 2w6j_G ...
Probab=46.54  E-value=4  Score=20.29  Aligned_cols=18  Identities=33%  Similarity=0.709  Sum_probs=9.6

Q ss_pred             ECCCCCCCHHHCCCCCHH
Q ss_conf             405601371210354746
Q gi|254780659|r  198 TDLGMCGDYNSSIGLDKE  215 (274)
Q Consensus       198 TDvGMtG~~~SVIG~~~~  215 (274)
                      +|-|+||+||+-|-...+
T Consensus        73 SDrGLCG~fN~~iik~~~   90 (272)
T 2ck3_G           73 SDRGLCGAIHSSVAKQMK   90 (272)
T ss_dssp             CSCCCSSSSHHHHC----
T ss_pred             CCCCCCCCCCHHHHHHHH
T ss_conf             698764234778999999


No 68 
>2xok_G ATP synthase subunit gamma, mitochondrial; hydrolase, ATP-binding, F(O), F(1), mitochondr inner membrane, transmembrane; HET: ANP; 3.01A {Saccharomyces cerevisiae}
Probab=46.13  E-value=4.3  Score=20.03  Aligned_cols=16  Identities=31%  Similarity=0.686  Sum_probs=9.7

Q ss_pred             EEEE---ECCCCCCCHHHC
Q ss_conf             2898---405601371210
Q gi|254780659|r  194 TGYI---TDLGMCGDYNSS  209 (274)
Q Consensus       194 Tayi---TDvGMtG~~~SV  209 (274)
                      ++||   ||-|+||+|+|-
T Consensus       105 ~l~IvitSDrGLCG~fNsn  123 (311)
T 2xok_G          105 ELIVAITSDKGLCGSIHSQ  123 (311)
T ss_dssp             EEEEEECCSCCSSTTHHHH
T ss_pred             EEEEEEECCCCCHHHHHHH
T ss_conf             5999996897426789999


No 69 
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.30A {Pseudomonas syringae PV}
Probab=45.64  E-value=11  Score=17.34  Aligned_cols=27  Identities=11%  Similarity=0.192  Sum_probs=9.4

Q ss_pred             HHHHCCCCEEEECHHHHCCCCHHHHHH
Q ss_conf             998379989993426530222047542
Q gi|254780659|r   54 EMMETGIDVITTGNHVWDKREALVFSQ   80 (274)
Q Consensus        54 ~l~~~GvDviT~GNH~wd~kei~~~i~   80 (274)
                      ++.+.|+||+-+==.+..++|...+++
T Consensus        29 ~l~~~G~DVViG~vEtHgR~eT~al~~   55 (228)
T 2r8r_A           29 AQLRQGVRVMAGVVETHGRAETEALLN   55 (228)
T ss_dssp             HHHHTTCCEEEEECCCTTCHHHHHHHT
T ss_pred             HHHHCCCCEEEEEECCCCCHHHHHHHC
T ss_conf             999789967999952799889999976


No 70 
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=45.24  E-value=16  Score=16.44  Aligned_cols=85  Identities=13%  Similarity=0.139  Sum_probs=43.3

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH
Q ss_conf             92699972027688999999808988860998999917004788678999999998379989993426530222047542
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQ   80 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~   80 (274)
                      |||+|+|-  +.-|...++..+.   ..|.+-.|+.+-.. .++.+......+...+.|+.+++..+  .+..++.+.+.
T Consensus         1 Mkiv~~~~--~~~~~~~l~~L~~---~~~~i~~V~t~~~~-~~~~~~~~~v~~~a~~~~ip~~~~~~--~~~~~~~~~l~   72 (305)
T 2bln_A            1 MKTVVFAY--HDMGCLGIEALLA---AGYEISAIFTHTDN-PGEKAFYGSVARLAAERGIPVYAPDN--VNHPLWVERIA   72 (305)
T ss_dssp             CEEEEEEC--HHHHHHHHHHHHH---TTCEEEEEECCCC-------CCCCHHHHHHHHTCCEECCSC--CCSHHHHHHHH
T ss_pred             CEEEEECC--CHHHHHHHHHHHH---CCCCEEEEEECCCC-CCCCCCCCHHHHHHHHCCCCEECCCC--CCCHHHHHHHH
T ss_conf             95999927--7899999999997---89988999908999-98878989899999986998984598--99899999998


Q ss_pred             H-CCCEEEECCCCC
Q ss_conf             1-893897500798
Q gi|254780659|r   81 R-HCKFLRPANYPP   93 (274)
Q Consensus        81 ~-~~~ilRP~N~p~   93 (274)
                      + .+.++=-++|+.
T Consensus        73 ~~~~dl~i~~~~~~   86 (305)
T 2bln_A           73 QLSPDVIFSFYYRH   86 (305)
T ss_dssp             HTCCSEEEEESCCS
T ss_pred             HCCCCEEEEEHHHH
T ss_conf             32999999863212


No 71 
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=45.06  E-value=16  Score=16.43  Aligned_cols=52  Identities=19%  Similarity=0.219  Sum_probs=29.8

Q ss_pred             HHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHH
Q ss_conf             9888609989999170047886789999999983799899934265302220475421
Q gi|254780659|r   24 RLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQR   81 (274)
Q Consensus        24 ~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~   81 (274)
                      .+|++.++ ++|.+-+...     --+..++.++.||++|-.=.--++..|.+++..+
T Consensus        10 ~~~~~l~L-y~ITd~~~~~-----~~~~v~~al~~Gv~~iqlR~K~~~~~~~~~~a~~   61 (215)
T 1xi3_A           10 NLRNKLKL-YVITDRRLKP-----EVESVREALEGGATAIQMRIKNAPTREMYEIGKT   61 (215)
T ss_dssp             CHHHHTSE-EEECCTTTSC-----HHHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHH
T ss_pred             CHHHCCEE-EEEECCCCCC-----HHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH
T ss_conf             73358769-9992886388-----8999999998799999987799899999999999


No 72 
>1ulu_A Enoyl-acyl carrier protein reductase; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.2.1.2 PDB: 2yw9_A*
Probab=45.03  E-value=12  Score=17.15  Aligned_cols=52  Identities=15%  Similarity=0.073  Sum_probs=32.0

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHCC-CEEEECCCC
Q ss_conf             4788678999999998379989993426530222047542189-389750079
Q gi|254780659|r   41 SAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQRHC-KFLRPANYP   92 (274)
Q Consensus        41 aa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~~-~ilRP~N~p   92 (274)
                      +++++||...++++|.+.|.+|+-.+...=..++......... ...-+++..
T Consensus        16 asg~~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   68 (261)
T 1ulu_A           16 VTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVT   68 (261)
T ss_dssp             CCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTT
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             99986499999999998799999981746679999997620487245414669


No 73 
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, quinolinic acid; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=42.41  E-value=10  Score=17.60  Aligned_cols=18  Identities=17%  Similarity=0.263  Sum_probs=9.5

Q ss_pred             HCCCEEEEEECCCCCCCC
Q ss_conf             089577998069762465
Q gi|254780659|r  168 VDSRASLVVGTHTHIPTA  185 (274)
Q Consensus       168 lDGrVsaVvGTHTHV~Ta  185 (274)
                      +.+.-..+++|.-..|-.
T Consensus       127 ~~~~~~~i~~TRKt~Pg~  144 (284)
T 1qpo_A          127 VRGTKAKIRDTRKTLPGL  144 (284)
T ss_dssp             TTTSSCEEECCSCCCTTC
T ss_pred             CCCCCCEEEECCCCCCCH
T ss_conf             157885698346666465


No 74 
>2qe7_G ATP synthase subunit gamma; blockage of ATP hydrolysis, F1-ATPase, single particle analysis, thermoalkaliphilic, hydrolase; 3.06A {Bacillus SP}
Probab=42.03  E-value=4.1  Score=20.20  Aligned_cols=15  Identities=40%  Similarity=0.802  Sum_probs=7.4

Q ss_pred             EEECCCCCCCHHHCC
Q ss_conf             984056013712103
Q gi|254780659|r  196 YITDLGMCGDYNSSI  210 (274)
Q Consensus       196 yiTDvGMtG~~~SVI  210 (274)
                      +-||-|+||+|||-|
T Consensus        81 itSDrGLCG~fNs~i   95 (286)
T 2qe7_G           81 ITSDRGLAGPYNANI   95 (286)
T ss_dssp             CCCTTCCCTHHHHHH
T ss_pred             EECCCCCCCHHHHHH
T ss_conf             967987764100779


No 75 
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=41.90  E-value=15  Score=16.56  Aligned_cols=52  Identities=15%  Similarity=0.186  Sum_probs=32.5

Q ss_pred             HHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHH
Q ss_conf             99808988860998999917004788678999999998379989993426530222047
Q gi|254780659|r   19 YEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALV   77 (274)
Q Consensus        19 ~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~   77 (274)
                      ...|+.|++..-.=-.-++|.++.    -.++..+++.+.|.   ..|||+|.+.....
T Consensus        59 ~~iL~~L~~~~i~aTfFv~g~~~~----~~~~~~~~~~~~Gh---eIgnHt~~H~~~~~  110 (240)
T 1ny1_A           59 PKVLDVLKKHRVTGTFFVTGHFVK----DQPQLIKRMSDEGH---IIGNHSFHHPDLTT  110 (240)
T ss_dssp             HHHHHHHHHTTCCCEEEECHHHHH----HCHHHHHHHHHTTC---EEEECCSSCCCGGG
T ss_pred             HHHHHHHHHCCCCEEEEEHHHHHH----HCHHHHHHHHHCCC---EEEECCCCCCCCCC
T ss_conf             999999998599889983234455----59899999985898---89843555687010


No 76 
>3kts_A Glycerol uptake operon antiterminator regulatory protein; structural genomics, PSI-2, protein structure initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=41.56  E-value=14  Score=16.83  Aligned_cols=31  Identities=32%  Similarity=0.595  Sum_probs=21.6

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEECH-HHHC
Q ss_conf             478867899999999837998999342-6530
Q gi|254780659|r   41 SAGGFGITEKIFCEMMETGIDVITTGN-HVWD   71 (274)
Q Consensus        41 aa~G~Git~~~~~~l~~~GvDviT~GN-H~wd   71 (274)
                      -|||+=-+++...+.+++|++.+|+.| ..|+
T Consensus       154 IAGGLI~~kedV~~aL~aGA~aVSTS~~~LW~  185 (192)
T 3kts_A          154 IAGGLIETSEQVNQVIASGAIAVTTSNKHLWE  185 (192)
T ss_dssp             EEESSCCSHHHHHHHHTTTEEEEEECCGGGGT
T ss_pred             EEECCCCCHHHHHHHHHCCCEEEECCCHHHHC
T ss_conf             97667288999999998599799879978972


No 77 
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=40.16  E-value=19  Score=15.94  Aligned_cols=21  Identities=33%  Similarity=0.447  Sum_probs=11.7

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHH
Q ss_conf             92699972027688999999808
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLP   23 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp   23 (274)
                      |||.|||  +|..|..++.+.|.
T Consensus        13 mkih~iG--igg~Gms~lA~~l~   33 (469)
T 1j6u_A           13 MKIHFVG--IGGIGMSAVALHEF   33 (469)
T ss_dssp             CEEEEET--TTSHHHHHHHHHHH
T ss_pred             CEEEEEE--ECHHHHHHHHHHHH
T ss_conf             7799998--86999999999999


No 78 
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus HB8}
Probab=40.09  E-value=16  Score=16.30  Aligned_cols=14  Identities=21%  Similarity=0.349  Sum_probs=7.7

Q ss_pred             HHHHHHHHHHCCCC
Q ss_conf             46789888516886
Q gi|254780659|r  214 KEEPINRFITQIPR  227 (274)
Q Consensus       214 ~~~~i~rf~t~~p~  227 (274)
                      .+..++++....|.
T Consensus       182 ~~~a~~~~k~~~~~  195 (286)
T 1x1o_A          182 VGEAVRRAKARAPH  195 (286)
T ss_dssp             HHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHHCC
T ss_conf             88899999987257


No 79 
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=39.40  E-value=4.6  Score=19.88  Aligned_cols=33  Identities=15%  Similarity=0.189  Sum_probs=22.9

Q ss_pred             HHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHH
Q ss_conf             999999983799899934265302220475421
Q gi|254780659|r   49 EKIFCEMMETGIDVITTGNHVWDKREALVFSQR   81 (274)
Q Consensus        49 ~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~   81 (274)
                      .+..+++++.|++++-.-.--|+..|...++.+
T Consensus        16 ~~~l~~~l~~Gv~~lqlR~k~~s~~e~~~ll~~   48 (210)
T 3ceu_A           16 DKIITALFEEGLDILHLRKPETPAMYSERLLTL   48 (210)
T ss_dssp             HHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH
T ss_conf             999999998799889983799999999999999


No 80 
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM- barrel, rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=39.22  E-value=19  Score=15.85  Aligned_cols=35  Identities=14%  Similarity=0.246  Sum_probs=13.9

Q ss_pred             EEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHH
Q ss_conf             999917004788678999999998379989993426
Q gi|254780659|r   33 FVIANGENSAGGFGITEKIFCEMMETGIDVITTGNH   68 (274)
Q Consensus        33 fvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH   68 (274)
                      .+++--|+-.|-.| ..-++..|...|-+|+-+|..
T Consensus         6 Vvi~~~~~D~H~lG-~~~va~~l~~~G~~V~~LG~~   40 (137)
T 1ccw_A            6 IVLGVIGSDCHAVG-NKILDHAFTNAGFNVVNIGVL   40 (137)
T ss_dssp             EEEEEETTCCCCHH-HHHHHHHHHHTTCEEEEEEEE
T ss_pred             EEEEECCCCHHHHH-HHHHHHHHHHCCCEEEECCCC
T ss_conf             99994698745899-999999999879879977866


No 81 
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolidine carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis H37RV} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 2aqh_A* 2aqk_A* ...
Probab=39.03  E-value=15  Score=16.50  Aligned_cols=36  Identities=19%  Similarity=0.111  Sum_probs=26.9

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHH
Q ss_conf             478867899999999837998999342653022204754
Q gi|254780659|r   41 SAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFS   79 (274)
Q Consensus        41 aa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i   79 (274)
                      +|++.||...+++.|.+.|++|+-++.   ++.+..+-+
T Consensus        15 aag~~GIG~aiA~~la~~Ga~Vvi~~~---~~~~l~~~~   50 (269)
T 2h7i_A           15 IITDSSIAFHIARVAQEQGAQLVLTGF---DRLRLIQRI   50 (269)
T ss_dssp             CSSTTSHHHHHHHHHHHTTCEEEEEEC---SCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHH
T ss_conf             999977999999999986999999968---837899999


No 82 
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 1g6c_A* 1g4e_A* 1g69_A* 1g4s_A* 1g4p_A* 1g67_A*
Probab=39.01  E-value=14  Score=16.82  Aligned_cols=43  Identities=9%  Similarity=0.142  Sum_probs=26.6

Q ss_pred             HHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHC
Q ss_conf             88860998999917004788678999999998379989993426530
Q gi|254780659|r   25 LIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWD   71 (274)
Q Consensus        25 l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd   71 (274)
                      +|+..++ +.|..-++..+   -.-+..++.++.|++++-.=+--+|
T Consensus        14 ~~~~~~~-Y~I~~~~~~~~---~~~~~v~~al~~Gv~~vqlR~K~~~   56 (227)
T 2tps_A           14 MKELLSV-YFIMGSNNTKA---DPVTVVQKALKGGATLYQFREKGGD   56 (227)
T ss_dssp             HHHHTTE-EEEECGGGCSS---CHHHHHHHHHHHTCSEEEECCCSTT
T ss_pred             HHHHCCE-EEEECCCCCCC---CHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf             9864889-99989532356---8899999999889989998679988


No 83 
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3h07_A
Probab=38.68  E-value=20  Score=15.80  Aligned_cols=55  Identities=24%  Similarity=0.332  Sum_probs=38.6

Q ss_pred             HHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECC-----------CC-CHHHHHHHHHH-HCCCEEEEE
Q ss_conf             005883325989999999863413689988999625-----------76-22899999976-089577998
Q gi|254780659|r  119 RVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFH-----------AE-TTSEKQCFAHF-VDSRASLVV  176 (274)
Q Consensus       119 r~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfH-----------aE-aTSEK~A~g~~-lDGrVsaVv  176 (274)
                      +.-|. ..-+||..++++++.++  ..-.++++|..           || +|.|+.+|-.- -.|-+-..+
T Consensus         3 ~~~~~-~~~~~~~~i~~ai~al~--~G~~Viv~Dd~dRE~EgDlv~aAe~iT~e~i~fm~~~~~GliC~a~   70 (217)
T 1g57_A            3 QTLLS-SFGTPFERVENALAALR--EGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCI   70 (217)
T ss_dssp             --CGG-GGCCHHHHHHHHHHHHH--TTCCEEEEC----CCCEEEEEETTTCCHHHHHHHHHHBCSCCEEEE
T ss_pred             HHHHH-HCCCCCCHHHHHHHHHH--CCCEEEEEECCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCEEECC
T ss_conf             34453-51896005999999998--7997999868998875178978575999999999994898889727


No 84 
>2cou_A ECT2 protein; BRCT domain, RHO GTPase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=38.41  E-value=5.4  Score=19.43  Aligned_cols=87  Identities=16%  Similarity=0.183  Sum_probs=54.4

Q ss_pred             EEEEEEECCCHHHHHHHHHHHHHHHHHC------CCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCH
Q ss_conf             2699972027688999999808988860------9989999170047886789999999983799899934265302220
Q gi|254780659|r    2 RLLFLGDIVGKTGRSIVYEMLPRLIRDF------QLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREA   75 (274)
Q Consensus         2 kiLfiGDIvG~~Gr~~v~~~Lp~l~~~~------~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei   75 (274)
                      .|.|-|  +-..-|..+++.+..+--++      +...+|+.-.+..        -++...+.|+-|+ +-+.+||--+.
T Consensus        17 ~i~~sG--~~~~~~~~l~~~i~~~GG~~~~~~~~~~THlI~~~~~~~--------k~~~a~~~~i~VV-~~~Wl~ds~~~   85 (109)
T 2cou_A           17 ILSFLG--FSDEEKHSMEEMTEMQGGSYLPVGDERCTHLIVEENTVK--------DLPFEPSKKLFVV-KQEWFWGSIQM   85 (109)
T ss_dssp             BEEEES--SCHHHHHHHHHHHHHHTCBCCCTTCTTCSEEEECTTTCS--------SCSSCCCTTSEEE-CHHHHHHHHHT
T ss_pred             EEEECC--CCHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCH--------HHHHHHHCCCCCC-CHHHHHHHHHC
T ss_conf             899858--986889999999998399997642898518997369847--------8898886378666-79999999983


Q ss_pred             HHHHHHCCCEEEECCCCCCCCCCC
Q ss_conf             475421893897500798887540
Q gi|254780659|r   76 LVFSQRHCKFLRPANYPPNTPGNG   99 (274)
Q Consensus        76 ~~~i~~~~~ilRP~N~p~~~PG~G   99 (274)
                      -..+++.++++++.+-|+..|..|
T Consensus        86 ~~~l~e~~Y~~~~~~~~~~~p~sg  109 (109)
T 2cou_A           86 DARAGETMYLYEKANTPESGPSSG  109 (109)
T ss_dssp             TSCCCGGGTBCCCCCCSCSSCCCC
T ss_pred             CCCCCHHHEECCCCCCCCCCCCCC
T ss_conf             984880524048999898899998


No 85 
>1o13_A Probable NIFB protein; structural genomics, TM1816, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=38.40  E-value=20  Score=15.77  Aligned_cols=12  Identities=25%  Similarity=0.517  Sum_probs=5.4

Q ss_pred             HHHHHHHHHHCC
Q ss_conf             467898885168
Q gi|254780659|r  214 KEEPINRFITQI  225 (274)
Q Consensus       214 ~~~~i~rf~t~~  225 (274)
                      .+.+|+.|+.+.
T Consensus       108 v~eal~~~~~g~  119 (136)
T 1o13_A          108 VEEVVNQYLSGQ  119 (136)
T ss_dssp             HHHHHHHHHTTC
T ss_pred             HHHHHHHHHHCC
T ss_conf             999999999787


No 86 
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=37.55  E-value=20  Score=15.68  Aligned_cols=47  Identities=30%  Similarity=0.412  Sum_probs=33.2

Q ss_pred             CEEEEE-EECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHH
Q ss_conf             926999-72027688999999808988860998999917004788678999
Q gi|254780659|r    1 MRLLFL-GDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEK   50 (274)
Q Consensus         1 MkiLfi-GDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~   50 (274)
                      ||||.- -|=+-.||.+++.+.|.   +.+++-.|-=..|.|+-|..||-.
T Consensus         1 M~ILlTNDDGi~s~Gi~~L~~~l~---~~~~V~vvAP~~~~S~~g~sit~~   48 (247)
T 1j9j_A            1 MRILVTNDDGIQSKGIIVLAELLS---EEHEVFVVAPDKERSATGHSITIH   48 (247)
T ss_dssp             CEEEEECSSCTTCHHHHHHHHHHT---TTSEEEEEEESSCCTTCTTCCCCS
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHH---CCCEEEEEECCCCCCCCCCCCCCC
T ss_conf             959997279989767999999986---699199994499876662444469


No 87 
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural genomics, JCSG, protein structure initiative, PSI; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=37.17  E-value=21  Score=15.64  Aligned_cols=77  Identities=19%  Similarity=0.157  Sum_probs=49.2

Q ss_pred             HHHHHHHCCCCEEEECCEE-CC--------CCCCCCHHHHH---------H-HHHCCCCEEEECHHHH-CCCCHHHHHHH
Q ss_conf             0898886099899991700-47--------88678999999---------9-9837998999342653-02220475421
Q gi|254780659|r   22 LPRLIRDFQLDFVIANGEN-SA--------GGFGITEKIFC---------E-MMETGIDVITTGNHVW-DKREALVFSQR   81 (274)
Q Consensus        22 Lp~l~~~~~~DfvIaNgEN-aa--------~G~Git~~~~~---------~-l~~~GvDviT~GNH~w-d~kei~~~i~~   81 (274)
                      +..+..++++|+||+--|. .+        .=||.+++.++         + +.++||-  |.--.++ +..|...|+++
T Consensus        62 ~~~~~~~~~~dlvvvgpE~pL~~gl~d~~~~vfGPs~~aA~LE~SK~faK~~m~~~~IP--ta~~~~f~~~~ea~~~~~~  139 (412)
T 1vkz_A           62 EKTLKAIPEEDIVIPGSEEFLVEGVSNWRSNVFGPVKEVARLEGSKVYAKRFMKKYGIR--TARFEVAETPEELREKIKK  139 (412)
T ss_dssp             HHHHHTSCSSCEECCSSGGGTCC-----CTTBSSCCHHHHHHHHCHHHHHHHHHHTTCC--CCCEEEESSHHHHHHHHTT
T ss_pred             HHHHHHHCCCCEEEECCCHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCC--CCCCCCCCCHHHHHHHHHH
T ss_conf             78776404799899897899997788758874497989999887599999999970889--8851102679999999871


Q ss_pred             C--CCEEEECCCCCCCCCCCEEEE
Q ss_conf             8--938975007988875407999
Q gi|254780659|r   82 H--CKFLRPANYPPNTPGNGSGLY  103 (274)
Q Consensus        82 ~--~~ilRP~N~p~~~PG~G~~i~  103 (274)
                      .  |-+|+|.-.   +.|+|..+.
T Consensus       140 ~~~PvVIKadgl---a~GKGV~i~  160 (412)
T 1vkz_A          140 FSPPYVIKADGL---ARGKGVLIL  160 (412)
T ss_dssp             SCSSEEEEESSC---CSSCCEEEE
T ss_pred             CCCCEEEEECCC---CCCCCEEEE
T ss_conf             799789970866---788864898


No 88 
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis}
Probab=36.67  E-value=16  Score=16.35  Aligned_cols=28  Identities=21%  Similarity=0.055  Sum_probs=23.9

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEECHH
Q ss_conf             4788678999999998379989993426
Q gi|254780659|r   41 SAGGFGITEKIFCEMMETGIDVITTGNH   68 (274)
Q Consensus        41 aa~G~Git~~~~~~l~~~GvDviT~GNH   68 (274)
                      +++++||...+++.|.+.|.+|+-.+..
T Consensus        39 ass~~GIG~aiA~~la~~Ga~Vvi~~r~   66 (293)
T 3grk_A           39 VANNRSIAWGIAKAAREAGAELAFTYQG   66 (293)
T ss_dssp             CCSSSSHHHHHHHHHHHTTCEEEEEECS
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             9999559999999999869999998387


No 89 
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A*
Probab=36.00  E-value=13  Score=16.95  Aligned_cols=26  Identities=19%  Similarity=0.046  Sum_probs=22.2

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf             47886789999999983799899934
Q gi|254780659|r   41 SAGGFGITEKIFCEMMETGIDVITTG   66 (274)
Q Consensus        41 aa~G~Git~~~~~~l~~~GvDviT~G   66 (274)
                      +|++.||.+.+|+.|.+.|.+|+-..
T Consensus        34 ~a~s~GIG~aiA~~la~~Ga~Vii~~   59 (280)
T 3nrc_A           34 LLSNKSIAYGIAKAMHREGAELAFTY   59 (280)
T ss_dssp             CCSTTCHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf             98873899999999998699999996


No 90 
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=35.90  E-value=13  Score=17.04  Aligned_cols=54  Identities=19%  Similarity=0.201  Sum_probs=22.4

Q ss_pred             HCCCEEEEEECCCCCCCCHHHHCC------CCEEEEECCCCCCCHHHCCCCC--------HHHHHHHHHHCCCC
Q ss_conf             089577998069762465456403------6728984056013712103547--------46789888516886
Q gi|254780659|r  168 VDSRASLVVGTHTHIPTADAQILD------GGTGYITDLGMCGDYNSSIGLD--------KEEPINRFITQIPR  227 (274)
Q Consensus       168 lDGrVsaVvGTHTHV~TaD~rILp------~GTayiTDvGMtG~~~SVIG~~--------~~~~i~rf~t~~p~  227 (274)
                      +.|.=..+++|--..|-.  |.|.      ||    -+-=..|.+|+|+-.+        .+..++++....|.
T Consensus       140 ~~~~~~~i~~TRKT~PGl--R~l~k~Av~~GG----g~~HR~~L~d~iLikdNHi~~~g~~~~ai~~~~~~~~~  207 (300)
T 3l0g_A          140 VSGTKVKIRSTRKTTPGL--RMLDKYSVCIGG----GESYRDNLCDGVLIKDNHIASCGSITLAIQRLRKNLKN  207 (300)
T ss_dssp             TTTSSCEEECCSCCCTTC--HHHHHHHHHHTT----CBCSCSSTTSCEEECHHHHHHHSCHHHHHHHHHHHSSS
T ss_pred             HCCCCCEEECCCCCCCCH--HHHHHHHHHHCC----CCCCCCCCCHHHEECCCHHHHCCCHHHHHHHHHHHCCC
T ss_conf             469984660277347427--999999999669----87514764344403543354305289999999974898


No 91 
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=35.38  E-value=22  Score=15.46  Aligned_cols=53  Identities=21%  Similarity=0.345  Sum_probs=29.9

Q ss_pred             HHHHHHHHHHHCCCCEE--EECCEECCCCCCCCHHHHHHHHHCCCCEEEEC----HHHHCCC
Q ss_conf             99980898886099899--99170047886789999999983799899934----2653022
Q gi|254780659|r   18 VYEMLPRLIRDFQLDFV--IANGENSAGGFGITEKIFCEMMETGIDVITTG----NHVWDKR   73 (274)
Q Consensus        18 v~~~Lp~l~~~~~~Dfv--IaNgENaa~G~Git~~~~~~l~~~GvDviT~G----NH~wd~k   73 (274)
                      +++.+.++|++.+.-||  +.-|.   -..--+.+..+.|.+.|||+|-.|    |-..|-+
T Consensus         4 i~~~f~~~k~~~~~ali~y~taG~---P~~~~~~~~l~~l~~~GaD~iEiGiPfSDP~aDGp   62 (268)
T 1qop_A            4 YENLFAQLNDRREGAFVPFVTLGD---PGIEQSLKIIDTLIDAGADALELGVPFSDPLADGP   62 (268)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEETTS---SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCH
T ss_pred             HHHHHHHHHHCCCCEEEEEEECCC---CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCH
T ss_conf             899999998749936898881707---98799999999999779999997898888654479


No 92 
>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, acetylation, arginase fold, HDAC8, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A*
Probab=35.03  E-value=22  Score=15.43  Aligned_cols=50  Identities=22%  Similarity=0.436  Sum_probs=29.5

Q ss_pred             CCEEEEEC---CCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCC
Q ss_conf             98899962---5762289999997608957799806976246545640367289840560137
Q gi|254780659|r  146 ADVIVFDF---HAETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCGD  205 (274)
Q Consensus       146 ~~~i~VDf---HaEaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG~  205 (274)
                      ..+.+|||   |+.-|.|    .+|-|.||-- +-.|-+    +....| ||....|+|.-..
T Consensus       170 ~RV~iiD~DvHHGdGtq~----iF~~d~~V~~-iSiH~~----~~~~fP-gtg~~~e~G~g~g  222 (388)
T 3ew8_A          170 ERILYVDLDLHHGDGVED----AFSFTSKVMT-VSLHKF----SPGFFP-GTGDVSDVGLGKG  222 (388)
T ss_dssp             SCEEEEECSSSCCHHHHH----HTTTCSSEEE-EEEEEC----CTTCTT-CCCCTTCCCCGGG
T ss_pred             CEEEEEECCCCCCCCCEE----EEECCCCEEE-EECCCC----CCCCCC-CCCCHHHCCCCCC
T ss_conf             728998568878865032----5752587268-840456----788789-9997522488766


No 93 
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA; HET: ADP; 2.00A {Pyrococcus horikoshii OT3}
Probab=34.88  E-value=22  Score=15.41  Aligned_cols=18  Identities=28%  Similarity=0.351  Sum_probs=7.5

Q ss_pred             CCHHHHHHHHHCCCCEEE
Q ss_conf             899999999837998999
Q gi|254780659|r   47 ITEKIFCEMMETGIDVIT   64 (274)
Q Consensus        47 it~~~~~~l~~~GvDviT   64 (274)
                      |.++..+.|.++||.++.
T Consensus        72 iG~~a~~~l~~~GI~v~~   89 (121)
T 2yx6_A           72 IGRRAIEYFNSLGISVVT   89 (121)
T ss_dssp             CCHHHHHHHHHTTCEEEC
T ss_pred             CCHHHHHHHHHCCCEEEE
T ss_conf             798899999987999998


No 94 
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein structure initiative; HET: MSE; 1.46A {Bacteroides thetaiotaomicron vpi-5482}
Probab=34.62  E-value=14  Score=16.70  Aligned_cols=55  Identities=16%  Similarity=0.279  Sum_probs=37.6

Q ss_pred             HHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHCCCEE
Q ss_conf             99808988860998999917004788678999999998379989993426530222047542189389
Q gi|254780659|r   19 YEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQRHCKFL   86 (274)
Q Consensus        19 ~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~~~il   86 (274)
                      .+.+.+|+++   ...+.=++|++..+|++++    +...|+.++..| |     ++..|+++--++|
T Consensus        61 ~~~i~~L~~~---GV~~~AC~n~a~~~gi~~~----~~~~gi~vv~~G-~-----~l~~~~~~Gy~vi  115 (117)
T 2fb6_A           61 QTEILEMLQS---GITIEACQDCCENFGVASI----ITNLGITVRYMG-I-----PLTEYLKNGEKIL  115 (117)
T ss_dssp             HHHHHHHHHH---TCEEEEEHHHHHHHTCHHH----HHHTTCEEECCH-H-----HHHHHHHTTCEEE
T ss_pred             HHHHHHHHHC---CCCHHHHHHHHHHCCCCHH----HHHCCCEEEECC-H-----HHHHHHHCCCEEE
T ss_conf             9999999987---9905998999998599888----985699798885-9-----8999998898686


No 95 
>3men_A Acetylpolyamine aminohydrolase; seattle structural genomics center for infectious disease (ssgcid), histone deacetylase; 2.20A {Burkholderia pseudomallei 1710B}
Probab=34.60  E-value=23  Score=15.38  Aligned_cols=61  Identities=20%  Similarity=0.290  Sum_probs=30.0

Q ss_pred             CCHHHHHHHHHHHCCCCCCCCEEEEEC---CCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCC
Q ss_conf             598999999986341368998899962---576228999999760895779980697624654564036728984056
Q gi|254780659|r  127 DDPFRTADKILATCPLKEQADVIVFDF---HAETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLG  201 (274)
Q Consensus       127 d~PF~~~d~~l~~~~~~~~~~~i~VDf---HaEaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvG  201 (274)
                      +|-=-++..+.+.     .-.+.+|||   |+.-|.|-    +|-|.+|-.+ --|.+    +....|+-+.+..++|
T Consensus       191 NnvAiaa~~~~~~-----~~rVaIiD~DvHhGnGTq~i----f~~d~~V~~~-SiH~~----~~~~~p~~~g~~~e~g  254 (362)
T 3men_A          191 NNAAIAAQALRAR-----HARVAVLDTDMHHGQGIQEI----FYARRDVLYV-SIHGD----PTNFYPAVAGFDDERG  254 (362)
T ss_dssp             CHHHHHHHHHTTT-----CSCEEEEECSSSCCHHHHHH----TTTCSSEEEE-EEEEC----CTTSTTCSSCCTTCCC
T ss_pred             HHHHHHHHHHHHH-----CCEEEEEECCCCCCCCHHHH----HCCCCCEEEE-ECCCC----CCCCCCCCCCCHHHCC
T ss_conf             4999999999970-----79289983478898521201----0215614775-10136----7767899899612137


No 96 
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=33.92  E-value=23  Score=15.31  Aligned_cols=28  Identities=18%  Similarity=0.220  Sum_probs=22.6

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEECHH
Q ss_conf             4788678999999998379989993426
Q gi|254780659|r   41 SAGGFGITEKIFCEMMETGIDVITTGNH   68 (274)
Q Consensus        41 aa~G~Git~~~~~~l~~~GvDviT~GNH   68 (274)
                      .|.|..-+.+..+.+...|+..++.|-=
T Consensus        60 lAsG~~~~~~~~~~~~~~G~G~vv~kti   87 (336)
T 1f76_A           60 LAAGLDKDGECIDALGAMGFGSIEIGTV   87 (336)
T ss_dssp             ECTTSSTTCCCHHHHHHTTCSEEEEEEE
T ss_pred             ECCCCCCCHHHHHHHHHCCCCEEEECCC
T ss_conf             6877777668999998648456660365


No 97 
>1zgg_A Putative low molecular weight protein-tyrosine- phosphatase YWLE; alpha/beta, four-stranded parallel beta sheet, structural genomics; NMR {Bacillus subtilis}
Probab=33.73  E-value=23  Score=15.29  Aligned_cols=78  Identities=14%  Similarity=0.174  Sum_probs=47.5

Q ss_pred             CEEEEE--EECCCHHHHHHHHHHHHHHHHHCCCCEEEECCE-ECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHH
Q ss_conf             926999--720276889999998089888609989999170-04788678999999998379989993426530222047
Q gi|254780659|r    1 MRLLFL--GDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGE-NSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALV   77 (274)
Q Consensus         1 MkiLfi--GDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgE-Naa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~   77 (274)
                      |||||+  |.+.=+|=-+++-++   +-++..+++.+.-+- -+..|....+...+-|.+.|+|.    +|. .++-.-+
T Consensus         1 M~ILfVC~gN~cRSpmAE~i~~~---~~~~~g~~~~v~SAG~~~~~~~~~~p~a~~~l~~~gi~~----~h~-~~~l~~~   72 (150)
T 1zgg_A            1 MDIIFVCTGNTCRSPMAEALFKS---IAEREGLNVNVRSAGVFASPNGKATPHAVEALFEKHIAL----NHV-SSPLTEE   72 (150)
T ss_dssp             CEEEEECTTSTTTHHHHHHHHHH---HHHHHTCCCEEEEEBTTCCTTCBCCTTHHHHHHHTTSCC----CCB-CCBCCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHH---HHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCC----CCC-CCCCHHH
T ss_conf             96999879954899999999999---999769972787544202478878879999999709872----234-3212186


Q ss_pred             HHHHCCCEE
Q ss_conf             542189389
Q gi|254780659|r   78 FSQRHCKFL   86 (274)
Q Consensus        78 ~i~~~~~il   86 (274)
                      .++..+.||
T Consensus        73 ~~~~~DlIl   81 (150)
T 1zgg_A           73 LMESADLVL   81 (150)
T ss_dssp             HHHHCSEEE
T ss_pred             HHHCCCEEH
T ss_conf             611058805


No 98 
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=33.72  E-value=22  Score=15.41  Aligned_cols=61  Identities=18%  Similarity=0.229  Sum_probs=38.6

Q ss_pred             HHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHCCCEEEEC
Q ss_conf             9808988860998999917004788678999999998379989993426530222047542189389750
Q gi|254780659|r   20 EMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQRHCKFLRPA   89 (274)
Q Consensus        20 ~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~~~ilRP~   89 (274)
                      +.+..|++++.++++|-      -|-=++++.++...++|+|.+-+=+  ++ +++.++..+..-..-|-
T Consensus        50 ~~I~~l~~~~~~~~~vG------aGTV~~~~~~~~a~~aGa~fivsP~--~~-~~v~~~~~~~~~~~iPG  110 (205)
T 1wa3_A           50 TVIKELSFLKEKGAIIG------AGTVTSVEQCRKAVESGAEFIVSPH--LD-EEISQFCKEKGVFYMPG  110 (205)
T ss_dssp             HHHHHTHHHHHTTCEEE------EESCCSHHHHHHHHHHTCSEEECSS--CC-HHHHHHHHHHTCEEECE
T ss_pred             HHHHHHHHHCCCCEEEE------EECCCCHHHHHHHHHCCCCEEECCC--CC-HHHHHHHHHCCCCCCCC
T ss_conf             99999997318982896------3000127889999864874886799--99-99999999839982277


No 99 
>2qk4_A Trifunctional purine biosynthetic protein adenosine-3; purine synthesis, enzyme, protein-ATP complex, structural genomics; HET: ATP; 2.45A {Homo sapiens}
Probab=33.42  E-value=23  Score=15.30  Aligned_cols=75  Identities=15%  Similarity=0.285  Sum_probs=39.9

Q ss_pred             HHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEE--------------------------ECHHHH-CC
Q ss_conf             980898886099899991700478867899999999837998999--------------------------342653-02
Q gi|254780659|r   20 EMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVIT--------------------------TGNHVW-DK   72 (274)
Q Consensus        20 ~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT--------------------------~GNH~w-d~   72 (274)
                      +.|-++-++.+||+||+--|..-     ..-+++.|.+.|+.|+-                          .=-.++ +.
T Consensus        78 ~~i~~~~~~~~iDlvivGpE~pL-----~~Gl~D~l~~~gi~vfGps~~aa~lE~sK~f~k~~m~~~~Ipta~~~~~~~~  152 (452)
T 2qk4_A           78 TALAQFCKEKKIEFVVVGPEAPL-----AAGIVGNLRSAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIPTAQWKAFTKP  152 (452)
T ss_dssp             HHHHHHHHHHTCCEEEECSSHHH-----HTTHHHHHHHTTCCEESCCTTTTHHHHBHHHHHHHHHHTTCCBCCEEEESSH
T ss_pred             HHHHHHHHHHCCCEEEECCCHHH-----HHHHHHHHHHCCCCEECCHHHHHHHHHCHHHHHHHHHHCCCCCCHHEEEECH
T ss_conf             99999999859999998973898-----9889999986799443550888887747999999998517999702399468


Q ss_pred             CCHHHHHHHCC---CEEEECCCCCCCCCCCEEE
Q ss_conf             22047542189---3897500798887540799
Q gi|254780659|r   73 REALVFSQRHC---KFLRPANYPPNTPGNGSGL  102 (274)
Q Consensus        73 kei~~~i~~~~---~ilRP~N~p~~~PG~G~~i  102 (274)
                      .|..+++++..   -++||.=.   +.|+|..+
T Consensus       153 ~ea~~~i~~~~~P~vVIK~dgl---a~GKGV~v  182 (452)
T 2qk4_A          153 EEACSFILSADFPALVVKASGL---AAGKGVIV  182 (452)
T ss_dssp             HHHHHHHHHCSSCEEEEEESBC------CCEEE
T ss_pred             HHHHHHHHHCCCCCEEEECCCC---CCCCCEEE
T ss_conf             9999999866998278734765---78876065


No 100
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier- protein) reductase, NAD; HET: NAD; 1.80A {Anaplasma phagocytophilum HZ} PDB: 3k2e_A*
Probab=33.14  E-value=16  Score=16.44  Aligned_cols=52  Identities=15%  Similarity=0.048  Sum_probs=31.1

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHH-CCCEEEECCCC
Q ss_conf             47886789999999983799899934265302220475421-89389750079
Q gi|254780659|r   41 SAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQR-HCKFLRPANYP   92 (274)
Q Consensus        41 aa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~-~~~ilRP~N~p   92 (274)
                      +++++||...+++.|.+.|++|+-.+..-=..+++.+..+. ...+.-+++..
T Consensus        38 ass~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs   90 (296)
T 3k31_A           38 VANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVS   90 (296)
T ss_dssp             CCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTT
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCC
T ss_conf             99986499999999998699999996887999999999973797069966889


No 101
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid, csgid, Mg-bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} PDB: 3ieb_A*
Probab=33.09  E-value=8.7  Score=18.06  Aligned_cols=27  Identities=15%  Similarity=0.048  Sum_probs=16.0

Q ss_pred             CCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH
Q ss_conf             5989999999863413689988999625762289
Q gi|254780659|r  127 DDPFRTADKILATCPLKEQADVIVFDFHAETTSE  160 (274)
Q Consensus       127 d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSE  160 (274)
                      |-|...++.+.+.     .+|+  +-+|+++..+
T Consensus        70 Di~~~~~~~~~~~-----gad~--itvh~~~~~~   96 (218)
T 3jr2_A           70 DGGAILSRMAFEA-----GADW--ITVSAAAHIA   96 (218)
T ss_dssp             SCHHHHHHHHHHH-----TCSE--EEEETTSCHH
T ss_pred             CCCHHHHHHHHHH-----CCCE--EEEECCCCHH
T ss_conf             5727788998874-----4989--9995034547


No 102
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=32.81  E-value=24  Score=15.20  Aligned_cols=53  Identities=19%  Similarity=0.154  Sum_probs=36.5

Q ss_pred             EEEECCCCCCCCHHHHCC---CCEEEEECCCCC----------CCHH-HCCCCCHHHHHHHHHHCCC
Q ss_conf             998069762465456403---672898405601----------3712-1035474678988851688
Q gi|254780659|r  174 LVVGTHTHIPTADAQILD---GGTGYITDLGMC----------GDYN-SSIGLDKEEPINRFITQIP  226 (274)
Q Consensus       174 aVvGTHTHV~TaD~rILp---~GTayiTDvGMt----------G~~~-SVIG~~~~~~i~rf~t~~p  226 (274)
                      ..-|||.|..-.+.+.-.   ++.-|+.--||.          |++. -+|.-.-...|.++++...
T Consensus       241 l~wgthe~~~p~~~~~h~~G~~~~i~l~~pg~~t~vr~w~P~~g~~~g~li~H~Ea~Si~~~~tv~~  307 (480)
T 2ph5_A          241 IGWGTHEAHWPHDAYSHSNGPQCAIYLSRPSAGVMVRSWTPTLGAFHGFLITHAETISLTNFLTLKN  307 (480)
T ss_dssp             EECCTTCCCCCTTEECCSSSCTTEEEEEEEGGGCEEEECCTTTCSEEEECCCCSHHHHHHHHTCEES
T ss_pred             HHHHHCEEECCCCCCEEECCCCCCEEEECCCCEEEEEEECCCCCCEEEEEEECCCCEEHHHHCCCCC
T ss_conf             1010032303544520120787717980488334798778987734799972687045523122455


No 103
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=32.12  E-value=22  Score=15.52  Aligned_cols=37  Identities=16%  Similarity=0.384  Sum_probs=23.7

Q ss_pred             CEEEEEEECCCHH-H-HHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf             9269997202768-8-99999980898886099899991
Q gi|254780659|r    1 MRLLFLGDIVGKT-G-RSIVYEMLPRLIRDFQLDFVIAN   37 (274)
Q Consensus         1 MkiLfiGDIvG~~-G-r~~v~~~Lp~l~~~~~~DfvIaN   37 (274)
                      ||||++++-.-.+ | -+.+...+..|.+.|.+.++-.+
T Consensus         1 MKIl~i~~~~~~~~G~~~~~~~l~~~L~~~heV~v~~~~   39 (413)
T 3oy2_A            1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKAHEVIVFGIH   39 (413)
T ss_dssp             CEEEEEEECTTCCSHHHHHHHHHHHHHTTTSEEEEEEES
T ss_pred             CEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             948998899999883999999999998658989999757


No 104
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=31.83  E-value=25  Score=15.09  Aligned_cols=43  Identities=23%  Similarity=0.432  Sum_probs=23.6

Q ss_pred             HHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf             99998089888609989999170047886789999999983799899934
Q gi|254780659|r   17 IVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTG   66 (274)
Q Consensus        17 ~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~G   66 (274)
                      .+.+.++.+|+++.=-.|||  -|.     .|++.+++|.++|+|.|--|
T Consensus       147 ~~~~~i~~vk~~~~~~~VIa--GNV-----~T~e~~~~L~~aGAD~VkVG  189 (351)
T 2c6q_A          147 HFVEFVKDVRKRFPQHTIMA--GNV-----VTGEMVEELILSGADIIKVG  189 (351)
T ss_dssp             HHHHHHHHHHHHCTTSEEEE--EEE-----CSHHHHHHHHHTTCSEEEEC
T ss_pred             HHHHHHHHHHHHCCCCCEEE--EEE-----CCHHHHHHHHHCCCCEEEEE
T ss_conf             67778999998789874798--633-----12899999986678648971


No 105
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, structural genomics, PSI; 2.00A {Aquifex aeolicus VF5}
Probab=31.73  E-value=25  Score=15.08  Aligned_cols=34  Identities=18%  Similarity=0.082  Sum_probs=26.2

Q ss_pred             EEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHH
Q ss_conf             999917004788678999999998379989993426
Q gi|254780659|r   33 FVIANGENSAGGFGITEKIFCEMMETGIDVITTGNH   68 (274)
Q Consensus        33 fvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH   68 (274)
                      .+++-|  +++++||...+++.|.+.|.+|+-.+..
T Consensus        23 ~alVTG--ass~~GIG~aiA~~la~~Ga~V~i~~~~   56 (285)
T 2p91_A           23 RALITG--VANERSIAYGIAKSFHREGAQLAFTYAT   56 (285)
T ss_dssp             EEEECC--CSSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred             EEEEEC--CCCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             799989--9998679999999999869999998588


No 106
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} PDB: 3exs_A* 3ext_A
Probab=31.56  E-value=20  Score=15.72  Aligned_cols=17  Identities=24%  Similarity=0.362  Sum_probs=8.0

Q ss_pred             HHHHHHHCCCCEEEECHH
Q ss_conf             999998379989993426
Q gi|254780659|r   51 IFCEMMETGIDVITTGNH   68 (274)
Q Consensus        51 ~~~~l~~~GvDviT~GNH   68 (274)
                      .++++ ...+|++-.|-.
T Consensus        23 ~~~~~-~~~vd~ik~g~~   39 (221)
T 3exr_A           23 AAVSV-GNEVDVIEAGTV   39 (221)
T ss_dssp             HHHHH-GGGCSEEEECHH
T ss_pred             HHHHC-CCCCCEEECCEE
T ss_conf             99971-887439980545


No 107
>2pqp_A HD7A, histone deacetylase 7A; HDAC, structural genomics, structural genomics consortium, SGC; HET: TSN; 1.80A {Homo sapiens} PDB: 2pqo_A* 2nvr_A 3c0y_A 3c0z_A 3c10_A* 2vqm_A* 2vqj_A* 2vqw_G 2vqq_A* 2vqo_A* 2vqv_A*
Probab=31.40  E-value=25  Score=15.05  Aligned_cols=64  Identities=16%  Similarity=0.376  Sum_probs=29.3

Q ss_pred             CCHHHHHHHHHHHCCCCCCCCEEEEEC---CCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCC
Q ss_conf             598999999986341368998899962---5762289999997608957799806976246545640367289840560
Q gi|254780659|r  127 DDPFRTADKILATCPLKEQADVIVFDF---HAETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGM  202 (274)
Q Consensus       127 d~PF~~~d~~l~~~~~~~~~~~i~VDf---HaEaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGM  202 (274)
                      +|-=-++..++++..   -..+.+|||   |+.-|.|    .+|-|-+|-.+ -.|-|    |..-++-||++..++|-
T Consensus       201 NnvAiAa~~l~~~~~---~~rV~IvD~DvHHGnGTq~----if~~d~~V~~~-SiH~~----~~~~f~p~tG~~~e~G~  267 (421)
T 2pqp_A          201 NSVAIACRQLQQQSK---ASKILIVDWDVHHGNGTQQ----TFYQDPSVLYI-SLHRH----DDGNFFPGSGAVDEVGA  267 (421)
T ss_dssp             CHHHHHHHHHHHHST---TCCEEEEECSSSCCHHHHH----HHTTCTTEEEE-EEEEC----GGGTSTTCCCCTTCCCC
T ss_pred             CHHHHHHHHHHHHCC---CCEEEEEECCCCCCCCCCH----HHCCCCCCCCC-CCCCC----CCCCCCCCCCCHHHCCC
T ss_conf             759999999998478---8748999467788866021----21127850122-32346----77788998998887388


No 108
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=31.07  E-value=26  Score=15.01  Aligned_cols=17  Identities=6%  Similarity=0.241  Sum_probs=11.0

Q ss_pred             CHHHHHHHHHCCCCEEE
Q ss_conf             99999999837998999
Q gi|254780659|r   48 TEKIFCEMMETGIDVIT   64 (274)
Q Consensus        48 t~~~~~~l~~~GvDviT   64 (274)
                      ++.++..|.++|+|.+-
T Consensus       104 ~~~~~~~L~~~Gad~Vi  120 (413)
T 3l9w_A          104 DVDHYIRLRQAGVEKPE  120 (413)
T ss_dssp             SHHHHHHHHHTTCSSCE
T ss_pred             CHHHHHHHHHCCCCEEE
T ss_conf             99999999977989998


No 109
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=30.42  E-value=22  Score=15.48  Aligned_cols=14  Identities=7%  Similarity=0.036  Sum_probs=7.3

Q ss_pred             HHHHHHHHHHCCCC
Q ss_conf             46789888516886
Q gi|254780659|r  214 KEEPINRFITQIPR  227 (274)
Q Consensus       214 ~~~~i~rf~t~~p~  227 (274)
                      .++.+++.+...|.
T Consensus       196 i~~ai~~~~~~~~~  209 (298)
T 3gnn_A          196 VGEALDAAFALNAE  209 (298)
T ss_dssp             HHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHCCC
T ss_conf             78887767764368


No 110
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP binding; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=30.40  E-value=26  Score=14.94  Aligned_cols=75  Identities=20%  Similarity=0.348  Sum_probs=40.9

Q ss_pred             HHHHHHHHHCCCCEEEECCEE-CCCCCCCCHHHHHHHHHCCCCEE--------------------------EECHHHH-C
Q ss_conf             980898886099899991700-47886789999999983799899--------------------------9342653-0
Q gi|254780659|r   20 EMLPRLIRDFQLDFVIANGEN-SAGGFGITEKIFCEMMETGIDVI--------------------------TTGNHVW-D   71 (274)
Q Consensus        20 ~~Lp~l~~~~~~DfvIaNgEN-aa~G~Git~~~~~~l~~~GvDvi--------------------------T~GNH~w-d   71 (274)
                      +.|-++-+++++|+||+-.|+ .+.|      +++.|.+.|+.|+                          |.--+++ +
T Consensus        73 ~~i~~~~~~~~iD~vvvGpE~pL~~g------l~D~l~~~gi~v~Gp~~~aa~lE~sK~faK~~m~~~~IPta~~~~~~~  146 (451)
T 2yrx_A           73 EALVQFAKQQAIDLTIVGPEAPLASG------IVDRFMAEGLRIFGPSQRAALIEGSKAFAKELMKKYGIPTADHAAFTS  146 (451)
T ss_dssp             HHHHHHHHHTTCSEEEECSHHHHHTT------HHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCCBCCEEEESC
T ss_pred             HHHHHHHHHHCCCEEEECCCHHHHHH------HHHHHHHCCCCEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEC
T ss_conf             99999999839999998975788889------999995069940077899999875779899999972979878389978


Q ss_pred             CCCHHHHHHH--CCCEEEECCCCCCCCCCCEEEE
Q ss_conf             2220475421--8938975007988875407999
Q gi|254780659|r   72 KREALVFSQR--HCKFLRPANYPPNTPGNGSGLY  103 (274)
Q Consensus        72 ~kei~~~i~~--~~~ilRP~N~p~~~PG~G~~i~  103 (274)
                      ..|...++++  .|-+|+|.-   .+.|+|..+.
T Consensus       147 ~~ea~~~~~~~g~P~VIK~~g---lagGKGv~v~  177 (451)
T 2yrx_A          147 YEEAKAYIEQKGAPIVIKADG---LAAGKGVTVA  177 (451)
T ss_dssp             HHHHHHHHHHHCSSEEEEECC-------CCEEEE
T ss_pred             HHHHHHHHHHCCCCEEEECCC---CCCCCCCCCC
T ss_conf             999999986049966996164---5567873023


No 111
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=29.93  E-value=27  Score=14.89  Aligned_cols=16  Identities=25%  Similarity=0.501  Sum_probs=8.7

Q ss_pred             CCCCHHHHHHHHHHCC
Q ss_conf             3547467898885168
Q gi|254780659|r  210 IGLDKEEPINRFITQI  225 (274)
Q Consensus       210 IG~~~~~~i~rf~t~~  225 (274)
                      -|...+.+|++|+.+.
T Consensus        96 ~g~~v~eal~~~~~g~  111 (120)
T 2wfb_A           96 EGLTVRQAVQRFLDGQ  111 (120)
T ss_dssp             TTSBHHHHHHHHHTTC
T ss_pred             CCCCHHHHHHHHHHCC
T ss_conf             9996999999999588


No 112
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural genomics, joint center for structural genomics; 2.20A {Archaeoglobus fulgidus}
Probab=29.72  E-value=27  Score=14.87  Aligned_cols=107  Identities=14%  Similarity=0.166  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHCCCCEEEECHHHH--CCCCHHHHHHHCC-CEEEECCCCCCCCCCCEEEEEC----CCCCEEEEEEEEHH
Q ss_conf             899999999837998999342653--0222047542189-3897500798887540799984----89928999996000
Q gi|254780659|r   47 ITEKIFCEMMETGIDVITTGNHVW--DKREALVFSQRHC-KFLRPANYPPNTPGNGSGLYCA----KNGSNVLVANIMGR  119 (274)
Q Consensus        47 it~~~~~~l~~~GvDviT~GNH~w--d~kei~~~i~~~~-~ilRP~N~p~~~PG~G~~i~~~----~~g~ki~Vinl~Gr  119 (274)
                      -+.+.+.+.++.|++|+|.---.-  .-+|+...-++.. ++.--++--.+.|     ++.+    ..|.+|  ..+.|-
T Consensus        96 ~~~~~~~~AL~~G~hVVTANK~~la~~~~~l~~~a~~~~~~~~yEatV~~glP-----ii~~l~~~l~~~~i--~~i~Gi  168 (327)
T 3do5_A           96 EGVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLMYEATVGGAMP-----VVKLAKRYLALCEI--ESVKGI  168 (327)
T ss_dssp             CHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCCEECGGGSSTTSC-----CHHHHHTTTTTSCE--EEEEEE
T ss_pred             HHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC-----CHHHHHHHCCCCCC--CCHHHH
T ss_conf             27999999998489389428268776199999872202438998400354615-----46887743450141--011454


Q ss_pred             -------HC--CCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHH
Q ss_conf             -------05--883325989999999863413689988999625762289999
Q gi|254780659|r  120 -------VF--MNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQC  163 (274)
Q Consensus       120 -------~f--M~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A  163 (274)
                             .|  |.. -..||..+=+.-.+.-. .|.|-. -|.-+.-++-|..
T Consensus       169 lnGT~nyIl~~m~~-~~~~f~~al~eAq~~G~-aE~DP~-~Dl~G~D~a~Kl~  218 (327)
T 3do5_A          169 FNGTCNYILSRMEE-ERLPYEHILKEAQELGY-AEADPS-YDVEGIDAALKLV  218 (327)
T ss_dssp             CCHHHHHHHHHHHH-HCCCHHHHHHHHHHTTS-SCSSCH-HHHTSHHHHHHHH
T ss_pred             HCCHHHHHHHHHHH-CCCCHHHHHHHHHHHCC-CCCCCC-CCCCCHHHHHHHH
T ss_conf             15438999997873-38608999999998089-889998-4898876999999


No 113
>2zxr_A Single-stranded DNA specific exonuclease RECJ; DNA repair, hydrolase; 2.15A {Thermus thermophilus} PDB: 2zxo_A 2zxp_A 1ir6_A
Probab=29.39  E-value=27  Score=14.83  Aligned_cols=51  Identities=25%  Similarity=0.283  Sum_probs=23.6

Q ss_pred             EEEEEEE--CCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHH
Q ss_conf             2699972--027688999999808988860998999917004788678999999998
Q gi|254780659|r    2 RLLFLGD--IVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMM   56 (274)
Q Consensus         2 kiLfiGD--IvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~   56 (274)
                      ||+..||  +=|-++--.+.+.|..+    +.++...=-.-...|+|++....+++.
T Consensus        74 kI~I~GDYDvDGiTStaIL~~~L~~l----g~~v~~yIP~R~~eGYGl~~~~i~~~~  126 (666)
T 2zxr_A           74 RIRVHGDYDADGLTGTAILVRGLAAL----GADVHPFIPHRLEEGYGVLMERVPEHL  126 (666)
T ss_dssp             EEEEECCSSHHHHHHHHHHHHHHHHT----TCEEEECCC------------------
T ss_pred             EEEEEEECCCCHHHHHHHHHHHHHHC----CCCEEEECCCCCCCCCCCCHHHHHHHH
T ss_conf             89999746841689999999999988----996599888976568886999999986


No 114
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=28.98  E-value=23  Score=15.29  Aligned_cols=27  Identities=19%  Similarity=0.019  Sum_probs=23.3

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEECH
Q ss_conf             478867899999999837998999342
Q gi|254780659|r   41 SAGGFGITEKIFCEMMETGIDVITTGN   67 (274)
Q Consensus        41 aa~G~Git~~~~~~l~~~GvDviT~GN   67 (274)
                      +|+++||...+++.|.+.|.+|+=.+-
T Consensus        14 aag~~GIG~aiA~~la~~G~~V~i~~r   40 (275)
T 2pd4_A           14 VANNKSIAYGIAQSCFNQGATLAFTYL   40 (275)
T ss_dssp             CCSTTSHHHHHHHHHHTTTCEEEEEES
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEEC
T ss_conf             999848999999999987999999968


No 115
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline binding protein; PCE, hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=28.56  E-value=28  Score=14.74  Aligned_cols=20  Identities=5%  Similarity=-0.049  Sum_probs=9.0

Q ss_pred             CCHHHHHHHHHHHCCCEEEE
Q ss_conf             62289999997608957799
Q gi|254780659|r  156 ETTSEKQCFAHFVDSRASLV  175 (274)
Q Consensus       156 EaTSEK~A~g~~lDGrVsaV  175 (274)
                      |..+|...+....+.+|..+
T Consensus       205 ~~~~e~~ll~~~~~~~~DvL  224 (547)
T 2bib_A          205 DNVHGAEDKYGPLIGKVDLM  224 (547)
T ss_dssp             CSTTSHHHHHHHHHCCCSEE
T ss_pred             CHHHHHHHHHCCCCCCEEEE
T ss_conf             80567998646888854699


No 116
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=28.32  E-value=29  Score=14.71  Aligned_cols=54  Identities=7%  Similarity=-0.012  Sum_probs=30.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf             276889999998089888609989999170047886789999999983799899934
Q gi|254780659|r   10 VGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTG   66 (274)
Q Consensus        10 vG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~G   66 (274)
                      ...+-...+.+.+..--++++.++++.|+++...   --.+..+.|...|+|.|-.-
T Consensus        15 ~~~~f~~~~~~g~~~~a~~~G~~~~~~~~~~d~~---~q~~~i~~~i~~~vDgiIi~   68 (291)
T 3l49_A           15 TDHDWDLKAYQAQIAEIERLGGTAIALDAGRNDQ---TQVSQIQTLIAQKPDAIIEQ   68 (291)
T ss_dssp             CSSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHH---HHHHHHHHHHHHCCSEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHH---HHHHHHHHHHHCCCCEEEEC
T ss_conf             9988999999999999997499999993899999---99999999997499999977


No 117
>3ojf_A Enoyl-[acyl-carrier-protein] reductase (FABL) (Na; enoyl-ACP reductase, tetramer, rossmann fold, NAD(P) binding oxidoreductase; HET: IMJ NDP; 2.20A {Bacillus cereus} PDB: 2qio_A* 3oje_A
Probab=28.27  E-value=21  Score=15.64  Aligned_cols=27  Identities=22%  Similarity=0.101  Sum_probs=22.1

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEECH
Q ss_conf             478867899999999837998999342
Q gi|254780659|r   41 SAGGFGITEKIFCEMMETGIDVITTGN   67 (274)
Q Consensus        41 aa~G~Git~~~~~~l~~~GvDviT~GN   67 (274)
                      +++++||...++++|.+.|.+|+-.+.
T Consensus        14 as~~rGIG~aiA~~la~~Ga~V~i~~~   40 (257)
T 3ojf_A           14 VANQRSIAWGIARSLHNAGAKLIFTYA   40 (257)
T ss_dssp             CCSTTCHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEEC
T ss_conf             999866999999999987999999828


No 118
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii RH} PDB: 2o50_A 3nj8_A*
Probab=28.26  E-value=25  Score=15.08  Aligned_cols=28  Identities=18%  Similarity=0.050  Sum_probs=22.8

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEECHH
Q ss_conf             4788678999999998379989993426
Q gi|254780659|r   41 SAGGFGITEKIFCEMMETGIDVITTGNH   68 (274)
Q Consensus        41 aa~G~Git~~~~~~l~~~GvDviT~GNH   68 (274)
                      ||+..||...+++.|.+.|.+|+-.+..
T Consensus        17 Aags~GIG~aiA~~La~~Ga~V~i~~~~   44 (315)
T 2o2s_A           17 VADSHGYGWAIAKHLASAGARVALGTWP   44 (315)
T ss_dssp             CSSSSSHHHHHHHHHHTTTCEEEEEECH
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             9999779999999999879999998175


No 119
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=27.98  E-value=24  Score=15.21  Aligned_cols=77  Identities=14%  Similarity=0.172  Sum_probs=43.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHC-CC---CEEEECHHHH----------CCCC
Q ss_conf             02768899999980898886099899991700478867899999999837-99---8999342653----------0222
Q gi|254780659|r    9 IVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMET-GI---DVITTGNHVW----------DKRE   74 (274)
Q Consensus         9 IvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~-Gv---DviT~GNH~w----------d~ke   74 (274)
                      |+|.|.+...++.+.-| ++++++|.+.+--    -.++|.+-..++++. |.   +.|-.-..+|          +..|
T Consensus         5 iY~~~~Cst~rka~~~L-~~~~i~~~~~d~~----k~pls~~eL~~l~~~~~~~~~~lin~~~~~~k~l~~~~~~ls~~e   79 (132)
T 1z3e_A            5 LYTSPSCTSCRKARAWL-EEHEIPFVERNIF----SEPLSIDEIKQILRMTEDGTDEIISTRSKVFQKLNVNVESMPLQD   79 (132)
T ss_dssp             EEECTTCHHHHHHHHHH-HHTTCCEEEEETT----TSCCCHHHHHHHHHTCSSCGGGTBCTTSHHHHHHCCCGGGSBHHH
T ss_pred             EECCCCCHHHHHHHHHH-HHCCCCEEEEEHH----HCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCCCCCCCHHH
T ss_conf             98699987899999999-9769980772032----138999999999998299899999862788887588643499999


Q ss_pred             HHHHHHHCCCEE-EECC
Q ss_conf             047542189389-7500
Q gi|254780659|r   75 ALVFSQRHCKFL-RPAN   90 (274)
Q Consensus        75 i~~~i~~~~~il-RP~N   90 (274)
                      ++++|-++|.+| ||.=
T Consensus        80 ~~~ll~~~P~LikRPIi   96 (132)
T 1z3e_A           80 LYRLINEHPGLLRRPII   96 (132)
T ss_dssp             HHHHHHHCGGGBCSCEE
T ss_pred             HHHHHHHCHHHEECCEE
T ss_conf             99999858202618889


No 120
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, binary complex; HET: GDP; 2.40A {Mycobacterium smegmatis str} PDB: 2gej_A*
Probab=27.89  E-value=29  Score=14.66  Aligned_cols=35  Identities=17%  Similarity=0.160  Sum_probs=17.3

Q ss_pred             CEEEEEEEC-CCHH-HH-HHHHHHHHHHHHHCCCCEEEE
Q ss_conf             926999720-2768-89-999998089888609989999
Q gi|254780659|r    1 MRLLFLGDI-VGKT-GR-SIVYEMLPRLIRDFQLDFVIA   36 (274)
Q Consensus         1 MkiLfiGDI-vG~~-Gr-~~v~~~Lp~l~~~~~~DfvIa   36 (274)
                      |||+|+.+- +..+ |. +.+.+.-..|+++ +.+.+|.
T Consensus        21 MkI~iv~~~~~p~~GG~~~~i~~La~~L~~~-GheV~v~   58 (406)
T 2gek_A           21 MRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA-GHEVSVL   58 (406)
T ss_dssp             CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT-TCEEEEE
T ss_pred             CEEEEECCCCCCCCCHHHHHHHHHHHHHHHC-CCEEEEE
T ss_conf             8899989987899987999999999999977-9989999


No 121
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=27.86  E-value=29  Score=14.66  Aligned_cols=22  Identities=18%  Similarity=0.369  Sum_probs=19.8

Q ss_pred             CCCCHHHHHHHHHCCCCEEEEC
Q ss_conf             6789999999983799899934
Q gi|254780659|r   45 FGITEKIFCEMMETGIDVITTG   66 (274)
Q Consensus        45 ~Git~~~~~~l~~~GvDviT~G   66 (274)
                      .-.|.+..+.|-++|+|+|-.|
T Consensus        19 ~~~t~~~i~~l~e~GaDiIEiG   40 (240)
T 1viz_A           19 KDLPDEQLEILCESGTDAVIIG   40 (240)
T ss_dssp             SCCCHHHHHHHHTSCCSEEEEC
T ss_pred             CCCHHHHHHHHHHCCCCEEEEC
T ss_conf             9857999999997499999987


No 122
>1zz1_A Histone deacetylase-like amidohydrolase; HET: SHH; 1.57A {Alcaligenaceae bacterium FB188} PDB: 1zz0_A* 1zz3_A* 2gh6_A* 2vcg_A*
Probab=27.83  E-value=29  Score=14.66  Aligned_cols=11  Identities=27%  Similarity=0.305  Sum_probs=5.8

Q ss_pred             HCCCEEEEEEC
Q ss_conf             08957799806
Q gi|254780659|r  168 VDSRASLVVGT  178 (274)
Q Consensus       168 lDGrVsaVvGT  178 (274)
                      .+||+-.|+|=
T Consensus       300 ~~~~vv~vleG  310 (369)
T 1zz1_A          300 CDGRIVFVQEG  310 (369)
T ss_dssp             STTCEEEEECC
T ss_pred             CCCCEEEEECC
T ss_conf             79988999667


No 123
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor}
Probab=27.58  E-value=30  Score=14.63  Aligned_cols=46  Identities=22%  Similarity=0.284  Sum_probs=20.0

Q ss_pred             HHHHHHHHHHHCCCCEEE--ECCEECCCCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf             999808988860998999--9170047886789999999983799899934
Q gi|254780659|r   18 VYEMLPRLIRDFQLDFVI--ANGENSAGGFGITEKIFCEMMETGIDVITTG   66 (274)
Q Consensus        18 v~~~Lp~l~~~~~~DfvI--aNgENaa~G~Git~~~~~~l~~~GvDviT~G   66 (274)
                      +++.+.++|++-+.-||-  ..|-   -..-.|.+..+.|.+.|+|+|-.|
T Consensus         7 i~~~f~~~k~~~~~ali~yltaG~---P~~e~s~~~l~~l~~~G~D~iEiG   54 (271)
T 3nav_A            7 YQALFQRLSAAQQGAFVPFVTIGD---PNPEQSLAIMQTLIDAGADALELG   54 (271)
T ss_dssp             HHHHHHHHHHTTBCEEEEEEETTS---SCHHHHHHHHHHHHHTTCSSEEEE
T ss_pred             HHHHHHHHHHCCCCEEEEEEECCC---CCHHHHHHHHHHHHHCCCCEEEEC
T ss_conf             999999999749936998983718---987899999999997699999978


No 124
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens}
Probab=27.45  E-value=30  Score=14.62  Aligned_cols=40  Identities=18%  Similarity=0.151  Sum_probs=19.4

Q ss_pred             CCEEEEEECCCCCCCCHHHHC------CCCEEEEECCCCCCCHHHCCCCCHH
Q ss_conf             957799806976246545640------3672898405601371210354746
Q gi|254780659|r  170 SRASLVVGTHTHIPTADAQIL------DGGTGYITDLGMCGDYNSSIGLDKE  215 (274)
Q Consensus       170 GrVsaVvGTHTHV~TaD~rIL------p~GTayiTDvGMtG~~~SVIG~~~~  215 (274)
                      +.-..+++|--+.|-.  |.|      -||-    +.-..|-+|+|+..+..
T Consensus       131 ~~~~~i~~TRKt~Pg~--r~l~k~Av~~GGg----~~HR~~L~d~vlikdnH  176 (299)
T 2jbm_A          131 GWTGHVAGTRKTTPGF--RLVEKYGLLVGGA----ASHRYDLGGLVMVKDNH  176 (299)
T ss_dssp             TCCSEEECCSCCCTTC--HHHHHHHHHHTTC----BCCCCSTTSSEEECHHH
T ss_pred             CCCEEEEECCCCCCCH--HHHHHHHHHHCCC----CCEECCCCCCCCCCCCH
T ss_conf             9805998655135362--8999999986387----52431576433014217


No 125
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159}
Probab=25.89  E-value=25  Score=15.04  Aligned_cols=76  Identities=14%  Similarity=0.178  Sum_probs=55.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHH-CCCC---EEEECHHHH------------CC
Q ss_conf             0276889999998089888609989999170047886789999999983-7998---999342653------------02
Q gi|254780659|r    9 IVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMME-TGID---VITTGNHVW------------DK   72 (274)
Q Consensus         9 IvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~-~GvD---viT~GNH~w------------d~   72 (274)
                      |+|.|++...++.+.-|+ +++++|.+.+--.    .++|.+...++++ .|.+   +|-.-..+|            +.
T Consensus         7 iy~~~~Cst~rka~~~L~-~~gi~~~~~d~~~----~p~s~~eL~~ll~~~g~~~~~li~~~~~~~k~l~l~~~~~~ls~   81 (120)
T 3fz4_A            7 FYEYPKCSTCRRAKAELD-DLAWDYDAIDIKK----NPPAASLIRNWLENSGLELKKFFNTSGQSYRALGLKDKLHQLSL   81 (120)
T ss_dssp             EEECSSCHHHHHHHHHHH-HHTCCEEEEETTT----SCCCHHHHHHHHHHSCCCGGGGBCTTSHHHHHTTHHHHGGGCCH
T ss_pred             EECCCCCHHHHHHHHHHH-HCCCCCEEEEECC----CCCCHHHHHHHHHHCCCCHHHHHHCCCHHHHHCCHHHCCCCCCH
T ss_conf             877999878999999999-6799858985003----69699999999998497699987603307887370101200599


Q ss_pred             CCHHHHHHHCCCEE-EEC
Q ss_conf             22047542189389-750
Q gi|254780659|r   73 REALVFSQRHCKFL-RPA   89 (274)
Q Consensus        73 kei~~~i~~~~~il-RP~   89 (274)
                      .|++++|-++|.|+ ||.
T Consensus        82 ~e~i~ll~~~P~LikRPI   99 (120)
T 3fz4_A           82 DEAANLLASDGMLIKRPL   99 (120)
T ss_dssp             HHHHHHHHHCGGGBCSCE
T ss_pred             HHHHHHHHHCHHHEECCE
T ss_conf             999999995904324767


No 126
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=24.90  E-value=33  Score=14.32  Aligned_cols=47  Identities=19%  Similarity=0.314  Sum_probs=30.4

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHC-CCCEE
Q ss_conf             9269997202768899999980898886099899991700478867899999999837-99899
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMET-GIDVI   63 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~-GvDvi   63 (274)
                      |||+.+|  .|+-|+...+...     +.+.+++++--         .++.++++.+. ++.++
T Consensus         5 m~ViI~G--~G~~G~~la~~L~-----~~g~~v~vId~---------d~~~~~~~~~~~~~~vi   52 (140)
T 1lss_A            5 MYIIIAG--IGRVGYTLAKSLS-----EKGHDIVLIDI---------DKDICKKASAEIDALVI   52 (140)
T ss_dssp             CEEEEEC--CSHHHHHHHHHHH-----HTTCEEEEEES---------CHHHHHHHHHHCSSEEE
T ss_pred             CEEEEEC--CCHHHHHHHHHHH-----HCCCCEEEEEE---------CHHHHHHHHHCCCCEEE
T ss_conf             9999999--8999999999999-----77995899850---------15665544531474599


No 127
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A substrate tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=24.77  E-value=33  Score=14.30  Aligned_cols=23  Identities=17%  Similarity=0.508  Sum_probs=14.6

Q ss_pred             EEEEECCCCCHHHH--HHHHHHHCC
Q ss_conf             89996257622899--999976089
Q gi|254780659|r  148 VIVFDFHAETTSEK--QCFAHFVDS  170 (274)
Q Consensus       148 ~i~VDfHaEaTSEK--~A~g~~lDG  170 (274)
                      +.=+-||-|-+++.  .-+-.|+.-
T Consensus       190 I~GvQFHPEkS~~~G~~ll~nFlk~  214 (555)
T 1jvn_A          190 IFATQFHPEKSGKAGLNVIENFLKQ  214 (555)
T ss_dssp             EEEESSBGGGSHHHHHHHHHHHHTT
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHHC
T ss_conf             9999899983167799999999826


No 128
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 function project, S2F, structural genomics, unknown functio; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=24.43  E-value=34  Score=14.26  Aligned_cols=22  Identities=9%  Similarity=0.083  Sum_probs=9.8

Q ss_pred             HHHHHHHHHCCCCEEEECHHHHC
Q ss_conf             99999998379989993426530
Q gi|254780659|r   49 EKIFCEMMETGIDVITTGNHVWD   71 (274)
Q Consensus        49 ~~~~~~l~~~GvDviT~GNH~wd   71 (274)
                      ......|++.++.++..--+ ||
T Consensus        80 ~~~i~~l~k~~i~vy~~Ht~-~D  101 (247)
T 1nmo_A           80 RNRLKTLLANDINLYGWHLP-LD  101 (247)
T ss_dssp             HHHHHHHHHTTCEEEECCHH-HH
T ss_pred             HHHHHHHHHCCCCEEEECCC-HH
T ss_conf             89999999789727983476-44


No 129
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=24.40  E-value=34  Score=14.26  Aligned_cols=13  Identities=8%  Similarity=0.087  Sum_probs=5.4

Q ss_pred             HHHHHHCCCCEEE
Q ss_conf             9999837998999
Q gi|254780659|r   52 FCEMMETGIDVIT   64 (274)
Q Consensus        52 ~~~l~~~GvDviT   64 (274)
                      ++--.+.|+-..+
T Consensus        81 A~aa~~~g~~~~~   93 (332)
T 1vcf_A           81 AEAAEALGVGMML   93 (332)
T ss_dssp             HHHHHHHTCEEEE
T ss_pred             HHHHHHCCCCEEE
T ss_conf             9999975987787


No 130
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=24.32  E-value=34  Score=14.25  Aligned_cols=62  Identities=5%  Similarity=0.069  Sum_probs=36.0

Q ss_pred             EEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHC
Q ss_conf             2699972027688999999808988860998999917004788678999999998379989993426530
Q gi|254780659|r    2 RLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWD   71 (274)
Q Consensus         2 kiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd   71 (274)
                      .|++.|.-........+...+..+++ ..+...+..       .-++++.++.|.++|+|.++.|-.+++
T Consensus       103 ~i~l~~g~~~~~~~~~~~~~i~~i~~-~~~~i~~~~-------g~~~~e~l~~L~~aG~~~~~~~~et~~  164 (348)
T 3iix_A          103 TIVLQSGEDPYXMPDVISDIVKEIKK-MGVAVTLSL-------GEWPREYYEKWKEAGADRYLLRHETAN  164 (348)
T ss_dssp             EEEEEESCCGGGTTHHHHHHHHHHHT-TSCEEEEEC-------CCCCHHHHHHHHHHTCCEEECCCBCSC
T ss_pred             EEEEECCCCCCCCHHHHHHHHHHCCC-CCEEEEECC-------CCCHHHHHHHHHHHCCCEEEECHHHCC
T ss_conf             89982588876648999999874033-321232024-------543089999999828967985634434


No 131
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) precursor; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=24.32  E-value=33  Score=14.29  Aligned_cols=28  Identities=11%  Similarity=0.066  Sum_probs=23.1

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEECHH
Q ss_conf             4788678999999998379989993426
Q gi|254780659|r   41 SAGGFGITEKIFCEMMETGIDVITTGNH   68 (274)
Q Consensus        41 aa~G~Git~~~~~~l~~~GvDviT~GNH   68 (274)
                      +++.+||...+++.|.+.|.+|+-.+..
T Consensus        16 as~~~GIG~aiA~~la~~Ga~V~i~~~~   43 (297)
T 1d7o_A           16 IADDNGYGWAVAKSLAAAGAEILVGTWV   43 (297)
T ss_dssp             CSSSSSHHHHHHHHHHHTTCEEEEEEEH
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             8999639999999999879989998276


No 132
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A*
Probab=24.14  E-value=33  Score=14.34  Aligned_cols=28  Identities=21%  Similarity=0.171  Sum_probs=23.5

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEECHH
Q ss_conf             4788678999999998379989993426
Q gi|254780659|r   41 SAGGFGITEKIFCEMMETGIDVITTGNH   68 (274)
Q Consensus        41 aa~G~Git~~~~~~l~~~GvDviT~GNH   68 (274)
                      +++|.||...+++.|.+.|.+|+-.+..
T Consensus        17 ass~~GIG~aia~~la~~Ga~V~i~~r~   44 (265)
T 1qsg_A           17 VASKLSIAYGIAQAMHREGAELAFTYQN   44 (265)
T ss_dssp             CCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             9985018999999999869999999588


No 133
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=23.86  E-value=30  Score=14.59  Aligned_cols=78  Identities=17%  Similarity=0.281  Sum_probs=41.7

Q ss_pred             HHHHHHHHHCCCCEEEECCEEC-CCC------------CCCCHHHHH---------H-HHHCCCCEEEECHHHH-CCCCH
Q ss_conf             9808988860998999917004-788------------678999999---------9-9837998999342653-02220
Q gi|254780659|r   20 EMLPRLIRDFQLDFVIANGENS-AGG------------FGITEKIFC---------E-MMETGIDVITTGNHVW-DKREA   75 (274)
Q Consensus        20 ~~Lp~l~~~~~~DfvIaNgENa-a~G------------~Git~~~~~---------~-l~~~GvDviT~GNH~w-d~kei   75 (274)
                      +.|-.+-+++++|+||+--|.- +.|            ||.|++.++         + +.++||-  |.=-+.+ +..|.
T Consensus        57 ~~i~~~~~~~~idlvivgpe~pL~~Gl~D~l~~~gi~vfGP~~~aA~lE~sK~fak~~m~~~~IP--ta~~~~~~~~~~a  134 (431)
T 3mjf_A           57 AGLLAFAQSHDIGLTIVGPEAPLVIGVVDAFRAAGLAIFGPTQAAAQLEGSKAFTKDFLARHNIP--SAEYQNFTDVEAA  134 (431)
T ss_dssp             HHHHHHHHHTTEEEEEECSHHHHHTTHHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCS--BCCEEEESCHHHH
T ss_pred             HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCC--CCCEEEECCHHHH
T ss_conf             99999999829998998974898877999997479933387788878776199999998752658--8746995899999


Q ss_pred             HHHHHHC--CCEEEECCCCCCCCCCCEEE
Q ss_conf             4754218--93897500798887540799
Q gi|254780659|r   76 LVFSQRH--CKFLRPANYPPNTPGNGSGL  102 (274)
Q Consensus        76 ~~~i~~~--~~ilRP~N~p~~~PG~G~~i  102 (274)
                      ..|+++.  |-+++|.-.   +.|+|..+
T Consensus       135 ~~~~~~~~~p~VIK~dgl---a~GKGV~v  160 (431)
T 3mjf_A          135 LAYVRQKGAPIVIKADGL---AAGKGVIV  160 (431)
T ss_dssp             HHHHHHHCSSEEEEESSS---CTTCSEEE
T ss_pred             HHHHHCCCCCEEEEECCC---CCCCCCEE
T ss_conf             987525698779971666---78776267


No 134
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=23.59  E-value=32  Score=14.42  Aligned_cols=62  Identities=15%  Similarity=0.187  Sum_probs=40.1

Q ss_pred             HHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHCCCEEEEC
Q ss_conf             99808988860998999917004788678999999998379989993426530222047542189389750
Q gi|254780659|r   19 YEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQRHCKFLRPA   89 (274)
Q Consensus        19 ~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~~~ilRP~   89 (274)
                      .+.+.+|+++|..+++|.      -|-=++.+.+++..++|+|.+-+=+  ++ +|+..+-.+..-..=|-
T Consensus        46 ~~~i~~l~~~~~~~~~vG------aGTV~~~~~~~~a~~aGA~FivsP~--~~-~~v~~~a~~~~i~~iPG  107 (212)
T 2v82_A           46 EQSIPAIVDAYGDKALIG------AGTVLKPEQVDALARMGCQLIVTPN--IH-SEVIRRAVGYGMTVCPG  107 (212)
T ss_dssp             HHHHHHHHHHHTTTSEEE------EECCCSHHHHHHHHHTTCCEEECSS--CC-HHHHHHHHHTTCEEECE
T ss_pred             HHHHHHHHHHCCCCCEEE------EECCCCHHHHHHHHHCCCCEEECCC--CC-HHHHHHHHHCCCCCCCC
T ss_conf             999999999668750785------3022247889999854897898998--99-89999999758763388


No 135
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleotide and nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=22.76  E-value=36  Score=14.05  Aligned_cols=19  Identities=26%  Similarity=0.403  Sum_probs=9.1

Q ss_pred             CHHHHHHHHHCCCCEEEEC
Q ss_conf             9999999983799899934
Q gi|254780659|r   48 TEKIFCEMMETGIDVITTG   66 (274)
Q Consensus        48 t~~~~~~l~~~GvDviT~G   66 (274)
                      |++.+++|.++|+|.|--|
T Consensus       159 T~e~a~~L~~aGAD~VkVG  177 (336)
T 1ypf_A          159 TPEAVRELENAGADATKVG  177 (336)
T ss_dssp             SHHHHHHHHHHTCSEEEEC
T ss_pred             CHHHHHHHHHHCCCEEEEC
T ss_conf             7899999998398589962


No 136
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=22.67  E-value=36  Score=14.04  Aligned_cols=47  Identities=17%  Similarity=0.196  Sum_probs=31.6

Q ss_pred             EEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHCC
Q ss_conf             999917004788678999999998379989993426530222047542189
Q gi|254780659|r   33 FVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQRHC   83 (274)
Q Consensus        33 fvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~~   83 (274)
                      .+++-|    ++.||...++++|.+.|.+|+-.+...=.-++..+.+....
T Consensus        31 valVTG----as~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g   77 (276)
T 2b4q_A           31 IALVTG----GSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG   77 (276)
T ss_dssp             EEEEET----TTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS
T ss_pred             EEEEEC----CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCC
T ss_conf             799928----88789999999999869989999798899999999975049


No 137
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=22.66  E-value=22  Score=15.45  Aligned_cols=12  Identities=25%  Similarity=0.448  Sum_probs=6.0

Q ss_pred             EEEECCCCCCCC
Q ss_conf             998069762465
Q gi|254780659|r  174 LVVGTHTHIPTA  185 (274)
Q Consensus       174 aVvGTHTHV~Ta  185 (274)
                      .+++|--..|-.
T Consensus       137 ~i~~TRKt~Pg~  148 (294)
T 3c2e_A          137 TIAGTRKTTPGL  148 (294)
T ss_dssp             EEECCSCCCTTC
T ss_pred             EEEECCCCCCCC
T ss_conf             797347667674


No 138
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=22.40  E-value=37  Score=14.01  Aligned_cols=145  Identities=12%  Similarity=0.109  Sum_probs=75.8

Q ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCC-CCEEEECHHHHCCCCHHHHHHHCCCEEEECCCC
Q ss_conf             8999999808988860998999917004788678999999998379-989993426530222047542189389750079
Q gi|254780659|r   14 GRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETG-IDVITTGNHVWDKREALVFSQRHCKFLRPANYP   92 (274)
Q Consensus        14 Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~G-vDviT~GNH~wd~kei~~~i~~~~~ilRP~N~p   92 (274)
                      =++.+.+-|.+|+..| +|+.....-+....... -+..++|++.| |..|-..||..++-+...-....+.+.-..|+.
T Consensus        93 ~~~~~~~SL~rL~~d~-iDl~~lH~~~~~~~~e~-~~al~~l~~~Gkir~iG~S~~~~~~l~~~~~~~~~~~~~~~~~~~  170 (281)
T 1vbj_A           93 TLSAFEKSIKKLGLEY-VDLYLIHWPGKDKFIDT-WKAFEKLYADKKVRAIGVSNFHEHHIEELLKHCKVAPMVNQIELH  170 (281)
T ss_dssp             HHHHHHHHHHHHTCSC-BSEEEESCCCSSCHHHH-HHHHHHHHHTTSBSCEEEESCCHHHHHHHHTSCSSCCSEEEEECB
T ss_pred             HHHHHHHHHHHHCCCC-EEEEEECCCCCCCCHHH-HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC
T ss_conf             9999999999829990-60576336742322689-999999998799647975687699999998731567520256504


Q ss_pred             CCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCE
Q ss_conf             88875407999848992899999600005883325989999999863413689988999625762289999997608957
Q gi|254780659|r   93 PNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCFAHFVDSRA  172 (274)
Q Consensus        93 ~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A~g~~lDGrV  172 (274)
                      ...+-....-+..++|..+....-+++-+..   +.+  ....+-+++              . .|.--.|++|-+.--+
T Consensus       171 ~~~~~~~~~~~~~~~gi~v~a~~pl~~~~~~---~~~--~l~~ia~~~--------------~-~~~aqlal~~~l~~~~  230 (281)
T 1vbj_A          171 PLLNQKALCEYCKSKNIAVTAWSPLGQGHLV---EDA--RLKAIGGKY--------------G-KTAAQVMLRWEIQAGV  230 (281)
T ss_dssp             TTBCCHHHHHHHHHTTCEEEEESTTGGGTTT---TCH--HHHHHHHTT--------------T-CCHHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHHHCCEEEEEECCCCCCCCC---CCH--HHHHHHHHH--------------C-CCHHHHHHHHHHHCCC
T ss_conf             5221689988999779179994605677753---106--888999885--------------9-8699999999873995


Q ss_pred             EEEEECCC
Q ss_conf             79980697
Q gi|254780659|r  173 SLVVGTHT  180 (274)
Q Consensus       173 saVvGTHT  180 (274)
                      +.++|+-+
T Consensus       231 vvI~G~~~  238 (281)
T 1vbj_A          231 ITIPKSGN  238 (281)
T ss_dssp             EECCBCSC
T ss_pred             EEEECCCC
T ss_conf             89989999


No 139
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae TIGR4} SCOP: d.159.1.7
Probab=22.34  E-value=37  Score=14.00  Aligned_cols=58  Identities=24%  Similarity=0.363  Sum_probs=37.9

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHC
Q ss_conf             92699972027688999999808988860998999917004788678999999998379989993426530
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWD   71 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd   71 (274)
                      |||+.|.|+=|.  ..++++.|..+++  ++|.||.-|.....  ...+      ...++- .-.|||=|+
T Consensus         7 ~kI~viSD~Hgn--~~al~~vl~~~~~--~~D~iih~GD~~~~--~~~~------~~~~~~-~V~GN~D~~   64 (176)
T 3ck2_A            7 QTIIVMSDSHGD--SLIVEEVRDRYVG--KVDAVFHNGDSELR--PDSP------LWEGIR-VVKGNMDFY   64 (176)
T ss_dssp             EEEEEECCCTTC--HHHHHHHHHHHTT--TSSEEEECSCCCSC--TTCG------GGTTEE-ECCCTTCCS
T ss_pred             CEEEEEECCCCC--HHHHHHHHHHHHC--CCCEEEECCCCCCC--CHHH------HHCCCE-EEECCCCCC
T ss_conf             899999006899--8999999999777--99999989987751--2336------647998-973897952


No 140
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=22.26  E-value=22  Score=15.42  Aligned_cols=94  Identities=17%  Similarity=0.125  Sum_probs=46.9

Q ss_pred             CCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHCCC--EEEECCCCCCCCCCCEEEE----ECCCCCEEEEEEE
Q ss_conf             886789999999983799899934265302220475421893--8975007988875407999----8489928999996
Q gi|254780659|r   43 GGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQRHCK--FLRPANYPPNTPGNGSGLY----CAKNGSNVLVANI  116 (274)
Q Consensus        43 ~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~~~--ilRP~N~p~~~PG~G~~i~----~~~~g~ki~Vinl  116 (274)
                      ++.||...++++|.+.|.+|+-.+-..=.-++....+.+...  ..-+++...  +..=-..+    ..-++.--.++|-
T Consensus        17 as~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~~idilvnn   94 (260)
T 2ae2_A           17 GSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS--RSERQELMNTVANHFHGKLNILVNN   94 (260)
T ss_dssp             CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHTTTCCCEEEEC
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCC--HHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf             88889999999999869999999698899999999987249828999877899--9999999999999849995399989


Q ss_pred             EHHHCCCCCCCCHHHHHHHHHH
Q ss_conf             0000588332598999999986
Q gi|254780659|r  117 MGRVFMNPLLDDPFRTADKILA  138 (274)
Q Consensus       117 ~Gr~fM~~~~d~PF~~~d~~l~  138 (274)
                      -|.....+..|.+.+..+++++
T Consensus        95 AG~~~~~~~~~~~~e~~~~~~~  116 (260)
T 2ae2_A           95 AGIVIYKEAKDYTVEDYSLIMS  116 (260)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCHHHHHHHHH
T ss_conf             9878888756699999999999


No 141
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=21.88  E-value=38  Score=13.94  Aligned_cols=78  Identities=18%  Similarity=0.250  Sum_probs=42.5

Q ss_pred             HHHHHHHHCCCCEEEECCEEC-CC------------CCCCCHHHHH----------HHHHCCCCEEEECHHH-HCCCCHH
Q ss_conf             808988860998999917004-78------------8678999999----------9983799899934265-3022204
Q gi|254780659|r   21 MLPRLIRDFQLDFVIANGENS-AG------------GFGITEKIFC----------EMMETGIDVITTGNHV-WDKREAL   76 (274)
Q Consensus        21 ~Lp~l~~~~~~DfvIaNgENa-a~------------G~Git~~~~~----------~l~~~GvDviT~GNH~-wd~kei~   76 (274)
                      .|-++-++++|||||+--|.- +.            =||.+++.++          -+.++|+-  |.--.. .+..|..
T Consensus        74 ~l~~~~~~~~iDlvvvGpE~pL~~Gi~D~l~~~gi~vfGps~~~A~lE~sK~f~k~~m~~~~IP--ta~~~~~~~~~ea~  151 (442)
T 3lp8_A           74 EVIQVCKKEKIELVVIGPETPLMNGLSDALTEEGILVFGPSKAAARLESSKGFTKELCMRYGIP--TAKYGYFVDTNSAY  151 (442)
T ss_dssp             HHHHHHHHTTCCEEEECSHHHHHTTHHHHHHHTTCEEESCCHHHHHHHHCHHHHHHHHHHHTCC--BCCEEEESSHHHHH
T ss_pred             HHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCHHHHHHHHHHHCCC--CCCHHHCCCHHHHH
T ss_conf             9999999829999998983898878899997489947864788988753689999999986888--75100138899999


Q ss_pred             HHHHHC--CCEEEECCCCCCCCCCCEEEE
Q ss_conf             754218--938975007988875407999
Q gi|254780659|r   77 VFSQRH--CKFLRPANYPPNTPGNGSGLY  103 (274)
Q Consensus        77 ~~i~~~--~~ilRP~N~p~~~PG~G~~i~  103 (274)
                      .++++.  |-+|+|.-   .+.|+|..+.
T Consensus       152 ~~~~~~~~P~VIK~dg---la~GKGV~i~  177 (442)
T 3lp8_A          152 KFIDKHKLPLVVKADG---LAQGKGTVIC  177 (442)
T ss_dssp             HHHHHSCSSEEEEESS---CCTTTSEEEE
T ss_pred             HHHHHCCCCEEEECCC---CCCCCEEEEE
T ss_conf             9986079978997476---6789759997


No 142
>3lwt_X Phosphoinositide phosphatase SAC1; SAC3/FIG4, lipid metabol endoplasmic reticulum, hydrolase, membrane, transmembrane; 1.96A {Saccharomyces cerevisiae}
Probab=21.62  E-value=38  Score=13.91  Aligned_cols=45  Identities=11%  Similarity=0.045  Sum_probs=24.7

Q ss_pred             CHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHH
Q ss_conf             7688999999808988860998999917004788678999999998
Q gi|254780659|r   11 GKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMM   56 (274)
Q Consensus        11 G~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~   56 (274)
                      .++-..+..+|...|+++|+ +.+|+|==+..+.-+.-.+.|++..
T Consensus       279 ~~~~~~a~~~HF~~L~~~YG-~~~iVNLl~~k~~E~~L~~~y~~~v  323 (505)
T 3lwt_X          279 GENSLDATKKHFDQQKELYG-DNYLVNLVNQKGHELPVKEGYESVV  323 (505)
T ss_dssp             CHHHHHHHHHHHHHHHHHHS-EEEEEEECCCSSCCCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHC-CCEEEECCCCCCCCHHHHHHHHHHH
T ss_conf             77628999999999998729-8338982025886217789999999


No 143
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B}
Probab=21.51  E-value=38  Score=13.89  Aligned_cols=27  Identities=15%  Similarity=-0.047  Sum_probs=22.3

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEECH
Q ss_conf             478867899999999837998999342
Q gi|254780659|r   41 SAGGFGITEKIFCEMMETGIDVITTGN   67 (274)
Q Consensus        41 aa~G~Git~~~~~~l~~~GvDviT~GN   67 (274)
                      ++++.||...+++.|.+.|.+|+-..-
T Consensus        22 aa~s~GIG~aiA~~la~~Ga~V~~~~~   48 (271)
T 3ek2_A           22 LLSNRSIAYGIAKACKREGAELAFTYV   48 (271)
T ss_dssp             CCSTTSHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEEC
T ss_conf             987608999999999986999999958


No 144
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A
Probab=21.48  E-value=34  Score=14.23  Aligned_cols=32  Identities=25%  Similarity=0.267  Sum_probs=24.8

Q ss_pred             EEEECCEECCCCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf             9999170047886789999999983799899934
Q gi|254780659|r   33 FVIANGENSAGGFGITEKIFCEMMETGIDVITTG   66 (274)
Q Consensus        33 fvIaNgENaa~G~Git~~~~~~l~~~GvDviT~G   66 (274)
                      .+++-|  |++..||...+++.|.+.|.+|+-.+
T Consensus        22 valVTG--AsG~~GIG~aia~~la~~Ga~V~i~~   53 (267)
T 3gdg_A           22 VVVVTG--ASGPKGMGIEAARGCAEMGAAVAITY   53 (267)
T ss_dssp             EEEETT--CCSSSSHHHHHHHHHHHTSCEEEECB
T ss_pred             EEEEEC--CCCCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf             899959--89997089999999998699899984


No 145
>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans}
Probab=21.36  E-value=39  Score=13.88  Aligned_cols=25  Identities=16%  Similarity=0.417  Sum_probs=17.6

Q ss_pred             CCCHHHHHHHHHCCCCEEEECHHHH
Q ss_conf             7899999999837998999342653
Q gi|254780659|r   46 GITEKIFCEMMETGIDVITTGNHVW   70 (274)
Q Consensus        46 Git~~~~~~l~~~GvDviT~GNH~w   70 (274)
                      -+..++.+...++|+|+||.|+-.|
T Consensus        43 ~~~~~~~~~Q~~aGld~It~GdFs~   67 (755)
T 2nq5_A           43 ELRLDFLKKQLNAGLDLIPVGDFSL   67 (755)
T ss_dssp             HHHHHHHHHHHHTTCSBEEESCCCS
T ss_pred             HHHHHHHHHHHHCCCCEECCCCCCC
T ss_conf             9999999999985989616898031


No 146
>2pkf_A Adenosine kinase; transferase, structural genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=21.33  E-value=18  Score=16.00  Aligned_cols=145  Identities=11%  Similarity=0.111  Sum_probs=63.3

Q ss_pred             CEEEEEEECCCH-----HHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCH
Q ss_conf             926999720276-----889999998089888609989999170047886789999999983799899934265302220
Q gi|254780659|r    1 MRLLFLGDIVGK-----TGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREA   75 (274)
Q Consensus         1 MkiLfiGDIvG~-----~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei   75 (274)
                      |||+.+|++.=.     +++ .....+|.-..+....|.+-.-+-..||.+.  .++..|-..|.++--.|---=|..+.
T Consensus        11 m~i~v~G~~~~D~i~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~GG~a~--NvA~~l~~LG~~v~~~~~vG~D~~~~   87 (334)
T 2pkf_A           11 MTIAVTGSIATDHLMRFPGR-FSEQLLPEHLHKVSLSFLVDDLVMHRGGVAG--NMAFAIGVLGGEVALVGAAGADFADY   87 (334)
T ss_dssp             SEEEEESCCEEEEEEECSSC-THHHHTTSCGGGCCCCCCCSEEEEEEECHHH--HHHHHHHHTTCEEEEECEECGGGHHH
T ss_pred             CEEEEECCCEEEEEEECCCC-CHHCCCCCCCCCCCCEEECCCEEEECCCHHH--HHHHHHHHCCCCEEEEEEECCCHHHH
T ss_conf             87999885631477703784-1110375435657642764741562595799--99999998799879999957888999


Q ss_pred             HHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCC
Q ss_conf             47542189389750079888754079998489928999996000058833259899999998634136899889996257
Q gi|254780659|r   76 LVFSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHA  155 (274)
Q Consensus        76 ~~~i~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHa  155 (274)
                      ...+++..==++..-..+..+-.-+.++...+|.+..... -|...- . ....+.   .+.+.+   ...+..+++-+.
T Consensus        88 ~~~L~~~gv~~~~~~~~~~~~t~~~~~~~~~~g~~~~~~~-~~~~~~-~-~~~~~~---~~~~~~---~~~~~~~~~~~~  158 (334)
T 2pkf_A           88 RDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFY-PGAMSE-A-RNIKLA---DVVSAI---GKPELVIIGAND  158 (334)
T ss_dssp             HHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEE-CGGGGG-G-GGCCHH---HHHHHH---CSCSEEEEESCC
T ss_pred             HHHHHHCCCCCCCEEECCCCCCEEEEEEEECCCCEEEEEC-CCCHHH-H-HHHHHH---HHHHHC---CCCEEEEECCCC
T ss_conf             9999975998544046189986699999906885544433-763055-6-554321---012103---432055520578


Q ss_pred             CC
Q ss_conf             62
Q gi|254780659|r  156 ET  157 (274)
Q Consensus       156 Ea  157 (274)
                      -.
T Consensus       159 ~~  160 (334)
T 2pkf_A          159 PE  160 (334)
T ss_dssp             HH
T ss_pred             HH
T ss_conf             68


No 147
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=21.21  E-value=39  Score=13.85  Aligned_cols=25  Identities=12%  Similarity=0.283  Sum_probs=12.5

Q ss_pred             EEECCEECCCCCCCCHHHHHHHHHCCCCEEEE
Q ss_conf             99917004788678999999998379989993
Q gi|254780659|r   34 VIANGENSAGGFGITEKIFCEMMETGIDVITT   65 (274)
Q Consensus        34 vIaNgENaa~G~Git~~~~~~l~~~GvDviT~   65 (274)
                      +|+-=||+-.+       .+.-++.|+|.|=+
T Consensus         9 ~~~hr~NTl~a-------f~~ai~~Gad~iE~   33 (285)
T 1xx1_A            9 NLAHMVNAVAQ-------IPDFLDLGANALEA   33 (285)
T ss_dssp             EEESCCCSTTH-------HHHHHHHTCSEEEE
T ss_pred             EECCHHHHHHH-------HHHHHHCCCCEEEE
T ss_conf             43102228999-------99999859399999


No 148
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP binding, purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A
Probab=21.10  E-value=39  Score=13.84  Aligned_cols=39  Identities=26%  Similarity=0.417  Sum_probs=26.2

Q ss_pred             HHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEE
Q ss_conf             98089888609989999170047886789999999983799899
Q gi|254780659|r   20 EMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVI   63 (274)
Q Consensus        20 ~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDvi   63 (274)
                      +.+-.+-+++++|+||+..|+..     ...+++.|-+.|+-++
T Consensus        52 ~~i~~~~~~~~id~vi~g~e~~l-----~~~~a~~l~~~gi~~~   90 (424)
T 2yw2_A           52 EKLAEFAKNEGVDFTIVGPEAPL-----VEGIVDEFEKRGLKIF   90 (424)
T ss_dssp             HHHHHHHHHHTCSEEEECSHHHH-----HTTHHHHHHHTTCCEE
T ss_pred             HHHHHHHHHHCCCEEEECCCHHH-----HHHHHHHHHHCCCCCC
T ss_conf             99999999969999998984788-----8889999986798313


No 149
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, structural genomics, NPPSFA; 1.60A {Pyrococcus horikoshii OT3} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=21.05  E-value=39  Score=13.83  Aligned_cols=28  Identities=18%  Similarity=0.348  Sum_probs=18.4

Q ss_pred             HHHHHHHHHCCCCEEEECHHHHCCCCHHHH
Q ss_conf             999999983799899934265302220475
Q gi|254780659|r   49 EKIFCEMMETGIDVITTGNHVWDKREALVF   78 (274)
Q Consensus        49 ~~~~~~l~~~GvDviT~GNH~wd~kei~~~   78 (274)
                      .+.++.++++|+|.+|-  |..--+|.+.-
T Consensus        68 ~~~~~~~~~~gad~~Tv--h~~~g~~~i~~   95 (208)
T 2czd_A           68 RLIARKVFGAGADYVIV--HTFVGRDSVMA   95 (208)
T ss_dssp             HHHHHHHHHTTCSEEEE--ESTTCHHHHHH
T ss_pred             HHHHHHHHHCCCCEEEE--ECCCCHHHHHH
T ss_conf             99999976169988997--40278789987


No 150
>3co8_A Alanine racemase; protein structure initiative II, PSI-II, NYSGXRC, PLP, TIM barrel, structural genomics; HET: PLP; 1.70A {Oenococcus oeni psu-1}
Probab=20.32  E-value=41  Score=13.73  Aligned_cols=53  Identities=13%  Similarity=0.025  Sum_probs=36.3

Q ss_pred             HHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHH
Q ss_conf             999999808988860998999917004788678999999998379989993426
Q gi|254780659|r   15 RSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNH   68 (274)
Q Consensus        15 r~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH   68 (274)
                      +.+++.++..+|+..+..-+++=--.-|=|.|+ .++++.|.++|||.+--.+-
T Consensus        16 l~al~~N~~~ir~~~~~~~i~aVVKanAYGhG~-~~va~~l~~~Gv~~faVa~~   68 (380)
T 3co8_A           16 KSSLAYNVQYTKQVSGAKTLWLAVKSNAYGHGL-LQVSKIARECGVDGLAVSVL   68 (380)
T ss_dssp             HHHHHHHHHHHHHHHCCSEEEEECHHHHHTTCH-HHHHHHHGGGTCCEEEESSH
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCH-HHHHHHHHHCCCCEEEEEEH
T ss_conf             999999999998557998499999743464789-99999999869799999199


No 151
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=20.13  E-value=41  Score=13.71  Aligned_cols=68  Identities=16%  Similarity=0.276  Sum_probs=49.5

Q ss_pred             EEEEECCCH-HHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCC-CHHHHHHHHHCCCCEEEECHHHHCCCCHHHHH
Q ss_conf             999720276-88999999808988860998999917004788678-99999999837998999342653022204754
Q gi|254780659|r    4 LFLGDIVGK-TGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGI-TEKIFCEMMETGIDVITTGNHVWDKREALVFS   79 (274)
Q Consensus         4 LfiGDIvG~-~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Gi-t~~~~~~l~~~GvDviT~GNH~wd~kei~~~i   79 (274)
                      +++=|+-+. .++......+.++.++..+.+.+        |-|| +.+.+++++++|+|-+..|..++.+++.+.-+
T Consensus        48 i~ivDl~~~~~~~~~~~~~i~~i~~~~~~pi~~--------gGGIr~~e~~~~ll~~G~~kvii~S~~~~~~~~~~~~  117 (252)
T 1ka9_F           48 LVFLDISATHEERAILLDVVARVAERVFIPLTV--------GGGVRSLEDARKLLLSGADKVSVNSAAVRRPELIREL  117 (252)
T ss_dssp             EEEEECCSSTTCHHHHHHHHHHHHTTCCSCEEE--------ESSCCSHHHHHHHHHHTCSEEEECHHHHHCTHHHHHH
T ss_pred             EEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEE--------ECCCCCHHHHHHHHHCCCCEEEECCHHHCCHHHHHHH
T ss_conf             999953254233402899999987514874577--------3682678887899873898999884243078999999


No 152
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=20.12  E-value=41  Score=13.71  Aligned_cols=96  Identities=17%  Similarity=0.090  Sum_probs=47.1

Q ss_pred             CCCHHHHHHHHHHHCCCCC-------------CCCEEEEECCCCCHHHHHHHH----HHHCCCEEEEEECCCCCCCCHH-
Q ss_conf             2598999999986341368-------------998899962576228999999----7608957799806976246545-
Q gi|254780659|r  126 LDDPFRTADKILATCPLKE-------------QADVIVFDFHAETTSEKQCFA----HFVDSRASLVVGTHTHIPTADA-  187 (274)
Q Consensus       126 ~d~PF~~~d~~l~~~~~~~-------------~~~~i~VDfHaEaTSEK~A~g----~~lDGrVsaVvGTHTHV~TaD~-  187 (274)
                      +..++..+.+.|+..+.-.             +.-.++-|+-+..||=+.++.    .+=+.|+-++.|-|.--.+.+. 
T Consensus       306 lGi~~e~i~~aL~~f~g~~~R~e~~~ei~~~~~~~~iiDDya~~p~si~a~l~al~~~~~~~~ii~i~~~~~~~~~~~~~  385 (475)
T 1p3d_A          306 EGIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTRDLF  385 (475)
T ss_dssp             TTCCHHHHHHHHHTCCCBTTSSEEEEEEEETTEEEEEEEECCCSHHHHHHHHHHHHHHHCSSCEEEEECCBCHHHHHHTH
T ss_pred             CCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH
T ss_conf             49999999976764378753110688999548978999767889799999999998656997699995477773278999


Q ss_pred             ----HHCC-CCEEEEECCCCCCCHHHCCCCCHHHHHHHHH
Q ss_conf             ----6403-6728984056013712103547467898885
Q gi|254780659|r  188 ----QILD-GGTGYITDLGMCGDYNSSIGLDKEEPINRFI  222 (274)
Q Consensus       188 ----rILp-~GTayiTDvGMtG~~~SVIG~~~~~~i~rf~  222 (274)
                          +.+. --..+++++--.| -.-..|.+.+...+.+.
T Consensus       386 ~e~~~~l~~~d~vil~~i~~a~-e~~~~g~~~~~i~~~l~  424 (475)
T 1p3d_A          386 DDFVQVLSQVDALIMLDVYAAG-EAPIVGADSKSLCRSIR  424 (475)
T ss_dssp             HHHHHHHTTSSEEEEECCBCTT-CCCCTTCSHHHHHHHHH
T ss_pred             HHHHHHHHHCCEEEECCCCCCC-CCCCCCCCHHHHHHHHH
T ss_conf             9999999849999987766776-66545848999999998


No 153
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=20.02  E-value=41  Score=13.69  Aligned_cols=31  Identities=16%  Similarity=0.273  Sum_probs=18.7

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf             9269997202768899999980898886099899991
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIAN   37 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaN   37 (274)
                      |||||++.  -...+.    .+.++.++++.|+.+..
T Consensus         1 MKIl~~~~--~~~~~~----~~e~~~~~~~~ev~~~~   31 (331)
T 1xdw_A            1 MKVLCYGV--RDVELP----IFEACNKEFGYDIKCVP   31 (331)
T ss_dssp             CEEEECSC--CTTTHH----HHHHHGGGTCCEEEECS
T ss_pred             CEEEEECC--CCCCHH----HHHHHHHHCCCEEEEEC
T ss_conf             98999815--855679----99997656495899917


Done!