HHSEARCH alignment of GI: 254780660 and SCOP domain: d1lfpa_

Alignment
>d1lfpa_ e.39.1.1 (A:) Hypothetical protein aq1575 {Aquifex aeolicus [TaxId: 63363]}
Probab=100.00  E-value=0  Score=628.73  Aligned_cols=240  Identities=39%  Similarity=0.621  Sum_probs=234.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC-CCCCCCE
Q ss_conf             112655646775578889799999999999998189994148999999999996688878999999850377-6666402
Q gi|254780660|r    5 SQFKNIMHRKERKDALKSKIFSKLSREITVSAKLSGQNPLENPRLRLAIQNAKNQSMPKENIERAIKKAGSD-DLGNYTN   83 (244)
Q Consensus         5 sKW~nIkh~K~~~D~~k~k~f~k~~keI~~A~k~gG~dp~~N~~L~~ai~~Ak~~~mPk~~Ie~aIkk~~~~-~~~~~~~   83 (244)
                      ||||||||+||++|++|||+|+||+|+|++|||+|||||+.|||||+||++||++||||++|||||+||.|. +..+|++
T Consensus         1 SkW~nIkh~K~~~D~~r~k~f~k~~r~I~~A~k~GG~DP~~N~~L~~ai~~Ak~~nmPk~~Ie~AIkk~~g~~~~~~~~~   80 (243)
T d1lfpa_           1 SHWAQIKHKKAKVDAQRGKLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKKANMPWENIERAIKKGAGELEGEQFEE   80 (243)
T ss_dssp             CCSCCSSSSSSCTTTSHHHHHHHHHHHHHHHHHHHCSCGGGCHHHHHHHHHHHHTTCCHHHHHHHHHHHHSCSSSCCCEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEE
T ss_conf             97324666888988999999999999999999807999760999999999998807968899999985333456566569


Q ss_pred             EEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCEEEECCCCCCCHHHHHHHHCCCCCCC
Q ss_conf             36786505993999999446302358998987642568314788604568644727970677530136677512687522
Q gi|254780660|r   84 IRYEGYGPEGVAIIIEALTDNRNRTASSIRSIFTKANGSLGSTGSTTRFFEQIGEIIYHSNIGDSNLAMEVAIESDAFEV  163 (244)
Q Consensus        84 ~~yEg~gP~gvaiiVe~lTDN~nRt~~~vr~~f~K~gG~lg~~Gsv~~~F~~~G~i~~~~~~~d~d~~~e~aie~ga~Dv  163 (244)
                      ++|||||||||+|||||||||+|||+++|||+|+|+||+||++|||+|||+|+|+|.++.+..++|.+++.++|+||+|+
T Consensus        81 ~~yEg~gP~GvaiiVe~lTDN~nRt~~~vr~~f~K~gG~l~~~GsV~~~F~~kG~i~~~~~~~~ed~l~~~~ie~gaed~  160 (243)
T d1lfpa_          81 VIYEGYAPGGVAVMVLATTDNRNRTTSEVRHVFTKHGGNLGASGCVSYLFERKGYIEVPAKEVSEEELLEKAIEVGAEDV  160 (243)
T ss_dssp             EEEEEEETTTEEEEEEEEESCHHHHHHHHHHHHHHTTCEECCTTSSGGGEEEEEEEEEEGGGSCHHHHHHHHHHHTCSEE
T ss_pred             EEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEECCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf             99988846984899998424156568999999976388464354103465120101246676436777777764020000


Q ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             34688259996432013456654202567422217860376102489899999999998752388813110256266243
Q gi|254780660|r  164 LFEDQEYIFYCDFNNVGLTSKKLEEKIGEAQSIKVIWKPLNYIRLSNADKVKSIIKMIENLEDDDDVQSVYSNLEIADDI  243 (244)
Q Consensus       164 ~~~d~~~~i~~~~~~~~~v~~~Le~~~~~~~~sei~~~P~~~V~l~d~e~~~~~~klie~Led~DDVq~VytN~~i~eei  243 (244)
                      +.+++.++|+|+|++|.+|+++|++.++++.+++|+|+|+++|+|+++|+++++.+|++.|||+||||+||||++|+||+
T Consensus       161 e~~~~~~~i~~~~~~l~~v~~~Le~~g~~i~~sei~~~P~~~v~l~dee~~~kv~kLid~Led~DDVq~Vy~N~ei~de~  240 (243)
T d1lfpa_         161 QPGEEVHIIYTVPEELYEVKENLEKLGVPIEKAQITWKPISTVQINDEETAQKVIKLLNALEELDDVQQVIANFEIPEEI  240 (243)
T ss_dssp             ECCSSEEEEEECGGGHHHHHHHHHTTTCCCSEEEEEEEESSCEECCCHHHHHHHHHHHHHHHTSTTEEEEEECEECCSCC
T ss_pred             CCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHCCEEEECCCCEECCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHH
T ss_conf             02555541011678889999889863887100220584378341587999999999999864422700154768549888


Q ss_pred             C
Q ss_conf             9
Q gi|254780660|r  244 I  244 (244)
Q Consensus       244 l  244 (244)
                      |
T Consensus       241 l  241 (243)
T d1lfpa_         241 L  241 (243)
T ss_dssp             S
T ss_pred             H
T ss_conf             6


SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: YebC-like
superfamily: YebC-like
family: YebC-like
domain: Hypothetical protein aq1575
species: Aquifex aeolicus [TaxId: 63363]