RPSBLAST alignment for GI: 254780659 and conserved domain: smart00854

>gnl|CDD|129087 smart00854, PGA_cap, Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. Length = 239

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 52/222 (23%), Positives = 80/222 (36%), Gaps = 45/222 (20%)

Query: 2   RLLFLGDI-----VGKTGRSIVYEMLPRLIRDFQLDFVIAN--------GENSAGGFGIT 48
            L F+GD+     V K   S  +  +  L+R    D  I N        G  ++G     
Sbjct: 1   TLSFVGDVMLGRGVYKADFSPPFAGVKPLLR--AADLAIGNLETPITGSGSPASGKKYPN 58

Query: 49  ----EKIFCEMMETGIDVITTG-NHVWDK-REALVFSQRHCK-----------FLRPANY 91
                +    +   G DV++   NH  D   E L+ +                 L  A  
Sbjct: 59  FRAPPENAAALKAAGFDVVSLANNHSLDYGEEGLLDTLAALDAAGIAHVGAGRNLAEARK 118

Query: 92  PP--NTPGNGSGLYCAKNGSNVLVANIMGRVFMNPLLDDPFRTADKILAT-CPLKEQADV 148
           P      G    L     G+N   A    R  +  L   P    +KILA     +++ADV
Sbjct: 119 PAIVEVKGIKIALLAYTYGTNNGWAASKDRPGVALL---PDLDREKILADIARARKKADV 175

Query: 149 IVFDFH------AETTSEKQCFAH-FVDSRASLVVGTHTHIP 183
           ++   H       E T E++  AH  +D+ A +V+G H H+ 
Sbjct: 176 VIVSLHWGVEYQYEPTDEQRELAHALIDAGADVVIGHHPHVL 217