HHsearch results for GI: 254780660 and protein with PDBid: 1mw7_A
>1mw7_A Hypothetical protein HP0162; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Helicobacter pylori} SCOP: e.39.1.1
Probab=100.00 E-value=0 Score=572.96 Aligned_cols=231 Identities=33% Similarity=0.434 Sum_probs=220.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 12655646775578889799999999999998189994148999999999996688878999999850377666640236
Q gi|254780660|r 6 QFKNIMHRKERKDALKSKIFSKLSREITVSAKLSGQNPLENPRLRLAIQNAKNQSMPKENIERAIKKAGSDDLGNYTNIR 85 (244)
Q Consensus 6 KW~nIkh~K~~~D~~k~k~f~k~~keI~~A~k~gG~dp~~N~~L~~ai~~Ak~~~mPk~~Ie~aIkk~~~~~~~~~~~~~ 85 (244)
+|+++||+|+++|++|||+|+||+|+|++|||+|||||+.|||||+||++||++||||++|||||+|+++.+ ++|++++
T Consensus 4 ~~~~~k~~k~~~d~~rsk~f~kl~reI~vA~k~GG~DP~~N~~L~~ai~~Ak~~nmPkd~IerAIkk~~~~~-~~~~e~~ 82 (240)
T 1mw7_A 4 AFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKE-GNLSEIT 82 (240)
T ss_dssp -----------------CCHHHHHHHHHHHHHTTCSCGGGCHHHHHHHHHHHHHTCCHHHHHHHHHHTTSTT-CCCEEEE
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC-CCCEEEE
T ss_conf 588898776440788889999999999999971899977299999999999983999899999998505577-8808999
Q ss_pred EEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHC-CCCCCCCCCCHHHHHHCCEEEECCCC-----CCCHHHHHHHHCCC
Q ss_conf 7865059939999994463023589989876425-68314788604568644727970677-----53013667751268
Q gi|254780660|r 86 YEGYGPEGVAIIIEALTDNRNRTASSIRSIFTKA-NGSLGSTGSTTRFFEQIGEIIYHSNI-----GDSNLAMEVAIESD 159 (244)
Q Consensus 86 yEg~gP~gvaiiVe~lTDN~nRt~~~vr~~f~K~-gG~lg~~Gsv~~~F~~~G~i~~~~~~-----~d~d~~~e~aie~g 159 (244)
|||||||||+|||||||||+|||+++||++|+|+ ||+||++|||+|||+|+|+|.++++. .++|.+++.+||+|
T Consensus 83 YEg~gP~GvaiiVe~lTDN~nRt~~~vR~~f~K~~Gg~l~~~GSV~~~F~rkG~i~~~~~~~~~~~~~~d~~~~~aie~G 162 (240)
T 1mw7_A 83 YEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYG 162 (240)
T ss_dssp EEEEETTTEEEEEEEEESCHHHHHHHHHHHHTTSTTCEEECTTTTTTSEEEEEEEEEEHHHHHHTTCCHHHHHHHHGGGT
T ss_pred EEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEECCCCCCHHHCCHHHHHHHHHHCC
T ss_conf 99987997499999957975567999999998628955466785479999758999767741021047778877765047
Q ss_pred CCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 7522346882599964320134566542025674222178603761024898999999999987523888131102562
Q gi|254780660|r 160 AFEVLFEDQEYIFYCDFNNVGLTSKKLEEKIGEAQSIKVIWKPLNYIRLSNADKVKSIIKMIENLEDDDDVQSVYSNLE 238 (244)
Q Consensus 160 a~Dv~~~d~~~~i~~~~~~~~~v~~~Le~~~~~~~~sei~~~P~~~V~l~d~e~~~~~~klie~Led~DDVq~VytN~~ 238 (244)
|+||+.+++.++|+|+|++|..|+++|++.++.+.+++++|+|+++|+|++ |+++++.+|+|.|||+||||+||||++
T Consensus 163 aeDve~~e~~~~i~~~~~~~~~v~~~Le~~~~~~~~ael~~ip~~~Vel~~-e~~~~~~kLid~Lee~DDVq~VytN~e 240 (240)
T 1mw7_A 163 LEELEEVEDKIIIRGDYNSFKLLNEGFESLKLPILKASLQRIATTPIELND-EQMELTEKLLDRIEDDDDVVALYTNIE 240 (240)
T ss_dssp EEEEEEETTEEEEEEEGGGHHHHHHHHHHTTCCCSEEEEEEEESSCBCCCH-HHHHHHHHHHHHHHTSTTEEEEEESBC
T ss_pred CCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEECCH-HHHHHHHHHHHHHHCCCCCCEEEECCC
T ss_conf 410123687306733147689999999864776002478994288353499-999999999998755257360511789