Query         gi|254780659|ref|YP_003065072.1| hypothetical protein CLIBASIA_02730 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 274
No_of_seqs    135 out of 850
Neff          4.4 
Searched_HMMs 13730
Date          Wed Jun  1 09:17:45 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780659.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1t71a_ d.159.1.9 (A:) Hypothe 100.0       0       0  808.2  28.1  263    1-273     5-273 (281)
  2 d2z06a1 d.159.1.10 (A:1-252) H 100.0       0       0  804.6  27.7  250    1-262     1-250 (252)
  3 d1t70a_ d.159.1.9 (A:) Putativ 100.0       0       0  801.6  27.2  251    1-262     1-253 (255)
  4 d1usha2 d.159.1.2 (A:26-362) 5  99.0   2E-08 1.5E-12   72.5  14.5  186    1-187     9-235 (337)
  5 d2z1aa2 d.159.1.2 (A:28-329) 5  98.9 3.2E-07 2.3E-11   64.7  18.2  180    2-186     4-218 (302)
  6 d3c9fa2 d.159.1.2 (A:16-337) 5  98.8 1.2E-07 8.7E-12   67.5  13.0  190    2-195    13-248 (322)
  7 d1s3la_ d.159.1.7 (A:) Putativ  97.0  0.0041   3E-07   38.1   9.9  135    1-198     1-136 (165)
  8 d2qfra2 d.159.1.1 (A:121-432)   96.8    0.02 1.5E-06   33.6  12.6  193    2-207     9-246 (312)
  9 d1uf3a_ d.159.1.6 (A:) Hypothe  95.5   0.084 6.1E-06   29.6  11.2  183    1-204     6-208 (228)
 10 d1su1a_ d.159.1.7 (A:) Phospho  95.2   0.025 1.8E-06   33.0   6.3   71    1-74      2-80  (184)
 11 d2hy1a1 d.159.1.11 (A:10-265)   94.8    0.14 9.9E-06   28.2  13.4  173    1-198     5-214 (256)
 12 d3d03a1 d.159.1.11 (A:1-271) G  94.3    0.18 1.3E-05   27.4  10.9  179    1-198     1-211 (271)
 13 d1ii7a_ d.159.1.4 (A:) Mre11 {  93.3    0.23 1.7E-05   26.7   7.8   82    1-84      1-103 (333)
 14 d1nnwa_ d.159.1.5 (A:) Hypothe  89.7    0.35 2.6E-05   25.5   5.5   64    1-69      1-73  (251)
 15 d1g5ba_ d.159.1.3 (A:) lambda   89.3    0.13 9.7E-06   28.3   3.1   64    2-69     14-77  (219)
 16 d1tqja_ c.1.2.2 (A:) D-ribulos  89.1   0.038 2.8E-06   31.8   0.2   58  126-191    69-131 (221)
 17 d1z2wa1 d.159.1.7 (A:1-182) Va  88.3   0.059 4.3E-06   30.6   0.7  139    1-207     1-140 (182)
 18 d1rpxa_ c.1.2.2 (A:) D-ribulos  87.4   0.044 3.2E-06   31.4  -0.4   59  126-192    77-140 (230)
 19 d1p0ka_ c.1.4.1 (A:) Isopenten  86.0    0.86 6.3E-05   23.0   5.6   44   20-68    148-191 (329)
 20 d2yvta1 d.159.1.6 (A:4-260) Un  84.7    0.58 4.2E-05   24.2   4.2   66    1-69      3-97  (257)
 21 d2nxfa1 d.159.1.12 (A:3-322) U  83.3     1.4  0.0001   21.6  13.7   74    1-75      4-102 (320)
 22 d2flia1 c.1.2.2 (A:3-219) D-ri  82.9    0.35 2.5E-05   25.6   2.5   57  126-189    68-127 (217)
 23 d1utea_ d.159.1.1 (A:) Mammali  79.6       2 0.00014   20.7  14.9  189    1-204     5-241 (302)
 24 d1h1ya_ c.1.2.2 (A:) D-ribulos  77.4    0.32 2.3E-05   25.8   0.8   57  126-189    68-128 (220)
 25 d2iw0a1 c.6.2.3 (A:29-248) Chi  75.6    0.35 2.6E-05   25.6   0.6   57   17-76     27-84  (220)
 26 d2a22a1 d.159.1.7 (A:4-196) Va  75.3    0.76 5.6E-05   23.4   2.3  142    3-204     6-148 (193)
 27 d1tqxa_ c.1.2.2 (A:) D-ribulos  72.8       2 0.00015   20.7   3.9   57  126-189    70-131 (221)
 28 d1rd5a_ c.1.2.4 (A:) Trp synth  69.5     3.5 0.00025   19.1   6.1   48   18-66      4-51  (261)
 29 d1u6ka1 c.127.1.1 (A:2-283) F4  62.9     4.6 0.00034   18.3   6.0  110   15-151    48-182 (282)
 30 d2blna2 c.65.1.1 (A:1-203) Pol  60.3     5.2 0.00038   18.0   4.8   88    1-96      1-89  (203)
 31 d1geqa_ c.1.2.4 (A:) Trp synth  59.4     5.4 0.00039   17.9   7.4  151   18-179    68-222 (248)
 32 d2cc0a1 c.6.2.3 (A:1-192) Acet  56.8     3.6 0.00026   19.0   2.7   53   18-77     19-71  (192)
 33 d1fs0g_ c.49.2.1 (G:) ATP synt  55.7     1.5 0.00011   21.4   0.6   13  128-140    76-88  (230)
 34 d2c71a1 c.6.2.3 (A:480-683) Xy  55.6     3.7 0.00027   18.9   2.6   52   17-75     15-67  (204)
 35 d1pvna1 c.1.5.1 (A:2-99,A:231-  53.8     6.6 0.00048   17.3   3.7   42   18-66    138-180 (362)
 36 d1qapa1 c.1.17.1 (A:130-296) Q  52.6     5.6 0.00041   17.7   3.1   22   46-67    131-152 (167)
 37 d1np7a2 c.28.1.1 (A:1-204) Cry  52.3     2.3 0.00017   20.3   1.1   47   20-66     90-136 (204)
 38 d1ccwa_ c.23.6.1 (A:) Glutamat  52.0       7 0.00051   17.1   4.2   65   15-81     68-132 (137)
 39 d1owla2 c.28.1.1 (A:3-204) DNA  51.8       4 0.00029   18.7   2.3   50   20-69     80-129 (202)
 40 d2c1ia1 c.6.2.3 (A:268-463) Pe  51.3     7.2 0.00053   17.0   4.7   52   18-76     16-67  (196)
 41 d1jvna1 c.1.2.1 (A:230-552) Cy  50.9     7.3 0.00053   17.0   4.3   74    4-77     65-146 (323)
 42 d1c3pa_ c.42.1.2 (A:) HDAC hom  49.2     7.8 0.00057   16.8   6.0   51  147-206   160-213 (372)
 43 d1xi3a_ c.1.3.1 (A:) Thiamin p  47.5     6.5 0.00047   17.3   2.8   32   49-80     20-51  (206)
 44 d1u3da2 c.28.1.1 (A:13-197) Cr  46.9     4.7 0.00035   18.2   2.0   48   21-68     80-127 (185)
 45 d2afba1 c.72.1.1 (A:-2-330) 2-  46.7       5 0.00036   18.1   2.1   95    1-116     4-107 (333)
 46 d2tpsa_ c.1.3.1 (A:) Thiamin p  44.7     5.7 0.00041   17.7   2.1   36   33-71     20-55  (226)
 47 d1viza_ c.1.4.1 (A:) PcrB prot  42.3     9.9 0.00072   16.2   3.1   49   46-97     19-76  (229)
 48 d1t64a_ c.42.1.2 (A:) Histone   41.7      10 0.00074   16.1   5.9   49  146-204   157-208 (364)
 49 d1qpoa1 c.1.17.1 (A:117-285) Q  41.5     5.3 0.00039   17.9   1.6   23   46-68    134-156 (169)
 50 d1ulua_ c.2.1.2 (A:) Enoyl-ACP  39.9     9.3 0.00068   16.3   2.6   28   41-68     16-43  (256)
 51 d2jdig1 c.49.2.1 (G:1-272) ATP  39.0     3.5 0.00026   19.1   0.4   16  198-213    73-88  (272)
 52 d1vcfa1 c.1.4.1 (A:23-332) Iso  38.1      11 0.00083   15.8   2.8   22   50-71     57-78  (310)
 53 d1eo1a_ c.55.5.1 (A:) Hypothet  34.5      13 0.00095   15.4   5.2   34   23-64     58-91  (124)
 54 d1yxya1 c.1.2.5 (A:4-233) Puta  34.1      13 0.00097   15.3   3.3   23   44-66     31-53  (230)
 55 d1gsoa2 c.30.1.1 (A:-2-103) Gl  33.1      13 0.00096   15.4   2.5   33   50-82     57-89  (105)
 56 d2pd4a1 c.2.1.2 (A:2-275) Enoy  32.2      11  0.0008   15.9   2.0   28   41-68     13-40  (274)
 57 d1pvva2 c.78.1.1 (A:151-313) O  32.1      14   0.001   15.1   2.9   46    1-56      5-50  (163)
 58 d1ka9f_ c.1.2.1 (F:) Cyclase s  31.4      15  0.0011   15.0   6.9  158    4-181    47-228 (251)
 59 d3ck2a1 d.159.1.7 (A:1-173) Un  31.3      15  0.0011   15.0   3.3   58    1-71      4-61  (173)
 60 d2f6ua1 c.1.4.1 (A:1001-1231)   31.2      14   0.001   15.2   2.4   22   45-66     16-37  (231)
 61 d1rm4a1 c.2.1.3 (A:1-148,A:313  31.0      13 0.00095   15.4   2.2  122    1-179     1-122 (172)
 62 d2j13a1 c.6.2.3 (A:1-235) Puta  30.9      15  0.0011   15.0   2.5   50   20-76     62-111 (235)
 63 d3c10a1 c.42.1.2 (A:515-900) H  29.7      16  0.0011   14.9   5.2   65  126-202   168-235 (386)
 64 d1ny1a_ c.6.2.3 (A:) Probable   28.8      16  0.0012   14.8   2.5   51   19-76     59-109 (235)
 65 d1vrda1 c.1.5.1 (A:1-85,A:213-  28.5      16  0.0012   14.7   5.3   15   50-64    101-115 (330)
 66 d1o4ua1 c.1.17.1 (A:104-273) Q  27.8     4.4 0.00032   18.4  -0.6   55   19-81     65-121 (170)
 67 d1pvda1 c.31.1.3 (A:182-360) P  26.6     2.7  0.0002   19.8  -1.9   52   14-68     16-67  (179)
 68 d1ujpa_ c.1.2.4 (A:) Trp synth  26.5      18  0.0013   14.5   4.2  152   18-180    79-232 (271)
 69 d1qopa_ c.1.2.4 (A:) Trp synth  25.7      18  0.0013   14.4   4.6   45   18-66      4-51  (267)
 70 d2czda1 c.1.2.3 (A:1-206) Orot  25.7      18  0.0013   14.4   4.8   29   49-79     68-96  (206)
 71 d1j9ba_ c.47.1.12 (A:) Arsenat  25.5      15  0.0011   14.9   1.8   76    9-89      4-94  (138)
 72 d1j9ja_ c.106.1.1 (A:) SurE ho  25.1      19  0.0014   14.3   3.1   46    1-49      1-47  (247)
 73 d1qo2a_ c.1.2.1 (A:) Phosphori  24.8      19  0.0014   14.3   4.3   38   44-81     79-117 (241)
 74 d2i7xa1 d.157.1.10 (A:1-422,A:  24.7      19  0.0014   14.3   2.8   27   85-113   150-176 (514)
 75 d1zfja1 c.1.5.1 (A:2-94,A:221-  24.6      19  0.0014   14.3   5.3   14   50-63    110-123 (365)
 76 d1otha2 c.78.1.1 (A:185-354) O  24.3      20  0.0014   14.2   2.3   44    1-54      5-48  (170)
 77 d1k3ta1 c.2.1.3 (A:1-164,A:334  22.9      19  0.0014   14.3   1.8  134    1-180     3-136 (190)
 78 d1q6oa_ c.1.2.3 (A:) 3-keto-L-  22.4     6.4 0.00047   17.4  -0.7   28  126-160    64-91  (213)
 79 d1obfo1 c.2.1.3 (O:1-152,O:315  22.2      21  0.0016   14.0   2.0   48    1-58      2-49  (173)
 80 d2h7ma1 c.2.1.2 (A:2-269) Enoy  21.9      19  0.0014   14.3   1.7   26   41-66     14-39  (268)
 81 d1scza_ c.43.1.1 (A:) Dihydrol  21.2      18  0.0013   14.5   1.4   17  190-206   144-160 (233)
 82 d2nzug1 c.93.1.1 (G:58-332) Gl  21.1      23  0.0016   13.8   5.8   72   12-86     15-86  (275)
 83 d2b4ga1 c.1.4.1 (A:2-313) Dihy  20.7      23  0.0017   13.8   6.4   28   41-68     18-45  (312)
 84 d2bfwa1 c.87.1.8 (A:218-413) G  20.2      24  0.0017   13.7   4.1  105    2-116    34-143 (196)

No 1  
>d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=100.00  E-value=0  Score=808.25  Aligned_cols=263  Identities=35%  Similarity=0.604  Sum_probs=250.9

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH
Q ss_conf             92699972027688999999808988860998999917004788678999999998379989993426530222047542
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQ   80 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~   80 (274)
                      |||||||||||+|||++|+++||+||++|++|||||||||||+|+|||+++|++|+++||||||+|||+|||||+++||+
T Consensus         5 MkILfiGDIvG~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa~G~Git~k~~~eL~~~GvDvIT~GNH~wd~kei~~~i~   84 (281)
T d1t71a_           5 IKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGVNYITMGNHTWFQKLDLAVVI   84 (281)
T ss_dssp             CEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHTCCEEECCTTTTCCGGGHHHHT
T ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEECCCHHHHCHHHHHHHH
T ss_conf             46999971688889999999839999971999999887657899398999999999707867975724553314278776


Q ss_pred             HCCCEEEECCCCC----CCCCCCEEEEECCCCCEEEEEEEEHHHCCCC-CCCCHHHHHHHHHHHCCCCCCCCEEEEECCC
Q ss_conf             1893897500798----8875407999848992899999600005883-3259899999998634136899889996257
Q gi|254780659|r   81 RHCKFLRPANYPP----NTPGNGSGLYCAKNGSNVLVANIMGRVFMNP-LLDDPFRTADKILATCPLKEQADVIVFDFHA  155 (274)
Q Consensus        81 ~~~~ilRP~N~p~----~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~-~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHa  155 (274)
                      +++|||||+|||+    ++||+||.+++. ++.|++|+|||||+||.| .++|||..+++++.+    .++|+|||||||
T Consensus        85 ~~~~llRP~N~p~~~p~~~pG~G~~i~~~-~~~~i~Vinl~G~~fm~~~~~~~pf~~~~~~~~~----~~~d~i~VDfHa  159 (281)
T d1t71a_          85 NKKDLVRPLNLDTSFAFHNLGQGSLVFEF-NKAKIRITNLLGTSVPLPFKTTNPFKVLKELILK----RDCDLHIVDFHA  159 (281)
T ss_dssp             TCTTEECBSCBCTTSTTTTSSBSEEEEEC-SSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTT----CCCSEEEEEEEC
T ss_pred             HCCCCCCCCCCCCCCCCCCCCCEEEEEEC-CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCC----CCCCEEEEEECC
T ss_conf             13433115544333567999742899971-6543320122164224444563788777776404----678769998035


Q ss_pred             CCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCC-HHHCCCCCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             62289999997608957799806976246545640367289840560137-12103547467898885168865411157
Q gi|254780659|r  156 ETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCGD-YNSSIGLDKEEPINRFITQIPRNRFVIAN  234 (274)
Q Consensus       156 EaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG~-~~SVIG~~~~~~i~rf~t~~p~~r~~~a~  234 (274)
                      ||||||+|||||||||||||+||||||||||+||||+|||||||+||||| |||||||++|.+|+||++++|. ||++|+
T Consensus       160 EATSEK~A~g~~lDGrvsaVvGTHTHV~TaD~rILp~GTAyiTDvGMtG~~ydSVIG~~~e~~i~rf~t~~p~-rf~~a~  238 (281)
T d1t71a_         160 ETTSEKNAFCMAFDGYVTTIFGTHTHVPSADLRITPKGSAYITDVGMCGPGFGSVIGANPEQSIRLFCAGSRE-HFEVSK  238 (281)
T ss_dssp             SCHHHHHHHHHHHTTTSSEEEEESSSSCCTTCEECTTSCEEESCCCEEBCCTTSBTTBCHHHHHHHHTTCCCC-CCCBCC
T ss_pred             CHHHHHHHHEEEECCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCC-CCCCCC
T ss_conf             1066552330440796899982575441576401267728983575544766742044707899999718997-766789


Q ss_pred             CCEEEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCC
Q ss_conf             871999999998479986746789987683165787534
Q gi|254780659|r  235 GPATLCGICAEISDVTGLAEKIAPIRIGPRLSETRPDFW  273 (274)
Q Consensus       235 g~~~l~gv~ieid~~tG~a~~I~ri~igg~L~e~~p~~~  273 (274)
                      ++++|||+++|+|++||+|++|+||||    .|..|.|.
T Consensus       239 g~~~l~gv~i~id~~tg~a~~I~ri~i----~ed~p~~l  273 (281)
T d1t71a_         239 CGAQLNGVFFEVDVNTKKVIKTEAIRI----VEDDPRYL  273 (281)
T ss_dssp             SCEEEEEEEEECCTTTCCCCEEEEEEE----EECCGGGT
T ss_pred             CCCEEEEEEEEEECCCCCEEEEEEEEE----ECCCHHHH
T ss_conf             987999999998889897368999997----05773478


No 2  
>d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]}
Probab=100.00  E-value=0  Score=804.61  Aligned_cols=250  Identities=43%  Similarity=0.731  Sum_probs=241.9

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH
Q ss_conf             92699972027688999999808988860998999917004788678999999998379989993426530222047542
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQ   80 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~   80 (274)
                      |||||||||||+|||++|+++||+||++|  |||||||||||+|+|||+++|++|+++||||||+|||+|||||+++|++
T Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~Lk~~~--DfVIaNgENaa~G~Git~k~~~~L~~~GVDvIT~GNH~wdkkei~~~i~   78 (252)
T d2z06a1           1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY--DLVIANGENAARGKGLDRRSYRLLREAGVDLVSLGNHAWDHKEVYALLE   78 (252)
T ss_dssp             CEEEEECCBCHHHHHHHHHHHHHHHGGGC--SEEEEECTTTTTTSSCCHHHHHHHHHHTCCEEECCTTTTSCTTHHHHHH
T ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHHHC--CEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHC
T ss_conf             90999960689889999998767778518--8899962136888389999999999707978974750124345566640


Q ss_pred             HCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH
Q ss_conf             18938975007988875407999848992899999600005883325989999999863413689988999625762289
Q gi|254780659|r   81 RHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSE  160 (274)
Q Consensus        81 ~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSE  160 (274)
                      +++ ||||+|||+++||+||.+|+. +|+|++|+|||||+||.+ +||||+++|+++++    .++|+||||||||||||
T Consensus        79 ~~~-llRP~N~p~~~PG~G~~i~~~-~g~ki~ViNl~Gr~fm~~-~d~PF~~~d~~~~~----~~~~~i~VDfHaEaTSE  151 (252)
T d2z06a1          79 SEP-VVRPLNYPPGTPGKGFWRLEV-GGESLLFVQVMGRIFMDP-LDDPFRALDRLLEE----EKADYVLVEVHAEATSE  151 (252)
T ss_dssp             HSS-EECCTTSCSSCSSCSEEEEEE-TTEEEEEEEEECCTTSCC-CCCHHHHHHHHHHH----CCCSEEEEEEECSCHHH
T ss_pred             CCC-CCCHHHCCCCCCCCCEEEECC-CCCEEEEEEECCCCCCCC-CCCHHHHHHHHHHH----CCCCEEEEECCCCHHHH
T ss_conf             263-235433257887773799814-990688887313136787-78989999999862----67658999845621543


Q ss_pred             HHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEE
Q ss_conf             99999760895779980697624654564036728984056013712103547467898885168865411157871999
Q gi|254780659|r  161 KQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCGDYNSSIGLDKEEPINRFITQIPRNRFVIANGPATLC  240 (274)
Q Consensus       161 K~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG~~~SVIG~~~~~~i~rf~t~~p~~r~~~a~g~~~l~  240 (274)
                      |+|||||||||||||+||||||||||+||||+|||||||+||||||||||||+++++|+||++++|. ||++|+|+++||
T Consensus       152 K~A~g~~ldGrvsavvGTHTHV~TaD~rILp~GTayiTDvGM~G~~~SVIG~~~e~~i~rf~t~~p~-rf~~a~g~~~l~  230 (252)
T d2z06a1         152 KMALAHYLDGRASAVLGTHTHVPTLDATRLPKGTLYQTDVGMTGTYHSIIGGEVETFLARFLTGRPQ-PFRAAQGKARFH  230 (252)
T ss_dssp             HHHHHHHHBTTBSEEEEESSCSCBSCCEECTTSCEEESCCCCBEESSSBTTBCHHHHHHHHHHCSCC-CCCBCCSCEEEE
T ss_pred             HEEEEEECCCCEEEEEECCCCCCCCCCEEECCCEEEECCCCCCCCHHHHCCCCHHHHHHHHHHCCCC-CCCCCCCCCEEE
T ss_conf             3212476079789997167545565447832770898057653365664176748999999718998-763579985999


Q ss_pred             EEEEEEECCCCCEEEEEEEEEC
Q ss_conf             9999984799867467899876
Q gi|254780659|r  241 GICAEISDVTGLAEKIAPIRIG  262 (274)
Q Consensus       241 gv~ieid~~tG~a~~I~ri~ig  262 (274)
                      ||+|++|  ||+|++|+|||++
T Consensus       231 gv~i~~~--tg~a~~I~~i~~~  250 (252)
T d2z06a1         231 ATELVFE--GGRPVAISPYVWE  250 (252)
T ss_dssp             EEEEEEE--TTEEEEEEEEEEE
T ss_pred             EEEEECC--CCCEEEEEEEEEC
T ss_conf             9999958--9978578989736


No 3  
>d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]}
Probab=100.00  E-value=0  Score=801.61  Aligned_cols=251  Identities=41%  Similarity=0.741  Sum_probs=241.7

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH
Q ss_conf             92699972027688999999808988860998999917004788678999999998379989993426530222047542
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQ   80 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~   80 (274)
                      |||||||||||+|||++|+++||+||++|  |||||||||||+|+|||+++|++|+++||||||+|||+|||||+++||+
T Consensus         1 MkILfiGDIvG~~Gr~~v~~~Lp~lk~~~--DfVIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wdkkei~~~i~   78 (255)
T d1t70a_           1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF--DFVIVNMENSAGGFGMHRDAARGALEAGAGCLTLGNHAWHHKDIYPMLS   78 (255)
T ss_dssp             CEEEEECCBBHHHHHHHHHHHHHHHGGGC--SEEEEECTBTTTTSSCCHHHHHHHHHHTCSEEECCTTTTSSTTHHHHHH
T ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHHHC--CEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHCCHHHHHHHH
T ss_conf             92999951789889999998728878638--8899987557888489999999999767867873723330235789886


Q ss_pred             HC-CCEEEECCCCC-CCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCH
Q ss_conf             18-93897500798-88754079998489928999996000058833259899999998634136899889996257622
Q gi|254780659|r   81 RH-CKFLRPANYPP-NTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETT  158 (274)
Q Consensus        81 ~~-~~ilRP~N~p~-~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaT  158 (274)
                      ++ ++|+||+|||+ ++||+||.+++. +|+|++|+|||||+||+| +||||+++|++|++    .+.++||||||||||
T Consensus        79 ~~~~~ilRP~N~p~~~~PG~G~~i~~~-~g~ki~ViNl~Gr~fM~~-~d~PF~~~d~~l~~----~~~~~i~VDfHaEaT  152 (255)
T d1t70a_          79 EDTYPIVRPLNYADPGTPGVGWRTFDV-NGEKLTVVNLLGRVFMEA-VDNPFRTMDALLER----DDLGTVFVDFHAEAT  152 (255)
T ss_dssp             TTCSCEECCSCCCCTTCSSCSEEEEEC-SSSEEEEEEEECCTTSCC-CSCHHHHHHHHTTC----SSCCEEEEEEECSCH
T ss_pred             HCCHHHHHHHCCCCCCCCCCEEEEEEE-CCCCEEEEEECCCCCCCC-CCCHHHHHHHHHHH----CCCCEEEEECCCHHH
T ss_conf             301111134316788999863999960-667589999414115676-66879999999864----678859998044147


Q ss_pred             HHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEE
Q ss_conf             89999997608957799806976246545640367289840560137121035474678988851688654111578719
Q gi|254780659|r  159 SEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCGDYNSSIGLDKEEPINRFITQIPRNRFVIANGPAT  238 (274)
Q Consensus       159 SEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG~~~SVIG~~~~~~i~rf~t~~p~~r~~~a~g~~~  238 (274)
                      |||+|||||||||||||+||||||||||+||||+|||||||+||||||||||||+++.+|+||++++|. ||++|+++++
T Consensus       153 SEK~A~g~~ldGrvsav~GTHTHV~TaD~rIlp~GTay~TDvGMtG~~~SVIG~~~~~~i~rf~t~~p~-rf~~a~g~~~  231 (255)
T d1t70a_         153 SEKEAMGWHLAGRVAAVIGTHTHVPTADTRILKGGTAYQTDAGFTGPHDSIIGSAIEGPLQRFLTERPH-RYGVAEGRAE  231 (255)
T ss_dssp             HHHHHHHHHHTTSSSEEEEESSCSCBSCCEEETTTEEEESCCCCBEESSSBTTBCSHHHHHHHHHCSCC-CCCBCCSCEE
T ss_pred             HHHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCCCEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCC-CCCCCCCCCE
T ss_conf             778888853437679998467221255325714771898057552054561276728999999708998-8756799879


Q ss_pred             EEEEEEEEECCCCCEEEEEEEEEC
Q ss_conf             999999984799867467899876
Q gi|254780659|r  239 LCGICAEISDVTGLAEKIAPIRIG  262 (274)
Q Consensus       239 l~gv~ieid~~tG~a~~I~ri~ig  262 (274)
                      ||||++|+|  ||+|++|+||||.
T Consensus       232 l~gv~ie~d--~g~a~~I~~i~i~  253 (255)
T d1t70a_         232 LNGVALHFE--GGKATAAERYRFI  253 (255)
T ss_dssp             EEEEEEEEE--TTEEEEEEEEEEE
T ss_pred             EEEEEEEEC--CCCEEEEEEEEEC
T ss_conf             999999967--9978888999845


No 4  
>d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=98.96  E-value=2e-08  Score=72.47  Aligned_cols=186  Identities=17%  Similarity=0.183  Sum_probs=122.7

Q ss_pred             CEEEEEEECCCH--------HHHHHHHHHHHHHHHH---CCCCEEEECCEECCCCCCC-----CHHHHHHHHHCCCCEEE
Q ss_conf             926999720276--------8899999980898886---0998999917004788678-----99999999837998999
Q gi|254780659|r    1 MRLLFLGDIVGK--------TGRSIVYEMLPRLIRD---FQLDFVIANGENSAGGFGI-----TEKIFCEMMETGIDVIT   64 (274)
Q Consensus         1 MkiLfiGDIvG~--------~Gr~~v~~~Lp~l~~~---~~~DfvIaNgENaa~G~Gi-----t~~~~~~l~~~GvDviT   64 (274)
                      ++||..-|+-|+        .|...+...+..+|++   .+++.++..+-..-.|..+     ....++-|-.+|.|++|
T Consensus         9 ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~s~~~~g~~~~~~mn~~g~Da~~   88 (337)
T d1usha2           9 ITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYDAMA   88 (337)
T ss_dssp             EEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHTCCEEE
T ss_pred             EEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHHCCCEEEE
T ss_conf             99999841233773778788679999999999999987449988999899876667788875885789999764881997


Q ss_pred             ECHHHHCCC--CHHHHHHHCCCEEEECCCCCCC---C-CCCEEEEECCCCCEEEEEEEEHHHCC---------CCCCCCH
Q ss_conf             342653022--2047542189389750079888---7-54079998489928999996000058---------8332598
Q gi|254780659|r   65 TGNHVWDKR--EALVFSQRHCKFLRPANYPPNT---P-GNGSGLYCAKNGSNVLVANIMGRVFM---------NPLLDDP  129 (274)
Q Consensus        65 ~GNH~wd~k--ei~~~i~~~~~ilRP~N~p~~~---P-G~G~~i~~~~~g~ki~Vinl~Gr~fM---------~~~~d~P  129 (274)
                      .|||=||.-  .+..++...+.-+--+|+-...   | -.-|.|++ .+|.||+|+-+...-..         .-.+.+|
T Consensus        89 ~GNHEfd~G~~~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~-~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~d~  167 (337)
T d1usha2          89 IGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFK-RQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKP  167 (337)
T ss_dssp             CCGGGGSSCHHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEE-ETTEEEEEEEEECTTTTTSSSCCCCTTEEECCH
T ss_pred             ECHHHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEEE-CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf             0415531346899999975596076120211123322346345442-288678763024544333337654667323358


Q ss_pred             HHHHHHHHHHCCCCCCCCEEEEECCCCCHH---------HHHHHHHHHC-CCEEEEEECCCCCCCCHH
Q ss_conf             999999986341368998899962576228---------9999997608-957799806976246545
Q gi|254780659|r  130 FRTADKILATCPLKEQADVIVFDFHAETTS---------EKQCFAHFVD-SRASLVVGTHTHIPTADA  187 (274)
Q Consensus       130 F~~~d~~l~~~~~~~~~~~i~VDfHaEaTS---------EK~A~g~~lD-GrVsaVvGTHTHV~TaD~  187 (274)
                      -.++.+.+++++..+.+|+|++=.|.-...         +-..++..+. ..|.+|+|-|||......
T Consensus       168 ~~~~~~~~~~l~~~~~~D~iI~lsH~G~~~d~~~~~~~~~~~~la~~~~~~~vD~IvgGHsH~~~~~~  235 (337)
T d1usha2         168 ADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCMA  235 (337)
T ss_dssp             HHHHHHHHHHHHHHTCCSEEEEEEESCCCGGGCCTTSCCCHHHHHHHSCTTSSSEEECCSSCCBCCEE
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCC
T ss_conf             89999999998631678899990134754454333236504789972766673598568667644435


No 5  
>d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=98.88  E-value=3.2e-07  Score=64.68  Aligned_cols=180  Identities=16%  Similarity=0.096  Sum_probs=129.8

Q ss_pred             EEEEEEECCCH---------------HHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCC-----CHHHHHHHHHCCCC
Q ss_conf             26999720276---------------88999999808988860998999917004788678-----99999999837998
Q gi|254780659|r    2 RLLFLGDIVGK---------------TGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGI-----TEKIFCEMMETGID   61 (274)
Q Consensus         2 kiLfiGDIvG~---------------~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Gi-----t~~~~~~l~~~GvD   61 (274)
                      .||..-|+-|.               .|...+...+.++|++.. +.+++.+-+.-.|..+     .....+-+-.+|.|
T Consensus         4 ~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~-~~l~ldaGD~~~Gs~~~~~~~g~~~~~~~n~~gyD   82 (302)
T d2z1aa2           4 TLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAK-NPLFLDAGDVFQGTLYFNQYRGLADRYFMHRLRYR   82 (302)
T ss_dssp             EEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSS-SEEEEECSCCSSSSHHHHHHTTHHHHHHHHHTTCC
T ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CEEEEECCCCCCCCHHHHHHCCHHHHHHHHHCCCC
T ss_conf             99997466448646155556776654759999999999997389-81999768899987767521432579999863664


Q ss_pred             EEEECHHHHCC--CCHHHHHHHCCCEEEECCCCCC----CC--CCCEEEEECCCCCEEEEEEEEHHHC-------CCCCC
Q ss_conf             99934265302--2204754218938975007988----87--5407999848992899999600005-------88332
Q gi|254780659|r   62 VITTGNHVWDK--REALVFSQRHCKFLRPANYPPN----TP--GNGSGLYCAKNGSNVLVANIMGRVF-------MNPLL  126 (274)
Q Consensus        62 viT~GNH~wd~--kei~~~i~~~~~ilRP~N~p~~----~P--G~G~~i~~~~~g~ki~Vinl~Gr~f-------M~~~~  126 (274)
                      ++|.|||=||.  ..+..+++..+.=.=.+|....    .+  =..|.+++ ++|.||+|+-+...-.       .....
T Consensus        83 a~~~GNHEfd~G~~~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~-~~g~kIgiiG~~t~~~~~~~~~~~~~~~  161 (302)
T d2z1aa2          83 AMALGNHEFDLGPGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVV-VGGERVGIIGLTTPDTREISNPGPTVAF  161 (302)
T ss_dssp             EEECCGGGGTTCHHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEE-ETTEEEEEEEEECTTHHHHSCCCTTCEE
T ss_pred             CCCCCCHHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEE-ECCEEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf             230560664148057888864226653676454156633357644069997-7884888871146664000134683222


Q ss_pred             CCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCH
Q ss_conf             598999999986341368998899962576228999999760895779980697624654
Q gi|254780659|r  127 DDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCFAHFVDSRASLVVGTHTHIPTAD  186 (274)
Q Consensus       127 d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD  186 (274)
                      .+|..++.+.+++++ .+++|+|++=-|.-. .|-..++--++| +..++|-|+|....+
T Consensus       162 ~d~~~~~~~~~~~l~-~~~~DiiV~l~H~g~-~~d~~la~~~~g-iD~ii~gh~h~~~~~  218 (302)
T d2z1aa2         162 LDPYESAQKAVYELL-AKGVNKIVVLSHLGY-GEDLKLARRLVG-VQVIVGGHSHTLLGS  218 (302)
T ss_dssp             CCHHHHHHHHHHHHH-HTTCCCEEEEEESCH-HHHHHHHTTCSS-CCEEEECSSCCCBSC
T ss_pred             CCHHHHHHHHHHHHH-CCCCCEEEEEECCCC-CHHHHHHHCCCC-EEEEECCCCCEEECC
T ss_conf             688898777788763-048987999622574-024678753998-345406851000036


No 6  
>d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]}
Probab=98.77  E-value=1.2e-07  Score=67.48  Aligned_cols=190  Identities=18%  Similarity=0.153  Sum_probs=116.4

Q ss_pred             EEEEEEECCCH--------------HHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCC-------CHHHHHHHHHCCC
Q ss_conf             26999720276--------------88999999808988860998999917004788678-------9999999983799
Q gi|254780659|r    2 RLLFLGDIVGK--------------TGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGI-------TEKIFCEMMETGI   60 (274)
Q Consensus         2 kiLfiGDIvG~--------------~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Gi-------t~~~~~~l~~~Gv   60 (274)
                      +||-.-|+=|.              .|--.+..++.+.+++.++|.+.+.+-..-.|.++       .....+-+-.+|.
T Consensus        13 ~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~~mn~lgy   92 (322)
T d3c9fa2          13 NFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFIKQDY   92 (322)
T ss_dssp             EEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHTTSCC
T ss_pred             EEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHCCCC
T ss_conf             99997014668777265556567632099999999999986399879997785678971355245578599999860687


Q ss_pred             CEEEECHHHHCCCC-----HHHHHHHCCCEEEECCC---CCC---CC-CCCEEEEECCCCCEEEEEEEEHHHCCCC----
Q ss_conf             89993426530222-----04754218938975007---988---87-5407999848992899999600005883----
Q gi|254780659|r   61 DVITTGNHVWDKRE-----ALVFSQRHCKFLRPANY---PPN---TP-GNGSGLYCAKNGSNVLVANIMGRVFMNP----  124 (274)
Q Consensus        61 DviT~GNH~wd~ke-----i~~~i~~~~~ilRP~N~---p~~---~P-G~G~~i~~~~~g~ki~Vinl~Gr~fM~~----  124 (274)
                      |++|.|||=||.-+     ....+++.+.=+--+|.   ...   .| ++-|.+++. +|.+++|+-+.- .+-.+    
T Consensus        93 Da~t~GNHEfd~g~~~l~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~~~y~i~~~-~~~~i~i~g~~~-~~~~~~~~~  170 (322)
T d3c9fa2          93 DLLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTT-PIRGIRVMAFGF-LFDFKRFNS  170 (322)
T ss_dssp             SEECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEEC-TTTCCEEEEEEC-CCCCCCCCT
T ss_pred             CEEEECCEECCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEE-CCCCEEEEEEEE-CCCCCCCCC
T ss_conf             489632413034667899999988754898786357743787755666776599998-897679998751-344566899


Q ss_pred             --CCCCHHHHHHHHHHHCCCCCCCCEEEEECCC-------CCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEE
Q ss_conf             --3259899999998634136899889996257-------6228999999760895779980697624654564036728
Q gi|254780659|r  125 --LLDDPFRTADKILATCPLKEQADVIVFDFHA-------ETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTG  195 (274)
Q Consensus       125 --~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHa-------EaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTa  195 (274)
                        ...+|..++.+..-...+++++|+|++=-|.       |...+..+++-.+.+.+-+++|=|||++  |.....+.+.
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~D~IV~l~H~g~~~d~~~~~~~~~~la~~~~~~~~~iigGHsH~~--~~~~~d~~~~  248 (322)
T d3c9fa2         171 GTRVTPMAETIHEPWFQEALKHEVDLIIIVGHTPISHNWGEFYQVHQYLRQFFPDTIIQYFGGHSHIR--DFTVFDSLST  248 (322)
T ss_dssp             TEEECCHHHHTTSHHHHHHTTSCCSEEEEECSSCCCTTTCHHHHHHHHHHHHCTTSEEEEEECSSCCE--EEEEEETTEE
T ss_pred             CCEEECHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCC--CCCCCCCCCE
T ss_conf             86893899999999999987479999999816774555442016999999758997789964645664--6431388416


No 7  
>d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]}
Probab=97.02  E-value=0.0041  Score=38.10  Aligned_cols=135  Identities=10%  Similarity=0.095  Sum_probs=81.8

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEE-ECHHHHCCCCHHHHH
Q ss_conf             9269997202768899999980898886099899991700478867899999999837998999-342653022204754
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVIT-TGNHVWDKREALVFS   79 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT-~GNH~wd~kei~~~i   79 (274)
                      |||+++.||=|.  ..++++.|..++++ ++|.||.-|.-.      .+...+.+.+....++. .|||-++........
T Consensus         1 MkI~iiSDiHgn--~~al~~vl~~~~~~-~~D~ii~~GD~~------~~~~~~~l~~~~~~~~~v~GN~D~~~~~~~~~~   71 (165)
T d1s3la_           1 MKIGIMSDTHDH--LPNIRKAIEIFNDE-NVETVIHCGDFV------SLFVIKEFENLNANIIATYGNNDGERCKLKEWL   71 (165)
T ss_dssp             CEEEEECCCTTC--HHHHHHHHHHHHHS-CCSEEEECSCCC------STHHHHHGGGCSSEEEEECCTTCCCHHHHHHHH
T ss_pred             CEEEEEEECCCC--HHHHHHHHHHHHHC-CCCEEEECCCCC------CHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHH
T ss_conf             979999857999--79999999999866-998999999755------788899986347608997151354310466766


Q ss_pred             HHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHH
Q ss_conf             21893897500798887540799984899289999960000588332598999999986341368998899962576228
Q gi|254780659|r   80 QRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTS  159 (274)
Q Consensus        80 ~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTS  159 (274)
                      .....       ....| ... .++. +|.++.++.           ..|....+.+++.                    
T Consensus        72 ~~~~~-------~~~~~-~~~-~~~~-~~~~i~l~H-----------g~~~~~~~~~~~~--------------------  110 (165)
T d1s3la_          72 KDINE-------ENIID-DFI-SVEI-DDLKFFITH-----------GHHQSVLEMAIKS--------------------  110 (165)
T ss_dssp             HHHCT-------TCEEE-SEE-EEEE-TTEEEEEEE-----------SCCHHHHHHHHHH--------------------
T ss_pred             HHHCC-------CCCCC-HHH-CEEE-CCCEEEEEE-----------CCCCCHHHHHHHC--------------------
T ss_conf             54200-------00277-224-0178-893899997-----------9942178888644--------------------


Q ss_pred             HHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEE
Q ss_conf             999999760895779980697624654564036728984
Q gi|254780659|r  160 EKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYIT  198 (274)
Q Consensus       160 EK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiT  198 (274)
                                ..+..++--|||.|-...  . +|+-|+-
T Consensus       111 ----------~~~d~v~~GHtH~~~~~~--~-~~~~~iN  136 (165)
T d1s3la_         111 ----------GLYDVVIYGHTHERVFEE--V-DDVLVIN  136 (165)
T ss_dssp             ----------SCCSEEEEECSSCCEEEE--E-TTEEEEE
T ss_pred             ----------CCCCEEEECCCCCCEEEE--E-CCEEEEE
T ss_conf             ----------798899989868505999--9-9999998


No 8  
>d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=96.76  E-value=0.02  Score=33.57  Aligned_cols=193  Identities=17%  Similarity=0.174  Sum_probs=100.0

Q ss_pred             EEEEEEECCCHHHHHHHHHHHHH-HHHHCCCCEEEECCEEC-CCCC-CCCHHH---HHHH---HHCCCCE-EEECHHHHC
Q ss_conf             26999720276889999998089-88860998999917004-7886-789999---9999---8379989-993426530
Q gi|254780659|r    2 RLLFLGDIVGKTGRSIVYEMLPR-LIRDFQLDFVIANGENS-AGGF-GITEKI---FCEM---METGIDV-ITTGNHVWD   71 (274)
Q Consensus         2 kiLfiGDIvG~~Gr~~v~~~Lp~-l~~~~~~DfvIaNgENa-a~G~-Git~~~---~~~l---~~~GvDv-iT~GNH~wd   71 (274)
                      ++.++||+ |....  -.+.+.. .+...++||||..|.++ +.|. .-....   +.++   +.+.+-+ .+.|||=.+
T Consensus         9 ~F~v~GD~-g~~~~--~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~~~~P~~~~~GNHD~~   85 (312)
T d2qfra2           9 TFGLIGDL-GQSFD--SNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIE   85 (312)
T ss_dssp             EEEEECSC-CSBHH--HHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCGGGTC
T ss_pred             EEEEEEEC-CCCCC--HHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCC
T ss_conf             99999638-99985--4999999997089988999898887678886531589999999988876446489832510025


Q ss_pred             CCC------H-HHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf             222------0-475421893897500798887540799984899289999960000588332598999999986341368
Q gi|254780659|r   72 KRE------A-LVFSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKE  144 (274)
Q Consensus        72 ~ke------i-~~~i~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~  144 (274)
                      ...      - ..|....   --|.|-+. ..+..|..|+. ++..+.+++.  .....+ ...=.+-+++.|+... +.
T Consensus        86 ~~~~~~~~~~~~~~~~~f---~~P~~~~~-~~~~~~Ysf~~-g~v~fi~Lds--~~~~~~-~~~Q~~WL~~~L~~~~-~~  156 (312)
T d2qfra2          86 FAPEINETEPFKPFSYRY---HVPYEASQ-STSPFWYSIKR-ASAHIIVLSS--YSAYGR-GTPQYTWLKKELRKVK-RS  156 (312)
T ss_dssp             CBGGGTBCSTTHHHHHHC---CCCGGGGT-CSSTTSEEEEE-TTEEEEECCT--TSCCST-TSHHHHHHHHHHHTCC-TT
T ss_pred             CCCCCCCCCCCCCHHHHC---CCCCCCCC-CCCCCEEEEEE-CCEEEEEEEC--CCCCCC-HHHHHHHHHHHHHHHH-HC
T ss_conf             565456664554213213---68754567-88885489998-8888997643--556541-6799999999999876-35


Q ss_pred             CCCEEEEECCCCC---------HHH--HHHHH-HHHCCCEEEEEECCCCCCC------------CHH----HHCCCCEEE
Q ss_conf             9988999625762---------289--99999-7608957799806976246------------545----640367289
Q gi|254780659|r  145 QADVIVFDFHAET---------TSE--KQCFA-HFVDSRASLVVGTHTHIPT------------ADA----QILDGGTGY  196 (274)
Q Consensus       145 ~~~~i~VDfHaEa---------TSE--K~A~g-~~lDGrVsaVvGTHTHV~T------------aD~----rILp~GTay  196 (274)
                      .++.+||=+|-=-         ..|  ..+|. .+..-+|.+|+--|.|.=.            .+.    .--|+||-|
T Consensus       157 ~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~~~~~~~~~~~~g~vy  236 (312)
T d2qfra2         157 ETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVY  236 (312)
T ss_dssp             TCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEE
T ss_pred             CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf             88889998056630037788643156899999999970968999836753699720237720246776554568986789


Q ss_pred             EECCCCCCCHH
Q ss_conf             84056013712
Q gi|254780659|r  197 ITDLGMCGDYN  207 (274)
Q Consensus       197 iTDvGMtG~~~  207 (274)
                      |+ +|.-|.+.
T Consensus       237 iv-~G~gG~~~  246 (312)
T d2qfra2         237 IT-IGDAGNYG  246 (312)
T ss_dssp             EE-ECCSCTTS
T ss_pred             EE-ECCCCCCC
T ss_conf             99-77677766


No 9  
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]}
Probab=95.55  E-value=0.084  Score=29.58  Aligned_cols=183  Identities=13%  Similarity=0.027  Sum_probs=89.0

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHH----HHHHHHCCCCEE-EECHHHHCCCCH
Q ss_conf             926999720276889999998089888609989999170047886789999----999983799899-934265302220
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKI----FCEMMETGIDVI-TTGNHVWDKREA   75 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~----~~~l~~~GvDvi-T~GNH~wd~kei   75 (274)
                      ++||.++||=|..  +++++.|...+++ ++|+||.-|.=...|-  ....    .+.|.+.++.++ ..|||=....+-
T Consensus         6 ~~i~~~sd~hg~~--eale~~~~~~~~~-~~D~vv~~GDl~~~~~--~~~~~~~~~~~L~~~~~pv~~i~GNHD~~~~~~   80 (228)
T d1uf3a_           6 RYILATSNPMGDL--EALEKFVKLAPDT-GADAIALIGNLMPKAA--KSRDYAAFFRILSEAHLPTAYVPGPQDAPIWEY   80 (228)
T ss_dssp             CEEEEEECCTTCH--HHHHHHHTHHHHH-TCSEEEEESCSSCTTC--CHHHHHHHHHHHGGGCSCEEEECCTTSCSHHHH
T ss_pred             CEEEEEECCCCCH--HHHHHHHHHHHHC-CCCEEEECCCCCCCCC--CCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHH
T ss_conf             3899995788999--9999999987661-9899998999999976--416899755432034536999966887443212


Q ss_pred             H-HHHHH--CCCEEEECCCCCCCCCCCEEEEECCCCCEEEEE----EEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCE
Q ss_conf             4-75421--893897500798887540799984899289999----9600005883325989999999863413689988
Q gi|254780659|r   76 L-VFSQR--HCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVA----NIMGRVFMNPLLDDPFRTADKILATCPLKEQADV  148 (274)
Q Consensus        76 ~-~~i~~--~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vi----nl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~  148 (274)
                      . ..+..  ....+.-.       ..++ .+. ..+..+.-+    ...+..-.......+......+.+..........
T Consensus        81 ~~~~~~~~~~~~~~~~~-------~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  151 (228)
T d1uf3a_          81 LREAANVELVHPEMRNV-------HETF-TFW-RGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKDYPK  151 (228)
T ss_dssp             HHHHHHHHHHCTTEEEC-------BTSE-EEE-TTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSCSCCE
T ss_pred             HHHHCCCCCCCCCCCCC-------CEEE-EEC-CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf             35532532134421001-------2034-432-68779996077655676740334333357789999998753247766


Q ss_pred             EEEECCCC--------CHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCC
Q ss_conf             99962576--------228999999760895779980697624654564036728984056013
Q gi|254780659|r  149 IVFDFHAE--------TTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCG  204 (274)
Q Consensus       149 i~VDfHaE--------aTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG  204 (274)
                       ++-+|.-        ..|+... ...-+-.+..++-=|||-+    +...+++ ++.+.|+++
T Consensus       152 -il~~H~p~~~~~~~~~~~~~~~-~~~~~~~~~lvl~GH~H~~----~~~~g~~-~~v~pG~~~  208 (228)
T d1uf3a_         152 -IFLFHTMPYHKGLNEQGSHEVA-HLIKTHNPLLVLVAGKGQK----HEMLGAS-WVVVPGDLS  208 (228)
T ss_dssp             -EEEESSCBCBTTTBTTSBHHHH-HHHHHHCCSEEEECCSSCE----EEEETTE-EEEECCBGG
T ss_pred             -EEEEEEECCCCCCCCCCCHHHH-HHHHHCCCCEEEECCCCCC----HHCCCCE-EEEECCCCC
T ss_conf             -9998400157521000409899-8787419849998464566----4020987-999788544


No 10 
>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]}
Probab=95.24  E-value=0.025  Score=32.98  Aligned_cols=71  Identities=21%  Similarity=0.280  Sum_probs=52.6

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCC-------CCHHHHHHHHHCCCCEE-EECHHHHCC
Q ss_conf             9269997202768899999980898886099899991700478867-------89999999983799899-934265302
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFG-------ITEKIFCEMMETGIDVI-TTGNHVWDK   72 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~G-------it~~~~~~l~~~GvDvi-T~GNH~wd~   72 (274)
                      |||++|+||=|..  .++++.|..+++ .++|.+|..|.-...|..       ..++.++.+.+.+..++ ..|||=+..
T Consensus         2 Mki~iiSDiHg~~--~al~~vl~~~~~-~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNhD~~~   78 (184)
T d1su1a_           2 MKLMFASDIHGSL--PATERVLELFAQ-SGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAHKVIAVRGNCDSEV   78 (184)
T ss_dssp             CEEEEECCCTTBH--HHHHHHHHHHHH-HTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTGGGEEECCCTTCCHH
T ss_pred             CEEEEEEECCCCH--HHHHHHHHHHHH-CCCCEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCHH
T ss_conf             6899995158998--999999998855-6998999927602457630344302759999998756995899647777045


Q ss_pred             CC
Q ss_conf             22
Q gi|254780659|r   73 RE   74 (274)
Q Consensus        73 ke   74 (274)
                      .+
T Consensus        79 ~~   80 (184)
T d1su1a_          79 DQ   80 (184)
T ss_dssp             HH
T ss_pred             HH
T ss_conf             54


No 11 
>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.84  E-value=0.14  Score=28.22  Aligned_cols=173  Identities=17%  Similarity=0.203  Sum_probs=87.7

Q ss_pred             CEEEEEEECC-CH---------HHHHHHHHHHHHHHHH-CCCCEEEECCEECCCCCCCCHHHHH---HHH-----HCCCC
Q ss_conf             9269997202-76---------8899999980898886-0998999917004788678999999---998-----37998
Q gi|254780659|r    1 MRLLFLGDIV-GK---------TGRSIVYEMLPRLIRD-FQLDFVIANGENSAGGFGITEKIFC---EMM-----ETGID   61 (274)
Q Consensus         1 MkiLfiGDIv-G~---------~Gr~~v~~~Lp~l~~~-~~~DfvIaNgENaa~G~Git~~~~~---~l~-----~~GvD   61 (274)
                      |||+.|-|+= +.         ..++.+++.+..+++. .++||||..|.-+..|.   +..++   +++     ..++.
T Consensus         5 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g~---~~~~~~~~~~l~~~~~~~~~p   81 (256)
T d2hy1a1           5 YVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE---PAAYRKLRGLVEPFAAQLGAE   81 (256)
T ss_dssp             EEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSCC---HHHHHHHHHHHHHHHHHHTCE
T ss_pred             EEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC---HHHHHHHHHHHHHHHHHCCCC
T ss_conf             89999962711898864136748899999999999843899999998998888887---157899999864345405997


Q ss_pred             E-EEECHHHHCCCC-HHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEE--HHHCCCCCCCCHHHHHHHHH
Q ss_conf             9-993426530222-0475421893897500798887540799984899289999960--00058833259899999998
Q gi|254780659|r   62 V-ITTGNHVWDKRE-ALVFSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIM--GRVFMNPLLDDPFRTADKIL  137 (274)
Q Consensus        62 v-iT~GNH~wd~ke-i~~~i~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~--Gr~fM~~~~d~PF~~~d~~l  137 (274)
                      + .+.|||  |..+ ...++....        +. ....-+ .+.. ++.++..+|-.  +..+-. ..+.-+.-+++.|
T Consensus        82 ~~~v~GNH--D~~~~~~~~~~~~~--------~~-~~~~~~-~~~~-~~~~~~~ldt~~~~~~~g~-~~~~~~~wl~~~L  147 (256)
T d2hy1a1          82 LVWVMGNH--DDRAELRKFLLDEA--------PS-MAPLDR-VCMI-DGLRIIVLDTSVPGHHHGE-IRASQLGWLAEEL  147 (256)
T ss_dssp             EEECCCTT--SCHHHHHHHTTCCC--------CC-CSCCCE-EEEE-TTEEEEECCCBCTTCSSBC-CCHHHHHHHHHHH
T ss_pred             EEEECCCC--CCHHHHHHHHCCCC--------CC-CCCCCE-EEEE-CCCCEEEEEEEECCCCCCC-CCHHHHHHHHHHH
T ss_conf             89976632--22566654210122--------34-565415-8970-4432023311213776773-2488889999998


Q ss_pred             HHCCCCCCCCEEEEECCCC---C-----------HHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEE
Q ss_conf             6341368998899962576---2-----------28999999760895779980697624654564036728984
Q gi|254780659|r  138 ATCPLKEQADVIVFDFHAE---T-----------TSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYIT  198 (274)
Q Consensus       138 ~~~~~~~~~~~i~VDfHaE---a-----------TSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiT  198 (274)
                      ++.   .+...|+ =+|--   .           -+|. -....-.-+|.+++.=|+|.+..   ..-+|.-|++
T Consensus       148 ~~~---~~~~~iv-~~Hhpp~~~~~~~~~~~~~~~~~~-~~~i~~~~~v~~~~~GH~H~~~~---~~~~gi~~~~  214 (256)
T d2hy1a1         148 ATP---APDGTIL-ALHHPPIPSVLDMAVTVELRDQAA-LGRVLRGTDVRAILAGHLHYSTN---ATFVGIPVSV  214 (256)
T ss_dssp             TSC---CTTCEEE-ECSSCSSCCSSHHHHTTSBCCHHH-HHHHHTTSSEEEEEECSSSSCEE---EEETTEEEEE
T ss_pred             HHH---HCCCCEE-EEECCCCCCCCCCCCCCCCCCHHH-HHHHHHCCCCEEEECCCCCHHHC---EEECCEEEEE
T ss_conf             764---2267025-520488554543334323235788-99997456924997453563254---5999999997


No 12 
>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]}
Probab=94.30  E-value=0.18  Score=27.42  Aligned_cols=179  Identities=15%  Similarity=0.134  Sum_probs=89.2

Q ss_pred             CEEEEEEECC-CHH---------HHHHHHHHHHHHHHH-CCCCEEEECCEECCCCCCCCHHHHHH----HHHCCCCE-EE
Q ss_conf             9269997202-768---------899999980898886-09989999170047886789999999----98379989-99
Q gi|254780659|r    1 MRLLFLGDIV-GKT---------GRSIVYEMLPRLIRD-FQLDFVIANGENSAGGFGITEKIFCE----MMETGIDV-IT   64 (274)
Q Consensus         1 MkiLfiGDIv-G~~---------Gr~~v~~~Lp~l~~~-~~~DfvIaNgENaa~G~Git~~~~~~----l~~~GvDv-iT   64 (274)
                      |||+-|.|+= +..         -.+.+++.+..++.. .++|+||..|..+-.|   +++.|+.    |.+.++.+ ++
T Consensus         1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~---~~~~y~~~~~~l~~l~~p~~~i   77 (271)
T d3d03a1           1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCG---RPEEYQVARQILGSLNYPLYLI   77 (271)
T ss_dssp             CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSC---CHHHHHHHHHHHTTCSSCEEEE
T ss_pred             CEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC---CCHHHHHHHHHHHCCCCCEEEE
T ss_conf             9899991575798864202676899999999999983589999999895467288---4226899999875059989999


Q ss_pred             ECHHHHCCCCHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCC--CC-CCHHHHHHHHHHHCC
Q ss_conf             342653022204754218938975007988875407999848992899999600005883--32-598999999986341
Q gi|254780659|r   65 TGNHVWDKREALVFSQRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNP--LL-DDPFRTADKILATCP  141 (274)
Q Consensus        65 ~GNH~wd~kei~~~i~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~--~~-d~PF~~~d~~l~~~~  141 (274)
                      .|||=... ...+++....    + .++......-+ .+.. .+.++..++-  ......  .+ +.-..-+++.|++. 
T Consensus        78 ~GNHD~~~-~~~~~~~~~~----~-~~~~~~~~~~~-~~~~-~~~~~i~ldt--~~~~~~~~~l~~~ql~wL~~~L~~~-  146 (271)
T d3d03a1          78 PGNHDDKA-LFLEYLQPLC----P-QLGSDANNMRC-AVDD-FATRLLFIDS--SRAGTSKGWLTDETISWLEAQLFEG-  146 (271)
T ss_dssp             CCTTSCHH-HHHHHHGGGS----G-GGCSCGGGCCE-EECS-SSSEEEECCC--CCTTCSSBCCCHHHHHHHHHHHHHH-
T ss_pred             ECCCCCHH-HHHHHHHHHH----H-CCCCCCCCCEE-EEEC-CCEEEEECCC--CCCCCCCCEECHHHHHHHHHHHHHH-
T ss_conf             36864267-8888766654----2-03334576337-9943-8747984255--6589876412399998999987641-


Q ss_pred             CCCCCCEEEEECCC-----CCHHHH------HHHHHHHC--CCEEEEEECCCCCCCCHHHHCCCCEEEEE
Q ss_conf             36899889996257-----622899------99997608--95779980697624654564036728984
Q gi|254780659|r  142 LKEQADVIVFDFHA-----ETTSEK------QCFAHFVD--SRASLVVGTHTHIPTADAQILDGGTGYIT  198 (274)
Q Consensus       142 ~~~~~~~i~VDfHa-----EaTSEK------~A~g~~lD--GrVsaVvGTHTHV~TaD~rILp~GTayiT  198 (274)
                        .+.+.+++=.|.     ....++      ..+.-.|+  ..|.+++-=|+|.+.. .+  -+|+-|++
T Consensus       147 --~~~~~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~-~~--~~g~~~~~  211 (271)
T d3d03a1         147 --GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTM-TQ--YRQALIST  211 (271)
T ss_dssp             --TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEE-EE--ETTEEEEE
T ss_pred             --CCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHC-EE--ECCEEEEE
T ss_conf             --3640599954675356865444434335478999997347847998277563460-59--99999998


No 13 
>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=93.34  E-value=0.23  Score=26.71  Aligned_cols=82  Identities=21%  Similarity=0.220  Sum_probs=50.5

Q ss_pred             CEEEEEEECC-CHH----------HHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHH-------HHHHHHHCCCCE
Q ss_conf             9269997202-768----------8999999808988860998999917004788678999-------999998379989
Q gi|254780659|r    1 MRLLFLGDIV-GKT----------GRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEK-------IFCEMMETGIDV   62 (274)
Q Consensus         1 MkiLfiGDIv-G~~----------Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~-------~~~~l~~~GvDv   62 (274)
                      |||+.+.|+= |.+          -.+++++.+...+ +.++|+||..|.-.-++. .+++       ....|...|+.|
T Consensus         1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~-~~~~D~vli~GDlfd~~~-~~~~~~~~~~~~~~~l~~~~i~v   78 (333)
T d1ii7a_           1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAV-QENVDFILIAGDLFHSSR-PSPGTLKKAIALLQIPKEHSIPV   78 (333)
T ss_dssp             CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHH-HTTCSEEEEESCSBSSSS-CCHHHHHHHHHHHHHHHTTTCCE
T ss_pred             CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCCEEEECCCCCCCCC-CCHHHHHHHHHHHHHHHHCCCCE
T ss_conf             9889992375898876732579999999999999998-739999998789888997-99999999999976687539809


Q ss_pred             -EEECHHHHCCC--CHHHHHHHCCC
Q ss_conf             -99342653022--20475421893
Q gi|254780659|r   63 -ITTGNHVWDKR--EALVFSQRHCK   84 (274)
Q Consensus        63 -iT~GNH~wd~k--ei~~~i~~~~~   84 (274)
                       +..|||=+..+  ..++.++....
T Consensus        79 ~~i~GNHD~~~~~~~~~~~~~~~~~  103 (333)
T d1ii7a_          79 FAIEGNHDRTQRGPSVLNLLEDFGL  103 (333)
T ss_dssp             EEECCTTTCCSSSCCHHHHHHHTTS
T ss_pred             EEECCCCCCCCCHHHHHHHHHHCCC
T ss_conf             9967887663220467788985796


No 14 
>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=89.73  E-value=0.35  Score=25.55  Aligned_cols=64  Identities=13%  Similarity=0.164  Sum_probs=43.8

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHH----CCCCEEEECCEECCCCCCCC-HHHHHHHHH----CCCCEEEECHHH
Q ss_conf             9269997202768899999980898886----09989999170047886789-999999983----799899934265
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRD----FQLDFVIANGENSAGGFGIT-EKIFCEMME----TGIDVITTGNHV   69 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~----~~~DfvIaNgENaa~G~Git-~~~~~~l~~----~GvDviT~GNH~   69 (274)
                      .+|..||||=|..  .++++.|..+.++    .++|.+|..|.-...  |.. .+.++.|.+    ..+- +-.|||=
T Consensus         1 v~I~visDiHg~~--~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~--G~~~~evi~~l~~l~~~~~v~-~v~GNHD   73 (251)
T d1nnwa_           1 VYVAVLANIAGNL--PALTAALSRIEEMREEGYEIEKYYILGNIVGL--FPYPKEVIEVIKDLTKKENVK-IIRGKYD   73 (251)
T ss_dssp             CEEEEEECCTTCH--HHHHHHHHHHHHHHHTTCCEEEEEEESCSSSS--SSCHHHHHHHHHHHHHHSCEE-EECCHHH
T ss_pred             CEEEEEECCCCCH--HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC--CCCCHHHHHHHHHHHHCCCEE-EEECCHH
T ss_conf             9899997502499--99999999998763168988689992574799--888189999999876308989-9906477


No 15 
>d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]}
Probab=89.31  E-value=0.13  Score=28.29  Aligned_cols=64  Identities=19%  Similarity=0.212  Sum_probs=47.2

Q ss_pred             EEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHH
Q ss_conf             26999720276889999998089888609989999170047886789999999983799899934265
Q gi|254780659|r    2 RLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHV   69 (274)
Q Consensus         2 kiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~   69 (274)
                      ||++||||=|.  ..++++.|.++......|-+|..|.-...|-- +.++.+.|.+..+-+ -.|||=
T Consensus        14 rI~vIgDIHG~--~~~L~~lL~~i~~~~~~d~lv~lGD~vDrGp~-s~~vl~~l~~~~~~~-i~GNHE   77 (219)
T d1g5ba_          14 NIWVVGDLHGC--YTNLMNKLDTIGFDNKKDLLISVGDLVDRGAE-NVECLELITFPWFRA-VRGNHE   77 (219)
T ss_dssp             CEEEECCCTTC--HHHHHHHHHHHTCCTTTCEEEECSCCSSSSSC-HHHHHGGGGSTTEEE-CCCHHH
T ss_pred             EEEEEEECCCC--HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC-HHHHHHHHHCCCCCC-CCCCHH
T ss_conf             69999820069--99999999973999777779994876355854-789998731432224-467579


No 16 
>d1tqja_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Synechocystis sp. PCC 6803 [TaxId: 1148]}
Probab=89.14  E-value=0.038  Score=31.83  Aligned_cols=58  Identities=17%  Similarity=0.312  Sum_probs=36.3

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH---HHHHHH--HHCCCEEEEEECCCCCCCCHHHHCC
Q ss_conf             25989999999863413689988999625762289---999997--6089577998069762465456403
Q gi|254780659|r  126 LDDPFRTADKILATCPLKEQADVIVFDFHAETTSE---KQCFAH--FVDSRASLVVGTHTHIPTADAQILD  191 (274)
Q Consensus       126 ~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSE---K~A~g~--~lDGrVsaVvGTHTHV~TaD~rILp  191 (274)
                      .++|...++++.+.     .++.+.  ||.|+++.   +..+.+  -..=++..++--.|.+..-.. +++
T Consensus        69 v~~P~~~i~~~~~~-----g~~~i~--~H~E~~~~~~~~~~~~~i~~~g~~~Gial~p~T~~~~l~~-~l~  131 (221)
T d1tqja_          69 IVEPEKYVEDFAKA-----GADIIS--VHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEY-VLP  131 (221)
T ss_dssp             SSSGGGTHHHHHHH-----TCSEEE--EECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTT-TGG
T ss_pred             EECHHHHHHHHHHC-----CCEEEE--EEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH-HHH
T ss_conf             70888989987431-----452799--8622456736689999999779977999648986889999-973


No 17 
>d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.30  E-value=0.059  Score=30.56  Aligned_cols=139  Identities=19%  Similarity=0.238  Sum_probs=76.7

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEE-ECHHHHCCCCHHHHH
Q ss_conf             9269997202768899999980898886099899991700478867899999999837998999-342653022204754
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVIT-TGNHVWDKREALVFS   79 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT-~GNH~wd~kei~~~i   79 (274)
                      ||||.|.|+=|......+...+.++.++.++|.||.-|.-.      +++.++.|.+.+.++.. .|||=|+.       
T Consensus         1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~~~D~Ii~~GDi~------~~e~l~~l~~~~~~v~~V~GN~D~~~-------   67 (182)
T d1z2wa1           1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLC------TKESYDYLKTLAGDVHIVRGDFDENL-------   67 (182)
T ss_dssp             CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCB------SHHHHHHHHHHCSEEEECCCTTCCCT-------
T ss_pred             CEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCC------CHHHHHHHHHHCCCEEEEECCCCCCC-------
T ss_conf             98999912588975014689999984535898899925765------34568988752896599937867665-------


Q ss_pred             HHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHH
Q ss_conf             21893897500798887540799984899289999960000588332598999999986341368998899962576228
Q gi|254780659|r   80 QRHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTS  159 (274)
Q Consensus        80 ~~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTS  159 (274)
                                .+|.      ..+++. .|.++.++.  |.-+. + ...+ ..+.+..+                     
T Consensus        68 ----------~~p~------~~~~~~-~g~~i~~~H--g~~~~-~-~~~~-~~l~~~~~---------------------  104 (182)
T d1z2wa1          68 ----------NYPE------QKVVTV-GQFKIGLIH--GHQVI-P-WGDM-ASLALLQR---------------------  104 (182)
T ss_dssp             ----------TSCS------EEEEEE-TTEEEEEEC--SCCCC-B-TTCH-HHHHHHHH---------------------
T ss_pred             ----------CCCE------EEEEEE-CCCEEEEEE--CCCCC-C-CCCH-HHHHHHHH---------------------
T ss_conf             ----------4223------889998-696999996--88778-8-7788-99999876---------------------


Q ss_pred             HHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCHH
Q ss_conf             999999760895779980697624654564036728984056013712
Q gi|254780659|r  160 EKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCGDYN  207 (274)
Q Consensus       160 EK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG~~~  207 (274)
                               ...+..++-=|||+|... ++  +|+-++--=-.++|++
T Consensus       105 ---------~~~~divi~GHTH~p~~~-~~--~~~~~iNPGSv~~pr~  140 (182)
T d1z2wa1         105 ---------QFDVDILISGHTHKFEAF-EH--ENKFYINPGSATGAYN  140 (182)
T ss_dssp             ---------HHSSSEEECCSSCCCEEE-EE--TTEEEEECCCTTCCCC
T ss_pred             ---------CCCCCEEEECCCCCCEEE-EE--CCEEEEECCCCCCCCC
T ss_conf             ---------257997997876763499-98--9999996998888888


No 18 
>d1rpxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=87.42  E-value=0.044  Score=31.42  Aligned_cols=59  Identities=19%  Similarity=0.387  Sum_probs=38.8

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH---HHHHHH--HHCCCEEEEEECCCCCCCCHHHHCCC
Q ss_conf             25989999999863413689988999625762289---999997--60895779980697624654564036
Q gi|254780659|r  126 LDDPFRTADKILATCPLKEQADVIVFDFHAETTSE---KQCFAH--FVDSRASLVVGTHTHIPTADAQILDG  192 (274)
Q Consensus       126 ~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSE---K~A~g~--~lDGrVsaVvGTHTHV~TaD~rILp~  192 (274)
                      .++|...++++.+.     .++.|.  ||.|+++.   +..+-+  -..=++..++--.|.+..-.. +|+.
T Consensus        77 v~~P~~~i~~~~~~-----g~~~i~--~H~E~~~~~~~~~~i~~ik~~g~k~Gialnp~T~~~~l~~-~l~~  140 (230)
T d1rpxa_          77 IVEPDQRVPDFIKA-----GADIVS--VHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEY-VLDA  140 (230)
T ss_dssp             SSSHHHHHHHHHHT-----TCSEEE--EECSTTTCSCHHHHHHHHHHTTSEEEEEECTTCCGGGGTT-TTTT
T ss_pred             ECCHHHHHHHHHHC-----CCCEEE--EECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHHH
T ss_conf             22066667887532-----562257--7322235305999999999869859999679998799999-9965


No 19 
>d1p0ka_ c.1.4.1 (A:) Isopentenyl-diphosphate delta-isomerase {Bacillus subtilis [TaxId: 1423]}
Probab=86.04  E-value=0.86  Score=23.03  Aligned_cols=44  Identities=14%  Similarity=0.374  Sum_probs=17.8

Q ss_pred             HHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHH
Q ss_conf             9808988860998999917004788678999999998379989993426
Q gi|254780659|r   20 EMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNH   68 (274)
Q Consensus        20 ~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH   68 (274)
                      +.+..+++.++..+++...     |.+.++..+..+.++|+|.|..+||
T Consensus       148 ~~i~~i~~~~~~~vivk~v-----~~~~~~~~a~~~~~~GaD~i~v~~~  191 (329)
T d1p0ka_         148 KRIEQICSRVSVPVIVKEV-----GFGMSKASAGKLYEAGAAAVDIGGY  191 (329)
T ss_dssp             HHHHHHHHHCSSCEEEEEE-----SSCCCHHHHHHHHHHTCSEEEEEC-
T ss_pred             HHHHHHHHHCCCCCEEEEC-----CCCCHHHHHHHHHHCCCCEEEECCC
T ss_conf             9999999975898578863-----7763299999999647999997678


No 20 
>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]}
Probab=84.73  E-value=0.58  Score=24.17  Aligned_cols=66  Identities=18%  Similarity=0.299  Sum_probs=44.9

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCC----------------------------CCCHHHH
Q ss_conf             926999720276889999998089888609989999170047886----------------------------7899999
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGF----------------------------GITEKIF   52 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~----------------------------Git~~~~   52 (274)
                      -|||+|.||=++.  +++.+ |..+..+.++|+||.-|.=...+.                            --..+..
T Consensus         3 ~ri~~isD~h~~~--~~l~~-l~~~~~~~~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~~~~   79 (257)
T d2yvta1           3 RKVLAIKNFKERF--DLLPK-LKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFF   79 (257)
T ss_dssp             CEEEEEECCTTCG--GGHHH-HHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEECCCCCH--HHHHH-HHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHH
T ss_conf             4899994899997--89999-99988565999999915558998888899999975421011431021232045699999


Q ss_pred             HHHHHCCCCE-EEECHHH
Q ss_conf             9998379989-9934265
Q gi|254780659|r   53 CEMMETGIDV-ITTGNHV   69 (274)
Q Consensus        53 ~~l~~~GvDv-iT~GNH~   69 (274)
                      ..|.+.++-+ +..|||=
T Consensus        80 ~~L~~~~~pv~~i~GNHD   97 (257)
T d2yvta1          80 REIGELGVKTFVVPGKND   97 (257)
T ss_dssp             HHHHTTCSEEEEECCTTS
T ss_pred             HHHHHCCCCEEEEECCCC
T ss_conf             999853994899947776


No 21 
>d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]}
Probab=83.33  E-value=1.4  Score=21.58  Aligned_cols=74  Identities=14%  Similarity=0.223  Sum_probs=48.1

Q ss_pred             CEEEEEEECC-----------------CHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCC---CCH----HHHHHHH
Q ss_conf             9269997202-----------------768899999980898886099899991700478867---899----9999998
Q gi|254780659|r    1 MRLLFLGDIV-----------------GKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFG---ITE----KIFCEMM   56 (274)
Q Consensus         1 MkiLfiGDIv-----------------G~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~G---it~----~~~~~l~   56 (274)
                      ++|.+|.|+=                 .+.-...+++.+..+. +.++||||..|-..-++..   -..    +..+.+-
T Consensus         4 f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~-~~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~~~   82 (320)
T d2nxfa1           4 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWR-RERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELD   82 (320)
T ss_dssp             EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHH-HTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHH
T ss_pred             EEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             7999993378888887644454432046778999999999986-479899998898788987313579999999999999


Q ss_pred             HCCCCEE-EECHHHHCCCCH
Q ss_conf             3799899-934265302220
Q gi|254780659|r   57 ETGIDVI-TTGNHVWDKREA   75 (274)
Q Consensus        57 ~~GvDvi-T~GNH~wd~kei   75 (274)
                      ++++.++ +.|||-+.....
T Consensus        83 ~~~~p~~~v~GNHD~~~~~~  102 (320)
T d2nxfa1          83 ACSVDVHHVWGNHEFYNFSR  102 (320)
T ss_dssp             TTCSEEEECCCHHHHHHCCH
T ss_pred             HCCCCEEEECCCCCCCCCCC
T ss_conf             75998899404676554310


No 22 
>d2flia1 c.1.2.2 (A:3-219) D-ribulose-5-phosphate 3-epimerase {Streptococcus pyogenes [TaxId: 1314]}
Probab=82.91  E-value=0.35  Score=25.60  Aligned_cols=57  Identities=19%  Similarity=0.253  Sum_probs=40.3

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH---HHHHHHHCCCEEEEEECCCCCCCCHHHH
Q ss_conf             259899999998634136899889996257622899---9999760895779980697624654564
Q gi|254780659|r  126 LDDPFRTADKILATCPLKEQADVIVFDFHAETTSEK---QCFAHFVDSRASLVVGTHTHIPTADAQI  189 (274)
Q Consensus       126 ~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK---~A~g~~lDGrVsaVvGTHTHV~TaD~rI  189 (274)
                      .++|...++.+.+.     .++.  |=||+|++++-   .....-..-++..++--.|.+......+
T Consensus        68 v~~P~~~i~~~~~~-----ga~~--i~~H~E~~~~~~~~i~~i~~~g~~~Gial~p~T~~~~~~~~l  127 (217)
T d2flia1          68 VVDPERYVEAFAQA-----GADI--MTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLL  127 (217)
T ss_dssp             SSSGGGGHHHHHHH-----TCSE--EEEEGGGCSCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGT
T ss_pred             ECCHHHHHHHHHHC-----CCCE--EEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHH
T ss_conf             35988989999970-----9967--995043445778899999865973899963776554777687


No 23 
>d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=79.55  E-value=2  Score=20.73  Aligned_cols=189  Identities=16%  Similarity=0.224  Sum_probs=90.8

Q ss_pred             CEEEEEEECCC-------HHHHHHHHHHHHHHHHHCCCCEEEECCEEC-CCCCC-CCHHHHHH--------HHHCCCC-E
Q ss_conf             92699972027-------688999999808988860998999917004-78867-89999999--------9837998-9
Q gi|254780659|r    1 MRLLFLGDIVG-------KTGRSIVYEMLPRLIRDFQLDFVIANGENS-AGGFG-ITEKIFCE--------MMETGID-V   62 (274)
Q Consensus         1 MkiLfiGDIvG-------~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENa-a~G~G-it~~~~~~--------l~~~GvD-v   62 (274)
                      +|++.+||.-+       ...-.+..+.+.++.++.++||||..|.++ ..|.. -..+...+        +...++- .
T Consensus         5 ~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~~~~P~~   84 (302)
T d1utea_           5 LRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWH   84 (302)
T ss_dssp             EEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCCEE
T ss_pred             EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf             69999914998997545517899999999999863799899989987777888752079999999987510220488669


Q ss_pred             EEECHHHHCCCCHHH--HHHHCCCEEEECCCCCCCCCCCEEEEECC-CCCEEEEEEEEHHHC-------CCCC---CCC-
Q ss_conf             993426530222047--54218938975007988875407999848-992899999600005-------8833---259-
Q gi|254780659|r   63 ITTGNHVWDKREALV--FSQRHCKFLRPANYPPNTPGNGSGLYCAK-NGSNVLVANIMGRVF-------MNPL---LDD-  128 (274)
Q Consensus        63 iT~GNH~wd~kei~~--~i~~~~~ilRP~N~p~~~PG~G~~i~~~~-~g~ki~Vinl~Gr~f-------M~~~---~d~-  128 (274)
                      .+.|||=|....-..  +....++..    +|..  -... .+... ++..+..+-+--..+       ....   .++ 
T Consensus        85 ~~~GNHD~~~~~~~~~~~~~~~~~~~----~~~~--~~~~-~~~~~~~~~~~~~~~ldt~~~~~~~~~~~~~~~~~~~~~  157 (302)
T d1utea_          85 VLAGNHDHLGNVSAQIAYSKISKRWN----FPSP--YYRL-RFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNL  157 (302)
T ss_dssp             ECCCHHHHHSCHHHHHHGGGTSTTEE----CCSS--SEEE-EEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCSCSCH
T ss_pred             EEECCCCCCCCCCCCCCHHHCCCCCC----CCCC--CCCE-EECCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCC
T ss_conf             85036530135323213000254555----8886--6440-105668898579998266257612344344466654441


Q ss_pred             -----HHHHHHHHHHHCCCCCCCCEEEEECCC---------CCHHH-HHHHHHHHCCCEEEEEECCCCCCCCHHHH-CCC
Q ss_conf             -----899999998634136899889996257---------62289-99999760895779980697624654564-036
Q gi|254780659|r  129 -----PFRTADKILATCPLKEQADVIVFDFHA---------ETTSE-KQCFAHFVDSRASLVVGTHTHIPTADAQI-LDG  192 (274)
Q Consensus       129 -----PF~~~d~~l~~~~~~~~~~~i~VDfHa---------EaTSE-K~A~g~~lDGrVsaVvGTHTHV~TaD~rI-Lp~  192 (274)
                           =..-+++.|++.    ..+..+|=+|-         ..... +...-..-..+|.+|+.-|.|.--   |. -++
T Consensus       158 ~~~~~Q~~WL~~~L~~~----~~~~~iv~~h~~~~~~~~~~~~~~~~~~~~~ll~~~~v~~~~~GH~H~~~---r~~~~~  230 (302)
T d1utea_         158 ALARTQLAWIKKQLAAA----KEDYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQ---YLQDEN  230 (302)
T ss_dssp             HHHHHHHHHHHHHHHHC----CCSEEEEECSSCSSCCSSSCCCHHHHHHTHHHHHHTTCSEEEECSSSSEE---EEECTT
T ss_pred             HHHHHHHHHHHHHHHHH----CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEE---EEECCC
T ss_conf             05899999999998741----14764899942444567777755666666677874595399837973257---774599


Q ss_pred             CEEEEECCCCCC
Q ss_conf             728984056013
Q gi|254780659|r  193 GTGYITDLGMCG  204 (274)
Q Consensus       193 GTayiTDvGMtG  204 (274)
                      ++-|++- |-.|
T Consensus       231 ~~~~i~~-g~g~  241 (302)
T d1utea_         231 GLGFVLS-GAGN  241 (302)
T ss_dssp             CCEEEEE-CBSS
T ss_pred             CCEEEEE-CCCC
T ss_conf             6379984-9887


No 24 
>d1h1ya_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Rice (Oryza sativa) [TaxId: 4530]}
Probab=77.43  E-value=0.32  Score=25.81  Aligned_cols=57  Identities=12%  Similarity=0.202  Sum_probs=34.5

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH--HHHH--HHHHCCCEEEEEECCCCCCCCHHHH
Q ss_conf             25989999999863413689988999625762289--9999--9760895779980697624654564
Q gi|254780659|r  126 LDDPFRTADKILATCPLKEQADVIVFDFHAETTSE--KQCF--AHFVDSRASLVVGTHTHIPTADAQI  189 (274)
Q Consensus       126 ~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSE--K~A~--g~~lDGrVsaVvGTHTHV~TaD~rI  189 (274)
                      ..+|...++.+.+.     .++.|.  ||.|++..  +...  -.-..-++..++--+|.+..-..-+
T Consensus        68 v~~p~~~i~~~~~~-----g~~~I~--~H~E~~~~~~~~~i~~i~~~g~~~Glal~p~t~~~~~~~~l  128 (220)
T d1h1ya_          68 VTNPSDYVEPLAKA-----GASGFT--FHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLV  128 (220)
T ss_dssp             SSCGGGGHHHHHHH-----TCSEEE--EEGGGCTTTHHHHHHHHHHTTCEEEEEECTTSCGGGGHHHH
T ss_pred             HCCHHHHHHHHHHC-----CCCEEE--ECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHH
T ss_conf             51054555776530-----234156--40010101288999999974977232421342156787777


No 25 
>d2iw0a1 c.6.2.3 (A:29-248) Chitin deacetylase {Bean anthracnose fungus (Colletotrichum lindemuthianum) [TaxId: 290576]}
Probab=75.61  E-value=0.35  Score=25.55  Aligned_cols=57  Identities=19%  Similarity=0.191  Sum_probs=36.1

Q ss_pred             HHHHHHHHHHHHCCCCEEEECCEECCCC-CCCCHHHHHHHHHCCCCEEEECHHHHCCCCHH
Q ss_conf             9999808988860998999917004788-67899999999837998999342653022204
Q gi|254780659|r   17 IVYEMLPRLIRDFQLDFVIANGENSAGG-FGITEKIFCEMMETGIDVITTGNHVWDKREAL   76 (274)
Q Consensus        17 ~v~~~Lp~l~~~~~~DfvIaNgENaa~G-~Git~~~~~~l~~~GvDviT~GNH~wd~kei~   76 (274)
                      ...+.|+-|++.--.=-.-++|++.... ..-.++..+++.+.|-   ..|||+|++..+.
T Consensus        27 ~t~~il~~L~~~~i~aTFFv~g~~i~~~~~~~~p~~~~~~~~~Gh---eIgnHt~~H~~~~   84 (220)
T d2iw0a1          27 FTPQLLDILKQNDVRATFFVNGNNWANIEAGSNPDTIRRMRADGH---LVGSHTYAHPDLN   84 (220)
T ss_dssp             THHHHHHHHHHHTCCCEEEECSBSSSBTTSTTHHHHHHHHHHTTC---EEEECCSSCCCGG
T ss_pred             HHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCHHHHHHHHHCCC---EEECCCCCCCCHH
T ss_conf             499999999986997899996554566514449999999983672---7720213565465


No 26 
>d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]}
Probab=75.34  E-value=0.76  Score=23.38  Aligned_cols=142  Identities=14%  Similarity=0.161  Sum_probs=77.8

Q ss_pred             EEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEE-ECHHHHCCCCHHHHHHH
Q ss_conf             69997202768899999980898886099899991700478867899999999837998999-34265302220475421
Q gi|254780659|r    3 LLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVIT-TGNHVWDKREALVFSQR   81 (274)
Q Consensus         3 iLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT-~GNH~wd~kei~~~i~~   81 (274)
                      ||.|+|+=+..-...+...+.++.+.-++|.||..|.=.      +++.++.|.+.+.+++. .|||=.+..+....   
T Consensus         6 IlviSD~H~~~~~~~l~~~~~~~~~~~~vD~ii~~GDi~------~~~~l~~l~~l~~~v~~V~GN~D~~~~~~~~~---   76 (193)
T d2a22a1           6 VLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVC------SQEYVEMLKNITKNVYIVSGDLDSAIFNPDPE---   76 (193)
T ss_dssp             EEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCC------CHHHHHHHHHHCSCEEECCCTTCCSCCBCCGG---
T ss_pred             EEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCC------CHHHHHHHHHHCCCEEEECCCCCCCHHHHHHH---
T ss_conf             999957788865210669999984658999999899999------99999998834998799838877201344578---


Q ss_pred             CCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH
Q ss_conf             89389750079888754079998489928999996000058833259899999998634136899889996257622899
Q gi|254780659|r   82 HCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSEK  161 (274)
Q Consensus        82 ~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK  161 (274)
                               +....|-.  ..++. +|.++.++.-  .-+. + ..+| ..+.++..+                      
T Consensus        77 ---------~~~~lp~~--~~~~~-~~~~i~l~H~--~~~~-~-~~~~-~~l~~~~~~----------------------  117 (193)
T d2a22a1          77 ---------SNGVFPEY--VVVQI-GEFKIGLMHG--NQVL-P-WDDP-GSLEQWQRR----------------------  117 (193)
T ss_dssp             ---------GTBCCCSE--EEEEE-TTEEEEEECS--TTSS-S-TTCH-HHHHHHHHH----------------------
T ss_pred             ---------HHHHCCCC--EEEEE-CCEEEEEEEC--CCCC-C-CCCH-HHHHHHHHH----------------------
T ss_conf             ---------88649950--79998-8899999813--6888-8-9888-999998762----------------------


Q ss_pred             HHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCC
Q ss_conf             9999760895779980697624654564036728984056013
Q gi|254780659|r  162 QCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCG  204 (274)
Q Consensus       162 ~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG  204 (274)
                              ..+..++==|||+|....   -+|+-++- .|-+|
T Consensus       118 --------~~~dvvi~GHTH~~~~~~---~~g~~~iN-PGSvg  148 (193)
T d2a22a1         118 --------LDCDILVTGHTHKLRVFE---KNGKLFLN-PGTAT  148 (193)
T ss_dssp             --------HTCSEEEECSSCCCEEEE---ETTEEEEE-CCCSS
T ss_pred             --------CCCCEEEECCCCCCEEEE---ECCEEEEE-CCCCC
T ss_conf             --------489989986756753899---99999998-99777


No 27 
>d1tqxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Plasmodium falciparum [TaxId: 5833]}
Probab=72.78  E-value=2  Score=20.67  Aligned_cols=57  Identities=11%  Similarity=0.225  Sum_probs=33.3

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHH-----HHHHCCCEEEEEECCCCCCCCHHHH
Q ss_conf             259899999998634136899889996257622899999-----9760895779980697624654564
Q gi|254780659|r  126 LDDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCF-----AHFVDSRASLVVGTHTHIPTADAQI  189 (274)
Q Consensus       126 ~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A~-----g~~lDGrVsaVvGTHTHV~TaD~rI  189 (274)
                      ..+|...++.    +   .++....+=+|+|.++.....     .....-++..++--.|-+..-..-+
T Consensus        70 v~~P~~~i~~----~---~~~~~~~i~~~~~~~~~~~~~~~i~~i~~~g~~~Gial~p~t~~~~~~~~l  131 (221)
T d1tqxa_          70 VEYPEKYVPL----L---KTSNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPIL  131 (221)
T ss_dssp             SSCGGGGGGG----C---TTSSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSCGGGGHHHH
T ss_pred             HHHHHHHHHH----H---HHCCCEEEEEEHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHC
T ss_conf             5531444256----6---515852688512215420036778988755973777512565511102010


No 28 
>d1rd5a_ c.1.2.4 (A:) Trp synthase alpha-subunit {Maize (Zea mays) [TaxId: 4577]}
Probab=69.53  E-value=3.5  Score=19.11  Aligned_cols=48  Identities=19%  Similarity=0.233  Sum_probs=26.9

Q ss_pred             HHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf             9998089888609989999170047886789999999983799899934
Q gi|254780659|r   18 VYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTG   66 (274)
Q Consensus        18 v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~G   66 (274)
                      +++.+.+++++-+.-|| .---.----.-.+.+..+.|-++|+|+|-.|
T Consensus         4 i~~~f~~~~~~~~~~li-~y~~aG~P~~~~~~~~l~~l~~~G~DiiElG   51 (261)
T d1rd5a_           4 VSDTMAALMAKGKTAFI-PYITAGDPDLATTAEALRLLDGCGADVIELG   51 (261)
T ss_dssp             HHHHHHHHHHTTCCEEE-EEEETTSSCHHHHHHHHHHHHHTTCSSEEEE
T ss_pred             HHHHHHHHHHCCCCEEE-EEEECCCCCHHHHHHHHHHHHHCCCCEEEEC
T ss_conf             89999999976997699-9985868987899999999997599999977


No 29 
>d1u6ka1 c.127.1.1 (A:2-283) F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=62.94  E-value=4.6  Score=18.29  Aligned_cols=110  Identities=23%  Similarity=0.322  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHH-CCCCEEEECHHHHCCCCHHHHHHHCCCEEEECCCCC
Q ss_conf             9999998089888609989999170047886789999999983-799899934265302220475421893897500798
Q gi|254780659|r   15 RSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMME-TGIDVITTGNHVWDKREALVFSQRHCKFLRPANYPP   93 (274)
Q Consensus        15 r~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~-~GvDviT~GNH~wd~kei~~~i~~~~~ilRP~N~p~   93 (274)
                      ...+.+.+.+..++|++||+|.-+-|++-   -.|+-+.|+++ +|+-+|--|+-.=-+  ..+-+++            
T Consensus        48 ~e~~~~~~~~~~~~~~pDf~i~isPN~a~---PGP~~ARE~l~~~giP~ivI~D~p~~k--~~d~~~~------------  110 (282)
T d1u6ka1          48 VEAAVEMALDIAEDFEPDFIVYGGPNPAA---PGPSKAREMLADSEYPAVIIGDAPGLK--VKDEMEE------------  110 (282)
T ss_dssp             HHHHHHHHHHHHHHHCCSEEEEECSCTTS---HHHHHHHHHHHTSSSCEEEEEEGGGGG--GHHHHHH------------
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEECCCCCC---CCCHHHHHHHHHCCCCEEEECCCCCHH--HHHHHHH------------
T ss_conf             88899888878885199989997898889---995779999975699879975885254--6899986------------


Q ss_pred             CCCCCCEEEEECCCCCEEEEEEEEH--HHCCCCC--------------CCCHHH----HHHHHHHHCCCCC----CCCEE
Q ss_conf             8875407999848992899999600--0058833--------------259899----9999986341368----99889
Q gi|254780659|r   94 NTPGNGSGLYCAKNGSNVLVANIMG--RVFMNPL--------------LDDPFR----TADKILATCPLKE----QADVI  149 (274)
Q Consensus        94 ~~PG~G~~i~~~~~g~ki~Vinl~G--r~fM~~~--------------~d~PF~----~~d~~l~~~~~~~----~~~~i  149 (274)
                        .|.||.|... + -      ++|  |-|++|.              .--.|+    ++|+++++++.++    +-+-|
T Consensus       111 --~gfGYIi~k~-D-p------MIGArREFLDpvEMA~fNad~~kVLa~tGa~RlvQ~~lD~vi~~v~~Gk~~e~~LP~i  180 (282)
T d1u6ka1         111 --QGLGYILVKP-D-A------MLGARREFLDPVEMAIYNADLMKVLAATGVFRVVQEAFDELIEKAKEDEISENDLPKL  180 (282)
T ss_dssp             --TTCEEEEETT-S-C------CCCCCTTTCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCGGGSCEE
T ss_pred             --CCCCEEEEEC-C-C------CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
T ss_conf             --5885799726-7-6------4442342038899886202599998842199999999999999996577676668806


Q ss_pred             EE
Q ss_conf             99
Q gi|254780659|r  150 VF  151 (274)
Q Consensus       150 ~V  151 (274)
                      ++
T Consensus       181 v~  182 (282)
T d1u6ka1         181 VI  182 (282)
T ss_dssp             EE
T ss_pred             EE
T ss_conf             85


No 30 
>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=60.33  E-value=5.2  Score=17.99  Aligned_cols=88  Identities=13%  Similarity=0.105  Sum_probs=47.0

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH
Q ss_conf             92699972027688999999808988860998999917004788678999999998379989993426530222047542
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQ   80 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~   80 (274)
                      |||+++|-  ..-|..+++..+   +..+.+-.|+.+-++. +.........+...+.|+.++...+  +...++.+.+.
T Consensus         1 Mkiv~~~~--~~~g~~~l~~L~---~~g~~I~~Vvt~~~~~-~~~~~~~~~~~~a~~~~i~~~~~~~--~~~~~~~~~i~   72 (203)
T d2blna2           1 MKTVVFAY--HDMGCLGIEALL---AAGYEISAIFTHTDNP-GEKAFYGSVARLAAERGIPVYAPDN--VNHPLWVERIA   72 (203)
T ss_dssp             CEEEEEEC--HHHHHHHHHHHH---HTTCEEEEEECCCC-------CCCCHHHHHHHHTCCEECCSC--CCSHHHHHHHH
T ss_pred             CEEEEEEC--CHHHHHHHHHHH---HCCCCEEEEECCCCCC-CCCCCCCHHHHHHHHCCCCCEECCC--CCCHHHHHHHH
T ss_conf             93999955--778999999999---7899889998489998-7666658789999985996221121--21012344543


Q ss_pred             H-CCCEEEECCCCCCCC
Q ss_conf             1-893897500798887
Q gi|254780659|r   81 R-HCKFLRPANYPPNTP   96 (274)
Q Consensus        81 ~-~~~ilRP~N~p~~~P   96 (274)
                      + .+.++=-+.|+.-.|
T Consensus        73 ~~~~Dlii~~g~~~ii~   89 (203)
T d2blna2          73 QLSPDVIFSFYYRHLIY   89 (203)
T ss_dssp             HTCCSEEEEESCCSCCC
T ss_pred             HHCCCCEEEEECCCCHH
T ss_conf             20335146541110000


No 31 
>d1geqa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=59.36  E-value=5.4  Score=17.88  Aligned_cols=151  Identities=16%  Similarity=0.131  Sum_probs=70.7

Q ss_pred             HHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCC-CHHHHHHHCCCEEEECCCCCCCC
Q ss_conf             99980898886099899991700478867899999999837998999342653022-20475421893897500798887
Q gi|254780659|r   18 VYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKR-EALVFSQRHCKFLRPANYPPNTP   96 (274)
Q Consensus        18 v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~k-ei~~~i~~~~~ilRP~N~p~~~P   96 (274)
                      +-+.+.++|++.+.-+++----|.---+|+ .+-++++.++|+|.+-.-+--++.. ++.....+..--+-++=-| .+|
T Consensus        68 ~~~~~~~~r~~~~~pivlm~Y~N~i~~~G~-~~f~~~~~~~Gv~GliipDLP~eE~~~~~~~~~~~gl~~I~lvaP-tt~  145 (248)
T d1geqa_          68 AFWIVKEFRRHSSTPIVLMTYYNPIYRAGV-RNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAP-NTP  145 (248)
T ss_dssp             HHHHHHHHHTTCCCCEEEEECHHHHHHHCH-HHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECT-TCC
T ss_pred             HHHHHHHHHHCCCCCEEEEECCCCCCCCCH-HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECC-CCH
T ss_conf             999999986168986799850343333677-788654101672687536784778889876502468526888645-341


Q ss_pred             CCCE-EEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH--HHHHHHHHCCCEE
Q ss_conf             5407-999848992899999600005883325989999999863413689988999625762289--9999976089577
Q gi|254780659|r   97 GNGS-GLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSE--KQCFAHFVDSRAS  173 (274)
Q Consensus        97 G~G~-~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSE--K~A~g~~lDGrVs  173 (274)
                      -.-. .+....+| =+-.+..+|-+..+..+.+   .+.+.+++++.-.+.+ +.|-|==- |.|  +.+..++-||   
T Consensus       146 ~~ri~~i~~~s~g-FiY~vs~~GvTG~~~~~~~---~~~~~v~~vk~~t~~P-v~vGFGI~-~~e~v~~~~~~~ADG---  216 (248)
T d1geqa_         146 DERLKVIDDMTTG-FVYLVSLYGTTGAREEIPK---TAYDLLRRAKRICRNK-VAVGFGVS-KREHVVSLLKEGANG---  216 (248)
T ss_dssp             HHHHHHHHHHCSS-EEEEECCC-------CCCH---HHHHHHHHHHHHCSSC-EEEESCCC-SHHHHHHHHHTTCSE---
T ss_pred             HHHHHHHHHCCCC-EEEEEECCCCCCCCHHHHH---HHHHHHHHHHHHCCCC-EEEECCCC-CHHHHHHHHHCCCCE---
T ss_conf             5788988853887-2899841466542011335---6778888876503641-46613649-999999998659999---


Q ss_pred             EEEECC
Q ss_conf             998069
Q gi|254780659|r  174 LVVGTH  179 (274)
Q Consensus       174 aVvGTH  179 (274)
                      +|+||+
T Consensus       217 vIVGSa  222 (248)
T d1geqa_         217 VVVGSA  222 (248)
T ss_dssp             EEECHH
T ss_pred             EEECHH
T ss_conf             998889


No 32 
>d2cc0a1 c.6.2.3 (A:1-192) Acetyl-xylan esterase {Streptomyces lividans [TaxId: 1916]}
Probab=56.83  E-value=3.6  Score=19.01  Aligned_cols=53  Identities=13%  Similarity=0.192  Sum_probs=35.3

Q ss_pred             HHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHH
Q ss_conf             999808988860998999917004788678999999998379989993426530222047
Q gi|254780659|r   18 VYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALV   77 (274)
Q Consensus        18 v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~   77 (274)
                      ..+.|+.|++..-.=-.-++|+++..    .++..+++.+.|-   ..|||+|++..+..
T Consensus        19 t~~il~~L~~~~v~aTFFv~G~~~~~----~p~~~~~~~~~Gh---eIgnHs~~H~~~~~   71 (192)
T d2cc0a1          19 TQSLLNALRQNGLRATMFNQGQYAAQ----NPSLVRAQVDAGM---WVANHSYTHPHMTQ   71 (192)
T ss_dssp             HHHHHHHHHHTTCCCEEEECHHHHHH----CHHHHHHHHHTTC---EEEECCSSCCCGGG
T ss_pred             HHHHHHHHHHCCCCEEEEEECCCCCC----CCHHHHHHHHHHH---HHHHHHCCCCCHHH
T ss_conf             99999999983981999995645233----7246676764114---87751242864001


No 33 
>d1fs0g_ c.49.2.1 (G:) ATP synthase (F1-ATPase), gamma subunit {Escherichia coli [TaxId: 562]}
Probab=55.68  E-value=1.5  Score=21.42  Aligned_cols=13  Identities=15%  Similarity=0.138  Sum_probs=5.4

Q ss_pred             CHHHHHHHHHHHC
Q ss_conf             9899999998634
Q gi|254780659|r  128 DPFRTADKILATC  140 (274)
Q Consensus       128 ~PF~~~d~~l~~~  140 (274)
                      +-++.+.+.+++.
T Consensus        76 ~i~k~~~~~~~~~   88 (230)
T d1fs0g_          76 NLFKKLLAEMKTW   88 (230)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
T ss_conf             3899999987665


No 34 
>d2c71a1 c.6.2.3 (A:480-683) Xylanase XynA C-terminal domain {Clostridium thermocellum [TaxId: 1515]}
Probab=55.59  E-value=3.7  Score=18.93  Aligned_cols=52  Identities=23%  Similarity=0.454  Sum_probs=32.2

Q ss_pred             HHHHHHHHHHHH-CCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCH
Q ss_conf             999980898886-09989999170047886789999999983799899934265302220
Q gi|254780659|r   17 IVYEMLPRLIRD-FQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREA   75 (274)
Q Consensus        17 ~v~~~Lp~l~~~-~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei   75 (274)
                      ...+.|+.|++. .+.-| -++|+++...   .++..+++.+.|-+   .|||+|.....
T Consensus        15 ~t~~il~~L~~~~i~aTF-Fv~G~~~~~~---~~~~~k~i~~~Ghe---Ig~Ht~~H~~~   67 (204)
T d2c71a1          15 LTARVLDKLDKYNVKATF-MVVGQRVNDS---TAAIIRRMVNSGHE---IGNHSWSYSGM   67 (204)
T ss_dssp             HHHHHHHHHHHHTCCCEE-EECGGGCSHH---HHHHHHHHHHTTCE---EEECCSSSSCC
T ss_pred             CHHHHHHHHHHCCCEEEE-EEECCCCCCC---CHHHHHHHHHCCEE---ECCCCCCCCCH
T ss_conf             499999999986980999-9956230013---89999987505768---70242456455


No 35 
>d1pvna1 c.1.5.1 (A:2-99,A:231-494) Inosine monophosphate dehydrogenase (IMPDH) {Tritrichomonas foetus [TaxId: 5724]}
Probab=53.79  E-value=6.6  Score=17.30  Aligned_cols=42  Identities=21%  Similarity=0.233  Sum_probs=22.7

Q ss_pred             HHHHHHHHHHHCCCCE-EEECCEECCCCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf             9998089888609989-999170047886789999999983799899934
Q gi|254780659|r   18 VYEMLPRLIRDFQLDF-VIANGENSAGGFGITEKIFCEMMETGIDVITTG   66 (274)
Q Consensus        18 v~~~Lp~l~~~~~~Df-vIaNgENaa~G~Git~~~~~~l~~~GvDviT~G   66 (274)
                      +.+.+..+++++.++. ||| | |     =-|++.+++|.++|+|.|--|
T Consensus       138 v~~~i~~ir~~~~~~~~IiA-G-N-----VaT~e~~~~L~~aGaD~vkVG  180 (362)
T d1pvna1         138 QKITIGWIREKYGDKVKVGA-G-N-----IVDGEGFRYLADAGADFIKIG  180 (362)
T ss_dssp             HHHHHHHHHHHHGGGSCEEE-E-E-----ECSHHHHHHHHHHTCSEEEEC
T ss_pred             HHHHHHHHHHHHCCCEEEEC-C-C-----CCCHHHHHHHHHHCCCEEEEC
T ss_conf             88999999886533103421-2-4-----467889999997297579844


No 36 
>d1qapa1 c.1.17.1 (A:130-296) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=52.60  E-value=5.6  Score=17.74  Aligned_cols=22  Identities=36%  Similarity=0.656  Sum_probs=11.2

Q ss_pred             CCCHHHHHHHHHCCCCEEEECH
Q ss_conf             7899999999837998999342
Q gi|254780659|r   46 GITEKIFCEMMETGIDVITTGN   67 (274)
Q Consensus        46 Git~~~~~~l~~~GvDviT~GN   67 (274)
                      ||+.+...+.-+.|||+|.+|-
T Consensus       131 gI~~~ni~~ya~~GVD~IS~ga  152 (167)
T d1qapa1         131 NVTAETLREFAETGVDFISVGA  152 (167)
T ss_dssp             CSCHHHHHHHHHTTCSEEECSH
T ss_pred             CCCHHHHHHHHHCCCCEEECCC
T ss_conf             9888999999974999998884


No 37 
>d1np7a2 c.28.1.1 (A:1-204) Cryptochrome {Synechocystis sp., pcc 6803 [TaxId: 1143]}
Probab=52.31  E-value=2.3  Score=20.30  Aligned_cols=47  Identities=9%  Similarity=0.227  Sum_probs=23.8

Q ss_pred             HHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf             98089888609989999170047886789999999983799899934
Q gi|254780659|r   20 EMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTG   66 (274)
Q Consensus        20 ~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~G   66 (274)
                      +.|++|.++++++-|.+|.|-.....=.-.++.+.|.+.||.+.+--
T Consensus        90 ~~l~~l~~~~~i~~V~~n~~~~~~e~~rd~~v~~~l~~~~i~~~~~~  136 (204)
T d1np7a2          90 QVIPQIAKQINAKTIYYHREVTQEELDVERNLVKQLTILGIEAKGYW  136 (204)
T ss_dssp             HHHHHHHHHTTEEEEEEECCCSHHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred             HHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             99999999850011011113458999999877553113304667515


No 38 
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}
Probab=52.04  E-value=7  Score=17.12  Aligned_cols=65  Identities=8%  Similarity=-0.054  Sum_probs=36.1

Q ss_pred             HHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHH
Q ss_conf             9999998089888609989999170047886789999999983799899934265302220475421
Q gi|254780659|r   15 RSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQR   81 (274)
Q Consensus        15 r~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~   81 (274)
                      ...+++.+..||++..-|..|.=|-+++.+.-.-+++..+|.++|+|.|-..+-  +-.++.+++.+
T Consensus        68 ~~~~~~~~~~l~~~~~~~i~iivGG~~~~~~~~~~~~~~~l~~~Gv~~if~~~t--~~~~~~~~l~~  132 (137)
T d1ccwa_          68 EIDCKGLRQKCDEAGLEGILLYVGGNIVVGKQHWPDVEKRFKDMGYDRVYAPGT--PPEVGIADLKK  132 (137)
T ss_dssp             HHHHTTHHHHHHHTTCTTCEEEEEESCSSSSCCHHHHHHHHHHTTCSEECCTTC--CHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEECCCC--CHHHHHHHHHH
T ss_conf             477999999998731489879994786777646187899999769788989999--99999999999


No 39 
>d1owla2 c.28.1.1 (A:3-204) DNA photolyase {Synechococcus elongatus [TaxId: 32046]}
Probab=51.83  E-value=4  Score=18.70  Aligned_cols=50  Identities=16%  Similarity=0.277  Sum_probs=28.7

Q ss_pred             HHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHH
Q ss_conf             98089888609989999170047886789999999983799899934265
Q gi|254780659|r   20 EMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHV   69 (274)
Q Consensus        20 ~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~   69 (274)
                      +.|++|.++++++-|.+|-|-.....-.-..+.+.+.+.||.+.+-.+|.
T Consensus        80 ~~l~~l~~~~~i~~v~~~~~~~~~~~~rd~~i~~~~~~~~i~~~~~~~~~  129 (202)
T d1owla2          80 HLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAGIRAVQLWDQL  129 (202)
T ss_dssp             HHHHHHHHHTTCSEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEECCSS
T ss_pred             CCCHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf             10011201234422578630540232578877444432233220124121


No 40 
>d2c1ia1 c.6.2.3 (A:268-463) Peptidoglycan GlcNAc deacetylase C-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=51.31  E-value=7.2  Score=17.05  Aligned_cols=52  Identities=21%  Similarity=0.300  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHH
Q ss_conf             99980898886099899991700478867899999999837998999342653022204
Q gi|254780659|r   18 VYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREAL   76 (274)
Q Consensus        18 v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~   76 (274)
                      ..+.|+-|++.-=+=-.-++|.++-.    .++..+++.+.|-   ..|||+|.+....
T Consensus        16 ~~~il~~L~~~~i~aTfFv~g~~~~~----~~~~~~~~~~~Gh---eignHt~~H~~~~   67 (196)
T d2c1ia1          16 TPQVLETLAKYDIKATFFVLGKNVSG----NEDLVKRIKSEGH---VVGNHSWSHPILS   67 (196)
T ss_dssp             HHHHHHHHHHTTCCCEEEECGGGTTT----CHHHHHHHHHTTC---EEEECCSSCCCGG
T ss_pred             HHHHHHHHHHCCCCEEEEEECHHHHH----CCHHHHHHCCCCE---EEECCCCCCCCHH
T ss_conf             99999999986997999997554453----8477886167874---7724556775310


No 41 
>d1jvna1 c.1.2.1 (A:230-552) Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF {Baker's yeast (Saccharomyces cerevisiae), His7 [TaxId: 4932]}
Probab=50.89  E-value=7.3  Score=17.00  Aligned_cols=74  Identities=14%  Similarity=0.188  Sum_probs=43.2

Q ss_pred             EEEEECCC----HHHHHHHHHHHHHHHHHCCCCEEEECCEECCC---CCCC-CHHHHHHHHHCCCCEEEECHHHHCCCCH
Q ss_conf             99972027----68899999980898886099899991700478---8678-9999999983799899934265302220
Q gi|254780659|r    4 LFLGDIVG----KTGRSIVYEMLPRLIRDFQLDFVIANGENSAG---GFGI-TEKIFCEMMETGIDVITTGNHVWDKREA   75 (274)
Q Consensus         4 LfiGDIvG----~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~---G~Gi-t~~~~~~l~~~GvDviT~GNH~wd~kei   75 (274)
                      |.+=|+.+    ...+....+.+.++.++-.+-+.+.-|=.+-.   +.+| ..++|++|+++|+|-+..|..+..++|.
T Consensus        65 L~ivDidas~~~~~~~~~~~~~I~~i~~~~~vPi~vGGGIrsi~di~~~~~~~~e~A~~ll~~GadKVvI~T~ai~~p~~  144 (323)
T d1jvna1          65 VTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKVSIGTDAVYAAEK  144 (323)
T ss_dssp             EEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTCSEEEECHHHHHHHHH
T ss_pred             EEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHCCCCEEEECHHHHHCHHH
T ss_conf             99997868877767774079999863025664699845746388853100002689999997498768725377608477


Q ss_pred             HH
Q ss_conf             47
Q gi|254780659|r   76 LV   77 (274)
Q Consensus        76 ~~   77 (274)
                      +.
T Consensus       145 ~~  146 (323)
T d1jvna1         145 YY  146 (323)
T ss_dssp             HH
T ss_pred             HH
T ss_conf             78


No 42 
>d1c3pa_ c.42.1.2 (A:) HDAC homologue {Aquifex aeolicus [TaxId: 63363]}
Probab=49.17  E-value=7.8  Score=16.83  Aligned_cols=51  Identities=14%  Similarity=0.315  Sum_probs=22.4

Q ss_pred             CEEEEEC---CCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCH
Q ss_conf             8899962---57622899999976089577998069762465456403672898405601371
Q gi|254780659|r  147 DVIVFDF---HAETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCGDY  206 (274)
Q Consensus       147 ~~i~VDf---HaEaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG~~  206 (274)
                      .+.+|||   |+.-|.|    .+|-|.+|--+ -.|-+    +.-..|.||++..++|-....
T Consensus       160 RV~ivD~DvHhGnGtq~----if~~d~~V~~~-SiH~~----~~~~~p~~tG~~~e~G~~~g~  213 (372)
T d1c3pa_         160 RILYIDLDAHHCDGVQE----AFYDTDQVFVL-SLHQS----PEYAFPFEKGFLEEIGEGKGK  213 (372)
T ss_dssp             CEEEEECSSSCCHHHHH----HHTTCSSEEEE-EEEEC----TTTSTTSSSCCTTCCCCGGGT
T ss_pred             CEEEEECCCCCCCCEEE----EEEECCCCCCC-CCCCC----CCCCCCCCCCCCCCCCCCCCC
T ss_conf             44787434567776257----77614775430-00257----777788888772236787665


No 43 
>d1xi3a_ c.1.3.1 (A:) Thiamin phosphate synthase {Archaeon (Pyrococcus furiosus) [TaxId: 2261]}
Probab=47.53  E-value=6.5  Score=17.35  Aligned_cols=32  Identities=19%  Similarity=0.126  Sum_probs=22.3

Q ss_pred             HHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH
Q ss_conf             99999998379989993426530222047542
Q gi|254780659|r   49 EKIFCEMMETGIDVITTGNHVWDKREALVFSQ   80 (274)
Q Consensus        49 ~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~   80 (274)
                      .+..+++++.|+++|-.=...++..|.+++..
T Consensus        20 ~~~v~~~l~~Gv~~vqlR~k~~~~~e~~~~a~   51 (206)
T d1xi3a_          20 VESVREALEGGATAIQMRIKNAPTREMYEIGK   51 (206)
T ss_dssp             HHHHHHHHHTTCSEEEECCCSCCHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH
T ss_conf             99999999869989998489999899999999


No 44 
>d1u3da2 c.28.1.1 (A:13-197) Cryptochrome {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=46.88  E-value=4.7  Score=18.23  Aligned_cols=48  Identities=10%  Similarity=0.016  Sum_probs=21.8

Q ss_pred             HHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHH
Q ss_conf             808988860998999917004788678999999998379989993426
Q gi|254780659|r   21 MLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNH   68 (274)
Q Consensus        21 ~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH   68 (274)
                      .|++|.++++++-|..|-|-.-.+.-.-.++.+.|.+.||.+.+--+|
T Consensus        80 ~l~~l~~~~~i~~v~~n~~~~~~e~~rd~~v~~~l~~~gi~~~~~~~~  127 (185)
T d1u3da2          80 SLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQGIAVRSFNAD  127 (185)
T ss_dssp             HHHHHHHHHTCCEEEEECCCSHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred             HHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEECCCC
T ss_conf             999999851972698850530888988998878899749841435774


No 45 
>d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]}
Probab=46.65  E-value=5  Score=18.10  Aligned_cols=95  Identities=16%  Similarity=0.146  Sum_probs=50.3

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEE---CCCCCCCCHHHHHHHHHCCCCEE---EECHHHHCCCC
Q ss_conf             9269997202768899999980898886099899991700---47886789999999983799899---93426530222
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGEN---SAGGFGITEKIFCEMMETGIDVI---TTGNHVWDKRE   74 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgEN---aa~G~Git~~~~~~l~~~GvDvi---T~GNH~wd~ke   74 (274)
                      ||||.|||++=+            |.....-.  +.++++   ..||.|.  .++..|-.+|+++.   ..||..+ -+.
T Consensus         4 ~kvl~~G~~~~~------------l~~~~~~~--~~~~~~~~~~~GG~~~--NvA~~l~~lG~~~~~i~~vG~D~~-G~~   66 (333)
T d2afba1           4 MKVVTFGEIMLR------------LSPPDHKR--IFQTDSFDVTYGGAEA--NVAAFLAQMGLDAYFVTKLPNNPL-GDA   66 (333)
T ss_dssp             CEEEEESCCEEE------------EECSTTCC--GGGCSEEEEEEECHHH--HHHHHHHHTTSEEEEEEEECSSHH-HHH
T ss_pred             CEEEEECCCEEE------------ECCCCCCC--EEECCEEEEECCCHHH--HHHHHHHHCCCCEEEEEEECCCHH-HHH
T ss_conf             659998772799------------71799875--1223657872497699--999999987998799999689778-999


Q ss_pred             HHHHHHHCC---CEEEECCCCCCCCCCCEEEEECCCCCEEEEEEE
Q ss_conf             047542189---389750079888754079998489928999996
Q gi|254780659|r   75 ALVFSQRHC---KFLRPANYPPNTPGNGSGLYCAKNGSNVLVANI  116 (274)
Q Consensus        75 i~~~i~~~~---~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl  116 (274)
                      +.+++.++.   ..++.-   +..++.-+ +....+|.+..++..
T Consensus        67 i~~~l~~~gi~~~~v~~~---~~~t~~~~-~~~~~~g~~~~~~~~  107 (333)
T d2afba1          67 AAGHLRKFGVKTDYIARG---GNRIGIYF-LEIGASQRPSKVVYD  107 (333)
T ss_dssp             HHHHHHHTTCBCTTEEEC---SSCCCEEE-EECCBTTBCCEEEEE
T ss_pred             HHHHHHHCCCCCEEEEEC---CCCCCEEE-EEECCCCCCCCCCCC
T ss_conf             999765204662267631---56650368-998578663432124


No 46 
>d2tpsa_ c.1.3.1 (A:) Thiamin phosphate synthase {Bacillus subtilis [TaxId: 1423]}
Probab=44.67  E-value=5.7  Score=17.73  Aligned_cols=36  Identities=11%  Similarity=0.159  Sum_probs=24.7

Q ss_pred             EEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHC
Q ss_conf             999917004788678999999998379989993426530
Q gi|254780659|r   33 FVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWD   71 (274)
Q Consensus        33 fvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd   71 (274)
                      +.|.+-++..+-.   ....++.++.|+++|-.=+.-++
T Consensus        20 y~i~~~~~~~~~~---~~~v~~al~~Gv~~iqlR~K~~~   55 (226)
T d2tpsa_          20 YFIMGSNNTKADP---VTVVQKALKGGATLYQFREKGGD   55 (226)
T ss_dssp             EEEECGGGCSSCH---HHHHHHHHHHTCSEEEECCCSTT
T ss_pred             EEEECCCCCCCCH---HHHHHHHHHCCCCEEEECCCCCC
T ss_conf             9998830025388---99999999879979998289965


No 47 
>d1viza_ c.1.4.1 (A:) PcrB protein homolog YerE {Bacillus subtilis [TaxId: 1423]}
Probab=42.26  E-value=9.9  Score=16.15  Aligned_cols=49  Identities=14%  Similarity=0.170  Sum_probs=29.4

Q ss_pred             CCCHHHHHHHHHCCCCEEEECHHHHCCCC----H---HHHHH--HCCCEEEECCCCCCCCC
Q ss_conf             78999999998379989993426530222----0---47542--18938975007988875
Q gi|254780659|r   46 GITEKIFCEMMETGIDVITTGNHVWDKRE----A---LVFSQ--RHCKFLRPANYPPNTPG   97 (274)
Q Consensus        46 Git~~~~~~l~~~GvDviT~GNH~wd~ke----i---~~~i~--~~~~ilRP~N~p~~~PG   97 (274)
                      -.|.++.+.|-++|+|+|-.|   |...-    +   .....  +-|-++-|.+-+.-.+|
T Consensus        19 ~~t~e~i~~l~e~GaDiIElG---fSDpiadg~viq~~~~~~~~~~p~il~~~~~~~~~~~   76 (229)
T d1viza_          19 DLPDEQLEILCESGTDAVIIG---GSDGVTEDNVLRMMSKVRRFLVPCVLEVSAIEAIVPG   76 (229)
T ss_dssp             CCCHHHHHHHHTSCCSEEEEC---C----CHHHHHHHHHHHTTSSSCEEEECSCGGGCCSC
T ss_pred             CCHHHHHHHHHHCCCCEEEEC---CCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEECC
T ss_conf             877999999997098999986---9876565389999998622798889995231013236


No 48 
>d1t64a_ c.42.1.2 (A:) Histone deacetylase 8, HDAC8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.71  E-value=10  Score=16.10  Aligned_cols=49  Identities=22%  Similarity=0.453  Sum_probs=25.2

Q ss_pred             CCEEEEEC---CCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCCCC
Q ss_conf             98899962---576228999999760895779980697624654564036728984056013
Q gi|254780659|r  146 ADVIVFDF---HAETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGMCG  204 (274)
Q Consensus       146 ~~~i~VDf---HaEaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGMtG  204 (274)
                      ..+.+|||   |+.-|.|    .+|-|.||- .+-.|-+    +....| ||.+.+|+|.-.
T Consensus       157 ~RV~iiD~DvHhGnGtq~----iF~~d~~V~-~~SiH~~----~~~~~P-gtg~~~e~G~g~  208 (364)
T d1t64a_         157 ERILYVDLDLHHGDGVED----AFSFTSKVM-TVSLHKF----SPGFFP-GTGDVSDVGLGK  208 (364)
T ss_dssp             SCEEEEECSSSCCHHHHH----HHTTCSSEE-EEEEEEC----CTTCTT-CCCCTTCCCCGG
T ss_pred             CEEEEEECCCCCCCCEEE----EEECCCCCC-CCCCCCC----CCCCCC-CCCCHHCCCCCC
T ss_conf             307998523577776044----420687544-5333455----677788-988731058764


No 49 
>d1qpoa1 c.1.17.1 (A:117-285) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=41.46  E-value=5.3  Score=17.91  Aligned_cols=23  Identities=26%  Similarity=0.485  Sum_probs=13.0

Q ss_pred             CCCHHHHHHHHHCCCCEEEECHH
Q ss_conf             78999999998379989993426
Q gi|254780659|r   46 GITEKIFCEMMETGIDVITTGNH   68 (274)
Q Consensus        46 Git~~~~~~l~~~GvDviT~GNH   68 (274)
                      ||+.+...++-..|||+|.+|-=
T Consensus       134 gI~~~ni~~ya~~GvD~IS~gal  156 (169)
T d1qpoa1         134 GLSLQTAATYAETGVDYLAVGAL  156 (169)
T ss_dssp             SCCTTTHHHHHHTTCSEEECGGG
T ss_pred             CCCHHHHHHHHHCCCCEEECCCC
T ss_conf             97989999999739999987824


No 50 
>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}
Probab=39.88  E-value=9.3  Score=16.32  Aligned_cols=28  Identities=14%  Similarity=0.119  Sum_probs=23.1

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEECHH
Q ss_conf             4788678999999998379989993426
Q gi|254780659|r   41 SAGGFGITEKIFCEMMETGIDVITTGNH   68 (274)
Q Consensus        41 aa~G~Git~~~~~~l~~~GvDviT~GNH   68 (274)
                      |++++||...++++|.+.|.+|+-.++-
T Consensus        16 as~~~GIG~aiA~~la~~Ga~V~i~~~~   43 (256)
T d1ulua_          16 VTNQRSLGFAIAAKLKEAGAEVALSYQA   43 (256)
T ss_dssp             CCCSSSHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             9998669999999999879999998174


No 51 
>d2jdig1 c.49.2.1 (G:1-272) ATP synthase (F1-ATPase), gamma subunit {Cow (Bos taurus) [TaxId: 9913]}
Probab=39.02  E-value=3.5  Score=19.06  Aligned_cols=16  Identities=38%  Similarity=0.802  Sum_probs=9.1

Q ss_pred             ECCCCCCCHHHCCCCC
Q ss_conf             4056013712103547
Q gi|254780659|r  198 TDLGMCGDYNSSIGLD  213 (274)
Q Consensus       198 TDvGMtG~~~SVIG~~  213 (274)
                      +|-|+||+|++-|-..
T Consensus        73 SDrGLcG~fN~~iik~   88 (272)
T d2jdig1          73 SDRGLCGAIHSSVAKQ   88 (272)
T ss_dssp             CSCCCSTTHHHHHC--
T ss_pred             CCCCCCCCCCCCHHHH
T ss_conf             5777777764218999


No 52 
>d1vcfa1 c.1.4.1 (A:23-332) Isopentenyl-diphosphate delta-isomerase {Thermus thermophilus [TaxId: 274]}
Probab=38.10  E-value=11  Score=15.77  Aligned_cols=22  Identities=5%  Similarity=0.069  Sum_probs=12.0

Q ss_pred             HHHHHHHHCCCCEEEECHHHHC
Q ss_conf             9999998379989993426530
Q gi|254780659|r   50 KIFCEMMETGIDVITTGNHVWD   71 (274)
Q Consensus        50 ~~~~~l~~~GvDviT~GNH~wd   71 (274)
                      ..++--.+.|+=..++-.++..
T Consensus        57 ~lA~aA~~~g~~~~~~~~~~~~   78 (310)
T d1vcfa1          57 ALAEAAEALGVGMMLGSGRILL   78 (310)
T ss_dssp             HHHHHHHHHTCEEEEEECHHHH
T ss_pred             HHHHHHHHCCCCEEECCCHHCC
T ss_conf             9999999839976743430130


No 53 
>d1eo1a_ c.55.5.1 (A:) Hypothetical protein MTH1175 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=34.51  E-value=13  Score=15.37  Aligned_cols=34  Identities=24%  Similarity=0.308  Sum_probs=22.2

Q ss_pred             HHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf             898886099899991700478867899999999837998999
Q gi|254780659|r   23 PRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVIT   64 (274)
Q Consensus        23 p~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT   64 (274)
                      +++..++.+|.||++        +|.+..++.|.+.||.++.
T Consensus        58 ~~~l~~~~vd~vi~~--------~iG~~~~~~L~~~GI~v~~   91 (124)
T d1eo1a_          58 AQIIANNGVKAVIAS--------SPGPNAFEVLNELGIKIYR   91 (124)
T ss_dssp             HHHHHHTTCCEEEEC--------CSSHHHHHHHHHHTCEEEE
T ss_pred             HHHHHHCCCCEEEEC--------CCCHHHHHHHHHCCCEEEE
T ss_conf             999998799899989--------8798899999987999998


No 54 
>d1yxya1 c.1.2.5 (A:4-233) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Streptococcus pyogenes [TaxId: 1314]}
Probab=34.14  E-value=13  Score=15.34  Aligned_cols=23  Identities=22%  Similarity=0.081  Sum_probs=18.3

Q ss_pred             CCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf             86789999999983799899934
Q gi|254780659|r   44 GFGITEKIFCEMMETGIDVITTG   66 (274)
Q Consensus        44 G~Git~~~~~~l~~~GvDviT~G   66 (274)
                      -..+..+.++.....|.++|..+
T Consensus        31 ~~~~v~~~A~a~~~~Ga~~i~~~   53 (230)
T d1yxya1          31 TGGIMPLMAKAAQEAGAVGIRAN   53 (230)
T ss_dssp             TCCSHHHHHHHHHHHTCSEEEEE
T ss_pred             CHHHHHHHHHHHHHCCCEEEEEC
T ss_conf             85999999999997899089806


No 55 
>d1gsoa2 c.30.1.1 (A:-2-103) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Escherichia coli [TaxId: 562]}
Probab=33.11  E-value=13  Score=15.36  Aligned_cols=33  Identities=9%  Similarity=-0.037  Sum_probs=18.4

Q ss_pred             HHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHC
Q ss_conf             999999837998999342653022204754218
Q gi|254780659|r   50 KIFCEMMETGIDVITTGNHVWDKREALVFSQRH   82 (274)
Q Consensus        50 ~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~   82 (274)
                      ++.+...+..+|.+--|--..--..+.+++.+.
T Consensus        57 ~i~~~a~~~~idlvviGPE~pL~~Gl~D~l~~~   89 (105)
T d1gsoa2          57 ALLDFAQNEKIDLTIVGPEAPLVKGVVDTFRAA   89 (105)
T ss_dssp             HHHHHHHHTTCSEEEECSHHHHHTTHHHHHHHT
T ss_pred             HHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHC
T ss_conf             999899982968899770888876999999988


No 56 
>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}
Probab=32.20  E-value=11  Score=15.86  Aligned_cols=28  Identities=18%  Similarity=0.032  Sum_probs=24.5

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEECHH
Q ss_conf             4788678999999998379989993426
Q gi|254780659|r   41 SAGGFGITEKIFCEMMETGIDVITTGNH   68 (274)
Q Consensus        41 aa~G~Git~~~~~~l~~~GvDviT~GNH   68 (274)
                      +|+++||...+++.|.+.|.+|+-.+.+
T Consensus        13 aag~~GIG~AiA~~la~~Ga~V~i~~r~   40 (274)
T d2pd4a1          13 VANNKSIAYGIAQSCFNQGATLAFTYLN   40 (274)
T ss_dssp             CCSTTSHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             9998389999999999879999999688


No 57 
>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=32.13  E-value=14  Score=15.13  Aligned_cols=46  Identities=22%  Similarity=0.427  Sum_probs=31.8

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHH
Q ss_conf             92699972027688999999808988860998999917004788678999999998
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMM   56 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~   56 (274)
                      .||.|+||     +++...+.+..+ .+++.+++++.-+    ++.+.++..+.+.
T Consensus         5 l~Ia~VGD-----~~nv~~Sli~~l-~~~g~~v~~~~P~----~~~~~~~~~~~~~   50 (163)
T d1pvva2           5 VKVVYVGD-----GNNVAHSLMIAG-TKLGADVVVATPE----GYEPDEKVIKWAE   50 (163)
T ss_dssp             CEEEEESC-----CCHHHHHHHHHH-HHTTCEEEEECCT----TCCCCHHHHHHHH
T ss_pred             CEEEEECC-----CCHHHHHHHHHH-HHCCCEEEEECCC----CCCCCHHHHHHHH
T ss_conf             99999889-----718999999999-9859948973650----0278768999998


No 58 
>d1ka9f_ c.1.2.1 (F:) Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF {Thermus thermophilus [TaxId: 274]}
Probab=31.40  E-value=15  Score=15.05  Aligned_cols=158  Identities=13%  Similarity=0.110  Sum_probs=87.0

Q ss_pred             EEEEECCCH-HHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCC-CHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHH
Q ss_conf             999720276-88999999808988860998999917004788678-9999999983799899934265302220475421
Q gi|254780659|r    4 LFLGDIVGK-TGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGI-TEKIFCEMMETGIDVITTGNHVWDKREALVFSQR   81 (274)
Q Consensus         4 LfiGDIvG~-~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Gi-t~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~   81 (274)
                      +++=|+-+. .++....+.+.++.++..+-+.+        |-|| +.+.++.++++|+|-+..|..++.+++.+.-+-+
T Consensus        47 i~iiDl~~~~~~~~~~~~~i~~i~~~~~~pi~v--------gGGIrs~e~~~~ll~~Ga~kVii~s~~~~n~~~i~~~~~  118 (251)
T d1ka9f_          47 LVFLDISATHEERAILLDVVARVAERVFIPLTV--------GGGVRSLEDARKLLLSGADKVSVNSAAVRRPELIRELAD  118 (251)
T ss_dssp             EEEEECCSSTTCHHHHHHHHHHHHTTCCSCEEE--------ESSCCSHHHHHHHHHHTCSEEEECHHHHHCTHHHHHHHH
T ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHE--------ECCCCCHHHHHHHHHCCCCEEEECCHHHHCHHHHHHHHH
T ss_conf             999844452123316789999888604851210--------115347888889997489779989445438789999987


Q ss_pred             ---CCCEEEECCCCCCCCCCCEEEEECCCCCEE-------------------EEEEEEHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf             ---893897500798887540799984899289-------------------9999600005883325989999999863
Q gi|254780659|r   82 ---HCKFLRPANYPPNTPGNGSGLYCAKNGSNV-------------------LVANIMGRVFMNPLLDDPFRTADKILAT  139 (274)
Q Consensus        82 ---~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki-------------------~Vinl~Gr~fM~~~~d~PF~~~d~~l~~  139 (274)
                         ...++--..+.... . ++.++. .++++.                   .+++=+.|..|..-.|  |..++++.+.
T Consensus       119 ~~G~q~iv~~id~~~~~-~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~eii~tdi~~dG~~~G~d--~~l~~~i~~~  193 (251)
T d1ka9f_         119 HFGAQAVVLAIDARWRG-D-FPEVHV-AGGRVPTGLHAVEWAVKGVELGAGEILLTSMDRDGTKEGYD--LRLTRMVAEA  193 (251)
T ss_dssp             HHCGGGEEEEEEEEEET-T-EEEEEE-TTTTEEEEEEHHHHHHHHHHHTCCEEEEEETTTTTTCSCCC--HHHHHHHHHH
T ss_pred             HHCCCCCCCCCCHHHCC-C-CEEEEE-CCCEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC--HHHHHHHHHH
T ss_conf             62023322110200022-1-027995-14512078669999987775599889998543457667852--5677789863


Q ss_pred             CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             413689988999625762289999997608957799806976
Q gi|254780659|r  140 CPLKEQADVIVFDFHAETTSEKQCFAHFVDSRASLVVGTHTH  181 (274)
Q Consensus       140 ~~~~~~~~~i~VDfHaEaTSEK~A~g~~lDGrVsaVvGTHTH  181 (274)
                      .    ..++|.  -=+-.+.|-..-... -|-.++++|+==|
T Consensus       194 ~----~~pii~--~GGv~~~~dl~~l~~-~g~~gviig~al~  228 (251)
T d1ka9f_         194 V----GVPVIA--SGGAGRMEHFLEAFQ-AGAEAALAASVFH  228 (251)
T ss_dssp             C----SSCEEE--ESCCCSHHHHHHHHH-TTCSEEEESHHHH
T ss_pred             C----CEEEEE--ECCCCCHHHHHHHHH-CCCCEEEEHHHHH
T ss_conf             1----402999--658899999999997-8997999847978


No 59 
>d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=31.26  E-value=15  Score=15.03  Aligned_cols=58  Identities=26%  Similarity=0.365  Sum_probs=38.4

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHC
Q ss_conf             92699972027688999999808988860998999917004788678999999998379989993426530
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWD   71 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd   71 (274)
                      |||+.|.|+=|.  ..++++.|..+++  ++|.||.-|.....+  ..+      ...++.+ -.|||=|+
T Consensus         4 ~kI~viSD~Hgn--~~al~~vl~~~~~--~~D~iih~GD~~~~~--~~~------~~~~~~~-V~GN~D~~   61 (173)
T d3ck2a1           4 QTIIVMSDSHGD--SLIVEEVRDRYVG--KVDAVFHNGDSELRP--DSP------LWEGIRV-VKGNMDFY   61 (173)
T ss_dssp             EEEEEECCCTTC--HHHHHHHHHHHTT--TSSEEEECSCCCSCT--TCG------GGTTEEE-CCCTTCCS
T ss_pred             CEEEEEECCCCC--HHHHHHHHHHHHC--CCCEEEECCCCCCCC--CCH------HHCCCEE-EECCCCCC
T ss_conf             899999636899--7999999998655--898999788545755--104------5368819-96674234


No 60 
>d2f6ua1 c.1.4.1 (A:1001-1231) (S)-3-O-geranylgeranylglyceryl phosphate synthase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=31.21  E-value=14  Score=15.20  Aligned_cols=22  Identities=18%  Similarity=0.300  Sum_probs=19.7

Q ss_pred             CCCCHHHHHHHHHCCCCEEEEC
Q ss_conf             6789999999983799899934
Q gi|254780659|r   45 FGITEKIFCEMMETGIDVITTG   66 (274)
Q Consensus        45 ~Git~~~~~~l~~~GvDviT~G   66 (274)
                      +-.|.++.+.|-++|+|+|-.|
T Consensus        16 ~~~t~~~i~~l~~~GaD~IElG   37 (231)
T d2f6ua1          16 RTNTDEIIKAVADSGTDAVMIS   37 (231)
T ss_dssp             SCCCHHHHHHHHTTTCSEEEEC
T ss_pred             CCCHHHHHHHHHHCCCCEEEEC
T ss_conf             8328999999997599999984


No 61 
>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}
Probab=31.00  E-value=13  Score=15.38  Aligned_cols=122  Identities=21%  Similarity=0.299  Sum_probs=62.0

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH
Q ss_conf             92699972027688999999808988860998999917004788678999999998379989993426530222047542
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQ   80 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~   80 (274)
                      |||..=|  +||-||-+++..+.+  +..+++.|-+|-   .   + ..+....|+++--=   -|  .|+         
T Consensus         1 ikIgING--fGRIGR~v~R~~~~~--~~~~i~ivaINd---~---~-~~~~~ayLlkyDSv---hG--~~~---------   55 (172)
T d1rm4a1           1 LKVAING--FGRIGRNFLRCWHGR--KDSPLDVVVIND---T---G-GVKQASHLLKYDSI---LG--TFD---------   55 (172)
T ss_dssp             EEEEEEC--CSHHHHHHHHHHHHC--SSCSEEEEEEEC---T---T-CHHHHHHHHHCCTT---TC--SCS---------
T ss_pred             CEEEEEC--CCHHHHHHHHHHHHC--CCCCEEEEEECC---C---C-CHHHHHHHHHCCCC---CC--CCC---------
T ss_conf             9899978--777999999999868--899889999848---9---9-98999999805765---33--346---------


Q ss_pred             HCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH
Q ss_conf             18938975007988875407999848992899999600005883325989999999863413689988999625762289
Q gi|254780659|r   81 RHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSE  160 (274)
Q Consensus        81 ~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSE  160 (274)
                                .+-..-+....+   .+|+++.+.+-     -+| .+-|+...           .+| +++|=.+.-++.
T Consensus        56 ----------~~i~~~~~~~~~---ing~~I~~~~~-----~~p-~~i~W~~~-----------gvD-iViEcTG~f~~~  104 (172)
T d1rm4a1          56 ----------ADVKTAGDSAIS---VDGKVIKVVSD-----RNP-VNLPWGDM-----------GID-LVIEGTGVFVDR  104 (172)
T ss_dssp             ----------SCEEECTTSEEE---ETTEEEEEECC-----SCG-GGSCHHHH-----------TCC-EEEECSSSCCBH
T ss_pred             ----------CEEEECCCCCEE---ECCEEEEEECC-----CCH-HHCCHHHC-----------CCC-EEEECCCEECCH
T ss_conf             ----------506741776337---79999998617-----996-78981031-----------998-999647267558


Q ss_pred             HHHHHHHHCCCEEEEEECC
Q ss_conf             9999976089577998069
Q gi|254780659|r  161 KQCFAHFVDSRASLVVGTH  179 (274)
Q Consensus       161 K~A~g~~lDGrVsaVvGTH  179 (274)
                      ..+ .-||++-+.-|+=|.
T Consensus       105 ~~~-~~hl~~GakkViiSA  122 (172)
T d1rm4a1         105 DGA-GKHLQAGAKKVLITA  122 (172)
T ss_dssp             HHH-HHHHHTTCSCEEESS
T ss_pred             HHH-HHHHHCCCCEEEEEC
T ss_conf             999-888756973687604


No 62 
>d2j13a1 c.6.2.3 (A:1-235) Putative polysaccharide deacetylase BA0424 {Bacillus anthracis [TaxId: 1392]}
Probab=30.88  E-value=15  Score=15.00  Aligned_cols=50  Identities=18%  Similarity=0.306  Sum_probs=31.2

Q ss_pred             HHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHH
Q ss_conf             980898886099899991700478867899999999837998999342653022204
Q gi|254780659|r   20 EMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREAL   76 (274)
Q Consensus        20 ~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~   76 (274)
                      ..|+-|++.--+=-.-++|+++.    -.++..+++.+.|.   ..|||+|.+..+.
T Consensus        62 ~ll~~L~~~~i~ATfFv~g~~~~----~~p~~~~~~~~~Gh---eIg~Ht~~H~~l~  111 (235)
T d2j13a1          62 KILDVLKEKKVPATFFVTGHYIK----TQKDLLLRMKDEGH---IIGNHSWSHPDFT  111 (235)
T ss_dssp             HHHHHHHHHTCCEEEEECHHHHH----HCHHHHHHHHHTTC---EEEECCSSCCCGG
T ss_pred             HHHHHHHHCCCCEEEEEECCCCC----CCHHHHHHHHCCCE---EEEEEECCCCCHH
T ss_conf             99999998499879999267643----38899997643890---8753315777722


No 63 
>d3c10a1 c.42.1.2 (A:515-900) Histone deacetylase 7, HDAC7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.74  E-value=16  Score=14.87  Aligned_cols=65  Identities=14%  Similarity=0.394  Sum_probs=34.3

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCEEEEEC---CCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEEEECCCC
Q ss_conf             2598999999986341368998899962---5762289999997608957799806976246545640367289840560
Q gi|254780659|r  126 LDDPFRTADKILATCPLKEQADVIVFDF---HAETTSEKQCFAHFVDSRASLVVGTHTHIPTADAQILDGGTGYITDLGM  202 (274)
Q Consensus       126 ~d~PF~~~d~~l~~~~~~~~~~~i~VDf---HaEaTSEK~A~g~~lDGrVsaVvGTHTHV~TaD~rILp~GTayiTDvGM  202 (274)
                      ++|.=-++..++++..   --.+.+|||   |+.-|.|    .+|-|.+|-. +-.|-|-.   -...| ||++..|+|.
T Consensus       168 fNdvAiaa~~l~~~~~---~~rV~iiD~DvHhGnGTq~----if~~~~~V~~-~SiH~~~~---~~~~p-~tG~~~e~G~  235 (386)
T d3c10a1         168 FNSVAIACRQLQQQSK---ASKILIVDWDVHHGNGTQQ----TFYQDPSVLY-ISLHRHDD---GNFFP-GSGAVDEVGA  235 (386)
T ss_dssp             SCHHHHHHHHHHHHST---TCCEEEEECSSSCCHHHHH----HHTTCTTEEE-EEEEECTT---TTSTT-CCCCTTCCCC
T ss_pred             CCHHHHHHHHHHHHCC---CCCCEEEECCCCCCCCEEE----EEECCCCCCC-CCCCCCCC---CCCCC-CCCCHHHCCC
T ss_conf             3288999999986214---6774377424678876046----7642554335-43335665---45678-8898876388


No 64 
>d1ny1a_ c.6.2.3 (A:) Probable polysaccharide deacetylase PdaA {Bacillus subtilis [TaxId: 1423]}
Probab=28.81  E-value=16  Score=14.77  Aligned_cols=51  Identities=16%  Similarity=0.190  Sum_probs=30.8

Q ss_pred             HHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHH
Q ss_conf             9980898886099899991700478867899999999837998999342653022204
Q gi|254780659|r   19 YEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREAL   76 (274)
Q Consensus        19 ~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~   76 (274)
                      .+.|+.|++.--.=-.-++|.+.-    -.++.++++.+.|.   +.|||+|.++...
T Consensus        59 ~~il~~L~~~~i~aTfFv~g~~~~----~~~~~~~~~~~~Gh---eIgnHt~~H~~~~  109 (235)
T d1ny1a_          59 PKVLDVLKKHRVTGTFFVTGHFVK----DQPQLIKRMSDEGH---IIGNHSFHHPDLT  109 (235)
T ss_dssp             HHHHHHHHHTTCCCEEEECHHHHH----HCHHHHHHHHHTTC---EEEECCSSCCCGG
T ss_pred             HHHHHHHHHCCCCEEEECCHHHHH----HCHHHHHHHHHCCE---EEECCCCCCCCCC
T ss_conf             999999997699879713288787----69899998762384---8942505467823


No 65 
>d1vrda1 c.1.5.1 (A:1-85,A:213-457) Inosine monophosphate dehydrogenase (IMPDH) {Thermotoga maritima [TaxId: 2336]}
Probab=28.49  E-value=16  Score=14.73  Aligned_cols=15  Identities=27%  Similarity=0.558  Sum_probs=7.6

Q ss_pred             HHHHHHHHCCCCEEE
Q ss_conf             999999837998999
Q gi|254780659|r   50 KIFCEMMETGIDVIT   64 (274)
Q Consensus        50 ~~~~~l~~~GvDviT   64 (274)
                      +.++.+.++|+|+|+
T Consensus       101 e~~~~li~agvd~iv  115 (330)
T d1vrda1         101 ERVEKLVKAGVDVIV  115 (330)
T ss_dssp             HHHHHHHHTTCSEEE
T ss_pred             HHHHHHHHCCCCEEE
T ss_conf             999999987998899


No 66 
>d1o4ua1 c.1.17.1 (A:104-273) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=27.83  E-value=4.4  Score=18.41  Aligned_cols=55  Identities=11%  Similarity=0.045  Sum_probs=28.8

Q ss_pred             HHHHHHHHHHCCC-CEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHC-CCCHHHHHHH
Q ss_conf             9980898886099-8999917004788678999999998379989993426530-2220475421
Q gi|254780659|r   19 YEMLPRLIRDFQL-DFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWD-KREALVFSQR   81 (274)
Q Consensus        19 ~~~Lp~l~~~~~~-DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd-~kei~~~i~~   81 (274)
                      .+.+..+|+.... -.+.+-.||        .+.+.+..++|+|+|-+-|-.-+ =+++...+..
T Consensus        65 ~~~~~~~~~~~~~~~~I~VEv~~--------~~e~~~a~~~g~d~i~LDn~~pe~~k~~~~~lk~  121 (170)
T d1o4ua1          65 ERAVQEVRKIIPFTTKIEVEVEN--------LEDALRAVEAGADIVMLDNLSPEEVKDISRRIKD  121 (170)
T ss_dssp             HHHHHHHHTTSCTTSCEEEEESS--------HHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCEEEEEECC--------HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf             88999988517988569997083--------9999998845755999857572667679999986


No 67 
>d1pvda1 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.57  E-value=2.7  Score=19.80  Aligned_cols=52  Identities=8%  Similarity=0.013  Sum_probs=29.5

Q ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHH
Q ss_conf             8999999808988860998999917004788678999999998379989993426
Q gi|254780659|r   14 GRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNH   68 (274)
Q Consensus        14 Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH   68 (274)
                      -...+.+.+..|++-.+| .+|+-++=  .-+|...+.-+-.-..|+=|+|+...
T Consensus        16 ~~~~i~~~~~~l~~AkrP-vii~G~g~--~~~~a~~~l~~lae~~~~Pv~tt~~g   67 (179)
T d1pvda1          16 EKEVIDTILALVKDAKNP-VILADACC--SRHDVKAETKKLIDLTQFPAFVTPMG   67 (179)
T ss_dssp             HHHHHHHHHHHHHHCSSE-EEEECGGG--TTTSTHHHHHHHHHHHCCCEEECGGG
T ss_pred             CHHHHHHHHHHHHHCCCC-EEEEECCC--CHHHHHHHHHHHHHHHCCEEEECCCC
T ss_conf             699999999999857897-89985550--14340799999999627538854555


No 68 
>d1ujpa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Thermus thermophilus [TaxId: 274]}
Probab=26.55  E-value=18  Score=14.51  Aligned_cols=152  Identities=14%  Similarity=0.132  Sum_probs=90.6

Q ss_pred             HHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCC-CHHHHHHHCCCEEEECCCCCCCC
Q ss_conf             99980898886099899991700478867899999999837998999342653022-20475421893897500798887
Q gi|254780659|r   18 VYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKR-EALVFSQRHCKFLRPANYPPNTP   96 (274)
Q Consensus        18 v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~k-ei~~~i~~~~~ilRP~N~p~~~P   96 (274)
                      +.+.+.++|++++.-+|+--.-|----+|+ .+-++++.++|||.+-.=+--++.. ++.+...+..-=+-++= ++.+|
T Consensus        79 ~~~~~~~~r~~~~~pivlm~Y~N~i~~~G~-~~F~~~~~~aGvdGliipDLP~ee~~~~~~~~~~~gl~~I~lv-sPtT~  156 (271)
T d1ujpa_          79 ALELVREVRALTEKPLFLMTYLNPVLAWGP-ERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLL-APTST  156 (271)
T ss_dssp             HHHHHHHHHHHCCSCEEEECCHHHHHHHCH-HHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEE-CTTCC
T ss_pred             HHHHHHHHHCCCCCCEEEEEECHHHHHCCC-HHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEECC-CCCCC
T ss_conf             789899875046776799962002341780-3676777634964674243046667888877631464502103-77760


Q ss_pred             CC-CEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEE
Q ss_conf             54-07999848992899999600005883325989999999863413689988999625762289999997608957799
Q gi|254780659|r   97 GN-GSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSEKQCFAHFVDSRASLV  175 (274)
Q Consensus        97 G~-G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSEK~A~g~~lDGrVsaV  175 (274)
                      -. =-.+....+|. +=++.++|-+..+..+  | ..+.+.+++++...+.+ +.|-|-= .|.|-.+...+.||   +|
T Consensus       157 ~eRi~~i~~~s~GF-IY~Vs~~GvTG~~~~~--~-~~~~~~i~~ik~~t~~P-v~vGFGI-s~~e~v~~~~~ADG---vI  227 (271)
T d1ujpa_         157 DARIATVVRHATGF-VYAVSVTGVTGMRERL--P-EEVKDLVRRIKARTALP-VAVGFGV-SGKATAAQAAVADG---VV  227 (271)
T ss_dssp             HHHHHHHHTTCCSC-EEEECC---------------CCHHHHHHHHTTCCSC-EEEESCC-CSHHHHHHHTTSSE---EE
T ss_pred             HHHHHHHHHHCCCH-HHHHCCCCCCCCCCCC--H-HHHHHHHHHHHCCCCCC-EEEECCC-CCHHHHHHHCCCCE---EE
T ss_conf             68999999848312-1120356766754333--1-77999987651156687-5874787-98899987377998---99


Q ss_pred             EECCC
Q ss_conf             80697
Q gi|254780659|r  176 VGTHT  180 (274)
Q Consensus       176 vGTHT  180 (274)
                      |||+-
T Consensus       228 VGSAi  232 (271)
T d1ujpa_         228 VGSAL  232 (271)
T ss_dssp             ECHHH
T ss_pred             ECHHH
T ss_conf             86899


No 69 
>d1qopa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Salmonella typhimurium [TaxId: 90371]}
Probab=25.74  E-value=18  Score=14.42  Aligned_cols=45  Identities=20%  Similarity=0.316  Sum_probs=23.6

Q ss_pred             HHHHHHHHHHHCCCCEE---EECCEECCCCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf             99980898886099899---99170047886789999999983799899934
Q gi|254780659|r   18 VYEMLPRLIRDFQLDFV---IANGENSAGGFGITEKIFCEMMETGIDVITTG   66 (274)
Q Consensus        18 v~~~Lp~l~~~~~~Dfv---IaNgENaa~G~Git~~~~~~l~~~GvDviT~G   66 (274)
                      +++.+.++|++.+.-||   .+.--    ..-.|.++.+.|-+.|+|+|-.|
T Consensus         4 i~~~f~~lk~~~~~ali~y~t~G~P----~~~~~~~~~~~l~~~GaDiiElG   51 (267)
T d1qopa_           4 YENLFAQLNDRREGAFVPFVTLGDP----GIEQSLKIIDTLIDAGADALELG   51 (267)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEETTSS----CHHHHHHHHHHHHHTTCSSEEEE
T ss_pred             HHHHHHHHHHCCCCEEEEEEECCCC----CHHHHHHHHHHHHHCCCCEEEEC
T ss_conf             9999999997599448998818479----87999999999987699999978


No 70 
>d2czda1 c.1.2.3 (A:1-206) Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) {Pyrococcus horikoshii [TaxId: 53953]}
Probab=25.67  E-value=18  Score=14.41  Aligned_cols=29  Identities=17%  Similarity=0.324  Sum_probs=20.4

Q ss_pred             HHHHHHHHHCCCCEEEECHHHHCCCCHHHHH
Q ss_conf             9999999837998999342653022204754
Q gi|254780659|r   49 EKIFCEMMETGIDVITTGNHVWDKREALVFS   79 (274)
Q Consensus        49 ~~~~~~l~~~GvDviT~GNH~wd~kei~~~i   79 (274)
                      ...++.++++|+|.+|-  |..--+|.+.-.
T Consensus        68 ~~~~~~~~~~gad~~Tv--h~~~g~~~i~~~   96 (206)
T d2czda1          68 RLIARKVFGAGADYVIV--HTFVGRDSVMAV   96 (206)
T ss_dssp             HHHHHHHHHTTCSEEEE--ESTTCHHHHHHH
T ss_pred             HHEEHHHCCCCCCEEEE--EECCCHHHHHHH
T ss_conf             00001111544417876--400338888776


No 71 
>d1j9ba_ c.47.1.12 (A:) Arsenate reductase ArsC {Escherichia coli [TaxId: 562]}
Probab=25.49  E-value=15  Score=14.94  Aligned_cols=76  Identities=12%  Similarity=0.152  Sum_probs=51.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHH-CCCC---EEEECHHHHCC----------CC
Q ss_conf             0276889999998089888609989999170047886789999999983-7998---99934265302----------22
Q gi|254780659|r    9 IVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMME-TGID---VITTGNHVWDK----------RE   74 (274)
Q Consensus         9 IvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~-~GvD---viT~GNH~wd~----------ke   74 (274)
                      |++.|.+...++.|.-|+ +.+++|.+.|--.    .+++++...++++ .|.+   .+-...+.|.+          .+
T Consensus         4 iY~~p~Cs~srkal~~L~-~~~i~~~~idy~k----~pls~~eL~~ll~~lg~~~~~Li~~~~~~~k~l~l~~~~ls~~e   78 (138)
T d1j9ba_           4 IYHNPACGTSRNTLEMIR-NSGTEPTIILYLE----NPPSRDELVKLIADMGISVRALLRKNVEPYEQLGLAEDKFTDDQ   78 (138)
T ss_dssp             EECCTTCHHHHHHHHHHH-HTTCCCEEECTTT----SCCCHHHHHHHHHHHTSCHHHHBCCSSHHHHHTTTTSSCCCHHH
T ss_pred             EEECCCCHHHHHHHHHHH-HCCCCEEEEEECC----CCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHCCCCCCCCCHHH
T ss_conf             998999988999999999-7799759986215----79999999999987268999998703735655478744599999


Q ss_pred             HHHHHHHCCCEE-EEC
Q ss_conf             047542189389-750
Q gi|254780659|r   75 ALVFSQRHCKFL-RPA   89 (274)
Q Consensus        75 i~~~i~~~~~il-RP~   89 (274)
                      ++++|.++|.+| ||.
T Consensus        79 ~i~ll~~~P~LikRPI   94 (138)
T d1j9ba_          79 LIDFMLQHPILINRPI   94 (138)
T ss_dssp             HHHHHHHSGGGBCSCE
T ss_pred             HHHHHHHCCHHEECCE
T ss_conf             9999985931076678


No 72 
>d1j9ja_ c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga maritima [TaxId: 2336]}
Probab=25.14  E-value=19  Score=14.35  Aligned_cols=46  Identities=30%  Similarity=0.416  Sum_probs=31.6

Q ss_pred             CEEEEE-EECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCH
Q ss_conf             926999-7202768899999980898886099899991700478867899
Q gi|254780659|r    1 MRLLFL-GDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITE   49 (274)
Q Consensus         1 MkiLfi-GDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~   49 (274)
                      ||||.- -|=+-.||.+++.+.|.   +.+.+-.|.=..|.|+-|..||-
T Consensus         1 M~ILltNDDGi~s~gl~~L~~~l~---~~~~V~vvAP~~~~S~~g~ait~   47 (247)
T d1j9ja_           1 MRILVTNDDGIQSKGIIVLAELLS---EEHEVFVVAPDKERSATGHSITI   47 (247)
T ss_dssp             CEEEEECSSCTTCHHHHHHHHHHT---TTSEEEEEEESSCCTTCTTCCCC
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHH---CCCEEEEEECCCCCCCCCCCCCC
T ss_conf             959997379989767999999986---59919999469987477125667


No 73 
>d1qo2a_ c.1.2.1 (A:) Phosphoribosylformimino-5-aminoimidazole carboxamide ribotite isomerase HisA {Thermotoga maritima [TaxId: 2336]}
Probab=24.85  E-value=19  Score=14.31  Aligned_cols=38  Identities=16%  Similarity=0.113  Sum_probs=31.7

Q ss_pred             CCCC-CHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHH
Q ss_conf             8678-9999999983799899934265302220475421
Q gi|254780659|r   44 GFGI-TEKIFCEMMETGIDVITTGNHVWDKREALVFSQR   81 (274)
Q Consensus        44 G~Gi-t~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~   81 (274)
                      |-|| +.+.++++++.|+|-+..+...+..++....+.+
T Consensus        79 gGGI~s~~~~~~~~~~Ga~kVvi~s~~~~~~~~~~~~~~  117 (241)
T d1qo2a_          79 GGGIRSLDYAEKLRKLGYRRQIVSSKVLEDPSFLKSLRE  117 (241)
T ss_dssp             ESSCCSHHHHHHHHHTTCCEEEECHHHHHCTTHHHHHHT
T ss_pred             HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHCC
T ss_conf             232100000111123333268427523357122122203


No 74 
>d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.68  E-value=19  Score=14.29  Aligned_cols=27  Identities=15%  Similarity=0.064  Sum_probs=14.4

Q ss_pred             EEEECCCCCCCCCCCEEEEECCCCCEEEE
Q ss_conf             89750079888754079998489928999
Q gi|254780659|r   85 FLRPANYPPNTPGNGSGLYCAKNGSNVLV  113 (274)
Q Consensus        85 ilRP~N~p~~~PG~G~~i~~~~~g~ki~V  113 (274)
                      .+++.+-. ..||.-...++..+ .+|.-
T Consensus       150 ~~~~~~aG-HilGsa~~~I~~~~-~~Ivy  176 (514)
T d2i7xa1         150 TLLAYNAG-VCPGGSIWCISTYS-EKLVY  176 (514)
T ss_dssp             EEEEEECS-SSTTCEEEEEECSS-CEEEE
T ss_pred             EEEECCCC-CCCCCEEEEEEECC-EEEEE
T ss_conf             99971277-77776699999799-69999


No 75 
>d1zfja1 c.1.5.1 (A:2-94,A:221-492) Inosine monophosphate dehydrogenase (IMPDH) {Streptococcus pyogenes [TaxId: 1314]}
Probab=24.59  E-value=19  Score=14.28  Aligned_cols=14  Identities=29%  Similarity=0.399  Sum_probs=6.0

Q ss_pred             HHHHHHHHCCCCEE
Q ss_conf             99999983799899
Q gi|254780659|r   50 KIFCEMMETGIDVI   63 (274)
Q Consensus        50 ~~~~~l~~~GvDvi   63 (274)
                      +.++.|.++|+|+|
T Consensus       110 er~~~l~~agvd~i  123 (365)
T d1zfja1         110 ERAEALFEAGADAI  123 (365)
T ss_dssp             HHHHHHHHHTCSEE
T ss_pred             HHHHHHHHCCCCEE
T ss_conf             89999998699889


No 76 
>d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.33  E-value=20  Score=14.25  Aligned_cols=44  Identities=16%  Similarity=0.287  Sum_probs=28.9

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHH
Q ss_conf             926999720276889999998089888609989999170047886789999999
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCE   54 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~   54 (274)
                      .+|.|+||+     ++.+.+.+. +-.+++.+++++.-.    ++-..++..++
T Consensus         5 l~I~~vGD~-----~nV~~Sli~-~~~~~g~~~~~~~P~----~~~p~~~~~~~   48 (170)
T d1otha2           5 LTLSWIGDG-----NNILHSIMM-SAAKFGMHLQAATPK----GYEPDASVTKL   48 (170)
T ss_dssp             CEEEEESCS-----SHHHHHHHT-TTGGGTCEEEEECCT----TCCCCHHHHHH
T ss_pred             CEEEEECCC-----HHHHHHHHH-HHHHCCCEEEEEECC----CCCCCHHHHHH
T ss_conf             999998375-----648999999-999869979997343----24786688999


No 77 
>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}
Probab=22.93  E-value=19  Score=14.34  Aligned_cols=134  Identities=17%  Similarity=0.219  Sum_probs=64.8

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHH
Q ss_conf             92699972027688999999808988860998999917004788678999999998379989993426530222047542
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQ   80 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~   80 (274)
                      |||..=|  +||-||-+++..+.+-...-+++.|-+|--+      ...+....|+++-==     --.|+.+       
T Consensus         3 ikigING--FGRIGR~vlR~~~~~~~~~~~i~iv~Ind~~------~~~~~~ayLlkyDSv-----hG~~~~~-------   62 (190)
T d1k3ta1           3 IKVGING--FGRIGRMVFQALCEDGLLGTEIDVVAVVDMN------TDAEYFAYQMRYDTV-----HGKFKYE-------   62 (190)
T ss_dssp             EEEEEEC--CSHHHHHHHHHHHHTTCBTTTEEEEEEEESC------CCHHHHHHHHHEETT-----TEECSSC-------
T ss_pred             EEEEEEC--CCHHHHHHHHHHHHCCCCCCCEEEEEEECCC------CCHHHHHHHHHCCCC-----CCCCCCE-------
T ss_conf             6999978--8769999999999757789975999985699------888899998614441-----3577743-------


Q ss_pred             HCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH
Q ss_conf             18938975007988875407999848992899999600005883325989999999863413689988999625762289
Q gi|254780659|r   81 RHCKFLRPANYPPNTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILATCPLKEQADVIVFDFHAETTSE  160 (274)
Q Consensus        81 ~~~~ilRP~N~p~~~PG~G~~i~~~~~g~ki~Vinl~Gr~fM~~~~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSE  160 (274)
                          +----+.+ ..-+....+   .+|.++..+.-    .-+| .+.|+...           ++| +++|=.+..++.
T Consensus        63 ----v~~~~~~~-~~~~~~~~i---~~g~~i~~~~~----~~~p-~~i~W~~~-----------gvD-iViEcTG~f~~~  117 (190)
T d1k3ta1          63 ----VTTTKSSP-SVAKDDTLV---VNGHRILCVKA----QRNP-ADLPWGKL-----------GVE-YVIESTGLFTAK  117 (190)
T ss_dssp             ----EEEECSST-TCSSCCEEE---ETTEEEEEEEC----CSCG-GGSCHHHH-----------TCC-EEEECSSSCCBH
T ss_pred             ----EEECCCCC-CCCCCCCEE---ECCCEEEECCC----CCCH-HHCCHHHC-----------CCC-EEEEECCCCCCC
T ss_conf             ----89716753-222245268---85966885146----7994-68987463-----------975-999824322454


Q ss_pred             HHHHHHHHCCCEEEEEECCC
Q ss_conf             99999760895779980697
Q gi|254780659|r  161 KQCFAHFVDSRASLVVGTHT  180 (274)
Q Consensus       161 K~A~g~~lDGrVsaVvGTHT  180 (274)
                      +.|..|. ++-+.-|+=|..
T Consensus       118 ~~a~~hl-~~GakkViiSAP  136 (190)
T d1k3ta1         118 AAAEGHL-RGGARKVVISAP  136 (190)
T ss_dssp             HHHTHHH-HTTCSEEEESSC
T ss_pred             CCCHHHC-CCCCCEEEECCC
T ss_conf             3210010-467503552367


No 78 
>d1q6oa_ c.1.2.3 (A:) 3-keto-L-gulonate 6-phosphate decarboxylase {Escherichia coli [TaxId: 562]}
Probab=22.41  E-value=6.4  Score=17.38  Aligned_cols=28  Identities=11%  Similarity=-0.018  Sum_probs=13.5

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHH
Q ss_conf             25989999999863413689988999625762289
Q gi|254780659|r  126 LDDPFRTADKILATCPLKEQADVIVFDFHAETTSE  160 (274)
Q Consensus       126 ~d~PF~~~d~~l~~~~~~~~~~~i~VDfHaEaTSE  160 (274)
                      .|.|....+...+     ..+|.+  -+|+++..|
T Consensus        64 ~d~~~~~~~~~~~-----~gad~v--tvh~~~g~~   91 (213)
T d1q6oa_          64 ADAGKILSRMCFE-----ANADWV--TVICCADIN   91 (213)
T ss_dssp             CSCHHHHHHHHHH-----TTCSEE--EEETTSCHH
T ss_pred             CCCHHHHHHHHHH-----CCCCEE--EEECCCCCH
T ss_conf             4515788899998-----099999--980357816


No 79 
>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}
Probab=22.23  E-value=21  Score=13.99  Aligned_cols=48  Identities=19%  Similarity=0.236  Sum_probs=30.0

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHC
Q ss_conf             9269997202768899999980898886099899991700478867899999999837
Q gi|254780659|r    1 MRLLFLGDIVGKTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMET   58 (274)
Q Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~   58 (274)
                      |||..=|  +||-||-.++..+.+   ..+.++.|+.-...+     ..+....|+++
T Consensus         2 ikigING--fGRIGR~v~R~~~~~---~~~~~~~vvaINd~~-----~~~~~ayLlky   49 (173)
T d1obfo1           2 IRVAING--YGRIGRNILRAHYEG---GKSHDIEIVAINDLG-----DPKTNAHLTRY   49 (173)
T ss_dssp             EEEEEEC--CSHHHHHHHHHHHHT---TSCSSEEEEEEECSS-----CHHHHHHHHHE
T ss_pred             EEEEEEC--CCHHHHHHHHHHHHC---CCCCCEEEEEECCCC-----CHHHHHHHHCC
T ss_conf             6999989--758999999999867---988976999973787-----76888776413


No 80 
>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}
Probab=21.88  E-value=19  Score=14.33  Aligned_cols=26  Identities=23%  Similarity=0.184  Sum_probs=22.0

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf             47886789999999983799899934
Q gi|254780659|r   41 SAGGFGITEKIFCEMMETGIDVITTG   66 (274)
Q Consensus        41 aa~G~Git~~~~~~l~~~GvDviT~G   66 (274)
                      +|++.||...+++.|.+.|.+|+=++
T Consensus        14 aag~~GIG~aiA~~la~~Ga~Vil~~   39 (268)
T d2h7ma1          14 IITDSSIAFHIARVAQEQGAQLVLTG   39 (268)
T ss_dssp             CSSTTCHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf             99997799999999998699999996


No 81 
>d1scza_ c.43.1.1 (A:) Dihydrolipoamide succinyltransferase {Escherichia coli [TaxId: 562]}
Probab=21.22  E-value=18  Score=14.51  Aligned_cols=17  Identities=41%  Similarity=0.577  Sum_probs=14.9

Q ss_pred             CCCCEEEEECCCCCCCH
Q ss_conf             03672898405601371
Q gi|254780659|r  190 LDGGTGYITDLGMCGDY  206 (274)
Q Consensus       190 Lp~GTayiTDvGMtG~~  206 (274)
                      |.+||..+|.+||.|..
T Consensus       144 ~~ggTfTISNlG~~g~~  160 (233)
T d1scza_         144 LTGGNFTITNGGVFGSL  160 (233)
T ss_dssp             HSCCSEEEEEGGGGTCC
T ss_pred             HCCCCEEEECCCCCCCE
T ss_conf             57874799757664540


No 82 
>d2nzug1 c.93.1.1 (G:58-332) Glucose-resistance amylase regulator CcpA, C-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=21.08  E-value=23  Score=13.84  Aligned_cols=72  Identities=6%  Similarity=0.080  Sum_probs=41.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHCCCEE
Q ss_conf             688999999808988860998999917004788678999999998379989993426530222047542189389
Q gi|254780659|r   12 KTGRSIVYEMLPRLIRDFQLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALVFSQRHCKFL   86 (274)
Q Consensus        12 ~~Gr~~v~~~Lp~l~~~~~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~~i~~~~~il   86 (274)
                      .|=-..+.+.+.+.-++++.++++.+.++...   ...+..+.+...++|.+-.-....+......+......++
T Consensus        15 ~~f~~~~~~gi~~~~~~~g~~~~~~~~~~~~~---~e~~~i~~~~~~~vdgii~~~~~~~~~~~~~l~~~~~pvv   86 (275)
T d2nzug1          15 NIFYAELARGIEDIATMYKYNIILSNSDQNQD---KELHLLNNMLGKQVDGIIFMSGNVTEEHVEELKKSPVPVV   86 (275)
T ss_dssp             SHHHHHHHHHHHHHHHHTTCEEEEEECTTCHH---HHHHHHHHHHTTCCSEEEECCSCCCHHHHHHHHHCSSCEE
T ss_pred             CHHHHHHHHHHHHHHHHCCCEEEEEECCCCHH---HHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCCC
T ss_conf             98999999999999998699899997899979---9999999998408750320452000478999752254433


No 83 
>d2b4ga1 c.1.4.1 (A:2-313) Dihydroorotate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}
Probab=20.74  E-value=23  Score=13.79  Aligned_cols=28  Identities=21%  Similarity=0.178  Sum_probs=23.1

Q ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEECHH
Q ss_conf             4788678999999998379989993426
Q gi|254780659|r   41 SAGGFGITEKIFCEMMETGIDVITTGNH   68 (274)
Q Consensus        41 aa~G~Git~~~~~~l~~~GvDviT~GNH   68 (274)
                      ||+.++-+.+....+.++|...++++-=
T Consensus        18 aaG~~~~~~~~~~~~~~~g~g~vv~kti   45 (312)
T d2b4ga1          18 AAGVLCTTEEDLRRMTESESGSLIGKSC   45 (312)
T ss_dssp             CTTSSCSSHHHHHHHHHSSCSCEEEEEE
T ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEECCC
T ss_conf             7688898999999999769878993853


No 84 
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=20.18  E-value=24  Score=13.71  Aligned_cols=105  Identities=13%  Similarity=0.121  Sum_probs=60.9

Q ss_pred             EEEEEEECC-CHHHHHHHHHHHHHHHHHC---CCCEEEECCEECCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHH
Q ss_conf             269997202-7688999999808988860---998999917004788678999999998379989993426530222047
Q gi|254780659|r    2 RLLFLGDIV-GKTGRSIVYEMLPRLIRDF---QLDFVIANGENSAGGFGITEKIFCEMMETGIDVITTGNHVWDKREALV   77 (274)
Q Consensus         2 kiLfiGDIv-G~~Gr~~v~~~Lp~l~~~~---~~DfvIaNgENaa~G~Git~~~~~~l~~~GvDviT~GNH~wd~kei~~   77 (274)
                      .+||+|-+. .+=|.+.+-+.+..|+++.   ++.|+|+- +    |..-.....+.+.+.-.+.+-.... .+..++..
T Consensus        34 ~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G-~----g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~  107 (196)
T d2bfwa1          34 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIG-K----GDPELEGWARSLEEKHGNVKVITEM-LSREFVRE  107 (196)
T ss_dssp             EEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEEC-C----BCHHHHHHHHHHHHHCTTEEEECSC-CCHHHHHH
T ss_pred             EEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEE-E----CCCCHHHHHHHHHHCCCEEEEEEEC-CCCCCCHH
T ss_conf             8999768881104999999998864112578881899996-1----3552134543322113115775302-33211000


Q ss_pred             HHHHCCCEEEECCCCCCCCCCCEEEEEC-CCCCEEEEEEE
Q ss_conf             5421893897500798887540799984-89928999996
Q gi|254780659|r   78 FSQRHCKFLRPANYPPNTPGNGSGLYCA-KNGSNVLVANI  116 (274)
Q Consensus        78 ~i~~~~~ilRP~N~p~~~PG~G~~i~~~-~~g~ki~Vinl  116 (274)
                      ++...+-++-|..+ ++.|..   +++. ..|..+.+.+.
T Consensus       108 ~~~~~di~v~ps~~-e~~~~~---~~Eam~~G~pvI~~~~  143 (196)
T d2bfwa1         108 LYGSVDFVIIPSYF-EPFGLV---ALEAMCLGAIPIASAV  143 (196)
T ss_dssp             HHTTCSEEEECCSC-CSSCHH---HHHHHHTTCEEEEESC
T ss_pred             CCCCCCCCCCCCCC-CCCCCC---CHHHHHCCCEEEECCC
T ss_conf             01232334432221-123322---0133314860465178


Done!